Query         gi|254780770|ref|YP_003065183.1| (3R)-hydroxymyristoyl-ACP dehydratase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 161
No_of_seqs    121 out of 2072
Neff          6.9 
Searched_HMMs 13730
Date          Wed Jun  1 08:15:20 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780770.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1z6ba1 d.38.1.6 (A:84-229) (3 100.0 1.4E-45       0  292.0  18.2  142    9-150     2-146 (146)
  2 d1u1za_ d.38.1.6 (A:) (3R)-hyd 100.0 1.8E-44       0  284.5  17.3  138   11-148     2-142 (145)
  3 d1mkaa_ d.38.1.2 (A:) beta-Hyd 100.0 5.7E-36 4.2E-40  233.5  18.1  141   11-155     7-170 (171)
  4 d2f41a1 d.38.1.5 (A:73-183) Tr  99.3 6.4E-12 4.7E-16   89.1  10.3  108   28-148     2-111 (111)
  5 d1q6wa_ d.38.1.4 (A:) Monoamin  98.6 6.1E-07 4.5E-11   59.2  12.6   94   56-151    50-149 (151)
  6 d1ixla_ d.38.1.5 (A:) Hypothet  98.6 2.4E-06 1.8E-10   55.6  15.4  112   28-154    16-128 (130)
  7 d2cwza1 d.38.1.7 (A:1-138) Hyp  98.5   8E-07 5.8E-11   58.5  11.2  116   35-154     4-122 (138)
  8 d2f0xa1 d.38.1.5 (A:3-138) Hyp  98.2 4.4E-05 3.2E-09   48.1  14.7  127   12-149     5-136 (136)
  9 d2bi0a1 d.38.1.4 (A:8-185) Hyp  98.2 8.7E-06 6.3E-10   52.3  10.1   90   58-155    55-155 (178)
 10 d2b3na1 d.38.1.4 (A:6-159) Hyp  98.2 2.2E-05 1.6E-09   49.9  11.8  127    7-149     9-153 (154)
 11 d1iq6a_ d.38.1.4 (A:) (R)-spec  98.0 2.2E-05 1.6E-09   49.8   9.5  108   35-150     4-132 (132)
 12 d2q78a1 d.38.1.7 (A:1-130) Unc  98.0 0.00011 8.3E-09   45.6  12.0  114   37-155     8-124 (130)
 13 d2hboa1 d.38.1.5 (A:12-153) Hy  97.9 4.5E-05 3.3E-09   48.0   9.5   61   99-159    79-139 (142)
 14 d1zkia1 d.38.1.5 (A:4-129) Hyp  97.8 0.00099 7.2E-08   40.0  14.6  109   31-150    18-126 (126)
 15 d2c2ia1 d.38.1.4 (A:2-150) Hyp  97.8 2.7E-05   2E-09   49.3   6.4   87   57-147    53-146 (149)
 16 d2gvha1 d.38.1.1 (A:9-143) Pro  97.8 0.00019 1.4E-08   44.3  10.4  101   44-154    12-118 (135)
 17 d1s9ca1 d.38.1.4 (A:164-289) 2  97.8 3.3E-05 2.4E-09   48.9   6.5  111   19-143     3-120 (126)
 18 d2gvha2 d.38.1.1 (A:147-262) P  97.7 0.00027   2E-08   43.4  10.5   86   66-155    21-112 (116)
 19 d1vh5a_ d.38.1.5 (A:) Hypothet  97.7  0.0011 8.3E-08   39.6  13.7  129   10-151     7-138 (138)
 20 d1sc0a_ d.38.1.5 (A:) Hypothet  97.7  0.0013 9.4E-08   39.3  13.8  126   12-151     7-136 (137)
 21 d1wlua1 d.38.1.5 (A:2-117) Phe  97.7  0.0017 1.2E-07   38.5  15.7  105   31-149    11-115 (116)
 22 d1q4ua_ d.38.1.5 (A:) 4-hydrox  97.6  0.0024 1.7E-07   37.7  13.9  110   31-153    27-140 (140)
 23 d2hx5a1 d.38.1.1 (A:1-144) Hyp  97.5 0.00091 6.6E-08   40.2  11.2   67   92-158    64-130 (144)
 24 d1y7ua1 d.38.1.1 (A:8-171) Acy  97.5   0.001 7.5E-08   39.9  11.4   87   63-154    27-119 (164)
 25 d2fs2a1 d.38.1.5 (A:1-131) Phe  97.5   0.003 2.2E-07   37.0  14.2  105   31-148    25-130 (131)
 26 d1ylia1 d.38.1.1 (A:11-152) Pu  97.5  0.0017 1.3E-07   38.5  12.1   85   66-154    26-119 (142)
 27 d2bi0a2 d.38.1.4 (A:186-337) H  97.5 0.00069   5E-08   40.9  10.0   88   54-149    53-151 (152)
 28 d2oiwa1 d.38.1.1 (A:1-131) GK1  97.4  0.0011   8E-08   39.7  10.6   64   94-157    50-113 (131)
 29 d1vpma_ d.38.1.1 (A:) Acyl-CoA  97.4 0.00069   5E-08   40.9   9.6   86   63-153    28-119 (155)
 30 d2oafa1 d.38.1.1 (A:1-143) Hyp  97.4 0.00053 3.8E-08   41.6   8.6   66   92-157    61-126 (143)
 31 d1vh9a_ d.38.1.5 (A:) Hypothet  97.4  0.0041   3E-07   36.2  14.4  127   11-150     8-137 (138)
 32 d1s9ca2 d.38.1.4 (A:10-163) 2-  97.2 0.00071 5.2E-08   40.8   7.7   96   57-152    41-140 (154)
 33 d2cyea1 d.38.1.1 (A:1-132) Pro  97.2  0.0036 2.6E-07   36.6  11.1   55   99-153    58-112 (132)
 34 d1z54a1 d.38.1.1 (A:1-132) Pro  97.0  0.0027   2E-07   37.3   9.0   61   92-152    52-112 (132)
 35 d2fuja1 d.38.1.1 (A:5-122) Hyp  96.9  0.0054   4E-07   35.5  10.1   66   92-157    50-118 (118)
 36 d1s5ua_ d.38.1.1 (A:) Hypothet  96.8  0.0039 2.8E-07   36.4   8.3   66   92-157    52-118 (129)
 37 d1njka_ d.38.1.1 (A:) Hypothet  96.8  0.0085 6.2E-07   34.4  10.0   66   92-157    50-117 (133)
 38 d2gf6a1 d.38.1.1 (A:1-134) Hyp  96.8   0.017 1.2E-06   32.6  11.4   66   92-157    55-120 (134)
 39 d1pn2a2 d.38.1.4 (A:152-275) 2  96.6  0.0059 4.3E-07   35.3   8.0  107   20-145     5-119 (124)
 40 d2nuja1 d.38.1.1 (A:3-161) Hyp  96.6   0.022 1.6E-06   31.8  12.0   64   95-158    74-140 (159)
 41 d1c8ua1 d.38.1.3 (A:2-115) Thi  96.6   0.021 1.5E-06   32.1  10.6   82   65-152    31-112 (114)
 42 d2o5ua1 d.38.1.1 (A:5-143) Hyp  96.5   0.017 1.2E-06   32.6   9.8   67   91-157    56-124 (139)
 43 d2owna1 d.38.1.8 (A:3-149) Put  96.5   0.016 1.2E-06   32.7   9.7   65   92-156    58-123 (147)
 44 d2hlja1 d.38.1.1 (A:1-156) Hyp  96.5   0.026 1.9E-06   31.4  11.0   68   92-159    54-123 (156)
 45 d2alia1 d.38.1.1 (A:5-134) Hyp  96.3   0.026 1.9E-06   31.4   9.9   64   95-158    53-119 (130)
 46 d1tbua1 d.38.1.3 (A:13-116) Pe  96.3   0.027   2E-06   31.3   9.9   78   66-149    27-104 (104)
 47 d2essa1 d.38.1.8 (A:1-149) Acy  96.2   0.014   1E-06   33.0   8.1   65   92-156    57-122 (149)
 48 d1pn2a1 d.38.1.4 (A:4-151) 2-e  96.1   0.018 1.3E-06   32.4   8.4   58   94-151    68-132 (148)
 49 d1lo7a_ d.38.1.1 (A:) 4-hydrox  96.1   0.013 9.7E-07   33.2   7.5   54   99-152    63-121 (140)
 50 d2owna2 d.38.1.8 (A:150-258) P  96.1    0.02 1.4E-06   32.2   8.3   94   40-148    11-105 (109)
 51 d1t82a_ d.38.1.5 (A:) Putative  95.4   0.056 4.1E-06   29.4   8.5  126   14-150     6-142 (143)
 52 d2ov9a1 d.38.1.5 (A:7-209) Hyp  92.9    0.28   2E-05   25.3  14.9   52   96-147   149-201 (203)
 53 d2essa2 d.38.1.8 (A:150-247) A  92.2    0.15 1.1E-05   26.9   5.6   45  100-147    53-97  (98)
 54 d1sh8a_ d.38.1.5 (A:) Hypothet  92.1    0.23 1.7E-05   25.7   6.5  126   14-152     7-148 (153)
 55 d1yoca1 d.38.1.5 (A:1-145) Hyp  90.9    0.47 3.4E-05   23.9  12.1  119   16-150    20-143 (145)
 56 d1d2ea2 b.44.1.1 (A:349-451) E  71.1     2.9 0.00021   19.2   4.4   50  105-157    48-100 (103)
 57 d1c8ua2 d.38.1.3 (A:116-286) T  61.0     4.8 0.00035   17.8  10.8   57   93-149   109-167 (171)
 58 d2hj1a1 d.15.3.4 (A:11-87) Hyp  50.2     7.2 0.00053   16.8   3.4   50   65-116    24-73  (77)
 59 d1yt8a1 c.46.1.2 (A:107-242) T  37.4      11  0.0008   15.7   2.7   48   12-75     27-74  (136)
 60 d1yt8a2 c.46.1.2 (A:6-106) Thi  36.0     7.7 0.00056   16.6   1.7   45   13-73      6-50  (101)
 61 d2c78a2 b.44.1.1 (A:313-405) E  33.4      13 0.00097   15.2   4.7   41  105-148    48-91  (93)

No 1  
>d1z6ba1 d.38.1.6 (A:84-229) (3R)-hydroxymyristoyl ACP dehydrase FabZ {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=100.00  E-value=1.4e-45  Score=292.00  Aligned_cols=142  Identities=38%  Similarity=0.683  Sum_probs=131.7

Q ss_pred             CHHHHHHHHHHCCCCCCEEEEEEEEEEECCCEEEEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             86418989984799975054789999846974999998268883131347999502256699998634634544329977
Q gi|254780770|r    9 DAKDIVELMRFLPHRYPFLLVDKVVNIQRDESAIGIKNVTFNEPHFMGHFPGRPVMPGVLILEGMAQTAGAICAIHNGFD   88 (161)
Q Consensus         9 ~~~~~~eI~~~lPhr~Pfl~ID~i~~~~~g~~~~g~k~v~~~e~ff~gHFp~~PvmPGvLliE~maQ~~~~l~~~~~~~~   88 (161)
                      +.+|++||+++||||+||||||||++++||++++|+|+|+.|||||+||||++|+|||||++|+|||+++++.....+..
T Consensus         2 ~~~~~~~I~~llPhr~Pfl~vD~i~~~~~g~~~~~~k~v~~~e~~f~ghfp~~Pi~PgvlliEa~aQ~~~~l~~~~~~~~   81 (146)
T d1z6ba1           2 TSIDIEDIKKILPHRYPFLLVDKVIYMQPNKTIIGLKQVSTNEPFFNGHFPQKQIMPGVLQIEALAQLAGILCLKSDDSQ   81 (146)
T ss_dssp             CCBCHHHHHHHCCCCTTSCCCCEEEEEETTTEEEEEEECCTTSGGGGTSCTTSCCCCHHHHHHHHHHHHHHHHHHHC---
T ss_pred             CCCCHHHHHHHCCCCCCEEEEEEEEEEECCCEEEEEEECCCCCCEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             83499999976789888267899999957955999998377752511205885402017899999999889987354334


Q ss_pred             CCEEEEEEECCCCEEEEEEEECCEEEEEEEEEEEEC--CEEEEEEEEEECCEEEEEE-EEEEEEE
Q ss_conf             630267752364136002212888999999997207--7799999999999999989-9999984
Q gi|254780770|r   89 QYAPPYLMSIDKARFRKPVFPGDRLEYHVNKVRNRV--DLWKFQCCAKVENTVVAEA-EICAMVM  150 (161)
Q Consensus        89 ~~~~~~l~~i~~~kF~~~V~PGd~L~i~~~i~~~~~--~~~~~~~~~~v~~~~va~a-~l~~~i~  150 (161)
                      +++.++|++++++||+++|.|||+|++++++.+.++  ++++++|+++|||+++|++ ++++++.
T Consensus        82 ~~~~~~l~~i~~~kf~~~v~PGd~l~i~~~i~~~~~~~~i~~~~~~a~v~g~~v~~~~el~f~i~  146 (146)
T d1z6ba1          82 KNNLFLFAGVDGVRWKKPVLPGDTLTMQANLISFKSSLGIAKLSGVGYVNGKVVINISEMTFALS  146 (146)
T ss_dssp             -CCCEEEEEEEEEEECSCCCTTCEEEEEEEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEEEC
T ss_pred             CCEEEEEEEECCCEEECEEECCCEEEEEEEEEEEECCCCEEEEEEEEEECCEEEEEEEEEEEEEC
T ss_conf             68079999810048923275287999999999981676399999999999999999450599939


No 2  
>d1u1za_ d.38.1.6 (A:) (3R)-hydroxymyristoyl ACP dehydrase FabZ {Pseudomonas aeruginosa [TaxId: 287]}
Probab=100.00  E-value=1.8e-44  Score=284.50  Aligned_cols=138  Identities=46%  Similarity=0.804  Sum_probs=129.2

Q ss_pred             HHHHHHHHHCCCCCCEEEEEEEEEEE-CCCEEEEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC--CCC
Q ss_conf             41898998479997505478999984-697499999826888313134799950225669999863463454432--997
Q gi|254780770|r   11 KDIVELMRFLPHRYPFLLVDKVVNIQ-RDESAIGIKNVTFNEPHFMGHFPGRPVMPGVLILEGMAQTAGAICAIH--NGF   87 (161)
Q Consensus        11 ~~~~eI~~~lPhr~Pfl~ID~i~~~~-~g~~~~g~k~v~~~e~ff~gHFp~~PvmPGvLliE~maQ~~~~l~~~~--~~~   87 (161)
                      +|++||+++||||+||||||||++++ +|.+++|+|+|+.|||||+||||++|+|||||++|+|||+++++....  ...
T Consensus         2 ~~~~~I~~llPhR~PfllvD~i~~~~~~g~~~~~~k~v~~~e~~~~~hfp~~pv~Pgvl~iE~maQ~~~~l~~~~~~~~~   81 (145)
T d1u1za_           2 MDINEIREYLPHRYPFLLVDRVVELDIEGKRIRAYKNVSINEPFFNGHFPEHPIMPGVLIIEAMAQAAGILGFKMLDVKP   81 (145)
T ss_dssp             BCHHHHTTTCCCCTTSCCCCEEEEEETTTTEEEEEEECCTTSTTGGGSCTTSCCCCHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             CCHHHHHHHCCCCCCEEEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             89799998689989859999999993599789999982677430155556764256358999999999999876336778


Q ss_pred             CCCEEEEEEECCCCEEEEEEEECCEEEEEEEEEEEECCEEEEEEEEEECCEEEEEEEEEEE
Q ss_conf             7630267752364136002212888999999997207779999999999999998999999
Q gi|254780770|r   88 DQYAPPYLMSIDKARFRKPVFPGDRLEYHVNKVRNRVDLWKFQCCAKVENTVVAEAEICAM  148 (161)
Q Consensus        88 ~~~~~~~l~~i~~~kF~~~V~PGd~L~i~~~i~~~~~~~~~~~~~~~v~~~~va~a~l~~~  148 (161)
                      .++..++|.+++++||+++|.|||+|++++++.+.+++++.++|+++|||+++|+|+++++
T Consensus        82 ~~~~~~~l~~i~~~kf~~~v~PGd~L~i~v~~~~~~~~~~~~~~~~~v~~~~v~~a~l~~a  142 (145)
T d1u1za_          82 ADGTLYYFVGSDKLRFRQPVLPGDQLQLHAKFISVKRSIWKFDCHATVDDKPVCSAEIICA  142 (145)
T ss_dssp             ---CEEEEEEEEEEEECSCCCTTCEEEEEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEE
T ss_pred             CCCCEEEEEECEEEEECCCCCCCCEEEEEEEEEEEECCEEEEEEEEEECCEEEEEEEEEEE
T ss_conf             7885999970408999455579989999999999658999999999999999999999999


No 3  
>d1mkaa_ d.38.1.2 (A:) beta-Hydroxydecanol thiol ester dehydrase {Escherichia coli [TaxId: 562]}
Probab=100.00  E-value=5.7e-36  Score=233.52  Aligned_cols=141  Identities=21%  Similarity=0.301  Sum_probs=117.9

Q ss_pred             HHHHHHHHH------------CCCCCCEEEEEEEEEEECCC------EEEEEEEECCCCHHHCCCCCCCCCCCHHHHHHH
Q ss_conf             418989984------------79997505478999984697------499999826888313134799950225669999
Q gi|254780770|r   11 KDIVELMRF------------LPHRYPFLLVDKVVNIQRDE------SAIGIKNVTFNEPHFMGHFPGRPVMPGVLILEG   72 (161)
Q Consensus        11 ~~~~eI~~~------------lPhr~Pfl~ID~i~~~~~g~------~~~g~k~v~~~e~ff~gHFp~~PvmPGvLliE~   72 (161)
                      .+.+||.+.            |||+ ||||||||++++++.      +++|+|+|+.|||||+||||++|+|||||++||
T Consensus         7 ~~~~~ll~~a~g~~fg~~~~rlP~~-P~L~iDrV~~i~~~~g~~~~g~i~~~k~v~~~ewff~gHFp~~PvmPGvL~iEa   85 (171)
T d1mkaa_           7 YTKEDLLASGRGELFGAKGPQLPAP-NMLMMDRVVKMTETGGNFDKGYVEAELDINPDLWFFGCHFIGDPVMPGCLGLDA   85 (171)
T ss_dssp             BCHHHHHHHHTTCSSCSSSCCCCCT-TTCCCSEEEEEESSCTTTTSCEEEEEEECCTTSGGGGTTTTTSCCCCHHHHHHH
T ss_pred             CCHHHHHHHCCCCCCCCCCCCCCCC-CEEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCEECCCCCCCCCCCHHHHHHH
T ss_conf             9999999635897079998889999-878699999972898721542358897123556502455668673988999999


Q ss_pred             HHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEECCEE-EEEEEE---EEEECCEEEEEEEEEECCEEEEEEE-EEE
Q ss_conf             86346345443299776302677523641360022128889-999999---9720777999999999999999899-999
Q gi|254780770|r   73 MAQTAGAICAIHNGFDQYAPPYLMSIDKARFRKPVFPGDRL-EYHVNK---VRNRVDLWKFQCCAKVENTVVAEAE-ICA  147 (161)
Q Consensus        73 maQ~~~~l~~~~~~~~~~~~~~l~~i~~~kF~~~V~PGd~L-~i~~~i---~~~~~~~~~~~~~~~v~~~~va~a~-l~~  147 (161)
                      |+|++++++.+...  ++ ..++.++.++||+++|.|||++ ++++++   .+.++.++.++++++|||+++|+|+ +++
T Consensus        86 ~aQ~~~~l~~~~~~--~~-~~~~~~i~~~kfr~~V~Pgd~l~~~~i~~~~i~~~~~~~~~~~g~~~Vdgk~v~ea~~~~v  162 (171)
T d1mkaa_          86 MWQLVGFYLGWLGG--EG-KGRALGVGEVKFTGQVLPTAKKVTYRIHFKRIVNRRLIMGLADGEVLVDGRLIYTASDLKV  162 (171)
T ss_dssp             HHHHHHHHHHHTTC--CS-EEEEEEESCEEECSCCCTTCCEEEEEEEEEEEEESSSEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred             HHHHHHHHHEECCC--CC-CEEEEECCEEEEECCCCCCCEEEEEEEEEEEEEECCCEEEEEEEEEEECCEEEEEEECCEE
T ss_conf             99998686152277--98-3678615460684432279808999999999874374899999999989999999947799


