HHsearch results for GI: 254780773 and protein with PDBid: 1v62_A

>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1

Probab=98.06  E-value=2.4e-06  Score=62.00  Aligned_cols=59  Identities=20%  Similarity=0.359  Sum_probs=49.5

Q ss_pred             CCCCCCCCCCCHHHHHH-CCCCCEEEEECCCCCC--CCHHHHHHCCCCCCCCCEEEEEECCCC
Q ss_conf             32000245675565300-1456628888783045--400111110146788631699965873
Q gi|254780773|r  119 KPVVSNVSPASPAAIAG-VKKGDCIISLDGITVS--AFEEVAPYVRENPLHEISLVLYREHVG  178 (349)
Q Consensus       119 ~p~I~~V~~~spA~~AG-L~~GD~Il~InG~~V~--s~~dl~~~i~~~~g~~v~i~v~R~~~~  178 (349)
                      ..+|..|.++|||+++| |++||+|++|||+++.  +.+++.+.+++.+ +++++++.|....
T Consensus        43 ~i~V~~V~~~s~A~~~g~L~~GD~Il~INg~~v~~~~~~ev~~ll~~~~-~~v~l~v~~~~~~  104 (117)
T 1v62_A           43 VITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLASIS-EKVRLEILPVPQS  104 (117)
T ss_dssp             EEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHHSCS-SEEEEEECCBTTB
T ss_pred             CEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCC-CCEEEEEEECCCC
T ss_conf             8899998889989984999728899999999988998999999998399-9489999969977