BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780775|ref|YP_003065188.1| undecaprenyl diphosphate
synthase [Candidatus Liberibacter asiaticus str. psy62]
(243 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780775|ref|YP_003065188.1| undecaprenyl diphosphate synthase [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040452|gb|ACT57248.1| undecaprenyl diphosphate synthase [Candidatus Liberibacter
asiaticus str. psy62]
Length = 243
Score = 498 bits (1281), Expect = e-139, Method: Compositional matrix adjust.
Identities = 243/243 (100%), Positives = 243/243 (100%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI
Sbjct: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA
Sbjct: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP
Sbjct: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS
Sbjct: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
Query: 241 KKG 243
KKG
Sbjct: 241 KKG 243
>gi|315121992|ref|YP_004062481.1| undecaprenyl diphosphate synthase [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495394|gb|ADR51993.1| undecaprenyl diphosphate synthase [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 243
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/232 (80%), Positives = 208/232 (89%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
PDHI IIMDGNGRWA RGLPR AGHRKGIEVF+EIV A E+G+KNLTIFAFSI+NWRR
Sbjct: 7 PDHIAIIMDGNGRWARERGLPRYAGHRKGIEVFSEIVVVATEIGVKNLTIFAFSIDNWRR 66
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SEI+++VKLI SF+ KGF LKKNN+KVRVIGNRLSLDDDIL +LKE E++T+ NTGL
Sbjct: 67 PNSEITQIVKLINSFINKGFDVLKKNNVKVRVIGNRLSLDDDILLLLKEIEEKTQFNTGL 126
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
LFIAFNYSSRDEISRA K I +DIESG +CSHD+ SSLIA+YLDTSD+PDPDLIIRTGG
Sbjct: 127 KLFIAFNYSSRDEISRAFKGILKDIESGFLCSHDMSSSLIARYLDTSDIPDPDLIIRTGG 186
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
EKRLSDFLLWQ AYSEFVFIPEYWPDFSRELF +A++QY LRDRRFGGLSKK
Sbjct: 187 EKRLSDFLLWQAAYSEFVFIPEYWPDFSRELFLYAVDQYALRDRRFGGLSKK 238
>gi|222085861|ref|YP_002544392.1| undecaprenyl diphosphate synthase [Agrobacterium radiobacter K84]
gi|221723309|gb|ACM26465.1| undecaprenyl diphosphate synthase [Agrobacterium radiobacter K84]
Length = 247
Score = 308 bits (788), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 140/235 (59%), Positives = 182/235 (77%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S+ P+H+ IIMDGNGRWA ARGLPR GHRKG+E E V AA ++G+K LT+FAFS N
Sbjct: 7 SAIPEHVAIIMDGNGRWANARGLPRTMGHRKGVEAVRETVRAAGDIGVKYLTLFAFSSEN 66
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP +E+S+L+ L+K+F+++ L + N+++RVIG+R +L DIL +L EAE+ TR N
Sbjct: 67 WRRPETEVSDLLGLLKAFIRRDLAELHRQNVRIRVIGDRNNLRGDILPLLIEAEETTRDN 126
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T L L IAFNY SRDEISRA+ ++ +D+E+G + D+ L+ LDT+ +PDPDLIIR
Sbjct: 127 TALTLVIAFNYGSRDEISRALVSLARDVEAGRLRPQDISPELVGARLDTAGIPDPDLIIR 186
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
T GE+RLS+FLLWQ AYSEF+F+PEYWPDFSR+LFF AL +Y RDRRFGGLS K
Sbjct: 187 TSGEERLSNFLLWQAAYSEFMFMPEYWPDFSRDLFFSALEKYAARDRRFGGLSAK 241
>gi|209549186|ref|YP_002281103.1| undecaprenyl diphosphate synthase [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209534942|gb|ACI54877.1| undecaprenyl diphosphate synthase [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 247
Score = 300 bits (768), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 136/233 (58%), Positives = 178/233 (76%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA RGLPR GHRKG+E E V AA GIK LT+FAFS NWRR
Sbjct: 10 PEHVAIIMDGNGRWAKQRGLPRTMGHRKGVEAVRETVRAAGAAGIKYLTLFAFSSENWRR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+S+L+ L+K+F+++ L + N++++VIG+R SL +DIL +L EAE+ T+ NT L
Sbjct: 70 PEAEVSDLLGLLKAFIRRDLAELHRQNVRIKVIGDRHSLRNDILGLLLEAEETTKDNTAL 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IAFNY SRDEISRA+ ++ +D+E+G + + D+ SLI LDT+ +PDPDLIIRT G
Sbjct: 130 TLVIAFNYGSRDEISRAVVSLARDVEAGRLRAQDITPSLINARLDTAGIPDPDLIIRTSG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
E+RLS+FLLWQ AYSEF+F+PEYWPDFS E+F AL ++ RDRRFGGLS +
Sbjct: 190 EERLSNFLLWQAAYSEFIFVPEYWPDFSPEIFRSALEKFASRDRRFGGLSSQA 242
>gi|190891611|ref|YP_001978153.1| undecaprenyl pyrophosphate synthetase [Rhizobium etli CIAT 652]
gi|190696890|gb|ACE90975.1| undecaprenyl pyrophosphate synthetase protein [Rhizobium etli CIAT
652]
Length = 247
Score = 299 bits (765), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 135/233 (57%), Positives = 177/233 (75%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA RGLPR GHRKG+E E V AA GIK LT+FAFS NWRR
Sbjct: 10 PEHVAIIMDGNGRWAKQRGLPRTMGHRKGVEAVRETVRAAGAAGIKYLTLFAFSSENWRR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+S+L+ L+K+F+++ L + N+++RVIG+R SL DIL +L EAE+ T+ NT L
Sbjct: 70 PEAEVSDLLGLLKAFIRRDLAELHRQNVRIRVIGDRHSLRSDILGLLLEAEETTKDNTAL 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IAFNY SRDEISRA+ ++ +D+E+G + + D+ +L+ LDT+ +PDPDLIIRT G
Sbjct: 130 TLVIAFNYGSRDEISRAVVSLARDVEAGRLRAQDITPALLDARLDTAGIPDPDLIIRTSG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
E+RLS+FLLWQ AYSEF+F+PEYWPDFS E+F AL ++ RDRRFGGLS +
Sbjct: 190 EERLSNFLLWQAAYSEFIFVPEYWPDFSPEIFRSALEKFASRDRRFGGLSSQA 242
>gi|327189226|gb|EGE56405.1| undecaprenyl pyrophosphate synthetase protein [Rhizobium etli
CNPAF512]
Length = 247
Score = 299 bits (765), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 135/233 (57%), Positives = 177/233 (75%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA RGLPR GHRKG+E E V AA GIK LT+FAFS NWRR
Sbjct: 10 PEHVAIIMDGNGRWAKQRGLPRTMGHRKGVEAVRETVRAAGAAGIKYLTLFAFSSENWRR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+S+L+ L+K+F+++ L + N+++RVIG+R SL DIL +L EAE+ T+ NT L
Sbjct: 70 PEAEVSDLLGLLKAFIRRDLAELHRQNVRIRVIGDRHSLRSDILGLLLEAEETTKDNTAL 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IAFNY SRDEISRA+ ++ +D+E+G + + D+ +L+ LDT+ +PDPDLIIRT G
Sbjct: 130 TLVIAFNYGSRDEISRAVVSLARDVEAGRLRAQDITPALLDARLDTAGIPDPDLIIRTSG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
E+RLS+FLLWQ AYSEF+F+PEYWPDFS E+F AL ++ RDRRFGGLS +
Sbjct: 190 EERLSNFLLWQAAYSEFIFVPEYWPDFSPEIFRSALEKFASRDRRFGGLSSQA 242
>gi|116251981|ref|YP_767819.1| undecaprenyl pyrophosphate synthetase [Rhizobium leguminosarum bv.
viciae 3841]
gi|115256629|emb|CAK07717.1| putative undecaprenyl pyrophosphate synthetase [Rhizobium
leguminosarum bv. viciae 3841]
Length = 247
Score = 296 bits (758), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 134/233 (57%), Positives = 176/233 (75%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA RGLPR GHRKG+E E V AA GIK LT+FAFS NWRR
Sbjct: 10 PEHVAIIMDGNGRWAKQRGLPRTMGHRKGVEAVRETVRAAGAAGIKYLTLFAFSSENWRR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+S+L+ L+K+F+++ L + N++++VIG+R SL DIL +L EAE+ T+ NT L
Sbjct: 70 PEAEVSDLLGLLKAFIRRDLAELHRQNVRIKVIGDRHSLRSDILGLLLEAEETTKDNTSL 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IAFNY SRDEI+RA+ ++ +D+E+G + + D+ +LI LDT+ +PDPDLIIRT G
Sbjct: 130 TLVIAFNYGSRDEIARAVVSLARDVEAGRLRAQDITPALINARLDTAGIPDPDLIIRTSG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
E+RLS+FLLWQ AYSEF+F+PEYWPDFS E+F AL + RDRRFGGLS +
Sbjct: 190 EERLSNFLLWQAAYSEFIFLPEYWPDFSPEIFRSALETFASRDRRFGGLSSQA 242
>gi|241204508|ref|YP_002975604.1| undecaprenyl diphosphate synthase [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240858398|gb|ACS56065.1| undecaprenyl diphosphate synthase [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 247
Score = 296 bits (757), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 134/233 (57%), Positives = 177/233 (75%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA RGLPR GHRKG+E E V AA GIK LT+FAFS NWRR
Sbjct: 10 PEHVAIIMDGNGRWAKQRGLPRTMGHRKGVEAVRETVRAAGAAGIKYLTLFAFSSENWRR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+S+L+ L+K+F+++ L + N++++VIG+R SL DIL +L EAE+ T+ NT L
Sbjct: 70 PEAEVSDLLGLLKAFIRRDLAELHRQNVRIKVIGDRDSLRSDILGLLLEAEETTKDNTSL 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IAFNY SRDEI+RA+ ++ +D+E+G + + D+ +LI LDT+ +PDPDLIIRT G
Sbjct: 130 TLVIAFNYGSRDEIARAVVSLARDVEAGRLRAQDITPALINARLDTAGIPDPDLIIRTSG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
E+RLS+FLLWQ AYSEF+F+PEYWPDFS E+F AL+ + RDRRFGGLS +
Sbjct: 190 EERLSNFLLWQAAYSEFIFLPEYWPDFSPEIFRSALDTFASRDRRFGGLSSQA 242
>gi|15888704|ref|NP_354385.1| undecaprenyl pyrophosphate synthase [Agrobacterium tumefaciens str.
C58]
gi|42559843|sp|Q8UFL9|UPPS_AGRT5 RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|15156444|gb|AAK87170.1| undecaprenyl pyrophosphate synthase [Agrobacterium tumefaciens str.
C58]
Length = 247
Score = 292 bits (748), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 132/241 (54%), Positives = 174/241 (72%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + SS P+H+ IIMDGNGRWA RGLPR GHR+G+E E V AA + GI LT+F
Sbjct: 1 MPTTTRSSIPEHVAIIMDGNGRWAKQRGLPRVMGHRRGVEAVRETVRAAGDCGISYLTLF 60
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP SE+S+L+ L+K+F+++ L + N++VR+IG+R L DI +L+EAE
Sbjct: 61 AFSSENWRRPESEVSDLMGLLKAFIRRDLAELHRENVRVRIIGDRQGLKTDIRSLLEEAE 120
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T NT L L IAFNY SRDEI+RA +I +D+ G + + + +I+ LDTS +PD
Sbjct: 121 QMTAGNTKLTLVIAFNYGSRDEITRATASIARDVAEGRLSADAITPEMISSRLDTSGMPD 180
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDLIIRT GE+RLS+FLLWQ AYSEF+F+PEYWPDF R+ FF A+ QY RDRRFG L++
Sbjct: 181 PDLIIRTSGEERLSNFLLWQAAYSEFLFVPEYWPDFDRQRFFSAIEQYATRDRRFGALAE 240
Query: 242 K 242
+
Sbjct: 241 Q 241
>gi|325292741|ref|YP_004278605.1| Undecaprenyl pyrophosphate synthase [Agrobacterium sp. H13-3]
gi|325060594|gb|ADY64285.1| Undecaprenyl pyrophosphate synthase [Agrobacterium sp. H13-3]
Length = 247
Score = 291 bits (745), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 131/241 (54%), Positives = 175/241 (72%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + SS P+H+ IIMDGNGRWA RGLPR GHR+G+E E V AA + G++ LT+F
Sbjct: 1 MPTTTRSSIPEHVAIIMDGNGRWAKQRGLPRVMGHRRGVEAVRETVRAAGDCGVRYLTLF 60
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP SE+S+L+ L+K+F+++ L + N++VR+IG+R L +DI +L+EAE
Sbjct: 61 AFSSENWRRPESEVSDLMGLLKAFIRRDLAELHRENVRVRIIGDRQGLKNDIRSLLEEAE 120
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T NT L L IAFNY SRDEI+RA I +D+ G + + + +I+ LDTS +PD
Sbjct: 121 HMTADNTRLTLVIAFNYGSRDEIARATMAIARDVAEGRLDAESITPEIISARLDTSGIPD 180
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDLIIRT GE+RLS+FLLWQ AYSEF+F+PEYWPDF R+ FF A+ QY RDRRFG L++
Sbjct: 181 PDLIIRTSGEERLSNFLLWQAAYSEFLFVPEYWPDFDRQRFFSAIEQYATRDRRFGALAE 240
Query: 242 K 242
+
Sbjct: 241 Q 241
>gi|222148858|ref|YP_002549815.1| undecaprenyl pyrophosphate synthase [Agrobacterium vitis S4]
gi|221735844|gb|ACM36807.1| undecaprenyl pyrophosphate synthase [Agrobacterium vitis S4]
Length = 248
Score = 290 bits (742), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 125/233 (53%), Positives = 172/233 (73%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S+ P+H+ IIMDGNGRWA RG+PR GHR+G+E +V A EVG++ LT+FAFS N
Sbjct: 7 SAVPEHVAIIMDGNGRWANQRGMPRAYGHRQGMEALQTVVRTAGEVGVRYLTLFAFSSEN 66
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP +EI++L L+K+F+++ L+ NN++VR+IG R +L DIL +L EAE+ TR N
Sbjct: 67 WRRPETEITDLFGLLKTFVRRDLAELRANNVRVRIIGERSTLKSDILKLLIEAEETTRTN 126
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
TG+ + IAFNY +RDE++RA+ + +D+++G + + + I+ LDT+ +PDPDLIIR
Sbjct: 127 TGMTMVIAFNYGARDEMTRAVSALVRDVQAGLLPASAITQEAISARLDTAGIPDPDLIIR 186
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
T GE+RLS+FLLWQ AYSE +F+PEYWPDFSRE F L Y R RRFGGL+
Sbjct: 187 TSGEERLSNFLLWQAAYSELIFVPEYWPDFSRESFLATLELYASRSRRFGGLA 239
>gi|227821901|ref|YP_002825871.1| undecaprenyl pyrophosphate synthase [Sinorhizobium fredii NGR234]
gi|227340900|gb|ACP25118.1| undecaprenyl pyrophosphate synthetase [Sinorhizobium fredii NGR234]
Length = 247
Score = 280 bits (715), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 124/236 (52%), Positives = 175/236 (74%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+S++ P H+ IIMDGNGRWA ARGLPR GHRKG+E V AAE+GI+ LT+FAFS
Sbjct: 5 VSTNVPAHVAIIMDGNGRWANARGLPRTMGHRKGVEAVRGAVKTAAELGIRYLTLFAFSS 64
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+S+L+ L+K+F+++ L + N+++RVIG+R +L DIL +L EAE+ T
Sbjct: 65 ENWSRPEDEVSDLMGLLKAFIRRDLADLHRENVRIRVIGDRANLSGDILPLLIEAEETTS 124
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
NTG+ L IAFNY +RDE++RA++ + +++ +G + D+ + IA LDT+ +PDPDLI
Sbjct: 125 ANTGITLVIAFNYGARDELARAMRRLAEEVATGRLRPDDITADRIAASLDTAGIPDPDLI 184
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
+RT GE+RLS+FLLWQ AYSE +F+PE WPDF+R+ F A+ +Y R+RRFGGL +
Sbjct: 185 LRTSGEERLSNFLLWQGAYSELLFVPELWPDFTRDTFIAAIEKYAARERRFGGLPQ 240
>gi|307317017|ref|ZP_07596458.1| undecaprenyl diphosphate synthase [Sinorhizobium meliloti AK83]
gi|306897105|gb|EFN27850.1| undecaprenyl diphosphate synthase [Sinorhizobium meliloti AK83]
Length = 247
Score = 279 bits (713), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 124/231 (53%), Positives = 173/231 (74%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA ARGLPR GHRKG+E V AAE+GI+ LT+FAFS NW R
Sbjct: 10 PAHVAIIMDGNGRWANARGLPRTMGHRKGVEAVRGAVRTAAEIGIRYLTLFAFSSENWNR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+S+L+ L+K+F+++ L + N+++RVIG+R +L DIL +L EAE+ T NTG+
Sbjct: 70 PENEVSDLMGLLKAFIRRDLADLHRENVRIRVIGDRSNLSGDILPLLIEAEETTIANTGI 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ IAFNY +RDE++RA++ + D+ +G + ++ + I+ +DT+ +PDPDLIIRT G
Sbjct: 130 TVVIAFNYGARDELARAMRRLAGDVAAGRLRPEEITAERISSTIDTAGIPDPDLIIRTSG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E+RLS+FLLWQ AYSE +FIP+ WPDF+RE FF A+ QY R+RRFGGL++
Sbjct: 190 EERLSNFLLWQGAYSELLFIPDLWPDFTRETFFAAIEQYACRERRFGGLTQ 240
>gi|15965252|ref|NP_385605.1| putative undecaprenyl pyrophosphate synthetase protein
[Sinorhizobium meliloti 1021]
gi|307309275|ref|ZP_07588943.1| undecaprenyl diphosphate synthase [Sinorhizobium meliloti BL225C]
gi|42559859|sp|Q92Q51|UPPS_RHIME RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|15074432|emb|CAC46078.1| Putative undecaprenyl pyrophosphate synthetase [Sinorhizobium
meliloti 1021]
gi|306900276|gb|EFN30893.1| undecaprenyl diphosphate synthase [Sinorhizobium meliloti BL225C]
Length = 247
Score = 277 bits (709), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 123/231 (53%), Positives = 173/231 (74%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA ARGLPR GHRKG+E V AAE+GI+ LT+FAFS NW R
Sbjct: 10 PAHVAIIMDGNGRWANARGLPRTMGHRKGVEAVRGAVRTAAEIGIRYLTLFAFSSENWNR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+S+L+ L+K+F+++ L + N+++RVIG+R +L DIL +L EAE+ T NTG+
Sbjct: 70 PENEVSDLMGLLKAFIRRDLADLHRENVRIRVIGDRSNLSGDILPLLIEAEETTIANTGI 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ IAFNY +RDE++RA++ + ++ +G + ++ + I+ +DT+ +PDPDLIIRT G
Sbjct: 130 TVVIAFNYGARDELARAMRRLAGEVAAGRLRPEEITAERISSTIDTAGIPDPDLIIRTSG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E+RLS+FLLWQ AYSE +FIP+ WPDF+RE FF A+ QY R+RRFGGL++
Sbjct: 190 EERLSNFLLWQGAYSELLFIPDLWPDFTRETFFAAIEQYACRERRFGGLTQ 240
>gi|150396354|ref|YP_001326821.1| undecaprenyl pyrophosphate synthase [Sinorhizobium medicae WSM419]
gi|150027869|gb|ABR59986.1| undecaprenyl diphosphate synthase [Sinorhizobium medicae WSM419]
Length = 252
Score = 276 bits (705), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 123/231 (53%), Positives = 172/231 (74%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA ARGLPR GHRKG+E V AAE+GI+ LT+FAFS NW R
Sbjct: 15 PAHVAIIMDGNGRWANARGLPRTMGHRKGVEAVRGAVKTAAELGIRYLTLFAFSSENWNR 74
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+S+L+ L+K+F+++ L + N+++RVIG+R +L DIL +L EAE+ T N+G+
Sbjct: 75 PENEVSDLMGLLKAFIRRDLADLHRENVRIRVIGDRSNLSGDILPLLIEAEETTIANSGI 134
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ IAFNY +RDE++RA++++ + + +G + ++ I+ +DT+ VPDPDLIIRT G
Sbjct: 135 TVIIAFNYGARDELARAMRHLAEHVAAGRLRPDEITPERISATIDTAGVPDPDLIIRTSG 194
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E+RLS+FLLWQ AYSE +FIPE WPDF+RE F A+ QY R+RRFGGL++
Sbjct: 195 EERLSNFLLWQGAYSELLFIPELWPDFTRETFLAAIEQYACRERRFGGLAQ 245
>gi|146341065|ref|YP_001206113.1| undecaprenyl pyrophosphate synthase [Bradyrhizobium sp. ORS278]
gi|146193871|emb|CAL77888.1| Undecaprenyl pyrophosphate synthetase 2 (UPP synthetase 2)
(Di-trans,poly-cis-decaprenylcistransferase 2)
(Undecaprenyl diphosphate synthase 2) (UDS 2)
[Bradyrhizobium sp. ORS278]
Length = 252
Score = 272 bits (695), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 121/235 (51%), Positives = 164/235 (69%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P H+ IIMDGNGRWAAARGLPR GHR+G+E +V A+ E+GI+ LTIF+FS N
Sbjct: 15 SDAPAHVAIIMDGNGRWAAARGLPRAEGHRRGVEALRRVVRASDELGIRYLTIFSFSSEN 74
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP SEI +L L++ F++ +L ++ ++VRVIG R L+ DI +L EAE+ TR N
Sbjct: 75 WSRPASEIGDLFGLLRRFIRNDLATLHRDGVRVRVIGERAGLEPDICALLSEAEELTRAN 134
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T L L +AFNY SR EI+RA +N+ +++ G +D+ I +LD D+PDPDLIIR
Sbjct: 135 TKLTLVVAFNYGSRQEIARAAQNLAREVAEGRRDPASIDADAIGAHLDVPDIPDPDLIIR 194
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
T GE+RLS+FL+WQ AYSE VF+P++WPDF + A+ ++ R+RRFGGL K
Sbjct: 195 TSGEQRLSNFLMWQAAYSELVFVPQHWPDFDKAALEGAIAEFGRRERRFGGLVAK 249
>gi|154248355|ref|YP_001419313.1| undecaprenyl diphosphate synthase [Xanthobacter autotrophicus Py2]
gi|154162440|gb|ABS69656.1| undecaprenyl diphosphate synthase [Xanthobacter autotrophicus Py2]
Length = 255
Score = 268 bits (686), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 126/242 (52%), Positives = 170/242 (70%), Gaps = 3/242 (1%)
Query: 3 ASMMSSSP---PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
A++ SP P H+G+IMDGNGRWA +R LPR GHR+G+E V AA EVGI+ LT
Sbjct: 10 ATVTERSPAVVPVHVGVIMDGNGRWATSRKLPRVEGHRRGVEALRRCVRAAREVGIRFLT 69
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
I++FS NW RP++E+ EL+ L+K FL+ L +N++V+VIG R +L DI +L +
Sbjct: 70 IYSFSSENWSRPLTEVRELMGLLKLFLRHDLADLHADNVRVKVIGERDNLAPDIRQLLVD 129
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV 179
AE T NTGL L +AFNY SR EI+ A+ I D+ +G V DVD +I++ L+T+ +
Sbjct: 130 AEALTCNNTGLTLVVAFNYGSRQEIAAAVSRIAADVAAGRVRPQDVDVDMISQRLETAGI 189
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDPDLI+RT GE+RLS+FLLWQ AYSEFVF+P YWPDF + A+++Y RDRRFGG+
Sbjct: 190 PDPDLIVRTSGEQRLSNFLLWQAAYSEFVFLPIYWPDFDKAALLAAIDEYARRDRRFGGV 249
Query: 240 SK 241
+K
Sbjct: 250 TK 251
>gi|92117245|ref|YP_576974.1| undecaprenyl diphosphate synthase [Nitrobacter hamburgensis X14]
gi|91800139|gb|ABE62514.1| Undecaprenyl pyrophosphate synthetase [Nitrobacter hamburgensis
X14]
Length = 252
Score = 268 bits (686), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 119/232 (51%), Positives = 163/232 (70%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWAA+RGLPR GHR+G+E +V AA E+GI+ LTIF+FS NW R
Sbjct: 18 PPHVAIIMDGNGRWAASRGLPRAEGHRRGVEALRRVVRAAHELGIQYLTIFSFSSENWSR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +EI +L L++ F++ SL ++ ++VRVIG R L+ DI +L EAE+ TR NT L
Sbjct: 78 PATEIGDLFGLLRRFIRNDLASLHRDGVRVRVIGERAGLEPDICALLGEAEELTRDNTSL 137
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +AFNY SR EI+ A + + +++ G +++ + +YLD D+PDPDLIIRT G
Sbjct: 138 TLVVAFNYGSRQEIANAAQQLAREVADGKRDPATINADALGQYLDAPDIPDPDLIIRTSG 197
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+RLS+FL+WQ AYSEFVF+P +WPDF + A+ +Y R+RRFGGL+ K
Sbjct: 198 EQRLSNFLMWQAAYSEFVFVPMHWPDFDKSALEGAIAEYARRERRFGGLAAK 249
>gi|85716992|ref|ZP_01047955.1| di-trans-poly-cis-decaprenylcistransferase [Nitrobacter sp.
Nb-311A]
gi|85696194|gb|EAQ34089.1| di-trans-poly-cis-decaprenylcistransferase [Nitrobacter sp.
Nb-311A]
Length = 252
Score = 267 bits (683), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 122/233 (52%), Positives = 163/233 (69%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWAAARGLPR GHR+G+E +V AA E+ I LTIF+FS NW R
Sbjct: 18 PLHVAIIMDGNGRWAAARGLPRAEGHRRGVEALRRVVRAAGELNILYLTIFSFSSENWSR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SEI++L L++ F++ +L ++ ++VRVIG R L+ DI +L EAED TR N+ L
Sbjct: 78 PRSEINDLFGLLRRFVRNDLATLHRDGVRVRVIGERAGLEPDICALLTEAEDLTRNNSRL 137
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL +AFNY SR EI+ A + + +++ G +D+ + +YLD D+PDPDLIIRT G
Sbjct: 138 NLVVAFNYGSRHEIASAAQRLAREVADGKRDPATIDADTLGRYLDAPDIPDPDLIIRTSG 197
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
E+RLS+FL+WQ AYSEFVF+P +WPDF R A+ +Y R+RRFGGL+ K
Sbjct: 198 EQRLSNFLMWQAAYSEFVFVPMHWPDFDRAALEGAIAEYARRERRFGGLAAKA 250
>gi|316933925|ref|YP_004108907.1| undecaprenyl diphosphate synthase [Rhodopseudomonas palustris DX-1]
gi|315601639|gb|ADU44174.1| undecaprenyl diphosphate synthase [Rhodopseudomonas palustris DX-1]
Length = 252
Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 119/235 (50%), Positives = 166/235 (70%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
SS P H+ IIMDGNGRWAAARGLPR GHR+G+E +V A++E+GI+ LTIF+FS N
Sbjct: 15 SSAPAHVAIIMDGNGRWAAARGLPRAEGHRRGVEALRRVVRASSELGIQYLTIFSFSSEN 74
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP +EI +L L++ F++ SL ++ +++RVIG R L D+ +L EA++ TR N
Sbjct: 75 WSRPATEIGDLFGLLRRFIRNDLASLHRDGVRIRVIGERNRLAPDLCQLLDEAQELTRNN 134
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T LNL +AFNY SR EI+ A + + +++ G +D + + +YLD D+PDPDLIIR
Sbjct: 135 TKLNLVVAFNYGSRQEIANAAQRLAREVAEGKRDPESIDIATLGRYLDAPDIPDPDLIIR 194
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
T GE+RLS+FL+WQ AYSE VF+P +WPDF + A+ +Y+ R+RRFGGL+ K
Sbjct: 195 TSGEQRLSNFLMWQAAYSELVFVPIHWPDFDKAALEGAIAEYSRRERRFGGLAAK 249
>gi|182677296|ref|YP_001831442.1| undecaprenyl diphosphate synthase [Beijerinckia indica subsp.
indica ATCC 9039]
gi|182633179|gb|ACB93953.1| undecaprenyl diphosphate synthase [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 266
Score = 266 bits (680), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 117/230 (50%), Positives = 163/230 (70%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+G+IMDGNGRWAAARGLPR GHR+G+E V AA + G+ LT+++FS+ NW R
Sbjct: 23 PAHVGVIMDGNGRWAAARGLPRLEGHRRGVEALRATVRAALDFGLDYLTVYSFSVENWSR 82
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P+ E+++L+ L+K F++ L K +++V++IG R L DI +L EAED TR N L
Sbjct: 83 PIEEVTDLMGLLKRFIRHDLRDLHKAHVRVKIIGAREPLQPDIRALLDEAEDLTRDNDRL 142
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +AFNY SR EI+ A + I + G + D++ L A YLDT+ +PDPDLIIRT G
Sbjct: 143 TLVVAFNYGSRQEIAGAARAIAHKVAEGLLQPEDINEHLFASYLDTAGIPDPDLIIRTSG 202
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E+RLS+FL+WQ AY+EFVF+P +WPDF+++ F AL ++ R+RRFGG+S
Sbjct: 203 EQRLSNFLMWQAAYAEFVFLPMHWPDFNQQAFAAALTEFATRERRFGGVS 252
>gi|75676046|ref|YP_318467.1| di-trans-poly-cis-decaprenylcistransferase [Nitrobacter
winogradskyi Nb-255]
gi|74420916|gb|ABA05115.1| Undecaprenyl pyrophosphate synthetase [Nitrobacter winogradskyi
Nb-255]
Length = 252
Score = 266 bits (679), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 121/233 (51%), Positives = 163/233 (69%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWAAARGLPR GHR+G+E +V AA E+ I LTIF+FS NW R
Sbjct: 18 PLHVAIIMDGNGRWAAARGLPRAEGHRRGVEALRRVVRAAGELNILYLTIFSFSSENWSR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SEIS+L L++ F++ +L ++ ++VRVIG R L+ DI +L EAE+ T+ N L
Sbjct: 78 PPSEISDLFGLLRRFVRNDLATLHRDGVRVRVIGERDGLEPDISALLTEAEELTKNNNRL 137
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL +AFNY SR EI++A + + +++ G +D+ + +YLD D+PDPDLIIRT G
Sbjct: 138 NLVVAFNYGSRQEIAKAARRLAREVAEGKRDPATIDADTLGRYLDAPDIPDPDLIIRTSG 197
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
E+RLS+FL+WQ AYSEFVF+P +WPDF R A+ +Y R+RRFGGL+ K
Sbjct: 198 EQRLSNFLMWQAAYSEFVFVPIHWPDFDRTALEGAIAEYARRERRFGGLAAKA 250
>gi|90423940|ref|YP_532310.1| undecaprenyl diphosphate synthase [Rhodopseudomonas palustris
BisB18]
gi|90105954|gb|ABD87991.1| Undecaprenyl pyrophosphate synthetase [Rhodopseudomonas palustris
BisB18]
Length = 252
Score = 265 bits (678), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 121/236 (51%), Positives = 164/236 (69%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
SS P H+ IIMDGNGRWAAARGLPR GHR+G++ +V AA E+GI LTIF+FS
Sbjct: 14 SSEVPVHVAIIMDGNGRWAAARGLPRAEGHRRGVDALRRVVRAANELGIAYLTIFSFSSE 73
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP SEI +L L++ F++ +L ++ ++VRVIG R L+ D+ +L EAE+ TR
Sbjct: 74 NWSRPASEIGDLFGLLRRFIRNDLATLHRDGVRVRVIGERDGLESDLCALLTEAEELTRN 133
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NT LNL +AFNY SR EI+ A + + +++ G +D +++YLD D+PDPDLII
Sbjct: 134 NTRLNLVVAFNYGSRQEIANAAQRLAREVAEGKRDPASIDPDSLSQYLDAPDIPDPDLII 193
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE+RLS+FL+WQ AYSE VF+P +WPDF + A+ +Y R+RRFGGL+ K
Sbjct: 194 RTSGEQRLSNFLMWQAAYSELVFVPIHWPDFDKAALEGAIAEYARRERRFGGLAAK 249
>gi|148255866|ref|YP_001240451.1| undecaprenyl pyrophosphate synthase [Bradyrhizobium sp. BTAi1]
gi|146408039|gb|ABQ36545.1| Undecaprenyl pyrophosphate synthetase [Bradyrhizobium sp. BTAi1]
Length = 251
Score = 265 bits (678), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 120/235 (51%), Positives = 162/235 (68%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P H+ IIMDGNGRWAAARGLPR GHR+G+E +V A+ E+GI+ LTIF+FS N
Sbjct: 14 SDGPAHVAIIMDGNGRWAAARGLPRAEGHRRGVEALRRVVRASHELGIRYLTIFSFSSEN 73
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP SEI +L L++ F++ +L ++ ++VRVIG R L+ DI +L EAE+ TR N
Sbjct: 74 WSRPASEIGDLFGLLRRFIRNDLATLHRDGVRVRVIGERDGLEPDICALLSEAEELTRGN 133
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T L L +AFNY SR EI+RA + + +++ G +D+ I +LD D+PDPDLIIR
Sbjct: 134 TKLTLVVAFNYGSRQEIARAAQRLAREVAEGRRDPASIDADAIGAHLDAPDIPDPDLIIR 193
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
T GE+RLS+FL+WQ AYSE VF+P +WPDF + A+ ++ R+RRFGGL K
Sbjct: 194 TSGEQRLSNFLMWQAAYSELVFVPMHWPDFDKAALEGAIAEFGRRERRFGGLVAK 248
>gi|91977323|ref|YP_569982.1| undecaprenyl diphosphate synthase [Rhodopseudomonas palustris
BisB5]
gi|91683779|gb|ABE40081.1| Undecaprenyl pyrophosphate synthetase [Rhodopseudomonas palustris
BisB5]
Length = 252
Score = 265 bits (677), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 119/232 (51%), Positives = 162/232 (69%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWAAARGLPR GHR+G+E +V AA E+GI+ LTIF+FS NW R
Sbjct: 18 PAHVAIIMDGNGRWAAARGLPRAEGHRRGVEALRRVVRAANEIGIQYLTIFSFSSENWAR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +EI +L L++ F++ SL ++ ++VRVIG R LD D+ +L EA++ T+ NT L
Sbjct: 78 PATEIGDLFGLLRRFIRNDLASLHRDGVRVRVIGERDRLDRDLCAMLDEAQELTQNNTKL 137
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL +AFNY SR EI+ A + + +++ G +D + +YLD D+PDPDLIIRT G
Sbjct: 138 NLVVAFNYGSRQEIANAAQRLAREVAEGKRDPATIDIETLGRYLDAPDIPDPDLIIRTSG 197
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+RLS+FL+WQ AYSE VF+P +WPDF + A+ +Y R+RRFGGL+ K
Sbjct: 198 EQRLSNFLMWQAAYSELVFVPIHWPDFDKAALEGAIAEYARRERRFGGLAAK 249
>gi|23502036|ref|NP_698163.1| undecaprenyl pyrophosphate synthase [Brucella suis 1330]
gi|161619109|ref|YP_001592996.1| undecaprenyl diphosphate synthase [Brucella canis ATCC 23365]
gi|254704444|ref|ZP_05166272.1| undecaprenyl diphosphate synthase [Brucella suis bv. 3 str. 686]
gi|260566309|ref|ZP_05836779.1| undecaprenyl pyrophosphate synthetase [Brucella suis bv. 4 str. 40]
gi|261755122|ref|ZP_05998831.1| undecaprenyl pyrophosphate synthetase [Brucella suis bv. 3 str.
686]
gi|42559822|sp|Q8G0D9|UPPS_BRUSU RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|23347990|gb|AAN30078.1| undecaprenyl diphosphate synthase [Brucella suis 1330]
gi|161335920|gb|ABX62225.1| undecaprenyl diphosphate synthase [Brucella canis ATCC 23365]
gi|260155827|gb|EEW90907.1| undecaprenyl pyrophosphate synthetase [Brucella suis bv. 4 str. 40]
gi|261744875|gb|EEY32801.1| undecaprenyl pyrophosphate synthetase [Brucella suis bv. 3 str.
686]
Length = 254
Score = 264 bits (675), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 124/235 (52%), Positives = 162/235 (68%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P HI IIMDGNGRWA ARGLPR AGHR G+E EIV AA + G+ LT+FAFS NW
Sbjct: 2 SDPRHIAIIMDGNGRWAKARGLPRSAGHRAGVEALREIVRAAGDRGLGYLTLFAFSSENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+S+L+ L+K F+++ L +NN++V +IG R L DI +L EAE T NT
Sbjct: 62 TRPSGEVSDLLGLLKLFIRRDLAELHRNNVRVNIIGERAELAADIRALLNEAESLTHRNT 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GLNL IAFNY SRDEI RA++++ +D+ +G + + + L++ LDT+ +PDPDLIIRT
Sbjct: 122 GLNLVIAFNYGSRDEIVRAVRSLARDVAAGLLDPSSISAELVSANLDTAGIPDPDLIIRT 181
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
GE RLS+FLLWQ AYSEF+F+P +WPDF A + R+RRFGG+ +
Sbjct: 182 SGEMRLSNFLLWQAAYSEFLFLPCHWPDFRPTDLDAAYETFRQRERRFGGVEPRA 236
>gi|254719220|ref|ZP_05181031.1| undecaprenyl diphosphate synthase [Brucella sp. 83/13]
gi|265984215|ref|ZP_06096950.1| undecaprenyl pyrophosphate synthetase [Brucella sp. 83/13]
gi|306837969|ref|ZP_07470827.1| undecaprenyl diphosphate synthase [Brucella sp. NF 2653]
gi|264662807|gb|EEZ33068.1| undecaprenyl pyrophosphate synthetase [Brucella sp. 83/13]
gi|306406893|gb|EFM63114.1| undecaprenyl diphosphate synthase [Brucella sp. NF 2653]
Length = 254
Score = 264 bits (675), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 124/235 (52%), Positives = 162/235 (68%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P HI IIMDGNGRWA ARGLPR AGHR G+E EIV AA + G+ LT+FAFS NW
Sbjct: 2 SDPRHIAIIMDGNGRWAKARGLPRSAGHRAGVETLREIVRAAGDRGLGYLTLFAFSSENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+S+L+ L+K F+++ L +NN++V +IG R L DI +L EAE T NT
Sbjct: 62 TRPSGEVSDLLGLLKLFIRRDLAELHRNNVRVNIIGERAELAADIRALLNEAESLTHRNT 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GLNL IAFNY SRDEI RA++++ +D+ +G + + + L++ LDT+ +PDPDLIIRT
Sbjct: 122 GLNLVIAFNYGSRDEIVRAVRSLARDVAAGLLDPSSISAELVSANLDTAGIPDPDLIIRT 181
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
GE RLS+FLLWQ AYSEF+F+P +WPDF A + R+RRFGG+ +
Sbjct: 182 SGEMRLSNFLLWQAAYSEFLFLPCHWPDFRPADLDAAYETFRQRERRFGGVEPRA 236
>gi|163843422|ref|YP_001627826.1| undecaprenyl diphosphate synthase [Brucella suis ATCC 23445]
gi|225627626|ref|ZP_03785663.1| undecaprenyl diphosphate synthase [Brucella ceti str. Cudo]
gi|254701899|ref|ZP_05163727.1| undecaprenyl diphosphate synthase [Brucella suis bv. 5 str. 513]
gi|254706660|ref|ZP_05168488.1| undecaprenyl diphosphate synthase [Brucella pinnipedialis
M163/99/10]
gi|254710232|ref|ZP_05172043.1| undecaprenyl diphosphate synthase [Brucella pinnipedialis B2/94]
gi|254714228|ref|ZP_05176039.1| undecaprenyl diphosphate synthase [Brucella ceti M644/93/1]
gi|254717664|ref|ZP_05179475.1| undecaprenyl diphosphate synthase [Brucella ceti M13/05/1]
gi|256031726|ref|ZP_05445340.1| undecaprenyl diphosphate synthase [Brucella pinnipedialis
M292/94/1]
gi|256061239|ref|ZP_05451390.1| undecaprenyl diphosphate synthase [Brucella neotomae 5K33]
gi|256159892|ref|ZP_05457614.1| undecaprenyl diphosphate synthase [Brucella ceti M490/95/1]
gi|256255126|ref|ZP_05460662.1| undecaprenyl diphosphate synthase [Brucella ceti B1/94]
gi|256369583|ref|YP_003107093.1| undecaprenyl diphosphate synthase [Brucella microti CCM 4915]
gi|260168859|ref|ZP_05755670.1| undecaprenyl diphosphate synthase [Brucella sp. F5/99]
gi|261219505|ref|ZP_05933786.1| undecaprenyl pyrophosphate synthetase [Brucella ceti M13/05/1]
gi|261222324|ref|ZP_05936605.1| undecaprenyl pyrophosphate synthetase [Brucella ceti B1/94]
gi|261314120|ref|ZP_05953317.1| undecaprenyl pyrophosphate synthetase [Brucella pinnipedialis
M163/99/10]
gi|261317791|ref|ZP_05956988.1| undecaprenyl pyrophosphate synthetase [Brucella pinnipedialis
B2/94]
gi|261322000|ref|ZP_05961197.1| undecaprenyl pyrophosphate synthetase [Brucella ceti M644/93/1]
gi|261325247|ref|ZP_05964444.1| undecaprenyl pyrophosphate synthetase [Brucella neotomae 5K33]
gi|261752463|ref|ZP_05996172.1| undecaprenyl pyrophosphate synthetase [Brucella suis bv. 5 str.
513]
gi|261758347|ref|ZP_06002056.1| undecaprenyl pyrophosphate synthetase [Brucella sp. F5/99]
gi|265988822|ref|ZP_06101379.1| undecaprenyl pyrophosphate synthetase [Brucella pinnipedialis
M292/94/1]
gi|265998288|ref|ZP_06110845.1| undecaprenyl pyrophosphate synthetase [Brucella ceti M490/95/1]
gi|163674145|gb|ABY38256.1| undecaprenyl diphosphate synthase [Brucella suis ATCC 23445]
gi|225617631|gb|EEH14676.1| undecaprenyl diphosphate synthase [Brucella ceti str. Cudo]
gi|255999745|gb|ACU48144.1| undecaprenyl diphosphate synthase [Brucella microti CCM 4915]
gi|260920908|gb|EEX87561.1| undecaprenyl pyrophosphate synthetase [Brucella ceti B1/94]
gi|260924594|gb|EEX91162.1| undecaprenyl pyrophosphate synthetase [Brucella ceti M13/05/1]
gi|261294690|gb|EEX98186.1| undecaprenyl pyrophosphate synthetase [Brucella ceti M644/93/1]
gi|261297014|gb|EEY00511.1| undecaprenyl pyrophosphate synthetase [Brucella pinnipedialis
B2/94]
gi|261301227|gb|EEY04724.1| undecaprenyl pyrophosphate synthetase [Brucella neotomae 5K33]
gi|261303146|gb|EEY06643.1| undecaprenyl pyrophosphate synthetase [Brucella pinnipedialis
M163/99/10]
gi|261738331|gb|EEY26327.1| undecaprenyl pyrophosphate synthetase [Brucella sp. F5/99]
gi|261742216|gb|EEY30142.1| undecaprenyl pyrophosphate synthetase [Brucella suis bv. 5 str.
513]
gi|262552756|gb|EEZ08746.1| undecaprenyl pyrophosphate synthetase [Brucella ceti M490/95/1]
gi|264661019|gb|EEZ31280.1| undecaprenyl pyrophosphate synthetase [Brucella pinnipedialis
M292/94/1]
Length = 254
Score = 264 bits (675), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 124/235 (52%), Positives = 162/235 (68%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P HI IIMDGNGRWA ARGLPR AGHR G+E EIV AA + G+ LT+FAFS NW
Sbjct: 2 SDPRHIAIIMDGNGRWAKARGLPRSAGHRAGVEALREIVRAAGDRGLGYLTLFAFSSENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+S+L+ L+K F+++ L +NN++V +IG R L DI +L EAE T NT
Sbjct: 62 TRPSGEVSDLLGLLKLFIRRDLAELHRNNVRVNIIGERAELAADIRALLNEAESLTHRNT 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GLNL IAFNY SRDEI RA++++ +D+ +G + + + L++ LDT+ +PDPDLIIRT
Sbjct: 122 GLNLVIAFNYGSRDEIVRAVRSLARDVAAGLLDPSSISAELVSANLDTAGIPDPDLIIRT 181
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
GE RLS+FLLWQ AYSEF+F+P +WPDF A + R+RRFGG+ +
Sbjct: 182 SGEMRLSNFLLWQAAYSEFLFLPCHWPDFRPADLDAAYETFRQRERRFGGVEPRA 236
>gi|86749941|ref|YP_486437.1| undecaprenyl diphosphate synthase [Rhodopseudomonas palustris HaA2]
gi|86572969|gb|ABD07526.1| Undecaprenyl pyrophosphate synthetase [Rhodopseudomonas palustris
HaA2]
Length = 252
Score = 264 bits (674), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 119/232 (51%), Positives = 162/232 (69%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWAAARGLPR GHR+G+E +V AA ++GI+ LTIF+FS NW R
Sbjct: 18 PAHVAIIMDGNGRWAAARGLPRAEGHRRGVEALRRVVRAANDIGIQYLTIFSFSSENWTR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SEI +L L++ F++ SL ++ ++VRVIG R L+ D+ +L EA++ TR NT L
Sbjct: 78 PKSEIGDLFGLLRRFIRNDLASLHRDGVRVRVIGERDRLERDLCAMLDEAQELTRDNTKL 137
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL +AFNY SR EI+ A + + +++ G +D + +YLD D+PDPDLIIRT G
Sbjct: 138 NLVVAFNYGSRQEIANAAQRLAREVAEGKRDPATIDIETLGRYLDAPDIPDPDLIIRTSG 197
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+RLS+FL+WQ AYSE VF+P +WPDF + A+ +Y R+RRFGGL+ K
Sbjct: 198 EQRLSNFLMWQAAYSELVFVPIHWPDFDKAALEGAIAEYARRERRFGGLAAK 249
>gi|90419596|ref|ZP_01227506.1| undecaprenyl pyrophosphate synthetase [Aurantimonas manganoxydans
SI85-9A1]
gi|90336533|gb|EAS50274.1| undecaprenyl pyrophosphate synthetase [Aurantimonas manganoxydans
SI85-9A1]
Length = 238
Score = 264 bits (674), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 122/230 (53%), Positives = 163/230 (70%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA ARGLPR GHR+G+E E V AA E+GI+ LT+FAFS NWRRP
Sbjct: 6 HVAIIMDGNGRWANARGLPRSMGHRRGVEAVREAVRAAGELGIQYLTLFAFSSENWRRPE 65
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+E+ EL+ L+K F+++ L K ++VRVIG R +L DI +L+EAE+ TR N L
Sbjct: 66 AEVEELMGLLKHFIRRDLAELHKEGVRVRVIGERENLSSDIRALLEEAENLTRDNQRQTL 125
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+AFNY +RDE++RA++ + +G V + + + ++LDT+ +PDPDLIIRT GE
Sbjct: 126 VVAFNYGARDEVARAMRRVAAKYAAGEVELEGLTAEYLDEHLDTAGIPDPDLIIRTSGEL 185
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RLS+FLLWQ AYSEFVF+P WPDF R+ F A+ Y RDRR+GGLS++
Sbjct: 186 RLSNFLLWQAAYSEFVFLPCLWPDFDRKAFEEAIADYFSRDRRYGGLSRE 235
>gi|163760887|ref|ZP_02167966.1| undecaprenyl pyrophosphate synthase [Hoeflea phototrophica DFL-43]
gi|162281931|gb|EDQ32223.1| undecaprenyl pyrophosphate synthase [Hoeflea phototrophica DFL-43]
Length = 248
Score = 263 bits (673), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 122/236 (51%), Positives = 166/236 (70%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P H+ IIMDGNGRWA ARGL R AGHR G+E E V A E I+ LT+FAFS N
Sbjct: 7 SKTPRHVAIIMDGNGRWAGARGLARTAGHRAGVERVREAVRTAHEANIEYLTLFAFSSEN 66
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP E+S+L+ ++K F++K L + N+ V+VIG R SL DI +L EAED+TR N
Sbjct: 67 WNRPEEEVSDLMGILKYFIRKDLAELHRENVCVKVIGCRQSLKPDIRGLLDEAEDRTRGN 126
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
TG+ L IAFNY SR+E+ RA + I + +++G + ++ ++ ++DT+ +PDPDL+IR
Sbjct: 127 TGVTLVIAFNYGSRNELVRATRLIAEAVQAGQLDPCSINEHSLSAFVDTAGIPDPDLVIR 186
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
T GE+RLS+FLLWQ AYSEFVF+P WPDF R+ F +AL++Y+ RDRRFG + +
Sbjct: 187 TSGEQRLSNFLLWQAAYSEFVFLPCLWPDFDRQAFLNALDEYSRRDRRFGAIPARA 242
>gi|256113718|ref|ZP_05454522.1| undecaprenyl diphosphate synthase [Brucella melitensis bv. 3 str.
Ether]
gi|265995073|ref|ZP_06107630.1| undecaprenyl pyrophosphate synthetase [Brucella melitensis bv. 3
str. Ether]
gi|262766186|gb|EEZ11975.1| undecaprenyl pyrophosphate synthetase [Brucella melitensis bv. 3
str. Ether]
Length = 254
Score = 263 bits (672), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 123/235 (52%), Positives = 163/235 (69%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P HI IIMDGNGRWA ARGLPR AGHR G+E EIV AA + G+ LT+FAFS NW
Sbjct: 2 SDPRHIAIIMDGNGRWAKARGLPRSAGHRAGVEALREIVRAAGDRGLGYLTLFAFSSENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+S+L+ L+K F+++ L +NN++V +IG R L +I +L EAE T+ NT
Sbjct: 62 TRPSGEVSDLLGLLKLFIRRDLAELHRNNVRVNIIGERAELAANIRALLNEAESLTQRNT 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GLNL IAFNY SRDEI RA++++ +D+ +G + + + L++ LDT+ +PDPDLIIRT
Sbjct: 122 GLNLVIAFNYGSRDEIVRAVRSLARDVAAGLLDPSSISAELVSANLDTAGIPDPDLIIRT 181
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
GE RLS+FLLWQ AYSEF+F+P +WPDF A + R+RRFGG+ +
Sbjct: 182 SGEMRLSNFLLWQAAYSEFLFLPCHWPDFRPADLDAAYETFRQRERRFGGVEPRA 236
>gi|39935983|ref|NP_948259.1| undecaprenyl pyrophosphate synthase [Rhodopseudomonas palustris
CGA009]
gi|192291636|ref|YP_001992241.1| undecaprenyl pyrophosphate synthase [Rhodopseudomonas palustris
TIE-1]
gi|39649837|emb|CAE28359.1| undecaprenyl pyrophosphate synthetase [Rhodopseudomonas palustris
CGA009]
gi|192285385|gb|ACF01766.1| undecaprenyl diphosphate synthase [Rhodopseudomonas palustris
TIE-1]
Length = 252
Score = 263 bits (671), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 117/230 (50%), Positives = 163/230 (70%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWAAARGLPR GHR+G+E +V A++E+GI+ LTIF+FS NW RP
Sbjct: 20 HVAIIMDGNGRWAAARGLPRAEGHRRGVEALRRVVRASSELGIQYLTIFSFSSENWARPA 79
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+EI +L L++ F++ SL ++ +++RVIG R LD D+ +L EA++ TR NT LNL
Sbjct: 80 TEIVDLFGLLRRFIRNDLASLHRDGVRIRVIGERDRLDRDLCAMLDEAQELTRNNTKLNL 139
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+AFNY SR EI+ A + + +++ G +D + +YLD D+PDPDLIIRT GE+
Sbjct: 140 VVAFNYGSRQEIANAAQRLAREVAEGKRDPATIDIETLGRYLDAPDIPDPDLIIRTSGEQ 199
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RLS+FL+WQ AYSE VF+P +WPDF + A+ +Y+ R+RRFGGL+ K
Sbjct: 200 RLSNFLMWQAAYSELVFVPIHWPDFDKAALEGAIAEYSRRERRFGGLAAK 249
>gi|17987110|ref|NP_539744.1| undecaprenyl pyrophosphate synthase [Brucella melitensis bv. 1 str.
16M]
gi|62290071|ref|YP_221864.1| undecaprenyl pyrophosphate synthase [Brucella abortus bv. 1 str.
9-941]
gi|82699997|ref|YP_414571.1| undecaprenyl pyrophosphate synthase [Brucella melitensis biovar
Abortus 2308]
gi|148559779|ref|YP_001259076.1| undecaprenyl pyrophosphate synthase [Brucella ovis ATCC 25840]
gi|189024310|ref|YP_001935078.1| undecaprenyl pyrophosphate synthase [Brucella abortus S19]
gi|225852655|ref|YP_002732888.1| undecaprenyl pyrophosphate synthase [Brucella melitensis ATCC
23457]
gi|237815577|ref|ZP_04594574.1| undecaprenyl diphosphate synthase [Brucella abortus str. 2308 A]
gi|254689381|ref|ZP_05152635.1| undecaprenyl diphosphate synthase [Brucella abortus bv. 6 str. 870]
gi|254693865|ref|ZP_05155693.1| undecaprenyl diphosphate synthase [Brucella abortus bv. 3 str.
Tulya]
gi|254697516|ref|ZP_05159344.1| undecaprenyl diphosphate synthase [Brucella abortus bv. 2 str.
86/8/59]
gi|254730411|ref|ZP_05188989.1| undecaprenyl diphosphate synthase [Brucella abortus bv. 4 str. 292]
gi|256044813|ref|ZP_05447717.1| undecaprenyl diphosphate synthase [Brucella melitensis bv. 1 str.
Rev.1]
gi|256257627|ref|ZP_05463163.1| undecaprenyl diphosphate synthase [Brucella abortus bv. 9 str. C68]
gi|256263851|ref|ZP_05466383.1| undecaprenyl pyrophosphate synthetase [Brucella melitensis bv. 2
str. 63/9]
gi|260546621|ref|ZP_05822360.1| undecaprenyl pyrophosphate synthetase [Brucella abortus NCTC 8038]
gi|260565587|ref|ZP_05836071.1| undecaprenyl pyrophosphate synthetase [Brucella melitensis bv. 1
str. 16M]
gi|260754899|ref|ZP_05867247.1| undecaprenyl diphosphate synthase [Brucella abortus bv. 6 str. 870]
gi|260758116|ref|ZP_05870464.1| undecaprenyl diphosphate synthase [Brucella abortus bv. 4 str. 292]
gi|260761942|ref|ZP_05874285.1| undecaprenyl diphosphate synthase [Brucella abortus bv. 2 str.
86/8/59]
gi|260883911|ref|ZP_05895525.1| undecaprenyl pyrophosphate synthetase [Brucella abortus bv. 9 str.
C68]
gi|261214151|ref|ZP_05928432.1| undecaprenyl diphosphate synthase [Brucella abortus bv. 3 str.
Tulya]
gi|265991237|ref|ZP_06103794.1| undecaprenyl pyrophosphate synthetase [Brucella melitensis bv. 1
str. Rev.1]
gi|42559851|sp|Q8YHH3|UPPS_BRUME RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|73920255|sp|Q57CY1|UPPS_BRUAB RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|17982771|gb|AAL52008.1| undecaprenyl pyrophosphate synthetase [Brucella melitensis bv. 1
str. 16M]
gi|62196203|gb|AAX74503.1| UppS, undecaprenyl diphosphate synthase [Brucella abortus bv. 1
str. 9-941]
gi|82616098|emb|CAJ11136.1| RNA-binding region RNP-1 (RNA recognition
motif):Di-trans-poly-cis-decaprenylcistransferase
[Brucella melitensis biovar Abortus 2308]
gi|148371036|gb|ABQ61015.1| undecaprenyl diphosphate synthase [Brucella ovis ATCC 25840]
gi|189019882|gb|ACD72604.1| Di-trans-poly-cis-decaprenylcistransferase [Brucella abortus S19]
gi|225641020|gb|ACO00934.1| undecaprenyl diphosphate synthase [Brucella melitensis ATCC 23457]
gi|237788875|gb|EEP63086.1| undecaprenyl diphosphate synthase [Brucella abortus str. 2308 A]
gi|260095671|gb|EEW79548.1| undecaprenyl pyrophosphate synthetase [Brucella abortus NCTC 8038]
gi|260151655|gb|EEW86749.1| undecaprenyl pyrophosphate synthetase [Brucella melitensis bv. 1
str. 16M]
gi|260668434|gb|EEX55374.1| undecaprenyl diphosphate synthase [Brucella abortus bv. 4 str. 292]
gi|260672374|gb|EEX59195.1| undecaprenyl diphosphate synthase [Brucella abortus bv. 2 str.
86/8/59]
gi|260675007|gb|EEX61828.1| undecaprenyl diphosphate synthase [Brucella abortus bv. 6 str. 870]
gi|260873439|gb|EEX80508.1| undecaprenyl pyrophosphate synthetase [Brucella abortus bv. 9 str.
C68]
gi|260915758|gb|EEX82619.1| undecaprenyl diphosphate synthase [Brucella abortus bv. 3 str.
Tulya]
gi|263002021|gb|EEZ14596.1| undecaprenyl pyrophosphate synthetase [Brucella melitensis bv. 1
str. Rev.1]
gi|263093982|gb|EEZ17916.1| undecaprenyl pyrophosphate synthetase [Brucella melitensis bv. 2
str. 63/9]
gi|326409176|gb|ADZ66241.1| Di-trans-poly-cis-decaprenylcistransferase [Brucella melitensis
M28]
gi|326538886|gb|ADZ87101.1| undecaprenyl diphosphate synthase [Brucella melitensis M5-90]
Length = 254
Score = 262 bits (670), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 123/235 (52%), Positives = 162/235 (68%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P HI IIMDGNGRWA ARGLPR AGHR G+E EIV AA + G+ LT+FAFS NW
Sbjct: 2 SDPRHIAIIMDGNGRWAKARGLPRSAGHRAGVEALREIVRAAGDRGLGYLTLFAFSSENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+S+L+ L+K F+++ L +NN++V +IG R L +I +L EAE T NT
Sbjct: 62 TRPSGEVSDLLGLLKLFIRRDLAELHRNNVRVNIIGERAELAANIRALLNEAESLTHRNT 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GLNL IAFNY SRDEI RA++++ +D+ +G + + + L++ LDT+ +PDPDLIIRT
Sbjct: 122 GLNLVIAFNYGSRDEIVRAVRSLARDVAAGLLDPSSISAELVSANLDTAGIPDPDLIIRT 181
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
GE RLS+FLLWQ AYSEF+F+P +WPDF A + R+RRFGG+ +
Sbjct: 182 SGEMRLSNFLLWQAAYSEFLFLPCHWPDFRPADLDAAYETFRQRERRFGGVEPRA 236
>gi|27379968|ref|NP_771497.1| undecaprenyl pyrophosphate synthase [Bradyrhizobium japonicum USDA
110]
gi|42559965|sp|Q89KP7|UPPS2_BRAJA RecName: Full=Undecaprenyl pyrophosphate synthase 2; Short=UPP
synthase 2; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase 2;
AltName: Full=Undecaprenyl diphosphate synthase 2;
Short=UDS 2
gi|27353121|dbj|BAC50122.1| undecaprenyl pyrophosphate synthase [Bradyrhizobium japonicum USDA
110]
Length = 252
Score = 262 bits (670), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 118/235 (50%), Positives = 162/235 (68%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P H+ IIMDGNGRWAAARGLPR GHR+G+E +V A+ E+GI+ LTIF+FS N
Sbjct: 15 SDAPAHVAIIMDGNGRWAAARGLPRAEGHRRGVEALRRVVRASHELGIRYLTIFSFSSEN 74
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP SEI +L L++ F++ SL ++ +KVR+IG R L+ DI +L EAE+ TR N
Sbjct: 75 WSRPASEIGDLFGLLRRFIRNDLASLHRDGVKVRIIGERDGLESDICALLNEAEELTRDN 134
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+ L L +AFNY SR EI++A + + +++ G +D+ + +LD D+PDPDLIIR
Sbjct: 135 SRLTLVVAFNYGSRQEIAKAAQKLAREVAEGRRDPATIDAETLGAHLDAPDIPDPDLIIR 194
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
T GE+RLS+FL+WQ AYSE VF+P +WPDF + A+ ++ R+RRFGGL K
Sbjct: 195 TSGEQRLSNFLMWQAAYSELVFVPIHWPDFDKAALEGAIAEFARRERRFGGLVAK 249
>gi|153009363|ref|YP_001370578.1| undecaprenyl pyrophosphate synthase [Ochrobactrum anthropi ATCC
49188]
gi|151561251|gb|ABS14749.1| undecaprenyl diphosphate synthase [Ochrobactrum anthropi ATCC
49188]
Length = 255
Score = 262 bits (669), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 124/235 (52%), Positives = 162/235 (68%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P HI IIMDGNGRWA AR LPR AGHR G+E EIV AA + G+ LT+FAFS NW
Sbjct: 2 SDPRHIAIIMDGNGRWAKARNLPRSAGHRAGVEALREIVRAAGDRGLGYLTLFAFSSENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+++L+ L+K F+++ L +NN++V +IG R L DI +L EAE TR NT
Sbjct: 62 SRPSGEVNDLLGLLKIFIRRDLAELHRNNVRVSIIGEREELAADIRALLVEAETLTRRNT 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GLNL IAFNY SRDEI RA++++ +D+ +G + + S L++ LDT+ +PDPDLIIRT
Sbjct: 122 GLNLIIAFNYGSRDEIVRAVRSLARDVAAGLLDPASISSELVSANLDTAGIPDPDLIIRT 181
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
GE RLS+FLLWQ AYSEF+F+P +WPDF A + R+RRFGG+ +
Sbjct: 182 SGEMRLSNFLLWQAAYSEFLFLPIHWPDFRASDLDAAYEAFRQRERRFGGVEVRA 236
>gi|220921530|ref|YP_002496831.1| undecaprenyl diphosphate synthase [Methylobacterium nodulans ORS
2060]
gi|219946136|gb|ACL56528.1| undecaprenyl diphosphate synthase [Methylobacterium nodulans ORS
2060]
Length = 257
Score = 261 bits (668), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 116/232 (50%), Positives = 161/232 (69%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWAA RGLPR GHR+G+E V AA ++GI+ LT+++FS NWRR
Sbjct: 24 PAHVAIIMDGNGRWAARRGLPRAEGHRRGVEAVRRAVRAAIDLGIQYLTVYSFSSENWRR 83
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE+++L+ L+K F+++ L N ++VR+IG R L DDI +L+EAE++T NT L
Sbjct: 84 PASEVADLMGLLKLFVRRDLADLHANGVRVRIIGERRGLADDIAALLREAEERTAQNTRL 143
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +AFNY R EI RA++ + + ++ G + +D +A LDT +PDPDL+IRT G
Sbjct: 144 TLVVAFNYGGRQEIVRAVQAMARAVQEGRLSPEAIDLGTVAAALDTQGIPDPDLVIRTSG 203
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FL WQ AYSEFVFI + WPDF F A+ +Y R+RRFGGL+ +
Sbjct: 204 EQRVSNFLTWQTAYSEFVFIQDLWPDFDHAAFAAAVGEYQSRERRFGGLTAQ 255
>gi|209885088|ref|YP_002288945.1| di-trans,poly-cis-decaprenylcistransferase [Oligotropha
carboxidovorans OM5]
gi|209873284|gb|ACI93080.1| di-trans,poly-cis-decaprenylcistransferase [Oligotropha
carboxidovorans OM5]
Length = 252
Score = 261 bits (668), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 118/232 (50%), Positives = 158/232 (68%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWAAARGLPR GHR+G+E +++ AA E+GI LTIF+FS NW R
Sbjct: 18 PRHVAIIMDGNGRWAAARGLPRAEGHRRGVEALRKVLRAAHELGISYLTIFSFSSENWSR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE+ +L L++ F++ SL + ++VRVIG R L+ DI +L+EAE+ TR NT L
Sbjct: 78 PASEVGDLFALLRRFIRNDLASLHGDGVRVRVIGERDGLEPDIKALLEEAEELTRHNTNL 137
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +AFNY SR EI+ A + + +++ G + + + YLD D+PDPDLIIRT G
Sbjct: 138 TLVVAFNYGSRQEIAHAAQRLAREVADGKRDPATITADTLGSYLDAPDIPDPDLIIRTSG 197
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+RLS+FL+WQ AYSE VF+P WPDF + A+ +Y R+RRFGGL K
Sbjct: 198 EQRLSNFLMWQAAYSELVFVPTLWPDFDKAALEGAIAEYATRERRFGGLIAK 249
>gi|115524564|ref|YP_781475.1| undecaprenyl diphosphate synthase [Rhodopseudomonas palustris
BisA53]
gi|115518511|gb|ABJ06495.1| Undecaprenyl pyrophosphate synthetase [Rhodopseudomonas palustris
BisA53]
Length = 252
Score = 261 bits (667), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 119/236 (50%), Positives = 162/236 (68%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
SS PP H+ IIMDGNGRWA ARGLPR GHR+G++ +V A+ E+GI LTIF+FS
Sbjct: 14 SSEPPLHVAIIMDGNGRWAKARGLPRAEGHRRGVDALRRVVRASGELGILYLTIFSFSSE 73
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP SEI++L L++ F++ +L ++ ++VRVIG R L+ D+ +L EAE+ TR
Sbjct: 74 NWSRPASEITDLFGLLRRFIRNDLANLHRDGVRVRVIGERDGLEPDLCALLTEAEELTRN 133
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NT L+L +AFNY SR EI+ A + + ++ G + + YLD D+PDPDLII
Sbjct: 134 NTKLHLVVAFNYGSRKEIANAAQRLAIEVAEGKRDPASITPEALGGYLDAPDIPDPDLII 193
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE+RLS+FL+WQ AYSE VF+P +WPDF R A+ +Y+ R+RRFGGL+ K
Sbjct: 194 RTSGEQRLSNFLMWQAAYSELVFVPIHWPDFDRAALESAIAEYSRRERRFGGLAAK 249
>gi|163851509|ref|YP_001639552.1| undecaprenyl diphosphate synthase [Methylobacterium extorquens PA1]
gi|218530316|ref|YP_002421132.1| undecaprenyl diphosphate synthase [Methylobacterium
chloromethanicum CM4]
gi|240138676|ref|YP_002963148.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase)
[Methylobacterium extorquens AM1]
gi|254561272|ref|YP_003068367.1| undecaprenyl pyrophosphate synthetase [Methylobacterium extorquens
DM4]
gi|163663114|gb|ABY30481.1| undecaprenyl diphosphate synthase [Methylobacterium extorquens PA1]
gi|218522619|gb|ACK83204.1| undecaprenyl diphosphate synthase [Methylobacterium
chloromethanicum CM4]
gi|240008645|gb|ACS39871.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase)
[Methylobacterium extorquens AM1]
gi|254268550|emb|CAX24507.1| undecaprenyl pyrophosphate synthetase (di-trans,
poly-cis-decaprenylcistransferase) [Methylobacterium
extorquens DM4]
Length = 259
Score = 261 bits (666), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 119/228 (52%), Positives = 159/228 (69%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWAA+RGLPR GHR+G+E V +A +GI LTI++FS NWRRP
Sbjct: 28 HVAIIMDGNGRWAASRGLPRFEGHRRGVEAVRRAVRSAITLGIDYLTIYSFSSENWRRPP 87
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
SE+SEL+ L+K F++ L NN+++RVIG+R L DI +L EAE +TR NTGL L
Sbjct: 88 SEVSELMGLLKLFVRGDLADLHANNVRIRVIGDRADLSPDIASLLDEAEARTRANTGLTL 147
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+AFNY R EI RA++ I + G + +++ I + LDT+ +PDPDL+IRT GE+
Sbjct: 148 VVAFNYGGRQEILRAVRRIAASVAEGRLRVDEIELPTITEALDTAGIPDPDLVIRTSGEQ 207
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RLS+FL WQ AY+E+V P +WPDF F A+++Y+ RDRRFGGLS
Sbjct: 208 RLSNFLTWQTAYAEYVIEPGFWPDFDHAAFLAAVSEYHRRDRRFGGLS 255
>gi|296446142|ref|ZP_06888090.1| undecaprenyl diphosphate synthase [Methylosinus trichosporium OB3b]
gi|296256336|gb|EFH03415.1| undecaprenyl diphosphate synthase [Methylosinus trichosporium OB3b]
Length = 259
Score = 261 bits (666), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 120/242 (49%), Positives = 171/242 (70%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
A++ S P H+ +IMDGNGRWAAARGLPR GHR+G+E + V AA E+G+ LT++
Sbjct: 11 AAALAPRSAPRHVALIMDGNGRWAAARGLPRFEGHRRGVEALRKTVRAAIELGVDYLTVY 70
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
+FS+ NW RP E+ L+ L+ F++ L+ NN++VRVIG+R+ L DDI +L+EAE
Sbjct: 71 SFSVENWSRPPEEVQSLLALLHRFIRNDIGELRSNNVRVRVIGDRIDLSDDIAALLREAE 130
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ T NTGL L +AFNY +R EI+ A + + +++ +G + D+D+ I+ LDT+ +PD
Sbjct: 131 ETTAANTGLTLIVAFNYGARQEIAAAARALAEEVAAGRLRPGDIDADAISARLDTAGIPD 190
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDLIIRT GE+RLS+F+LWQ AY+E +F+P +WPDF R F A++ Y RDRRFGGL+
Sbjct: 191 PDLIIRTSGEQRLSNFMLWQAAYAELLFVPVHWPDFDRADFEAAIDDYAHRDRRFGGLAP 250
Query: 242 KG 243
G
Sbjct: 251 VG 252
>gi|299134997|ref|ZP_07028188.1| undecaprenyl diphosphate synthase [Afipia sp. 1NLS2]
gi|298589974|gb|EFI50178.1| undecaprenyl diphosphate synthase [Afipia sp. 1NLS2]
Length = 252
Score = 260 bits (665), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 120/236 (50%), Positives = 159/236 (67%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
++ P H+ IIMDGNGRWAAARGLPR GHR+G+E +++ AA E+GI LTIF+FS
Sbjct: 14 NTGSPRHVAIIMDGNGRWAAARGLPRAEGHRRGVEALRKVLRAAHELGISYLTIFSFSSE 73
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP SEI +L L++ F++ SL + + VR+IG R L+ DI +LKEAED TR
Sbjct: 74 NWSRPASEIGDLFGLLRRFIRNDLASLHSDGVCVRIIGEREGLEPDIKALLKEAEDLTRH 133
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NT L L +AFNY SR EI+ A + + ++ G + + + YLD D+PDPDLII
Sbjct: 134 NTRLTLVVAFNYGSRHEIAHAAQRLAVEVAEGKRDPATITAETLGSYLDVPDIPDPDLII 193
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE+RLS+FL+WQ AYSE VF+P +WPDF + A+ +Y R+RRFGGL K
Sbjct: 194 RTSGEQRLSNFLMWQAAYSELVFVPIHWPDFDKAALEGAIAEYATRERRFGGLIAK 249
>gi|306841881|ref|ZP_07474561.1| undecaprenyl diphosphate synthase [Brucella sp. BO2]
gi|306844022|ref|ZP_07476617.1| undecaprenyl diphosphate synthase [Brucella sp. BO1]
gi|306275777|gb|EFM57501.1| undecaprenyl diphosphate synthase [Brucella sp. BO1]
gi|306288011|gb|EFM59413.1| undecaprenyl diphosphate synthase [Brucella sp. BO2]
Length = 254
Score = 258 bits (660), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 123/235 (52%), Positives = 158/235 (67%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P HI IIMDGNGRWA ARGLPR AGHR G+E IV A + G+ LT+FAFS NW
Sbjct: 2 SDPRHIAIIMDGNGRWAKARGLPRSAGHRAGMETLRAIVRTAGDRGLGYLTLFAFSSENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+S+L+ L+K F+++ L +NN++V +IG R L DI +L EAE T NT
Sbjct: 62 TRPSGEVSDLLGLLKLFIRRDLAELHRNNVRVSIIGERAELAADIRALLNEAESLTHRNT 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GLNL IAFNY SRDEI RA+K++ +D+ +G + + + L + LDT+ +PDPDLIIRT
Sbjct: 122 GLNLVIAFNYGSRDEIVRAVKSLARDVAAGLLDPSSISAELFSANLDTAGIPDPDLIIRT 181
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
GE RLS+FLLWQ AYSEF+F+P WPDF A + R+RRFGG+ +
Sbjct: 182 SGEMRLSNFLLWQAAYSEFLFLPCLWPDFRPADLDAAYETFRQRERRFGGVEPRA 236
>gi|239832045|ref|ZP_04680374.1| undecaprenyl diphosphate synthase [Ochrobactrum intermedium LMG
3301]
gi|239824312|gb|EEQ95880.1| undecaprenyl diphosphate synthase [Ochrobactrum intermedium LMG
3301]
Length = 261
Score = 258 bits (660), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 122/235 (51%), Positives = 161/235 (68%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P HI IIMDGNGRWA AR LPR AGHR G+E E V AA + G+ LT+FAFS NW
Sbjct: 8 SEPRHIAIIMDGNGRWAKARNLPRSAGHRAGVEALRETVRAAGDRGLGYLTLFAFSSENW 67
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+++L+ L+K F+++ L +NN++V +IG R L DI +L EAE T NT
Sbjct: 68 SRPSGEVNDLLGLLKIFIRRDLAELHRNNVRVSIIGEREELAPDIRTLLVEAETLTHRNT 127
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GLNL IAFNY SRDEI RA++++ +D+ +G + + + LI+ LDT+ +PDPDLIIRT
Sbjct: 128 GLNLIIAFNYGSRDEIVRAVRSLARDVAAGLLDPASISAELISANLDTAGIPDPDLIIRT 187
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
GE RLS+FLLWQ AYSEF+F+P +WPDF A + + R+RRFGG+ +
Sbjct: 188 SGEMRLSNFLLWQAAYSEFLFLPIHWPDFRSSDLDAAYDAFRQRERRFGGVEVRA 242
>gi|312114737|ref|YP_004012333.1| undecaprenyl diphosphate synthase [Rhodomicrobium vannielii ATCC
17100]
gi|311219866|gb|ADP71234.1| undecaprenyl diphosphate synthase [Rhodomicrobium vannielii ATCC
17100]
Length = 245
Score = 258 bits (659), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 161/230 (70%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWAA RGLPR GHR+G+E E V AAAE+GI LT+F+FS NW+R
Sbjct: 15 PKHIAIIMDGNGRWAAQRGLPRSEGHRRGVESTRECVRAAAELGISYLTLFSFSSENWKR 74
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L++ F+++ + +NNIKVRVIG+ + D+ + ++A T NTG+
Sbjct: 75 PPLEVTYLMGLLRRFIRRDLAEIHQNNIKVRVIGSEEGVPRDLFAMFRDAMALTAGNTGM 134
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IAFNY +RDEI RA K + + ++G + D+ + AK DT+ +PDPDL+IRT G
Sbjct: 135 ELIIAFNYGARDEIVRAAKRLAEQAKAGEIDPADITQEMFAKQFDTAGIPDPDLLIRTSG 194
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E+R+S+FLLWQ AYSEF+F+ +WPDF+R+ A+ Y R+RRFGGL+
Sbjct: 195 EQRISNFLLWQCAYSEFLFVDNFWPDFTRQTLESAIASYQQRERRFGGLA 244
>gi|188581298|ref|YP_001924743.1| undecaprenyl diphosphate synthase [Methylobacterium populi BJ001]
gi|179344796|gb|ACB80208.1| undecaprenyl diphosphate synthase [Methylobacterium populi BJ001]
Length = 259
Score = 257 bits (657), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 125/230 (54%), Positives = 159/230 (69%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWAA+RGLPR GHR+G+E V +A +GI LTI++FS NWRR
Sbjct: 26 PRHVAIIMDGNGRWAASRGLPRFEGHRRGVEAVRRAVRSAITLGIHYLTIYSFSSENWRR 85
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SEISEL+ L+K F++ L NN++VRVIG+R L DI +L EAE +TR NTGL
Sbjct: 86 PPSEISELMGLLKLFVRSDLADLHANNVRVRVIGDRADLSGDIAGLLDEAEARTRANTGL 145
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +AFNY R EI RA++ I + G + D+D I + LDT+ +PDPDL+IRT G
Sbjct: 146 TLVVAFNYGGRQEILRAVRRIAAAVAEGRLRPEDIDLPTITEALDTAGIPDPDLVIRTSG 205
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E RLS+FL WQ AY+E+V P +WPDF F AL++Y+ RDRRFGGLS
Sbjct: 206 EHRLSNFLTWQTAYAEYVIEPGFWPDFDHAAFLAALDEYHRRDRRFGGLS 255
>gi|86357538|ref|YP_469430.1| undecaprenyl pyrophosphate synthase protein [Rhizobium etli CFN 42]
gi|86281640|gb|ABC90703.1| undecaprenyl pyrophosphate synthase protein [Rhizobium etli CFN 42]
Length = 215
Score = 256 bits (653), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 118/209 (56%), Positives = 157/209 (75%)
Query: 35 GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLK 94
GHRKG+E E V AA GIK LT+FAFS NWRRP +E+S+L+ L+K+F+++ L
Sbjct: 2 GHRKGVEAVRETVRAAGAAGIKYLTLFAFSSENWRRPEAEVSDLLGLLKAFIRRDLAELH 61
Query: 95 KNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD 154
+ N++++VIG+R SL DIL +L EAE+ T NT L L IAFNY SRDEISRA+ ++ +D
Sbjct: 62 RQNVRIKVIGDRHSLRSDILGLLLEAEETTTDNTALTLVIAFNYGSRDEISRAVVSLAKD 121
Query: 155 IESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYW 214
+E+G + + D+ +LI LDT+ +PDPDLIIRT GE+RLS+FLLWQ AYSEF+F+PEYW
Sbjct: 122 VEAGRLRAQDITPALINARLDTAGIPDPDLIIRTSGEERLSNFLLWQAAYSEFIFVPEYW 181
Query: 215 PDFSRELFFHALNQYNLRDRRFGGLSKKG 243
PDFS E+F AL ++ RDRRFGGLS +
Sbjct: 182 PDFSPEIFRSALEKFASRDRRFGGLSSQA 210
>gi|217979930|ref|YP_002364077.1| undecaprenyl diphosphate synthase [Methylocella silvestris BL2]
gi|217505306|gb|ACK52715.1| undecaprenyl diphosphate synthase [Methylocella silvestris BL2]
Length = 260
Score = 254 bits (649), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 117/230 (50%), Positives = 164/230 (71%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+G+IMDGNGRWAA+RGLPR GHR+G+E V A + + LT+++FS+ NW R
Sbjct: 21 PVHVGVIMDGNGRWAASRGLPRIEGHRRGLEALRGAVRTAIDFKLDYLTVYSFSMENWSR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
PV+E+++L+ L+K F++ LKK N+K++VIG R L DI +L+EAE T TGL
Sbjct: 81 PVTEVADLMGLLKRFIRNDLADLKKANVKIKVIGRRDDLKPDIRALLQEAETATCGGTGL 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL +AFNY +R EI+ A + + ++ SG + D+D + A LDT+ VPDPDLIIRT G
Sbjct: 141 NLIVAFNYGARQEIAAAARALAEEARSGLIDPADIDEAFFASRLDTAGVPDPDLIIRTSG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E+RLS+FL+WQ AYSEFVF+P +WPDF R+ F A+ ++ R+RRFGG++
Sbjct: 201 EQRLSNFLMWQAAYSEFVFLPIHWPDFDRKAFAAAVEEFGARERRFGGVT 250
>gi|118590007|ref|ZP_01547411.1| undecaprenyl diphosphate synthase [Stappia aggregata IAM 12614]
gi|118437504|gb|EAV44141.1| undecaprenyl diphosphate synthase [Stappia aggregata IAM 12614]
Length = 255
Score = 253 bits (647), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 116/233 (49%), Positives = 157/233 (67%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IMDGNGRWA ARGLPR GHR+G+ +++ A VGI+ +TI++FS NW R
Sbjct: 22 PRHVAFIMDGNGRWATARGLPRTEGHRQGLAALRKVIRHAGRVGIETITIYSFSSENWNR 81
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+S L+ L++ F+++ L + N+++R+IG R L+ IL +L EAED TR NTGL
Sbjct: 82 PQAEVSFLMGLLRRFVQRDLSELHEANVRIRIIGGRSDLEPGILALLNEAEDLTRHNTGL 141
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL +AFNY +R EI RA + + + +++G + D+ I LDTS +PDPDLIIRT G
Sbjct: 142 NLVVAFNYGARSEIVRAAQELAEKVQAGKMQPADITEDAITAALDTSGLPDPDLIIRTSG 201
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
E RLS+FLLWQ AYSEF F YWPDF F AL+ + R+RR+GGL K
Sbjct: 202 EMRLSNFLLWQAAYSEFYFCDLYWPDFDEAAFDKALSCFCSRERRYGGLDAKA 254
>gi|13470839|ref|NP_102408.1| undecaprenyl pyrophosphate synthetase [Mesorhizobium loti
MAFF303099]
gi|42559868|sp|Q98MB9|UPPS_RHILO RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|14021582|dbj|BAB48194.1| undecaprenyl pyrophosphate synthetase [Mesorhizobium loti
MAFF303099]
Length = 244
Score = 253 bits (646), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 116/234 (49%), Positives = 157/234 (67%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P H+ IIMDGNGRWA ARG+PR AGHR G+E + V AA ++GI LT++AFS NW
Sbjct: 2 TTPAHVAIIMDGNGRWAKARGMPRLAGHRAGVEALRKTVRAAPDLGISFLTVYAFSSENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP +E+S+L+ L+K F+++ L ++ ++VR+IG+R L DI +L+EAE T N
Sbjct: 62 SRPKAEVSDLMGLLKLFIRRDLAELHQSGVRVRIIGDRAGLQADIRGLLEEAESLTARNE 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
L L IAFNY RDEI R + + G + + + + A LDT +PDP+L+IRT
Sbjct: 122 SLTLVIAFNYGGRDEIVRTARKLASAAARGEIDAESITADSFAGGLDTQGIPDPELVIRT 181
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE RLS+FLLWQ AYSE VF+P YWPDFSRE AL ++ R+RRFGGL ++
Sbjct: 182 SGELRLSNFLLWQAAYSELVFLPCYWPDFSREHLAEALREFAGRERRFGGLGQQ 235
>gi|319783667|ref|YP_004143143.1| undecaprenyl diphosphate synthase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317169555|gb|ADV13093.1| undecaprenyl diphosphate synthase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 244
Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 118/234 (50%), Positives = 155/234 (66%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P H+ IIMDGNGRWA ARGLPR AGHR G+E + V AA +GI LT++AFS NW
Sbjct: 2 ATPAHVAIIMDGNGRWAKARGLPRLAGHRAGVEALRKTVRAAPGLGISYLTVYAFSSENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP SE+S+L+ L+K F+++ L ++ ++VR+IG+R L DI +L EAE T N
Sbjct: 62 SRPKSEVSDLMGLLKMFIRRDLAELHQSGVRVRIIGDRAGLQPDIRGLLDEAETLTAANE 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
L L IAFNY RDEI R + + + G + + + + A LDT +PDP+L+IRT
Sbjct: 122 SLTLVIAFNYGGRDEIVRTAQKLALAVARGELDAEAISAESFAVALDTQGIPDPELVIRT 181
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE RLS+FLLWQ AYSE VF+P YWPDFSRE AL ++ R+RRFGGL +
Sbjct: 182 SGELRLSNFLLWQAAYSELVFLPCYWPDFSREHLAEALREFAGRERRFGGLGGQ 235
>gi|114704872|ref|ZP_01437780.1| undecaprenyl pyrophosphate synthase [Fulvimarina pelagi HTCC2506]
gi|114539657|gb|EAU42777.1| undecaprenyl pyrophosphate synthase [Fulvimarina pelagi HTCC2506]
Length = 228
Score = 253 bits (645), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 116/225 (51%), Positives = 157/225 (69%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA ARGLPR GHR+G+E V AA E+GI+ LT+FAFS NW RP EI E
Sbjct: 1 MDGNGRWARARGLPRSVGHRRGVEAVRATVRAAGELGIEYLTLFAFSSENWSRPSEEIDE 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ L+K F+++ L K ++VR++G R +L DIL +L+EAE+ TR N L +AFN
Sbjct: 61 LLGLLKMFIRRDLADLHKEGVRVRIVGARDNLQPDILSLLEEAENLTRHNERQTLVVAFN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y +RDEI+RA++ I + + +G + +D + +LDT+ +PDPDLIIRT GE RLS+F
Sbjct: 121 YGARDEIARAVRAIARKVAAGEIDVATLDDEAVTAHLDTAGIPDPDLIIRTSGEIRLSNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
LLWQ AYSEFVF+P WP+F + A+ +Y RDRR+GGLS++
Sbjct: 181 LLWQAAYSEFVFMPMNWPEFDKGALQEAIGEYASRDRRYGGLSRE 225
>gi|291563193|emb|CBL42009.1| undecaprenyl diphosphate synthase [butyrate-producing bacterium
SS3/4]
Length = 242
Score = 252 bits (643), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 110/230 (47%), Positives = 156/230 (67%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +I+DGNGRWA RGLPR GH+KG E ++V AA +GI+ LT++ FS NW+R
Sbjct: 8 PAHVALILDGNGRWAKKRGLPRQLGHKKGCETLEQVVEDAARLGIRYLTVYGFSTENWKR 67
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L + + K+ +KNNI+VR+IG R DI+ + E++T+ NTG+
Sbjct: 68 PEEEVGALMQLFRFYAKRLLAMAEKNNIRVRMIGERGRFASDIVDAINVLEEKTKKNTGM 127
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
IA NY SRDEI+RA++ I D+E G + D+ + A YLDT+ +PDPDL+IRT G
Sbjct: 128 TFVIAVNYGSRDEITRAVRKIMTDVEEGKIAPEDMTEEVFASYLDTAGIPDPDLMIRTSG 187
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E RLS++LLWQ+AYSE WPDF++E +A+ QYN R+RRFGG++
Sbjct: 188 ELRLSNYLLWQLAYSELYVTECLWPDFNKEELLNAIRQYNKRERRFGGVT 237
>gi|210615978|ref|ZP_03290878.1| hypothetical protein CLONEX_03097 [Clostridium nexile DSM 1787]
gi|210149983|gb|EEA80992.1| hypothetical protein CLONEX_03097 [Clostridium nexile DSM 1787]
Length = 237
Score = 252 bits (643), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 113/231 (48%), Positives = 161/231 (69%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ II+DGNGRWA +G+PR GH +G + I A ++GIK LT++AFS NW R
Sbjct: 4 PQHVAIILDGNGRWAKKKGMPRNYGHAQGSKNVERICKEAYKMGIKYLTVYAFSTENWSR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE+ L+KL+++++K + +KN +KVRVIG++ +LDDDI + E E+ ++ N GL
Sbjct: 64 PKSEVDALMKLLRNYMKTCLKTAEKNRMKVRVIGDKTALDDDIRKRIDELEEASKNNDGL 123
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
N IA NY SRDE+ RA+K + D E G + + ++ ++ +YLDT D+PDPDL+IRT G
Sbjct: 124 NFQIALNYGSRDEMIRAMKRMCTDCEDGRLHADEISETVFEQYLDTHDIPDPDLLIRTSG 183
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E+RLS++LLWQ+AYSEF F WPDF++E A+ YN RDRRFGG+ +
Sbjct: 184 EQRLSNYLLWQLAYSEFYFTDVLWPDFTKEELKKAIEHYNSRDRRFGGVKE 234
>gi|158423321|ref|YP_001524613.1| di-trans-poly-cis-decaprenylcistransferase [Azorhizobium
caulinodans ORS 571]
gi|158330210|dbj|BAF87695.1| di-trans-poly-cis-decaprenylcistransferase [Azorhizobium
caulinodans ORS 571]
Length = 264
Score = 251 bits (642), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 120/232 (51%), Positives = 159/232 (68%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+GIIMDGNGRWA +R LPR GHR+G+E V +A E+GI+ LTI++FS NW R
Sbjct: 30 PVHVGIIMDGNGRWATSRKLPRVEGHRRGVEALRRCVRSAREIGIRFLTIYSFSSENWSR 89
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
PVSEISEL+ L++ FL+ L N++VR+IG R SL D+ +L EAE T NTGL
Sbjct: 90 PVSEISELMGLLRRFLRHDLAELHAANVRVRIIGERASLSRDLSAMLDEAEALTAANTGL 149
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +AFNY SR EI+ A + ++ +G++ ++ + L+ L T+ +PDPDLIIRT G
Sbjct: 150 TLVVAFNYGSRQEIAEAAARLAAEVAAGTLRPEEITADLLGSRLLTAGIPDPDLIIRTSG 209
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+RLS+FLLWQ AY+E VF+P YWPDF AL +Y RDRRFGGL+ +
Sbjct: 210 EQRLSNFLLWQAAYAELVFLPIYWPDFDHAALLGALQEYARRDRRFGGLTAR 261
>gi|114798355|ref|YP_760476.1| undecaprenyl diphosphate synthase [Hyphomonas neptunium ATCC 15444]
gi|114738529|gb|ABI76654.1| undecaprenyl diphosphate synthase [Hyphomonas neptunium ATCC 15444]
Length = 252
Score = 251 bits (642), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 117/233 (50%), Positives = 159/233 (68%), Gaps = 1/233 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA AR LPR AGH +G+E V AA ++GI+ LT+F+FS NWRR
Sbjct: 20 PKHVAIIMDGNGRWATARHLPRTAGHERGVEALRRTVDAAGDLGIRYLTVFSFSTENWRR 79
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E++ L L+K+++++ LK +++R+IG R L DI ++ +AE++TR NT
Sbjct: 80 PAAEVNTLFGLLKAYVQRDLSRLKDEGVRIRIIGQRAGLPADIASLVSKAEEETRTNTEF 139
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL IAFNY SRDEI RA + +D++SG + D+ + A YLDT D+PDPDL+IRT G
Sbjct: 140 NLTIAFNYGSRDEILRAASALARDVKSG-LRDPDITENEFAGYLDTGDLPDPDLLIRTSG 198
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
E R+S+FLLWQ AY+EF+F WPDF R AL YN R+RR+G +S G
Sbjct: 199 EFRISNFLLWQAAYAEFLFCDVLWPDFGRSHLEDALKCYNERERRYGAVSPGG 251
>gi|225570390|ref|ZP_03779415.1| hypothetical protein CLOHYLEM_06490 [Clostridium hylemonae DSM
15053]
gi|225160761|gb|EEG73380.1| hypothetical protein CLOHYLEM_06490 [Clostridium hylemonae DSM
15053]
Length = 245
Score = 251 bits (641), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 112/232 (48%), Positives = 160/232 (68%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ II+DGNGRWA ++G+PR GH +G + I A +GIK LT++AFS NW R
Sbjct: 11 PQHVAIILDGNGRWAKSKGMPRNYGHAQGSKNVERICEEAYRMGIKYLTVYAFSTENWNR 70
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL+++++K + KN++K+RVIG+ LDDDI + E + T+ N GL
Sbjct: 71 PQDEVDALMKLLRNYMKTCLKTAAKNDMKIRVIGDLSRLDDDIRGRIAELVEATKNNKGL 130
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
N IA NY SRDE+ RA++ + +D SG + + D+D +L YLDT D+PDPDL+IRT G
Sbjct: 131 NFQIAINYGSRDEMVRAVRRLAEDCASGRIKADDIDETLFEHYLDTHDIPDPDLLIRTSG 190
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+RLS++LLWQ+AY+EF F WPDF++E A+ QYN RDRR+GG+ ++
Sbjct: 191 EQRLSNYLLWQMAYTEFYFTEILWPDFTKEELVKAVAQYNARDRRYGGVKEE 242
>gi|170738973|ref|YP_001767628.1| undecaprenyl diphosphate synthase [Methylobacterium sp. 4-46]
gi|168193247|gb|ACA15194.1| undecaprenyl diphosphate synthase [Methylobacterium sp. 4-46]
Length = 267
Score = 251 bits (641), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 117/232 (50%), Positives = 161/232 (69%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWAA RGLPR GHR+G+E V AA E GI LT+++FS NWRR
Sbjct: 34 PAHVAIIMDGNGRWAARRGLPRAEGHRRGVEAVRRAVRAALEFGIGYLTVYSFSSENWRR 93
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+++L+ L+K F+++ L N ++VR+IG R L DI +L+EAE++T NT L
Sbjct: 94 PAAEVADLMGLLKLFVRRDLADLHANGVRVRIIGAREGLPADIAALLREAEERTAANTRL 153
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +AFNY R EI RA++++ + ++ G + +D +A LDT +PDPDL+IRT G
Sbjct: 154 TLVVAFNYGGRQEIVRAVQSLARAVQEGRLAPEAIDLDAVAGALDTRGIPDPDLVIRTSG 213
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FL WQ AYSEFVF+P+ WPDF R F A++ Y R+RRFGGLS +
Sbjct: 214 EQRVSNFLTWQTAYSEFVFLPDLWPDFDRAAFAAAIDAYQGRERRFGGLSAQ 265
>gi|110633738|ref|YP_673946.1| undecaprenyl pyrophosphate synthetase [Mesorhizobium sp. BNC1]
gi|110284722|gb|ABG62781.1| Undecaprenyl pyrophosphate synthetase [Chelativorans sp. BNC1]
Length = 237
Score = 250 bits (639), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 117/233 (50%), Positives = 162/233 (69%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA ARGLPR AGHR G+E V AA E+GI+ LT++AFS NW R
Sbjct: 3 PAHIAIIMDGNGRWARARGLPRSAGHRAGVEALRRTVRAAGEMGIRWLTVYAFSSENWSR 62
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SEIS+L+ L+K F+++ L ++ ++VR++G+R L+ DI +L EAE+ T NT +
Sbjct: 63 PKSEISDLMGLLKLFIRRDLAELHQSGVRVRIVGSREGLEPDISALLLEAENLTAGNTNM 122
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL +AFNY SRDEI RA + + + ++G + + + + LDT +PDPDLIIRT G
Sbjct: 123 NLAVAFNYGSRDEILRAARAVALEAKAGRLDPEKMTAEEFSARLDTVGMPDPDLIIRTSG 182
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
E+RLS+FLLWQ AY+EFVF+P +WPDF A++ + RDRRFG ++++
Sbjct: 183 EQRLSNFLLWQAAYTEFVFLPCHWPDFGPGDLAAAISLFEERDRRFGSIAQEA 235
>gi|166031003|ref|ZP_02233832.1| hypothetical protein DORFOR_00684 [Dorea formicigenerans ATCC
27755]
gi|166029270|gb|EDR48027.1| hypothetical protein DORFOR_00684 [Dorea formicigenerans ATCC
27755]
Length = 235
Score = 249 bits (637), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 112/232 (48%), Positives = 164/232 (70%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ II+DGNGRWA A+G+ R GH +G + +I A +GIK LT++AFS NW R
Sbjct: 4 PQHVAIILDGNGRWAKAKGMSRNYGHAQGSKNVEKICEEAWCMGIKYLTVYAFSTENWNR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+KL+++++K + KN++KVRVIG+ LD+DI + E E+ T+ N GL
Sbjct: 64 PKEEVNALMKLLRNYMKTCLKTAAKNDMKVRVIGDITKLDEDIQKRILELEEATKNNGGL 123
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
N IA NY SRDEI+RA++ + +D++ G + +V+ + I +YLDT D+PDPDL+IRT G
Sbjct: 124 NFQIAINYGSRDEITRAVRTLAEDVKEGKLMPEEVNEACIERYLDTHDIPDPDLLIRTSG 183
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+RLS++LLWQ+AY+EF F WPDFS++ A+ QYN RDRR+GG+ ++
Sbjct: 184 EQRLSNYLLWQLAYTEFYFTDVPWPDFSKQELEKAIEQYNRRDRRYGGVKEE 235
>gi|304391649|ref|ZP_07373591.1| undecaprenyl pyrophosphate synthetase 1 [Ahrensia sp. R2A130]
gi|303295878|gb|EFL90236.1| undecaprenyl pyrophosphate synthetase 1 [Ahrensia sp. R2A130]
Length = 276
Score = 249 bits (636), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 117/230 (50%), Positives = 159/230 (69%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA ARGL R GHRKG+E V AA E+GI+ LT+F+FS NW R
Sbjct: 37 PKHVAIIMDGNGRWAQARGLHRSRGHRKGVEAVRATVRAAGELGIETLTLFSFSSENWNR 96
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +EI+EL++L+K F+++ L K N+++ +IG+R + DIL +L EA TR NT
Sbjct: 97 PAAEINELMRLLKIFIRRDLADLHKENVRISIIGSRDGVPSDILPLLDEAVALTRNNTRT 156
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IAFNY +RDE++RA + I + + +G++ +V IA ++DT+ DP+LIIRT G
Sbjct: 157 RLVIAFNYGARDELARATQRIAEAVAAGTLDPSEVTQDTIAAHMDTAGWSDPELIIRTSG 216
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
EKRLS+FLLWQ AYSEFVF+ WP+F + A+ +Y RDRRFGGL+
Sbjct: 217 EKRLSNFLLWQAAYSEFVFVDCMWPEFDKAQLEAAIGEYVSRDRRFGGLA 266
>gi|225026989|ref|ZP_03716181.1| hypothetical protein EUBHAL_01245 [Eubacterium hallii DSM 3353]
gi|224955674|gb|EEG36883.1| hypothetical protein EUBHAL_01245 [Eubacterium hallii DSM 3353]
Length = 241
Score = 248 bits (633), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 112/229 (48%), Positives = 154/229 (67%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ II+DGNGRWA R +PR GH +G + +I A ++GIK LT++AFS NW+R
Sbjct: 13 PEHVAIILDGNGRWAKKRFMPRNYGHSQGAKTVEQICEDAWDIGIKYLTVYAFSTENWKR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL++ +LK KNN++VRVIG + LDDDI + E E+ + NTGL
Sbjct: 73 PEKEVKALMKLLRKYLKDCIERTAKNNMRVRVIGEKSRLDDDIRAAIDELEEVSAANTGL 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
N IA NY SRDE+ RA+ ++ QD + G+ ++ A YLDT D+PDPDL+IRT G
Sbjct: 133 NFTIALNYGSRDEMVRAMHHMAQDCKDGAFDPEEITEEKFASYLDTKDLPDPDLMIRTSG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+RLS+++LWQ+AY+EF F WPDF +E A+ YN RDRRFGG+
Sbjct: 193 EQRLSNWMLWQLAYAEFYFTDVLWPDFDKEELIRAVEYYNTRDRRFGGV 241
>gi|323484221|ref|ZP_08089590.1| hypothetical protein HMPREF9474_01341 [Clostridium symbiosum
WAL-14163]
gi|323692103|ref|ZP_08106350.1| undecaprenyl diphosphate synthase [Clostridium symbiosum WAL-14673]
gi|323402463|gb|EGA94792.1| hypothetical protein HMPREF9474_01341 [Clostridium symbiosum
WAL-14163]
gi|323503903|gb|EGB19718.1| undecaprenyl diphosphate synthase [Clostridium symbiosum WAL-14673]
Length = 246
Score = 248 bits (633), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 111/229 (48%), Positives = 156/229 (68%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ +I+DGNGRWA RGLPR AGH++G + V AA +GIK LT++ FS NW+R
Sbjct: 17 PEHVALILDGNGRWAKKRGLPRTAGHKQGCVTVEQTVEDAARLGIKYLTVYGFSTENWKR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
V E+ L++L + +LK+ K NN++V++IG+R D DI+ + E +T+ NTG+
Sbjct: 77 SVEEVGALMQLFRYYLKRLLKIAKSNNVRVKMIGDRTRFDRDIIEGIDTLERETKNNTGM 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
IA NY RDEI+RAI+ + D + G + S V +++ YLDT+D+PDPDL+IRT G
Sbjct: 137 TFVIAVNYGGRDEITRAIRRMTADCKEGRLDSGSVTEQVVSSYLDTADIPDPDLLIRTSG 196
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS++LLWQ+AYSE V WPDF++E A+ QYN RDRRFGG+
Sbjct: 197 EIRLSNYLLWQLAYSEIVVTDCLWPDFNKEELLKAIAQYNKRDRRFGGV 245
>gi|209964516|ref|YP_002297431.1| undecaprenyl pyrophosphate synthetase [Rhodospirillum centenum SW]
gi|209957982|gb|ACI98618.1| undecaprenyl pyrophosphate synthetase [Rhodospirillum centenum SW]
Length = 245
Score = 247 bits (631), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 111/236 (47%), Positives = 158/236 (66%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ + +PP H+ IIMDGNGRWA ARGLPR AGHRKG+E + AA E+GI+ LT+++
Sbjct: 5 SPLPQGAPPVHVAIIMDGNGRWATARGLPRTAGHRKGVEAVRRALEAARELGIRYLTLYS 64
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RP E+S+L++L++ +L+ SL KN +++RVIG+R L DI+ ++ AE
Sbjct: 65 FSSENWNRPRDEVSDLMQLLRFYLRGEIASLHKNGVRLRVIGDRSRLSKDIISLIDNAES 124
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T N L L IA +Y R EI+ + I + +++G + D+D A YL T+ +PDP
Sbjct: 125 LTASNETLTLVIALSYGGRQEIASTTRQIAEQVKAGHLEPSDIDEGRFANYLSTAGIPDP 184
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DL IRT GEKR+S+FLLWQ+AY+E VF+ WPDF++ A+ +Y+ RDRRFG
Sbjct: 185 DLCIRTSGEKRISNFLLWQLAYAELVFVDTLWPDFTKRDLEDAIQEYHRRDRRFGA 240
>gi|154253631|ref|YP_001414455.1| undecaprenyl diphosphate synthase [Parvibaculum lavamentivorans
DS-1]
gi|154157581|gb|ABS64798.1| undecaprenyl diphosphate synthase [Parvibaculum lavamentivorans
DS-1]
Length = 254
Score = 247 bits (631), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 113/240 (47%), Positives = 163/240 (67%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
++ + PP H+ IIMDGNGRWAA R LPR AGHR+G+E IV AA E+GI+ LT++
Sbjct: 8 MSDIAPGKPPRHVAIIMDGNGRWAAKRHLPRAAGHRQGVETVRVIVRAAGELGIEYLTLY 67
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
FS NW+RPV E+++L+ L++ F+++ L +N ++VR+IG R LD DI+ ++ EAE
Sbjct: 68 GFSSENWKRPVEEVNDLMGLLRLFIRRDLAELHQNGVRVRIIGERDHLDADIVALIDEAE 127
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
TR N L L IAFNY ++EI+ A + + ++++G + + I+ +LDT+ VPD
Sbjct: 128 ALTRSNDRLQLVIAFNYGGQNEIASAARRMAYEVKAGRLDPEAISPETISGFLDTAGVPD 187
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDLIIRT GEKRLS+FL+WQ AYSE VF +WPDF+ + A+ +Y R RRFG + +
Sbjct: 188 PDLIIRTSGEKRLSNFLIWQSAYSELVFSDIFWPDFTPDCLRDAVAEYQRRSRRFGAVGE 247
>gi|325262933|ref|ZP_08129669.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium sp. D5]
gi|324032027|gb|EGB93306.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium sp. D5]
Length = 238
Score = 247 bits (630), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 111/232 (47%), Positives = 161/232 (69%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ II+DGNGRWA ++G+PR GH +G + I A +GIK LT++AFS NW R
Sbjct: 4 PQHVAIILDGNGRWAKSKGMPRNYGHAQGSKNVERICEEAWRMGIKYLTVYAFSTENWNR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE+ L+KL+++++K + +KN++K+RVIG+ +LD+DI ++E E+ ++ N GL
Sbjct: 64 PKSEVDALMKLLRNYMKTCLKTAEKNDMKIRVIGDIKALDEDIKNRIRELEEASKDNNGL 123
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
N IA NY SRDE+ RA+K++ QD V ++ SL YLDT +PDPDL+IRT G
Sbjct: 124 NFTIAINYGSRDEMIRAVKSLTQDCVDQKVSVEEISESLYESYLDTHGIPDPDLLIRTSG 183
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+RLS++LLWQ+AY+EF F WPDF++E A+ QYN RDRR+GG+ ++
Sbjct: 184 EQRLSNYLLWQLAYTEFYFTDILWPDFTKEELVKAVEQYNSRDRRYGGVKEE 235
>gi|291550818|emb|CBL27080.1| undecaprenyl diphosphate synthase [Ruminococcus torques L2-14]
Length = 236
Score = 246 bits (627), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 113/231 (48%), Positives = 159/231 (68%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI II+DGNGRWA ++G+PR GH +G + +I A +GIK LT++AFS NW R
Sbjct: 4 PQHIAIILDGNGRWAKSKGMPRNYGHAQGAKNVEKICEEAWRMGIKYLTVYAFSTENWSR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L+KL+++++K + KN++K+RVIG+ LD+DI ++E E+ T N GL
Sbjct: 64 PQNEVDALMKLLRNYMKTCLKTAAKNDMKIRVIGDIEPLDEDIKGRIRELEEATASNGGL 123
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
N IA NY SRDEI+RA + + +D +G V +D SL YLDT+D+PDPDL+IRT G
Sbjct: 124 NFTIALNYGSRDEITRAARKLAKDCAAGKVNPDTIDESLFNSYLDTNDIPDPDLMIRTSG 183
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E+RLS++LLWQ+AYSEF F WP F++E A+ +YN R RRFGG+ +
Sbjct: 184 EQRLSNYLLWQLAYSEFYFTDIPWPAFTKEELIKAVEEYNRRHRRFGGVEE 234
>gi|154506086|ref|ZP_02042824.1| hypothetical protein RUMGNA_03628 [Ruminococcus gnavus ATCC 29149]
gi|153793585|gb|EDN76005.1| hypothetical protein RUMGNA_03628 [Ruminococcus gnavus ATCC 29149]
Length = 238
Score = 245 bits (626), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 113/232 (48%), Positives = 159/232 (68%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI II+DGNGRWA A+G+PR GH +G + I A +GIK LT++AFS NW R
Sbjct: 4 PQHIAIILDGNGRWAKAKGMPRNYGHAQGSKNVERICEEAWRMGIKYLTVYAFSTENWNR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE+S L+KL+++++K + KN++KVRV+G+ +LD+DI + E E+ T+ N GL
Sbjct: 64 PESEVSALMKLLRNYMKTCLKTAAKNDMKVRVLGDIEALDEDIRTRILELEEATKDNGGL 123
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
N IA NY SRDE+ RA++ + +D G V +D ++ YLDT +PDPDL+IRT G
Sbjct: 124 NFQIALNYGSRDEMIRAVRRLARDCADGKVVPETIDETVFESYLDTHGIPDPDLLIRTSG 183
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E RLS++LLWQ+AY+EF F WPDF++E A+ QYN RDRR+GG+ ++
Sbjct: 184 ELRLSNYLLWQLAYTEFYFTEIPWPDFTKEELEKAIAQYNKRDRRYGGVKEE 235
>gi|323137308|ref|ZP_08072386.1| undecaprenyl diphosphate synthase [Methylocystis sp. ATCC 49242]
gi|322397295|gb|EFX99818.1| undecaprenyl diphosphate synthase [Methylocystis sp. ATCC 49242]
Length = 258
Score = 245 bits (626), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 115/238 (48%), Positives = 156/238 (65%), Gaps = 5/238 (2%)
Query: 5 MMSSSP-----PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
M +++P P H+ +IMDGNGRWAAARGLPR GHR+G+E V A ++ I LT
Sbjct: 9 MATTAPEIGAAPRHVALIMDGNGRWAAARGLPRFEGHRRGVEALRRAVRGAIDLKISYLT 68
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
+++FS NW RP E+ L+ L+ F++ L NN++VRVIG R L +I +L+E
Sbjct: 69 VYSFSAENWARPREEVQSLLGLLHRFIRNDLAELHGNNVRVRVIGARADLAPEIADLLRE 128
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV 179
AE T+ NTGL L +AFNY +R EI+ A + + + + G + +D+ IA LDT+D+
Sbjct: 129 AEQVTQANTGLTLVVAFNYGARQEIAAAARALAEMVAEGRLDPEKIDADAIAARLDTADI 188
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDPDLIIRT GE+RLS+FLLWQ AY+EFVF+P WPDF A+ +Y RDRRFG
Sbjct: 189 PDPDLIIRTSGEQRLSNFLLWQAAYAEFVFLPILWPDFDHAALVAAIAEYKHRDRRFG 246
>gi|167766542|ref|ZP_02438595.1| hypothetical protein CLOSS21_01048 [Clostridium sp. SS2/1]
gi|167711665|gb|EDS22244.1| hypothetical protein CLOSS21_01048 [Clostridium sp. SS2/1]
Length = 250
Score = 245 bits (625), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 111/237 (46%), Positives = 162/237 (68%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
M + + P H+ II+DGNGRWA R LPR GHR+G +V +I+ A ++GIK LT++A
Sbjct: 14 VQMENLNIPQHVAIILDGNGRWAKKRHLPRNMGHRQGSKVVEKIIEDAHDLGIKYLTVYA 73
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW+RP E++ L+KL++ +LK KNN+KVRVIG+ L +D+ + E E
Sbjct: 74 FSTENWKRPQDEVNALMKLLRDYLKTCIKRANKNNMKVRVIGDITGLSEDLQEKIVELEK 133
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
++ NTG+N IA NY SRDE+ RA++++ D+ SG++ ++ + YLDT ++PDP
Sbjct: 134 ASKDNTGINFTIALNYGSRDEMVRAMRHMADDLSSGNLSKDEITEEVFNGYLDTKELPDP 193
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DL+IRT GE+RLS+F+LWQ+AY+EF F WPDF+++ A+ YN RDRRFGG+
Sbjct: 194 DLMIRTSGEERLSNFMLWQLAYTEFYFTDVLWPDFNKKELIKAIEYYNGRDRRFGGI 250
>gi|317498944|ref|ZP_07957227.1| di-trans,poly-cis-decaprenylcistransferase [Lachnospiraceae
bacterium 5_1_63FAA]
gi|316893777|gb|EFV15976.1| di-trans,poly-cis-decaprenylcistransferase [Lachnospiraceae
bacterium 5_1_63FAA]
Length = 235
Score = 245 bits (625), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 110/229 (48%), Positives = 159/229 (69%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ II+DGNGRWA R LPR GHR+G +V +I+ A ++GIK LT++AFS NW+R
Sbjct: 7 PQHVAIILDGNGRWAKKRHLPRNMGHRQGSKVVEQIIEDAHDLGIKYLTVYAFSTENWKR 66
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+KL++ +LK KNN+KVRVIG+ L +D+ + E E ++ NTG+
Sbjct: 67 PQDEVNALMKLLRDYLKTCIKRANKNNMKVRVIGDITGLSEDLQEKIVELEKASKDNTGI 126
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
N IA NY SRDE+ RA++++ D+ SG++ ++ + YLDT ++PDPDL+IRT G
Sbjct: 127 NFTIALNYGSRDEMVRAMRHMADDLSSGNLSKDEITEEVFNGYLDTKELPDPDLMIRTSG 186
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+RLS+F+LWQ+AY+EF F WPDF+++ A+ YN RDRRFGG+
Sbjct: 187 EERLSNFMLWQLAYTEFYFTDVLWPDFNKKELIKAIEYYNGRDRRFGGI 235
>gi|291524865|emb|CBK90452.1| undecaprenyl diphosphate synthase [Eubacterium rectale DSM 17629]
Length = 241
Score = 244 bits (624), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 112/233 (48%), Positives = 163/233 (69%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P+HI II+DGNGRWA ++G+PR GH G + I AA ++G+K LT++AFS NW
Sbjct: 2 STPEHIAIILDGNGRWAKSKGMPRNYGHTVGAKNVENICKAANDLGVKYLTLYAFSTENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP SE++ L+KL++S+LK + KNN++VRVIG L ++ ++ E+ + +NT
Sbjct: 62 NRPESEVAALMKLLESYLKNCIKTANKNNMRVRVIGEISRLSENFQEKIRNLEEVSSVNT 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GLNL IA NY SRDE+ RA+K++ D ++G++ + D+D+ + YLDT ++PDPDL+IRT
Sbjct: 122 GLNLTIAINYGSRDEMIRAVKHMIADHDAGNLSADDIDADTFSSYLDTKELPDPDLLIRT 181
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
GE+RLS++LLWQ+AY+EF F WP F + A++ YN RDRRFGGL +
Sbjct: 182 SGEQRLSNYLLWQLAYAEFYFTDVPWPAFDKNELKKAIDAYNKRDRRFGGLKE 234
>gi|298291818|ref|YP_003693757.1| undecaprenyl diphosphate synthase [Starkeya novella DSM 506]
gi|296928329|gb|ADH89138.1| undecaprenyl diphosphate synthase [Starkeya novella DSM 506]
Length = 255
Score = 244 bits (623), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 111/233 (47%), Positives = 154/233 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA + GLPR GHR+G E V AA E+GI+ LTI++FS NW R
Sbjct: 22 PRHVAIIMDGNGRWATSHGLPRFEGHRRGAEAVRRTVTAARELGIEALTIYSFSSENWSR 81
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EI +L+ L+K F++ L NN+++R+IG D ++ +L EAE TR NTG+
Sbjct: 82 PEEEIGQLMGLLKRFIRSDLKELHANNVRLRIIGEGHPTDPEVQGLLDEAETLTRANTGV 141
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +AFNY SR+EI+RA ++ + + +G++ D+ + LDT+ +P DL+IRT G
Sbjct: 142 TLTVAFNYGSRNEIARAAQSFARQVAAGTLRPEDITPERFDEALDTAGLPPLDLVIRTSG 201
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
E+RLS+FLLWQ AY+E VF+P +WPDF R AL +Y R+RRFGG+ G
Sbjct: 202 EQRLSNFLLWQAAYAELVFLPVFWPDFDRAWLERALAEYGRRERRFGGVDANG 254
>gi|291558580|emb|CBL37380.1| undecaprenyl diphosphate synthase [butyrate-producing bacterium
SSC/2]
Length = 235
Score = 244 bits (623), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 110/229 (48%), Positives = 159/229 (69%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ II+DGNGRWA R LPR GHR+G +V +I+ A ++GIK LT++AFS NW+R
Sbjct: 7 PQHVAIILDGNGRWAKKRHLPRNMGHRQGSKVVEKIIEDAHDLGIKYLTVYAFSTENWKR 66
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+KL++ +LK KNN+KVRVIG+ L +D+ + E E ++ NTG+
Sbjct: 67 PQDEVNALMKLLRDYLKTCIKRANKNNMKVRVIGDITGLSEDLQEKIVELEKASKDNTGI 126
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
N IA NY SRDE+ RA++++ D+ SG++ ++ + YLDT ++PDPDL+IRT G
Sbjct: 127 NFTIALNYGSRDEMVRAMRHMADDLSSGNLSKDEITEEVFNGYLDTKELPDPDLMIRTSG 186
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+RLS+F+LWQ+AY+EF F WPDF+++ A+ YN RDRRFGG+
Sbjct: 187 EERLSNFMLWQLAYTEFYFTDVLWPDFNKKELIKAIEYYNGRDRRFGGI 235
>gi|225375367|ref|ZP_03752588.1| hypothetical protein ROSEINA2194_00992 [Roseburia inulinivorans DSM
16841]
gi|225212856|gb|EEG95210.1| hypothetical protein ROSEINA2194_00992 [Roseburia inulinivorans DSM
16841]
Length = 239
Score = 244 bits (622), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 111/232 (47%), Positives = 157/232 (67%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ II+DGNGRWA ++G+PR GH G + + AA ++GIK LT++AFS NW R
Sbjct: 4 PQHVAIILDGNGRWAKSKGMPRNYGHTVGAKNVETVCQAAHDMGIKYLTLYAFSTENWNR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E++ L+KL++S+LK + KNN++VRVIG+ L + +KE E + N GL
Sbjct: 64 PDNEVNALMKLLESYLKNCIKTADKNNMRVRVIGDTTKLSEKFQNQIKELESASAHNDGL 123
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL IA NY SRDE+ R ++ ++ D+ G + +++D + YLDT D+PDPDL+IRT G
Sbjct: 124 NLQIAINYGSRDEMLRGMRKMYADLRDGKLQENEIDETHFEAYLDTKDIPDPDLLIRTSG 183
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+RLS++LLWQ+AYSEF F WPDF +E A+ YN RDRRFG LS++
Sbjct: 184 EQRLSNYLLWQLAYSEFYFTEVPWPDFHKEELEKAVEAYNKRDRRFGALSEE 235
>gi|254469652|ref|ZP_05083057.1| undecaprenyl pyrophosphate synthetase 1 [Pseudovibrio sp. JE062]
gi|211961487|gb|EEA96682.1| undecaprenyl pyrophosphate synthetase 1 [Pseudovibrio sp. JE062]
Length = 257
Score = 244 bits (622), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 116/232 (50%), Positives = 157/232 (67%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P H+ IIMDGNGRWA RGLPR GHR+G++ E V A + GI LT+F+FS NW
Sbjct: 20 SVPRHVAIIMDGNGRWAQRRGLPRTEGHRRGVKTLREAVKHAQKRGISYLTLFSFSSENW 79
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+S L+ L++ F+ L K N+KVRVIG++ +LD +L +L +AE +T T
Sbjct: 80 SRPQQEVSFLMALLRRFVYDDLKDLVKANVKVRVIGSKENLDKSMLTLLNDAEQKTAHCT 139
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL L IAFNY +RDE RA + + + +E+G + + D+ ++ LDT ++PDPDLI+RT
Sbjct: 140 GLVLVIAFNYGARDEYVRAARKLAERVEAGELKAADIGEDDVSACLDTHEMPDPDLIVRT 199
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
GGE+RLS+FLLWQ AY+EF F P WP+F F AL ++ RDRR+GGLS
Sbjct: 200 GGEQRLSNFLLWQAAYAEFYFAPTPWPEFDSGAFDDALLAFSNRDRRYGGLS 251
>gi|302670319|ref|YP_003830279.1| undecaprenyl pyrophosphate synthase UppS [Butyrivibrio
proteoclasticus B316]
gi|302394792|gb|ADL33697.1| undecaprenyl pyrophosphate synthase UppS [Butyrivibrio
proteoclasticus B316]
Length = 240
Score = 244 bits (622), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 107/232 (46%), Positives = 159/232 (68%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S+ P H+ II+DGNGRWA A+G+PR GH +G + +I+ A ++GIK LT++AFS N
Sbjct: 5 SNIPQHVAIILDGNGRWAKAKGMPRNYGHMQGAKAVEDILVDARDIGIKYLTVYAFSTEN 64
