HHsearch alignment for GI: 254780772 and conserved domain: PRK11067
>PRK11067 outer membrane protein assembly factor YaeT; Provisional.
Probab=100.00 E-value=0 Score=1248.33 Aligned_cols=756 Identities=26% Similarity=0.448 Sum_probs=685.0
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEE
Q ss_conf 99999999999999987511465268589996650079889999748789882688999999999996798003899986
Q gi|254780772|r 23 FQMGFIILFYAIFGLSAVYGSNTSIVRRIEIRGATNVGKEVILSRIPVVVGQSISDADLDHAVKNIYAMGYFSNVKIKIV 102 (781)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~I~i~G~~~i~~~~i~~~~~~~~G~~~~~~~i~~~i~~l~~~g~F~~v~~~~~ 102 (781)
T Consensus 1 ~~~k~~~~~~~l~~~~~~~~a~~~~I~~I~v~G~~ri~~~ti~~~l~~~~G~~~~~~~i~~~ik~L~~tg~F~dV~v~~~ 80 (801)
T PRK11067 1 MAMKKLLIASLLFSSATVYGAEGFVVKDIHFEGLQRVAVGAALLSMPVRVGDTVNDEDISNTIRALFATGNFEDVRVLRD 80 (801)
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEE
T ss_conf 97589999999999999875587299799998973769889996469899992798999999999985899524899971
Q ss_pred CCEEEEEEEECCEEEEEEEECCCCCCHHHHHHHH---HHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCC
Q ss_conf 9989999993653657999565436988998873---0057863799999999999999999729700179987643389
Q gi|254780772|r 103 DSVLIIDLIERKIINHLFFSGNNNLKDDQLKMIV---RSRSAAAYDEDTVNADVHNIKQAYASIGYLNVMVKVQHHSISP 179 (781)
Q Consensus 103 ~~~l~~~v~e~p~i~~i~~~Gn~~~~~~~l~~~~---~~~~g~~~~~~~~~~~~~~i~~~y~~~Gy~~a~V~~~~~~~~~ 179 (781)
T Consensus 81 g~~L~~~V~E~P~I~~i~~~Gn~~i~~~~l~~~l~~~~lk~g~~~~~~~l~~~~~~i~~~Y~~~G~~~a~V~~~~~~~~~ 160 (801)
T PRK11067 81 GDTLLVQVKERPTIASITFSGNKAVKDDMLKQNLEASGVRVGEALDRTTLSNIEKGLEDFYYSVGKYSASVKAVVTPLPR 160 (801)
T ss_pred CCEEEEEEEECCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEECCEEEEEEEECCC
T ss_conf 99999999957738999998874378899998775436465754699999999999999999679212199899987899
Q ss_pred CCEEEEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHHCCCC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 842588986036632467787504431101222211100122-1124456664310233334578888887542322100
Q gi|254780772|r 180 TTLNITYVIEEGVKAKINSIRFVGNKNYSHARLERVISIRTS-GYFSFGKTDVYSKERMSFDEEAIRAFYHDRGYAAVKV 258 (781)
Q Consensus 180 ~~v~i~~~I~EG~~~~I~~I~f~Gn~~f~~~~L~~~~~~k~~-~~~~~~~~~~~~~~~l~~D~~~l~~~Y~~~GY~d~~V 258 (781)
T Consensus 161 n~v~l~f~I~EG~~~~I~~I~f~GN~~fs~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~D~~~L~~fY~~~Gy~d~~V 240 (801)
T PRK11067 161 NRVDLKLVFQEGVSAKIQQINIVGNHAFTTDELISRFQLRDEVPWWNVVGDRKYQKQKLAGDLETLRSYYLDRGYARFNI 240 (801)
T ss_pred CEEEEEEEEEECCEEEEEEEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEE
T ss_conf 86999999950888999999998783247899998862376643357616885498999989999999998718662266
Q ss_pred C-CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEECCCCCCHHHHHCCCCCCCCCCCC
Q ss_conf 1-231012455554101220222210000012333444557677775321169962112100000000000023445642
