HHsearch results for GI: 254780773 and protein with PDBid: 1m5z_A

>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1

Probab=98.40  E-value=2e-07  Score=69.48  Aligned_cols=56  Identities=27%  Similarity=0.526  Sum_probs=48.1

Q ss_pred             CCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCCCCH--HHHHHCCCCCCCCCEEEEEEC
Q ss_conf             320002456755653001456628888783045400--111110146788631699965
Q gi|254780773|r  119 KPVVSNVSPASPAAIAGVKKGDCIISLDGITVSAFE--EVAPYVRENPLHEISLVLYRE  175 (349)
Q Consensus       119 ~p~I~~V~~~spA~~AGL~~GD~Il~InG~~V~s~~--dl~~~i~~~~g~~v~i~v~R~  175 (349)
                      ...|.+|.++|||+++||++||+|++|||+++.++.  +....+++. ++++++++.|+
T Consensus        33 gv~V~~V~~g~~A~~~GL~~GD~Il~INg~~v~~~~~~~~~~~l~~~-~~~v~l~V~R~   90 (91)
T 1m5z_A           33 GVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCLVVPLIAES-GNKLDLVISRN   90 (91)
T ss_dssp             CEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTS-TTEEEEEEEEC
T ss_pred             CEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHCC-CCEEEEEEEEC
T ss_conf             99999988999455271639999999999998999999999998769-99899999979