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP +E+S L+ +++++LK KNN++ RVIG++ L +DI ++E E+ T N
Sbjct: 65 WTRPEAEVSALMTILRNYLKTSIKKSMKNNVRCRVIGDKSGLSEDIQEAIRELEEATAGN 124
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
TGL IA NY SRDEI+RA++ + + +++G + + D+ +IA+ LDT+ +PDPDL+IR
Sbjct: 125 TGLTFTIAINYGSRDEITRAVRKVAEKVQNGEITAADITQDMIAENLDTNYLPDPDLLIR 184
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
T E+R+S++LLWQ AYSEF F WPDF +E A+ Y R R+FGGL
Sbjct: 185 TCNEQRISNYLLWQCAYSEFYFTEVAWPDFDKEQLLKAVEAYGNRTRKFGGL 236
>gi|307942146|ref|ZP_07657497.1| undecaprenyl pyrophosphate synthetase 1 [Roseibium sp. TrichSKD4]
gi|307774432|gb|EFO33642.1| undecaprenyl pyrophosphate synthetase 1 [Roseibium sp. TrichSKD4]
Length = 255
Score = 243 bits (621), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 112/232 (48%), Positives = 155/232 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IMDGNGRWA +RGL R GHR+G+E +V A ++G++ +T F+FS NWRR
Sbjct: 22 PKHVAFIMDGNGRWAKSRGLARTEGHRRGLEALRGVVRHAGKIGVEVVTFFSFSSENWRR 81
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L++ F+++ L + N+++R+IG R L+ I +L+EAE T+ NTGL
Sbjct: 82 PQQEVSFLMTLLRRFMQRDLSELHEANVRIRIIGEREDLEPGIRSLLEEAESLTKDNTGL 141
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +AFNY SRDEI RA + + + +G + + + +++ LDTS +PDPDL+IRT G
Sbjct: 142 TLVVAFNYGSRDEIVRAARKLSLKVAAGELTADQITEDAVSEALDTSGLPDPDLLIRTSG 201
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E RLS+FLLWQ AY+EF F P WPDF F A+ Y RDRRFGGLS K
Sbjct: 202 EIRLSNFLLWQSAYTEFHFSPLNWPDFDETAFDRAIADYCGRDRRFGGLSAK 253
>gi|153815803|ref|ZP_01968471.1| hypothetical protein RUMTOR_02048 [Ruminococcus torques ATCC 27756]
gi|317502107|ref|ZP_07960288.1| Di-trans,poly-cis-decaprenylcistransferase [Lachnospiraceae
bacterium 8_1_57FAA]
gi|331090379|ref|ZP_08339260.1| di-trans,poly-cis-decaprenylcistransferase [Lachnospiraceae
bacterium 3_1_46FAA]
gi|145846828|gb|EDK23746.1| hypothetical protein RUMTOR_02048 [Ruminococcus torques ATCC 27756]
gi|316896496|gb|EFV18586.1| Di-trans,poly-cis-decaprenylcistransferase [Lachnospiraceae
bacterium 8_1_57FAA]
gi|330401126|gb|EGG80719.1| di-trans,poly-cis-decaprenylcistransferase [Lachnospiraceae
bacterium 3_1_46FAA]
Length = 235
Score = 243 bits (621), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 158/231 (68%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI II+DGNGRWA A+G+PR GH +G + +I A +GIK LT++AFS NW R
Sbjct: 4 PQHIAIILDGNGRWAKAKGMPRNYGHAQGSKNVEKICEEAWRMGIKYLTVYAFSTENWSR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E++ L+KL+++++K + KN++K+RVIG+ LDDDI ++E E T N GL
Sbjct: 64 PENEVAALMKLLRNYMKTCLKTAAKNDMKIRVIGDIEPLDDDIKSRIRELEAATTDNGGL 123
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
N IA NY SRDE++RA + + +D G + + ++D S+ YLDT +PDPD++IRT G
Sbjct: 124 NFTIALNYGSRDELTRAAQKMAKDCAEGKIKAEEIDESVFETYLDTHGIPDPDMMIRTSG 183
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E+RLS++LLWQ+AYSEF F WPDF++E A+ +YN R RRFG + +
Sbjct: 184 EQRLSNYLLWQLAYSEFYFTDVPWPDFTKEELVKAIEEYNHRHRRFGKVEE 234
>gi|238924131|ref|YP_002937647.1| undecaprenyl diphosphate synthase [Eubacterium rectale ATCC 33656]
gi|238875806|gb|ACR75513.1| undecaprenyl diphosphate synthase [Eubacterium rectale ATCC 33656]
gi|291529006|emb|CBK94592.1| undecaprenyl diphosphate synthase [Eubacterium rectale M104/1]
Length = 241
Score = 243 bits (621), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 112/233 (48%), Positives = 161/233 (69%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P+HI II+DGNGRWA ++G+PR GH G + I AA ++G+K LT++AFS NW
Sbjct: 2 STPEHIAIILDGNGRWAKSKGMPRNYGHTVGAKNVENICKAANDLGVKYLTLYAFSTENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP SE++ L+KL++S+LK + KNN++VRVIG L ++ ++ E+ + +NT
Sbjct: 62 NRPESEVAALMKLLESYLKNCIKTANKNNMRVRVIGEISRLSENFQEKIRNLEEVSSVNT 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GLNL IA NY SRDE+ RA+K++ D + G + + D+D+ + YLDT ++PDPDL+IRT
Sbjct: 122 GLNLTIAINYGSRDEMIRAVKHMIADHDDGKLSADDIDADTFSSYLDTRELPDPDLLIRT 181
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
GE+RLS++LLWQ+AY+EF F WP F + A++ YN RDRRFGGL +
Sbjct: 182 SGEQRLSNYLLWQLAYAEFYFTDVPWPAFDKNELKKAIDAYNKRDRRFGGLKE 234
>gi|291536045|emb|CBL09157.1| undecaprenyl diphosphate synthase [Roseburia intestinalis M50/1]
Length = 237
Score = 243 bits (619), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 114/233 (48%), Positives = 158/233 (67%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ II+DGNGRWA ++G+PR GH G + + AA ++GIK LT++AFS NW R
Sbjct: 4 PQHVAIILDGNGRWAKSKGMPRNYGHTVGAKNVETVCKAAHDMGIKYLTMYAFSTENWNR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+KL++S+LK + KNN++VRVIG+ L + E E + N GL
Sbjct: 64 PEGEVAALMKLLESYLKNCIKTADKNNMRVRVIGDTTRLSARFQKQIVELEAASAKNDGL 123
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL IA NY SRDE+ RA+K + QD+E+G+ +++ L A YLDT+ +PDPDL+IRT G
Sbjct: 124 NLQIAINYGSRDEMIRAMKKMCQDMENGTRQVSELNEDLFASYLDTAGIPDPDLLIRTSG 183
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
E+RLS++LLWQ+AYSEF F WPDF +E A+ YN RDRRFGGL+++
Sbjct: 184 EQRLSNYLLWQLAYSEFYFTDVPWPDFGKEELEKAVEAYNKRDRRFGGLAEEA 236
>gi|331090949|ref|ZP_08339791.1| di-trans,poly-cis-decaprenylcistransferase [Lachnospiraceae
bacterium 2_1_46FAA]
gi|330405171|gb|EGG84707.1| di-trans,poly-cis-decaprenylcistransferase [Lachnospiraceae
bacterium 2_1_46FAA]
Length = 236
Score = 243 bits (619), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 112/232 (48%), Positives = 155/232 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI II+DGNGRWA A+G+PR GH +G + I A ++G+K LT++AFS NW R
Sbjct: 4 PQHIAIILDGNGRWAKAKGMPRNYGHAQGSKNVERICEEAYKMGVKYLTVYAFSTENWSR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL+++++K + KN +KVRV+G++ LDDDI ++E E T N GL
Sbjct: 64 PKEEVDALMKLLRNYMKTCLKTAAKNRMKVRVLGDKTKLDDDIRKRIEELEKATVDNDGL 123
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
N IA NY SRDE+ RA+K + D + G + D+ S+ YLDT D+PDPDL+IRT G
Sbjct: 124 NFQIALNYGSRDEMIRAMKKMAADCKEGKLEVEDISESVFEAYLDTHDIPDPDLLIRTSG 183
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E RLS++LLWQ+AY+EF F WPDF+++ A+ YN RDRRFGG ++
Sbjct: 184 ELRLSNYLLWQLAYTEFYFTDVLWPDFTKKELEKAILHYNNRDRRFGGTKEE 235
>gi|257414170|ref|ZP_04745452.2| di-trans,poly-cis-decaprenylcistransferase [Roseburia intestinalis
L1-82]
gi|257200995|gb|EEU99279.1| di-trans,poly-cis-decaprenylcistransferase [Roseburia intestinalis
L1-82]
gi|291538538|emb|CBL11649.1| undecaprenyl diphosphate synthase [Roseburia intestinalis XB6B4]
Length = 255
Score = 243 bits (619), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 114/233 (48%), Positives = 158/233 (67%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ II+DGNGRWA ++G+PR GH G + + AA ++GIK LT++AFS NW R
Sbjct: 22 PQHVAIILDGNGRWAKSKGMPRNYGHTVGAKNVETVCKAAHDMGIKYLTMYAFSTENWNR 81
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+KL++S+LK + KNN++VRVIG+ L + E E + N GL
Sbjct: 82 PEGEVAALMKLLESYLKNCIKTADKNNMRVRVIGDTTRLSARFQKQIVELEAASAKNDGL 141
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL IA NY SRDE+ RA+K + QD+E+G+ +++ L A YLDT+ +PDPDL+IRT G
Sbjct: 142 NLQIAINYGSRDEMIRAMKKMCQDMENGTRQVSELNEDLFASYLDTAGIPDPDLLIRTSG 201
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
E+RLS++LLWQ+AYSEF F WPDF +E A+ YN RDRRFGGL+++
Sbjct: 202 EQRLSNYLLWQLAYSEFYFTDVPWPDFGKEELEKAVEAYNKRDRRFGGLAEEA 254
>gi|197303246|ref|ZP_03168287.1| hypothetical protein RUMLAC_01969 [Ruminococcus lactaris ATCC
29176]
gi|197297672|gb|EDY32231.1| hypothetical protein RUMLAC_01969 [Ruminococcus lactaris ATCC
29176]
Length = 236
Score = 240 bits (612), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 110/232 (47%), Positives = 155/232 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI II+DGNGRWA ++G+PR GH +G + I A +GIK LT++AFS NW R
Sbjct: 4 PQHIAIILDGNGRWAKSKGMPRNYGHAQGSKNVERICEEAWRLGIKYLTVYAFSTENWSR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L+ L+++++K + KN++K+RVIG+ LD++I +KE E+ T N GL
Sbjct: 64 PKNEVDALMTLLRNYMKTCLKTAAKNDMKIRVIGDIEPLDENIKSRIKELEEATVNNGGL 123
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
N IA NY SRDEI+RA+K I +D G + + + YLDT D+PDPDL+IRT G
Sbjct: 124 NFTIALNYGSRDEITRAVKKIAEDCREGKINPDSITEKTVNDYLDTHDIPDPDLMIRTSG 183
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+RLS++LLWQ+AYSEF F WP F++E A+ +YN R RRFGG+ ++
Sbjct: 184 EQRLSNYLLWQLAYSEFYFTDVPWPAFTKEELIKAIEEYNHRHRRFGGVEEE 235
>gi|167746790|ref|ZP_02418917.1| hypothetical protein ANACAC_01502 [Anaerostipes caccae DSM 14662]
gi|167653750|gb|EDR97879.1| hypothetical protein ANACAC_01502 [Anaerostipes caccae DSM 14662]
Length = 235
Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 109/235 (46%), Positives = 160/235 (68%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M S P+H+ II+DGNGRWA R LPR GH +G + I+ A ++GIK LT++AFS
Sbjct: 1 MESMRVPEHVAIILDGNGRWAKKRFLPRNMGHAQGSKTVERIIEDAFDMGIKYLTVYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRRP E+ L+KL++ +LK KNN++VRVIG+ L +D+ +++ E+ +
Sbjct: 61 TENWRRPKDEVDALMKLLRDYLKTCIKRANKNNMRVRVIGDVTGLSEDLREKIEQLEEAS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NTG+N IA NY SRDE+ RA+K + D+ +G++ D+ + A+YLDT +P+PDL
Sbjct: 121 KGNTGINFTIALNYGSRDEMIRAMKKMAGDLLAGTLKKEDITEDVFAEYLDTKGIPEPDL 180
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE+RLS+F+LWQ+AY+EF F WPDF+++ A+ YN R+RRFGG+
Sbjct: 181 MIRTSGEQRLSNFMLWQLAYTEFYFTDVLWPDFNKKELKKAVEYYNGRERRFGGI 235
>gi|325661705|ref|ZP_08150328.1| di-trans,poly-cis-decaprenylcistransferase [Lachnospiraceae
bacterium 4_1_37FAA]
gi|331084702|ref|ZP_08333790.1| di-trans,poly-cis-decaprenylcistransferase [Lachnospiraceae
bacterium 9_1_43BFAA]
gi|325471958|gb|EGC75173.1| di-trans,poly-cis-decaprenylcistransferase [Lachnospiraceae
bacterium 4_1_37FAA]
gi|330410796|gb|EGG90218.1| di-trans,poly-cis-decaprenylcistransferase [Lachnospiraceae
bacterium 9_1_43BFAA]
Length = 239
Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 108/227 (47%), Positives = 153/227 (67%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI II+DGNGRWA +G+PR GH +G + I A ++G+K LT++AFS NW R
Sbjct: 4 PQHIAIILDGNGRWAKKKGMPRNYGHAQGSKNVERICEEAYKMGVKYLTVYAFSTENWNR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL+++++K + +KN +KVRVIG+ LD+DI + E E+ ++ N GL
Sbjct: 64 PKGEVDALMKLLRNYMKTCLKTAEKNRMKVRVIGDLTGLDEDIRTRILELEEASKNNDGL 123
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
N IA NY SRDEI RA++ + +D + G + + + ++ YLDT +PDPDL+IRT G
Sbjct: 124 NFQIAINYGSRDEIVRAVRTLAKDCKEGKIEAEKITEEVLESYLDTHGIPDPDLLIRTSG 183
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E RLS++LLWQ+AY+EF F WPDF++E A+ QYN RDRRFG
Sbjct: 184 ELRLSNYLLWQLAYTEFYFTDVLWPDFTKEELRKAIEQYNRRDRRFG 230
>gi|126699752|ref|YP_001088649.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile 630]
gi|254975731|ref|ZP_05272203.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile
QCD-66c26]
gi|255093118|ref|ZP_05322596.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile CIP
107932]
gi|255101271|ref|ZP_05330248.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile
QCD-63q42]
gi|255307147|ref|ZP_05351318.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile ATCC
43255]
gi|255314860|ref|ZP_05356443.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile
QCD-76w55]
gi|255517534|ref|ZP_05385210.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile
QCD-97b34]
gi|255650645|ref|ZP_05397547.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile
QCD-37x79]
gi|255656123|ref|ZP_05401532.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile
QCD-23m63]
gi|260683735|ref|YP_003215020.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile CD196]
gi|260687395|ref|YP_003218529.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile
R20291]
gi|296450445|ref|ZP_06892201.1| Di-trans,poly-cis-decaprenylcistransferase [Clostridium difficile
NAP08]
gi|296879432|ref|ZP_06903426.1| Di-trans,poly-cis-decaprenylcistransferase [Clostridium difficile
NAP07]
gi|306520572|ref|ZP_07406919.1| undecaprenyl pyrophosphate synthase [Clostridium difficile
QCD-32g58]
gi|115251189|emb|CAJ69020.1| Undecaprenyl pyrophosphate synthetase [Clostridium difficile]
gi|260209898|emb|CBA63835.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile CD196]
gi|260213412|emb|CBE05057.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile
R20291]
gi|296260706|gb|EFH07545.1| Di-trans,poly-cis-decaprenylcistransferase [Clostridium difficile
NAP08]
gi|296429578|gb|EFH15431.1| Di-trans,poly-cis-decaprenylcistransferase [Clostridium difficile
NAP07]
Length = 244
Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 111/229 (48%), Positives = 156/229 (68%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA AR LPR AGH+ G+E +IV +++G+K+LT++AFS NW+R
Sbjct: 15 PTHIAIIMDGNGRWAKARFLPRTAGHKAGVETIRDIVKECSKLGVKHLTLYAFSTENWKR 74
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L+ ++L+ L +NN+KV IG+ +L + L A++ T+ NTG+
Sbjct: 75 PKLEVDTLMNLLSTYLRNEIAELHQNNVKVTAIGDISALPKTCIRELNSAKELTKNNTGV 134
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL +A NY SR +I A+ +I ++ ESG + +++D +I YL T +PDPDL+IRT G
Sbjct: 135 NLNLALNYGSRADIKNALIDIVKNCESGKIDINNIDEDIIKNYLSTKSIPDPDLVIRTSG 194
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+RLS+FLLW+VAYSEF F +WPDF +E A+ Y RDRRFGGL
Sbjct: 195 EQRLSNFLLWEVAYSEFYFTDIHWPDFKKEELQKAIYVYQRRDRRFGGL 243
>gi|150390446|ref|YP_001320495.1| undecaprenyl diphosphate synthase [Alkaliphilus metalliredigens
QYMF]
gi|149950308|gb|ABR48836.1| undecaprenyl diphosphate synthase [Alkaliphilus metalliredigens
QYMF]
Length = 248
Score = 239 bits (611), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 109/239 (45%), Positives = 157/239 (65%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + S+ P HI IIMDGNGRWA R +PR GHR G+E +++ A+ VG++ LT+
Sbjct: 10 LYEQVKSNDIPKHIAIIMDGNGRWAKKRKMPRAFGHRAGVEALRDVIRTASNVGVEYLTL 69
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP E+S L+KL+ +L+K L +N++K+ IG+ SL ++ + +A
Sbjct: 70 YAFSTENWNRPPEEVSLLMKLLIEYLRKEVRELHENHVKITTIGDIESLPSEVRIEIGKA 129
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
T N GL++ IA NY SRDE++RA+K+I + + + + +I K+LDTS++P
Sbjct: 130 VKMTNENKGLSVNIALNYGSRDEMTRAVKSIASQLLANEISLEQISYDMIEKHLDTSNIP 189
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRT GE RLS+FLLWQ+AYSEF F YWPDF E A+N + R+RRFGG+
Sbjct: 190 DPDLLIRTSGEHRLSNFLLWQLAYSEFYFTETYWPDFKGENLLQAINDFQNRERRFGGI 248
>gi|167759672|ref|ZP_02431799.1| hypothetical protein CLOSCI_02031 [Clostridium scindens ATCC 35704]
gi|167662703|gb|EDS06833.1| hypothetical protein CLOSCI_02031 [Clostridium scindens ATCC 35704]
Length = 240
Score = 239 bits (609), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 108/232 (46%), Positives = 155/232 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ II+DGNGRWA ++G+PR GH +G + I A +G+K LT++AFS NW R
Sbjct: 4 PQHVAIILDGNGRWAKSKGMPRNYGHAQGSKNVERICEDAYRMGVKYLTVYAFSTENWSR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL+++++K + KN++KVRVIG+ LD+DI ++E + T+ N GL
Sbjct: 64 PQDEVDALMKLLRNYMKTCLKTAAKNDMKVRVIGDISRLDEDIRTRIQELTEATKDNGGL 123
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
N IA NY SRDEI RA++ + D G + +D ++ YLDT D+PDPDL+IRT G
Sbjct: 124 NFQIAINYGSRDEILRAVRRLAGDCVEGRLAPGQIDEAVFESYLDTHDIPDPDLLIRTSG 183
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E RLS++LLWQ+AY+EF F WPDF++E A+ YN RDRR+GG+ ++
Sbjct: 184 ELRLSNYLLWQLAYTEFYFTDVPWPDFTKEELAKAIEHYNARDRRYGGVKEE 235
>gi|300023425|ref|YP_003756036.1| undecaprenyl diphosphate synthase [Hyphomicrobium denitrificans
ATCC 51888]
gi|299525246|gb|ADJ23715.1| undecaprenyl diphosphate synthase [Hyphomicrobium denitrificans
ATCC 51888]
Length = 252
Score = 238 bits (608), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 109/234 (46%), Positives = 156/234 (66%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+PP H+ IIMDGNGRWA RGLPR GHR+G+E V A E+ I LTIF+FS NW
Sbjct: 16 APPRHVAIIMDGNGRWAKERGLPRTLGHRQGVEAVRRAVRTAIELNITYLTIFSFSSENW 75
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP E+ +L+ L+K F+++ L + + +RVIG R +D ++ ++ +A T+ N
Sbjct: 76 KRPADEVDDLMGLMKRFIRRDLVELHEAGVCIRVIGQRQHVDSELTKLIDDAVALTKGND 135
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
L L IAFNY SR EI+ A + + ++ +G++ + +A LDTS +PDPDL+IRT
Sbjct: 136 RLTLVIAFNYGSRSEIAGAARKLAAEVAAGTLDPSAITVERMANALDTSGIPDPDLLIRT 195
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE RLS+FLLWQ AYSEFVF+ YWPDF + F A++++ R+RRFGGL+++
Sbjct: 196 SGEMRLSNFLLWQTAYSEFVFLDCYWPDFDKAAFEGAIHEFRSRERRFGGLTQR 249
>gi|158320549|ref|YP_001513056.1| undecaprenyl diphosphate synthase [Alkaliphilus oremlandii OhILAs]
gi|158140748|gb|ABW19060.1| undecaprenyl diphosphate synthase [Alkaliphilus oremlandii OhILAs]
Length = 251
Score = 238 bits (607), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 111/238 (46%), Positives = 159/238 (66%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
++S+ S P HI IIMDGNGRW R LPR GH+ G+E +++ A+ +G++ LT++
Sbjct: 14 ISSINMGSLPQHIAIIMDGNGRWGTERMLPRNLGHKAGVEALRDVIKTASNIGVQYLTLY 73
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RPVSE+S L+KL+ +L+K L +NN+K+++IG+ L +++ +++A
Sbjct: 74 AFSTENWKRPVSEVSFLMKLLIEYLRKEIAELHENNVKIQIIGDVAGLPKEVIKEIEKAT 133
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T N GL + IA NY SR EI+ AIK I + +E+ + S D+D SL+ +L T+ PD
Sbjct: 134 IKTMNNQGLCVNIALNYGSRAEITDAIKKIAKMVENQEIQSDDIDESLVHSFLYTAATPD 193
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDL+IRT GE RLS+FLLWQ AYSE F YWPDF+ E A+ Y R RRFGG+
Sbjct: 194 PDLLIRTSGELRLSNFLLWQCAYSELWFTDVYWPDFTGEHLIMAITDYQNRKRRFGGI 251
>gi|153853431|ref|ZP_01994840.1| hypothetical protein DORLON_00829 [Dorea longicatena DSM 13814]
gi|149754217|gb|EDM64148.1| hypothetical protein DORLON_00829 [Dorea longicatena DSM 13814]
Length = 240
Score = 238 bits (607), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 112/232 (48%), Positives = 155/232 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ II+DGNGRWA A+G+PR GH +G + I A +GIK LT++AFS NW R
Sbjct: 4 PQHVAIILDGNGRWAKAKGMPRNYGHAQGSKNVERICEEAWRMGIKYLTVYAFSTENWNR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+KL+++++K + KN++KVRVIG+ LD+DI + E E+ T+ N GL
Sbjct: 64 PDDEVNALMKLLRNYMKTCLKTAAKNDMKVRVIGDITRLDEDIQKRILELEEATKNNGGL 123
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
N IA NY SRDE+ RAI+ I +D G V ++ +YLDT +PDPDL+IRT G
Sbjct: 124 NFQIAINYGSRDEMIRAIRKIAKDCVDGKVDPAEIKEETFEQYLDTKGIPDPDLMIRTSG 183
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E RLS++LLWQ+AY+EF F WPDFS+E A+ YN RDRR+GG+ ++
Sbjct: 184 ELRLSNYLLWQLAYTEFYFTDVPWPDFSKEELEKAIETYNHRDRRYGGVKEE 235
>gi|238916788|ref|YP_002930305.1| undecaprenyl pyrophosphate synthetase [Eubacterium eligens ATCC
27750]
gi|238872148|gb|ACR71858.1| undecaprenyl pyrophosphate synthetase [Eubacterium eligens ATCC
27750]
Length = 244
Score = 237 bits (605), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 106/232 (45%), Positives = 153/232 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +I+DGNGRWA R LPR GH +G +V +++ E+G+K T++AFS NW+R
Sbjct: 13 PGHVAVILDGNGRWAKKRHLPRTMGHVQGSKVVEDMLYVVDELGVKYFTVYAFSTENWKR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+S L+ +++++LK KNN++ RVIG + L DI+ + E++TR NTGL
Sbjct: 73 STEEVSTLMGILRTYLKDCVKKSMKNNVRCRVIGRKDELSQDIIDSINNLEEKTRNNTGL 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
N IA NY RDEI+RA++ I + GS+ D+D I+ LDT ++PDPDL+IRT G
Sbjct: 133 NFTIAINYGGRDEITRAVRKIAGKVSEGSLKPEDIDEDTISNNLDTWELPDPDLLIRTSG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+RLS++L WQ+AY+EF F YWPDF RE A +YN +RRFGG+ ++
Sbjct: 193 EQRLSNYLCWQLAYTEFYFTDIYWPDFDREELIKAFEKYNKTERRFGGVKEE 244
>gi|56696547|ref|YP_166904.1| undecaprenyl diphosphate synthase [Ruegeria pomeroyi DSS-3]
gi|56678284|gb|AAV94950.1| undecaprenyl diphosphate synthase [Ruegeria pomeroyi DSS-3]
Length = 243
Score = 237 bits (605), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 109/232 (46%), Positives = 148/232 (63%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P H+ IIMDGNGRWA ARG PR GH G E+V A ++GIK LTIFAFS NW
Sbjct: 11 SGPRHVAIIMDGNGRWAQARGRPRLFGHHAGARRVREVVEACPQLGIKYLTIFAFSTENW 70
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+R E++ L+ L + ++ K +L ++VR IG+R+ LD ++ ++ E+QTR N
Sbjct: 71 KRTQVEVAGLMSLFRRYIAKETRALHARGVRVRFIGDRVRLDAKLIALMDTLEEQTREND 130
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
G+ L IA NY RDE++RA + + +D+ G + DVD + +YLDT +PDPDL+IRT
Sbjct: 131 GVQLTIALNYGGRDEVARATRRLARDVAEGRLKPEDVDEETLPRYLDTRVLPDPDLVIRT 190
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
GE R+S+FLLWQ AYSE+ FI WPDF+ E Y RDRRFG ++
Sbjct: 191 SGEARISNFLLWQSAYSEYEFIDTLWPDFTAEELARLCQSYGSRDRRFGAVT 242
>gi|291523273|emb|CBK81566.1| undecaprenyl diphosphate synthase [Coprococcus catus GD/7]
Length = 245
Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 152/229 (66%), Gaps = 3/229 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ II+DGNGRWA R +PR GH +G + E+ A ++GIK T++AFS NW+R
Sbjct: 20 PEHVAIILDGNGRWAKKRFMPRNYGHMQGAKTVEEMCEVARDLGIKYFTVYAFSTENWKR 79
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE+ L+KL++ ++ KNN++VRVIG++ L +DI + + E + NTGL
Sbjct: 80 PQSEVDALMKLLRKYMVDSLERTAKNNMRVRVIGDKTGLSEDIQKSIADVETASAGNTGL 139
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
N IA NY SRDE+ RA+K + D G ++ +L YLDT+ +PDPDL+IRT G
Sbjct: 140 NFTIAINYGSRDEMIRAMKKMLAD---GHTNPGEMSEALFEHYLDTAGMPDPDLVIRTSG 196
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+R+S+FLLWQ+AYSEF F P WPD+++E A+ Y+ RDRRFGG+
Sbjct: 197 EQRVSNFLLWQMAYSEFYFTPVLWPDYNKETMIEAIRAYSKRDRRFGGV 245
>gi|288870962|ref|ZP_06115928.2| di-trans,poly-cis-decaprenylcistransferase [Clostridium hathewayi
DSM 13479]
gi|288865249|gb|EFC97547.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium hathewayi
DSM 13479]
Length = 279
Score = 237 bits (604), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 108/230 (46%), Positives = 148/230 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
PDH+ II+DGNGRWA RGLPR GH++G V V AA +GIK LT++ FS NW+R
Sbjct: 50 PDHVAIILDGNGRWAKKRGLPRSMGHKEGCVVVERTVEDAARIGIKYLTVYGFSTENWKR 109
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L++L + ++ + K NN++VR+IG R D DI+ + E +T NTGL
Sbjct: 110 SGEEVGALMQLFRYYMVRLLKIAKTNNVRVRMIGERSRFDQDIIDGINRLERETENNTGL 169
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
IA NY RDEI RA + I +D G + +D ++ + YLDT+++PDPDL+IRT G
Sbjct: 170 TFVIAVNYGGRDEIVRAARKIMKDTADGKITPDQMDEAVFSSYLDTAEIPDPDLLIRTSG 229
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E RLS++LLWQ+AY+E YWPDF++E A+ YN RDRRFGG+
Sbjct: 230 ELRLSNYLLWQLAYTELYVTDCYWPDFNKEELKKAIAAYNSRDRRFGGVK 279
>gi|302872258|ref|YP_003840894.1| undecaprenyl diphosphate synthase [Caldicellulosiruptor obsidiansis
OB47]
gi|302575117|gb|ADL42908.1| undecaprenyl diphosphate synthase [Caldicellulosiruptor obsidiansis
OB47]
Length = 248
Score = 237 bits (604), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/231 (50%), Positives = 149/231 (64%), Gaps = 1/231 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA RGLPR AGHR G + EIV A E+G+K LT++AFS NW+R
Sbjct: 18 PQHIAIIMDGNGRWAKKRGLPRSAGHRFGAQKLKEIVLFADEIGLKYLTVYAFSTENWKR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSL-KKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
P E+ L+ L++ F +L K I++RVIG+ LD DI + AE++T+ G
Sbjct: 78 PKDEVENLMNLLREFFDTEIENLINKTQIRIRVIGDISKLDKDIQERIVSAEERTKDKRG 137
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L + IA NY R EI A+KN+ DI+SG + DVD L KYL T D+PDPDL+IR
Sbjct: 138 LCVVIALNYGGRQEIINAVKNLALDIKSGKIDIEDVDEDLFKKYLYTKDIPDPDLLIRPS 197
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
GE R+S+FLLWQ++Y+EF F WPDF +E A+ Y RDRRFGG+
Sbjct: 198 GEMRVSNFLLWQISYTEFWFSNVLWPDFKKEHLLKAIEDYQKRDRRFGGVK 248
>gi|328543715|ref|YP_004303824.1| Undecaprenyl pyrophosphate synthetase 2 (UPP synthetase 2)
(Di-trans,poly-cis-decaprenylcistransferase 2)
(Undecaprenyl diphosphate synthase 2) (UDS 2)
[polymorphum gilvum SL003B-26A1]
gi|326413459|gb|ADZ70522.1| Undecaprenyl pyrophosphate synthetase 2 (UPP synthetase 2)
(Di-trans,poly-cis-decaprenylcistransferase 2)
(Undecaprenyl diphosphate synthase 2) (UDS 2)
[Polymorphum gilvum SL003B-26A1]
Length = 231
Score = 237 bits (604), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/229 (50%), Positives = 153/229 (66%)
Query: 14 IGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVS 73
+ +IMDGNGRWA ARGLPR GHR G+E + AAEVGI +T+F+FS NW RP
Sbjct: 1 MALIMDGNGRWAQARGLPRTEGHRHGLEALRATIRRAAEVGIDYVTVFSFSSENWARPDG 60
Query: 74 EISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLF 133
E+S L+ L++ F+++ + + NI+VRVIG R L+ I +L+EAE TR NTG+ L
Sbjct: 61 EVSYLMGLLRRFVQRDLSEIHQANIRVRVIGAREGLEPGIRGLLEEAETLTRANTGMTLV 120
Query: 134 IAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKR 193
+AFNY RDE+ RA+K + +D+ G + + I++ LDT+ +PDPDLIIRT GE R
Sbjct: 121 VAFNYGGRDELVRAVKALAEDVAQGRLRPEAITEDDISRRLDTAGIPDPDLIIRTSGELR 180
Query: 194 LSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
LS+FLLWQ AY+EF F P WPDF F AL + RDRR+GGLS K
Sbjct: 181 LSNFLLWQAAYTEFYFSPVLWPDFDAAAFDDALTAFAERDRRYGGLSAK 229
>gi|312127158|ref|YP_003992032.1| undecaprenyl diphosphate synthase [Caldicellulosiruptor
hydrothermalis 108]
gi|311777177|gb|ADQ06663.1| undecaprenyl diphosphate synthase [Caldicellulosiruptor
hydrothermalis 108]
Length = 248
Score = 237 bits (604), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 115/231 (49%), Positives = 151/231 (65%), Gaps = 1/231 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA RGLPR AGHR G + EIV A E+G+K LT++AFS NW+R
Sbjct: 18 PQHIAIIMDGNGRWARKRGLPRSAGHRFGAQKLKEIVLFADEIGLKYLTVYAFSTENWKR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSL-KKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
P E+ L+ L++ F +L K I++RVIG+ LD DI + AE++T+ G
Sbjct: 78 PKEEVDNLMNLLREFFDTEIENLINKTQIRIRVIGDISKLDKDIQERIVSAEERTKDKKG 137
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L + IA NY +R EI A+KN+ DI+SG + DVD +L KYL T D+PDPDL+IR
Sbjct: 138 LCVVIALNYGARQEIINAVKNLALDIKSGKIDIEDVDENLFKKYLYTKDIPDPDLLIRPS 197
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
GE R+S+FLLWQ++Y+EF F WPDF +E A+ Y R+RRFGG+
Sbjct: 198 GEMRVSNFLLWQISYTEFWFSNVLWPDFKKEHLLKAIEDYQRRERRFGGVK 248
>gi|83592925|ref|YP_426677.1| undecaprenyl pyrophosphate synthetase [Rhodospirillum rubrum ATCC
11170]
gi|83575839|gb|ABC22390.1| Undecaprenyl pyrophosphate synthetase [Rhodospirillum rubrum ATCC
11170]
Length = 244
Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 106/227 (46%), Positives = 157/227 (69%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA ARGLPR AGH++G E +V AA E+GI +LT+F FS NW+RP
Sbjct: 18 HVAIIMDGNGRWAHARGLPRTAGHKRGAESVRRVVEAAPELGISHLTLFGFSSENWKRPE 77
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
EIS+L+ L++ +L+ LK+N +++RVIG R DI+ ++++ E TR N L+L
Sbjct: 78 GEISDLMGLLRLYLRNEIRDLKRNGVRLRVIGRRERFSRDIVALIEDGESDTRDNDRLHL 137
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA NY R EI+ A + + +++ +G + +D ++ + L T D+PDPD+++RT GE+
Sbjct: 138 TIALNYGGRQEIADAARALAREVAAGRLDPEAIDEEVLGQRLLTDDLPDPDVLVRTSGEQ 197
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
R+S+FLLWQ+AYSE VF P WP+FSR+ A+ ++ R+RRFGG+
Sbjct: 198 RISNFLLWQIAYSELVFSPVLWPEFSRDDLAAAVADFHQRERRFGGV 244
>gi|291542737|emb|CBL15847.1| Undecaprenyl pyrophosphate synthetase [Ruminococcus bromii L2-63]
Length = 248
Score = 236 bits (602), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 109/229 (47%), Positives = 155/229 (67%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA RGLPR AGHR+G + F I +++GIK LT++AFS NW+R
Sbjct: 20 PSHIGIIMDGNGRWAKKRGLPRKAGHRQGAKTFRTITRYCSDIGIKYLTVYAFSTENWKR 79
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L KS+L + K ++I V+ IG++ +D++ ++ E E+ ++ G+
Sbjct: 80 PQEEVDALMSLFKSYLNEALEDFKDDSIVVKFIGDKSGFNDELRELMIENEESSKDRDGM 139
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY SRDEI RA++NI +D+ +G + S D+ +L + YL T+ PDPDLIIR G
Sbjct: 140 VLNIAMNYGSRDEIVRAVRNISEDVRNGKISSDDITENLFSNYLYTAGQPDPDLIIRPSG 199
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+FLLWQ AY+EFV + + WPDF + AL Y+ R+RR+GG+
Sbjct: 200 EYRISNFLLWQSAYTEFVIMNKLWPDFQKSDLDEALKIYSSRNRRYGGV 248
>gi|163747133|ref|ZP_02154489.1| undecaprenyl diphosphate synthase [Oceanibulbus indolifex HEL-45]
gi|161379694|gb|EDQ04107.1| undecaprenyl diphosphate synthase [Oceanibulbus indolifex HEL-45]
Length = 245
Score = 236 bits (602), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/229 (48%), Positives = 147/229 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG PR GH G + EIV A +VG++ LTIFAFS NW+R
Sbjct: 15 PRHVAIIMDGNGRWATQRGRPRLFGHHAGAKRVREIVEACPDVGVEYLTIFAFSTENWKR 74
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E++ L+ L + ++ K SL + +VR IG+R LDD ++ ++ E ED T NT +
Sbjct: 75 TQVEVAGLMSLFRRYISKEMRSLSEYGARVRFIGDRDRLDDKLIKLMGELEDHTAHNTRI 134
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL IA NY RDE++RA + QD+ SG + VD + +YLDT +PDPDL+IRT G
Sbjct: 135 NLTIALNYGGRDEVARATHRLAQDVASGKLDPDSVDEETLPRYLDTHVLPDPDLVIRTSG 194
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+FLLWQ AY+E+ FI WPDF+RE F Y RDRRFG +
Sbjct: 195 EARISNFLLWQSAYAEYEFIDTLWPDFTREEFARLCAAYGGRDRRFGAV 243
>gi|312793073|ref|YP_004025996.1| undecaprenyl diphosphate synthase [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312876746|ref|ZP_07736725.1| undecaprenyl diphosphate synthase [Caldicellulosiruptor
lactoaceticus 6A]
gi|311796477|gb|EFR12827.1| undecaprenyl diphosphate synthase [Caldicellulosiruptor
lactoaceticus 6A]
gi|312180213|gb|ADQ40383.1| undecaprenyl diphosphate synthase [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 248
Score = 236 bits (602), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 115/231 (49%), Positives = 151/231 (65%), Gaps = 1/231 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA RGLPR AGHR G + EIV A E+G+K LT++AFS NW+R
Sbjct: 18 PQHIAIIMDGNGRWARKRGLPRSAGHRFGAQKLKEIVLFADEIGLKYLTVYAFSTENWKR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSL-KKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
P E+ L+ L++ F +L K I++RVIG+ LD DI + AE++T+ G
Sbjct: 78 PKEEVDNLMNLLREFFDTEIENLINKTQIRIRVIGDISKLDKDIQERIVSAEERTKDKRG 137
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L + IA NY +R EI A+KN+ DI+SG + DVD +L KYL T D+PDPDL+IR
Sbjct: 138 LCVVIALNYGARQEIINAVKNLALDIKSGKIDIEDVDENLFKKYLYTRDIPDPDLLIRPS 197
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
GE R+S+FLLWQ++Y+EF F WPDF +E A+ Y R+RRFGG+
Sbjct: 198 GEMRVSNFLLWQISYTEFWFSNVLWPDFKKEHLLKAIEDYQKRERRFGGVK 248
>gi|152976189|ref|YP_001375706.1| undecaprenyl diphosphate synthase [Bacillus cereus subsp. cytotoxis
NVH 391-98]
gi|152024941|gb|ABS22711.1| undecaprenyl diphosphate synthase [Bacillus cytotoxicus NVH 391-98]
Length = 258
Score = 236 bits (602), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 108/229 (47%), Positives = 153/229 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R +PR AGH +G++V +I A+++ +K LT++AFS NW+R
Sbjct: 30 PEHIAIIMDGNGRWAKKRAMPRIAGHHEGMQVVKKITKFASKLDVKVLTLYAFSTENWKR 89
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL + FL L + N++VRVIG + L +++A + T+ NTGL
Sbjct: 90 PKKEVEYLMKLPEEFLGTFLPELIEENVQVRVIGQKDRLPMHTRRAMEKAMEDTKENTGL 149
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY SRDEI A++++ +D E G V S D++ +I+ YL TS +PDPDL+IRT G
Sbjct: 150 ILNFALNYGSRDEIVSAVQHMMKDSEEGKVRSEDINEEMISSYLMTSALPDPDLLIRTSG 209
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+F+LWQ+AY+E F YWPDF+ E HA+ + R RRFGG+
Sbjct: 210 EVRISNFMLWQIAYTELWFTNVYWPDFTEEHLLHAITDFQQRGRRFGGV 258
>gi|229918659|ref|YP_002887305.1| undecaprenyl diphosphate synthase [Exiguobacterium sp. AT1b]
gi|229470088|gb|ACQ71860.1| undecaprenyl diphosphate synthase [Exiguobacterium sp. AT1b]
Length = 245
Score = 236 bits (602), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 114/231 (49%), Positives = 153/231 (66%), Gaps = 1/231 (0%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P+H+ IIMDGNGRWA RGLPR GHR+G++ E V A E+GI++LT++AFS NW
Sbjct: 16 SVPEHVAIIMDGNGRWAKKRGLPRIMGHREGMKSIREAVRTAQELGIRSLTLYAFSTENW 75
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+S L+KL K FL+ L + N++V V G+ L + + EA ++T NT
Sbjct: 76 TRPEEEVSFLMKLPKQFLETDLKELHEQNVRVLVAGDTSKLPRETREAVDEARERTVANT 135
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GLNL A NY RDE+ +A+++I D++SGSV + D+D +I + L T V D DL+IRT
Sbjct: 136 GLNLVFALNYGGRDELVQAMRSIAVDVQSGSVRADDIDDRMIGERLMTH-VQDVDLVIRT 194
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE+RLS+FLLWQ AY+E F WP+F RE F A+ YN R RRFGG+
Sbjct: 195 SGEQRLSNFLLWQSAYAELHFTEVLWPEFKREHFVEAIESYNARTRRFGGV 245
>gi|86138422|ref|ZP_01056996.1| undecaprenyl diphosphate synthase [Roseobacter sp. MED193]
gi|85824947|gb|EAQ45148.1| undecaprenyl diphosphate synthase [Roseobacter sp. MED193]
Length = 252
Score = 236 bits (602), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 111/233 (47%), Positives = 150/233 (64%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
SS P H+ IIMDGNGRWA ARG PR GH G E+V G+K LTIFAFS N
Sbjct: 19 SSGPRHVAIIMDGNGRWAQARGRPRLFGHHAGARRVREVVECCPRFGVKYLTIFAFSTEN 78
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W+R EIS L+ L + ++ K +L N++VR IG+RL LD ++ ++ E E +T+ N
Sbjct: 79 WKRTQVEISGLMSLFRRYISKEMKALAAQNVRVRFIGDRLRLDAKLVQLMDELEHETKGN 138
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
G++L IA NY RDE++RA K + QD+ SG + DV+ + +YLDT +PDPDL+IR
Sbjct: 139 DGIHLTIALNYGGRDEVARATKRLAQDVASGQLRPEDVNEETLPRYLDTHVLPDPDLVIR 198
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
T GE R+S+FLLWQ AY+E+ FI WPDF+ E ++ R+RRFG +S
Sbjct: 199 TSGEARISNFLLWQSAYAEYEFIDTLWPDFTAEELGRLCLKFGARERRFGAVS 251
>gi|283798095|ref|ZP_06347248.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium sp. M62/1]
gi|291074239|gb|EFE11603.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium sp. M62/1]
gi|295091733|emb|CBK77840.1| undecaprenyl diphosphate synthase [Clostridium cf. saccharolyticum
K10]
Length = 240
Score = 236 bits (601), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 108/228 (47%), Positives = 149/228 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +I+DGNGRWA RGLPR AGH++G + V AA +GI LT++ FS NW+R
Sbjct: 11 PRHVALILDGNGRWAKKRGLPRTAGHKQGCVTVEKTVEDAARLGIDYLTVYGFSTENWKR 70
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
V E+ L++L + +LK+ + NN++V++IG+R D DI+ + E +T NTG+
Sbjct: 71 SVEEVGALMQLFRYYLKRLLKIARVNNVRVKMIGDRTRFDQDIIEGIDRLERETADNTGM 130
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
IA NY RDEI RA+K + +D +SG + V +A YLDT+ +PDPDL+IRT G
Sbjct: 131 TFVIAVNYGGRDEIRRAVKQMMRDAKSGILDPDAVTEDTVASYLDTAGIPDPDLLIRTSG 190
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E RLS++LLWQ+AYSE WPDF+RE A+ QYN R+RRFGG
Sbjct: 191 EIRLSNYLLWQLAYSEIYITDCLWPDFNREELVKAIAQYNTRERRFGG 238
>gi|222529796|ref|YP_002573678.1| undecaprenyl diphosphate synthase [Caldicellulosiruptor bescii DSM
6725]
gi|222456643|gb|ACM60905.1| undecaprenyl diphosphate synthase [Caldicellulosiruptor bescii DSM
6725]
Length = 248
Score = 236 bits (601), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 114/231 (49%), Positives = 151/231 (65%), Gaps = 1/231 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA RGLPR AGHR G + EIV A E+G+K LT++AFS NW+R
Sbjct: 18 PQHIAIIMDGNGRWAKKRGLPRSAGHRFGAQKLKEIVLFADEIGLKYLTVYAFSTENWKR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSL-KKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
P E+ L+ L++ F +L K I++RVIG+ LD DI + AE++T+ G
Sbjct: 78 PKEEVENLMNLLREFFDTEIENLIHKTQIRIRVIGDISKLDKDIQERIVSAEERTKDKRG 137
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L + IA NY +R EI A+KN+ DI+SG + DVD L KYL T+++PDPDL+IR
Sbjct: 138 LCVVIALNYGARQEIINAVKNLALDIKSGKIDIEDVDEDLFKKYLYTNEIPDPDLLIRPS 197
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
GE R+S+FLLWQ++Y+EF F WPDF +E A+ Y R+RRFGG+
Sbjct: 198 GEMRVSNFLLWQISYTEFWFSNVLWPDFKKEHLLKAIEDYQKRERRFGGVK 248
>gi|312621979|ref|YP_004023592.1| undecaprenyl diphosphate synthase [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202446|gb|ADQ45773.1| undecaprenyl diphosphate synthase [Caldicellulosiruptor
kronotskyensis 2002]
Length = 248
Score = 236 bits (601), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 114/231 (49%), Positives = 151/231 (65%), Gaps = 1/231 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA RGLPR AGHR G + EIV A E+G+K LT++AFS NW+R
Sbjct: 18 PQHIAIIMDGNGRWAKKRGLPRSAGHRFGAQKLKEIVLFADEIGLKYLTVYAFSTENWKR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSL-KKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
P E+ L+ L++ F +L K I++RVIG+ LD DI + AE++T+ G
Sbjct: 78 PKEEVDNLMNLLREFFDTEIENLIHKTQIRIRVIGDISKLDKDIQERIVSAEERTKDKKG 137
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L + IA NY +R EI A+KN+ DI+SG + DVD +L KYL T D+PDPDL+IR
Sbjct: 138 LCVVIALNYGARQEIINAVKNLALDIKSGKIDIEDVDENLFKKYLYTKDIPDPDLLIRPS 197
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
GE R+S+FLLWQ++Y+EF F WPDF ++ A+ Y R+RRFGG+
Sbjct: 198 GEMRVSNFLLWQISYTEFWFSNVLWPDFKKDHLLKAIEDYQKRERRFGGVK 248
>gi|291547839|emb|CBL20947.1| undecaprenyl diphosphate synthase [Ruminococcus sp. SR1/5]
Length = 235
Score = 235 bits (600), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 109/232 (46%), Positives = 153/232 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI II+DGNGRWA RG+PR GH KG I ++G+K LT++AFS NW+R
Sbjct: 4 PNHIAIILDGNGRWAKERGMPRTYGHVKGCANLENICYDIKDLGVKYLTVYAFSTENWKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+KL + +LKK KKNN+K++VIG+ + DI ++E E+ ++ G+
Sbjct: 64 SREEVEALMKLFRGYLKKCIKISKKNNMKMKVIGDVTAFAPDIQQSVRELEEYSKDFDGI 123
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY SRDEI R ++ + QD++ G V + I YLDT+ VPDPDL+IRT G
Sbjct: 124 YFQLALNYGSRDEIRRGMQKMAQDVKDGKVEPDGITEDTIESYLDTAGVPDPDLLIRTSG 183
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+RLS+FLLWQ+AYSEF F P WPDF++E A+ +YN RDRR+GG+ ++
Sbjct: 184 EQRLSNFLLWQLAYSEFYFTPVAWPDFNKEELIKAIEKYNQRDRRYGGVKEE 235
>gi|84500822|ref|ZP_00999057.1| undecaprenyl diphosphate synthase [Oceanicola batsensis HTCC2597]
gi|84390889|gb|EAQ03307.1| undecaprenyl diphosphate synthase [Oceanicola batsensis HTCC2597]
Length = 242
Score = 235 bits (599), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 151/229 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG PR GH G + EIV A ++G++ LTIF FS NW+R
Sbjct: 12 PRHVAIIMDGNGRWATMRGRPRLFGHHAGAKRVREIVEACPDLGVEYLTIFGFSTENWKR 71
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E++ L+ L + +++K +L+ ++++VR IG+R LD + ++ E E+ T G
Sbjct: 72 TQIEVAGLMSLFRRYIQKEARALRAHDVRVRFIGDRPGLDPKLQALMDELEELTAQCHGT 131
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL IA NY RDE++RA + + +D+ +G +C DVD + KYLDT +PDPDL+IRT G
Sbjct: 132 NLTIALNYGGRDEVARATRRLAEDVAAGRLCPGDVDVETLPKYLDTRVLPDPDLVIRTSG 191
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+FLLWQ AY+E+ FI WPDFS E+F + Y RDRR+GG+
Sbjct: 192 EARISNFLLWQSAYAEYEFIDTLWPDFSEEVFARLIASYAGRDRRYGGV 240
>gi|149202143|ref|ZP_01879116.1| undecaprenyl diphosphate synthase [Roseovarius sp. TM1035]
gi|149144241|gb|EDM32272.1| undecaprenyl diphosphate synthase [Roseovarius sp. TM1035]
Length = 247
Score = 235 bits (599), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 111/239 (46%), Positives = 147/239 (61%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + P H+ IIMDGNGRWA RG PR GH G EIV + +G+K LTI
Sbjct: 7 MAGKSAPAEGPRHVAIIMDGNGRWAQKRGRPRLFGHHAGARRVREIVQSCPGLGVKYLTI 66
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW+R +E++ L+ L + ++ K + N++VR IG+R LD + ++ EA
Sbjct: 67 FAFSTENWKRTQTEVAGLMSLFRRYIMKEMQEFVRENVQVRFIGDRPRLDAKLRGLMDEA 126
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E T TG NL IA NY RDE+SRA K + D+ G + DVD + +YLDT +P
Sbjct: 127 EAMTAHCTGTNLTIALNYGGRDEVSRATKRLAIDVAEGRLRPEDVDEETLPRYLDTCVLP 186
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRT GE R+S+FLLWQ AY+E+ FI WPDF+ ++F L QY RDRRFG +
Sbjct: 187 DPDLVIRTSGEARISNFLLWQSAYAEYEFIDTLWPDFTPDVFARLLAQYGARDRRFGAV 245
>gi|261419453|ref|YP_003253135.1| undecaprenyl pyrophosphate synthase [Geobacillus sp. Y412MC61]
gi|297530572|ref|YP_003671847.1| undecaprenyl diphosphate synthase [Geobacillus sp. C56-T3]
gi|319766268|ref|YP_004131769.1| undecaprenyl diphosphate synthase [Geobacillus sp. Y412MC52]
gi|261375910|gb|ACX78653.1| undecaprenyl diphosphate synthase [Geobacillus sp. Y412MC61]
gi|297253824|gb|ADI27270.1| undecaprenyl diphosphate synthase [Geobacillus sp. C56-T3]
gi|317111134|gb|ADU93626.1| undecaprenyl diphosphate synthase [Geobacillus sp. Y412MC52]
Length = 257
Score = 235 bits (599), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 112/232 (48%), Positives = 153/232 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA R LPR AGH +G++V +I A E+GI+ L+++AFS NW+R
Sbjct: 26 PNHVAIIMDGNGRWAKKRALPRAAGHYEGMQVVRKITRFANELGIQILSLYAFSTENWKR 85
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE+ L+KL + FL L N+KV+VIG+ +L D +++A +T NTGL
Sbjct: 86 PKSEVDYLMKLPEQFLTTFLPELVAENVKVQVIGHTEALPDHTRRAVEKAVKETSGNTGL 145
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY SR EI+ A+K I +D+E G + D+ LI+ YL TS + DPDL+IRT G
Sbjct: 146 VLNFALNYGSRAEITAAVKQIAKDVERGMLAPEDITEPLISSYLMTSGLADPDLLIRTSG 205
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E RLS+F+LWQ+AY+E F WPDF+ + F A+ Y RDRRFGG+S +
Sbjct: 206 EIRLSNFMLWQLAYTELWFTDVLWPDFTEQHFLEAIAAYQRRDRRFGGVSAR 257
>gi|149915216|ref|ZP_01903744.1| undecaprenyl diphosphate synthase [Roseobacter sp. AzwK-3b]
gi|149810937|gb|EDM70776.1| undecaprenyl diphosphate synthase [Roseobacter sp. AzwK-3b]
Length = 241
Score = 235 bits (599), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 114/239 (47%), Positives = 151/239 (63%), Gaps = 4/239 (1%)
Query: 5 MMSSSPPD----HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M +SPP H+ IIMDGNGRWA ARG PR GH G +IV+A E+G+ LTI
Sbjct: 1 MARNSPPTGGPRHVAIIMDGNGRWAQARGRPRLFGHHAGARRVRDIVSACPELGVDYLTI 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW+R +E+S L+ L + ++ K K N++VR IG+R LD + ++ EA
Sbjct: 61 FAFSTENWKRTQTEVSGLMALFRRYIIKEMQEFVKENVRVRFIGDRRRLDRSLQDLMDEA 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E T T LNL IA NY RDE++RA K + QD+ G + VD + KYLDT +P
Sbjct: 121 ETMTSHCTRLNLTIALNYGGRDEVARATKRLAQDVALGRLDPEAVDEETLPKYLDTCVLP 180
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DP+L+IRT GE R+S+FLLWQ AYSE+ FI WPDF++++F L Y R+RRFG +
Sbjct: 181 DPELVIRTSGEARISNFLLWQSAYSEYEFIDTLWPDFTKDIFTDVLRSYGARERRFGAV 239
>gi|56419788|ref|YP_147106.1| undecaprenyl pyrophosphate synthase [Geobacillus kaustophilus
HTA426]
gi|73920260|sp|Q5L0J8|UPPS_GEOKA RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|56379630|dbj|BAD75538.1| undecaprenyl pyrophosphate synthetase (UPP synthetase) [Geobacillus
kaustophilus HTA426]
Length = 257
Score = 234 bits (598), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 112/232 (48%), Positives = 153/232 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA R LPR AGH +G++V +I A E+GI+ L+++AFS NW+R
Sbjct: 26 PNHVAIIMDGNGRWAKKRALPRAAGHYEGMQVVRKITRFANELGIQILSLYAFSTENWKR 85
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE+ L+KL + FL L N+KV+VIG+ +L D +++A +T NTGL
Sbjct: 86 PKSEVDYLMKLPEQFLTTFLPELVAENVKVQVIGHTEALPDHTRRAVEKAVKETSGNTGL 145
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY SR EI+ A+K I +D+E G + D+ LI+ YL TS + DPDL+IRT G
Sbjct: 146 VLNFALNYGSRAEIAAAVKQIAKDVERGMLAPEDITEPLISSYLMTSGLADPDLLIRTSG 205
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E RLS+F+LWQ+AY+E F WPDF+ + F A+ Y RDRRFGG+S +
Sbjct: 206 EIRLSNFMLWQLAYTELWFTDVLWPDFTEQHFLEAIAAYQRRDRRFGGVSAR 257
>gi|295696147|ref|YP_003589385.1| undecaprenyl diphosphate synthase [Bacillus tusciae DSM 2912]
gi|295411749|gb|ADG06241.1| undecaprenyl diphosphate synthase [Bacillus tusciae DSM 2912]
Length = 258
Score = 234 bits (598), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 109/229 (47%), Positives = 150/229 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RGLPR AGHR G++ E+ AA E+GI+ LT++AFS NW+R
Sbjct: 18 PRHVAIIMDGNGRWAHRRGLPRVAGHRAGMKAVKEVTRAADEIGIQVLTLYAFSTENWKR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L + FL + L ++ ++VR+IG L L ++ A +TR NTGL
Sbjct: 78 PPEEVDYLMRLPQEFLDRELQELDEHGVRVRLIGETDGLPPHTLRAVEAAMGRTRNNTGL 137
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY +R E+ A+++I + ++ G + DVD + I+ L T D+PDPDL+IRT G
Sbjct: 138 ILNFALNYGARAELVNAVRSIARRVQDGELGPEDVDEATISAALQTRDLPDPDLLIRTSG 197
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+FLLWQ+AYSE F WPDF+RE F A+ Y R RRFGG+
Sbjct: 198 ELRISNFLLWQIAYSELWFTEVLWPDFTREHLFEAVRAYQSRKRRFGGV 246
>gi|312135565|ref|YP_004002903.1| undecaprenyl diphosphate synthase [Caldicellulosiruptor owensensis
OL]
gi|311775616|gb|ADQ05103.1| undecaprenyl diphosphate synthase [Caldicellulosiruptor owensensis
OL]
Length = 248
Score = 234 bits (598), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 115/231 (49%), Positives = 149/231 (64%), Gaps = 1/231 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA RGLPR AGHR G + EIV A E+G+K LT++AFS NW+R
Sbjct: 18 PQHIAIIMDGNGRWAKKRGLPRSAGHRFGAQKLKEIVLFADEIGLKYLTVYAFSTENWKR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSL-KKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
P E+ L+ L++ F +L KK I+++VIG+ LD DI + AE +T+ G
Sbjct: 78 PKDEVENLMNLLREFFDTEIENLIKKTQIRIKVIGDISKLDKDIQERIISAEGRTKDKRG 137
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L + IA NY R EI A+KN+ DI++G + DVD L KYL T D+PDPDL+IR
Sbjct: 138 LCVVIALNYGGRQEIINAVKNLALDIKNGKIDIEDVDEELFKKYLYTYDIPDPDLLIRPS 197
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
GE R+S+FLLWQ++Y+EF F WPDF +E A+ Y RDRRFGG+
Sbjct: 198 GEMRVSNFLLWQISYTEFWFSNVLWPDFKKEHLLKAIEDYQKRDRRFGGVK 248
>gi|126737624|ref|ZP_01753354.1| undecaprenyl diphosphate synthase [Roseobacter sp. SK209-2-6]
gi|126721017|gb|EBA17721.1| undecaprenyl diphosphate synthase [Roseobacter sp. SK209-2-6]
Length = 249
Score = 234 bits (598), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 106/229 (46%), Positives = 148/229 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +RG PR GH G E+V E+G+K LTIFAFS NW+R
Sbjct: 19 PHHVAIIMDGNGRWAQSRGRPRLFGHHAGARRVREVVECCPELGVKYLTIFAFSTENWKR 78
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E++ L+ L + ++ K +L N++VR IG+R+ LD ++ ++ + E++T+ N G
Sbjct: 79 TQVEVAGLMSLFRRYISKEMKALAARNVRVRFIGDRVRLDAKLVKLMDQLEEETQENDGT 138
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L IA NY RDE++RA K + QD+ +G + VD + +YLDT +PDPDL+IRT G
Sbjct: 139 HLTIALNYGGRDEVARATKRLAQDVAAGKLDPEKVDQETLPRYLDTHVLPDPDLVIRTSG 198
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+FLLWQ AY+E+ FI WPDF+ E Y RDRRFGG+
Sbjct: 199 EARISNFLLWQSAYAEYEFIDTLWPDFTSEEMGRLCRSYGSRDRRFGGV 247
>gi|225388994|ref|ZP_03758718.1| hypothetical protein CLOSTASPAR_02739 [Clostridium asparagiforme
DSM 15981]
gi|225044934|gb|EEG55180.1| hypothetical protein CLOSTASPAR_02739 [Clostridium asparagiforme
DSM 15981]
Length = 240
Score = 234 bits (598), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 106/229 (46%), Positives = 150/229 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +I+DGNGRWA RGLPR GH++G + V AA +GI+ LT++ FS NW+R
Sbjct: 10 PQHVALILDGNGRWAKKRGLPRTMGHKEGCVTVEKTVEIAARMGIRYLTVYGFSTENWKR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L++L + ++ + NN++V++IG+R D DI+ + E +T+ NTGL
Sbjct: 70 SADEVGALMQLFRFYMVRLLKIASANNVRVKMIGDRARFDRDIIEGINRLESETKDNTGL 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
IA NY RDEI RA K + QD +G V + +D + A YLDT+D+PDPDL+IRT G
Sbjct: 130 TFVIAVNYGGRDEIRRAAKRLAQDCTAGKVDADQIDEATFASYLDTADMPDPDLLIRTSG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS++LLWQ+AY+E V WPDF++E A+ QYN R+RRFGG+
Sbjct: 190 ELRLSNYLLWQLAYTEIVVTDCLWPDFNKEELEKAIVQYNRRERRFGGV 238
>gi|254476800|ref|ZP_05090186.1| undecaprenyl pyrophosphate synthetase 1 [Ruegeria sp. R11]
gi|214031043|gb|EEB71878.1| undecaprenyl pyrophosphate synthetase 1 [Ruegeria sp. R11]
Length = 244
Score = 234 bits (598), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 109/242 (45%), Positives = 152/242 (62%), Gaps = 3/242 (1%)
Query: 1 MVASMMSSSP---PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKN 57
M ++ +P P H+ IIMDGNGRWA ARG PR GH G + E+V +G+K
Sbjct: 1 MAPDPVAQTPDRGPKHVAIIMDGNGRWAQARGRPRLFGHHAGAKRVREVVECCPALGVKY 60
Query: 58 LTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
LTIFAFS NW+R E++ L+ L + ++ K +L + N++VR IG+R+ LD ++ ++
Sbjct: 61 LTIFAFSTENWKRTQVEVAGLMSLFRRYISKEMKALSQRNVRVRFIGDRVRLDKKLVGLM 120
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+ E +T N G +L IA NY RDE++RA K + +D+ G + DVD + KYLDT
Sbjct: 121 DQLEQETSCNDGTHLTIALNYGGRDEVARATKRLARDVAEGRLNPDDVDEETLPKYLDTH 180
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+PDPDL+IRT GE R+S+FLLWQ AY+E+ FI WPDFS E + Y RDRRFG
Sbjct: 181 VLPDPDLVIRTSGEARISNFLLWQSAYAEYEFIDTLWPDFSAEELKRLCDAYGQRDRRFG 240
Query: 238 GL 239
+
Sbjct: 241 AV 242
>gi|229019018|ref|ZP_04175859.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus AH1273]
gi|229025263|ref|ZP_04181683.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus AH1272]
gi|228736016|gb|EEL86591.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus AH1272]
gi|228742258|gb|EEL92417.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus AH1273]
Length = 258
Score = 234 bits (597), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 154/229 (67%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R +PR AGH +G++V +I A+++G+K LT++AFS NW+R
Sbjct: 30 PEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLGVKVLTLYAFSTENWKR 89
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL + FL L + N++VRVIG + L +++A + T+ NTGL
Sbjct: 90 PKKEVDYLMKLPEEFLGTFLPELIEENVQVRVIGQKDRLPTHTRRAMEKAMEDTKENTGL 149
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY SRDEI A++++ +D E G + + +V +I+ YL TS +PDP+L+IRT G
Sbjct: 150 ILNFALNYGSRDEIVSAVQHMMKDSEEGKIRAEEVSEEMISSYLMTSSLPDPELLIRTSG 209
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+F+LWQ+AYSEF F YWPDF+ E +A+ + R RRFGG+
Sbjct: 210 ELRISNFMLWQIAYSEFWFTDVYWPDFTEEHLLNAITDFQHRGRRFGGV 258
>gi|110679818|ref|YP_682825.1| undecaprenyl diphosphate synthase [Roseobacter denitrificans OCh
114]
gi|109455934|gb|ABG32139.1| undecaprenyl diphosphate synthase [Roseobacter denitrificans OCh
114]
Length = 258
Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 110/229 (48%), Positives = 145/229 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG PR GH G EIV A VG+K LTIFAFS NW+R
Sbjct: 28 PRHVAIIMDGNGRWATQRGRPRLFGHHAGARRVREIVEACPSVGVKYLTIFAFSTENWKR 87
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
+E++ L+ L K ++ + L ++VR IG+R LD + ++ E E+ T NT +
Sbjct: 88 TQAEVAGLMSLFKRYITRETRELNTYGVRVRFIGDRTRLDATLARLMTELENATAGNTNM 147
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L IA NY RDE++RA K + QD+ +G + DVD + KYLDT +PDPDL+IRT G
Sbjct: 148 HLTIAINYGGRDEVARATKRLAQDVANGMLKPEDVDEETLPKYLDTYVLPDPDLVIRTSG 207
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+FLLWQ AYSE+ FI WPDF+R F Y R+RR+GG+
Sbjct: 208 EARISNFLLWQSAYSEYEFIDTLWPDFTRSEFEEVCTAYGGRERRYGGV 256
>gi|288958463|ref|YP_003448804.1| undecaprenyl pyrophosphate synthetase [Azospirillum sp. B510]
gi|288910771|dbj|BAI72260.1| undecaprenyl pyrophosphate synthetase [Azospirillum sp. B510]
Length = 246
Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 107/234 (45%), Positives = 156/234 (66%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S++ P H+ IIMDGNGRWA ARGLPR AGH+KG++ V AA E+GI LTIF+FS
Sbjct: 9 SNTAPAHVAIIMDGNGRWAKARGLPRTAGHKKGVDAVRRTVEAARELGIGTLTIFSFSSE 68
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+S+L+ L++ +L+ L + I++RVIG+R L DI ++ AE TR
Sbjct: 69 NWRRPEEEVSDLMGLLRFYLRSEVAELHRAGIRLRVIGDRARLSADINRLIDNAEALTRD 128
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N + L +A +Y +R EI A + + +++ +G + +D ++ L T+D+PDPDLII
Sbjct: 129 NRVMTLVVALSYGARLEIVHAARRLAEEVAAGRLSPGAIDEEALSARLYTADIPDPDLII 188
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RT GEKR+S+FLLWQ AY+E VF+ WPDF++ A+ +++ R+RRFG +
Sbjct: 189 RTSGEKRISNFLLWQAAYAELVFVDTLWPDFTKRDLEAAIEEFHRRERRFGATT 242
>gi|229006099|ref|ZP_04163787.1| Undecaprenyl pyrophosphate synthetase [Bacillus mycoides Rock1-4]
gi|228755175|gb|EEM04532.1| Undecaprenyl pyrophosphate synthetase [Bacillus mycoides Rock1-4]
Length = 258
Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 108/229 (47%), Positives = 153/229 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R +PR AGH +G++V +I A+++ +K LT++AFS NW+R
Sbjct: 30 PEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLDVKVLTLYAFSTENWKR 89
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL + FL L + N++VRVIG + L +++A + T+ NTGL
Sbjct: 90 PKKEVDYLMKLPEEFLGTFLPELIEENVQVRVIGQKDRLPTHTRRAMEKAMEDTKENTGL 149
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY SRDEI A++++ +D E G V S DV+ +++ YL TS +PDPDL+IRT G
Sbjct: 150 ILNFALNYGSRDEIVSAVQHMMKDSEEGKVRSEDVNEEMLSSYLMTSSLPDPDLLIRTSG 209
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+F+LWQ+AYSE F YWPDF+ E +A+ + R RRFGG+
Sbjct: 210 ELRISNFMLWQIAYSELWFTDVYWPDFTEEHLLNAITDFQHRGRRFGGV 258
>gi|163736297|ref|ZP_02143716.1| undecaprenyl diphosphate synthase [Phaeobacter gallaeciensis BS107]
gi|163741174|ref|ZP_02148566.1| undecaprenyl diphosphate synthase [Phaeobacter gallaeciensis 2.10]
gi|161385527|gb|EDQ09904.1| undecaprenyl diphosphate synthase [Phaeobacter gallaeciensis 2.10]
gi|161390167|gb|EDQ14517.1| undecaprenyl diphosphate synthase [Phaeobacter gallaeciensis BS107]
Length = 252
Score = 233 bits (595), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 105/229 (45%), Positives = 148/229 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA ARG PR GH G + E+V +G+K LTIFAFS NW+R
Sbjct: 22 PKHVAIIMDGNGRWAQARGRPRLFGHHAGAKRVREVVECCPALGVKYLTIFAFSTENWKR 81
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E++ L+ L + ++ K +L + N++VR IG+R+ LD ++ ++ + E +T N G
Sbjct: 82 TQVEVAGLMSLFRRYISKEMKALSQRNVRVRFIGDRVRLDKKLVTLMDQLEQETACNDGT 141
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L IA NY SRDE++RA K + +D+ +G + DVD + +YLDT +PDPDL+IRT G
Sbjct: 142 HLTIALNYGSRDEVARATKRLAEDVAAGRLDPADVDEETLPRYLDTHVLPDPDLVIRTSG 201
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+FLLWQ AY+E+ FI WPDF+ + Y RDRRFG +
Sbjct: 202 EARISNFLLWQSAYAEYEFIDTLWPDFTADEMDRLCRSYGQRDRRFGAV 250
>gi|228992551|ref|ZP_04152478.1| Undecaprenyl pyrophosphate synthetase [Bacillus pseudomycoides DSM
12442]
gi|228767185|gb|EEM15821.1| Undecaprenyl pyrophosphate synthetase [Bacillus pseudomycoides DSM
12442]
Length = 258
Score = 233 bits (595), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 108/229 (47%), Positives = 153/229 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R +PR AGH +G++V +I A+++ +K LT++AFS NW+R
Sbjct: 30 PEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLDVKVLTLYAFSTENWKR 89
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL + FL L + N++VRVIG + L +++A + T+ NTGL
Sbjct: 90 PKKEVDYLMKLPEEFLGAFLPELIEENVQVRVIGQKDRLPTHTRRAMEKAMEDTKENTGL 149
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY SRDEI A++++ +D E G V S DV+ +++ YL TS +PDPDL+IRT G
Sbjct: 150 ILNFALNYGSRDEIVSAVQHMMKDSEEGKVRSEDVNEEMLSSYLMTSSLPDPDLLIRTSG 209
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+F+LWQ+AYSE F YWPDF+ E +A+ + R RRFGG+
Sbjct: 210 ELRISNFMLWQIAYSELWFTDVYWPDFTEEHLLNAITDFQHRGRRFGGV 258
>gi|229086376|ref|ZP_04218552.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus Rock3-44]
gi|228696892|gb|EEL49701.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus Rock3-44]
Length = 258
Score = 233 bits (595), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 108/229 (47%), Positives = 153/229 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R +PR AGH +G++V +I A+++ +K LT++AFS NW+R
Sbjct: 30 PEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLDVKVLTLYAFSTENWKR 89
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL + FL L + N++VRVIG + L +++A + T+ NTGL
Sbjct: 90 PKKEVDYLMKLPEEFLGTFLPDLIEENVQVRVIGQKDRLPTHTRRAMEKAMEDTKENTGL 149
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY SRDEI A++++ +D E G V S D++ +I+ YL TS +PDPDL+IRT G
Sbjct: 150 ILNFALNYGSRDEIVSAVQHMMRDSEEGKVRSEDINEEMISSYLMTSSLPDPDLLIRTSG 209
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+F+LWQ+AYSE F YWPDF+ E +A+ + R RRFGG+
Sbjct: 210 ELRISNFMLWQIAYSELWFTDVYWPDFTEEHLLNAITDFQHRGRRFGGV 258
>gi|163795638|ref|ZP_02189604.1| Undecaprenyl pyrophosphate synthase [alpha proteobacterium BAL199]
gi|159179237|gb|EDP63770.1| Undecaprenyl pyrophosphate synthase [alpha proteobacterium BAL199]
Length = 248
Score = 233 bits (595), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 107/233 (45%), Positives = 157/233 (67%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA ARG+PR GHR+G + V AA E+G+ LT+F FS NW R
Sbjct: 14 PLHVAIIMDGNGRWARARGMPRSFGHREGAKAVKRTVQAACELGVGYLTLFGFSSENWSR 73
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EI +L++L++ +L++ L K+ I+ RVIG+R DDI+ +++ E T NT +
Sbjct: 74 PAQEIGDLMELLRFYLRREIAELHKDGIRFRVIGDRTLFSDDIVTLIENGERLTAGNTRM 133
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA +Y R E++ A++ I +D+ +G + +D +++A L T+D+PDPDL+IRT G
Sbjct: 134 VLTIALSYGGRRELTGAVRRIAEDVAAGRLDPTAIDETVVASRLYTADLPDPDLLIRTSG 193
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
EKR+S+FLLWQ+AY+EFVF+ WPDF + AL+++ RDRRFG + +G
Sbjct: 194 EKRISNFLLWQIAYAEFVFLDVLWPDFGLQHLEEALDEFARRDRRFGRATGQG 246
>gi|226313031|ref|YP_002772925.1| undecaprenyl pyrophosphate synthetase [Brevibacillus brevis NBRC
100599]
gi|226095979|dbj|BAH44421.1| undecaprenyl pyrophosphate synthetase [Brevibacillus brevis NBRC
100599]
Length = 236
Score = 233 bits (595), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 104/233 (44%), Positives = 155/233 (66%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S P+H+ IIMDGNGRWA R LPR AGHR G++ E+V AA E+G++ +T++AFS
Sbjct: 4 SGKIPEHVAIIMDGNGRWANKRSLPRVAGHRAGMKAVKEVVKAADEIGVRYMTMYAFSTE 63
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW+RP E+ L+KL + FL L + +++R++G++ L L L EAE++T+
Sbjct: 64 NWKRPRDEVDFLMKLPQEFLSTELDELIERGVRIRMLGSKNELPSHTLKALLEAEERTKD 123
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N+GL L A NY RDE+++A + + +++G + + LI+ YL TS++PDPDL+I
Sbjct: 124 NSGLQLNFALNYGGRDELAKAFSVMAEQVKAGELQPEQLTEELISSYLYTSEIPDPDLLI 183
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+F+LWQ+AY+E F WPDF+RE F+ A+ +Y R RR+G +
Sbjct: 184 RTSGEIRLSNFMLWQLAYTELWFTDVLWPDFTREHFYQAIVEYQGRARRYGAV 236
>gi|228998599|ref|ZP_04158186.1| Undecaprenyl pyrophosphate synthetase [Bacillus mycoides Rock3-17]
gi|228761067|gb|EEM10026.1| Undecaprenyl pyrophosphate synthetase [Bacillus mycoides Rock3-17]
Length = 257
Score = 233 bits (595), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 108/229 (47%), Positives = 153/229 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R +PR AGH +G++V +I A+++ +K LT++AFS NW+R
Sbjct: 29 PEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLDVKVLTLYAFSTENWKR 88
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL + FL L + N++VRVIG + L +++A + T+ NTGL
Sbjct: 89 PKKEVDYLMKLPEEFLGAFLPELIEENVQVRVIGQKDRLPTHTRRAMEKAMEDTKENTGL 148
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY SRDEI A++++ +D E G V S DV+ +++ YL TS +PDPDL+IRT G
Sbjct: 149 ILNFALNYGSRDEIVSAVQHMMKDSEEGKVRSEDVNEEMLSSYLMTSSLPDPDLLIRTSG 208
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+F+LWQ+AYSE F YWPDF+ E +A+ + R RRFGG+
Sbjct: 209 ELRISNFMLWQIAYSELWFTDVYWPDFTEEHLLNAITDFQHRGRRFGGV 257
>gi|83951885|ref|ZP_00960617.1| undecaprenyl diphosphate synthase [Roseovarius nubinhibens ISM]
gi|83836891|gb|EAP76188.1| undecaprenyl diphosphate synthase [Roseovarius nubinhibens ISM]
Length = 244
Score = 233 bits (594), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 106/232 (45%), Positives = 155/232 (66%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+S P H+ IIMDGNGRWA +RG PR GH G + EIV ++G+K LT+FAFS N
Sbjct: 11 ASAPRHVAIIMDGNGRWAQSRGRPRLFGHHAGAKRVREIVETCPDLGVKYLTVFAFSTEN 70
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W+R +E++ L+ L + ++ K +L+ + ++VR IG+R+ LD ++ ++ E E T N
Sbjct: 71 WKRTQTEVAGLMSLFRRYITKEARALRDDGVRVRFIGDRVRLDRKLVSMMDELEAMTEGN 130
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
++L IA NY SRDE+ RA+K + +D+ + + DVD +A+YLDT +PDPDL+IR
Sbjct: 131 DRVHLTIALNYGSRDEVGRAMKLMAEDVAANRLSPGDVDDGTLARYLDTRVLPDPDLVIR 190
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
T GE R+S+FLLWQ AY+E+ FI WPDF+ E+F ++ Y RDRRFG +
Sbjct: 191 TSGEARISNFLLWQSAYAEYEFIDTLWPDFTAEIFTGLVHGYAKRDRRFGAV 242
>gi|254501824|ref|ZP_05113975.1| undecaprenyl diphosphate synthase [Labrenzia alexandrii DFL-11]
gi|222437895|gb|EEE44574.1| undecaprenyl diphosphate synthase [Labrenzia alexandrii DFL-11]
Length = 255
Score = 233 bits (594), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 109/244 (44%), Positives = 160/244 (65%), Gaps = 3/244 (1%)
Query: 3 ASMMSSSP---PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
A +S++P P+H+ IMDGNGRWA++RGLPR GHR+G+E +I+ AA G+ +T
Sbjct: 11 AEPVSAAPSHVPNHVAFIMDGNGRWASSRGLPRTEGHRQGLEALRKIIRHAALRGVGIVT 70
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
I++FS NW RP E+ L+ L++ F+++ L + NI++R+IG R +LD IL +L +
Sbjct: 71 IYSFSTENWSRPEPEVRFLMGLLRRFVQRDLSELHRENIRIRIIGERDNLDAGILKLLLD 130
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV 179
AE+ TR NTG+ L +AFNY +R E++ A+K + + + G + + S I+ LDT +
Sbjct: 131 AEELTRNNTGMELVVAFNYGARQELTAAVKKLCEKVARGEIEPSAISESHISAELDTVGL 190
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDPDLI+RT GE RLS+FLLWQ AY+EF F WPDF AL + RDRR+GG+
Sbjct: 191 PDPDLIVRTSGELRLSNFLLWQAAYTEFYFSDLMWPDFDEAALDQALECFGNRDRRYGGV 250
Query: 240 SKKG 243
+ +
Sbjct: 251 TAQA 254
>gi|23013454|ref|ZP_00053347.1| COG0020: Undecaprenyl pyrophosphate synthase [Magnetospirillum
magnetotacticum MS-1]
Length = 243
Score = 233 bits (593), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 112/237 (47%), Positives = 158/237 (66%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M+++ PP H+ IIMDGNGRWA ARGLPR AGH++G E V AA E+G+ LT+
Sbjct: 4 MLSNADQPPPPAHVAIIMDGNGRWAKARGLPRTAGHKRGAEAVRRTVEAAREMGVSYLTL 63
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP EI++L+ L++ +L+ SL KN I+++VIG+R L DI+ +++++
Sbjct: 64 YAFSSENWKRPAGEITDLMGLLRLYLRNEVNSLHKNGIRLKVIGDRTRLGADIIRLIEDS 123
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E +T NT L L +A +Y R EI A + + QD+ G V + DVD I L T+ +P
Sbjct: 124 EAKTAGNTALTLLLALSYGGRQEIVAAARVLAQDVADGKVAAEDVDEDAINARLSTAGIP 183
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DPD+IIRT GE+R+S+FLLWQ AY+E VF+ WPDF R A+ ++ RDRRFG
Sbjct: 184 DPDMIIRTSGEQRISNFLLWQGAYAELVFMDTLWPDFGRSELESAIRDFHGRDRRFG 240
>gi|138894773|ref|YP_001125226.1| undecaprenyl pyrophosphate synthase [Geobacillus
thermodenitrificans NG80-2]
gi|196247604|ref|ZP_03146306.1| undecaprenyl diphosphate synthase [Geobacillus sp. G11MC16]
gi|134266286|gb|ABO66481.1| Undecaprenyl diphosphate synthase [Geobacillus thermodenitrificans
NG80-2]
gi|196212388|gb|EDY07145.1| undecaprenyl diphosphate synthase [Geobacillus sp. G11MC16]
Length = 257
Score = 233 bits (593), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 111/238 (46%), Positives = 155/238 (65%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
++S P+H+ IIMDGNGRWA R LPR AGH +G++V +I A E+G++ L+++AFS
Sbjct: 20 VLSHPIPNHVAIIMDGNGRWAKKRALPRVAGHYEGMQVVRKITRFANELGVRVLSLYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP SE+ L+KL + FL L N+KV+VIG L D ++ A +T
Sbjct: 80 TENWKRPKSEVDYLMKLPEQFLTTFLPELVAENVKVQVIGRTDELPDHTRQAVRRAIHET 139
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NTGL L A NY SR EI+ A++ I +D++ G++ D+ SLI+ YL T + DPDL
Sbjct: 140 SGNTGLILNFALNYGSRAEITAAVQQIAKDVQRGALAPGDITESLISSYLMTGGLDDPDL 199
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IRT GE RLS+F+LWQ+AY+EF F WPDF+ + F A+ Y RDRRFGG+S +
Sbjct: 200 LIRTSGEIRLSNFMLWQLAYTEFWFTDVLWPDFTEQHFLQAIAAYQQRDRRFGGVSAR 257
>gi|329767298|ref|ZP_08258824.1| di-trans,poly-cis-decaprenylcistransferase [Gemella haemolysans
M341]
gi|328836220|gb|EGF85890.1| di-trans,poly-cis-decaprenylcistransferase [Gemella haemolysans
M341]
Length = 254
Score = 233 bits (593), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 106/231 (45%), Positives = 152/231 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R +PR GH +G++ +I A+++G+K LT++AFS NW R
Sbjct: 23 PTHVAIIMDGNGRWAKKRNMPRIKGHYEGMQTVKKITKYASKLGVKYLTLYAFSTENWAR 82
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L + L +NN+KV VIG L ++ + +A +QT+ NTGL
Sbjct: 83 PKEEVSYLMDLPEKMFSSFMPELMENNVKVEVIGVVEKLPENTRKAVNDAIEQTKNNTGL 142
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY S+DE+ RAIK I +D++ + ++ ++ L TS+ PDPDL+IRT G
Sbjct: 143 KLIFALNYGSKDEMLRAIKQIAKDVQDNKYSAEEISEEHVSANLFTSNTPDPDLLIRTSG 202
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E+R+S+FLLWQ+AYSEF+F WPDF+ + F+ AL +Y RDRRFGGL++
Sbjct: 203 EQRISNFLLWQIAYSEFLFTKVAWPDFNEDEFYQALLEYQSRDRRFGGLNE 253
>gi|260437175|ref|ZP_05790991.1| di-trans,poly-cis-decaprenylcistransferase [Butyrivibrio crossotus
DSM 2876]
gi|292810488|gb|EFF69693.1| di-trans,poly-cis-decaprenylcistransferase [Butyrivibrio crossotus
DSM 2876]
Length = 244
Score = 232 bits (592), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 108/232 (46%), Positives = 155/232 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI II+DGNGRWA R LPR AGH +G V I A E+G+K LT++ FS NW+R
Sbjct: 13 PEHIAIILDGNGRWAKKRLLPRNAGHLQGSRVLERICDDAIEIGLKYLTVYVFSTENWKR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
SE+ L+K+++++LK + N+KV ++G + LD+DI+ + E E+ ++ NTGL
Sbjct: 73 SESEVQGLMKILRNYLKTCIKRAGEKNMKVVILGKQDMLDEDIIRSINELEESSKNNTGL 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
IA NY +RDE+ RA++ + +D+ + + + A YLDT+D PDPDLIIRT G
Sbjct: 133 VFQIALNYGARDEMVRAMRKMTKDMIDKGIAPEMITEDMFASYLDTADAPDPDLIIRTSG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
EKR+S+FLLWQ AYSEF F WPDF+++ A+ +YN RDRRFGG+ ++
Sbjct: 193 EKRISNFLLWQCAYSEFDFPEVLWPDFNKKRLIEAVERYNKRDRRFGGVKEE 244
>gi|85703598|ref|ZP_01034702.1| undecaprenyl diphosphate synthase [Roseovarius sp. 217]
gi|85672526|gb|EAQ27383.1| undecaprenyl diphosphate synthase [Roseovarius sp. 217]
Length = 247
Score = 232 bits (592), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 115/241 (47%), Positives = 151/241 (62%), Gaps = 4/241 (1%)
Query: 2 VASMMS-SSP---PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKN 57
VA M SSP P H+ IIMDGNGRWA RG PR GH G EIV + +G+K
Sbjct: 4 VAPMAGKSSPTEGPRHVAIIMDGNGRWAQKRGRPRLFGHHAGARRVREIVQSCPGLGVKY 63
Query: 58 LTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
LTIFAFS NW+R +E++ L+ L + ++ K + N++VR IG+R LD + ++
Sbjct: 64 LTIFAFSTENWKRTQTEVAGLMSLFRRYIMKEMQEFVRENVQVRFIGDRPRLDAKLRNLM 123
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
EAE T TG NL IA NY RDE+SRA K + D+ G + DV+ + +YLDT
Sbjct: 124 DEAEAMTAHCTGTNLTIALNYGGRDEVSRATKRLAIDVAEGRLRPEDVNEETLPRYLDTY 183
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+PDPDL+IRT GE R+S+FLLWQ AY+E+ FI WPDF+ ++F L+QY RDRRFG
Sbjct: 184 VLPDPDLVIRTSGEARISNFLLWQSAYAEYEFIDTLWPDFTPDVFARLLSQYGSRDRRFG 243
Query: 238 G 238
Sbjct: 244 A 244
>gi|325290372|ref|YP_004266553.1| Undecaprenyl pyrophosphate synthetase [Syntrophobotulus glycolicus
DSM 8271]
gi|324965773|gb|ADY56552.1| Undecaprenyl pyrophosphate synthetase [Syntrophobotulus glycolicus
DSM 8271]
Length = 271
Score = 232 bits (592), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 105/231 (45%), Positives = 151/231 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA +G+PR GHR G+E +V E+G+K LT++AFS NW+R
Sbjct: 38 PEHIAIIMDGNGRWAQKKGMPRGIGHRAGLEALKAVVRCCDEIGVKYLTVYAFSTENWKR 97
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SEI L+ L+K +LK+ L N++++RV G L D+ + +A +T+ N GL
Sbjct: 98 PQSEIGILMSLLKEYLKRELMELVANHVQIRVSGEIEQLPKDVYEDVLQACQKTKNNDGL 157
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY R EI +A++ I Q++ +G + +++ +I +L T+ +PDP+L+IRT G
Sbjct: 158 VFNLALNYGGRSEIVKAVREIAQEVRNGEISVQEINEKIIEDHLYTASIPDPELLIRTSG 217
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E RLS+FLLWQVAYSE V EYWPDF + +A+ Y R+RRFGG+ K
Sbjct: 218 EMRLSNFLLWQVAYSEIVVAEEYWPDFKEKSLLNAIEIYQNRERRFGGIMK 268
>gi|255262621|ref|ZP_05341963.1| undecaprenyl pyrophosphate synthetase 1 [Thalassiobium sp. R2A62]
gi|255104956|gb|EET47630.1| undecaprenyl pyrophosphate synthetase 1 [Thalassiobium sp. R2A62]
Length = 239
Score = 232 bits (592), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 106/236 (44%), Positives = 153/236 (64%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S + P H+ +IMDGNGRWA +RG PR GH G + EIV ++G+K LTIFAF
Sbjct: 2 SETETQGPRHVAVIMDGNGRWAQSRGRPRLFGHHAGAKRVREIVNVCPKLGVKYLTIFAF 61
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R +E+S L+KL + ++++ L + ++VR IG+R+ LD+ ++ ++ + E
Sbjct: 62 STENWKRTQTEVSGLMKLFRRYIQREAQDLLREGVRVRFIGDRVRLDERLVRMMDDLELL 121
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T N ++L IA NY RDE++RA K + D+E G + DV +AKYLDTS +PDPD
Sbjct: 122 TSDNDAVHLTIALNYGGRDEVARATKRLAYDVEQGRLSYKDVTDETLAKYLDTSVLPDPD 181
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
L++RT GE R+S+FLLWQ AY+E+ FI WPDF+ F + +Y RDRRFG +
Sbjct: 182 LVVRTSGEARISNFLLWQSAYAEYEFIDTLWPDFTEAEFAQVVGRYGARDRRFGAV 237
>gi|228986966|ref|ZP_04147092.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228772744|gb|EEM21184.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 258
Score = 232 bits (592), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 153/229 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R +PR AGH +G++V +I A+++ +K LT++AFS NW+R
Sbjct: 30 PEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLNVKVLTLYAFSTENWKR 89
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL + FL L + N++VRVIG + L +++A ++T+ NTGL
Sbjct: 90 PKKEVDYLMKLPEEFLGTFLPELIEENVQVRVIGQQDRLPTHTRRAMEKAMEETKENTGL 149
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY SRDEI A++++ +D E G V DV +++ YL TS +PDP+L+IRT G
Sbjct: 150 ILNFALNYGSRDEIVSAVQHMMKDSEKGKVRVEDVSEEMLSSYLMTSSLPDPELLIRTSG 209
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+F+LWQ+AYSEF F YWPDF+ E +A+ + R RRFGG+
Sbjct: 210 ELRISNFMLWQIAYSEFWFTDVYWPDFTEEHLLNAITDFQHRGRRFGGV 258
>gi|313901105|ref|ZP_07834593.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium sp. HGF2]
gi|312954063|gb|EFR35743.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium sp. HGF2]
Length = 234
Score = 232 bits (592), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 113/229 (49%), Positives = 150/229 (65%), Gaps = 1/229 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA RGLPR AGH++G E +I A +G+K LT +AFS NW+R
Sbjct: 7 PQHIAIIMDGNGRWAKKRGLPRTAGHKQGAENIRKIAIACNTMGVKALTCYAFSTENWKR 66
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L KL K F + LKKNNIKV +G D+ V+ A +QT+ NTGL
Sbjct: 67 PQDEVDYLCKLPKLFFNRYLAELKKNNIKVTFLGEIERFPDETRRVITTAVEQTQENTGL 126
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY SR EI+ A + QD++ G V S ++D Y+ T+D+P+ DL+IRT G
Sbjct: 127 ILCLAVNYGSRREITLAAQRYAQDVQQGKV-SPEIDEDAFGSYMMTADMPELDLMIRTSG 185
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+FLLWQ+AY+E +F P WPDFS+E A++++N R+RRFGGL
Sbjct: 186 ELRISNFLLWQLAYAELIFTPVAWPDFSQEELNRAIDEFNHRNRRFGGL 234
>gi|49478396|ref|YP_037884.1| undecaprenyl pyrophosphate synthase [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|52141665|ref|YP_085164.1| undecaprenyl diphosphate synthase [Bacillus cereus E33L]
gi|118479045|ref|YP_896196.1| undecaprenyl pyrophosphate synthase [Bacillus thuringiensis str. Al
Hakam]
gi|167635808|ref|ZP_02394117.1| undecaprenyl diphosphate synthase [Bacillus anthracis str. A0442]
gi|170687893|ref|ZP_02879107.1| undecaprenyl diphosphate synthase [Bacillus anthracis str. A0465]
gi|196036914|ref|ZP_03104298.1| undecaprenyl diphosphate synthase [Bacillus cereus W]
gi|196042152|ref|ZP_03109435.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus cereus
NVH0597-99]
gi|196044641|ref|ZP_03111876.1| undecaprenyl diphosphate synthase [Bacillus cereus 03BB108]
gi|206978509|ref|ZP_03239366.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus cereus
H3081.97]
gi|217961243|ref|YP_002339811.1| undecaprenyl diphosphate synthase [Bacillus cereus AH187]
gi|218904951|ref|YP_002452785.1| undecaprenyl diphosphate synthase [Bacillus cereus AH820]
gi|225865804|ref|YP_002751182.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus cereus
03BB102]
gi|228916460|ref|ZP_04080026.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228928871|ref|ZP_04091903.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228935137|ref|ZP_04097964.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|229123336|ref|ZP_04252540.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus 95/8201]
gi|229140464|ref|ZP_04269019.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus BDRD-ST26]
gi|229157399|ref|ZP_04285477.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus ATCC 4342]
gi|229186062|ref|ZP_04313232.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus BGSC 6E1]
gi|229197933|ref|ZP_04324649.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus m1293]
gi|254683470|ref|ZP_05147330.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus anthracis str.
CNEVA-9066]
gi|254721991|ref|ZP_05183780.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus anthracis str.
A1055]
gi|254739613|ref|ZP_05197307.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus anthracis str.
Kruger B]
gi|301055313|ref|YP_003793524.1| undecaprenyl diphosphate synthase [Bacillus anthracis CI]
gi|73920253|sp|Q6HEZ2|UPPS_BACHK RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|49329952|gb|AAT60598.1| undecaprenyl diphosphate synthase [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|51975134|gb|AAU16684.1| undecaprenyl diphosphate synthase [Bacillus cereus E33L]
gi|118418270|gb|ABK86689.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis str.
Al Hakam]
gi|167528765|gb|EDR91523.1| undecaprenyl diphosphate synthase [Bacillus anthracis str. A0442]
gi|170668209|gb|EDT18958.1| undecaprenyl diphosphate synthase [Bacillus anthracis str. A0465]
gi|195990469|gb|EDX54453.1| undecaprenyl diphosphate synthase [Bacillus cereus W]
gi|196024676|gb|EDX63348.1| undecaprenyl diphosphate synthase [Bacillus cereus 03BB108]
gi|196027004|gb|EDX65628.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus cereus
NVH0597-99]
gi|206743278|gb|EDZ54728.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus cereus
H3081.97]
gi|217065567|gb|ACJ79817.1| undecaprenyl diphosphate synthase [Bacillus cereus AH187]
gi|218535849|gb|ACK88247.1| undecaprenyl diphosphate synthase [Bacillus cereus AH820]
gi|225786641|gb|ACO26858.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus cereus
03BB102]
gi|228585651|gb|EEK43753.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus m1293]
gi|228597481|gb|EEK55131.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus BGSC 6E1]
gi|228626126|gb|EEK82875.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus ATCC 4342]
gi|228643025|gb|EEK99301.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus BDRD-ST26]
gi|228660112|gb|EEL15748.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus 95/8201]
gi|228824502|gb|EEM70307.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228830678|gb|EEM76283.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228843039|gb|EEM88121.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|300377482|gb|ADK06386.1| undecaprenyl diphosphate synthase [Bacillus cereus biovar anthracis
str. CI]
Length = 258
Score = 232 bits (592), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 153/229 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R +PR AGH +G++V +I A+++ +K LT++AFS NW+R
Sbjct: 30 PEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLNVKVLTLYAFSTENWKR 89
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL + FL L + N++VRVIG + L +++A ++T+ NTGL
Sbjct: 90 PKKEVDYLMKLPEEFLGTFLPELIEENVQVRVIGQQDRLPTHTRRAMEKAMEETKENTGL 149
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY SRDEI A++++ +D E G V DV +++ YL TS +PDP+L+IRT G
Sbjct: 150 ILNFALNYGSRDEIVSAVQHMMKDSEEGKVRVEDVSEEMLSSYLMTSSLPDPELLIRTSG 209
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+F+LWQ+AYSEF F YWPDF+ E +A+ + R RRFGG+
Sbjct: 210 ELRISNFMLWQIAYSEFWFTDVYWPDFTEEHLLNAITDFQHRGRRFGGV 258
>gi|228947542|ref|ZP_04109832.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228812062|gb|EEM58393.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
Length = 257
Score = 232 bits (591), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 153/229 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R +PR AGH +G++V +I A+++ +K LT++AFS NW+R
Sbjct: 29 PEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLNVKVLTLYAFSTENWKR 88
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL + FL L + N++VRVIG + L +++A ++T+ NTGL
Sbjct: 89 PKKEVDYLMKLPEEFLGTFLPELIEENVQVRVIGQQDRLPTHTRRAMEKAMEETKENTGL 148
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY SRDEI A++++ +D E G V DV +++ YL TS +PDP+L+IRT G
Sbjct: 149 ILNFALNYGSRDEIVSAVQHMMKDSEEGKVRVEDVSEEMLSSYLMTSSLPDPELLIRTSG 208
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+F+LWQ+AYSEF F YWPDF+ E +A+ + R RRFGG+
Sbjct: 209 ELRISNFMLWQIAYSEFWFTDVYWPDFTEEHLLNAITDFQHRGRRFGGV 257
>gi|303228527|ref|ZP_07315355.1| di-trans,poly-cis-decaprenylcistransferase [Veillonella atypica
ACS-134-V-Col7a]
gi|303232057|ref|ZP_07318760.1| di-trans,poly-cis-decaprenylcistransferase [Veillonella atypica
ACS-049-V-Sch6]
gi|302513163|gb|EFL55202.1| di-trans,poly-cis-decaprenylcistransferase [Veillonella atypica
ACS-049-V-Sch6]
gi|302516774|gb|EFL58688.1| di-trans,poly-cis-decaprenylcistransferase [Veillonella atypica
ACS-134-V-Col7a]
Length = 253
Score = 232 bits (591), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 102/232 (43%), Positives = 151/232 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG+PR GHR G +V EIV AA E+G+K LT++ FS NW+R
Sbjct: 22 PRHVAIIMDGNGRWAKRRGMPRSMGHRAGADVLKEIVIAADEIGVKALTVYGFSTENWKR 81
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ LIK +L+K + ++N+++R IG L +++ ++ ++E T+ NTGL
Sbjct: 82 PEQEVSLLMALIKEYLQKNVQYMHEHNVRIRFIGYIQGLSEELQTIISDSEALTKNNTGL 141
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY RDEI R ++ I Q + G + D+ ++ +L T + D DL+IR
Sbjct: 142 TLQLAINYGGRDEIVRTVQGIAQSVLEGQLAVQDITEQYVSSHLYTQEFSDVDLLIRPSK 201
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+ R+S+FLLWQ+AY+EF F +WPDF++E A+ Y R+RRFGGL ++
Sbjct: 202 DYRISNFLLWQLAYAEFWFTDLHWPDFTKETLLEAIAAYQKRERRFGGLQEE 253
>gi|212639531|ref|YP_002316051.1| undecaprenyl pyrophosphate synthase [Anoxybacillus flavithermus
WK1]
gi|212561011|gb|ACJ34066.1| Undecaprenyl pyrophosphate synthase [Anoxybacillus flavithermus
WK1]
Length = 254
Score = 232 bits (591), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 105/236 (44%), Positives = 158/236 (66%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+++ P H+ IIMDGNGRWA R LPR AGH +G++ +I A E+G+K LT++AF
Sbjct: 19 AILQGPIPAHVAIIMDGNGRWAKKRALPRMAGHYEGMQTVRKITRFANELGVKVLTLYAF 78
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP +E+ L++L + FL L + N++VRV+G++ L L + +A ++
Sbjct: 79 STENWKRPKTEVDYLMQLPEQFLNTFLPELIEENVQVRVMGHKDQLPLHTLRAVDKAIEE 138
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NTGL L A NY SR EI A++ + D+++G++ + DV+ L YL T+D+PDPD
Sbjct: 139 TKQNTGLILNFALNYGSRAEIVHAVQKLVDDVQNGAIQASDVNEQLFHSYLMTNDLPDPD 198
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
L+IRT GE RLS+F+LWQ+AY+EF F WPDF+ + F A++++ R RRFGG+
Sbjct: 199 LLIRTSGEIRLSNFMLWQLAYTEFWFTDVLWPDFTEQHFLQAVHEFQQRSRRFGGV 254
>gi|42782914|ref|NP_980161.1| undecaprenyl diphosphate synthase [Bacillus cereus ATCC 10987]
gi|73920252|sp|Q732P6|UPPS_BACC1 RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|42738841|gb|AAS42769.1| undecaprenyl diphosphate synthase [Bacillus cereus ATCC 10987]
Length = 258
Score = 232 bits (591), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 153/229 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R +PR AGH +G++V +I A+++ +K LT++AFS NW+R
Sbjct: 30 PEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLNVKVLTLYAFSTENWKR 89
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL + FL L + N++VRVIG + L +++A ++T+ NTGL
Sbjct: 90 PKKEVDYLMKLPEEFLGTFLPELIEENVQVRVIGQQDRLPTHTRRAMEKAMEETKENTGL 149
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY SRDEI A++++ +D E G V DV +++ YL TS +PDP+L+IRT G
Sbjct: 150 ILNFALNYGSRDEIVSAVQHMMKDREEGKVRVEDVSEEMLSSYLMTSSLPDPELLIRTSG 209
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+F+LWQ+AYSEF F YWPDF+ E +A+ + R RRFGG+
Sbjct: 210 ELRISNFMLWQIAYSEFWFTDVYWPDFTEEHLLNAITDFQHRGRRFGGV 258
>gi|324327720|gb|ADY22980.1| undecaprenyl pyrophosphate synthase [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 257
Score = 231 bits (590), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 153/229 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R +PR AGH +G++V +I A+++ +K LT++AFS NW+R
Sbjct: 29 PEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLNVKVLTLYAFSTENWKR 88
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL + FL L + N++VRVIG + L +++A ++T+ NTGL
Sbjct: 89 PKKEVDYLMKLPEEFLGTFLPELIEENVQVRVIGQQDRLPTHTRRAMEKAMEETKENTGL 148
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY SRDEI A++++ +D E G V DV +++ YL TS +PDP+L+IRT G
Sbjct: 149 ILNFALNYGSRDEIVSAVQHMMKDREEGKVRVEDVSEEMLSSYLMTSSLPDPELLIRTSG 208
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+F+LWQ+AYSEF F YWPDF+ E +A+ + R RRFGG+
Sbjct: 209 ELRISNFMLWQIAYSEFWFTDVYWPDFTEEHLLNAITDFQHRGRRFGGV 257
>gi|114569934|ref|YP_756614.1| undecaprenyl pyrophosphate synthetase [Maricaulis maris MCS10]
gi|114340396|gb|ABI65676.1| Undecaprenyl pyrophosphate synthetase [Maricaulis maris MCS10]
Length = 245
Score = 231 bits (590), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 103/229 (44%), Positives = 153/229 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H IIMDGNGRWA ARG PR GH++G+E +IV A E+G++ LT+F+FS NW R
Sbjct: 12 PRHTAIIMDGNGRWAKARGRPRSFGHKRGVETVRKIVEHAGELGVRYLTLFSFSTENWSR 71
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L +L+K +++ L + +++R+IG R +L D++ ++ AE +TR NT
Sbjct: 72 PADEVGALFELLKHYVEADLEGLARRGVRIRIIGRRDNLGADLIAIIDRAEARTRDNTDF 131
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L IAFNY RDEI RA + + ++ SG++ +D + + +LDT +PD DL+IRT G
Sbjct: 132 HLTIAFNYGGRDEILRACQAVAKEAASGALDVSTLDEARLGGFLDTEGLPDVDLMIRTSG 191
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+R+S+FLLWQ AY+E VF+ WPDF+ + A+N Y+ R RR+GG+
Sbjct: 192 EQRISNFLLWQAAYAELVFVEALWPDFTTDDLASAINTYHQRVRRYGGV 240
>gi|124006242|ref|ZP_01691077.1| undecaprenyl diphosphate synthase [Microscilla marina ATCC 23134]
gi|123988166|gb|EAY27824.1| undecaprenyl diphosphate synthase [Microscilla marina ATCC 23134]
Length = 248
Score = 231 bits (590), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 110/242 (45%), Positives = 161/242 (66%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M ++ S + P HI +IMDGNGRWA +G R GH+ ++ ++ A+AE+GIK LT+
Sbjct: 1 MKDNINSENLPQHIAVIMDGNGRWAKKKGARRVFGHKNAVKAVRDVTEASAELGIKYLTL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP +E+ L+KL+ S ++K +L KNN+K++ IGNR L L EA
Sbjct: 61 YAFSTENWSRPKAEVEALMKLLVSTIRKEVKTLVKNNVKLQSIGNRDDLPKGCQRELAEA 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ T+ +TGL L +A +YS R +I A+K+I D+++G V HD++++L +KYL T +P
Sbjct: 121 IELTKDHTGLTLTLALSYSGRWDIVNAVKDIAHDVKNGKVDPHDINTNLFSKYLSTDKMP 180
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DP+L+IRT GE R+S+FLLWQ+AYSE P WPDF RE + A+ Y R+RRFG S
Sbjct: 181 DPELMIRTSGEMRVSNFLLWQLAYSEIYISPILWPDFRREHLYEAIIDYQKRERRFGKTS 240
Query: 241 KK 242
++
Sbjct: 241 EQ 242
>gi|228940911|ref|ZP_04103470.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228973840|ref|ZP_04134416.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228980429|ref|ZP_04140739.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
Bt407]
gi|228779249|gb|EEM27506.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
Bt407]
gi|228785865|gb|EEM33868.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228818747|gb|EEM64813.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|326941591|gb|AEA17487.1| undecaprenyl diphosphate synthase [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 258
Score = 231 bits (590), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 152/229 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R +PR AGH +G++V +I A+++ +K LT++AFS NW+R
Sbjct: 30 PEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLNVKVLTLYAFSTENWKR 89
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL + FL L + N++VRVIG + L +++A + T+ NTGL
Sbjct: 90 PKKEVDYLMKLPEEFLGTFLPELIEENVQVRVIGQKNRLPTHTRRAMEKAMEDTKENTGL 149
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY SRDEI A++++ +D E G + S +V +I+ YL TS +PDP+L+IRT G
Sbjct: 150 ILNFALNYGSRDEIVSAVQHMMKDNEEGKIRSEEVSEEMISSYLMTSSLPDPELLIRTSG 209
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+F+LWQ+AYSEF F YWPDF E +A+ + R RRFGG+
Sbjct: 210 ELRISNFMLWQIAYSEFWFTDVYWPDFKEEHLLNAITDFQHRGRRFGGV 258
>gi|126729707|ref|ZP_01745520.1| undecaprenyl diphosphate synthase [Sagittula stellata E-37]
gi|126709826|gb|EBA08879.1| undecaprenyl diphosphate synthase [Sagittula stellata E-37]
Length = 241
Score = 231 bits (590), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 110/233 (47%), Positives = 144/233 (61%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S P H+ IIMDGNGRWA RG PR GH G EIV A G+ LTIFAFS
Sbjct: 7 QSHGPRHVAIIMDGNGRWATMRGRPRLFGHHAGARRVREIVEACPAAGVDYLTIFAFSTE 66
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRR E++ L+ L + ++ K + K N++VR IG+R LD + ++ EAE T
Sbjct: 67 NWRRTQVEVAGLMSLFRRYIMKEMQAFVKENVRVRFIGDRPRLDAKLRGLMDEAEAITGH 126
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
TG NL IA NY RDE++RA+K + QD+ +G + S DV + +YLDT +PDPDL+I
Sbjct: 127 CTGTNLTIALNYGGRDEVARAVKRLAQDVAAGKLRSDDVTEETLPRYLDTRVLPDPDLVI 186
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE R+S+FLLWQ AY+E+ F+ WPDF+ E F Y RDRR+G +
Sbjct: 187 RTSGEARISNFLLWQSAYAEYEFVDTLWPDFTPEEFARLCGAYGRRDRRYGAV 239
>gi|255524237|ref|ZP_05391196.1| undecaprenyl diphosphate synthase [Clostridium carboxidivorans P7]
gi|296185358|ref|ZP_06853768.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium
carboxidivorans P7]
gi|255512062|gb|EET88343.1| undecaprenyl diphosphate synthase [Clostridium carboxidivorans P7]
gi|296050192|gb|EFG89616.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium
carboxidivorans P7]
Length = 257
Score = 231 bits (588), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 111/229 (48%), Positives = 150/229 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR GH+ G+E EIV A+ +G+K LT++AFS NW+R
Sbjct: 28 PKHIAIIMDGNGRWARERNLPRTMGHKAGVEAIREIVKEASTLGVKYLTLYAFSTENWKR 87
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L+ +LKK F L NN+ ++ IG+ L L +A + T+ NTGL
Sbjct: 88 PSDEVGALMNLLVQYLKKEFKELNNNNVIIKHIGDISKLPSACQKELIDAYNNTKNNTGL 147
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY R+EI RA I++DI+S + +D ++I+KY+ TS++PDPDLIIR G
Sbjct: 148 TLNLALNYGGRNEIVRAFNLIYEDIKSHKLSEECIDETVISKYMYTSNMPDPDLIIRPSG 207
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+RLS+FLLWQ AYSEF + WPDF ++ A+ Y RDRRFGG+
Sbjct: 208 EQRLSNFLLWQCAYSEFWYSNIKWPDFGKKDLHKAIYDYQNRDRRFGGV 256
>gi|229162759|ref|ZP_04290716.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus R309803]
gi|228620641|gb|EEK77510.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus R309803]
Length = 258
Score = 231 bits (588), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 152/229 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R +PR AGH +G++V +I A+++ +K LT++AFS NW+R
Sbjct: 30 PEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLNVKVLTLYAFSTENWKR 89
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL + FL L + N++VRVIG + L +++A + T+ NTGL
Sbjct: 90 PKKEVDYLMKLPEEFLGTFLPELIEENVQVRVIGQQDRLPTHTRRAMEKAMEDTKENTGL 149
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY SRDEI A++++ +D E G V DV +++ YL TS +PDP+L+IRT G
Sbjct: 150 ILNFALNYGSRDEIVSAVQHMMKDSEEGKVRVEDVSEEMLSSYLMTSSLPDPELLIRTSG 209
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+F+LWQ+AYSEF F YWPDF+ E +A+ + R RRFGG+
Sbjct: 210 ELRISNFMLWQIAYSEFWFTDVYWPDFTEEHLLNAITDFQHRGRRFGGV 258
>gi|317495511|ref|ZP_07953879.1| di-trans,poly-cis-decaprenylcistransferase [Gemella moribillum
M424]
gi|316914325|gb|EFV35803.1| di-trans,poly-cis-decaprenylcistransferase [Gemella moribillum
M424]
Length = 254
Score = 231 bits (588), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 109/231 (47%), Positives = 149/231 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R +PR GH +G++ +I A+++GI+ LT++AFS NW R
Sbjct: 23 PTHVAIIMDGNGRWAKKRNMPRVKGHYEGMQTVKKITKYASKLGIQYLTLYAFSTENWAR 82
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L + L +NN+KV VIG L ++ +++A +QT+ NTGL
Sbjct: 83 PKEEVSYLMDLPEKMFTSFMPELMENNVKVEVIGVVEKLPENTRKAVEDAIEQTKNNTGL 142
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY S+DEI A+K I Q + ++D LI+ L T D PDPDL+IRT G
Sbjct: 143 KLIFALNYGSKDEIVTAVKRIAQGATNNEYKVEEIDEQLISDNLFTKDTPDPDLLIRTSG 202
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E+R+S+FLLWQ+AYSEF+F WPDF E F+ AL +Y RDRRFGGL++
Sbjct: 203 EQRISNFLLWQIAYSEFIFTKVAWPDFVEEEFYKALLEYQSRDRRFGGLNE 253
>gi|304404283|ref|ZP_07385945.1| undecaprenyl diphosphate synthase [Paenibacillus curdlanolyticus
YK9]
gi|304347261|gb|EFM13093.1| undecaprenyl diphosphate synthase [Paenibacillus curdlanolyticus
YK9]
Length = 254
Score = 231 bits (588), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 111/238 (46%), Positives = 156/238 (65%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
V ++ + P H+ IIMDGNGRWA +RGLPR AGH G++V +I AA +GI+ LT++
Sbjct: 17 VHTLTKDNMPKHVAIIMDGNGRWAKSRGLPRIAGHHTGMKVVKQITMAADRLGIQYLTLY 76
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP +E+ L++L + FL L NN++VR++G R +L + L+EA
Sbjct: 77 AFSTENWKRPKAEVDFLMRLPQEFLSIELEELIANNVQVRMMGYRDALPSHTIRALEEAI 136
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T NTGL L A NY SR E++ A+K I + + G + D++ S IA+ L T+ +PD
Sbjct: 137 ARTADNTGLILNFALNYGSRTEMTDAVKRIAEAVRDGELKPEDIEESTIAERLFTNGLPD 196
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDL+IRT GE RLS+F+LWQ+AYSE F YWP+FS F A+ +Y R RR+GGL
Sbjct: 197 PDLLIRTSGELRLSNFMLWQLAYSEMWFTDVYWPEFSESHFHEAIAEYQRRARRYGGL 254
>gi|30263827|ref|NP_846204.1| undecaprenyl diphosphate synthase [Bacillus anthracis str. Ames]
gi|47778228|ref|YP_020600.2| undecaprenyl diphosphate synthase [Bacillus anthracis str. 'Ames
Ancestor']
gi|49186673|ref|YP_029925.1| undecaprenyl pyrophosphate synthase [Bacillus anthracis str.