Q ss_pred             EEECCCCC
Q ss_conf             98445200
Q gi|254780770|r  148 MVMHEKKE  155 (161)
Q Consensus       148 ~i~~~~~e  155 (161)
                      -+.++..+
T Consensus       163 glf~~~~~  170 (171)
T d1mkaa_         163 GLFQDTSA  170 (171)
T ss_dssp             EEESCCTT
T ss_pred             EEEECCCC
T ss_conf             98856777


No 4  
>d2f41a1 d.38.1.5 (A:73-183) Transcription factor FapR, C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=99.32  E-value=6.4e-12  Score=89.13  Aligned_cols=108  Identities=12%  Similarity=0.115  Sum_probs=84.7

Q ss_pred             EEEEEEEEECCCEEEEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEE
Q ss_conf             47899998469749999982688831313479995022566999986346345443299776302677523641360022
Q gi|254780770|r   28 LVDKVVNIQRDESAIGIKNVTFNEPHFMGHFPGRPVMPGVLILEGMAQTAGAICAIHNGFDQYAPPYLMSIDKARFRKPV  107 (161)
Q Consensus        28 ~ID~i~~~~~g~~~~g~k~v~~~e~ff~gHFp~~PvmPGvLliE~maQ~~~~l~~~~~~~~~~~~~~l~~i~~~kF~~~V  107 (161)
                      +||.+++++||+++++.+.++.+..++.++++.-+++++.+-..+++++.             ....+....+++|++|+
T Consensus         2 liGeii~~~~g~~a~~~~~v~~~~~~~~~g~~hGg~i~slad~~~~~~~~-------------~~~~vt~~~~i~f~~pv   68 (111)
T d2f41a1           2 VIGEIIDLELDDQAISILEIKQEHVFSRNQIARGHHLFAQANSLAVAVID-------------DELALTASADIRFTRQV   68 (111)
T ss_dssp             CSSEEEEEETTTEEEEEEECCGGGBCSTTCBBCHHHHHHHHHHHHHHTC----------------CCCEEEEEEEECSCC
T ss_pred             CCEEEEEEECCCEEEEEEECCHHHHCCCCCCCCCCCHHHHHHHHHHHHCC-------------CCCEEEEEEEEEEEECC
T ss_conf             64899998289559999986789902444886441519999999986428-------------87389999878998721


Q ss_pred             EECCEEEEEEEEEEEECC--EEEEEEEEEECCEEEEEEEEEEE
Q ss_conf             128889999999972077--79999999999999998999999
Q gi|254780770|r  108 FPGDRLEYHVNKVRNRVD--LWKFQCCAKVENTVVAEAEICAM  148 (161)
Q Consensus       108 ~PGd~L~i~~~i~~~~~~--~~~~~~~~~v~~~~va~a~l~~~  148 (161)
                      .|||+|+.++++.+..+.  .+.++++..++++++++|+++++
T Consensus        69 ~~Gd~l~a~a~v~~~~~~~~~~~v~v~~~~~~~~V~~G~f~~y  111 (111)
T d2f41a1          69 KQGERVVAKAKVTAVEKEKGRTVVEVNSYVGEEIVFSGRFDMY  111 (111)
T ss_dssp             BTTCEEEEEEEEEEECSSSSCEEEEEEEEETTEEEEEEEEEEC
T ss_pred             CCCCEEEEEEEEEEECCCEEEEEEEEEEEECCEEEEEEEEEEC
T ss_conf             5573499999999987837999999999989999999999979


No 5  
>d1q6wa_ d.38.1.4 (A:) Monoamine oxidase regulatory protein {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=98.61  E-value=6.1e-07  Score=59.22  Aligned_cols=94  Identities=20%  Similarity=0.325  Sum_probs=64.6

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEECCEEEEEEEEEEE---ECC--EEEEE
Q ss_conf             3479995022566999986346345443299776302677523641360022128889999999972---077--79999
Q gi|254780770|r   56 GHFPGRPVMPGVLILEGMAQTAGAICAIHNGFDQYAPPYLMSIDKARFRKPVFPGDRLEYHVNKVRN---RVD--LWKFQ  130 (161)
Q Consensus        56 gHFp~~PvmPGvLliE~maQ~~~~l~~~~~~~~~~~~~~l~~i~~~kF~~~V~PGd~L~i~~~i~~~---~~~--~~~~~  130 (161)
                      ..-.+.|+.||.+.+-.+.++..-.....  ........+.+..+++|++||+|||+|+++.++...   +.+  +..++
T Consensus        50 ~~g~~~~ia~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~f~~Pv~~GDtl~~~~~V~~~~~~~~~~~~v~~~  127 (151)
T d1q6wa_          50 KTIFGKPIAQGMLVLSIALGMVDQVILSN--YDVSSVIAFFGIKDVRFLRPVFIGDTIAASAEVVEKQDFDEKSGVVTYK  127 (151)
T ss_dssp             TSTTSSCBCCHHHHHHHHHHHHHHHHHTT--SBGGGEEEEEEEEEEEECSCCBTTCEEEEEEEEEEEEEEETTEEEEEEE
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHCC--CCCCCCEEEEEEEEEEECCCCCCCCEEEEEEEEEEEEEECCCCEEEEEE
T ss_conf             45778644316789999999988875113--4444513776655999914368979999999999989807997899999


Q ss_pred             EEEEE-CCEEEEEEEEEEEEEC
Q ss_conf             99999-9999998999999844
Q gi|254780770|r  131 CCAKV-ENTVVAEAEICAMVMH  151 (161)
Q Consensus       131 ~~~~v-~~~~va~a~l~~~i~~  151 (161)
                      .+++. +|++|++++.+.++..
T Consensus       128 ~~~~nq~g~~V~~~~~~~li~r  149 (151)
T d1q6wa_         128 LEVKNQRGELVLTALYSALIRK  149 (151)
T ss_dssp             EEEECTTSCEEEEEEEEEEEEC
T ss_pred             EEEEECCCCEEEEEEEEEEEEC
T ss_conf             9999799999999799999965


No 6  
>d1ixla_ d.38.1.5 (A:) Hypothetical protein PH1136 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=98.60  E-value=2.4e-06  Score=55.64  Aligned_cols=112  Identities=20%  Similarity=0.195  Sum_probs=76.1

Q ss_pred             EEEEEEEEECCCEEEEEEEECCCCHHHCCCCCCCCCC-CHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEE
Q ss_conf             4789999846974999998268883131347999502-256699998634634544329977630267752364136002
Q gi|254780770|r   28 LVDKVVNIQRDESAIGIKNVTFNEPHFMGHFPGRPVM-PGVLILEGMAQTAGAICAIHNGFDQYAPPYLMSIDKARFRKP  106 (161)
Q Consensus        28 ~ID~i~~~~~g~~~~g~k~v~~~e~ff~gHFp~~Pvm-PGvLliE~maQ~~~~l~~~~~~~~~~~~~~l~~i~~~kF~~~  106 (161)
                      ++=+++++++| ++.....++.+. .++.    .-++ -|++ . +++-.++..+..  .  ..   ....--+++|++|
T Consensus        16 l~~~~v~~~~g-~a~~~l~~~~~~-~~n~----~G~vHGG~l-~-~l~D~a~~~a~~--~--~~---~vT~~l~i~fl~p   80 (130)
T d1ixla_          16 LVGKPILIKEG-YAEVELETIDEM-KVDE----KGLVHGGFT-F-GLADYAAMLAVN--E--PT---VVLGKAEVRFTKP   80 (130)
T ss_dssp             TTCEEEEEETT-EEEEEEECCGGG-BSST----TCBBCHHHH-H-HHHHHHHHHHHC--C--TT---EEEEEEEEEECSC
T ss_pred             CCEEEEEEECC-EEEEEEEECHHH-CCCC----CCCCCCHHH-H-HHHHHHCCCCCC--C--CE---EEEEEEEEEEEEC
T ss_conf             53499999799-999999987899-2189----981823587-8-877632024234--5--50---8999988999303


Q ss_pred             EEECCEEEEEEEEEEEECCEEEEEEEEEECCEEEEEEEEEEEEECCCC
Q ss_conf             212888999999997207779999999999999998999999844520
Q gi|254780770|r  107 VFPGDRLEYHVNKVRNRVDLWKFQCCAKVENTVVAEAEICAMVMHEKK  154 (161)
Q Consensus       107 V~PGd~L~i~~~i~~~~~~~~~~~~~~~v~~~~va~a~l~~~i~~~~~  154 (161)
                      +.+||++++++++.+..+..+.++++++++++++|+|++++++.+++.
T Consensus        81 v~~G~~l~~~a~vi~~g~~~~~v~~~i~~~~~~Va~g~~~~~~~~k~~  128 (130)
T d1ixla_          81 VKVGDKLVAKAKIIEDLGKKKIVEVKVYREEEVVLEGKFYCYVLEKHV  128 (130)
T ss_dssp             CBTTCEEEEEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEEECSSCT
T ss_pred             CCCCCEEEEEEEEEEECCCEEEEEEEEEECCEEEEEEEEEEEEECHHH
T ss_conf             355727999999999489699999999999999999999999977300


No 7  
>d2cwza1 d.38.1.7 (A:1-138) Hypothetical protein TTHA0967 {Thermus thermophilus [TaxId: 274]}
Probab=98.52  E-value=8e-07  Score=58.53  Aligned_cols=116  Identities=16%  Similarity=0.067  Sum_probs=85.0

Q ss_pred             EECCCEEEEEEEECCCCHH-HCCCCCC-CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEECCE
Q ss_conf             8469749999982688831-3134799-9502256699998634634544329977630267752364136002212888
Q gi|254780770|r   35 IQRDESAIGIKNVTFNEPH-FMGHFPG-RPVMPGVLILEGMAQTAGAICAIHNGFDQYAPPYLMSIDKARFRKPVFPGDR  112 (161)
Q Consensus        35 ~~~g~~~~g~k~v~~~e~f-f~gHFp~-~PvmPGvLliE~maQ~~~~l~~~~~~~~~~~~~~l~~i~~~kF~~~V~PGd~  112 (161)
                      +..|.++.-.+.|+.++-+ |.| .-+ +|++--..++..|-+++...+.-..+.  +.. ..+.--+++|.+|+.+||+
T Consensus         4 i~vG~~~~~~~~Vt~~~~~~f~~-sgd~~pv~at~~~ia~~e~~a~~~v~~~l~~--G~~-tVg~~~~i~hl~Pv~iG~~   79 (138)
T d2cwza1           4 IPEGYEAVFETVVTPEMTVRFEE-LGPVHPVYATYWMVKHMELAGRKIILPFLEE--GEE-GIGSYVEARHLASALPGMR   79 (138)
T ss_dssp             CCTTCEEEEEEECCGGGEEEETT-TEEEEEEECHHHHHHHHHHHHHHHHTTTCCT--TEE-EEEEEEEEEECSCCCTTCE
T ss_pred             CCCCCEEEEEEEECHHHHHHHHH-CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC--CCC-EEEEEEEEEEECCCCCCCE
T ss_conf             88885799999969899478760-6876500066999999999999999731799--998-8999999998045678968


Q ss_pred             EEEEEEEEEEECCEEEEEEEEEEC-CEEEEEEEEEEEEECCCC
Q ss_conf             999999997207779999999999-999998999999844520
Q gi|254780770|r  113 LEYHVNKVRNRVDLWKFQCCAKVE-NTVVAEAEICAMVMHEKK  154 (161)
Q Consensus       113 L~i~~~i~~~~~~~~~~~~~~~v~-~~~va~a~l~~~i~~~~~  154 (161)
                      +++++++....++...++++++.+ |++|++|+.+.++++.++
T Consensus        80 V~~~a~v~~v~~~~~~~~v~~~d~~g~lV~~g~~~r~iv~~~~  122 (138)
T d2cwza1          80 VRVVARHEKTEGNRVYARVEAYNELGDLIGVGRTEQVILPKAK  122 (138)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEEETTCCEEEEEEEEEEEEEHHH
T ss_pred             EEEEEEEEEECCCEEEEEEEEEECCCCEEEEEEEEEEEECHHH
T ss_conf             9999999996797999999999879979999999999923999


No 8  
>d2f0xa1 d.38.1.5 (A:3-138) Hypothetical protein Them2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.25  E-value=4.4e-05  Score=48.11  Aligned_cols=127  Identities=9%  Similarity=0.087  Sum_probs=81.4

Q ss_pred             HHHHHHHHCCCCCCEE-EE-E-EEEEEECCCEEEEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             1898998479997505-47-8-9999846974999998268883131347999502256699998634634544329977
Q gi|254780770|r   12 DIVELMRFLPHRYPFL-LV-D-KVVNIQRDESAIGIKNVTFNEPHFMGHFPGRPVMPGVLILEGMAQTAGAICAIHNGFD   88 (161)
Q Consensus        12 ~~~eI~~~lPhr~Pfl-~I-D-~i~~~~~g~~~~g~k~v~~~e~ff~gHFp~~PvmPGvLliE~maQ~~~~l~~~~~~~~   88 (161)
                      +..|+.+.+.+.+||. .+ + ++++++|| +++....++++.  ..   |..-+-=|++.  +++-.++.++.......
T Consensus         5 ~~~e~~~~~~~~~~f~~~lg~i~~~~~~~g-~~~~~~~v~~~~--~n---~~G~lhGG~i~--~l~D~~~~~a~~~~~~~   76 (136)
T d2f0xa1           5 SLREVIKAMTKARNFERVLGKITLVSAAPG-KVICEMKVEEEH--TN---AIGTLHGGLTA--TLVDNISTMALLCTERG   76 (136)
T ss_dssp             HHHHHHHHHHHCSSGGGGGTTCEEEEEETT-EEEEEEECCGGG--BC---TTSBBCHHHHH--HHHHHHHHHHHHTSSSC
T ss_pred             HHHHHHHHHHCCCCHHHHHCCEEEEEECCC-EEEEEEECCHHH--CC---CCCCCCHHHHH--HHHHHHHHHHHHHHCCC
T ss_conf             999999976646887898598799998299-999999969999--69---88965514789--99999999999860789


Q ss_pred             CCEEEEEEECCCCEEEEEEEECCEEEEEEEEEEEECCEEEEEEEEEE--CCEEEEEEEEEEEE
Q ss_conf             63026775236413600221288899999999720777999999999--99999989999998
Q gi|254780770|r   89 QYAPPYLMSIDKARFRKPVFPGDRLEYHVNKVRNRVDLWKFQCCAKV--ENTVVAEAEICAMV  149 (161)
Q Consensus        89 ~~~~~~l~~i~~~kF~~~V~PGd~L~i~~~i~~~~~~~~~~~~~~~v--~~~~va~a~l~~~i  149 (161)
                        .. ....--++.|++|+.+|+.+++++++.+..+.+...+++++.  +++++|+|+-+.++
T Consensus        77 --~~-~vT~~l~i~fl~p~~~G~~v~~~a~v~~~gr~~~~~~~~i~~~~~~~liA~~~~T~~~  136 (136)
T d2f0xa1          77 --AP-GVSVDMNITYMSPAKLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHTKHL  136 (136)
T ss_dssp             --CC-CEEEEEEEEECSCCBTTCEEEEEEEEEEECSSEEEEEEEEEETTTCCEEEEEEEEEEC
T ss_pred             --CC-CEEEEEEEEEEECCCCCCEEEEEEEEEEECCCEEEEEEEEEECCCCEEEEEEEEEEEC
T ss_conf             --72-0334677899714799998999999999588799999999999999899999989839


No 9  
>d2bi0a1 d.38.1.4 (A:8-185) Hypothetical protein Rv0216/MT0226 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=98.19  E-value=8.7e-06  Score=52.31  Aligned_cols=90  Identities=18%  Similarity=0.049  Sum_probs=60.3

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEECCEEEEEEEEEEEEC----------CEE
Q ss_conf             7999502256699998634634544329977630267752364136002212888999999997207----------779
Q gi|254780770|r   58 FPGRPVMPGVLILEGMAQTAGAICAIHNGFDQYAPPYLMSIDKARFRKPVFPGDRLEYHVNKVRNRV----------DLW  127 (161)
Q Consensus        58 Fp~~PvmPGvLliE~maQ~~~~l~~~~~~~~~~~~~~l~~i~~~kF~~~V~PGd~L~i~~~i~~~~~----------~~~  127 (161)
                      +.+.++.+|.+.+ +++...  ..   ... .. .....+..++||++||+|||+|+.++++...+.          ++.
T Consensus        55 ~~~~~ia~g~~~~-~l~~~~--~~---~~~-~~-~~a~lg~~~~rf~~PV~~GDTl~~~~eV~~~r~~~srp~~~~~GiV  126 (178)
T d2bi0a1          55 GMPGPLAHPGLVC-DVAIGQ--ST---LAT-QR-VKANLFYRGLRFHRFPAVGDTLYTRTEVVGLRANSPKPGRAPTGLA  126 (178)
T ss_dssp             CCSSCBCCHHHHH-HHHHHH--HT---TTT-TT-CSEEEEEECEEBSSCCBTTCEEEEEEEEEEEEECCCCTTSCCEEEE
T ss_pred             CCCCCCCCCCEEE-EEECCE--EE---ECC-CC-CEEEEEEEEEEEEEECCCCCEEEEEEEEEEEEECCCCCCCCCCEEE
T ss_conf             7874212410023-320130--66---427-87-4689884100885001489997999999998725778888863599


Q ss_pred             EEEEEEEE-CCEEEEEEEEEEEEECCCCC
Q ss_conf             99999999-99999989999998445200
Q gi|254780770|r  128 KFQCCAKV-ENTVVAEAEICAMVMHEKKE  155 (161)
Q Consensus       128 ~~~~~~~v-~~~~va~a~l~~~i~~~~~e  155 (161)
                      .+..+++. +|++|++++-+.++......
T Consensus       127 ~~~~~~~NQ~ge~V~~~e~~~mi~~r~~~  155 (178)
T d2bi0a1         127 GLRMTTIDRTDRLVLDFYRCAMLPASPDW  155 (178)
T ss_dssp             EEEEEEECTTCCEEEEEEEEEEEECCTTC
T ss_pred             EEEEEEECCCCCEEEEEEEEEEEECCCCC
T ss_conf             99999995899999998998789769988


No 10 
>d2b3na1 d.38.1.4 (A:6-159) Hypothetical protein AF1124 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=98.17  E-value=2.2e-05  Score=49.91  Aligned_cols=127  Identities=15%  Similarity=0.050  Sum_probs=83.5

Q ss_pred             HCCHHHHHHHHHHCCCCCCEEEEEEEEEEECCCEEEEEEEECCCCHH-HCC--------C---------CCCCCCCCHHH
Q ss_conf             12864189899847999750547899998469749999982688831-313--------4---------79995022566
Q gi|254780770|r    7 CLDAKDIVELMRFLPHRYPFLLVDKVVNIQRDESAIGIKNVTFNEPH-FMG--------H---------FPGRPVMPGVL   68 (161)
Q Consensus         7 ~l~~~~~~eI~~~lPhr~Pfl~ID~i~~~~~g~~~~g~k~v~~~e~f-f~g--------H---------Fp~~PvmPGvL   68 (161)
                      .|+..-.++..+.-|.|..|   |   ++..|+...-.++++..+-. |.+        |         --+.++.||.+
T Consensus         9 ~~~~~~~~~~~~~~p~~~~~---~---el~iG~~~~~~rtiT~~di~~FA~~sgD~nPiH~D~e~Ak~~g~~~~IahG~l   82 (154)
T d2b3na1           9 EMKGIYSKKGGKVKPFEKFE---G---ELKEGYRFEYEKKLCEIDVAMFGLISGDLNPVHFDEDFASKTRFGGRVVHGML   82 (154)
T ss_dssp             HHHHHHHHTTCCCCCCCCCC---S---CCCTTCEEEEEEECCHHHHHHHHHHHCCCCHHHHCHHHHHHSTTSSCCCCHHH
T ss_pred             HHHCHHCCCCCCCCCCCCCC---C---CCCCCCEEEEEEEEEHHHHHHHHHHHCCCCCCEECHHHHHHCCCCCEEHHHHH
T ss_conf             86331102676557664351---2---06898899998888099999999825899877737878844676650316788


Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEECCEEEEEEEEEEEECCEEEEEEEEEECCEEEEEEEEEEE
Q ss_conf             99998634634544329977630267752364136002212888999999997207779999999999999998999999
Q gi|254780770|r   69 ILEGMAQTAGAICAIHNGFDQYAPPYLMSIDKARFRKPVFPGDRLEYHVNKVRNRVDLWKFQCCAKVENTVVAEAEICAM  148 (161)
Q Consensus        69 liE~maQ~~~~l~~~~~~~~~~~~~~l~~i~~~kF~~~V~PGd~L~i~~~i~~~~~~~~~~~~~~~v~~~~va~a~l~~~  148 (161)
                      ..=.+.   +++. ..  .  +... +. -.+++|.+||+|||+|++.+++...+.+...++.++.++++++++|+...+
T Consensus        83 ~~~~~~---~~~~-~~--~--g~~~-~~-~~~~rF~~PV~~GDtl~~~~~V~~~~~~~~~~~~~~~~~~~vv~~G~a~vl  152 (154)
T d2b3na1          83 TTSLVS---AAVA-RL--P--GTVV-LL-EQSFRYTSPVRIGDVVRVEGVVSGVEKNRYTIDVKCYTGDKVVAEGVVKVL  152 (154)
T ss_dssp             HHHHHH---HHHH-TS--S--SCEE-EE-EEEEEECSCCCTTCEEEEEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEE
T ss_pred             HHHHHH---HHHH-HC--C--CHHH-HH-HHHEEEECCCCCCCEEEEEEEEEEEECCEEEEEEEEEECCEEEEEEEEEEE
T ss_conf             999999---9988-64--2--0453-44-142077067489999999999999969989999999999999999899999


Q ss_pred             E
Q ss_conf             8
Q gi|254780770|r  149 V  149 (161)
Q Consensus       149 i  149 (161)
                      +
T Consensus       153 i  153 (154)
T d2b3na1         153 I  153 (154)
T ss_dssp             E
T ss_pred             E
T ss_conf             8


No 11 
>d1iq6a_ d.38.1.4 (A:) (R)-specific enoyl-CoA hydratase {Aeromonas caviae [TaxId: 648]}
Probab=98.03  E-value=2.2e-05  Score=49.83  Aligned_cols=108  Identities=15%  Similarity=0.137  Sum_probs=67.1

Q ss_pred             EECCCEEEEEEEECCCCHH-HC----CC-------------CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE
Q ss_conf             8469749999982688831-31----34-------------799950225669999863463454432997763026775
Q gi|254780770|r   35 IQRDESAIGIKNVTFNEPH-FM----GH-------------FPGRPVMPGVLILEGMAQTAGAICAIHNGFDQYAPPYLM   96 (161)
Q Consensus        35 ~~~g~~~~g~k~v~~~e~f-f~----gH-------------Fp~~PvmPGvLliE~maQ~~~~l~~~~~~~~~~~~~~l~   96 (161)
                      ++.|+.....+.++..+.. |.    .+             --+.++.||.+..-.+.++   +..... .  . ...++
T Consensus         4 l~vG~~~~~~~~it~~di~~fa~~sgD~nPiH~D~~~A~~~g~~~~ia~g~~~~~~~~~~---~~~~~~-~--~-~~~~~   76 (132)
T d1iq6a_           4 LEVGQKARLSKRFGAAEVAAFAALSEDFNPLHLDPAFAATTAFERPIVHGMLLASLFSGL---LGQQLP-G--K-GSIYL   76 (132)
T ss_dssp             CCTTCEEEEEEECCHHHHHHHHHHHTCCCHHHHCHHHHTTSTTCSCBCCHHHHHHHHHHH---HHHTSS-C--T-TCEEE
T ss_pred             CCCCCEEEEEEEECHHHHHHHHHHHCCCCCCEECHHHHHHCCCCCEEEEHHHHHHHHHHC---CHHHCC-C--C-CCEEE
T ss_conf             779999999788889999999998799997489577874457886264113445577532---152268-8--7-50202


Q ss_pred             ECCCCEEEEEEEECCEEEEEEEEEEE--ECCEEEEEEEEEE-CCEEEEEEEEEEEEE
Q ss_conf             23641360022128889999999972--0777999999999-999999899999984
Q gi|254780770|r   97 SIDKARFRKPVFPGDRLEYHVNKVRN--RVDLWKFQCCAKV-ENTVVAEAEICAMVM  150 (161)
Q Consensus        97 ~i~~~kF~~~V~PGd~L~i~~~i~~~--~~~~~~~~~~~~v-~~~~va~a~l~~~i~  150 (161)
                      + .+++|++||+|||+|+++.++...  ..+.+.+++++.. +|++|++|+...+++
T Consensus        77 ~-~~~rf~~Pv~~GDtl~~~~~v~~~~~~~~~v~~~~~~~nq~g~~V~~g~a~v~~P  132 (132)
T d1iq6a_          77 G-QSLSFKLPVFVGDEVTAEVEVTALREDKPIATLTTRIFTQGGALAVTGEAVVKLP  132 (132)
T ss_dssp             E-EEEEECSCCBTTCEEEEEEEEEEECSSSSEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred             H-HHCEECCCCCCCCEEEEEEEEEEEECCCCEEEEEEEEEECCCCEEEEEEEEEECC
T ss_conf             1-2114234279969999999999999589999999999989998999999999729


No 12 
>d2q78a1 d.38.1.7 (A:1-130) Uncharacterized protein TM0581 {Thermotoga maritima [TaxId: 2336]}
Probab=97.95  E-value=0.00011  Score=45.60  Aligned_cols=114  Identities=14%  Similarity=0.070  Sum_probs=84.6

Q ss_pred             CCCEEEEEEEECCCCHHH---CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEECCEE
Q ss_conf             697499999826888313---13479995022566999986346345443299776302677523641360022128889
Q gi|254780770|r   37 RDESAIGIKNVTFNEPHF---MGHFPGRPVMPGVLILEGMAQTAGAICAIHNGFDQYAPPYLMSIDKARFRKPVFPGDRL  113 (161)
Q Consensus        37 ~g~~~~g~k~v~~~e~ff---~gHFp~~PvmPGvLliE~maQ~~~~l~~~~~~~~~~~~~~l~~i~~~kF~~~V~PGd~L  113 (161)
                      .|.+.+  ..|+.|+.++   +.-+.+.|++--.-++.-|=++|.-++.-..+.  +... .+.--+++-.+++.+|+++
T Consensus         8 ~G~~~t--~ev~~~~~~~~~ed~~~~dl~VlaTp~lia~mE~a~~~~l~~~L~~--g~tt-VG~~v~I~Hla~t~vG~~V   82 (130)
T d2q78a1           8 EGKRLT--EDVALDETMVWNEDIEMLDLHLVATSALIGVVHRVSYELLSRYLPN--DYTA-VVVETLARHVKAVPTGTRV   82 (130)
T ss_dssp             TTCEEE--EEEEECGGGBCCSCGGGGGGCBBCHHHHHHHHHHHHHHHHHTTSCT--TEEE-EEEEEEEEECSCCBSSEEE
T ss_pred             CCCEEE--EEEECCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCC--CCEE-EEEEEEEEECCCCCCCCEE
T ss_conf             482789--9996184430567876434128846999999999999999954899--9658-9999999984776799999


Q ss_pred             EEEEEEEEEECCEEEEEEEEEECCEEEEEEEEEEEEECCCCC
Q ss_conf             999999972077799999999999999989999998445200
Q gi|254780770|r  114 EYHVNKVRNRVDLWKFQCCAKVENTVVAEAEICAMVMHEKKE  155 (161)
Q Consensus       114 ~i~~~i~~~~~~~~~~~~~~~v~~~~va~a~l~~~i~~~~~e  155 (161)
                      ++++++....++...|+++++-++..|++|+..-++++.++=
T Consensus        83 ~v~a~v~~vdgrrl~F~v~a~d~~~~Ia~G~h~R~iV~re~f  124 (130)
T d2q78a1          83 AVGVRVVGVVGNRVKFRGIVMSGDEKILEAEFVRAIVPREKL  124 (130)
T ss_dssp             EEEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEEEEEHHHH
T ss_pred             EEEEEEEEEECCEEEEEEEEEECCCEEEEEEEEEEEEEHHHH
T ss_conf             999999998689999999999899469999999999989998


No 13 
>d2hboa1 d.38.1.5 (A:12-153) Hypothetical protein CC3309 {Caulobacter crescentus [TaxId: 155892]}
Probab=97.92  E-value=4.5e-05  Score=48.00  Aligned_cols=61  Identities=10%  Similarity=0.009  Sum_probs=54.6

Q ss_pred             CCCEEEEEEEECCEEEEEEEEEEEECCEEEEEEEEEECCEEEEEEEEEEEEECCCCCCCCC
Q ss_conf             6413600221288899999999720777999999999999999899999984452002344
Q gi|254780770|r   99 DKARFRKPVFPGDRLEYHVNKVRNRVDLWKFQCCAKVENTVVAEAEICAMVMHEKKEKNES  159 (161)
Q Consensus        99 ~~~kF~~~V~PGd~L~i~~~i~~~~~~~~~~~~~~~v~~~~va~a~l~~~i~~~~~e~~~~  159 (161)
                      -++.|.+|+.+||.|+.++++.+..+.++..+|+++.+++++++|.-++.+...++++...
T Consensus        79 l~v~Fl~p~~~G~~l~~~a~v~~~g~~~~~~~~~i~~~~~~va~a~g~~~~~~~~~~~p~~  139 (142)
T d2hboa1          79 LMCDFLSGAKLGDWVEGEGELISEEDMLFTVRGRIWAGERTLITGTGVFKALSARKPRPGE  139 (142)
T ss_dssp             EEEEECSCCBTTCEEEEEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEEEEEECCCCTTS
T ss_pred             EEEEECCCCCCCCEEEEEEEEEEECCCEEEEEEEEEECCEEEEEEEEEEEECCCCCCCCCC
T ss_conf             9989996268999999999999958869999999999999999999999995899999763


No 14 
>d1zkia1 d.38.1.5 (A:4-129) Hypothetical protein PA5202 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=97.80  E-value=0.00099  Score=39.98  Aligned_cols=109  Identities=16%  Similarity=0.152  Sum_probs=67.5

Q ss_pred             EEEEEECCCEEEEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEEC
Q ss_conf             99998469749999982688831313479995022566999986346345443299776302677523641360022128
Q gi|254780770|r   31 KVVNIQRDESAIGIKNVTFNEPHFMGHFPGRPVMPGVLILEGMAQTAGAICAIHNGFDQYAPPYLMSIDKARFRKPVFPG  110 (161)
Q Consensus        31 ~i~~~~~g~~~~g~k~v~~~e~ff~gHFp~~PvmPGvLliE~maQ~~~~l~~~~~~~~~~~~~~l~~i~~~kF~~~V~PG  110 (161)
                      ++.++++| .++....++.  .+. .  |..-+--|++. =.+-.++++.+....+...  .. ...--++.|.+|+.+|
T Consensus        18 ~~~~~~~g-~~~~~~~~~~--~~~-n--~~G~vHGG~i~-~l~D~a~~~a~~~~~~~~~--~~-vt~~l~i~flr~~~~g   87 (126)
T d1zkia1          18 DPVSLGDG-VAEVRLPMAA--HLR-N--RGGVMHGGALF-SLMDVTMGLACSSSHGFDR--QS-VTLECKINYIRAVADG   87 (126)
T ss_dssp             EEEEECSS-EEEEEEECCG--GGB-C--TTSSBCHHHHH-HHHHHHHHHHHHHHHCTTS--CE-EEEEEEEEECSCCCSS
T ss_pred             EEEEEECC-EEEEEEECCH--HHC-C--CCCCEEEEEEE-EEECCCCCCCEEECCCCCC--CE-EEEEEEEEEECCCCCC
T ss_conf             99999599-9999999799--992-9--99979557558-7610044101000104676--31-7877889997379998


Q ss_pred             CEEEEEEEEEEEECCEEEEEEEEEECCEEEEEEEEEEEEE
Q ss_conf             8899999999720777999999999999999899999984
Q gi|254780770|r  111 DRLEYHVNKVRNRVDLWKFQCCAKVENTVVAEAEICAMVM  150 (161)
Q Consensus       111 d~L~i~~~i~~~~~~~~~~~~~~~v~~~~va~a~l~~~i~  150 (161)
                      + ++.++++.+..+.++..+++++.+++++|.+.-++++.
T Consensus        88 ~-l~a~a~v~~~gr~~~~~~~~i~~~~~lva~a~~tf~~l  126 (126)
T d1zkia1          88 E-VRCVARVLHAGRRSLVVEAEVRQGDKLVAKGQGTFAQL  126 (126)
T ss_dssp             E-EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred             E-EEEEEEEEEECCCEEEEEEEEEECCEEEEEEEEEEEEC
T ss_conf             8-99999999928989999999999999999999999979


No 15 
>d2c2ia1 d.38.1.4 (A:2-150) Hypothetical protein Rv0130 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.78  E-value=2.7e-05  Score=49.34  Aligned_cols=87  Identities=16%  Similarity=0.121  Sum_probs=51.7

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEECCEEEEEEEEEEEE---CC--EEEEEE
Q ss_conf             4799950225669999863463454432997763026775236413600221288899999999720---77--799999
Q gi|254780770|r   57 HFPGRPVMPGVLILEGMAQTAGAICAIHNGFDQYAPPYLMSIDKARFRKPVFPGDRLEYHVNKVRNR---VD--LWKFQC  131 (161)
Q Consensus        57 HFp~~PvmPGvLliE~maQ~~~~l~~~~~~~~~~~~~~l~~i~~~kF~~~V~PGd~L~i~~~i~~~~---~~--~~~~~~  131 (161)
                      ..-+.++.||.+..= +++  +.+... ............+..++||++||+|||+|++++++...+   ++  ....++
T Consensus        53 ~~~~~~i~~g~~~~~-l~~--~~~~~~-~~~~~~~~~~~~g~~~~rf~~PV~~GDti~~~~~V~~~~~~~~g~~~~~~~~  128 (149)
T d2c2ia1          53 GPFGTTIAHGFMTLA-LLP--RLQHQM-YTVKGVKLAINYGLNKVRFPAPVPVGSRVRATSSLVGVEDLGNGTVQATVST  128 (149)
T ss_dssp             STTSSCBCCHHHHHH-THH--HHHHTT-CEESSCSCEEEEEEEEEECCSCCBTTCEEEEEEEEEEEEEEETTEEEEEEEE
T ss_pred             CCCCCCEECCHHHHH-HHH--HHCCCC-CCCCCCCEEEEECEEEEEEECCEEECCEEEEEEEEEEEEECCCCCEEEEEEE
T ss_conf             576850101222343-454--311210-0113453367510038998566730766899999999999379928999999


Q ss_pred             EEEE--CCEEEEEEEEEE
Q ss_conf             9999--999999899999
Q gi|254780770|r  132 CAKV--ENTVVAEAEICA  147 (161)
Q Consensus       132 ~~~v--~~~~va~a~l~~  147 (161)
                      ++.+  +++.|+.|+...
T Consensus       129 ~ve~~~~~~~v~~~e~v~  146 (149)
T d2c2ia1         129 TVEVEGSAKPACVAESIV  146 (149)
T ss_dssp             EEEETTCSSCSEEEEEEE
T ss_pred             EEEEECCCCEEEEEEEEE
T ss_conf             999979986099999968


No 16 
>d2gvha1 d.38.1.1 (A:9-143) Probable acyl-CoA hydrolase AGR_L_2016 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=97.75  E-value=0.00019  Score=44.26  Aligned_cols=101  Identities=17%  Similarity=0.172  Sum_probs=66.4

Q ss_pred             EEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEECCEEEEEEEEEEEE
Q ss_conf             99826888313134799950225669999863463454432997763026775236413600221288899999999720
Q gi|254780770|r   44 IKNVTFNEPHFMGHFPGRPVMPGVLILEGMAQTAGAICAIHNGFDQYAPPYLMSIDKARFRKPVFPGDRLEYHVNKVRNR  123 (161)
Q Consensus        44 ~k~v~~~e~ff~gHFp~~PvmPGvLliE~maQ~~~~l~~~~~~~~~~~~~~l~~i~~~kF~~~V~PGd~L~i~~~i~~~~  123 (161)
                      ...|.+++.-..|.     +.=|.| ++-|-.+|++.+....    +.....++++++.|++|+.+||.|.+++++....
T Consensus        12 ~~~V~P~~~N~~G~-----l~GG~l-l~~~D~~a~~~a~~~~----~~~~vt~~vd~i~F~~Pv~~Gd~l~~~a~v~~~G   81 (135)
T d2gvha1          12 IDIVFPGDTNHHGT-----LFGGTG-LALMDRVAFIAATRFG----RTPFVTASCERIDFRQPARIGHIVEFTARPVKAG   81 (135)
T ss_dssp             EEEECTTCHHHHHH-----HTTHHH-HHHHHHHHHHHHHHHH----CSCEEEEEECCEECCCCCSSCEEEEEEEEEEEEC
T ss_pred             EEEECHHHCCCCCC-----CHHHHH-HHHHHHHHHHHHHHHH----CCCCEEEEEEEEEEEEECCCCCEEEEEEEEEECC
T ss_conf             99988356686881-----808999-9999998999875874----9972378875899973017996899999998736


Q ss_pred             CCEEEEEEEEEEC------CEEEEEEEEEEEEECCCC
Q ss_conf             7779999999999------999998999999844520
Q gi|254780770|r  124 VDLWKFQCCAKVE------NTVVAEAEICAMVMHEKK  154 (161)
Q Consensus       124 ~~~~~~~~~~~v~------~~~va~a~l~~~i~~~~~  154 (161)
                      +....+.++++..      .+.++++.++++-+++++
T Consensus        82 rsSm~V~v~v~~~~~~~~e~~~~~~~~ftfVavd~~~  118 (135)
T d2gvha1          82 RRSLTVEVEMVAETIIGRQQHTCTRGIFHMVAIPEGE  118 (135)
T ss_dssp             SSEEEEEEEEEEEETTTCCEEEEEEEEEEEEECCCST
T ss_pred             CEEEEEEEEEEEEECCCCEEEEEEEEEEEEEEEECCC
T ss_conf             5159999999998179993999999999999980899


No 17 
>d1s9ca1 d.38.1.4 (A:164-289) 2-enoyl-coa hydratase domain of multifunctional peroxisomal hydratase-dehydrogenase-epimerase {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.75  E-value=3.3e-05  Score=48.85  Aligned_cols=111  Identities=21%  Similarity=0.246  Sum_probs=63.1

Q ss_pred             HCCCCCCEEEEEEEEEEECCCEEEEEEEECCCC-------HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCE
Q ss_conf             479997505478999984697499999826888-------3131347999502256699998634634544329977630
Q gi|254780770|r   19 FLPHRYPFLLVDKVVNIQRDESAIGIKNVTFNE-------PHFMGHFPGRPVMPGVLILEGMAQTAGAICAIHNGFDQYA   91 (161)
Q Consensus        19 ~lPhr~Pfl~ID~i~~~~~g~~~~g~k~v~~~e-------~ff~gHFp~~PvmPGvLliE~maQ~~~~l~~~~~~~~~~~   91 (161)
                      .+|.|.|    |-+....-......+..+|.|.       .|-+..--+.|+.+|.|..=.+.+   ++.....+.. + 
T Consensus         3 ~~p~~~p----d~~~~~~~~~~~~~~~~lSGD~NPIH~D~~~Ak~~g~~~~IahG~l~~a~~~~---~~~~~~~~~~-~-   73 (126)
T d1s9ca1           3 AIPNRPP----DAVLTDTTSLNQAALYRLSGDWNPLHIDPNFASLAGFDKPILHGLCTFGFSAR---RVLQQFADND-V-   73 (126)
T ss_dssp             CCCSSCC----SEEEEEECCTTHHHHHGGGSCCCGGGTCHHHHHTTTCSSCCCCHHHHHHHHHH---HHHHHHSTTC-G-
T ss_pred             CCCCCCC----CEEEEEECCHHHHHHHHHHCCCCEEEECHHHHHHCCCCCCCCHHHHHHHHHHH---HHHHHHCCCC-C-
T ss_conf             7999999----95895432841999999879994268277897345888731017899999999---9998750268-1-


