HHsearch results for GI: 254780773 and protein with PDBid: 2koj_A

>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A

Probab=98.25  E-value=8.2e-07  Score=65.20  Aligned_cols=61  Identities=28%  Similarity=0.483  Sum_probs=51.3

Q ss_pred             CCCCCCCCCCCCHHHHHH-CCCCCEEEEECCCCCCCC--HHHHHHCCCCC-CCCCEEEEEECCCC
Q ss_conf             332000245675565300-145662888878304540--01111101467-88631699965873
Q gi|254780773|r  118 MKPVVSNVSPASPAAIAG-VKKGDCIISLDGITVSAF--EEVAPYVRENP-LHEISLVLYREHVG  178 (349)
Q Consensus       118 ~~p~I~~V~~~spA~~AG-L~~GD~Il~InG~~V~s~--~dl~~~i~~~~-g~~v~i~v~R~~~~  178 (349)
                      ...+|.+|.|+|||+++| |++||+|++|||+++.++  +|..+.+++.+ ...+++++.|....
T Consensus        39 ~~i~V~~v~~~g~A~~~G~l~~GD~Il~INg~~v~~~t~~e~~~ll~~~~~~~~v~l~v~r~~~~  103 (111)
T 2koj_A           39 APIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRSTKMEGTVSLLVFRQEEA  103 (111)
T ss_dssp             SCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHCCCSSEEEEEEEECCCC
T ss_pred             CCEEEEEECCCCHHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHHCCCCCEEEEEEECCCCC
T ss_conf             58899998999958971999999999999999988999999999998189999899999828989