HHsearch alignment for GI: 254780773 and conserved domain: COG0265

>COG0265 DegQ Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain [Posttranslational modification, protein turnover, chaperones].

Probab=98.22  E-value=2e-06  Score=64.06  Aligned_cols=66  Identities=36%  Similarity=0.497  Sum_probs=57.0

Q ss_pred             CCCCCCCCCCHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCC-CCCCCCEEEEEECCCCEEEECCCC
Q ss_conf             2000245675565300145662888878304540011111014-678863169996587313101121
Q gi|254780773|r  120 PVVSNVSPASPAAIAGVKKGDCIISLDGITVSAFEEVAPYVRE-NPLHEISLVLYREHVGVLHLKVMP  186 (349)
Q Consensus       120 p~I~~V~~~spA~~AGL~~GD~Il~InG~~V~s~~dl~~~i~~-~~g~~v~i~v~R~~~~~~~~~v~p  186 (349)
T Consensus       272 ~~V~~v~~~spa~~agi~~Gdii~~~ng~~v~~~~~l~~~v~~~~~g~~v~~~~~r~g~-~~~~~v~l  338 (347)
T COG0265         272 AVVLGVLPGSPAAKAGIKAGDIITAVNGKPVASLSDLVAAVASNRPGDEVALKLLRGGK-ERELAVTL  338 (347)
T ss_pred             CEEEEECCCCHHHHCCCCCCCEEEEECCEECCCHHHHHHHHHCCCCCCEEEEEEEECCE-EEEEEEEC
T ss_conf             68865179985787378778779978998855788888887326999768899997883-57776861