Sterne]
gi|65321150|ref|ZP_00394109.1| COG0020: Undecaprenyl pyrophosphate synthase [Bacillus anthracis
str. A2012]
gi|165872608|ref|ZP_02217239.1| undecaprenyl diphosphate synthase [Bacillus anthracis str. A0488]
gi|167639832|ref|ZP_02398101.1| undecaprenyl diphosphate synthase [Bacillus anthracis str. A0193]
gi|170706781|ref|ZP_02897239.1| undecaprenyl diphosphate synthase [Bacillus anthracis str. A0389]
gi|177651999|ref|ZP_02934545.1| undecaprenyl diphosphate synthase [Bacillus anthracis str. A0174]
gi|190568468|ref|ZP_03021375.1| undecaprenyl diphosphate synthase [Bacillus anthracis
Tsiankovskii-I]
gi|227813269|ref|YP_002813278.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus anthracis str.
CDC 684]
gi|229603927|ref|YP_002868061.1| undecaprenyl pyrophosphate synthetase 1 [Bacillus anthracis str.
A0248]
gi|254735861|ref|ZP_05193567.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus anthracis str.
Western North America USA6153]
gi|254756014|ref|ZP_05208045.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus anthracis str.
Vollum]
gi|254759325|ref|ZP_05211350.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus anthracis str.
Australia 94]
gi|42559791|sp|Q81WL2|UPPS_BACAN RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|30258471|gb|AAP27690.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus anthracis str.
Ames]
gi|47551933|gb|AAT33075.2| undecaprenyl diphosphate synthase [Bacillus anthracis str. 'Ames
Ancestor']
gi|49180600|gb|AAT55976.1| undecaprenyl diphosphate synthase [Bacillus anthracis str. Sterne]
gi|164711640|gb|EDR17186.1| undecaprenyl diphosphate synthase [Bacillus anthracis str. A0488]
gi|167512233|gb|EDR87610.1| undecaprenyl diphosphate synthase [Bacillus anthracis str. A0193]
gi|170128199|gb|EDS97068.1| undecaprenyl diphosphate synthase [Bacillus anthracis str. A0389]
gi|172082368|gb|EDT67433.1| undecaprenyl diphosphate synthase [Bacillus anthracis str. A0174]
gi|190560472|gb|EDV14450.1| undecaprenyl diphosphate synthase [Bacillus anthracis
Tsiankovskii-I]
gi|227002926|gb|ACP12669.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus anthracis str.
CDC 684]
gi|229268335|gb|ACQ49972.1| undecaprenyl pyrophosphate synthetase 1 [Bacillus anthracis str.
A0248]
Length = 258
Score = 231 bits (588), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 106/229 (46%), Positives = 153/229 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R +PR AGH +G++V +I A+++ +K LT++AFS NW+R
Sbjct: 30 PEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLNVKVLTLYAFSTENWKR 89
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L + FL L + N++VRVIG + L +++A ++T+ NTGL
Sbjct: 90 PKKEVDYLMQLPEEFLGTFLPELIEENVQVRVIGQQDRLPTHTRRAMEKAMEETKENTGL 149
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY SRDEI A++++ +D E G V DV +++ YL TS +PDP+L+IRT G
Sbjct: 150 ILNFALNYGSRDEIVSAVQHMMKDSEEGKVRVEDVSEEMLSSYLMTSSLPDPELLIRTSG 209
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+F+LWQ+AYSEF F YWPDF+ E +A+ + R RRFGG+
Sbjct: 210 ELRISNFMLWQIAYSEFWFTDVYWPDFTEEHLLNAITDFQHRGRRFGGV 258
>gi|114327600|ref|YP_744757.1| undecaprenyl pyrophosphate synthetase [Granulibacter bethesdensis
CGDNIH1]
gi|114315774|gb|ABI61834.1| undecaprenyl pyrophosphate synthetase [Granulibacter bethesdensis
CGDNIH1]
Length = 244
Score = 231 bits (588), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 107/227 (47%), Positives = 151/227 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWAAARGLPR AGHR G + +V AA E I LT++AFS NWRR
Sbjct: 14 PVHIGIIMDGNGRWAAARGLPRIAGHRAGAQAVRRVVQAAIEARIGWLTLYAFSSENWRR 73
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+++L L++ +++ L +N +++ +IG+R DI L +AE +T NT L
Sbjct: 74 PAGEVTDLTGLLRHYIRSEINELAENGVRLHIIGDRSRFSQDIQNDLAQAERRTAGNTVL 133
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L IA +Y +R EI A+++ + + +G + +D +L + +L T+ +PDPDLIIRT G
Sbjct: 134 HLVIALSYGARAEIINAVRSAAKALAAGHMVPEALDEALFSSFLSTAGMPDPDLIIRTSG 193
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+RLS+FLLWQ AY+E VF+ WPDF+ F AL ++ R+RRFG
Sbjct: 194 ERRLSNFLLWQAAYAELVFMDVLWPDFASVHFQQALAEFGRRERRFG 240
>gi|153812432|ref|ZP_01965100.1| hypothetical protein RUMOBE_02831 [Ruminococcus obeum ATCC 29174]
gi|149831594|gb|EDM86681.1| hypothetical protein RUMOBE_02831 [Ruminococcus obeum ATCC 29174]
Length = 238
Score = 231 bits (588), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 106/238 (44%), Positives = 158/238 (66%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M + P+HI II+DGNGRWA A+G+PR GH KG +I ++G+K LT++AFS
Sbjct: 1 MENMKVPNHIAIILDGNGRWAKAKGMPRGYGHIKGCANLEQICYDIKDLGVKYLTVYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+R E+ L+KL +S+LKK S +KN+++V++IG+ + D DI +++ E+ +
Sbjct: 61 TENWKRSREEVEGLMKLFRSYLKKCMKSAEKNHMRVKIIGDPTAFDQDIQDKIRKLEEFS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ L IA NY SRDEI+R ++ + QD G + ++ I+ YLDT+ VPDPDL
Sbjct: 121 KDYDELYFQIALNYGSRDEITRGMRKLAQDAADGRLNPQEITEDTISGYLDTAGVPDPDL 180
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IRT GE+RLS+FL+WQ+AY+EF F WPDF +E A+ +YN RDRR+GG+ ++
Sbjct: 181 LIRTSGEQRLSNFLMWQLAYTEFYFTDVAWPDFHKEDLIRAIEKYNGRDRRYGGVKEE 238
>gi|255283878|ref|ZP_05348433.1| di-trans,poly-cis-decaprenylcistransferase [Bryantella
formatexigens DSM 14469]
gi|255265599|gb|EET58804.1| di-trans,poly-cis-decaprenylcistransferase [Bryantella
formatexigens DSM 14469]
Length = 241
Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 108/229 (47%), Positives = 152/229 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ II+DGNGRWA ++G+PR GH +G + I A +GIK LT++ FS NW+R
Sbjct: 9 PRHVAIILDGNGRWAKSKGMPRNYGHSRGAKNLEVICEDAWNIGIKYLTVYLFSTENWKR 68
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L++L +S+ K + +KNN+KVRV+G+ +L +D+ L+ + ++ NTGL
Sbjct: 69 SPEEVDGLMRLFRSYTKTCIKTAQKNNMKVRVLGDPTALAEDLQESLRNLVESSKNNTGL 128
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
N IA NY SRDEI RAI+ I D G V D+ L A YLDT +VPDPDL+IRT G
Sbjct: 129 NFQIAINYGSRDEIVRAIRRISADCVDGKVKPEDITEDLFAGYLDTREVPDPDLLIRTSG 188
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS++L+WQ+AYSEF F WP F++E + A+ +YN R+RR+GG+
Sbjct: 189 ELRLSNYLMWQLAYSEFYFTDVPWPAFTKENLWQAIEKYNQRERRYGGV 237
>gi|218232974|ref|YP_002368624.1| undecaprenyl diphosphate synthase [Bacillus cereus B4264]
gi|228954099|ref|ZP_04116128.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|229047509|ref|ZP_04193099.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus AH676]
gi|229111294|ref|ZP_04240847.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus Rock1-15]
gi|218160931|gb|ACK60923.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus cereus B4264]
gi|228672070|gb|EEL27361.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus Rock1-15]
gi|228723756|gb|EEL75111.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus AH676]
gi|228805665|gb|EEM52255.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar kurstaki str. T03a001]
Length = 257
Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 106/229 (46%), Positives = 152/229 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R +PR AGH +G++V +I A+++ +K LT++AFS NW+R
Sbjct: 29 PEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLNVKVLTLYAFSTENWKR 88
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL + FL L + N++VRVIG + L +++A + T+ NTGL
Sbjct: 89 PKKEVDYLMKLPEEFLGTFLPELIEENVQVRVIGQKDRLPTHTRRAMEKAMEDTKENTGL 148
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY SRDEI A++++ +D E G + S +V +++ YL TS +PDP+L+IRT G
Sbjct: 149 ILNFALNYGSRDEIVSAVQHMMKDNEEGKIRSEEVSEEMLSSYLMTSSLPDPELLIRTSG 208
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+F+LWQ+AYSEF F YWPDF E +A+ + R RRFGG+
Sbjct: 209 ELRISNFMLWQIAYSEFWFTDVYWPDFKEEHLLNAITDFQHRGRRFGGV 257
>gi|218133703|ref|ZP_03462507.1| hypothetical protein BACPEC_01572 [Bacteroides pectinophilus ATCC
43243]
gi|217991078|gb|EEC57084.1| hypothetical protein BACPEC_01572 [Bacteroides pectinophilus ATCC
43243]
Length = 270
Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 103/232 (44%), Positives = 155/232 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ +I+DGNGRWA R +PR GH +G +V +++ ++G+K T++AFS NW R
Sbjct: 37 PEHVAVILDGNGRWAKKRLMPRTYGHYQGSKVVEDMLHVVDDMGVKYFTVYAFSTENWNR 96
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+K+++++L KNN++ RVIG L DIL + E++T+ NTGL
Sbjct: 97 SKDEVDTLMKILRTYLVDCVAKSMKNNVRCRVIGRPDGLSQDILDSIHNLEEKTKNNTGL 156
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
N IA NY RDEI RA+K+I ++ +G V D+ +IA++LDT ++PDPDL+IRT G
Sbjct: 157 NFTIAINYGGRDEIRRAVKSIADEVAAGKVKPDDITEQMIAQHLDTRELPDPDLLIRTSG 216
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+RLS+FL WQ+AY+EF F WPDF+ + A+ +YN R+RRFGG+ ++
Sbjct: 217 EERLSNFLPWQLAYTEFYFTSVLWPDFNEKEMIKAIEKYNKRERRFGGVKEE 268
>gi|154484747|ref|ZP_02027195.1| hypothetical protein EUBVEN_02464 [Eubacterium ventriosum ATCC
27560]
gi|149734595|gb|EDM50512.1| hypothetical protein EUBVEN_02464 [Eubacterium ventriosum ATCC
27560]
Length = 245
Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 108/227 (47%), Positives = 150/227 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ II+DGNGRWA R LPR AGH G + +I+ A ++GI+ +T++AFS NW R
Sbjct: 13 PKHVAIILDGNGRWAKKRFLPRNAGHAAGAKNVEKIIKDAHDMGIEYITMYAFSTENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL++++L KNN+ V+VIG R LD DIL + E E+ ++ NTG+
Sbjct: 73 PDDEVKALMKLLRNYLSDCIERANKNNMIVKVIGKRERLDQDILDRIDELEECSKNNTGI 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
IA NY SRDEI+RA K + + + G + D+ + YLDT+ +PDPDL+IRT G
Sbjct: 133 TFIIALNYGSRDEITRATKKMAKAVADGELNPDDITEDTVNSYLDTAGIPDPDLLIRTSG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E RLS++LLWQ+AY+EF F WPDF++E A+ +YN RDRRFG
Sbjct: 193 EIRLSNYLLWQLAYTEFYFTDVLWPDFNKEELKKAIVKYNERDRRFG 239
>gi|114764270|ref|ZP_01443498.1| undecaprenyl diphosphate synthase [Pelagibaca bermudensis HTCC2601]
gi|114543218|gb|EAU46235.1| undecaprenyl diphosphate synthase [Roseovarius sp. HTCC2601]
Length = 241
Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 153/239 (64%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + + P H+ IIMDGNGRWA RG PR GH G + EIV A ++G+ +TI
Sbjct: 1 MPKPIRDGAGPRHVAIIMDGNGRWAQRRGRPRLFGHHAGAKRVREIVEACPDLGVGYVTI 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW+R SE++ L+ L + ++ K SL N++VR IG+R+ LD ++ ++ E
Sbjct: 61 FAFSTENWKRTQSEVAGLMSLFRRYITKEARSLLGENVRVRFIGDRVRLDSKLVTLMDEL 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E T TG+NL IA NY RDE++RA K + +D+ +G + VD + KYLDT +P
Sbjct: 121 EQLTAGCTGVNLTIAINYGGRDEVARATKRLAEDVAAGRLDPASVDEETLPKYLDTCVLP 180
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRT GE R+S+FLLWQ AY+E+ F+ WPDFS + F ++ Y R+RR+GG+
Sbjct: 181 DPDLVIRTSGEARISNFLLWQSAYAEYEFVDTLWPDFSADEFGSLVSAYGSRERRYGGV 239
>gi|30021911|ref|NP_833542.1| undecaprenyl diphosphate synthase [Bacillus cereus ATCC 14579]
gi|206972650|ref|ZP_03233591.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus cereus AH1134]
gi|218898976|ref|YP_002447387.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus cereus G9842]
gi|228902326|ref|ZP_04066483.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis IBL
4222]
gi|228909647|ref|ZP_04073470.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis IBL
200]
gi|228922577|ref|ZP_04085877.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228960039|ref|ZP_04121703.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|229071321|ref|ZP_04204544.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus F65185]
gi|229081078|ref|ZP_04213588.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus Rock4-2]
gi|229129099|ref|ZP_04258072.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus BDRD-Cer4]
gi|229146394|ref|ZP_04274765.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus BDRD-ST24]
gi|229152022|ref|ZP_04280217.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus m1550]
gi|229180099|ref|ZP_04307443.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus 172560W]
gi|296504318|ref|YP_003666018.1| undecaprenyl diphosphate synthase [Bacillus thuringiensis BMB171]
gi|42559785|sp|Q819Y1|UPPS_BACCR RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|29897467|gb|AAP10743.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus ATCC 14579]
gi|206732407|gb|EDZ49588.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus cereus AH1134]
gi|218542759|gb|ACK95153.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus cereus G9842]
gi|228603308|gb|EEK60785.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus 172560W]
gi|228631371|gb|EEK88005.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus m1550]
gi|228637027|gb|EEK93486.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus BDRD-ST24]
gi|228654336|gb|EEL10201.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus BDRD-Cer4]
gi|228702122|gb|EEL54598.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus Rock4-2]
gi|228711775|gb|EEL63727.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus F65185]
gi|228799555|gb|EEM46508.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228837006|gb|EEM82347.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228849936|gb|EEM94767.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis IBL
200]
gi|228857295|gb|EEN01798.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis IBL
4222]
gi|296325370|gb|ADH08298.1| undecaprenyl diphosphate synthase [Bacillus thuringiensis BMB171]
Length = 258
Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 106/229 (46%), Positives = 152/229 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R +PR AGH +G++V +I A+++ +K LT++AFS NW+R
Sbjct: 30 PEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLNVKVLTLYAFSTENWKR 89
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL + FL L + N++VRVIG + L +++A + T+ NTGL
Sbjct: 90 PKKEVDYLMKLPEEFLGTFLPELIEENVQVRVIGQKDRLPTHTRRAMEKAMEDTKENTGL 149
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY SRDEI A++++ +D E G + S +V +++ YL TS +PDP+L+IRT G
Sbjct: 150 ILNFALNYGSRDEIVSAVQHMMKDNEEGKIRSEEVSEEMLSSYLMTSSLPDPELLIRTSG 209
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+F+LWQ+AYSEF F YWPDF E +A+ + R RRFGG+
Sbjct: 210 ELRISNFMLWQIAYSEFWFTDVYWPDFKEEHLLNAITDFQHRGRRFGGV 258
>gi|302386240|ref|YP_003822062.1| undecaprenyl diphosphate synthase [Clostridium saccharolyticum WM1]
gi|302196868|gb|ADL04439.1| undecaprenyl diphosphate synthase [Clostridium saccharolyticum WM1]
Length = 240
Score = 230 bits (586), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 105/229 (45%), Positives = 146/229 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ II+DGNGRWA RGLPR GH++G + V AA +GIK LT++ FS NW+R
Sbjct: 11 PEHVAIILDGNGRWAKKRGLPRSMGHKEGCVTVEKTVEDAARLGIKFLTVYGFSTENWKR 70
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L++L + ++ + K NN++V++IG+R D DI+ + + +QT+ NTGL
Sbjct: 71 TSDEVGALMQLFRYYMVRLLKVAKANNVRVKMIGDRNRFDQDIIEGISKLVEQTKNNTGL 130
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
IA NY RDEI RA + I D G + D+ + A YLDT +PDPDL+IRT G
Sbjct: 131 TFVIAVNYGGRDEIVRAARKIMMDTAEGKLLPEDMTEEIFASYLDTEGIPDPDLLIRTSG 190
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS++LLWQ+AY+E YWPDF+ E A+ YN R+RRFGG+
Sbjct: 191 ELRLSNYLLWQLAYTELYVTDCYWPDFNMEEMKKAIAAYNSRERRFGGV 239
>gi|229829208|ref|ZP_04455277.1| hypothetical protein GCWU000342_01295 [Shuttleworthia satelles DSM
14600]
gi|229792371|gb|EEP28485.1| hypothetical protein GCWU000342_01295 [Shuttleworthia satelles DSM
14600]
Length = 232
Score = 230 bits (586), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 101/229 (44%), Positives = 153/229 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ II+DGNGRWA ++G+PR GH G + I A E G++ LT++AFS NW R
Sbjct: 4 PEHVAIILDGNGRWAKSKGMPRTYGHTVGAKNVERISRIAYETGVRYLTLYAFSTENWSR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+KL+ ++L + +++N+++RVIG+ L+ + ++ E +T + TGL
Sbjct: 64 PDDEVSALMKLLTTYLNTCLKTARRDNMRLRVIGDISRLEPSLQELISRVERETSVYTGL 123
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL IA NY RDEI RA++ ++ D+ + ++ ++ YLDT+D+PDPDL+IRT G
Sbjct: 124 NLTIAVNYGGRDEIVRAMREMYIDLTEKGADASEITEGRLSSYLDTADLPDPDLLIRTSG 183
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+RLS++LLWQ+AY+EF F P WPDF RE F A+ Y R+RR+G +
Sbjct: 184 EQRLSNYLLWQLAYAEFYFTPVPWPDFRREEFLEAIAAYEHRERRYGKI 232
>gi|229013006|ref|ZP_04170171.1| Undecaprenyl pyrophosphate synthetase [Bacillus mycoides DSM 2048]
gi|228748260|gb|EEL98120.1| Undecaprenyl pyrophosphate synthetase [Bacillus mycoides DSM 2048]
Length = 258
Score = 230 bits (586), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 106/229 (46%), Positives = 152/229 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R +PR AGH +G++V +I A+++ +K LT++AFS NW+R
Sbjct: 30 PEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLDVKVLTLYAFSTENWKR 89
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL + FL L + N++VRVIG + L +++A + T+ NTGL
Sbjct: 90 PKKEVDYLMKLPEEFLGAFLPELLEENVQVRVIGQKDRLPTHTRRAMEKAMEDTKENTGL 149
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY SRDEI A++++ +D E G + S ++ I+ YL TS +PDP+L+IRT G
Sbjct: 150 ILNFALNYGSRDEIVSAVQHMMKDSEEGKIRSEEISEEKISSYLMTSSLPDPELLIRTSG 209
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+F+LWQ+AYSEF F YWPDF+ E +A+ + R RRFGG+
Sbjct: 210 ELRISNFMLWQIAYSEFWFTDVYWPDFTEEHLLNAITDFQHRGRRFGGV 258
>gi|254464147|ref|ZP_05077558.1| undecaprenyl pyrophosphate synthetase 1 [Rhodobacterales bacterium
Y4I]
gi|206685055|gb|EDZ45537.1| undecaprenyl pyrophosphate synthetase 1 [Rhodobacterales bacterium
Y4I]
Length = 252
Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 105/233 (45%), Positives = 148/233 (63%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ S P H+ IIMDGNGRWA ARG PR GH G E+V +G++ LTIFAFS
Sbjct: 18 ARSGPRHVAIIMDGNGRWAQARGRPRLFGHHAGARRVREVVECCPSLGVEYLTIFAFSTE 77
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW+R +E++ L+ L + ++ K +L + N++VR IG+R+ LD ++ ++ + E +T
Sbjct: 78 NWKRTQTEVAGLMSLFRRYISKEMNALAEKNVRVRFIGDRVRLDAKLIDLMDKLERKTEG 137
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N+G L IA NY RDE++RA K + +D+ G + DVD + +YLDT +PDPDL+I
Sbjct: 138 NSGTQLTIALNYGGRDEVARATKRLARDVAEGRLDPEDVDEETLPRYLDTHVLPDPDLVI 197
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE R+S+FLLWQ AY+E+ FI WPDF+ E Y RDRRFG +
Sbjct: 198 RTSGEARISNFLLWQSAYAEYEFIDTLWPDFTAEELARLCGSYGRRDRRFGAV 250
>gi|163941561|ref|YP_001646445.1| undecaprenyl diphosphate synthase [Bacillus weihenstephanensis
KBAB4]
gi|229061426|ref|ZP_04198771.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus AH603]
gi|229134630|ref|ZP_04263440.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus BDRD-ST196]
gi|229168562|ref|ZP_04296285.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus AH621]
gi|163863758|gb|ABY44817.1| undecaprenyl diphosphate synthase [Bacillus weihenstephanensis
KBAB4]
gi|228614968|gb|EEK72070.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus AH621]
gi|228648891|gb|EEL04916.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus BDRD-ST196]
gi|228717849|gb|EEL69497.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus AH603]
Length = 258
Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 106/229 (46%), Positives = 152/229 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R +PR AGH +G++V +I A+++ +K LT++AFS NW+R
Sbjct: 30 PEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLDVKVLTLYAFSTENWKR 89
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL + FL L + N++VRVIG + L +++A + T+ NTGL
Sbjct: 90 PKKEVDYLMKLPEEFLGAFLPELIEENVQVRVIGQKDRLPTHTRRAMEKAMEDTKENTGL 149
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY SRDEI A++++ +D E G + S ++ I+ YL TS +PDP+L+IRT G
Sbjct: 150 ILNFALNYGSRDEIVSAVQHMMKDSEEGKIRSEEISEEKISSYLMTSSLPDPELLIRTSG 209
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+F+LWQ+AYSEF F YWPDF+ E +A+ + R RRFGG+
Sbjct: 210 ELRISNFMLWQIAYSEFWFTDVYWPDFTEEHLLNAITDFQHRGRRFGGV 258
>gi|289423560|ref|ZP_06425361.1| undecaprenyl pyrophosphate synthetase 1 [Peptostreptococcus
anaerobius 653-L]
gi|289156062|gb|EFD04726.1| undecaprenyl pyrophosphate synthetase 1 [Peptostreptococcus
anaerobius 653-L]
Length = 243
Score = 229 bits (585), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 104/229 (45%), Positives = 150/229 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA +R +PR GH+ G+E ++V + +G+K LT++AFS NW+R
Sbjct: 14 PKHIAIIMDGNGRWAKSRMMPRTYGHKMGVETIRKVVKECSRLGVKYLTLYAFSTENWKR 73
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L+ S+L+K L KNN+K+ IG+ L + L ++ D+T+ NTGL
Sbjct: 74 PADEVNALMSLLVSYLRKELAELHKNNVKILTIGDISKLPQACIDELNKSIDETKDNTGL 133
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY SR +I A+ I + +E G + D+D +I+ + T ++ DPDL+IRT G
Sbjct: 134 VLSLALNYGSRADIKSAVTRIAKMVEEGKISIDDIDDEMISSSMSTRNIVDPDLVIRTSG 193
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+RLS+FLLW+VAYSEF F ++WPDF E A+ Y RDRRFG +
Sbjct: 194 EQRLSNFLLWEVAYSEFYFTDKHWPDFDEEALQEAIYNYQARDRRFGNV 242
>gi|150016076|ref|YP_001308330.1| undecaprenyl diphosphate synthase [Clostridium beijerinckii NCIMB
8052]
gi|149902541|gb|ABR33374.1| undecaprenyl diphosphate synthase [Clostridium beijerinckii NCIMB
8052]
Length = 252
Score = 229 bits (585), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 110/227 (48%), Positives = 147/227 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA + LPR GH+ G+E I+ A +GIKNLT++AFS NW R
Sbjct: 23 PNHIAIIMDGNGRWAKEQNLPRSMGHKAGVETIRRILKEATRLGIKNLTLYAFSTENWAR 82
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL+ ++LKK +N +++ V+G+ L + L+EA + TR NT +
Sbjct: 83 PKDEVGTLMKLLVTYLKKELKECHENGVRMNVLGDTSKLPKECQNALEEALETTRNNTKI 142
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL A NY R+EI RAIK I DI++G + D++ +L+ KYL T +PDPDLIIR G
Sbjct: 143 NLNFALNYGGRNEIVRAIKLINSDIKNGKLNEEDINEALVEKYLYTKGIPDPDLIIRPSG 202
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+RLS+FLLWQ AYSEF + WPDF + A+ Y RDRRFG
Sbjct: 203 EQRLSNFLLWQCAYSEFWYSDINWPDFKEKDLRKAIADYQNRDRRFG 249
>gi|295094738|emb|CBK83829.1| undecaprenyl diphosphate synthase [Coprococcus sp. ART55/1]
Length = 248
Score = 229 bits (585), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/227 (47%), Positives = 146/227 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ +IMDGNGRWA R LPR GH +G + I ++GIK LT++AFS NW+R
Sbjct: 19 PEHVAVIMDGNGRWAKKRFLPRNYGHAEGAKALEAICENCDKLGIKYLTVYAFSTENWKR 78
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
V E++ ++ L + +L +N+KV +IG R L +DI+ + + E +T NTGL
Sbjct: 79 SVEEVTGIMNLFRKYLVDSIERSNNSNMKVNLIGKREGLPEDIVQKMDDLERETAGNTGL 138
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
IA NY RDEI RA+K I +D ++G + + D+D SL A+YLDT VPDPDL+IRT G
Sbjct: 139 QFHIAINYGGRDEIVRAVKKIMKDADAGKISADDIDESLFAEYLDTKGVPDPDLLIRTSG 198
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+R S+FL WQ+AYSEF F WPDF + A+ YN R+RRFG
Sbjct: 199 EERTSNFLPWQLAYSEFYFTDTLWPDFDMDSLIEAVRYYNKRERRFG 245
>gi|260428159|ref|ZP_05782138.1| undecaprenyl pyrophosphate synthetase 1 [Citreicella sp. SE45]
gi|260422651|gb|EEX15902.1| undecaprenyl pyrophosphate synthetase 1 [Citreicella sp. SE45]
Length = 245
Score = 229 bits (585), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 153/239 (64%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + + P H+ IIMDGNGRWA RG PR GH G + EIV A ++G++ +TI
Sbjct: 5 MPKPIREGNGPRHVAIIMDGNGRWAQRRGRPRLFGHHAGAKRVREIVEACPDLGVRYVTI 64
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NWRR SE++ L+ L + ++ K +L + N++VR IG+R+ LD ++ ++ E
Sbjct: 65 FAFSTENWRRTQSEVAGLMSLFRRYITKEARALFEENVRVRFIGDRVRLDKKLVSLMDEL 124
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E T TG+NL IA NY RDE++RA + + QD+ +G + V+ + KYLDT +P
Sbjct: 125 ELMTSGCTGVNLTIAINYGGRDEVARATRRLAQDVAAGKLDPDAVNEETLPKYLDTCVLP 184
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRT GE R+S+FLLWQ AY+E+ FI WPDF E F + Y R+RR+GG+
Sbjct: 185 DPDLVIRTSGEARISNFLLWQSAYAEYEFIDTLWPDFCAEEFGRLVTAYGNRERRYGGV 243
>gi|254439174|ref|ZP_05052668.1| undecaprenyl diphosphate synthase [Octadecabacter antarcticus 307]
gi|198254620|gb|EDY78934.1| undecaprenyl diphosphate synthase [Octadecabacter antarcticus 307]
Length = 239
Score = 229 bits (585), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 106/233 (45%), Positives = 151/233 (64%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S P+H+ IIMDGNGRWA R PR GH G EIV A + G+K LT+FAFS
Sbjct: 5 SKVGPNHVAIIMDGNGRWAQMRKRPRLLGHHAGARRVREIVEACPDQGVKYLTVFAFSTE 64
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW+R SE++ L+KL + ++++ +L N ++VR IG+R+ LDD ++ ++ E E T
Sbjct: 65 NWKRTQSEVAGLMKLFRRYIQREARNLLANGVRVRFIGDRVRLDDKLVRLMDELELLTSQ 124
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N ++L +A NY RDE++RA + + D+ +G + DVD + KYLDT +PDPDL+I
Sbjct: 125 NDRVHLTVALNYGGRDEVARATRRLAYDVAAGKLAPKDVDDETLPKYLDTYFLPDPDLVI 184
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE R+S+FLLWQ AY+E+ FI WPDF+ ++F L + RDRRFG +
Sbjct: 185 RTSGEARISNFLLWQSAYAEYEFIDTLWPDFTPDVFASVLTGFKARDRRFGAV 237
>gi|311030096|ref|ZP_07708186.1| undecaprenyl pyrophosphate synthase [Bacillus sp. m3-13]
Length = 257
Score = 229 bits (585), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 105/236 (44%), Positives = 155/236 (65%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+M+ P+HI IIMDGNGRWA R +PR AGH +G++ +I AA +G+K LT++AF
Sbjct: 22 EIMNHPIPEHIAIIMDGNGRWAKKRAMPRIAGHHEGMKTVRKITKAANSLGVKVLTMYAF 81
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP E+ L+KL + FL L + N++VR++GN+ L + L + A ++
Sbjct: 82 STENWKRPKLEVDFLMKLPEEFLGTFLPELMEENVQVRLMGNKSDLPEHTLRAVNNAMEK 141
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NTGL L A NY RDEI RA+KN+ DI+ ++ + + + ++YL ++ +PDPD
Sbjct: 142 TKDNTGLILNFALNYGGRDEILRAVKNVAADIKDNALTTDQLTEEMFSEYLFSNLLPDPD 201
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
L+IRT GE RLS+F+LWQ+AY+EF F WPDF + A+N + +R RRFGG+
Sbjct: 202 LLIRTSGEIRLSNFMLWQLAYAEFYFTDVLWPDFEENDLYEAINSFQMRGRRFGGI 257
>gi|225574999|ref|ZP_03783609.1| hypothetical protein RUMHYD_03078 [Blautia hydrogenotrophica DSM
10507]
gi|225037846|gb|EEG48092.1| hypothetical protein RUMHYD_03078 [Blautia hydrogenotrophica DSM
10507]
Length = 256
Score = 229 bits (584), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 105/232 (45%), Positives = 152/232 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ II+DGNGRWA A+G+PR GH KG I +G+K LT++AFS NW+R
Sbjct: 25 PNHVAIILDGNGRWAKAKGMPRSYGHVKGCANLETICDDMKALGVKYLTVYAFSTENWKR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+KL +++LKK +KN + VRVIG+ + D DI ++ E+ ++ T L
Sbjct: 85 SKEEVDGLMKLFRNYLKKCIKISEKNKMCVRVIGDIHAFDSDIQESIQRLEEYSKDFTEL 144
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ IA NY RDEI+R I+ + QD++ G + + L+ Y DT+ +PDPDL+IRT G
Sbjct: 145 HFQIALNYGGRDEITRGIRRLAQDVKDGKIAPEAISEELVEGYWDTAGLPDPDLLIRTSG 204
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+RLS+FL WQ+AY+EF F P WPDF+RE A+ +YN RDRR+GG+ ++
Sbjct: 205 EQRLSNFLPWQLAYTEFYFTPVAWPDFNREELVKAIEKYNERDRRYGGVKEE 256
>gi|254486469|ref|ZP_05099674.1| undecaprenyl pyrophosphate synthetase 1 [Roseobacter sp. GAI101]
gi|214043338|gb|EEB83976.1| undecaprenyl pyrophosphate synthetase 1 [Roseobacter sp. GAI101]
Length = 246
Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 106/239 (44%), Positives = 152/239 (63%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
S + P H+ IIMDGNGRWA RG PR GH G + EIV A G++ LTIFA
Sbjct: 8 TSELVPGAPRHVAIIMDGNGRWATQRGRPRLFGHHAGAKRVREIVEACPHFGVEYLTIFA 67
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW+R E++ L+ L + ++ K +L + ++VR IG+R+ LD ++ ++ E+
Sbjct: 68 FSTENWKRTQVEVAGLMSLFRRYISKETRALSEYGVRVRFIGDRVKLDKKLIKLMHVLEE 127
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NT ++L IA NY RDE++RA + + +D+ +G + DVD + +YLDT +PDP
Sbjct: 128 ATEHNTRVHLTIALNYGGRDEVARATQRLAEDVAAGLLDPKDVDEETLPRYLDTHVLPDP 187
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRT GE R+S+FLLWQ AY+E+ FI WPDFS+E F + +RDRRFG ++K
Sbjct: 188 DLVIRTSGEARISNFLLWQSAYAEYEFIDTLWPDFSKEEFGRLCAAFGVRDRRFGAVTK 246
>gi|229174489|ref|ZP_04302021.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus MM3]
gi|228609049|gb|EEK66339.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus MM3]
Length = 235
Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 105/229 (45%), Positives = 152/229 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R +PR AGH +G++V +I A+++ +K LT++AFS NW+R
Sbjct: 7 PEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLNVKVLTLYAFSTENWKR 66
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L + FL L + N++VRVIG + L +++A + T+ NTGL
Sbjct: 67 PKKEVDYLMRLPEEFLGTFLPELIEENVQVRVIGQQDRLPTHTRRAMEKAMEDTKENTGL 126
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY SRDEI A++++ +D E G + DV +++ YL TS +PDP+L+IRT G
Sbjct: 127 ILNFALNYGSRDEIVSAVQHMVKDSEEGKIRVEDVSEEMLSSYLMTSSLPDPELLIRTSG 186
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+F+LWQ+AYSEF F YWPDF+ E +A+ + R RRFGG+
Sbjct: 187 ELRISNFMLWQIAYSEFWFTDVYWPDFTEEHLLNAITDFQHRGRRFGGV 235
>gi|229136694|ref|ZP_04265353.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus BDRD-ST196]
gi|228646764|gb|EEL02940.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus BDRD-ST196]
Length = 258
Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 105/229 (45%), Positives = 152/229 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R +PR AGH +G+++ +I A+++ +K LT++AFS NW+R
Sbjct: 30 PEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQIVKKITKFASKLDVKVLTLYAFSTENWKR 89
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL + FL L + N++VRVIG + L ++ A + T+ NTGL
Sbjct: 90 PKKEVDYLMKLPEEFLGTFLPELIEENVQVRVIGQKDRLPTHTRRAMERAMEDTKDNTGL 149
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY SRDEI A++++ +D E G + S ++ +I+ YL TS +PDP+L+IRT G
Sbjct: 150 ILNFALNYGSRDEIVSAVQHMMKDSEEGKIRSEEISEEMISSYLMTSSLPDPELLIRTSG 209
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+F+LWQ+AYSEF F YWPDF+ E +A+ + R RRFGG+
Sbjct: 210 ELRISNFMLWQIAYSEFWFTDVYWPDFTEEHLLNAIADFQHRGRRFGGV 258
>gi|170757615|ref|YP_001781974.1| undecaprenyl diphosphate synthase [Clostridium botulinum B1 str.
Okra]
gi|169122827|gb|ACA46663.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum
B1 str. Okra]
Length = 252
Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 110/230 (47%), Positives = 148/230 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR GH+ G+E EIV +G+K LT++AFS NW+R
Sbjct: 23 PKHIAIIMDGNGRWAKERSLPRTMGHKAGVETIREIVKECNNLGVKYLTLYAFSTENWKR 82
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L+ +L+K L +NN+ V IGN L D + L++A ++T+ NTGL
Sbjct: 83 PKDEVSALMTLLVQYLRKEVKELNENNVIVNTIGNIEKLPDVCIKELEKAYEETKDNTGL 142
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY RDEI RA+K +++DI+ G + D++ ++ YL T + DPDLIIR G
Sbjct: 143 VLNLALNYGGRDEIIRAVKYMYEDIKVGKIKEEDINEENLSDYLYTKGMLDPDLIIRPSG 202
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
EKR+S+FLLWQ AYSEF + WPDF +E A+ Y RDRRFG +
Sbjct: 203 EKRISNFLLWQCAYSEFWYSDIKWPDFKKEHLHKAIYDYQNRDRRFGTVK 252
>gi|126736319|ref|ZP_01752061.1| undecaprenyl diphosphate synthase [Roseobacter sp. CCS2]
gi|126714140|gb|EBA11009.1| undecaprenyl diphosphate synthase [Roseobacter sp. CCS2]
Length = 241
Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 151/233 (64%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ + P H+ IIMDGNGRWA RG PR GH G +++ A E+G+K LTIFAFS
Sbjct: 7 AKTTPGHVAIIMDGNGRWAQQRGRPRLFGHHAGARRVRDVLTACPELGVKYLTIFAFSTE 66
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW+R SE++ L+ L + +L++ L ++ + VR IG+R+ LDD ++ ++ E E +T
Sbjct: 67 NWKRTQSEVAGLMALFRRYLEREAKELHESGVCVRFIGDRIRLDDKLVSLMDELELRTAD 126
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N ++L +A NY RDE++RA K + ++E G + DVD+ +A +LDT +PDPDL+I
Sbjct: 127 NDRVHLTVALNYGGRDEVTRAAKRLAYEVEQGRLTHEDVDAETLAGFLDTHVLPDPDLVI 186
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE R+S+FLLWQ AY+E+ F+ WPDF+ F L Y R+RRFG +
Sbjct: 187 RTSGEARISNFLLWQSAYAEYEFVDTLWPDFTAAEFAKVLKSYGTRERRFGAV 239
>gi|259416390|ref|ZP_05740310.1| undecaprenyl pyrophosphate synthetase 1 [Silicibacter sp.
TrichCH4B]
gi|259347829|gb|EEW59606.1| undecaprenyl pyrophosphate synthetase 1 [Silicibacter sp.
TrichCH4B]
Length = 256
Score = 229 bits (583), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 107/231 (46%), Positives = 144/231 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA ARG PR GH G E+V +GIK LTIFAFS NW+R
Sbjct: 26 PRHVAIIMDGNGRWAQARGRPRLFGHHAGARRVREVVECCPALGIKYLTIFAFSTENWKR 85
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E++ L+ L + ++ K +L N++VR IG+R+ LD ++ ++ E +T N G
Sbjct: 86 TQVEVAGLMSLFRRYISKEMKALAAKNVRVRFIGDRVRLDTKLVQLMDALEHETEGNDGT 145
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L IA NY RDE++RA + + QD+ G + DVD + +YLDT +PDPDL+IRT G
Sbjct: 146 HLTIALNYGGRDEVARATQRLAQDVADGKLDPADVDQETLPRYLDTHVLPDPDLVIRTSG 205
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E R+S+FLLWQ AYSE+ FI WPDFS + + RDRRFG + K
Sbjct: 206 EARISNFLLWQSAYSEYEFIDTLWPDFSSDELARLCQNFGNRDRRFGAVKK 256
>gi|29654679|ref|NP_820371.1| undecaprenyl pyrophosphate synthetase [Coxiella burnetii RSA 493]
gi|153207712|ref|ZP_01946359.1| undecaprenyl diphosphate synthase [Coxiella burnetii 'MSU Goat
Q177']
gi|154706962|ref|YP_001424019.1| undecaprenyl pyrophosphate synthetase [Coxiella burnetii Dugway
5J108-111]
gi|161830481|ref|YP_001597226.1| undecaprenyl diphosphate synthase [Coxiella burnetii RSA 331]
gi|165919002|ref|ZP_02219088.1| undecaprenyl diphosphate synthase [Coxiella burnetii RSA 334]
gi|212212247|ref|YP_002303183.1| undecaprenyl pyrophosphate synthetase [Coxiella burnetii CbuG_Q212]
gi|212218980|ref|YP_002305767.1| undecaprenyl pyrophosphate synthetase [Coxiella burnetii CbuK_Q154]
gi|42559798|sp|Q83BV5|UPPS_COXBU RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|29541947|gb|AAO90885.1| undecaprenyl pyrophosphate synthetase [Coxiella burnetii RSA 493]
gi|120576408|gb|EAX33032.1| undecaprenyl diphosphate synthase [Coxiella burnetii 'MSU Goat
Q177']
gi|154356248|gb|ABS77710.1| undecaprenyl pyrophosphate synthetase [Coxiella burnetii Dugway
5J108-111]
gi|161762348|gb|ABX77990.1| undecaprenyl diphosphate synthase [Coxiella burnetii RSA 331]
gi|165917327|gb|EDR35931.1| undecaprenyl diphosphate synthase [Coxiella burnetii RSA 334]
gi|212010657|gb|ACJ18038.1| undecaprenyl pyrophosphate synthetase [Coxiella burnetii CbuG_Q212]
gi|212013242|gb|ACJ20622.1| undecaprenyl pyrophosphate synthetase [Coxiella burnetii CbuK_Q154]
Length = 237
Score = 229 bits (583), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 111/227 (48%), Positives = 149/227 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I+MDGNGRWA RGLPR AGHR G +V IV AAE ++ LT+FAFSI N R
Sbjct: 3 PRHVAIVMDGNGRWANRRGLPRVAGHRAGAKVVRRIVEYAAEKPLEVLTLFAFSIENRAR 62
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE++ L+ L LKK L KNN+++RVIG+ D +L ++ ++D T+ NTGL
Sbjct: 63 PQSEVNFLMSLFLDSLKKNTEELHKNNVQLRVIGDHREFDKKMLAQIQTSQDLTKHNTGL 122
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NYS R +I +A++ + + I++ + S + + L YL SD+P+PDL+IRT G
Sbjct: 123 KLIIALNYSGRWDILQAVQRMAEKIKNQELTSELMSAELFQNYLCLSDLPEPDLLIRTSG 182
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+RLS+F+LWQ AY+E F P WPDF+ E F AL Y R RRFG
Sbjct: 183 EQRLSNFMLWQFAYTEIYFTPALWPDFNEETFDQALAFYRTRQRRFG 229
>gi|164687910|ref|ZP_02211938.1| hypothetical protein CLOBAR_01555 [Clostridium bartlettii DSM
16795]
gi|164602323|gb|EDQ95788.1| hypothetical protein CLOBAR_01555 [Clostridium bartlettii DSM
16795]
Length = 243
Score = 229 bits (583), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 107/230 (46%), Positives = 146/230 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH+ G+E I+ +GIK++T++ FS NW+R
Sbjct: 14 PKHIAIIMDGNGRWAKKRFLPRTAGHKAGVETVRTIITECKRLGIKHVTLYTFSTENWKR 73
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L++++LKK L +NN+++ IG+ L L LK A + T+ N G
Sbjct: 74 PALEVETLMMLLQTYLKKEVEELNRNNVRLTAIGDIEKLPKACLEELKRAMELTKDNDGP 133
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL +A NY R +I+ A+K I +DIE+ + S D+ I YL T +PDPDL+IRT G
Sbjct: 134 NLNLALNYGGRYDITNAVKQISRDIENHKLNSDDITEETIKNYLSTKSIPDPDLVIRTSG 193
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E+RLS+FLLW++AY+E F YWPDF + A+ Y RDRRFGGL
Sbjct: 194 EQRLSNFLLWELAYAELYFTDVYWPDFDEKELQKAIYTYQNRDRRFGGLK 243
>gi|229191992|ref|ZP_04318962.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus ATCC 10876]
gi|228591543|gb|EEK49392.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus ATCC 10876]
Length = 258
Score = 229 bits (583), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 105/229 (45%), Positives = 152/229 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R +PR AGH +G++V +I A+++ +K LT++AFS NW+R
Sbjct: 30 PEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLNVKVLTLYAFSTENWKR 89
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL + FL L + N++VRVIG + L +++A + T+ NTGL
Sbjct: 90 PKKEVDYLMKLPEEFLGTFLPELIEENVQVRVIGQKDRLPTHTRRAMEKAMEDTKENTGL 149
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY SRDEI A++++ +D E G + S +V +++ YL T+ +PDP+L+IRT G
Sbjct: 150 ILNFALNYGSRDEIVSAVQHMMKDNEEGKIRSEEVSEEMLSSYLMTNSLPDPELLIRTSG 209
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+F+LWQ+AYSEF F YWPDF E +A+ + R RRFGG+
Sbjct: 210 ELRISNFMLWQIAYSEFWFTDVYWPDFKEEHLLNAITDFQHRGRRFGGV 258
>gi|229031453|ref|ZP_04187453.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus AH1271]
gi|228729742|gb|EEL80722.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus AH1271]
Length = 257
Score = 229 bits (583), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 105/229 (45%), Positives = 152/229 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R +PR AGH +G++V +I A+++ +K LT++AFS NW+R
Sbjct: 29 PEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLNVKVLTLYAFSTENWKR 88
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L + FL L + N++VRVIG + L +++A + T+ NTGL
Sbjct: 89 PKKEVDYLMRLPEEFLGTFLPELIEENVQVRVIGQQDRLPTHTRRAMEKAMEDTKENTGL 148
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY SRDEI A++++ +D E G + DV +++ YL TS +PDP+L+IRT G
Sbjct: 149 ILNFALNYGSRDEIVSAVQHMVKDSEEGKIRVEDVSEEMLSSYLMTSSLPDPELLIRTSG 208
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+F+LWQ+AYSEF F YWPDF+ E +A+ + R RRFGG+
Sbjct: 209 ELRISNFMLWQIAYSEFWFTDVYWPDFTEEHLLNAITDFQHRGRRFGGV 257
>gi|99081253|ref|YP_613407.1| undecaprenyl pyrophosphate synthetase [Ruegeria sp. TM1040]
gi|99037533|gb|ABF64145.1| Undecaprenyl pyrophosphate synthetase [Ruegeria sp. TM1040]
Length = 256
Score = 229 bits (583), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 108/231 (46%), Positives = 143/231 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA ARG PR GH G E+V +GIK LTIFAFS NW+R
Sbjct: 26 PKHVAIIMDGNGRWAQARGRPRLFGHHAGARRVREVVECCPSLGIKYLTIFAFSTENWKR 85
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E++ L+ L + ++ K +L N++VR IG+R+ LD ++ ++ E +T N G
Sbjct: 86 TQVEVAGLMSLFRRYISKEMKALAAKNVRVRFIGDRVRLDTKLVQLMDALELETAGNDGT 145
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L IA NY RDE++RA + + QD+ G + DVD + +YLDT +PDPDL+IRT G
Sbjct: 146 HLTIALNYGGRDEVARATQRLAQDVADGRLDPRDVDEETLPRYLDTHVLPDPDLVIRTSG 205
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E R+S+FLLWQ AYSE+ FI WPDFS E + RDRRFG K
Sbjct: 206 EARISNFLLWQSAYSEYEFIDTLWPDFSSEELARLCRNFGNRDRRFGATKK 256
>gi|168184637|ref|ZP_02619301.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum
Bf]
gi|182672276|gb|EDT84237.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum
Bf]
Length = 252
Score = 229 bits (583), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 109/229 (47%), Positives = 148/229 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR GH+ G+E EIV +G+K LT++AFS NW+R
Sbjct: 23 PKHIAIIMDGNGRWAKERSLPRTMGHKAGVETIREIVKECNNLGVKYLTLYAFSTENWKR 82
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L+ +L+K L +NN+ V IGN L + + L++A ++T+ NTGL
Sbjct: 83 PKDEVSALMTLLVQYLRKEVKELNENNVIVNTIGNIEKLPEVCIKELEKAYEETKNNTGL 142
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY RDEI RA+K +++DI+ G + D++ ++ YL T + DPDLIIR G
Sbjct: 143 VLNLALNYGGRDEIIRAVKYMYEDIKVGKIKEEDINEENLSDYLYTKSMLDPDLIIRPSG 202
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
EKR+S+FLLWQ AYSEF + WPDF +E A+ Y RDRRFG +
Sbjct: 203 EKRISNFLLWQCAYSEFWYSDIKWPDFKKEHLHKAIYDYQNRDRRFGTV 251
>gi|288553031|ref|YP_003424966.1| undecaprenyl pyrophosphate synthase [Bacillus pseudofirmus OF4]
gi|288544191|gb|ADC48074.1| undecaprenyl pyrophosphate synthetase [Bacillus pseudofirmus OF4]
Length = 257
Score = 228 bits (582), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 112/229 (48%), Positives = 153/229 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +GLPR AGHR+G++V N+IV A E+G++ LT++AFS NW+R
Sbjct: 29 PRHVAIIMDGNGRWAKQKGLPRIAGHREGMKVVNKIVRRANELGVEVLTLYAFSTENWKR 88
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L+KL + FL L + N+KVR++G+ L + L + +A +T+ NTGL
Sbjct: 89 PKTEVDYLMKLPERFLGMELPKLMEENVKVRLMGSLDHLPEHTLRAVNKAVHETKDNTGL 148
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY SR E+ A+K I +E G + D+D +I L T+D+ DPDL+IRT G
Sbjct: 149 ILNFALNYGSRFEMVEAMKEIALKVEKGELKPSDIDDKVIESNLMTADLKDPDLLIRTSG 208
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+F+LWQVAYSEF F WPDF+ E F A++ Y R RRFGG+
Sbjct: 209 EIRLSNFMLWQVAYSEFWFTDVLWPDFNEEHFTEAISIYQKRARRFGGV 257
>gi|241890062|ref|ZP_04777360.1| di-trans,poly-cis-decaprenylcistransferase [Gemella haemolysans
ATCC 10379]
gi|241863684|gb|EER68068.1| di-trans,poly-cis-decaprenylcistransferase [Gemella haemolysans
ATCC 10379]
Length = 254
Score = 228 bits (582), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 105/231 (45%), Positives = 151/231 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R +PR GH +G++ +I A+++G++ LT++AFS NW R
Sbjct: 23 PTHVAIIMDGNGRWAKKRNMPRIKGHYEGMQTVKKITKYASKLGVEYLTLYAFSTENWAR 82
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L + L +NN+KV VIG L ++ + +A + T+ NTGL
Sbjct: 83 PKEEVSYLMDLPEKMFSSFMPELMENNVKVEVIGVVEKLPENTRKAVNDAIENTKNNTGL 142
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY S+DE+ RAIK I +D++ ++ +++ L TS+ PDPDL+IRT G
Sbjct: 143 KLIFALNYGSKDEMLRAIKQITKDVQDNKYSIDEISEEHVSQNLFTSNTPDPDLLIRTSG 202
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E+R+S+FLLWQ+AYSEF+F WPDF+ E F+ AL +Y RDRRFGGL++
Sbjct: 203 EQRISNFLLWQIAYSEFLFTKVAWPDFTEEEFYKALLEYQSRDRRFGGLNE 253
>gi|160880756|ref|YP_001559724.1| undecaprenyl diphosphate synthase [Clostridium phytofermentans
ISDg]
gi|160429422|gb|ABX42985.1| undecaprenyl diphosphate synthase [Clostridium phytofermentans
ISDg]
Length = 240
Score = 228 bits (582), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 106/229 (46%), Positives = 152/229 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R +PR GH++G ++ I A ++GIK +T++AFS NW R
Sbjct: 11 PNHIAIIMDGNGRWAKKRMMPRNYGHKQGSKIVENICREAYDIGIKYVTVYAFSTENWSR 70
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SEI L+KL++ FL + KKNN++V VIG+ L+ + + + E+ + NTGL
Sbjct: 71 PQSEIDTLMKLLRDFLSECLSKSKKNNMRVHVIGDITRLEQSLQDTIVKLEEVSASNTGL 130
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY +DEI RA + I QD++ G + D+++ + YLDT +P PDL+IRT G
Sbjct: 131 CFQVALNYGGQDEILRATRKIAQDVKDGKLSIEDLNTEVYEDYLDTKGIPAPDLLIRTSG 190
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+RLS+FLLWQ+AYSEF F WPDF+++ A+ YN R+RR+GG+
Sbjct: 191 EQRLSNFLLWQLAYSEFYFTDVLWPDFNKKELIKAIEFYNGRERRYGGV 239
>gi|329768877|ref|ZP_08260305.1| undecaprenyl pyrophosphate synthase [Gemella sanguinis M325]
gi|328837240|gb|EGF86877.1| undecaprenyl pyrophosphate synthase [Gemella sanguinis M325]
Length = 252
Score = 228 bits (581), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 105/231 (45%), Positives = 152/231 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R +PR GH +G++ +I A+++GIK LT++AFS NW R
Sbjct: 21 PTHVAIIMDGNGRWAKKRNMPRIKGHYEGMQTVKKITKFASKLGIKYLTLYAFSTENWAR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L + L ++N+KV VIG L ++ + +A +QT+ NTGL
Sbjct: 81 PKEEVSYLMDLPEKMFSSFMPELMESNVKVEVIGVIEKLPENTRKAVSDAIEQTKNNTGL 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY S+DEI A+K I D++S D+ +++ L T++ PDPDL+IRT G
Sbjct: 141 KLIFALNYGSKDEIISAVKTIASDVKSDKYSIEDITEETLSRNLFTANTPDPDLLIRTSG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E+R+S+FLLWQ+AYSEF+F WPDF+ E F+++L +Y RDRR+GGL++
Sbjct: 201 EQRISNFLLWQIAYSEFIFTKVAWPDFTEEEFYNSLLEYQNRDRRYGGLNE 251
>gi|282880534|ref|ZP_06289241.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella timonensis
CRIS 5C-B1]
gi|281305637|gb|EFA97690.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella timonensis
CRIS 5C-B1]
Length = 253
Score = 228 bits (581), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 104/232 (44%), Positives = 151/232 (65%), Gaps = 2/232 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWAA RGL R GH+ G+E I AA ++G+K LT++ FS NW R
Sbjct: 11 PAHIAIIMDGNGRWAAKRGLERSYGHQAGVETVRRITAACTKLGVKYLTLYTFSTENWNR 70
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EIS L+ L+ S L+ + KN+++ RVIG+ L D+ L E E+ T+ N +
Sbjct: 71 PSDEISALMGLVLSSLEDEIF--MKNDVRFRVIGDIARLPADVQKKLHETEEHTKDNATM 128
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ +A +YSSR EI++A+++I D+++G + +++KYL T+ +PDPDL+IRTGG
Sbjct: 129 TMVVALSYSSRWEITKAVQDIVTDVKAGKTSEQAICEDMVSKYLQTAFMPDPDLLIRTGG 188
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S++LLWQ+AYSE F +WPDF+ E + A+ Y R RRFG ++
Sbjct: 189 EVRVSNYLLWQIAYSELYFCDTFWPDFAEEDLYRAIANYQSRQRRFGKTEQQ 240
>gi|237795866|ref|YP_002863418.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum
Ba4 str. 657]
gi|229261238|gb|ACQ52271.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum
Ba4 str. 657]
Length = 252
Score = 228 bits (581), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 109/229 (47%), Positives = 148/229 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR GH+ G+E EIV +G+K LT++AFS NW+R
Sbjct: 23 PKHIAIIMDGNGRWAKERSLPRTMGHKAGVETIREIVKECNNLGVKYLTLYAFSTENWKR 82
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L+ +L+K L +NN+ V IGN L + + L++A ++T+ NTGL
Sbjct: 83 PKDEVSALMTLLVQYLRKEVKELNENNVIVNTIGNIEKLPEVCIKELEKAYEETKNNTGL 142
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY RDEI RA+K +++DI+ G + D++ ++ YL T + DPDLIIR G
Sbjct: 143 VLNLALNYGGRDEIIRAVKYMYEDIKVGKIKEEDINEENLSDYLYTKGMLDPDLIIRPSG 202
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
EKR+S+FLLWQ AYSEF + WPDF +E A+ Y RDRRFG +
Sbjct: 203 EKRISNFLLWQCAYSEFWYSDIKWPDFKKEHLHKAIYDYQNRDRRFGTV 251
>gi|298373781|ref|ZP_06983770.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroidetes oral
taxon 274 str. F0058]
gi|298274833|gb|EFI16385.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroidetes oral
taxon 274 str. F0058]
Length = 250
Score = 228 bits (581), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 108/233 (46%), Positives = 158/233 (67%), Gaps = 1/233 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI I+MDGNGRWA +G R GH GI +I AAAEVGIK LT++ FS NW R
Sbjct: 12 PEHIAIVMDGNGRWAKQKGFDRIFGHTNGINTVRQITEAAAEVGIKYLTLYTFSTENWNR 71
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EI ++KL+ ++K + +KNN+++ IG+ L L +D+ L+ +T NTGL
Sbjct: 72 PQEEIHGIMKLLVESIEKESETFRKNNVRLLAIGDLLRLPEDVNKKLQTCIAETSSNTGL 131
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD-VDSSLIAKYLDTSDVPDPDLIIRTG 189
+L +A +YSSR EI+ AIKNI +D SG + +D ++I+ YL T ++PDPD++IRTG
Sbjct: 132 SLVLALSYSSRWEITNAIKNIAKDCLSGKIDDIGLIDETVISDYLTTRNIPDPDIVIRTG 191
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
G+ R+S+FLLWQ AY+EF F YWP+F+++ FF ++++ R+RRFG S++
Sbjct: 192 GDIRISNFLLWQAAYAEFFFTKTYWPEFTKDEFFRIISEFQNRERRFGKTSEQ 244
>gi|302389811|ref|YP_003825632.1| Undecaprenyl pyrophosphate synthetase [Thermosediminibacter oceani
DSM 16646]
gi|302200439|gb|ADL08009.1| Undecaprenyl pyrophosphate synthetase [Thermosediminibacter oceani
DSM 16646]
Length = 248
Score = 228 bits (581), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 112/231 (48%), Positives = 150/231 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA RGLPR AGH G E IV +E+ IK LT+FAFS NW+R
Sbjct: 18 PNHIAIIMDGNGRWAQKRGLPRIAGHWAGAENLRNIVEFCSELNIKVLTVFAFSTENWKR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P+ E+ ++ L+ +LKK +L +NNIK+ + G L + ++++ + T NTGL
Sbjct: 78 PLDEVKSILNLLVYYLKKEVDNLNRNNIKLMITGEWQELPPRVRAEIEKSIELTSSNTGL 137
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY SR EI RA K++ + + SG + D+D L ++L T+ +PDPDL+IR G
Sbjct: 138 ILNVALNYGSRREIVRACKDVCRMVASGQLSPGDIDEKLFEQHLFTAGLPDPDLLIRPSG 197
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E RLS+FLLWQ AYSE F YWPDF RE +A+ Y R+RRFGGL+K
Sbjct: 198 ELRLSNFLLWQTAYSELWFCDTYWPDFKREDLINAILDYQRRERRFGGLTK 248
>gi|227544957|ref|ZP_03975006.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus reuteri
CF48-3A]
gi|300910012|ref|ZP_07127472.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus reuteri
SD2112]
gi|227185068|gb|EEI65139.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus reuteri
CF48-3A]
gi|300892660|gb|EFK86020.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus reuteri
SD2112]
Length = 259
Score = 228 bits (581), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 108/235 (45%), Positives = 156/235 (66%), Gaps = 3/235 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R LPR AGH++G++ +I AA+E+G+K L+++AFS NW+R
Sbjct: 25 PNHIAIIMDGNGRWAQKRHLPRVAGHKQGMQTVKKITIAASELGVKVLSLYAFSTENWKR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE+S L++L F L K+N+KV V+G+ L + +K+A T TG+
Sbjct: 85 PSSEVSYLMQLPVRFFSTFVPDLVKHNVKVTVMGDITQLPEATQKAVKDAMADTAHCTGM 144
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV---PDPDLIIR 187
L A NY SRDEI++A K I +D+++G++ D+D + KYL ++ + DPDL+IR
Sbjct: 145 ILNFALNYGSRDEITQAAKEIAEDVQNGNLALADIDEASFGKYLMSAQLGQFADPDLLIR 204
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
T GE+R+S+F+LWQ+AYSE F+PE+WPDF + A+ Y R RRFGGL +
Sbjct: 205 TSGEERISNFMLWQIAYSELEFVPEHWPDFDEDSLRSAIIAYQGRHRRFGGLKNQ 259
>gi|146297353|ref|YP_001181124.1| undecaprenyl diphosphate synthase [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145410929|gb|ABP67933.1| Undecaprenyl pyrophosphate synthetase [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 248
Score = 228 bits (581), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 148/231 (64%), Gaps = 1/231 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA RGLPR AGHR G + EI+ A E+G+K +T++AFS NW+R
Sbjct: 18 PRHIAIIMDGNGRWAKKRGLPRSAGHRFGAQKLREIILFADEIGLKYITVYAFSTENWKR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSL-KKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
P E+ L+ L++ F +L K I++RVIG+ LD DI + AE++T+ TG
Sbjct: 78 PKDEVENLMNLLREFFDTEIENLINKTQIRIRVIGDISKLDKDIQERIISAEERTKDKTG 137
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L + IA NY R EI A+KN+ DI+SG + ++ L YL T D+PDPDL+IR
Sbjct: 138 LCVVIALNYGGRSEIVNAVKNLALDIKSGKIDIEAINEELFKNYLYTKDIPDPDLLIRPS 197
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
GE R+S+FLLWQ++Y+EF F WPDF +E A+ Y R+RRFGG+
Sbjct: 198 GEMRVSNFLLWQISYTEFWFSNVLWPDFKKEHLLKAIEDYQKRERRFGGVK 248
>gi|229824927|ref|ZP_04450996.1| hypothetical protein GCWU000182_00276 [Abiotrophia defectiva ATCC
49176]
gi|229790930|gb|EEP27044.1| hypothetical protein GCWU000182_00276 [Abiotrophia defectiva ATCC
49176]
Length = 243
Score = 228 bits (580), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 111/235 (47%), Positives = 157/235 (66%), Gaps = 4/235 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ II+DGNGRWA RGLPR GH KG + + AA +GIK +T++AFS NW+R
Sbjct: 8 PTHVAIILDGNGRWAKKRGLPRNFGHLKGCDNVEPVCKAAFNIGIKYVTMYAFSTENWKR 67
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ EL+KL+ ++K KNN++VR+IG++ L D++ ++ E E+ + TGL
Sbjct: 68 PQAEVDELMKLLAKYMKDAMKLSVKNNMRVRIIGDKTGLSDELNKLITELEELSGDFTGL 127
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIE-SGSVCSHDVDS---SLIAKYLDTSDVPDPDLII 186
L IA NY RD+I RA KNI + + SG + DS +I+K LDT+D+PDPDL+I
Sbjct: 128 QLQIAVNYGGRDDIRRAFKNIILEADKSGKTYNELADSLTEEVISKNLDTADIPDPDLMI 187
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
RT GE+RLS++L+WQ+AY+E+ F WPDF ++ A+ Y+ RDRRFGGL K
Sbjct: 188 RTSGEQRLSNYLIWQLAYAEYFFTDTLWPDFGKKDLEEAIEFYSGRDRRFGGLKK 242
>gi|296330868|ref|ZP_06873343.1| undecaprenyl pyrophosphate synthase [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305674386|ref|YP_003866058.1| undecaprenyl pyrophosphate synthase [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296151873|gb|EFG92747.1| undecaprenyl pyrophosphate synthase [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305412630|gb|ADM37749.1| undecaprenyl pyrophosphate synthase [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 260
Score = 228 bits (580), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 108/235 (45%), Positives = 149/235 (63%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
++ P+HI IIMDGNGRWA R LPR AGH +G++V A E+G+K LT++AFS
Sbjct: 26 ILKGEIPEHIAIIMDGNGRWAKKRSLPRIAGHHEGMKVVKRTTKLANELGVKVLTLYAFS 85
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+ L+KL + FL L + N++VR+IG++ +L L +++A + T
Sbjct: 86 TENWKRPKMEVDFLMKLPEEFLNTYLPELVEENVQVRIIGDKTALPAHTLRAIEKAVEDT 145
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N G+ L A NY R EI A K + + ++ GS+ D+D SL + YL T + DP+L
Sbjct: 146 AQNDGMILNFALNYGGRTEIVTAAKTLAEKVKDGSLNIEDIDESLFSNYLMTESLQDPEL 205
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE RLS+F+LWQVAYSEFVF WPDF + F AL +Y R RRFGG+
Sbjct: 206 LIRTSGEIRLSNFMLWQVAYSEFVFTDVLWPDFKEDHFLQALGEYQQRGRRFGGI 260
>gi|283856412|ref|YP_162887.2| undecaprenyl pyrophosphate synthase [Zymomonas mobilis subsp.
mobilis ZM4]
gi|292495052|sp|Q9X5F1|UPPS_ZYMMO RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|283775412|gb|AAV89776.2| undecaprenyl diphosphate synthase [Zymomonas mobilis subsp. mobilis
ZM4]
Length = 248
Score = 228 bits (580), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 152/229 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA+AR LPR AGH+KG + V AAAE+GI+ LT++AFS NWRR
Sbjct: 20 PRHVAIIMDGNGRWASARHLPRIAGHKKGADAVKTTVRAAAEMGIEVLTLYAFSSENWRR 79
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE+++L+ L++ L++ +++K+ I ++VIG+ LD D++ +L +A + T NT L
Sbjct: 80 PASEVADLMGLLRLCLRQEMHNIKERGICLKVIGDYTRLDQDLVALLNQAIEITANNTRL 139
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY ++DE+ K I + + G + ++D I L T D+P DL+IRT G
Sbjct: 140 TLVFALNYGAQDELVHVTKRIAEKAKEGQLDPENIDVGTIESLLYTHDLPPLDLVIRTSG 199
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
EKRLS+FLLWQ AY+E +FI WPDF E A+ +Y R+RR+GGL
Sbjct: 200 EKRLSNFLLWQAAYAELLFIDTLWPDFGSETLKAAVEEYARRERRYGGL 248
>gi|326794439|ref|YP_004312259.1| undecaprenyl pyrophosphate synthase [Marinomonas mediterranea
MMB-1]
gi|326545203|gb|ADZ90423.1| Undecaprenyl pyrophosphate synthase [Marinomonas mediterranea
MMB-1]
Length = 242
Score = 228 bits (580), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 108/232 (46%), Positives = 149/232 (64%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+S+ P H+ IIMDGN RWA + LP AGH G V AAA G+K +T+FAFS
Sbjct: 10 ASTVPQHVAIIMDGNNRWAKKKLLPSIAGHTAGASAVRRTVEAAARAGVKVVTLFAFSSE 69
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW+RP E+ L+ L L+K L + NI++RV+GN+ + + + EAE T
Sbjct: 70 NWKRPKLEVDGLMNLFMRSLRKEVKRLNEYNIQLRVVGNKQGFSEKLQHQIMEAEQSTSR 129
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N G+ L IA NY R +I+ A+K + +D G+V D+D L+AKY+ SD+P+PDL+I
Sbjct: 130 NDGMVLVIAANYGGRWDIAEAMKGLARDAIEGTVSVDDIDELLLAKYMQLSDLPEPDLLI 189
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
RT GE+R+S+FLLWQ+AY+EFVF+P WPDFS + F AL+ Y R RR+GG
Sbjct: 190 RTSGEERVSNFLLWQLAYAEFVFLPVLWPDFSEQHFAEALSIYQSRQRRYGG 241
>gi|126726887|ref|ZP_01742726.1| undecaprenyl diphosphate synthase [Rhodobacterales bacterium
HTCC2150]
gi|126703845|gb|EBA02939.1| undecaprenyl diphosphate synthase [Rhodobacterales bacterium
HTCC2150]
Length = 238
Score = 228 bits (580), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 102/234 (43%), Positives = 152/234 (64%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ P+H+ IIMDGNGRWA +G PR GH+ G EIV A ++G++ ++IFAFS
Sbjct: 4 QKTGPNHVAIIMDGNGRWAVQKGRPRLFGHQAGARRVREIVEACPDLGVRYVSIFAFSTE 63
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW+R +E++ L+ L + ++ K + ++VR IG+R+ LD + ++ E E+ T+
Sbjct: 64 NWKRTQTEVAGLMALFRRYIAKEMQEFMRQGVRVRFIGDRIKLDRKLRELMDEVEELTKA 123
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NT +L IA NY RDE++RA + + +D+ G + VD + +A+YLDT +PDPDL+I
Sbjct: 124 NTLTDLTIALNYGGRDEVARASRRMARDVALGKIDPETVDETTLARYLDTCFLPDPDLVI 183
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RT GE R+S+FLLWQ AY+E+ FI WPDF+ E+F + QY R RRFG +S
Sbjct: 184 RTSGEARISNFLLWQSAYAEYEFIDTLWPDFTPEIFQGLIEQYAGRSRRFGAVS 237
>gi|148380388|ref|YP_001254929.1| undecaprenyl diphosphate synthase [Clostridium botulinum A str.
ATCC 3502]
gi|153930833|ref|YP_001384606.1| undecaprenyl diphosphate synthase [Clostridium botulinum A str.
ATCC 19397]
gi|153937234|ref|YP_001388122.1| undecaprenyl diphosphate synthase [Clostridium botulinum A str.
Hall]
gi|168180689|ref|ZP_02615353.1| undecaprenyl diphosphate synthase [Clostridium botulinum NCTC 2916]
gi|148289872|emb|CAL83980.1| undecaprenyl pyrophosphate synthetase [Clostridium botulinum A str.
ATCC 3502]
gi|152926877|gb|ABS32377.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum A
str. ATCC 19397]
gi|152933148|gb|ABS38647.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum A
str. Hall]
gi|182668409|gb|EDT80388.1| undecaprenyl diphosphate synthase [Clostridium botulinum NCTC 2916]
Length = 252
Score = 228 bits (580), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 109/229 (47%), Positives = 148/229 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR GH+ G+E EIV +G+K LT++AFS NW+R
Sbjct: 23 PKHIAIIMDGNGRWAKERSLPRTMGHKAGVETIREIVKECNNLGVKYLTLYAFSTENWKR 82
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L+ +L+K L +NN+ V IGN L + + L++A ++T+ NTGL
Sbjct: 83 PKDEVSALMTLLVQYLRKEVKELNENNVIVNAIGNIEKLPEVCIKELEKAYEETKDNTGL 142
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY RDEI RA+K +++DI+ G + D++ ++ YL T + DPDLIIR G
Sbjct: 143 VLNLALNYGGRDEIIRAVKYMYEDIKVGKIKEEDINEENLSDYLYTKGMLDPDLIIRPSG 202
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
EKR+S+FLLWQ AYSEF + WPDF +E A+ Y RDRRFG +
Sbjct: 203 EKRISNFLLWQCAYSEFWYSDIKWPDFKKEHLHKAIYDYQNRDRRFGTV 251
>gi|153940911|ref|YP_001391729.1| undecaprenyl diphosphate synthase [Clostridium botulinum F str.
Langeland]
gi|152936807|gb|ABS42305.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum F
str. Langeland]
gi|295319755|gb|ADG00133.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum F
str. 230613]
Length = 252
Score = 228 bits (580), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 109/230 (47%), Positives = 148/230 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR GH+ G+E EIV +G+K LT++AFS NW+R
Sbjct: 23 PKHIAIIMDGNGRWAKERSLPRTMGHKAGVETIREIVKECNNLGVKYLTLYAFSTENWKR 82
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L+ +L+K L +NN+ V IGN L + + L++A ++T+ NTGL
Sbjct: 83 PKDEVSALMTLLVQYLRKEVKELNENNVIVNTIGNIEKLPEVCIKELEKAYEETKDNTGL 142
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY RDEI RA+K +++DI+ G + D++ ++ YL T + DPDLIIR G
Sbjct: 143 VLNLALNYGGRDEIIRAVKYMYEDIKVGKIKEEDINEENLSDYLYTKGMLDPDLIIRPSG 202
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
EKR+S+FLLWQ AYSEF + WPDF +E A+ Y RDRRFG +
Sbjct: 203 EKRISNFLLWQCAYSEFWYSDIKWPDFKKEHLHKAIYDYQNRDRRFGTVK 252
>gi|229098292|ref|ZP_04229239.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus Rock3-29]
gi|229104385|ref|ZP_04235054.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus Rock3-28]
gi|229117309|ref|ZP_04246687.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus Rock1-3]
gi|228666209|gb|EEL21673.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus Rock1-3]
gi|228679083|gb|EEL33291.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus Rock3-28]
gi|228685190|gb|EEL39121.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus Rock3-29]
Length = 235
Score = 228 bits (580), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 103/229 (44%), Positives = 151/229 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R +PR AGH +G++V +I A+++ +K LT++AFS NW+R
Sbjct: 7 PEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLNVKVLTLYAFSTENWKR 66
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L + FL L + N++VRVIG + L +++A + T+ NTGL
Sbjct: 67 PKKEVDYLMRLPEEFLGTFLPELIEENVQVRVIGQKDRLPTHTRRAMEKAMEDTQENTGL 126
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY SRDEI A++++ +D E G + + ++ +I+ YL T +PDP+L+IRT G
Sbjct: 127 ILNFALNYGSRDEIVSAVQHMMKDSEEGKIRAEEISEEMISSYLMTGSLPDPELLIRTSG 186
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+F+LWQ+AYSEF F YWPDF+ E A+ + R RRFGG+
Sbjct: 187 ELRISNFMLWQIAYSEFWFTDVYWPDFTEEHLLSAITDFQHRGRRFGGV 235
>gi|295399843|ref|ZP_06809824.1| undecaprenyl diphosphate synthase [Geobacillus thermoglucosidasius
C56-YS93]
gi|312111645|ref|YP_003989961.1| undecaprenyl diphosphate synthase [Geobacillus sp. Y4.1MC1]
gi|294978246|gb|EFG53843.1| undecaprenyl diphosphate synthase [Geobacillus thermoglucosidasius
C56-YS93]
gi|311216746|gb|ADP75350.1| undecaprenyl diphosphate synthase [Geobacillus sp. Y4.1MC1]
Length = 258
Score = 227 bits (579), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 151/229 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R LPR AGH +G++V +I A E+GIK L+++AFS NW+R
Sbjct: 30 PKHVAIIMDGNGRWAKKRALPRAAGHYEGMQVVRKITRFANELGIKILSLYAFSTENWKR 89
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE+ L+KL + FL L + N+ VRVIGN L + +++A ++T+ NTGL
Sbjct: 90 PKSEVEYLMKLPEQFLTTFLPELIEENVNVRVIGNTEQLPEHTRRAVEKAINETKDNTGL 149
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY SR EI+ A++ I +DI++G + + L++ YL T D+ DPDL+IRT G
Sbjct: 150 ILNFALNYGSRAEITYAVQQIAKDIQNGRLSPEQITEELVSSYLMTKDLMDPDLLIRTSG 209
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+F+LWQ+AY+EF F WPDF+ + A+ + R+RRFGG+
Sbjct: 210 EIRLSNFMLWQLAYTEFWFTDVLWPDFTEQHLLEAIAAFQKRNRRFGGV 258
>gi|241762002|ref|ZP_04760086.1| undecaprenyl diphosphate synthase [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|260752419|ref|YP_003225312.1| undecaprenyl pyrophosphate synthase [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
gi|241373468|gb|EER63055.1| undecaprenyl diphosphate synthase [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|258551782|gb|ACV74728.1| undecaprenyl diphosphate synthase [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
Length = 248
Score = 227 bits (579), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 151/229 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA+AR LPR AGH+KG + V AAAE+GI+ LT++AFS NWRR
Sbjct: 20 PRHVAIIMDGNGRWASARHLPRIAGHKKGADAVKTTVRAAAEMGIEVLTLYAFSSENWRR 79
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE+++L+ L++ L++ +++K+ I ++VIG+ LD D++ +L +A + T NT L
Sbjct: 80 PASEVADLMGLLRLCLRQEMHNIKERGICLKVIGDYTRLDQDLVALLNQAIEITANNTRL 139
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY ++DE+ K I + G + ++D I L T D+P DL+IRT G
Sbjct: 140 TLVFALNYGAQDELVHVTKRIAEKAREGQLDPENIDVGTIESLLYTHDLPPLDLVIRTSG 199
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
EKRLS+FLLWQ AY+E +FI WPDF E A+ +Y R+RR+GGL
Sbjct: 200 EKRLSNFLLWQAAYAELLFIDTLWPDFGSETLKAAVEEYARRERRYGGL 248
>gi|114566421|ref|YP_753575.1| di-trans,poly-cis-decaprenylcistransferase [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
gi|114337356|gb|ABI68204.1| Undecaprenyl pyrophosphate synthetase [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
Length = 257
Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 108/231 (46%), Positives = 143/231 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR GHR G+ E+V A ++VG+ LT+FAFS NW+R
Sbjct: 19 PQHIAIIMDGNGRWANKRLLPRTMGHRAGMSSLKEVVRACSDVGVSTLTVFAFSTENWKR 78
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P+ E+ L+KL+ +L + L N +++ V+G+ SL + EA TR NTGL
Sbjct: 79 PLQEVDYLMKLLVEYLHRELEELHANAVRINVLGDYNSLPHQCQLEITEALQITRNNTGL 138
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
IA NY SR EI A+K + + +G +C ++ A L TS +PDPDL+IRT G
Sbjct: 139 KFNIALNYGSRAEIIAAVKKLAAGLLAGEICLEEISEESFAACLTTSGMPDPDLLIRTAG 198
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E R+S+FLLWQ+AY+E WPDFSRE A+ Y R+RRFGGLS+
Sbjct: 199 EMRVSNFLLWQIAYTELWVTDCLWPDFSREHLMQAIWDYQHRERRFGGLSR 249
>gi|118443581|ref|YP_878218.1| undecaprenyl diphosphate synthase [Clostridium novyi NT]
gi|118134037|gb|ABK61081.1| undecaprenyl diphosphate synthase [Clostridium novyi NT]
Length = 252
Score = 227 bits (578), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 108/230 (46%), Positives = 151/230 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R LPR GH+ G+E EIV +++ +K LT++AFS NW+R
Sbjct: 23 PEHIAIIMDGNGRWAKKRKLPRTVGHKAGVETIREIVKECSKLNVKALTLYAFSTENWKR 82
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+KL+ +LKK L + N+ +R IG+ L L A ++T+ NTGL
Sbjct: 83 PKDEVSALMKLLVEYLKKELKELHEENVVIRYIGDISKLPKICQDELINASNRTQNNTGL 142
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY R+EI AIK+I + +++ ++ H++D S I ++L T ++ DPD+IIRT G
Sbjct: 143 ILNLALNYGGRNEIVNAIKSIAEKVKNNTLQIHEIDESTIEEFLYTKNLKDPDIIIRTAG 202
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E+RLS+FLLWQ AYSEF + WPDF ++ A+ Y RDRRFGGL
Sbjct: 203 EQRLSNFLLWQCAYSEFWYTDIKWPDFKKQDLLRAIYDYQNRDRRFGGLK 252
>gi|89068189|ref|ZP_01155599.1| undecaprenyl diphosphate synthase [Oceanicola granulosus HTCC2516]
gi|89046106|gb|EAR52164.1| undecaprenyl diphosphate synthase [Oceanicola granulosus HTCC2516]
Length = 242
Score = 227 bits (578), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 106/236 (44%), Positives = 153/236 (64%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+M + S P H+ +IMDGNGRWA RG PR GH G + EIV A ++G+K LTIFAF
Sbjct: 5 TMNTPSGPRHVAVIMDGNGRWAQQRGKPRLFGHHAGAKRVREIVEACPDLGVKYLTIFAF 64
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R SE++ L+ L + ++++ L ++VR IG+R+ LDD ++ ++ + E
Sbjct: 65 STENWKRTQSEVAGLMGLFRRYIEREARDLFNRGVRVRFIGDRIRLDDKLVAMMDDLELL 124
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T N ++L IA NY RDE++RA + + +IE G + DVD+ +A++LDT +PDPD
Sbjct: 125 TSGNDRVHLTIALNYGGRDEVTRAAQRLAVEIEQGRLNHKDVDAETLARFLDTRFLPDPD 184
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
L+IRT GE R+S+FLLWQ AY+E+ FI WPDF+ F + Y RDRRFG +
Sbjct: 185 LVIRTSGEARISNFLLWQSAYAEYEFIDTLWPDFTDAEFARIVGHYAQRDRRFGAV 240
>gi|194467739|ref|ZP_03073725.1| undecaprenyl diphosphate synthase [Lactobacillus reuteri 100-23]
gi|194452592|gb|EDX41490.1| undecaprenyl diphosphate synthase [Lactobacillus reuteri 100-23]
Length = 254
Score = 227 bits (578), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 108/235 (45%), Positives = 155/235 (65%), Gaps = 3/235 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH++G++ +I AA+E+G+K L+++AFS NW+R
Sbjct: 20 PKHIAIIMDGNGRWAQKRHLPRVAGHKQGMQTVKKITIAASELGVKVLSLYAFSTENWKR 79
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE+S L++L F L K+N+KV V+G+ L + +K+A T TG+
Sbjct: 80 PSSEVSYLMQLPVRFFSTFVPDLVKHNVKVTVMGDITQLPEATQKAVKDAMADTAHCTGM 139
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV---PDPDLIIR 187
L A NY SRDEI++A K I +D+++G++ D+D + KYL ++ + DPDL+IR
Sbjct: 140 ILNFALNYGSRDEITQAAKKIAEDVQNGNLALADIDEASFGKYLMSAQLGQFADPDLLIR 199
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
T GE+R+S+F+LWQ+AYSE F+PE+WPDF + A+ Y R RRFGGL +
Sbjct: 200 TSGEERISNFMLWQIAYSELEFVPEHWPDFDEDSLRSAIIAYQGRHRRFGGLKNQ 254
>gi|295110295|emb|CBL24248.1| undecaprenyl diphosphate synthase [Ruminococcus obeum A2-162]
Length = 235
Score = 227 bits (578), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 106/229 (46%), Positives = 151/229 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI II+DGNGRWA A+G+PR GH KG +I ++G+K LT++AFS NW+R
Sbjct: 4 PNHIAIILDGNGRWAKAKGMPRGYGHIKGCANLEDICDDIKDLGVKYLTVYAFSTENWKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+KL +S+LKK S +KN+++V++IG+ + DI ++E E+ ++ L
Sbjct: 64 SREEVEGLMKLFRSYLKKCMKSAEKNHMRVKIIGDPSAFAPDIQDKIRELEEFSKDYDEL 123
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
IA NY SRDEI R ++ + QD+ G ++D YLDT+ VPDPDL+IRT G
Sbjct: 124 YFQIALNYGSRDEIIRGVRKLAQDVADGKCDPAEIDEPFFESYLDTAGVPDPDLLIRTSG 183
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+RLS+FL+WQ+AY+EF F WPDF +E A+ +YN RDRRFGG+
Sbjct: 184 EQRLSNFLMWQLAYTEFYFTDVPWPDFHKEDLIKAIEKYNSRDRRFGGV 232
>gi|320547756|ref|ZP_08042040.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus equinus
ATCC 9812]
gi|320447516|gb|EFW88275.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus equinus
ATCC 9812]
Length = 251
Score = 227 bits (578), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 109/233 (46%), Positives = 147/233 (63%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HIGIIMDGNGRWA R PR GH+ G++ ++ AA+E+G+K LT++AFS NW R
Sbjct: 19 PNHIGIIMDGNGRWAKKRMQPRVMGHKAGMDALQDVTIAASELGVKVLTVYAFSTENWSR 78
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ ++ L F K L +NN++V+VIG L D +K A DQT+ N+GL
Sbjct: 79 PEDEVKFIMNLPVEFFDKYVPQLDENNVRVQVIGETNRLPKDTYDAMKRACDQTKHNSGL 138
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI+ A+KNI Q++ + D+ +I+ +L T+ +P DPDLII
Sbjct: 139 ILNFALNYGGRSEITEAVKNIAQEVLEAKISPDDITEDVISNHLMTNHLPYLYRDPDLII 198
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSEF F P WPDF ++ A+ +YN R RRFGG+
Sbjct: 199 RTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKDELIKAIAEYNQRHRRFGGI 251
>gi|304384316|ref|ZP_07366727.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella marshii DSM
16973]
gi|304334632|gb|EFM00914.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella marshii DSM
16973]
Length = 245
Score = 226 bits (577), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 149/232 (64%), Gaps = 2/232 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWAA R PR GHR G+E I + +G+K LT++ FS NW R
Sbjct: 11 PRHIAIIMDGNGRWAAERKQPRSYGHRMGVETVRRITSECTRLGVKYLTLYTFSTENWNR 70
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EIS L+ L+ S L+ + KNN++ +VIG+ L +++ C L+E + T NT +
Sbjct: 71 PAEEISALMGLVLSSLEDEIF--MKNNVRFQVIGDMRRLPEEVQCKLQETMEHTAGNTAM 128
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ +A +YSS+ EI+ A++NI ++++ G + +D + K+L+T+ +PDP+L+IRTGG
Sbjct: 129 TMVVALSYSSKWEITNAVRNIAKEVKEGQMALEAIDEEAVTKHLNTAFMPDPELLIRTGG 188
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AY+E F YWPDFS + A+ Y R RRFG ++
Sbjct: 189 ELRISNFLLWQIAYAELYFCDTYWPDFSEQELREAIASYQRRQRRFGKTEEQ 240
>gi|170760817|ref|YP_001787742.1| undecaprenyl diphosphate synthase [Clostridium botulinum A3 str.
Loch Maree]
gi|169407806|gb|ACA56217.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum
A3 str. Loch Maree]
Length = 252
Score = 226 bits (577), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 111/230 (48%), Positives = 150/230 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR GH+ G+E EIV +G+K LT++AFS NW+R
Sbjct: 23 PKHIAIIMDGNGRWAKERSLPRTMGHKAGVETIREIVKECNNLGVKYLTLYAFSTENWKR 82
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L+ +L+K L +NN+ V IGN L + + L++A ++T+ NTGL
Sbjct: 83 PKDEVSALMTLLVQYLRKEVKELNENNVIVNAIGNIEKLPEVCIKELEKAYEETKDNTGL 142
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY RDEI RA+K +++DI+ G + +++ LI+ YL T D+ DPDLIIR G
Sbjct: 143 VLNLALNYGGRDEIIRAVKYMYEDIKVGKIKEEEINEELISNYLYTKDMLDPDLIIRPSG 202
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
EKR+S+FLLWQ AYSEF + WPDF +E A+ Y RDRRFG +
Sbjct: 203 EKRISNFLLWQCAYSEFWYSDIKWPDFKKEHLHKAIYDYQNRDRRFGTVK 252
>gi|226949784|ref|YP_002804875.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum
A2 str. Kyoto]
gi|226842308|gb|ACO84974.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum
A2 str. Kyoto]
Length = 252
Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 109/230 (47%), Positives = 147/230 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR GH+ G+E EIV +G+K LT++AFS NW+R
Sbjct: 23 PKHIAIIMDGNGRWAKERSLPRTMGHKAGVETIREIVKECNNLGVKYLTLYAFSTENWKR 82
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L+ +L+K L +NN+ V IGN L + + L++A ++T+ NTGL
Sbjct: 83 PKDEVSALMTLLVQYLRKEVKELNENNVIVNAIGNIEKLPEVCIKELEKAYEETKDNTGL 142
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY RDEI RA+K +++DI+ G + D++ + YL T + DPDLIIR G
Sbjct: 143 VLNLALNYGGRDEIIRAVKYMYEDIKVGKIKEEDINEENLPDYLYTKGMLDPDLIIRPSG 202
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
EKR+S+FLLWQ AYSEF + WPDF +E A+ Y RDRRFG +
Sbjct: 203 EKRISNFLLWQCAYSEFWYSDIKWPDFKKEHLHKAIYDYQNRDRRFGTVK 252
>gi|251797407|ref|YP_003012138.1| undecaprenyl diphosphate synthase [Paenibacillus sp. JDR-2]
gi|247545033|gb|ACT02052.1| undecaprenyl diphosphate synthase [Paenibacillus sp. JDR-2]
Length = 254
Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 147/229 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA RGLPR AGH G++ IV A +G+K LT++AFS NW+R
Sbjct: 26 PKHIAIIMDGNGRWAKKRGLPRIAGHHTGMKTVKRIVMEADRLGVKYLTLYAFSTENWKR 85
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL + FL+ L + N++VR++G++ +L L ++EA +T NTGL
Sbjct: 86 PKDEVEFLMKLPQQFLEIELAELIEKNVQVRMMGHKENLPSFTLSAVEEAITKTANNTGL 145
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY R E+ AIK I D++ G + + +D L++ L + D+PDPDL+IRT G
Sbjct: 146 VLNFALNYGGRREMLEAIKEIAADVQDGRLSTEQIDEQLLSSRLLSGDIPDPDLLIRTSG 205
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+F+LWQ+AYSE F YWP+FS A+ +Y R RR+GGL
Sbjct: 206 ELRLSNFMLWQLAYSEMWFTNVYWPEFSEAHLQEAIQEYQRRARRYGGL 254
>gi|187778976|ref|ZP_02995449.1| hypothetical protein CLOSPO_02571 [Clostridium sporogenes ATCC
15579]
gi|187772601|gb|EDU36403.1| hypothetical protein CLOSPO_02571 [Clostridium sporogenes ATCC
15579]
Length = 252
Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 110/229 (48%), Positives = 150/229 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR GH+ G+E EIV ++G+K LT++AFS NW+R
Sbjct: 23 PKHIAIIMDGNGRWAKERSLPRTMGHKAGVETIREIVKECDKLGVKYLTLYAFSTENWKR 82
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L+ +L+K L +NN+ V IG+ L + + L++A ++T+ NTGL
Sbjct: 83 PKDEVSALMTLLVQYLRKEVKELNENNVIVNAIGDMEKLPEMCIKELEKAYEETKNNTGL 142
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY RDEI RA+K I++DI +G + +++ LI+ YL T + DPDLIIR G
Sbjct: 143 VLNLALNYGGRDEIIRAVKYIYEDITAGKIKEEEINEELISNYLYTKGMADPDLIIRPSG 202
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
EKR+S+FLLWQ AYSEF + WPDF +E A+ Y RDRRFG +
Sbjct: 203 EKRISNFLLWQCAYSEFWYSDIKWPDFKKEHLHKAIYDYQNRDRRFGSV 251
>gi|239626442|ref|ZP_04669473.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239516588|gb|EEQ56454.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 239
Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 105/227 (46%), Positives = 145/227 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +I+DGNGRWA RGLPR GH++G + V AA +GI+ LT++ FS NW+R
Sbjct: 10 PGHVALILDGNGRWAKRRGLPRTMGHKEGCVTVEKTVEIAARMGIRYLTVYGFSTENWKR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L++L + ++ + NN++VR+IG+R DI+ + E QT+ NTGL
Sbjct: 70 SAEEVGALMQLFRYYMVRLLKIASANNVRVRMIGDRSRFAADIIEGINRLESQTKDNTGL 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
IA NY RDEI RA + +D G V + +D SL + YLDT+ +PDPDL+IRT G
Sbjct: 130 TFVIAVNYGGRDEIRRAAARLAKDCADGKVDTDQIDESLFSSYLDTAGMPDPDLLIRTSG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E RLS++LLWQ+AY+E V WPDF++E A+ QYN RDRRFG
Sbjct: 190 ELRLSNYLLWQLAYTEIVVTDCLWPDFNQEELEKAIVQYNKRDRRFG 236
>gi|182417571|ref|ZP_02948896.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium butyricum
5521]
gi|237667899|ref|ZP_04527883.1| undecaprenyl pyrophosphate synthetase 1 [Clostridium butyricum E4
str. BoNT E BL5262]
gi|182378584|gb|EDT76112.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium butyricum
5521]
gi|237656247|gb|EEP53803.1| undecaprenyl pyrophosphate synthetase 1 [Clostridium butyricum E4
str. BoNT E BL5262]
Length = 253
Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 109/227 (48%), Positives = 143/227 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R LPR GH+ G+E I+ A +G+KNLT++AFS NW R
Sbjct: 24 PNHIAIIMDGNGRWAKERMLPRSMGHKAGVETIRRILKEATRLGVKNLTLYAFSTENWGR 83
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL+ ++L+K KN +++ V G+ L + L +A + T+ NT +
Sbjct: 84 PKDEVGALMKLLVTYLRKELDECHKNGVRMNVFGDTTQLPKECQEALDDALETTKNNTRI 143
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL A NY RDEI RAIK ++ DI + D++S LI YL T +PDPDLIIR G
Sbjct: 144 NLNFALNYGGRDEIIRAIKLMYSDINKNIIKEEDINSELIENYLYTKGIPDPDLIIRPSG 203
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+RLS+FLLWQ AYSEF + WPDF E A++ Y RDRRFG
Sbjct: 204 EQRLSNFLLWQCAYSEFWYSDINWPDFKEEDLRRAISDYQNRDRRFG 250
>gi|184153318|ref|YP_001841659.1| undecaprenyl diphosphate synthase [Lactobacillus reuteri JCM 1112]
gi|183224662|dbj|BAG25179.1| undecaprenyl diphosphate synthase [Lactobacillus reuteri JCM 1112]
Length = 259
Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 107/235 (45%), Positives = 156/235 (66%), Gaps = 3/235 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R LPR AGH++G++ +I AA+E+G+K L+++AFS NW+R
Sbjct: 25 PNHIAIIMDGNGRWAQKRHLPRVAGHKQGMQTVKKITIAASELGVKVLSLYAFSTENWKR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE+S L++L F L K+N+KV V+G+ L + +K+A T TG+
Sbjct: 85 PSSEVSYLMQLPVRFFSTFVPDLVKHNVKVTVMGDITQLPEATQKAVKDAMADTAHCTGM 144
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV---PDPDLIIR 187
L A NY SRDEI++A K I +D+++G++ D+D + KYL ++ + +PDL+IR
Sbjct: 145 ILNFALNYGSRDEITQAAKKIAEDVQNGNLALADIDEASFGKYLMSTQLGQFANPDLLIR 204
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
T GE+R+S+F+LWQ+AYSE F+PE+WPDF + A+ Y R RRFGGL +
Sbjct: 205 TSGEERISNFMLWQIAYSELEFVPEHWPDFDEDSLRSAIIAYQGRHRRFGGLKNQ 259
>gi|148543922|ref|YP_001271292.1| undecaprenyl pyrophosphate synthetase [Lactobacillus reuteri DSM
20016]
gi|227364831|ref|ZP_03848878.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus reuteri
MM2-3]
gi|325682543|ref|ZP_08162060.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus reuteri
MM4-1A]
gi|148530956|gb|ABQ82955.1| Undecaprenyl pyrophosphate synthetase [Lactobacillus reuteri DSM
20016]
gi|227070094|gb|EEI08470.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus reuteri
MM2-3]
gi|324978382|gb|EGC15332.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus reuteri
MM4-1A]
Length = 270
Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 107/235 (45%), Positives = 156/235 (66%), Gaps = 3/235 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R LPR AGH++G++ +I AA+E+G+K L+++AFS NW+R
Sbjct: 36 PNHIAIIMDGNGRWAQKRHLPRVAGHKQGMQTVKKITIAASELGVKVLSLYAFSTENWKR 95
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE+S L++L F L K+N+KV V+G+ L + +K+A T TG+
Sbjct: 96 PSSEVSYLMQLPVRFFSTFVPDLVKHNVKVTVMGDITQLPEATQKAVKDAMADTAHCTGM 155
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV---PDPDLIIR 187
L A NY SRDEI++A K I +D+++G++ D+D + KYL ++ + +PDL+IR
Sbjct: 156 ILNFALNYGSRDEITQAAKKIAEDVQNGNLALADIDEASFGKYLMSTQLGQFANPDLLIR 215
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
T GE+R+S+F+LWQ+AYSE F+PE+WPDF + A+ Y R RRFGGL +
Sbjct: 216 TSGEERISNFMLWQIAYSELEFVPEHWPDFDEDSLRSAIIAYQGRHRRFGGLKNQ 270
>gi|94991253|ref|YP_599353.1| undecaprenyl pyrophosphate synthase [Streptococcus pyogenes
MGAS10270]
gi|94544761|gb|ABF34809.1| Undecaprenyl pyrophosphate synthetase [Streptococcus pyogenes
MGAS10270]
Length = 249
Score = 226 bits (576), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/233 (48%), Positives = 144/233 (61%), Gaps = 4/233 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P HIGIIMDGNGRWA R PR GH+ G++ E+ A+E+G+K LT++AFS NW
Sbjct: 15 SIPKHIGIIMDGNGRWAKKRLKPRVFGHKAGMDALQEVTITASELGVKVLTVYAFSTENW 74
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+S ++ L +F K L +NN+K+++IG L +D L L A D+T+ NT
Sbjct: 75 SRPQDEVSFIMNLPVTFFDKYVPVLHENNVKIQMIGETSRLPEDTLAALNAAIDKTKRNT 134
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDL 184
GL L A NY R EI+ A++ I QD+ + D+ LIA YL T +P DPDL
Sbjct: 135 GLILNFALNYGGRAEITSAVRFIAQDVLDAKLNPGDITEDLIANYLMTDHLPYLYRDPDL 194
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IIRT GE RLS+FLLWQ AYSEF F P WPDF + A+ YN R RRFG
Sbjct: 195 IIRTSGELRLSNFLLWQSAYSEFYFTPVLWPDFKKAELLKAIADYNRRQRRFG 247
>gi|188586059|ref|YP_001917604.1| Undecaprenyl pyrophosphate synthetase [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179350746|gb|ACB85016.1| Undecaprenyl pyrophosphate synthetase [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 247
Score = 226 bits (576), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 102/230 (44%), Positives = 150/230 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA +R LPR AGHR G+E + + E+GI+ +T+FAFS NW+R
Sbjct: 17 PRHIAIIMDGNGRWAKSRALPRIAGHRAGVEAIKRVSEISQEIGIEIITMFAFSTENWKR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L K +LKK +LK+NNIK+ ++G+ ++ L V+++ ++T+ NT L
Sbjct: 77 PKKEVEFLMSLPKEYLKKELQNLKENNIKITIMGDTSAIPAKTLEVIEQGVEETKNNTAL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL A NY R EI +A++ I + + +I+++L ++PDPDL+IR+ G
Sbjct: 137 NLNFALNYGGRAEIVQAVRKIAAKASDREIDPKTISEDIISQHLYNPEIPDPDLMIRSSG 196
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E+RLS+FLLWQ+AYSE F YWPDF +E A+ Y R+R+FGG++
Sbjct: 197 EQRLSNFLLWQLAYSELWFPEVYWPDFQKEHLLQAVLAYQNRERKFGGVN 246
>gi|83942311|ref|ZP_00954772.1| undecaprenyl diphosphate synthase [Sulfitobacter sp. EE-36]
gi|83955547|ref|ZP_00964178.1| undecaprenyl diphosphate synthase [Sulfitobacter sp. NAS-14.1]
gi|83840191|gb|EAP79366.1| undecaprenyl diphosphate synthase [Sulfitobacter sp. NAS-14.1]
gi|83846404|gb|EAP84280.1| undecaprenyl diphosphate synthase [Sulfitobacter sp. EE-36]
Length = 247
Score = 226 bits (576), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 105/230 (45%), Positives = 148/230 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG PR GH G + EIV A + G++ LTIFAFS NW+R
Sbjct: 17 PRHVAIIMDGNGRWATQRGRPRLFGHHAGAKRVREIVEACPDFGVEYLTIFAFSTENWKR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E++ L+ L + ++ K +LK ++VR IG+R+ LD ++ ++ E +T NT
Sbjct: 77 TQVEVAGLMSLFRRYITKETKALKAKGVRVRFIGDRVRLDAKLVKLMNVLEAETAENTRT 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L IA NY RDE++RA + + QD+ +G + DVD + +YLDT +PDPDL+IRT G
Sbjct: 137 HLTIALNYGGRDEVARATQRLAQDVAAGLLSPEDVDEETLPRYLDTHVLPDPDLVIRTSG 196
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E R+S+FLLWQ AY+E+ FI WPDF++ F + + RDRRFG +S
Sbjct: 197 EARISNFLLWQSAYAEYEFIDTLWPDFTKAEFGNLCAAFGNRDRRFGAVS 246
>gi|239826647|ref|YP_002949271.1| undecaprenyl pyrophosphate synthase [Geobacillus sp. WCH70]
gi|239806940|gb|ACS24005.1| undecaprenyl diphosphate synthase [Geobacillus sp. WCH70]
Length = 258
Score = 226 bits (575), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 106/236 (44%), Positives = 153/236 (64%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+M + P H+ IIMDGNGRWA R LPR AGH +G++V +I A E+GIK L+++AF
Sbjct: 23 EIMQNPIPKHVAIIMDGNGRWAKKRALPRAAGHYEGMQVVRKITRFANELGIKILSLYAF 82
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP SE+ L+KL + FL L + N+ VRVIG+ L + ++ A D+
Sbjct: 83 STENWKRPKSEVDYLMKLPEQFLTTFLPELAEENVNVRVIGHIERLPEHTRRAVERAIDE 142
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NTGL L A NY SR EI+ A++ I ++++ G + ++ L++ YL T D+ DPD
Sbjct: 143 TKENTGLILNFALNYGSRAEITYAMQQIAKEVQKGWLSPEEITEELVSSYLMTKDLTDPD 202
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
L+IRT GE RLS+F+LWQ+AY+EF F WPDF+ + A+ + R+RRFGG+
Sbjct: 203 LLIRTSGEIRLSNFMLWQLAYTEFWFTDVLWPDFTEQHLLEAIAAFQKRNRRFGGV 258
>gi|329116210|ref|ZP_08244927.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
parauberis NCFD 2020]
gi|326906615|gb|EGE53529.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
parauberis NCFD 2020]
Length = 249
Score = 226 bits (575), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 112/233 (48%), Positives = 146/233 (62%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA R PR GH+ G++ E+ AA+++GIK LT++AFS NW R
Sbjct: 17 PKHIGIIMDGNGRWAKKRLKPRIFGHKAGMDALQEVTIAASDLGIKVLTVYAFSTENWSR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ ++ L F K L KNN+++++IG L + L L A ++TR N+GL
Sbjct: 77 PEDEVNFIMNLPVEFFDKYVPELNKNNVRIQMIGETHRLPEATLTALNNAIERTRRNSGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI+ A++NI QD+ ++ D+ LIA YL T +P DPD II
Sbjct: 137 ILNFALNYGGRAEITLAVRNIAQDVLDANLNPGDITEDLIANYLMTDHLPYLYRDPDYII 196
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSEF F P WPDF +E AL +YN R RRFGG+
Sbjct: 197 RTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKQEQLIEALEEYNRRQRRFGGV 249
>gi|260588562|ref|ZP_05854475.1| di-trans,poly-cis-decaprenylcistransferase [Blautia hansenii DSM
20583]
gi|331082135|ref|ZP_08331263.1| di-trans,poly-cis-decaprenylcistransferase [Lachnospiraceae
bacterium 6_1_63FAA]
gi|260541037|gb|EEX21606.1| di-trans,poly-cis-decaprenylcistransferase [Blautia hansenii DSM
20583]
gi|330405730|gb|EGG85260.1| di-trans,poly-cis-decaprenylcistransferase [Lachnospiraceae
bacterium 6_1_63FAA]
Length = 235
Score = 225 bits (574), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 103/232 (44%), Positives = 154/232 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ II+DGNGRWA A+G+PR GH KG E +I A ++G+K LT++AFS NW+R
Sbjct: 4 PRHVAIILDGNGRWAKAKGMPRTYGHIKGCENLEKICGIAKDLGVKYLTVYAFSTENWKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+KL ++++K+ + N + VRVIG+ D D+ +KE E+ + L
Sbjct: 64 SKEEVDGLMKLFRNYMKRCIQISRDNKMCVRVIGDPSMFDADLQQKIKELEEYSSQFDEL 123
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ IA NY SRDEI RA+ + +D+E G + + +I+ YLDT +PDPDL+IRT G
Sbjct: 124 HFQIALNYGSRDEIKRAMVRMAEDVEKGVLLPQQITEDVISDYLDTRALPDPDLLIRTSG 183
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+RLS+FL+WQ+AY+EF F WPDF ++ F A++++N RDRR+GG+ ++
Sbjct: 184 EERLSNFLMWQLAYTEFYFTDVAWPDFDKKEFEKAIDKFNHRDRRYGGVKEE 235
>gi|210622739|ref|ZP_03293331.1| hypothetical protein CLOHIR_01279 [Clostridium hiranonis DSM 13275]
gi|210154071|gb|EEA85077.1| hypothetical protein CLOHIR_01279 [Clostridium hiranonis DSM 13275]
Length = 243
Score = 225 bits (573), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 103/230 (44%), Positives = 149/230 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA +R LPR AGH+ G+E ++V A +GI+ LT++AFS NW+R
Sbjct: 14 PTHIAIIMDGNGRWAKSRFLPRTAGHKAGVETIRKVVKEADRLGIQYLTLYAFSTENWKR 73
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L+ ++L+ L KNN+K+ +G+ L + + L A D+T+ NTG+
Sbjct: 74 PKLEVDALMNLLVTYLRNEIDELHKNNVKLTAVGDFEKLPEACVKELHSAMDKTKDNTGV 133
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L +A NY R++I A+ I ++ + G + D+ I K+L T ++PDPDL+IRT G
Sbjct: 134 HLNLALNYGGRNDIREAVVEIAKEYKEGKISLEDITEERIKKHLSTGEIPDPDLVIRTSG 193
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E+RLS+FLLW +AYSEF + +WPDF E A+ Y RDRRFGG+
Sbjct: 194 EQRLSNFLLWDIAYSEFYYTDIHWPDFDGEALEKAIYAYQKRDRRFGGVK 243
>gi|16078716|ref|NP_389535.1| undecaprenyl pyrophosphate synthase [Bacillus subtilis subsp.
subtilis str. 168]
gi|221309531|ref|ZP_03591378.1| undecaprenyl pyrophosphate synthetase [Bacillus subtilis subsp.
subtilis str. 168]
gi|221313855|ref|ZP_03595660.1| undecaprenyl pyrophosphate synthetase [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221318778|ref|ZP_03600072.1| undecaprenyl pyrophosphate synthetase [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221323050|ref|ZP_03604344.1| undecaprenyl pyrophosphate synthetase [Bacillus subtilis subsp.
subtilis str. SMY]
gi|321315420|ref|YP_004207707.1| undecaprenyl pyrophosphate synthase [Bacillus subtilis BSn5]
gi|3183468|sp|O31751|UPPS_BACSU RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|2634025|emb|CAB13526.1| undecaprenyl pyrophosphate synthase [Bacillus subtilis subsp.
subtilis str. 168]
gi|291484208|dbj|BAI85283.1| undecaprenyl pyrophosphate synthetase [Bacillus subtilis subsp.