Q ss_pred             EEEEEECCCCEEEEEEEECCEEEEEEEEEEEECCEEEEEEEEEECCEEEEEE
Q ss_conf             2677523641360022128889999999972077799999999999999989
Q gi|254780770|r   92 PPYLMSIDKARFRKPVFPGDRLEYHVNKVRNRVDLWKFQCCAKVENTVVAEA  143 (161)
Q Consensus        92 ~~~l~~i~~~kF~~~V~PGd~L~i~~~i~~~~~~~~~~~~~~~v~~~~va~a  143 (161)
                       ..+.+ .+++|.+||+|||+|+++.+.   .++...+++.+..+|+++.++
T Consensus        74 -~~~~~-~~~rF~~Pv~~gdtl~v~~~~---~~~~v~~~~~~~~~g~~Vl~g  120 (126)
T d1s9ca1          74 -SRFKA-VKARFAKPVYPGQTLQTEMWK---EGNRIHFQTKVQETGDIVISN  120 (126)
T ss_dssp             -GGEEE-EEEEECSCCCTTCEEEEEEEE---ETTEEEEEEEETTTTEEEEEE
T ss_pred             -EEEEE-EEEEECCCCCCCCEEEEEEEE---CCCEEEEEEEEECCCEEEEEC
T ss_conf             -14999-995887899899999999997---299899999996299699948


No 18 
>d2gvha2 d.38.1.1 (A:147-262) Probable acyl-CoA hydrolase AGR_L_2016 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=97.70  E-value=0.00027  Score=43.37  Aligned_cols=86  Identities=14%  Similarity=0.074  Sum_probs=63.9

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEECCEEEEEEEEEEEECCEEEEEEEEEEC------CEE
Q ss_conf             56699998634634544329977630267752364136002212888999999997207779999999999------999
Q gi|254780770|r   66 GVLILEGMAQTAGAICAIHNGFDQYAPPYLMSIDKARFRKPVFPGDRLEYHVNKVRNRVDLWKFQCCAKVE------NTV  139 (161)
Q Consensus        66 GvLliE~maQ~~~~l~~~~~~~~~~~~~~l~~i~~~kF~~~V~PGd~L~i~~~i~~~~~~~~~~~~~~~v~------~~~  139 (161)
                      |=.+++-|-++|++.+....    +.....++++++.|++|+.+||.|.+++++....+.......+++..      .++
T Consensus        21 GG~l~~~~D~~a~~~a~~~~----~~~~vt~~id~i~F~~Pv~~Gd~l~~~a~V~~~G~sS~~V~v~v~~~~~~~~~~~~   96 (116)
T d2gvha2          21 GGEAIAYMTKAAFVAASRYC----GKLVVLASSERIDFARAIEIGEIVEAQAHVERVGRSSMSIQTKLWSENLLTGERHI   96 (116)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH----SSEEEEEEECCEEBSSCCBTTEEEEEEEEEEEECSSEEEEEEEEEEEETTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHC----CCCCEEEEEEEEEEEEEECCCCEEEEEEEEEECCCEEEEEEEEEEEEECCCCCEEE
T ss_conf             89999999999999999974----99961899937999830068978999999998156029999999998147995899


Q ss_pred             EEEEEEEEEEECCCCC
Q ss_conf             9989999998445200
Q gi|254780770|r  140 VAEAEICAMVMHEKKE  155 (161)
Q Consensus       140 va~a~l~~~i~~~~~e  155 (161)
                      ++++.++++-++++.+
T Consensus        97 ~~~~~ftfVavd~~gk  112 (116)
T d2gvha2          97 TATGHFTMVAVDKDHR  112 (116)
T ss_dssp             EEEEEEEEEEEC---C
T ss_pred             EEEEEEEEEEECCCCC
T ss_conf             9999999999999988


No 19 
>d1vh5a_ d.38.1.5 (A:) Hypothetical protein YdiI {Escherichia coli [TaxId: 562]}
Probab=97.70  E-value=0.0011  Score=39.59  Aligned_cols=129  Identities=9%  Similarity=-0.021  Sum_probs=78.5

Q ss_pred             HHHHHHHHHHCCCCCCEE--EEEEEEEEECCCEEEEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             641898998479997505--478999984697499999826888313134799950225669999863463454432997
Q gi|254780770|r   10 AKDIVELMRFLPHRYPFL--LVDKVVNIQRDESAIGIKNVTFNEPHFMGHFPGRPVMPGVLILEGMAQTAGAICAIHNGF   87 (161)
Q Consensus        10 ~~~~~eI~~~lPhr~Pfl--~ID~i~~~~~g~~~~g~k~v~~~e~ff~gHFp~~PvmPGvLliE~maQ~~~~l~~~~~~~   87 (161)
                      .+++++|.+...+  ||.  +==+++++++| ++.....++.+  +.. +   ..++=|-.+. +++-.++.++......
T Consensus         7 ~~~~e~ln~~~~~--~~~~~Lg~~~~~~~~g-~~~~~~~~~~~--~~n-~---~g~~HGG~ia-tl~D~a~~~a~~~~~~   76 (138)
T d1vh5a_           7 KITLEALNAMGEG--NMVGFLDIRFEHIGDD-TLEATMPVDSR--TKQ-P---FGLLHGGASV-VLAESIGSVAGYLCTE   76 (138)
T ss_dssp             CCCHHHHHHTTTT--SHHHHTTCEEEEECSS-CEEEEEECSTT--TBC-T---TSSBCHHHHH-HHHHHHHHHHHHHTSC
T ss_pred             CCCHHHHHHHCCC--CHHHHHCCEEEEEECC-EEEEEEECCHH--HCC-C---CCCCCCEEEE-EEHHHHHHHHHHHHCC
T ss_conf             7899999754615--3678729899999599-89999998999--939-9---9917120256-6313334443333023


Q ss_pred             CCCEEEEEEECCCCEEEEEEEECCEEEEEEEEEEEECCEEEEEEEEEE-CCEEEEEEEEEEEEEC
Q ss_conf             763026775236413600221288899999999720777999999999-9999998999999844
Q gi|254780770|r   88 DQYAPPYLMSIDKARFRKPVFPGDRLEYHVNKVRNRVDLWKFQCCAKV-ENTVVAEAEICAMVMH  151 (161)
Q Consensus        88 ~~~~~~~l~~i~~~kF~~~V~PGd~L~i~~~i~~~~~~~~~~~~~~~v-~~~~va~a~l~~~i~~  151 (161)
                      . +.. ....--++.|.+|+.+|+ +..++++.+..++++.++++++. +|+++|.+..++++++
T Consensus        77 ~-~~~-~~t~~~~i~flr~~~~g~-l~a~a~vi~~Gr~~~~~~~~i~~~~g~lvA~a~~T~~vv~  138 (138)
T d1vh5a_          77 G-EQK-VVGLEINANHVRSAREGR-VRGVCKPLHLGSRHQVWQIEIFDEKGRLCCSSRLTTAILE  138 (138)
T ss_dssp             T-TCE-EEEEEEEEEECSCCCSSE-EEEEEEEEEECSSEEEEEEEEECTTSCEEEEEEEEEEEEC
T ss_pred             C-CCC-CCCCEEEEEEEECCCCCC-EEEEEEEEEECCCEEEEEEEEECCCCCEEEEEEEEEEEEC
T ss_conf             2-001-225406789983268985-8999999991896999999999499989999989999979


No 20 
>d1sc0a_ d.38.1.5 (A:) Hypothetical protein HI1161 {Haemophilus influenzae [TaxId: 727]}
Probab=97.69  E-value=0.0013  Score=39.28  Aligned_cols=126  Identities=13%  Similarity=0.089  Sum_probs=77.1

Q ss_pred             HHHHHHHHCCCCCCEEEEEEEEEEECCCEEEEEEEECCCCHHHCCCCCCCCCCC-HHH--HHHHHHHHHHHHHHHCCCCC
Q ss_conf             189899847999750547899998469749999982688831313479995022-566--99998634634544329977
Q gi|254780770|r   12 DIVELMRFLPHRYPFLLVDKVVNIQRDESAIGIKNVTFNEPHFMGHFPGRPVMP-GVL--ILEGMAQTAGAICAIHNGFD   88 (161)
Q Consensus        12 ~~~eI~~~lPhr~Pfl~ID~i~~~~~g~~~~g~k~v~~~e~ff~gHFp~~PvmP-GvL--liE~maQ~~~~l~~~~~~~~   88 (161)
                      +++++.+...+-..=++==+++++++| +++....+..+  ++.   |. .++= |++  +++..+   ++......+. 
T Consensus         7 ~l~~l~~~~~~~~~~~lG~~~~~~~~g-~~~~~~~v~~~--~~n---~~-g~vHGG~l~al~D~~~---~~a~~~~~~~-   75 (137)
T d1sc0a_           7 TLENLNQLCSNSAVSHLGIEISAFGED-WIEATMPVDHR--TMQ---PF-GVLHGGVSVALAETIG---SLAGSLCLEE-   75 (137)
T ss_dssp             CHHHHHHHTCSSHHHHTTCEEEEECSS-CEEEEEECSTT--TBC---TT-SSBCHHHHHHHHHHHH---HHHHHHTSCT-
T ss_pred             CHHHHHHHCCCCHHHHCCCEEEEEECC-EEEEEEECCHH--HCC---CC-CEEECCCEEEEHHHHH---HHHHHHHHCC-
T ss_conf             899997545252888559899999799-99999990899--939---99-8362331112157769---9999975211-


Q ss_pred             CCEEEEEEECCCCEEEEEEEECCEEEEEEEEEEEECCEEEEEEEEEE-CCEEEEEEEEEEEEEC
Q ss_conf             63026775236413600221288899999999720777999999999-9999998999999844
Q gi|254780770|r   89 QYAPPYLMSIDKARFRKPVFPGDRLEYHVNKVRNRVDLWKFQCCAKV-ENTVVAEAEICAMVMH  151 (161)
Q Consensus        89 ~~~~~~l~~i~~~kF~~~V~PGd~L~i~~~i~~~~~~~~~~~~~~~v-~~~~va~a~l~~~i~~  151 (161)
                       + ......--++.|.+|+.+| .+++++++.+..+.++.++++++. +|+++|.+.-++++++
T Consensus        76 -~-~~~~T~~l~v~flrp~~~g-~l~a~a~v~~~Gr~~~~~e~~i~~~~g~lvA~a~~T~~i~~  136 (137)
T d1sc0a_          76 -G-KTVVGLDINANHLRPVRSG-KVTARATPINLGRNIQVWQIDIRTEENKLCCVSRLTLSVIN  136 (137)
T ss_dssp             -T-CEEEEEEEEEEECSCCCSS-EEEEEEEEEEECSSEEEEEEEEECTTSCEEEEEEEEEEEEC
T ss_pred             -C-CEEEEEEEEEEEEEECCCC-EEEEEEEEEECCCCEEEEEEEEEECCCCEEEEEEEEEEEEC
T ss_conf             -3-1257414799999615898-19999999972861999999999189999999999999970


No 21 
>d1wlua1 d.38.1.5 (A:2-117) Phenylacetic acid degradation protein PaaI {Thermus thermophilus [TaxId: 274]}
Probab=97.67  E-value=0.0017  Score=38.53  Aligned_cols=105  Identities=19%  Similarity=0.188  Sum_probs=67.5

Q ss_pred             EEEEEECCCEEEEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEEC
Q ss_conf             99998469749999982688831313479995022566999986346345443299776302677523641360022128
Q gi|254780770|r   31 KVVNIQRDESAIGIKNVTFNEPHFMGHFPGRPVMPGVLILEGMAQTAGAICAIHNGFDQYAPPYLMSIDKARFRKPVFPG  110 (161)
Q Consensus        31 ~i~~~~~g~~~~g~k~v~~~e~ff~gHFp~~PvmPGvLliE~maQ~~~~l~~~~~~~~~~~~~~l~~i~~~kF~~~V~PG  110 (161)
                      ++.++++|. ++....++  +++..   |..-+--|++ . +++-+++..+.....    . . ...--+++|.+|+.+|
T Consensus        11 ~~~~~~~g~-~~~~~~~~--~~~~n---~~G~~hGG~i-~-tl~D~~~~~a~~~~~----~-~-vT~~l~i~fl~p~~~g   76 (116)
T d1wlua1          11 KVLHLAPGE-AVVAGEVR--ADHLN---LHGTAHGGFL-Y-ALADSAFALASNTRG----P-A-VALSCRMDYFRPLGAG   76 (116)
T ss_dssp             EEEEEETTE-EEEEEECC--GGGBC---TTSSBCHHHH-H-HHHHHHHHHHHHTTS----C-E-EEEEEEEEECSCCCTT
T ss_pred             EEEEEECCE-EEEEEEEC--HHHCC---CCCCCCCEEE-E-EEEHHHHHHHHHCCC----C-E-EEEEEEEEECCCCCCC
T ss_conf             999996999-99999909--99969---9997927658-8-896111112553167----2-6-9999999872467999


Q ss_pred             CEEEEEEEEEEEECCEEEEEEEEEECCEEEEEEEEEEEE
Q ss_conf             889999999972077799999999999999989999998
Q gi|254780770|r  111 DRLEYHVNKVRNRVDLWKFQCCAKVENTVVAEAEICAMV  149 (161)
Q Consensus       111 d~L~i~~~i~~~~~~~~~~~~~~~v~~~~va~a~l~~~i  149 (161)
                      +.+++++++.+..+....++++++.+|+++|++.-+++-
T Consensus        77 ~~l~~~a~v~~~g~~~~~~~~~i~~~~~lvA~a~~t~~r  115 (116)
T d1wlua1          77 ARVEARAVEVNLSRRTATYRVEVVSEGKLVALFTGTVFR  115 (116)
T ss_dssp             CEEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred             CEEEEEEEEEEECCCEEEEEEEEEECCEEEEEEEEEEEE
T ss_conf             899999999995886999999999999999999999997


No 22 
>d1q4ua_ d.38.1.5 (A:) 4-hydroxybenzoyl CoA thioesterase {Arthrobacter sp., strain su [TaxId: 1667]}
Probab=97.58  E-value=0.0024  Score=37.71  Aligned_cols=110  Identities=12%  Similarity=0.102  Sum_probs=69.2

Q ss_pred             EEEEEECCCEEEEEEEECCCCHHHCCCCCCCCCCC-HHH--HHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEE
Q ss_conf             99998469749999982688831313479995022-566--999986346345443299776302677523641360022
Q gi|254780770|r   31 KVVNIQRDESAIGIKNVTFNEPHFMGHFPGRPVMP-GVL--ILEGMAQTAGAICAIHNGFDQYAPPYLMSIDKARFRKPV  107 (161)
Q Consensus        31 ~i~~~~~g~~~~g~k~v~~~e~ff~gHFp~~PvmP-GvL--liE~maQ~~~~l~~~~~~~~~~~~~~l~~i~~~kF~~~V  107 (161)
                      ++++++|| +++....++.  .+...    .-++= |++  ++|..   +++........ .. ......--+..|.+++
T Consensus        27 ~i~~~~~g-~~~~~l~v~~--~~~n~----~G~vHGG~~~tl~D~a---~~~a~~~~~~~-~~-~~~~t~~~~~~~~~~~   94 (140)
T d1q4ua_          27 VIDEMTPE-RATASVEVTD--TLRQR----WGLVHGGAYCALAEML---ATEATVAVVHE-KG-MMAVGQSNHTSFFRPV   94 (140)
T ss_dssp             EEEEEETT-EEEEEEECCG--GGBCT----TSSBCHHHHHHHHHHH---HHHHHHHHHGG-GT-EEEEEEEEEEEECSCC
T ss_pred             EEEEEECC-EEEEEEECCH--HHCCC----CCEEEEEEEEEEECCC---CCHHHHHHCCC-CE-EEEECHHHHHHCCCCC
T ss_conf             99999399-9999999899--99198----9768766899873123---42000000243-20-3420311222012545


Q ss_pred             EECCEEEEEEEEEEEECCEEEEEEEEEE-CCEEEEEEEEEEEEECCC
Q ss_conf             1288899999999720777999999999-999999899999984452
Q gi|254780770|r  108 FPGDRLEYHVNKVRNRVDLWKFQCCAKV-ENTVVAEAEICAMVMHEK  153 (161)
Q Consensus       108 ~PGd~L~i~~~i~~~~~~~~~~~~~~~v-~~~~va~a~l~~~i~~~~  153 (161)
                      ..| .++.++++.+..+.++.++++++- +|+++|.+..++++..++
T Consensus        95 ~~g-~l~a~a~v~~~Gr~~~~~~~~i~d~~g~lvA~at~T~~i~pkk  140 (140)
T d1q4ua_          95 KEG-HVRAEAVRIHAGSTTWFWDVSLRDDAGRLCAVSSMSIAVRPRR  140 (140)
T ss_dssp             CSS-EEEEEEEEEEECSSEEEEEEEEECTTCCEEEEEEEEEEEEECC
T ss_pred             CCC-EEEEEEEEEEECCEEEEEEEEEECCCCCEEEEEEEEEEEECCC
T ss_conf             576-4899999827823089999999989998999997999971799


No 23 
>d2hx5a1 d.38.1.1 (A:1-144) Hypothetical protein PMT2055 {Prochlorococcus marinus [TaxId: 1219]}
Probab=97.53  E-value=0.00091  Score=40.19  Aligned_cols=67  Identities=18%  Similarity=0.278  Sum_probs=56.7

Q ss_pred             EEEEEECCCCEEEEEEEECCEEEEEEEEEEEECCEEEEEEEEEECCEEEEEEEEEEEEECCCCCCCC
Q ss_conf             2677523641360022128889999999972077799999999999999989999998445200234
Q gi|254780770|r   92 PPYLMSIDKARFRKPVFPGDRLEYHVNKVRNRVDLWKFQCCAKVENTVVAEAEICAMVMHEKKEKNE  158 (161)
Q Consensus        92 ~~~l~~i~~~kF~~~V~PGd~L~i~~~i~~~~~~~~~~~~~~~v~~~~va~a~l~~~i~~~~~e~~~  158 (161)
                      ......--+++|++++.+||++++++.+.+.++....+..++..+|+++|++....+.++.+..+.-
T Consensus        64 ~~~~v~~~~~~y~~~~~~~d~i~v~~~v~~~~~~s~~~~~~i~~~~~~~a~~~~~~v~~d~~t~k~~  130 (144)
T d2hx5a1          64 VALPIIHCQADFRRPIHTGDALAMELRPERLNPNSFQVHFEFRCEEQIAAHALIRHLAINAQTRHRC  130 (144)
T ss_dssp             EECCEEEEEEEECSCCCTTCEEEEEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEECEETTTCCBC
T ss_pred             EEEEEEEEEEEEECCCCCCCCEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEEEEEEECCCCCCC
T ss_conf             5899999999995466477504689998327974999999999899989999999999989999365


No 24 
>d1y7ua1 d.38.1.1 (A:8-171) Acyl-coa hydrolase BC2038 {Bacillus cereus [TaxId: 1396]}
Probab=97.52  E-value=0.001  Score=39.86  Aligned_cols=87  Identities=16%  Similarity=0.168  Sum_probs=64.3

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEECCEEEEEEEEEEEECCEEEEEEEEEEC----C-
Q ss_conf             02256699998634634544329977630267752364136002212888999999997207779999999999----9-
Q gi|254780770|r   63 VMPGVLILEGMAQTAGAICAIHNGFDQYAPPYLMSIDKARFRKPVFPGDRLEYHVNKVRNRVDLWKFQCCAKVE----N-  137 (161)
Q Consensus        63 vmPGvLliE~maQ~~~~l~~~~~~~~~~~~~~l~~i~~~kF~~~V~PGd~L~i~~~i~~~~~~~~~~~~~~~v~----~-  137 (161)
                      +.=|.| ++-|-.+|++.+....    +.....++++++.|++|+..||.|.+++++....+....+.++++..    + 
T Consensus        27 l~GG~l-l~~~D~~a~~~a~~~~----~~~~vtasvd~i~F~~Pv~~Gd~l~~~a~V~~~G~tS~~V~v~v~~~~~~~~~  101 (164)
T d1y7ua1          27 LFGGKI-LSEMDMVASISASRHS----RKECVTASMDWVDFLHPVRSSDCVSYESFVIWTGRTSMEVFVKVVSEYLISGE  101 (164)
T ss_dssp             BCHHHH-HHHHHHHHHHHHHHHH----CSEEEEEEECCCCCCSCCCTTCEEEEEEEEEEECSSEEEEEEEEEEECTTTCC
T ss_pred             EEHHHH-HHHHHHHHHHHHHHHC----CCCCCEEEEEEEEEEECCCCCCEEEEEEEEEECCCCEEEEEEEEEEEECCCCC
T ss_conf             428999-9999999999999970----99984699701888502278956999999702477149999999997077990


