HHsearch results for GI: 254780773 and protein with PDBid: 2kpk_A
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=98.11 E-value=1.6e-06 Score=63.25 Aligned_cols=57 Identities=23% Similarity=0.322 Sum_probs=49.7
Q ss_pred CCCCCCCCCCHHHHHH-CCCCCEEEEECCCCCCCC--HHHHHHCCCC-CCCCCEEEEEECC
Q ss_conf 2000245675565300-145662888878304540--0111110146-7886316999658
Q gi|254780773|r 120 PVVSNVSPASPAAIAG-VKKGDCIISLDGITVSAF--EEVAPYVREN-PLHEISLVLYREH 176 (349)
Q Consensus 120 p~I~~V~~~spA~~AG-L~~GD~Il~InG~~V~s~--~dl~~~i~~~-~g~~v~i~v~R~~ 176 (349)
.+|.+|.++|||+++| |++||+|++|||+++..+ ++.++.++.. .+..+++++.|..
T Consensus 45 i~V~~v~~gg~A~~~g~l~~GD~Il~INg~~v~~~t~~eav~~lr~~~~g~~v~L~v~R~~ 105 (129)
T 2kpk_A 45 LQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGY 105 (129)
T ss_dssp EEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTEEEEEEEEECS
T ss_pred EEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCCCCCEEEEEEEECC
T ss_conf 8999966998699858998898999999998789989999999967999998999999499