HHsearch results for GI: 254780773 and protein with PDBid: 2i6v_A

>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5

Probab=98.83  E-value=2.2e-09  Score=82.96  Aligned_cols=63  Identities=19%  Similarity=0.288  Sum_probs=56.2

Q ss_pred             CCCCCCCCCHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCC-CCCCCCEEEEEECCCCEEEECC
Q ss_conf             000245675565300145662888878304540011111014-6788631699965873131011
Q gi|254780773|r  121 VVSNVSPASPAAIAGVKKGDCIISLDGITVSAFEEVAPYVRE-NPLHEISLVLYREHVGVLHLKV  184 (349)
Q Consensus       121 ~I~~V~~~spA~~AGL~~GD~Il~InG~~V~s~~dl~~~i~~-~~g~~v~i~v~R~~~~~~~~~v  184 (349)
                      .|..+.++|||++|||++||+|+++||++|.+++|+...++. .+++++++++.|+|+. .++.+
T Consensus        22 ~v~~v~~~s~~~~aGl~~gDvI~~ing~~i~~~~~~~~~i~~~~~~~~v~l~v~R~g~~-~~i~v   85 (87)
T 2i6v_A           22 RVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVERDGQQ-HDVYI   85 (87)
T ss_dssp             EEEECSCHHHHHHTTCCTTCEEEEETTEETTCHHHHHHHHHTGGGCSEEEEEEEETTEE-EEEEE
T ss_pred             EEECCCCCCHHHHCCCCCCCEEEEECCEECCCHHHHHHHHHHCCCCCEEEEEEEECCEE-EEEEE
T ss_conf             99616899989987999899999999999889899999998379998799999999999-99999