HHsearch alignment for GI: 254780771 and conserved domain: PRK10773
>PRK10773 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed.
Probab=98.27 E-value=2.1e-06 Score=53.60 Aligned_cols=87 Identities=17% Similarity=0.364 Sum_probs=70.3
Q ss_pred CCCHHHHHHHHCCEEECCCCCCEEECCCC-CHHHCCCCCEEEEC-------CHHHHHHHHHCCCEEEEECHHHHHCCCCC
Q ss_conf 80399999984669955776633871567-98888998699961-------86767777545856999887761014445
Q gi|254780771|r 12 GIALMKLAQSIGASLLDENFGERMIYSLS-PIARASTGDISYII-------SRKFLNNIEKCKASAIICSQDIVPFIPKN 83 (347)
Q Consensus 12 ~~sl~eIa~~l~~~l~g~~~~d~~I~~I~-~l~~A~~~~IsFi~-------~~kyl~~l~~s~A~aiI~~~d~~~~~~~~ 83 (347)
T Consensus 3 ~~~l~~ia~~~~g~l~~~---d~~i~~i~~DSR~v~~g~l-FvAl~G~~~DGh~fi~~Ai~~GA~aiv~~~~~----~~~ 74 (452)
T PRK10773 3 SVTLSQLADILNAELQGA---DITIDAVTTDTRKVTPGCL-FVALKGERFDAHDFADQAKAAGAGALLVSRPL----DID 74 (452)
T ss_pred CCCHHHHHHHHCCEEECC---CCCEEEEEECCCCCCCCCE-EEEECCCCCCHHHHHHHHHHCCCEEEEECCCC----CCC
T ss_conf 476999999869999889---8157789965871799988-99944798997999999998699899984766----899
Q ss_pred CCCEECCCCCHHHHHHCCCCCCC
Q ss_conf 53100123201122101211122
Q gi|254780771|r 84 IPCLLSDKPEVSFAIAGSILYPQ 106 (347)
Q Consensus 84 ~~~Iiv~nP~~afA~i~~~l~~~ 106 (347)
T Consensus 75 ~~~i~V~d~~~al~~la~~~~~~ 97 (452)
T PRK10773 75 LPQLIVKDTRLAFGQLAAWVRQQ 97 (452)
T ss_pred CCEEEECCHHHHHHHHHHHHHHC
T ss_conf 99899899999999999987515