natto BEST195]
gi|320021694|gb|ADV96680.1| undecaprenyl pyrophosphate synthase [Bacillus subtilis BSn5]
Length = 260
Score = 225 bits (573), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 146/229 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R LPR AGH +G++V A E+G+K LT++AFS NW+R
Sbjct: 32 PEHIAIIMDGNGRWAKKRSLPRIAGHHEGMKVVKRTTKLANELGVKVLTLYAFSTENWKR 91
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL + FL L + N++VR+IG+ +L L +++A T N G+
Sbjct: 92 PKMEVDFLMKLPEEFLNTYLPELVEENVQVRIIGDETALPAHTLRAIEKAVQDTAQNDGM 151
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY R EI A K++ + ++ GS+ D+D SL + YL T + DP+L+IRT G
Sbjct: 152 ILNFALNYGGRTEIVSAAKSLAEKVKEGSLNIEDIDESLFSTYLMTESLQDPELLIRTSG 211
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+F+LWQVAYSEFVF WPDF + F AL ++ R RRFGG+
Sbjct: 212 EIRLSNFMLWQVAYSEFVFTDVLWPDFKEDHFLQALGEFQQRGRRFGGI 260
>gi|15614986|ref|NP_243289.1| undecaprenyl pyrophosphate synthetase [Bacillus halodurans C-125]
gi|13633989|sp|Q9KA67|UPPS_BACHD RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|10175043|dbj|BAB06142.1| undecaprenyl pyrophosphate synthetase [Bacillus halodurans C-125]
Length = 256
Score = 225 bits (573), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 105/236 (44%), Positives = 161/236 (68%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S+ S+ P H+ IIMDGNGRWA +GLPR AGHR+G++V N+IV A ++ I+ L+++AF
Sbjct: 21 SLDESAIPKHVAIIMDGNGRWAKKKGLPRIAGHREGMKVINKIVRKAIDLKIEVLSLYAF 80
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP +E+ L+KL + FLK +L + N++VR++G +L + + +A ++
Sbjct: 81 STENWKRPRTEVDYLLKLPERFLKLELPNLMEENVQVRIMGGLDTLPEHTAKAVTKAMEE 140
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NTGL L A NY SR E+ A+K + +++E+G++ S + +I+++L T+D+ DPD
Sbjct: 141 TKDNTGLILNFALNYGSRYEMVEAMKQVAKEVETGTLSSDAITEDVISRHLMTADLRDPD 200
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
L+IRT GE RLS+F+LWQ+AYSEF F WPDF+ A+ Y R RR+GG+
Sbjct: 201 LLIRTSGEIRLSNFMLWQLAYSEFWFTDVLWPDFTEHHLTEAIAVYQKRARRYGGV 256
>gi|313893425|ref|ZP_07826997.1| di-trans,poly-cis-decaprenylcistransferase [Veillonella sp. oral
taxon 158 str. F0412]
gi|313442066|gb|EFR60486.1| di-trans,poly-cis-decaprenylcistransferase [Veillonella sp. oral
taxon 158 str. F0412]
Length = 254
Score = 225 bits (573), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 101/233 (43%), Positives = 155/233 (66%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S++ P H+ IIMDGNGRWA RG+PR GHR G +V +IV AA ++GI+ LT++ FS
Sbjct: 18 SNAIPKHVAIIMDGNGRWAKRRGMPRSMGHRAGADVLKQIVIAADDIGIRALTVYGFSTE 77
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW+RP E+S L+ LIK +L + ++N+++R IG +L +++ ++++AE T+
Sbjct: 78 NWKRPEQEVSLLMALIKEYLNNNVKYMHEHNVRIRFIGYIGALSEELQQIIRDAELLTQN 137
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTGL L +A NY RDEI R I++I +++G++ + D+ ++ L T + D DL+I
Sbjct: 138 NTGLTLQLAINYGGRDEIVRTIRDITSSVKAGTITTDDITEDYVSSQLFTKEFSDVDLLI 197
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
R + R+S+FLLWQ+AY+EF F +WPDF++E A+ Y R+RRFGGL
Sbjct: 198 RPSSDFRISNFLLWQLAYAEFWFTDLHWPDFTKETLLEAVAAYQKRERRFGGL 250
>gi|15895067|ref|NP_348416.1| undecaprenyl pyrophosphate synthase [Clostridium acetobutylicum
ATCC 824]
gi|42559867|sp|Q97I62|UPPS_CLOAB RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|15024763|gb|AAK79756.1|AE007688_5 Undecaprenyl pyrophosphate synthase [Clostridium acetobutylicum
ATCC 824]
gi|325509205|gb|ADZ20841.1| Undecaprenyl pyrophosphate synthase [Clostridium acetobutylicum EA
2018]
Length = 257
Score = 225 bits (573), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 112/235 (47%), Positives = 147/235 (62%), Gaps = 3/235 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S+ P HI IIMDGNGRWA R LPR GH+ G E IV +++G+K LT++ FS N
Sbjct: 22 SNIPKHIAIIMDGNGRWAKKRNLPRTMGHKAGGEALKRIVRECSDIGVKYLTVYGFSTEN 81
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP E++ +++LI FLK+ F L KNN+ + IGN L L + + L +A+++T+ N
Sbjct: 82 WIRPKEEVNAIMRLIVEFLKREFNELNKNNVIINPIGNILGLPEACITALNDAKNKTKNN 141
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV---DSSLIAKYLDTSDVPDPDL 184
TGL L +A NY RDEI A+KNIF E + ++ + YL T +PDPD+
Sbjct: 142 TGLMLNLALNYGGRDEILNAVKNIFASYEENKISKDEIFNLSDEEFSSYLYTGCIPDPDI 201
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IIR GEKRLS+FLLWQ AYSEF + WPDFS E A+ Y RDRRFGG+
Sbjct: 202 IIRPSGEKRLSNFLLWQCAYSEFWYSNINWPDFSIEDLHTAIKDYQNRDRRFGGV 256
>gi|307243331|ref|ZP_07525495.1| di-trans,poly-cis-decaprenylcistransferase [Peptostreptococcus
stomatis DSM 17678]
gi|306493278|gb|EFM65267.1| di-trans,poly-cis-decaprenylcistransferase [Peptostreptococcus
stomatis DSM 17678]
Length = 243
Score = 225 bits (573), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 102/229 (44%), Positives = 150/229 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA +R +PR GH+ G+E ++V + +G+K LT++AFS NW+R
Sbjct: 14 PAHIAIIMDGNGRWAKSRFMPRTYGHKVGVETIRKVVKECSRLGVKYLTLYAFSTENWKR 73
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L+ +L+ L KNN+K+ IG+ L + L A+++T+ NTGL
Sbjct: 74 PKEEVSALMGLLVKYLRNELEELHKNNVKILTIGDISKLPQACIEELDHAKEKTKDNTGL 133
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ +A NY R+++ A+KNI Q++ G + D+ LI+ +L T + PDPDL++RT G
Sbjct: 134 VMSLALNYGGRNDLVNAVKNISQEVVDGKISVDDIGDDLISSHLSTKESPDPDLVVRTSG 193
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+RLS+FLLW++AYSEF F +WPDF + A+ Y RDRRFGG+
Sbjct: 194 EQRLSNFLLWELAYSEFYFADIHWPDFDEKELQKAIFAYQSRDRRFGGI 242
>gi|322806697|emb|CBZ04266.1| undecaprenyl pyrophosphate synthetase [Clostridium botulinum H04402
065]
Length = 252
Score = 224 bits (572), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 108/230 (46%), Positives = 146/230 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR GH+ G+E EIV +G+K LT++AFS NW+R
Sbjct: 23 PKHIAIIMDGNGRWAKERSLPRTMGHKAGVETIREIVKECNNLGVKYLTLYAFSTENWKR 82
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L+ +L+K L +NN+ V IGN L + + L++A ++T+ NTGL
Sbjct: 83 PKDEVRALMTLLVQYLRKEVKELNENNVIVNAIGNIEKLPEVCIKELEKAYEETKDNTGL 142
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY RDEI RA+K +++DI+ G + D++ + YL T + DPDLIIR G
Sbjct: 143 VLNLALNYGGRDEIIRAVKYMYEDIKVGKIKEEDINEENLPDYLYTKGMLDPDLIIRPSG 202
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
EKR+S+FLLWQ AYSEF + WPDF +E A+ Y RDRRFG +
Sbjct: 203 EKRISNFLLWQCAYSEFWYSDIKWPDFKKEHLHKAIYDYQNRDRRFGTVK 252
>gi|254511763|ref|ZP_05123830.1| undecaprenyl pyrophosphate synthetase 1 [Rhodobacteraceae bacterium
KLH11]
gi|221535474|gb|EEE38462.1| undecaprenyl pyrophosphate synthetase 1 [Rhodobacteraceae bacterium
KLH11]
Length = 243
Score = 224 bits (572), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 106/232 (45%), Positives = 145/232 (62%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
++ P H+ IIMDGNGRWA ARG PR GH G E+V A +GIK LTIFAFS N
Sbjct: 10 TAGPRHVAIIMDGNGRWAQARGRPRLFGHHAGARRVREVVEACPRLGIKYLTIFAFSTEN 69
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W+R E++ L+ L + ++ K +LK+N I+VR IG+R+ LD + ++ E +T N
Sbjct: 70 WKRTQVEVAGLMSLFRRYITKETKTLKENGIRVRFIGDRVRLDAKLTELMDTLEHETEQN 129
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
++L +A NY RDE++RA K + +D+ G + DVD + KYLDT +PDPDL+IR
Sbjct: 130 DLVHLTVALNYGGRDEVARATKRLARDVAKGVLRPEDVDEETLPKYLDTRVLPDPDLVIR 189
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
T GE R+S+FLLWQ AYSE+ F WPDF+ Y R+RRFG +
Sbjct: 190 TSGEARISNFLLWQSAYSEYEFSDTLWPDFTAAELERLCRSYGARERRFGAV 241
>gi|21673106|ref|NP_661171.1| undecaprenyl diphosphate synthase [Chlorobium tepidum TLS]
gi|42559830|sp|Q8KFQ5|UPPS_CHLTE RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|21646179|gb|AAM71513.1| undecaprenyl diphosphate synthase [Chlorobium tepidum TLS]
Length = 265
Score = 224 bits (572), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 105/232 (45%), Positives = 155/232 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA +G R AGH G+E ++V A++++GI+NLT+F FSI NW+R
Sbjct: 27 PRHIGIIMDGNGRWAKIKGKSRIAGHVAGVESVRDVVEASSQLGIENLTLFTFSIENWKR 86
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EIS L+KL+ L+K L +N+I++ VIG+ + DD+ L E + TR N G+
Sbjct: 87 PKPEISALMKLLIKVLRKEAVKLLENDIRLEVIGDMEMIPDDVRKTLDETIELTRKNRGM 146
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ IA +YS + +I++A ++I ++ G + +D +L A YL T+ +PDPDL+IRT G
Sbjct: 147 AMTIALSYSGKWDITQACRHIALQVKQGLLDPETIDENLFASYLSTASMPDPDLLIRTSG 206
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+F+LWQ AYSE +F WPDF R + A+ ++ R+RRFG S++
Sbjct: 207 EYRISNFMLWQNAYSEIIFSNTLWPDFRRNELYEAIREFQKRERRFGKTSEQ 258
>gi|254448786|ref|ZP_05062243.1| di-trans,poly-cis-decaprenylcistransferase [gamma proteobacterium
HTCC5015]
gi|198261627|gb|EDY85915.1| di-trans,poly-cis-decaprenylcistransferase [gamma proteobacterium
HTCC5015]
Length = 248
Score = 224 bits (572), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 103/242 (42%), Positives = 157/242 (64%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M S + + P HI IIMDGNGRWA RGLPR AGH+ G++ ++ A I++LT+
Sbjct: 1 MSESEATDNKPQHIAIIMDGNGRWAKRRGLPRTAGHKAGVKAARAVIEACEPHRIQHLTL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW+RP E+S L+++ S L K SLK+ N+++R IG++ + D+ + + A
Sbjct: 61 FAFSSENWKRPEDEVSSLMQIFVSTLSKELKSLKERNVRLRFIGDKSAFDEKLRDHMASA 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E QT NTGL L IA NY R ++++A + + +++G + + +A++L S++P
Sbjct: 121 ETQTADNTGLQLNIAVNYGGRWDMTQAAYALAKKVQNGIIEPRHITEQTVAQHLSLSELP 180
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRTGGE R+S+FLLWQ+AY+E F P++WPDF + A+ + R+RRFG S
Sbjct: 181 DPDLMIRTGGEHRISNFLLWQLAYAEIYFSPDWWPDFGAQQINDAVAWFGARERRFGQTS 240
Query: 241 KK 242
++
Sbjct: 241 EQ 242
>gi|302392359|ref|YP_003828179.1| undecaprenyl pyrophosphate synthetase [Acetohalobium arabaticum DSM
5501]
gi|302204436|gb|ADL13114.1| Undecaprenyl pyrophosphate synthetase [Acetohalobium arabaticum DSM
5501]
Length = 241
Score = 224 bits (571), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 103/238 (43%), Positives = 152/238 (63%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M + P+HI +IMDGNGRWA +GL R AGH+KG++ +I+ ++ I++LT+FAFS
Sbjct: 1 METEEMPEHIAVIMDGNGRWAKEQGLSRSAGHKKGVQKLKKIIEIVNKLEIEHLTVFAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+ L++L L +++++RV+G R L ++I + E D T
Sbjct: 61 TENWKRPKKEVDFLMRLFHRTFDNEVLDLHNSDVRIRVLGRRQGLPENIKAKIDEVVDLT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N GLNL IA NY R EI A K++ +++G+V D+D ++ L T+D+PDP+L
Sbjct: 121 NKNQGLNLNIALNYGGRSEIIDAAKSLAAKVKNGTVKLDDIDEEELSNELYTADIPDPEL 180
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IR GEKR+S+FLLWQ AY+EF F YWP+F +E A+ +Y R+RRFGGL +K
Sbjct: 181 LIRPSGEKRISNFLLWQSAYAEFWFTDTYWPEFDKEELLEAIAEYQRRERRFGGLKEK 238
>gi|256847042|ref|ZP_05552488.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus
coleohominis 101-4-CHN]
gi|256715706|gb|EEU30681.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus
coleohominis 101-4-CHN]
Length = 255
Score = 224 bits (571), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 107/235 (45%), Positives = 154/235 (65%), Gaps = 3/235 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA AR LPR AGH++G+E ++ AA+++G+K L+++AFS NW+R
Sbjct: 21 PHHIAIIMDGNGRWAQARHLPRVAGHQQGMETVKKVTIAASKLGVKVLSLYAFSTENWKR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE+S L+ L F K L ++N++V V+G+ L + ++ A T TG+
Sbjct: 81 PQSEVSFLMNLPIKFFTKFVPDLVEHNVRVTVMGDITKLPEKTRIAVRNAIHDTEQCTGM 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP---DPDLIIR 187
L A NY RDEI RA ++ +D++ G + S D+ +++YL T+ + DP+L+IR
Sbjct: 141 VLNFALNYGGRDEIVRATTDMVKDVQDGKLSSMDITEKTMSQYLMTAPLTPYEDPELLIR 200
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
T GE+RLS+F+LWQVAYSEFVF+ E+WPDF E A++ + R RRFGGL K
Sbjct: 201 TSGEQRLSNFMLWQVAYSEFVFMDEHWPDFDGESLKKAISIFQHRHRRFGGLKNK 255
>gi|193213406|ref|YP_001999359.1| undecaprenyl diphosphate synthase [Chlorobaculum parvum NCIB 8327]
gi|193086883|gb|ACF12159.1| undecaprenyl diphosphate synthase [Chlorobaculum parvum NCIB 8327]
Length = 268
Score = 224 bits (571), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 107/232 (46%), Positives = 151/232 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA +G R GH G++ +IV A +++GI LT+F FSI NWRR
Sbjct: 27 PRHIGIIMDGNGRWAKQKGKSRIEGHIAGVDSVQDIVEACSQLGISALTLFTFSIENWRR 86
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EIS L+KL+ LKK L +NNI++ VIG+ + + L+E +QTR N L
Sbjct: 87 PKPEISALMKLLIKVLKKETPQLCENNIRLEVIGDLNLVSSTVRKTLEETIEQTRNNHEL 146
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA +YS + +I+ A + I + + +G++ +D +L A L T+ +PDP+L+IRT G
Sbjct: 147 TLTIALSYSGKWDITNACRTIAEQVANGTIAPEQIDENLFAANLSTASLPDPELLIRTSG 206
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+F+LWQ+AYSE F YWPDF R+ + AL +Y R+RRFG S++
Sbjct: 207 EFRISNFMLWQIAYSEIFFTETYWPDFRRDKLYDALREYQNRERRFGQTSEQ 258
>gi|300854492|ref|YP_003779476.1| undecaprenyl pyrophosphate synthetase [Clostridium ljungdahlii DSM
13528]
gi|300434607|gb|ADK14374.1| undecaprenyl pyrophosphate synthetase [Clostridium ljungdahlii DSM
13528]
Length = 255
Score = 224 bits (571), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 147/229 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR GHR +E +IV +++ + LT++AFS NW+R
Sbjct: 26 PKHIAIIMDGNGRWAKERNLPRTMGHRAAVEAIRDIVKECSKLNVNYLTLYAFSTENWKR 85
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L+ +LKK L KNN+ + IG+ L L + ++T+ NTGL
Sbjct: 86 PKDEVSALMRLLVEYLKKELNELDKNNVIINCIGDISKLPLACQEQLIISCEKTKTNTGL 145
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY R EI RA K +++DI+S + D++ ++KYL T +PDPD+IIR G
Sbjct: 146 TLNLALNYGGRYEIVRAFKLMYEDIKSKKINEEDINEETVSKYLYTKGMPDPDIIIRPSG 205
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+RLS+FLLWQ AYSEF + WPDF +E + A++ Y RDRRFGGL
Sbjct: 206 EQRLSNFLLWQCAYSEFWYSDIKWPDFKKEHLYKAISDYQNRDRRFGGL 254
>gi|83311593|ref|YP_421857.1| undecaprenyl pyrophosphate synthase [Magnetospirillum magneticum
AMB-1]
gi|82946434|dbj|BAE51298.1| Undecaprenyl pyrophosphate synthase [Magnetospirillum magneticum
AMB-1]
Length = 243
Score = 224 bits (571), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 108/237 (45%), Positives = 155/237 (65%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M++ PP H+ IIMDGNGRWA ARGLPR AGH++G E V AA E+G+ LT+
Sbjct: 4 MLSPADQPPPPVHVAIIMDGNGRWAKARGLPRTAGHKRGAEAVRRTVEAAREMGVSYLTL 63
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E+++L+ L++ +L+ +L KN I+++VIG+R L DI+ +++E+
Sbjct: 64 YAFSSENWKRPAGEVTDLMGLLRLYLRNEVNNLHKNGIRLKVIGDRSRLGADIVRLIEES 123
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E +T NT L L +A +Y R EI A + + +D+ +G + VD I L T+ +P
Sbjct: 124 EAKTAGNTALTLLLALSYGGRQEIVEAARALARDVAAGRLSPDAVDEDAIDARLSTAGIP 183
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DPD+IIRT GE+R+S+FLLWQ AY+E VF+ WPDF R A+ + RDRRFG
Sbjct: 184 DPDMIIRTSGEQRISNFLLWQGAYAELVFMDTLWPDFGRPELEAAIRDFQGRDRRFG 240
>gi|254460539|ref|ZP_05073955.1| undecaprenyl pyrophosphate synthetase 1 [Rhodobacterales bacterium
HTCC2083]
gi|206677128|gb|EDZ41615.1| undecaprenyl pyrophosphate synthetase 1 [Rhodobacteraceae bacterium
HTCC2083]
Length = 254
Score = 224 bits (571), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 108/231 (46%), Positives = 145/231 (62%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P H+ IIMDGNGRWA R PR GH G +IV A G+ LTIFAFS NW
Sbjct: 22 SGPRHVAIIMDGNGRWAQMRNRPRLFGHHAGARRVRQIVEACPPNGVNYLTIFAFSTENW 81
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+R E+S L+KL + ++ K +L ++VR IG+R+ L+D ++ ++ E T N
Sbjct: 82 KRTQVEVSGLMKLFQRYITKEARTLADAGVRVRFIGDRVRLNDKLVELMDSLESMTEKND 141
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
++L IA NY RDE++RA K + QD+ SG + VD + KYLDT +PDPDL+IRT
Sbjct: 142 KVHLTIALNYGGRDEVARATKRLAQDVASGKLDPEIVDEETLPKYLDTYVLPDPDLVIRT 201
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE R+S+FLLWQ AYSE+ F+ WPDF+ E F ++Y RDRRFGG+
Sbjct: 202 SGEARISNFLLWQSAYSEYEFVETLWPDFTAEEFGALTSKYGNRDRRFGGV 252
>gi|294500907|ref|YP_003564607.1| undecaprenyl pyrophosphate synthetase [Bacillus megaterium QM
B1551]
gi|294350844|gb|ADE71173.1| undecaprenyl pyrophosphate synthetase [Bacillus megaterium QM
B1551]
Length = 260
Score = 224 bits (571), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 103/229 (44%), Positives = 147/229 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R LPR GH +G++V + A E+G+K LT++AFS NW+R
Sbjct: 32 PEHIAIIMDGNGRWAQKRALPRMMGHHEGMKVVRHVTRLANELGVKVLTLYAFSTENWKR 91
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L+KL + FL L + N++VR++G++ L + + A ++T+ NTGL
Sbjct: 92 PKTEVEFLMKLPEEFLTTFLPELIEKNVQVRIMGDKSELPAHTIRAVDNAIEKTKHNTGL 151
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY SR EI AI+++ +D+E G V S + +L + YL + +PDPDL+IRT G
Sbjct: 152 ILNFALNYGSRHEIMGAIQSLVEDVEQGKVASSSISENLFSSYLMSKSLPDPDLLIRTSG 211
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+F+LWQ+AY+EF F WPDF A+ + R RRFGG+
Sbjct: 212 ELRLSNFMLWQLAYTEFWFTEVLWPDFKENHLIEAVEAFQKRGRRFGGV 260
>gi|223044250|ref|ZP_03614287.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus capitis
SK14]
gi|222442400|gb|EEE48508.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus capitis
SK14]
Length = 256
Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/232 (44%), Positives = 150/232 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA R +PR GH +G++ +I A+ +GIK LT++AFS NW R
Sbjct: 25 PEHVAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITREASNIGIKYLTLYAFSTENWSR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE++ ++ L +FLK L + N+KV IG L + + +A+++T+ NTGL
Sbjct: 85 PESEVNYIMNLPVNFLKTFLPELIEKNVKVETIGFGEGLPQSTIEAINQAKEKTKNNTGL 144
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY R EI +++K IF++++S S +D +L+ K+L T D PDP+L+IRT G
Sbjct: 145 TLIFAINYGGRAEIIQSMKEIFEELQSAHQSSEAIDENLLNKHLMTRDYPDPELLIRTSG 204
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FL+WQ +YSEF+F + WPDF L Y R RRFGGLS++
Sbjct: 205 EQRISNFLIWQASYSEFIFNEKLWPDFDENELKECLKIYQSRQRRFGGLSEE 256
>gi|171778816|ref|ZP_02919878.1| hypothetical protein STRINF_00737 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171282462|gb|EDT47886.1| hypothetical protein STRINF_00737 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 251
Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 108/233 (46%), Positives = 145/233 (62%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HIGIIMDGNGRWA R PR GH+ G++ E+ A++E+G+K LT++AFS NW R
Sbjct: 19 PNHIGIIMDGNGRWAKKRMQPRVMGHKAGMDALQEVTIASSELGVKVLTVYAFSTENWSR 78
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ ++ L F K L NN+KV+VIG L +K A +QT+ N+GL
Sbjct: 79 PEDEVKFIMNLPVEFFDKYVPELDTNNVKVQVIGETNRLPKATFDTMKRACEQTKHNSGL 138
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI+ A+KNI Q++ + D+ +I+ +L T+ +P DPDLII
Sbjct: 139 ILNFALNYGGRSEITEAVKNIAQEVLEAKISPDDITEDVISNHLMTNHLPYLYRDPDLII 198
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSEF F P WPDF ++ A+ +YN R RRFGG+
Sbjct: 199 RTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKDELIKAIAEYNQRHRRFGGI 251
>gi|256851265|ref|ZP_05556654.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus jensenii
27-2-CHN]
gi|260660689|ref|ZP_05861604.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus jensenii
115-3-CHN]
gi|282934733|ref|ZP_06339976.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus jensenii
208-1]
gi|297206132|ref|ZP_06923527.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus jensenii
JV-V16]
gi|256616327|gb|EEU21515.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus jensenii
27-2-CHN]
gi|260548411|gb|EEX24386.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus jensenii
115-3-CHN]
gi|281301308|gb|EFA93609.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus jensenii
208-1]
gi|297149258|gb|EFH29556.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus jensenii
JV-V16]
Length = 237
Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 109/237 (45%), Positives = 154/237 (64%), Gaps = 2/237 (0%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M +H+ IIMDGNGRWA R LPR GH++G++ +I AA E+G+K LT++AFS
Sbjct: 1 MTKEKELNHLAIIMDGNGRWAQKRHLPRVMGHKQGMQNIEKIALAANEMGVKVLTLYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP E+S L+KL +F K L +NN+KV ++G L D L V ++A + T
Sbjct: 61 TENWGRPTDEVSYLMKLPITFFDKFMPKLMENNVKVNIMGFLNELPDKTLAVTQKAMEDT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV--PDP 182
+ NTG+ L AFNY SR EI+ AIK I + +++ S+ D++ L+ + L T+++ PDP
Sbjct: 121 KNNTGMILNFAFNYGSRREITTAIKKIAKQVKNESITLEDINDKLVNQELLTANLPYPDP 180
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DLI+RT GE+R+S+FLLWQ+AYSE F +YWPDF+ E + + RDRRFG L
Sbjct: 181 DLILRTSGEQRISNFLLWQLAYSELAFTDKYWPDFNEEDLKKVIMDFQGRDRRFGKL 237
>gi|331001981|ref|ZP_08325501.1| di-trans,poly-cis-decaprenylcistransferase [Lachnospiraceae oral
taxon 107 str. F0167]
gi|330411777|gb|EGG91182.1| di-trans,poly-cis-decaprenylcistransferase [Lachnospiraceae oral
taxon 107 str. F0167]
Length = 235
Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 105/228 (46%), Positives = 141/228 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P I II+DGNGRWA R LPR GH+ G E + V +G++ LT++AFS NW+R
Sbjct: 7 PKSIAIILDGNGRWAQKRNLPRAMGHKAGCEALEKTVEDCVRLGVECLTVYAFSTENWKR 66
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+KL++ ++ K KNN+K +IG+ + DI +K+ D T NTG+
Sbjct: 67 SSVEVGALMKLLRFYMVKLIDVANKNNVKAVMIGDESRFEPDIRKGIKKLVDATSKNTGM 126
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
A NY RDEI RAI NI D SG++ D++ LI+ YLDT ++PDPDL+IRT G
Sbjct: 127 TFAFAINYGGRDEIRRAINNIVDDTVSGAISKDDINEELISSYLDTKNLPDPDLLIRTSG 186
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E R+S+FLLWQ+AYSEF WPDF +E A+ Y+ R RRFGG
Sbjct: 187 ELRVSNFLLWQIAYSEFYITDTLWPDFDKEELLKAVESYSQRQRRFGG 234
>gi|315651640|ref|ZP_07904651.1| di-trans,poly-cis-decaprenylcistransferase [Eubacterium saburreum
DSM 3986]
gi|315486094|gb|EFU76465.1| di-trans,poly-cis-decaprenylcistransferase [Eubacterium saburreum
DSM 3986]
Length = 235
Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 102/228 (44%), Positives = 144/228 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P I II+DGNGRWA R LPR GH+ G E + V +G++ LT++AFS NW+R
Sbjct: 7 PKSIAIILDGNGRWAKKRNLPRAMGHKAGCETLEKTVEDCVRLGVECLTVYAFSTENWKR 66
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+KL++ ++ K +NN+K +IG+ + DI +++ + T+ NTG+
Sbjct: 67 SAIEVGALMKLLRFYMVKLIDVANRNNVKAVMIGDESRFEPDIRNGIRKLTEATKNNTGM 126
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
A NY RDEI RA++NI D+ESG + ++ LI+ YLDT+D+PDPDL+IRT G
Sbjct: 127 VFAFAINYGGRDEIKRAVENIVDDVESGKLSKENISEELISSYLDTNDLPDPDLLIRTSG 186
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E R+S+FLLWQ+AYSEF WPDF +E A+ Y+ R RRFGG
Sbjct: 187 ELRVSNFLLWQIAYSEFYITDTLWPDFDKEELLKAIESYSHRQRRFGG 234
>gi|160940989|ref|ZP_02088328.1| hypothetical protein CLOBOL_05883 [Clostridium bolteae ATCC
BAA-613]
gi|158436079|gb|EDP13846.1| hypothetical protein CLOBOL_05883 [Clostridium bolteae ATCC
BAA-613]
Length = 252
Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/229 (44%), Positives = 146/229 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ +I+DGNGRWA RGLPR GH++G + V AA +GI+ LT++ FS NW+R
Sbjct: 23 PEHVALILDGNGRWAKKRGLPRTLGHKEGCVTVEKTVEIAARMGIRYLTVYGFSTENWKR 82
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L++L + ++ + NN++V++IG+R D DI+ + E +T+ NTGL
Sbjct: 83 SAEEVGALMQLFRYYMVRLLKIASANNVRVKMIGDRSRFDRDIIDGINRLESETQDNTGL 142
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
IA NY RDEI RA + +D G VD +L A YLDT+ +PDPDL+IRT G
Sbjct: 143 TFVIAVNYGGRDEIRRAAAGLARDCALGKADPDQVDEALFASYLDTAGMPDPDLLIRTSG 202
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS++LLWQ+AY+E V WPDF++E A+ QYN R+RRFG +
Sbjct: 203 ELRLSNYLLWQLAYTEIVVTDCLWPDFNQEELEKAIVQYNKRERRFGAV 251
>gi|225018405|ref|ZP_03707597.1| hypothetical protein CLOSTMETH_02352 [Clostridium methylpentosum
DSM 5476]
gi|224948823|gb|EEG30032.1| hypothetical protein CLOSTMETH_02352 [Clostridium methylpentosum
DSM 5476]
Length = 234
Score = 223 bits (569), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 107/235 (45%), Positives = 160/235 (68%), Gaps = 2/235 (0%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M ++ P HIG+IMDGNGRWA RGLPR AGH G + F +IV A + GI LT++AFS
Sbjct: 1 MENNLPKHIGLIMDGNGRWAKKRGLPRKAGHTVGAQTFRKIVRACNKKGIGYLTVYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP EI ++KL++ +LK+ LK+N I+ R IG+ D +I ++ EAE+ ++
Sbjct: 61 ENWKRPQEEIDAIIKLLRDYLKEAHKYLKEN-IRTRFIGDLSVFDQEIRDLIVEAEEASK 119
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
TGLNL IA NY R+EI+ A+K I + ++ G++ + ++ ++A +L T+ +P+ DLI
Sbjct: 120 DMTGLNLNIAINYGGRNEITHAVKTIVEQVQQGTLRADEIGEQIVADHLYTAGMPEVDLI 179
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPE-YWPDFSRELFFHALNQYNLRDRRFGGL 239
IR GE RLS+FL+WQ AY+E++F+ + WPDFS + AL ++ R+RRFGG+
Sbjct: 180 IRPSGEYRLSNFLIWQSAYAEYIFMDDILWPDFSEKHLNAALEEFARRNRRFGGI 234
>gi|238854748|ref|ZP_04645078.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus jensenii
269-3]
gi|260663980|ref|ZP_05864833.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus jensenii
SJ-7A-US]
gi|282932861|ref|ZP_06338258.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus jensenii
208-1]
gi|238832538|gb|EEQ24845.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus jensenii
269-3]
gi|260561866|gb|EEX27835.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus jensenii
SJ-7A-US]
gi|281302896|gb|EFA95101.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus jensenii
208-1]
Length = 237
Score = 223 bits (569), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 109/237 (45%), Positives = 154/237 (64%), Gaps = 2/237 (0%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M +H+ IIMDGNGRWA R LPR GH++G++ +I AA ++G+K LT++AFS
Sbjct: 1 MTKEKELNHLAIIMDGNGRWAQKRHLPRVMGHKQGMQNIEKIALAANKMGVKVLTLYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP E+S L+KL +F K L +NN+KV ++G L + L V K+A T
Sbjct: 61 TENWGRPTDEVSYLMKLPITFFDKFMPKLMENNVKVNIMGFLDELPEKTLAVTKKAMADT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV--PDP 182
+ NTG+ L AFNY SR EI+ AIK I + +++ S+ D++ L+ + L T+D+ PDP
Sbjct: 121 KNNTGMILNFAFNYGSRREITSAIKKIAEKVKNESINLEDINDELVNQELLTADLPYPDP 180
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DLI+RT GE+R+S+FLLWQ+AYSE F +YWPDF+ E + + +RDRRFG L
Sbjct: 181 DLILRTSGEQRISNFLLWQLAYSELAFTDKYWPDFNEEDLKKVIMDFQMRDRRFGKL 237
>gi|295706253|ref|YP_003599328.1| undecaprenyl pyrophosphate synthetase [Bacillus megaterium DSM 319]
gi|294803912|gb|ADF40978.1| undecaprenyl pyrophosphate synthetase [Bacillus megaterium DSM 319]
Length = 260
Score = 223 bits (569), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/229 (44%), Positives = 147/229 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R LPR GH +G++V + +A E+G+K LT++AFS NW+R
Sbjct: 32 PEHIAIIMDGNGRWAQKRALPRMMGHHEGMKVVRHVTRSANELGVKVLTLYAFSTENWKR 91
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL + FL L + N++VR++G++ L + + A ++T+ NTGL
Sbjct: 92 PKIEVEFLMKLPEEFLTTFLPELIEKNVQVRIMGDKSELPAHTIRAVDNAIEKTKHNTGL 151
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY SR EI AI+++ +D+E G V S + +L + YL + +PDPDL+IRT G
Sbjct: 152 ILNFALNYGSRHEIMGAIQSLVEDVEQGKVASSSISENLFSSYLMSKSLPDPDLLIRTSG 211
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+F+LWQ+AY+EF F WPDF A+ + R RRFGG+
Sbjct: 212 ELRLSNFMLWQLAYTEFWFTEVLWPDFKENHLIEAVEAFQKRGRRFGGV 260
>gi|229544426|ref|ZP_04433484.1| undecaprenyl diphosphate synthase [Bacillus coagulans 36D1]
gi|229324911|gb|EEN90588.1| undecaprenyl diphosphate synthase [Bacillus coagulans 36D1]
Length = 264
Score = 223 bits (569), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 105/233 (45%), Positives = 151/233 (64%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+++ P+H+ IIMDGNGRWA R LPR AGH +G++ +I A +GIK LT++AFS
Sbjct: 25 AAAIPEHVAIIMDGNGRWAKKRHLPRVAGHHEGMKTVRKITRIANRLGIKVLTLYAFSTE 84
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW+RP E+ L+KL + FL LK N+KV+++G + + + +A +T
Sbjct: 85 NWKRPKLEVEYLMKLPEEFLSTYLPELKAENVKVQMMGCKEKIPLHTQRAINKAISETAQ 144
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N GL L A NY SRDEI RA++NI D+++G + +++ + +YL T + DPDL+I
Sbjct: 145 NDGLILNFALNYGSRDEIMRAVRNILMDVKNGIMNENELTEEVFHQYLMTHGLQDPDLLI 204
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+F+LWQ+AY+EFVF WPDF+ E F A+ +Y R RR+GGL
Sbjct: 205 RTSGEIRLSNFMLWQLAYTEFVFTDVLWPDFNEEHFLSAIEEYQKRSRRYGGL 257
>gi|15675763|ref|NP_269937.1| undecaprenyl pyrophosphate synthase [Streptococcus pyogenes M1 GAS]
gi|71904326|ref|YP_281129.1| undecaprenyl pyrophosphate synthase [Streptococcus pyogenes
MGAS6180]
gi|71911489|ref|YP_283039.1| undecaprenyl pyrophosphate synthase [Streptococcus pyogenes
MGAS5005]
gi|94995166|ref|YP_603264.1| undecaprenyl pyrophosphate synthase [Streptococcus pyogenes
MGAS10750]
gi|209560103|ref|YP_002286575.1| undecaprenyl pyrophosphate synthase [Streptococcus pyogenes NZ131]
gi|42560009|sp|Q99XY1|UPPS_STRP1 RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|13622985|gb|AAK34658.1| putative undecaprenyl pyrophosphate synthetase [Streptococcus
pyogenes M1 GAS]
gi|71803421|gb|AAX72774.1| undecaprenyl pyrophosphate synthetase [Streptococcus pyogenes
MGAS6180]
gi|71854271|gb|AAZ52294.1| undecaprenyl pyrophosphate synthetase [Streptococcus pyogenes
MGAS5005]
gi|94548674|gb|ABF38720.1| Undecaprenyl pyrophosphate synthetase [Streptococcus pyogenes
MGAS10750]
gi|209541304|gb|ACI61880.1| Undecaprenyl pyrophosphate synthetase [Streptococcus pyogenes
NZ131]
Length = 249
Score = 223 bits (569), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 112/233 (48%), Positives = 143/233 (61%), Gaps = 4/233 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P HIGIIMDGNGRWA R PR GH+ G++ E+ A+E+G+K LT++AFS NW
Sbjct: 15 SIPKHIGIIMDGNGRWAKKRLKPRVFGHKAGMDALQEVTITASELGVKVLTVYAFSTENW 74
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+S ++ L +F K L +NN+K+++IG L +D L L A D+T+ NT
Sbjct: 75 SRPQDEVSFIMNLPVTFFDKYVPVLHENNVKIQMIGETSRLPEDTLAALNAAIDKTKRNT 134
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDL 184
GL L A NY R EI+ A++ I QD+ + D+ LIA YL T +P DPDL
Sbjct: 135 GLILNFALNYGGRAEITSAVRFIAQDVLDAKLNPGDITEDLIANYLMTDHLPYLYRDPDL 194
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IIRT GE RLS+FL WQ AYSEF F P WPDF + A+ YN R RRFG
Sbjct: 195 IIRTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKAELLKAIADYNRRQRRFG 247
>gi|84516073|ref|ZP_01003433.1| undecaprenyl diphosphate synthase [Loktanella vestfoldensis SKA53]
gi|84509769|gb|EAQ06226.1| undecaprenyl diphosphate synthase [Loktanella vestfoldensis SKA53]
Length = 243
Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 100/234 (42%), Positives = 151/234 (64%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ + P H+ IIMDGNGRWA RG PR GH G E++ + E G+K LT+F FS
Sbjct: 9 TKTGPAHVAIIMDGNGRWAQQRGRPRLFGHHAGARRVREVLQSCPEHGVKYLTLFVFSTE 68
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW+R +E++ L+ + + ++++ +L N ++VR IG+R+ LDD ++ ++ E E T
Sbjct: 69 NWKRTQTEVAGLMLMFRKYIQREARALVDNGVRVRFIGDRIRLDDKLVSLMDELELLTAG 128
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N ++L IA NY RDE++RA K + +IE G + DVD+ ++++LDT +PDPDL+I
Sbjct: 129 NDLIHLTIALNYGGRDEVTRAAKRLAYEIEMGRLSHKDVDAETLSRFLDTHVLPDPDLVI 188
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RT GE R+S+FLLWQ AY+E+ F+ WPDF+ F L +Y R+RRFG +
Sbjct: 189 RTSGEARISNFLLWQSAYAEYEFVDTLWPDFTAAEFGRVLARYGQRERRFGAVQ 242
>gi|253580860|ref|ZP_04858123.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251847930|gb|EES75897.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 235
Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 105/232 (45%), Positives = 146/232 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI II+DGNGRWA A+G+PR GH KG + E+G+K +T++AFS NW+R
Sbjct: 4 PNHIAIILDGNGRWAKAKGMPRSYGHVKGCANLETVCDYMKELGVKYVTVYAFSTENWKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+KL +S+LKK KN ++VRVIG + D DI + E ++ +
Sbjct: 64 SKDEVDGLMKLFRSYLKKCIKLADKNKMRVRVIGEVSAFDQDIQESIARLEQYSQKYDEI 123
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
IA NY SRDEI R I+ + QD G V ++D + YLDT+ +PDPDL+IRT G
Sbjct: 124 YFQIALNYGSRDEIIRGIRKLAQDAADGKVKPEEIDEHVFDNYLDTAGIPDPDLMIRTSG 183
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E RLS+FLLWQ+AY+EF F WPDF++ A+ +YN RDRR+GG+ ++
Sbjct: 184 ELRLSNFLLWQMAYTEFYFTDVAWPDFNKAELIKAIEKYNQRDRRYGGVKEE 235
>gi|94989307|ref|YP_597408.1| undecaprenyl pyrophosphate synthase [Streptococcus pyogenes
MGAS9429]
gi|94993196|ref|YP_601295.1| undecaprenyl pyrophosphate synthase [Streptococcus pyogenes
MGAS2096]
gi|94542815|gb|ABF32864.1| undecaprenyl pyrophosphate synthetase [Streptococcus pyogenes
MGAS9429]
gi|94546704|gb|ABF36751.1| Undecaprenyl pyrophosphate synthetase [Streptococcus pyogenes
MGAS2096]
Length = 249
Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 112/233 (48%), Positives = 143/233 (61%), Gaps = 4/233 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P HIGIIMDGNGRWA R PR GH+ G++ E+ A+E+G+K LT++AFS NW
Sbjct: 15 SIPKHIGIIMDGNGRWAKKRLKPRVFGHKAGMDALQEVTITASELGVKVLTVYAFSTENW 74
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+S ++ L +F K L +NN+K+++IG L +D L L A D+T+ NT
Sbjct: 75 SRPQDEVSFIMNLPVTFFDKYVPVLHENNVKIQMIGETSRLPEDTLAALNAAIDKTKRNT 134
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDL 184
GL L A NY R EI+ A++ I QD+ + D+ LIA YL T +P DPDL
Sbjct: 135 GLILNFALNYGGRAEITSAVRFIAQDVLDAKLNPGDITEDLIANYLMTDHLPYLYRDPDL 194
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IIRT GE RLS+FL WQ AYSEF F P WPDF + A+ YN R RRFG
Sbjct: 195 IIRTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKAELLKAIADYNHRQRRFG 247
>gi|282877123|ref|ZP_06285965.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella buccalis
ATCC 35310]
gi|281300805|gb|EFA93132.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella buccalis
ATCC 35310]
Length = 259
Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 102/232 (43%), Positives = 150/232 (64%), Gaps = 2/232 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWAA RG R GH+ G+E I + +G+K LT++ FS NW R
Sbjct: 17 PTHVAIIMDGNGRWAAERGKERSFGHQAGVETVRRITSECVRLGVKYLTLYTFSTENWNR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L+ S L+ + KNN++ RVIG+ L +++ L+E E+ T N+ +
Sbjct: 77 PEDEVSALMGLVLSSLEDEIF--MKNNVRFRVIGDVKRLPENVRAKLQETEEHTAANSAM 134
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ +A +YS+R E++ A++NI D+++G V + DV+ L+ + L+TS +PDPDL+IRTGG
Sbjct: 135 TMVVALSYSARWEMTHALQNIVADVQAGRVHADDVNEELVGQRLETSFMPDPDLLIRTGG 194
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AYSE F YWPDF+ A+ Y R RRFG ++
Sbjct: 195 ELRVSNFLLWQIAYSELYFCDTYWPDFNEADLHRAIMDYQGRQRRFGKTERQ 246
>gi|186682351|ref|YP_001865547.1| undecaprenyl pyrophosphate synthase [Nostoc punctiforme PCC 73102]
gi|186464803|gb|ACC80604.1| undecaprenyl diphosphate synthase [Nostoc punctiforme PCC 73102]
Length = 236
Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 144/227 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA +RGLPR AGHR+G E++ + GIK LT +AFS NW+R
Sbjct: 2 PQHIAVIMDGNGRWATSRGLPRIAGHRQGASTLKELLRCCKDWGIKALTAYAFSTENWQR 61
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P+ E+ L+ L + L + + + +++ IG+ +L + ++ + +T N +
Sbjct: 62 PIEEVDFLMHLFERLLHRELAQMHQEGVRISFIGDLSALPKSLQMEMERSMTETLNNQAI 121
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ +A NY SR+EI+R + + Q +E G + + V+ SL+ ++L T+D P+PDL+IRT G
Sbjct: 122 HFTVAVNYGSRNEITRVCRQVAQLVEQGELSAEQVNESLVEQHLYTADTPEPDLLIRTSG 181
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E RLS+FLLWQ+AY+E F WPDF+RE F AL Y RDRRFG
Sbjct: 182 EMRLSNFLLWQMAYTEMYFTDILWPDFNREAFHQALLSYQSRDRRFG 228
>gi|120434582|ref|YP_860274.1| undecaprenyl-pyrophosphate synthetase [Gramella forsetii KT0803]
gi|117576732|emb|CAL65201.1| undecaprenyl-pyrophosphate synthetase [Gramella forsetii KT0803]
Length = 246
Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/232 (45%), Positives = 150/232 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA +G R +GH++G + ++V AE+G+KNLT++AFS NW R
Sbjct: 13 PKHIAIIMDGNGRWAKQKGFLRASGHKEGTKAVRDVVEGCAEIGVKNLTLYAFSTENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL+ S LKK +LK NNIK+ IGN SL L + ++T NT +
Sbjct: 73 PKLEVDTLMKLLVSSLKKEIKTLKDNNIKLNCIGNISSLPKKARQELLDVIEKTSTNTQM 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y SR+EI+ IK I ++S + +D S+I ++L T ++PD DL+IRT G
Sbjct: 133 TLTLALSYGSREEITNCIKQIATKVKSEELSEDAIDESVINEHLYTRNLPDVDLLIRTSG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FLLWQ+AY+E F WPD+ RE F A+ Y R+RRFG S++
Sbjct: 193 EQRISNFLLWQIAYAELYFTKILWPDYRRENLFEAIYNYQNRERRFGKTSEQ 244
>gi|139474451|ref|YP_001129167.1| undecaprenyl pyrophosphate synthase [Streptococcus pyogenes str.
Manfredo]
gi|134272698|emb|CAM30969.1| undecaprenyl pyrophosphate synthetase [Streptococcus pyogenes str.
Manfredo]
Length = 249
Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 112/233 (48%), Positives = 143/233 (61%), Gaps = 4/233 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P HIGIIMDGNGRWA R PR GH+ G++ E+ A+E+G+K LT++AFS NW
Sbjct: 15 SIPKHIGIIMDGNGRWAKKRLKPRVFGHKAGMDALQEVTITASELGVKVLTVYAFSTENW 74
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+S ++ L +F K L +NN+K+++IG L +D L L A D+T+ NT
Sbjct: 75 SRPQDEVSFIMNLPVAFFDKYVPVLHENNVKIQMIGETSRLPEDTLAALNAAIDKTKRNT 134
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDL 184
GL L A NY R EI+ A++ I QD+ + D+ LIA YL T +P DPDL
Sbjct: 135 GLILNFALNYGGRAEITSAVRFIAQDVLDAKLNPGDITEDLIANYLMTDHLPYLYRDPDL 194
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IIRT GE RLS+FL WQ AYSEF F P WPDF + A+ YN R RRFG
Sbjct: 195 IIRTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKAELLKAIADYNRRQRRFG 247
>gi|163815218|ref|ZP_02206595.1| hypothetical protein COPEUT_01378 [Coprococcus eutactus ATCC 27759]
gi|158449413|gb|EDP26408.1| hypothetical protein COPEUT_01378 [Coprococcus eutactus ATCC 27759]
Length = 242
Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/227 (47%), Positives = 139/227 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ +IMDGNGRWA R LPR GH +G + I ++GIK+LT++AFS NW+R
Sbjct: 13 PEHVAVIMDGNGRWAKKRFLPRNYGHAEGAKALEAICENCDKLGIKHLTVYAFSTENWKR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
V E++ ++ L + +L N+KV +IG R L +DI+ + + E T NTGL
Sbjct: 73 SVEEVTGIMNLFRKYLVDSIERSNNANMKVNLIGKREGLPEDIVQKMNDLERATANNTGL 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
IA NY RDEI RA K I D G V + D+D L A YLDT VPDPDL+IRT G
Sbjct: 133 QFHIAINYGGRDEIVRATKKILNDAADGKVKAGDIDEKLFADYLDTKGVPDPDLLIRTSG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+R S+FL WQ+AYSEF F WPDF + A+ YN R+RRFG
Sbjct: 193 EERTSNFLPWQLAYSEFYFTDTLWPDFDMDSLVEAVRYYNKRERRFG 239
>gi|56964003|ref|YP_175734.1| undecaprenyl pyrophosphate synthetase [Bacillus clausii KSM-K16]
gi|73920254|sp|Q5WFT2|UPPS_BACSK RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|56910246|dbj|BAD64773.1| undecaprenyl pyrophosphate synthetase [Bacillus clausii KSM-K16]
Length = 257
Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 102/229 (44%), Positives = 156/229 (68%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +GLPR AGHR+G++ N+IV AA + I+ LT++AFS NW+R
Sbjct: 29 PRHVAIIMDGNGRWAKEKGLPRIAGHREGMKTVNKIVRAANTLNIEILTLYAFSTENWKR 88
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L+KL + +LK +L + N++VR++G++ L L + EA ++T+ NTGL
Sbjct: 89 PKAEVEFLLKLPERYLKSELPTLIEENVQVRLMGSKDGLPSYTLHAVDEAIEKTKHNTGL 148
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY SR E++ A++ I + ++ G + + I+ +L ++ + DPDL+IRT G
Sbjct: 149 ILNFALNYGSRFELTSAMQQIAKKVQQGELMPEHITEETISAHLMSNHLRDPDLLIRTSG 208
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+F+LWQ+AYSEF+F+ YWP+F+ F+ A+ Y R RR+GG+
Sbjct: 209 ELRLSNFMLWQIAYSEFLFMDVYWPNFTEHHFYKAVLTYQNRGRRYGGV 257
>gi|314933439|ref|ZP_07840804.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus caprae
C87]
gi|313653589|gb|EFS17346.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus caprae
C87]
Length = 256
Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/232 (44%), Positives = 150/232 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA R +PR GH +G++ +I A+ +GIK LT++AFS NW R
Sbjct: 25 PEHVAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITREASNIGIKYLTLYAFSTENWSR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE++ ++ L +FLK L + N+KV IG L + + +A+++T+ NTGL
Sbjct: 85 PESEVNYIMNLPVNFLKTFLPELIEKNVKVETIGFAEGLPQSTIEAIDQAKEKTKNNTGL 144
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY R EI +++K IF++++S S +D +L+ K+L T D PDP+L+IRT G
Sbjct: 145 TLIFAINYGGRAEIIQSMKEIFEELQSEHQSSEAIDENLLNKHLMTRDYPDPELLIRTSG 204
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FL+WQ +YSEF+F + WPDF L Y R RRFGGLS++
Sbjct: 205 EQRISNFLIWQASYSEFIFNEKLWPDFDENELKECLKIYQSRQRRFGGLSEE 256
>gi|19746875|ref|NP_608011.1| undecaprenyl pyrophosphate synthase [Streptococcus pyogenes
MGAS8232]
gi|50915030|ref|YP_061002.1| undecaprenyl pyrophosphate synthase [Streptococcus pyogenes
MGAS10394]
gi|306826596|ref|ZP_07459902.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus pyogenes
ATCC 10782]
gi|42559994|sp|Q8NZB2|UPPS_STRP8 RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|73920280|sp|Q5X9U4|UPPS_STRP6 RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|19749117|gb|AAL98510.1| putative undecaprenyl pyrophosphate synthetase [Streptococcus
pyogenes MGAS8232]
gi|50904104|gb|AAT87819.1| Undecaprenyl pyrophosphate synthetase [Streptococcus pyogenes
MGAS10394]
gi|304431204|gb|EFM34207.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus pyogenes
ATCC 10782]
Length = 249
Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 112/233 (48%), Positives = 143/233 (61%), Gaps = 4/233 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P HIGIIMDGNGRWA R PR GH+ G++ E+ A+E+G+K LT++AFS NW
Sbjct: 15 SIPKHIGIIMDGNGRWAKKRLKPRVFGHKAGMDALQEVTITASELGVKVLTVYAFSTENW 74
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+S ++ L +F K L +NN+K+++IG L +D L L A D+T+ NT
Sbjct: 75 SRPQDEVSFIMNLPVAFFDKYVPVLHENNVKIQMIGETSRLPEDTLAALNAAIDKTKRNT 134
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDL 184
GL L A NY R EI+ A++ I QD+ + D+ LIA YL T +P DPDL
Sbjct: 135 GLILNFALNYGGRAEITSAVRFIAQDVLDAKLNPGDITEDLIANYLMTDHLPYLYRDPDL 194
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IIRT GE RLS+FL WQ AYSEF F P WPDF + A+ YN R RRFG
Sbjct: 195 IIRTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKAELLKAIADYNRRQRRFG 247
>gi|121533726|ref|ZP_01665553.1| undecaprenyl diphosphate synthase [Thermosinus carboxydivorans
Nor1]
gi|121307717|gb|EAX48632.1| undecaprenyl diphosphate synthase [Thermosinus carboxydivorans
Nor1]
Length = 261
Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/236 (44%), Positives = 146/236 (61%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S+ +S P HI IIMDGNGRWA RGLPR GH G E IV AAE+G+K LT +AF
Sbjct: 22 SLDPNSIPAHIAIIMDGNGRWAQKRGLPRTLGHHAGAETLRNIVKTAAELGVKVLTAYAF 81
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP E+ L++L+ +L L NN+++R IG L + + +A+ +
Sbjct: 82 STENWKRPAEEVDVLMRLLSDYLDSEIDELDSNNVQIRFIGKTDELAPSLYHKVTQAQKR 141
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NTGL L +A NY R E++RA++ I + + +G + ++ I +L T+D+PDPD
Sbjct: 142 TSKNTGLILNLAVNYGGRAELTRAVQLIARKVAAGVIAPDNISEQTIQDHLYTADLPDPD 201
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
L+IR G+ RLS+FLLWQ AY+EF F WPDF+ + A+ Y RDRRFGGL
Sbjct: 202 LLIRPSGDLRLSNFLLWQSAYTEFWFTNTNWPDFTPDHLIQAIADYQRRDRRFGGL 257
>gi|331269637|ref|YP_004396129.1| undecaprenyl diphosphate synthase [Clostridium botulinum BKT015925]
gi|329126187|gb|AEB76132.1| undecaprenyl diphosphate synthase [Clostridium botulinum BKT015925]
Length = 253
Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 147/229 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA + LPR GH+ G+E EIV +++ +K LT++AFS NW+R
Sbjct: 24 PKHIAIIMDGNGRWAKQKKLPRTLGHKAGVETIREIVKECSKLDVKILTLYAFSTENWKR 83
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL+ +LKK L + N+ +R IG+ L + L A + T+ NTGL
Sbjct: 84 PKEEVGALMKLLVEYLKKELKELHEENVVIRTIGDISKLPNICQEELTNAYNTTKNNTGL 143
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY RDEI A+K I + I+ G + D++ LI+++L T ++ DPD+IIRT G
Sbjct: 144 TLNLALNYGGRDEIINAMKVIGEKIQEGDLSPEDINEKLISQFLYTKNLDDPDIIIRTAG 203
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+RLS+FLLWQ AYSEF + WPDF ++ A+ Y RDRRFGGL
Sbjct: 204 EQRLSNFLLWQCAYSEFWYTDIKWPDFKKDDLCKAIYDYQNRDRRFGGL 252
>gi|254294075|ref|YP_003060098.1| undecaprenyl diphosphate synthase [Hirschia baltica ATCC 49814]
gi|254042606|gb|ACT59401.1| undecaprenyl diphosphate synthase [Hirschia baltica ATCC 49814]
Length = 259
Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/229 (44%), Positives = 151/229 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA ARGLPR AGH++G+E + V A + I++LT+F+FS NWRR
Sbjct: 23 PKHVAVIMDGNGRWAQARGLPRIAGHKEGVEALRKTVDACKALAIEHLTVFSFSTENWRR 82
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L L+K F+KK L K ++VR+ G+ L DIL ++ E E +T N
Sbjct: 83 PKAEVDALFALLKLFVKKDLNRLHKEGVRVRIFGSLDGLPADILKLIDECESKTAQNKVF 142
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
N+ IAFNY R EI A + I D+++G + +D S++ +++ +SD+PD DL+IRT G
Sbjct: 143 NVNIAFNYGGRAEIVEAAQKIAADVQAGRLSPESIDESIMQQHMWSSDLPDVDLLIRTSG 202
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+FLLW +AYSE +F+ WPDF + A++ + R+RRFGG+
Sbjct: 203 ELRISNFLLWGIAYSELMFLDILWPDFGKVDMERAIDVFKNRNRRFGGV 251
>gi|20807851|ref|NP_623022.1| undecaprenyl pyrophosphate synthase [Thermoanaerobacter
tengcongensis MB4]
gi|254479462|ref|ZP_05092789.1| undecaprenyl pyrophosphate synthetase 1 [Carboxydibrachium
pacificum DSM 12653]
gi|42559997|sp|Q8RA26|UPPS_THETN RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|20516414|gb|AAM24626.1| Undecaprenyl pyrophosphate synthase [Thermoanaerobacter
tengcongensis MB4]
gi|214034605|gb|EEB75352.1| undecaprenyl pyrophosphate synthetase 1 [Carboxydibrachium
pacificum DSM 12653]
Length = 247
Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/239 (44%), Positives = 147/239 (61%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + + P H+GIIMDGNGRWA RG+PR GH+ G+ E++ + E+GIK LT+
Sbjct: 9 LIKKLDKTRLPQHVGIIMDGNGRWAQKRGMPRVYGHKAGVNAVREVIRSCRELGIKYLTL 68
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E+ L+ L+ +L K L KNN+ V+ IG+ L + +++A
Sbjct: 69 YAFSTENWKRPKEEVDFLMDLLVEYLSKEVDELNKNNVVVKFIGDISRLPEKCQIEIEKA 128
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ T NTGL + IA NY RDEI +A +NI + + + + D+ I ++L T+ P
Sbjct: 129 QKLTEKNTGLVVNIALNYGGRDEIVKATQNICKKVLNRELSPEDITEDTITQHLYTASQP 188
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDLIIRT GEKRLS+FLLWQ AYSE F WPDF + AL Y R RRFGG+
Sbjct: 189 DPDLIIRTSGEKRLSNFLLWQSAYSELWFTEVLWPDFKKRHLIEALLYYQTRKRRFGGV 247
>gi|21911227|ref|NP_665495.1| undecaprenyl pyrophosphate synthase [Streptococcus pyogenes
MGAS315]
gi|28896605|ref|NP_802955.1| undecaprenyl pyrophosphate synthase [Streptococcus pyogenes SSI-1]
gi|42559991|sp|Q8K5S5|UPPS_STRP3 RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|21905440|gb|AAM80298.1| putative undecaprenyl pyrophosphate synthetase [Streptococcus
pyogenes MGAS315]
gi|28811859|dbj|BAC64788.1| putative undecaprenyl pyrophosphate synthetase [Streptococcus
pyogenes SSI-1]
Length = 249
Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 111/231 (48%), Positives = 142/231 (61%), Gaps = 4/231 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA R PR GH+ G++ E+ A+E+G+K LT++AFS NW R
Sbjct: 17 PKHIGIIMDGNGRWAKKRLKPRVFGHKAGMDALQEVTITASELGVKVLTVYAFSTENWSR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S ++ L +F K L +NN+K+++IG L +D L L A D+T+ NTGL
Sbjct: 77 PQDEVSFIMNLPVTFFDKYVPVLHENNVKIQMIGETSRLPEDTLAALNAAIDKTKRNTGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI+ A++ I QD+ + D+ LIA YL T +P DPDLII
Sbjct: 137 ILNFALNYGGRAEITSAVRFIAQDVLDAKLNPGDITEDLIANYLMTDHLPYLYRDPDLII 196
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE RLS+FL WQ AYSEF F P WPDF + A+ YN R RRFG
Sbjct: 197 RTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKAELLKAIADYNHRQRRFG 247
>gi|254519195|ref|ZP_05131251.1| undecaprenyl pyrophosphate synthetase [Clostridium sp. 7_2_43FAA]
gi|226912944|gb|EEH98145.1| undecaprenyl pyrophosphate synthetase [Clostridium sp. 7_2_43FAA]
Length = 253
Score = 223 bits (567), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/229 (46%), Positives = 148/229 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR GH+ G+E ++ A +GIK LT++AFS NW+R
Sbjct: 25 PKHIAIIMDGNGRWAKQRKLPRTMGHKAGVETIRRVIKEAHILGIKYLTLYAFSTENWKR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+KL+ +L+ L +N + ++V+G+ L D + EA + T+ N G+
Sbjct: 85 PDDEVSALMKLLVEYLRSELAELNRNGVVIKVLGDINKLPIDAQKEVNEAINITKDNKGI 144
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IAFNY RDEI RA+K + +D + G++ +D++ + KYL T++ PDPDLIIR G
Sbjct: 145 VLNIAFNYGGRDEIIRAVKMVSEDAKKGNININDINEEIFEKYLYTNNTPDPDLIIRPSG 204
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+R+S+FLLWQ AYSEF + WPDF E A+ Y RDRR+GG+
Sbjct: 205 EQRISNFLLWQCAYSEFWYSNVCWPDFKEEHLHKAIYDYQHRDRRYGGV 253
>gi|251781670|ref|YP_002995972.1| undecaprenyl pyrophosphate synthase [Streptococcus dysgalactiae
subsp. equisimilis GGS_124]
gi|242390299|dbj|BAH80758.1| undecaprenyl pyrophosphate synthetase [Streptococcus dysgalactiae
subsp. equisimilis GGS_124]
gi|323126463|gb|ADX23760.1| Undecaprenyl pyrophosphate synthetase [Streptococcus dysgalactiae
subsp. equisimilis ATCC 12394]
Length = 249
Score = 223 bits (567), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 112/231 (48%), Positives = 142/231 (61%), Gaps = 4/231 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA R PR GH+ G++ ++ AA+++G+K LT++AFS NW R
Sbjct: 17 PKHIGIIMDGNGRWAKKRLKPRVFGHKAGMDALQDVTIAASDLGVKVLTVYAFSTENWSR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S ++ L F K +L KNN+KV++IG L D L L A D+T+ NTGL
Sbjct: 77 PQDEVSFIMNLPVEFFDKYVPTLHKNNVKVQMIGETHRLPADTLTALNAAIDKTKRNTGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI+ A++ I QD+ + D+ LIA YL T +P DPDLII
Sbjct: 137 ILNFALNYGGRAEITSAVRLIAQDVLDAKLNPGDITEDLIANYLMTDHLPYLYRDPDLII 196
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE RLS+FL WQ AYSEF F P WPDF + A+ YN R RRFG
Sbjct: 197 RTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKAELLKAIADYNRRQRRFG 247
>gi|260433806|ref|ZP_05787777.1| undecaprenyl pyrophosphate synthetase 1 [Silicibacter
lacuscaerulensis ITI-1157]
gi|260417634|gb|EEX10893.1| undecaprenyl pyrophosphate synthetase 1 [Silicibacter
lacuscaerulensis ITI-1157]
Length = 243
Score = 223 bits (567), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/234 (45%), Positives = 146/234 (62%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ S P H+ IIMDGNGRWA ARG PR GH G E+V A +GIK LTIFAFS
Sbjct: 8 VQSRGPRHVAIIMDGNGRWAQARGRPRLYGHHAGARRVREVVEACPSLGIKYLTIFAFST 67
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+R E++ L+ L + ++ K +L + ++VR IG+R+ LD ++ ++ E +T
Sbjct: 68 ENWKRTQVEVAGLMSLFRRYIVKEARNLAASGVRVRFIGDRVRLDAKLVELMDMLEAETA 127
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N G++L IA NY RDE++RA K + +D+ G + DVD + KYLDT +PDPDL+
Sbjct: 128 GNDGVHLTIALNYGGRDEVARATKRLARDVAEGRLRPEDVDEETLPKYLDTRVLPDPDLV 187
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRT GE R+S+FLLWQ AYSE+ F+ WPDF+ Y R+RRFG +
Sbjct: 188 IRTSGEARISNFLLWQSAYSEYEFVDTLWPDFTAAELELLCKSYGSRERRFGAV 241
>gi|288904424|ref|YP_003429645.1| undecaprenyl diphosphate synthase [Streptococcus gallolyticus
UCN34]
gi|306830457|ref|ZP_07463627.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
gallolyticus subsp. gallolyticus TX20005]
gi|306832694|ref|ZP_07465831.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus bovis
ATCC 700338]
gi|325977421|ref|YP_004287137.1| undecaprenyl pyrophosphate synthetase [Streptococcus gallolyticus
subsp. gallolyticus ATCC BAA-2069]
gi|288731149|emb|CBI12697.1| undecaprenyl diphosphate synthase [Streptococcus gallolyticus
UCN34]
gi|304425150|gb|EFM28279.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus bovis
ATCC 700338]
gi|304427482|gb|EFM30584.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
gallolyticus subsp. gallolyticus TX20005]
gi|325177349|emb|CBZ47393.1| undecaprenyl pyrophosphate synthetase [Streptococcus gallolyticus
subsp. gallolyticus ATCC BAA-2069]
Length = 249
Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 108/233 (46%), Positives = 145/233 (62%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA R PR GH+ G++ ++ AA+E+G+K LT++AFS NW R
Sbjct: 17 PKHIGIIMDGNGRWAKKRMQPRVMGHKAGMDALQDVTIAASELGVKVLTVYAFSTENWSR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ ++ L F K L NN+KV+VIG L D +K A ++T+ N+GL
Sbjct: 77 PEDEVKFIMNLPVEFFDKYVPELDANNVKVQVIGETDRLPKDTFDAMKRACEKTKHNSGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI+ A+KNI Q++ + D+ +I+ +L T+ +P DPDLII
Sbjct: 137 ILNFALNYGGRSEITEAVKNIAQEVLEAKINPDDITEDVISNHLMTNHLPYLYRDPDLII 196
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSEF F P WPDF ++ A+ +YN R RRFGG+
Sbjct: 197 RTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKDELIKAIAEYNRRHRRFGGI 249
>gi|126663128|ref|ZP_01734126.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase)
[Flavobacteria bacterium BAL38]
gi|126624786|gb|EAZ95476.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase)
[Flavobacteria bacterium BAL38]
Length = 251
Score = 222 bits (566), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 104/242 (42%), Positives = 154/242 (63%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+V + ++S P H+ IIMDGNGRWA +GL R GH G + V A++GI+NLT+
Sbjct: 3 LVQQINTASLPKHLAIIMDGNGRWAKQKGLIRALGHESGTKSVKVTVETCAKLGIQNLTL 62
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP E+ L+KL+ S LKK +L+ NNIK+ IGN +L + L+E
Sbjct: 63 YAFSTENWNRPKLEVETLMKLLISSLKKEIKTLQSNNIKLNAIGNLTNLPTKVQKELQEV 122
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
D+T NT + L +A +Y +R+EI +A+K I +++ + +D S+I ++L T ++P
Sbjct: 123 IDKTSENTRMTLTLALSYGAREEIVQAVKKISDKVKNNIISEQAIDESIINQHLYTHNLP 182
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
D DL+IRT GE R+S+FLLWQ+AY+EF F WPDF+ + A+ Y R+RRFG S
Sbjct: 183 DVDLVIRTSGEHRISNFLLWQIAYAEFYFTDVLWPDFTENNLYEAIISYQKRERRFGKTS 242
Query: 241 KK 242
++
Sbjct: 243 EQ 244
>gi|298207449|ref|YP_003715628.1| Undecaprenyl pyrophosphate synthase [Croceibacter atlanticus
HTCC2559]
gi|83850085|gb|EAP87953.1| Undecaprenyl pyrophosphate synthase [Croceibacter atlanticus
HTCC2559]
Length = 258
Score = 222 bits (566), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 105/232 (45%), Positives = 151/232 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA +GL R AGH KG + E V AE+G+KNLT++AFS NW R
Sbjct: 25 PKHIAIIMDGNGRWAKKQGLLRVAGHEKGTKAVREAVEGCAELGVKNLTLYAFSTENWNR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ +L+ L+ S LKK +L+ N IK+ IG SL L E +++T+ NT +
Sbjct: 85 PKFEVDKLMNLLVSSLKKEIKTLQDNKIKLSTIGTISSLPKKAQKELAEVKEKTKDNTHM 144
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL +A +Y SR+EI + +K I + + S + D+ + LI ++L T+ +PD DL+IRT G
Sbjct: 145 NLTLALSYGSREEILQMVKGIGEQVASNQITPEDITTKLIEEHLYTNFLPDVDLLIRTSG 204
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FLLWQ+AY+E F WPDF ++ +A++ Y R+RRFG S++
Sbjct: 205 EQRISNFLLWQIAYAELFFTEVLWPDFRKKDLLNAIHNYQNRERRFGKTSEQ 256
>gi|322411034|gb|EFY01942.1| putative undecaprenyl pyrophosphate synthetase [Streptococcus
dysgalactiae subsp. dysgalactiae ATCC 27957]
Length = 249
Score = 222 bits (566), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 112/231 (48%), Positives = 142/231 (61%), Gaps = 4/231 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA R PR GH+ G++ ++ AA+++G+K LT++AFS NW R
Sbjct: 17 PKHIGIIMDGNGRWAKKRLKPRVFGHKAGMDALQDVTIAASDLGVKVLTVYAFSTENWSR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S ++ L F K +L KNN+KV++IG L D L L A D+T+ NTGL
Sbjct: 77 PQDEVSFIMNLPVEFFDKYVPTLHKNNVKVQMIGETHRLPVDTLTALNAAIDKTKRNTGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI+ A++ I QD+ + D+ LIA YL T +P DPDLII
Sbjct: 137 ILNFALNYGGRAEITSAVRLIAQDVLDAKLNPGDITEDLIANYLMTDHLPYLYRDPDLII 196
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE RLS+FL WQ AYSEF F P WPDF + A+ YN R RRFG
Sbjct: 197 RTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKAELLKAIADYNRRQRRFG 247
>gi|149183488|ref|ZP_01861917.1| UppS [Bacillus sp. SG-1]
gi|148848800|gb|EDL63021.1| UppS [Bacillus sp. SG-1]
Length = 264
Score = 222 bits (566), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 105/230 (45%), Positives = 144/230 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R LPR AGH +G++V +I A +G+K LT++AFS NW+R
Sbjct: 30 PNHIAIIMDGNGRWAKKRALPRIAGHHEGMKVVRKITKMANALGVKTLTLYAFSTENWKR 89
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL + FL L + N+KV ++G +L +K+A +T N GL
Sbjct: 90 PKMEVEYLMKLPEEFLGTFLPELIEENVKVTMMGYEDNLPSHTSNAIKKAMKETEHNDGL 149
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY SR EI A+K++ D+ +G + + ++ + YL T D+PDPDL+IRT G
Sbjct: 150 VLNFALNYGSRFEIIEAVKDVLNDVSNGIIDKNQINEETFSNYLMTKDLPDPDLLIRTSG 209
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E RLS+F+LWQ+AY+EF F P WPDF E A+ Y R RRFGG+
Sbjct: 210 EIRLSNFMLWQLAYTEFWFTPVLWPDFQEEHLIEAIEVYQGRSRRFGGVQ 259
>gi|222152441|ref|YP_002561616.1| undecaprenyl pyrophosphate synthase [Streptococcus uberis 0140J]
gi|222113252|emb|CAR40767.1| undecaprenyl pyrophosphate synthetase [Streptococcus uberis 0140J]
Length = 249
Score = 222 bits (566), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 112/233 (48%), Positives = 142/233 (60%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA R PR GH+ G++ E+ AA++ G+K LT++AFS NW R
Sbjct: 17 PKHIGIIMDGNGRWAKKRLKPRVFGHKAGMDALQEVTIAASQYGVKVLTVYAFSTENWSR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S ++ L F K L KNN+++++IG L + L L A + TR N+GL
Sbjct: 77 PQDEVSFIMNLPVEFFDKYVPELNKNNVRIQMIGETHRLPEATLSALNRAIEATRKNSGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI+ A+K I QD+ ++ D+ LIA YL T +P DPD II
Sbjct: 137 VLNFALNYGGRAEITNAVKLIAQDVLDANLNPGDITEDLIANYLLTDHLPYLYRDPDFII 196
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSE F P WPDF + F AL +YN R RRFGGL
Sbjct: 197 RTSGELRLSNFLPWQSAYSELYFTPILWPDFKKTAFEEALREYNRRHRRFGGL 249
>gi|327441020|dbj|BAK17385.1| undecaprenyl pyrophosphate synthase [Solibacillus silvestris
StLB046]
Length = 264
Score = 222 bits (566), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 104/233 (44%), Positives = 152/233 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH +G++ +I A ++G++ LT++AFS NW+R
Sbjct: 30 PTHIAIIMDGNGRWAKKRSLPRVAGHHEGMKTIRKITRCACDLGVQVLTLYAFSTENWKR 89
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE+ L++L + FL L + NIKV +IG SL D LK+A + T NTGL
Sbjct: 90 PKSEVEFLMRLPEQFLNSFLPELMERNIKVEMIGVMDSLPDYTQSALKKAMEATAGNTGL 149
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY R EI A++ + +++E+GS+ +++ I++Y+ T+ +P+PDL+IRT G
Sbjct: 150 VLNFAMNYGGRAEIVMAMQQLLKEVEAGSLTIDELNEQHISQYVMTAHLPEPDLLIRTSG 209
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
E R+S+F+LWQ+AY+EF F +WPDF A++ Y R+RR+GGL +G
Sbjct: 210 EVRISNFMLWQLAYTEFWFTDTHWPDFDEACLKEAISVYQNRNRRYGGLKGEG 262
>gi|160934098|ref|ZP_02081485.1| hypothetical protein CLOLEP_02961 [Clostridium leptum DSM 753]
gi|156866771|gb|EDO60143.1| hypothetical protein CLOLEP_02961 [Clostridium leptum DSM 753]
Length = 249
Score = 222 bits (565), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 102/229 (44%), Positives = 149/229 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+GIIMDGNGRWA RG+PR AGH G F I A++GI+ LT++AFS NW+R
Sbjct: 21 PRHLGIIMDGNGRWAKKRGMPRSAGHTVGAANFKTITRYCAKIGIEYLTVYAFSTENWKR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +EI+ L+KL K +L++ + ++IKVR IG+ + D+ +++E + + TG+
Sbjct: 81 PSAEINGLMKLFKQYLEESLRDFRDDDIKVRFIGDTEAFSSDLRQLIEETREVCKDRTGM 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY RDEI RA+K I Q + G + ++ + +++L T+ PDPDLIIR G
Sbjct: 141 VLNIAMNYGGRDEILRAVKQISQKVSQGELTQEEITEEVFSRHLYTAGQPDPDLIIRPSG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+R+S+FLLWQ AY+E++ + WPDF+ AL +Y R+RRFGG+
Sbjct: 201 EQRISNFLLWQSAYTEYIIMDILWPDFTTADLDAALAEYARRNRRFGGV 249
>gi|238019364|ref|ZP_04599790.1| hypothetical protein VEIDISOL_01228 [Veillonella dispar ATCC 17748]
gi|237864063|gb|EEP65353.1| hypothetical protein VEIDISOL_01228 [Veillonella dispar ATCC 17748]
Length = 254
Score = 222 bits (565), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 102/233 (43%), Positives = 151/233 (64%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S+ P H+ IIMDGNGRWA RG+PR GHR G +V +IV AA E+GI+ LT++ FS
Sbjct: 18 SNVIPKHVAIIMDGNGRWAKRRGMPRSMGHRAGADVLKQIVIAADEIGIRALTVYGFSTE 77
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW+RP E+S L+ LIK +L + ++N+++R IG +L D++ ++ +AE T+
Sbjct: 78 NWKRPEQEVSLLMALIKEYLNNNVKYMHEHNVRIRFIGYIGALSDELQKIIHDAELLTQN 137
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTGL L +A NY RDEI R I++I + G++ + ++ ++ L T + D DL+I
Sbjct: 138 NTGLTLQLAINYGGRDEIVRTIRDITNSVVDGTITTDEITEDYVSSQLFTKEFSDVDLLI 197
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
R + R+S+FLLWQ+AY+EF F +WPDF++E A+ Y R+RRFGGL
Sbjct: 198 RPSSDFRISNFLLWQLAYAEFWFTDLHWPDFTKETLLEAVAAYQKRERRFGGL 250
>gi|224368821|ref|YP_002602982.1| UppS [Desulfobacterium autotrophicum HRM2]
gi|223691537|gb|ACN14820.1| UppS [Desulfobacterium autotrophicum HRM2]
Length = 255
Score = 222 bits (565), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 100/227 (44%), Positives = 146/227 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA R + R GH++G+E IV AA ++GI LT++AFS NW R
Sbjct: 17 PRHVAVIMDGNGRWAKKRFMNRVNGHQQGVETVRTIVTAARQIGIDVLTLYAFSTENWSR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE+ L+ L+K FL K +L + + + VIG + L DD+ ++ + QTR NTG+
Sbjct: 77 PASEVKALMVLLKRFLAKEIDTLDRQGVCLNVIGQQSRLPDDVQTQIERSMVQTRGNTGM 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y R+EI+RA++ I ++ SG + D+ +A+ L T+ PDPD++IRT G
Sbjct: 137 VLNLALSYGGREEITRAVRAIVNEVSSGGLSVQDITEETVAERLYTAGQPDPDVLIRTSG 196
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E RLS+F+LWQVAY+E WPDFS++ F + QY R+RR+G
Sbjct: 197 EMRLSNFMLWQVAYAELFITDTLWPDFSQKEFLDIIRQYQTRERRYG 243
>gi|317504633|ref|ZP_07962600.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella salivae DSM
15606]
gi|315664254|gb|EFV03954.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella salivae DSM
15606]
Length = 247
Score = 222 bits (565), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 101/237 (42%), Positives = 154/237 (64%), Gaps = 2/237 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M AS+ + P HI IIMDGNGRWAA RG PR GH+ G++ I + A +G+K LT+
Sbjct: 1 MEASLDRTRIPKHIAIIMDGNGRWAAERGKPRSYGHQAGVDAVRRITSEATRLGVKFLTL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW RP EIS L+ L+ + L+ + KNN++ RVIG+R L ++ L+E
Sbjct: 61 YTFSTENWNRPADEISALMGLVLTSLEDEIF--MKNNVRFRVIGDRKRLPAEVEQKLRET 118
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E+ T+ N+ + + +A +YS+R E+++A++ + + + S+ ++ +I+++L TS +P
Sbjct: 119 EEHTKTNSAMTMVVALSYSARWEMAQAMRELLTEHKDKSLAPEEITEEIISRHLQTSFMP 178
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DP+L+IRTGGE R+S+FLLWQ+AYSE F YWPDF+ + A+ Y R RRFG
Sbjct: 179 DPELLIRTGGELRISNFLLWQIAYSELYFCDTYWPDFNEDDLHKAILSYQNRQRRFG 235
>gi|322386934|ref|ZP_08060558.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus cristatus
ATCC 51100]
gi|321269216|gb|EFX52152.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus cristatus
ATCC 51100]
Length = 249
Score = 222 bits (565), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/233 (46%), Positives = 145/233 (62%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA R PR GH+ G+E E+ AA E+G++ LT++AFS NW R
Sbjct: 17 PKHIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQEVTIAAKEMGVQVLTVYAFSTENWTR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S ++ L F + L +NN+K+++IG+ L L++AED TRLNTGL
Sbjct: 77 PEKEVSFIMNLPVEFYDRYVPELHRNNVKIQMIGDTKRLPKATFEALEKAEDLTRLNTGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI++A++ + QD+ V D+ ++ YL TS +P DPDL+I
Sbjct: 137 ILNFALNYGGRAEINQAVQKLAQDVLDAKVQPADITEEMLGDYLYTSSLPVSLRDPDLVI 196
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSE F WPDF + A+ +YN R+RRFGG+
Sbjct: 197 RTSGELRLSNFLPWQTAYSELYFTDILWPDFDEKALKDAVVEYNRRNRRFGGV 249
>gi|159044044|ref|YP_001532838.1| undecaprenyl diphosphate synthase [Dinoroseobacter shibae DFL 12]
gi|157911804|gb|ABV93237.1| undecaprenyl diphosphate synthase [Dinoroseobacter shibae DFL 12]
Length = 243
Score = 221 bits (564), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 102/229 (44%), Positives = 147/229 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG PR GH+ G +V A ++GI+ LTIFAFS NW+R
Sbjct: 14 PRHVAIIMDGNGRWAQQRGRPRLFGHQAGARRVRAVVEACPDLGIEYLTIFAFSTENWKR 73
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
SE+S L+ L + ++ K + ++VR IG+R+ LD + ++ E E T N +
Sbjct: 74 TQSEVSGLMGLFRRYITKEMEGFLREGVRVRFIGDRIRLDPKLRELMDEVETLTAHNCRV 133
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL IA NY RDE++RA K + Q++ +G + + VD + + ++LDT +PDPDL+IRT G
Sbjct: 134 NLTIALNYGGRDEVARATKRLAQEVAAGRLDAECVDETTLTRFLDTCVLPDPDLVIRTSG 193
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+FLLWQ AY+E+ FI WPDF+ E+F + ++ R RRFG +
Sbjct: 194 EARISNFLLWQSAYAEYEFIDTLWPDFTPEIFAEVVERFGGRARRFGAV 242
>gi|148553388|ref|YP_001260970.1| undecaprenyl pyrophosphate synthetase [Sphingomonas wittichii RW1]
gi|148498578|gb|ABQ66832.1| Undecaprenyl pyrophosphate synthetase [Sphingomonas wittichii RW1]
Length = 248
Score = 221 bits (564), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 102/231 (44%), Positives = 152/231 (65%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+ P H+ IIMDGNGRWA R LPR AGHR G E V AAA++G++ LT++AFS N
Sbjct: 17 GTAPRHVAIIMDGNGRWAKRRFLPRVAGHRAGAEAVRTTVKAAADMGLQALTLYAFSSEN 76
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRR E+S+L+ L++ +L+K L +N I++R IG+ L+ D++ +++E ++T+ N
Sbjct: 77 WRRSTEEVSDLMGLLRHYLRKEVAELDRNGIRLRTIGDINGLEGDLVDLVREGVERTKHN 136
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L+ +A NY ++DE+ RA++ I D+ G + D+ S++I LDT D+P DL+IR
Sbjct: 137 RRLDFVLALNYGAQDEMVRAVREIAADVRDGRLAPEDICSAVIDGRLDTQDLPPLDLLIR 196
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
T GE+RLS+FLLWQ AY+E +F+ WPDF A+ + R+RRFGG
Sbjct: 197 TSGERRLSNFLLWQAAYAELLFVDTLWPDFDGAALAAAIADFGARERRFGG 247
>gi|144897598|emb|CAM74462.1| Undecaprenyl pyrophosphate synthetase [Magnetospirillum
gryphiswaldense MSR-1]
Length = 220
Score = 221 bits (564), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 142/209 (67%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+PP H+ IIMDGNGRWA ARGLPR AGH++G E V AA E+G+ LT++AFS NW
Sbjct: 12 TPPVHVAIIMDGNGRWAKARGLPRTAGHKRGAEAVRRTVEAAREMGVSYLTLYAFSSENW 71
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP E+++L+ L++ +L+ +L KN I++RVIG+R L DI ++ E+E +T NT
Sbjct: 72 KRPTGEVTDLMGLLRLYLRNEVANLHKNGIRLRVIGDRSRLSRDINALIDESEAKTASNT 131
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
L L +A +Y R EI+ A + + D+ G + + +D +A L T+D+PDPDL+IRT
Sbjct: 132 ALTLVLALSYGGRQEITDAARRLACDVAMGRLDADSIDEDALAARLYTADIPDPDLLIRT 191
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDF 217
GEKR+S+FLLWQ AY+EFVF WP F
Sbjct: 192 SGEKRISNFLLWQSAYAEFVFTDVLWPVF 220
>gi|294791803|ref|ZP_06756951.1| di-trans,poly-cis-decaprenylcistransferase [Veillonella sp. 6_1_27]
gi|294457033|gb|EFG25395.1| di-trans,poly-cis-decaprenylcistransferase [Veillonella sp. 6_1_27]
Length = 254
Score = 221 bits (564), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 102/229 (44%), Positives = 147/229 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG+PR GHR G +V EIV AA E+GI+ LT++ FS NW+R
Sbjct: 22 PQHVAIIMDGNGRWAKRRGMPRSMGHRAGADVLKEIVMAADEIGIRALTVYGFSTENWKR 81
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ LIK +L + ++N+++R IG L +D+ ++++AE T+ NTGL
Sbjct: 82 PEQEVSLLMSLIKEYLNNNVKYMHEHNVRIRFIGFIGGLSEDLQKIIQDAELLTQNNTGL 141
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY RDEI R I++I + + G + + ++ L T + D DL+IR
Sbjct: 142 TLQLAINYGGRDEIVRTIRDIVKSVADGVITMDKITEEYVSSQLFTKEFSDVDLLIRPSS 201
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+ R+S+FLLWQ+AY+EF F +WPDF++E A+ Y R+RRFGGL
Sbjct: 202 DFRISNFLLWQLAYAEFWFTDLHWPDFTKETLLEAVAAYQKRERRFGGL 250
>gi|253681610|ref|ZP_04862407.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum D
str. 1873]
gi|253561322|gb|EES90774.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum D
str. 1873]
Length = 253
Score = 221 bits (564), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 145/229 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA + LPR GH+ G+E EIV + +G+K LT++AFS NW+R
Sbjct: 24 PKHIAIIMDGNGRWAKQKKLPRTLGHKSGVETIREIVKECSNLGVKILTLYAFSTENWKR 83
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL+ +LKK L + N+ +R IG+ L L A + T+ NTGL
Sbjct: 84 PKEEVGALMKLLVEYLKKELKELHEENVIIRTIGDISKLPKICQEELTNAYNTTKNNTGL 143
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY RDEI A+K I I+ G++ D++ +I++ L T ++ DPD+IIRT G
Sbjct: 144 ILNLALNYGGRDEIINAMKEIGAKIKEGTLSPEDINEEVISQVLYTKNLSDPDIIIRTAG 203
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+RLS+FLLWQ AYSEF + WPDF ++ A+ Y RDRRFGGL
Sbjct: 204 EQRLSNFLLWQCAYSEFWYTDIKWPDFKKDDLCKAIYDYQNRDRRFGGL 252
>gi|315641201|ref|ZP_07896278.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus italicus
DSM 15952]
gi|315482968|gb|EFU73487.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus italicus
DSM 15952]
Length = 270
Score = 221 bits (563), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 106/236 (44%), Positives = 150/236 (63%), Gaps = 4/236 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R LPR AGH++G+E +I A+++G+K LT++AFS NW+R
Sbjct: 33 PEHIAIIMDGNGRWAQNRRLPRVAGHKEGMETVKKITKHASKLGVKVLTLYAFSTENWKR 92
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L F K L K N+KV V+G + L +K A DQT++NTG+
Sbjct: 93 PTEEVDFLMQLPVDFFDKFVPELIKENVKVHVMGYKEHLPAHTQKAVKRAIDQTKMNTGM 152
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY SR EI A++ I +++ + + ++AK+L T +P DP L+I
Sbjct: 153 VLNFALNYGSRAEIITAVQEIASEVKENQLAVDGISEEVLAKHLMTGFLPIELRDPSLVI 212
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE+R+S+FLLWQ+AYSEF F +WPDF +L A+ Y RDRRFGG+ ++
Sbjct: 213 RTSGEERISNFLLWQIAYSEFFFTKAFWPDFDDKLLEEAIAIYQHRDRRFGGVKEE 268
>gi|260063794|ref|YP_003196874.1| Undecaprenyl pyrophosphate synthase [Robiginitalea biformata
HTCC2501]
gi|88783239|gb|EAR14412.1| Undecaprenyl pyrophosphate synthase [Robiginitalea biformata
HTCC2501]
Length = 246
Score = 221 bits (563), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 103/241 (42%), Positives = 153/241 (63%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+A + P H+ IIMDGNGRWA RG R GH G++ E V AA++G++ LT++
Sbjct: 4 IAEIKKGRLPRHLAIIMDGNGRWAKQRGKLRVFGHENGVKAVRETVETAAKIGVEYLTLY 63
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E+ L+KL+ + L+K +L NNI++R IG SL L L+E
Sbjct: 64 AFSTENWKRPKLEVETLMKLLVASLRKELKTLNDNNIRLRAIGRIESLPKKALKELREVM 123
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ T NTG L +A +Y SR+E++ A+K++ +++ + D+D ++I ++L T D+PD
Sbjct: 124 EMTGKNTGTTLTLALSYGSREELTTAVKSLCTKVKNNIISPGDIDEAIINEHLYTHDLPD 183
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRT GE R+S+FLLWQ+AY+E F +WPDFS + AL Y R+RRFG S+
Sbjct: 184 VDLLIRTSGEHRISNFLLWQIAYAELYFTDVFWPDFSEQHLIEALKDYQNRERRFGKTSE 243
Query: 242 K 242
+
Sbjct: 244 Q 244
>gi|241895747|ref|ZP_04783043.1| di-trans-poly-cis-decaprenylcistransferase [Weissella
paramesenteroides ATCC 33313]
gi|241870790|gb|EER74541.1| di-trans-poly-cis-decaprenylcistransferase [Weissella
paramesenteroides ATCC 33313]
Length = 263
Score = 221 bits (563), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 109/243 (44%), Positives = 154/243 (63%), Gaps = 3/243 (1%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
V + + P HI IIMDGNGRWA + LPR AGH++G+EV +I AA+++G+K LT++
Sbjct: 15 VVELDNQQIPQHIAIIMDGNGRWAKGQNLPRVAGHQRGMEVVKDITKAASDLGVKVLTLY 74
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP +E+ L+KL F L NNI+V VIG L ++ A
Sbjct: 75 AFSTENWKRPETEVGFLMKLPGKFFDTFVPDLIANNIRVNVIGYVDQLPASTQKAVQNAI 134
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS---D 178
QT NTG+ L A NY R EI ++ I Q + SG + D+D +++++ + T+ +
Sbjct: 135 AQTANNTGMVLNFALNYGGRAEIVSGVQQIAQRVLSGEIKPEDIDENMLSQSMMTASLNE 194
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DPDL+IRT GE+RLS+FLLWQ+AYSEFVF+ E+WP+F+ + A+ Y R RRFGG
Sbjct: 195 YADPDLLIRTSGEERLSNFLLWQIAYSEFVFVDEHWPEFTASVLKRAIKIYQSRHRRFGG 254
Query: 239 LSK 241
LS+
Sbjct: 255 LSE 257
>gi|312898664|ref|ZP_07758054.1| di-trans,poly-cis-decaprenylcistransferase [Megasphaera
micronuciformis F0359]
gi|310620583|gb|EFQ04153.1| di-trans,poly-cis-decaprenylcistransferase [Megasphaera
micronuciformis F0359]
Length = 259
Score = 221 bits (563), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 99/232 (42%), Positives = 151/232 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG+PR AGH+ G + +I+ AA E+G+K LT++AFS NW+R
Sbjct: 28 PHHVAIIMDGNGRWAKRRGMPRRAGHKAGADTLKQIIVAADELGVKVLTVYAFSTENWKR 87
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S ++ L+ ++LKK L N+++R IG+R L D+ + AE N+GL
Sbjct: 88 PEEEVSYIMNLMLTYLKKNLADLDAKNVQLRFIGDRTRLSKDLQELFNTAETSMHKNSGL 147
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ +A NY R EI+ A+K+I +D+E+ + + + LI+ YL T+ + DL+IR G
Sbjct: 148 IVNVAVNYGGRGEIATAVKSIVKDVENKKIDASQISEELISTYLYTAPENEVDLLIRPGA 207
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+ R+S++LLWQ+AY+EF + WPDF+++ A+ Y RDRRFGGL ++
Sbjct: 208 DLRISNYLLWQIAYAEFWYTDLCWPDFTKDTLIEAIKSYQGRDRRFGGLHEE 259
>gi|73662817|ref|YP_301598.1| undecaprenyl pyrophosphate synthase [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
gi|82582321|sp|Q49X45|UPPS_STAS1 RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|72495332|dbj|BAE18653.1| undecaprenyl pyrophosphate synthetase [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
Length = 254
Score = 221 bits (563), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 102/229 (44%), Positives = 147/229 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA R LPR GH +G++ +I A+++GIK LT++AFS NW R
Sbjct: 26 PEHVAIIMDGNGRWAKQRKLPRIKGHYQGMQTVKKITKVASDIGIKYLTLYAFSTENWTR 85
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E++ ++ L +FLK L +NN+KV IG L L + +A++ T+ NTGL
Sbjct: 86 PENEVNYIMNLPVNFLKTFLPELIENNVKVETIGFMEYLPSSTLKAIAKAKEDTKDNTGL 145
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY R EI ++K I+ ++ + + S D+ +I +L T PDPDL+IRT G
Sbjct: 146 KLIFAINYGGRAEILNSVKTIYDELTAKGLTSDDITEQMIDDHLMTHAYPDPDLLIRTSG 205
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+R+S+FL+WQV+YSEF+F + WPDF +E + + Y R RRFGGL
Sbjct: 206 EQRISNFLIWQVSYSEFIFNEKLWPDFDKEELINCIKIYQSRQRRFGGL 254
>gi|325104677|ref|YP_004274331.1| undecaprenyl diphosphate synthase [Pedobacter saltans DSM 12145]
gi|324973525|gb|ADY52509.1| undecaprenyl diphosphate synthase [Pedobacter saltans DSM 12145]
Length = 246
Score = 221 bits (563), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 102/236 (43%), Positives = 157/236 (66%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+S P HI +IMDGNGRWA +G R GH+ G+ + V AAE+G++NLT++AFS
Sbjct: 9 TSRLPKHIAVIMDGNGRWAKEQGKLRVFGHKNGVIAVRDTVEGAAEIGVENLTLYAFSTE 68
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP E++ L++L+ S + K +LKKNN+++ IG+ +L LK+A ++T
Sbjct: 69 NWNRPKLEVTALMELLVSTIAKETETLKKNNVRLNAIGDLAALPKRCYKELKDAMEKTSG 128
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NT L L +A +YSSR EI+ A KN+ D+++G + ++ + + YL T+++PDP+L+I
Sbjct: 129 NTRLTLTLALSYSSRWEITEAAKNLAADVKAGKIDLGSINEQVFSGYLSTANLPDPELMI 188
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE R+S++LLWQ+AY+E F P+ WPDF +E F A+ + R+RRFG S++
Sbjct: 189 RTSGELRMSNYLLWQLAYAELYFTPKLWPDFRKEDLFEAIVDFQQRERRFGLTSEQ 244
>gi|323705411|ref|ZP_08116986.1| undecaprenyl diphosphate synthase [Thermoanaerobacterium
xylanolyticum LX-11]
gi|323535313|gb|EGB25089.1| undecaprenyl diphosphate synthase [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 253
Score = 221 bits (563), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 109/229 (47%), Positives = 147/229 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG R GHR G+E IV A++E+GIK LT++AFS NW+R
Sbjct: 25 PKHVAIIMDGNGRWAKKRGFIRTLGHRAGMEAVRRIVKASSEIGIKYLTLYAFSTENWKR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
PV E++ L+ L+ +L + L +NN+K+ IG+ + + +KE+E+ T+ NTGL
Sbjct: 85 PVDEVNGLMDLLIEYLGREVNELNENNVKLNFIGDLSMIPEKCRIKIKESEEITKNNTGL 144
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R EI RA K I + SG + +D+D ++IA L TS PDPDLIIR G
Sbjct: 145 TLNIALNYGGRSEIVRAFKMIGSSLLSGKIDLNDIDENVIADNLYTSGQPDPDLIIRPSG 204
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+F+LWQ AYSE F WPDF ++ A+ Y R+RRFGG+
Sbjct: 205 ELRISNFMLWQSAYSELWFSDVLWPDFEKKHLLQAIFDYQKRNRRFGGI 253
>gi|282850151|ref|ZP_06259530.1| di-trans,poly-cis-decaprenylcistransferase [Veillonella parvula
ATCC 17745]
gi|282579644|gb|EFB85048.1| di-trans,poly-cis-decaprenylcistransferase [Veillonella parvula
ATCC 17745]
Length = 254
Score = 221 bits (563), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 102/229 (44%), Positives = 147/229 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG+PR GHR G +V EIV AA E+GI+ LT++ FS NW+R
Sbjct: 22 PQHVAIIMDGNGRWAKRRGMPRSMGHRAGADVLKEIVMAADEIGIRALTVYGFSTENWKR 81
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ LIK +L + ++N+++R IG L +D+ ++++AE T+ NTGL
Sbjct: 82 PEQEVSLLMSLIKEYLNNNVKFMHEHNVRIRFIGFIGGLSEDLQKIIQDAELLTQNNTGL 141
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY RDEI R I++I + + G + + ++ L T + D DL+IR
Sbjct: 142 TLQLAINYGGRDEIVRTIRDIVKSVADGVITMDKITEEYVSSQLFTKEFSDVDLLIRPSS 201
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+ R+S+FLLWQ+AY+EF F +WPDF++E A+ Y R+RRFGGL
Sbjct: 202 DFRISNFLLWQLAYAEFWFTDLHWPDFTKETLLEAVAAYQKRERRFGGL 250
>gi|257439606|ref|ZP_05615361.1| di-trans,poly-cis-decaprenylcistransferase [Faecalibacterium
prausnitzii A2-165]
gi|257197973|gb|EEU96257.1| di-trans,poly-cis-decaprenylcistransferase [Faecalibacterium
prausnitzii A2-165]
Length = 239
Score = 221 bits (563), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 100/226 (44%), Positives = 149/226 (65%), Gaps = 1/226 (0%)
Query: 14 IGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVS 73
IGIIMDGNGRWA RGLPR AGH+KG VF +I E+G+ ++T +AFS NW+RP+
Sbjct: 15 IGIIMDGNGRWAKQRGLPRTAGHKKGAAVFQDIANYCEELGVSSVTFYAFSTENWKRPLE 74
Query: 74 EISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLF 133
E+S ++KL +L KGF + K NI+++ +G+R +LD + ++ E E+ + TG+ L
Sbjct: 75 EVSAIMKLFGEYLLKGF-NYKDRNIRIKFLGDRAALDAKLQKLMNELEEDSAAKTGMTLN 133
Query: 134 IAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKR 193
IA NY R EI RA + + Q + G++ D+ +++ ++ T+ DPD I+R GEKR
Sbjct: 134 IAVNYGGRPEIVRAARQLAQQVAEGTLKPEDITEEMMSDHMYTAGQKDPDFILRPSGEKR 193
Query: 194 LSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
LS+F+LWQ AY+E V + WPDF+R+ A+ ++N R RRFGG+
Sbjct: 194 LSNFMLWQAAYAELVEMDVLWPDFTRDDLDAAITEFNKRSRRFGGI 239
>gi|18310678|ref|NP_562612.1| undecaprenyl diphosphate synthase [Clostridium perfringens str. 13]
gi|110801370|ref|YP_696383.1| undecaprenyl diphosphate synthase [Clostridium perfringens ATCC
13124]
gi|110803535|ref|YP_698983.1| undecaprenyl pyrophosphate synthase [Clostridium perfringens SM101]
gi|168208113|ref|ZP_02634118.1| undecaprenyl diphosphate synthase [Clostridium perfringens E str.
JGS1987]
gi|168211416|ref|ZP_02637041.1| undecaprenyl diphosphate synthase [Clostridium perfringens B str.
ATCC 3626]
gi|168214471|ref|ZP_02640096.1| undecaprenyl diphosphate synthase [Clostridium perfringens CPE str.
F4969]
gi|168216983|ref|ZP_02642608.1| undecaprenyl diphosphate synthase [Clostridium perfringens NCTC
8239]
gi|169342721|ref|ZP_02863762.1| undecaprenyl diphosphate synthase [Clostridium perfringens C str.
JGS1495]
gi|182627140|ref|ZP_02954855.1| undecaprenyl diphosphate synthase [Clostridium perfringens D str.
JGS1721]
gi|42559847|sp|Q8XJQ9|UPPS_CLOPE RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|18145359|dbj|BAB81402.1| undecaprenyl pyrophosphate synthase [Clostridium perfringens str.
13]
gi|110676017|gb|ABG85004.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium perfringens
ATCC 13124]
gi|110684036|gb|ABG87406.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium perfringens
SM101]
gi|169299227|gb|EDS81297.1| undecaprenyl diphosphate synthase [Clostridium perfringens C str.
JGS1495]
gi|170660606|gb|EDT13289.1| undecaprenyl diphosphate synthase [Clostridium perfringens E str.
JGS1987]
gi|170710581|gb|EDT22763.1| undecaprenyl diphosphate synthase [Clostridium perfringens B str.
ATCC 3626]
gi|170714048|gb|EDT26230.1| undecaprenyl diphosphate synthase [Clostridium perfringens CPE str.
F4969]
gi|177907477|gb|EDT70143.1| undecaprenyl diphosphate synthase [Clostridium perfringens D str.
