HHsearch results for GI: 254780773 and protein with PDBid: 1v5l_A

>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.31  E-value=3.9e-07  Score=67.46  Aligned_cols=59  Identities=22%  Similarity=0.415  Sum_probs=50.1

Q ss_pred             CCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCCCC--HHHHHHCCCCCCCCCEEEEEECCCC
Q ss_conf             32000245675565300145662888878304540--0111110146788631699965873
Q gi|254780773|r  119 KPVVSNVSPASPAAIAGVKKGDCIISLDGITVSAF--EEVAPYVRENPLHEISLVLYREHVG  178 (349)
Q Consensus       119 ~p~I~~V~~~spA~~AGL~~GD~Il~InG~~V~s~--~dl~~~i~~~~g~~v~i~v~R~~~~  178 (349)
                      ..+|..|.+++||+.+||++||+|++|||+++.++  +|..+.+++. ++.+++++.|.+..
T Consensus        30 ~i~V~~v~~gs~A~~~gL~~GD~Il~VNg~~v~~~s~~eav~~l~~~-~~~v~L~v~R~~~~   90 (103)
T 1v5l_A           30 PLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAA-SYQLCLKIDRAETR   90 (103)
T ss_dssp             EEECSCBCTTSTTGGGTCCTTCBEEEETTEECSSCCHHHHHHHHTTC-CSEEECEECCCTTT
T ss_pred             CEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHCC-CCEEEEEEEECCCC
T ss_conf             96998978989789769999999999999985899899999998769-99799999989954