HHsearch results for GI: 254780773 and protein with PDBid: 1u3b_A

>1u3b_A Amyloid beta A4 precursor protein-binding, family A, member 1; X11S/mints, PDZ domain, scaffold protein, protein trafficking, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 2yt8_A
Probab=97.93  E-value=9.9e-06  Score=57.75  Aligned_cols=59  Identities=20%  Similarity=0.304  Sum_probs=50.8

Q ss_pred             CCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCCCC--HHHHHHCCCCCCCCCEEEEEECCC
Q ss_conf             332000245675565300145662888878304540--011111014678863169996587
Q gi|254780773|r  118 MKPVVSNVSPASPAAIAGVKKGDCIISLDGITVSAF--EEVAPYVRENPLHEISLVLYREHV  177 (349)
Q Consensus       118 ~~p~I~~V~~~spA~~AGL~~GD~Il~InG~~V~s~--~dl~~~i~~~~g~~v~i~v~R~~~  177 (349)
                      ..+.+..+.++|||+.+||++||+|++|||+++.++  +++.+.+++++ .++++++.+...
T Consensus       112 ~~~~v~~v~~g~~A~~~gL~~GD~Il~VNG~~v~~~s~~e~~~ll~~~~-~~v~l~V~p~~~  172 (185)
T 1u3b_A          112 QNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATPHEKIVHILSNAV-GEIHMKTMPAAM  172 (185)
T ss_dssp             ETTEEEEECTTSHHHHHTCCTTEEEEEETTEECTTSCHHHHHHHHHTCC-EEEEEEEEECSC
T ss_pred             CCCEEEEEECCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHHCC-CEEEEEEEECCH
T ss_conf             5965996525885765789989999999998998999999999998199-959999950614