HHsearch results for GI: 254780773 and protein with PDBid: 2vsp_A

>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=98.42  E-value=2.4e-07  Score=68.85  Aligned_cols=61  Identities=21%  Similarity=0.446  Sum_probs=50.4

Q ss_pred             CCCCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCCCCH--HHHHHCCCCCCCCCEEEEEECC
Q ss_conf             2333320002456755653001456628888783045400--1111101467886316999658
Q gi|254780773|r  115 TGVMKPVVSNVSPASPAAIAGVKKGDCIISLDGITVSAFE--EVAPYVRENPLHEISLVLYREH  176 (349)
Q Consensus       115 ~g~~~p~I~~V~~~spA~~AGL~~GD~Il~InG~~V~s~~--dl~~~i~~~~g~~v~i~v~R~~  176 (349)
                      .+...++|.+|.++|||+++||++||+|++|||+++.++.  |+.+.++..+ +++++++.+..
T Consensus        24 ~~~~~~~V~~V~~gspA~~~gl~~GD~Il~VnG~~v~~~~~~ev~~~l~~~~-~~v~L~V~~~~   86 (91)
T 2vsp_A           24 RGLPGSFIKEVQKGGPADLAGLEDEDVIIEVNGVNVLDEPYEKVVDRIQSSG-KNVTLLVCGKK   86 (91)
T ss_dssp             TTCSCCBC-CCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHTTSC-SEEEEEEEC--
T ss_pred             ECCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCC-CEEEEEEECCC
T ss_conf             3899979999189898998699999999999999999998999999997599-96999998988