RPSBLAST alignment for GI: 254780772 and conserved domain: pfam07244

>gnl|CDD|148699 pfam07244, Surf_Ag_VNR, Surface antigen variable number repeat. This family is found primarily in bacterial surface antigens, normally as variable number repeats at the N-terminus. The C-terminus of these proteins is normally represented by pfam01103. The alignment centres on a -GY- or -GF- motif. Some members of this family are found in the mitochondria. It is predicted to have a mixed alpha/beta secondary structure. Length = 78

 Score = 51.5 bits (124), Expect = 8e-07
 Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 11/88 (12%)

Query: 194 AKINSIRFVGN-KNYSHARLERVISIRTSGYFSFGKTDVYSKERMSFDEEAIRAFYHDRG 252
            KI  I   GN K      L R + ++          DV+++E++  D E +  +Y   G
Sbjct: 1   YKIKDINIEGNLKRTKDEVLRRELKLKEG--------DVFNREKLEEDIERLYDYYGALG 52

Query: 253 YAAVKVSSQVLFDKQKSGYVLIFQIDEG 280
           YA   V  +   +       L F +DEG
Sbjct: 53  YAFADVKVEP--EPDPKTVDLTFNVDEG 78