HHSEARCH alignment of GI: 254780770 and SCOP domain: d1sh8a_

Alignment
>d1sh8a_ d.38.1.5 (A:) Hypothetical protein PA5026 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=92.15  E-value=0.23  Score=25.75  Aligned_cols=126  Identities=15%  Similarity=0.111  Sum_probs=68.3

Q ss_pred             HHHHHHCCCCCCEEE--EEEEEEEECCCEEEEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC-CCCCCC
Q ss_conf             989984799975054--78999984697499999826888313134799950225669999863463454432-997763
Q gi|254780770|r   14 VELMRFLPHRYPFLL--VDKVVNIQRDESAIGIKNVTFNEPHFMGHFPGRPVMPGVLILEGMAQTAGAICAIH-NGFDQY   90 (161)
Q Consensus        14 ~eI~~~lPhr~Pfl~--ID~i~~~~~g~~~~g~k~v~~~e~ff~gHFp~~PvmPGvLliE~maQ~~~~l~~~~-~~~~~~   90 (161)
                      +-+.++.-++.||.-  ==++.++++| +++....++++.    .|+ | -+.=|++.  +++-++++++... .... .
T Consensus         7 e~~~~l~~~~~pf~~~~Gi~v~~~~~g-~~~l~~p~~~~~----N~~-G-~~hGG~~~--tl~D~a~~~a~~~~~~~~-~   76 (153)
T d1sh8a_           7 ELARHLTEEKIAFVQRSGLRAEVLEPG-YVRLRMPGAGNE----NHI-G-SMYAGALF--TLAELPGGALFLTSFDSA-R   76 (153)
T ss_dssp             HHHHHHHHHSSHHHHHHTCEEEEEETT-EEEEEECSTTCB----CTT-S-SBCHHHHH--HHHHTHHHHHHHHHSCTT-T
T ss_pred             HHHHHHHHCCCHHHHHCCCEEEEEECC-EEEEEEECCHHH----CCC-C-CCHHHHHH--HHHHHHHHHHHHHHCCCC-C
T ss_conf             999999873075999759699999699-999999855542----898-8-18999999--999999999999857866-5


Q ss_pred             EEEEEEECCCCEEEEEEEECCEEEEEEEE------------EEEECCEEEEEEEEEE-CCEEEEEEEEEEEEECC
Q ss_conf             02677523641360022128889999999------------9720777999999999-99999989999998445
Q gi|254780770|r   91 APPYLMSIDKARFRKPVFPGDRLEYHVNK------------VRNRVDLWKFQCCAKV-ENTVVAEAEICAMVMHE  152 (161)
Q Consensus        91 ~~~~l~~i~~~kF~~~V~PGd~L~i~~~i------------~~~~~~~~~~~~~~~v-~~~~va~a~l~~~i~~~  152 (161)
                      .. ....--+++|.+|+. |+ ++.++++            .+..+....++++++- +|++||++..++.+...
T Consensus        77 ~~-~~t~~~~i~f~~pa~-g~-~~~~~~~~~~~~~~~~~~~~~~gr~~~~~~v~i~d~~g~lvA~~~~~~~i~~~  148 (153)
T d1sh8a_          77 FY-PIVKEMTLRFRRPAK-GD-IRVEARLDAERIRQLETEAGERGKAEYSLELQLTDEQGEVVAESAALYQLRSH  148 (153)
T ss_dssp             EE-EEEEEEEEEECSCCC-SC-EEEEEECCHHHHHHHHHHHHHHSEEEEEEEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred             CE-EEEEEEEEEEECCCC-CC-EEEEEEECHHHHHHHHHHEEECCCEEEEEEEEEECCCCCEEEEEEEEEEECCC
T ss_conf             23-562000125521456-75-79999966898766542024457379999999994999999999999999789


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: PaaI/YdiI-like
domain: Hypothetical protein PA5026
species: Pseudomonas aeruginosa [TaxId: 287]