Q ss_pred             -EEEEEEEEEEEEECCCC
Q ss_conf             -99998999999844520
Q gi|254780770|r  138 -TVVAEAEICAMVMHEKK  154 (161)
Q Consensus       138 -~~va~a~l~~~i~~~~~  154 (161)
                       ++++++-|+++-++++.
T Consensus       102 ~~~~~~a~ftfVavd~~g  119 (164)
T d1y7ua1         102 KRIAATSFVTFVALSKEN  119 (164)
T ss_dssp             EEEEEEEEEEEEEECTTS
T ss_pred             EEEEEEEEEEEEEECCCC
T ss_conf             899877899999987999


No 25 
>d2fs2a1 d.38.1.5 (A:1-131) Phenylacetic acid degradation protein PaaI {Escherichia coli [TaxId: 562]}
Probab=97.49  E-value=0.003  Score=37.04  Aligned_cols=105  Identities=18%  Similarity=0.116  Sum_probs=67.6

Q ss_pred             EEEEEECCCEEEEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEEC
Q ss_conf             99998469749999982688831313479995022566999986346345443299776302677523641360022128
Q gi|254780770|r   31 KVVNIQRDESAIGIKNVTFNEPHFMGHFPGRPVMPGVLILEGMAQTAGAICAIHNGFDQYAPPYLMSIDKARFRKPVFPG  110 (161)
Q Consensus        31 ~i~~~~~g~~~~g~k~v~~~e~ff~gHFp~~PvmPGvLliE~maQ~~~~l~~~~~~~~~~~~~~l~~i~~~kF~~~V~PG  110 (161)
                      +++++++| +++....++++  ...   |..-+-=|++  =+++-.++..+.....    ...+ ..--+.+|.+|+.+|
T Consensus        25 ~i~~~~~g-~~~~~~~v~~~--~~n---~~G~vhGG~l--~al~D~a~~~a~~~~~----~~~~-t~~~~i~fl~p~~~G   91 (131)
T d2fs2a1          25 DIISMDEG-FAVVTMTVTAQ--MLN---GHQSCHGGQL--FSLADTAFAYACNSQG----LAAV-ASACTIDFLRPGFAG   91 (131)
T ss_dssp             EEEEEETT-EEEEEEECCGG--GBC---TTSBBCHHHH--HHHHHHHHHHHHHTTT----CCCE-EEEEEEEECSCCBTT
T ss_pred             EEEEEECC-EEEEEEECCHH--HCC---CCCCCCCEEH--HHHHHHHHHHHHHHCC----CCEE-EEEEEEEEECCCCCC
T ss_conf             99998399-99999991799--989---9995867502--4689999999997269----8528-888654685256889


Q ss_pred             CEEEEEEEEEEEECCEEEEEEEEEE-CCEEEEEEEEEEE
Q ss_conf             8899999999720777999999999-9999998999999
Q gi|254780770|r  111 DRLEYHVNKVRNRVDLWKFQCCAKV-ENTVVAEAEICAM  148 (161)
Q Consensus       111 d~L~i~~~i~~~~~~~~~~~~~~~v-~~~~va~a~l~~~  148 (161)
                      +.+++++++.+..+.+..++++++. +|+++|.++=+.+
T Consensus        92 ~~l~~~a~v~~~gr~~~~~~~~v~~~~g~lvA~~~Gt~y  130 (131)
T d2fs2a1          92 DTLTATAQVRHQGKQTGVYDIEIVNQQQKTVALFRGKSH  130 (131)
T ss_dssp             CEEEEEEEEEEECSSEEEEEEEEECTTSCEEEEEEEEEE
T ss_pred             CEEEEEEEEEECCCCEEEEEEEEEECCCCEEEEEEEEEE
T ss_conf             799999999993887999999999489989999997981


No 26 
>d1ylia1 d.38.1.1 (A:11-152) Putative acyl-coa thioester hydrolase HI0827 {Haemophilus influenzae [TaxId: 727]}
Probab=97.47  E-value=0.0017  Score=38.50  Aligned_cols=85  Identities=14%  Similarity=0.126  Sum_probs=64.0

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEECCEEEEEEEEEEEECCEEEEEEEEEEC-------C-
Q ss_conf             56699998634634544329977630267752364136002212888999999997207779999999999-------9-
Q gi|254780770|r   66 GVLILEGMAQTAGAICAIHNGFDQYAPPYLMSIDKARFRKPVFPGDRLEYHVNKVRNRVDLWKFQCCAKVE-------N-  137 (161)
Q Consensus        66 GvLliE~maQ~~~~l~~~~~~~~~~~~~~l~~i~~~kF~~~V~PGd~L~i~~~i~~~~~~~~~~~~~~~v~-------~-  137 (161)
                      |=.+++-|-.++++.+....    +...+.++++++.|++|+..||.|++++++....+....+.++++..       + 
T Consensus        26 GG~l~~~~D~~a~~~A~~~~----~~~~vt~~vd~i~F~~pv~~Gd~l~~~a~v~~~G~sSm~V~v~v~~~~~~~~~~ge  101 (142)
T d1ylia1          26 GGWIMSQMDMGGAILAKEIA----HGRVVTVAVESMNFIKPISVGDVVCCYGQCLKVGRSSIKIKVEVWVKKVASEPIGE  101 (142)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH----TSCEEEEEECCEECCSCCCTTCEEEEEEEEEEECSSEEEEEEEEEEECCSSSSTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHC----CCCCCEEEEEEEEEEECCCCCCEEEEEEEEEECCCCEEEEEEEEEEECCCCCCCCE
T ss_conf             89999999999999999863----99862899835898730256728999999965156307898999997255576675


Q ss_pred             -EEEEEEEEEEEEECCCC
Q ss_conf             -99998999999844520
Q gi|254780770|r  138 -TVVAEAEICAMVMHEKK  154 (161)
Q Consensus       138 -~~va~a~l~~~i~~~~~  154 (161)
                       +.+++|.|+++-++++-
T Consensus       102 ~~~v~~a~ftfV~vd~~g  119 (142)
T d1ylia1         102 RYCVTDAVFTFVAVDNNG  119 (142)
T ss_dssp             EEEEEEEEEEEEEBCTTS
T ss_pred             EEEEEEEEEEEEEECCCC
T ss_conf             999999999999989997


No 27 
>d2bi0a2 d.38.1.4 (A:186-337) Hypothetical protein Rv0216/MT0226 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.47  E-value=0.00069  Score=40.90  Aligned_cols=88  Identities=14%  Similarity=0.137  Sum_probs=56.4

Q ss_pred             HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEECCEEEEEEEEEEEE----CCEEEE
Q ss_conf             3134799950225669999863463454432997763026775236413600221288899999999720----777999
Q gi|254780770|r   54 FMGHFPGRPVMPGVLILEGMAQTAGAICAIHNGFDQYAPPYLMSIDKARFRKPVFPGDRLEYHVNKVRNR----VDLWKF  129 (161)
Q Consensus        54 f~gHFp~~PvmPGvLliE~maQ~~~~l~~~~~~~~~~~~~~l~~i~~~kF~~~V~PGd~L~i~~~i~~~~----~~~~~~  129 (161)
                      ++.++-+.++.+|.+.+ +++...  +.. ...   + .....+.+++||.+||+|||+|..++++...+    .+...+
T Consensus        53 ~D~~~ag~ria~G~lt~-sl~~gl--~~~-~~~---~-~~~~lg~~~~rf~~PV~~GDti~~~~eV~~~~~~~~~g~v~~  124 (152)
T d2bi0a2          53 HDWRVSGRRLVYGGHTI-GLALAQ--ATR-LLP---N-LATVLDWESCDHTAPVHEGDTLYSELHIESAQAHADGGVLGL  124 (152)
T ss_dssp             TCTTTTSSCCCCHHHHH-HHHHHH--HHH-HST---T-CCEEEEEEEEEECSCCCTTCEEEEEEEEEEEEECSSSEEEEE
T ss_pred             CCHHHHHCCCCCHHHHH-HHHHHE--EEE-CCC---H-HHHHHEEEEEEECCCCCCCCEEEEEEEEEEEEECCCCCEEEE
T ss_conf             39889707773278899-868643--341-340---3-433324302698264779998899999988767489978999


Q ss_pred             EEEEEE-------CCEEEEEEEEEEEE
Q ss_conf             999999-------99999989999998
Q gi|254780770|r  130 QCCAKV-------ENTVVAEAEICAMV  149 (161)
Q Consensus       130 ~~~~~v-------~~~~va~a~l~~~i  149 (161)
                      +..+..       .++.|.+.++++.+
T Consensus       125 r~~v~~~~~~~~q~~~~VL~~~~t~L~  151 (152)
T d2bi0a2         125 RSLVYAVSDSASEPDRQVLDWRFSALQ  151 (152)
T ss_dssp             EEEEEECCSSTTSCCEEEEEEEEEEEE
T ss_pred             EEEEEECCCCCCCCCCEEEEEEEEEEE
T ss_conf             999998667666799889999987264


No 28 
>d2oiwa1 d.38.1.1 (A:1-131) GK1870 orthologue {Bacillus stearothermophilus [TaxId: 1422]}
Probab=97.43  E-value=0.0011  Score=39.68  Aligned_cols=64  Identities=6%  Similarity=0.002  Sum_probs=54.2

Q ss_pred             EEEECCCCEEEEEEEECCEEEEEEEEEEEECCEEEEEEEEEECCEEEEEEEEEEEEECCCCCCC
Q ss_conf             7752364136002212888999999997207779999999999999998999999844520023
Q gi|254780770|r   94 YLMSIDKARFRKPVFPGDRLEYHVNKVRNRVDLWKFQCCAKVENTVVAEAEICAMVMHEKKEKN  157 (161)
Q Consensus        94 ~l~~i~~~kF~~~V~PGd~L~i~~~i~~~~~~~~~~~~~~~v~~~~va~a~l~~~i~~~~~e~~  157 (161)
                      ....--+++|++++.+||.+++++.+.+.++..+.+...+..+|+++|+|+.+.+.++-+..+.
T Consensus        50 ~~v~~~~~~y~~~~~~gd~i~i~~~~~~~~~~s~~~~~~i~~~g~~~a~~~~~~v~~d~~~~k~  113 (131)
T d2oiwa1          50 MVIIRMEVDYVNQMYYGQDVTVYTGIERIGNTSLTIYEEIHQNGVVCAKGRSVYVNFNFDTGRP  113 (131)
T ss_dssp             EEEEEEEEEECSCCCTTSCEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEEEEEETTTTEE
T ss_pred             EEEEEEEEEEEECCCCCCCCEEEEEEEECCCEEEEEEEEEECCCEEEEEEEEEEEEEECCCCCC
T ss_conf             5989999998752567876204799986597499999999959999999999999999999946


No 29 
>d1vpma_ d.38.1.1 (A:) Acyl-CoA hydrolase BH0798 {Bacillus halodurans [TaxId: 86665]}
Probab=97.43  E-value=0.00069  Score=40.90  Aligned_cols=86  Identities=17%  Similarity=0.195  Sum_probs=63.3

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEECCEEEEEEEEEEEECCEEEEEEEEEEC------
Q ss_conf             02256699998634634544329977630267752364136002212888999999997207779999999999------
Q gi|254780770|r   63 VMPGVLILEGMAQTAGAICAIHNGFDQYAPPYLMSIDKARFRKPVFPGDRLEYHVNKVRNRVDLWKFQCCAKVE------  136 (161)
Q Consensus        63 vmPGvLliE~maQ~~~~l~~~~~~~~~~~~~~l~~i~~~kF~~~V~PGd~L~i~~~i~~~~~~~~~~~~~~~v~------  136 (161)
                      +.=|. +++-|-.+|++.+....    +.....++++++.|++||.+||.|.+++++....+....+.++++..      
T Consensus        28 l~GG~-ll~~~D~~a~~~a~~~~----~~~~vt~~vd~i~F~~Pv~~Gd~l~~~a~V~~~G~sS~~V~v~v~~~~~~~~~  102 (155)
T d1vpma_          28 IFGGK-VLAYIDEIAALTAMKHA----NSAVVTASIDSVDFKSSATVGDALELEGFVTHTGRTSMEVYVRVHSNNLLTGE  102 (155)
T ss_dssp             BCHHH-HHHHHHHHHHHHHHHHH----TSEEEEEEECCCCCCSCCBTTEEEEEEEEEEEECSSEEEEEEEEEEEETTTCC
T ss_pred             CHHHH-HHHHHHHHHHHHHHHHC----CCCCEEEEEEEEEEEECCCCCCEEEEEEEEEEECCCEEEEEEEEEEECCCCCC
T ss_conf             91899-99999999999999744----89855999966887402167847999999998046129998999995289992


Q ss_pred             CEEEEEEEEEEEEECCC
Q ss_conf             99999899999984452
Q gi|254780770|r  137 NTVVAEAEICAMVMHEK  153 (161)
Q Consensus       137 ~~~va~a~l~~~i~~~~  153 (161)
                      .++++++-|+++-++++
T Consensus       103 ~~~~~~~~ftfVavd~~  119 (155)
T d1vpma_         103 RTLTTESFLTMVAVDES  119 (155)
T ss_dssp             EEEEEEEEEEEEEECTT
T ss_pred             EEEEEEEEEEEEEECCC
T ss_conf             89976799999997689


No 30 
>d2oafa1 d.38.1.1 (A:1-143) Hypothetical protein Jann0674 {Jannaschia sp. ccs1 [TaxId: 290400]}
Probab=97.39  E-value=0.00053  Score=41.60  Aligned_cols=66  Identities=14%  Similarity=0.093  Sum_probs=55.6

Q ss_pred             EEEEEECCCCEEEEEEEECCEEEEEEEEEEEECCEEEEEEEEEECCEEEEEEEEEEEEECCCCCCC
Q ss_conf             267752364136002212888999999997207779999999999999998999999844520023
Q gi|254780770|r   92 PPYLMSIDKARFRKPVFPGDRLEYHVNKVRNRVDLWKFQCCAKVENTVVAEAEICAMVMHEKKEKN  157 (161)
Q Consensus        92 ~~~l~~i~~~kF~~~V~PGd~L~i~~~i~~~~~~~~~~~~~~~v~~~~va~a~l~~~i~~~~~e~~  157 (161)
                      .++...--+++|++++.+||.+++++.+.+.++....+...+..+|+++|+|+.+.+.++.++.+.
T Consensus        61 ~~~~v~~~~~~y~~~~~~gd~l~v~~~v~~~~~~s~~~~~~~~~~~~~~a~~~~~~v~~d~~~~k~  126 (143)
T d2oafa1          61 VGTPFVRLEMDFKSPVTPRHILKCHTWPTRLGTKSITFRVDGVQDGVTCFVGAFTCVFTIADQFKS  126 (143)
T ss_dssp             EECCEEEEEEEECSCCCTTSCEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEEEEEEGGGTEE
T ss_pred             CCEEEEEEEEEEEEEEECCCEEEEEEEEEECCCEEEEEEEEEEECCEEEEEEEEEEEEEECCCCCC
T ss_conf             875999885278520118971699999973585389999999965314999999999998999915


No 31 
>d1vh9a_ d.38.1.5 (A:) Hypothetical protein YbdB {Escherichia coli [TaxId: 562]}
Probab=97.39  E-value=0.0041  Score=36.24  Aligned_cols=127  Identities=12%  Similarity=0.058  Sum_probs=76.7

Q ss_pred             HHHHHHHHHCCCCCCEE-EEE-EEEEEECCCEEEEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             41898998479997505-478-9999846974999998268883131347999502256699998634634544329977
Q gi|254780770|r   11 KDIVELMRFLPHRYPFL-LVD-KVVNIQRDESAIGIKNVTFNEPHFMGHFPGRPVMPGVLILEGMAQTAGAICAIHNGFD   88 (161)
Q Consensus        11 ~~~~eI~~~lPhr~Pfl-~ID-~i~~~~~g~~~~g~k~v~~~e~ff~gHFp~~PvmPGvLliE~maQ~~~~l~~~~~~~~   88 (161)
                      ++++++.+..+.  ||. +++ +++++++| +++....++.+  +..   | ..++=|=.+. +++-+++.++.......
T Consensus         8 ~tl~~l~~~~~~--~~~~~LGi~~~~~~~g-~~~~~~~v~~~--~~n---~-~g~~HGG~ia-tl~D~~~~~a~~~~~~~   77 (138)
T d1vh9a_           8 LTLDELNATSDN--TMVAHLGIVYTRLGDD-VLEAEMPVDTR--THQ---P-FGLLHGGASA-ALAETLGSMAGFMMTRD   77 (138)
T ss_dssp             CCHHHHHHTSTT--SHHHHTTCEEEEECSS-CEEEEEECSTT--TBC---T-TSSBCHHHHH-HHHHHHHHHHHHTTCCT
T ss_pred             CCHHHHHHHCCC--HHHHHCCCEEEEEECC-EEEEEEECCHH--HCC---C-CCCEECCHHH-HHHHHHHHHHHHHHCCC
T ss_conf             999999763723--3888569899999599-89999995999--929---9-9816140554-45778799999861345


Q ss_pred             CCEEEEEEECCCCEEEEEEEECCEEEEEEEEEEEECCEEEEEEEEEE-CCEEEEEEEEEEEEE
Q ss_conf             63026775236413600221288899999999720777999999999-999999899999984
Q gi|254780770|r   89 QYAPPYLMSIDKARFRKPVFPGDRLEYHVNKVRNRVDLWKFQCCAKV-ENTVVAEAEICAMVM  150 (161)
Q Consensus        89 ~~~~~~l~~i~~~kF~~~V~PGd~L~i~~~i~~~~~~~~~~~~~~~v-~~~~va~a~l~~~i~  150 (161)
                       +... ...--++.|.+|+.+| .++.++++.+..+.++.++++++- +|+++|.+..+++++
T Consensus        78 -~~~~-vT~~l~v~flrp~~~g-~l~a~a~v~~~Gr~~~~~e~~i~d~~g~lvA~a~~T~~il  137 (138)
T d1vh9a_          78 -GQCV-VGTELNATHHRPVSEG-KVRGVCQPLHLGRQNQSWEIVVFDEQGRRCCTCRLGTAVL  137 (138)
T ss_dssp             -TCCE-EEEEEEEEECSCCCSS-EEEEEEEEEEECSSEEEEEEEEECTTSCEEEEEEEEEEEC
T ss_pred             -CCCC-CCCCCCEEEEECCCCC-EEEEEEEEEECCCCEEEEEEEEECCCCCEEEEEEEEEEEE
T ss_conf             -6521-3012432697216897-6999999999278899999999928998999996999998


No 32 
>d1s9ca2 d.38.1.4 (A:10-163) 2-enoyl-coa hydratase domain of multifunctional peroxisomal hydratase-dehydrogenase-epimerase {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.22  E-value=0.00071  Score=40.83  Aligned_cols=96  Identities=10%  Similarity=0.068  Sum_probs=56.1

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEECCEEEEEEEEEEEE----CCEEEEEEE
Q ss_conf             4799950225669999863463454432997763026775236413600221288899999999720----777999999
Q gi|254780770|r   57 HFPGRPVMPGVLILEGMAQTAGAICAIHNGFDQYAPPYLMSIDKARFRKPVFPGDRLEYHVNKVRNR----VDLWKFQCC  132 (161)
Q Consensus        57 HFp~~PvmPGvLliE~maQ~~~~l~~~~~~~~~~~~~~l~~i~~~kF~~~V~PGd~L~i~~~i~~~~----~~~~~~~~~  132 (161)
                      +.|+..+.|.-..+=++............+..-.....|-+-++++|++|+.|||+|+.++++....    +-+......
T Consensus        41 ~~~~~~a~Ptf~~~~~~~~~~~~~~~~~~g~~~~~~~~lHgeq~~~~~rPi~~gd~l~~~~~v~~v~dk~~g~~~~~~~~  120 (154)
T d1s9ca2          41 GSSDFSCLPTFGVIIGQKSMMGGGLAEIPGLSINFAKVLHGEQYLELYKPLPRAGKLKCEAVVADVLDKGSGVVIIMDVY  120 (154)
T ss_dssp             TSTTCCCCGGGHHHHTGGGTC----------------CEEEEEEEEESSCCCSSEEEEEEEEEEEEC-----CEEEEEEE
T ss_pred             CCCCCCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEEEEEEEEECCCCCEEEEEEE
T ss_conf             79772036616014213333431132244878886638872526999268789999999999978997077520599999


