HHsearch results for GI: 254780773 and protein with PDBid: 2joa_A

>2joa_A Serine protease HTRA1; PDZ, beta-sandwich, cyclically-permuted, protein binding; NMR {Homo sapiens}

Probab=99.13  E-value=2.9e-11  Score=95.92  Aligned_cols=67  Identities=25%  Similarity=0.468  Sum_probs=59.6

Q ss_pred             CCCCCCCCCCHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCEEEEEECCCCEEEECCCCCCC
Q ss_conf             2000245675565300145662888878304540011111014678863169996587313101121100
Q gi|254780773|r  120 PVVSNVSPASPAAIAGVKKGDCIISLDGITVSAFEEVAPYVRENPLHEISLVLYREHVGVLHLKVMPRLQ  189 (349)
Q Consensus       120 p~I~~V~~~spA~~AGL~~GD~Il~InG~~V~s~~dl~~~i~~~~g~~v~i~v~R~~~~~~~~~v~p~~~  189 (349)
                      .+|.+|.|+|||++|||++||+|++|||++|++++|+.+.++  +++++++++.|+++ ..+++++|+..
T Consensus        37 v~V~~V~~~spA~~aGL~~GDvI~~ing~~V~~~~~~~~~i~--~~~~v~l~v~R~g~-~~~l~v~p~~~  103 (105)
T 2joa_A           37 AYIIEVIPDTPAEAGGLKENDVIISINGQSVVSANDVSDVIK--RESTLNMVVRRGNE-DIMITVIPEEI  103 (105)
T ss_dssp             EEEEEECSSSHHHHHTCCTTCEECBCSSCBCCSHHHHHHHHH--HCSSEEEEEEETTE-EEEEEECCBCC
T ss_pred             EEEEEECCCCHHHHCCCCCCEEEEEECCEECCCHHHHHHHHH--CCCEEEEEEEECCE-EEEEEEEECCC
T ss_conf             899997999969986999981999999999789999999971--89969999999999-99999995567