HHsearch results for GI: 254780773 and protein with PDBid: 2dkr_A

>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.01  E-value=2.1e-06  Score=62.40  Aligned_cols=56  Identities=25%  Similarity=0.433  Sum_probs=47.3

Q ss_pred             CCCCCCCCCCHHHH-HHCCCCCEEEEECCCCCCCC--HHHHHHCCCCCCCCCEEEEEECC
Q ss_conf             20002456755653-00145662888878304540--01111101467886316999658
Q gi|254780773|r  120 PVVSNVSPASPAAI-AGVKKGDCIISLDGITVSAF--EEVAPYVRENPLHEISLVLYREH  176 (349)
Q Consensus       120 p~I~~V~~~spA~~-AGL~~GD~Il~InG~~V~s~--~dl~~~i~~~~g~~v~i~v~R~~  176 (349)
                      .+|..|.++|||++ ++|++||+|++|||+++.++  +|+.+.+++.+ .++++++.|+-
T Consensus        32 ~~V~~v~~~g~A~~~g~l~~GD~Il~INg~~v~~~~~~ev~~~l~~~~-~~v~L~v~r~P   90 (93)
T 2dkr_A           32 IYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQ-GSVKLVVRSGP   90 (93)
T ss_dssp             CEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHCC-SEEEEEECCCC
T ss_pred             EEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCC-CEEEEEEEECC
T ss_conf             899998999979974999989999999999989998999999998299-92999999089