JGS1721]
gi|182380984|gb|EDT78463.1| undecaprenyl diphosphate synthase [Clostridium perfringens NCTC
8239]
Length = 253
Score = 221 bits (563), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 104/236 (44%), Positives = 150/236 (63%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
++ P HI IIMDGNGRWA RGLPR GHR G++ IV ++G+K LT++AFS
Sbjct: 18 LIEDKMPKHIAIIMDGNGRWAKKRGLPRTMGHRAGVKTIKTIVKECDKLGVKYLTLYAFS 77
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E++ L+KL+ F+K L +N ++V+ IG+ ++ + A ++T
Sbjct: 78 TENWKRPEDEVNALMKLVVEFIKNEIDELHQNGVRVQTIGDLSRFPEEPKKAILWAMEKT 137
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NTG+ L +A NY R+EI R IK++ +D+++G + D++ + YL T +PDPDL
Sbjct: 138 KDNTGVVLSLALNYGGRNEIVRGIKSVIEDVKAGKISIDDINEDMFNDYLYTKGMPDPDL 197
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IIR GE+RLS+FLLWQ AYSEF + WPDF+ E A+ Y RDRRFGG+
Sbjct: 198 IIRPSGEQRLSNFLLWQCAYSEFWYSQINWPDFNGEDLRKAIFDYQNRDRRFGGIK 253
>gi|313203917|ref|YP_004042574.1| undecaprenyl pyrophosphate synthetase [Paludibacter propionicigenes
WB4]
gi|312443233|gb|ADQ79589.1| Undecaprenyl pyrophosphate synthetase [Paludibacter propionicigenes
WB4]
Length = 241
Score = 221 bits (562), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 103/227 (45%), Positives = 150/227 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA RG R GH+ G+ E AAA++GI+ LT++AFS NW R
Sbjct: 14 PKHIAIIMDGNGRWAKERGYDRIFGHQNGVTSVRETTEAAAKIGIEYLTLYAFSTENWGR 73
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE+ L++L+ ++K +L KNN+++ IG+ L + L+ QT NT L
Sbjct: 74 PQSEVDALMELLIDTIEKETPTLNKNNVRLLAIGDISRLPGNAGEKLQRCISQTADNTSL 133
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L +A +YSSR EI+ A+KNI +D+ +G + D++ LI+ YL T+ +PDPDL+IRT G
Sbjct: 134 SLVLALSYSSRWEITNALKNICKDVSAGKISDKDINEELISTYLTTNSIPDPDLLIRTSG 193
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+R+S+FLLWQ+AY+E F +WP+F +E A+ ++ R+RRFG
Sbjct: 194 EERISNFLLWQIAYTELYFTETHWPEFRKENLHEAIYKFQQRERRFG 240
>gi|258423899|ref|ZP_05686784.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
A9635]
gi|257845928|gb|EEV69957.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
A9635]
Length = 256
Score = 221 bits (562), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 103/236 (43%), Positives = 151/236 (63%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
SS+ P+HI IIMDGNGRWA R +PR GH +G++ +I A+++G+K LT++AFS
Sbjct: 21 SSNIPEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITRVASDIGVKYLTLYAFSTE 80
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP SE++ ++ L +FLK L + N+KV IG L + + A+++T
Sbjct: 81 NWSRPESEVNYIMNLPVNFLKTFLPELIEKNVKVETIGFTDKLPKSTIEAINNAKEKTAN 140
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTGL L A NY R E++ +IKN+F ++ + S +D + I +L T D PDP+L+I
Sbjct: 141 NTGLKLIFAINYGGRAELAHSIKNMFDELHQQGLNSDIIDETYINNHLMTKDYPDPELLI 200
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE+R+S+FL+WQV+YSEF+F + WPDF + + Y R RRFGGLS++
Sbjct: 201 RTSGEQRISNFLIWQVSYSEFIFNQKLWPDFDEDELIKCIKIYQSRQRRFGGLSEE 256
>gi|83858384|ref|ZP_00951906.1| undecaprenyl pyrophosphate synthetase [Oceanicaulis alexandrii
HTCC2633]
gi|83853207|gb|EAP91059.1| undecaprenyl pyrophosphate synthetase [Oceanicaulis alexandrii
HTCC2633]
Length = 239
Score = 221 bits (562), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 104/233 (44%), Positives = 149/233 (63%), Gaps = 3/233 (1%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S P H+ IIMDGNGRWAA+R PR GHRKG+E E V AA E+G+++LT+F+FS
Sbjct: 7 SGPTPQHVAIIMDGNGRWAASRDRPRAFGHRKGVEAVREAVRAAGELGVRHLTLFSFSTE 66
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP +E+ L +L++ F+ L ++VR++G R L +++L +++ E +T
Sbjct: 67 NWSRPAAEVEALFELLRRFVAADLDRLHAEGVRVRILGRREGLSEELLKLIETVETRTEA 126
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N +L IAFNY RDEI RA + ++ + D +YLDT+ +PDPDL+I
Sbjct: 127 NDAFSLNIAFNYGGRDEIVRAARRAAVALDGDLSALTEAD---FGQYLDTAALPDPDLVI 183
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE R+S+FLLWQ AY+EFVF+ WPDF + F A+ ++ RDRR+GG+
Sbjct: 184 RTSGEYRISNFLLWQAAYAEFVFMDILWPDFDKAAFQRAIAEFASRDRRYGGV 236
>gi|332522667|ref|ZP_08398919.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus porcinus
str. Jelinkova 176]
gi|332313931|gb|EGJ26916.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus porcinus
str. Jelinkova 176]
Length = 249
Score = 221 bits (562), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 110/233 (47%), Positives = 142/233 (60%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA R PR GH+ G++ E+ A++ G+K LT++AFS NW R
Sbjct: 17 PKHIGIIMDGNGRWAKKRLKPRVFGHKAGMDALQEVTLTASKYGVKVLTVYAFSTENWTR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ ++ L F K L KNN+++++IG L + L LK A + TR N+GL
Sbjct: 77 PQDEVKFIMNLPVEFFDKYVPELNKNNVRIQMIGETHRLPAETLNALKRAIETTRKNSGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI+ A++ I QD+ ++ D+ LIA YL T +P +PDLII
Sbjct: 137 VLNFALNYGGRAEITSAVRMIAQDVLDANLNPGDITEELIANYLMTDHLPYLYRNPDLII 196
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSEF F P WPDF F AL +YN R RRFGG+
Sbjct: 197 RTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKSAEFIKALEEYNRRHRRFGGV 249
>gi|223940470|ref|ZP_03632321.1| undecaprenyl diphosphate synthase [bacterium Ellin514]
gi|223890873|gb|EEF57383.1| undecaprenyl diphosphate synthase [bacterium Ellin514]
Length = 245
Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 144/229 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA RGLPR GHR G E I+ A E+GIK LT++AFS+ NW R
Sbjct: 17 PRHVAMIMDGNGRWAKQRGLPRVEGHRIGAESVRAIIRTAGELGIKYLTLYAFSVENWNR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+K + ++K F L K+N+++ VIG L + + LK+ ++ N GL
Sbjct: 77 PKDEVDTLMKYLARYMKSEFAELNKSNVRLEVIGQIHRLPEFVQKQLKKTQEGLSKNNGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y R EI A+++I + G + +++ ++A +L T + PDPD++IRT G
Sbjct: 137 TLIMALSYGGRTEIVEAVRSIAAKAKKGELDPAEINEQVVADHLYTRNWPDPDVLIRTSG 196
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+FLLWQ++YSE V WPDF + F+ AL +Y R RRFGGL
Sbjct: 197 EMRVSNFLLWQISYSELVVTQTLWPDFRKPQFYEALEEYTRRHRRFGGL 245
>gi|227824513|ref|ZP_03989345.1| undecaprenyl diphosphate synthase [Acidaminococcus sp. D21]
gi|226905012|gb|EEH90930.1| undecaprenyl diphosphate synthase [Acidaminococcus sp. D21]
Length = 262
Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 106/233 (45%), Positives = 148/233 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA +G PR GH G + EIV A +GI+ LT +AFS NW+R
Sbjct: 30 PRHVAMIMDGNGRWAKRQGKPRTFGHTYGAKALREIVRYADSIGIEALTAYAFSTENWKR 89
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
PV+E+S ++KL+ +L KK +++R IG+R L D +L ++EAE +T+ N G+
Sbjct: 90 PVTEVSFIMKLLVEYLTNELEEFKKYQVRMRFIGSRKELPDLVLKKMEEAEQETKDNQGI 149
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY + EI A I + +++G++ D+ +L +L T +P PDL+IRTGG
Sbjct: 150 LLTIAINYGGQAEILHAATEIARQVKAGTLQPDDITKALFEDHLYTRGIPAPDLLIRTGG 209
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
+ R+S+FLLWQ+AYSE WPDF+ E F AL Y RDRRFGGL+KK
Sbjct: 210 DLRVSNFLLWQIAYSELWTTDVCWPDFTPERFKEALLSYQKRDRRFGGLTKKA 262
>gi|81428871|ref|YP_395871.1| di-trans-poly-cis-decaprenylcistransferase (undecaprenyl
diphosphate synthetase) [Lactobacillus sakei subsp.
sakei 23K]
gi|78610513|emb|CAI55564.1| Di-trans-poly-cis-decaprenylcistransferase (undecaprenyl
diphosphate synthetase) [Lactobacillus sakei subsp.
sakei 23K]
Length = 251
Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/232 (45%), Positives = 152/232 (65%), Gaps = 3/232 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R +PR AGH+ G+E I AA+ +G+K LT++AFS NW+R
Sbjct: 19 PNHIAIIMDGNGRWANKRLMPRVAGHKAGMENVKTITKAASRMGVKVLTLYAFSTENWKR 78
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L++L F L + N++V+V+GN L + ++A T NTG+
Sbjct: 79 PSDEVNFLMQLPVDFFGTFMPELIEENVRVKVMGNIHDLPEKTQKAAQDAMADTAQNTGM 138
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT---SDVPDPDLIIR 187
L A NY RDEI +A++ I +D SG++ + +D LI++YL T + DP+L+IR
Sbjct: 139 ILNFALNYGGRDEIQQAVQQIAKDAVSGTIEADSIDDDLISQYLMTGFLGEYADPELLIR 198
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
T GE+R+S+FLLWQ+AYSE VF+ E+WPDF+ ++F ++ Y R RRFGGL
Sbjct: 199 TSGEERISNFLLWQIAYSELVFVDEFWPDFTPQVFEKSIFTYQQRHRRFGGL 250
>gi|322373813|ref|ZP_08048348.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sp. C150]
gi|321277185|gb|EFX54255.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sp. C150]
Length = 249
Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 107/233 (45%), Positives = 149/233 (63%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HIGIIMDGNGRWA R PR GH+ G++ ++ A+++G+K LT++AFS NW R
Sbjct: 17 PNHIGIIMDGNGRWAKKRLQPRVMGHKAGMDALQKVTIEASQLGVKVLTVYAFSTENWSR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ ++ L F K L KNN+++ IG+ L + L L++A +QT+ N+GL
Sbjct: 77 PQDEVKFIMNLPVEFFNKYVPELDKNNVRILTIGDNSRLPKETLEALEKAVEQTKHNSGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI A++ I +++E+G + S +D LIAK+L T +P DPDLII
Sbjct: 137 VLNFALNYGGRAEIVSAVQAIAKEVEAGKLSSEAIDEDLIAKHLMTDKLPYLYRDPDLII 196
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSEF F +WPDF ++ A++ YN R RRFGG+
Sbjct: 197 RTSGELRLSNFLPWQSAYSEFYFTDVFWPDFDQKGLRQAISDYNKRHRRFGGV 249
>gi|148982442|ref|ZP_01816757.1| undecaprenyl diphosphate synthase [Vibrionales bacterium SWAT-3]
gi|145960479|gb|EDK25852.1| undecaprenyl diphosphate synthase [Vibrionales bacterium SWAT-3]
Length = 250
Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 99/231 (42%), Positives = 155/231 (67%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ S P HI +IMDGNGRWA A+G PR GH+ G++ + +++AA +GIK +T+FAFS
Sbjct: 8 TDSLPKHIAVIMDGNGRWAKAQGKPRVFGHKNGVQAVRKTISSAARLGIKAVTLFAFSSE 67
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+ L++L S L L KNN+++RVIG++ +D + ++EAE T
Sbjct: 68 NWRRPEEEVGILMELFISVLSSEVKKLHKNNLQLRVIGDKSRFNDRLQKKIEEAEALTST 127
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTG+ + IA NY + +I +A+ +I Q ++SG + D+D ++I ++L +D+P+ DL+I
Sbjct: 128 NTGMVINIAANYGGKWDIQQAMTSIAQQVKSGDINVEDIDEAMITQHLTMADIPEVDLLI 187
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE R+S+F+LWQ+AY+E F ++WPDF+ + A+ + R+RRFG
Sbjct: 188 RTSGECRISNFMLWQLAYAEMYFTEQFWPDFNEDSLVEAVTWFVNRERRFG 238
>gi|28210951|ref|NP_781895.1| undecaprenyl pyrophosphate synthase [Clostridium tetani E88]
gi|42559806|sp|Q895K8|UPPS_CLOTE RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|28203390|gb|AAO35832.1| undecaprenyl pyrophosphate synthetase [Clostridium tetani E88]
Length = 255
Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 147/229 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR GH+ G+E +IV +G++ LT++AFS NW+R
Sbjct: 27 PKHIAIIMDGNGRWAKERKLPRSLGHKAGVETIRDIVKECNNIGVRYLTLYAFSTENWKR 86
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EI+ L++L+ ++L+K L +NN+ V IG+ L L +A ++T+ NTGL
Sbjct: 87 PKEEINALMELLVNYLRKEVAELHQNNVVVNTIGDVSKLPKACEDELMKAYNKTKNNTGL 146
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY RDEI RAIK +++DIE + +V+ L+ YL T +PDPDLIIR G
Sbjct: 147 VLNLALNYGGRDEIIRAIKLMYKDIEKKGLDIENVNEDLLKNYLYTKGMPDPDLIIRPSG 206
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+R+S+FLLWQ AYSEF + WPDF + A+ Y R+RRFGG+
Sbjct: 207 EQRISNFLLWQCAYSEFWYSNIKWPDFKKHHLHKAIKDYQNRNRRFGGV 255
>gi|309775653|ref|ZP_07670652.1| di-trans,poly-cis-decaprenylcistransferase [Erysipelotrichaceae
bacterium 3_1_53]
gi|308916559|gb|EFP62300.1| di-trans,poly-cis-decaprenylcistransferase [Erysipelotrichaceae
bacterium 3_1_53]
Length = 242
Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 106/229 (46%), Positives = 146/229 (63%), Gaps = 1/229 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA RGLPR AGH++G E I A ++G+K LT +AFS NW+R
Sbjct: 15 PQHIAIIMDGNGRWAKKRGLPRTAGHKQGAENIRRIAIACNDLGVKALTCYAFSTENWKR 74
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L KL K F + LKKNNI+V +G ++ V+ A +T+ NTGL
Sbjct: 75 PQDEVDYLCKLPKLFFNRYLAELKKNNIRVTFLGEIERFPEETRKVITSAVAETKQNTGL 134
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY +R EI+ A + QD+ G S +D Y+ T+D+P+ DL+IRT G
Sbjct: 135 ILCLAVNYGARREITLAAQKYAQDVLEGKA-SATIDEEAFGSYMMTADMPELDLMIRTSG 193
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+FLLWQ+AY+E +F P WP+F++E A++++N R+RRFGGL
Sbjct: 194 ELRISNFLLWQLAYAELIFTPVAWPEFTKEELNRAIDEFNHRNRRFGGL 242
>gi|255020971|ref|ZP_05293026.1| Undecaprenyl pyrophosphate synthetase [Acidithiobacillus caldus
ATCC 51756]
gi|254969576|gb|EET27083.1| Undecaprenyl pyrophosphate synthetase [Acidithiobacillus caldus
ATCC 51756]
Length = 251
Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 103/231 (44%), Positives = 154/231 (66%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S++ P H+ IIMDGNGRWA R LPR AGHR+G EV E+V + AE+G+ +LT+FAFS
Sbjct: 7 STTLPRHLAIIMDGNGRWAYRRHLPRVAGHRRGAEVVREMVQSCAELGVAHLTLFAFSTE 66
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+ L+ L + L++ L ++ +++R+IG+R +L+ DI+ +++EAE T
Sbjct: 67 NWRRPPLEVRLLMNLFRLMLRREARRLHEHGVRLRIIGDRRALEADIVALIEEAETLTAS 126
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N L L +A NY R +I++A + +++ ++D + IA +L +D P+PDL+I
Sbjct: 127 NDRLTLNLAVNYGGRWDIAQAARTAALELQRRGGDLAELDEASIAPHLALADSPEPDLLI 186
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RTGGE+R+S+FL+WQ+AY+EF F WPDF R+ AL + R RRFG
Sbjct: 187 RTGGEERISNFLIWQMAYTEFYFTEVLWPDFDRDALEQALRSFAQRQRRFG 237
>gi|317129172|ref|YP_004095454.1| undecaprenyl diphosphate synthase [Bacillus cellulosilyticus DSM
2522]
gi|315474120|gb|ADU30723.1| undecaprenyl diphosphate synthase [Bacillus cellulosilyticus DSM
2522]
Length = 256
Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 110/229 (48%), Positives = 145/229 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA RGLPR AGHR+G+ V +IV A +G++ LT++AFS NW+R
Sbjct: 28 PKHIAIIMDGNGRWAKKRGLPRIAGHREGMNVVRKIVKHANHLGVEVLTLYAFSTENWKR 87
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L + FL K L K N+KVR+ G + +L L + +A T N GL
Sbjct: 88 PKGEVDFLMRLPELFLNKELPELIKENVKVRLTGTKENLPIHTLRAIDKAIKDTEDNNGL 147
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY SR EI A+K ++ I++ D+ +AKYL TS++ DPDL+IRT G
Sbjct: 148 ILNFALNYGSRSEIIEAVKKLYSTIDNEGTSIDDITEESLAKYLMTSELDDPDLLIRTSG 207
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+F+LWQ+AY+EF F WPDFS E A+ Y R RR+GGL
Sbjct: 208 EIRLSNFMLWQLAYTEFWFTEVLWPDFSEESLEEAIRVYQNRARRYGGL 256
>gi|315653425|ref|ZP_07906347.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners
ATCC 55195]
gi|315489350|gb|EFU78990.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners
ATCC 55195]
Length = 239
Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 113/231 (48%), Positives = 147/231 (63%), Gaps = 3/231 (1%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
DH+ IIMDGNGRWA R LPR GHR G+ EI AA E+G+K LT++AFS NW RP
Sbjct: 9 DHLAIIMDGNGRWAQERHLPRIIGHRSGMNKVKEIALAANELGVKVLTLYAFSTENWGRP 68
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E++ L+KL +F K L+KNNIKV ++G L ++K+AE +T N G+
Sbjct: 69 RDEVNYLMKLPINFFDKFMPELQKNNIKVNIMGFNDKLPLATAEIIKKAEQETADNDGMI 128
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS---DVPDPDLIIRT 188
L AFNY SR EI+ AI I DI++ + ++ LI+ YL TS D DPDL+IRT
Sbjct: 129 LNFAFNYGSRQEITAAISKIALDIQNKKIEVDSINEQLISDYLMTSKFGDYADPDLLIRT 188
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE+RLS+F+LWQ+AYSEF F YWPDF+ F + +Y RDRRFG +
Sbjct: 189 SGEERLSNFMLWQLAYSEFYFTKTYWPDFTTYEFKKIVEEYQHRDRRFGKI 239
>gi|229092863|ref|ZP_04223997.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus Rock3-42]
gi|228690485|gb|EEL44268.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus Rock3-42]
Length = 222
Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 102/222 (45%), Positives = 147/222 (66%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA R +PR AGH +G++V +I A+++ +K LT++AFS NW+RP E+
Sbjct: 1 MDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLNVKVLTLYAFSTENWKRPKKEVDY 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+KL + FL L + N++VRVIG + L +++A ++T+ NTGL L A N
Sbjct: 61 LMKLPEEFLGTFLPELIEENVQVRVIGQQDRLPTHTRRAMEKAMEETKENTGLILNFALN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y SRDEI A++++ +D E G V DV +++ YL TS +PDP+L+IRT GE R+S+F
Sbjct: 121 YGSRDEIVSAVQHMMKDSEEGKVRVEDVSEEMLSSYLMTSSLPDPELLIRTSGELRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+LWQ+AYSEF F YWPDF+ E +A+ + R RRFGG+
Sbjct: 181 MLWQIAYSEFWFTDVYWPDFTEEHLLNAITDFQHRGRRFGGV 222
>gi|297208094|ref|ZP_06924525.1| di-trans, poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus ATCC 51811]
gi|297591295|ref|ZP_06949933.1| di-trans, poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus MN8]
gi|300912175|ref|ZP_07129618.1| di-trans, poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus TCH70]
gi|296887337|gb|EFH26239.1| di-trans, poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus ATCC 51811]
gi|297576181|gb|EFH94897.1| di-trans, poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus MN8]
gi|300886421|gb|EFK81623.1| di-trans, poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus TCH70]
gi|320140923|gb|EFW32770.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus MRSA131]
gi|320144361|gb|EFW36127.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus MRSA177]
Length = 267
Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 103/236 (43%), Positives = 150/236 (63%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
SS+ P+HI IIMDGNGRWA R +PR GH +G++ +I A+++G+K LT++AFS
Sbjct: 32 SSNIPEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITRVASDIGVKYLTLYAFSTE 91
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP SE++ ++ L +FLK L + N+KV IG L + + A+++T
Sbjct: 92 NWSRPESEVNYIMNLPVNFLKTFLPELIEKNVKVETIGFTDKLPKSTIEAINNAKEKTAN 151
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTGL L A NY R E+ +IKN+F ++ + S +D + I +L T D PDP+L+I
Sbjct: 152 NTGLKLIFAINYGGRAELVHSIKNMFDELHQQGLNSDIIDETYINNHLMTKDYPDPELLI 211
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE+R+S+FL+WQV+YSEF+F + WPDF + + Y R RRFGGLS++
Sbjct: 212 RTSGEQRISNFLIWQVSYSEFIFNQKLWPDFDEDELIKCIKIYQSRQRRFGGLSEE 267
>gi|172057856|ref|YP_001814316.1| undecaprenyl diphosphate synthase [Exiguobacterium sibiricum
255-15]
gi|171990377|gb|ACB61299.1| undecaprenyl diphosphate synthase [Exiguobacterium sibiricum
255-15]
Length = 245
Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/236 (44%), Positives = 147/236 (62%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ P+HI IIMDGNGRWA RGLPR GHR+G++ E+V A E+G+K+LT++AF
Sbjct: 10 EVIEQQVPEHIAIIMDGNGRWAKKRGLPRIMGHREGMKSVREVVRTANELGVKSLTLYAF 69
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP E+S L+KL FL+ L + N+KV V G L +++A+
Sbjct: 70 STENWTRPEEEVSFLMKLPAQFLESDLKDLNERNVKVEVAGEVSRLPIYTREAVQQAKTD 129
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NTGL L A NY RDEI + ++ I + +++G + + + +I + L T + D D
Sbjct: 130 TANNTGLRLIFALNYGGRDEIVQVMQKIAEKVQAGLLQPDMITNEIIEQELMTGSMTDVD 189
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
L+IRT GE+RLS+FLLWQ AY+EF F WP+F R+ F A+ YN R RRFGG+
Sbjct: 190 LVIRTSGEQRLSNFLLWQAAYAEFYFTDVLWPEFRRDQFLAAIEDYNQRTRRFGGV 245
>gi|258647583|ref|ZP_05735052.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella tannerae
ATCC 51259]
gi|260852380|gb|EEX72249.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella tannerae
ATCC 51259]
Length = 249
Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 150/232 (64%), Gaps = 2/232 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA ARG R GH++G+E I AA+++G+K LT++ FS NW R
Sbjct: 13 PMHVAIIMDGNGRWATARGWDRSVGHQQGVETVRRITTAASDLGVKYLTLYTFSTENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ LI + L++ + +NN+++R++G+ L +D+ L++ +T N+G+
Sbjct: 73 PPEEVAALMSLIFTSLEEELF--MRNNVRLRIVGDLERLPEDVRTSLEDLTARTAENSGM 130
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +YS+R EI+ A + I G + D+ I + L TS +PDPDL+IRTGG
Sbjct: 131 TLVLALSYSARWEITEAARKIAARTAKGELALQDITEKTITEALTTSFMPDPDLLIRTGG 190
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E RLS++LLWQ AYSE F +WPDF+ E F+ A+ Y R+RRFG S++
Sbjct: 191 ELRLSNYLLWQCAYSELYFCDTFWPDFNEEAFYAAVADYQSRERRFGKTSRQ 242
>gi|293400529|ref|ZP_06644674.1| di-trans, poly-cis-decaprenylcistransferase [Erysipelotrichaceae
bacterium 5_2_54FAA]
gi|291305555|gb|EFE46799.1| di-trans, poly-cis-decaprenylcistransferase [Erysipelotrichaceae
bacterium 5_2_54FAA]
Length = 234
Score = 220 bits (560), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 106/229 (46%), Positives = 144/229 (62%), Gaps = 1/229 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA RGLPR AGH++G E +I A E+G+K LT +AFS NW+R
Sbjct: 7 PQHIAIIMDGNGRWAKKRGLPRTAGHKQGAENIRKIAIACNELGVKALTCYAFSTENWKR 66
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE+ L KL K F ++ LKKNNI+V +G ++ V+ A +QT+ NTGL
Sbjct: 67 PESEVEYLCKLPKLFFQRYLAELKKNNIRVTFLGEIERFPNETRSVITTAVEQTKDNTGL 126
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY R EI+ A + D+ G + +D Y+ + +P+ DL+IRT G
Sbjct: 127 ILCLAVNYGGRREITLAAQRYAADVVRG-IADAAIDEEAFGHYMMSEGMPELDLMIRTSG 185
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+FLLWQ+AY+E +F P WPDF R+ A+++Y R+RRFGGL
Sbjct: 186 ELRISNFLLWQLAYAELIFTPVAWPDFDRDCLVEAIDEYTHRNRRFGGL 234
>gi|84686916|ref|ZP_01014800.1| undecaprenyl diphosphate synthase [Maritimibacter alkaliphilus
HTCC2654]
gi|84665113|gb|EAQ11593.1| undecaprenyl diphosphate synthase [Rhodobacterales bacterium
HTCC2654]
Length = 243
Score = 220 bits (560), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 148/227 (65%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA RG PR GH G + E+V A ++G+ ++T+FAFS NW+R
Sbjct: 14 HVAIIMDGNGRWAKERGRPRLFGHHAGAKRAREVVEACPDLGVTHITLFAFSTENWKRTQ 73
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+E++ L+ L + ++ K + L VR IG+R+ LD + ++ + ED T+ N +++
Sbjct: 74 AEVAGLMSLFRRYINKTAHELNDEGACVRFIGDRIKLDPKLRRLMDDLEDLTKDNDRVHV 133
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A NY RDE++RA + + QD+++G + +D + KYLDT +PDPDL+IRT GE
Sbjct: 134 TVALNYGGRDEVARATQRLAQDVKAGKLDPDTIDEETLPKYLDTCMLPDPDLVIRTSGEA 193
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
R+S+FLLWQ AY+E+ FI WPDF R F L+++ +RDRRFG +
Sbjct: 194 RVSNFLLWQSAYAEYEFIDTLWPDFDRAKFAEILDRFAMRDRRFGAV 240
>gi|188588608|ref|YP_001920607.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum
E3 str. Alaska E43]
gi|251778482|ref|ZP_04821402.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum
E1 str. 'BoNT E Beluga']
gi|188498889|gb|ACD52025.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum
E3 str. Alaska E43]
gi|243082797|gb|EES48687.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum
E1 str. 'BoNT E Beluga']
Length = 252
Score = 220 bits (560), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 107/230 (46%), Positives = 142/230 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR GH+ G+E +IV + +GIK LT++AFS NW+R
Sbjct: 23 PQHIAIIMDGNGRWAKKRKLPRSMGHKAGVETIRKIVKESKRLGIKYLTLYAFSTENWKR 82
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L+ +LK+ L KN +K+ V+G+ + L +A T NT +
Sbjct: 83 PKEEVGALMQLLVVYLKREVAELNKNGVKINVLGDMSKFPAECREELNKAIQITNNNTEI 142
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL +A NY RDE+ RAIK I D+E + D+ LI+ Y+ T +PDPDLIIR G
Sbjct: 143 NLNLALNYGGRDELVRAIKLIIDDLEDDKIKKEDISEDLISNYIYTKGMPDPDLIIRPSG 202
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E+R+S+FLLWQ AYSEF + WPDF E A+ Y RDRRFGG+
Sbjct: 203 EQRISNFLLWQCAYSEFWYSDIAWPDFKEEDLQKAILDYQNRDRRFGGVK 252
>gi|167646763|ref|YP_001684426.1| undecaprenyl diphosphate synthase [Caulobacter sp. K31]
gi|167349193|gb|ABZ71928.1| undecaprenyl diphosphate synthase [Caulobacter sp. K31]
Length = 259
Score = 220 bits (560), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 99/228 (43%), Positives = 141/228 (61%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA R LPR GHR G+ V AA +G+ +T+F FS NW RP
Sbjct: 24 HVAIIMDGNGRWAKRRNLPRVLGHRAGVNALKRTVEGAAALGVGVMTVFGFSTENWSRPP 83
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+SEL+ L+K++L+ L + +KVR+IG R L D+L V++ AE +T N L
Sbjct: 84 QEVSELMGLLKAYLESDIDRLAREGVKVRIIGRRTGLAADVLAVIERAESRTSQNNDFLL 143
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+AFNY R +I+ A + + +E G + D+D ++ L TS P PD+I+RT GE+
Sbjct: 144 QVAFNYGGRADITDAARAFAELVERGEARAADLDEAMFGSLLSTSGAPAPDVIVRTSGEQ 203
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
R+S+FLLW+ AY+E V+ WPD+ E AL +Y RDRR+GG++
Sbjct: 204 RISNFLLWECAYAELVYQDVLWPDYGPEHLAAALTEYRSRDRRYGGIA 251
>gi|309805503|ref|ZP_07699548.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners
LactinV 09V1-c]
gi|309808823|ref|ZP_07702708.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners
LactinV 01V1-a]
gi|309809533|ref|ZP_07703391.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners
SPIN 2503V10-D]
gi|312875790|ref|ZP_07735782.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners
LEAF 2053A-b]
gi|325911845|ref|ZP_08174249.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners
UPII 143-D]
gi|329919857|ref|ZP_08276795.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners
SPIN 1401G]
gi|308165154|gb|EFO67392.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners
LactinV 09V1-c]
gi|308167949|gb|EFO70082.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners
LactinV 01V1-a]
gi|308170205|gb|EFO72240.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners
SPIN 2503V10-D]
gi|311088694|gb|EFQ47146.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners
LEAF 2053A-b]
gi|325476351|gb|EGC79513.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners
UPII 143-D]
gi|328936947|gb|EGG33377.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners
SPIN 1401G]
Length = 239
Score = 220 bits (560), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 111/231 (48%), Positives = 148/231 (64%), Gaps = 3/231 (1%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
DH+ IIMDGNGRWA R LPR GHR G+ EI AA E+G+K LT++AFS NW RP
Sbjct: 9 DHLAIIMDGNGRWAQERHLPRIIGHRSGMNKVKEIALAANELGVKVLTLYAFSTENWGRP 68
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E++ L+KL +F K L+KNNIKV ++G L ++K+AE +T N G+
Sbjct: 69 RDEVNYLMKLPINFFDKFMPELQKNNIKVNIMGFNDKLPLATAEIIKKAEQETADNDGMI 128
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS---DVPDPDLIIRT 188
L AFNY SR EI+ AI I DI++ + ++ L++ YL T+ D DPDL+IRT
Sbjct: 129 LNFAFNYGSRQEITAAISKIALDIQNKKIEVDSINEQLVSDYLMTAKFGDYADPDLLIRT 188
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE+RLS+F+LWQ+AYSEF F YWPDF+ + F + +Y RDRRFG +
Sbjct: 189 SGEERLSNFMLWQLAYSEFYFTKTYWPDFTTDEFKKIVEEYQHRDRRFGKI 239
>gi|126654120|ref|ZP_01725938.1| undecaprenyl diphosphate synthase [Bacillus sp. B14905]
gi|169827158|ref|YP_001697316.1| undecaprenyl pyrophosphate synthetase [Lysinibacillus sphaericus
C3-41]
gi|126589400|gb|EAZ83550.1| undecaprenyl diphosphate synthase [Bacillus sp. B14905]
gi|168991646|gb|ACA39186.1| Undecaprenyl pyrophosphate synthetase [Lysinibacillus sphaericus
C3-41]
Length = 264
Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 102/238 (42%), Positives = 147/238 (61%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
VA S P H+ IIMDGNGRWA R +PR AGH +G++ ++ A+++GIK LT++
Sbjct: 21 VALTKSEPIPAHVAIIMDGNGRWAKKRAMPRVAGHHEGMKTVRKVTRFASDLGIKVLTVY 80
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E+ L++L FL + + N++V +IG+ L L EA
Sbjct: 81 AFSTENWKRPKPEVDFLMRLPVEFLGSFLPEMMERNVRVEMIGDPSLLPAHTQKALYEAM 140
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T+ NTGL L A NY SR E+ A+K + Q ++ G + D+ + +L T+ +P+
Sbjct: 141 EETKHNTGLILNFALNYGSRSEMVNAMKMMLQKVQDGQLTMQDLTEECLTSHLMTAHLPE 200
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDL+IRT GE RLS+F+LWQ+AY+EF F WPDFS E A+ Y R+RR+GGL
Sbjct: 201 PDLLIRTSGEVRLSNFMLWQLAYTEFWFTDTLWPDFSEETLLEAVENYQKRNRRYGGL 258
>gi|21282872|ref|NP_645960.1| undecaprenyl pyrophosphate synthase [Staphylococcus aureus subsp.
aureus MW2]
gi|49483423|ref|YP_040647.1| undecaprenyl pyrophosphate synthase [Staphylococcus aureus subsp.
aureus MRSA252]
gi|49486099|ref|YP_043320.1| undecaprenyl pyrophosphate synthase [Staphylococcus aureus subsp.
aureus MSSA476]
gi|57651830|ref|YP_186136.1| undecaprenyl diphosphate synthase [Staphylococcus aureus subsp.
aureus COL]
gi|87160357|ref|YP_493850.1| undecaprenyl diphosphate synthase [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|88194970|ref|YP_499770.1| undecaprenyl pyrophosphate synthase [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|151221382|ref|YP_001332204.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus subsp.
aureus str. Newman]
gi|161509426|ref|YP_001575085.1| undecaprenyl pyrophosphate synthase [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|257425314|ref|ZP_05601739.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257427975|ref|ZP_05604373.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257430608|ref|ZP_05606990.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus subsp.
aureus 68-397]
gi|257433368|ref|ZP_05609726.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus subsp.
aureus E1410]
gi|257436210|ref|ZP_05612257.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus M876]
gi|258452559|ref|ZP_05700565.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus A5948]
gi|262048152|ref|ZP_06021039.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus D30]
gi|262051322|ref|ZP_06023545.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus
930918-3]
gi|282903815|ref|ZP_06311703.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus C160]
gi|282905578|ref|ZP_06313433.1| di-trans poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus Btn1260]
gi|282908553|ref|ZP_06316383.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus WW2703/97]
gi|282910832|ref|ZP_06318635.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus WBG10049]
gi|282914037|ref|ZP_06321824.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus M899]
gi|282916520|ref|ZP_06324278.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus D139]
gi|282918959|ref|ZP_06326694.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus C427]
gi|282920504|ref|ZP_06328225.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
A9765]
gi|282924082|ref|ZP_06331758.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus C101]
gi|283770324|ref|ZP_06343216.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus subsp.
aureus H19]
gi|283958003|ref|ZP_06375454.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus A017934/97]
gi|284024253|ref|ZP_06378651.1| undecaprenyl pyrophosphate synthase [Staphylococcus aureus subsp.
aureus 132]
gi|293501069|ref|ZP_06666920.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus 58-424]
gi|293510031|ref|ZP_06668739.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus M809]
gi|293526617|ref|ZP_06671302.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus M1015]
gi|294848256|ref|ZP_06789003.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
A9754]
gi|295427747|ref|ZP_06820379.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus EMRSA16]
gi|42559993|sp|Q8NWZ5|UPPS_STAAW RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|73920276|sp|Q5HGH1|UPPS_STAAC RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|73920277|sp|Q6GHH5|UPPS_STAAR RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|73920278|sp|Q6G9V3|UPPS_STAAS RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|21204311|dbj|BAB95008.1| undecaprenyl pyrophosphatase synthetase [Staphylococcus aureus
subsp. aureus MW2]
gi|49241552|emb|CAG40238.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus subsp.
aureus MRSA252]
gi|49244542|emb|CAG42971.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus subsp.
aureus MSSA476]
gi|57286016|gb|AAW38110.1| undecaprenyl diphosphate synthase [Staphylococcus aureus subsp.
aureus COL]
gi|87126331|gb|ABD20845.1| undecaprenyl diphosphate synthase [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|87202528|gb|ABD30338.1| undecaprenyl diphosphate synthase [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|150374182|dbj|BAF67442.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus subsp.
aureus str. Newman]
gi|160368235|gb|ABX29206.1| di-trans, poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus USA300_TCH1516]
gi|257271771|gb|EEV03909.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257274816|gb|EEV06303.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257278736|gb|EEV09355.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus subsp.
aureus 68-397]
gi|257281461|gb|EEV11598.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus subsp.
aureus E1410]
gi|257284492|gb|EEV14612.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus M876]
gi|257859777|gb|EEV82619.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus A5948]
gi|259160697|gb|EEW45718.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus
930918-3]
gi|259163718|gb|EEW48273.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus D30]
gi|282314054|gb|EFB44446.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus C101]
gi|282316769|gb|EFB47143.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus C427]
gi|282319007|gb|EFB49359.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus D139]
gi|282322105|gb|EFB52429.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus M899]
gi|282325437|gb|EFB55746.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus WBG10049]
gi|282327615|gb|EFB57898.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus WW2703/97]
gi|282330870|gb|EFB60384.1| di-trans poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus Btn1260]
gi|282594166|gb|EFB99153.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
A9765]
gi|282595433|gb|EFC00397.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus C160]
gi|283460471|gb|EFC07561.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus subsp.
aureus H19]
gi|283470475|emb|CAQ49686.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus ST398]
gi|283790152|gb|EFC28969.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus A017934/97]
gi|290920689|gb|EFD97752.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus M1015]
gi|291096074|gb|EFE26335.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus 58-424]
gi|291466975|gb|EFF09493.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus M809]
gi|294825056|gb|EFG41478.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
A9754]
gi|295128105|gb|EFG57739.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus EMRSA16]
gi|298694552|gb|ADI97774.1| undecaprenyl diphosphate synthase [Staphylococcus aureus subsp.
aureus ED133]
gi|302332866|gb|ADL23059.1| di-trans, poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus JKD6159]
gi|315194148|gb|EFU24541.1| di-trans, poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus CGS00]
gi|315198502|gb|EFU28831.1| di-trans, poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus CGS01]
gi|323441039|gb|EGA98746.1| undecaprenyl pyrophosphate synthase [Staphylococcus aureus O11]
gi|329727826|gb|EGG64277.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus 21189]
gi|329733651|gb|EGG69979.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus 21193]
Length = 256
Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 103/236 (43%), Positives = 150/236 (63%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
SS+ P+HI IIMDGNGRWA R +PR GH +G++ +I A+++G+K LT++AFS
Sbjct: 21 SSNIPEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITRVASDIGVKYLTLYAFSTE 80
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP SE++ ++ L +FLK L + N+KV IG L + + A+++T
Sbjct: 81 NWSRPESEVNYIMNLPVNFLKTFLPELIEKNVKVETIGFTDKLPKSTIEAINNAKEKTAN 140
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTGL L A NY R E+ +IKN+F ++ + S +D + I +L T D PDP+L+I
Sbjct: 141 NTGLKLIFAINYGGRAELVHSIKNMFDELHQQGLNSDIIDETYINNHLMTKDYPDPELLI 200
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE+R+S+FL+WQV+YSEF+F + WPDF + + Y R RRFGGLS++
Sbjct: 201 RTSGEQRISNFLIWQVSYSEFIFNQKLWPDFDEDELIKCIKIYQSRQRRFGGLSEE 256
>gi|307822434|ref|ZP_07652666.1| undecaprenyl diphosphate synthase [Methylobacter tundripaludum
SV96]
gi|307737000|gb|EFO07845.1| undecaprenyl diphosphate synthase [Methylobacter tundripaludum
SV96]
Length = 262
Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 102/227 (44%), Positives = 144/227 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R +PR GH+ G++ +IV A+ ++ LT+FAFS NWRR
Sbjct: 22 PRHIAIIMDGNGRWAQKRFMPRAIGHQAGVKAVRKIVEYCAKQEVEVLTLFAFSSENWRR 81
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L + L++ L +NNI++R IG+R + D + + E E QT+ N L
Sbjct: 82 PDEEVSLLMGLFMATLQREINKLDRNNIRLRFIGDRTAFSDKLQTKMAEGEAQTKDNNAL 141
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R ++ +A + + I SG + D++ LI +YL T+D+P+PDL IRTGG
Sbjct: 142 TLVIAANYGGRWDLCQAFRTVAGKIASGELKDQDINEQLINQYLSTADLPEPDLFIRTGG 201
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+R+S+FLLWQ+AY+E F WPDF + A+N + R RRFG
Sbjct: 202 EQRVSNFLLWQLAYTELYFTATLWPDFDQNSLEEAINSFKSRQRRFG 248
>gi|153954046|ref|YP_001394811.1| undecaprenyl pyrophosphate synthase [Clostridium kluyveri DSM 555]
gi|146346927|gb|EDK33463.1| UppS1 [Clostridium kluyveri DSM 555]
Length = 254
Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 142/229 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR GH+ G+E EIV + + +K LT++AFS NW+R
Sbjct: 26 PSHIAIIMDGNGRWAKKRNLPRVMGHKAGVEAIREIVKECSNLKVKYLTLYAFSTENWKR 85
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L+ +L++ F L NN+ + IGN L L + T+ NTGL
Sbjct: 86 PKEEVSSLMNLLVEYLRREFKELNDNNVVINYIGNIHKLPSLCEKELITSNKNTKNNTGL 145
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL +A NY RDEI RA K +++DI+SG + ++ ++ YL T ++PDPDLIIR G
Sbjct: 146 NLNLALNYGGRDEIVRAFKLMYEDIKSGKISKDNITEDTLSGYLYTKNMPDPDLIIRPSG 205
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+RLS+FLLWQ AYSEF + WPDF A+ Y RDRRFG +
Sbjct: 206 EQRLSNFLLWQCAYSEFWYSDINWPDFKVWHLHKAILDYQNRDRRFGTV 254
>gi|218710314|ref|YP_002417935.1| undecaprenyl pyrophosphate synthetase [Vibrio splendidus LGP32]
gi|218323333|emb|CAV19510.1| Undecaprenyl pyrophosphate synthetase [Vibrio splendidus LGP32]
Length = 255
Score = 219 bits (559), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 99/231 (42%), Positives = 155/231 (67%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ S P HI IIMDGNGRWA A+G PR GH+ G++ + +++AA +GIK +T+FAFS
Sbjct: 13 TDSLPKHIAIIMDGNGRWAKAQGKPRVFGHKNGVQAVRKTISSAARLGIKAVTLFAFSSE 72
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+ L++L S L L KNN+++RVIG++ ++ + ++EAE T
Sbjct: 73 NWRRPEEEVGLLMELFISVLSSEVKKLHKNNLQLRVIGDKSRFNERLQKKIEEAEALTST 132
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTG+ + IA NY + +I +A+ +I Q ++SG + D+D ++I ++L +D+P+ DL+I
Sbjct: 133 NTGMVINIAANYGGKWDIQQAMTSIAQQVKSGDINVEDIDEAMITQHLTMADIPEVDLLI 192
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE R+S+F+LWQ+AY+E F ++WPDF+ + A+ + R+RRFG
Sbjct: 193 RTSGECRISNFMLWQLAYAEMYFTEQFWPDFNEDSLVEAVTWFVNRERRFG 243
>gi|238926720|ref|ZP_04658480.1| di-trans,poly-cis-decaprenylcistransferase [Selenomonas flueggei
ATCC 43531]
gi|238885252|gb|EEQ48890.1| di-trans,poly-cis-decaprenylcistransferase [Selenomonas flueggei
ATCC 43531]
Length = 269
Score = 219 bits (559), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 102/232 (43%), Positives = 145/232 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I+MDGNGRWA A+G R GH G IV AA+E+GI+ LT++AFS NW+R
Sbjct: 37 PRHVAIVMDGNGRWAKAKGKSRSTGHEAGARTLKRIVRAASEMGIEVLTVYAFSTENWKR 96
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EI L++L +FL + + +++R IG R D +L ++EAE +T NTG+
Sbjct: 97 PHREIDFLLRLFDTFLAREIDEMNAEQVRIRFIGRRDRFSDHLLARMEEAEHRTAQNTGV 156
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ +A NY S+DEI RA++ + +E G + + ++D L + LDT+ P DL IRT G
Sbjct: 157 HFNLAANYGSQDEILRAVRTLAARVEKGELRAEEIDEILFSHTLDTAGDPPVDLFIRTSG 216
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+ RLS+FLLWQ AY+E F +WPDF+ E HA+ + R RRFGGLS +
Sbjct: 217 DLRLSNFLLWQSAYAELYFTETHWPDFTPEELAHAIEDFAGRSRRFGGLSAE 268
>gi|308068690|ref|YP_003870295.1| Undecaprenyl pyrophosphate synthetase (UPP synthetase)
[Paenibacillus polymyxa E681]
gi|305857969|gb|ADM69757.1| Undecaprenyl pyrophosphate synthetase (UPP synthetase)
[Paenibacillus polymyxa E681]
Length = 255
Score = 219 bits (559), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 105/229 (45%), Positives = 144/229 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA G+PR GH+ G++ AA E+GIK LT+FAFS NW R
Sbjct: 26 PQHVAVIMDGNGRWAKRIGMPRIVGHQNGMKAVKRTAIAADELGIKYLTLFAFSTENWTR 85
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L + FL L + N++VR++GN+ L + L EA +T NTGL
Sbjct: 86 PKDEVDFLMRLPQEFLAIELDELIEKNVQVRMMGNKEHLPSHTVEALTEATRRTENNTGL 145
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY SR EI+ ++ + + I G + + D+ S LI L +S +PDPDL+IRT G
Sbjct: 146 VLNFALNYGSRLEITECMQTLGRQIADGKLKTEDITSELIGNTLLSSGMPDPDLLIRTSG 205
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+F+LWQ+AYSE F YWP+F RE + A+ +Y R RR+GGL
Sbjct: 206 ELRLSNFMLWQLAYSELWFTDIYWPEFKREHLYEAVIEYQQRTRRYGGL 254
>gi|187932579|ref|YP_001885460.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum B
str. Eklund 17B]
gi|187720732|gb|ACD21953.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum B
str. Eklund 17B]
Length = 252
Score = 219 bits (559), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 106/230 (46%), Positives = 143/230 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR GH+ G+E +IV + +GIK LT++AFS NW+R
Sbjct: 23 PQHIAIIMDGNGRWAKKRKLPRSMGHKAGVETIRKIVKESKRLGIKYLTLYAFSTENWKR 82
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L+ +LK+ L KN +K+ V+G+ + L +A + T NT +
Sbjct: 83 PKEEVGALMQLLVVYLKREVAELNKNGVKINVLGDMSKFPAECKKELNKAIEITNNNTEI 142
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL +A NY RDE+ RA+K I D+E + D+ LI+ Y+ T +PDPDLIIR G
Sbjct: 143 NLNLALNYGGRDELVRAMKLIIDDLEDDKIKKEDIGEDLISNYIYTKGMPDPDLIIRPSG 202
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E+R+S+FLLWQ AYSEF + WPDF E A+ Y RDRRFGG+
Sbjct: 203 EQRISNFLLWQCAYSEFWYSDIAWPDFKEEDLQKAILDYQNRDRRFGGVK 252
>gi|269797922|ref|YP_003311822.1| undecaprenyl diphosphate synthase [Veillonella parvula DSM 2008]
gi|294793664|ref|ZP_06758801.1| di-trans,poly-cis-decaprenylcistransferase [Veillonella sp. 3_1_44]
gi|269094551|gb|ACZ24542.1| undecaprenyl diphosphate synthase [Veillonella parvula DSM 2008]
gi|294455234|gb|EFG23606.1| di-trans,poly-cis-decaprenylcistransferase [Veillonella sp. 3_1_44]
Length = 254
Score = 219 bits (559), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 101/229 (44%), Positives = 147/229 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG+PR GHR G +V EIV AA E+GI+ LT++ FS NW+R
Sbjct: 22 PQHVAIIMDGNGRWAKRRGMPRSMGHRAGADVLKEIVMAADEIGIRALTVYGFSTENWKR 81
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ LIK +L + ++N+++R IG L +++ ++++AE T+ NTGL
Sbjct: 82 PEQEVSLLMSLIKEYLNNNVKYMHEHNVRIRFIGFIGGLSENLQKIIQDAELLTQNNTGL 141
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY RDEI R I++I + + G + + ++ L T + D DL+IR
Sbjct: 142 TLQLAINYGGRDEIVRTIRDIVKSVADGVITMDKITEEYVSSQLFTKEFSDVDLLIRPSS 201
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+ R+S+FLLWQ+AY+EF F +WPDF++E A+ Y R+RRFGGL
Sbjct: 202 DFRISNFLLWQLAYAEFWFTDLHWPDFTKETLLEAVAAYQKRERRFGGL 250
>gi|86146885|ref|ZP_01065204.1| undecaprenyl diphosphate synthase [Vibrio sp. MED222]
gi|85835337|gb|EAQ53476.1| undecaprenyl diphosphate synthase [Vibrio sp. MED222]
Length = 250
Score = 219 bits (559), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 99/231 (42%), Positives = 155/231 (67%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ S P HI IIMDGNGRWA A+G PR GH+ G++ + +++AA +GIK +T+FAFS
Sbjct: 8 TDSLPKHIAIIMDGNGRWAKAQGKPRVFGHKNGVQAVRKTISSAARLGIKAVTLFAFSSE 67
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+ L++L S L L KNN+++RVIG++ ++ + ++EAE T
Sbjct: 68 NWRRPEEEVGLLMELFISVLSSEVKKLHKNNLQLRVIGDKSRFNERLQKKIEEAEALTST 127
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTG+ + IA NY + +I +A+ +I Q ++SG + D+D ++I ++L +D+P+ DL+I
Sbjct: 128 NTGMVINIAANYGGKWDIQQAMTSIAQQVKSGDINVEDIDEAMITQHLTMADIPEVDLLI 187
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE R+S+F+LWQ+AY+E F ++WPDF+ + A+ + R+RRFG
Sbjct: 188 RTSGECRISNFMLWQLAYAEMYFTEQFWPDFNEDSLVEAVTWFVNRERRFG 238
>gi|253731879|ref|ZP_04866044.1| Di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus USA300_TCH959]
gi|253733502|ref|ZP_04867667.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus TCH130]
gi|253724289|gb|EES93018.1| Di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus USA300_TCH959]
gi|253728556|gb|EES97285.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus TCH130]
Length = 267
Score = 219 bits (559), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 103/236 (43%), Positives = 150/236 (63%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
SS+ P+HI IIMDGNGRWA R +PR GH +G++ +I A+++G+K LT++AFS
Sbjct: 32 SSNIPEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITRIASDIGVKYLTLYAFSTE 91
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP SE++ ++ L +FLK L + N+KV IG L + + A+++T
Sbjct: 92 NWSRPESEVNYIMNLPVNFLKTFLPELIEKNVKVETIGFTDKLPKSTIEAINNAKEKTAN 151
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTGL L A NY R E+ +IKN+F ++ + S +D + I +L T D PDP+L+I
Sbjct: 152 NTGLKLIFAINYGGRAELVHSIKNMFDELHQQGLNSDIIDETYINNHLMTKDYPDPELLI 211
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE+R+S+FL+WQV+YSEF+F + WPDF + + Y R RRFGGLS++
Sbjct: 212 RTSGEQRISNFLIWQVSYSEFIFNQKLWPDFDEDELIKCIKIYQSRQRRFGGLSEE 267
>gi|219854659|ref|YP_002471781.1| hypothetical protein CKR_1316 [Clostridium kluyveri NBRC 12016]
gi|219568383|dbj|BAH06367.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 260
Score = 219 bits (559), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 142/229 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR GH+ G+E EIV + + +K LT++AFS NW+R
Sbjct: 32 PSHIAIIMDGNGRWAKKRNLPRVMGHKAGVEAIREIVKECSNLKVKYLTLYAFSTENWKR 91
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L+ +L++ F L NN+ + IGN L L + T+ NTGL
Sbjct: 92 PKEEVSSLMNLLVEYLRREFKELNDNNVVINYIGNIHKLPSLCEKELITSNKNTKNNTGL 151
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL +A NY RDEI RA K +++DI+SG + ++ ++ YL T ++PDPDLIIR G
Sbjct: 152 NLNLALNYGGRDEIVRAFKLMYEDIKSGKISKDNITEDTLSGYLYTKNMPDPDLIIRPSG 211
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+RLS+FLLWQ AYSEF + WPDF A+ Y RDRRFG +
Sbjct: 212 EQRLSNFLLWQCAYSEFWYSDINWPDFKVWHLHKAILDYQNRDRRFGTV 260
>gi|225867812|ref|YP_002743760.1| undecaprenyl pyrophosphate synthetase [Streptococcus equi subsp.
zooepidemicus]
gi|225871278|ref|YP_002747225.1| undecaprenyl pyrophosphate synthetase [Streptococcus equi subsp.
equi 4047]
gi|225700682|emb|CAW95274.1| undecaprenyl pyrophosphate synthetase [Streptococcus equi subsp.
equi 4047]
gi|225701088|emb|CAW97919.1| undecaprenyl pyrophosphate synthetase [Streptococcus equi subsp.
zooepidemicus]
Length = 249
Score = 219 bits (559), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/233 (48%), Positives = 140/233 (60%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA R PR GH+ G++ E+ AA+++G+K LT++AFS NW R
Sbjct: 17 PKHIGIIMDGNGRWAKKRLKPRVFGHKAGMDALQEVTIAASDLGVKVLTVYAFSTENWSR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S ++ L F K L KNN+KV++IG L D L L+ A +TR NTGL
Sbjct: 77 PQDEVSFIMNLPVEFFDKYVPELHKNNVKVQMIGETNRLPKDTLKALEAAIAKTRQNTGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI+ A+ I QD+ + D+ LIA YL T +P DPDLII
Sbjct: 137 ILNFALNYGGRAEITNAVGLIAQDVLDAKLNPGDITEDLIANYLMTDHLPYLYRDPDLII 196
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+F+ WQ AYSE F P WPDF R A+ YN R RRFG +
Sbjct: 197 RTSGELRLSNFMPWQSAYSELYFTPVLWPDFKRAELLKAIEDYNHRHRRFGAI 249
>gi|116333951|ref|YP_795478.1| undecaprenyl pyrophosphate synthase [Lactobacillus brevis ATCC 367]
gi|116099298|gb|ABJ64447.1| Undecaprenyl pyrophosphate synthetase [Lactobacillus brevis ATCC
367]
Length = 262
Score = 219 bits (559), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 105/233 (45%), Positives = 151/233 (64%), Gaps = 3/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH++G+ + AA+ +G+K LT++AFS NW+R
Sbjct: 25 PAHIAIIMDGNGRWAQQRHLPRIAGHKQGMNTVKTVAKAASHLGVKVLTLYAFSTENWKR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E++ L+KL F L KNNI+V+V+G L + +A TR TG+
Sbjct: 85 PNAEVNYLMKLPVDFFGTFVPDLIKNNIRVKVMGYTDQLPAATQKAVADAIADTRHCTGM 144
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP---DPDLIIR 187
L A NY R E+ A++++ Q ++SG + ++D +++ + L T+D+ DPDL+IR
Sbjct: 145 VLNFALNYGGRAELVTAVQHVAQQVQSGQLDPAEIDETMLDRQLMTADLGELRDPDLLIR 204
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
T GEKRLS+F+LWQVAYSEFVF+ E+WPDF + A+ +Y R RR+GGL+
Sbjct: 205 TSGEKRLSNFMLWQVAYSEFVFMQEHWPDFDQTALETAIYEYQQRHRRYGGLT 257
>gi|323443908|gb|EGB01519.1| undecaprenyl pyrophosphate synthase [Staphylococcus aureus O46]
Length = 256
Score = 219 bits (559), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 103/236 (43%), Positives = 150/236 (63%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
SS+ P+HI IIMDGNGRWA R +PR GH +G++ +I A+++G+K LT++AFS
Sbjct: 21 SSNIPEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITRVASDIGVKYLTLYAFSTE 80
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP SE++ ++ L +FLK L + N+KV IG L + + A+++T
Sbjct: 81 NWSRPESEVNYIMNLPVNFLKTFLPELIEKNVKVETIGFTDKLPKSTIEAINNAKEKTAN 140
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTGL L A NY R E+ +IKN+F ++ + S +D + I +L T D PDP+L+I
Sbjct: 141 NTGLKLIFAINYGGRAELVHSIKNMFDELHQQGLNSDFIDETYINNHLMTKDYPDPELLI 200
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE+R+S+FL+WQV+YSEF+F + WPDF + + Y R RRFGGLS++
Sbjct: 201 RTSGEQRISNFLIWQVSYSEFIFNQKLWPDFDEDELIKCIKIYQSRQRRFGGLSEE 256
>gi|260892484|ref|YP_003238581.1| undecaprenyl diphosphate synthase [Ammonifex degensii KC4]
gi|260864625|gb|ACX51731.1| undecaprenyl diphosphate synthase [Ammonifex degensii KC4]
Length = 264
Score = 219 bits (558), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 102/239 (42%), Positives = 147/239 (61%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++A + + P H+ +IMDGNGRWAA RGLPR AGH+ GIE +V E+GI L+
Sbjct: 23 LLALIRPEALPRHVAVIMDGNGRWAAQRGLPRSAGHQAGIETLRRVVELCGELGIPILSA 82
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NWRRP E++ L+ L + + L++ ++V+VIG R L +L +
Sbjct: 83 YAFSTENWRRPPEEVNFLMNLFVEYAAREIEELREKGVRVKVIGCRSELPPAVLAAAERL 142
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E +T L L +A NY +R EI A++ I + + +G + ++D +A +L T+ +P
Sbjct: 143 ERETAQGERLLLNLAVNYGARREIVDAVRAIARKVRAGELEPEEIDEDTVAAHLYTAGLP 202
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IR GE R+S+FLLWQ+AY+E P +WPDFSR F AL Y R+RRFGGL
Sbjct: 203 DPDLLIRPAGEMRVSNFLLWQLAYTELYVTPVFWPDFSRVDFLQALVAYQRRERRFGGL 261
>gi|315222085|ref|ZP_07863995.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus anginosus
F0211]
gi|315188835|gb|EFU22540.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus anginosus
F0211]
Length = 249
Score = 219 bits (558), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/233 (46%), Positives = 144/233 (61%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA R PR GH+ G+E + AA E+G++ LT++AFS NW R
Sbjct: 17 PKHIGIIMDGNGRWAKKRMQPRVFGHKSGMETLQNVTIAAKELGVQVLTVYAFSTENWSR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S ++ L F + L +NN+K+++IG+ L L +AE+ TRLNTGL
Sbjct: 77 PEKEVSFIMNLPVEFYDRYVPELHRNNVKIQMIGDTERLPKATYEALYKAEELTRLNTGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI +A+K I QD+ ++D +IA YL TS++P DPDL+I
Sbjct: 137 ILNFALNYGGRAEIVQAVKMIAQDVLDAKFSPGEIDEEMIANYLQTSNLPRLLRDPDLVI 196
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSE F WPDF + A+ +Y+ R+RRFGG+
Sbjct: 197 RTSGELRLSNFLPWQSAYSELYFTDILWPDFDEKALKAAIEEYSKRNRRFGGV 249
>gi|310641585|ref|YP_003946343.1| di-trans,poly-cis-decaprenylcistransferase [Paenibacillus polymyxa
SC2]
gi|309246535|gb|ADO56102.1| Di-trans,poly-cis-decaprenylcistransferase [Paenibacillus polymyxa
SC2]
Length = 255
Score = 219 bits (558), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 105/229 (45%), Positives = 144/229 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA G+PR GH+ G++ AA E+GIK LT+FAFS NW R
Sbjct: 26 PQHVAVIMDGNGRWAKRIGMPRIVGHQNGMKAVKRTAIAADELGIKYLTLFAFSTENWTR 85
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL + FL L + N++VR++GN+ L + L EA +T NTGL
Sbjct: 86 PKDEVDFLMKLPQEFLAIELDELIEKNVQVRMMGNKEHLPSHTVEALTEATRRTENNTGL 145
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY SR EI+ ++ + + IE G + D+ S LI L ++ +PDPDL+IRT G
Sbjct: 146 VLNFALNYGSRLEITECMQALGRQIEDGKLKPEDITSELIGNTLLSTGMPDPDLLIRTSG 205
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+F+LWQ+AYSE F YWP+F +E + A+ +Y R RR+GGL
Sbjct: 206 ELRLSNFMLWQLAYSELWFTDIYWPEFKKEHLYEAVIEYQKRSRRYGGL 254
>gi|302874653|ref|YP_003843286.1| undecaprenyl diphosphate synthase [Clostridium cellulovorans 743B]
gi|307690734|ref|ZP_07633180.1| undecaprenyl diphosphate synthase [Clostridium cellulovorans 743B]
gi|302577510|gb|ADL51522.1| undecaprenyl diphosphate synthase [Clostridium cellulovorans 743B]
Length = 252
Score = 219 bits (558), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/231 (46%), Positives = 150/231 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA + LPR AGH+ G E EI +++G+K LT++AFS NW+R
Sbjct: 22 PEHIAIIMDGNGRWAQGKKLPRSAGHKAGAENVREITKECSKLGVKYLTLYAFSTENWKR 81
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E++ L+KL+ FL K L +N + VR +G+ L ++ L+EA ++T+ NTG+
Sbjct: 82 SNEEVNILMKLMVEFLNKEIDELHENQVVVRCLGDITKLPEECRKTLEEAYERTKDNTGI 141
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL +A NY RDEI +A++ I +D+ +D + KYL T+ +PDPDLIIR G
Sbjct: 142 NLNLAINYGGRDEILKAVRLIAKDVLESKSNIETLDIGDVEKYLYTAGMPDPDLIIRPSG 201
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
EKR+S+FLLWQ AYSEF + WPDF+R A+ Y RDRRFGG++K
Sbjct: 202 EKRISNFLLWQCAYSEFWYSNINWPDFNRNNLQEAILDYQDRDRRFGGINK 252
>gi|195978864|ref|YP_002124108.1| undecaprenyl pyrophosphate synthetase UppS [Streptococcus equi
subsp. zooepidemicus MGCS10565]
gi|195975569|gb|ACG63095.1| undecaprenyl pyrophosphate synthetase UppS [Streptococcus equi
subsp. zooepidemicus MGCS10565]
Length = 249
Score = 219 bits (558), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/233 (48%), Positives = 140/233 (60%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA R PR GH+ G++ E+ AA+++G+K LT++AFS NW R
Sbjct: 17 PKHIGIIMDGNGRWAKKRLKPRVFGHKAGMDALQEVTIAASDLGVKVLTVYAFSTENWSR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S ++ L F K L KNN+KV++IG L D L L+ A +TR NTGL
Sbjct: 77 PQDEVSFIMNLPVEFFDKYVPELHKNNVKVQMIGETNRLPKDTLKALEAAIAKTRQNTGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI+ A+ I QD+ + D+ LIA YL T +P DPDLII
Sbjct: 137 ILNFALNYGGRAEITNAVGLIAQDVLDAKLNPGDITEDLIANYLMTDHLPYLYRDPDLII 196
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+F+ WQ AYSE F P WPDF R A+ YN R RRFG +
Sbjct: 197 RTSGELRLSNFMPWQSAYSELYFTPVLWPDFKRAELIKAIEDYNHRHRRFGAI 249
>gi|332799212|ref|YP_004460711.1| Undecaprenyl pyrophosphate synthase [Tepidanaerobacter sp. Re1]
gi|332696947|gb|AEE91404.1| Undecaprenyl pyrophosphate synthase [Tepidanaerobacter sp. Re1]
Length = 252
Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 108/243 (44%), Positives = 150/243 (61%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M+ + + P HI IIMDGNGRWA ++ LPR AGH G E IV+ +++ I+ LT+
Sbjct: 9 MLEKLKMHNMPKHIAIIMDGNGRWAESKSLPRIAGHWAGAETLKNIVSTCSKLKIQILTV 68
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW+RP E++ L+ L+ +LKK L +NNI++ V G+ L D + +K++
Sbjct: 69 FAFSSENWKRPAEEVNSLMNLLLYYLKKEVEELHRNNIRIIVTGDWEELPDKVAKQIKKS 128
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
T+ N+GL L IA NY +R EI A KNI D+ G + +D KYL T D+P
Sbjct: 129 IIITQNNSGLVLNIALNYGARKEILLACKNICSDVLKGDLIIDKIDEERFNKYLYTHDLP 188
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IR GE R+S+FLLWQ+AY+E F +WP+F E A+ Y R+RRFGGL
Sbjct: 189 DPDLLIRPSGELRISNFLLWQIAYTELWFTEIFWPEFKPEDLLKAIYDYQARERRFGGLK 248
Query: 241 KKG 243
K+
Sbjct: 249 KQS 251
>gi|332881255|ref|ZP_08448905.1| di-trans,poly-cis-decaprenylcistransferase [Capnocytophaga sp. oral
taxon 329 str. F0087]
gi|332680631|gb|EGJ53578.1| di-trans,poly-cis-decaprenylcistransferase [Capnocytophaga sp. oral
taxon 329 str. F0087]
Length = 246
Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 149/232 (64%), Gaps = 2/232 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA A+GLPR AGH++G+E +I A +G+K LT++ FS NW R
Sbjct: 13 PRHVAIIMDGNGRWAKAKGLPRTAGHQEGVETVKKITEEAVRLGVKYLTLYTFSTENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
PV EI+ L+ LI L+ + KNN++ RVIG+ + + + L+E T N +
Sbjct: 73 PVPEIAALMGLILDHLEDEIF--MKNNVRFRVIGDMSRIPEVVRVRLEECMQHTAANEKM 130
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ IA +YSSR E+++A++ I +++++G++ + I +L T +PDPDL+IRTGG
Sbjct: 131 TMVIALSYSSRWELAQAMRQIAEEVQAGALLPSQITEETIEAHLVTRFMPDPDLLIRTGG 190
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S++LLWQ AY+EF F YWPDF F A+ Y R+RRFG S++
Sbjct: 191 EYRISNYLLWQCAYTEFYFCDTYWPDFDENEFRKAIADYQSRERRFGKTSEQ 242
>gi|312883812|ref|ZP_07743531.1| undecaprenyl pyrophosphate synthetase [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309368561|gb|EFP96094.1| undecaprenyl pyrophosphate synthetase [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 251
Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 104/232 (44%), Positives = 152/232 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA A+G R GHRKG+ + + +A++GIK LT+FAFS NW+R
Sbjct: 12 PKHIAIIMDGNGRWAKAQGKSRVFGHRKGVSAVRKTITMSAKLGIKALTLFAFSSENWQR 71
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
PV E+ L++L S L L KNNI++ ++G+ + + AE+ TR N GL
Sbjct: 72 PVEEVGVLMELFISVLSTEIKKLHKNNIRLCIVGDISRFSKSLQSKILHAENLTRNNDGL 131
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ IA NY R +I++A+KNI + +E+GS+ S D+ LI +L +D+P+ DL+IRT G
Sbjct: 132 VVNIAANYGGRWDITQAVKNITEKVENGSMKSEDISEELIQSHLTMADLPEVDLMIRTSG 191
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+F+LWQ+AY+E F P +WPDF+ + A++ Y R+RRFG S++
Sbjct: 192 ECRISNFMLWQMAYAEMYFTPIFWPDFNEDCLVEAIDWYLNRERRFGCTSEQ 243
>gi|308173616|ref|YP_003920321.1| undecaprenyl pyrophosphate synthase [Bacillus amyloliquefaciens DSM
7]
gi|307606480|emb|CBI42851.1| undecaprenyl pyrophosphate synthase [Bacillus amyloliquefaciens DSM
7]
gi|328553452|gb|AEB23944.1| undecaprenyl pyrophosphate synthase [Bacillus amyloliquefaciens
TA208]
gi|328911757|gb|AEB63353.1| undecaprenyl pyrophosphate synthase [Bacillus amyloliquefaciens
LL3]
Length = 260
Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 103/235 (43%), Positives = 148/235 (62%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
++ P HI IIMDGNGRWA R LPR AGH +G++V + A ++G+K LT++AFS
Sbjct: 26 ILKGEIPAHIAIIMDGNGRWAKKRSLPRIAGHHEGMKVVKRVTKLANQLGVKVLTLYAFS 85
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+ L+KL + FL L + N++V++IG+ +L +++A T
Sbjct: 86 TENWKRPKMEVDFLMKLPEEFLNTYLPELIEENVRVKIIGDESALPSHTYKAIEKAVKDT 145
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N GL L A NY R EI A K + + ++SG++ D+D +L +K+L T + DP+L
Sbjct: 146 EQNDGLILNFALNYGGRTEIVNAAKALAEQVKSGTLNIEDIDEALFSKHLMTESIQDPEL 205
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE RLS+F+LWQVAYSEFVF WPDF + F A+ ++ R RRFGG+
Sbjct: 206 LIRTSGEIRLSNFMLWQVAYSEFVFTDVLWPDFKEDHFLKAVGEFQQRGRRFGGI 260
>gi|299142364|ref|ZP_07035496.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella oris C735]
gi|298576086|gb|EFI47960.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella oris C735]
Length = 247
Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 102/237 (43%), Positives = 152/237 (64%), Gaps = 2/237 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M AS+ + P HI IIMDGNGRWA+ +G PR GH+ G++ I + A +G+K LT+
Sbjct: 1 MTASLDMTRIPKHIAIIMDGNGRWASEKGKPRSYGHQAGVDAVRRITSEATRLGVKFLTL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW RP EIS L+ L+ + L+ + KNN++ RVIG+R L ++ L+E
Sbjct: 61 YTFSTENWNRPADEISALMGLVLTSLEDEIF--MKNNVRFRVIGDRKRLPAEVEQKLRET 118
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E+ T+ NT + + +A +YS+R EI +A++NI + + D+ +I+ +L+T+ +P
Sbjct: 119 EEHTKGNTAMTMVVALSYSARWEIVQAMRNILIENTDKPLQPTDITEEMISHHLETNFMP 178
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DP+L+IRTGGE R+S++LLWQ+AYSE F YWPDFS + A+ Y R RRFG
Sbjct: 179 DPELLIRTGGELRISNYLLWQIAYSELYFCDTYWPDFSEDDLQKAIQSYQNRQRRFG 235
>gi|270290320|ref|ZP_06196545.1| di-trans,poly-cis-decaprenylcistransferase [Pediococcus
acidilactici 7_4]
gi|304384861|ref|ZP_07367207.1| di-trans,poly-cis-decaprenylcistransferase [Pediococcus
acidilactici DSM 20284]
gi|270281101|gb|EFA26934.1| di-trans,poly-cis-decaprenylcistransferase [Pediococcus
acidilactici 7_4]
gi|304329055|gb|EFL96275.1| di-trans,poly-cis-decaprenylcistransferase [Pediococcus
acidilactici DSM 20284]
Length = 249
Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 104/234 (44%), Positives = 146/234 (62%), Gaps = 3/234 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA R +PR AGH++G+EV I AA+ +G+K LT++AFS NW+R
Sbjct: 16 PNHVAIIMDGNGRWAQRRFMPRVAGHKRGMEVVKTITKAASSLGVKVLTLYAFSTENWKR 75
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+KL +F L + ++V+V GN L + A T T +
Sbjct: 76 PQDEVSFLMKLPITFFDTFVPELIEQGVRVKVTGNIEGLPQATQDAVNRAISDTAHGTKM 135
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS---DVPDPDLIIR 187
L A NY SRDE+++ ++I Q + +G + +D LIA+ L TS D+ DPDL+IR
Sbjct: 136 ILNFALNYGSRDELTQMTRSIAQQVANGEIVPEAIDEQLIARNLQTSFLGDLADPDLLIR 195
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
T GE+R+S+FLLWQ+AYSE VF WPDF+ + F + +Y RDRRFG + K
Sbjct: 196 TSGEERISNFLLWQIAYSELVFTDTLWPDFNEQTFMEMIKEYQKRDRRFGAIKK 249
>gi|77463258|ref|YP_352762.1| undecaprenyl pyrophosphate synthetase [Rhodobacter sphaeroides
2.4.1]
gi|126462132|ref|YP_001043246.1| undecaprenyl diphosphate synthase [Rhodobacter sphaeroides ATCC
17029]
gi|332558136|ref|ZP_08412458.1| undecaprenyl diphosphate synthase [Rhodobacter sphaeroides WS8N]
gi|77387676|gb|ABA78861.1| Undecaprenyl pyrophosphate synthetase [Rhodobacter sphaeroides
2.4.1]
gi|126103796|gb|ABN76474.1| Undecaprenyl pyrophosphate synthetase [Rhodobacter sphaeroides ATCC
17029]
gi|332275848|gb|EGJ21163.1| undecaprenyl diphosphate synthase [Rhodobacter sphaeroides WS8N]
Length = 247
Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 101/242 (41%), Positives = 149/242 (61%), Gaps = 4/242 (1%)
Query: 2 VASMMSSSPP----DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKN 57
V + PP DH+ IIMDGNGRWA RG PR GHR+G E EIV A+ +GI+
Sbjct: 3 VTEPREADPPPRRADHVAIIMDGNGRWAVDRGWPRLVGHRRGAERVREIVQASPGLGIRW 62
Query: 58 LTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
LT++AFS NW+R E+ L+ + ++++ L K I++R IG+R LD + ++
Sbjct: 63 LTVYAFSTENWKRSTEEVLGLMSIFARYIEREADRLAKEGIRMRFIGDRTRLDPKLQRLM 122
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
E +T+ N LNL +A NY RDE++RA + + QD+ +G + + + D + + LDT+
Sbjct: 123 AGIETRTQYNQRLNLTVAINYGGRDELARAARRMCQDVAAGHLRAEEADEAALVARLDTA 182
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+PDPDL+IRT GE R S+FL WQ AY+E+ F P WPDF+ + ++ R+RRFG
Sbjct: 183 GMPDPDLVIRTSGETRTSNFLSWQSAYAEYEFTPTLWPDFTARELETIIGRFAARERRFG 242
Query: 238 GL 239
G+
Sbjct: 243 GV 244
>gi|15924250|ref|NP_371784.1| undecaprenyl pyrophosphatase synthetase [Staphylococcus aureus
subsp. aureus Mu50]
gi|15926843|ref|NP_374376.1| undecaprenyl pyrophosphate synthase [Staphylococcus aureus subsp.
aureus N315]
gi|148267750|ref|YP_001246693.1| undecaprenyl pyrophosphate synthase [Staphylococcus aureus subsp.
aureus JH9]
gi|150393809|ref|YP_001316484.1| undecaprenyl pyrophosphate synthase [Staphylococcus aureus subsp.
aureus JH1]
gi|156979581|ref|YP_001441840.1| undecaprenyl pyrophosphatase synthetase [Staphylococcus aureus
subsp. aureus Mu3]
gi|253315616|ref|ZP_04838829.1| undecaprenyl pyrophosphatase synthetase [Staphylococcus aureus
subsp. aureus str. CF-Marseille]
gi|255006047|ref|ZP_05144648.2| undecaprenyl pyrophosphatase synthetase [Staphylococcus aureus
subsp. aureus Mu50-omega]
gi|257795684|ref|ZP_05644663.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
A9781]
gi|258416087|ref|ZP_05682355.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus A9763]
gi|258421670|ref|ZP_05684594.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
A9719]
gi|258434826|ref|ZP_05688900.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus A9299]
gi|258444598|ref|ZP_05692927.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus A8115]
gi|258447569|ref|ZP_05695713.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus A6300]
gi|258449411|ref|ZP_05697514.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus A6224]
gi|258454790|ref|ZP_05702754.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus A5937]
gi|269202877|ref|YP_003282146.1| undecaprenyl diphosphate synthase [Staphylococcus aureus subsp.
aureus ED98]
gi|282892748|ref|ZP_06300983.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
A8117]
gi|282927602|ref|ZP_06335218.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
A10102]
gi|295406197|ref|ZP_06816004.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
A8819]
gi|296274818|ref|ZP_06857325.1| undecaprenyl pyrophosphate synthase [Staphylococcus aureus subsp.
aureus MR1]
gi|297244425|ref|ZP_06928308.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
A8796]
gi|42559923|sp|P60476|UPPS_STAAM RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|42559924|sp|P60477|UPPS_STAAN RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|13701060|dbj|BAB42355.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus subsp.
aureus N315]
gi|14247030|dbj|BAB57422.1| undecaprenyl pyrophosphatase synthetase [Staphylococcus aureus
subsp. aureus Mu50]
gi|147740819|gb|ABQ49117.1| Undecaprenyl pyrophosphate synthetase [Staphylococcus aureus subsp.
aureus JH9]
gi|149946261|gb|ABR52197.1| undecaprenyl diphosphate synthase [Staphylococcus aureus subsp.
aureus JH1]
gi|156721716|dbj|BAF78133.1| undecaprenyl pyrophosphatase synthetase [Staphylococcus aureus
subsp. aureus Mu3]
gi|257789656|gb|EEV27996.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
A9781]
gi|257839235|gb|EEV63711.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus A9763]
gi|257842356|gb|EEV66781.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
A9719]
gi|257849187|gb|EEV73169.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus A9299]
gi|257850091|gb|EEV74044.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus A8115]
gi|257853760|gb|EEV76719.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus A6300]
gi|257857399|gb|EEV80297.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus A6224]
gi|257863173|gb|EEV85937.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus A5937]
gi|262075167|gb|ACY11140.1| undecaprenyl diphosphate synthase [Staphylococcus aureus subsp.
aureus ED98]
gi|282590605|gb|EFB95682.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
A10102]
gi|282764745|gb|EFC04870.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
A8117]
gi|285816942|gb|ADC37429.1| Undecaprenyl pyrophosphate synthetase [Staphylococcus aureus
04-02981]
gi|294968785|gb|EFG44807.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
A8819]
gi|297178455|gb|EFH37701.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
A8796]
gi|312829654|emb|CBX34496.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus ECT-R 2]
gi|315131054|gb|EFT87038.1| undecaprenyl pyrophosphatase synthetase [Staphylococcus aureus
subsp. aureus CGS03]
gi|329727600|gb|EGG64056.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus 21172]
Length = 256
Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 103/236 (43%), Positives = 150/236 (63%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
SS+ P+HI IIMDGNGRWA R +PR GH +G++ +I A+++G+K LT++AFS
Sbjct: 21 SSNIPEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITRIASDIGVKYLTLYAFSTE 80
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP SE++ ++ L +FLK L + N+KV IG L + + A+++T
Sbjct: 81 NWSRPESEVNYIMNLPVNFLKTFLPELIEKNVKVETIGFTDKLPKSTIEAINNAKEKTAN 140
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTGL L A NY R E+ +IKN+F ++ + S +D + I +L T D PDP+L+I
Sbjct: 141 NTGLKLIFAINYGGRAELVHSIKNMFDELHQQGLNSDIIDETYINNHLMTKDYPDPELLI 200
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE+R+S+FL+WQV+YSEF+F + WPDF + + Y R RRFGGLS++
Sbjct: 201 RTSGEQRISNFLIWQVSYSEFIFNQKLWPDFDEDELIKCIKIYQSRQRRFGGLSEE 256
>gi|303240824|ref|ZP_07327337.1| undecaprenyl diphosphate synthase [Acetivibrio cellulolyticus CD2]
gi|302591712|gb|EFL61447.1| undecaprenyl diphosphate synthase [Acetivibrio cellulolyticus CD2]
Length = 254
Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 101/229 (44%), Positives = 144/229 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR GH++G + I E+GIK LT++AFS NW+R
Sbjct: 26 PVHIAIIMDGNGRWAKERRLPRTVGHKEGSNNLDRIAHFCGEIGIKYLTVYAFSTENWKR 85
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE+ L+ L+ +LK ++ ++++R IG+ +L +I + T N+GL
Sbjct: 86 PKSEVDTLMDLLLDYLKNAESHMRGRSVRIRTIGDSSALSKEIQEQIVRVTKLTENNSGL 145
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY RDEI A+K + +D+ G + ++D ++I L T D+PDPDL+IR GG
Sbjct: 146 TLNIAINYGGRDEIVHAVKELARDVAEGKIKCDNIDETMITNRLYTGDMPDPDLLIRPGG 205
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
EKR+S+FL+WQ AY+EF + WPDF +E A+ +Y R+RRFGG+
Sbjct: 206 EKRISNFLIWQSAYTEFWYTDVLWPDFQKEHILEAIKEYQKRNRRFGGV 254
>gi|260583920|ref|ZP_05851668.1| di-trans,poly-cis-decaprenylcistransferase [Granulicatella elegans
ATCC 700633]
gi|260158546|gb|EEW93614.1| di-trans,poly-cis-decaprenylcistransferase [Granulicatella elegans
ATCC 700633]
Length = 265
Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 104/232 (44%), Positives = 151/232 (65%), Gaps = 3/232 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA +R LPR AGH++G+ I AA E+G+K +T++AFS NW+R
Sbjct: 33 PQHIAVIMDGNGRWAKSRNLPRIAGHKEGMSTVKRIAIAADELGVKAMTMYAFSTENWKR 92
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+KL F L++ N+++R+IG L + V+++A + T+ NTG+
Sbjct: 93 PTEEVSFLMKLPGDFFSSFMPELQERNMRIRLIGFTDQLPEATRRVVEKAVEDTKDNTGM 152
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS---DVPDPDLIIR 187
L A NY SR EI +A+K I D+ +G + ++ + A +L T+ D+ +PDL+IR
Sbjct: 153 TLCFALNYGSRAEILQAVKEIAVDVSNGKYDAESINEEVFANHLQTNFLGDLSEPDLMIR 212
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
T GE+RLS+FLLWQ+AYSE+ F +WPDFS+E A+ Y R RR+GGL
Sbjct: 213 TSGEQRLSNFLLWQLAYSEYYFTDIFWPDFSKEDLEEAILTYQKRQRRYGGL 264
>gi|292670558|ref|ZP_06603984.1| di-trans,poly-cis-decaprenylcistransferase [Selenomonas noxia ATCC
43541]
gi|292647724|gb|EFF65696.1| di-trans,poly-cis-decaprenylcistransferase [Selenomonas noxia ATCC
43541]
Length = 275
Score = 219 bits (557), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 104/236 (44%), Positives = 147/236 (62%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+S P H+ I+MDGNGRWA A+G R AGH G IV AA+++GI+ LT++AFS N
Sbjct: 40 TSMPRHVAIVMDGNGRWAKAQGRSRSAGHEAGAHTLKRIVRAASDMGIEVLTVYAFSTEN 99
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W+RP E+ L+ L SFL K + N+++ IG R D L ++EAE++T N
Sbjct: 100 WKRPKIEVDFLLNLFDSFLTKEIAEMHAENVRISFIGRRDRFTDRFLRRMQEAEERTADN 159
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
TG++ +A NY S+DEI RA + + + +G + + ++D + + LDT+ P DL IR
Sbjct: 160 TGIHFNLAANYGSQDEILRAARTLAERAAAGEITAEEIDEEIFSHALDTAGDPPVDLFIR 219
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
T G+ RLS+FLLWQ AY+E F YWPDF+ E F A+ + R RRFGGLS +G
Sbjct: 220 TSGDLRLSNFLLWQSAYAELYFTDTYWPDFTPEEFARAIEDFAGRSRRFGGLSAEG 275
>gi|82750861|ref|YP_416602.1| undecaprenyl pyrophosphate synthase [Staphylococcus aureus RF122]
gi|82656392|emb|CAI80811.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus RF122]
Length = 256
Score = 219 bits (557), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 103/236 (43%), Positives = 149/236 (63%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
SS+ P+HI IIMDGNGRWA R +PR GH +G++ +I A+++G+K LT++AFS
Sbjct: 21 SSNIPEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITRVASDIGVKYLTLYAFSTE 80
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP SE++ ++ L +FLK L + N+KV IG L + + A+ +T
Sbjct: 81 NWSRPESEVNYIMNLPVNFLKTFLSELIEKNVKVETIGFTDKLPKSTIEAINNAKAKTAN 140
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTGL L A NY R E+ +IKN+F ++ + S +D + I +L T D PDP+L+I
Sbjct: 141 NTGLKLIFAINYGGRAELVHSIKNMFDELHQQGLNSDIIDETYINNHLMTKDYPDPELLI 200
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE+R+S+FL+WQV+YSEF+F + WPDF + + Y R RRFGGLS++
Sbjct: 201 RTSGEQRISNFLIWQVSYSEFIFNQKLWPDFDEDELIKCIKIYQSRQRRFGGLSEE 256
>gi|299534750|ref|ZP_07048080.1| undecaprenyl pyrophosphate synthetase [Lysinibacillus fusiformis
ZC1]
gi|298729838|gb|EFI70383.1| undecaprenyl pyrophosphate synthetase [Lysinibacillus fusiformis
ZC1]
Length = 264
Score = 219 bits (557), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 102/238 (42%), Positives = 147/238 (61%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
VA S P H+ IIMDGNGRWA R +PR AGH +G++ ++ A+++GIK LT++
Sbjct: 21 VALAKSEPIPAHVAIIMDGNGRWAKKRAMPRVAGHHEGMKTVRKVTRFASDLGIKVLTVY 80
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E+ L++L FL + + N++V +IG+ L L EA
Sbjct: 81 AFSTENWKRPKPEVDFLMRLPVEFLGSFLPEMMERNVRVEMIGDPSLLPAHTQKALYEAM 140
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T+ NTGL L A NY SR E+ A+K + Q ++ G + D+ + +L T+ +P+
Sbjct: 141 EETKHNTGLILNFALNYGSRSEMVNAMKMMLQKVQDGQLTMQDITEDCLTSHLMTAHLPE 200
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDL+IRT GE RLS+F+LWQ+AY+EF F WPDFS E A+ Y R+RR+GGL
Sbjct: 201 PDLLIRTSGEVRLSNFMLWQLAYTEFWFTDTLWPDFSEENLLEAVENYQKRNRRYGGL 258
>gi|319945656|ref|ZP_08019908.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus australis
ATCC 700641]
gi|319748255|gb|EFW00497.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus australis
ATCC 700641]
Length = 249
Score = 219 bits (557), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 108/233 (46%), Positives = 142/233 (60%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA R PR GH+ G+E E+ AA E+G+K LT++AFS NW R
Sbjct: 17 PKHIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQEVTIAAKEMGVKALTVYAFSTENWTR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S ++ L F + L +NN+K+++IG L + L L++AE T NTGL
Sbjct: 77 PQQEVSFIMNLPVEFYDRFVPELHRNNVKIQMIGEVSRLPKETLEALEKAEALTHSNTGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R E+++A+K I Q++ + D+ IA YL TS +P DPDLII
Sbjct: 137 ILNFALNYGGRAELTQAVKQIAQEVLDAHLNPGDITEETIANYLYTSSLPKDLRDPDLII 196
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSE F WPDF + A+ +Y+ R RRFGG+
Sbjct: 197 RTSGELRLSNFLPWQAAYSELYFTDVMWPDFGEKALHDAIEEYSHRHRRFGGV 249
>gi|70726655|ref|YP_253569.1| undecaprenyl pyrophosphate synthase [Staphylococcus haemolyticus
JCSC1435]
gi|82582320|sp|Q4L5W2|UPPS_STAHJ RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|68447379|dbj|BAE04963.1| undecaprenyl pyrophosphatase synthetase [Staphylococcus
haemolyticus JCSC1435]
Length = 256
Score = 219 bits (557), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 153/232 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA R +PR GH +G++ + A+++GIK LT++AFS NW R
Sbjct: 25 PEHVAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKTVTREASDLGIKYLTLYAFSTENWSR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E++ ++ L +FLK L + N+++ IG ++ + ++ A+++T+ NTGL
Sbjct: 85 PENEVNYIMNLPVNFLKTFLPELIEKNVQIETIGFLDAVPKSTIEAIEHAKEKTKNNTGL 144
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY R EI +++K+I+ +++ S D+D S+I K+L T PDP+L+IRT G
Sbjct: 145 KLIFAINYGGRAEIVQSMKSIYDELQRNGQDSKDIDESMINKHLMTHSYPDPELLIRTSG 204
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FL+WQ +YSEF+F + WPDF E F + L Y R RRFGGLSK+
Sbjct: 205 EQRISNFLIWQSSYSEFIFNEKLWPDFDGEEFKNCLKIYQSRQRRFGGLSKE 256
>gi|23099045|ref|NP_692511.1| undecaprenyl pyrophosphate synthetase [Oceanobacillus iheyensis
HTE831]
gi|42559817|sp|Q8EQU9|UPPS_OCEIH RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|22777273|dbj|BAC13546.1| undecaprenyl pyrophosphate synthetase [Oceanobacillus iheyensis
HTE831]
Length = 252
Score = 219 bits (557), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 105/229 (45%), Positives = 145/229 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA RGLPR AGHR+G+ N IV A +K LT++ FS NW+R
Sbjct: 24 PSHIAIIMDGNGRWAQKRGLPRIAGHREGVSTVNRIVKTAVNANVKVLTLYTFSTENWKR 83
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE+ ++KL K FL L +NN++V+ IG+ ++ ++ A ++T+ N GL
Sbjct: 84 PKSEVDFILKLPKEFLHVYLPGLIENNVRVQTIGDFNAVPKHTQDAIEYAMEKTKDNDGL 143
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY SR EI A+K I Q ++ + +D S K+L T+ + DPDL+IRTGG
Sbjct: 144 VLNFALNYGSRYEIIHAVKQIVQKTKASELDVEQLDESYFEKHLFTNGLSDPDLLIRTGG 203
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+F+LWQ+AY+EF F + WP+F + F AL +Y R RR+GG+
Sbjct: 204 EYRLSNFMLWQLAYTEFWFTEKLWPEFDEDTFHQALMEYQQRKRRYGGI 252
>gi|62422068|gb|AAX82616.1| putative undecaprenyl pyrophosphate synthetase [Lactobacillus
reuteri]
Length = 247
Score = 219 bits (557), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 104/228 (45%), Positives = 151/228 (66%), Gaps = 3/228 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R LPR AGH++G++ +I AA+E+G+K L+++AFS NW+R
Sbjct: 20 PNHIAIIMDGNGRWAQKRHLPRVAGHKQGMQTVKKITIAASELGVKVLSLYAFSTENWKR 79
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE+S L++L F L K+N+KV V+G+ L + +K+A T TG+
Sbjct: 80 PSSEVSYLMQLPVRFFSTFVPDLVKHNVKVTVMGDITQLPEATQKAVKDAMADTAHCTGM 139
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV---PDPDLIIR 187
L A NY SRDEI++A K I +D+++G++ D+D + KYL ++ + DPDL+IR
Sbjct: 140 ILNFALNYGSRDEITQAAKEIAEDVQNGNLALADIDEASFGKYLMSAQLGQFADPDLLIR 199
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
T GE+R+S+F+LWQ+AYSE F+PE+WPDF + A+ Y R RR
Sbjct: 200 TSGEERISNFMLWQIAYSELEFVPEHWPDFDEDSLRSAIIAYQGRHRR 247
>gi|304381176|ref|ZP_07363829.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus ATCC BAA-39]
gi|304340159|gb|EFM06100.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus ATCC BAA-39]
Length = 267
Score = 218 bits (556), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 102/236 (43%), Positives = 150/236 (63%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
SS+ P+HI IIMDGNGRWA R +PR GH +G++ +I A+++G+K LT++AFS
Sbjct: 32 SSNIPEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITRVASDIGVKYLTLYAFSTE 91
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP SE++ ++ L +FL+ L + N+KV IG L + + A+++T
Sbjct: 92 NWSRPESEVNYIMNLPVNFLETFLPELIEKNVKVETIGFTDKLPKSTIEAINNAKEKTAN 151
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTGL L A NY R E+ +IKN+F ++ + S +D + I +L T D PDP+L+I
Sbjct: 152 NTGLKLIFAINYGGRAELVHSIKNMFDELHQQGLNSDIIDETYINNHLMTKDYPDPELLI 211
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE+R+S+FL+WQV+YSEF+F + WPDF + + Y R RRFGGLS++
Sbjct: 212 RTSGEQRISNFLIWQVSYSEFIFNQKLWPDFDEDELIKCIKIYQSRQRRFGGLSEE 267
>gi|330996370|ref|ZP_08320253.1| di-trans,poly-cis-decaprenylcistransferase [Paraprevotella
xylaniphila YIT 11841]
gi|329573228|gb|EGG54842.1| di-trans,poly-cis-decaprenylcistransferase [Paraprevotella
xylaniphila YIT 11841]
Length = 246
Score = 218 bits (556), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 149/232 (64%), Gaps = 2/232 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA A+GLPR AGH++G+E +I A +G+K LT++ FS NW R
Sbjct: 13 PRHVAIIMDGNGRWAKAKGLPRTAGHQEGVETVKKITEEAVRLGVKYLTLYTFSTENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
PV EI+ L+ LI L+ + KNN++ RVIG+ + + + L+E T N +
Sbjct: 73 PVPEIAALMGLILDHLEDEIFM--KNNVRFRVIGDMSRIPEAVRVRLEECMQHTAANGKM 130
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ IA +YSSR E+++A++ I +++++G + + I +L T +PDPDL+IRTGG
Sbjct: 131 TMVIALSYSSRWELAQAMRQIAEEVQTGVLSPSRITEETIEAHLVTRFMPDPDLLIRTGG 190
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S++LLWQ AY+EF F YWPDF + F A+ Y R+RRFG S++
Sbjct: 191 EYRISNYLLWQCAYTEFYFCDTYWPDFDEKEFRKAIADYQSRERRFGKTSEQ 242
>gi|281412822|ref|YP_003346901.1| undecaprenyl diphosphate synthase [Thermotoga naphthophila RKU-10]
gi|281373925|gb|ADA67487.1| undecaprenyl diphosphate synthase [Thermotoga naphthophila RKU-10]
Length = 233
Score = 218 bits (556), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 103/229 (44%), Positives = 145/229 (63%), Gaps = 2/229 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RGLPR GH++G +V + V + E+GIK LT F+FS NW+R
Sbjct: 4 PQHVAIIMDGNGRWAKKRGLPRIKGHQRGAKVLHNTVKWSLEMGIKYLTAFSFSTENWKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L + + L+K ++VR++G + L + +L +E E++T+ +
Sbjct: 64 PKEEVEFLMDLFVQMIDREMELLRKERVRVRILGRKEGLSEKVLKKWQEVEEKTKEFDRM 123
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IAFNY R EI A+++I +D+ G ++ +YL DVPDPDLIIRT G
Sbjct: 124 TLVIAFNYGGRREILDAVESILKDVSQGKKI--ELTEETFRQYLYLPDVPDPDLIIRTSG 181
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+FLLWQ AYSE F + WPDF+++ F A+ Y+ R+RRFGGL
Sbjct: 182 EMRLSNFLLWQSAYSELYFFKKPWPDFTKKDFLRAIESYSKRERRFGGL 230
>gi|228966768|ref|ZP_04127812.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228792867|gb|EEM40425.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar sotto str. T04001]
Length = 222
Score = 218 bits (556), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 101/222 (45%), Positives = 146/222 (65%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA R +PR AGH +G++V +I A+++ +K LT++AFS NW+RP E+
Sbjct: 1 MDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLNVKVLTLYAFSTENWKRPKKEVDY 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+KL + FL L + N++VRVIG + L +++A + T+ NTGL L A N
Sbjct: 61 LMKLPEEFLGTFLPELIEENVQVRVIGQKDRLPTHTRRAMEKAMEDTKENTGLILNFALN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y SRDEI A++++ +D E G + S +V +++ YL TS +PDP+L+IRT GE R+S+F
Sbjct: 121 YGSRDEIVSAVQHMMKDNEEGKIRSEEVSEEMLSSYLMTSSLPDPELLIRTSGELRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+LWQ+AYSEF F YWPDF E +A+ + R RRFGG+
Sbjct: 181 MLWQIAYSEFWFTDVYWPDFKEEHLLNAITDFQHRGRRFGGV 222
>gi|259501579|ref|ZP_05744481.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners DSM
13335]
gi|302191447|ref|ZP_07267701.1| undecaprenyl pyrophosphate synthase [Lactobacillus iners AB-1]
gi|325913508|ref|ZP_08175874.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners
UPII 60-B]
gi|259167097|gb|EEW51592.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners DSM
13335]
gi|325477277|gb|EGC80423.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners
UPII 60-B]
Length = 239
Score = 218 bits (556), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 147/231 (63%), Gaps = 3/231 (1%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
DH+ IIMDGNGRWA R LPR GHR G+ EI A E+G+K LT++AFS NW RP
Sbjct: 9 DHLAIIMDGNGRWAQERHLPRIIGHRSGMNKVKEIALVANELGVKVLTLYAFSTENWGRP 68
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E++ L+KL +F K L+KNNIKV ++G L ++K+AE +T N G+
Sbjct: 69 RDEVNYLMKLPINFFDKFMPELQKNNIKVNIMGFNDKLPLATAEIIKKAEQETADNDGMI 128
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS---DVPDPDLIIRT 188
L AFNY SR EI+ AI I DI++ + ++ L++ YL T+ D DPDL+IRT
Sbjct: 129 LNFAFNYGSRQEITAAISKIALDIQNKKIEVDSINEQLVSDYLMTAKFGDYADPDLLIRT 188
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE+RLS+F+LWQ+AYSEF F YWPDF+ + F + +Y RDRRFG +
Sbjct: 189 SGEERLSNFMLWQLAYSEFYFTKTYWPDFTTDEFKKIVEEYQHRDRRFGKI 239
>gi|269926621|ref|YP_003323244.1| undecaprenyl diphosphate synthase [Thermobaculum terrenum ATCC
BAA-798]
gi|269790281|gb|ACZ42422.1| undecaprenyl diphosphate synthase [Thermobaculum terrenum ATCC
BAA-798]
Length = 234
Score = 218 bits (556), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 105/234 (44%), Positives = 149/234 (63%), Gaps = 4/234 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
MS+ P+HIGIIMDGNGRWA + GLPR GHR G+ +V A E+GIK LT++AFS
Sbjct: 1 MSNGIPNHIGIIMDGNGRWAVSHGLPRYEGHRAGVRNIRNVVEACVELGIKYLTVYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+S L+ ++++ LK L KN +++R +G+ L + + +++A + T+
Sbjct: 61 ENWSRPPEEVSMLLSILENVLKTETPELHKNGVQIRHLGSLDELPEHLQHEIRKALELTK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N L L +A+NY R EI A+K I + V +D L ++YL T+ +PDPDLI
Sbjct: 121 YNDRLVLSVAYNYGGRAEIVHAVKRIILE----GVPPDKIDEHLFSQYLYTAGLPDPDLI 176
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRT GE RLS+FL+WQ AY+E+ P +WPDF++E A+ Y R R+FGGL
Sbjct: 177 IRTAGEMRLSNFLIWQAAYAEYWSTPVFWPDFTKEHLKQAVEDYGRRQRKFGGL 230
>gi|154491825|ref|ZP_02031451.1| hypothetical protein PARMER_01446 [Parabacteroides merdae ATCC
43184]
gi|154088066|gb|EDN87111.1| hypothetical protein PARMER_01446 [Parabacteroides merdae ATCC
43184]
Length = 247
Score = 218 bits (556), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 99/232 (42%), Positives = 149/232 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA A+G R GH++G+ ++V AA VG+K LT++ FS NW R
Sbjct: 13 PQHVAIIMDGNGRWAKAKGKDRSYGHQEGVVSVRKVVEAATTVGLKYLTMYTFSTENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L+ L+ + + + L KNN+++ IGN L D L++ QT NTG+
Sbjct: 73 PEAEVQALMSLLVAAIHRETPDLMKNNVRLMAIGNLDRLPADAYATLQDCIAQTSANTGV 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +YS+R EI+ A+K + ++ + D+ ++++ YL T +PDPDL+IRTGG
Sbjct: 133 TLILALSYSARWEITEAVKRLAREAVEKKINPDDITEAVVSDYLTTKGIPDPDLLIRTGG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FLLWQ++Y+EF F YWPDF E + A+ Y R+RRFG S++
Sbjct: 193 EQRVSNFLLWQLSYAEFFFTDVYWPDFREEELYGAILYYQQRERRFGKTSEQ 244
>gi|87118623|ref|ZP_01074522.1| undecaprenyl diphosphate synthase [Marinomonas sp. MED121]
gi|86166257|gb|EAQ67523.1| undecaprenyl diphosphate synthase [Marinomonas sp. MED121]
Length = 248
Score = 218 bits (556), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 103/228 (45%), Positives = 142/228 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGN RWA R LP AGH+ G +V AA G+K LT+FAFS NW+R
Sbjct: 20 PSHIAIIMDGNNRWAKQRFLPGIAGHKAGAGAVRRVVEDAARAGVKVLTLFAFSSENWKR 79
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L+ L LKK + K +I++R++G D + + +E +T+ N G+
Sbjct: 80 PQAEVDALMMLFMRSLKKEVKRMNKQDIRLRIMGEVSGFSDKLQAQIALSEKETQDNQGM 139
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +IS A + + Q + G + ++ IA L +D+PDPDLIIRT G
Sbjct: 140 QLVIAANYGGRGDISHAARKVCQQVLDGELNLDQINEETIASQLYLADLPDPDLIIRTSG 199
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R+S+FLLWQ AYSEFVF+P WPDF+++ F HA++ Y R RR+GG
Sbjct: 200 EERISNFLLWQAAYSEFVFLPVLWPDFNKDDFQHAIDLYQQRQRRYGG 247
>gi|311068175|ref|YP_003973098.1| undecaprenyl pyrophosphate synthase [Bacillus atrophaeus 1942]
gi|310868692|gb|ADP32167.1| undecaprenyl pyrophosphate synthase [Bacillus atrophaeus 1942]
Length = 260
Score = 218 bits (556), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 105/229 (45%), Positives = 145/229 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH +G++V A E+G+K L+++AFS NW+R
Sbjct: 32 PAHIAIIMDGNGRWAKKRALPRIAGHHEGMKVVKRTTKLANELGVKVLSLYAFSTENWKR 91
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL + FL L + N++V+++G++ +L D +++A T N GL
Sbjct: 92 PKPEVDFLMKLPEEFLNTYLPELVEENVRVQIMGDQSTLPDHTFRAMEKAVRDTEQNDGL 151
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY R EI A K++ + ++ GS+ D+D SL + YL T + DP+L+IRT G
Sbjct: 152 ILNFALNYGGRTEIVCAAKSLAEKVKDGSLNVEDIDESLFSDYLMTESLQDPELLIRTSG 211
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+F+LWQVAYSEFVF WPDF F AL ++ R RRFGG+
Sbjct: 212 EIRLSNFMLWQVAYSEFVFTDVLWPDFKENDFLKALGEFQQRGRRFGGI 260
>gi|228476488|ref|ZP_04061178.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
salivarius SK126]
gi|228251909|gb|EEK10955.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
salivarius SK126]
Length = 249
Score = 218 bits (556), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 106/233 (45%), Positives = 148/233 (63%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HIGIIMDGNGRWA R PR GH+ G++ ++ A+++G+K LT++AFS NW R
Sbjct: 17 PNHIGIIMDGNGRWAKKRLQPRVMGHKAGMDALQKVTIEASQLGVKVLTVYAFSTENWSR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ ++ L F K L KNN+++ IG+ L + L L++A +QT+ N+GL
Sbjct: 77 PQDEVKFIMNLPVEFFNKYVPELDKNNVRILTIGDNSRLPKETLDALEKAVEQTKHNSGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI A++ I +++E+G + +D LIAK+L T +P DPDLII
Sbjct: 137 VLNFALNYGGRAEIVSAVQAIAKEVEAGKLGPEAIDEDLIAKHLMTDKLPYLYRDPDLII 196
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSEF F +WPDF ++ A++ YN R RRFGG+
Sbjct: 197 RTSGELRLSNFLPWQSAYSEFYFTDVFWPDFDQQGLRQAISDYNKRHRRFGGV 249
>gi|221142494|ref|ZP_03566987.1| di-trans, poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus str. JKD6009]
gi|269940751|emb|CBI49133.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus subsp.
aureus TW20]
gi|302751083|gb|ADL65260.1| di-trans, poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus str. JKD6008]
gi|329313930|gb|AEB88343.1| Di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus T0131]
Length = 256
Score = 218 bits (556), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 102/236 (43%), Positives = 150/236 (63%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
SS+ P+HI IIMDGNGRWA R +PR GH +G++ +I A+++G+K LT++AFS
Sbjct: 21 SSNIPEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITRVASDIGVKYLTLYAFSTE 80
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP SE++ ++ L +FL+ L + N+KV IG L + + A+++T
Sbjct: 81 NWSRPESEVNYIMNLPVNFLETFLPELIEKNVKVETIGFTDKLPKSTIEAINNAKEKTAN 140
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTGL L A NY R E+ +IKN+F ++ + S +D + I +L T D PDP+L+I
Sbjct: 141 NTGLKLIFAINYGGRAELVHSIKNMFDELHQQGLNSDIIDETYINNHLMTKDYPDPELLI 200
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE+R+S+FL+WQV+YSEF+F + WPDF + + Y R RRFGGLS++
Sbjct: 201 RTSGEQRISNFLIWQVSYSEFIFNQKLWPDFDEDELIKCIKIYQSRQRRFGGLSEE 256
>gi|94263225|ref|ZP_01287042.1| Di-trans-poly-cis-decaprenylcistransferase [delta proteobacterium
MLMS-1]
gi|93456443|gb|EAT06563.1| Di-trans-poly-cis-decaprenylcistransferase [delta proteobacterium
MLMS-1]
Length = 245
Score = 218 bits (556), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 103/236 (43%), Positives = 148/236 (62%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S P HI IIMDGNGRWA RG PR GH+ G+ E V+ A E+G++ LT++AFS
Sbjct: 4 SGHLPRHIAIIMDGNGRWAKKRGKPRLMGHQAGVRAVRETVSGARELGVEVLTLYAFSTE 63
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+ L+ L++++L+ + + ++++ G L + VLK+A ++T
Sbjct: 64 NWRRPGPEVESLMGLLENYLQNQLDQMLSHGVRLQTCGAIDLLPARVQRVLKDARERTAA 123
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N GL L +A +Y SRDEI RA + + ++ +G ++ IA YLDT+ +PDPDL+I
Sbjct: 124 NDGLILNLALSYGSRDEIVRASRRLAAEVAAGRQAVAAINEETIADYLDTAGLPDPDLLI 183
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE RLS+FLLWQ++YSE F WPDF R+ A++ Y R RRFG S++
Sbjct: 184 RTGGEARLSNFLLWQLSYSELYFTEVLWPDFGRQHLQTAIDDYQQRQRRFGRTSEQ 239
>gi|319940265|ref|ZP_08014617.1| undecaprenyl diphosphate synthase [Streptococcus anginosus
1_2_62CV]
gi|319810567|gb|EFW06903.1| undecaprenyl diphosphate synthase [Streptococcus anginosus
1_2_62CV]
Length = 249
Score = 218 bits (555), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 108/233 (46%), Positives = 143/233 (61%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA R PR GH+ G+E + AA E+G++ LT++AFS NW R
Sbjct: 17 PKHIGIIMDGNGRWAKKRMQPRVFGHKSGMETLQNVTIAAKELGVQVLTVYAFSTENWSR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S ++ L F + L +NN+K+++IG+ L L +AE+ TRLNTGL
Sbjct: 77 PQKEVSFIMNLPVEFYDRYVPELHRNNVKIQMIGDTEQLPKATYDALCKAEELTRLNTGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI +A+K I QD+ ++D +IA YL TS +P DPDL+I
Sbjct: 137 ILNFALNYGGRAEIVQAVKMIAQDVLDAKFSPGEIDEEIIANYLQTSSLPRLLRDPDLVI 196
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSE F WPDF + A+ +Y+ R+RRFGG+
Sbjct: 197 RTSGELRLSNFLPWQSAYSELYFTDILWPDFDEKALKAAIEEYSKRNRRFGGV 249
>gi|253573557|ref|ZP_04850900.1| di-trans,poly-cis-decaprenylcistransferase [Paenibacillus sp. oral
taxon 786 str. D14]
gi|251847085|gb|EES75090.1| di-trans,poly-cis-decaprenylcistransferase [Paenibacillus sp. oral
taxon 786 str. D14]
Length = 255
Score = 218 bits (555), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 105/241 (43%), Positives = 150/241 (62%), Gaps = 3/241 (1%)
Query: 3 ASMMSSSP---PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ +S SP P H+ IIMDGNGRWA G+PR GHR G++ AA E+GI LT
Sbjct: 15 GAFVSLSPDNIPKHVAIIMDGNGRWARRLGMPRIVGHRSGMKAVKRATIAADELGISILT 74
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++AFS NW+RP E+ L+ L + FL L + N++VR++G+ L + ++E
Sbjct: 75 LYAFSTENWKRPKDEVDYLMSLPQEFLAIELDELVEKNVQVRMMGHTDELPAHTIAAMEE 134
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV 179
A ++T+ NTGL L A NY SR EI+ ++K I + ++SG + D+ I L ++ +
Sbjct: 135 AIERTKHNTGLILNFALNYGSRREITESVKGIAKAVQSGELSVEDITPDTIESRLLSAGL 194
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDPDL+IRT GE RLS+F+LWQ AYSE F +WPDFS+E A+ +Y R RR+GGL
Sbjct: 195 PDPDLLIRTSGELRLSNFMLWQTAYSELWFTDIFWPDFSKEHLVQAVAEYQRRTRRYGGL 254
Query: 240 S 240
+
Sbjct: 255 T 255
>gi|78485625|ref|YP_391550.1| undecaprenyl diphosphate synthase [Thiomicrospira crunogena XCL-2]
gi|78363911|gb|ABB41876.1| Undecaprenyl pyrophosphate synthetase [Thiomicrospira crunogena
XCL-2]
Length = 244
Score = 218 bits (555), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 109/240 (45%), Positives = 155/240 (64%), Gaps = 3/240 (1%)
Query: 4 SMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
S +SSP P HI IIMDGNGRWA R LPR GH+KG+ +V+ AE+G+ +LT+FA
Sbjct: 3 SKSTSSPIPKHIAIIMDGNGRWAKKRLLPRFVGHQKGLNAVKRVVSRCAELGVDSLTLFA 62
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW+RP E+++L+ L L+K L +N +++R+IG+R + ++DI +++AE
Sbjct: 63 FSTENWKRPEEEVNKLMGLFLKALQKEVTKLHENQVRLRIIGDRGAFNEDIQTHIEQAEQ 122
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTGL L IA NY R +I A+K Q S V ++ S I ++ SD P P
Sbjct: 123 LTENNTGLTLNIAANYGGRWDIVDAVKKWHQANPSKDVS--ELSESEICHHISLSDQPVP 180
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL+IRTGGE+R+S+FL+WQ+AY+EF F E WPDF+ E A+ + R+RRFG S++
Sbjct: 181 DLLIRTGGEQRISNFLIWQMAYAEFYFCDELWPDFNEESIDRAIGSFQQRERRFGKTSEQ 240
>gi|160893345|ref|ZP_02074132.1| hypothetical protein CLOL250_00894 [Clostridium sp. L2-50]
gi|156865037|gb|EDO58468.1| hypothetical protein CLOL250_00894 [Clostridium sp. L2-50]
Length = 242
Score = 218 bits (555), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 101/229 (44%), Positives = 141/229 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA R +PR GH +G + A E+GIK LT++AFS NW+R
Sbjct: 13 PEHVAIIMDGNGRWAKKRLMPRTYGHSEGAKAIERTCENADELGIKYLTVYAFSTENWKR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
V E+S ++ + + +L +NN++VR+IG R L +DI+ + E T NTGL
Sbjct: 73 SVEEVSTIMNIFRKYLVDSIERSNRNNMRVRIIGKREDLPEDIVEKMYNLEKATANNTGL 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY RDEI+RA++ I D +G + V ++ YLDT ++ DPDL+IRT G
Sbjct: 133 QFSVAINYGGRDEITRAVRQIASDCMAGKLSPDAVTEDTVSSYLDTKELTDPDLLIRTSG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R S+FL WQ+AYSEF F WPDF + +A Y+ RDRR+GG+
Sbjct: 193 ELRTSNFLPWQIAYSEFYFTDVLWPDFDMDELVNACRYYSHRDRRYGGV 241
>gi|89054948|ref|YP_510399.1| undecaprenyl pyrophosphate synthetase [Jannaschia sp. CCS1]
gi|88864497|gb|ABD55374.1| Undecaprenyl pyrophosphate synthetase [Jannaschia sp. CCS1]
Length = 241
Score = 218 bits (555), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 106/239 (44%), Positives = 149/239 (62%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M +S+ P H+ IIMDGNGRWA R PR GH G + EIV AA + G+K LTI
Sbjct: 1 MPTQSETSNAPKHVAIIMDGNGRWAQMRHRPRLVGHHAGAKRVREIVRAAPDHGVKYLTI 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW+R +E++ L+KL K ++++ +L + VR IG+R+ L+ ++ ++
Sbjct: 61 FAFSTENWKRTQTEVAGLMKLFKRYIRREAQNLLDEGVCVRFIGDRVRLEPALVDLMDGL 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E T N ++L IA NY RDE++RA K + D+ G + DV KYLDT +P
Sbjct: 121 ELLTADNDKVHLTIALNYGGRDEVARAAKRMAYDVSMGKLNPRDVCDETFPKYLDTHVLP 180
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRT GE R+S+FLLWQ AY+E+ FI WPDF+ ++F L ++ RDRRFG +
Sbjct: 181 DPDLVIRTSGEARISNFLLWQSAYAEYEFIDTLWPDFTADVFASVLGRFGARDRRFGAV 239
>gi|148270515|ref|YP_001244975.1| undecaprenyl pyrophosphate synthase [Thermotoga petrophila RKU-1]
gi|147736059|gb|ABQ47399.1| Undecaprenyl pyrophosphate synthetase [Thermotoga petrophila RKU-1]
Length = 233
Score = 218 bits (555), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 103/229 (44%), Positives = 144/229 (62%), Gaps = 2/229 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RGLPR GH++G +V + V + E+GIK LT F+FS NW+R
Sbjct: 4 PQHVAIIMDGNGRWAKKRGLPRIKGHQRGAKVLHNTVKWSLEMGIKYLTAFSFSTENWKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L + + L+K ++VR++G + L + +L +E E++T+ +
Sbjct: 64 PKEEVEFLMDLFVQMIDREMELLRKERVRVRILGRKEGLSEKVLKKWQEVEEKTKEFDRM 123
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IAFNY R EI A+++I +D+ G ++ +YL DVPDPDLIIRT G
Sbjct: 124 TLVIAFNYGGRREILDAVESILKDVSQGKKI--ELTEETFRQYLYLPDVPDPDLIIRTSG 181
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+FLLWQ AYSE F + WPDF++ F A+ Y+ R+RRFGGL
Sbjct: 182 EMRLSNFLLWQSAYSELYFFKKPWPDFTKRDFLRAIESYSKRERRFGGL 230
>gi|332976810|gb|EGK13638.1| di-trans,poly-cis-decaprenylcistransferase [Desmospora sp. 8437]
Length = 272
Score = 218 bits (555), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 102/238 (42%), Positives = 148/238 (62%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ ++ P H+ IIMDGNGRWA +RG+PR AGHR G++ I AA ++GI+ LT++
Sbjct: 35 IHTLQKGPLPRHVAIIMDGNGRWAKSRGMPRVAGHRAGMKTVRHITRAADDLGIEALTLY 94
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
+FS NW+RP E++ L+ L FL+ L NI+VR++G L + + +
Sbjct: 95 SFSTENWKRPKEEVNYLMGLPGEFLRTDLDELVARNIQVRMLGEEDQLPGHTRDAILKFK 154
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ TR NTG+ L A NY SR E+ RA+ I D+ SG + VD L T+D+P+
Sbjct: 155 EATRDNTGMILSFALNYGSRAEMIRAMHGIIDDVISGKLEKETVDEDYFGSTLYTADLPE 214
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDL+IRT GE R+S+F+LWQ+AYSE F WPDF+RE+FF A++ + R RR+G +
Sbjct: 215 PDLMIRTSGEVRISNFMLWQLAYSELWFTDVLWPDFTREMFFEAIDDFQRRSRRYGAV 272
>gi|84389788|ref|ZP_00991340.1| undecaprenyl diphosphate synthase [Vibrio splendidus 12B01]
gi|84376889|gb|EAP93763.1| undecaprenyl diphosphate synthase [Vibrio splendidus 12B01]
Length = 250
Score = 218 bits (555), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 99/231 (42%), Positives = 154/231 (66%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ S P HI IIMDGNGRWA A+G PR GH+ G+ + ++++A +GIK +T+FAFS
Sbjct: 8 TDSLPKHIAIIMDGNGRWAKAQGKPRVFGHKNGVRAVRKTISSSARLGIKAVTLFAFSSE 67
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+ L++L S L L KNN+++RVIG++ +D + ++EAE T
Sbjct: 68 NWRRPEEEVGILMELFISVLSSEVKKLHKNNLQLRVIGDKSRFNDRLQKKIEEAEALTST 127
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTG+ + IA NY + +I +A+ +I Q ++SG + D+D ++I ++L +D+P+ DL+I
Sbjct: 128 NTGMVINIAANYGGKWDIQQAMTSIAQQVKSGDINVDDIDEAMITQHLTMADIPEVDLLI 187
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE R+S+F+LWQ+AY+E F ++WPDF+ + A+ + R+RRFG
Sbjct: 188 RTSGECRISNFMLWQLAYAEMYFTEQFWPDFNEDSLVEAVTWFVNRERRFG 238
>gi|86140715|ref|ZP_01059274.1| Undecaprenyl pyrophosphate synthase [Leeuwenhoekiella blandensis
MED217]
gi|85832657|gb|EAQ51106.1| Undecaprenyl pyrophosphate synthase [Leeuwenhoekiella blandensis
MED217]
Length = 246
Score = 218 bits (554), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 152/232 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA +GL R GH+KG + E + A AE+G+ +T++AFS NW R
Sbjct: 13 PKHIAVIMDGNGRWAKNQGLLRVKGHKKGTKAVRETIEACAELGVPFVTLYAFSTENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L+ S LKK +L+ NNI + IG+ SL + LKE ++T+ N+ L
Sbjct: 73 PKLEVDTLMNLLVSSLKKEIKTLQDNNISLSAIGSLQSLPEKAQRELKEVMEKTKNNSRL 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y +R+E+ + I++I ++ + H ++ S+I ++L T D+PD DL+IRT G
Sbjct: 133 RLTLALSYGAREELVKTIQDISLKVKKNLISPHLINESVIKEHLYTHDMPDVDLLIRTSG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FLLWQ+AY+E F P WPDF+R+ + A+ Y R+RRFG S++
Sbjct: 193 EQRISNFLLWQIAYAELYFTPVLWPDFTRKHLYEAIYNYQKRERRFGKTSEQ 244
>gi|313904229|ref|ZP_07837608.1| undecaprenyl diphosphate synthase [Eubacterium cellulosolvens 6]
gi|313471031|gb|EFR66354.1| undecaprenyl diphosphate synthase [Eubacterium cellulosolvens 6]
Length = 241
Score = 218 bits (554), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 100/227 (44%), Positives = 144/227 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI II+DGNGRWA +G+PR GH G + ++ E+GIK LT++AFS NW+R
Sbjct: 11 PQHIAIILDGNGRWAKRKGMPRSYGHIVGCDNLEKMCDMMCEMGIKYLTVYAFSTENWKR 70
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ L + +LK+ KKN ++V++IG+ +LD+DI +KE E ++ +
Sbjct: 71 SPDEVRTLMNLFRKYLKRCMRKAKKNEMRVKIIGDPSALDEDIQESIKELEGMSKDYDKM 130
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
IA NY RDEI RA+ + D+ G + + + +YLDT+ +PDPDL+IRT G
Sbjct: 131 FFQIALNYGGRDEIERAVTKLADDVREGKIPEGRITGEVFEQYLDTAGMPDPDLMIRTSG 190
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+FLLWQ+AY+EF F WPDF+R+ A+ +YN RDRRFG
Sbjct: 191 ELRISNFLLWQLAYTEFYFTDVAWPDFNRKELIKAIEKYNGRDRRFG 237
>gi|237808852|ref|YP_002893292.1| undecaprenyl diphosphate synthase [Tolumonas auensis DSM 9187]
gi|237501113|gb|ACQ93706.1| undecaprenyl diphosphate synthase [Tolumonas auensis DSM 9187]
Length = 259
Score = 218 bits (554), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 102/236 (43%), Positives = 150/236 (63%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
++ + + S P H+ IIMDGNGRWA RG R AGH+ G+ ++V+ A+ +GIK LT+F
Sbjct: 7 ISEIANQSMPKHVAIIMDGNGRWAQQRGKIRVAGHKAGVASVRQVVSIASRMGIKALTLF 66
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP SE+S L++L L + L NI++RVIGN + + + +AE
Sbjct: 67 AFSSENWRRPESEVSALMELFMFVLGREVRKLHDGNIRLRVIGNIHGFSERLQKKIHDAE 126
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T NTG+ L IA NY + +I +A + I + + G + +D SL++++L +D+PD
Sbjct: 127 ALTANNTGMTLNIAANYGGQWDIVQACQQIAEKVAQGGLLPEQIDESLLSQHLSMADIPD 186
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRTGG+ R+S+FLLWQ+AY+E F P WPDF + F A+ + R+RRFG
Sbjct: 187 VDLLIRTGGDHRISNFLLWQIAYAELFFTPVLWPDFGEDQFMEAIASFVSRERRFG 242
>gi|330685684|gb|EGG97325.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU121]
Length = 256
Score = 218 bits (554), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 151/232 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA R +PR GH +G++ ++ A+++GIK LT++AFS NW R
Sbjct: 25 PEHVAIIMDGNGRWAKQRKMPRIKGHYEGMQTIKKVTREASDIGIKYLTLYAFSTENWSR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE++ ++ L +FLK L + N+KV IG + L + + A+++T+ NTGL
Sbjct: 85 PESEVNYIMNLPVNFLKTFLPELIEKNVKVETIGFQKGLPTSTIEAIDHAKEKTKNNTGL 144
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY R EI ++ K I +++ + S D++ LI ++L T + PDP+L+IRT G
Sbjct: 145 RLIFAINYGGRAEIVQSFKTIVDELQHKGLSSDDINEDLINQHLMTKNYPDPELLIRTSG 204
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FL+WQV+YSEF+F + WPDF + + L Y R RRFGGLS++
Sbjct: 205 EQRISNFLIWQVSYSEFIFNEKLWPDFDGDELKNCLKIYQSRQRRFGGLSEE 256
>gi|239636262|ref|ZP_04677264.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus warneri
L37603]
gi|239597617|gb|EEQ80112.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus warneri
L37603]
Length = 256
Score = 218 bits (554), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 151/232 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA R +PR GH +G++ ++ A+++GIK LT++AFS NW R
Sbjct: 25 PEHVAIIMDGNGRWAKQRKMPRIKGHYEGMQTIKKVTREASDIGIKYLTLYAFSTENWSR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE++ ++ L +FLK L + N+KV IG + L + + A+++T+ NTGL
Sbjct: 85 PESEVNYIMNLPVNFLKTFLPELIEKNVKVETIGFQKGLPTSTIEAIDHAKEKTKNNTGL 144
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY R EI ++ K I +++ + S D++ LI ++L T + PDP+L+IRT G
Sbjct: 145 RLIFAINYGGRAEIVQSFKTIVDELQHKGLSSDDINEDLINQHLMTKNYPDPELLIRTSG 204
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FL+WQV+YSEF+F + WPDF + + L Y R RRFGGLS++
Sbjct: 205 EQRISNFLIWQVSYSEFIFNEKLWPDFDGDELKNCLKIYQSRQRRFGGLSEE 256
>gi|257882950|ref|ZP_05662603.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium
1,231,502]
gi|257889271|ref|ZP_05668924.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium
1,231,410]
gi|258615942|ref|ZP_05713712.1| undecaprenyl diphosphate synthase [Enterococcus faecium DO]
gi|260560117|ref|ZP_05832295.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium C68]
gi|293556643|ref|ZP_06675208.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
E1039]
gi|293560206|ref|ZP_06676708.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
E1162]
gi|293567717|ref|ZP_06679059.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
E1071]
gi|294613943|ref|ZP_06693878.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
E1636]
gi|294618729|ref|ZP_06698261.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
E1679]
gi|294620757|ref|ZP_06699964.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
U0317]
gi|314937499|ref|ZP_07844832.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
TX0133a04]
gi|314942158|ref|ZP_07849012.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
TX0133C]
gi|314947502|ref|ZP_07850917.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
TX0082]
gi|314951489|ref|ZP_07854538.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
TX0133A]
gi|314992579|ref|ZP_07857997.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
TX0133B]
gi|314995486|ref|ZP_07860586.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
TX0133a01]
gi|257818608|gb|EEV45936.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium
1,231,502]
gi|257825631|gb|EEV52257.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium
1,231,410]
gi|260073952|gb|EEW62276.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium C68]
gi|291589560|gb|EFF21366.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
E1071]
gi|291593218|gb|EFF24792.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
E1636]
gi|291595042|gb|EFF26387.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
E1679]
gi|291599737|gb|EFF30747.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
U0317]
gi|291601178|gb|EFF31465.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
E1039]
gi|291605878|gb|EFF35310.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
E1162]
gi|313590320|gb|EFR69165.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
TX0133a01]
gi|313592871|gb|EFR71716.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
TX0133B]
gi|313596329|gb|EFR75174.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
TX0133A]
gi|313599081|gb|EFR77926.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
TX0133C]
gi|313643140|gb|EFS07720.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
TX0133a04]
gi|313646052|gb|EFS10632.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
TX0082]
Length = 270
Score = 217 bits (553), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 106/235 (45%), Positives = 147/235 (62%), Gaps = 4/235 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH++G+E ++ A+ +G+K LT++AFS NW+R
Sbjct: 27 PQHIAIIMDGNGRWAQNRRLPRVAGHKEGMETVKKVTKKASRLGVKVLTLYAFSTENWKR 86
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L F L K N+KV V+G L + ++ A +QT+ NTG+
Sbjct: 87 PKDEVSFLMQLPVDFFDTFVPELIKENVKVHVMGYENVLPEHTQDAVRRAIEQTKNNTGM 146
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY SR EI A++ I +++ G + + ++D LIAK+L T +P DP+L+I
Sbjct: 147 VLNFALNYGSRAEIVTAVQEIAEEVAKGEIHAEEIDDELIAKHLMTGFLPKELQDPELMI 206
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
RT GE+R+S+FLLWQ+AYSE F WPDF A+ Y RDRRFGG+ K
Sbjct: 207 RTSGEERISNFLLWQIAYSELYFTKALWPDFDGAHLEEAIASYQNRDRRFGGVKK 261
>gi|257878532|ref|ZP_05658185.1| undecaprenyl diphosphate synthase [Enterococcus faecium 1,230,933]
gi|257812760|gb|EEV41518.1| undecaprenyl diphosphate synthase [Enterococcus faecium 1,230,933]
Length = 269
Score = 217 bits (553), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 106/235 (45%), Positives = 147/235 (62%), Gaps = 4/235 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH++G+E ++ A+ +G+K LT++AFS NW+R
Sbjct: 26 PQHIAIIMDGNGRWAQNRRLPRVAGHKEGMETVKKVTKKASRLGVKVLTLYAFSTENWKR 85
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L F L K N+KV V+G L + ++ A +QT+ NTG+
Sbjct: 86 PKDEVSFLMQLPVDFFDTFVPELIKENVKVHVMGYENVLPEHTQDAVRRAIEQTKNNTGM 145
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY SR EI A++ I +++ G + + ++D LIAK+L T +P DP+L+I
Sbjct: 146 VLNFALNYGSRAEIVTAVQEIAEEVAKGEIHAEEIDDELIAKHLMTGFLPKELQDPELMI 205
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
RT GE+R+S+FLLWQ+AYSE F WPDF A+ Y RDRRFGG+ K
Sbjct: 206 RTSGEERISNFLLWQIAYSELYFTKALWPDFDGAHLEEAIASYQNRDRRFGGVKK 260
>gi|312869038|ref|ZP_07729215.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus oris
PB013-T2-3]
gi|311095464|gb|EFQ53731.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus oris
PB013-T2-3]
Length = 254
Score = 217 bits (553), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 103/235 (43%), Positives = 151/235 (64%), Gaps = 3/235 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH++G++ I AA+ +G+K LT++AFS NW+R
Sbjct: 20 PHHIAIIMDGNGRWAQKRHLPRVAGHKQGMQTVKTITIAASNLGVKVLTLYAFSTENWKR 79
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE++ L++L F L KNN++V V+G+ L + +A T G+
Sbjct: 80 PSSEVNYLMQLPIRFFSTFVPDLVKNNVRVMVMGDIQRLPSKTQQAVNDAIADTANCDGM 139
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS---DVPDPDLIIR 187
L A NY SRDEI+RA++ + +++G++ +D L++++L T+ + DPDL+IR
Sbjct: 140 VLNFALNYGSRDEITRAVQEVAAVVQAGTISPEAIDEELVSQHLMTAPLGEFADPDLLIR 199
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
T GE+R+S+FLLWQ+AYSE F+PE+WPDF E A+ ++ R RRFGGL +
Sbjct: 200 TSGEERISNFLLWQLAYSELEFVPEHWPDFDAESLKRAIVEFQGRHRRFGGLKNE 254
>gi|227551762|ref|ZP_03981811.1| undecaprenyl diphosphate synthase [Enterococcus faecium TX1330]
gi|257887077|ref|ZP_05666730.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium
1,141,733]
gi|257895642|ref|ZP_05675295.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium Com12]
gi|293377747|ref|ZP_06623936.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
PC4.1]
gi|227179067|gb|EEI60039.1| undecaprenyl diphosphate synthase [Enterococcus faecium TX1330]
gi|257823131|gb|EEV50063.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium
1,141,733]
gi|257832207|gb|EEV58628.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium Com12]
gi|292643747|gb|EFF61868.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
PC4.1]
Length = 270
Score = 217 bits (553), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 105/235 (44%), Positives = 147/235 (62%), Gaps = 4/235 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R LPR AGH++G+E ++ A+ +G+K LT++AFS NW+R
Sbjct: 27 PQHVAIIMDGNGRWAQNRRLPRVAGHKEGMETVKKVTKKASRLGVKVLTLYAFSTENWKR 86
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L F L K N+KV V+G L + +K A +QT+ NTG+
Sbjct: 87 PKDEVSFLMQLPVDFFDTFVPELIKENVKVHVMGYENVLPEQTQDAVKRAIEQTKDNTGM 146
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY SR EI A++NI +++ G + + ++D +IA +L T +P DP+L+I
Sbjct: 147 VLNFALNYGSRAEIVTAVQNIAEEVAKGEIQAEEIDDEVIANHLMTGFLPKELQDPELMI 206
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
RT GE+R+S+FLLWQ+AYSE F WPDF A+ Y RDRRFGG+ K
Sbjct: 207 RTSGEERISNFLLWQIAYSELYFTKALWPDFDGAHLEEAIASYQNRDRRFGGVKK 261
>gi|325280790|ref|YP_004253332.1| Undecaprenyl pyrophosphate synthase [Odoribacter splanchnicus DSM
20712]
gi|324312599|gb|ADY33152.1| Undecaprenyl pyrophosphate synthase [Odoribacter splanchnicus DSM
20712]
Length = 262
Score = 217 bits (553), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 99/235 (42%), Positives = 153/235 (65%), Gaps = 1/235 (0%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++++ P+HI IIMDGNGRWA RGL R GH++G++ +V A+ E+G+K LT++ F
Sbjct: 7 EIIAAGLPEHIAIIMDGNGRWAEQRGLDRVYGHKQGVDTVKSVVEASGEIGLKYLTLYTF 66
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
SI NW RP +E+ L+ L+ + + L + ++V+VIGN L +++ L+ +
Sbjct: 67 SIENWNRPRAEVDALMGLMTDAIIRETSELMRQKVRVKVIGNTGDLPEEVWHKLEGLIHR 126
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVC-SHDVDSSLIAKYLDTSDVPDP 182
T NTG+ L +A +Y +R EI A + + D ++G V + +V L A+YL T+ +PDP
Sbjct: 127 TAANTGVTLVLALSYGARWEIVEAARRLMADYKAGKVTDTEEVTDELFARYLTTAGIPDP 186
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRT GE RLS+FLLWQ AY+EF FI ++WPDF ++ + A+ + R+RRFG
Sbjct: 187 DLLIRTSGECRLSNFLLWQCAYTEFYFIDKFWPDFEKDDLYLAIRNFQQRERRFG 241
>gi|225181374|ref|ZP_03734818.1| undecaprenyl diphosphate synthase [Dethiobacter alkaliphilus AHT 1]
gi|225167955|gb|EEG76762.1| undecaprenyl diphosphate synthase [Dethiobacter alkaliphilus AHT 1]
Length = 254
Score = 217 bits (553), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 106/229 (46%), Positives = 141/229 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA+ RGLPR AGH G+ + +A E+GIK LT++AFS NW R
Sbjct: 24 PQHVAIIMDGNGRWASHRGLPRTAGHHAGMVALRRTIRSADELGIKVLTVYAFSTENWSR 83
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L K FL+ L + N+KV ++G+ L + EA T NTG+
Sbjct: 84 PKREVDFLMRLPKEFLRTDLPELIEKNVKVVMVGSADGLPRHTREAVDEAMAATAQNTGM 143
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY SR EI A+++I + SG + D+D + +L T+D+PDPDL+IR G
Sbjct: 144 ILNFALNYGSRAEIIHAVRDIAEKSASGLISPGDIDEETVDNHLYTADLPDPDLLIRPSG 203
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+FLLWQ+AY+E F YWPDF R A+ Y RDRRFGG+
Sbjct: 204 EIRLSNFLLWQLAYAELWFTDVYWPDFDRGHLLEAIEAYQNRDRRFGGI 252
>gi|254414515|ref|ZP_05028281.1| undecaprenyl diphosphate synthase [Microcoleus chthonoplastes PCC
7420]
gi|196178745|gb|EDX73743.1| undecaprenyl diphosphate synthase [Microcoleus chthonoplastes PCC
7420]
Length = 246
Score = 217 bits (553), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 145/227 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA RG+PR GHR+G++ +++ + GI+ LT +AFS NW R
Sbjct: 18 PKHVAVIMDGNGRWAKRRGIPRIMGHRRGVDTLKQLLRCCDDWGIQALTAYAFSTENWGR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P+ E+ L+ L + L + + + N++++ +GN +L + ++ A QT+ NTG+
Sbjct: 78 PIEEVEFLMTLFERVLIRELKEMMEENVRIQFVGNLTALPQSLQNQIERAMTQTQNNTGI 137
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY R+EI +A + I ++ G + D+D +L +++L T+++ DPDL+IRT G
Sbjct: 138 QFTVATNYGGREEILQACRTIATQVQHGQLQPEDIDEALFSRHLYTANIGDPDLLIRTSG 197
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E RLS+FLLWQ+AY+EF +WPDF RE F AL Y R+RRFG
Sbjct: 198 EMRLSNFLLWQMAYAEFYITDAFWPDFDREAFHQALIAYQKRERRFG 244
>gi|259503116|ref|ZP_05746018.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus antri DSM
16041]
gi|259168982|gb|EEW53477.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus antri DSM
16041]
Length = 259
Score = 217 bits (553), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 104/235 (44%), Positives = 154/235 (65%), Gaps = 3/235 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH++G++ I AA+++G+K LT++AFS NW+R
Sbjct: 25 PRHIAIIMDGNGRWAQKRHLPRVAGHKQGMQTVKTITIAASKLGVKVLTLYAFSTENWKR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE++ L++L F L KNN++V V+G+ L + +A T G+
Sbjct: 85 PSSEVNYLMQLPIRFFSTFVPDLVKNNVRVMVMGDIQRLPAKTQEAVNDAIADTADCDGM 144
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS---DVPDPDLIIR 187
L A NY SRDEI+RA++++ +++G++ +D L++++L T+ ++ DPDL+IR
Sbjct: 145 VLNFALNYGSRDEITRAVQDVACAVQAGTLSPDAIDEQLVSEHLMTAPLGELADPDLLIR 204
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
T GE+R+S+FLLWQ+AYSE F+PE+WPDF E A+ ++ R RRFGGL K
Sbjct: 205 TSGEERISNFLLWQLAYSELEFVPEHWPDFDAESLKRAIVEFQGRHRRFGGLKNK 259
>gi|310659004|ref|YP_003936725.1| undecaprenyl pyrophosphate synthase [Clostridium sticklandii DSM
519]
gi|308825782|emb|CBH21820.1| undecaprenyl pyrophosphate synthase [Clostridium sticklandii]
Length = 242
Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/233 (46%), Positives = 147/233 (63%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S+ P HIGIIMDGNGRWA R LPR GH+ G+E +IV A E+ ++ LT++AFS N
Sbjct: 10 SNIPSHIGIIMDGNGRWAKKRMLPRSFGHKAGVETIRDIVKACNELKVEYLTLYAFSTEN 69
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP E+S L+KL+ +LKK L KNN+++ IG+ L I L E+ ++T+ N
Sbjct: 70 WNRPEEEVSALMKLLLEYLKKETKELDKNNVRINAIGDYSKLPKLIYDELCESIEKTKNN 129
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
TG+ + +A NY SR++I A+KNI + + VD + YL T +PDPDLIIR
Sbjct: 130 TGVVMSLALNYGSRNDIMTAVKNIILEEREKGIDIDSVDEDFMRNYLSTRLLPDPDLIIR 189
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
GE RLS+FL+W+ AY+EF F WPDF RE + A+ Y RDRRFG +S
Sbjct: 190 PSGELRLSNFLMWEAAYAEFWFSDINWPDFKREDLYKAIFDYQNRDRRFGTIS 242
>gi|322517548|ref|ZP_08070417.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
vestibularis ATCC 49124]
gi|322123808|gb|EFX95382.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
vestibularis ATCC 49124]
Length = 249
Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 106/233 (45%), Positives = 147/233 (63%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HIGIIMDGNGRWA R PR GH+ G++ ++ A+++G+K LT++AFS NW R
Sbjct: 17 PNHIGIIMDGNGRWAKKRLQPRVMGHKAGMDALQKVTIEASQLGVKVLTVYAFSTENWSR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ ++ L F K L KNN+++ IG+ L + L L++A +QT+ N+GL
Sbjct: 77 PQDEVKFIMNLPVEFFNKYVPELDKNNVRILTIGDNSRLPKETLDALEKAVEQTKHNSGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI A++ I +++E+G + +D LIAK+L T +P DPDLII
Sbjct: 137 VLNFALNYGGRAEIVSAVQAIAKEVEAGKLSLEAIDEDLIAKHLMTDKLPYLYRDPDLII 196
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSEF F +WPDF + A++ YN R RRFGG+
Sbjct: 197 RTSGELRLSNFLPWQSAYSEFYFTDVFWPDFDHQGLRQAISDYNKRHRRFGGV 249
>gi|323343632|ref|ZP_08083859.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella oralis ATCC
33269]
gi|323095451|gb|EFZ38025.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella oralis ATCC
33269]
Length = 251
Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 100/227 (44%), Positives = 148/227 (65%), Gaps = 2/227 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWAA +G PR GH+ G++ I + +G+K LT++ FS NW R
Sbjct: 12 PRHIAIIMDGNGRWAAEQGKPRSFGHQAGVDTVRRITSECTRLGVKYLTLYTFSTENWNR 71
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EIS L+ L+ S L+ + KNN++ RVIG+ L +D+ L+E E+ T N +
Sbjct: 72 PADEISALMGLVLSSLEDEIF--MKNNVRFRVIGDVSRLPEDVQRKLRETEEHTAANKNM 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ +A +YSSR EI++A+++I ++ +G++ D+D +++ L T+ +PDPDL+IRTGG
Sbjct: 130 TMVVALSYSSRWEIAKAVRHIAKEAVAGNINVDDIDEETVSRELSTNFMPDPDLLIRTGG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S++LLWQ+AYSE F YWPDF +E A+ Y R RR+G
Sbjct: 190 ELRISNYLLWQIAYSELYFCDTYWPDFDKEDLHKAILSYQKRQRRYG 236
>gi|150010269|ref|YP_001305012.1| undecaprenyl pyrophosphate synthetase [Parabacteroides distasonis
ATCC 8503]
gi|256839103|ref|ZP_05544613.1| di-trans,poly-cis-decaprenylcistransferase [Parabacteroides sp.