Q gi|254780772|r 259 S-SQVLFDKQKSGYVLIFQIDEGEIYTVGNISIQSTLQEIQKKTLLSLIRIRSGNLYNPQEIKESSEKISKYFFSGERPF 337 (781)
Q Consensus 259 ~-~~~~~~~~~~~~~i~~~I~EG~~y~i~~i~i~g~~~~~~~~~l~~~~~~k~G~~~~~~~~~~~~~~i~~~y~~~GY~f 337 (781)
T Consensus 241 ~~~~v~~~~dk~~~~I~~~I~EG~~Y~~g~i~~~gn~~-~~~~el~~~~~~~~G~~y~~~~i~~~~~~i~~~~~~~GY~f 319 (801)
T PRK11067 241 DSTQVSLTPDKKGIYITVNITEGDQYKLSGVQVSGNLA-GHSAEIEKLTKIEPGELYNGTKVTKMEDDIKKLLGRYGYAY 319 (801)
T ss_pred ECCEEEECCCCCEEEEEEEECCCCEEEEEEEEEECCCC-CCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 04425634776269999998689749872379967777-77899998754578863469999999999999998669721
Q ss_pred CCCCCCCCCCCCCCEEEEEEECCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 01123322343440466554123332201100333343200332100100100000001234445666776510123445
Q gi|254780772|r 338 VRVKTRINRDFAKRIVDIEYLIDQGSPLYVKRIEIEGNDQSYDSVIRRELELSEGDPINYSMIERAKRRIMATGYFSEVN 417 (781)
Q Consensus 338 a~v~~~~~~d~~~~~vdi~~~I~eg~~~~i~~I~I~GN~~T~d~VIrrel~~~~Gd~~~~~~i~~s~~~L~~lg~F~~V~ 417 (781)
T Consensus 320 a~V~~~~~~~~~~~~v~l~~~I~eg~~~yV~~I~I~GN~~T~D~VIRRel~~~eGd~~~~~~i~~S~~rL~~lg~F~~V~ 399 (801)
T PRK11067 320 PRVQTQPEINDADKTVKLRVNVDAGNRFYVRKIRFEGNDTSKDSVLRREMRQMEGAWLGSDLVEQGKERLNRLGFFETVD 399 (801)
T ss_pred CCCCCCEEECCCCCEEEEEEEECCCCEEEEEEEEEECCCCCHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
T ss_conf 00464126747898899999986686279998674277061347510100036765338889999999998558742034
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEECCC
Q ss_conf 33254435654310233221122111111111223321100000111233323442200378741122111134541123
Q gi|254780772|r 418 ISQLPANDVSDYVILRVSVKQLSAGSVGIATNYEVDKGMGVEGHIDDNNFFGQGYRARLAAGFGRHAVQNYTFSVEDPYF 497 (781)
Q Consensus 418 i~~~~~~~~~~~vdl~i~v~E~~tg~~~~g~gys~~~g~~~~~~~~~~Nl~G~G~~l~l~~~~~~~~~~~~~~s~~~P~~ 497 (781)
T Consensus 400 ~~~~~~~~~~~~vdl~~~V~E~~tG~~~~g~Gyss~~g~~~~~~i~~~Nf~G~Gq~l~l~~~~s~~~-~~~~lsftePyf 478 (801)
T PRK11067 400 TDTQRVPGSPDQVDVVYKVKERNTGSFNFGIGYGTESGVSFQAGVQQDNWLGTGNSVGINGTKNDYQ-TYAELSVTDPYF 478 (801)
T ss_pred CCCCCCCCCCCEEEEEEEEEECCCCEEEEEEEEECCCCCEEEEEEEECCCCCCCCEEEEEEEECCCE-EEEEEEECCCCC
T ss_conf 3343589998738999998986788799998886278828999999667576772999999954326-999999625355
Q ss_pred CCCCCCCCCCCCCCCCCC-----CCCCCCCCCCEEEEEEECCCCEEEEECCCEEEEEEECCCCCCCCCHHHH--------
Q ss_conf 577754310011113333-----3343233320245542025430235404125776401467544201112--------
Q gi|254780772|r 498 LGSPISAGFDLQKTHLED-----GSLDINDESAAVRMIVPITESISTSFKYDLRFLQYGAISEKEKIPSIYT-------- 564 (781)
Q Consensus 498 ~~~~~s~~~~~~~~~~~~-----~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 564 (781)
T Consensus 479 ~~~~~s~g~~~f~~~~~~~~~~~~~Y~~~~~G~~~~~g~pi~e~~~~~~g~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~ 558 (801)
T PRK11067 479 TVDGVSLGGRIFYNDFEADDADLSDYTNKSYGTDVTLGFPINEYNSLRAGLGYVHNKLSNMQPQVAMWRYLESMGENPST 558 (801)
