RPSBLAST alignment for GI: 254780773 and conserved domain: TIGR00054

>gnl|CDD|161683 TIGR00054, TIGR00054, RIP metalloprotease RseP. A model that detects fragments as well matches a number of members of the PEPTIDASE FAMILY S2C. The region of match appears not to overlap the active site domain. Length = 420

 Score =  104 bits (261), Expect = 3e-23
 Identities = 57/165 (34%), Positives = 94/165 (56%), Gaps = 19/165 (11%)

Query: 9   LYTVSLII----IVVIHEFGHYMVARLCNIRVLSFSVGFGPELIGITSRSGVRWKVSLIP 64
           L+ ++ I+    ++ +HE GH++ ARLC I+V  FS+GFGP+++    ++G  + +SLIP
Sbjct: 4   LWILASILALAVLIFVHELGHFLAARLCGIKVERFSIGFGPKILKF-KKNGTEYAISLIP 62

Query: 65  LGGYVSFSEDEKDMR---------SFFCAAPWKKILTVLAGPLANCVMAILFFTFFFYNT 115
           LGGYV     +K+M           F   + ++K + + AGPLAN + AI F   F    
Sbjct: 63  LGGYVKMKGLDKEMEVKPPETDGDLFNNKSVFQKAIIIFAGPLANFIFAI-FVYIFISLI 121

Query: 116 GV----MKPVVSNVSPASPAAIAGVKKGDCIISLDGITVSAFEEV 156
           GV    + PV+  +   S A  AG++ GD I+S++G  +  F++V
Sbjct: 122 GVPGYEVGPVIELLDKNSIALEAGIEPGDEILSVNGNKIPGFKDV 166