HHsearch alignment of GI: 254780772 and MMDB domain: 2qdz_A_46-209
>2qdz_A (A:46-209) TPSB transporter FHAC; beta barrel, potra domain, membrane, protein transport; 3.15A {Bordetella pertussis}
Probab=99.79 E-value=9.6e-20 Score=146.10 Aligned_cols=162 Identities=12% Similarity=0.016 Sum_probs=136.5
Q ss_pred EEEEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 25889860366324677875044311012222111001221124456664310233334578888887542322100123
Q gi|254780772|r 182 LNITYVIEEGVKAKINSIRFVGNKNYSHARLERVISIRTSGYFSFGKTDVYSKERMSFDEEAIRAFYHDRGYAAVKVSSQ 261 (781)
Q Consensus 182 v~i~~~I~EG~~~~I~~I~f~Gn~~f~~~~L~~~~~~k~~~~~~~~~~~~~~~~~l~~D~~~l~~~Y~~~GY~d~~V~~~ 261 (781)
|+|+|+|+||+++.|++|.|+||+.+++.+|.+.+..++. +.|+.+.++.+.++|+++|+++||++++|..+
T Consensus 2 v~i~~~i~eg~~~~i~~i~i~G~~~~~~~~l~~~~~~~~g--------~~~~~~~l~~~~~~i~~~y~~~Gy~~a~v~~~ 73 (164)
T 2qdz_A 2 PARKPDATSGHTVTVHAVDLDFGVEGRLFDPAPLVQDYLN--------RPLDNEQLFLLVKALSAALYDRGYATSIVTFV 73 (164)
T ss_dssp ------CBCCCSSSSCCEEEECCSSSCCCSCSTTSTTSSS--------SCBCSTTHHHHHHHHHHHHHHTTCTTCEEEEE
T ss_pred CCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHCC--------CCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEC
T ss_conf 7644568988539999999958865898999987675069--------80589999999999999999789845797722
Q ss_pred CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEECCCCCCHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 10124555541012202222100000123334445576777753211699621121000000000000234456420112
Q gi|254780772|r 262 VLFDKQKSGYVLIFQIDEGEIYTVGNISIQSTLQEIQKKTLLSLIRIRSGNLYNPQEIKESSEKISKYFFSGERPFVRVK 341 (781)
Q Consensus 262 ~~~~~~~~~~~i~~~I~EG~~y~i~~i~i~g~~~~~~~~~l~~~~~~k~G~~~~~~~~~~~~~~i~~~y~~~GY~fa~v~ 341 (781)
- .+...+.+++.|.||++++++.+.+.|+ ..++++.+.+.+++++|++|+...++++.++|... || |..+.
T Consensus 74 ~---~~~~~~~v~~~v~eG~~~~i~~i~~~g~-~~~~~~~l~~~~~~~~g~~~~~~~l~~~~~~l~~~----g~-f~~v~ 144 (164)
T 2qdz_A 74 P---PGVVDGVLKLKVEWGRIKGWLIDGKPLE-GTRDRMMVFSAMPGWQDKVLNVFDIDQAIYNINNG----GK-TGNIT 144 (164)
T ss_dssp E---EEEETTEEEEEEECCEEEEEEETTEECC-SHHHHHHHHHHSTTCTTCBCCHHHHHHHHHHHCSS----SE-EEEEE
T ss_pred C---CCCCCCEEEEEEEEEEEEEEEEEECCCC-CCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC----CC-CEEEE
T ss_conf 5---6666647999999966766999742676-62266667765666778845767899999986474----76-31699
Q ss_pred CCCCCCCCCCEEEEEEECCCC
Q ss_conf 332234344046655412333
Q gi|254780772|r 342 TRINRDFAKRIVDIEYLIDQG 362 (781)
Q Consensus 342 ~~~~~d~~~~~vdi~~~I~eg 362 (781)
+.....++.++|.+.|.|+
T Consensus 145 --i~~~~~~~~~~i~~~v~Er 163 (164)
T 2qdz_A 145 --IVPADEYGYSYLDLQLQRR 163 (164)
T ss_dssp --EEECSSTTEEEEEEEEEEC
T ss_pred --EECCCCCCCCCCEEEEEEC
T ss_conf --8518878863210223541