T ss_pred CCCCCEEEEEEEEEECCCCCCCCCCCEEEEEEEEEEEEEECCCCEEEEEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCC
T ss_conf 77885247888876613566553331358972688997761442589999889998634566203234454313656443
Q ss_pred HHHCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEEEEEEEEECCCEEEE--EEEEEEEEE
Q ss_conf 210158502467884321554201100246515654202456555420366663004799935880999--999997898
Q gi|254780772|r 565 TLIEHGKFSSHSISQSIIYNTLDNPIVPRKGMLISSSYDYAGFGGDSQYHRIGSRASYFYLLSDDSDIV--GSLRFGYGC 642 (781)
Q Consensus 565 ~~~~~~~~~~~~i~~~l~~dtrD~~~~Pt~G~~~~~~~~~a~~g~d~~f~k~~~~~~~y~~l~~~~~l~--~~~~~g~~~ 642 (781)
T Consensus 559 ~~~~~~~~~~~~~~~~~t~dt~d~~~~Pt~G~~~~ls~~~a~~Ggd~~f~K~~~~~~~Y~pl~~~~~~vl~~~~~~G~~~ 638 (801)
T PRK11067 559 SDQDSFKTDDFTFNYGWTYNNLDRGYFPTAGNRVNLTGKVTIPGSDNEYYKVTLDTATYVPLDDDHKWVLLGRGRLGYGD 638 (801)
T ss_pred CCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEEEEEEEECCCCEEEEEEEEEEEEEE
T ss_conf 23565034226899988996687773899875699886844567785279999999999991579559999999998740
Q ss_pred EECCCCCCCCHHEEEECCCCCCCCCCCCCCCCC-----------------CCCCCCCCCEEEEEEEEEEEEECCCCCCC-
Q ss_conf 516997412301275078971402126861550-----------------37997222147899999999614565654-
Q gi|254780772|r 643 VIPSNKNLQLFDQFSVSSNYYLRGFAYKGIGPR-----------------VDKKYAIGGKIYSSASAAVSFPMPLVPER- 704 (781)
Q Consensus 643 ~~~~~~~lp~~erF~lGG~~svRGy~~~~iGP~-----------------~~~~~~~GG~~~~~~s~E~r~pl~~~~~~- 704 (781)
T Consensus 639 ~~g-~~~vP~~erFylGG~~svRGf~~~~iGPr~~~~~~~~~~~~~~~~~~~~~d~iGG~~~~~~~~El~fP~p~~~~~~ 717 (801)
T PRK11067 639 GLG-GKEMPFYENFYAGGSSTVRGFQSNTIGPKAVYYPGSGSNYDPDGALCKSDDAVGGNAMAVASLELITPTPFISDKY 717 (801)
T ss_pred CCC-CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCHHH
T ss_conf 579-8867710008747988647837899498732356655455654555667776555489999999991378766011
Q ss_pred -CCEEEEEEEEEEEEECCCCCCCCCC----C--CCCCCCEEEEEEEEEEEECCCCCEEEEEEEECCCCCCCEEEEEEEEE
Q ss_conf -5379999997677415666677544----4--56766424799999997557001589988722677876025899964
Q gi|254780772|r 705 -AGLRGAFFVDSATLYANHVALGADK----L--EGNDSFWRVSTGVEIMWNSPLGMMGVYYGIPLRHREGDKIQQFGFRI 777 (781)
Q Consensus 705 -~~l~~~~F~D~G~v~~~~~~~~~~~----~--~~~~~~~r~s~G~Glr~~tP~Gpirld~a~pl~~~~~D~~~~f~Fsi 777 (781)
T Consensus 718 ~~~vr~~~F~D~Gnvw~~~~~~~~~~~~~~~~d~~d~~~lR~S~G~Girw~sPiGPLr~d~a~pl~~~~gD~~~~F~Fsi 797 (801)
T PRK11067 718 ANSVRTSFFWDMGTVWDTNWDSSAYTGASGYPDYSDPSNIRMSAGIALQWMSPLGPLVFSYAQPFKKYDGDKAEQFQFNI 797 (801)
T ss_pred CCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEEECCCCCCCCCEEEEEEEC
T ss_conf 57389999998122366655544544555654668768657999799999877257899998668788997422899957
Q ss_pred EECC
Q ss_conf 1059
Q gi|254780772|r 778 GNRM 781 (781)
Q Consensus 778 G~~f 781 (781)
T Consensus 798 G~~F 801 (801)
T PRK11067 798 GKTW 801 (801)
T ss_pred CCCC
T ss_conf 5769