D13]
gi|298374648|ref|ZP_06984606.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides sp. 3_1_19]
gi|301308356|ref|ZP_07214310.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides sp. 20_3]
gi|149938693|gb|ABR45390.1| undecaprenyl pyrophosphate synthetase [Parabacteroides distasonis
ATCC 8503]
gi|256740022|gb|EEU53346.1| di-trans,poly-cis-decaprenylcistransferase [Parabacteroides sp.
D13]
gi|298269016|gb|EFI10671.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides sp. 3_1_19]
gi|300833826|gb|EFK64442.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides sp. 20_3]
Length = 247
Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 150/232 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA A+G R GH++G+ +I+ A ++G+K LT++ FS NW R
Sbjct: 13 PRHVAIIMDGNGRWAKAKGKDRSFGHQEGVVSVRKIMDAVTQLGLKYLTLYTFSTENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L+ S + + + K N+++ IG+ L +D L+E D T NTG
Sbjct: 73 PEEEVQALMSLLVSAIHRETPDMMKKNVRLTAIGDLSRLREDAYNTLQECIDTTSANTGT 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +YSSR EI+RA + + Q++ + +D+ ++++ +L T ++PDPDL+IRTGG
Sbjct: 133 TLVLALSYSSRWEITRAARQLAQEVLEQKINPNDITEAMVSDHLTTKNIPDPDLLIRTGG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
EKR+S+FLLWQ++Y+EF F +WPDF E + A+ Y R+RRFG S++
Sbjct: 193 EKRISNFLLWQLSYAEFFFTDVFWPDFREEELYEAILYYQQRERRFGKTSEQ 244
>gi|154686070|ref|YP_001421231.1| hypothetical protein RBAM_016370 [Bacillus amyloliquefaciens FZB42]
gi|154351921|gb|ABS74000.1| UppS [Bacillus amyloliquefaciens FZB42]
Length = 260
Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 102/235 (43%), Positives = 148/235 (62%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
++ P HI IIMDGNGRWA R LPR AGH +G++V + A+++G+K LT++AFS
Sbjct: 26 ILKGEIPAHIAIIMDGNGRWAKKRSLPRIAGHHEGMKVVKRVTKLASQLGVKVLTLYAFS 85
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+ L+KL + FL L + N++V++IG+ +L +++A T
Sbjct: 86 TENWKRPKMEVDFLMKLPEEFLNTYLPELIEENVQVKIIGDESALPSHTYRAIEKAVKDT 145
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N GL L A NY R EI A K + + ++SG++ D+D +L + +L T + DP+L
Sbjct: 146 EQNDGLILNFALNYGGRTEIVNAAKALAEQVKSGTLNIEDIDEALFSGHLMTESLQDPEL 205
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE RLS+F+LWQVAYSEFVF WPDF + F A+ ++ R RRFGG+
Sbjct: 206 LIRTSGEIRLSNFMLWQVAYSEFVFTDVLWPDFKEDHFLQAVGEFQQRGRRFGGI 260
>gi|255012462|ref|ZP_05284588.1| undecaprenyl pyrophosphate synthetase [Bacteroides sp. 2_1_7]
gi|262382445|ref|ZP_06075582.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides sp.
2_1_33B]
gi|262295323|gb|EEY83254.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides sp.
2_1_33B]
Length = 247
Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 150/232 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA A+G R GH++G+ +I+ A ++G+K LT++ FS NW R
Sbjct: 13 PRHVAIIMDGNGRWAKAKGKDRSFGHQEGVVSVRKIMDAVTQLGLKYLTLYTFSTENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L+ S + + + K N+++ IG+ L +D L+E D T NTG
Sbjct: 73 PEEEVQALMSLLVSAIHRETPDMMKKNVRLTAIGDLSRLREDAYNTLQECIDMTSANTGT 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +YSSR EI+RA + + Q++ + +D+ ++++ +L T ++PDPDL+IRTGG
Sbjct: 133 TLVLALSYSSRWEITRAARQLAQEVLEQKINPNDITEAMVSDHLTTKNIPDPDLLIRTGG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
EKR+S+FLLWQ++Y+EF F +WPDF E + A+ Y R+RRFG S++
Sbjct: 193 EKRISNFLLWQLSYAEFFFTDVFWPDFREEELYEAILYYQQRERRFGKTSEQ 244
>gi|197336106|ref|YP_002156786.1| undecaprenyl pyrophosphate synthetase 1 [Vibrio fischeri MJ11]
gi|197317596|gb|ACH67043.1| undecaprenyl pyrophosphate synthetase 1 [Vibrio fischeri MJ11]
Length = 257
Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 101/227 (44%), Positives = 151/227 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA A+G PR GH+ G++ + ++AA+++GI +T+FAFS NWRR
Sbjct: 16 PKHIAVIMDGNGRWAKAQGKPRVFGHKAGVDAVRKTISAASKLGINAITLFAFSSENWRR 75
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L + L + L KNNI++R+IG + + EAE T NTGL
Sbjct: 76 PEEEVSVLMELFITVLSREVKRLHKNNIQLRIIGETSQFSSRLQKKIVEAETLTSENTGL 135
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY + +I++A++ + +E G++ + D+D SLIA L SD+P+ DL+IRT G
Sbjct: 136 VLNVAANYGGKWDITQAVRRLAYQVERGNLQADDIDESLIASKLTMSDLPEVDLMIRTSG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+F+LWQ+AY+EF F +YWPDF+ + A+ + R+RRFG
Sbjct: 196 ECRISNFMLWQMAYAEFYFTDQYWPDFNEQSLADAVAWFVSRERRFG 242
>gi|218264482|ref|ZP_03478315.1| hypothetical protein PRABACTJOHN_04015 [Parabacteroides johnsonii
DSM 18315]
gi|218221975|gb|EEC94625.1| hypothetical protein PRABACTJOHN_04015 [Parabacteroides johnsonii
DSM 18315]
Length = 247
Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 98/232 (42%), Positives = 149/232 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA A+G R GH++G+ ++V AA VG+K LT++ FS NW R
Sbjct: 13 PQHVAIIMDGNGRWAKAKGKDRSYGHQEGVVSVRKVVEAATTVGLKYLTMYTFSTENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L+ L+ + + + L KNN+++ IGN L D L++ QT NTG+
Sbjct: 73 PEAEVQALMSLLVAAIHRETPDLMKNNVRLMAIGNLDRLPADAHATLQDCIAQTSANTGV 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +YS+R EI+ A+K + ++ + D+ ++++ +L T +PDPDL+IRTGG
Sbjct: 133 TLILALSYSARWEITEAVKRLAGEVAEKKINPDDITEAVVSDHLTTKGIPDPDLLIRTGG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FLLWQ++Y+EF F YWPDF E + A+ Y R+RRFG S++
Sbjct: 193 EQRVSNFLLWQLSYAEFFFTDVYWPDFREEELYGAILYYQQRERRFGKTSEQ 244
>gi|4768864|gb|AAD29658.1|AF124757_18 unknown [Zymomonas mobilis subsp. mobilis ZM4]
Length = 222
Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 103/222 (46%), Positives = 147/222 (66%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA+AR LPR AGH+KG + V AAAE+GI+ LT++AFS NWRRP SE+++
Sbjct: 1 MDGNGRWASARHLPRIAGHKKGADAVKTTVRAAAEMGIEVLTLYAFSSENWRRPASEVAD 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ L++ L++ +++K+ I ++VIG+ LD D++ +L +A + T NT L L A N
Sbjct: 61 LMGLLRLCLRQEMHNIKERGICLKVIGDYTRLDQDLVALLNQAIEITANNTRLTLVFALN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y ++DE+ K I + + G + ++D I L T D+P DL+IRT GEKRLS+F
Sbjct: 121 YGAQDELVHVTKRIAEKAKEGQLDPENIDVGTIESLLYTHDLPPLDLVIRTSGEKRLSNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
LLWQ AY+E +FI WPDF E A+ +Y R+RR+GGL
Sbjct: 181 LLWQAAYAELLFIDTLWPDFGSETLKAAVEEYARRERRYGGL 222
>gi|242373551|ref|ZP_04819125.1| Di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis M23864:W1]
gi|242348914|gb|EES40516.1| Di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis M23864:W1]
Length = 264
Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 99/232 (42%), Positives = 149/232 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA R +PR GH +G++ +I A+ +GIK LT++AFS NW R
Sbjct: 33 PEHVAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITREASNIGIKYLTLYAFSTENWSR 92
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE++ ++ L +FLK L + N+KV IG L + + A+D+T+ NTGL
Sbjct: 93 PESEVNYIMNLPVNFLKTFLPELIEKNVKVETIGFNNGLPKSTIEAIDYAKDKTKHNTGL 152
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY R EI +++K I++++++ + ++ +D L K+L T + PDP+L+IRT G
Sbjct: 153 TLVFAINYGGRAEIIQSMKEIYEELQTNNQSANAIDEELFNKHLMTHNYPDPELLIRTSG 212
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FL+WQ +YSEF+F + WPDF + Y R RRFGGLS++
Sbjct: 213 EQRISNFLIWQASYSEFIFNEKLWPDFDENELKECIKIYQSRQRRFGGLSEE 264
>gi|257898232|ref|ZP_05677885.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium Com15]
gi|257836144|gb|EEV61218.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium Com15]
Length = 270
Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 105/235 (44%), Positives = 147/235 (62%), Gaps = 4/235 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R LPR AGH++G+E ++ A+ +G+K LT++AFS NW+R
Sbjct: 27 PQHVAIIMDGNGRWAQNRRLPRVAGHKEGMETVKKVTKKASRLGVKVLTLYAFSTENWKR 86
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L F L K N+KV V+G L + +K A +QT+ NTG+
Sbjct: 87 PKDEVSFLMQLPVDFFDTFVPELIKENVKVHVMGYENVLPEHTQDAVKRAIEQTKDNTGM 146
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY SR EI A++NI +++ G + + ++D +IA +L T +P DP+L+I
Sbjct: 147 VLNFALNYGSRAEIVTAVQNIAEEVAKGEIQAEEIDDEVIANHLMTGFLPKELQDPELMI 206
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
RT GE+R+S+FLLWQ+AYSE F WPDF A+ Y RDRRFGG+ K
Sbjct: 207 RTSGEERISNFLLWQIAYSELYFTKALWPDFDGAHLEEAIASYQNRDRRFGGVKK 261
>gi|257884336|ref|ZP_05663989.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium
1,231,501]
gi|257820174|gb|EEV47322.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium
1,231,501]
Length = 270
Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 105/235 (44%), Positives = 147/235 (62%), Gaps = 4/235 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R LPR AGH++G+E ++ A+ +G+K LT++AFS NW+R
Sbjct: 27 PQHVAIIMDGNGRWAQNRRLPRVAGHKEGMETVKKVTKKASRLGVKVLTLYAFSTENWKR 86
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L F L K N+KV V+G L + ++ A +QT+ NTG+
Sbjct: 87 PKDEVSFLMQLPVDFFDTFVPELIKENVKVHVMGYENVLPEHTQDAVRRAIEQTKNNTGM 146
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY SR EI A++ I +++ G + + ++D LIAK+L T +P DP+L+I
Sbjct: 147 VLNFALNYGSRAEIVTAVQEIAEEVAKGEIHAEEIDDELIAKHLMTGFLPKELQDPELMI 206
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
RT GE+R+S+FLLWQ+AYSE F WPDF A+ Y RDRRFGG+ K
Sbjct: 207 RTSGEERISNFLLWQIAYSELYFTKALWPDFDGAHLEEAIASYQNRDRRFGGVKK 261
>gi|325299197|ref|YP_004259114.1| Undecaprenyl pyrophosphate synthase [Bacteroides salanitronis DSM
18170]
gi|324318750|gb|ADY36641.1| Undecaprenyl pyrophosphate synthase [Bacteroides salanitronis DSM
18170]
Length = 246
Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 105/235 (44%), Positives = 145/235 (61%), Gaps = 2/235 (0%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P HI IIMDGNGRWA RG+ R GH+ G E + I AA +G+K LT++ FS N
Sbjct: 10 SRIPAHIAIIMDGNGRWAKQRGMARSYGHQAGAETVHAIAEEAARLGVKYLTLYTFSTEN 69
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W+RP E+S L+ L+ +++ +L KNNI+ R+IG L D+ L + T N
Sbjct: 70 WKRPAEEVSALMSLLMDSIEED--TLMKNNIRFRIIGETEKLPADVFERLNQCIAHTAGN 127
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
TG+ L +A +YSS+ EI+ A+K I +E+ + D+ I ++L T +PDPDL+IR
Sbjct: 128 TGMCLVLALSYSSKWEITEAVKQIASQVENHQLAIADITDQTIDRFLSTRFMPDPDLLIR 187
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE RLS++LLWQ AYSE F +WPDF E F A+ Y R+RRFG S++
Sbjct: 188 TGGEIRLSNYLLWQCAYSELYFCDTFWPDFKEEEFCKAIYDYQQRERRFGKTSEQ 242
>gi|221639122|ref|YP_002525384.1| Undecaprenyl pyrophosphate synthetase [Rhodobacter sphaeroides
KD131]
gi|221159903|gb|ACM00883.1| Undecaprenyl pyrophosphate synthetase [Rhodobacter sphaeroides
KD131]
Length = 247
Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 100/242 (41%), Positives = 149/242 (61%), Gaps = 4/242 (1%)
Query: 2 VASMMSSSPP----DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKN 57
V + PP DH+ IIMDGNGRWA RG PR GHR+G E EIV A+ +GI+
Sbjct: 3 VTEPREADPPPRRADHVAIIMDGNGRWAVDRGWPRLVGHRRGAERVREIVQASPGLGIRW 62
Query: 58 LTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
LT++AFS NW+R E+ L+ + ++++ L K +++R IG+R LD + ++
Sbjct: 63 LTVYAFSTENWKRSTEEVLGLMSIFARYIEREADRLAKEGVRMRFIGDRTRLDAKLQRLM 122
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
E +T+ N LNL +A NY RDE++RA + + QD+ +G + + + D + + LDT+
Sbjct: 123 AGIETRTQHNQRLNLTVAINYGGRDELARAARLMCQDVAAGRLRAEEADEAALVARLDTA 182
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+PDPDL+IRT GE R S+FL WQ AY+E+ F P WPDF+ + ++ R+RRFG
Sbjct: 183 GMPDPDLVIRTSGETRTSNFLSWQSAYAEYEFTPTLWPDFTARELETIIGRFAARERRFG 242
Query: 238 GL 239
G+
Sbjct: 243 GV 244
>gi|148261538|ref|YP_001235665.1| undecaprenyl diphosphate synthase [Acidiphilium cryptum JF-5]
gi|326405027|ref|YP_004285109.1| undecaprenyl pyrophosphate synthetase [Acidiphilium multivorum
AIU301]
gi|146403219|gb|ABQ31746.1| Undecaprenyl pyrophosphate synthetase [Acidiphilium cryptum JF-5]
gi|325051889|dbj|BAJ82227.1| undecaprenyl pyrophosphate synthetase [Acidiphilium multivorum
AIU301]
Length = 254
Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 101/225 (44%), Positives = 143/225 (63%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
HI IIMDGNGRWAA GLPR AGHR+G++ + AA G++ LT+FAFS NWRRPV
Sbjct: 15 HIAIIMDGNGRWAARHGLPRAAGHREGVQAVRRTIEAAIGHGVEWLTLFAFSSENWRRPV 74
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+++L L++ +L+ L + +++ +IG R + L +AE +T N LNL
Sbjct: 75 EEVTDLTFLLRHYLRSELRELAEAGVRLHIIGERDRFGSSLKAELADAEARTAANRKLNL 134
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA +Y +R EI+ A + I + +G++ VD ++ A +L T+ +PDPDL+IRT GE+
Sbjct: 135 VIALSYGARAEIATAARRIAEAAMAGTLDPTTVDETIFAAHLSTAGMPDPDLVIRTSGEQ 194
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RLS+FLLWQ AY+E VF WPDF A+ +Y R+RRFG
Sbjct: 195 RLSNFLLWQAAYAELVFDDALWPDFGAANLGRAIAEYARRERRFG 239
>gi|162147933|ref|YP_001602394.1| undecaprenyl pyrophosphate synthetase [Gluconacetobacter
diazotrophicus PAl 5]
gi|209542551|ref|YP_002274780.1| undecaprenyl diphosphate synthase [Gluconacetobacter diazotrophicus
PAl 5]
gi|161786510|emb|CAP56092.1| putative undecaprenyl pyrophosphate synthetase [Gluconacetobacter
diazotrophicus PAl 5]
gi|209530228|gb|ACI50165.1| undecaprenyl diphosphate synthase [Gluconacetobacter diazotrophicus
PAl 5]
Length = 254
Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 103/228 (45%), Positives = 144/228 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWAAARGLPR AGHR G E + AA G+ LT++AFS NWRR
Sbjct: 23 PAHVAVIMDGNGRWAAARGLPRVAGHRAGAEAVRRCIRAAITRGVGCLTLYAFSSENWRR 82
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+++L L++ +L+ L + +++R+IG+ D D+ + AED T NT L
Sbjct: 83 TPDEVADLTALLRYYLRHKVAELCREGVRIRIIGDLSRFDADVRDEARRAEDMTAANTRL 142
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y R +I +A + SG++ ++D +L +++L T+DVPDPDLI+RT G
Sbjct: 143 TLVLALSYGGRADIVQAAARVAFAARSGTIDPAELDEALFSRFLLTADVPDPDLIVRTSG 202
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E RLS+FLLWQ AY+E VFI WPDF F AL+ + R+RRFG
Sbjct: 203 ECRLSNFLLWQSAYAELVFIETLWPDFDEHHFDAALDMFARRERRFGA 250
>gi|322392573|ref|ZP_08066033.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus peroris
ATCC 700780]
gi|321144565|gb|EFX39966.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus peroris
ATCC 700780]
Length = 250
Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 105/233 (45%), Positives = 145/233 (62%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+IMDGNGRWA R PR GH+ G++ ++ AA+++G+K +T++AFS NW R
Sbjct: 18 PAHIGVIMDGNGRWAKKRMQPRVFGHKAGMDALRKVAIAASDMGVKVMTVYAFSTENWTR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ ++ L F K L + N+K+++IG L LK+AE+ T+LNTGL
Sbjct: 78 PDQEVKFIMNLPVEFYDKYVPELHQKNMKIQMIGETDRLPKQTFNALKKAEELTKLNTGL 137
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI++A+K I +++ G + S D+D LI YL T +P DPDLII
Sbjct: 138 ILNFALNYGGRAEITQALKLIAEEVSDGKISSADIDEELIGDYLFTGHLPREFRDPDLII 197
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSE F WPDF + A+ ++N R+RRFGG+
Sbjct: 198 RTSGELRLSNFLPWQAAYSELYFTDVLWPDFDEQALKEAIAEFNRRNRRFGGV 250
>gi|261407946|ref|YP_003244187.1| undecaprenyl diphosphate synthase [Paenibacillus sp. Y412MC10]
gi|329929291|ref|ZP_08283044.1| di-trans,poly-cis-decaprenylcistransferase [Paenibacillus sp. HGF5]
gi|261284409|gb|ACX66380.1| undecaprenyl diphosphate synthase [Paenibacillus sp. Y412MC10]
gi|328936660|gb|EGG33103.1| di-trans,poly-cis-decaprenylcistransferase [Paenibacillus sp. HGF5]
Length = 255
Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 102/230 (44%), Positives = 145/230 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG+PR GH+ G++ AA E+GIK LT++AFS NW R
Sbjct: 26 PHHVAIIMDGNGRWAKRRGMPRIVGHQNGMKAVKRAAIAADELGIKILTMYAFSTENWTR 85
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL + FL L + N++VR++G+ L + ++EA +T N GL
Sbjct: 86 PKDEVDFLMKLPQEFLAIELEELIEKNVQVRMMGHPEDLPSHTVSAMEEAVAKTAGNDGL 145
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY SR EI+ ++K + +++ G + D+ LI + L T ++PDPDL+IRT G
Sbjct: 146 VLNFALNYGSRKEITESVKALGREVRDGILRPEDITEELIGQRLLTGELPDPDLLIRTSG 205
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E RLS+F+LWQ+AYSE F YWP+F+++ A+ Y R RR+GGLS
Sbjct: 206 ELRLSNFMLWQLAYSELWFTDAYWPEFTKDHLVEAVADYQQRTRRYGGLS 255
>gi|296877240|ref|ZP_06901280.1| Di-trans,poly-cis-decaprenylcistransferase [Streptococcus
parasanguinis ATCC 15912]
gi|296431760|gb|EFH17567.1| Di-trans,poly-cis-decaprenylcistransferase [Streptococcus
parasanguinis ATCC 15912]
Length = 249
Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 107/233 (45%), Positives = 140/233 (60%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA R PR GH+ G+E E+ AA +G++ LT++AFS NW R
Sbjct: 17 PKHIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQEVTIAAKNMGVQVLTVYAFSTENWAR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ ++ L F + L +NN+K+++IG+ L + L L+ AE T LNTGL
Sbjct: 77 PEDEVKFIMHLPVEFYDRFVPELHRNNVKIQMIGDTKKLPKETLEALERAEAMTHLNTGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI++A+K I Q++ D+ +IA YL T +P DPDLII
Sbjct: 137 ILNFALNYGGRAEITQAVKQIAQEVLDAKFSPEDITEEVIADYLYTESLPRILRDPDLII 196
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSE F WPDF E A+ +Y+ R RRFGG+
Sbjct: 197 RTSGEIRLSNFLPWQAAYSELYFTDVMWPDFGEEALRSAVVEYSHRHRRFGGV 249
>gi|228474968|ref|ZP_04059696.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus hominis
SK119]
gi|314936579|ref|ZP_07843926.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus hominis
subsp. hominis C80]
gi|228270953|gb|EEK12341.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus hominis
SK119]
gi|313655198|gb|EFS18943.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus hominis
subsp. hominis C80]
Length = 256
Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 150/232 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R +PR GH +G++ ++ A+ +GIK LT++AFS NW R
Sbjct: 25 PEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKVTRQASHLGIKYLTLYAFSTENWSR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE++ ++ L +FLK L + N+K+ IG ++ + + A+++T+ NTGL
Sbjct: 85 PESEVNYIMNLPVNFLKTFLPELIEKNVKIETIGFLDAVPQSTIEAINYAKEKTKNNTGL 144
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY R E+ +++K+I+ +++ S D+D +I+K+L T PDPDL+IRT G
Sbjct: 145 KLVFAINYGGRAELVQSMKSIYDELQRNGQNSDDIDELMISKHLMTHPYPDPDLLIRTSG 204
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+RLS+FL+WQ +YSEF+F + WPDF E + Y R RRFGGLS++
Sbjct: 205 EQRLSNFLIWQASYSEFIFNEKLWPDFDGEELKQCIKIYQSRQRRFGGLSEE 256
>gi|326803583|ref|YP_004321401.1| di-trans,poly-cis-decaprenylcistransferase [Aerococcus urinae
ACS-120-V-Col10a]
gi|326651238|gb|AEA01421.1| di-trans,poly-cis-decaprenylcistransferase [Aerococcus urinae
ACS-120-V-Col10a]
Length = 246
Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 103/232 (44%), Positives = 151/232 (65%), Gaps = 3/232 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RGL R GH +G++ + AA+++G+K LT++AFS NW+R
Sbjct: 14 PQHVAIIMDGNGRWAKERGLKRTDGHHEGLKAIRRVAVAASQIGVKILTVYAFSTENWKR 73
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE+S L+KL + L +NN++V+++GN+ S+ + ++ A D+T+ NTGL
Sbjct: 74 PRSEVSYLMKLPNLMEAELLPELIENNVQVKIMGNKGSVPKYTIQSIENAIDKTKDNTGL 133
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP---DPDLIIR 187
L IAFNY SR EI A+K I +++SG + +D I+ +L T + DPD +IR
Sbjct: 134 ILNIAFNYGSRAEIVEAVKEIAGEVKSGYLNPDSIDEDTISHHLMTQQLAPYNDPDFLIR 193
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+ GE RLS++LLWQ+AYSE FI WPDF +++F + +Y R RR+GGL
Sbjct: 194 SSGEVRLSNYLLWQLAYSEMYFIDTKWPDFDKKIFLSCIGEYQSRQRRYGGL 245
>gi|157150748|ref|YP_001451120.1| undecaprenyl pyrophosphate synthase [Streptococcus gordonii str.
Challis substr. CH1]
gi|262283496|ref|ZP_06061262.1| undecaprenyl diphosphate synthase [Streptococcus sp. 2_1_36FAA]
gi|157075542|gb|ABV10225.1| undecaprenyl diphosphate synthase [Streptococcus gordonii str.
Challis substr. CH1]
gi|262260987|gb|EEY79687.1| undecaprenyl diphosphate synthase [Streptococcus sp. 2_1_36FAA]
Length = 249
Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 106/233 (45%), Positives = 143/233 (61%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA R PR GH+ G+E + AA E+G++ LT++AFS NW R
Sbjct: 17 PKHIGIIMDGNGRWAKKRLQPRVFGHKAGMEALQNVTIAAKEMGVQVLTVYAFSTENWSR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ ++ L F ++ L KNN+K+++IG+ L L +AE+ T+LNTGL
Sbjct: 77 PEKEVKFIMNLPVEFYERYVPELHKNNVKIQMIGDVARLPKATYDALVKAEELTKLNTGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R E+++AI+NI Q++ D+ +I YL TS +P DPDLII
Sbjct: 137 ILNFALNYGGRAELTQAIRNIAQEVLDAKFNPGDISEEMIGDYLQTSTLPRILRDPDLII 196
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSE F WPDF+ + A+ +Y+ R RRFGG+
Sbjct: 197 RTSGELRLSNFLPWQSAYSELYFTKTLWPDFNEKSLKEAIEEYSKRQRRFGGV 249
>gi|312868157|ref|ZP_07728361.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
parasanguinis F0405]
gi|311096561|gb|EFQ54801.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
parasanguinis F0405]
Length = 249
Score = 216 bits (551), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 108/233 (46%), Positives = 140/233 (60%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA R PR GH+ G+E E+ AA +G++ LT++AFS NW R
Sbjct: 17 PKHIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQEVTIAAKNMGVQVLTVYAFSTENWTR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ ++ L F + L +NN+K+++IG+ L + L L+ AE T+ NTGL
Sbjct: 77 PEDEVKFIMHLPVEFYDRFVPELHRNNVKIQMIGDTKKLPKETLEALERAEAMTQNNTGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI++A+K I Q + V DV +IA YL T +P DPDLII
Sbjct: 137 ILNFALNYGGRAEITQAVKQIAQAVLDAKVSPEDVTEEMIADYLYTESLPQDLRDPDLII 196
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSE F WPDF E A+ +Y+ R RRFGG+
Sbjct: 197 RTSGEIRLSNFLPWQAAYSELYFTDVMWPDFGEEALRSAIVEYSHRHRRFGGV 249
>gi|312871365|ref|ZP_07731461.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners
LEAF 3008A-a]
gi|312872485|ref|ZP_07732554.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners
LEAF 2062A-h1]
gi|312873350|ref|ZP_07733403.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners
LEAF 2052A-d]
gi|311091140|gb|EFQ49531.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners
LEAF 2052A-d]
gi|311092067|gb|EFQ50442.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners
LEAF 2062A-h1]
gi|311093117|gb|EFQ51465.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners
LEAF 3008A-a]
Length = 239
Score = 216 bits (551), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/231 (47%), Positives = 147/231 (63%), Gaps = 3/231 (1%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
DH+ IIMDGNGRWA R LPR GHR G+ EI A E+G++ LT++AFS NW RP
Sbjct: 9 DHLAIIMDGNGRWAQERHLPRIIGHRSGMNKVKEIALVANELGVRVLTLYAFSTENWGRP 68
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E++ L+KL +F K L+KNNI+V ++G L ++K+AE +T N G+
Sbjct: 69 RDEVNYLMKLPINFFDKFMPELQKNNIRVNIMGFNDKLPLATAEIIKKAEQETADNDGMI 128
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS---DVPDPDLIIRT 188
L AFNY SR E++ AI I DI++ + ++ LI+ YL TS D DPDL+IRT
Sbjct: 129 LNFAFNYGSRQEMTAAISKIALDIQNKKIEVDSINEQLISDYLMTSKFGDYADPDLLIRT 188
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE+RLS+F+LWQ+AYSEF F YWPDF+ + F + +Y RDRRFG +
Sbjct: 189 SGEERLSNFMLWQLAYSEFYFTKTYWPDFTTDEFKKIVEEYQHRDRRFGKI 239
>gi|281425930|ref|ZP_06256843.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella oris F0302]
gi|281399823|gb|EFB30654.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella oris F0302]
Length = 247
Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/237 (42%), Positives = 150/237 (63%), Gaps = 2/237 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M AS+ + P HI IIMDGNGRWA+ +G PR GH+ G++ I + A +G+K LT+
Sbjct: 1 MTASLDMTRIPKHIAIIMDGNGRWASEKGKPRSYGHQAGVDAVRRITSEATRLGVKFLTL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW RP EIS L+ L+ + L+ + KNN++ RVIG+R L ++ L+E
Sbjct: 61 YTFSTENWNRPADEISALMGLVLTSLEDEIFM--KNNVRFRVIGDRKRLPAEVEQKLRET 118
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E+ T+ NT + + +A +YS+R EI +A++NI + + D+ +I +L+T+ +P
Sbjct: 119 EEHTKGNTAMTMVVALSYSARWEIVQAMRNILIENTDKPLQPTDITEEMIGHHLETNFMP 178
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DP+L+IRTGGE R+S++LLWQ+AYSE F YWPDF + A+ Y R RRFG
Sbjct: 179 DPELLIRTGGELRISNYLLWQIAYSELYFCDTYWPDFCEDDLQKAIQSYQNRQRRFG 235
>gi|309791082|ref|ZP_07685617.1| undecaprenyl diphosphate synthase [Oscillochloris trichoides DG6]
gi|308226866|gb|EFO80559.1| undecaprenyl diphosphate synthase [Oscillochloris trichoides DG6]
Length = 255
Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 103/232 (44%), Positives = 143/232 (61%), Gaps = 4/232 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA RG PR AGHR G E IV+ ++GI+ LTI+AFS NW R
Sbjct: 27 PTHIAIIMDGNGRWAQQRGQPRMAGHRAGTENIRSIVSECDQIGIRYLTIYAFSTENWNR 86
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++++ F+ + +L +++R +G L + ++ A D T+ NTGL
Sbjct: 87 PTLEVQGLMQILGDFIDRETKNLHAQQVRLRHLGRLNGLSPRLRRKVQHALDLTQHNTGL 146
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +AFNY R +I A + + S V DVD +I+ +L T +PDPD++IRT G
Sbjct: 147 TLAVAFNYGGRADIVDATRELI----SAGVRPEDVDEQMISDHLYTRGMPDPDIVIRTSG 202
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FL+WQ AYSE+ F P WPDF E A+ Y R+RRFGGLS++
Sbjct: 203 ERRISNFLIWQAAYSEYWFTPVLWPDFRAEHIHQAIRDYGRRERRFGGLSEQ 254
>gi|55820295|ref|YP_138737.1| undecaprenyl pyrophosphate synthase [Streptococcus thermophilus LMG
18311]
gi|55822185|ref|YP_140626.1| undecaprenyl pyrophosphate synthase [Streptococcus thermophilus
CNRZ1066]
gi|116627137|ref|YP_819756.1| undecaprenyl pyrophosphate synthetase [Streptococcus thermophilus
LMD-9]
gi|73920281|sp|Q5M1N6|UPPS_STRT1 RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|73920282|sp|Q5M677|UPPS_STRT2 RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|55736280|gb|AAV59922.1| undecaprenyl pyrophosphate synthetase [Streptococcus thermophilus
LMG 18311]
gi|55738170|gb|AAV61811.1| undecaprenyl pyrophosphate synthetase [Streptococcus thermophilus
CNRZ1066]
gi|116100414|gb|ABJ65560.1| Undecaprenyl pyrophosphate synthetase [Streptococcus thermophilus
LMD-9]
gi|312277613|gb|ADQ62270.1| hypothetical protein STND_0198 [Streptococcus thermophilus ND03]
Length = 249
Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 106/233 (45%), Positives = 147/233 (63%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HIGIIMDGNGRWA R PR GH+ G++ ++ A+++G+K LT++AFS NW R
Sbjct: 17 PNHIGIIMDGNGRWAKKRLQPRVMGHKAGMDALQKVTIEASQLGVKVLTVYAFSTENWSR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ ++ L F K L KNN+++ IG+ L + L L++A +QT+ N+GL
Sbjct: 77 PQDEVKFIMNLPVEFFNKYVPELDKNNVRILTIGDNSRLPKETLDALEKAVEQTKHNSGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI A++ I +++E G + +D LIAK+L T +P DPDLII
Sbjct: 137 ILNFALNYGGRAEIVSAVQAIAKEVEIGRLRPEAIDEDLIAKHLMTDKLPYLYRDPDLII 196
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSEF F +WPDF ++ A++ YN R RRFGG+
Sbjct: 197 RTSGELRLSNFLPWQSAYSEFYFTDVFWPDFDQQGLHQAISDYNKRHRRFGGV 249
>gi|332298056|ref|YP_004439978.1| Undecaprenyl pyrophosphate synthase [Treponema brennaborense DSM
12168]
gi|332181159|gb|AEE16847.1| Undecaprenyl pyrophosphate synthase [Treponema brennaborense DSM
12168]
Length = 234
Score = 216 bits (550), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 107/239 (44%), Positives = 151/239 (63%), Gaps = 5/239 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M A++ + P HIGIIMDGNGRWA R LPR GH++G+E +IVAAAA +G+K +T+
Sbjct: 1 MTAAIDMHTVPAHIGIIMDGNGRWAKKRNLPRTFGHKEGLETAKKIVAAAARIGVKYVTL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW+R E+ L+ LI++ L+ F KKN I++R +G+ L ++I + A
Sbjct: 61 YTFSTENWKRTQEEVGFLMNLIQTHLRGEFEFYKKNGIRIRHLGDVSGLPENISKEILLA 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E T TGL + +A NY RDE+ RA K F + S + DV + ++ D ++P
Sbjct: 121 ESDTEQFTGLTVVLAINYGGRDELIRAFKK-FAETRS----AKDVTPEALTEFCDIPELP 175
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
D DLIIRTGGEKRLS+FL+W AY+E VF WPD++ F A+ +Y R+RRFGG+
Sbjct: 176 DADLIIRTGGEKRLSNFLMWHSAYAELVFTDTLWPDYTEREFHDAIAEYRSRNRRFGGI 234
>gi|189502171|ref|YP_001957888.1| hypothetical protein Aasi_0781 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497612|gb|ACE06159.1| hypothetical protein Aasi_0781 [Candidatus Amoebophilus asiaticus
5a2]
Length = 288
Score = 216 bits (550), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 148/232 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI ++MDGNGRWAA +G PR GH ++ E + A E+ I LT+FAFS NW R
Sbjct: 56 PQHIAVMMDGNGRWAAKQGKPRVFGHMSSLQSVEETITACVELNIPYLTLFAFSTENWER 115
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L++L + ++ L +NNIK++VIG+ L + L A T+ N GL
Sbjct: 116 PQEEVNTLMQLFVTTIRDKLQELVENNIKLKVIGDINRLPKECQIALNNAIQATKDNKGL 175
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +YS + +I +A+K + + V D+++ + YL TS++PDPDL+IRTGG
Sbjct: 176 CLIVALSYSGKWDIIQAVKTLAHETLIHKVKPDDINAEIFQHYLSTSEIPDPDLLIRTGG 235
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+ R+S+FLLWQ+AY+E VF+ +YWP+F +E F+ AL Y RDRRFG + +K
Sbjct: 236 DIRISNFLLWQLAYTELVFVDKYWPEFRKEDFYKALINYQQRDRRFGKIIRK 287
>gi|167040293|ref|YP_001663278.1| undecaprenyl pyrophosphate synthase [Thermoanaerobacter sp. X514]
gi|256750777|ref|ZP_05491662.1| undecaprenyl diphosphate synthase [Thermoanaerobacter ethanolicus
CCSD1]
gi|300914377|ref|ZP_07131693.1| undecaprenyl diphosphate synthase [Thermoanaerobacter sp. X561]
gi|307724387|ref|YP_003904138.1| undecaprenyl diphosphate synthase [Thermoanaerobacter sp. X513]
gi|166854533|gb|ABY92942.1| undecaprenyl diphosphate synthase [Thermoanaerobacter sp. X514]
gi|256750360|gb|EEU63379.1| undecaprenyl diphosphate synthase [Thermoanaerobacter ethanolicus
CCSD1]
gi|300889312|gb|EFK84458.1| undecaprenyl diphosphate synthase [Thermoanaerobacter sp. X561]
gi|307581448|gb|ADN54847.1| undecaprenyl diphosphate synthase [Thermoanaerobacter sp. X513]
Length = 249
Score = 216 bits (550), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 108/229 (47%), Positives = 143/229 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA RG+ R GH+ G+ E+V A+ E+GIK LT++AFS NW+R
Sbjct: 21 PIHIGIIMDGNGRWAQKRGMMRFYGHKAGVNAVREVVKASRELGIKYLTLYAFSTENWKR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L+ FL K L KNN+ + IG+ L ++ A++ T+ N+GL
Sbjct: 81 PKEEVNFLMDLLVEFLSKEIDELNKNNVLINFIGDISVLPQKCKIEIERAQNVTKNNSGL 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY RDEI +A+K I I + + ++ I++ L T + PDPDLIIRT G
Sbjct: 141 VLNIALNYGGRDEIVKAVKKICTKILNKELSIEEITEQTISENLYTKNQPDPDLIIRTSG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
EKRLS+FLLWQ AYSE F WPDF +E A+ Y R RRFGG+
Sbjct: 201 EKRLSNFLLWQSAYSELWFTEVLWPDFGKEHLIEAILYYQTRQRRFGGV 249
>gi|269837766|ref|YP_003319994.1| undecaprenyl diphosphate synthase [Sphaerobacter thermophilus DSM
20745]
gi|269787029|gb|ACZ39172.1| undecaprenyl diphosphate synthase [Sphaerobacter thermophilus DSM
20745]
Length = 236
Score = 216 bits (550), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 106/230 (46%), Positives = 146/230 (63%), Gaps = 4/230 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RGLPR AGH G E I AAE+GIK LT++AFS NWRR
Sbjct: 2 PRHVAIIMDGNGRWATRRGLPRIAGHEAGTENIRRITTHAAELGIKYLTLWAFSTENWRR 61
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ +++++ +++ L +N ++R IG+ LD D+ ++EA TR N +
Sbjct: 62 PKEEVEGILQILARSIERETAELHRNGAQLRHIGSLDGLDPDLQQAVREAIALTRNNDRI 121
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +AFNY R EI +AI+ + D V +V L+ +YL T+D+P+PDLIIRT G
Sbjct: 122 VLTLAFNYGGRAEIIQAIRRMIAD----GVRPEEVTEELVDRYLYTADLPEPDLIIRTSG 177
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E+R S+FLLWQ AY+E+ F P WPDF E A++ Y R+RRFGG++
Sbjct: 178 EQRTSNFLLWQAAYAEYHFTPVLWPDFGPEDLERAVDDYCHRERRFGGIT 227
>gi|52080256|ref|YP_079047.1| undecaprenyl pyrophosphate synthase [Bacillus licheniformis ATCC
14580]
gi|52785633|ref|YP_091462.1| hypothetical protein BLi01874 [Bacillus licheniformis ATCC 14580]
gi|319645964|ref|ZP_08000194.1| UppS protein [Bacillus sp. BT1B_CT2]
gi|52003467|gb|AAU23409.1| undecaprenyl pyrophosphate synthetase [Bacillus licheniformis ATCC
14580]
gi|52348135|gb|AAU40769.1| UppS [Bacillus licheniformis ATCC 14580]
gi|317391714|gb|EFV72511.1| UppS protein [Bacillus sp. BT1B_CT2]
Length = 260
Score = 216 bits (550), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 103/236 (43%), Positives = 147/236 (62%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+++ P+HI IIMDGNGRWA R +PR AGH +G++V + A E+G+K LT++AF
Sbjct: 25 NILKGEIPEHIAIIMDGNGRWAKKRAMPRIAGHHEGMKVVRQTTKLANELGVKALTLYAF 84
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP E+ L+KL + FL L + N++VR+ G+R L + +++A
Sbjct: 85 STENWKRPKLEVDFLMKLPEEFLGTYLPELVEENVRVRMTGDREGLPPHTIRAVEKAIRD 144
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T N GL L A NY R EI RA K I ++ + G++ + ++D L + YL T + DPD
Sbjct: 145 TENNDGLILNFALNYGGRAEIVRAAKKIAEEAKKGTLNTEEIDEKLFSDYLMTETLQDPD 204
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
L+IRT GE RLS+F+LWQ+AYSEF+F WPDF A+ +Y R RRFGG+
Sbjct: 205 LLIRTSGEIRLSNFMLWQLAYSEFLFTDVLWPDFKDVHLLQAIGEYQRRGRRFGGI 260
>gi|327460712|gb|EGF07047.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sanguinis
SK1]
Length = 249
Score = 216 bits (550), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 105/233 (45%), Positives = 144/233 (61%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA R PR GH+ G+E ++ AA E+G++ LT++AFS NW R
Sbjct: 17 PKHIAVIMDGNGRWAKKRMQPRVFGHKAGMETLQKVTIAAKEMGVQVLTVYAFSTENWSR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S ++ L F + L KNN+K+++IG+ L L++AE T+LNTGL
Sbjct: 77 PEKEVSFIMNLPVEFYDRYVPELHKNNVKIQMIGDTAKLPKATFEALEKAESLTKLNTGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI++A+K I QD+ + D+ +I YL TS++P DPDL+I
Sbjct: 137 ILNFALNYGGRYEINQAVKEIAQDVLDAKLSPGDITEEVIGNYLYTSNLPKMLRDPDLVI 196
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSE F WPDF + A+ +Y+ R+RRFGG+
Sbjct: 197 RTSGELRLSNFLPWQSAYSELYFTDVLWPDFDEKALKAAIAEYSRRNRRFGGV 249
>gi|261207395|ref|ZP_05922081.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium TC 6]
gi|289566683|ref|ZP_06447100.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
D344SRF]
gi|260078286|gb|EEW65991.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium TC 6]
gi|289161542|gb|EFD09425.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
D344SRF]
Length = 270
Score = 216 bits (550), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 105/235 (44%), Positives = 147/235 (62%), Gaps = 4/235 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH++G+E ++ A+ +G++ LT++AFS NW+R
Sbjct: 27 PQHIAIIMDGNGRWAQNRRLPRVAGHKEGMETVKKVTKKASRLGVRVLTLYAFSTENWKR 86
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L F L K N+KV V+G L + ++ A +QT+ NTG+
Sbjct: 87 PKDEVSFLMQLPVDFFDTFVPELIKENVKVHVMGYENVLPEHTQDAVRRAIEQTKNNTGM 146
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY SR EI A++ I +++ G + + ++D LIAK+L T +P DP+L+I
Sbjct: 147 VLNFALNYGSRAEIVTAVQEIAEEVAKGEIHAEEIDDELIAKHLMTGFLPKELQDPELMI 206
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
RT GE+R+S+FLLWQ+AYSE F WPDF A+ Y RDRRFGG+ K
Sbjct: 207 RTSGEERISNFLLWQIAYSELYFTKALWPDFDGAHLEEAIASYQNRDRRFGGVKK 261
>gi|260459218|ref|ZP_05807473.1| undecaprenyl diphosphate synthase [Mesorhizobium opportunistum
WSM2075]
gi|259034772|gb|EEW36028.1| undecaprenyl diphosphate synthase [Mesorhizobium opportunistum
WSM2075]
Length = 222
Score = 216 bits (550), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 102/210 (48%), Positives = 138/210 (65%)
Query: 30 LPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKG 89
+PR AGHR G+E + V AA ++GI LT++AFS NW RP SE+S+L+ L+K F+++
Sbjct: 1 MPRLAGHRAGVEALRKTVRAAPDLGISFLTVYAFSSENWSRPKSEVSDLMGLLKLFIRRD 60
Query: 90 FYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIK 149
L ++ ++VR+IG+R L DI +L EAE T N L L IAFNY RDEI R +
Sbjct: 61 LADLHQSGVRVRIIGDRTGLQADIRGLLDEAESLTANNEALTLVIAFNYGGRDEIVRTAR 120
Query: 150 NIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVF 209
+ + G + S + + A LDT +PDP+L+IRT GE RLS+FLLWQ AYSE VF
Sbjct: 121 KLASAVARGEIDSEAITAENFAGLLDTQGIPDPELVIRTSGELRLSNFLLWQAAYSELVF 180
Query: 210 IPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+P YWPDF+RE AL ++ R+RRFGGL
Sbjct: 181 LPCYWPDFNREHLAEALREFAGRERRFGGL 210
>gi|94496938|ref|ZP_01303512.1| undecaprenyl diphosphate synthase [Sphingomonas sp. SKA58]
gi|94423614|gb|EAT08641.1| undecaprenyl diphosphate synthase [Sphingomonas sp. SKA58]
Length = 259
Score = 216 bits (550), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/239 (42%), Positives = 153/239 (64%), Gaps = 1/239 (0%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
V + + SP P H+ IIMDGNGRWA R LPR AGHR G+E + AA ++G++ LT+
Sbjct: 21 VDGVAAPSPGPRHVAIIMDGNGRWAKKRLLPRIAGHRAGVEAVRRVARAAQDMGLECLTL 80
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP SE+++L+ L++ F++ N ++++VIG+ +LD ++ +++ A
Sbjct: 81 YAFSSENWKRPASEVADLMGLLRHFIQSDIEEFHANGVRLKVIGDYRALDPSLVTLIEGA 140
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+T N+G + IA NY ++DE+ RA + I Q + G + + D+ + I LDT ++P
Sbjct: 141 MARTAGNSGPVIAIALNYGAQDEMVRAAQRIAQKVARGELAASDIGIADIDNELDTCELP 200
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DL+IRT GE RLS+F+LWQ AY+E F WPDF AL+ + +RDRRFGGL
Sbjct: 201 PLDLLIRTSGELRLSNFMLWQAAYAELYFTDLLWPDFDDRALGQALDAFRMRDRRFGGL 259
>gi|150003439|ref|YP_001298183.1| undecaprenyl pyrophosphate synthase [Bacteroides vulgatus ATCC
8482]
gi|254881262|ref|ZP_05253972.1| undecaprenyl pyrophosphate synthetase [Bacteroides sp. 4_3_47FAA]
gi|294777678|ref|ZP_06743129.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides vulgatus
PC510]
gi|319640264|ref|ZP_07994989.1| undecaprenyl pyrophosphate synthetase [Bacteroides sp. 3_1_40A]
gi|149931863|gb|ABR38561.1| undecaprenyl pyrophosphate synthetase [Bacteroides vulgatus ATCC
8482]
gi|254834055|gb|EET14364.1| undecaprenyl pyrophosphate synthetase [Bacteroides sp. 4_3_47FAA]
gi|294448746|gb|EFG17295.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides vulgatus
PC510]
gi|317388039|gb|EFV68893.1| undecaprenyl pyrophosphate synthetase [Bacteroides sp. 3_1_40A]
Length = 243
Score = 216 bits (550), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 104/235 (44%), Positives = 151/235 (64%), Gaps = 2/235 (0%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P H+ IIMDGNGRWA RG R GH+ G E + I AA +G+K LT++ FS N
Sbjct: 10 SRIPAHVAIIMDGNGRWAKQRGQARSFGHQAGAETVHIIAEEAARLGVKYLTLYTFSTEN 69
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RPV E++ L+ L+ +++ + KNNI R+IG+ L ++L L + ++T +N
Sbjct: 70 WNRPVDEVAALMSLLMDSIEEE--TFMKNNISFRIIGDTAKLPVEVLERLNQCIERTSIN 127
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
TG+ L +A +YSS+ EI+ A++ I I++ + D+D +LI+ +L T+ +PDPDL+IR
Sbjct: 128 TGMCLTLALSYSSKWEITEAVRQIAAKIQNDKLAIEDIDDNLISAHLSTNYMPDPDLLIR 187
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE RLS++LLWQ AYSE F +WPDF E F A+ Y R+RRFG S++
Sbjct: 188 TGGEIRLSNYLLWQCAYSELYFCETFWPDFREEEFCKAIYDYQKRERRFGKTSEQ 242
>gi|171910871|ref|ZP_02926341.1| undecaprenyl-pyrophosphate synthetase [Verrucomicrobium spinosum
DSM 4136]
Length = 237
Score = 216 bits (550), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 102/230 (44%), Positives = 144/230 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RGLPR GHR+G E V + ++GI+ LT++AFS NW+R
Sbjct: 8 PRHVAIIMDGNGRWAKERGLPRTEGHRRGAESVQAAVESCGDLGIEFLTLYAFSTENWKR 67
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE+ L+K+++ FLK+ + K N++++ IG L L ++ + T NTGL
Sbjct: 68 PKSEVDSLMKMLERFLKQKTPDMVKKNVRLQAIGRLHDLPQSCQDQLHKSIEVTSGNTGL 127
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A +Y SR+EI IK++ +E G + +D+ + +K+L T PDPDL+IRT G
Sbjct: 128 TLIFALSYGSREEIIDGIKSLIDSVEKGHLDKGMIDAEVFSKHLYTRYYPDPDLLIRTSG 187
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E RLS+FLLWQ++Y+EF WPDF RE A+ + R RRFGG+S
Sbjct: 188 EMRLSNFLLWQLSYTEFYITQTLWPDFRREQLVEAVRDFGRRQRRFGGVS 237
>gi|168335175|ref|ZP_02693281.1| undecaprenyl diphosphate synthase [Epulopiscium sp. 'N.t.
morphotype B']
Length = 232
Score = 216 bits (550), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 106/227 (46%), Positives = 144/227 (63%), Gaps = 2/227 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IMDGNGRWA ++ LPR AGH+KG E +IV AA + IK +T + FS NW R
Sbjct: 5 PKHVAFIMDGNGRWAKSKKLPRSAGHKKGSETLRDIVEYAATLKIKYITAYTFSTENWSR 64
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S ++ L++ +L KK +IK+RVIG L D I+ +K+ E T+ GL
Sbjct: 65 PKEEVSAIMTLLEDYLDDALKKSKKRDIKIRVIGKLEGLSDSIIHKIKKLELITKDKPGL 124
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ A NY RDEI RA K I + + G++ ++ + A++LDT +VPDPD +IRT G
Sbjct: 125 CVIFAINYGGRDEIVRATKIIAEKFKQGTIT--EITEEVFAQFLDTGNVPDPDFLIRTSG 182
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R S+FL WQ+AYSEF F ++WPDFS+E F AL +Y R RRFG
Sbjct: 183 ELRTSNFLPWQLAYSEFYFTDKHWPDFSKEDFDLALLEYANRKRRFG 229
>gi|293570619|ref|ZP_06681670.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
E980]
gi|291609290|gb|EFF38561.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
E980]
Length = 270
Score = 216 bits (550), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 105/235 (44%), Positives = 146/235 (62%), Gaps = 4/235 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R LPR AGH++G+E ++ A+ +G+K LT++AFS NW+R
Sbjct: 27 PQHVAIIMDGNGRWAQNRRLPRVAGHKEGMETVKKVTKKASRLGVKVLTLYAFSTENWKR 86
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L F L K N+KV V+G L + +K A +QT+ NTG+
Sbjct: 87 PKDEVSFLMQLPVDFFDTFVPELIKENVKVHVMGYENVLPEHTQDAVKRAIEQTKDNTGM 146
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY SR EI A++ I +++ G + + ++D LIA +L T +P DP+L+I
Sbjct: 147 VLNFALNYGSRAEIVTAVQKIAEEVAKGEIQAEEIDDELIANHLMTGFLPKELQDPELMI 206
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
RT GE+R+S+FLLWQ+AYSE F WPDF A+ Y RDRRFGG+ K
Sbjct: 207 RTSGEERISNFLLWQIAYSELYFTKALWPDFDGAHLEEAIASYQNRDRRFGGVKK 261
>gi|329114466|ref|ZP_08243228.1| Undecaprenyl pyrophosphate synthase [Acetobacter pomorum DM001]
gi|326696542|gb|EGE48221.1| Undecaprenyl pyrophosphate synthase [Acetobacter pomorum DM001]
Length = 246
Score = 216 bits (550), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/228 (43%), Positives = 143/228 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA RGLPR AGHR G E V AA + G+ LT++AFS NW R
Sbjct: 13 PTHVAVIMDGNGRWARERGLPRLAGHRAGAEAVARCVRAAMQRGVAYLTLYAFSSENWAR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+S+L L++ +L+ L K +++R IG+ DD + L +AE TR N+ L
Sbjct: 73 GQEEVSDLTGLLRYYLRHKVRELHKEGVRLRFIGDLARFDDSLREELAQAESLTRGNSKL 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y R +I +A + + Q+++ G + + S+ + +L TS VPDPD+++RT G
Sbjct: 133 TLILALSYGGRLDIVQAAQRLAQEVKDGRIAPEQITESVFSNFLWTSGVPDPDVVVRTSG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E RLS+FLLWQ AY+E VF+ +WPDF+ F L+QY R+RRFG
Sbjct: 193 ECRLSNFLLWQSAYAELVFLNVFWPDFNERHFAMVLDQYAQRERRFGA 240
>gi|319401450|gb|EFV89660.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis FRI909]
Length = 256
Score = 216 bits (550), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 148/232 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA R +PR GH +G++ +I A+++GIK LT++AFS NW R
Sbjct: 25 PEHVAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITREASDLGIKYLTLYAFSTENWSR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE++ ++ L +FLK L + N+K+ IG L + + A+ +T+ NTGL
Sbjct: 85 PESEVNYIMNLPVNFLKTFLPELIEKNVKIETIGFYEGLPQSTINAIDFAKAKTQQNTGL 144
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY R EI +++K I+ +++ S +D +LI ++L T PDPDL+IRT G
Sbjct: 145 TLVFAINYGGRAEIIQSMKTIYNELQLNGQGSEVIDEALIKRHLMTHSYPDPDLLIRTSG 204
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FL+WQV+YSEF+F + WPDF + L Y R RRFGGLS++
Sbjct: 205 EQRISNFLIWQVSYSEFIFNEKLWPDFDEKELRECLKIYQSRQRRFGGLSEE 256
>gi|209695847|ref|YP_002263777.1| undecaprenyl pyrophosphate synthetase [Aliivibrio salmonicida
LFI1238]
gi|208009800|emb|CAQ80107.1| undecaprenyl pyrophosphate synthetase [Aliivibrio salmonicida
LFI1238]
Length = 257
Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 101/227 (44%), Positives = 153/227 (67%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA A+G PR GH+ G++ + ++AA+++GI +T+FAFS NWRR
Sbjct: 16 PKHIAVIMDGNGRWAKAQGKPRVFGHKAGVDAVRKTISAASKLGINAITLFAFSSENWRR 75
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L + L + L KNNI++RVIGN + + EAE T N+GL
Sbjct: 76 PEEEVSVLMELFITVLSREVKRLHKNNIQLRVIGNTSQFSSRLQKKILEAEALTLENSGL 135
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY + +I++A++ + +E G++ + +++ +LIA L SD+PD DL+IRT G
Sbjct: 136 VLNIAANYGGKWDITQAVQRLAYQVEQGNLQADNINEALIASKLTMSDLPDVDLMIRTSG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+F+LWQ+AY+EF F +YWPDF+ + +A+ + R+RRFG
Sbjct: 196 ECRISNFMLWQMAYAEFYFTDQYWPDFNEQSLANAVAWFVSRERRFG 242
>gi|163849098|ref|YP_001637142.1| undecaprenyl diphosphate synthase [Chloroflexus aurantiacus
J-10-fl]
gi|222527071|ref|YP_002571542.1| undecaprenyl diphosphate synthase [Chloroflexus sp. Y-400-fl]
gi|163670387|gb|ABY36753.1| undecaprenyl diphosphate synthase [Chloroflexus aurantiacus
J-10-fl]
gi|222450950|gb|ACM55216.1| undecaprenyl diphosphate synthase [Chloroflexus sp. Y-400-fl]
Length = 241
Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 105/233 (45%), Positives = 144/233 (61%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA RGLPR AGHR G E IV A +G++ LT++AFS NW R
Sbjct: 13 PQHIAVIMDGNGRWAQQRGLPRIAGHRAGTENIRPIVTECARIGVRVLTLYAFSTENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++++ F+ + +L N+ +R +G L + + A + TR NTGL
Sbjct: 73 PSLEVQGLMQILGEFIDREIQNLHAQNVHLRHLGRLSGLSPHLREKVNYAIELTRHNTGL 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IAFNY R +I A++ I + SG + + + +I+ +L T +PDPD+IIRT G
Sbjct: 133 TLAIAFNYGGRADIVDAVRAI---VASG-IPADQITDEVISAHLSTHGLPDPDMIIRTSG 188
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
E+RLS+FL+WQ AYSE+ F P +WPDF E A+ Y R+RRFGGL K G
Sbjct: 189 ERRLSNFLIWQSAYSEYWFTPVFWPDFRPEHLHQAILDYGRRERRFGGLPKPG 241
>gi|293374699|ref|ZP_06621007.1| di-trans,poly-cis-decaprenylcistransferase [Turicibacter sanguinis
PC909]
gi|292646613|gb|EFF64615.1| di-trans,poly-cis-decaprenylcistransferase [Turicibacter sanguinis
PC909]
Length = 254
Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 98/238 (41%), Positives = 151/238 (63%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ + P HI II+DGNGRWA RGLPR AGH++G EI ++G+K LT++AF
Sbjct: 15 QILKAPLPQHIAIILDGNGRWAKKRGLPRTAGHQEGAMNVREITKLCGKLGVKALTVYAF 74
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP E+ L+KL F + L +N+I+++VIGN L ++ ++E Q
Sbjct: 75 STENWKRPEEEVKFLMKLPLKFFDEFAPELIENDIRLKVIGNTEDLPTELQEKIRELSHQ 134
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N + L IA NY S+DEI +A++ I +++++G + ++ +I +L T D+P D
Sbjct: 135 TKDNQTMTLTIALNYGSQDEIKQAVQQIAKEVKAGELKVEEITEDVIENHLMTHDLPPLD 194
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
L+IRT GE+R+S++LLWQ+AY+E F WPDF + A+ Y R+RRFGGL++
Sbjct: 195 LMIRTSGEQRISNYLLWQLAYAELYFTSVAWPDFKENQLYEAIYDYQKRNRRFGGLTE 252
>gi|310816030|ref|YP_003963994.1| undecaprenyl diphosphate synthase [Ketogulonicigenium vulgare Y25]
gi|308754765|gb|ADO42694.1| undecaprenyl diphosphate synthase [Ketogulonicigenium vulgare Y25]
Length = 251
Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 145/229 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG PR GHR G +IV A ++G+K LTIFAFS NW+R
Sbjct: 21 PQHVAIIMDGNGRWAKLRGRPRLFGHRAGARRVRDIVQACPQLGVKYLTIFAFSTENWKR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
+E++ L+ + K ++ +L + VR IG+RL L+ + ++ + E T N +
Sbjct: 81 TQTEVAGLMGMFKRYIMNEAKTLHNAGVCVRFIGDRLRLEPSLQRLMNDLEALTAGNDTV 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L IA NY RDE++RA++ + ++ G + DV S + +LDT +PDPDL+IRT G
Sbjct: 141 HLTIAINYGGRDEVTRAVQRMAVEVADGRLHPQDVTSDTLTAFLDTHVLPDPDLVIRTSG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+FLLWQ AY+E+ FI WPDF+ + F + ++ RDRRFGG+
Sbjct: 201 EARISNFLLWQSAYAEYEFIDTLWPDFTPDEFARVIGRFAARDRRFGGV 249
>gi|6136145|sp|O82827|UPPS_MICLU RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|3358087|dbj|BAA31993.1| undecaprenyl diphosphate synthase [Micrococcus luteus]
Length = 249
Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 103/229 (44%), Positives = 147/229 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA + +PR GH +G++ +I A+++G+K LT++AFS NW R
Sbjct: 21 PKHIAIIMDGNGRWAKQKKMPRIKGHYEGMQTVKKITRYASDLGVKYLTLYAFSTENWSR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+KL FL L + N+KV IG L D + EA+++T+ NTGL
Sbjct: 81 PKDEVNYLMKLPGDFLNTFLPELIEKNVKVETIGFIDDLPDHTKKAVLEAKEKTKHNTGL 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY R EI A++ I + +SG + ++ + +YL T+++PDP+L+IRT G
Sbjct: 141 TLVFALNYGGRKEIISAVQLIAERYKSGEISLDEISETHFNEYLFTANMPDPELLIRTSG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+RLS+FL+WQ +YSEFVFI E+WPDF+ E ++ Y R RRFGGL
Sbjct: 201 EERLSNFLIWQCSYSEFVFIDEFWPDFNEESLAQCISIYQNRHRRFGGL 249
>gi|156975502|ref|YP_001446409.1| undecaprenyl diphosphate synthase [Vibrio harveyi ATCC BAA-1116]
gi|156527096|gb|ABU72182.1| hypothetical protein VIBHAR_03233 [Vibrio harveyi ATCC BAA-1116]
Length = 251
Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 102/231 (44%), Positives = 148/231 (64%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S S P HI IIMDGNGRWA ++G PR GH+KG+ + VAAA+++GIK +T+FAFS
Sbjct: 8 SDSLPKHIAIIMDGNGRWAKSKGKPRVFGHKKGVNAVRKTVAAASKLGIKAMTLFAFSSE 67
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+ L++L S L L KNN+++RVIG+ + + + EAE T
Sbjct: 68 NWRRPEEEVGLLMELFISVLSSEVKKLHKNNLRLRVIGDTSRFSERLQGKIAEAEALTAN 127
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTG+ + IA NY + +I+ A K + +G + D++ LI ++L +D+P+ DL+I
Sbjct: 128 NTGMVINIAANYGGKWDITEAAKTLALKARNGEIRVEDINEQLITQHLTMADLPEVDLLI 187
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE R+S+F+LWQ+AY+E F PEYWP+F + A+ + R+RRFG
Sbjct: 188 RTSGECRISNFMLWQMAYAEMYFTPEYWPEFGEDSLVEAVTWFINRERRFG 238
>gi|281417719|ref|ZP_06248739.1| undecaprenyl diphosphate synthase [Clostridium thermocellum JW20]
gi|281409121|gb|EFB39379.1| undecaprenyl diphosphate synthase [Clostridium thermocellum JW20]
Length = 252
Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 104/237 (43%), Positives = 145/237 (61%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A++ S P HI IIMDGNGRWA R LPR GHR+G ++ EI E+GIK LT++A
Sbjct: 16 ANIDYSKLPTHIAIIMDGNGRWAKKRALPRSMGHREGAKILKEITTFCGEIGIKYLTVYA 75
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW+RP SE+ L+ L+ +LK + +++++VIG+ DD+I +
Sbjct: 76 FSTENWKRPKSEVDALMSLLLDYLKNAETHIGGKDVRIQVIGDTSVFDDEIKKEIDRVTK 135
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T N GL L IA NY SR EI A K + +++ G + D++ ++ L T+ +PDP
Sbjct: 136 LTSKNNGLILNIALNYGSRAEIVHAAKRMAKEVLEGKLKPDDINEEVLNDRLYTAKIPDP 195
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DL+IR GGEKRLS+FLLWQ AY+E + WPDF +E A+ Y R+RRFGG+
Sbjct: 196 DLLIRPGGEKRLSNFLLWQSAYTELWYTDVLWPDFKKEHIVEAILDYQRRNRRFGGI 252
>gi|332664450|ref|YP_004447238.1| Undecaprenyl pyrophosphate synthase [Haliscomenobacter hydrossis
DSM 1100]
gi|332333264|gb|AEE50365.1| Undecaprenyl pyrophosphate synthase [Haliscomenobacter hydrossis
DSM 1100]
Length = 248
Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 103/231 (44%), Positives = 141/231 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA G PR GHR G++ E AAAE+G+K LT++AFS NW R
Sbjct: 13 PQHIAIIMDGNGRWAKQHGQPRVFGHRNGVKAVRETTEAAAELGVKYLTLYAFSTENWGR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L+ L K +L KNNI++ IG+ L L + TR NT +
Sbjct: 73 PKFEVDALMTLLVDTLHKEIATLNKNNIRLEAIGDLSKLPGSTHRALLDGIANTRTNTRM 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NYS++ EI A + + ++ G + D++ + A L T +PDP+L+IRT G
Sbjct: 133 TLVLALNYSAKWEILEASRQMAALVKDGKMEIEDINEATFANALSTKGIPDPELLIRTSG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E RLS+FLLWQ+AY+EF F P WPDF +E FF A+ + R+RRFG + +
Sbjct: 193 ENRLSNFLLWQLAYAEFYFTPTLWPDFHKEHFFQAIIDFQNRERRFGKIEE 243
>gi|13786808|pdb|1F75|A Chain A, Crystal Structure Of Undecaprenyl Diphosphate Synthase
From Micrococcus Luteus B-P 26
gi|13786809|pdb|1F75|B Chain B, Crystal Structure Of Undecaprenyl Diphosphate Synthase
From Micrococcus Luteus B-P 26
Length = 249
Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 103/229 (44%), Positives = 147/229 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA + +PR GH +G++ +I A+++G+K LT++AFS NW R
Sbjct: 21 PKHIAIIMDGNGRWAKQKKMPRIKGHYEGMQTVRKITRYASDLGVKYLTLYAFSTENWSR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+KL FL L + N+KV IG L D + EA+++T+ NTGL
Sbjct: 81 PKDEVNYLMKLPGDFLNTFLPELIEKNVKVETIGFIDDLPDHTKKAVLEAKEKTKHNTGL 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY R EI A++ I + +SG + ++ + +YL T+++PDP+L+IRT G
Sbjct: 141 TLVFALNYGGRKEIISAVQLIAERYKSGEISLDEISETHFNEYLFTANMPDPELLIRTSG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+RLS+FL+WQ +YSEFVFI E+WPDF+ E ++ Y R RRFGGL
Sbjct: 201 EERLSNFLIWQCSYSEFVFIDEFWPDFNEESLAQCISIYQNRHRRFGGL 249
>gi|332365815|gb|EGJ43572.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sanguinis
SK355]
Length = 249
Score = 215 bits (548), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 105/233 (45%), Positives = 144/233 (61%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA R PR GH+ G+E ++ AA E+G++ LT++AFS NW R
Sbjct: 17 PKHIAVIMDGNGRWAKKRMQPRVFGHKAGMETLQKVTIAAKEMGVQVLTVYAFSTENWSR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S ++ L F + L KNN+K+++IG+ L L++AE T+LNTGL
Sbjct: 77 PEKEVSFIMNLPVEFYDRYVPELHKNNVKIQMIGDTAKLPKATFEALEKAESLTKLNTGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI++A+K I QD+ + D+ +I YL TS++P DPDL+I
Sbjct: 137 ILNFALNYGGRYEINQAVKEIAQDVLDAKLSPGDITEDIIGNYLYTSNLPKMLRDPDLVI 196
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSE F WPDF + A+ +Y+ R+RRFGG+
Sbjct: 197 RTSGELRLSNFLPWQSAYSELYFTDILWPDFDEKALKAAIAEYSRRNRRFGGV 249
>gi|95928704|ref|ZP_01311450.1| undecaprenyl diphosphate synthase [Desulfuromonas acetoxidans DSM
684]
gi|95135049|gb|EAT16702.1| undecaprenyl diphosphate synthase [Desulfuromonas acetoxidans DSM
684]
Length = 235
Score = 215 bits (548), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 146/229 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA RGLPR AGH++G+ +V + +GI+ LT++AFS NW R
Sbjct: 4 PEHIAIIMDGNGRWAQRRGLPRIAGHQQGVSTVRSVVEECSTLGIRYLTLYAFSSENWSR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L+ +L L K+ I+ RVIG+ L +I L++ ++T N GL
Sbjct: 64 PDDEVQSLMALLGQYLSSELPLLLKHCIRFRVIGDLSRLPQEIRASLEQTINETSDNPGL 123
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y SRDE+ RA++++ D+++G++ D+ + + YLDT +PDPDL+IRT G
Sbjct: 124 TLTLALSYGSRDEVLRAVRHLASDVKNGNLSEDDISEEVFSGYLDTQGIPDPDLLIRTSG 183
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+FLLWQ+AY+E F WPDF+ AL + R RRFG +
Sbjct: 184 EMRISNFLLWQLAYTELYFCSCLWPDFTVVELKEALADFESRIRRFGAV 232
>gi|325686589|gb|EGD28615.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sanguinis
SK72]
gi|325695489|gb|EGD37389.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sanguinis
SK150]
Length = 249
Score = 215 bits (548), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 105/233 (45%), Positives = 145/233 (62%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA R PR GH+ G+E ++ AA E+G++ LT++AFS NW R
Sbjct: 17 PKHIAVIMDGNGRWAKKRMQPRVFGHKAGMETLQKVTIAAKEMGVQVLTVYAFSTENWSR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S ++ L F + L KNN+K+++IG+ L + L++AE T+LNTGL
Sbjct: 77 PEKEVSFIMNLPVEFYDRYVPELHKNNVKIQMIGDTAKLPEATFEALEKAESLTKLNTGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI++A+K I QD+ + D+ +I YL TS++P DPDL+I
Sbjct: 137 ILNFALNYGGRYEINQAVKLIAQDVLDAKLSPGDITEEVIGNYLYTSNLPKMLRDPDLVI 196
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSE F WPDF + A+ +Y+ R+RRFGG+
Sbjct: 197 RTSGELRLSNFLPWQSAYSELYFTDILWPDFDEKALKAAIAEYSRRNRRFGGV 249
>gi|42525111|ref|NP_970491.1| undecaprenyl pyrophosphate synthetase [Bdellovibrio bacteriovorus
HD100]
gi|39577322|emb|CAE81145.1| undecaprenyl pyrophosphate synthetase [Bdellovibrio bacteriovorus
HD100]
Length = 244
Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 104/230 (45%), Positives = 146/230 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA + PR GH KG V +I+ A + GIKNLT++AFS NW R
Sbjct: 4 PKHIAIIMDGNGRWAQLKRRPRTFGHIKGTRVAKKIITACSRRGIKNLTLYAFSTENWFR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ ++ +LK+ +L K NI+ VIG+ L D+ ++++ + T TGL
Sbjct: 64 PQEEVSLLMLILSRYLKRETENLVKENIRFSVIGDLSRLPLDVANAIEKSIEATSQCTGL 123
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL A +Y SR EI++A+++I + + +G + ++D S+I L T PDPDLIIRT G
Sbjct: 124 NLVFALSYGSRQEITQAVRDIAEKVAAGEISPAEIDESVINSALSTFPTPDPDLIIRTSG 183
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E+RLS+FLLWQ AYSEF F WP+F+ AL + +R RR+G +S
Sbjct: 184 EQRLSNFLLWQAAYSEFYFTEVLWPNFTESHLDEALQAFAMRQRRYGKVS 233
>gi|91216697|ref|ZP_01253662.1| undecaprenyl diphosphate synthase [Psychroflexus torquis ATCC
700755]
gi|91185166|gb|EAS71544.1| undecaprenyl diphosphate synthase [Psychroflexus torquis ATCC
700755]
Length = 245
Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 151/232 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +GL R GH KG + E V ++AE+GI+NLT++AFS NW R
Sbjct: 13 PKHVAIIMDGNGRWAKKQGLMRVRGHEKGTKAVRETVESSAELGIENLTLYAFSTENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EI L++L+ S LK +L+ N I+++ IG +L LKE ++T N+ +
Sbjct: 73 PKLEIQTLMRLLVSSLKDEIKTLQDNKIRLQAIGCIENLPTKAKKELKEVIEKTANNSRM 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y +R+E+ +A+K I Q +++ + S +D S I +L T ++PD D++IRT G
Sbjct: 133 TLTLALSYGAREEMIQAVKQISQKVKNNIIDSETIDESTINNHLYTRNLPDVDMMIRTSG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FLLWQ+AY+E F WPDF +E F A+ +Y R+RRFG S++
Sbjct: 193 EQRISNFLLWQMAYAELYFTETLWPDFRKENLFEAIYEYQKRERRFGKTSEQ 244
>gi|325840623|ref|ZP_08167104.1| di-trans,poly-cis-decaprenylcistransferase [Turicibacter sp. HGF1]
gi|325490272|gb|EGC92605.1| di-trans,poly-cis-decaprenylcistransferase [Turicibacter sp. HGF1]
Length = 254
Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 97/238 (40%), Positives = 151/238 (63%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ + P HI II+DGNGRWA RGLPR AGH++G EI ++G+K LT++AF
Sbjct: 15 QILKAPLPQHIAIILDGNGRWAKKRGLPRTAGHQEGAMNVREITKLCGKLGVKALTVYAF 74
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP E+ L+KL F + L +N+I++++IGN L ++ ++E Q
Sbjct: 75 STENWKRPEEEVKFLMKLPLKFFDEFAPELIENDIRLKIIGNTEDLPTELQEKIRELSHQ 134
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N + L IA NY S+DEI +A++ I +++++G + ++ +I +L T D+P D
Sbjct: 135 TKDNQTMTLTIALNYGSQDEIKQAVQQIAKEVKAGELKVEEITEDVIENHLMTHDLPPLD 194
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
L+IRT GE+R+S++LLWQ+AY+E F WPDF + A+ Y R+RRFGGL++
Sbjct: 195 LMIRTSGEQRISNYLLWQLAYAELYFTSVAWPDFKENQLYEAIYDYQKRNRRFGGLTE 252
>gi|322388630|ref|ZP_08062230.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus infantis
ATCC 700779]
gi|321140550|gb|EFX36055.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus infantis
ATCC 700779]
Length = 250
Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 109/241 (45%), Positives = 146/241 (60%), Gaps = 7/241 (2%)
Query: 6 MSSSP---PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
++ SP P HIG+IMDGNGRWA R PR GH+ G++ + AA+++G+K LT++A
Sbjct: 10 VTESPAVVPAHIGVIMDGNGRWAKKRMQPRVFGHKAGMDALRTVAIAASDMGVKALTVYA 69
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RP E+ ++ L F K L + N+K+++IG L + LK+AE
Sbjct: 70 FSTENWTRPDQEVKFIMNLPVEFYDKYVPELHQKNMKIQMIGETDRLPNQTFEALKKAEK 129
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP-- 180
T+LNTGL L A NY R EI++A+K I QD+ V D+ LI +YL T +P
Sbjct: 130 LTKLNTGLILNFALNYGGRAEITQAVKLIAQDVLDAKVNPGDITEELIGEYLFTGHLPKT 189
Query: 181 --DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DPDLIIRT GE RLS+FL WQ AYSE F WPDF E A+ ++N R+RRFGG
Sbjct: 190 LRDPDLIIRTSGELRLSNFLPWQAAYSELYFTDVLWPDFDEEALKEAIAEFNRRNRRFGG 249
Query: 239 L 239
+
Sbjct: 250 V 250
>gi|312864055|ref|ZP_07724291.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
vestibularis F0396]
gi|311100468|gb|EFQ58675.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
vestibularis F0396]
Length = 249
Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 105/233 (45%), Positives = 146/233 (62%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HIGIIMDGNGRWA R PR GH+ G++ ++ A+++G+K LT++AFS NW R
Sbjct: 17 PNHIGIIMDGNGRWAKKRLQPRVMGHKAGMDSLQKVTIEASQLGVKVLTVYAFSTENWSR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ ++ L F K L KNN+++ IG+ L + L L++A +QT+ N+GL
Sbjct: 77 PQDEVKFIMNLPVEFFNKYVPELDKNNVRILTIGDNSRLPKETLDALEKAVEQTKHNSGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI A++ I +++E+G + +D LIAK+L T +P DPDLII
Sbjct: 137 ILNFALNYGGRAEIVSAVQAIAKEVEAGKLSPEAIDEDLIAKHLMTDKLPYLYRDPDLII 196
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSE F +WPDF + A++ YN R RRFGG+
Sbjct: 197 RTSGELRLSNFLPWQSAYSELYFTDVFWPDFDHQGLRQAISDYNKRHRRFGGV 249
>gi|323350537|ref|ZP_08086199.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sanguinis
VMC66]
gi|322123219|gb|EFX94904.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sanguinis
VMC66]
Length = 249
Score = 215 bits (547), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 105/233 (45%), Positives = 143/233 (61%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA R PR GH+ G+E + AA E+G++ LT++AFS NW R
Sbjct: 17 PKHIAVIMDGNGRWAKKRMQPRVFGHKAGMETLQRVTIAAKEMGVQVLTVYAFSTENWSR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S ++ L F + L KNN+K+++IG+ L L++AE T+LNTGL
Sbjct: 77 PEKEVSFIMNLPVEFYDRYVPELHKNNVKIQMIGDTAKLPKATFEALEKAESLTKLNTGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI++A+K I QD+ + D+ +I YL TS++P DPDL+I
Sbjct: 137 ILNFALNYGGRYEINQAVKEIAQDVLDAKLSPGDITEDIIGNYLYTSNLPKMLRDPDLVI 196
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSE F WPDF + A+ +Y+ R+RRFGG+
Sbjct: 197 RTSGELRLSNFLPWQSAYSELYFTDILWPDFDEKALKAAIAEYSRRNRRFGGV 249
>gi|59712565|ref|YP_205341.1| undecaprenyl pyrophosphate synthase [Vibrio fischeri ES114]
gi|73920285|sp|Q5E3E3|UPPS_VIBF1 RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|59480666|gb|AAW86453.1| undecaprenyl pyrophosphate synthase [Vibrio fischeri ES114]
Length = 257
Score = 215 bits (547), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 100/227 (44%), Positives = 150/227 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA A+G PR GH+ G++ + ++AA+++GI +T+FAFS NWRR
Sbjct: 16 PKHIAVIMDGNGRWAKAQGKPRVFGHKAGVDAVRKTISAASKLGINAITLFAFSSENWRR 75
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L + L + L KNNI++R+IG + + EAE T NTGL
Sbjct: 76 PEEEVSVLMELFITVLSREVKRLHKNNIQLRIIGETSQFSSRLQKKIVEAETLTSENTGL 135
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY + +I++A++ + +E G++ + D+D LIA L SD+P+ DL+IRT G
Sbjct: 136 VLNVAANYGGKWDITQAVRRLAYQVERGNLQADDIDEDLIASKLTMSDLPEVDLMIRTSG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+F+LWQ+AY+EF F +YWPDF+ + A+ + R+RRFG
Sbjct: 196 ECRISNFMLWQMAYAEFYFTDQYWPDFNEQSLADAVAWFVSRERRFG 242
>gi|313891152|ref|ZP_07824771.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pseudoporcinus SPIN 20026]
gi|313120515|gb|EFR43635.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pseudoporcinus SPIN 20026]
Length = 249
Score = 215 bits (547), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 108/231 (46%), Positives = 140/231 (60%), Gaps = 4/231 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA R PR GH+ G++ E+ A++ G+K LT++AFS NW R
Sbjct: 17 PKHIGIIMDGNGRWAKKRLKPRVFGHKAGMDALQEVTLTASKYGVKVLTVYAFSTENWAR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ ++ L F K L KNN+++++IG L + L LK A + TR N+GL
Sbjct: 77 PQDEVKFIMNLPVEFFDKYVPELNKNNVRIQMIGETHRLPAETLNALKRAIETTRKNSGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI+ A++ I QD+ ++ D+ LIA YL T +P +PDLII
Sbjct: 137 VLNFALNYGGRAEITSAVRMIAQDVLDANLNPGDITEELIANYLMTDHLPYLYRNPDLII 196
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE RLS+FL WQ AYSEF F WPDF R F AL +Y+ R RRFG
Sbjct: 197 RTSGELRLSNFLPWQSAYSEFYFTSVLWPDFKRAEFIKALEEYSRRQRRFG 247
>gi|83647913|ref|YP_436348.1| undecaprenyl diphosphate synthase [Hahella chejuensis KCTC 2396]
gi|83635956|gb|ABC31923.1| undecaprenyl diphosphate synthase [Hahella chejuensis KCTC 2396]
Length = 274
Score = 215 bits (547), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 100/233 (42%), Positives = 148/233 (63%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
++ +S P H+ IIMDGN RWA R LP AGH+ G++ +V A G++ LT+FAFS
Sbjct: 8 LVGTSKPRHVAIIMDGNNRWAKQRRLPGVAGHKAGVDSVRAVVETCARHGVEVLTLFAFS 67
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRRP E+ L++L L++ L +NNI++R+IG+R + + +++AE T
Sbjct: 68 SENWRRPEEEVGALMRLFLVALQREVRKLNRNNIRLRIIGDRSKFNSTLQQHMQDAEGLT 127
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NTG+ L IA NY +I++A ++I + +E G + + D+D LI +Y++ D+P PDL
Sbjct: 128 AGNTGMTLAIAANYGGHWDITQAARHIAEKVERGELRAADIDDHLIQQYVELGDLPPPDL 187
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRT GE+R+S+FLLWQ+AY+E F +WPDF E AL Y+ R RRFG
Sbjct: 188 CIRTAGEQRISNFLLWQLAYTELYFAEVFWPDFRTEQMELALAAYSHRKRRFG 240
>gi|153808973|ref|ZP_01961641.1| hypothetical protein BACCAC_03274 [Bacteroides caccae ATCC 43185]
gi|149128306|gb|EDM19525.1| hypothetical protein BACCAC_03274 [Bacteroides caccae ATCC 43185]
Length = 244
Score = 215 bits (547), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 145/232 (62%), Gaps = 2/232 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG R GH G E +I AA +GIK LT++ FS NW R
Sbjct: 13 PQHVAIIMDGNGRWAKQRGKERTYGHHAGAETVQKITEDAARLGIKYLTLYTFSTENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L+ +++ +L KNN++ +VIG+ + L D+ LK + T NTG+
Sbjct: 73 PQKEVSALMNLLLDSIEEE--TLMKNNLRFQVIGDFMKLPADVQASLKACIEHTVHNTGM 130
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +YSSR EI+ A + I +++G + + I+ +L T+ +PDPDL+IRTGG
Sbjct: 131 CLVLALSYSSRWEITEAARQIAAQVKAGEISPEQITDEYISSHLSTNFMPDPDLLIRTGG 190
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E RLS+++LWQ AYSE F +WPDF E + A+ +Y R+RRFG S++
Sbjct: 191 EIRLSNYMLWQCAYSELYFCDTFWPDFDNEELYKAICEYQQRERRFGKTSEQ 242
>gi|294056527|ref|YP_003550185.1| undecaprenyl diphosphate synthase [Coraliomargarita akajimensis DSM
45221]
gi|293615860|gb|ADE56015.1| undecaprenyl diphosphate synthase [Coraliomargarita akajimensis DSM
45221]
Length = 246
Score = 215 bits (547), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 104/237 (43%), Positives = 148/237 (62%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + +S+ P H+ IIMDGNGRWA RGLPR GHR+G + + AA ++G++ LT+
Sbjct: 1 MKPNSRASNSPRHVAIIMDGNGRWAQQRGLPRIEGHRRGADAVKRALKAAQQLGVEYLTL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS+ NW RP EI L++L+ FL LKK I++RV+G L + I L+ A
Sbjct: 61 YAFSVENWNRPKDEIDGLMRLLDRFLVDQLKELKKRKIRLRVVGRYQELPEHIQQRLRTA 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E +T + T L +A NY +R E+ A+K + IE+G C D++ + +++L T D+P
Sbjct: 121 EAETAMYTDHTLALALNYGARTELIDAVKAQYAAIEAGEQCIDDLNYTQFSQHLYTRDMP 180
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DPDLIIRT GE RLS+FLL Q AY+E +WPDFS F A+ Y+ R+RR+G
Sbjct: 181 DPDLIIRTSGECRLSNFLLLQAAYAEIHITDIFWPDFSESDFEAAIADYHSRERRYG 237
>gi|194335582|ref|YP_002017376.1| undecaprenyl diphosphate synthase [Pelodictyon phaeoclathratiforme
BU-1]
gi|194308059|gb|ACF42759.1| undecaprenyl diphosphate synthase [Pelodictyon phaeoclathratiforme
BU-1]
Length = 282
Score = 215 bits (547), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 99/232 (42%), Positives = 150/232 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA +G R GH G+E ++V + +++GI+ LT+F FS NW+R
Sbjct: 40 PNHIAIIMDGNGRWARLKGKTRIEGHVAGVESVRDVVESCSQLGIRYLTLFTFSTENWKR 99
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L+ + + L NNI++ VIG L + + VL + + T+ N+ L
Sbjct: 100 PEKEVSALMQLLVKVIGRETRKLHDNNIRLNVIGEMEILPEKVRSVLTKTMELTKNNSKL 159
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA +YS + ++++A + I D+++G + + VD L+A YL TS +PDPDL+IRT G
Sbjct: 160 MLNIALSYSGQWDLTQACQAIAFDVQAGRINAESVDEHLLASYLSTSSIPDPDLLIRTSG 219
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+F+LWQ AYSE F YWPDF R + A+ ++ R+RRFG S++
Sbjct: 220 EFRISNFMLWQCAYSEIFFTNTYWPDFHRSQLYEAVREFQSRERRFGQTSEQ 271
>gi|324992480|gb|EGC24401.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sanguinis
SK405]
gi|327472433|gb|EGF17864.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sanguinis
SK408]
Length = 249
Score = 215 bits (547), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 105/233 (45%), Positives = 144/233 (61%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA R PR GH+ G+E + AA E+G++ LT++AFS NW R
Sbjct: 17 PKHIAVIMDGNGRWAKKRMQPRVFGHKAGMETLQRVTIAAKEMGVQVLTVYAFSTENWSR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S ++ L F + L KNN+K+++IG+ L + L++AE T+LNTGL
Sbjct: 77 PEKEVSFIMNLPVEFYDRYVPELHKNNVKIQMIGDTAKLPEATFEALEKAESLTKLNTGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI++A+K I QD+ + D+ +I YL TS++P DPDL+I
Sbjct: 137 ILNFALNYGGRYEINQAVKLIAQDVLDAKLSPGDITEEVIGNYLYTSNLPKMLRDPDLVI 196
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSE F WPDF + A+ +Y+ R+RRFGG+
Sbjct: 197 RTSGELRLSNFLPWQSAYSELYFTDILWPDFDEKALKAAIAEYSRRNRRFGGV 249
>gi|296132873|ref|YP_003640120.1| undecaprenyl diphosphate synthase [Thermincola sp. JR]
gi|296031451|gb|ADG82219.1| undecaprenyl diphosphate synthase [Thermincola potens JR]
Length = 259
Score = 215 bits (547), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 106/239 (44%), Positives = 147/239 (61%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++A++ + P HI IIMDGNGRWAA RGLPR AGHR G+E +IV + +GIK LT+
Sbjct: 21 LLAAIDMNKLPMHIAIIMDGNGRWAARRGLPRAAGHRAGVESLRDIVKTCSSLGIKYLTV 80
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E++ L+ L+ +L K L +NN+KVR IG L L +A
Sbjct: 81 YAFSTENWKRPQEEVNILMDLLVEYLGKEMRELHQNNVKVRAIGRIEELPASAQKALSDA 140
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ T NTGL L +A NY R EI A++ I ++ G + +D ++ ++L T +P
Sbjct: 141 FELTGNNTGLTLTLALNYGGRLEIVEAVQKIAGEVLKGRLDLKAIDEKVVNEHLYTVGMP 200
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IR GE R+S+FLLWQ+AYSE + P WP F + A+ + R RRFGGL
Sbjct: 201 DPDLVIRPSGELRISNFLLWQMAYSELWYSPVLWPSFRKVHLLQAIIDFQKRQRRFGGL 259
>gi|125973516|ref|YP_001037426.1| undecaprenyl pyrophosphate synthetase [Clostridium thermocellum
ATCC 27405]
gi|256003334|ref|ZP_05428325.1| undecaprenyl diphosphate synthase [Clostridium thermocellum DSM
2360]
gi|125713741|gb|ABN52233.1| Undecaprenyl pyrophosphate synthetase [Clostridium thermocellum
ATCC 27405]
gi|255992624|gb|EEU02715.1| undecaprenyl diphosphate synthase [Clostridium thermocellum DSM
2360]
gi|316940244|gb|ADU74278.1| undecaprenyl diphosphate synthase [Clostridium thermocellum DSM
1313]
Length = 252
Score = 215 bits (547), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 103/232 (44%), Positives = 142/232 (61%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P HI IIMDGNGRWA R LPR GHR+G ++ EI E+GIK LT++AFS N
Sbjct: 21 SKLPTHIAIIMDGNGRWAKKRALPRSMGHREGAKILKEITTFCGEIGIKYLTVYAFSTEN 80
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W+RP SE+ L+ L+ +LK + +++++VIG+ DD+I + T N
Sbjct: 81 WKRPKSEVDALMSLLLDYLKNAETHIGGKDVRIQVIGDTSVFDDEIKKEIDRVTKLTSKN 140
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
GL L IA NY SR EI A K + +++ G + D++ ++ L T+ +PDPDL+IR
Sbjct: 141 NGLILNIALNYGSRAEIVHAAKRMAKEVLEGKLKPDDINEEVLNDRLYTAKIPDPDLLIR 200
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GGEKRLS+FLLWQ AY+E + WPDF +E A+ Y R+RRFGG+
Sbjct: 201 PGGEKRLSNFLLWQSAYTELWYTDVLWPDFKKEHIVEAILDYQRRNRRFGGI 252
>gi|39997015|ref|NP_952966.1| undecaprenyl pyrophosphate synthase [Geobacter sulfurreducens PCA]
gi|42559732|sp|P60482|UPPS_GEOSL RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|39983903|gb|AAR35293.1| undecaprenyl diphosphate synthase [Geobacter sulfurreducens PCA]
gi|298506032|gb|ADI84755.1| undecaprenyl diphosphate synthase [Geobacter sulfurreducens KN400]
Length = 246
Score = 215 bits (547), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 106/232 (45%), Positives = 144/232 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R L R GH+KG+E IV + +GI LT+FAFS NW R
Sbjct: 10 PRHLAIIMDGNGRWAQERMLTRIIGHQKGVETVRIIVEECSRLGIGYLTLFAFSAENWLR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L+ L+K ++ + NNI+ VIGNR L D+ ++ A D+T NTG+
Sbjct: 70 PKTEVKALMALLKKYIASEAARMDANNIRFNVIGNRDELPPDVNKAVQGAIDRTSGNTGM 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y +R EI A I DI SG + + D+ + A YL TS +PDPD +IRT G
Sbjct: 130 ILTLALSYGARQEIMTAATRIASDIASGVLKADDLSETAFASYLFTSGLPDPDFLIRTSG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AY+EF F WP+F+ E + AL+ Y R+RRFG S +
Sbjct: 190 EMRISNFLLWQLAYTEFYFSSVNWPEFTPEELYRALSDYQARERRFGRTSAQ 241
>gi|319745863|gb|EFV98153.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
agalactiae ATCC 13813]
Length = 239
Score = 215 bits (547), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 108/233 (46%), Positives = 142/233 (60%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA R PR GH+ G++ E+ AA+E+G+K LT++AFS NW R
Sbjct: 7 PAHIGIIMDGNGRWAKKRLKPRVMGHKAGMDALQEVTIAASELGVKVLTVYAFSTENWSR 66
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ ++ L F K L KNN++V+VIG+ L ++ A +T+ N+GL
Sbjct: 67 PDDEVKFIMNLPVEFFDKYVPELDKNNVRVQVIGDTHKLPKATYDAMQRACLRTKHNSGL 126
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI+ AIK I QD+ + D+ L+A +L T+ +P DPDLII
Sbjct: 127 VLNFALNYGGRSEITNAIKEIAQDVLEAKLNPDDITEDLVANHLMTNSLPYLYRDPDLII 186
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSEF F P WPDF ++ A+ YN R RRFG +
Sbjct: 187 RTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKDELHKAIVDYNQRHRRFGSV 239
>gi|237725971|ref|ZP_04556452.1| undecaprenyl pyrophosphate synthetase [Bacteroides sp. D4]
gi|265753004|ref|ZP_06088573.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides sp.
3_1_33FAA]
gi|229435779|gb|EEO45856.1| undecaprenyl pyrophosphate synthetase [Bacteroides dorei 5_1_36/D4]
gi|263236190|gb|EEZ21685.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides sp.
