RPS-BLAST 2.2.22 [Sep-27-2009] Database: scop70_1_75 13,730 sequences; 2,407,596 total letters Searching..................................................done Query= gi|254780774|ref|YP_003065187.1| phosphatidate cytidylyltransferase protein [Candidatus Liberibacter asiaticus str. psy62] (269 letters) >d2e2aa_ a.7.2.1 (A:) Enzyme IIa from lactose specific PTS, IIa-lac {Lactococcus lactis [TaxId: 1358]} Length = 104 Score = 26.1 bits (58), Expect = 3.5 Identities = 5/19 (26%), Positives = 9/19 (47%) Query: 251 LMSAISFFGIATEMIGVLK 269 LM+ I + +I + K Sbjct: 83 LMTTILLKDVIHHLIELYK 101 >d1mqoa_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacillus cereus [TaxId: 1396]} Length = 221 Score = 24.9 bits (53), Expect = 8.3 Identities = 8/53 (15%), Positives = 16/53 (30%) Query: 189 FFCANCFELALAVSILLSVSCQLGDLFESYIKRYFGIKQSGWLLPGHGGVMDR 241 + A + + + S + ++PGHG V D+ Sbjct: 158 LVGGCLVKSTSAKDLGNVADAYVNEWSTSIENVLKRYRNINAVVPGHGEVGDK 210 Database: scop70_1_75 Posted date: Mar 27, 2010 6:21 PM Number of letters in database: 2,407,596 Number of sequences in database: 13,730 Lambda K H 0.334 0.147 0.484 Gapped Lambda K H 0.267 0.0621 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 13730 Number of Hits to DB: 1,071,615 Number of extensions: 49560 Number of successful extensions: 266 Number of sequences better than 10.0: 1 Number of HSP's gapped: 259 Number of HSP's successfully gapped: 45 Length of query: 269 Length of database: 2,407,596 Length adjustment: 84 Effective length of query: 185 Effective length of database: 1,254,276 Effective search space: 232041060 Effective search space used: 232041060 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 39 (21.5 bits) S2: 52 (24.0 bits)