HHsearch alignment for GI: 254780772 and conserved domain: pfam07244

>pfam07244 Surf_Ag_VNR Surface antigen variable number repeat. This family is found primarily in bacterial surface antigens, normally as variable number repeats at the N-terminus. The C-terminus of these proteins is normally represented by pfam01103. The alignment centres on a -GY- or -GF- motif. Some members of this family are found in the mitochondria. It is predicted to have a mixed alpha/beta secondary structure.
Probab=99.09  E-value=7.6e-10  Score=81.73  Aligned_cols=77  Identities=23%  Similarity=0.487  Sum_probs=69.7

Q ss_pred             CEEEEEEEECCCC-CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCEEEEEEEECC
Q ss_conf             5365799956543-69889988730057863799999999999999999729700179987643389842588986036
Q gi|254780772|r  114 KIINHLFFSGNNN-LKDDQLKMIVRSRSAAAYDEDTVNADVHNIKQAYASIGYLNVMVKVQHHSISPTTLNITYVIEEG  191 (781)
Q Consensus       114 p~i~~i~~~Gn~~-~~~~~l~~~~~~~~g~~~~~~~~~~~~~~i~~~y~~~Gy~~a~V~~~~~~~~~~~v~i~~~I~EG  191 (781)
T Consensus         1 ~~i~~I~~~Gn~~~~~~~~l~~~~~~~~G~~~~~~~i~~~~~~l~~~y~~~Gy~~~~V~~~~~~~-~~~v~l~~~V~Eg   78 (78)
T pfam07244         1 YKIKDINIEGNLKRTKDEVLRRELKLKEGDVFNREKLEEDIERLYDYYGALGYAFADVKVEPEPD-PKTVDLTFNVDEG   78 (78)
T ss_pred             CEEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECC-CCEEEEEEEEECC
T ss_conf             97979999948866899999998635887631699999799999999986797654433177138-9989999998269