HHsearch results for GI: 254780773 and protein with PDBid: 2vsp_A
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=98.42 E-value=2.4e-07 Score=68.85 Aligned_cols=61 Identities=21% Similarity=0.446 Sum_probs=50.4
Q ss_pred CCCCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCCCCH--HHHHHCCCCCCCCCEEEEEECC
Q ss_conf 2333320002456755653001456628888783045400--1111101467886316999658
Q gi|254780773|r 115 TGVMKPVVSNVSPASPAAIAGVKKGDCIISLDGITVSAFE--EVAPYVRENPLHEISLVLYREH 176 (349)
Q Consensus 115 ~g~~~p~I~~V~~~spA~~AGL~~GD~Il~InG~~V~s~~--dl~~~i~~~~g~~v~i~v~R~~ 176 (349)
.+...++|.+|.++|||+++||++||+|++|||+++.++. |+.+.++..+ +++++++.+..
T Consensus 24 ~~~~~~~V~~V~~gspA~~~gl~~GD~Il~VnG~~v~~~~~~ev~~~l~~~~-~~v~L~V~~~~ 86 (91)
T 2vsp_A 24 RGLPGSFIKEVQKGGPADLAGLEDEDVIIEVNGVNVLDEPYEKVVDRIQSSG-KNVTLLVCGKK 86 (91)
T ss_dssp TTCSCCBC-CCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHTTSC-SEEEEEEEC--
T ss_pred ECCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCC-CEEEEEEECCC
T ss_conf 3899979999189898998699999999999999999998999999997599-96999998988