HHsearch alignment for GI: 254780772 and conserved domain: TIGR02876

>TIGR02876 spore_yqfD sporulation protein YqfD; InterPro: IPR010690 This family consists of several putative bacterial stage IV sporulation (SpoIV) proteins. YqfD of Bacillus subtilis (P54469 from SWISSPROT) is known to be essential for efficient sporulation although its exact function is unknown ..
Probab=97.08  E-value=0.011  Score=34.83  Aligned_cols=103  Identities=17%  Similarity=0.233  Sum_probs=71.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCCCEEEEEEE--EECCCCCCHHHHH---HHCCCCCCCCCCHHH-HH
Q ss_conf             9999999998888999999999-999999875114652685899--9665007988999---974878988268899-99
Q gi|254780772|r   10 RIKRLLEKYFPRSFQMGFIILF-YAIFGLSAVYGSNTSIVRRIE--IRGATNVGKEVIL---SRIPVVVGQSISDAD-LD   82 (781)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~I~--i~G~~~i~~~~i~---~~~~~~~G~~~~~~~-i~   82 (781)
T Consensus        73 G~pF~~~r~~kr~~~~~G~L~f~~~~~~lS~f-------iW~IdvrI~g~~~~~~~~i~~~L~~~G~k~Gv~k~~~Ds~~  145 (406)
T TIGR02876        73 GLPFLIKRLRKRPGILIGILLFLAIVYLLSTF-------IWKIDVRITGVKGETEYEIRKELKEMGIKPGVKKFSIDSVY  145 (406)
T ss_pred             CCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC-------EEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHH
T ss_conf             81478889885500766899999999986175-------58999997279997789999999855875683203688988


Q ss_pred             HHHHHHHH-CCCCCEEEEEEECCEEEEEEEECCEE--EEE
Q ss_conf             99999996-79800389998699899999936536--579
Q gi|254780772|r   83 HAVKNIYA-MGYFSNVKIKIVDSVLIIDLIERKII--NHL  119 (781)
Q Consensus        83 ~~i~~l~~-~g~F~~v~~~~~~~~l~~~v~e~p~i--~~i  119 (781)
T Consensus       146 ~~~~~L~~~~~ei~Wv~v~~~Gt~l~~kvvEk~~~ki~~~  185 (406)
T TIGR02876       146 KLERKLLDRVPEIMWVGVRVRGTKLVIKVVEKQEPKIKEV  185 (406)
T ss_pred             HHHHHHHHCCCCEEEEEEEEECCEEEEEEEECCCCCCCCC
T ss_conf             9999998459948999999853099999982133324456