HHSEARCH alignment of GI: 254780770 and SCOP domain: d1vh9a_

Alignment
>d1vh9a_ d.38.1.5 (A:) Hypothetical protein YbdB {Escherichia coli [TaxId: 562]}
Probab=97.39  E-value=0.0041  Score=36.24  Aligned_cols=127  Identities=12%  Similarity=0.058  Sum_probs=76.7

Q ss_pred             HHHHHHHHHCCCCCCEE-EEE-EEEEEECCCEEEEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             41898998479997505-478-9999846974999998268883131347999502256699998634634544329977
Q gi|254780770|r   11 KDIVELMRFLPHRYPFL-LVD-KVVNIQRDESAIGIKNVTFNEPHFMGHFPGRPVMPGVLILEGMAQTAGAICAIHNGFD   88 (161)
Q Consensus        11 ~~~~eI~~~lPhr~Pfl-~ID-~i~~~~~g~~~~g~k~v~~~e~ff~gHFp~~PvmPGvLliE~maQ~~~~l~~~~~~~~   88 (161)
                      ++++++.+..+.  ||. +++ +++++++| +++....++.+  +..   | ..++=|=.+. +++-+++.++.......
T Consensus         8 ~tl~~l~~~~~~--~~~~~LGi~~~~~~~g-~~~~~~~v~~~--~~n---~-~g~~HGG~ia-tl~D~~~~~a~~~~~~~   77 (138)
T d1vh9a_           8 LTLDELNATSDN--TMVAHLGIVYTRLGDD-VLEAEMPVDTR--THQ---P-FGLLHGGASA-ALAETLGSMAGFMMTRD   77 (138)
T ss_dssp             CCHHHHHHTSTT--SHHHHTTCEEEEECSS-CEEEEEECSTT--TBC---T-TSSBCHHHHH-HHHHHHHHHHHHTTCCT
T ss_pred             CCHHHHHHHCCC--HHHHHCCCEEEEEECC-EEEEEEECCHH--HCC---C-CCCEECCHHH-HHHHHHHHHHHHHHCCC
T ss_conf             999999763723--3888569899999599-89999995999--929---9-9816140554-45778799999861345


Q ss_pred             CCEEEEEEECCCCEEEEEEEECCEEEEEEEEEEEECCEEEEEEEEEE-CCEEEEEEEEEEEEE
Q ss_conf             63026775236413600221288899999999720777999999999-999999899999984
Q gi|254780770|r   89 QYAPPYLMSIDKARFRKPVFPGDRLEYHVNKVRNRVDLWKFQCCAKV-ENTVVAEAEICAMVM  150 (161)
Q Consensus        89 ~~~~~~l~~i~~~kF~~~V~PGd~L~i~~~i~~~~~~~~~~~~~~~v-~~~~va~a~l~~~i~  150 (161)
                       +... ...--++.|.+|+.+| .++.++++.+..+.++.++++++- +|+++|.+..+++++
T Consensus        78 -~~~~-vT~~l~v~flrp~~~g-~l~a~a~v~~~Gr~~~~~e~~i~d~~g~lvA~a~~T~~il  137 (138)
T d1vh9a_          78 -GQCV-VGTELNATHHRPVSEG-KVRGVCQPLHLGRQNQSWEIVVFDEQGRRCCTCRLGTAVL  137 (138)
T ss_dssp             -TCCE-EEEEEEEEECSCCCSS-EEEEEEEEEEECSSEEEEEEEEECTTSCEEEEEEEEEEEC
T ss_pred             -CCCC-CCCCCCEEEEECCCCC-EEEEEEEEEECCCCEEEEEEEEECCCCCEEEEEEEEEEEE
T ss_conf             -6521-3012432697216897-6999999999278899999999928998999996999998


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: PaaI/YdiI-like
domain: Hypothetical protein YbdB
species: Escherichia coli [TaxId: 562]