HHsearch results for GI: 254780773 and protein with PDBid: 2fne_A

>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1

Probab=98.39  E-value=2.4e-07  Score=68.90  Aligned_cols=58  Identities=22%  Similarity=0.388  Sum_probs=50.2

Q ss_pred             CCCCCCCCCCCHHHHHH-CCCCCEEEEECCCCCCCC--HHHHHHCCCCCCCCCEEEEEECCC
Q ss_conf             32000245675565300-145662888878304540--011111014678863169996587
Q gi|254780773|r  119 KPVVSNVSPASPAAIAG-VKKGDCIISLDGITVSAF--EEVAPYVRENPLHEISLVLYREHV  177 (349)
Q Consensus       119 ~p~I~~V~~~spA~~AG-L~~GD~Il~InG~~V~s~--~dl~~~i~~~~g~~v~i~v~R~~~  177 (349)
                      ...|.+|.|+|||+++| |++||+|++|||+++.++  +|+.+.+++.+ .++++++.|+++
T Consensus        54 ~i~V~~V~~gg~A~~~G~L~~GD~Il~VNg~~v~~~t~~evv~ll~~~~-~~v~L~V~r~~e  114 (117)
T 2fne_A           54 PIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTK-GTVTLMVLSSDE  114 (117)
T ss_dssp             EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC-SSEEEEEEECSC
T ss_pred             CEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCC-CCEEEEEECCCC
T ss_conf             9899998789837861998889999999999988998999999997499-908999984898