HHsearch results for GI: 254780773 and protein with PDBid: 1um1_A

>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1

Probab=98.20  E-value=1.1e-06  Score=64.42  Aligned_cols=57  Identities=21%  Similarity=0.450  Sum_probs=49.0

Q ss_pred             CCCCCCCCCHHHHHH-CCCCCEEEEECCCCCCC--CHHHHHHCCCCCCCCCEEEEEECCCC
Q ss_conf             000245675565300-14566288887830454--00111110146788631699965873
Q gi|254780773|r  121 VVSNVSPASPAAIAG-VKKGDCIISLDGITVSA--FEEVAPYVRENPLHEISLVLYREHVG  178 (349)
Q Consensus       121 ~I~~V~~~spA~~AG-L~~GD~Il~InG~~V~s--~~dl~~~i~~~~g~~v~i~v~R~~~~  178 (349)
                      +|..|.++|||+++| |++||+|++|||+++.+  .+|..+.++.. ++++.+++.|.+.+
T Consensus        39 ~I~~v~~gg~A~~~g~L~~GD~Il~INg~~v~~~~~~ev~~~lk~~-~~~v~l~v~r~~~~   98 (110)
T 1um1_A           39 YIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRHG-GKKMRFLVAKSDVE   98 (110)
T ss_dssp             EEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHTC-CSEEEEEEECCCHH
T ss_pred             EEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCC-CCEEEEEEEECCCC
T ss_conf             9999899997998199999999999999997899899999999829-99699999939987