HHsearch alignment for GI: 254780771 and conserved domain: cd05635
>cd05635 LbH_unknown Uncharacterized proteins, Left-handed parallel beta-Helix (LbH) domain: Members in this group are uncharacterized bacterial proteins containing a LbH domain with multiple turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity.
Probab=99.24 E-value=3.8e-12 Score=84.68 Aligned_cols=82 Identities=27% Similarity=0.370 Sum_probs=58.9
Q ss_pred CCCCCCCCEEHHHCCCCCCEEEECCCCCCCCHHCCCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEECCCCCCCCCCCCC
Q ss_conf 23344200001100112320331122100000002332100233220233100244201000002321344543355666
Q gi|254780771|r 129 VKIEDGVVIAPMAVVYPGVEIGRKTYVGPGSVIGAGVRIGRNCSIGAGSSIYSSLIGNSVILHSGVRIGNDGFGYARGVS 208 (347)
Q Consensus 129 a~I~~~v~I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~I~~~iIG~~~~I~~~~vIG~~GFgf~~~~~ 208 (347)
T Consensus 12 V~I~~~~~I~~~~~i~Gp~~IG~~~~I~p~a~Ir~~t~Ig~~~~IG~--Eik~S~i~~~s~~~H~~Y------------- 76 (101)
T cd05635 12 IYIGKDAVIEPFAVIEGPVYIGPGSRVKMGARIYGNTTIGPTCKIGG--EVEDSIIEGYSNKQHDGF------------- 76 (101)
T ss_pred EEECCCCEECCCCEEECCEEECCCCEECCCCEEECCCEECCCCEECC--EEEEEEEECCCCCCCCCE-------------
T ss_conf 99879999999999976669999999999978638879999977614--087618857875687758-------------
Q ss_pred CCCCCCCCCCCEECCCCCCCCCCC
Q ss_conf 531104443200002444454444
Q gi|254780771|r 209 DIHKIVHIGRVIIQDKVEIGANSA 232 (347)
Q Consensus 209 ~~~~~~~~G~v~Ig~~v~IG~n~t 232 (347)
T Consensus 77 -------lGDS~iG~~vNiGAGT~ 93 (101)
T cd05635 77 -------LGHSYLGSWCNLGAGTN 93 (101)
T ss_pred -------EEEEEECCCCEECCCCE
T ss_conf -------76117838757877857