3_1_33FAA]
Length = 243
Score = 215 bits (547), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 104/235 (44%), Positives = 150/235 (63%), Gaps = 2/235 (0%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P H+ IIMDGNGRWA RG R GH+ G E + I AA +G+K LT++ FS N
Sbjct: 10 SRIPAHVAIIMDGNGRWAKQRGQARSFGHQAGAETVHIIAEEAARLGVKYLTLYTFSTEN 69
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RPV E++ L+ L+ +++ + KNNI R+IG+ L ++L L + + T +N
Sbjct: 70 WNRPVDEVAALMSLLMDSIEEE--TFMKNNISFRIIGDTAKLPVEVLERLNQCIEHTSIN 127
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
TG+ L +A +YSS+ EI+ A++ I I++ + D+D +LI+ +L T+ +PDPDL+IR
Sbjct: 128 TGMCLTLALSYSSKWEITEAVRQITIKIQNNKLAIDDIDDNLISAHLSTNYMPDPDLLIR 187
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE RLS++LLWQ AYSE F +WPDF E F A+ Y R+RRFG S++
Sbjct: 188 TGGEIRLSNYLLWQCAYSELYFCETFWPDFREEEFCKAIYDYQKRERRFGKTSEQ 242
>gi|256820184|ref|YP_003141463.1| undecaprenyl diphosphate synthase [Capnocytophaga ochracea DSM
7271]
gi|256581767|gb|ACU92902.1| undecaprenyl diphosphate synthase [Capnocytophaga ochracea DSM
7271]
Length = 240
Score = 215 bits (547), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 102/238 (42%), Positives = 151/238 (63%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M ++ P H+ IIMDGNGRWA +GL R GH KG++ ++V E I LT+FAFS
Sbjct: 1 MEITNYPKHLAIIMDGNGRWAKKQGLLRAYGHEKGVQTVRQVVEYCVEHRIPYLTLFAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+ L++L+ FLKK +L KNN++++ IGN L + D+
Sbjct: 61 TENWKRPALEVKALMELLVKFLKKEVDNLHKNNVRLKTIGNLDRFPPKPREALLASIDKL 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NTGL L +A NY +R+EI AIK I ++ G++ ++ + + + K+L T D+PD DL
Sbjct: 121 KNNTGLTLTLALNYGAREEILTAIKEIAAKVKEGTLIANTITETTLQKHLYTYDLPDVDL 180
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IRT GE+R+S+FLLWQ+AY+E F WPDF+++ AL+ Y R+RRFG S++
Sbjct: 181 LIRTSGEERISNFLLWQIAYAELYFTEVLWPDFTKKHLEEALSNYQNRERRFGKTSEQ 238
>gi|145220335|ref|YP_001131044.1| undecaprenyl pyrophosphate synthetase [Prosthecochloris
vibrioformis DSM 265]
gi|145206499|gb|ABP37542.1| Undecaprenyl pyrophosphate synthetase [Chlorobium phaeovibrioides
DSM 265]
Length = 281
Score = 215 bits (547), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 150/232 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA +G R GH G+ +IV A+AE+GI++LT+F FS NW+R
Sbjct: 40 PSHIAIIMDGNGRWARLKGKTRVEGHAAGVNSVRDIVEASAELGIEHLTLFTFSTENWKR 99
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L++LI L + +L+ NNI+++VIGNR L + L+ + T+ N+ L
Sbjct: 100 PEKEVAALMQLIVRILGRETRALQDNNIRLQVIGNRELLPLKVRETLENTIELTKNNSSL 159
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA +YS + +I +A + + + +E+G + + +V+ LI +L T+ +PDP+LIIRT G
Sbjct: 160 TLTIALSYSGKWDIVQACRTVAEAVEAGRITADEVNEQLIESHLSTAGIPDPELIIRTSG 219
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+F++WQ AYSE F YWPDF R + A+ + R+RRFG S +
Sbjct: 220 EFRISNFMIWQSAYSEIYFTNTYWPDFRRANLYEAIRDFQGRERRFGKTSDQ 271
>gi|254421690|ref|ZP_05035408.1| undecaprenyl diphosphate synthase [Synechococcus sp. PCC 7335]
gi|196189179|gb|EDX84143.1| undecaprenyl diphosphate synthase [Synechococcus sp. PCC 7335]
Length = 261
Score = 215 bits (547), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 103/230 (44%), Positives = 146/230 (63%), Gaps = 1/230 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA R LPR AGHR+G V +++ + GI+ LT +AFS NW+R
Sbjct: 17 PKHVAVIMDGNGRWANQRCLPRVAGHRQGARVLKDLLRCCKDWGIEALTAYAFSTENWKR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L+ L + LKK ++ + ++VR IG+ +L + + A ++T NT +
Sbjct: 77 PTTEVDFLMVLFEKMLKKELMAMHQEGVRVRFIGDLSALPPILQKEMNLAVEETANNTAI 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ +A NY SR EI+ A + I Q +E G+V + +V +IA++L T DPDL+IRT G
Sbjct: 137 DFNVAVNYGSRSEITMACQQIAQKVEQGAVTACEVTEDMIAEHLYTQG-SDPDLLIRTSG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E+RLS+FLLWQ+AY+E VF +WPDF R F AL Y RDRRFG S
Sbjct: 196 EQRLSNFLLWQLAYTEMVFTDAFWPDFDRAQFHRALLIYQRRDRRFGNAS 245
>gi|294677164|ref|YP_003577779.1| di-trans,poly-cis-decaprenylcistransferase [Rhodobacter capsulatus
SB 1003]
gi|294475984|gb|ADE85372.1| di-trans,poly-cis-decaprenylcistransferase [Rhodobacter capsulatus
SB 1003]
Length = 250
Score = 214 bits (546), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 96/227 (42%), Positives = 143/227 (62%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ +IMDGNGRWA RG PR GHRKG E EIV A ++G+K LT++AFS NW+R
Sbjct: 22 HVAMIMDGNGRWAKQRGWPRLVGHRKGAERVKEIVRACPDLGVKWLTLYAFSTENWKRST 81
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+ L+ L ++++ ++ +++R IG+R LD + ++ E +T +N LNL
Sbjct: 82 EEVLGLMALFARYIQREADAMSAEGVRMRFIGDRGPLDGKLRGLMDGIEARTAMNARLNL 141
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A NY RDE+ RA +I Q++ +G + + ++ A +LDT+ +PDPDL+IR+ GE
Sbjct: 142 TVAINYGGRDELRRAAVSIAQEVAAGRLAPEAITEAVFAGHLDTAAIPDPDLVIRSSGET 201
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
R S+FL WQ AY+E+ F P WPDF+ L Q+ R+RRFGG+
Sbjct: 202 RTSNFLPWQAAYAEYDFTPTLWPDFNPAALAAILAQFGGRERRFGGV 248
>gi|76787788|ref|YP_330469.1| undecaprenyl pyrophosphate synthase [Streptococcus agalactiae A909]
gi|77405648|ref|ZP_00782736.1| undecaprenyl diphosphate synthase [Streptococcus agalactiae H36B]
gi|77412295|ref|ZP_00788610.1| undecaprenyl diphosphate synthase [Streptococcus agalactiae CJB111]
gi|76562845|gb|ABA45429.1| undecaprenyl diphosphate synthase [Streptococcus agalactiae A909]
gi|77161642|gb|EAO72638.1| undecaprenyl diphosphate synthase [Streptococcus agalactiae CJB111]
gi|77175721|gb|EAO78502.1| undecaprenyl diphosphate synthase [Streptococcus agalactiae H36B]
Length = 250
Score = 214 bits (546), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 108/233 (46%), Positives = 142/233 (60%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA R PR GH+ G++ E+ AA+E+G+K LT++AFS NW R
Sbjct: 18 PAHIGIIMDGNGRWAKKRLKPRVMGHKAGMDALQEVTIAASELGVKVLTVYAFSTENWSR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ ++ L F K L KNN++V+VIG+ L ++ A +T+ N+GL
Sbjct: 78 PDDEVKFIMNLPVEFFDKYVPELDKNNVRVQVIGDTHKLPKATYDAMQRACLRTKHNSGL 137
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI+ AIK I QD+ + D+ L+A +L T+ +P DPDLII
Sbjct: 138 VLNFALNYGGRSEITNAIKEIAQDVLEAKLNPDDITEDLVANHLMTNSLPYLYRDPDLII 197
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSEF F P WPDF ++ A+ YN R RRFG +
Sbjct: 198 RTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKDELHKAIVDYNQRHRRFGSV 250
>gi|326204056|ref|ZP_08193917.1| undecaprenyl diphosphate synthase [Clostridium papyrosolvens DSM
2782]
gi|325985823|gb|EGD46658.1| undecaprenyl diphosphate synthase [Clostridium papyrosolvens DSM
2782]
Length = 251
Score = 214 bits (546), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 99/230 (43%), Positives = 148/230 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI II DGNGRWA R LPR GH++G ++V ++VG+K+LT++AFS NW+R
Sbjct: 21 PQHIAIIPDGNGRWAKKRSLPRNVGHKEGSMTLKKVVIYCSKVGVKHLTVYAFSTENWKR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE+ L+ L+ FL+ L +N+++RVIG+ L +++ + E T +N GL
Sbjct: 81 PQSEVDALMGLLLEFLRNAERELAGSNVRIRVIGDINGLPEELQNEIARVEKMTSINNGL 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL IA NY SR EI A+K I ++I+ G + D+D + + ++L T +P+PDL+IRT G
Sbjct: 141 NLNIALNYGSRFEILYAVKKIAKEIKDGKLSIDDIDENQMEQHLYTKGIPEPDLLIRTSG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E+R+S++LLWQ AY+EF F WPDF+ A+ + R+RR+GG+
Sbjct: 201 EQRISNYLLWQCAYTEFWFTDTLWPDFNESHIAEAIKAFEKRNRRYGGIE 250
>gi|269960595|ref|ZP_06174967.1| Undecaprenyl diphosphate synthase [Vibrio harveyi 1DA3]
gi|269834672|gb|EEZ88759.1| Undecaprenyl diphosphate synthase [Vibrio harveyi 1DA3]
Length = 251
Score = 214 bits (546), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 102/231 (44%), Positives = 148/231 (64%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S S P HI IIMDGNGRWA ++G PR GH+KG+ + VAAA+++GIK +T+FAFS
Sbjct: 8 SDSLPKHIAIIMDGNGRWAKSKGKPRVFGHKKGVNAVRKTVAAASKLGIKAMTLFAFSSE 67
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+ L++L S L L KNN+++RVIG+ + + + EAE T
Sbjct: 68 NWRRPEEEVGLLMELFISVLSSEVKKLHKNNLRLRVIGDTSRFSERLQGKIIEAEALTAG 127
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTG+ + IA NY + +I+ A K + +G + D++ LI ++L +D+P+ DL+I
Sbjct: 128 NTGMVINIAANYGGKWDITEAAKTLALKARNGEIRVEDINEQLITQHLTMADLPEVDLLI 187
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE R+S+F+LWQ+AY+E F PEYWP+F + A+ + R+RRFG
Sbjct: 188 RTSGECRISNFMLWQMAYAEMYFTPEYWPEFDEDSLVEAVTWFINRERRFG 238
>gi|167037632|ref|YP_001665210.1| undecaprenyl pyrophosphate synthase [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320116047|ref|YP_004186206.1| undecaprenyl diphosphate synthase [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|326389446|ref|ZP_08211013.1| undecaprenyl diphosphate synthase [Thermoanaerobacter ethanolicus
JW 200]
gi|166856466|gb|ABY94874.1| undecaprenyl diphosphate synthase [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319929138|gb|ADV79823.1| undecaprenyl diphosphate synthase [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|325994451|gb|EGD52876.1| undecaprenyl diphosphate synthase [Thermoanaerobacter ethanolicus
JW 200]
Length = 249
Score = 214 bits (546), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 143/229 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA RG+ R GH+ G+ E+V A+ E+GIK LT++AFS NW+R
Sbjct: 21 PIHIGIIMDGNGRWAQKRGMMRFYGHKAGVNAVREVVKASRELGIKYLTLYAFSTENWKR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L+ +L K L KNN+ + IG+ L + + A++ T+ N+GL
Sbjct: 81 PKEEVNFLMDLLVEYLSKEVDELNKNNVLINFIGDISVLPEKCKIEIDRAQNVTKNNSGL 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY RDEI +A+K I I + + ++ I++ L T + PDPDLIIRT G
Sbjct: 141 VLNIALNYGGRDEIVKAVKKICTKILNKELSIEEITEQTISENLYTKNQPDPDLIIRTSG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
EKRLS+FLLWQ AYSE F WPDF +E A+ Y R RRFGG+
Sbjct: 201 EKRLSNFLLWQSAYSELWFTEVLWPDFGKEHLIEAILYYQTRQRRFGGV 249
>gi|324995990|gb|EGC27901.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sanguinis
SK678]
gi|325697429|gb|EGD39315.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sanguinis
SK160]
Length = 249
Score = 214 bits (546), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 105/233 (45%), Positives = 144/233 (61%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA R PR GH+ G+E ++ AA E+G++ LT++AFS NW R
Sbjct: 17 PKHIAVIMDGNGRWAKKRMQPRVFGHKAGMETLQKVTIAAKEMGVQVLTVYAFSTENWSR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S ++ L F + L KNN+K+++IG+ L L++AE T+LNTGL
Sbjct: 77 PEKEVSFIMNLPVEFYDRYVPELHKNNVKIQMIGDTAKLPKATFEALEKAESLTKLNTGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI++A+K I QD+ + D+ +I YL TS++P DPDL+I
Sbjct: 137 ILNFALNYGGRYEINQAVKLIAQDVLDAKLSPGDITEEVIGNYLYTSNLPKMLRDPDLVI 196
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSE F WPDF + A+ +Y+ R+RRFGG+
Sbjct: 197 RTSGELRLSNFLPWQSAYSELYFTDILWPDFDEKALKAAIAEYSRRNRRFGGV 249
>gi|254228395|ref|ZP_04921821.1| undecaprenyl diphosphate synthase [Vibrio sp. Ex25]
gi|262393523|ref|YP_003285377.1| undecaprenyl pyrophosphate synthetase [Vibrio sp. Ex25]
gi|151938983|gb|EDN57815.1| undecaprenyl diphosphate synthase [Vibrio sp. Ex25]
gi|262337117|gb|ACY50912.1| undecaprenyl pyrophosphate synthetase [Vibrio sp. Ex25]
Length = 251
Score = 214 bits (546), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 101/231 (43%), Positives = 149/231 (64%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S S P HI IIMDGNGRWA ++G PR GH+KG+ + VAAA+++GIK +T+FAFS
Sbjct: 8 SDSLPKHIAIIMDGNGRWAKSKGKPRVFGHKKGVNAVRKTVAAASKLGIKAMTLFAFSSE 67
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+ L++L + L L KNN+++RVIG+ + + + EAE+ T
Sbjct: 68 NWRRPEEEVGLLMELFITVLSSEVKKLHKNNLRLRVIGDTSRFSERLQKKIVEAENLTAG 127
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTG+ + IA NY + +I+ A K + +G + D++ LI ++L +D+P+ DL+I
Sbjct: 128 NTGMVINIAANYGGKWDITEAAKTLALKARNGEIRVEDINEQLITEHLTMADLPEVDLLI 187
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE R+S+F+LWQ+AY+E F PEYWP+F + A+ + R+RRFG
Sbjct: 188 RTSGECRISNFMLWQMAYAEMYFTPEYWPEFDEDSLVEAVTWFINRERRFG 238
>gi|291459116|ref|ZP_06598506.1| di-trans,poly-cis-decaprenylcistransferase [Oribacterium sp. oral
taxon 078 str. F0262]
gi|291418370|gb|EFE92089.1| di-trans,poly-cis-decaprenylcistransferase [Oribacterium sp. oral
taxon 078 str. F0262]
Length = 261
Score = 214 bits (546), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 103/231 (44%), Positives = 143/231 (61%), Gaps = 3/231 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI II+DGNGRWA RGLPR GH+KG E IV A +GI LT++ FS NW+R
Sbjct: 10 PAHIAIILDGNGRWAKRRGLPRAMGHKKGCETLERIVEDCARLGISYLTVYGFSTENWKR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L++L + ++KK +NN++ R+IG+R DI +++ E +T NTG+
Sbjct: 70 PPEEVAALMQLFRIYMKKLIKVANENNVRARMIGSREGFARDIREGIEDLERETAKNTGM 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL---IAKYLDTSDVPDPDLIIR 187
A NY SRDEI RA+K S +++S ++ LDT+ +PDPDL+IR
Sbjct: 130 CFVFAVNYGSRDEIIRAVKKYTIQALSEGRSREEIESLTEDDFSRLLDTAGMPDPDLVIR 189
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
T GE RLS++LLWQ AYSE+ P WPDF +E A++ + R+RRFGG
Sbjct: 190 TSGEFRLSNYLLWQCAYSEYYISPVLWPDFDKEELLRAIDSFRKRERRFGG 240
>gi|220927900|ref|YP_002504809.1| undecaprenyl diphosphate synthase [Clostridium cellulolyticum H10]
gi|219998228|gb|ACL74829.1| undecaprenyl diphosphate synthase [Clostridium cellulolyticum H10]
Length = 251
Score = 214 bits (546), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 100/230 (43%), Positives = 149/230 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI II DGNGRWA RGLPR GHR+G ++V + +G+K+LTI+AFS NW+R
Sbjct: 21 PKHIAIIPDGNGRWAKKRGLPRNVGHREGSMTLKKVVIYCSNIGVKHLTIYAFSTENWKR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE+ L+ L+ FL+ L+ +N++++VIG+ L ++ + E T +N GL
Sbjct: 81 PQSEVDALMNLLLEFLRNAERELEGSNVRIKVIGDINGLPGELQNEIARVEKFTGVNNGL 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL IA NY SR EI A++NI Q+I++G + +D+D + ++L T +P+PDL+IRT G
Sbjct: 141 NLNIALNYGSRFEILNAVRNIAQEIKNGKLSINDIDEKQLEQHLYTKGIPEPDLLIRTSG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E+R+S++LLWQ AY+EF F WPD + A+ + R+RR+GG+
Sbjct: 201 EQRISNYLLWQCAYTEFWFTDTLWPDINDRHIADAIKAFEKRNRRYGGVE 250
>gi|322390832|ref|ZP_08064342.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
parasanguinis ATCC 903]
gi|321142502|gb|EFX37970.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
parasanguinis ATCC 903]
Length = 249
Score = 214 bits (546), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 106/233 (45%), Positives = 139/233 (59%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA R PR GH+ G+E E+ AA +G++ LT++AFS NW R
Sbjct: 17 PKHIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQEVTIAAKNMGVQVLTVYAFSTENWTR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ ++ L F + L +NN+K+++IG+ L + L L+ AE T LNTGL
Sbjct: 77 PEDEVKFIMHLPVEFYDRFVPELHRNNVKIQMIGDTKKLPKETLEALERAEAMTHLNTGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI++A+K I Q++ D+ +IA L T +P DPDLII
Sbjct: 137 ILNFALNYGGRAEITQAVKQIAQEVLDAKFSPEDITEEMIADSLYTESLPRVLRDPDLII 196
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSE F WPDF E A+ +Y+ R RRFGG+
Sbjct: 197 RTSGEIRLSNFLPWQAAYSELYFTDVMWPDFGEEALRSAIVEYSHRHRRFGGV 249
>gi|134299820|ref|YP_001113316.1| undecaprenyl diphosphate synthase [Desulfotomaculum reducens MI-1]
gi|134052520|gb|ABO50491.1| Undecaprenyl pyrophosphate synthetase [Desulfotomaculum reducens
MI-1]
Length = 263
Score = 214 bits (546), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 106/242 (43%), Positives = 147/242 (60%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ S+ + P HI IIMDGNGRWA RG+PR GHR G+E IV +E+GI LT
Sbjct: 22 LLQSIDRNKLPQHIAIIMDGNGRWAQRRGMPRSLGHRAGVESLRNIVKLCSEIGIGYLTC 81
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E+S L+ L+ +L+K L KNN++V IG L L+ A
Sbjct: 82 YAFSTENWKRPQKEVSYLMDLLVEYLEKEVVELHKNNVRVNAIGRLEELPQRAQEALQAA 141
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+T+ NTGL L +A NY R EI+ A+ I ++S + +++ LI L T+ +P
Sbjct: 142 FQKTKNNTGLTLNLALNYGGRTEITDAVIKIANMVKSNEMEVANINDKLICDSLYTAGMP 201
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DP+L+IR GE R+S+FLLWQ+AY+EF WPDF R A+ + R+RRFGGL+
Sbjct: 202 DPELLIRPSGECRISNFLLWQLAYTEFWLADVMWPDFQRYHLLQAIIGFQRRERRFGGLN 261
Query: 241 KK 242
KK
Sbjct: 262 KK 263
>gi|330833578|ref|YP_004402403.1| undecaprenyl pyrophosphate synthase [Streptococcus suis ST3]
gi|329307801|gb|AEB82217.1| undecaprenyl pyrophosphate synthase [Streptococcus suis ST3]
Length = 251
Score = 214 bits (545), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 106/233 (45%), Positives = 140/233 (60%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA R PR GH+ G++ ++ A+++G+K LT++AFS NW R
Sbjct: 19 PKHIAVIMDGNGRWAKKRMQPRIMGHKAGMDALQKVTKTASDLGVKVLTVYAFSTENWSR 78
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ ++ L F K L NN+K+++IG+ L L L +AE +T+ NTGL
Sbjct: 79 PEKEVKFIMNLPVEFYDKYVPELHANNVKIQMIGDHSKLPVPTLNALYKAEQKTKSNTGL 138
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY RDE++RA+K I QD+ D+D LIA YL T + DPDL+I
Sbjct: 139 ILNFALNYGGRDEVTRAVKAIAQDVLDAKFNPGDIDEKLIADYLYTGTLSPTLRDPDLVI 198
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSE F WPDF E A+ +YN R RRFGG+
Sbjct: 199 RTSGELRLSNFLPWQTAYSELYFTDIAWPDFDGEALKLAIKEYNRRHRRFGGV 251
>gi|239631341|ref|ZP_04674372.1| undecaprenyl pyrophosphate synthetase [Lactobacillus paracasei
subsp. paracasei 8700:2]
gi|301066627|ref|YP_003788650.1| undecaprenyl pyrophosphate synthase [Lactobacillus casei str.
Zhang]
gi|239525806|gb|EEQ64807.1| undecaprenyl pyrophosphate synthetase [Lactobacillus paracasei
subsp. paracasei 8700:2]
gi|300439034|gb|ADK18800.1| Undecaprenyl pyrophosphate synthase [Lactobacillus casei str.
Zhang]
Length = 250
Score = 214 bits (545), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 107/234 (45%), Positives = 144/234 (61%), Gaps = 3/234 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH++G++ I AA+ +G+K LT++AFS NW+R
Sbjct: 17 PAHIAIIMDGNGRWAKRRFLPRVAGHKQGMQNVKTITKAASRLGVKVLTLYAFSTENWKR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE++ L++L F L K N+KV V+G L ++A T NTG+
Sbjct: 77 PGSEVNYLMRLPVDFFNDFMPDLIKENVKVEVMGELDDLPPQTRQASEKAMADTANNTGM 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT---SDVPDPDLIIR 187
L A NY RDE+ A + + + ++ G + +D+D A L T D+ DPDL+IR
Sbjct: 137 ILNFALNYGGRDELVHAAQKLAKQVQEGELSPNDIDDRHFANALMTGFLGDLADPDLLIR 196
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
T GE R+S+FLLWQ+AYSE VF+ +YWPDFS A+ +Y RDRRFGGL K
Sbjct: 197 TSGELRISNFLLWQIAYSELVFVDDYWPDFSPAALEAAIAEYQARDRRFGGLKK 250
>gi|332359312|gb|EGJ37133.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sanguinis
SK49]
Length = 249
Score = 214 bits (545), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 105/233 (45%), Positives = 143/233 (61%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA R PR GH+ G+E ++ AA E+G++ LT++AFS NW R
Sbjct: 17 PKHIAVIMDGNGRWAKKRMQPRVFGHKAGMETLQKVTIAAKEMGVQVLTVYAFSTENWSR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S ++ L F + L KNN+K+++IG+ L L++AE T+LNTGL
Sbjct: 77 PEKEVSFIMNLPVEFYDRYVPELHKNNVKIQMIGDTAKLPKATFEALEKAESLTKLNTGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI++A+K I QD+ + D+ +I YL TS++P DPDL+I
Sbjct: 137 ILNFALNYGGRYEINQAVKLIAQDVLDAKLSPGDITEEVIGNYLYTSNLPKMLRDPDLVI 196
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSE F WPDF A+ +Y+ R+RRFGG+
Sbjct: 197 RTSGELRLSNFLPWQSAYSELYFTDILWPDFDENTLKTAIAEYSRRNRRFGGV 249
>gi|258541748|ref|YP_003187181.1| undecaprenyl pyrophosphate synthetase [Acetobacter pasteurianus IFO
3283-01]
gi|256632826|dbj|BAH98801.1| undecaprenyl pyrophosphate synthetase [Acetobacter pasteurianus IFO
3283-01]
gi|256635883|dbj|BAI01852.1| undecaprenyl pyrophosphate synthetase [Acetobacter pasteurianus IFO
3283-03]
gi|256638938|dbj|BAI04900.1| undecaprenyl pyrophosphate synthetase [Acetobacter pasteurianus IFO
3283-07]
gi|256641992|dbj|BAI07947.1| undecaprenyl pyrophosphate synthetase [Acetobacter pasteurianus IFO
3283-22]
gi|256645047|dbj|BAI10995.1| undecaprenyl pyrophosphate synthetase [Acetobacter pasteurianus IFO
3283-26]
gi|256648102|dbj|BAI14043.1| undecaprenyl pyrophosphate synthetase [Acetobacter pasteurianus IFO
3283-32]
gi|256651155|dbj|BAI17089.1| undecaprenyl pyrophosphate synthetase [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256654146|dbj|BAI20073.1| undecaprenyl pyrophosphate synthetase [Acetobacter pasteurianus IFO
3283-12]
Length = 246
Score = 214 bits (545), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 100/228 (43%), Positives = 141/228 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA RGLPR AGHR G E V AA + G+ LT++AFS NW R
Sbjct: 13 PTHVAVIMDGNGRWARERGLPRLAGHRAGAEAVARCVRAAMQRGVAYLTLYAFSSENWAR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+S+L L++ +L+ L K +++R IG+ DD + L +AE TR N+ L
Sbjct: 73 GQEEVSDLTGLLRYYLRHKVRELHKEGVRLRFIGDLARFDDSLREELAQAESLTRGNSKL 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y R +I +A + + Q+ + G + + S+ +L TS VPDPD+++RT G
Sbjct: 133 TLILALSYGGRLDIVQAAQRLAQEAKDGRIAPEQITESVFTNFLWTSGVPDPDVVVRTSG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E RLS+FLLWQ AY+E VF+ +WPDF+ F L+QY R+RRFG
Sbjct: 193 ECRLSNFLLWQSAYAELVFLNVFWPDFNERHFAMVLDQYAQRERRFGA 240
>gi|307264904|ref|ZP_07546466.1| undecaprenyl diphosphate synthase [Thermoanaerobacter wiegelii
Rt8.B1]
gi|306920162|gb|EFN50374.1| undecaprenyl diphosphate synthase [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 249
Score = 214 bits (545), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 142/229 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA RG+ R GH+ G+ E+V A+ E+GIK LT++AFS NW+R
Sbjct: 21 PIHIGIIMDGNGRWAQKRGMMRFYGHKAGVNAVREVVKASRELGIKYLTLYAFSTENWKR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L+ +L K L KNN+ + IG+ L + A++ T+ N+GL
Sbjct: 81 PKEEVNFLMDLLVEYLSKEVDELNKNNVLINFIGDISVLPQKCKIEIDRAQNVTKNNSGL 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY RDEI +A+K I I + + ++ I++ L T + PDPDLIIRT G
Sbjct: 141 VLNIALNYGGRDEIVKAVKKICTKILNKELSIEEITEQTISENLYTKNQPDPDLIIRTSG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
EKRLS+FLLWQ AYSE F WPDF +E A+ Y R RRFGG+
Sbjct: 201 EKRLSNFLLWQSAYSELWFTEVLWPDFGKEHLIEAILYYQTRQRRFGGV 249
>gi|158520495|ref|YP_001528365.1| undecaprenyl diphosphate synthase [Desulfococcus oleovorans Hxd3]
gi|158509321|gb|ABW66288.1| undecaprenyl diphosphate synthase [Desulfococcus oleovorans Hxd3]
Length = 247
Score = 214 bits (545), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 138/227 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R L R GHR+G++V IV A E+G+ LT++AFS NW+R
Sbjct: 19 PRHIAIIMDGNGRWAKQRSLERLEGHRRGVQVIEAIVTACTEIGVSCLTLYAFSTENWQR 78
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ ++ L++ FL LK N +++ V+G L + L A + T+ L
Sbjct: 79 PAPEVEGIMALLEMFLAAKQQELKDNGVRLNVVGEVDMLPASVRAALDRAIEHTKSGNTL 138
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y R EI+ A + I D+ +G + DVD +L+++YL T D+PDPDL+IRT G
Sbjct: 139 VLTLALSYGGRSEITAATRRIAADVVAGRIDVKDVDEALVSRYLYTHDMPDPDLMIRTSG 198
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+FLLWQ+AY+E P WPDF + + + RDRRFG
Sbjct: 199 EMRISNFLLWQLAYAELYVTPTLWPDFDKAELIRIIADFQSRDRRFG 245
>gi|24380152|ref|NP_722107.1| undecaprenyl pyrophosphate synthase [Streptococcus mutans UA159]
gi|42559978|sp|Q8DSJ7|UPPS_STRMU RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|24378153|gb|AAN59413.1|AE015006_6 putative undecaprenyl pyrophosphate synthetase [Streptococcus
mutans UA159]
Length = 249
Score = 214 bits (545), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 109/236 (46%), Positives = 144/236 (61%), Gaps = 4/236 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P HIGIIMDGNGRWA R PR GH+ G++ ++ AA+E+G+K LT++AFS N
Sbjct: 14 SKIPAHIGIIMDGNGRWAKKRMKPRVFGHKAGMDALQDVTIAASELGVKILTVYAFSTEN 73
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP E+ ++ L F K L KNN+++ VIG++ L L L+ A + T+ N
Sbjct: 74 WARPQEEVKFIMNLPVEFFDKYVPKLHKNNVRILVIGDKEELPAATLDALERARELTKHN 133
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPD 183
+GL L A NY R EI A+K I QD+ D+ LIA YL TS++P DPD
Sbjct: 134 SGLILNFALNYGGRAEIVDAVKLIAQDVLDARFNPGDITEGLIADYLMTSNLPYLYRDPD 193
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
LIIRT GE RLS+FL WQ AYSE F WPDF ++ + A+ ++N R RRFGG+
Sbjct: 194 LIIRTSGELRLSNFLPWQAAYSELYFTDTLWPDFDKKALYLAIEEFNHRHRRFGGV 249
>gi|27365211|ref|NP_760739.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio vulnificus
CMCP6]
gi|37680737|ref|NP_935346.1| undecaprenyl pyrophosphate synthase [Vibrio vulnificus YJ016]
gi|42559945|sp|Q7MIG4|UPPS_VIBVY RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|42559973|sp|Q8DBF7|UPPS_VIBVU RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|27361358|gb|AAO10266.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio vulnificus
CMCP6]
gi|37199486|dbj|BAC95317.1| undecaprenyl pyrophosphate synthase [Vibrio vulnificus YJ016]
Length = 251
Score = 214 bits (545), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 96/235 (40%), Positives = 152/235 (64%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ + + S P HI IIMDGNGRWA ++G PR GH+KG+ + +AAA+++ I+ +T+FA
Sbjct: 4 SQLFTESLPKHIAIIMDGNGRWAKSKGQPRVFGHKKGVSAVRKTIAAASKLNIQAITLFA 63
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP E+ L++L + L L KNN+++R+IG+ + + + EA++
Sbjct: 64 FSSENWRRPEEEVGLLMELFITVLSSEVKKLHKNNLRLRIIGDTSRFSERLQKKIVEAQE 123
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTG+ + +A NY + +I++A++ + Q + G + + D+ IAK+L SD+P+
Sbjct: 124 LTASNTGMVINVAANYGGKWDITQAVQKVAQQVALGDLSAEDITEDDIAKHLTMSDLPEV 183
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRT GE R+S+F+LWQ+AY+E F P +WPDF E A+ + R+RRFG
Sbjct: 184 DLLIRTSGECRISNFMLWQMAYAEMYFTPVFWPDFGEESLIEAITWFVNRERRFG 238
>gi|290579877|ref|YP_003484269.1| putative undecaprenyl pyrophosphate synthetase [Streptococcus
mutans NN2025]
gi|254996776|dbj|BAH87377.1| putative undecaprenyl pyrophosphate synthetase [Streptococcus
mutans NN2025]
Length = 249
Score = 214 bits (545), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 109/236 (46%), Positives = 144/236 (61%), Gaps = 4/236 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P HIGIIMDGNGRWA R PR GH+ G++ ++ AA+E+G+K LT++AFS N
Sbjct: 14 SKIPAHIGIIMDGNGRWAKKRMKPRVFGHKAGMDALQDVTIAASELGVKILTVYAFSTEN 73
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP E+ ++ L F K L KNN+++ VIG++ L L L+ A + T+ N
Sbjct: 74 WARPQEEVKFIMNLPVEFFDKYVPKLHKNNVRILVIGDKEELPAATLDALERARELTKHN 133
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPD 183
+GL L A NY R EI A+K I QD+ D+ LIA YL TS++P DPD
Sbjct: 134 SGLILNFALNYGGRAEIVGAVKLIAQDVLDARFNPGDITEGLIADYLMTSNLPYLYRDPD 193
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
LIIRT GE RLS+FL WQ AYSE F WPDF ++ + A+ ++N R RRFGG+
Sbjct: 194 LIIRTSGELRLSNFLPWQAAYSELYFTDTLWPDFDKKALYLAIEEFNHRHRRFGGV 249
>gi|319649530|ref|ZP_08003686.1| UppS protein [Bacillus sp. 2_A_57_CT2]
gi|317398692|gb|EFV79374.1| UppS protein [Bacillus sp. 2_A_57_CT2]
Length = 259
Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 102/230 (44%), Positives = 147/230 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA R LPR AGH +G++V +I A+++G+K LT++AFS NW+R
Sbjct: 30 PEHVAIIMDGNGRWAKKRALPRVAGHHEGMKVVRKITRFASDIGVKTLTLYAFSTENWKR 89
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL + FL L + N++VR+IG L + +A ++T+ NTGL
Sbjct: 90 PKMEVDFLMKLPEEFLGTFLPELVEENVQVRMIGYFDHLPAHTRNAVSKAMEETKNNTGL 149
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY SR EI A+K++ D +SG + ++++ + YL T + DPDL+IRT G
Sbjct: 150 VLNFALNYGSRAEILEAVKHVLNDCKSGIMDENELNEEKFSSYLMTGGLQDPDLLIRTSG 209
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E RLS+F+LWQ+AY+EF F WPDF+ E A+ + R RRFGG+
Sbjct: 210 EIRLSNFMLWQLAYTEFWFTDVLWPDFNEEQMLEAIEVFQSRQRRFGGVQ 259
>gi|205373429|ref|ZP_03226233.1| undecaprenyl pyrophosphate synthetase [Bacillus coahuilensis m4-4]
Length = 263
Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 101/230 (43%), Positives = 146/230 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R LPR AGH +G++ +I A ++GIK LT++AFS NW+R
Sbjct: 31 PNHIAIIMDGNGRWAKKRALPRVAGHHEGMKTVRKITKVANQLGIKQLTLYAFSTENWKR 90
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL + FL L + N+KV ++G+ ++ + +A ++T+ N GL
Sbjct: 91 PKMEVEYLMKLPEEFLGTFLPELVEENVKVTMMGDEEAIPPHTKNAVYKAIEETKENDGL 150
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY SR EI ++++ +D+++G + ++ + +KYL T D DPDL+IRT G
Sbjct: 151 ILNFALNYGSRAEILDGVRHVLKDVQNGILNEKELTEEVFSKYLMTKDFCDPDLLIRTSG 210
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E RLS+F+LWQ+AY+EF F WPDFS E A+ + R RRFGGL
Sbjct: 211 EIRLSNFMLWQLAYTEFWFTDVLWPDFSEEHLVEAIEAFQGRSRRFGGLK 260
>gi|325688972|gb|EGD30980.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sanguinis
SK115]
gi|332365118|gb|EGJ42881.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sanguinis
SK1059]
Length = 249
Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/233 (45%), Positives = 143/233 (61%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA R PR GH+ G+E + AA E+G++ LT++AFS NW R
Sbjct: 17 PKHIAVIMDGNGRWAKKRMQPRVFGHKAGMETLQRVTIAAKEMGVQVLTVYAFSTENWSR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S ++ L F + L KNN+K+++IG+ L L++AE T+LNTGL
Sbjct: 77 PEKEVSFIMNLPVEFYDRYVPELHKNNVKIQMIGDTAKLPKATFEALEKAESLTKLNTGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI++A+K I QD+ + D+ +I YL TS++P DPDL+I
Sbjct: 137 ILNFALNYGGRYEINQAVKLIAQDVLDAKLSPGDITEEVIGNYLYTSNLPKMLRDPDLVI 196
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSE F WPDF + A+ +Y+ R+RRFGG+
Sbjct: 197 RTSGELRLSNFLPWQSAYSELYFTDILWPDFDEKALKAAIAEYSRRNRRFGGV 249
>gi|253752616|ref|YP_003025757.1| undecaprenyl pyrophosphate synthetase [Streptococcus suis SC84]
gi|253754442|ref|YP_003027583.1| undecaprenyl pyrophosphate synthetase [Streptococcus suis P1/7]
gi|253756375|ref|YP_003029515.1| undecaprenyl pyrophosphate synthetase [Streptococcus suis BM407]
gi|251816905|emb|CAZ52554.1| undecaprenyl pyrophosphate synthetase [Streptococcus suis SC84]
gi|251818839|emb|CAZ56682.1| undecaprenyl pyrophosphate synthetase [Streptococcus suis BM407]
gi|251820688|emb|CAR47450.1| undecaprenyl pyrophosphate synthetase [Streptococcus suis P1/7]
gi|319759031|gb|ADV70973.1| undecaprenyl pyrophosphate synthase [Streptococcus suis JS14]
Length = 251
Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 106/233 (45%), Positives = 140/233 (60%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA R PR GH+ G++ ++ A+++G+K LT++AFS NW R
Sbjct: 19 PKHIAVIMDGNGRWAKKRMQPRIMGHKAGMDALQKVTKTASDLGVKVLTVYAFSTENWSR 78
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ ++ L F K L NN+K+++IG+ L L L +AE +T+ NTGL
Sbjct: 79 PEKEVKFIMNLPVEFYDKYVPELHANNVKIQMIGDHSKLPVPTLNALYKAEQKTKGNTGL 138
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY RDE++RA+K I QD+ D+D LIA YL T + DPDL+I
Sbjct: 139 ILNFALNYGGRDEVTRAVKAIAQDVLDAKFNPGDIDEKLIADYLYTGTLSPTLRDPDLVI 198
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSE F WPDF E A+ +YN R RRFGG+
Sbjct: 199 RTSGELRLSNFLPWQTAYSELYFTDIAWPDFDGEALKLAIKEYNRRHRRFGGV 251
>gi|256420097|ref|YP_003120750.1| undecaprenyl diphosphate synthase [Chitinophaga pinensis DSM 2588]
gi|256035005|gb|ACU58549.1| undecaprenyl diphosphate synthase [Chitinophaga pinensis DSM 2588]
Length = 253
Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/232 (45%), Positives = 149/232 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA RG R GH +G+E I A AE+GI LT++AFS NW R
Sbjct: 13 PRHIAIIMDGNGRWAKERGQDRLFGHHEGVESVRNITEACAELGIGYLTLYAFSTENWDR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
PV E++ +++L+ + ++ +L KNNI++ VIG+ L + ++EA T NTGL
Sbjct: 73 PVYEVNGIMELLVNTIRNEVATLMKNNIRLHVIGDMNMLPGNCKNEMEEAMSITSQNTGL 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL +A +YS+R EI A KNI QD++ G + V + KYL T+ +PDP+L+IRT G
Sbjct: 133 NLVMALSYSARWEIVNAAKNIAQDVKDGKLAPEAVTPEMWQKYLCTATLPDPELMIRTSG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLL+Q+AY+E F WPDF +E + A+ + R+RRFG S++
Sbjct: 193 ECRISNFLLYQLAYAELYFTDTRWPDFRKEHLYEAILNFQNRERRFGKTSEQ 244
>gi|159029860|emb|CAO90914.1| uppS [Microcystis aeruginosa PCC 7806]
Length = 249
Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 95/229 (41%), Positives = 144/229 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA +RGLPR GH++G++ +++ E GI LT +AFS NW R
Sbjct: 21 PQHVAVIMDGNGRWAKSRGLPRIMGHQRGVDALKDLLRCCGEWGIPALTAYAFSTENWGR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P+ E+ L+ L + L++ + + N+K+R IGN +L + + + +++ +T N+G+
Sbjct: 81 PLEEVEFLMTLFERVLQRELEEMMQENVKIRFIGNLAALPESLRREIAKSQAETSKNSGI 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY R+EI +A + I + ++ G V +D SL A+YL T+ +P+PDL+IR+ G
Sbjct: 141 QFTVAANYGGREEIVQACQAIARQVQQGLVSPEAIDESLFAQYLYTAGIPNPDLLIRSSG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+FLLWQ+AY+E WPDF R F AL Y R RRFG L
Sbjct: 201 EMRISNFLLWQMAYAEIYVTDTLWPDFDRVQFHRALKDYQGRHRRFGKL 249
>gi|225155897|ref|ZP_03724382.1| Di-trans,poly-cis-decaprenylcistransferase [Opitutaceae bacterium
TAV2]
gi|224803350|gb|EEG21588.1| Di-trans,poly-cis-decaprenylcistransferase [Opitutaceae bacterium
TAV2]
Length = 268
Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 101/236 (42%), Positives = 143/236 (60%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
++ +PP H+ IIMDGNGRWA RGLPR GHR+G + + A GI+ LT++
Sbjct: 15 TTTLSPPAPPVHVAIIMDGNGRWARQRGLPRLEGHRRGADAVRAAIEGAQAQGIRYLTLY 74
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E+ L+ L++ FLK+ +L KN I++R IG +L + L A
Sbjct: 75 AFSSENWKRPQDEVGGLMNLLEHFLKRETKTLVKNRIRLRTIGRTDALPPPVRAQLAAAI 134
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ T T L +A NY SR E++ ++ I D +G++ + IA LDT+D+PD
Sbjct: 135 EATAPFTEHTLILALNYGSRIELTDTVRRIAVDAAAGTLTPDAITWDAIAARLDTADIPD 194
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDL+IRT GE R+S+FLL Q AY+EF+F P WPDF A+ +Y+ R+RRFG
Sbjct: 195 PDLVIRTSGEMRISNFLLLQAAYAEFIFTPVLWPDFRETDLAAAVAEYHRRERRFG 250
>gi|324989753|gb|EGC21696.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sanguinis
SK353]
gi|328944575|gb|EGG38736.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sanguinis
SK1087]
Length = 249
Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/233 (45%), Positives = 144/233 (61%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA R PR GH+ G+E ++ AA E+G++ LT++AFS NW R
Sbjct: 17 PKHIAVIMDGNGRWAKKRMQPRVFGHKAGMETLQKVTIAAKEMGVQVLTVYAFSTENWSR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S ++ L F + L KNN+K+++IG+ L L++AE T+LNTGL
Sbjct: 77 PEKEVSFIMNLPVEFYDRYVPELHKNNVKIQMIGDTAKLPKATFEALEKAESLTKLNTGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI++A+K I QD+ + D+ +I YL TS++P DPDL+I
Sbjct: 137 ILNFALNYGGRCEINQAVKLIAQDVLDAKLSPGDITEEVIGNYLYTSNLPKMLRDPDLVI 196
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSE F WPDF + A+ +Y+ R+RRFGG+
Sbjct: 197 RTSGELRLSNFLPWQSAYSELYFTDILWPDFDEKALKAAIAEYSRRNRRFGGV 249
>gi|146321816|ref|YP_001201527.1| undecaprenyl pyrophosphate synthase [Streptococcus suis 98HAH33]
gi|145692622|gb|ABP93127.1| Undecaprenyl pyrophosphate synthase [Streptococcus suis 98HAH33]
gi|292559233|gb|ADE32234.1| Di-trans-poly-cis-decaprenylcistransferase [Streptococcus suis GZ1]
Length = 261
Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 106/233 (45%), Positives = 140/233 (60%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA R PR GH+ G++ ++ A+++G+K LT++AFS NW R
Sbjct: 29 PKHIAVIMDGNGRWAKKRMQPRIMGHKAGMDALQKVTKTASDLGVKVLTVYAFSTENWSR 88
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ ++ L F K L NN+K+++IG+ L L L +AE +T+ NTGL
Sbjct: 89 PEKEVKFIMNLPVEFYDKYVPELHANNVKIQMIGDHSKLPVPTLNALYKAEQKTKGNTGL 148
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY RDE++RA+K I QD+ D+D LIA YL T + DPDL+I
Sbjct: 149 ILNFALNYGGRDEVTRAVKAIAQDVLDAKFNPGDIDEKLIADYLYTGTLSPTLRDPDLVI 208
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSE F WPDF E A+ +YN R RRFGG+
Sbjct: 209 RTSGELRLSNFLPWQTAYSELYFTDIAWPDFDGEALKLAIKEYNRRHRRFGGV 261
>gi|212695387|ref|ZP_03303515.1| hypothetical protein BACDOR_04936 [Bacteroides dorei DSM 17855]
gi|237711576|ref|ZP_04542057.1| undecaprenyl pyrophosphate synthetase [Bacteroides sp. 9_1_42FAA]
gi|212662022|gb|EEB22596.1| hypothetical protein BACDOR_04936 [Bacteroides dorei DSM 17855]
gi|229454271|gb|EEO59992.1| undecaprenyl pyrophosphate synthetase [Bacteroides sp. 9_1_42FAA]
Length = 243
Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 104/235 (44%), Positives = 149/235 (63%), Gaps = 2/235 (0%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P H+ IIMDGNGRWA RG R GH+ G E + I AA +G+K LT++ FS N
Sbjct: 10 SRIPAHVAIIMDGNGRWAKQRGQARSFGHQAGAETVHIIAEEAARLGVKYLTLYTFSTEN 69
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RPV E++ L+ L+ +++ + KNNI R+IG+ L ++L L + + T +N
Sbjct: 70 WNRPVDEVAALMSLLMDSIEEE--TFMKNNISFRIIGDTAKLPVEVLERLNQCIEHTSIN 127
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
TG+ L +A +YSS+ EI+ A++ I I++ + D+D +LI +L T+ +PDPDL+IR
Sbjct: 128 TGMCLTLALSYSSKWEITEAVRQITIKIQNNKLAIDDIDDNLINAHLSTNYMPDPDLLIR 187
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE RLS++LLWQ AYSE F +WPDF E F A+ Y R+RRFG S++
Sbjct: 188 TGGEIRLSNYLLWQCAYSELYFCETFWPDFREEEFCKAIYDYQKRERRFGKTSEQ 242
>gi|289578397|ref|YP_003477024.1| undecaprenyl diphosphate synthase [Thermoanaerobacter italicus Ab9]
gi|297544673|ref|YP_003676975.1| undecaprenyl diphosphate synthase [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|289528110|gb|ADD02462.1| undecaprenyl diphosphate synthase [Thermoanaerobacter italicus Ab9]
gi|296842448|gb|ADH60964.1| undecaprenyl diphosphate synthase [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 249
Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 140/229 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA RG+ R GH+ G+ E+V A E+GIK LT++AFS NW+R
Sbjct: 21 PTHIGIIMDGNGRWAQKRGMMRFYGHKAGVNAVREVVKACRELGIKYLTLYAFSTENWKR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L+ +L K L KNN+ + IG+ L ++ A++ T+ N GL
Sbjct: 81 PKEEVNFLMDLLVEYLSKEVDELNKNNVLINFIGDISVLPQGCKTEIERAQNITKNNFGL 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY RDEI +A+K I + + + + I+ L T + PDPDLIIRT G
Sbjct: 141 VLNIALNYGGRDEIVKAVKKICTKVLNKELTIEGITEQTISDNLYTKNQPDPDLIIRTSG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
EKRLS+FLLWQ AYSEF F WPDF +E A+ Y R RRFGG+
Sbjct: 201 EKRLSNFLLWQSAYSEFWFTEVLWPDFKKEHLIKAILYYQTRQRRFGGV 249
>gi|118580464|ref|YP_901714.1| undecaprenyl pyrophosphate synthase [Pelobacter propionicus DSM
2379]
gi|118503174|gb|ABK99656.1| Undecaprenyl pyrophosphate synthetase [Pelobacter propionicus DSM
2379]
Length = 251
Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 103/232 (44%), Positives = 140/232 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R L R GH++G E N +V A +GI+ LT+FAFS NW R
Sbjct: 10 PVHLAIIMDGNGRWAQQRMLKRIVGHQRGAETVNMVVEHAWRLGIQYLTLFAFSSENWSR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L+K +++K + + NI+ VIGNR L D+ L EA QT +NTG+
Sbjct: 70 PAIEVRALMSLLKKYIRKETARMMRKNIRYNVIGNRSDLPVDVNETLDEAIKQTSVNTGM 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y R E+S A + + D+ G + D+ YLDT +PDPD +IRT G
Sbjct: 130 TLTLALSYGGRQELSMAARRLACDVRDGKITPDDISVENFGTYLDTGGLPDPDFLIRTSG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AY+E F WPDF+ F AL + R+RRFG S +
Sbjct: 190 EMRISNFLLWQLAYTELYFTETNWPDFTINEFNKALIDFQSRERRFGKTSDQ 241
>gi|17230924|ref|NP_487472.1| undecaprenyl pyrophosphate synthetase [Nostoc sp. PCC 7120]
gi|42560000|sp|Q8YRL4|UPPS2_ANASP RecName: Full=Undecaprenyl pyrophosphate synthase 2; Short=UPP
synthase 2; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase 2;
AltName: Full=Undecaprenyl diphosphate synthase 2;
Short=UDS 2
gi|17132565|dbj|BAB75131.1| undecaprenyl pyrophosphate synthetase [Nostoc sp. PCC 7120]
Length = 258
Score = 213 bits (543), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 142/227 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA +RGLPR AGHR+G E++ + GIK LT +AFS NW+R
Sbjct: 24 PQHIAVIMDGNGRWATSRGLPRIAGHRQGARTLKELLRCCKDWGIKALTAYAFSTENWQR 83
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P+ E+ L+ L + L++ + + +++ IG+ +L + ++ + +T N +
Sbjct: 84 PIEEVDFLMLLFERLLRRELSQMHREGVRISFIGDLTALPKSLQTEMERSMTETLNNQAI 143
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ +A NY SR+EI+RA + + + ++ G + + V+ ++ ++L T+D PDL+IRT G
Sbjct: 144 HFTVAVNYGSRNEITRACRQVAELVQQGKLSADAVNEGIVEQHLYTTDTQPPDLLIRTSG 203
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E RLS+FLLWQ+AY+E F WPDF RE F AL Y RDRRFG
Sbjct: 204 EMRLSNFLLWQMAYTEMYFTDILWPDFDREAFHQALLSYQKRDRRFG 250
>gi|254449482|ref|ZP_05062919.1| di-trans,poly-cis-decaprenylcistransferase [Octadecabacter
antarcticus 238]
gi|198263888|gb|EDY88158.1| di-trans,poly-cis-decaprenylcistransferase [Octadecabacter
antarcticus 238]
Length = 224
Score = 213 bits (543), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 100/223 (44%), Positives = 141/223 (63%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA R PR GH G EIV A G+K LT+FAFS NW+R +E++
Sbjct: 1 MDGNGRWAQMRNRPRLFGHHAGARRVREIVEACPAEGVKYLTVFAFSTENWKRTQTEVAG 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+KL + ++++ L N ++VR IG+R+ LDD ++ ++ E E T N ++L +A N
Sbjct: 61 LMKLFRRYIQREARDLLANGVRVRFIGDRVRLDDKLVRLMDELELLTSQNDRVHLTVALN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y RDE++RA + + D+ +G + DV + KYLDT +PDPDL+IRT GE R+S+F
Sbjct: 121 YGGRDEVTRAARRLALDVAAGKLMPADVGDETLPKYLDTCFLPDPDLVIRTSGEARISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LLWQ AY+E+ FI WPDF+ E+F L + RDRRFG +
Sbjct: 181 LLWQSAYAEYEFIDTLWPDFTPEVFAKVLTGFKARDRRFGAVK 223
>gi|253581351|ref|ZP_04858577.1| undecaprenyl pyrophosphate synthetase [Fusobacterium varium ATCC
27725]
gi|251836715|gb|EES65249.1| undecaprenyl pyrophosphate synthetase [Fusobacterium varium ATCC
27725]
Length = 230
Score = 213 bits (543), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 107/234 (45%), Positives = 152/234 (64%), Gaps = 7/234 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M S P+HI IIMDGNGRWA RGLPR GH++G + +I+ A ++G+K LT++AFS
Sbjct: 1 MGSRIPNHIAIIMDGNGRWAEKRGLPRTFGHKEGADALRKIITYAGKIGVKYLTVYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+R EI L+ L K++LK ++ KNN++ V G + + +L +K+ ED++R
Sbjct: 61 ENWKRSKDEIDALMFLFKTYLKNEEKNIMKNNVRFLVSGRKNGVSSSLLEAIKKLEDKSR 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
NTGL L IAFNY R EI A+ +I ++SG + +++ +KYL +D+PDP+L+
Sbjct: 121 DNTGLTLNIAFNYGGRAEIIDAVNSI---LKSG---ADNINEEDFSKYL-YNDIPDPELL 173
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRT GE R+S+FLLWQ+AYSE WPDF + A+ YN RDRRFGG+
Sbjct: 174 IRTSGEFRISNFLLWQIAYSEIYITKALWPDFDEKELDKAIQSYNERDRRFGGV 227
>gi|315225609|ref|ZP_07867418.1| di-trans,poly-cis-decaprenylcistransferase [Capnocytophaga ochracea
F0287]
gi|314944426|gb|EFS96466.1| di-trans,poly-cis-decaprenylcistransferase [Capnocytophaga ochracea
F0287]
Length = 240
Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 101/238 (42%), Positives = 151/238 (63%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M ++ P H+ IIMDGNGRWA +GL R GH KG++ ++V E I LT+FAFS
Sbjct: 1 MEITNYPKHLAIIMDGNGRWAKKQGLLRAYGHEKGVQTVRQVVEYCVEHRIPYLTLFAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+ L++L+ FLKK +L KNN++++ IGN L + D+
Sbjct: 61 TENWKRPALEVKALMELLVKFLKKEVDNLHKNNVRLKTIGNLDRFPPKPREALLASIDKL 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NTGL L +A NY +R+EI AIK I ++ G++ ++ + + + ++L T D+PD DL
Sbjct: 121 KNNTGLTLTLALNYGAREEILTAIKEIAAKVKEGTLIANTITETTLQEHLYTYDLPDVDL 180
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IRT GE+R+S+FLLWQ+AY+E F WPDF+++ AL+ Y R+RRFG S++
Sbjct: 181 LIRTSGEERISNFLLWQIAYAELYFTEVLWPDFTKKHLEEALSNYQNRERRFGKTSEQ 238
>gi|237715310|ref|ZP_04545791.1| undecaprenyl pyrophosphate synthetase [Bacteroides sp. D1]
gi|237719661|ref|ZP_04550142.1| undecaprenyl pyrophosphate synthetase [Bacteroides sp. 2_2_4]
gi|262405151|ref|ZP_06081701.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides sp. 2_1_22]
gi|294643549|ref|ZP_06721355.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides ovatus SD
CC 2a]
gi|294807056|ref|ZP_06765875.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides
xylanisolvens SD CC 1b]
gi|298482440|ref|ZP_07000626.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides sp. D22]
gi|229444619|gb|EEO50410.1| undecaprenyl pyrophosphate synthetase [Bacteroides sp. D1]
gi|229450930|gb|EEO56721.1| undecaprenyl pyrophosphate synthetase [Bacteroides sp. 2_2_4]
gi|262356026|gb|EEZ05116.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides sp. 2_1_22]
gi|292641124|gb|EFF59336.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides ovatus SD
CC 2a]
gi|294445755|gb|EFG14403.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides
xylanisolvens SD CC 1b]
gi|298271419|gb|EFI12994.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides sp. D22]
Length = 244
Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 146/232 (62%), Gaps = 2/232 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG R GHR G E I AA +GIK LT++ FS NW R
Sbjct: 13 PQHVAIIMDGNGRWAKQRGEERTYGHRAGAETVQNITEDAARLGIKYLTLYTFSTENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EI+ L+ L+ +++ +L KNNI+ VIG+ L ++ L ++T N+G+
Sbjct: 73 PQDEIAALMNLLLESIEEE--TLMKNNIRFNVIGDFKKLPVEVQKSLTSCIERTSKNSGM 130
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ +A +YSSR EI+ A++ I +++G + + I+ +LDT+ +PDPDL+IRTGG
Sbjct: 131 YMVLALSYSSRWEITEAVRQIATQVKTGEISPEQITDECISSHLDTNFMPDPDLLIRTGG 190
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E RLS++LLWQ AYSE F +WPDF +E + A+ +Y R+RRFG S++
Sbjct: 191 EIRLSNYLLWQCAYSELYFCDTFWPDFDKEELYKAIWEYQQRERRFGKTSEQ 242
>gi|42559825|sp|Q8GLK9|UPPS_AQUPY RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|23296071|gb|AAN12288.1| undecaprenyl pyrophosphate [Aquifex pyrophilus]
Length = 231
Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 106/232 (45%), Positives = 148/232 (63%), Gaps = 6/232 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
MS P+H+ IIMDGNGRWA RGLPR AGH KG EV +IV A E+GIK+LT+FAFS
Sbjct: 1 MSLKIPEHVAIIMDGNGRWARKRGLPRIAGHYKGAEVAEDIVEFAIELGIKHLTLFAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+ L +L++ +L+ L K I+VR IG R ++ +++ +++E E++++
Sbjct: 61 ENWNRPKGEVEALFELLRRYLQTKKDKLYKLGIRVRFIGRRDRINKELVKLMQEIEEESK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
L L +A +Y RD+I RA+K + + ++ L + LD S PDPDL+
Sbjct: 121 KFKNLFLNLAVDYGGRDDILRAVKKAVK------LQREEITEELFSSLLDLSCSPDPDLL 174
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRT GEKR+S+FLLW +AY+E F WPDFSRE F AL ++ R R+FG
Sbjct: 175 IRTAGEKRISNFLLWNLAYTELYFSETLWPDFSREEFLKALEDFSRRKRKFG 226
>gi|91223477|ref|ZP_01258742.1| undecaprenyl diphosphate synthase [Vibrio alginolyticus 12G01]
gi|269966255|ref|ZP_06180344.1| Undecaprenyl diphosphate synthase [Vibrio alginolyticus 40B]
gi|91191563|gb|EAS77827.1| undecaprenyl diphosphate synthase [Vibrio alginolyticus 12G01]
gi|269829170|gb|EEZ83415.1| Undecaprenyl diphosphate synthase [Vibrio alginolyticus 40B]
Length = 251
Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 100/231 (43%), Positives = 149/231 (64%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S S P HI IIMDGNGRWA ++G PR GH+KG+ + VAAA+++GI+ +T+FAFS
Sbjct: 8 SDSLPKHIAIIMDGNGRWAKSKGKPRVFGHKKGVSAVRKTVAAASKLGIRAMTLFAFSSE 67
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+ L++L + L L KNN+++RVIG+ + + + EAE+ T
Sbjct: 68 NWRRPEEEVGLLMELFITVLSSEVKKLHKNNLRLRVIGDTSRFSERLQKKIVEAENLTAD 127
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTG+ + IA NY + +I+ A K + +G + D++ LI ++L +D+P+ DL+I
Sbjct: 128 NTGMVINIAANYGGKWDITEAAKTLALKARNGEIRVEDINEQLITEHLTMADLPEVDLLI 187
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE R+S+F+LWQ+AY+E F PEYWP+F + A+ + R+RRFG
Sbjct: 188 RTSGECRISNFMLWQMAYAEMYFTPEYWPEFDEDSLVEAVTWFINRERRFG 238
>gi|313901394|ref|ZP_07834868.1| Undecaprenyl pyrophosphate synthetase [Thermaerobacter subterraneus
DSM 13965]
gi|313468340|gb|EFR63780.1| Undecaprenyl pyrophosphate synthetase [Thermaerobacter subterraneus
DSM 13965]
Length = 297
Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 99/230 (43%), Positives = 144/230 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG PR AGHR G+E EIV A ++G++ LT++AFS NWRR
Sbjct: 34 PRHVAIIMDGNGRWAQRRGWPRVAGHRAGVESVREIVRFAGDIGLEVLTLYAFSTENWRR 93
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L+ L+ +++ L +N +++RVIG+ L + A + TR N +
Sbjct: 94 PPAEVRALMGLLVEHIRRDLNELHRNGVQIRVIGDPAGLPALPRREVLRAVETTRHNRRM 153
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY +R E++RA + + + G + +D +++A +L T+D+PDPDL+IR G
Sbjct: 154 VLVLALNYGARWELARAARLVAERAARGEIDPAAIDETVLAAHLQTADLPDPDLLIRPSG 213
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E R+S+FLLWQ+AYSE F P WPDF A+ + R+RRFGGL
Sbjct: 214 EWRISNFLLWQIAYSELWFTPVAWPDFRPVHLVEAIEDFARRERRFGGLG 263
>gi|89889538|ref|ZP_01201049.1| undecaprenyl pyrophosphate synthetase [Flavobacteria bacterium
BBFL7]
gi|89517811|gb|EAS20467.1| undecaprenyl pyrophosphate synthetase [Flavobacteria bacterium
BBFL7]
Length = 244
Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 102/232 (43%), Positives = 144/232 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA +GL R GH KG + E V AE+GIKNLT++AFS NW+R
Sbjct: 12 PQHIAVIMDGNGRWAKKQGLMRVRGHEKGAKAVRETVETCAELGIKNLTLYAFSTENWKR 71
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L+ S LKK +L+KNNI ++ +G+ L L+E T N +
Sbjct: 72 PKLEVDTLMRLLVSSLKKELPTLQKNNISLKAVGSLELLPKTAQKELQEVITATASNDHM 131
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL +A +Y SR+E+ IKN+ ++ G + +++ I L T+ +PD DL+IRT G
Sbjct: 132 NLTLALSYGSREELITVIKNVASKVKEGEIEVDNINQDTINSLLYTNYMPDVDLLIRTSG 191
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FLLWQ+AY+E F WPDF +E AL Y R+RRFG S++
Sbjct: 192 EQRISNFLLWQIAYAELYFTDVLWPDFRKEHLIEALKNYQDRERRFGKTSEQ 243
>gi|51245010|ref|YP_064894.1| undecaprenyl pyrophosphate synthetase [Desulfotalea psychrophila
LSv54]
gi|50876047|emb|CAG35887.1| probable undecaprenyl pyrophosphate synthetase [Desulfotalea
psychrophila LSv54]
Length = 261
Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 147/232 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA AR PR GH+ G + EIV+ ++GI LT++AFS NW+R
Sbjct: 25 PAHIAIIMDGNGRWAQARKRPRLFGHKAGADSVEEIVSICCQLGIPALTLYAFSSENWKR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+S L+ +++ +L+ ++KNNI++ IG+ L + L + +T NTG+
Sbjct: 85 PKAEVSGLMSILQKYLRAELPKMQKNNIRLHCIGDIERLPSAVRDTLLQVMGETAKNTGM 144
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y RDEI RAIK I + +G + D+ L++ YLDT+ +P+PDL+IRTGG
Sbjct: 145 ILSLALSYGGRDEICRAIKKISAECVAGDLEETDITPDLLSDYLDTAILPEPDLLIRTGG 204
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E RLS+FLLWQ++Y+E F WP+F E A+ + R+RRFG + +
Sbjct: 205 ESRLSNFLLWQLSYAELYFTDIMWPEFRTEQLATAIASFQERERRFGKIGAQ 256
>gi|219847471|ref|YP_002461904.1| undecaprenyl diphosphate synthase [Chloroflexus aggregans DSM 9485]
gi|219541730|gb|ACL23468.1| undecaprenyl diphosphate synthase [Chloroflexus aggregans DSM 9485]
Length = 241
Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/231 (45%), Positives = 144/231 (62%), Gaps = 4/231 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA RGLPR AGHR G E IV A +G++ LT++AFS NW R
Sbjct: 13 PQHIAVIMDGNGRWAQQRGLPRLAGHRAGTENIRPIVTECARLGVRVLTLYAFSTENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++++ F+ + +L N+ +R +G L + +K A D TR NTGL
Sbjct: 73 PSVEVQGLMQILSEFIDREIRNLHAQNVHLRHLGRLDGLSPHLREKVKYAIDLTRNNTGL 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IAFNY R +I A++ I + SG + + + +I+ +L T +PDPD+IIRT G
Sbjct: 133 ILAIAFNYGGRADIVDAVRAI---VASG-IPADQITDEVISAHLSTHGLPDPDMIIRTSG 188
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E+RLS+FL+WQ AYSE+ F P +WPDF E A+ Y R+RRFGGL +
Sbjct: 189 ERRLSNFLIWQSAYSEYWFTPVFWPDFRPEHLHQAILDYGRRERRFGGLPE 239
>gi|167770610|ref|ZP_02442663.1| hypothetical protein ANACOL_01956 [Anaerotruncus colihominis DSM
17241]
gi|167667205|gb|EDS11335.1| hypothetical protein ANACOL_01956 [Anaerotruncus colihominis DSM
17241]
Length = 242
Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 104/237 (43%), Positives = 148/237 (62%), Gaps = 1/237 (0%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + S S P HIGII+DGNGRWA RGLPR AGHR+G + F +I E+G+K LT++A
Sbjct: 7 ADVPSGSMPAHIGIILDGNGRWAKKRGLPRSAGHRQGADTFGKIARHCREIGVKYLTVYA 66
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW+RP E+ L+ L++ +L Y + N ++R +G R L DI +++ E
Sbjct: 67 FSTENWKRPPDEVEALMDLLRRYLTDT-YKHRDENARLRFLGERGPLSSDIREMIERVEH 125
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
+ NT +N+ IA NY RDEI A + I + G++ ++ L ++ L T+ PDP
Sbjct: 126 DSAANTAINVNIALNYGGRDEIVHAARAIAKQCSEGTLDWKLINEHLFSETLYTAGQPDP 185
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DLIIR GE+R+S+FLLWQ AY+EFVF+ WPDF+ A+ + R+RRFGG+
Sbjct: 186 DLIIRPSGEQRISNFLLWQSAYAEFVFMDVLWPDFTPAHLDQAIRVFLSRNRRFGGV 242
>gi|290968869|ref|ZP_06560406.1| di-trans,poly-cis-decaprenylcistransferase [Megasphaera genomosp.
type_1 str. 28L]
gi|290781165|gb|EFD93756.1| di-trans,poly-cis-decaprenylcistransferase [Megasphaera genomosp.
type_1 str. 28L]
Length = 258
Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 150/232 (64%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P H+ IIMDGNGRWA + LPR GHR G + +IV AA ++GIK LT++AFS N
Sbjct: 26 SRLPRHVAIIMDGNGRWAKRKNLPRHIGHRVGADTLKKIVTAADDLGIKVLTVYAFSTEN 85
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W+RP +E+S ++KL++ +L+K L ++N++++ IG+ L ++ +A N
Sbjct: 86 WKRPEAEVSYIMKLMQDYLRKNLLELAEHNVRLQFIGDISCLAPELQKSFADAVQSMENN 145
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
TGL L IA NY R E++RA++ + + +E G V + D+D +A L T+ D DL+IR
Sbjct: 146 TGLLLNIAVNYGGRAELTRAVRTLAEQVEQGKVRAGDIDEERLAGELYTAPDNDVDLVIR 205
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
G + R+S+FLLWQ+AY+EF + P WPDF+++ AL Y R+RRFGGL
Sbjct: 206 PGNDFRISNFLLWQIAYAEFWYTPICWPDFTKDTLLEALYAYQGRERRFGGL 257
>gi|212550574|ref|YP_002308891.1| undecaprenyl pyrophosphate synthetase [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212548812|dbj|BAG83480.1| undecaprenyl pyrophosphate synthetase [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 254
Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 102/237 (43%), Positives = 154/237 (64%), Gaps = 10/237 (4%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA G+ R GH++GI +IV ++++GI+ LTI+ FS NW R
Sbjct: 16 PQHIAIIMDGNGRWALKNGMNRLQGHQEGIISIRKIVEVSSKIGIEYLTIYTFSTENWDR 75
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGN-----RLSLDDDILCVLKEAEDQTR 125
P+ EIS L+ LI + G L KNNI+++VIG+ +++ D +C+ K A+
Sbjct: 76 PIEEISALMDLIVKTVHHGTNDLVKNNIRLQVIGDTKRLSQITRDSLGICIEKTAQ---- 131
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N+GL L +A +YSS EI+ A++NI ++ G + ++D + + +L T+++P PDL+
Sbjct: 132 -NSGLTLTLALSYSSHWEITEAVRNIAYKVKGGELDPENIDEKIFSAFLATNNIPSPDLL 190
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTGGE RLS++LLWQ+AY+E F P WP+F E F+ A+ + R+RRFG S++
Sbjct: 191 IRTGGEYRLSNYLLWQLAYTELYFTPICWPEFREENFYEAIYNFQRRERRFGKTSEQ 247
>gi|27467854|ref|NP_764491.1| undecaprenyl pyrophosphatase synthetase [Staphylococcus epidermidis
ATCC 12228]
gi|57866734|ref|YP_188409.1| undecaprenyl diphosphate synthase [Staphylococcus epidermidis
RP62A]
gi|251810691|ref|ZP_04825164.1| Di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis BCM-HMP0060]
gi|282876308|ref|ZP_06285175.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis SK135]
gi|293366776|ref|ZP_06613452.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis M23864:W2(grey)]
gi|42559968|sp|Q8CPG7|UPPS_STAES RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|73920279|sp|Q5HPT1|UPPS_STAEQ RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|27315399|gb|AAO04533.1|AE016747_30 undecaprenyl pyrophosphatase synthetase [Staphylococcus epidermidis
ATCC 12228]
gi|57637392|gb|AAW54180.1| undecaprenyl diphosphate synthase [Staphylococcus epidermidis
RP62A]
gi|251805851|gb|EES58508.1| Di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis BCM-HMP0060]
gi|281295333|gb|EFA87860.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis SK135]
gi|291319077|gb|EFE59447.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis M23864:W2(grey)]
gi|329736327|gb|EGG72599.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU028]
gi|329736625|gb|EGG72891.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU045]
Length = 256
Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 147/232 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA R +PR GH +G++ +I A+++GIK LT++AFS NW R
Sbjct: 25 PEHVAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITREASDIGIKYLTLYAFSTENWSR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE++ ++ L +FLK L + N+K+ IG L + + A+ +T+ NTGL
Sbjct: 85 PESEVNYIMNLPVNFLKTFLPELIEKNVKIETIGFYEGLPQSTIDAIDFAKAKTQHNTGL 144
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY R EI +++K I+ +++ S +D +LI ++L T PDPDL+IRT G
Sbjct: 145 TLVFAINYGGRAEIIQSMKAIYNELQLNGQGSEVIDEALIKRHLMTHSYPDPDLLIRTSG 204
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FL+WQ +YSEF+F + WPDF + L Y R RRFGGLS++
Sbjct: 205 EQRISNFLIWQASYSEFIFNEKLWPDFDEKELRECLKIYQSRQRRFGGLSEE 256
>gi|320155596|ref|YP_004187975.1| undecaprenyl pyrophosphate synthetase [Vibrio vulnificus MO6-24/O]
gi|319930908|gb|ADV85772.1| undecaprenyl pyrophosphate synthetase [Vibrio vulnificus MO6-24/O]
Length = 251
Score = 213 bits (541), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 95/235 (40%), Positives = 152/235 (64%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ + + S P HI IIMDGNGRWA ++G PR GH+KG+ + +AAA+++ I+ +T+FA
Sbjct: 4 SQLFTESLPKHIAIIMDGNGRWAKSKGQPRVFGHKKGVSAVRKTIAAASKLNIQAITLFA 63
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP E+ L++L + L L+KNN+++R+IG+ + + + EA++
Sbjct: 64 FSSENWRRPEEEVGLLMELFITVLSSEVKKLRKNNLRLRIIGDTSRFSERLQKKIVEAQE 123
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTG+ + +A NY + +I++A++ + Q + G + + + IAK+L SD+P+
Sbjct: 124 LTASNTGMVINVAANYGGKWDITQAVQKVAQQVALGELSAEGITEDDIAKHLTMSDLPEV 183
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRT GE R+S+F+LWQ+AY+E F P +WPDF E A+ + R+RRFG
Sbjct: 184 DLLIRTSGECRISNFMLWQMAYAEMYFTPVFWPDFGEESLIEAITWFVNRERRFG 238
>gi|292492492|ref|YP_003527931.1| undecaprenyl diphosphate synthase [Nitrosococcus halophilus Nc4]
gi|291581087|gb|ADE15544.1| undecaprenyl diphosphate synthase [Nitrosococcus halophilus Nc4]
Length = 252
Score = 213 bits (541), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 101/236 (42%), Positives = 146/236 (61%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
SS P H+ IIMDGNGRWA R PR GHR G+E EI+ A G++ LT+FAFS
Sbjct: 10 SSKIPRHVAIIMDGNGRWAKQRNRPRFYGHRAGVEAVEEILQACTNAGVQVLTLFAFSSE 69
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP E+ L+ L KS L L++ N+++R+IG+R L +++ + +AE T
Sbjct: 70 NWHRPSQEVQLLMDLFKSALSSRLDRLQEWNVRLRIIGDRNGLSEELRSEIAKAEALTAT 129
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N G+ L +A NY R +I++A K + +E+ + S + + A +L +D+P+PDL I
Sbjct: 130 NKGITLVVAANYGGRWDITQAAKQVAVKVENKQMTSDSITPEVFAAHLSIADLPEPDLFI 189
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE+R+S+FLLWQ+AY+EF F WPDF + F A+ + R+RRFG S +
Sbjct: 190 RTGGEQRVSNFLLWQLAYTEFYFTDILWPDFDKTAFAVAIETFLQRERRFGRTSDQ 245
>gi|242242543|ref|ZP_04796988.1| undecaprenyl pyrophosphatase synthetase [Staphylococcus epidermidis
W23144]
gi|242233970|gb|EES36282.1| undecaprenyl pyrophosphatase synthetase [Staphylococcus epidermidis
W23144]
Length = 256
Score = 213 bits (541), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 147/232 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA R +PR GH +G++ +I A+++GIK LT++AFS NW R
Sbjct: 25 PEHVAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITREASDLGIKYLTLYAFSTENWSR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE++ ++ L +FLK L + N+K+ IG L + + A+ +T+ NTGL
Sbjct: 85 PESEVNYIMNLPVNFLKTFLPELIEKNVKIETIGFYEGLPQSTINAIDFAKAKTQNNTGL 144
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY R EI +++K I+ +++ S +D +LI ++L T PDPDL+IRT G
Sbjct: 145 TLVFAINYGGRAEIIQSMKTIYNELQLNGQGSDVIDEALIKRHLMTHSYPDPDLLIRTSG 204
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FL+WQ +YSEF+F + WPDF + L Y R RRFGGLS++
Sbjct: 205 EQRISNFLIWQASYSEFIFNEKLWPDFDEKELRECLKIYQSRQRRFGGLSEE 256
>gi|189499410|ref|YP_001958880.1| undecaprenyl diphosphate synthase [Chlorobium phaeobacteroides BS1]
gi|189494851|gb|ACE03399.1| undecaprenyl diphosphate synthase [Chlorobium phaeobacteroides BS1]
Length = 276
Score = 213 bits (541), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 146/232 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA +G R GH G+E ++V A A++GI LT+F FS NW+R
Sbjct: 34 PEHVAIIMDGNGRWARQKGKTRIEGHAAGVEAVRDVVEACAQLGIGYLTLFTFSTENWKR 93
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EIS L++L+ L+K +L +N +++ VIGN L + LK+ + T+ NTGL
Sbjct: 94 PEKEISSLMQLLVKVLQKEARALFRNKVRIHVIGNIEQLPQKVKQTLKDTVELTKDNTGL 153
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA +YS + +I +A + I ++I G + +D L+ +L T +P+P+L+IRT G
Sbjct: 154 TLCIALSYSGKWDILQACRAISREIAEGRISPDKIDEQLMDSFLSTRGIPEPELLIRTSG 213
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ AYSE F YWPDF R + A+ + R+RRFG S++
Sbjct: 214 EFRISNFLLWQSAYSEIYFTNTYWPDFRRGQLYDAIRDFQKRERRFGQTSEQ 265
>gi|189462014|ref|ZP_03010799.1| hypothetical protein BACCOP_02686 [Bacteroides coprocola DSM 17136]
gi|189431228|gb|EDV00213.1| hypothetical protein BACCOP_02686 [Bacteroides coprocola DSM 17136]
Length = 245
Score = 213 bits (541), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 146/232 (62%), Gaps = 2/232 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA RGL R GH+ G E + I A+ +G+K LT++ FS NW R
Sbjct: 13 PAHIAIIMDGNGRWAKQRGLVRSLGHQAGAETVHVIAEEASNLGVKYLTLYTFSTENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L+ +++ + KNNI R+IG L D+L L + +T NTG+
Sbjct: 73 PADEVAALMSLLIDSIEEE--TFMKNNISFRIIGETEKLPADVLNRLNQCVQRTSKNTGM 130
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +YSS+ EI++A+K I + + G + +D+ +++YL T+ +PDPDL+IRTGG
Sbjct: 131 CLVLALSYSSKWEITKAVKEISEKVACGELNINDITDQTVSQYLATNFMPDPDLLIRTGG 190
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E RLS+++LWQ AYSE F +WPDF E A+ Y R+RRFG S++
Sbjct: 191 EIRLSNYMLWQCAYSELYFCDTFWPDFKEEELCKAICDYQRRERRFGKTSEQ 242
>gi|172037217|ref|YP_001803718.1| undecaprenyl pyrophosphate synthetase [Cyanothece sp. ATCC 51142]
gi|171698671|gb|ACB51652.1| undecaprenyl pyrophosphate synthetase [Cyanothece sp. ATCC 51142]
Length = 250
Score = 213 bits (541), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 96/231 (41%), Positives = 141/231 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA +GLPR AGHR+G + +++ +GIK LT +AFS NWRR
Sbjct: 18 PQHVAVIMDGNGRWAMEKGLPRVAGHRQGAKTLKKLLRCCHRLGIKELTAYAFSTENWRR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P+ EI L+ L + L + L + N+++ IG+ L + ++ + ++T N +
Sbjct: 78 PLEEIDFLMLLFEQLLIQELEQLHEQNVRISFIGDLSILPKSLQEIIHHSMEKTINNQTI 137
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ +A NY R EI A + I Q + G++ +D ++ +YL TS DPDL+IRT G
Sbjct: 138 HFRVAINYGGRQEIVNACRQIVQQVNQGNLTLETIDEAVFKQYLYTSGAKDPDLLIRTSG 197
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E RLS++LLWQ+AY+E F WPDF F+ AL+ Y R+RRFGGL+K
Sbjct: 198 EMRLSNYLLWQMAYTEIYFTEVLWPDFKTAQFYDALSHYQQRNRRFGGLTK 248
>gi|329724317|gb|EGG60829.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU144]
Length = 256
Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 147/232 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA R +PR GH +G++ +I A+++GIK LT++AFS NW R
Sbjct: 25 PEHVAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITREASDLGIKYLTLYAFSTENWSR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE++ ++ L +FLK L + N+K+ IG L + + A+ +T+ NTGL
Sbjct: 85 PESEVNYIMNLPVNFLKTFLPELIEKNVKIETIGFYDGLPQSTIDAIDFAKAKTQHNTGL 144
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY R EI +++K I+ +++ S +D +LI ++L T PDPDL+IRT G
Sbjct: 145 TLVFAINYGGRAEIIQSMKTIYNELQLNGQGSEVIDEALIKRHLMTHSYPDPDLLIRTSG 204
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FL+WQ +YSEF+F + WPDF + L Y R RRFGGLS++
Sbjct: 205 EQRISNFLIWQASYSEFIFNEKLWPDFDEKELRECLKIYQSRQRRFGGLSEE 256
>gi|304316873|ref|YP_003852018.1| undecaprenyl diphosphate synthase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778375|gb|ADL68934.1| undecaprenyl diphosphate synthase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 253
Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 102/229 (44%), Positives = 143/229 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG R GHR G+E +V A+ E+GIK LT++AFS NW+R
Sbjct: 25 PKHVAIIMDGNGRWAKKRGFIRTLGHRAGMEAVKRVVRASCEIGIKYLTLYAFSTENWKR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L+ +L + L +N++K+ IG+ + + +KE+E+ T+ N GL
Sbjct: 85 PAEEVNGLMDLLIEYLGREINELNENDVKLNFIGDLSKIPEKCKIKIKESEEITKNNKGL 144
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R+EI A+K I + + G + +D+D +IA L T+ PDPDLIIR G
Sbjct: 145 TLNIALNYGGRNEIVNAVKKIGKSLLDGKIKLNDIDEQIIADNLYTAGQPDPDLIIRPSG 204
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+F+LWQ AYSE F WPDF + A+ Y R+RRFGG+
Sbjct: 205 ELRISNFMLWQSAYSELWFSDILWPDFDKNHLLEAIIDYQKRNRRFGGI 253
>gi|320159760|ref|YP_004172984.1| undecaprenyl pyrophosphate synthetase [Anaerolinea thermophila
UNI-1]
gi|319993613|dbj|BAJ62384.1| undecaprenyl pyrophosphate synthetase [Anaerolinea thermophila
UNI-1]
Length = 249
Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 105/232 (45%), Positives = 148/232 (63%), Gaps = 4/232 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA RGLPR AGHR G E I+ A+ E G+K LTI+AFS NW R
Sbjct: 14 PVHVAMIMDGNGRWAQKRGLPRLAGHRAGTENLRRIIRASVEFGVKYLTIYAFSTENWGR 73
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ +++ + + L + +++R +G+ L + + A ++TR N L
Sbjct: 74 PQEEVEGLLHILEEVIDRELDELDQQGVQLRHLGHLDRLPAMLQEKIIRAVERTRDNDRL 133
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +AFNY RDEI AI+ + +D SV +V L+++YL T+D+PDPDLIIRT G
Sbjct: 134 ILSVAFNYGGRDEIVCAIRAMMRD----SVKPEEVTPELVSRYLFTADLPDPDLIIRTSG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FL+WQ AYSE+ P WPDF RE + AL +Y+ R+RRFG L+ +
Sbjct: 190 EMRVSNFLIWQSAYSEWYVTPVLWPDFDREEYLKALIEYSHRERRFGKLTAQ 241
>gi|163801783|ref|ZP_02195680.1| undecaprenyl diphosphate synthase [Vibrio sp. AND4]
gi|159174291|gb|EDP59095.1| undecaprenyl diphosphate synthase [Vibrio sp. AND4]
Length = 251
Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 101/231 (43%), Positives = 147/231 (63%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S S P HI IIMDGNGRWA ++G PR GH+KG+ + VA A+++GIK +T+FAFS
Sbjct: 8 SDSLPKHIAIIMDGNGRWAKSKGKPRVFGHKKGVNAVRKTVATASKLGIKAMTLFAFSSE 67
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+ L++L S L L KNN+++RVIG+ + + + EAE T
Sbjct: 68 NWRRPEEEVGLLMELFISVLSSEVKKLHKNNLRLRVIGDISRFSERLQGKIAEAEALTLN 127
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTG+ + IA NY + +I+ A K + +G + D++ LI ++L +D+P+ DL+I
Sbjct: 128 NTGMVINIAANYGGKWDITEATKTLALKARNGEIRVEDINEQLITRHLTMADLPEVDLLI 187
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE R+S+F+LWQ+AY+E F PEYWP+F + A+ + R+RRFG
Sbjct: 188 RTSGECRISNFMLWQMAYAEMYFTPEYWPEFDEDSLIEAVTWFIDRERRFG 238
>gi|220931614|ref|YP_002508522.1| undecaprenyl diphosphate synthase [Halothermothrix orenii H 168]
gi|219992924|gb|ACL69527.1| undecaprenyl diphosphate synthase [Halothermothrix orenii H 168]
Length = 240
Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 146/233 (62%), Gaps = 1/233 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +GLPR AGHR+G++ +I+ A E+ I LT++AFS NWRR
Sbjct: 4 PSHVAIIMDGNGRWAQEKGLPRYAGHREGVKTLKKIIKKAGEMKIPCLTVYAFSTENWRR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL K LK L N++V +IG R L ++ ++ E TR G+
Sbjct: 64 PRKEVDFLMKLFKETLKNESQELASKNVRVNIIGRRNGLSKSLINAIEYIEKITRDKNGM 123
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IAFNY R EI ++K + QD+ G + ++D + +KYL P+ +L+IRTGG
Sbjct: 124 ELNIAFNYGGRAEIVDSVKKVVQDVNQG-LALDELDENNFSKYLYNPRWPEVELLIRTGG 182
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
E R+S+++LWQ+AY+E FI + WPDF+ E A+ + RDRRFGGL + G
Sbjct: 183 EMRISNYMLWQLAYAELYFIDKCWPDFNGEDLEKAIKVFQQRDRRFGGLPEVG 235
>gi|77164330|ref|YP_342855.1| di-trans-poly-cis-decaprenylcistransferase [Nitrosococcus oceani
ATCC 19707]
gi|254434491|ref|ZP_05047999.1| undecaprenyl diphosphate synthase [Nitrosococcus oceani AFC27]
gi|76882644|gb|ABA57325.1| Undecaprenyl pyrophosphate synthetase [Nitrosococcus oceani ATCC
19707]
gi|207090824|gb|EDZ68095.1| undecaprenyl diphosphate synthase [Nitrosococcus oceani AFC27]
Length = 252
Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 96/237 (40%), Positives = 146/237 (61%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
SS P H+ IIMDGNGRWA R PR GHR G+E ++ A A+ G++ LT+FAFS
Sbjct: 9 QSSKIPSHVAIIMDGNGRWAKQRNRPRFYGHRAGVEAVEGVLRACADTGVRVLTLFAFSS 68
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NWRRP E+ L++L+ S + +++ N+ +R+IG+R + + + +AE T
Sbjct: 69 ENWRRPSQEVQLLMELLASAVSNRLQQIQEQNVCLRIIGDRSKFPEALQTEMAKAEALTA 128
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N G+ L +A NY R +I++A+K + +E G + + + A +L + +P+PDL
Sbjct: 129 QNDGITLVVAANYGGRWDITQAVKQVAAKVEEGRIAVDSITPEVFAAHLSLAGLPEPDLF 188
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTGGE+R+S+FLLWQ+AY+EF F WPDF+ F A+ + R+RRFG S++
Sbjct: 189 IRTGGEQRVSNFLLWQLAYTEFYFTDILWPDFNEAAFARAIKTFVRRERRFGQTSEQ 245
>gi|32476379|ref|NP_869373.1| undecaprenyl pyrophosphate synthetase [Rhodopirellula baltica SH 1]
gi|42559764|sp|Q7UF53|UPPS_RHOBA RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|32446924|emb|CAD78830.1| undecaprenyl pyrophosphate synthetase [Rhodopirellula baltica SH 1]
gi|327539010|gb|EGF25644.1| undecaprenyl pyrophosphate synthetase [Rhodopirellula baltica WH47]
Length = 244
Score = 212 bits (540), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 93/236 (39%), Positives = 153/236 (64%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
++S + P H+ IIMDGNGRWA AR LPR GHR+G+ + A+E+ + LT++ S
Sbjct: 6 LLSMNLPRHVAIIMDGNGRWAQARDLPRIEGHRRGVTTVRTVTEMASELKLDALTLYCLS 65
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP +E+ L+ L++ +L + +++ N+++R IG R L D++L + + + +
Sbjct: 66 SENWKRPQAELDFLMHLLQQYLVEERRTIRDQNMRLRFIGRRDRLSDEVLKEIAKTQAVS 125
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NTG L +A +Y RDE++R + + Q + G ++ SL+ + LDT+ +PD DL
Sbjct: 126 ENNTGTELVLAVDYGGRDELTRMTRQLAQQVRDGERSIDEITESLVDESLDTAGLPDVDL 185
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
+IRTGG+ R+S++LLWQ++Y+E F P+ WP+F R+ F AL+++ R RRFGGL+
Sbjct: 186 MIRTGGDIRISNYLLWQISYAELYFTPKCWPEFERDDFQAALDEFAGRQRRFGGLN 241
>gi|53805187|ref|YP_113090.1| undecaprenyl diphosphate synthase [Methylococcus capsulatus str.
Bath]
gi|53758948|gb|AAU93239.1| undecaprenyl diphosphate synthase [Methylococcus capsulatus str.
