HHsearch alignment for GI: 254780771 and conserved domain: PRK09677
>PRK09677 putative lipopolysaccharide biosynthesis O-acetyl transferase WbbJ; Provisional.
Probab=99.30 E-value=3.6e-12 Score=84.83 Aligned_cols=125 Identities=20% Similarity=0.269 Sum_probs=57.1
Q ss_pred CCCCCCCCEEHHHCCC----CCCEEEECCCCCCCCHHC--CCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEECCCCCCC
Q ss_conf 2334420000110011----232033112210000000--2332100233220233100244201000002321344543
Q gi|254780771|r 129 VKIEDGVVIAPMAVVY----PGVEIGRKTYVGPGSVIG--AGVRIGRNCSIGAGSSIYSSLIGNSVILHSGVRIGNDGFG 202 (347)
Q Consensus 129 a~I~~~v~I~~~~~I~----~~v~IG~~~~I~~~~~I~--~~~~IG~~~~I~~~~~I~~~iIG~~~~I~~~~vIG~~GFg 202 (347)
T Consensus 44 I~~g~~~~~g~~~rl~~~~~gkl~IGdNv~Ig~~~~I~~~~~I~IG~nVlIa~~V~I~d-----------------~nH~ 106 (192)
T PRK09677 44 INFGEGFTSGVGLRLDAFGRGKLFFGDNVQVNDYVHIACIESITIGRDTLIASKVFITD-----------------HNHG 106 (192)
T ss_pred EEECCCEEECCCEEEEEECCCEEEECCCCEECCCCEEEECCCEEECCCCEECCCEEEEC-----------------CCCC
T ss_conf 68789619668779997067508999984899985898677679899868879889967-----------------8887
Q ss_pred CCCCCC--CCCCCC------CCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEE
Q ss_conf 355666--531104------443200002444454444332222221111122211123444465035771886555650
Q gi|254780771|r 203 YARGVS--DIHKIV------HIGRVIIQDKVEIGANSAIDRGTIDDTIIGENTKIDNQVQIGHNVHIGCGCIIVSQVGIA 274 (347)
Q Consensus 203 f~~~~~--~~~~~~------~~G~v~Ig~~v~IG~n~tIdrg~~~~t~Ig~~~~id~~v~i~hn~~iG~~~~~~~~~~~~ 274 (347)
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~pv~Ig~~~wIg~~~~Il---------------------------------------- 146 (192)
T PRK09677 107 SFKHSDDFSSPNLPPDMRTLESSAVVIGQRVWIGENVTIL---------------------------------------- 146 (192)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEECCCCEEE----------------------------------------
T ss_conf 6555454345676821266775998989998999999991----------------------------------------
Q ss_pred CCCEECCCCEEEECCEEECCEEECCCCEECCC-CEEEEE
Q ss_conf 36365697297306878378598888898625-326000
Q gi|254780771|r 275 GSTYIGDNVLIGGQCGIAGYLKIGDNVQIASK-SGVLKD 312 (347)
Q Consensus 275 g~~~ig~~~~ig~~~~i~~~v~ig~~~~i~a~-s~v~~~ 312 (347)
T Consensus 147 ~Gv~Ig~~~vvgA~SvV~~d--vp~~~i~~G~PAk~Ik~ 183 (192)
T PRK09677 147 PGVSIGNGCIVGANSVVTKS--IPENTVIAGNPAKIIKK 183 (192)
T ss_pred CCCEECCCCEECCCCEECCC--CCCCEEEEEECCEEEEE
T ss_conf 99699999899169999858--59991999708388971