RPSBLAST alignment of GI: 254780773 and protein with PDBid: 1lcy

>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, IAP-binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1 Length = 325
 Score = 52.6 bits (125), Expect = 1e-07
 Identities = 27/130 (20%), Positives = 52/130 (40%), Gaps = 3/130 (2%)

Query: 47  LIGITSRSGVRWKVSLIPLGGYVSFSED-EKDMRSFFCAAPWKKILTVLAGPLANCVMAI 105
           +IG+ +          IP      F    EK   S   +   ++ + V+   L+  ++A 
Sbjct: 184 VIGVNTMKVTAGISFAIPSDRLREFLHRGEKKNSSSGISGSQRRYIGVMMLTLSPSILAE 243

Query: 106 LFFTFFFYNTGVMKPVVSNVSPASPAAIAGVKKGDCIISLDGITVSAFEEVAPYVRENPL 165
           L      +       ++  V   SPA  AG++ GD I+++    V   E+V   VR    
Sbjct: 244 LQLREPSFPDVQHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAEDVYEAVRTQS- 302

Query: 166 HEISLVLYRE 175
            ++++ + R 
Sbjct: 303 -QLAVQIRRG 311