HHsearch results for GI: 254780773 and protein with PDBid: 1v5q_A

>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.94  E-value=5.5e-06  Score=59.50  Aligned_cols=55  Identities=27%  Similarity=0.525  Sum_probs=44.7

Q ss_pred             CCCCCCCCCCCHHHHHH-CCCCCEEEEECCCCCCC--CHHHHHHCCCCCCCCCEEEEEE
Q ss_conf             32000245675565300-14566288887830454--0011111014678863169996
Q gi|254780773|r  119 KPVVSNVSPASPAAIAG-VKKGDCIISLDGITVSA--FEEVAPYVRENPLHEISLVLYR  174 (349)
Q Consensus       119 ~p~I~~V~~~spA~~AG-L~~GD~Il~InG~~V~s--~~dl~~~i~~~~g~~v~i~v~R  174 (349)
                      ..+|..|.|+|||+++| |++||+|++|||+++.+  .+|+.+.+++.+ +...+++.+
T Consensus        46 ~i~V~~i~~gg~A~~~G~L~~GD~Il~INg~~v~~~~~~e~~~~l~~~~-~~~~l~l~~  103 (122)
T 1v5q_A           46 PPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSS-ITSKVTLEI  103 (122)
T ss_dssp             CCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHHHHT-TTTCEEEEE
T ss_pred             CEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHCC-CCEEEEEEE
T ss_conf             9499998999979970998789999999999999997999999998189-950899999