HHsearch results for GI: 254780773 and protein with PDBid: 1whd_A

>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1

Probab=98.46  E-value=1.7e-07  Score=69.87  Aligned_cols=61  Identities=26%  Similarity=0.331  Sum_probs=51.4

Q ss_pred             CCCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCCCCH--HHHHHCCCCCCCCCEEEEEECCC
Q ss_conf             333320002456755653001456628888783045400--11111014678863169996587
Q gi|254780773|r  116 GVMKPVVSNVSPASPAAIAGVKKGDCIISLDGITVSAFE--EVAPYVRENPLHEISLVLYREHV  177 (349)
Q Consensus       116 g~~~p~I~~V~~~spA~~AGL~~GD~Il~InG~~V~s~~--dl~~~i~~~~g~~v~i~v~R~~~  177 (349)
                      +....+|..|.++|||++|||++||+|++|||+++.++.  ++.+.++.. +.++.+++.|...
T Consensus        34 ~~~~~~V~~V~~~s~A~~aGL~~GD~Il~INg~~v~~~~~~ev~~~l~~~-~~~v~l~v~R~~~   96 (100)
T 1whd_A           34 CDSPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRSC-PSEIILLVWRVSG   96 (100)
T ss_dssp             CSSSCBCCBCCTTSHHHHHTCCSSCEEEEETTEECTTCCHHHHHHHHHHC-SSEEEEEEEECCS
T ss_pred             CCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHCC-CCEEEEEEEECCC
T ss_conf             89998999978999278679999999999999999999999999997679-9979999998998