RPSBLAST alignment for GI: 254780773 and conserved domain: TIGR00054

>gnl|CDD|161683 TIGR00054, TIGR00054, RIP metalloprotease RseP. A model that detects fragments as well matches a number of members of the PEPTIDASE FAMILY S2C. The region of match appears not to overlap the active site domain. Length = 420

 Score =  121 bits (305), Expect = 3e-28
 Identities = 76/228 (33%), Positives = 116/228 (50%), Gaps = 12/228 (5%)

Query: 120 PVVSNVSPASPAAIAGVKKGDCIISLDGITVSAFEEVAPYVRENPLHEISLVLYREHVGV 179
           PV+S+V+P SPA  AG+K+GD I S++G  + ++ +    V+ENP   + + + R     
Sbjct: 205 PVLSDVTPNSPAEKAGLKEGDYIQSINGEKLRSWTDFVSAVKENPGKSMDIKVERNG-ET 263

Query: 180 LHLKVMPRLQDTVDRFGIKRQVPSVGISFSYDETKLHSRTVLQSFSRGLDEISSITRGFL 239
           L + + P  +  +           +GIS S       S  +L +F++G      I +  L
Sbjct: 264 LSISLTPEAKGKI----------GIGISPSL-APLEVSYGILNAFAKGASATVDIVKLIL 312

Query: 240 GVLSSAFGKDTRLNQISGPVGIARIAKNFFDHGFNAYIAFLAMFSWAIGFMNLLPIPILD 299
             L        +L  +SGPVGI + A +  + G    + F A  S  +G MNLLPIP LD
Sbjct: 313 TNLGKLITGSFKLKNLSGPVGIVKGAGSSANSGIVYLLQFGAFLSINLGIMNLLPIPALD 372

Query: 300 GGHLITFLLEMIRGKSLGVSVTRVITRMGLCIILFLFFLGIRNDIYGL 347
           GG L+   +E IRGK L   V   + R+G+  +LFL  LG+ ND+  L
Sbjct: 373 GGQLLFLFIEAIRGKPLPEKVQAFVYRIGVAFLLFLMGLGLFNDLLRL 420