HHsearch results for GI: 254780773 and protein with PDBid: 1v5l_A
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.31 E-value=3.9e-07 Score=67.46 Aligned_cols=59 Identities=22% Similarity=0.415 Sum_probs=50.1
Q ss_pred CCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCCCC--HHHHHHCCCCCCCCCEEEEEECCCC
Q ss_conf 32000245675565300145662888878304540--0111110146788631699965873
Q gi|254780773|r 119 KPVVSNVSPASPAAIAGVKKGDCIISLDGITVSAF--EEVAPYVRENPLHEISLVLYREHVG 178 (349)
Q Consensus 119 ~p~I~~V~~~spA~~AGL~~GD~Il~InG~~V~s~--~dl~~~i~~~~g~~v~i~v~R~~~~ 178 (349)
..+|..|.+++||+.+||++||+|++|||+++.++ +|..+.+++. ++.+++++.|.+..
T Consensus 30 ~i~V~~v~~gs~A~~~gL~~GD~Il~VNg~~v~~~s~~eav~~l~~~-~~~v~L~v~R~~~~ 90 (103)
T 1v5l_A 30 PLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAA-SYQLCLKIDRAETR 90 (103)
T ss_dssp EEECSCBCTTSTTGGGTCCTTCBEEEETTEECSSCCHHHHHHHHTTC-CSEEECEECCCTTT
T ss_pred CEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHCC-CCEEEEEEEECCCC
T ss_conf 96998978989789769999999999999985899899999998769-99799999989954