Q ss_pred             EEECCEEEEEEEEEEEEECC
Q ss_conf             99999999989999998445
Q gi|254780770|r  133 AKVENTVVAEAEICAMVMHE  152 (161)
Q Consensus       133 ~~v~~~~va~a~l~~~i~~~  152 (161)
                      ...+|+++|+++.+.++...
T Consensus       121 ~~~~ge~v~t~~~t~~~RG~  140 (154)
T d1s9ca2         121 SYSEKELICHNQFSLFLVGS  140 (154)
T ss_dssp             EESSSSEEEEEEEEEEC---
T ss_pred             ECCCCCEEEEEEEEEEEECC
T ss_conf             91599399999999999867


No 33 
>d2cyea1 d.38.1.1 (A:1-132) Probable thioesterase TTHA1846 {Thermus thermophilus [TaxId: 274]}
Probab=97.21  E-value=0.0036  Score=36.59  Aligned_cols=55  Identities=11%  Similarity=0.116  Sum_probs=48.5

Q ss_pred             CCCEEEEEEEECCEEEEEEEEEEEECCEEEEEEEEEECCEEEEEEEEEEEEECCC
Q ss_conf             6413600221288899999999720777999999999999999899999984452
Q gi|254780770|r   99 DKARFRKPVFPGDRLEYHVNKVRNRVDLWKFQCCAKVENTVVAEAEICAMVMHEK  153 (161)
Q Consensus        99 ~~~kF~~~V~PGd~L~i~~~i~~~~~~~~~~~~~~~v~~~~va~a~l~~~i~~~~  153 (161)
                      -+++|++++.+||.+++.+.+.+.++....+...++.+++++|+++.+.+-.+..
T Consensus        58 ~~~~y~~~~~~gd~i~i~~~i~~~g~~s~~~~~~i~~~~~~~a~~~~~~v~~d~~  112 (132)
T d2cyea1          58 MEVDYLRPILLGDEVFVGVRTVGLGRSSLRMEHLVTANGESAAKGLGVLVWLEGG  112 (132)
T ss_dssp             EEEEECSCCBTTCEEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEEEEEETT
T ss_pred             EEEEECCCCCCCCCEEEEEEEEECCCEEEEEEEEEEECCEEEEEEEEEEEEECCC
T ss_conf             9999853663363208999999879879999999998999999999999998099


No 34 
>d1z54a1 d.38.1.1 (A:1-132) Probable thioesterase TTHA0908 {Thermus thermophilus [TaxId: 274]}
Probab=97.01  E-value=0.0027  Score=37.33  Aligned_cols=61  Identities=15%  Similarity=0.077  Sum_probs=51.3

Q ss_pred             EEEEEECCCCEEEEEEEECCEEEEEEEEEEEECCEEEEEEEEEECCEEEEEEEEEEEEECC
Q ss_conf             2677523641360022128889999999972077799999999999999989999998445
Q gi|254780770|r   92 PPYLMSIDKARFRKPVFPGDRLEYHVNKVRNRVDLWKFQCCAKVENTVVAEAEICAMVMHE  152 (161)
Q Consensus        92 ~~~l~~i~~~kF~~~V~PGd~L~i~~~i~~~~~~~~~~~~~~~v~~~~va~a~l~~~i~~~  152 (161)
                      ......-..++|++++.+||.+++++.+.+.++....+.-+++.+|+++|+|+.+.+-.+.
T Consensus        52 ~~~~v~~~~~~y~~~~~~~d~i~v~~~v~~i~~~s~~~~~~i~~~g~~~a~~~~~~v~~~~  112 (132)
T d1z54a1          52 VFFPVVELGLTFRAPARFGEVVEVRTRLAELSSRALLFRYRVEREGVLLAEGFTRHLCQVG  112 (132)
T ss_dssp             EECCEEEEEEEECSCCCTTCEEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEEECEES
T ss_pred             CEEEEEEEEEEEHHHCCCCCEEEEEEEEEECCCEEEEEEEEEEECCEEEEEEEEEEEECCC
T ss_conf             5069998876422127988689998899874978999999999899999999999999159


No 35 
>d2fuja1 d.38.1.1 (A:5-122) Hypothetical protein XCC1147 {Xanthomonas campestris pv. campestris [TaxId: 340]}
Probab=96.95  E-value=0.0054  Score=35.52  Aligned_cols=66  Identities=5%  Similarity=0.070  Sum_probs=53.5

Q ss_pred             EEEEEECCCCEEEEEEEECCEEEEEEEEEEEECCEEEEEEEEEEC---CEEEEEEEEEEEEECCCCCCC
Q ss_conf             267752364136002212888999999997207779999999999---999998999999844520023
Q gi|254780770|r   92 PPYLMSIDKARFRKPVFPGDRLEYHVNKVRNRVDLWKFQCCAKVE---NTVVAEAEICAMVMHEKKEKN  157 (161)
Q Consensus        92 ~~~l~~i~~~kF~~~V~PGd~L~i~~~i~~~~~~~~~~~~~~~v~---~~~va~a~l~~~i~~~~~e~~  157 (161)
                      ......--+++|++|+.+||.+.+++.+.+..+....+.-+++..   ++++|+|+.+.+.++.++.|+
T Consensus        50 ~~~vv~~~~~~y~~~~~~~d~v~v~~~~~~~g~~s~~~~~~i~~~~~~~~~~a~g~~~~V~vD~~t~ks  118 (118)
T d2fuja1          50 IAPVVAATNVNYKRPLVWPNDILVELFVERLGSSSVTIGHRILDQKDEGVLYSDGNVVVVWIDTQTGKS  118 (118)
T ss_dssp             SEEEEEEEEEEECSCCCTTCCEEEEEEEEEECSSEEEEEEEEEESSCTTCEEEEEEEEEEEESSSCCCC
T ss_pred             EEEEEEEEEEECCCCCCCCCCEEEEEEEEEECCEEEEEEEEEEECCCCCEEEEEEEEEEEEEECCCCCC
T ss_conf             616989323000834447982499999999288299999999998999799999999999998101789


No 36 
>d1s5ua_ d.38.1.1 (A:) Hypothetical protein YbgC {Escherichia coli [TaxId: 562]}
Probab=96.81  E-value=0.0039  Score=36.42  Aligned_cols=66  Identities=21%  Similarity=0.208  Sum_probs=53.8

Q ss_pred             EEEEEECCCCEEEEEEEECCEEEEEEEEEEEECCEEEEEEEEE-ECCEEEEEEEEEEEEECCCCCCC
Q ss_conf             2677523641360022128889999999972077799999999-99999998999999844520023
Q gi|254780770|r   92 PPYLMSIDKARFRKPVFPGDRLEYHVNKVRNRVDLWKFQCCAK-VENTVVAEAEICAMVMHEKKEKN  157 (161)
Q Consensus        92 ~~~l~~i~~~kF~~~V~PGd~L~i~~~i~~~~~~~~~~~~~~~-v~~~~va~a~l~~~i~~~~~e~~  157 (161)
                      ......--+++|++++..||.+++++.+.+.++....+.-++. .+|+++|+|+.+.+.++.++.+.
T Consensus        52 ~~~~v~~~~~~y~~~~~~~d~l~v~~~i~~~~~~s~~~~~~i~~~~g~~~a~~~~~~v~vd~~~~r~  118 (129)
T d1s5ua_          52 VAFVVRKMTVEYYAPARLDDMLEIQTEITSMRGTSLVFTQRIVNAENTLLNEAEVLVVCVDPLKMKP  118 (129)
T ss_dssp             CEEEEEEEEEEECSCCCTTCEEEEEEEEEEECSSEEEEEEEEECTTCCEEEEEEEEEEEEETTTTEE
T ss_pred             EEEEEEEEEEEEECCCCCCCEEEEEEEEEECCCEEEEEEEEEECCCCEEEEEEEEEEEEEECCCCEE
T ss_conf             2479999821321033478155577899983874999999999489969999999999999999928


No 37 
>d1njka_ d.38.1.1 (A:) Hypothetical protein YbaW {Escherichia coli [TaxId: 562]}
Probab=96.78  E-value=0.0085  Score=34.37  Aligned_cols=66  Identities=18%  Similarity=0.173  Sum_probs=54.3

Q ss_pred             EEEEEECCCCEEEEEEEECCEEEEEEEEEEEECCEEEEEEEEEE--CCEEEEEEEEEEEEECCCCCCC
Q ss_conf             26775236413600221288899999999720777999999999--9999998999999844520023
Q gi|254780770|r   92 PPYLMSIDKARFRKPVFPGDRLEYHVNKVRNRVDLWKFQCCAKV--ENTVVAEAEICAMVMHEKKEKN  157 (161)
Q Consensus        92 ~~~l~~i~~~kF~~~V~PGd~L~i~~~i~~~~~~~~~~~~~~~v--~~~~va~a~l~~~i~~~~~e~~  157 (161)
                      ......--+++|++|+..||.+++++.+.+..+....+.-.+..  +|+++|+|+.+.+.++.++-+.
T Consensus        50 ~~~vv~~~~i~y~~p~~~gd~l~v~~~i~~~~~~s~~~~~~i~~~~~g~~~a~~~~~~v~vd~~~~k~  117 (133)
T d1njka_          50 IAFVVVNININYRRPAVLSDLLTITSQLQQLNGKSGILSQVITLEPEGQVVADALITFVCIDLKTQKA  117 (133)
T ss_dssp             EEEEEEEEEEEECSCCCTTCEEEEEEEEEEEETTEEEEEEEEEETTTTEEEEEEEEEEEEEETTTTEE
T ss_pred             CEEEEEEEEEHHHHCCCCCCCEEEEEEEEECCCCEEEEEEEEEECCCCEEEEEEEEEEEEEECCCCCC
T ss_conf             54788630001210323231102677887449709999999999899969999999999999999959


No 38 
>d2gf6a1 d.38.1.1 (A:1-134) Hypothetical protein SSO2295 {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=96.76  E-value=0.017  Score=32.62  Aligned_cols=66  Identities=18%  Similarity=0.219  Sum_probs=55.1

Q ss_pred             EEEEEECCCCEEEEEEEECCEEEEEEEEEEEECCEEEEEEEEEECCEEEEEEEEEEEEECCCCCCC
Q ss_conf             267752364136002212888999999997207779999999999999998999999844520023
Q gi|254780770|r   92 PPYLMSIDKARFRKPVFPGDRLEYHVNKVRNRVDLWKFQCCAKVENTVVAEAEICAMVMHEKKEKN  157 (161)
Q Consensus        92 ~~~l~~i~~~kF~~~V~PGd~L~i~~~i~~~~~~~~~~~~~~~v~~~~va~a~l~~~i~~~~~e~~  157 (161)
                      ..+...-..++|++++.+||.+.+.+.+.+.++....+.-++..||+++|+|....+.++.++.+.
T Consensus        55 ~~~~v~~~~~~y~~~~~~~d~v~v~~~~~~~~~~s~~~~~~i~~~g~~~a~~~~~~v~~d~~~~~~  120 (134)
T d2gf6a1          55 LWFVIAESHAIYHRPVKLGDKLTVLLNPKILSNKTIKFEFKVLKDGELTTEGYVIQIAINPKIWKS  120 (134)
T ss_dssp             EEEEEEEEEEEECSCCCTTCEEEEEEEEEECSSSEEEEEEEEEETTEEEEEEEEEEEEEETTTTEE
T ss_pred             CCEEEEEEEEEEECCCCCCCCCEEEEEEEEECCEEEEEEEEEECCCEEEEEEEEEEEEEECCCCCC
T ss_conf             605899976676214423332014668862088799999999519889999999999999999938


No 39 
>d1pn2a2 d.38.1.4 (A:152-275) 2-enoyl-coa hydratase domain of multifunctional peroxisomal hydratase-dehydrogenase-epimerase {Yeast (Candida tropicalis) [TaxId: 5482]}
Probab=96.58  E-value=0.0059  Score=35.31  Aligned_cols=107  Identities=24%  Similarity=0.310  Sum_probs=61.3

Q ss_pred             CCCCCCEEEEEEEEEEECCCEEEEEEEECCCC-------HHHC-CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCE
Q ss_conf             79997505478999984697499999826888-------3131-347999502256699998634634544329977630
Q gi|254780770|r   20 LPHRYPFLLVDKVVNIQRDESAIGIKNVTFNE-------PHFM-GHFPGRPVMPGVLILEGMAQTAGAICAIHNGFDQYA   91 (161)
Q Consensus        20 lPhr~Pfl~ID~i~~~~~g~~~~g~k~v~~~e-------~ff~-gHFp~~PvmPGvLliE~maQ~~~~l~~~~~~~~~~~   91 (161)
                      .|-|.|=+-++..+.   . ....+..+|.|-       .|-+ ..|+ .|+.+|.+..=.+++   .+.....      
T Consensus         5 ~p~~~Pd~~~~~~t~---~-d~~~~~~lSGD~NPiH~D~~~A~~~g~~-~~IahG~~~~~~~~~---~l~~~~~------   70 (124)
T d1pn2a2           5 APKRAPDYQVDVPVS---E-DLAALYRLSGDRNPLHIDPNFAKGAKFP-KPILHGMCTYGLSAK---ALIDKFG------   70 (124)
T ss_dssp             CCSSCCSEEEEEECC---T-THHHHHGGGSCCCGGGTCHHHHHHTTCS-SCCCCHHHHHHHHHH---HHHHHHC------
T ss_pred             CCCCCCCEEEEECCC---H-HHHHHHHHHCCCCCEECCHHHHHHCCCC-CCEEHHHHHHHHHHH---HHHHHCC------
T ss_conf             889999858975177---8-7999999878996258678898456899-724325789999988---6554336------


Q ss_pred             EEEEEECCCCEEEEEEEECCEEEEEEEEEEEECCEEEEEEEEEECCEEEEEEEE
Q ss_conf             267752364136002212888999999997207779999999999999998999
Q gi|254780770|r   92 PPYLMSIDKARFRKPVFPGDRLEYHVNKVRNRVDLWKFQCCAKVENTVVAEAEI  145 (161)
Q Consensus        92 ~~~l~~i~~~kF~~~V~PGd~L~i~~~i~~~~~~~~~~~~~~~v~~~~va~a~l  145 (161)
                        .+.. .++||.+||+|||+|+++++.  ...+...+++++..+|+++.++..
T Consensus        71 --~~~~-~~~rF~~PV~~gdtl~~~~~~--~~~~~v~~~~~v~~~g~~vl~~~~  119 (124)
T d1pn2a2          71 --MFNE-IKARFTGIVFPGETLRVLAWK--ESDDTIVFQTHVVDRGTIAINNAA  119 (124)
T ss_dssp             --CEEE-EEEEECSCCCTTCEEEEEEEE--CSSSEEEEEEEETTTTEEEEEEEE
T ss_pred             --CCCE-EEEEECCCCCCCCEEEEEEEE--ECCCEEEEEEEEEECCEEEEECEE
T ss_conf             --5403-999987899999999999999--369989999999769979996919


No 40 
>d2nuja1 d.38.1.1 (A:3-161) Hypothetical protein Jann_1972 {Jannaschia sp. CCS1 [TaxId: 290400]}
Probab=96.58  E-value=0.022  Score=31.84  Aligned_cols=64  Identities=5%  Similarity=0.029  Sum_probs=51.2

Q ss_pred             EEECCCCEEEEEEEECCEEEEEEEEEEEECCEEEEEEEEEE---CCEEEEEEEEEEEEECCCCCCCC
Q ss_conf             75236413600221288899999999720777999999999---99999989999998445200234
Q gi|254780770|r   95 LMSIDKARFRKPVFPGDRLEYHVNKVRNRVDLWKFQCCAKV---ENTVVAEAEICAMVMHEKKEKNE  158 (161)
Q Consensus        95 l~~i~~~kF~~~V~PGd~L~i~~~i~~~~~~~~~~~~~~~v---~~~~va~a~l~~~i~~~~~e~~~  158 (161)
                      ...--+++|++++.+||++++++.+.+.++....+..++..   +++++|+++.+.+.++.+..+.-
T Consensus        74 vv~~~~i~y~~p~~~gd~v~v~~~v~~~~~~s~~~~~~i~~~~~~~~~~a~~~~~~V~vd~~~~k~~  140 (159)
T d2nuja1          74 VLKQVHCTYLAEMGMGEDYVITGRVSNFRTTSFTMEFACWRLGDAVECTSEGSAVVVLLNRDGSGRY  140 (159)
T ss_dssp             EEEEEEEEECSCCCTTCEEEEEEEEEEECSSEEEEEEEEEECSSSCEEEEEEEEEEEEECTTSSSBC
T ss_pred             EEEEEEEEEECCCCCCCEEEEEEEEEECCCCEEEEEEEEEEECCCCEEEEEEEEEEEEEECCCCCCC
T ss_conf             4017999996145668379999988845985999999999943673379999999999989999482


No 41 
>d1c8ua1 d.38.1.3 (A:2-115) Thioesterase II (TesB) {Escherichia coli [TaxId: 562]}
Probab=96.56  E-value=0.021  Score=32.05  Aligned_cols=82  Identities=11%  Similarity=-0.046  Sum_probs=59.7

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEECCEEEEEEEEEEEECCEEEEEEEEEECCEEEEEEE
Q ss_conf             25669999863463454432997763026775236413600221288899999999720777999999999999999899
Q gi|254780770|r   65 PGVLILEGMAQTAGAICAIHNGFDQYAPPYLMSIDKARFRKPVFPGDRLEYHVNKVRNRVDLWKFQCCAKVENTVVAEAE  144 (161)
Q Consensus        65 PGvLliE~maQ~~~~l~~~~~~~~~~~~~~l~~i~~~kF~~~V~PGd~L~i~~~i~~~~~~~~~~~~~~~v~~~~va~a~  144 (161)
                      .++..-..+||+..+.. .+-+  .+..   ...-.+-|.++..|+.-++++|+..+..+++..-.+++.-+|+++..+.
T Consensus        31 ~~vfGG~v~AQal~AA~-~tv~--~~~~---~hSlh~yFl~~g~~~~pi~y~V~~lrdGrsf~tR~V~a~Q~g~~if~~~  104 (114)
T d1c8ua1          31 RQVFGGQVVGQALYAAK-ETVP--EERL---VHSFHSYFLRPGDSKKPIIYDVETLRDGNSFSARRVAAIQNGKPIFYMT  104 (114)
T ss_dssp             SBCCHHHHHHHHHHHHH-HTSC--TTCE---EEEEEEEECSCCBTTSCEEEEEEEEEECSSEEEEEEEEEETTEEEEEEE
T ss_pred             CCEEHHHHHHHHHHHHH-HHCC--CCCC---CCCCCEEECCCCCCCCCEEEEEEEEECCCCEEEEEEEEEECCEEEEEEE
T ss_conf             62214999999999999-6478--9987---5216438537878999889986886368716999999998998889999


Q ss_pred             EEEEEECC
Q ss_conf             99998445
Q gi|254780770|r  145 ICAMVMHE  152 (161)
Q Consensus       145 l~~~i~~~  152 (161)
                      .+|..+++
T Consensus       105 ~SF~~~e~  112 (114)
T d1c8ua1         105 ASFQAPEA  112 (114)
T ss_dssp             EEEECCCC
T ss_pred             EECCCCCC
T ss_conf             75268999


No 42 
>d2o5ua1 d.38.1.1 (A:5-143) Hypothetical thioesterase PA5185 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=96.49  E-value=0.017  Score=32.59  Aligned_cols=67  Identities=10%  Similarity=0.123  Sum_probs=53.5

