HHsearch alignment for GI: 254780773 and conserved domain: COG1994
>COG1994 SpoIVFB Zn-dependent proteases [General function prediction only].
Probab=98.42 E-value=1.2e-06 Score=65.57 Aligned_cols=44 Identities=39% Similarity=0.686 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 03478999999999999963064722436999999988827869
Q gi|254780773|r 273 FNAYIAFLAMFSWAIGFMNLLPIPILDGGHLITFLLEMIRGKSL 316 (349)
Q Consensus 273 ~~~~l~~~a~isi~Lg~~NlLPip~LDGG~i~~~~~E~i~gr~i 316 (349)
T Consensus 136 ~~~~~~~la~~Nl~L~lFNLiPi~PLDGg~vlr~~~~~~~~~~~ 179 (230)
T COG1994 136 LFAFLAALALVNLVLALFNLLPIPPLDGGRVLRALLPRRYGAAI 179 (230)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999973778876589999986389999999