HHsearch results for GI: 254780773 and protein with PDBid: 1va8_A

>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.99  E-value=3.4e-06  Score=60.97  Aligned_cols=57  Identities=19%  Similarity=0.408  Sum_probs=48.4

Q ss_pred             CCCCCCCCCCCHHHHHH-CCCCCEEEEECCCCCCCCH--HHHHHCCCCCCCCCEEEEEECC
Q ss_conf             32000245675565300-1456628888783045400--1111101467886316999658
Q gi|254780773|r  119 KPVVSNVSPASPAAIAG-VKKGDCIISLDGITVSAFE--EVAPYVRENPLHEISLVLYREH  176 (349)
Q Consensus       119 ~p~I~~V~~~spA~~AG-L~~GD~Il~InG~~V~s~~--dl~~~i~~~~g~~v~i~v~R~~  176 (349)
                      ..+|..|.++|||+.+| |++||+|++|||+++..+.  ++.+.++..+ .++++++.+..
T Consensus        49 ~i~V~~v~~gg~A~~~g~l~~GD~Il~Ing~~v~~~~~~~v~~ll~~~~-~~v~l~v~~~~  108 (113)
T 1va8_A           49 SVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMH-GTLTFVLIPSS  108 (113)
T ss_dssp             SEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC-EEEEEEEECCC
T ss_pred             CEEEEEECCCCHHHHCCCCCCCCEEEEECCCEECCCCHHHHHHHHHCCC-CCEEEEEEECC
T ss_conf             8999997899979981899749999999991777996999999985699-92999998799