RPSBLAST alignment for GI: 254780772 and conserved domain: pfam07244

>gnl|CDD|148699 pfam07244, Surf_Ag_VNR, Surface antigen variable number repeat. This family is found primarily in bacterial surface antigens, normally as variable number repeats at the N-terminus. The C-terminus of these proteins is normally represented by pfam01103. The alignment centres on a -GY- or -GF- motif. Some members of this family are found in the mitochondria. It is predicted to have a mixed alpha/beta secondary structure. Length = 78

 Score = 46.9 bits (112), Expect = 2e-05
 Identities = 18/80 (22%), Positives = 45/80 (56%), Gaps = 2/80 (2%)

Query: 283 YTVGNISIQSTLQEIQKKTLLSLIRIRSGNLYNPQEIKESSEKISKYFFSGERPFVRVKT 342
           Y + +I+I+  L+  + + L   ++++ G+++N ++++E  E++  Y+ +    F  VK 
Sbjct: 1   YKIKDINIEGNLKRTKDEVLRRELKLKEGDVFNREKLEEDIERLYDYYGALGYAFADVKV 60

Query: 343 RINRDFAKRIVDIEYLIDQG 362
               D   + VD+ + +D+G
Sbjct: 61  EPEPD--PKTVDLTFNVDEG 78