HHsearch results for GI: 254780770 and protein with PDBid: 2f41_A
>2f41_A Transcription factor FAPR; 'HOT-DOG' fold, gene regulation; 2.50A {Bacillus subtilis} SCOP: d.38.1.5
Probab=99.37 E-value=4e-12 Score=91.82 Aligned_cols=110 Identities=12% Similarity=0.119 Sum_probs=86.2
Q ss_pred EEEEEEEEEECCCEEEEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEE
Q ss_conf 54789999846974999998268883131347999502256699998634634544329977630267752364136002
Q gi|254780770|r 27 LLVDKVVNIQRDESAIGIKNVTFNEPHFMGHFPGRPVMPGVLILEGMAQTAGAICAIHNGFDQYAPPYLMSIDKARFRKP 106 (161)
Q Consensus 27 l~ID~i~~~~~g~~~~g~k~v~~~e~ff~gHFp~~PvmPGvLliE~maQ~~~~l~~~~~~~~~~~~~~l~~i~~~kF~~~ 106 (161)
-+|+++++++||+++.+.++++.+++++.+++..-+++++ +++.++..+. +...++....+++|++|
T Consensus 6 e~ig~ii~~~~g~~a~~~~~v~~~~~~~~~g~~hGg~i~~------lad~~~~~a~-------~~~~~vt~~~~i~F~~p 72 (121)
T 2f41_A 6 EVIGEIIDLELDDQAISILEIKQEHVFSRNQIARGHHLFA------QANSLAVAVI-------DDELALTASADIRFTRQ 72 (121)
T ss_dssp CCSSEEEEEETTTEEEEEEECCGGGBCSTTCBBCHHHHHH------HHHHHHHHTC----------CCCEEEEEEEECSC
T ss_pred HHCCEEEEEECCCEEEEEEECCHHHHCCCCCCCCHHHHHH------HHHHHHHHHC-------CCCCEEEEEEEEEEEEC
T ss_conf 9509289997892399997168899257998137559999------9999999864-------98619999978899665
Q ss_pred EEECCEEEEEEEEEEEECC--EEEEEEEEEECCEEEEEEEEEEEE
Q ss_conf 2128889999999972077--799999999999999989999998
Q gi|254780770|r 107 VFPGDRLEYHVNKVRNRVD--LWKFQCCAKVENTVVAEAEICAMV 149 (161)
Q Consensus 107 V~PGd~L~i~~~i~~~~~~--~~~~~~~~~v~~~~va~a~l~~~i 149 (161)
|.|||+|++++++.+..+. .+.++++.++++++|++|+++++.
T Consensus 73 v~~Gd~l~~~a~v~~~~~~~~~~~v~v~~~~~~~~V~~G~f~~y~ 117 (121)
T 2f41_A 73 VKQGERVVAKAKVTAVEKEKGRTVVEVNSYVGEEIVFSGRFDMYR 117 (121)
T ss_dssp CBTTCEEEEEEEEEEECSSSSCEEEEEEEEETTEEEEEEEEEEC-
T ss_pred CCCCCEEEEEEEEEEECCEEEEEEEEEEEEECCEEEEEEEEEEEE
T ss_conf 585999999999999878089999999999999999999999999