HHsearch alignment for GI: 254780774 and conserved domain: COG0575
>COG0575 CdsA CDP-diglyceride synthetase [Lipid metabolism].
Probab=100.00 E-value=0 Score=370.99 Aligned_cols=251 Identities=34% Similarity=0.549 Sum_probs=191.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC--CHHH-H
Q ss_conf 245799999999999999998533999999999999999999998322344206999999999999875201--2157-8
Q gi|254780774|r 4 ELKWRIVTGLVMACSFILISWIGGIWFRLWTMVMSLCIYYEWKIITGSVSLSLSEKILGLFTFFLVFFMIIT--GFFK-S 80 (269)
Q Consensus 4 ~l~~Riita~il~~i~~~~l~~g~~~~~i~i~ii~~l~~~E~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~-~ 80 (269)
T Consensus 1 ~~~~r~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (265)
T COG0575 1 MLKQRVITAIVLLILFLLALLVGGLYFALLVLLLAILAILEAYRANRFAVLAGPLILGLPIDLGLVLLDGRRLLGDGKET 80 (265)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHH
T ss_conf 92589999999999999999998899999999999999999999851011111248999999999999877873324799
Q ss_pred HHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 999--9999999999999510135899999999999999999996066-6696999999999999610676300102345
Q gi|254780774|r 81 AFF--LLMLYSFIDWMISIMKNRAFWRALGVVYSGLPSIALSSLRGDD-AKGCVIVFFVLSVVWATDIFAYFIGRFVGGP 157 (269)
Q Consensus 81 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~yi~~~~~~l~~l~~~~-~~g~~~il~ll~~v~~~D~~AY~~G~~~Gk~ 157 (269)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~l~~~vw~~Di~Ayf~Gr~fGk~ 160 (265)
T COG0575 81 LLGFLLGFLLGLVLLGVIYYLSDSLFKLFGLLYVGVGLLALLPFRLGVLYSGLILLLLLFLGVWAGDIGAYFVGRRFGKH 160 (265)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999999999999987887777889999999999999975555419999999999999988899999982899
Q ss_pred CCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 3000028540244788998999998864210146--65643013576678899988779999998747998544879987
Q gi|254780774|r 158 KIAPKISPRKTWSGSIGGLFCGVGVGVALLSFFC--ANCFELALAVSILLSVSCQLGDLFESYIKRYFGIKQSGWLLPGH 235 (269)
Q Consensus 158 kl~p~ISP~KT~EG~igG~i~s~i~~~~~~~~~~--~~~~~~~i~l~~~~~i~~~~GDL~eS~iKR~~~vKDsg~llpGH 235 (269)
T Consensus 161 kl~p~iSP~KT~eGfigG~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~lGDL~eS~iKR~~giKDsg~liPGH 240 (265)
T COG0575 161 KLAPKISPKKTWEGFIGGALGAVLVAVLVIFLLSSLILNIWTLLILGLLLVLTSQLGDLFESYIKRLLGIKDSGWLIPGH 240 (265)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 88888099977899899999999999999998401115799999999999999987789999999971999787778876
Q ss_pred CCHHHHHHHHHHHHHHHHHHH
Q ss_conf 716762647999999999999
Q gi|254780774|r 236 GGVMDRVDGLVFSCFLMSAIS 256 (269)
Q Consensus 236 GGilDR~Ds~l~~~p~~~~~~ 256 (269)
T Consensus 241 GGilDR~Dsl~~~--~~~~~~ 259 (265)
T COG0575 241 GGILDRFDSLLFV--AVYLFL 259 (265)
T ss_pred CCCHHHHHHHHHH--HHHHHH
T ss_conf 6312016669999--999999