Q ss_pred             EEEEEEECCCCEEEEEEEECCEEEEEEEEEEEECCEEEEEEEEEE--CCEEEEEEEEEEEEECCCCCCC
Q ss_conf             026775236413600221288899999999720777999999999--9999998999999844520023
Q gi|254780770|r   91 APPYLMSIDKARFRKPVFPGDRLEYHVNKVRNRVDLWKFQCCAKV--ENTVVAEAEICAMVMHEKKEKN  157 (161)
Q Consensus        91 ~~~~l~~i~~~kF~~~V~PGd~L~i~~~i~~~~~~~~~~~~~~~v--~~~~va~a~l~~~i~~~~~e~~  157 (161)
                      .......--+++|++++.+||++.+.+.+.+.++....+.-.++.  +++++|+|..+.+.++.+..+.
T Consensus        56 ~~~~~v~~~~~~y~~p~~~~d~v~v~~~i~~~~~~s~~~~~~i~~~~~~~~~a~g~~~~v~~d~~~~k~  124 (139)
T d2o5ua1          56 EVIGLVVSSSCDYFAPVAFPQRIEMGLRVARLGNSSVQYELALFLEGQREACAAGRFVHVFVERRSSRP  124 (139)
T ss_dssp             SEEEEEEEEEEEECSCCCTTSCEEEEEEEEEECSSEEEEEEEEEESSCCBCSEEEEEEEEEEETTTCCB
T ss_pred             CCEEEEEEEEEEECCCCCCCCEEEEEEEEEECCCCEEEEEEEEEECCCCCEEEEEEEEEEEEECCCCCC
T ss_conf             850488899999817767897689999986069877999999999999909999999999998999959


No 43 
>d2owna1 d.38.1.8 (A:3-149) Putative oleoyl-ACP thioesterase LP0708 {Lactobacillus plantarum [TaxId: 1590]}
Probab=96.49  E-value=0.016  Score=32.70  Aligned_cols=65  Identities=5%  Similarity=-0.040  Sum_probs=51.7

Q ss_pred             EEEEEECCCCEEEEEEEECCEEEEEEEEEEEECCEEEEEEEEEE-CCEEEEEEEEEEEEECCCCCC
Q ss_conf             26775236413600221288899999999720777999999999-999999899999984452002
Q gi|254780770|r   92 PPYLMSIDKARFRKPVFPGDRLEYHVNKVRNRVDLWKFQCCAKV-ENTVVAEAEICAMVMHEKKEK  156 (161)
Q Consensus        92 ~~~l~~i~~~kF~~~V~PGd~L~i~~~i~~~~~~~~~~~~~~~v-~~~~va~a~l~~~i~~~~~e~  156 (161)
                      ......--+++|++++..||++++++.+...++....+.-.+.. +|+++++|+.+.+.++.++.+
T Consensus        58 ~~~vv~~~~i~y~~~~~~~d~l~V~t~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~v~id~~~rr  123 (147)
T d2owna1          58 VGWVVTQYAIDITRMPRQDEVVTIAVRGSAYNPYFAYREFWIRDADGQQLAYITSIWVMMSQTTRR  123 (147)
T ss_dssp             EEEEEEEEEEEESSCCBTTCEEEEEEEEEEECSSCEEEEEEEECTTCCEEEEEEEEEEEEETTTCS
T ss_pred             CEEEEEEEEEEEECCCCCCCEEEEEEEEEECCCCEEEEEEEEEECCCCEEEEEEEEEEEEECCCCC
T ss_conf             316888887327046405879877998852587589999999958998888799999999999996


No 44 
>d2hlja1 d.38.1.1 (A:1-156) Hypothetical protein PP0301 {Pseudomonas putida [TaxId: 303]}
Probab=96.47  E-value=0.026  Score=31.42  Aligned_cols=68  Identities=7%  Similarity=-0.020  Sum_probs=54.6

Q ss_pred             EEEEEECCCCEEEEEEEECCEEEEEEEEEEEECCEEEEEEEEEE--CCEEEEEEEEEEEEECCCCCCCCC
Q ss_conf             26775236413600221288899999999720777999999999--999999899999984452002344
Q gi|254780770|r   92 PPYLMSIDKARFRKPVFPGDRLEYHVNKVRNRVDLWKFQCCAKV--ENTVVAEAEICAMVMHEKKEKNES  159 (161)
Q Consensus        92 ~~~l~~i~~~kF~~~V~PGd~L~i~~~i~~~~~~~~~~~~~~~v--~~~~va~a~l~~~i~~~~~e~~~~  159 (161)
                      ...+..-.+++|++++..||.+.+++.+....+....+..++..  +++++|+++...+-++.++-|.-+
T Consensus        54 ~~~vv~~~~i~y~~~l~~gd~i~V~~~i~~~~~~~~~~~~~i~~~~~~~l~a~~~~~~v~vD~~trk~~~  123 (156)
T d2hlja1          54 NSLFTLEAHINYLHEVKLGTEVWVQTQILGFDRKRLHVYHSLHRAGFDEVLAASEQMLLHVDLAGPQSAP  123 (156)
T ss_dssp             TTEEEEEEEEEECSCCBTTCEEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEEEEEEBCC---CBCC
T ss_pred             CCHHHHHHEEEECCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCCHHHHEEEEEEEEEEEECCCCCCCC
T ss_conf             2102201001212234435442899852046774178776520232024001546999999889997778


No 45 
>d2alia1 d.38.1.1 (A:5-134) Hypothetical protein PA2801 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=96.29  E-value=0.026  Score=31.42  Aligned_cols=64  Identities=8%  Similarity=0.031  Sum_probs=50.5

Q ss_pred             EEECCCCEEEEEEEECCEEEEEEEEEEEECCEEEEEEEEEEC---CEEEEEEEEEEEEECCCCCCCC
Q ss_conf             752364136002212888999999997207779999999999---9999989999998445200234
Q gi|254780770|r   95 LMSIDKARFRKPVFPGDRLEYHVNKVRNRVDLWKFQCCAKVE---NTVVAEAEICAMVMHEKKEKNE  158 (161)
Q Consensus        95 l~~i~~~kF~~~V~PGd~L~i~~~i~~~~~~~~~~~~~~~v~---~~~va~a~l~~~i~~~~~e~~~  158 (161)
                      +..-.+++|++|+..||.+++.+.+.+.......+.-+++..   +.++|+|+.+.+.++-+..+.-
T Consensus        53 vv~~~~~~y~~~~~~~d~~~v~~~v~~ig~~s~~~~~~i~~~~~~~~~~a~~~~~~v~~d~~~~k~~  119 (130)
T d2alia1          53 VVLQSLHTYLKPVVHPATVVVELYAGRLGTSSLVLEHRLHTLEDPQGTYGEGHCKLVWVRHAENRST  119 (130)
T ss_dssp             EEEEEEEEECSCCCSSCEEEEEEEEEEECSSEEEEEEEEEESSCTTSCCEEEEEEEEEEEGGGTEEC
T ss_pred             CHHHHHHHHCCCCCCCCCEEEEEEEEECCCCEEEEEEEEEECCCCCEEEEEEEEEEEEEECCCCCCC
T ss_conf             0156553321123578733899999866983999999999979998899999999999989999584


No 46 
>d1tbua1 d.38.1.3 (A:13-116) Peroxisomal long-chain acyl-CoA thioesterase 1, TES1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.28  E-value=0.027  Score=31.34  Aligned_cols=78  Identities=21%  Similarity=0.151  Sum_probs=56.4

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEECCEEEEEEEEEEEECCEEEEEEEEEECCEEEEEEEE
Q ss_conf             56699998634634544329977630267752364136002212888999999997207779999999999999998999
Q gi|254780770|r   66 GVLILEGMAQTAGAICAIHNGFDQYAPPYLMSIDKARFRKPVFPGDRLEYHVNKVRNRVDLWKFQCCAKVENTVVAEAEI  145 (161)
Q Consensus        66 GvLliE~maQ~~~~l~~~~~~~~~~~~~~l~~i~~~kF~~~V~PGd~L~i~~~i~~~~~~~~~~~~~~~v~~~~va~a~l  145 (161)
                      |+..--.+||+..+.  ... .+.+..   ...=.+-|.++..|+..++++++..+..+++..-.+++.-+|+++.++..
T Consensus        27 ~~fGG~~~Aqal~Aa--~~t-v~~~~~---~~Slh~~Fl~pg~~~~pi~~~Ve~lrdGrsf~~r~V~a~Q~g~~~~~~~a  100 (104)
T d1tbua1          27 GTFGGTLVSQSLLAS--LHT-VPLNFF---PTSLHSYFIKGGDPRTKITYHVQNLRNGRNFIHKQVSAYQHDKLIFTSMI  100 (104)
T ss_dssp             -CCHHHHHHHHHHHH--HTT-SCTTCE---EEEEEEEECSCCCTTSCCEEEEEEEEECSSEEEEEEEEEETTEEEEEEEE
T ss_pred             CEEHHHHHHHHHHHH--HHH-CCCCCC---CEEEEEEEECCCCCCCEEEEEEEEEECCCCEEEEEEEEEECCEEEEEEEE
T ss_conf             248899999999999--841-886455---24588998548899830999987522796589999999999998999999


Q ss_pred             EEEE
Q ss_conf             9998
Q gi|254780770|r  146 CAMV  149 (161)
Q Consensus       146 ~~~i  149 (161)
                      +|.+
T Consensus       101 SF~v  104 (104)
T d1tbua1         101 LFAV  104 (104)
T ss_dssp             EEEC
T ss_pred             EEEC
T ss_conf             9859


No 47 
>d2essa1 d.38.1.8 (A:1-149) Acyl-ACP thioesterase {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=96.19  E-value=0.014  Score=33.03  Aligned_cols=65  Identities=5%  Similarity=-0.056  Sum_probs=52.6

Q ss_pred             EEEEEECCCCEEEEEEEECCEEEEEEEEEEEECCEEEEEEEEEE-CCEEEEEEEEEEEEECCCCCC
Q ss_conf             26775236413600221288899999999720777999999999-999999899999984452002
Q gi|254780770|r   92 PPYLMSIDKARFRKPVFPGDRLEYHVNKVRNRVDLWKFQCCAKV-ENTVVAEAEICAMVMHEKKEK  156 (161)
Q Consensus        92 ~~~l~~i~~~kF~~~V~PGd~L~i~~~i~~~~~~~~~~~~~~~v-~~~~va~a~l~~~i~~~~~e~  156 (161)
                      ......--+++|++++..||++++++.+....+....+...++. +|+++|+|+...+.++.++.|
T Consensus        57 ~~~vv~~~~i~y~~~~~~gd~v~V~t~~~~~~~~~~~~~~~i~~~~g~~ia~a~~~~v~id~~t~k  122 (149)
T d2essa1          57 YTWVLSRLAIELDEMPYQYEKFSVQTWVENVYRLFTDRNFAVIDKDGKKIGYARSVWAMINLNTRK  122 (149)
T ss_dssp             EEEEEEEEEEEESCCCBTTCEEEEEEEEEEECSSEEEEEEEEECTTSCEEEEEEEEEEEEETTTCC
T ss_pred             CEEEEEEEEEEEEECCCCCCEEEEEEEEEEECCCEEEEEEEEEECCCCEEEEEEEEEEEEECCCCC
T ss_conf             447999999998003524866667887765056168999999706996788888999999889997


No 48 
>d1pn2a1 d.38.1.4 (A:4-151) 2-enoyl-coa hydratase domain of multifunctional peroxisomal hydratase-dehydrogenase-epimerase {Yeast (Candida tropicalis) [TaxId: 5482]}
Probab=96.14  E-value=0.018  Score=32.44  Aligned_cols=58  Identities=5%  Similarity=0.000  Sum_probs=41.5

Q ss_pred             EEEECCCCEEEE-EEEECCEEEEEEEEEE--EECCE--EEEEEEEEE--CCEEEEEEEEEEEEEC
Q ss_conf             775236413600-2212888999999997--20777--999999999--9999998999999844
Q gi|254780770|r   94 YLMSIDKARFRK-PVFPGDRLEYHVNKVR--NRVDL--WKFQCCAKV--ENTVVAEAEICAMVMH  151 (161)
Q Consensus        94 ~l~~i~~~kF~~-~V~PGd~L~i~~~i~~--~~~~~--~~~~~~~~v--~~~~va~a~l~~~i~~  151 (161)
                      .|-+-...+|++ |+.+|++|+.+.++..  .+++.  ...+.+.+-  +|+++|+.+.+.++..
T Consensus        68 lLHGeQ~~~~h~~Pip~g~~l~~~~ri~~V~dKg~galv~~~~~~~d~~~Gelv~t~~st~~iRG  132 (148)
T d1pn2a1          68 LLHGEHYLKVHSWPPPTEGEIKTTFEPIATTPKGTNVVIVHGSKSVDNKSGELIYSNEATYFIRN  132 (148)
T ss_dssp             EEEEEEEEEECSSSCCSSEEEEEEEEEEEEEEETTEEEEEEEEEEEETTTCCEEEEEEEEEEETT
T ss_pred             EEECEEEEEEEECCCCCCCEEEEEEEEEEEEECCCCCEEEEEEEEEECCCCCEEEEEEEEEEEEC
T ss_conf             23541599996058898678999989989998389729999999998999969999989999988


No 49 
>d1lo7a_ d.38.1.1 (A:) 4-hydroxybenzoyl-CoA thioesterase {Pseudomonas sp., CBS-3 [TaxId: 306]}
Probab=96.07  E-value=0.013  Score=33.19  Aligned_cols=54  Identities=13%  Similarity=-0.001  Sum_probs=45.1

Q ss_pred             CCCEEEEEEEECCEEEEEEEEEEEECCEEEEEEEEEE-----CCEEEEEEEEEEEEECC
Q ss_conf             6413600221288899999999720777999999999-----99999989999998445
Q gi|254780770|r   99 DKARFRKPVFPGDRLEYHVNKVRNRVDLWKFQCCAKV-----ENTVVAEAEICAMVMHE  152 (161)
Q Consensus        99 ~~~kF~~~V~PGd~L~i~~~i~~~~~~~~~~~~~~~v-----~~~~va~a~l~~~i~~~  152 (161)
                      -+++|++|+..||.+++++.+.+..+....+.-+++.     +++++++|+.+.+.+..
T Consensus        63 ~~~~y~~~~~~~d~l~v~~~v~~~g~~s~~~~~~i~~~~~~~~~~~~~~a~~~~v~v~~  121 (140)
T d1lo7a_          63 CNASFVCTASYDDVLTIETCIKEWRRKSFVQRHSVSRTTPGGDVQLVMRADEIRVFAMN  121 (140)
T ss_dssp             EEEEECSCCCTTCEEEEEEEEEEECSSEEEEEEEEEEECTTSCEEEEEEEEEEEEEEEE
T ss_pred             EEEEEECCCCCCCEEEEEEEEEECCCEEEEEEEEEEECCCCCCCEEEEEEEEEEEEEEC
T ss_conf             88768812379977999999987399899999999998668895799999999999967


No 50 
>d2owna2 d.38.1.8 (A:150-258) Putative oleoyl-ACP thioesterase LP0708 {Lactobacillus plantarum [TaxId: 1590]}
Probab=96.07  E-value=0.02  Score=32.17  Aligned_cols=94  Identities=15%  Similarity=0.098  Sum_probs=57.1

Q ss_pred             EEEEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEECCEEEEEEEE
Q ss_conf             49999982688831313479995022566999986346345443299776302677523641360022128889999999
Q gi|254780770|r   40 SAIGIKNVTFNEPHFMGHFPGRPVMPGVLILEGMAQTAGAICAIHNGFDQYAPPYLMSIDKARFRKPVFPGDRLEYHVNK  119 (161)
Q Consensus        40 ~~~g~k~v~~~e~ff~gHFp~~PvmPGvLliE~maQ~~~~l~~~~~~~~~~~~~~l~~i~~~kF~~~V~PGd~L~i~~~i  119 (161)
                      ..+--..|...|-=..||-- +..+-.. +.|++.+-    ...      .  ..+. --+++|++++..||++++.+.+
T Consensus        11 ~~~~~~~Vr~~D~D~~gHVn-N~~Y~~~-~~e~~~~~----~~~------~--~~v~-~~~i~Y~~~~~~gd~v~v~t~v   75 (109)
T d2owna2          11 TITKPYHVRFFDIDPNRHVN-NAHYFDW-LVDTLPAT----FLL------Q--HDLV-HVDVRYENEVKYGQTVTAHANI   75 (109)
T ss_dssp             CEEEEEECCGGGBCTTSSBC-GGGHHHH-HHHHSCHH----HHH------T--EEEE-EEEEEECSCCCTTCEEEEEEEE
T ss_pred             CEEEEEEECHHHCCCCCCCC-CCHHHHH-HHHHHHHH----HHH------H--HHHH-HHHHHHHCCCCCCCEEEEEEEE
T ss_conf             08899885689958777154-7156999-99876776----531------1--5688-8766641756899839999999


Q ss_pred             EEEECC-EEEEEEEEEECCEEEEEEEEEEE
Q ss_conf             972077-79999999999999998999999
Q gi|254780770|r  120 VRNRVD-LWKFQCCAKVENTVVAEAEICAM  148 (161)
Q Consensus       120 ~~~~~~-~~~~~~~~~v~~~~va~a~l~~~  148 (161)
                      .+..+. ...+.-.+..+|+++|+|+++--
T Consensus        76 ~~~~~~s~~~~~~~i~~~g~~~a~A~i~W~  105 (109)
T d2owna2          76 LPSEVADQVTTSHLIEVDDEKCCEVTIQWR  105 (109)
T ss_dssp             ECCSSTTEEEEEEEEEETTEEEEEEEEEEE
T ss_pred             EECCCCEEEEEEEEEECCCEEEEEEEEEEE
T ss_conf             972783089999999679999999999958


No 51 
>d1t82a_ d.38.1.5 (A:) Putative thioesterase SO4397 {Shewanella oneidensis [TaxId: 70863]}
Probab=95.40  E-value=0.056  Score=29.44  Aligned_cols=126  Identities=11%  Similarity=0.070  Sum_probs=62.7

Q ss_pred             HHHHHHCCCCCCEE--EEEEEEEEECCCEEEEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH-HCCCCCCC
Q ss_conf             98998479997505--4789999846974999998268883131347999502256699998634634544-32997763
Q gi|254780770|r   14 VELMRFLPHRYPFL--LVDKVVNIQRDESAIGIKNVTFNEPHFMGHFPGRPVMPGVLILEGMAQTAGAICA-IHNGFDQY   90 (161)
Q Consensus        14 ~eI~~~lPhr~Pfl--~ID~i~~~~~g~~~~g~k~v~~~e~ff~gHFp~~PvmPGvLliE~maQ~~~~l~~-~~~~~~~~   90 (161)
                      +++++++=+.-||.  +==+|++++++ +++....+..|   . .|.  .-+.=|++.  +++-++++.+. ........
T Consensus         6 ~~l~~~~~~~iP~~~~lGi~i~~~~~~-~~~~~~pl~~n---~-N~~--gt~hgG~l~--tlad~a~g~~~~~~~~~~~~   76 (143)
T d1t82a_           6 NRLRQTWHSTIPVSEFMQIAPLSFTDG-ELSVSAPLAPN---I-NLH--HTMFAGSIY--TIMTLTGWGMVWLQQQLLNV   76 (143)
T ss_dssp             HHHHHHHHHHCHHHHHTTCEEEEEETT-EEEEECCSGGG---B-CTT--SSBCHHHHH--HHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHCCHHHHCCCEEEEECCC-EEEEEEECCCC---C-CCC--CCEEHHHHH--HHHHHHHHHHHHHHHHHCCC
T ss_conf             999999986199578729699997297-69997102135---4-888--817615568--77888899999998765588


Q ss_pred             EEEEEEECCCCEEEEEEEECCEEEEEEEEE--------EEECCEEEEEEEEEECCEEEEEEEEEEEEE
Q ss_conf             026775236413600221288899999999--------720777999999999999999899999984
Q gi|254780770|r   91 APPYLMSIDKARFRKPVFPGDRLEYHVNKV--------RNRVDLWKFQCCAKVENTVVAEAEICAMVM  150 (161)
Q Consensus        91 ~~~~l~~i~~~kF~~~V~PGd~L~i~~~i~--------~~~~~~~~~~~~~~v~~~~va~a~l~~~i~  150 (161)
                      .......--+++|++|+.-+  ++.++++.        +..+....++++++.||+++|+++=++++.
T Consensus        77 ~~~~v~~~~~i~ylrP~~~~--~~a~a~~~~~~~~~l~~~gr~~~~~~v~v~d~g~~vA~~~Gty~v~  142 (143)
T d1t82a_          77 DGDIVLADAHIRYLAPVTSA--PEVKVRWPDTNLSPLQRGRKAKVKLEVQLFCDGKLCAQFDGLYVSV  142 (143)
T ss_dssp             CCEEEEEEEEEEECSCCCSC--CEEEEECCSCCCGGGGGTCCEEEEEEEEEEETTEEEEEEEEEEEEE
T ss_pred             CCCHHEEEEEEEEECCCCCC--CEEEEEECHHHHHHHHCCCEEEEEEEEEEEECCEEEEEEEEEEEEE
T ss_conf             85232001788895144667--3899996256667886298079999999998999999999999971


