HHsearch results for GI: 254780773 and protein with PDBid: 1n7t_A

>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A

Probab=97.93  E-value=4.6e-06  Score=60.07  Aligned_cols=54  Identities=24%  Similarity=0.447  Sum_probs=46.3

Q ss_pred             CCCCCCCCCHHHHHHCCCCCEEEEECCCCCCCC--HHHHHHCCCCCCCCCEEEEEECC
Q ss_conf             000245675565300145662888878304540--01111101467886316999658
Q gi|254780773|r  121 VVSNVSPASPAAIAGVKKGDCIISLDGITVSAF--EEVAPYVRENPLHEISLVLYREH  176 (349)
Q Consensus       121 ~I~~V~~~spA~~AGL~~GD~Il~InG~~V~s~--~dl~~~i~~~~g~~v~i~v~R~~  176 (349)
                      +|..|.|+|||+.+ |++||+|++|||+++.++  +|..+.+++. ++++++++.|+-
T Consensus        46 ~V~~V~~gg~A~~~-L~~GD~Il~VNg~~v~~~~~~eav~~l~~~-~~~v~L~V~R~~  101 (103)
T 1n7t_A           46 FVTRVQPEGPASKL-LQPGDKIIQANGYSFINIEHGQAVSLLKTF-QNTVELIIVREV  101 (103)
T ss_dssp             ECCCBSSSSTTSSS-CCTTCEEEEETTEECSSCCHHHHHHHHHHC-CSEEEEEEECCC
T ss_pred             EEEEECCCCHHHHC-CCCCCEEEEECCEECCCCCHHHHHHHHHCC-CCEEEEEEEEEC
T ss_conf             99997899946716-689999999999998899799999999728-997999999966