HHsearch results for GI: 254780772 and protein with PDBid: 2qdf_A
>2qdf_A OMP85, outer membrane protein assembly factor YAET; potra domain, protein transport; 2.20A {Escherichia coli K12} PDB: 2qcz_A 2v9h_A
Probab=100.00 E-value=9.4e-39 Score=269.49 Aligned_cols=312 Identities=18% Similarity=0.266 Sum_probs=255.9
Q ss_pred EECCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC-EEEEEEEEEECCCCCEEEEEEEE
Q ss_conf 93653657999565436988998873005786379999999999999999972970-01799876433898425889860
Q gi|254780772|r 111 IERKIINHLFFSGNNNLKDDQLKMIVRSRSAAAYDEDTVNADVHNIKQAYASIGYL-NVMVKVQHHSISPTTLNITYVIE 189 (781)
Q Consensus 111 ~e~p~i~~i~~~Gn~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~i~~~y~~~Gy~-~a~V~~~~~~~~~~~v~i~~~I~ 189 (781)
-|..+|.+|.|+||+.++++.+...+++++|+++++..+++++++| |. .||| +++|.. . + ..|++.|.
T Consensus 5 a~~~~I~~I~i~G~~~v~~~~i~~~~~~~~G~~~~~~~i~~~ik~L---~~-tg~F~dV~v~~--~----g-~~l~i~v~ 73 (335)
T 2qdf_A 5 AEGFVVKDIHFEGLQRVAVGAALLSMPVRTGDTVNDEDISNTIRAL---FA-TGNFEDVRVLR--D----G-DTLLVQVK 73 (335)
T ss_dssp CCCEECCEEEEESCSSSCHHHHHHTSSCCTTCEECHHHHHHHHHHH---HT-TSCEEEEEEEE--E----T-TEEEEEEE
T ss_pred CCCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHH---HH-CCCCCEEEEEE--C----C-CEEEEEEE
T ss_conf 6774897999999832799999974689999927999999999999---97-69942489997--2----8-88999888
Q ss_pred CCCCEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 36632467787504431101222211100122112445666431023333457888888754232210012310124555
Q gi|254780772|r 190 EGVKAKINSIRFVGNKNYSHARLERVISIRTSGYFSFGKTDVYSKERMSFDEEAIRAFYHDRGYAAVKVSSQVLFDKQKS 269 (781)
Q Consensus 190 EG~~~~I~~I~f~Gn~~f~~~~L~~~~~~k~~~~~~~~~~~~~~~~~l~~D~~~l~~~Y~~~GY~d~~V~~~~~~~~~~~ 269 (781)
|-| .|.+|.|+||+.+++.+|++.+.... ...+..|++..+..+.++|+++|+.+||+++.|..... ..+..
T Consensus 74 e~p--~i~~i~~~Gn~~~~~~~l~~~~~~~~-----~~~g~~~~~~~~~~~~~~i~~~Y~~~Gy~~a~V~~~~~-~~~~~ 145 (335)
T 2qdf_A 74 ERP--TIASITFSGNKSVKDDMLKQNLEASG-----VRVGESLDRTTIADIEKGLEDFYYSVGKYSASVKAVVT-PLPRN 145 (335)
T ss_dssp ECC--EEEEEEEESCCSSCHHHHHHHHHTTT-----CCTTSBCCTTSHHHHHHHHHHHGGGGTBSSCEEEEEEE-EETTT
T ss_pred ECC--CCCCCEEECCCCCCHHHHHHHHHHHC-----CCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEEEEE-ECCCC
T ss_conf 645--31111266444233355545443202-----23456554345688999999999863725678877777-65777
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC---------CCCEECCCCCCHHHHHCCCCCCCCCCCCCCC
Q ss_conf 5410122022221000001233344455767777532116---------9962112100000000000023445642011
Q gi|254780772|r 270 GYVLIFQIDEGEIYTVGNISIQSTLQEIQKKTLLSLIRIR---------SGNLYNPQEIKESSEKISKYFFSGERPFVRV 340 (781)
Q Consensus 270 ~~~i~~~I~EG~~y~i~~i~i~g~~~~~~~~~l~~~~~~k---------~G~~~~~~~~~~~~~~i~~~y~~~GY~fa~v 340 (781)
.+.|++.|+||+++++.+|.|.|+. .++...|.+.+..+ .+..|+...++.+.++|.++|.++||..++|
T Consensus 146 ~~~v~~~I~EG~~~~I~~I~f~Gn~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~l~~~y~~~Gy~d~~v 224 (335)
T 2qdf_A 146 RVDLKLVFQEGVSAEIQQINIVGNH-AFTTDELISHFQLRDEVPWWNVVGDRKYQKQKLAGDLETLRSYYLDRGYARFNI 224 (335)
T ss_dssp EEEEEEEEECCCBCEEEEEEEESCC-SSCHHHHHGGGSCC--------------CCSCHHHHHHHHHHHHHTTTCTTCEE
T ss_pred CCCEEEEEECCCCEEEEEEEECCCC-CCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEC
T ss_conf 6313688512654179997631665-430456554333101221222234542005677777877667774301011101
Q ss_pred C-CCCCCCCCCCEEEEEEECCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHH----HC-CC
Q ss_conf 2-332234344046655412333220110033334320033210010010000000123444566677651----01-23
Q gi|254780772|r 341 K-TRINRDFAKRIVDIEYLIDQGSPLYVKRIEIEGNDQSYDSVIRRELELSEGDPINYSMIERAKRRIMAT----GY-FS 414 (781)
Q Consensus 341 ~-~~~~~d~~~~~vdi~~~I~eg~~~~i~~I~I~GN~~T~d~VIrrel~~~~Gd~~~~~~i~~s~~~L~~l----g~-F~ 414 (781)
. +....+.+...++|++.|+||+++++++|.|.||....+..+++.+.++||++||..++.+++++|.++ || |.
T Consensus 225 ~~~~~~~~~d~~~~~i~~~i~EG~~y~v~~i~i~Gn~~~~~~~l~~~~~~k~G~~y~~~~i~~~~~~i~~~y~~~GY~~~ 304 (335)
T 2qdf_A 225 DSTQVSLTPDKKGIYVTVNITEGDQYKLSGVEVSGNLAGHSAEIEQLTKIEPGELYNGTKVTKMEDDIKKLLGRYGYAYP 304 (335)
T ss_dssp EEEEEEECTTSSEEEEEEEEECCCCCEEEEEEEEEECTTCHHHHHHHTCCCTTEECCHHHHHHHHHHHHHHHHTTTBSSC
T ss_pred CCCEEEEECCCCCEEEEEEECCCCEEEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 33168885066440588731368459985118972443314679987457899950999999999999999986798414
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 44533254435654310233221122111
Q gi|254780772|r 415 EVNISQLPANDVSDYVILRVSVKQLSAGS 443 (781)
Q Consensus 415 ~V~i~~~~~~~~~~~vdl~i~v~E~~tg~ 443 (781)
.|...+.+. ...+.|||.+.+.|.+.-.
T Consensus 305 ~V~~~~~~~-~~~~~vdv~~~I~eg~~~~ 332 (335)
T 2qdf_A 305 RVQSMPEIN-DADKTVKLRVNVDAGNRFY 332 (335)
T ss_dssp EEEEEEEEE-TTTTEEEEEEEEECCCBCC
T ss_pred EEEEEEEEC-CCCCEEEEEEEEEECCCEE
T ss_conf 899777884-8899898999997289558