HHsearch alignment for GI: 254780771 and conserved domain: PRK10773

>PRK10773 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed.
Probab=98.27  E-value=2.1e-06  Score=53.60  Aligned_cols=87  Identities=17%  Similarity=0.364  Sum_probs=70.3

Q ss_pred             CCCHHHHHHHHCCEEECCCCCCEEECCCC-CHHHCCCCCEEEEC-------CHHHHHHHHHCCCEEEEECHHHHHCCCCC
Q ss_conf             80399999984669955776633871567-98888998699961-------86767777545856999887761014445
Q gi|254780771|r   12 GIALMKLAQSIGASLLDENFGERMIYSLS-PIARASTGDISYII-------SRKFLNNIEKCKASAIICSQDIVPFIPKN   83 (347)
Q Consensus        12 ~~sl~eIa~~l~~~l~g~~~~d~~I~~I~-~l~~A~~~~IsFi~-------~~kyl~~l~~s~A~aiI~~~d~~~~~~~~   83 (347)
T Consensus         3 ~~~l~~ia~~~~g~l~~~---d~~i~~i~~DSR~v~~g~l-FvAl~G~~~DGh~fi~~Ai~~GA~aiv~~~~~----~~~   74 (452)
T PRK10773          3 SVTLSQLADILNAELQGA---DITIDAVTTDTRKVTPGCL-FVALKGERFDAHDFADQAKAAGAGALLVSRPL----DID   74 (452)
T ss_pred             CCCHHHHHHHHCCEEECC---CCCEEEEEECCCCCCCCCE-EEEECCCCCCHHHHHHHHHHCCCEEEEECCCC----CCC
T ss_conf             476999999869999889---8157789965871799988-99944798997999999998699899984766----899


Q ss_pred             CCCEECCCCCHHHHHHCCCCCCC
Q ss_conf             53100123201122101211122
Q gi|254780771|r   84 IPCLLSDKPEVSFAIAGSILYPQ  106 (347)
Q Consensus        84 ~~~Iiv~nP~~afA~i~~~l~~~  106 (347)
T Consensus        75 ~~~i~V~d~~~al~~la~~~~~~   97 (452)
T PRK10773         75 LPQLIVKDTRLAFGQLAAWVRQQ   97 (452)
T ss_pred             CCEEEECCHHHHHHHHHHHHHHC
T ss_conf             99899899999999999987515