No 52 
>d2ov9a1 d.38.1.5 (A:7-209) Hypothetical protein RHA1_ro05818 {Rhodococcus sp. RHA1 [TaxId: 101510]}
Probab=92.85  E-value=0.28  Score=25.26  Aligned_cols=52  Identities=10%  Similarity=-0.039  Sum_probs=43.8

Q ss_pred             EECCCCEEEEEEEECCEEEEEEEEEEEECCEEEEEEEEEE-CCEEEEEEEEEE
Q ss_conf             5236413600221288899999999720777999999999-999999899999
Q gi|254780770|r   96 MSIDKARFRKPVFPGDRLEYHVNKVRNRVDLWKFQCCAKV-ENTVVAEAEICA  147 (161)
Q Consensus        96 ~~i~~~kF~~~V~PGd~L~i~~~i~~~~~~~~~~~~~~~v-~~~~va~a~l~~  147 (161)
                      ..-=+++|++++..|+.|++++++.+..+.....+++++. +|+++++|+=.|
T Consensus       149 T~~L~i~y~~p~~~g~~l~~~a~v~~~~~r~~~~~~~i~~~dG~l~A~a~g~f  201 (203)
T d2ov9a1         149 TAQLSTRYHRPTPLFEPLTLTGKLMSVDGRKITTAGDIRTADGQVCVSVEGLF  201 (203)
T ss_dssp             EEEEEEEECSCCBSSSEEEEEEEEEEEETTEEEEEEEEECTTCCEEEEEEEEE
T ss_pred             EEEEEEEEEECCCCCCEEEEEEEEEEECCCEEEEEEEEEECCCCEEEEEEEEE
T ss_conf             46789999615677978999999999679799999999969999999999999


No 53 
>d2essa2 d.38.1.8 (A:150-247) Acyl-ACP thioesterase {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=92.25  E-value=0.15  Score=26.91  Aligned_cols=45  Identities=16%  Similarity=0.332  Sum_probs=32.1

Q ss_pred             CCEEEEEEEECCEEEEEEEEEEEECCEEEEEEEEEECCEEEEEEEEEE
Q ss_conf             413600221288899999999720777999999999999999899999
Q gi|254780770|r  100 KARFRKPVFPGDRLEYHVNKVRNRVDLWKFQCCAKVENTVVAEAEICA  147 (161)
Q Consensus       100 ~~kF~~~V~PGd~L~i~~~i~~~~~~~~~~~~~~~v~~~~va~a~l~~  147 (161)
                      ++.|++++.+||++++.+......  ...+.- -..|++++|+|++..
T Consensus        53 ~i~Y~~e~~~gd~v~v~t~~~~~~--~~~~~~-~~~g~e~~~~a~~~w   97 (98)
T d2essa2          53 EMAYVAESYFGDELSFFCDEVSEN--EFHVEV-KKNGSEVVCRSKVIF   97 (98)
T ss_dssp             EEEECSCCBTTCEEEEEEEEEETT--EEEEEE-EETTTEEEEEEEEEE
T ss_pred             EEEECCCCCCCCEEEEEEEECCCC--EEEEEE-EECCCEEEEEEEEEE
T ss_conf             999827657999999999993583--799999-974999999999998


No 54 
>d1sh8a_ d.38.1.5 (A:) Hypothetical protein PA5026 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=92.15  E-value=0.23  Score=25.75  Aligned_cols=126  Identities=15%  Similarity=0.111  Sum_probs=68.3

Q ss_pred             HHHHHHCCCCCCEEE--EEEEEEEECCCEEEEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC-CCCCCC
Q ss_conf             989984799975054--78999984697499999826888313134799950225669999863463454432-997763
Q gi|254780770|r   14 VELMRFLPHRYPFLL--VDKVVNIQRDESAIGIKNVTFNEPHFMGHFPGRPVMPGVLILEGMAQTAGAICAIH-NGFDQY   90 (161)
Q Consensus        14 ~eI~~~lPhr~Pfl~--ID~i~~~~~g~~~~g~k~v~~~e~ff~gHFp~~PvmPGvLliE~maQ~~~~l~~~~-~~~~~~   90 (161)
                      +-+.++.-++.||.-  ==++.++++| +++....++++.    .|+ | -+.=|++.  +++-++++++... .... .
T Consensus         7 e~~~~l~~~~~pf~~~~Gi~v~~~~~g-~~~l~~p~~~~~----N~~-G-~~hGG~~~--tl~D~a~~~a~~~~~~~~-~   76 (153)
T d1sh8a_           7 ELARHLTEEKIAFVQRSGLRAEVLEPG-YVRLRMPGAGNE----NHI-G-SMYAGALF--TLAELPGGALFLTSFDSA-R   76 (153)
T ss_dssp             HHHHHHHHHSSHHHHHHTCEEEEEETT-EEEEEECSTTCB----CTT-S-SBCHHHHH--HHHHTHHHHHHHHHSCTT-T
T ss_pred             HHHHHHHHCCCHHHHHCCCEEEEEECC-EEEEEEECCHHH----CCC-C-CCHHHHHH--HHHHHHHHHHHHHHCCCC-C
T ss_conf             999999873075999759699999699-999999855542----898-8-18999999--999999999999857866-5


Q ss_pred             EEEEEEECCCCEEEEEEEECCEEEEEEEE------------EEEECCEEEEEEEEEE-CCEEEEEEEEEEEEECC
Q ss_conf             02677523641360022128889999999------------9720777999999999-99999989999998445
Q gi|254780770|r   91 APPYLMSIDKARFRKPVFPGDRLEYHVNK------------VRNRVDLWKFQCCAKV-ENTVVAEAEICAMVMHE  152 (161)
Q Consensus        91 ~~~~l~~i~~~kF~~~V~PGd~L~i~~~i------------~~~~~~~~~~~~~~~v-~~~~va~a~l~~~i~~~  152 (161)
                      .. ....--+++|.+|+. |+ ++.++++            .+..+....++++++- +|++||++..++.+...
T Consensus        77 ~~-~~t~~~~i~f~~pa~-g~-~~~~~~~~~~~~~~~~~~~~~~gr~~~~~~v~i~d~~g~lvA~~~~~~~i~~~  148 (153)
T d1sh8a_          77 FY-PIVKEMTLRFRRPAK-GD-IRVEARLDAERIRQLETEAGERGKAEYSLELQLTDEQGEVVAESAALYQLRSH  148 (153)
T ss_dssp             EE-EEEEEEEEEECSCCC-SC-EEEEEECCHHHHHHHHHHHHHHSEEEEEEEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred             CE-EEEEEEEEEEECCCC-CC-EEEEEEECHHHHHHHHHHEEECCCEEEEEEEEEECCCCCEEEEEEEEEEECCC
T ss_conf             23-562000125521456-75-79999966898766542024457379999999994999999999999999789


No 55 
>d1yoca1 d.38.1.5 (A:1-145) Hypothetical protein PA1835 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=90.87  E-value=0.47  Score=23.90  Aligned_cols=119  Identities=16%  Similarity=0.087  Sum_probs=63.7

Q ss_pred             HHHHCCCCCCEEEEEEEEEEECCCEEEEEEEECCCCHHHCCCCCCCCCCCHHH--HHHHHHHHHHHHHHHCCCCCCCEEE
Q ss_conf             99847999750547899998469749999982688831313479995022566--9999863463454432997763026
Q gi|254780770|r   16 LMRFLPHRYPFLLVDKVVNIQRDESAIGIKNVTFNEPHFMGHFPGRPVMPGVL--ILEGMAQTAGAICAIHNGFDQYAPP   93 (161)
Q Consensus        16 I~~~lPhr~Pfl~ID~i~~~~~g~~~~g~k~v~~~e~ff~gHFp~~PvmPGvL--liE~maQ~~~~l~~~~~~~~~~~~~   93 (161)
                      +.+..|.-.-  +==++++++|| ++.....++   +-+..|+  .-+-=|++  +.|..   +++.+....+.  +. .
T Consensus        20 ~~~~~P~~~~--lg~~v~~~~~g-~~~~~lp~~---~~~~N~~--g~~HGG~l~tlaD~a---~g~a~~~~~~~--~~-~   85 (145)
T d1yoca1          20 IGQFAPYFAS--IAPQFVELRPG-YAEVTFPKR---REVLNHI--GTVHAIALCNAAELA---AGTMTDASIPA--GH-R   85 (145)
T ss_dssp             HHHHSGGGGG--GCCEEEEEETT-EEEEEECCC---GGGBCTT--SSBCHHHHHHHHHHH---HHHHHHHHSCT--TE-E
T ss_pred             HHHHCCHHHH--CCCEEEEEECC-EEEEEEECC---HHHHCCC--CCEEHHHHHHHHHHH---HHHHHHHHCCC--CC-E
T ss_conf             8644793552--38499999799-999999805---7983877--717577889999999---99888631786--64-0


Q ss_pred             EEEECCCCEEEEEEEECCEEEEEEEEEEEE---CCEEEEEEEEEECCEEEEEEEEEEEEE
Q ss_conf             775236413600221288899999999720---777999999999999999899999984
Q gi|254780770|r   94 YLMSIDKARFRKPVFPGDRLEYHVNKVRNR---VDLWKFQCCAKVENTVVAEAEICAMVM  150 (161)
Q Consensus        94 ~l~~i~~~kF~~~V~PGd~L~i~~~i~~~~---~~~~~~~~~~~v~~~~va~a~l~~~i~  150 (161)
                      .+..--++.|.+|+. |+ ++.++++...+   .......+.+..+|++||++.+++.+.
T Consensus        86 ~~t~~l~i~ylrpa~-g~-~~a~a~~~~~~~~~~~~~~v~v~~~~~~~~Va~a~~t~~v~  143 (145)
T d1yoca1          86 WIPRGMTVEYLAKAT-GD-VRAVADGSQIDWQATGNLVVPVVAYVDDKPVFRAEITMYVS  143 (145)
T ss_dssp             EEEEEEEEEECSCCC-SC-EEEEEECTTSCTTCCEEEEEEEEEEETTEEEEEEEEEEEEE
T ss_pred             EEEEEEEEEEEECCC-CC-EEEEEEEEEHEECCEEEEEEEEEEECCCCEEEEEEEEEEEE
T ss_conf             588766778710137-87-89999985110053238999999985997899999999996


No 56 
>d1d2ea2 b.44.1.1 (A:349-451) Elongation factor Tu (EF-Tu) {Cow (Bos taurus), mitochondrial [TaxId: 9913]}
Probab=71.12  E-value=2.9  Score=19.16  Aligned_cols=50  Identities=12%  Similarity=0.185  Sum_probs=34.1

Q ss_pred             EEEEECCEEEEEEEEEEE---ECCEEEEEEEEEECCEEEEEEEEEEEEECCCCCCC
Q ss_conf             022128889999999972---07779999999999999998999999844520023
Q gi|254780770|r  105 KPVFPGDRLEYHVNKVRN---RVDLWKFQCCAKVENTVVAEAEICAMVMHEKKEKN  157 (161)
Q Consensus       105 ~~V~PGd~L~i~~~i~~~---~~~~~~~~~~~~v~~~~va~a~l~~~i~~~~~e~~  157 (161)
                      ..+.|||...+.+++.+.   ..+.   .-.++-++++|+.|.++-.+.....+++
T Consensus        48 ~~v~PGd~~~v~~~l~~P~~le~g~---rF~iREggrTVg~GvVteil~~~~~~~~  100 (103)
T d1d2ea2          48 ELAMPGEDLKLTLILRQPMILEKGQ---RFTLRDGNRTIGTGLVTDTPAMTEEDKN  100 (103)
T ss_dssp             CCBCTTCEEEEEEEEEEEECCCTTC---EEEEEETTEEEEEEEEEECCCCCHHHHT
T ss_pred             CCCCCCCCEEEEEEECCCEEECCCC---EEEEEECCEEEEEEEEEECCCCCCHHHH
T ss_conf             3015678458999988736030898---8999879988999999975576562543


No 57 
>d1c8ua2 d.38.1.3 (A:116-286) Thioesterase II (TesB) {Escherichia coli [TaxId: 562]}
Probab=60.96  E-value=4.8  Score=17.84  Aligned_cols=57  Identities=16%  Similarity=0.126  Sum_probs=46.3

Q ss_pred             EEEEECCC-CEEEEEEEECCEEEEEEEEEEEECCEEEEEEEEE-ECCEEEEEEEEEEEE
Q ss_conf             67752364-1360022128889999999972077799999999-999999989999998
Q gi|254780770|r   93 PYLMSIDK-ARFRKPVFPGDRLEYHVNKVRNRVDLWKFQCCAK-VENTVVAEAEICAMV  149 (161)
Q Consensus        93 ~~l~~i~~-~kF~~~V~PGd~L~i~~~i~~~~~~~~~~~~~~~-v~~~~va~a~l~~~i  149 (161)
                      ...++.+. +-|++++.+.+-+.++.+.....++.+...|+++ -+|++||+..=.+.+
T Consensus       109 ~~~aSLDH~~wFH~~~~~~~WlL~~~~s~~a~~gRgl~~g~i~~~dG~LvAs~~QEgl~  167 (171)
T d1c8ua2         109 IQIATIDHSMWFHRPFNLNEWLLYSVESTSASSARGFVRGEFYTQDGVLVASTVQEGVM  167 (171)
T ss_dssp             EEEEEEEEEEEECSCCCTTSCEEEEEEEEEEETTEEEEEEEEEETTCCEEEEEEEEEEE
T ss_pred             EEEEEEEEEEEEECCCCCCEEEEEEEECCCCCCCEEEEEEEEECCCCCEEEEEEEEEEE
T ss_conf             04676206799845766640289987876413871389999999999999998888899


No 58 
>d2hj1a1 d.15.3.4 (A:11-87) Hypothetical protein HI0395 {Haemophilus influenzae [TaxId: 727]}
Probab=50.19  E-value=7.2  Score=16.76  Aligned_cols=50  Identities=12%  Similarity=0.076  Sum_probs=31.9

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEECCEEEEE
Q ss_conf             2566999986346345443299776302677523641360022128889999
Q gi|254780770|r   65 PGVLILEGMAQTAGAICAIHNGFDQYAPPYLMSIDKARFRKPVFPGDRLEYH  116 (161)
Q Consensus        65 PGvLliE~maQ~~~~l~~~~~~~~~~~~~~l~~i~~~kF~~~V~PGd~L~i~  116 (161)
                      .|+-+-|++.|++..-..-.......+.+.++...  +.-..+.+||+++++
T Consensus        24 ~GtTv~~Ai~~Sgi~~~fpeidl~~~~vGIfGk~v--~~~~~L~~gDRVEIY   73 (77)
T d2hj1a1          24 EGITVQTAITQSGILSQFPEIDLSTNKIGIFSRPI--KLTDVLKEGDRIEIY   73 (77)
T ss_dssp             TTCBHHHHHHHHTHHHHCTTCCTTTSEEEEEECSC--CTTCBCCTTCEEEEC
T ss_pred             CCCCHHHHHHHCCCHHHCCCCCCCCCCEEEECCCC--CCCCCCCCCCEEEEE
T ss_conf             98949999987596756966564646270788473--887707899999995


No 59 
>d1yt8a1 c.46.1.2 (A:107-242) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=37.44  E-value=11  Score=15.69  Aligned_cols=48  Identities=19%  Similarity=0.231  Sum_probs=31.4

Q ss_pred             HHHHHHHHCCCCCCEEEEEEEEEEECCCEEEEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             1898998479997505478999984697499999826888313134799950225669999863
Q gi|254780770|r   12 DIVELMRFLPHRYPFLLVDKVVNIQRDESAIGIKNVTFNEPHFMGHFPGRPVMPGVLILEGMAQ   75 (161)
Q Consensus        12 ~~~eI~~~lPhr~Pfl~ID~i~~~~~g~~~~g~k~v~~~e~ff~gHFp~~PvmPGvLliE~maQ   75 (161)
                      ..+|+.++|-...+.++||                ++..+.|-.||.|+.=.+|..-+.+.+.+
T Consensus        27 s~~el~~~l~~~~~~~liD----------------vR~~~e~~~ghIpGAi~ip~~~l~~~~~~   74 (136)
T d1yt8a1          27 AAEEVQALLDARAEAVILD----------------ARRFDEYQTMSIPGGISVPGAELVLRVAE   74 (136)
T ss_dssp             CHHHHHHHHHTTCSEEEEE----------------CSCHHHHHHSBCTTCEECCGGGHHHHHHH
T ss_pred             CHHHHHHHHHCCCCCEEEE----------------CCCHHHCCCEECCCCHHHHHHHHHHHHHC
T ss_conf             9999999985589828997----------------49804505323077001456677777521


No 60 
>d1yt8a2 c.46.1.2 (A:6-106) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=36.05  E-value=7.7  Score=16.59  Aligned_cols=45  Identities=18%  Similarity=0.121  Sum_probs=31.3

Q ss_pred             HHHHHHHCCCCCCEEEEEEEEEEECCCEEEEEEEECCCCHHHCCCCCCCCCCCHHHHHHHH
Q ss_conf             8989984799975054789999846974999998268883131347999502256699998
Q gi|254780770|r   13 IVELMRFLPHRYPFLLVDKVVNIQRDESAIGIKNVTFNEPHFMGHFPGRPVMPGVLILEGM   73 (161)
Q Consensus        13 ~~eI~~~lPhr~Pfl~ID~i~~~~~g~~~~g~k~v~~~e~ff~gHFp~~PvmPGvLliE~m   73 (161)
                      .+|+++.|-.+.++++||                ++..+.|-+||.|+.=.+|..-.-+.+
T Consensus         6 ~~~l~~~l~~~~~~~liD----------------vR~~~e~~~ghIpgAi~~~~~~~~~~~   50 (101)
T d1yt8a2           6 FHDIRAALLARRELALLD----------------VREEDPFAQAHPLFAANLPLSRLELEI   50 (101)
T ss_dssp             HHHHHHHHHHTCCBEEEE----------------CSCHHHHTTSBCTTCEECCGGGHHHHH
T ss_pred             HHHHHHHHHCCCCEEEEE----------------CCCHHHHHHCCCCCCCCCCCCCHHHHH
T ss_conf             999999987799829997----------------988799974568885100110102333


No 61 
>d2c78a2 b.44.1.1 (A:313-405) Elongation factor Tu (EF-Tu) {Thermus thermophilus [TaxId: 274]}
Probab=33.42  E-value=13  Score=15.17  Aligned_cols=41  Identities=17%  Similarity=0.383  Sum_probs=27.2

Q ss_pred             EEEEECCEEEEEEEEEEE---ECCEEEEEEEEEECCEEEEEEEEEEE
Q ss_conf             022128889999999972---07779999999999999998999999
Q gi|254780770|r  105 KPVFPGDRLEYHVNKVRN---RVDLWKFQCCAKVENTVVAEAEICAM  148 (161)
Q Consensus       105 ~~V~PGd~L~i~~~i~~~---~~~~~~~~~~~~v~~~~va~a~l~~~  148 (161)
                      ..+.|||...+..++.+.   ..+.   .-..+-++++|+.|.++-.
T Consensus        48 ~~v~PGd~~~v~l~l~~p~~le~g~---rF~iREgg~Tvg~GvIt~i   91 (93)
T d2c78a2          48 EMVMPGDNVTFTVELIKPVALEEGL---RFAIREGGRTVGAGVVTKI   91 (93)
T ss_dssp             CCBCTTCEEEEEEEEEEEEEECTTC---EEEEEETTEEEEEEEEEEE
T ss_pred             EEECCCCEEEEEEEECCCEEECCCC---EEEEEECCEEEEEEEEEEE
T ss_conf             1871354178999976648982899---8999989989999999996


Done!