HHsearch results for GI: 254780773 and protein with PDBid: 1kwa_A

>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1

Probab=98.15  E-value=1.1e-06  Score=64.45  Aligned_cols=57  Identities=21%  Similarity=0.327  Sum_probs=46.7

Q ss_pred             CCCCCCCCCCCHHHHHH-CCCCCEEEEECCCCCCC--CHHHHHHCCCCCCCCCEEEEEECC
Q ss_conf             32000245675565300-14566288887830454--001111101467886316999658
Q gi|254780773|r  119 KPVVSNVSPASPAAIAG-VKKGDCIISLDGITVSA--FEEVAPYVRENPLHEISLVLYREH  176 (349)
Q Consensus       119 ~p~I~~V~~~spA~~AG-L~~GD~Il~InG~~V~s--~~dl~~~i~~~~g~~v~i~v~R~~  176 (349)
                      ..+|.+|.++|||+++| |++||+|++|||+++.+  .+++.+.++..+ .++++++....
T Consensus        26 ~~~I~~v~~gg~A~~~G~l~~GD~Il~INg~~v~~~~~~ev~~ll~~~~-~~v~L~v~ps~   85 (88)
T 1kwa_A           26 HCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMR-GSITFKIVPSY   85 (88)
T ss_dssp             GEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHHCC-EEEEEEEECCC
T ss_pred             CEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCC-CCEEEEEEECC
T ss_conf             8999997899979983999889999999999977998999999997699-96999998477