Bath]
Length = 262
Score = 212 bits (540), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 142/227 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I+MDGNGRWA R LPR AGHR G+ ++V A+ G++ LT+FAFS NWRR
Sbjct: 25 PRHVAIVMDGNGRWAQERYLPRTAGHRAGVGAVRKVVEHCAKRGVEALTLFAFSSENWRR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L S L++ L +N +++R+IG+R + + + + AE TR NTGL
Sbjct: 85 PEQEVSVLMELFLSTLERETEKLHQNGVRLRIIGDRAAFGEALRERMDAAESLTRSNTGL 144
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I +A + + + + G + + + + + L +D+P+PDL IRTGG
Sbjct: 145 QLAIAANYGGRWDIVQAAQTLAEKVRRGELSPEQITADRLQQQLALADLPEPDLFIRTGG 204
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+R+S+FLLWQ+AY+E F P WP+F E A Y R RRFG
Sbjct: 205 ERRISNFLLWQLAYTELYFTPVLWPEFDEEALDLAFEDYAGRQRRFG 251
>gi|323489580|ref|ZP_08094807.1| undecaprenyl pyrophosphate synthetase [Planococcus donghaensis
MPA1U2]
gi|323396711|gb|EGA89530.1| undecaprenyl pyrophosphate synthetase [Planococcus donghaensis
MPA1U2]
Length = 263
Score = 212 bits (540), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 145/229 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH +G++ ++ A E+G+ LT++AFS NW+R
Sbjct: 29 PAHIAIIMDGNGRWAKKRALPRVAGHHEGMKTVRKVTKLANELGVSVLTLYAFSTENWKR 88
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L + FL L + N++V ++G +L L +++A++ T+ NTGL
Sbjct: 89 PKIEVDFLMRLPEEFLTTFLPELVEENVRVEMMGYHENLPKHTLKAIQKAKEATKNNTGL 148
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY SR EI A+K+I + G++ D++ LI L T +P+PDL+IRT G
Sbjct: 149 ILNFALNYGSRAEIVDAVKDIAAQVAKGTLTLDDINEDLITGGLMTKGLPEPDLLIRTSG 208
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+F+LWQ+AY+EF F WPDF+ + A+ Y R+RR+GGL
Sbjct: 209 EVRLSNFMLWQLAYTEFWFTETLWPDFNEDSLLEAIQIYQNRNRRYGGL 257
>gi|311694061|gb|ADP96934.1| undecaprenyl diphosphate synthase [marine bacterium HP15]
Length = 256
Score = 212 bits (540), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 98/231 (42%), Positives = 144/231 (62%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ S P H+ IIMDGN RWA AR L AGH+ G++ +V A G++ LT+FAFS
Sbjct: 13 ADSRPRHVAIIMDGNNRWAKARRLKGVAGHKAGVDAVRAVVETCAREGVEVLTLFAFSSE 72
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+S L+KL L++ L +N+I++R+IG+R + + ++ AE+ TR
Sbjct: 73 NWRRPKDEVSALMKLFLFALEREVRKLHRNDIRLRIIGDRSAFSASLREHMEAAEELTRN 132
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N+ + L IA NY +I++A + + + + SG + D+ LI ++L D+P PDL+I
Sbjct: 133 NSRMTLVIAANYGGHWDITQATRKVAEQVRSGQLAPSDITDDLIQQHLSIGDLPMPDLMI 192
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE+R+S+F+LW +AY+E F P YWPDF +E AL Y R RRFG
Sbjct: 193 RTAGEQRISNFMLWHLAYTELYFSPVYWPDFQQEEMLKALQAYAGRQRRFG 243
>gi|303236414|ref|ZP_07323003.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella disiens
FB035-09AN]
gi|302483386|gb|EFL46392.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella disiens
FB035-09AN]
Length = 257
Score = 212 bits (540), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 144/232 (62%), Gaps = 2/232 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R PR GH+ G+E +I A +G+KNLT++ FS NW R
Sbjct: 20 PEHIAIIMDGNGRWAMERNKPRSFGHQAGVETVRKITAECTRLGVKNLTLYTFSTENWNR 79
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L+ + L+ + KNN++ +VIG+ L ++ L+E D T N +
Sbjct: 80 PTDEVAALMGLVFTSLEDEIFM--KNNVRFQVIGDIKRLPVEVQQRLQETMDHTAKNNAM 137
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ IA +YS+R EI+ A K I Q + G + ++ I+KYL T+ + DPDL+IRTGG
Sbjct: 138 TMTIALSYSARWEITEATKQIAQKVGKGEIKLEEITEDTISKYLCTNFMADPDLLIRTGG 197
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S++LLWQ+AYSE F YWPDF ++ + A+ Y R RRFG K+
Sbjct: 198 EYRISNYLLWQLAYSELYFCDTYWPDFDKKDLYKAIVDYQGRQRRFGKTEKQ 249
>gi|327462763|gb|EGF09085.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sanguinis
SK1057]
Length = 249
Score = 212 bits (540), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 104/233 (44%), Positives = 143/233 (61%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA R PR GH+ G+E ++ AA E+G++ LT++AFS NW R
Sbjct: 17 PKHIAVIMDGNGRWAKKRMQPRVFGHKAGMETLQKVTIAAKEMGVQVLTVYAFSTENWSR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S ++ L F + L KN +K+++IG+ L L++AE T+LNTGL
Sbjct: 77 PEKEVSFIMNLPVEFYDRYVPELHKNKVKIQMIGDTAKLPKATFEALEKAESLTKLNTGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI++A+K I QD+ + D+ +I YL TS++P DPDL+I
Sbjct: 137 ILNFALNYGGRYEINQAVKLIAQDVLDAKLSPGDITEEVIGNYLYTSNLPKMLRDPDLVI 196
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSE F WPDF + A+ +Y+ R+RRFGG+
Sbjct: 197 RTSGELRLSNFLPWQSAYSELYFTDILWPDFDEKALKAAIAEYSRRNRRFGGV 249
>gi|308233715|ref|ZP_07664452.1| undecaprenyl diphosphate synthase [Atopobium vaginae DSM 15829]
gi|328944063|ref|ZP_08241528.1| di-trans,poly-cis-decaprenylcistransferase [Atopobium vaginae DSM
15829]
gi|327492032|gb|EGF23806.1| di-trans,poly-cis-decaprenylcistransferase [Atopobium vaginae DSM
15829]
Length = 259
Score = 212 bits (540), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 98/229 (42%), Positives = 142/229 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA ARGL R GH+ G+ EIV A+ +GIK L+++AFS NW+R
Sbjct: 29 PSHVSIIMDGNGRWAQARGLDRALGHKAGVSSLKEIVTASVRLGIKVLSVYAFSTENWKR 88
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L + L K + N+++R GN +L V K+ QT+ NTG+
Sbjct: 89 PQHEVTLLMHLFATTLVKELPLFAQENVRLRFFGNIDALPATTRKVFKQGLQQTQHNTGM 148
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY R ++ +A ++I ++ G + D+D +++ YL TS +PDPDL+IRT G
Sbjct: 149 VFALAVNYGGRYDLVQAAQSIATQVQDGKLKPSDIDEEVLSSYLYTSGLPDPDLVIRTSG 208
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS++LL+Q+AYSE WPDF++ F A+ Y R RRFGG+
Sbjct: 209 EMRLSNYLLYQIAYSELYITKTLWPDFTKWDFLRAIKSYQERTRRFGGV 257
>gi|332359974|gb|EGJ37788.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sanguinis
SK1056]
Length = 249
Score = 212 bits (540), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 104/233 (44%), Positives = 142/233 (60%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA R PR GH+ G+E + AA E+G++ LT++ FS NW R
Sbjct: 17 PKHIAVIMDGNGRWAKKRMQPRVFGHKAGMETLQRVTIAAKEMGVQVLTVYVFSTENWSR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S ++ L F + L KNN+K+++IG+ L L++AE T+LNTGL
Sbjct: 77 PEKEVSFIMNLPVEFYDRYVPELHKNNVKIQMIGDTAKLPKATFEALEKAESLTKLNTGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI++A+K I QD+ + D+ +I YL TS++P DPDL+I
Sbjct: 137 ILNFALNYGGRYEINQAVKLIAQDVLDAKLSPGDITEEVIGNYLYTSNLPKMLRDPDLVI 196
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSE F WPDF + A+ +Y+ R+RRFGG+
Sbjct: 197 RTSGELRLSNFLPWQSAYSELYFTDILWPDFDEKALKTAIAEYSRRNRRFGGV 249
>gi|332519956|ref|ZP_08396420.1| undecaprenyl diphosphate synthase [Lacinutrix algicola 5H-3-7-4]
gi|332044515|gb|EGI80709.1| undecaprenyl diphosphate synthase [Lacinutrix algicola 5H-3-7-4]
Length = 227
Score = 212 bits (540), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 100/225 (44%), Positives = 149/225 (66%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA +GL R GH G + E V AA E+GI+NLT++AFS NW RP E+
Sbjct: 1 MDGNGRWAKQKGLIRAIGHENGTKSVRETVEAATEIGIENLTLYAFSTENWNRPKLEVDT 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+KL+ S LKK +L++NNI + IG+ +L +L LKE ++T+ NT + L +A +
Sbjct: 61 LMKLLVSSLKKEISTLQENNITLNAIGDLHNLPKKVLKELKEVIEKTKNNTRMTLTLALS 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y SR E+ AIK I +++ + + ++D S+I ++L T ++PD DL+IRT GE+R+S+F
Sbjct: 121 YGSRAEMLNAIKEISLKVKNNIISAENIDESIINEHLYTQNLPDVDLLIRTSGEQRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
LLWQ+AY+E F WPDF+++ A+ +Y R+RRFG S++
Sbjct: 181 LLWQIAYAELYFTNSLWPDFTKQHLCDAIIEYQKRERRFGKTSEQ 225
>gi|78188442|ref|YP_378780.1| di-trans-poly-cis-decaprenylcistransferase [Chlorobium
chlorochromatii CaD3]
gi|78170641|gb|ABB27737.1| Undecaprenyl pyrophosphate synthetase [Chlorobium chlorochromatii
CaD3]
Length = 285
Score = 212 bits (540), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 148/232 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA +G R GH G+ +IV A ++GI LT+F FS NW+R
Sbjct: 40 PQHIAIIMDGNGRWAKMKGKSRMEGHIAGVSSVRDIVEACHQLGIGYLTLFTFSTENWKR 99
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EIS L++L+ + + L +NNI+++VIG L + VL++ + T+ N GL
Sbjct: 100 PEQEISALMQLLIRVIGRESRKLHENNIRLQVIGEMHRLPQKVERVLRDCMELTKENNGL 159
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +YS + ++ +A + I D+++G++ +D + +A YL T+++PDP+L+IRT G
Sbjct: 160 MLNLALSYSGQWDMLQACRAIAADVQAGTLQLEAIDEACMASYLSTAEMPDPELLIRTSG 219
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E RLS+FLLWQ AYSE + YWPDF RE + AL + R+RRFG S++
Sbjct: 220 EFRLSNFLLWQSAYSEIYYTSIYWPDFRREQLYEALYDFQQRERRFGQTSEQ 271
>gi|330720187|gb|EGG98574.1| Undecaprenyl pyrophosphate synthetase [gamma proteobacterium
IMCC2047]
Length = 269
Score = 212 bits (540), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 102/232 (43%), Positives = 144/232 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGN RWA R LP AGH+ G+E ++ A AE+ I LT+FAFS NWRR
Sbjct: 21 PRHVAIIMDGNNRWAKRRSLPSAAGHKAGLESVRSVMRACAELKIDVLTLFAFSSENWRR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L + L++ + KNN ++RVIGNR D I + +AE T N G
Sbjct: 81 PEKEVSALMTLFLTALRQEVKKIHKNNFRLRVIGNRSRFSDKIQQGIADAEKLTANNDGC 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ IA +Y + +I++A +++ D +G + D++ + + + SD+P PDL IRTGG
Sbjct: 141 TVVIAADYGGQWDIAQAAQSLAADACAGKIELSDINEQSLHERICLSDLPMPDLCIRTGG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AY+E F YWPDF RE F+ A+ + RDRRFG S +
Sbjct: 201 EHRISNFLLWQMAYTELYFTDTYWPDFGREAFYEAVADFQRRDRRFGRTSNE 252
>gi|260172136|ref|ZP_05758548.1| undecaprenyl pyrophosphate synthetase [Bacteroides sp. D2]
gi|315920445|ref|ZP_07916685.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|313694320|gb|EFS31155.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 244
Score = 212 bits (540), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 102/232 (43%), Positives = 146/232 (62%), Gaps = 2/232 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG R GHR G E I AA +GIK LT++ FS NW R
Sbjct: 13 PQHVAIIMDGNGRWAKQRGEERTYGHRAGAETVQNITEDAARLGIKYLTLYTFSTENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EI+ L+ L+ +++ +L KNNI+ VIG+ L ++ L ++T N+G+
Sbjct: 73 PQDEIAALMNLLLESIEEE--TLMKNNIRFNVIGDFKKLPVEVQKSLASCIERTSQNSGM 130
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ +A +YSSR EI+ A++ I I++G + + IA +L+T +PDPDL+IRTGG
Sbjct: 131 CMVLALSYSSRWEITEAVRQIATLIKTGEISPEQITDECIASHLETKFMPDPDLLIRTGG 190
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E RLS++LLWQ AYSE F +WPDF++E + A+ +Y R+RRFG S++
Sbjct: 191 EIRLSNYLLWQCAYSELYFCDTFWPDFNKEELYKAIWEYQQRERRFGKTSEQ 242
>gi|167463765|ref|ZP_02328854.1| di-trans,poly-cis-decaprenylcistransferase [Paenibacillus larvae
subsp. larvae BRL-230010]
gi|322382356|ref|ZP_08056263.1| undecaprenyl pyrophosphate synthase-like protein [Paenibacillus
larvae subsp. larvae B-3650]
gi|321153709|gb|EFX46084.1| undecaprenyl pyrophosphate synthase-like protein [Paenibacillus
larvae subsp. larvae B-3650]
Length = 258
Score = 212 bits (539), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 98/229 (42%), Positives = 144/229 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RGLPR AGH G++ +I AA ++G++ LT++AFS NW+R
Sbjct: 30 PKHVAIIMDGNGRWARQRGLPRVAGHHSGMKNVKKITMAANDIGVQVLTMYAFSTENWKR 89
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL + F L +NN++V + G L D L ++ A ++T+ NTGL
Sbjct: 90 PKEEVEFLMKLPQEFFPLEIDELIENNVRVHMTGWCEGLPDHTLKAVEGAIERTKHNTGL 149
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY R E+ + + +D++SG + +D + Y+ T+ +PDPDL+IRT G
Sbjct: 150 ILNFALNYGGRKELLSGVHEVVRDVKSGKLDLSQLDEETFSGYMLTAGLPDPDLLIRTSG 209
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+FLLWQ+AY+E F YWP+F+ F+ A+ +Y R RR+G +
Sbjct: 210 ELRLSNFLLWQLAYTELWFTDAYWPEFTESHFYQAIAEYQRRARRYGAV 258
>gi|163786496|ref|ZP_02180944.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase)
[Flavobacteriales bacterium ALC-1]
gi|159878356|gb|EDP72412.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase)
[Flavobacteriales bacterium ALC-1]
Length = 246
Score = 212 bits (539), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 146/232 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA +G R GH G + + V A+AE+GIKNLT++AFS NW R
Sbjct: 13 PNHVAIIMDGNGRWAKQQGFMRVIGHESGTKSVRQTVEASAELGIKNLTLYAFSTENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL+ LKK +L+ NNIK+ IG L L + ++T+ NT +
Sbjct: 73 PKLEVQTLMKLLVKSLKKEIKTLQDNNIKLAAIGCLDDLPKKAHQELLDVIEKTKNNTNM 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y SR+EI +K + +++ + +D S+I K+L T ++PD DL+IRT G
Sbjct: 133 TLTLALSYGSREEIVNVVKELSLKVKNNIISPESIDESIINKHLYTQNLPDVDLLIRTSG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FLLWQ+AY+E F WPDF +E + AL Y R+RRFG S++
Sbjct: 193 EQRISNFLLWQIAYAELYFTDILWPDFKKENLYEALISYQNRERRFGKTSEQ 244
>gi|229824073|ref|ZP_04450142.1| hypothetical protein GCWU000282_01377 [Catonella morbi ATCC 51271]
gi|229786427|gb|EEP22541.1| hypothetical protein GCWU000282_01377 [Catonella morbi ATCC 51271]
Length = 243
Score = 212 bits (539), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 107/233 (45%), Positives = 144/233 (61%), Gaps = 3/233 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P H+ +IMDGNGRWA R LPR AGH+KG++ +I A ++G+K LT++AFS N
Sbjct: 5 SKVPAHVALIMDGNGRWAKKRFLPRVAGHKKGVDTIKKITKRANQLGVKMLTVYAFSTEN 64
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W+RP E+S L+KL K F K L + N++V IG+ L + VLK+A T
Sbjct: 65 WKRPEQEVSFLMKLPKEFFAKFVPELLEQNVRVETIGDLEGLPEATRKVLKQAIADTAHC 124
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS---DVPDPDL 184
TGL L A NY S+DE+ A++ + + + SG++ D+ LI + L+T+ + +PDL
Sbjct: 125 TGLILNFAINYGSQDELCHAVQTLARQVASGTLKPEDITPDLIGQNLETAKFGSLANPDL 184
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IIRT GE+RLS+FLLWQ AYSEF F WPDF F AL Y R RRFG
Sbjct: 185 IIRTSGEERLSNFLLWQAAYSEFYFTERLWPDFDEGDFDQALAVYASRQRRFG 237
>gi|227513175|ref|ZP_03943224.1| di-trans-poly-cis-decaprenylcistransferase (undecaprenyl
diphosphate synthetase) [Lactobacillus buchneri ATCC
11577]
gi|227524390|ref|ZP_03954439.1| di-trans-poly-cis-decaprenylcistransferase (undecaprenyl
diphosphate synthetase) [Lactobacillus hilgardii ATCC
8290]
gi|227083556|gb|EEI18868.1| di-trans-poly-cis-decaprenylcistransferase (undecaprenyl
diphosphate synthetase) [Lactobacillus buchneri ATCC
11577]
gi|227088621|gb|EEI23933.1| di-trans-poly-cis-decaprenylcistransferase (undecaprenyl
diphosphate synthetase) [Lactobacillus hilgardii ATCC
8290]
Length = 254
Score = 212 bits (539), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 106/235 (45%), Positives = 149/235 (63%), Gaps = 3/235 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGHR+G+E + AA+++G+K LT++AFS NW+R
Sbjct: 20 PKHIAIIMDGNGRWAKKRHLPRIAGHRQGMETVKTVTMAASKLGVKVLTLYAFSTENWKR 79
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L F L +NN+KV V+G L ++ +++A QT TG+
Sbjct: 80 PKDEVSFLMGLPVKFFNNFVPELIENNVKVSVMGLIDQLPENTQKAVRDAISQTSKCTGM 139
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT---SDVPDPDLIIR 187
L A NY SR +I A++NI +I++ ++ D+D LI+++L T D DPDL+IR
Sbjct: 140 ILNFALNYGSRLDIRLAVQNIASEIKNDAISISDIDDDLISRHLMTGFLGDYADPDLLIR 199
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
T GE+R+S+FLLWQ+AYSE VF WPDF + + +Y R+RRFGGL +
Sbjct: 200 TSGEERISNFLLWQIAYSELVFTDALWPDFDGQTLRQMIFEYQHRNRRFGGLKNE 254
>gi|22538054|ref|NP_688905.1| undecaprenyl pyrophosphate synthase [Streptococcus agalactiae
2603V/R]
gi|42559981|sp|Q8DXD5|UPPS_STRA5 RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|22534958|gb|AAN00778.1|AE014278_5 undecaprenyl diphosphate synthase [Streptococcus agalactiae
2603V/R]
Length = 250
Score = 212 bits (539), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 107/233 (45%), Positives = 141/233 (60%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA R PR GH+ G++ E+ AA+ +G+K LT++AFS NW R
Sbjct: 18 PAHIGIIMDGNGRWAKKRLKPRVMGHKAGMDALQEVTIAASGLGVKVLTVYAFSTENWSR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ ++ L F K L KNN++V+VIG+ L ++ A +T+ N+GL
Sbjct: 78 PDDEVKFIMNLPVKFFDKYVPELDKNNVRVQVIGDTHKLPKATYDAMQRACLRTKHNSGL 137
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI+ AIK I QD+ + D+ L+A +L T+ +P DPDLII
Sbjct: 138 VLNFALNYGGRSEITNAIKEIAQDVLEAKLNPDDITEDLVANHLMTNSLPYLYRDPDLII 197
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSEF F P WPDF ++ A+ YN R RRFG +
Sbjct: 198 RTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKDELHKAIVDYNQRHRRFGSV 250
>gi|191638567|ref|YP_001987733.1| Di-trans-poly-cis-decaprenylcistransferase (Undecaprenyl
diphosphate synthetase) [Lactobacillus casei BL23]
gi|190712869|emb|CAQ66875.1| Di-trans-poly-cis-decaprenylcistransferase (Undecaprenyl
diphosphate synthetase) [Lactobacillus casei BL23]
gi|327382605|gb|AEA54081.1| Undecaprenyl diphosphate synthase [Lactobacillus casei LC2W]
gi|327385803|gb|AEA57277.1| Undecaprenyl diphosphate synthase [Lactobacillus casei BD-II]
Length = 250
Score = 212 bits (539), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 106/234 (45%), Positives = 142/234 (60%), Gaps = 3/234 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R PR AGH++G++ I AA+ +G+K LT++AFS NW+R
Sbjct: 17 PAHIAIIMDGNGRWAKRRFFPRVAGHKQGMQNVKTITKAASRLGVKVLTLYAFSTENWKR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE++ L++L F L K N+KV V+G L ++A T NTG+
Sbjct: 77 PGSEVNYLMRLPVDFFNDFMPDLIKENVKVEVMGELDDLPPQTRQASEKAMADTANNTGM 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT---SDVPDPDLIIR 187
L A NY RDE+ A + + + ++ G + D+D A L T D+ DPDL+IR
Sbjct: 137 ILNFALNYGGRDELVHAAQKLAKQVQEGELSPDDIDDRHFANALMTGFLGDLADPDLLIR 196
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
T GE R+S+FLLWQ+AYSE VF+ +YWPDFS A+ +Y RDRRFGGL K
Sbjct: 197 TSGELRISNFLLWQIAYSELVFVDDYWPDFSPAALEAAIAEYQARDRRFGGLKK 250
>gi|116495064|ref|YP_806798.1| undecaprenyl pyrophosphate synthase [Lactobacillus casei ATCC 334]
gi|116105214|gb|ABJ70356.1| Undecaprenyl pyrophosphate synthetase [Lactobacillus casei ATCC
334]
Length = 250
Score = 212 bits (539), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 106/234 (45%), Positives = 142/234 (60%), Gaps = 3/234 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R PR AGH++G++ I AA+ +G+K LT++AFS NW+R
Sbjct: 17 PAHIAIIMDGNGRWAKRRFFPRVAGHKQGMQNVKTITKAASRLGVKVLTLYAFSTENWKR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE++ L++L F L K N+KV V+G L ++A T NTG+
Sbjct: 77 PGSEVNYLMRLPVDFFNDFMPDLIKENVKVEVMGELDDLPPQTRQASEKAMADTANNTGM 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT---SDVPDPDLIIR 187
L A NY RDE+ A + + + ++ G + D+D A L T D+ DPDL+IR
Sbjct: 137 ILNFALNYGGRDELVHAAQKLAKQVQEGELSPDDIDDRHFANALMTGFLGDLADPDLLIR 196
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
T GE R+S+FLLWQ+AYSE VF+ +YWPDFS A+ +Y RDRRFGGL K
Sbjct: 197 TSGELRISNFLLWQIAYSELVFVDDYWPDFSPAALETAIAEYQARDRRFGGLKK 250
>gi|125718861|ref|YP_001035994.1| undecaprenyl pyrophosphate synthetase [Streptococcus sanguinis
SK36]
gi|125498778|gb|ABN45444.1| Undecaprenyl pyrophosphate synthetase, putative [Streptococcus
sanguinis SK36]
Length = 249
Score = 212 bits (539), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 104/233 (44%), Positives = 142/233 (60%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA R PR GH+ G+E + AA E+G++ LT++AFS NW R
Sbjct: 17 PKHIAVIMDGNGRWAKKRMQPRVFGHKAGMETLQRVTIAAKEMGVQVLTVYAFSTENWSR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S ++ L F + L KN +K+++IG+ L L++AE T+LNTGL
Sbjct: 77 PEKEVSFIMNLPVEFYDRYVPELHKNKVKIQMIGDTAKLPKATFEALEKAESLTKLNTGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI++A+K I QD+ + D+ +I YL TS++P DPDL+I
Sbjct: 137 ILNFALNYGGRYEINQAVKLIAQDVLDAKLSPGDITEEVIGNYLYTSNLPKMLRDPDLVI 196
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSE F WPDF + A+ +Y+ R+RRFGG+
Sbjct: 197 RTSGELRLSNFLPWQSAYSELYFTDILWPDFDEKALKAAIAEYSRRNRRFGGV 249
>gi|25011942|ref|NP_736337.1| undecaprenyl pyrophosphate synthase [Streptococcus agalactiae
NEM316]
gi|42559984|sp|Q8E359|UPPS_STRA3 RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|24413484|emb|CAD47562.1| Unknown [Streptococcus agalactiae NEM316]
Length = 250
Score = 212 bits (539), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 107/233 (45%), Positives = 141/233 (60%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA R PR GH+ G++ E+ AA+ +G+K LT++AFS NW R
Sbjct: 18 PAHIGIIMDGNGRWAKKRLKPRVMGHKAGMDALQEVTIAASGLGVKVLTVYAFSTENWSR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ ++ L F K L KNN++V+VIG+ L ++ A +T+ N+GL
Sbjct: 78 PDDEVKFIMNLPVEFFDKYVPELDKNNVRVQVIGDTHKLPKATYDAMQRACLRTKHNSGL 137
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI+ AIK I QD+ + D+ L+A +L T+ +P DPDLII
Sbjct: 138 VLNFALNYGGRSEITNAIKEIAQDVLEAKLNPDDITEDLVANHLMTNSLPYLYRDPDLII 197
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSEF F P WPDF ++ A+ YN R RRFG +
Sbjct: 198 RTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKDELHKAIVDYNQRHRRFGSV 250
>gi|297568949|ref|YP_003690293.1| undecaprenyl diphosphate synthase [Desulfurivibrio alkaliphilus
AHT2]
gi|296924864|gb|ADH85674.1| undecaprenyl diphosphate synthase [Desulfurivibrio alkaliphilus
AHT2]
Length = 244
Score = 212 bits (539), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 98/240 (40%), Positives = 146/240 (60%), Gaps = 3/240 (1%)
Query: 6 MSSSP---PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
M+ P P H+ IIMDGNGRWA +G PR GH+ G+ +V A E+ ++ LT++A
Sbjct: 1 MTHDPANLPRHVAIIMDGNGRWAHQQGKPRIMGHQAGVRSVQAVVRCAGELNLEALTLYA 60
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW+RP E+ L+ L+K++L+ + +N +++R G+ L + +L+
Sbjct: 61 FSTENWQRPGPEVEGLMGLLKTYLESQLEQMVQNRVRLRTCGHIDRLPTKVRRILENTIR 120
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
+T N GL L +A +Y RDE+ RA + + + G + ++ +A LDT+++PDP
Sbjct: 121 ETADNDGLILNLALSYGGRDELIRAARKLAARVADGELTPAQINEQTLAAELDTAELPDP 180
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL+IRTGGE+RLS+FLLWQ++YSE F WPDF RE F AL Y R RRFG L+ +
Sbjct: 181 DLLIRTGGERRLSNFLLWQLSYSELYFTRTLWPDFGREQFLAALTDYQQRQRRFGRLNDQ 240
>gi|329956194|ref|ZP_08296874.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides clarus YIT
12056]
gi|328524668|gb|EGF51729.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides clarus YIT
12056]
Length = 244
Score = 212 bits (539), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 103/232 (44%), Positives = 148/232 (63%), Gaps = 2/232 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG R GH+ G E + I A+++GIK LT++ FS NW R
Sbjct: 13 PQHVAIIMDGNGRWAKLRGQERSFGHQAGAETVHIIAEEASKLGIKYLTLYTFSTENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E++ L+ L+ +++ + KNNI+ R+IG+ L ++ L+ T NTG+
Sbjct: 73 PSNEVAALMALLFDSIEEE--TFMKNNIRFRIIGDLTKLPANVRERLETCVAHTVNNTGM 130
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L +A +YSSR EI+ A + I I G + +DS+L++++L TS +PDPDL+IRTGG
Sbjct: 131 SLVLAISYSSRWEITEATRQIATLIHKGELTPGQIDSNLVSQHLTTSFMPDPDLLIRTGG 190
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E RLS++LLWQ AYSE F YWPDF E + A+ Y R+RRFG S++
Sbjct: 191 EVRLSNYLLWQCAYSELYFCDTYWPDFREEELYKAIYDYQKRERRFGKTSEQ 242
>gi|222151093|ref|YP_002560247.1| undecaprenyl pyrophosphate synthetase [Macrococcus caseolyticus
JCSC5402]
gi|222120216|dbj|BAH17551.1| undecaprenyl pyrophosphate synthetase [Macrococcus caseolyticus
JCSC5402]
Length = 249
Score = 212 bits (539), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 101/229 (44%), Positives = 146/229 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA A+ +PR GH +G++ +I A+++G++ LT++AFS NW R
Sbjct: 21 PKHIAIIMDGNGRWAKAKKMPRIKGHYEGMQTVKKITGHASDLGVEYLTLYAFSTENWSR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+KL FL L N+KV IG L + + EA+++T+ NTGL
Sbjct: 81 PKDEVNYLMKLPGDFLNTFLPELVAKNVKVETIGFIDDLPEHTKHAVLEAKERTKDNTGL 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY R EI A++ I + +SG + +++ S ++L T +PDP+L+IRT G
Sbjct: 141 KLVFALNYGGRKEIISAVQLIAEQYKSGEISLDEINESQFNEFLFTKGMPDPELLIRTSG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+RLS+FL+WQ +YSEFVF+ EYWPDF+ + ++ Y R RRFGGL
Sbjct: 201 EERLSNFLIWQCSYSEFVFVDEYWPDFTVQSLDKCISIYQNRHRRFGGL 249
>gi|16126162|ref|NP_420726.1| undecaprenyl diphosphate synthase [Caulobacter crescentus CB15]
gi|221234933|ref|YP_002517369.1| undecaprenyl pyrophosphate synthetase [Caulobacter crescentus
NA1000]
gi|42559870|sp|Q9A707|UPPS_CAUCR RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|13423372|gb|AAK23894.1| undecaprenyl diphosphate synthase [Caulobacter crescentus CB15]
gi|220964105|gb|ACL95461.1| undecaprenyl pyrophosphate synthetase [Caulobacter crescentus
NA1000]
Length = 259
Score = 211 bits (538), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 95/228 (41%), Positives = 138/228 (60%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA RG+PR GHR G+ V A + LT+F FS NW RP
Sbjct: 24 HVAIIMDGNGRWAKQRGMPRVLGHRAGVNALKRTVEGAQSQNVGVLTVFGFSTENWSRPP 83
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+SEL+ L+K++++ L K ++VR+IG R L DI V++ AE +T N+ L
Sbjct: 84 QEVSELMGLLKAYVESDLERLAKAGVRVRIIGRRTGLSPDIAEVIERAERRTAQNSEFVL 143
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+AFNY + +I+ A + + +E G + D++ ++L T+ P PDLI+RT GE+
Sbjct: 144 QVAFNYGGQADITDAARAFAERVERGEAKASDLNEKTFEQFLSTASAPPPDLIVRTSGER 203
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
R+S+FLLW AY+E VF WPD+ E A+ +Y RDRR+GG++
Sbjct: 204 RISNFLLWDCAYAELVFQDVLWPDYGPEALAAAIAEYRGRDRRYGGVA 251
>gi|260767821|ref|ZP_05876756.1| undecaprenyl pyrophosphate synthetase [Vibrio furnissii CIP 102972]
gi|260617330|gb|EEX42514.1| undecaprenyl pyrophosphate synthetase [Vibrio furnissii CIP 102972]
gi|315179349|gb|ADT86263.1| undecaprenyl diphosphate synthase [Vibrio furnissii NCTC 11218]
Length = 250
Score = 211 bits (538), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 100/238 (42%), Positives = 151/238 (63%), Gaps = 1/238 (0%)
Query: 1 MVASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
M S +SS P HI IIMDGNGRWA A+G PR GH+ G+ + ++ AA++GIK +T
Sbjct: 1 MQNSQLSSDVLPQHIAIIMDGNGRWAKAQGKPRVFGHKNGVAAVRKTISTAAKLGIKAVT 60
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
+FAFS NWRRP E+ L++L + L L KNN+++R+IG++ + + +
Sbjct: 61 LFAFSSENWRRPEEEVGVLMELFITVLSTEVKKLHKNNLRLRIIGDKSRFSERLQAKIAH 120
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV 179
AE T NTGL + IA NY + +I++A ++I + G + D+D +LI ++L +D+
Sbjct: 121 AEALTANNTGLVVNIAANYGGKWDITQAARDIAVKVARGEISPTDIDEALITEHLTMADI 180
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
P+ DL+IRT GE R+S+F+LWQ+AY+E F P YWP+F + A+ + R+RRFG
Sbjct: 181 PEVDLLIRTSGECRISNFMLWQLAYAEMYFTPVYWPEFGEDSLIEAVTWFVNRERRFG 238
>gi|149928180|ref|ZP_01916425.1| undecaprenyl pyrophosphate synthetase [Limnobacter sp. MED105]
gi|149823071|gb|EDM82311.1| undecaprenyl pyrophosphate synthetase [Limnobacter sp. MED105]
Length = 262
Score = 211 bits (538), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 96/236 (40%), Positives = 156/236 (66%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+S+ P H+ I+MDGNGRWA +R +PR AGH++G++ V A E+G+++LT+FAFS
Sbjct: 14 TSNIPKHVAIVMDGNGRWAKSRLMPRFAGHKRGVDAVKRTVQACCELGVEHLTLFAFSSE 73
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+S L++L L+K ++ + NI +R+IG+ + + ++ + AE+ T+
Sbjct: 74 NWRRPEEEVSLLMRLFIRVLRKDVEAMHRENICLRIIGDTTAFEPELQAAISSAEELTKN 133
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NT L L IA NY R +I +A K++ + + + + + ++++L P+PDL I
Sbjct: 134 NTRLFLNIAANYGGRWDILQATKSMLKCNPELANNPNQISETDLSRHLCLQGSPEPDLFI 193
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE+R+S+FLLWQ+AY+EF F ++WPDF + + A++ YN R+RRFG S++
Sbjct: 194 RTGGEQRVSNFLLWQLAYTEFYFTDKFWPDFGKPMLLEAIDSYNNRERRFGRTSEQ 249
>gi|56459949|ref|YP_155230.1| undecaprenyl pyrophosphate synthase [Idiomarina loihiensis L2TR]
gi|56178959|gb|AAV81681.1| Undecaprenyl pyrophosphate synthase [Idiomarina loihiensis L2TR]
Length = 257
Score = 211 bits (538), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 148/232 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG R GH+ G E + VA A GI++LT+FAFS NW+R
Sbjct: 12 PKHVAIIMDGNGRWAKQRGKIRTFGHKAGAEAVRKAVAFARRNGIESLTLFAFSSENWKR 71
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+S L++L S LK L N+I++R++G++ + + + EAE+QTR N+GL
Sbjct: 72 PATEVSVLMELFMSVLKSEIKKLDDNDIRLRIVGDKEAFSKRLQKRMSEAEEQTRSNSGL 131
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL IA NY + +I++A + + + +++G + ++ IA L +D P PDL+IRTGG
Sbjct: 132 NLNIAANYGGQWDITQASRRLAERVKAGEIEPAEITEQTIAGELMMADQPLPDLLIRTGG 191
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AY+E F WPDF F A+ + R+RRFG S++
Sbjct: 192 EHRISNFLLWQLAYAELYFTSVLWPDFDDTAFAQAITDFAQRERRFGLTSEQ 243
>gi|327403113|ref|YP_004343951.1| Undecaprenyl pyrophosphate synthase [Fluviicola taffensis DSM
16823]
gi|327318621|gb|AEA43113.1| Undecaprenyl pyrophosphate synthase [Fluviicola taffensis DSM
16823]
Length = 245
Score = 211 bits (538), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 103/232 (44%), Positives = 143/232 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA +G R GH G++ + A +VG+K +T++AFS NW R
Sbjct: 13 PKHIAIIMDGNGRWAKKQGQERLYGHSFGVDSVRATLTACKDVGVKFVTMYAFSTENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L+ + L N+K+ IG+ L +D LK A + T+ NTG+
Sbjct: 73 PQDEVEGLMSLLVYTIANEVNELNAQNVKLLSIGDTAGLPEDCQDELKNAIESTKNNTGV 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL IA NYSSR EI+ A K + +I++G + ++ LI+ L T +PDP+L+IRT G
Sbjct: 133 NLVIALNYSSRWEIAEAFKQLASNIQAGDLTISEITPELISSTLSTKHIPDPELLIRTSG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+RLS+FLLWQVAYSEF F P WPDF + A+ Y R+RRFG +S++
Sbjct: 193 EQRLSNFLLWQVAYSEFYFTPVLWPDFREVDLYKAVLDYQSRERRFGMVSEQ 244
>gi|85859434|ref|YP_461636.1| undecaprenyl pyrophosphate synthetase [Syntrophus aciditrophicus
SB]
gi|85722525|gb|ABC77468.1| undecaprenyl pyrophosphate synthetase [Syntrophus aciditrophicus
SB]
Length = 261
Score = 211 bits (538), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 102/232 (43%), Positives = 145/232 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA L R GH+KG E + V E+G+K LT++AFSI NW R
Sbjct: 22 PRHIAIIMDGNGRWAEKHTLGRIFGHKKGAEAVHVAVRTCRELGVKYLTLYAFSIENWFR 81
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EI+ L+ L++ +L + + I+++VIG+ SL D + L++ D+T N +
Sbjct: 82 PTIEINALMNLLEEYLSSQLEEMMEYRIRLKVIGDFNSLRDSVKKKLRDVMDKTASNDAM 141
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y RDEI A+K I +D G + ++D L + YL T+++PDPDL+IRT G
Sbjct: 142 TLTLALSYGGRDEILSAVKQILKDGMEGRIKPENLDRELFSHYLYTAEMPDPDLLIRTSG 201
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+F LWQ+AY+EF F WPDFSR+ A+ Y R+RRFG S++
Sbjct: 202 EYRISNFCLWQIAYTEFHFTEVLWPDFSRDDMIRAIADYQSRERRFGMTSEQ 253
>gi|126659957|ref|ZP_01731080.1| Di-trans-poly-cis-decaprenylcistransferase [Cyanothece sp. CCY0110]
gi|126618722|gb|EAZ89468.1| Di-trans-poly-cis-decaprenylcistransferase [Cyanothece sp. CCY0110]
Length = 259
Score = 211 bits (538), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 143/232 (61%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+S P H+ +IMDGNGRWA +GLPR GHR+G + ++ ++GI LT +AFS N
Sbjct: 16 NSLPHHVAVIMDGNGRWATQQGLPRITGHRQGAKTLKNLLRCCYDLGIGELTAYAFSTEN 75
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP EI+ L+ L + LK+ L + +I++ IG+ L + ++ + ++T+ N
Sbjct: 76 WRRPSEEINFLMLLFEQLLKQELEQLHRESIRISFIGDLSILPSSLQQIMALSREKTQKN 135
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L+ +A NY SR EI A + I Q + G++ +D ++ +YL TS+ DPDL+IR
Sbjct: 136 QALHFRLAINYGSRQEIVHACRQIVQQVHQGNLTLETLDEAVFQQYLSTSEGSDPDLLIR 195
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
T GE RLS++LLWQ+AY+E F +WPDFS F+ AL Y R+RRFG L
Sbjct: 196 TSGEMRLSNYLLWQMAYTEIYFTDVFWPDFSPSHFYEALWHYQQRNRRFGRL 247
>gi|198283288|ref|YP_002219609.1| undecaprenyl diphosphate synthase [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|198247809|gb|ACH83402.1| undecaprenyl diphosphate synthase [Acidithiobacillus ferrooxidans
ATCC 53993]
Length = 253
Score = 211 bits (538), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 108/235 (45%), Positives = 157/235 (66%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + + P HI +IMDGNGRWA R LPR AGHR+G EV E+V + A++GI LT+FA
Sbjct: 4 ADLTPPAMPRHIAVIMDGNGRWAYRRHLPRVAGHRRGAEVVREMVQSCADLGIPYLTLFA 63
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP E+ L+ L + L++ L +N +++R+IG+R +LD +I ++ EAE
Sbjct: 64 FSTENWRRPAIEVRLLMNLFRLLLRREARKLHENGVRLRIIGDRSALDPEICQLIDEAEA 123
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
TR N L L +A NY R +I++A + +++G + D ++ IA++L +D+P+P
Sbjct: 124 LTRNNQRLQLNLAVNYGGRWDIAQAARAAMAAVQAGDLALEDFSAAHIARHLCLADIPEP 183
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRTGGE+R+S+FLLWQ+AY+EF F WPDF+R HAL+ + R RRFG
Sbjct: 184 DLLIRTGGEERISNFLLWQLAYTEFYFSDTLWPDFNRAALEHALHSFAHRQRRFG 238
>gi|20429122|emb|CAD24431.1| undecaprenyl-diphosphate synthase [Paracoccus zeaxanthinifaciens]
Length = 245
Score = 211 bits (538), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 99/228 (43%), Positives = 139/228 (60%), Gaps = 2/228 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG PR GHR+G E +IV A E+G+ LTI+AFS NW+R
Sbjct: 19 PRHVAIIMDGNGRWATERGWPRLVGHRRGAERVKQIVRACPELGVDWLTIYAFSTENWKR 78
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+K+ + ++++ + +++R IG R LD + ++ E +T NT L
Sbjct: 79 STEEVLGLMKIFRRYIEREAVGMASEGVRMRFIGGRERLDRKLQDLMASIEARTAGNTRL 138
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL +A NY RDE++RA + + I +G + + +A +DT+ PDPDL+IRT G
Sbjct: 139 NLTVAINYGGRDELTRASTRLARKIAAGEI--ETPTEADLADCMDTAGHPDPDLVIRTSG 196
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E R S+FL WQ AYSE+ F P WPDF+ + L Y +RDRRFGG
Sbjct: 197 ETRTSNFLPWQAAYSEYEFTPTLWPDFTPQHLSDILGNYGMRDRRFGG 244
>gi|114768799|ref|ZP_01446425.1| undecaprenyl diphosphate synthase [alpha proteobacterium HTCC2255]
gi|114549716|gb|EAU52597.1| undecaprenyl diphosphate synthase [alpha proteobacterium HTCC2255]
Length = 241
Score = 211 bits (537), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 104/229 (45%), Positives = 145/229 (63%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ ++MDGNGRWA R L R GH KG + IV A+ ++ + +LT+FAFS NW+R
Sbjct: 13 HVAMVMDGNGRWANERALARLKGHAKGADRVRHIVRASLDMKVTHLTLFAFSTENWKRSE 72
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
SE+ L+ L K F+K L N +KVR IGNR LD I+ ++ E E T+ N LNL
Sbjct: 73 SEVIGLMGLFKKFMKSEAKKLLINGVKVRFIGNRSRLDKSIIKLMDELEFLTKENDNLNL 132
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA NY RDEI RA K I + ++ G + D++ + + LDT ++PDPDL+IRT GE
Sbjct: 133 TIALNYGGRDEIVRATKKISEKVKLGLIDIDDINIEMFSNNLDTFELPDPDLVIRTSGEL 192
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
R S+FL WQ AYSE+VF WPDF+++++ L ++ R+RRFG + K
Sbjct: 193 RTSNFLPWQCAYSEYVFEKSNWPDFNKDIYEEILIEFKTRERRFGAILK 241
>gi|78222468|ref|YP_384215.1| undecaprenyl pyrophosphate synthase [Geobacter metallireducens
GS-15]
gi|78193723|gb|ABB31490.1| Undecaprenyl pyrophosphate synthetase [Geobacter metallireducens
GS-15]
Length = 246
Score = 211 bits (537), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 102/232 (43%), Positives = 144/232 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA R L R GH+KG+E IV + +GIK LT+FAFS NW R
Sbjct: 10 PRHLAVIMDGNGRWAQERMLKRIIGHQKGVETVRVIVEECSRLGIKYLTLFAFSAENWLR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L+ L+K +++ + +NI+ VIG R L D+ ++EA D+T NTG+
Sbjct: 70 PKTEVKALMSLLKKYIRVETARMLDSNIRFNVIGAREELPPDVNQAVQEAIDRTARNTGM 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y +R EI A + I D+ SG + D+D + YL TS +PDPD +IRT G
Sbjct: 130 VLTLALSYGARQEILLAAERIAADLSSGHLSLGDIDEKTFSSYLFTSGMPDPDFLIRTSG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AY+E F WP+F+ + AL+ Y R+RRFG S +
Sbjct: 190 EMRISNFLLWQLAYTELYFTEVNWPEFTAKELHRALHDYQSRERRFGRTSAQ 241
>gi|295132496|ref|YP_003583172.1| undecaprenyl-pyrophosphate synthetase [Zunongwangia profunda
SM-A87]
gi|294980511|gb|ADF50976.1| undecaprenyl-pyrophosphate synthetase [Zunongwangia profunda
SM-A87]
Length = 246
Score = 211 bits (537), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 99/232 (42%), Positives = 150/232 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA +G R GH +G++ +IV A++GIK LT++AFS NW R
Sbjct: 13 PSHIAVIMDGNGRWAKKQGFLRAVGHNEGVKSVRDIVEGGAQIGIKFLTLYAFSTENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+K++ S LKK +L+ NNIK+ IGN +L L + ++T+ N +
Sbjct: 73 PKLEVDTLMKILVSSLKKEIKTLQDNNIKLTAIGNIDNLPKKAKRELLDVIEKTKHNAKM 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y SR+EI+ A+K + ++ G++ ++ SLI++ L T D+PD DL+IRT G
Sbjct: 133 TLILALSYGSREEITSAVKALANKVKEGTLEPDKINDSLISESLYTKDIPDVDLMIRTSG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FLLWQ+AY+E F WPDF ++ + A+ Y R+RRFG S++
Sbjct: 193 EQRISNFLLWQMAYAELYFTSILWPDFRKDNLYEAIYNYQNRERRFGKTSEQ 244
>gi|227534925|ref|ZP_03964974.1| Di-trans-poly-cis-decaprenylcistransferase (undecaprenyl
diphosphate synthetase) [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|227187681|gb|EEI67748.1| Di-trans-poly-cis-decaprenylcistransferase (undecaprenyl
diphosphate synthetase) [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
Length = 263
Score = 211 bits (537), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 106/234 (45%), Positives = 141/234 (60%), Gaps = 3/234 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R PR AGH++G+ I AA+ +G+K LT++AFS NW+R
Sbjct: 30 PAHIAIIMDGNGRWAKRRFFPRVAGHKQGMHNVKTITKAASRLGVKVLTLYAFSTENWKR 89
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE++ L++L F L K N+KV V+G L ++A T NTG+
Sbjct: 90 PGSEVNYLMRLPVDFFNDFMPDLIKENVKVEVMGELDDLPPQTRQASEKAMADTANNTGM 149
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT---SDVPDPDLIIR 187
L A NY RDE+ A + + + ++ G + D+D A L T D+ DPDL+IR
Sbjct: 150 ILNFALNYGGRDELVHAAQKLAKQVQEGELSPDDIDDRHFANALMTGFLGDLADPDLLIR 209
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
T GE R+S+FLLWQ+AYSE VF+ +YWPDFS A+ +Y RDRRFGGL K
Sbjct: 210 TSGELRISNFLLWQIAYSELVFVDDYWPDFSPAALEAAIAEYQARDRRFGGLKK 263
>gi|284048713|ref|YP_003399052.1| undecaprenyl diphosphate synthase [Acidaminococcus fermentans DSM
20731]
gi|283952934|gb|ADB47737.1| undecaprenyl diphosphate synthase [Acidaminococcus fermentans DSM
20731]
Length = 263
Score = 211 bits (537), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 99/232 (42%), Positives = 145/232 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA A+G PR GH G IV A +GIK L+++AFS NW+R
Sbjct: 32 PCHVAIIMDGNGRWARAQGKPRTFGHAAGARTLRRIVKFADHLGIKALSVYAFSTENWKR 91
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
PV+E+ ++ L+ +L + N+++R +G+R L + + A D T+ NTG+
Sbjct: 92 PVTEVRFIMDLLCQYLTSELEEFNQYNVRIRFMGSREGLPAIVQEKMDHALDVTKDNTGI 151
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY + E+ A++ I ++ G++ ++ I ++L T +P PDL+IRTGG
Sbjct: 152 ILNIAINYGGQRELVEAVREIAGSVQQGTLTPDAINEKTIEEHLYTRGLPAPDLLIRTGG 211
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+ R+S+F+LWQ+AYSEF P +WPDFS EL A+ Y RDRRFGGL++K
Sbjct: 212 DLRVSNFMLWQIAYSEFWTTPVFWPDFSEELLTEAVFSYQKRDRRFGGLNQK 263
>gi|116622347|ref|YP_824503.1| undecaprenyl pyrophosphate synthetase [Candidatus Solibacter
usitatus Ellin6076]
gi|116225509|gb|ABJ84218.1| Undecaprenyl pyrophosphate synthetase [Candidatus Solibacter
usitatus Ellin6076]
Length = 279
Score = 211 bits (536), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 104/231 (45%), Positives = 144/231 (62%), Gaps = 1/231 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH+ GI V A +G+K LT++AFS+ NW+R
Sbjct: 27 PAHIAIIMDGNGRWAGRRLLPRVAGHKAGIGPVRSTVETCARLGVKALTLYAFSVENWKR 86
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L +L++ +LK+ L+KN+I+++ IG +L + L A + T N GL
Sbjct: 87 PRAEVETLWRLLRYYLKQELPDLQKNDIRLQAIGRLDALPMQVRRELDSAVESTSANRGL 146
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIE-SGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ +A NY R EI A+ +I + GS+ + +D LIA L T+ PDPDL+IRT
Sbjct: 147 LVNLAINYGGRAEIVDAVNSILEMARLEGSLDTLKMDEDLIATSLYTASCPDPDLLIRTS 206
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
GE R+S+FLLWQ+AY+E WPDF+R A+ +Y RDRR+GGLS
Sbjct: 207 GEMRISNFLLWQIAYAELYVTETLWPDFTRTDLLRAVLEYQKRDRRYGGLS 257
>gi|332706087|ref|ZP_08426159.1| undecaprenyl pyrophosphate synthetase [Lyngbya majuscula 3L]
gi|332355179|gb|EGJ34647.1| undecaprenyl pyrophosphate synthetase [Lyngbya majuscula 3L]
Length = 246
Score = 211 bits (536), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 142/227 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA RGLPR GHR+G+E +++ + GIK LT +AFS NW R
Sbjct: 18 PRHVAVIMDGNGRWAKRRGLPRVIGHRQGVEALKKLLRCCDDWGIKALTAYAFSTENWGR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P+ E+ L+ L + L + + + N++++ +GN +L + ++ + ++T NTG+
Sbjct: 78 PLEEVEFLMTLFERVLARELQEMMEENVRIQFVGNLTALPQSLQAQIEHSMNETLNNTGI 137
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY +R EI +A + I ++ G + D+D +L +++L T++V DPDL+IRT G
Sbjct: 138 QFTVATNYGARQEIIQACRAIATQVQLGHIQPDDIDEALFSRHLYTANVCDPDLLIRTSG 197
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E RLS+FLLWQ+AY E WPDF R F AL+ Y R+RRFG
Sbjct: 198 EMRLSNFLLWQMAYGELYITDTLWPDFDRGQFHRALSTYQQRERRFG 244
>gi|15606475|ref|NP_213855.1| hypothetical protein aq_1248 [Aquifex aeolicus VF5]
gi|6136141|sp|O67291|UPPS_AQUAE RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|2983689|gb|AAC07254.1| hypothetical protein aq_1248 [Aquifex aeolicus VF5]
Length = 231
Score = 211 bits (536), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 103/232 (44%), Positives = 146/232 (62%), Gaps = 6/232 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
MS P+H+ IIMDGNGRWA RGLPR AGH +G EV +I+ E+GIK+LT+FAFS
Sbjct: 1 MSLKLPEHVAIIMDGNGRWARQRGLPRVAGHYRGAEVAEDIIEYCIELGIKHLTLFAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+ L +L++++++ L ++VR+IG R L ++ +++E E ++
Sbjct: 61 ENWNRPKEEVKALFELMENYIRSKREKLYSLGVRVRLIGRRDRLSRGLVNLMEELESDSK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
L L +A +Y RD+I RA+K I + V +D +++LD S PDPDL+
Sbjct: 121 DFKNLFLNVAIDYGGRDDILRAVKKIME------VQPSKLDEETFSQFLDLSCSPDPDLL 174
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRT GEKR+S+FLLW +AY+E F WPDF+RE F AL Y+ R R+FG
Sbjct: 175 IRTAGEKRISNFLLWNLAYTELYFTDTLWPDFTREEFMKALEDYSRRKRKFG 226
>gi|323701851|ref|ZP_08113521.1| undecaprenyl diphosphate synthase [Desulfotomaculum nigrificans DSM
574]
gi|323533155|gb|EGB23024.1| undecaprenyl diphosphate synthase [Desulfotomaculum nigrificans DSM
574]
Length = 262
Score = 211 bits (536), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 103/232 (44%), Positives = 144/232 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA RG PR GHR G+E +V A +E+ +K LT +AFS NW+R
Sbjct: 31 PKHIAIIMDGNGRWAQRRGWPRSFGHRAGVESLRGVVKACSELDVKFLTCYAFSTENWKR 90
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L+ +L+K L +NN+K+ IG L L +A +T NTGL
Sbjct: 91 PEEEVSFLMGLLVEYLEKEMDELHQNNVKIYAIGGLHELPQRAQDALNKAFTKTANNTGL 150
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY R E+++AI I + + GS+ +++ L+++ L T+ +PDPDL+IR G
Sbjct: 151 TLNLALNYGGRSELTQAIVKIAKAVADGSIQLSEINEQLVSENLFTAGMPDPDLLIRPSG 210
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+ R+S+FLLWQ+AY+EF WPDF + A+ Y R+RRFGGL KK
Sbjct: 211 DFRISNFLLWQLAYTEFWLSDVMWPDFKKIHLLQAIVDYQQRERRFGGLKKK 262
>gi|110598889|ref|ZP_01387140.1| undecaprenyl diphosphate synthase [Chlorobium ferrooxidans DSM
13031]
gi|110339502|gb|EAT58026.1| undecaprenyl diphosphate synthase [Chlorobium ferrooxidans DSM
13031]
Length = 282
Score = 211 bits (536), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 102/236 (43%), Positives = 151/236 (63%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S P HI IIMDGNGRWA +G R GH G++ ++V AA+++GIK LT+F FS
Sbjct: 36 SCQLPCHIAIIMDGNGRWARLKGKTRLEGHIAGVDSVRDVVEAASQLGIKYLTLFTFSTE 95
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP EIS L++L+ + + L NNI++ VIGN L + + VL+ + T+
Sbjct: 96 NWNRPEKEISALMQLLVRVIGRETKKLHDNNIRLNVIGNIARLPEKVRAVLQNTMELTKN 155
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N L L IA +YS + +I +A +++F +I++G++ +D L++ YL T+ +PDP+L+I
Sbjct: 156 NNKLVLNIALSYSGKWDIVQACRSMFFEIQAGNIDPDAIDEQLLSSYLSTASMPDPELLI 215
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE R+S+F+LWQ AYSE F YWPDF R + A+ +Y R+RRFG S++
Sbjct: 216 RTSGEFRISNFMLWQNAYSEIYFTNAYWPDFRRSQLYDAILEYQNRERRFGQTSEQ 271
>gi|282882076|ref|ZP_06290717.1| di-trans,poly-cis-decaprenylcistransferase [Peptoniphilus
lacrimalis 315-B]
gi|281298106|gb|EFA90561.1| di-trans,poly-cis-decaprenylcistransferase [Peptoniphilus
lacrimalis 315-B]
Length = 241
Score = 211 bits (536), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 99/229 (43%), Positives = 150/229 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA ++ LPR GH+ G + +IV A+ E+G+K+L+++AFS NW+R
Sbjct: 13 PKHIGIIMDGNGRWAKSKNLPRSFGHKAGSDRVIDIVEASYELGVKSLSLYAFSTENWKR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EIS+L++LIK +++ + KNN+++ V G+ L + + + A ++T+ N +
Sbjct: 73 PRDEISKLMELIKYYIRTQLAKINKNNVRINVFGDIEPLPESVKKEILMAVEKTKNNDKM 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL I NY +DEI RA KNI +D+ G + + D++ + YL + DL+IR G
Sbjct: 133 NLNICLNYGGQDEILRACKNISKDVFDGKITTEDINKEIFDSYLYSKGQDSLDLLIRPSG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+F+LWQ+AY+EF F WPDF++E + A+ Y RDRR+GGL
Sbjct: 193 ELRVSNFMLWQLAYAEFYFSNILWPDFTKEELYKAIYSYQNRDRRYGGL 241
>gi|289550949|ref|YP_003471853.1| Undecaprenyl pyrophosphate synthetase [Staphylococcus lugdunensis
HKU09-01]
gi|289180481|gb|ADC87726.1| Undecaprenyl pyrophosphate synthetase [Staphylococcus lugdunensis
HKU09-01]
Length = 253
Score = 211 bits (536), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 96/229 (41%), Positives = 145/229 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA R +PR GH +G++ +I A +GIK LT++AFS NW R
Sbjct: 25 PEHVAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITREANNLGIKYLTLYAFSTENWSR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE++ ++ L +FLK L + N+KV IG L + + + EA+ +T NTGL
Sbjct: 85 PESEVNYIMSLPVNFLKTFLPELIEKNVKVETIGFMEGLPESTIKAINEAKIKTEHNTGL 144
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY R EI ++K I++++++ + ++ ++I+ +L T P+P+L+IRT G
Sbjct: 145 RLIFAINYGGRAEIVHSVKAIYKELQAQGLDEESINENMISSHLMTKSYPEPELLIRTSG 204
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+R+S+FL+WQV+YSEF+F + WPDF + + Y R RRFGGL
Sbjct: 205 EQRISNFLIWQVSYSEFIFNEKLWPDFDEQELKSCIKIYQSRQRRFGGL 253
>gi|160885544|ref|ZP_02066547.1| hypothetical protein BACOVA_03544 [Bacteroides ovatus ATCC 8483]
gi|299147396|ref|ZP_07040461.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides sp. 3_1_23]
gi|156109166|gb|EDO10911.1| hypothetical protein BACOVA_03544 [Bacteroides ovatus ATCC 8483]
gi|298514674|gb|EFI38558.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides sp. 3_1_23]
Length = 244
Score = 211 bits (536), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 102/232 (43%), Positives = 145/232 (62%), Gaps = 2/232 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG R GHR G E I AA +GIK LT++ FS NW R
Sbjct: 13 PQHVAIIMDGNGRWAKQRGEERTYGHRAGAETVQNITEDAARLGIKYLTLYTFSTENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EI+ L+ L+ +++ +L KNNI+ VIG+ L ++ L ++T N+G+
Sbjct: 73 PQDEIAALMNLLLESIEEE--TLMKNNIRFNVIGDFKKLPVEVQKSLASCIERTSKNSGM 130
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ +A +YSSR EI+ A++ I I++G + + I+ +LDT +PDPDL+IRTGG
Sbjct: 131 YMVLALSYSSRWEITEAVRQIATLIKAGEMSPEQITDECISSHLDTKFMPDPDLLIRTGG 190
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E RLS++LLWQ AYSE F +WPDF +E + A+ +Y R+RRFG S++
Sbjct: 191 EIRLSNYLLWQCAYSELYFCDTFWPDFDKEELYKAIWEYQQRERRFGKTSEQ 242
>gi|147677592|ref|YP_001211807.1| undecaprenyl pyrophosphate synthase [Pelotomaculum
thermopropionicum SI]
gi|146273689|dbj|BAF59438.1| undecaprenyl pyrophosphate synthase [Pelotomaculum
thermopropionicum SI]
Length = 266
Score = 211 bits (536), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 105/242 (43%), Positives = 147/242 (60%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + S P HI IIMDGNGRWA RG PR GHR G+E +IV A +E+ I LT+
Sbjct: 25 LLKKLDRSRLPKHIAIIMDGNGRWAQRRGFPRAYGHRAGVESLRDIVKACSELQIPILTV 84
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E+ L+ L+ +L K L ++ +++ IG L LK A
Sbjct: 85 YAFSTENWKRPQEEVDILMDLLVEYLNKEIDELCRSGVRINPIGRLGDLPRQAQDALKMA 144
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
D +R N GL L +A NY R EI A+++I D+E G + ++D +I++ L T+ P
Sbjct: 145 TDCSRNNKGLILNLALNYGGRTEIVDAVRSIAADVEKGLLRPGEIDDKVISERLYTAGQP 204
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IR G+ R+S+FLLWQ+AY+EF P WPDF R A++ + R+RRFGGL
Sbjct: 205 DPDLLIRPAGDFRISNFLLWQLAYTEFWLTPVMWPDFRRVHLLRAIDDFQRRERRFGGLI 264
Query: 241 KK 242
KK
Sbjct: 265 KK 266
>gi|293371698|ref|ZP_06618109.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides ovatus SD
CMC 3f]
gi|292633395|gb|EFF51965.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides ovatus SD
CMC 3f]
Length = 244
Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 102/232 (43%), Positives = 145/232 (62%), Gaps = 2/232 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG R GHR G E +I AA +GIK LT++ FS NW R
Sbjct: 13 PQHVAIIMDGNGRWAKQRGEERTYGHRAGAETVQKITEDAARLGIKYLTLYTFSTENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EI+ L+ L+ +++ +L KNNI+ VIG+ L ++ L +T N+G+
Sbjct: 73 PQDEIAALMNLLLESIEEE--TLMKNNIRFNVIGDFKKLPVEVQKSLTSCIKRTSKNSGM 130
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ +A +YSSR EI+ A++ I I++G + + I+ +LDT +PDPDL+IRTGG
Sbjct: 131 YMVLALSYSSRWEITEAVRQIATLIKAGEMSPEQITDECISSHLDTKFMPDPDLLIRTGG 190
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E RLS++LLWQ AYSE F +WPDF +E + A+ +Y R+RRFG S++
Sbjct: 191 EIRLSNYLLWQCAYSELYFCDTFWPDFDKEELYKAIWEYQQRERRFGKTSEQ 242
>gi|304436533|ref|ZP_07396506.1| di-trans,poly-cis-decaprenylcistransferase [Selenomonas sp. oral
taxon 149 str. 67H29BP]
gi|304370476|gb|EFM24128.1| di-trans,poly-cis-decaprenylcistransferase [Selenomonas sp. oral
taxon 149 str. 67H29BP]
Length = 264
Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 99/235 (42%), Positives = 144/235 (61%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+S P H+ I+MDGNGRWA +G R AGH G IV AA+ +GI+ LT++AFS N
Sbjct: 29 ASLPRHVAIVMDGNGRWAEGKGKSRSAGHEAGARTLKRIVRAASHIGIEVLTVYAFSTEN 88
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W+RP E+ L+ L SFL+K + + N+++ IG R D L +++AE +T N
Sbjct: 89 WKRPHREVDFLLNLFDSFLEKEITEMHEQNVRMSFIGRRDRFSDRFLARMEDAEQRTAHN 148
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
TG++ +A NY S+DEI RA++ + + G + ++D +L + LDT+ P DL IR
Sbjct: 149 TGVHFNLAANYGSQDEIVRAVRKLATRVAEGELRPEEIDEALFSNALDTAGDPPVDLFIR 208
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
T G+ RLS+FLLWQ AY+E F +WPDF+ E A+ + R RRFGGL+ +
Sbjct: 209 TSGDLRLSNFLLWQSAYAELYFTETHWPDFTPEELKRAIEDFAGRSRRFGGLTTE 263
>gi|89098607|ref|ZP_01171489.1| UppS [Bacillus sp. NRRL B-14911]
gi|89086569|gb|EAR65688.1| UppS [Bacillus sp. NRRL B-14911]
Length = 258
Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/229 (44%), Positives = 143/229 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R LPR AGH +G++V A E+GIK LT++AFS NW+R
Sbjct: 30 PSHVAIIMDGNGRWAKKRALPRIAGHHEGMKVVRRTTKLANELGIKTLTLYAFSTENWKR 89
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL + FL L + N++V++IG + L L +++A ++T+ N GL
Sbjct: 90 PKLEVDYLMKLPEEFLGTFLPELVEENVRVQMIGYKDKLPGHTLRAIEKAMEETKDNDGL 149
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY SR EI A+K + D +SG + +++ + + YL T + DPDL+IRT G
Sbjct: 150 ILNFALNYGSRAEILEAVKRVLNDCQSGIMEESELNEEVFSAYLMTEGLEDPDLLIRTSG 209
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+F+LWQ+AY+EF F WPDF+ A+ + R RRFGG+
Sbjct: 210 EIRLSNFMLWQLAYTEFWFTDVLWPDFTEGELLEAIEVFQNRQRRFGGV 258
>gi|219669722|ref|YP_002460157.1| undecaprenyl diphosphate synthase [Desulfitobacterium hafniense
DCB-2]
gi|219539982|gb|ACL21721.1| undecaprenyl diphosphate synthase [Desulfitobacterium hafniense
DCB-2]
Length = 256
Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 148/232 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA RGLPR GH+ G+E +IV A + +GI+ LT++AFS NW R
Sbjct: 25 PRHIAIIMDGNGRWAQKRGLPRTVGHKAGVEALRDIVKACSNLGIEALTVYAFSTENWSR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L+ +L++ L N ++V++IGN L + LK + +T N GL
Sbjct: 85 PKEEVNILMNLLIDYLRRELDELHDNKVRVQMIGNMEQLPLEAQRELKRSIKKTVNNGGL 144
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY R EI+ A++ + + + + ++ LI+++L TS + DPDL+IRT G
Sbjct: 145 ILNLALNYGGRAEITCAVRQLCEKVLKKELTPEEITGELISQHLFTSGLSDPDLLIRTSG 204
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AY+E + WPDFS + AL ++ R+RRFGGL+K+
Sbjct: 205 ELRVSNFLLWQIAYTEIIVTECLWPDFSPDQLVEALLEFQKRERRFGGLNKR 256
>gi|199597106|ref|ZP_03210538.1| Undecaprenyl pyrophosphate synthase [Lactobacillus rhamnosus HN001]
gi|258508616|ref|YP_003171367.1| undecaprenyl pyrophosphate synthetase [Lactobacillus rhamnosus GG]
gi|199591910|gb|EDY99984.1| Undecaprenyl pyrophosphate synthase [Lactobacillus rhamnosus HN001]
gi|257148543|emb|CAR87516.1| Undecaprenyl pyrophosphate synthetase [Lactobacillus rhamnosus GG]
gi|259649923|dbj|BAI42085.1| undecaprenyl pyrophosphate synthase [Lactobacillus rhamnosus GG]
Length = 250
Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 106/234 (45%), Positives = 141/234 (60%), Gaps = 3/234 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH++G++ I AA+ +G+K LT++AFS NW+R
Sbjct: 17 PAHIAIIMDGNGRWAKRRLLPRVAGHKQGMQNVKTITKAASRLGVKVLTLYAFSTENWKR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE++ L++L F L K N+KV V+G L + ++A T NTG+
Sbjct: 77 PGSEVNYLMRLPVDFFNDFMPDLIKENVKVEVMGELTDLPEPTRKASEKAMADTANNTGM 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT---SDVPDPDLIIR 187
L A NY RDE+ A + + + G + D+D + L T D+ DPDL+IR
Sbjct: 137 ILNFALNYGGRDELVHAARKLASAVRDGQLDPEDIDDQHFSAALMTGFLGDLADPDLLIR 196
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
T GE R+S+FLLWQ+AYSE VF+ +YWPDFS A+ Y RDRRFGGL K
Sbjct: 197 TSGELRISNFLLWQIAYSELVFVDDYWPDFSPAALEAAIATYQARDRRFGGLKK 250
>gi|188996579|ref|YP_001930830.1| undecaprenyl diphosphate synthase [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188931646|gb|ACD66276.1| undecaprenyl diphosphate synthase [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 231
Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 100/227 (44%), Positives = 141/227 (62%), Gaps = 6/227 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
PDH+ IIMDGNGRWA RGL R GHR+G++ + A +VGIK +T+FAFS NW+R
Sbjct: 9 PDHVAIIMDGNGRWAKMRGLDRVYGHREGVKTVERTIKFAKKVGIKYITLFAFSTENWQR 68
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P+ E++ +++L ++ + LK+N+IK+ +G + L D +L +K+AED+T+ + L
Sbjct: 69 PIEEVNAIMQLFVEYIHEKLPFLKENDIKLLFMGRKEGLWDSVLEAMKKAEDETKNCSSL 128
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ I NYS + EI A+ I + +D YL ++PDPDL+IRT G
Sbjct: 129 TVIIGLNYSGKAEIVDAVNKILKS------NVEKIDEESFRNYLYLPEIPDPDLLIRTSG 182
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
EKR+S+FLLWQ+AY+E F WPDF E F AL Y RDRRFG
Sbjct: 183 EKRISNFLLWQLAYTELYFTDVLWPDFDEEEFLKALYDYQSRDRRFG 229
>gi|332637696|ref|ZP_08416559.1| undecaprenyl pyrophosphate synthase [Weissella cibaria KACC 11862]
Length = 262
Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/234 (43%), Positives = 149/234 (63%), Gaps = 3/234 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ +IMDGNGRWA + LPR AGH++G+EV +I AA+++G+K LT++AFS NW+R
Sbjct: 23 PNHVAVIMDGNGRWAKRQNLPRVAGHQRGMEVVKDITKAASDLGVKVLTLYAFSTENWKR 82
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L+KL F L + N++V V+G L D + +A QT NTG+
Sbjct: 83 PETEVGFLMKLPGKFFDTFVPELIEKNVRVNVMGYIDQLPADTQRAVNDAIAQTANNTGM 142
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS---DVPDPDLIIR 187
L A NY R EI ++ I + +G + +++ + I L T+ + DPD++IR
Sbjct: 143 VLNFALNYGGRAEIVTGVQQIAAQVAAGELQPEEINDATIDAALMTAPLGEFADPDVLIR 202
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
T GE RLS+FLLWQ+AY+EFVFI E+WP+ + +F AL Y RDRRFGG+++
Sbjct: 203 TSGEMRLSNFLLWQLAYAEFVFIDEHWPEVTPAVFEKALAMYQARDRRFGGIAE 256
>gi|167762049|ref|ZP_02434176.1| hypothetical protein BACSTE_00397 [Bacteroides stercoris ATCC
43183]
gi|167700141|gb|EDS16720.1| hypothetical protein BACSTE_00397 [Bacteroides stercoris ATCC
43183]
Length = 244
Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 102/232 (43%), Positives = 147/232 (63%), Gaps = 2/232 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG R GH+ G E + I A+++GIK LT++ FS NW R
Sbjct: 13 PQHVAIIMDGNGRWAKLRGQERSYGHQAGAETVHVIAEEASKLGIKYLTLYTFSTENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E++ L+ L+ +++ + KNNI RVIG+ L D++ L+ T NTG+
Sbjct: 73 PSNEVAALMALLFDSIEEE--TFMKNNISFRVIGDLTKLPDNVRERLETCIAHTANNTGM 130
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L +A +YSSR EI+ A + + ++ G + +DS+L+++YL T +PDPDL+IRTGG
Sbjct: 131 SLVLAISYSSRWEITEAARRLAVLVQKGELTPEQIDSTLLSQYLATDFMPDPDLLIRTGG 190
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E RLS++LLWQ AYSE F YWPDF A++ Y R+RRFG S++
Sbjct: 191 EIRLSNYLLWQCAYSELYFCDTYWPDFREAELHKAIHDYQKRERRFGKTSEQ 242
>gi|94310381|ref|YP_583591.1| undecaprenyl pyrophosphate synthetase [Cupriavidus metallidurans
CH34]
gi|93354233|gb|ABF08322.1| undecaprenyl pyrophosphate synthase [Cupriavidus metallidurans
CH34]
Length = 256
Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 102/232 (43%), Positives = 145/232 (62%), Gaps = 2/232 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R LPR AGH +G++ EIV A A G++ LT+FAFS NWRR
Sbjct: 17 PRHVAIIMDGNGRWATQRHLPRVAGHNRGLDAVREIVQACAARGVQYLTLFAFSSENWRR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L + L++ + NNI++RV+G+ I +K+AE +T NTGL
Sbjct: 77 PADEVSFLMRLFMTALRREVVRMHANNIRLRVVGDLSRFSPRIQQAIKDAEARTEGNTGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ IA NY R ++ +A++ + S + S +D S++A +L + P+PDL IRTGG
Sbjct: 137 TVTIAANYGGRWDLLQAMRKML--ARSPLLDSDAIDESVLAPHLAMAYAPEPDLFIRTGG 194
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FLLWQ+AY+E F +WPDF A Y R+RRFG S +
Sbjct: 195 EQRISNFLLWQLAYTELYFTETFWPDFDAAELDKAFASYRQRERRFGRTSAQ 246
>gi|229552425|ref|ZP_04441150.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus rhamnosus
LMS2-1]
gi|258539795|ref|YP_003174294.1| undecaprenyl pyrophosphate synthetase [Lactobacillus rhamnosus Lc
705]
gi|229314162|gb|EEN80135.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus rhamnosus
LMS2-1]
gi|257151471|emb|CAR90443.1| Undecaprenyl pyrophosphate synthetase [Lactobacillus rhamnosus Lc
705]
Length = 250
Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 106/234 (45%), Positives = 141/234 (60%), Gaps = 3/234 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH++G++ I AA+ +G+K LT++AFS NW+R
Sbjct: 17 PAHIAIIMDGNGRWAKRRLLPRVAGHKQGMQNVKTITKAASRLGVKVLTLYAFSTENWKR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE++ L++L F L K N+KV V+G L + ++A T NTG+
Sbjct: 77 PGSEVNYLMRLPVDFFNDFMPDLIKENVKVEVMGELTDLPEPTRKASEKAMADTANNTGM 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT---SDVPDPDLIIR 187
L A NY RDE+ A + + + G + D+D + L T D+ DPDL+IR
Sbjct: 137 ILNFALNYGGRDELVHAARKLASAVRDGQLDPEDIDDQRFSDALMTGFLGDLADPDLLIR 196
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
T GE R+S+FLLWQ+AYSE VF+ +YWPDFS A+ Y RDRRFGGL K
Sbjct: 197 TSGELRISNFLLWQIAYSELVFVDDYWPDFSPAALEAAIATYQARDRRFGGLKK 250
>gi|255692418|ref|ZP_05416093.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides finegoldii
DSM 17565]
gi|260621886|gb|EEX44757.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides finegoldii
DSM 17565]
Length = 244
Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 102/232 (43%), Positives = 143/232 (61%), Gaps = 2/232 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG R GH G E I AA +GIK LT++ FS NW R
Sbjct: 13 PQHVAIIMDGNGRWAKQRGKERTYGHHAGAETVQRITEDAARLGIKYLTLYTFSTENWSR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L+ +K+ +L KNN++ VIG+ L ++ L D + NTG+
Sbjct: 73 PQEEVTALMNLLLDSIKEE--TLMKNNLRFNVIGDLKKLPVEVQDSLTSCIDHSAKNTGM 130
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +YSSR EI+ A++ I I+ G + + IA +L+T+ +PDPDL+IRTGG
Sbjct: 131 CLVLALSYSSRWEITEAVRQIATKIKEGDLSPEQITDECIASHLNTNFMPDPDLLIRTGG 190
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E RLS++LLWQ AYSE F +WPDF +E + A+ +Y R+RRFG S++
Sbjct: 191 EIRLSNYLLWQCAYSELYFCDIFWPDFDKEELYKAVCEYQQRERRFGKTSEQ 242
>gi|89895288|ref|YP_518775.1| hypothetical protein DSY2542 [Desulfitobacterium hafniense Y51]
gi|89334736|dbj|BAE84331.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 256
Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 148/232 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA RGLPR GH+ G+E +IV A + +GI+ LT++AFS NW R
Sbjct: 25 PRHIAIIMDGNGRWAQKRGLPRTVGHKAGVEALRDIVKACSNLGIEALTVYAFSTENWSR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L+ +L++ L N ++V++IGN L + LK + +T N GL
Sbjct: 85 PKEEVNILMNLLIDYLRRELDELHDNKVRVQMIGNMEQLPLEAQRELKRSIKKTVNNGGL 144
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY R EI+ A++ + + + + ++ LI+++L TS + DPDL+IRT G
Sbjct: 145 ILNLALNYGGRAEITCAVRQLCEKVLKKELTPEEITGELISQHLFTSGLSDPDLLIRTSG 204
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AY+E + WPDFS + AL ++ R+RRFGGL+K+
Sbjct: 205 ELRVSNFLLWQIAYTEIIVTECLWPDFSPDQLVEALLEFQKRERRFGGLNKR 256
>gi|116492647|ref|YP_804382.1| undecaprenyl pyrophosphate synthetase [Pediococcus pentosaceus ATCC
25745]
gi|116102797|gb|ABJ67940.1| Undecaprenyl pyrophosphate synthetase [Pediococcus pentosaceus ATCC
25745]
Length = 249
Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/239 (41%), Positives = 152/239 (63%), Gaps = 3/239 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
++ + P H+ IIMDGNGRWA R +PR AGH++G+EV I +A+++G+K LT++AFS
Sbjct: 11 LNENIPKHVAIIMDGNGRWAQKRFMPRVAGHKRGMEVVKTITKSASKLGVKVLTLYAFST 70
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP E+S L+KL +F K L + ++VRV G+ L +++A + T
Sbjct: 71 ENWKRPQDEVSFLMKLPITFFNKFVPELIEEGVQVRVTGDIDGLPQATQDAVRKAIEDTA 130
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS---DVPDP 182
T + L A NY SRDEI++ +++I Q + + + +D +I +L T+ ++ +P
Sbjct: 131 QGTKMILNFALNYGSRDEITKMVQSIAQAVNTKQLDVDKIDEQVIENHLQTNFLGELSNP 190
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
D++IRT GE+R+S+FLLWQ+AYSE VF WPDF ++F + +Y RDRRFG + K
Sbjct: 191 DVLIRTSGEERISNFLLWQIAYSELVFTDTLWPDFDEKIFIEMIKEYQKRDRRFGAIKK 249
>gi|310779560|ref|YP_003967893.1| Undecaprenyl pyrophosphate synthetase [Ilyobacter polytropus DSM
2926]
gi|309748883|gb|ADO83545.1| Undecaprenyl pyrophosphate synthetase [Ilyobacter polytropus DSM
2926]
Length = 234
Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/229 (44%), Positives = 140/229 (61%), Gaps = 7/229 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA RGLPR GHR G + +I+ A E+G+K LT++AFS NW+R
Sbjct: 9 PKHIAIIMDGNGRWAKKRGLPRTMGHRAGAKTLKKILTHAGELGVKYLTVYAFSTENWKR 68
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L+KL K +LK ++ KN +++ V G + ++ +++ +++ E T N +
Sbjct: 69 PQNEVDTLMKLFKEYLKNEKKTMMKNGVRLMVSGKKEGVNKELIEEIEKTEKLTEGNDKI 128
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IAFNY R EI A+ I +D +V +KY+ D+PDP+L+IRT G
Sbjct: 129 TLNIAFNYGGRSEIVDAVNKILKD------GVTEVTEESFSKYM-YRDIPDPELLIRTSG 181
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+FLLWQ+AY+E WPDF ALN Y RDRRFGGL
Sbjct: 182 EIRISNFLLWQIAYTELYITELTWPDFDESELEKALNTYMKRDRRFGGL 230
>gi|302383604|ref|YP_003819427.1| undecaprenyl diphosphate synthase [Brevundimonas subvibrioides ATCC
15264]
gi|302194232|gb|ADL01804.1| undecaprenyl diphosphate synthase [Brevundimonas subvibrioides ATCC
15264]
Length = 251
Score = 210 bits (534), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 97/230 (42%), Positives = 140/230 (60%), Gaps = 1/230 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA ARGLPR GHR+G++ V AA + GI LT+F FS NWRR
Sbjct: 15 PRHVALIMDGNGRWAQARGLPRAMGHREGVQALKRTVQAAPDFGIDCLTVFGFSTENWRR 74
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
PV E+S+L+ L++S++ L + ++VRV+G R L DI +++ AE T N
Sbjct: 75 PVEEVSDLMGLVRSYVSSDLNRLAREGVRVRVLGRRTGLPSDIDAIVERAERTTAHNDKF 134
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +AFNY R +I A + + +G + +D +++ L T+ P D+I+RT G
Sbjct: 135 LLQVAFNYGGRADIVDAAQAHVDRVLAGQ-ATGPLDEAMLGAGLSTAGSPPVDVIVRTSG 193
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E+RLS+FLLW+ AY+E V+ WPD+ E + QY RDRRFG ++
Sbjct: 194 EQRLSNFLLWEAAYAELVYQDVLWPDYGPEALADVVRQYQARDRRFGAVT 243
>gi|323339425|ref|ZP_08079707.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus ruminis
ATCC 25644]
gi|323093136|gb|EFZ35726.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus ruminis
ATCC 25644]
Length = 262
Score = 210 bits (534), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 104/235 (44%), Positives = 150/235 (63%), Gaps = 3/235 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R LPR AGH++G+E EI AA+ +G+K LT++AFS NW+R
Sbjct: 25 PNHIAIIMDGNGRWAQKRRLPRVAGHKQGMENVKEITKAASNLGVKVLTLYAFSTENWKR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE+S L+ L F L +NN+KV V+G L + + +A +QT+ TG+
Sbjct: 85 PKSEVSFLMDLPSKFFDTFVPELIENNVKVNVMGYTDQLPEKTQKAVFDAIEQTKNCTGM 144
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV---PDPDLIIR 187
L A NY R EI +K I + +++ + + ++D I K L T+ V DPDL+IR
Sbjct: 145 ILNFALNYGGRAEIVTGVKKIAEKVQNNELAADEIDEETIRKSLMTASVYPYDDPDLLIR 204
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
T GE+R+S+FLLWQ+AYSE VF +WPD+S ++++ R+RRFGGL+++
Sbjct: 205 TSGEERISNFLLWQLAYSEMVFTDTFWPDYSPADLAEDISKFQQRNRRFGGLNEE 259
>gi|295676821|ref|YP_003605345.1| undecaprenyl diphosphate synthase [Burkholderia sp. CCGE1002]
gi|295436664|gb|ADG15834.1| undecaprenyl diphosphate synthase [Burkholderia sp. CCGE1002]
Length = 260
Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 106/233 (45%), Positives = 144/233 (61%), Gaps = 3/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH +G++ V A A G++ LT+FAFS NWRR
Sbjct: 17 PRHIAIIMDGNGRWATQRRLPRVAGHTRGVDAVRAAVEACARRGVEYLTLFAFSSENWRR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L + L++ L N I++RV+G+ DD I ++K AE +T NT L
Sbjct: 77 PNEEVSFLMRLFVTALEREIGKLHANGIRLRVVGDLERFDDKIRDLIKRAETKTARNTRL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L IA NY R +I +A + + Q +G DV A++L + P+PDL IRTG
Sbjct: 137 TLTIAANYGGRWDIMQATRKLVAQAAAAGQPV--DVSEDSFAEHLSMAYAPEPDLFIRTG 194
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+R+S+FLLWQ+AY+EF F +WPDF + HA+ Y R+RRFG S +
Sbjct: 195 GERRVSNFLLWQLAYTEFYFTDTFWPDFDADALGHAIASYAERERRFGRTSAQ 247
>gi|315658451|ref|ZP_07911323.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
lugdunensis M23590]
gi|315496780|gb|EFU85103.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
lugdunensis M23590]
Length = 282
Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 96/229 (41%), Positives = 145/229 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA R +PR GH +G++ +I A +GIK LT++AFS NW R
Sbjct: 54 PEHVAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITREANNLGIKYLTLYAFSTENWSR 113
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE++ ++ L +FLK L + N+KV IG L + + + EA+ +T NTGL
Sbjct: 114 PESEVNYIMSLPVNFLKTFLPELIEKNVKVETIGFMEGLPESTIKAINEAKIKTEHNTGL 173
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY R EI ++K I++++++ + ++ ++I+ +L T P+P+L+IRT G
Sbjct: 174 RLIFAINYGGRAEIVHSVKAIYKELQAQGLDEESINENMISSHLMTKSYPEPELLIRTSG 233
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+R+S+FL+WQV+YSEF+F + WPDF + + Y R RRFGGL
Sbjct: 234 EQRISNFLIWQVSYSEFIFNEKLWPDFDEQELKSCIKIYQSRQRRFGGL 282
>gi|300813706|ref|ZP_07094026.1| di-trans,poly-cis-decaprenylcistransferase [Peptoniphilus sp. oral
taxon 836 str. F0141]
gi|300512163|gb|EFK39343.1| di-trans,poly-cis-decaprenylcistransferase [Peptoniphilus sp. oral
taxon 836 str. F0141]
Length = 241
Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/229 (42%), Positives = 150/229 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA ++ LPR GH+ G + +IV A+ E+G+K+L+++AFS NW+R
Sbjct: 13 PKHIGIIMDGNGRWAKSKNLPRSFGHKAGSDRVIDIVEASYELGVKSLSLYAFSTENWKR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EIS+L++LIK +++ + KNN+++ V G+ L + + + A ++T+ N +
Sbjct: 73 PRDEISKLMELIKYYIRTQLAKINKNNVRINVFGDIEPLPESVKNEILVAVEKTKTNDKM 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL I NY +DEI RA KNI +D+ G + + D++ + +L + DL+IR G
Sbjct: 133 NLNICLNYGGQDEILRACKNISKDVLDGKITTEDINKEIFDSHLYSKGQDSLDLLIRPSG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+F+LWQ+AY+EF F WPDF++E + A+ Y RDRR+GGL
Sbjct: 193 ELRVSNFMLWQLAYAEFYFSNILWPDFTKEELYKAIYSYQNRDRRYGGL 241
>gi|312885973|ref|ZP_07745601.1| undecaprenyl diphosphate synthase [Mucilaginibacter paludis DSM
18603]
gi|311301510|gb|EFQ78551.1| undecaprenyl diphosphate synthase [Mucilaginibacter paludis DSM
18603]
Length = 246
Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 147/232 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA +G R GH G+ ++V A E+GIK LT++ FS NW R
Sbjct: 13 PQHIAVIMDGNGRWAKGKGKLRVFGHHNGVLSVRDVVEGAGELGIKYLTLYTFSSENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ +++L+ S + K L NN+++ IG+ L L A QT NTGL
Sbjct: 73 PKFEVTAIMELLISTINKEIRKLMDNNVRLNTIGDMDMLPAKCSAELNNAITQTAGNTGL 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +YSSR EI +A + I + +ESG + + D+ + +++L TS++PDP+L+IRT G
Sbjct: 133 VLTLALSYSSRREIVQATQAIARKVESGELKAADITEEVFSQHLHTSNLPDPELLIRTSG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S++LLWQ+AY+E F + WPDF RE F A+ Y R+RRFG +S++
Sbjct: 193 EYRISNYLLWQIAYAELYFTDKLWPDFRREDLFEAILDYQKRERRFGMISEQ 244
>gi|257464023|ref|ZP_05628408.1| undecaprenyl pyrophosphate synthetase [Fusobacterium sp. D12]
gi|317061544|ref|ZP_07926029.1| undecaprenyl pyrophosphate synthetase [Fusobacterium sp. D12]
gi|313687220|gb|EFS24055.1| undecaprenyl pyrophosphate synthetase [Fusobacterium sp. D12]
Length = 230
Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/237 (44%), Positives = 143/237 (60%), Gaps = 7/237 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
MS P HI IIMDGNGRWA RGLPR GHR+G +I+ A E+GI+ LT++AFS
Sbjct: 1 MSIEVPKHIAIIMDGNGRWAKKRGLPRTLGHREGARTLQKILKYAGEIGIQYLTVYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW R E+S L+KL ++KK +L KNN++ V G + + D +L +K E++T
Sbjct: 61 ENWSRSEEEVSALMKLFSKYMKKEEKNLIKNNVRFLVSGRKDRVSDSLLREIKALEEKTS 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
NTG+ IAFNY R EI A+ + Q+ + S+ D+ S L ++PDP+LI
Sbjct: 121 QNTGITFHIAFNYGGRAEIVDAVNRLLQE-KKESISEEDISSHLY------QNLPDPELI 173
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRT GE R+S+FLLWQ+AY+E WPDF AL + R+RRFGG+ +K
Sbjct: 174 IRTSGEFRISNFLLWQLAYAEIYVTDTLWPDFEERDLELALENFQKRERRFGGVYEK 230
>gi|261253724|ref|ZP_05946297.1| undecaprenyl pyrophosphate synthetase [Vibrio orientalis CIP
102891]
gi|260937115|gb|EEX93104.1| undecaprenyl pyrophosphate synthetase [Vibrio orientalis CIP
102891]
Length = 251
Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 145/227 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA A+G PR GH+ G+ + ++ +A++GIK +T+FAFS NWRR
Sbjct: 12 PKHIAIIMDGNGRWAKAQGKPRVFGHKNGVAAVRKAISTSAKLGIKAITLFAFSSENWRR 71
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L S L L KNN+++RVIG++ +D + + +AE T NTG+
Sbjct: 72 PEEEVGVLMELFISVLSTEVKKLHKNNLRLRVIGDKSRFNDRLQKKIAQAEALTESNTGM 131
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ IA NY + +I +A K I + +G + + DV LI ++L +D+P+ DL+IRT G
Sbjct: 132 VINIAANYGGKWDIMQATKAISAKVANGELKAEDVSEELITEHLTMADLPEVDLMIRTSG 191
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+F+LWQ+AY+E F P YWP+F A+ + R+RRFG
Sbjct: 192 ECRISNFMLWQMAYAELYFTPVYWPEFDENSLIEAVTWFVNRERRFG 238
>gi|209518712|ref|ZP_03267528.1| undecaprenyl diphosphate synthase [Burkholderia sp. H160]
gi|209500826|gb|EEA00866.1| undecaprenyl diphosphate synthase [Burkholderia sp. H160]
Length = 260
Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 106/233 (45%), Positives = 145/233 (62%), Gaps = 3/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH +G++ V A A G++ LT+FAFS NWRR
Sbjct: 17 PRHIAIIMDGNGRWATQRRLPRVAGHTRGVDAVRAAVEACARRGVEYLTLFAFSSENWRR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L + L++ L N I++RV+G+ DD I ++K AE +T NT L
Sbjct: 77 PNEEVSFLMRLFVTALEREIGKLHANGIRLRVVGDLERFDDKIRDLIKRAETKTARNTRL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L IA NY R +I +A + + Q +G + DS A++L + P+PDL IRTG
Sbjct: 137 TLTIAANYGGRWDIMQATRKLVEQSAAAGKPVEVNEDS--FAEHLSMAYAPEPDLFIRTG 194
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+R+S+FLLWQ+AY+EF F +WPDF + HA+ Y R+RRFG S +
Sbjct: 195 GERRVSNFLLWQLAYTEFYFTDTFWPDFDADALGHAIASYAERERRFGRTSAQ 247
>gi|304320070|ref|YP_003853713.1| hypothetical protein PB2503_02477 [Parvularcula bermudensis
HTCC2503]
gi|303298973|gb|ADM08572.1| hypothetical protein PB2503_02477 [Parvularcula bermudensis
HTCC2503]
Length = 256
Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 103/234 (44%), Positives = 151/234 (64%), Gaps = 5/234 (2%)
Query: 1 MVASMMSSSPPD-----HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGI 55
M ASM + + H+ IIMDGNGRWA G+ R GH++G+E V AA ++G+
Sbjct: 13 MAASMPGAGDEEEKSLRHVAIIMDGNGRWAKKHGVSRLRGHQEGMEAARRAVEAAKDLGL 72
Query: 56 KNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILC 115
+LT+++FS NW RP E+ L+ L++ F +K L + I+VR+IG+R +L +DI
Sbjct: 73 SHLTLYSFSTENWNRPEWEVRHLMGLLRQFFEKDLADLVEEGIRVRIIGDRRTLPNDIRE 132
Query: 116 VLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD 175
++++AE QT N G L IAFNY RDE+ RA+ ++ + + SG++ +D +I LD
Sbjct: 133 MVEQAERQTADNKGYTLQIAFNYGGRDELVRAVSSLAEQVASGTLDVEAIDERVIGDTLD 192
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQY 229
T++ PDPDL+IRT GE+RLS+FLLWQ AYSEF+F+ WPDF F A++ Y
Sbjct: 193 TANAPDPDLVIRTSGEQRLSNFLLWQAAYSEFIFMDCLWPDFDEAAFREAVDIY 246
>gi|306821647|ref|ZP_07455245.1| di-trans,poly-cis-decaprenylcistransferase [Eubacterium yurii
subsp. margaretiae ATCC 43715]
gi|304550392|gb|EFM38385.1| di-trans,poly-cis-decaprenylcistransferase [Eubacterium yurii
subsp. margaretiae ATCC 43715]
Length = 238
Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 102/234 (43%), Positives = 147/234 (62%), Gaps = 4/234 (1%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S+ P HI IIMDGNGRWA R +PR GH+ G ++ IV ++G+K LT++AFS
Sbjct: 9 KSNIPTHIAIIMDGNGRWAKKRLMPRSVGHKAGADMLKRIVRKCNDMGVKYLTVYAFSTE 68
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW+RP E+S L+ LI ++L+K + +NN+++ IG+ L LK+A D T+
Sbjct: 69 NWKRPDEEVSLLMGLIVTYLQKEVKEMNENNVRIGAIGDIEKLPKKAYDELKKAMDITKD 128
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTG+ +A NY RD++S AIKN+ ++ ++ +D + +YL TS +PDPDLII
Sbjct: 129 NTGVVFSLALNYGFRDDLSHAIKNMMKE----NIDIEKIDDETVKRYLYTSYMPDPDLII 184
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RTGGE RLS+F+L++ +YSEF F WP+F E A+ Y RDRRFG +
Sbjct: 185 RTGGEIRLSNFMLYEASYSEFYFCDTLWPEFDEEQLCKAIYDYQQRDRRFGNVK 238
>gi|297793407|ref|XP_002864588.1| hypothetical protein ARALYDRAFT_496002 [Arabidopsis lyrata subsp.
lyrata]
gi|297310423|gb|EFH40847.1| hypothetical protein ARALYDRAFT_496002 [Arabidopsis lyrata subsp.
lyrata]
Length = 310
Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/230 (45%), Positives = 143/230 (62%), Gaps = 2/230 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RGL GHR G+E EIV + GI+ LT+FAFS +NW R
Sbjct: 78 PKHVAIIMDGNGRWAKNRGLQPWDGHRAGVEALKEIVKLCGKWGIQVLTVFAFSTDNWIR 137
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EI L L + LK F +L +NN+++ +IG+ L +L V+ E E+ T+ NT L
Sbjct: 138 PRIEIDFLFSLFERSLKSEFQNLAENNVRISIIGDSSKLPKSLLRVINEIEEVTKNNTRL 197
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT--SDVPDPDLIIRT 188
L +A YS + ++ +A + I Q ++ G + ++D LI + L+T ++ P PDL+IRT
Sbjct: 198 QLIVAVGYSGKYDVLQACRGIAQRVKDGEIEVEEIDERLIEEELETNCTEFPYPDLLIRT 257
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GE R+S+FLLWQ+AY+E F E WPDF R F AL + R RRFGG
Sbjct: 258 SGELRVSNFLLWQLAYTELFFAQELWPDFGRSGFIEALTSFQQRQRRFGG 307
>gi|194333245|ref|YP_002015105.1| undecaprenyl diphosphate synthase [Prosthecochloris aestuarii DSM
271]
gi|194311063|gb|ACF45458.1| undecaprenyl diphosphate synthase [Prosthecochloris aestuarii DSM
271]
Length = 272
Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 102/232 (43%), Positives = 144/232 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA G R GH G+E +IV A A++ I LT+F FS NW+R
Sbjct: 34 PRHIAVIMDGNGRWAKENGKSRIEGHIAGVESVRDIVEACAQLQIAYLTLFTFSTENWKR 93
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EIS L++L+ L+K L +NNI++ VIGN L + + L E T NTGL
Sbjct: 94 PEKEISALMQLLIKVLRKEAIKLHENNIRLHVIGNIERLPEKVQQTLNETIALTAKNTGL 153
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA +YS + +I +A + I ++ +G++ ++ LI YL T +PDP+L+IRT G
Sbjct: 154 TLSIALSYSGKWDILQACRKIAEEAAAGALDPKKINEQLIESYLSTRAIPDPELLIRTSG 213
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ AYSE F YWP+F R+ + A+ ++ R+RRFG S++
Sbjct: 214 ELRISNFLLWQSAYSEIFFTRTYWPEFRRKQLYEAIRDFSARERRFGLTSEQ 265
>gi|218665933|ref|YP_002425876.1| undecaprenyl diphosphate synthase [Acidithiobacillus ferrooxidans
ATCC 23270]
gi|218518146|gb|ACK78732.1| undecaprenyl diphosphate synthase [Acidithiobacillus ferrooxidans
ATCC 23270]
Length = 243
Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 107/227 (47%), Positives = 154/227 (67%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA R LPR AGHR+G EV E+V + A++GI LT+FAFS NWRR
Sbjct: 2 PRHIAVIMDGNGRWAYRRHLPRVAGHRRGAEVVREMVQSCADLGIPYLTLFAFSTENWRR 61
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L + L++ L +N +++R+IG+R +LD +I ++ EAE TR N L
Sbjct: 62 PAIEVRLLMNLFRLLLRREARKLHENGVRLRIIGDRSALDPEICQLIDEAEALTRNNQRL 121
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY R +I++A + +++G + D ++ IA++L +D+P+PDL+IRTGG
Sbjct: 122 QLNLAVNYGGRWDIAQAARAAMAAVQAGDLALEDFSAAHIARHLCLADIPEPDLLIRTGG 181
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+R+S+FLLWQ+AY+EF F WPDF+R HAL+ + R RRFG
Sbjct: 182 EERISNFLLWQLAYTEFYFSDTLWPDFNRAALEHALHSFAHRQRRFG 228
>gi|221632995|ref|YP_002522218.1| undecaprenyl diphosphate synthase [Thermomicrobium roseum DSM 5159]
gi|221156565|gb|ACM05692.1| undecaprenyl diphosphate synthase [Thermomicrobium roseum DSM 5159]
Length = 327
Score = 209 bits (532), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 101/229 (44%), Positives = 142/229 (62%), Gaps = 4/229 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RGLPR AGHR G E I AAE+GI+ LT++AFS NWRR
Sbjct: 86 PVHVAIIMDGNGRWATQRGLPRLAGHRAGTENIRPITFKAAELGIRYLTLWAFSTENWRR 145
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++++ +++ L ++ ++R IG+ L + + EA + T+ N +
Sbjct: 146 PRDEVEGLMQILSEVIERETEELHRHGAQLRHIGSLEGLSPSLQRQIHEAIELTKHNDRI 205
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IAFNY R E+ +AI+ I + V +D + + +YL T+ +PDPDLIIRT G
Sbjct: 206 VLTIAFNYGGRAELVQAIRRIVAE----GVPPEMIDEATVERYLYTAGMPDPDLIIRTSG 261
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R S+F LWQ AY+E+ F P WPDF+ + F A+ + R+RRFGGL
Sbjct: 262 ELRTSNFFLWQAAYAEYYFTPTLWPDFTPDEFERAIRDFQRRERRFGGL 310
>gi|167630329|ref|YP_001680828.1| undecaprenyl diphosphate synthase, putative [Heliobacterium
modesticaldum Ice1]
gi|167593069|gb|ABZ84817.1| undecaprenyl diphosphate synthase, putative [Heliobacterium
modesticaldum Ice1]
Length = 260
Score = 209 bits (532), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/230 (43%), Positives = 137/230 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RGLPR AGHR G++ ++ E I+ LT++AFS NW+R
Sbjct: 30 PRHVAIIMDGNGRWAKRRGLPRVAGHRAGVQSLRRVLETCEEFNIRYLTVYAFSTENWKR 89
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L L+ +L++ +L +++R IG L ++ L+ A T N L
Sbjct: 90 PADEVNALFDLLVEYLQRELGTLHDKGVQIRAIGKVSELPENPRKELERAVRHTANNDKL 149
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY R EI A+K I + G + +D +L+ ++L T+DVPDPDL+IR G
Sbjct: 150 ILNVALNYGGRIEIVEAVKAIARQARDGQIDPERIDEALLNRHLYTADVPDPDLLIRPSG 209
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E RLS+FLLWQ AY+E P WPDF R+ AL Y RDRRFGG+
Sbjct: 210 ELRLSNFLLWQSAYTEIWVTPTLWPDFGRKEMVQALVDYQGRDRRFGGVK 259
>gi|312864358|ref|ZP_07724591.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus downei
F0415]
gi|311100079|gb|EFQ58290.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus downei
F0415]
Length = 251
Score = 209 bits (532), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 102/233 (43%), Positives = 142/233 (60%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA R PR GH+ G++ + A+E+G+K LT++AFS NW R
Sbjct: 19 PKHIGIIMDGNGRWAKERLQPRVMGHKAGMDALQRVTIKASELGVKVLTVYAFSTENWSR 78
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ ++ L F K L KNN++V+V+G+ L ++ A +T+ N+GL
Sbjct: 79 PADEVKFIMNLPVEFFDKYVPELHKNNVRVQVMGDTSKLPQATFDAMERACAKTKHNSGL 138
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI+ A++ + Q+++ G + +D LIA L T ++P DPDLII
Sbjct: 139 VLNFALNYGGRAEIAAAVQALAQEVKDGELDPTAIDEDLIADRLMTKNLPYLYRDPDLII 198
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSEF F WPDF+ + A+ ++N R RRFGG+
Sbjct: 199 RTSGELRLSNFLPWQAAYSEFYFTKVLWPDFNEDELVQAIAEFNHRQRRFGGV 251
>gi|108804239|ref|YP_644176.1| undecaprenyl pyrophosphate synthetase [Rubrobacter xylanophilus DSM
9941]
gi|108765482|gb|ABG04364.1| Undecaprenyl pyrophosphate synthetase [Rubrobacter xylanophilus DSM
9941]
Length = 222
Score = 209 bits (532), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/226 (43%), Positives = 138/226 (61%), Gaps = 4/226 (1%)
Query: 14 IGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVS 73
+GIIMDGNGRWA RGLPR AGHR G+ V ++ A E+GI++LT++AFS NW RP
Sbjct: 1 MGIIMDGNGRWARRRGLPRAAGHRAGVSVLTPVLETAGELGIESLTLYAFSTENWSRPAE 60
Query: 74 EISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLF 133
E+ L+ L ++ +K+ +VR +G R L +L ++EAE+ T N L ++
Sbjct: 61 EVDTLMSLFLETARRKLPEIKERGARVRFVGRREHLPKPVLRAMREAEELTAENDRLRVY 120
Query: 134 IAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKR 193
IA NY R EI A + + + + +VD A+YL +VPD DL+IRT GE R
Sbjct: 121 IALNYGGRSEIVDAARRMLAE----GLSPEEVDERTFARYLYAPEVPDLDLLIRTSGEMR 176
Query: 194 LSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+S+FLLWQ+AY+E +WPDFSRE F A+ + R RR+GG+
Sbjct: 177 VSNFLLWQIAYAELYVTETFWPDFSREEFLKAIEDFASRSRRWGGV 222
>gi|117925141|ref|YP_865758.1| undecaprenyl pyrophosphate synthetase [Magnetococcus sp. MC-1]
gi|117608897|gb|ABK44352.1| Undecaprenyl pyrophosphate synthetase [Magnetococcus sp. MC-1]
Length = 243
Score = 209 bits (532), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 96/228 (42%), Positives = 144/228 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I+MDGN RWA R LPR GHR+G++ + A+ + GI+ LT++ FS NW+R
Sbjct: 14 PRHVAIVMDGNRRWARKRYLPRLEGHRQGVKSVRRSIEASLDFGIETLTLYTFSAENWKR 73
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L+ LK+ L + ++ R +G L ++ +++ E++T NT L
Sbjct: 74 PKDEVSALMNLLALHLKREMDDLHERGVRFRALGRLDELPTNVREYVQQLEEKTAGNTRL 133
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
N IA NY R EI A K + + + G + D+ +A +L T D PDPDL+IRTGG
Sbjct: 134 NFNIALNYGGRQEIVDAAKAMSKQVLEGHLKWDDIGPEHLACHLTTHDQPDPDLMIRTGG 193
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+ R+S+FLLWQ+AY+E +F+P YWP+F+R+ F AL++Y R+RRFG
Sbjct: 194 DHRISNFLLWQMAYTELIFLPIYWPEFNRDHFLQALHEYAERERRFGA 241
>gi|306825928|ref|ZP_07459266.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sp. oral
taxon 071 str. 73H25AP]
gi|304431860|gb|EFM34838.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sp. oral
taxon 071 str. 73H25AP]
Length = 252
Score = 209 bits (532), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 107/233 (45%), Positives = 138/233 (59%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HIGIIMDGNGRWA R PR GH+ G+E ++ AA ++G+K +T++AFS NW R
Sbjct: 20 PNHIGIIMDGNGRWAKRRMQPRVFGHKAGMESLQKVTKAANKLGVKVITVYAFSTENWTR 79
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ ++ L F L NN+K+++IG L LK+AE+ T+ NTGL
Sbjct: 80 PDQEVKFIMNLPVEFYDNYVPELHANNVKIQMIGETDRLPKPTFEALKKAEELTKNNTGL 139
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI++A+K I QD+ + D+ LI YL T +P DPDLII
Sbjct: 140 ILNFALNYGGRAEITQAVKLISQDVLDAKINPGDITEELIGNYLFTQHLPKDVRDPDLII 199
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSE F WPDF E A+ YN R RRFGG+
Sbjct: 200 RTSGELRLSNFLPWQGAYSELYFTDTLWPDFDEEALQEAILAYNRRHRRFGGV 252
>gi|193216379|ref|YP_001997578.1| undecaprenyl diphosphate synthase [Chloroherpeton thalassium ATCC
35110]
gi|193089856|gb|ACF15131.1| undecaprenyl diphosphate synthase [Chloroherpeton thalassium ATCC
35110]
Length = 301
Score = 209 bits (532), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 96/237 (40%), Positives = 154/237 (64%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+S + P+HI IIMDGNGRWA ++G R +GH G++ +IV A A++G+K LT++AFS
Sbjct: 40 VSGAIPEHIAIIMDGNGRWAKSQGQVRVSGHHAGLKSVRDIVEACAQLGVKYLTLYAFSK 99
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NWRRP +E++ L++L+ L++ L +NNI++ VIGN L + VL ++ +
Sbjct: 100 ENWRRPKTEVAALMRLLVRALREETQKLHENNIRLNVIGNMQDLPQKVSAVLHDSMALMK 159
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
NT + L +A +YS R EI +A K I ++++ G + ++ + +YL T+ +P+P+L+
Sbjct: 160 QNTKMTLTLALSYSGRWEILQATKRIAEEVKKGFLHPDEITDATFEQYLATAGMPNPELL 219
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRT GE RLS+FLLWQ+AY+E +WPDF R + A+ + R+RR+G S++
Sbjct: 220 IRTSGEFRLSNFLLWQLAYTEIYISNNFWPDFRRNQLYDAIRAFQQRERRYGLTSEQ 276
>gi|160915169|ref|ZP_02077382.1| hypothetical protein EUBDOL_01177 [Eubacterium dolichum DSM 3991]
gi|158432968|gb|EDP11257.1| hypothetical protein EUBDOL_01177 [Eubacterium dolichum DSM 3991]
Length = 236
Score = 209 bits (532), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 105/236 (44%), Positives = 145/236 (61%), Gaps = 1/236 (0%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M P HI IIMDGNGRWA RGLPR AGH++G E +I A ++GI+ LT +AFS
Sbjct: 1 MTDKIMPRHIAIIMDGNGRWAKKRGLPRTAGHKQGAENIRKIAIACNDLGIEALTCYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+ L KL K F + L KNNI+V +G + V++ A ++T
Sbjct: 61 TENWKRPEEEVDYLCKLPKLFFHRYLAELIKNNIRVTFLGEIERFPQETRNVIETAVEKT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
++NTGLNL +A NY + EI A++ +++ G +DV + YL T +P+ DL
Sbjct: 121 KMNTGLNLCLAVNYGGQREIVLAVRKYTREVIDGKR-KNDVTEEEFSSYLMTKGMPEVDL 179
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
+IRT GE+R+S+FLL+Q+AYSE VF WPDF R+ A+ Y R+RRFGGL+
Sbjct: 180 MIRTSGEERISNFLLYQLAYSELVFTETAWPDFDRDALEKAIEIYQHRNRRFGGLA 235
>gi|222054616|ref|YP_002536978.1| undecaprenyl diphosphate synthase [Geobacter sp. FRC-32]
gi|221563905|gb|ACM19877.1| undecaprenyl diphosphate synthase [Geobacter sp. FRC-32]
Length = 249
Score = 209 bits (532), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 99/235 (42%), Positives = 143/235 (60%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
SS P H+ +IMDGNGRWA + L R GH+KG+E IV +++ I LT+FAFS N
Sbjct: 7 SSLPHHLAVIMDGNGRWAKQQMLKRIVGHQKGVETVRLIVEECSKLEIAYLTLFAFSAEN 66
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP +E+ L+ L+K F++ + NNI+ VIGNR L DI + A +T N
Sbjct: 67 WLRPKTEVKALMALLKKFVRSELGRMMSNNIRFNVIGNRTELPADINAEISAAIAKTETN 126
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
TG+ L +A +Y R EI+ A + I D+ +G++ ++D YL T+ +P+PD +IR
Sbjct: 127 TGMLLTLALSYGGRQEIAGAARKIACDVAAGNIKPEEIDEKTFNNYLYTAAMPEPDFLIR 186
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
T GE R+S+FLLWQ+AY+E F WPDF ++ + A + Y R+RRFG S +
Sbjct: 187 TSGEMRISNFLLWQLAYTELYFSDVNWPDFDKKELYKAFHHYQSRERRFGKTSDQ 241
>gi|160944137|ref|ZP_02091367.1| hypothetical protein FAEPRAM212_01639 [Faecalibacterium prausnitzii
M21/2]
gi|158444813|gb|EDP21817.1| hypothetical protein FAEPRAM212_01639 [Faecalibacterium prausnitzii
M21/2]
Length = 237
Score = 209 bits (532), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 97/226 (42%), Positives = 143/226 (63%), Gaps = 1/226 (0%)
Query: 14 IGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVS 73
IGIIMDGNGRWA RGLPR AGH+KG VF +I E+G+ ++ +AFS NW+RP+
Sbjct: 13 IGIIMDGNGRWAKNRGLPRTAGHKKGAAVFKDIANYCDELGVASVYFYAFSTENWKRPLE 72
Query: 74 EISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLF 133
E+ ++KL +L +GF K NI+++ +G+R +LD + ++ E E + TG+ L
Sbjct: 73 EVGAIMKLFAQYLIEGF-DYKNRNIRIKFLGDRTALDPKLQKMMNELEGDSACKTGMTLN 131
Query: 134 IAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKR 193
IA NY R EI RA + + + +G + D++ +++ + T+ DPD I+R GEKR
Sbjct: 132 IAINYGGRPEIVRAAQQLAAKVVAGEIRPEDINEQMMSDAMYTAGQKDPDFILRPSGEKR 191
Query: 194 LSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
LS+F+LWQ AYSE V + WPDF+R A+ ++N R RRFGG+
Sbjct: 192 LSNFMLWQAAYSELVEMDVLWPDFTRADLDTAIEEFNHRSRRFGGI 237
>gi|149369709|ref|ZP_01889561.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase)
[unidentified eubacterium SCB49]
gi|149357136|gb|EDM45691.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase)
[unidentified eubacterium SCB49]
Length = 245
Score = 209 bits (532), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 149/232 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA +GL R GH+ G + E V A++ + LT++AFS NW+R
Sbjct: 13 PQHIAIIMDGNGRWAKQKGLLRAIGHQNGSKAVRETVETCAKLNVPYLTLYAFSTENWKR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL+ S LKK +L+ N+IK+ IGN SL L++ +T+ N+ +
Sbjct: 73 PKLEVETLMKLLVSSLKKEIKTLQDNDIKLNAIGNLESLPPKAQRELQDVISKTKQNSRM 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y +R+EI++ I+ I +++ + D+D L+ +L T+++PD DL+IRT G
Sbjct: 133 TLTLALSYGAREEITKTIREISLKVKNNLISPLDIDERLVNDHLYTNNLPDVDLLIRTSG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FLLWQ+AY+E F WPDF+++ F A+ Y R+RRFG S++
Sbjct: 193 EQRISNFLLWQIAYAELSFTETLWPDFTKKHLFEAILNYQNRERRFGKTSEQ 244
>gi|260592025|ref|ZP_05857483.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella veroralis
F0319]
gi|260536309|gb|EEX18926.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella veroralis
F0319]
Length = 250
Score = 209 bits (532), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 100/245 (40%), Positives = 151/245 (61%), Gaps = 5/245 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
MV + + P+HI IIMDGNGRWA R PR GH+ G+E I + +G+K LT+
Sbjct: 1 MVEELDMTRIPEHIAIIMDGNGRWATERNKPRSYGHQAGVETVRRITSECVRLGVKYLTL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW RP EI+ L+ L+ + L+ + KNN++ RVIG+ L ++ L+E
Sbjct: 61 YTFSTENWSRPSDEIAALMGLVLTSLEDEIF--MKNNVRFRVIGDIGRLPIEVQQKLRET 118
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIF---QDIESGSVCSHDVDSSLIAKYLDTS 177
E+ T N+ + + +A +YSSR EI++A+++I Q E S+ + L++K++ T+
Sbjct: 119 EEHTEKNSAMTMVVALSYSSRWEITKAVQDIIAENQGNEKVSLRPEMITEELLSKHMQTN 178
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+PDPDL+IRTGGE R+S++LLWQ+AYSE F YWPDF + HA+ + R RRFG
Sbjct: 179 FMPDPDLLIRTGGELRISNYLLWQIAYSELYFCDTYWPDFGEDDLQHAIYSFQKRQRRFG 238
Query: 238 GLSKK 242
++
Sbjct: 239 KTERQ 243
>gi|224476383|ref|YP_002633989.1| undecaprenyl pyrophosphate synthase [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222420990|emb|CAL27804.1| putative undecaprenyl pyrophosphatase synthetase [Staphylococcus
carnosus subsp. carnosus TM300]
Length = 255
Score = 209 bits (532), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 98/229 (42%), Positives = 141/229 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R +PR GH +G++ +I AA ++G+K LT++AFS NW R
Sbjct: 26 PEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITRAANDIGVKYLTLYAFSTENWSR 85
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ ++ L +FLK L + N+KV IG L + + A+++T N GL
Sbjct: 86 PEQEVNYIMNLPVNFLKTFLPELIERNVKVETIGFTDDLPASTMKAINHAKEKTAQNDGL 145
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY R EI+ +++ +F D+ S D+ I YL TS PDP+L+IRT G
Sbjct: 146 KLIFAINYGGRAEITDSVRRMFDDMIERGQNSSDITEETINDYLMTSQYPDPELLIRTSG 205
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+R+S+FL+WQ++YSEF+F + WPDF + + + Y R RRFGGL
Sbjct: 206 EQRISNFLIWQISYSEFIFDQKLWPDFDEDELKNCIKIYQKRQRRFGGL 254
>gi|313115646|ref|ZP_07801102.1| di-trans,poly-cis-decaprenylcistransferase [Faecalibacterium cf.
prausnitzii KLE1255]
gi|310622032|gb|EFQ05531.1| di-trans,poly-cis-decaprenylcistransferase [Faecalibacterium cf.
prausnitzii KLE1255]
Length = 237
Score = 209 bits (532), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 97/226 (42%), Positives = 145/226 (64%), Gaps = 1/226 (0%)
Query: 14 IGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVS 73
IGIIMDGNGRWA RGLPR AGH++G EVF++I E+G+ ++ +AFS NW+RP+
Sbjct: 13 IGIIMDGNGRWAKNRGLPRTAGHKRGAEVFSDIADYCDELGVSSVYFYAFSTENWKRPLE 72
Query: 74 EISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLF 133
E++ +++L +L KGF K NI+++ +G+R LD+ + ++ + E + + TG+ L
Sbjct: 73 EVNAIMRLFGEYLLKGF-DYKNRNIRIKFMGDRTVLDEKLQQLMNKLEADSSVKTGMTLN 131
Query: 134 IAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKR 193
IA NY R EI RA + + +G + ++ L++ + T+ DPD I+R GEKR
Sbjct: 132 IAINYGGRPEIVRAAQQLATKAAAGEIKPEEITEQLLSDAMYTAGQKDPDFILRPSGEKR 191
Query: 194 LSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
LS+F+LWQ AYSE V + WPDF+R A+ ++N R RRFGGL
Sbjct: 192 LSNFMLWQAAYSELVEMDVLWPDFTRSDLDAAIEEFNHRSRRFGGL 237
>gi|157692332|ref|YP_001486794.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus pumilus
SAFR-032]
gi|157681090|gb|ABV62234.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus pumilus
SAFR-032]
Length = 260
Score = 209 bits (532), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 102/235 (43%), Positives = 142/235 (60%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+++ P+HI IIMDGNGRWA R LPR AGH +G++V + A E+ +K LT++AFS
Sbjct: 26 ILNGEIPEHIAIIMDGNGRWAKKRALPRVAGHHEGMKVVKRMTKLANELNVKVLTLYAFS 85
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+ L+KL + FL L + N++VR+ G+ L ++ A T
Sbjct: 86 TENWKRPKLEVDFLMKLPEEFLNIYLPELIEENVRVRLTGDPDGLPQHTKRAVENAVKST 145
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N GL L A NY R EI A + I + ++ G + + D+ + + YL T + DPDL
Sbjct: 146 TNNDGLVLNFALNYGGRTEIVSACRQISEKVKEGKLQAEDITEEMFSAYLMTESLQDPDL 205
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE RLS+F+LWQ+AYSEFVF WPDFS E A+ +Y R RRFGG+
Sbjct: 206 LIRTSGEIRLSNFMLWQIAYSEFVFTDVLWPDFSDEHLIGAIGEYQRRGRRFGGI 260
>gi|258516350|ref|YP_003192572.1| undecaprenyl diphosphate synthase [Desulfotomaculum acetoxidans DSM
771]
gi|257780055|gb|ACV63949.1| undecaprenyl diphosphate synthase [Desulfotomaculum acetoxidans DSM
771]
Length = 266
Score = 209 bits (532), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 101/239 (42%), Positives = 147/239 (61%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++AS+ + P HI IIMDGNGRWA RGLPR GHR G++ IV ++ I+ LT
Sbjct: 25 LIASIDPARLPKHIAIIMDGNGRWAKKRGLPRALGHRAGVDALRNIVKLCRQLEIEYLTC 84
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E++ L+ L+ FL+K L N ++V IG L L+ A
Sbjct: 85 YAFSTENWKRPPKEVTALMNLLVEFLQKEIDELCANYVRVSSIGRTEELPPAAQKALQMA 144
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+++ N GL L +A NY R E+ A++ + ++++ G V +D + I +YL TS++P
Sbjct: 145 VNKSSNNNGLILNLALNYGGRAELVEAVRQLAREVKQGLVDPEAIDENTIGRYLYTSELP 204
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRT G+ R+S+FLLWQ+AY+EF P WPDF +A+ Y R+RRFGG+
Sbjct: 205 DPDLLIRTSGDFRISNFLLWQLAYTEFWLTPVLWPDFKPLHLLNAIVDYQNRERRFGGI 263
>gi|291515265|emb|CBK64475.1| Undecaprenyl pyrophosphate synthetase [Alistipes shahii WAL 8301]
Length = 237
Score = 209 bits (532), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 99/227 (43%), Positives = 137/227 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG R GH G+E + AAA G+K LT++AFS NW R
Sbjct: 8 PQHVAIIMDGNGRWAELRGKERYEGHAAGVEPVRASLRAAARWGVKYLTLYAFSTENWGR 67
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L + L + ++VR+IG+R + + L AE+QT L
Sbjct: 68 PAEEVDSLMELFCKSVVNETPELIRQGVEVRMIGDRSRFSEKVRSYLAMAEEQTAGGRTL 127
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NYSSR EI+ A++ I Q +E+G + ++ I+ L T+ P+PDLI+RT G
Sbjct: 128 TLILALNYSSRSEITHAVQQIAQRVEAGQIAPSEISEETISTALYTAPYPNPDLIVRTSG 187
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+RLS+FLLWQ +Y+E F WPDF+ E F A+ +Y RDRRFG
Sbjct: 188 EQRLSNFLLWQASYAELWFPEVLWPDFTEEEFDRAMEEYARRDRRFG 234
>gi|284928892|ref|YP_003421414.1| undecaprenyl diphosphate synthase [cyanobacterium UCYN-A]
gi|284809351|gb|ADB95056.1| undecaprenyl diphosphate synthase [cyanobacterium UCYN-A]
Length = 250
Score = 209 bits (531), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 96/229 (41%), Positives = 137/229 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA RGLPR GH++G+ +++ ++GI LT +AFS NW R
Sbjct: 22 PSHIAVIMDGNGRWAKNRGLPRIVGHQRGVGTLKDLLRYCRDLGIPALTAYAFSTENWGR 81
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P+ E+ L+ L ++ L + + N+K+R +GN L + + + T NTG+
Sbjct: 82 PLQEVEFLMALFETVLHRELQEMMAENVKIRFVGNLEELPSSLQSEIFRSMKNTENNTGV 141
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
IA NY R EI ++ + I ++ G + +D+D SL YL T D+P PDL+IRT G
Sbjct: 142 QFTIATNYGGRQEIVQSCRTIAMKVKQGLLNINDIDESLFENYLYTKDIPHPDLLIRTSG 201
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+FLLWQ+AY+E WPDF+ + F+ AL +Y R RRFG L
Sbjct: 202 EMRLSNFLLWQLAYAEIYVTSTLWPDFTYKTFYEALLEYQHRQRRFGKL 250
>gi|332284283|ref|YP_004416194.1| undecaprenyl pyrophosphate synthetase [Pusillimonas sp. T7-7]
gi|330428236|gb|AEC19570.1| undecaprenyl pyrophosphate synthetase [Pusillimonas sp. T7-7]
Length = 250
Score = 209 bits (531), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 96/236 (40%), Positives = 147/236 (62%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S+ P H+ IIMDGNGRWA R LPR AGH +G++ +V A E G+K LT+FAFS
Sbjct: 12 STDTPQHVAIIMDGNGRWATKRFLPRTAGHMRGVQAVRRVVEACGERGVKYLTLFAFSSE 71
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+S L++L L+K L+K +++ ++G+ + + + +++EA+ +T
Sbjct: 72 NWRRPKEEVSVLMRLFMQTLEKQVGKLEKQGVRLHIVGDLSAFEPRLQDMIQEAQVRTAA 131
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N L+L IA NY R +I +A++ + + + ++ S +A+YL + P+PDL I
Sbjct: 132 NDALHLTIAANYGGRWDILQALRKLLAAQPELAASTQPIEESQLAQYLSMAYAPEPDLFI 191
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE+R+S+FL+WQ+AY+E F +YWPDF + A Y R+RRFG S +
Sbjct: 192 RTGGEQRISNFLIWQLAYTELYFSDDYWPDFGAKEIDTAFAWYRTRERRFGRTSAQ 247
>gi|194014998|ref|ZP_03053615.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus pumilus ATCC
7061]
gi|194014024|gb|EDW23589.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus pumilus ATCC
7061]
Length = 260
Score = 209 bits (531), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 102/235 (43%), Positives = 142/235 (60%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+++ P+HI IIMDGNGRWA R LPR AGH +G++V + A E+ +K LT++AFS
Sbjct: 26 ILNGEIPEHIAIIMDGNGRWAKKRALPRVAGHHEGMKVVKRMTKLANELNVKVLTLYAFS 85
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+ L+KL + FL L + N++VR+ G+ L ++ A T
Sbjct: 86 TENWKRPKLEVDFLMKLPEEFLNIYLPELIEENVRVRLTGDPDGLPQHTKRAVENAVKST 145
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N GL L A NY R EI A + I + ++ G + + D+ + + YL T + DPDL
Sbjct: 146 TNNDGLILNFALNYGGRTEIVSACRQISEKVKEGKLQAEDITEEMFSAYLMTESLQDPDL 205
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE RLS+F+LWQ+AYSEFVF WPDFS E A+ +Y R RRFGG+
Sbjct: 206 LIRTSGEIRLSNFMLWQIAYSEFVFTDVLWPDFSDEHLIGAIGEYQRRGRRFGGI 260
>gi|225012219|ref|ZP_03702656.1| undecaprenyl diphosphate synthase [Flavobacteria bacterium
MS024-2A]
gi|225003774|gb|EEG41747.1| undecaprenyl diphosphate synthase [Flavobacteria bacterium
MS024-2A]
Length = 239
Score = 209 bits (531), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 102/232 (43%), Positives = 146/232 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA RG R GH+KG EI+ AA+ GIK LT+F FS NW R
Sbjct: 5 PEHVAIIMDGNGRWANQRGKQRGMGHKKGASAVREIIEEAADNGIKYLTLFTFSTENWSR 64
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L+ S LKK F L NNIK++ IG+ L + L ++T+ NTGL
Sbjct: 65 PEDEVGILMRLLLSSLKKEFNRLNNNNIKLKSIGDLEGLPHLVREELNYVVEKTKDNTGL 124
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY +++E++ A++ I +++ + VD S+I ++L + +P DL+IRT G
Sbjct: 125 TLTLALNYGAKEELTNAMRTIANKVKNSIISPEKVDQSMINEHLYSHYLPAVDLLIRTSG 184
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FLLW +AY+E F WPDFS+E AL Y R+RRFG S++
Sbjct: 185 EERISNFLLWHIAYAELYFTTTLWPDFSKEDLKKALINYGKRERRFGKTSEQ 236
>gi|194289788|ref|YP_002005695.1| undecaprenyl pyrophosphate synthetase (di-trans,
poly-cis-decaprenylcistransferase) [Cupriavidus
taiwanensis LMG 19424]
gi|193223623|emb|CAQ69630.1| undecaprenyl pyrophosphate synthetase (di-trans,
poly-cis-decaprenylcistransferase) [Cupriavidus
taiwanensis LMG 19424]
Length = 256
Score = 209 bits (531), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 103/236 (43%), Positives = 145/236 (61%), Gaps = 2/236 (0%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+S P H+ IIMDGNGRWA R LPR AGH +G++ +V A A G++ LT+FAFS
Sbjct: 13 TSYVPRHVAIIMDGNGRWATQRHLPRVAGHSRGLDAVRAVVEACAARGVQYLTLFAFSSE 72
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+S L++L L++ + NNI++RV+G+ I ++K+AE +T
Sbjct: 73 NWRRPADEVSFLMRLFMMSLRREVVKMHANNIRLRVVGDLSRFSPRIQRLIKDAEARTAG 132
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTGL + IA NY R ++ +A++ + S + +D SL+A +L + P+PDL I
Sbjct: 133 NTGLTVTIAANYGGRWDLLQAMRKMLA--RSPMLDPETIDESLLAPHLAMAYAPEPDLFI 190
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE+R+S+FLLWQ+AYSE F YWPDF A Y R+RRFG S +
Sbjct: 191 RTGGEQRISNFLLWQLAYSELYFTDVYWPDFDAAELDKAFASYRQRERRFGRTSAQ 246
>gi|299783103|gb|ADJ41101.1| Undecaprenyl diphosphate synthase [Lactobacillus fermentum CECT
5716]
Length = 255
Score = 209 bits (531), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 99/235 (42%), Positives = 148/235 (62%), Gaps = 3/235 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +R LPR AGH++G++ ++ AA+++GIK LT++AFS NW+R
Sbjct: 21 PHHVAIIMDGNGRWAQSRHLPRVAGHQQGMQTVKKVTMAASDLGIKALTLYAFSTENWKR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L++L F L +N++V V+G+ L ++ A D T+ TG+
Sbjct: 81 PSTEVKFLMQLPIRFFNTFVPDLVAHNVRVMVMGDTTKLPAGTQKAVQGALDATKDCTGM 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV---PDPDLIIR 187
L A NY RDEI RA + + + + +G + + LI++ + T+ + DP++IIR
Sbjct: 141 VLNFALNYGGRDEIVRATQAVAKXVAAGELTPDAISEELISREMMTAPLGQFADPEVIIR 200
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
T GE+RLS+F+LWQ AYSE VF+ E+WPDF + AL + R RRFGGL+ K
Sbjct: 201 TSGEERLSNFMLWQAAYSELVFVDEHWPDFDGDSLKRALATFQSRHRRFGGLNNK 255
>gi|170289220|ref|YP_001739458.1| undecaprenyl diphosphate synthase [Thermotoga sp. RQ2]
gi|170176723|gb|ACB09775.1| undecaprenyl diphosphate synthase [Thermotoga sp. RQ2]
Length = 233
Score = 209 bits (531), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 105/230 (45%), Positives = 144/230 (62%), Gaps = 2/230 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RGLPR GH++G EV + V + E+GIK LT F+FS NW+R
Sbjct: 4 PQHVAIIMDGNGRWAKKRGLPRIKGHQRGAEVLHNTVKWSLELGIKYLTAFSFSTENWKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L + + L++ ++VR++G + L + +L KE E++T+ +
Sbjct: 64 PKEEVEFLMDLFVQMIDREMELLRRERVRVRILGRKEGLPERVLKKWKEVEEKTKEFDRM 123
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IAFNY R EI A+++I +D G ++ +YL DVPDPDLIIRT G
Sbjct: 124 TLIIAFNYGGRREILDAVESILKDASQGKKI--ELTEETFRQYLYLPDVPDPDLIIRTSG 181
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E RLS+FLLWQ AYSE F + WPDF++ F A+ Y+ R+RRFGGLS
Sbjct: 182 EMRLSNFLLWQSAYSELYFFKKLWPDFTKRDFLRAIESYSKRERRFGGLS 231
>gi|227514717|ref|ZP_03944766.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus fermentum
ATCC 14931]
gi|260662306|ref|ZP_05863202.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus fermentum
28-3-CHN]
gi|227086921|gb|EEI22233.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus fermentum
ATCC 14931]
gi|260553689|gb|EEX26581.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus fermentum
28-3-CHN]
Length = 257
Score = 209 bits (531), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 99/235 (42%), Positives = 148/235 (62%), Gaps = 3/235 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +R LPR AGH++G++ ++ AA+++GIK LT++AFS NW+R
Sbjct: 23 PHHVAIIMDGNGRWAQSRHLPRVAGHQQGMQTVKKVTMAASDLGIKALTLYAFSTENWKR 82
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L++L F L +N++V V+G+ L ++ A D T+ TG+
Sbjct: 83 PSTEVKFLMQLPIRFFNTFVPDLVAHNVRVMVMGDTTKLPAGTQKAVQGALDATKDCTGM 142
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV---PDPDLIIR 187
L A NY RDEI RA + + + + +G + + LI++ + T+ + DP++IIR
Sbjct: 143 VLNFALNYGGRDEIVRATQAVAKRVATGELTPDAISEELISREMMTAPLGQFADPEVIIR 202
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
T GE+RLS+F+LWQ AYSE VF+ E+WPDF + AL + R RRFGGL+ K
Sbjct: 203 TSGEERLSNFMLWQAAYSELVFVDEHWPDFDGDSLKRALATFQSRHRRFGGLNNK 257
>gi|15237748|ref|NP_200685.1| dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase,
putative [Arabidopsis thaliana]
gi|85541788|sp|Q56Y11|DDPS2_ARATH RecName: Full=Dehydrodolichyl diphosphate synthase 2;
Short=Dedol-PP synthase 2
gi|8843797|dbj|BAA97345.1| unnamed protein product [Arabidopsis thaliana]
gi|208879536|gb|ACI31313.1| At5g58770 [Arabidopsis thaliana]
gi|332009713|gb|AED97096.1| dehydrodolichyl diphosphate synthase 2 [Arabidopsis thaliana]
Length = 310
Score = 208 bits (530), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 104/230 (45%), Positives = 143/230 (62%), Gaps = 2/230 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RGL GHR G+E EIV + GI+ LT+FAFS +NW R
Sbjct: 78 PKHVAIIMDGNGRWAKNRGLQPWDGHRAGVEALKEIVELCGKWGIQVLTVFAFSTDNWIR 137
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EI L L + LK F +L KNN+++ +IG+ L +L V+ E E+ T+ NT L
Sbjct: 138 PRIEIDFLFSLFERSLKTEFQNLAKNNVRISIIGDSSKLPKSLLRVINEVEEVTKNNTRL 197
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT--SDVPDPDLIIRT 188
L +A YS + ++ +A + I + ++ G + ++D LI + L+T ++ P PDL+IRT
Sbjct: 198 QLIVAVGYSGKYDVLQACRGIARRVKDGEIEVEEIDERLIEEELETNCTEFPYPDLLIRT 257
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GE R+S+FLLWQ+AY+E F E WPDF R F AL + R RRFGG
Sbjct: 258 SGELRVSNFLLWQLAYTELFFAQELWPDFGRSGFIEALMSFQQRQRRFGG 307
>gi|331267092|ref|YP_004326722.1| undecaprenyl diphosphate synthase [Streptococcus oralis Uo5]
gi|326683764|emb|CBZ01382.1| undecaprenyl diphosphate synthase [Streptococcus oralis Uo5]
Length = 252
Score = 208 bits (530), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 106/233 (45%), Positives = 138/233 (59%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HIGIIMDGNGRWA R PR GH+ G+E ++ AA ++G+K +T++AFS NW R
Sbjct: 20 PNHIGIIMDGNGRWAKRRMQPRVFGHKAGMEALQKVTKAANKLGVKVITVYAFSTENWTR 79
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ ++ L F L NN+K+++IG L L +AE+ T+ NTGL
Sbjct: 80 PDQEVKFIMNLPVEFYDNYVPELHANNVKIQMIGETDRLPKPTFEALTKAEELTKNNTGL 139
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI++A+K I QD+ + D+ LI YL T +P DPDLII
Sbjct: 140 ILNFALNYGGRAEITQAVKLISQDVLDAKINPGDITEELIGNYLFTQHLPKDVRDPDLII 199
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSE F+ WPDF E A+ YN R RRFGG+
Sbjct: 200 RTSGELRLSNFLPWQGAYSELYFMDTLWPDFDEEALQEAILAYNRRHRRFGGV 252
>gi|83589886|ref|YP_429895.1| undecaprenyl pyrophosphate synthetase [Moorella thermoacetica ATCC
39073]
gi|83572800|gb|ABC19352.1| Undecaprenyl pyrophosphate synthetase [Moorella thermoacetica ATCC
39073]
Length = 259
Score = 208 bits (530), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 102/230 (44%), Positives = 139/230 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +RGLPR AGHR G+E +IV A + GI LT++AFS NW+R
Sbjct: 29 PRHVAIIMDGNGRWARSRGLPRLAGHRAGVESLRDIVRACVDWGIGILTVYAFSTENWKR 88
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L+ +L++ L++ ++VR IG L L+ A +T N L
Sbjct: 89 PHEEVEGLMNLLVEYLRRELAELRREGVQVRAIGRLEGLPRQAREELERARKETAANKRL 148
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY R E+ A + I + G + ++D +I +L T+ +PDPDL+IR G
Sbjct: 149 ILNLALNYGGRSELVDACRRIATLVARGELDPGEIDEEVINNFLYTAGLPDPDLLIRPSG 208
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E R+S+FLLWQ+AY+EF YWPDF RE AL Y R+RRFGGL
Sbjct: 209 EMRVSNFLLWQLAYTEFWVTDIYWPDFRREDLRRALLDYQQRERRFGGLK 258
>gi|158334147|ref|YP_001515319.1| undecaprenyl pyrophosphate synthase [Acaryochloris marina
MBIC11017]
gi|158304388|gb|ABW26005.1| undecaprenyl diphosphate synthase [Acaryochloris marina MBIC11017]
Length = 255
Score = 208 bits (530), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 95/232 (40%), Positives = 141/232 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA +G PR AGHR+G ++V + GI LT +AFS NWRR
Sbjct: 19 PQHVAVIMDGNGRWAKRQGFPRIAGHRQGARTLKDLVRCCKDWGIPTLTAYAFSTENWRR 78
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P+ E+ L+ L + L++ + + +++ IG+ L + + A T N +
Sbjct: 79 PLEEVDFLLVLFERLLRQELAEMDREGVRISFIGDLSPLPSSLRKEIDRAVLATANNRAV 138
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ +A NY SR E+++A + I + ++ G++ VD LI +YL T+ PDPDL+IR+ G
Sbjct: 139 HFNVAVNYGSRAELTQACRQIAEQVQLGNIEPGAVDEQLIEQYLYTAGTPDPDLLIRSSG 198
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E RLS++LLWQ+AY+EF F +WPDF R +F AL Y +RDRRFG + K
Sbjct: 199 ELRLSNYLLWQLAYTEFYFTDVFWPDFDRAVFHEALQHYQMRDRRFGTVKLK 250
>gi|257876616|ref|ZP_05656269.1| undecaprenyl pyrophosphate synthetase [Enterococcus casseliflavus
EC20]
gi|257810782|gb|EEV39602.1| undecaprenyl pyrophosphate synthetase [Enterococcus casseliflavus
EC20]
Length = 266
Score = 208 bits (530), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 102/236 (43%), Positives = 145/236 (61%), Gaps = 4/236 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH++G+E +I A+ +G+K LT++AFS NW+R
Sbjct: 27 PQHIAIIMDGNGRWAQNRRLPRVAGHKEGMETVKKITKHASHLGVKVLTLYAFSTENWKR 86
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L F L K N++V+V+G SL + +K A DQT+ NTG+
Sbjct: 87 PNEEVDFLMQLPVDFFDTFVPELIKENVQVKVMGFTESLPEHTQEAVKRAIDQTKDNTGM 146
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY SR EI A++ +++++ + + ++A +L T +P DP+L+I
Sbjct: 147 ILNFALNYGSRAEILTAVQALYEELAASEEALPKLTEDMLATHLMTGFLPNALRDPELVI 206
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE+R+S+FLLWQ+AYSE F WPDF L A+ + R+RRFGGL K
Sbjct: 207 RTSGEERISNFLLWQIAYSELFFTKALWPDFDAALLEDAIGSFQQRNRRFGGLKTK 262
>gi|184155194|ref|YP_001843534.1| undecaprenyl diphosphate synthase [Lactobacillus fermentum IFO
3956]
gi|183226538|dbj|BAG27054.1| undecaprenyl diphosphate synthase [Lactobacillus fermentum IFO
3956]
Length = 257
Score = 208 bits (530), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 99/235 (42%), Positives = 148/235 (62%), Gaps = 3/235 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +R LPR AGH++G++ ++ AA+++GIK LT++AFS NW+R
Sbjct: 23 PHHVAIIMDGNGRWAQSRHLPRVAGHQQGMQTVKKVTMAASDLGIKALTLYAFSTENWKR 82
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L++L F L +N++V V+G+ L ++ A D T+ TG+
Sbjct: 83 PSTEVKFLMQLPIRFFNTFVPDLVAHNVRVMVMGDTTKLPAGTQKAVQGALDATKDCTGM 142
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV---PDPDLIIR 187
L A NY RDEI RA + + + + +G + + LI++ + T+ + DP++IIR
Sbjct: 143 VLNFALNYGGRDEIVRATQAVAKRVAAGELTPDAISEELISREMMTAPLGQFADPEVIIR 202
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
T GE+RLS+F+LWQ AYSE VF+ E+WPDF + AL + R RRFGGL+ K
Sbjct: 203 TSGEERLSNFMLWQAAYSELVFVDEHWPDFDGDSLKRALATFQSRHRRFGGLNNK 257
>gi|166365279|ref|YP_001657552.1| undecaprenyl pyrophosphate synthetase [Microcystis aeruginosa
NIES-843]
gi|166087652|dbj|BAG02360.1| undecaprenyl pyrophosphate synthetase [Microcystis aeruginosa
NIES-843]
Length = 249
Score = 208 bits (530), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 93/229 (40%), Positives = 142/229 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA RGLPR GH++G++ +++ + GI LT +AFS NW R
Sbjct: 21 PQHVAVIMDGNGRWAKNRGLPRIMGHQRGVDALKDLLRCCRDWGIPALTAYAFSTENWGR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P+ E+ L+ L + L++ + + N+K+R IGN +L + + + +++ +T N+G+
Sbjct: 81 PLEEVEFLMTLFERVLRRELEEMMQQNVKIRFIGNLSALPESLRREIAKSQAETSKNSGI 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY R+EI +A + I + ++ G V +D SL +YL T+ +P+PDL+IR+ G
Sbjct: 141 QFTVATNYGGREEIVQACQAIARQVQQGLVSPEAIDESLFEQYLYTAGIPNPDLLIRSSG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+FLLWQ+AY+E WPDF R F AL Y R RRFG L
Sbjct: 201 EMRISNFLLWQMAYAEIYVTDTLWPDFDRVQFHRALKDYQGRHRRFGKL 249
>gi|320352946|ref|YP_004194285.1| Undecaprenyl pyrophosphate synthetase [Desulfobulbus propionicus
DSM 2032]
gi|320121448|gb|ADW16994.1| Undecaprenyl pyrophosphate synthetase [Desulfobulbus propionicus
DSM 2032]
Length = 249
Score = 208 bits (530), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 93/227 (40%), Positives = 140/227 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R PR GH+ G+E +V A +G++ LT++AFS NW R
Sbjct: 14 PRHVAIIMDGNGRWAEERHRPRLYGHKAGVESVRAVVETARSIGLEVLTLYAFSTENWNR 73
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E++ L+ L+KS+L+ ++ N+I++ +G + L D+ +L++ D+TR G+
Sbjct: 74 PSTEVNGLMGLLKSYLQAELRTMLSNDIRLHCLGQQDRLPSDVRAILQQTIDETRCCQGM 133
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y R EI A + + + + G + D+ S + +YL T+ DPDL+IRTGG
Sbjct: 134 ILNLALSYGGRSEIVGAARELARQCQQGRLDWQDISESTLGEYLFTAGQSDPDLLIRTGG 193
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E RLS+FLLWQ +Y+E F WPDF +E F A+ + R RRFG
Sbjct: 194 EHRLSNFLLWQASYAELYFTEVKWPDFRKEQFLEAIQTFQHRQRRFG 240
>gi|170782099|ref|YP_001710432.1| undecaprenyl phosphate synthetase [Clavibacter michiganensis subsp.
sepedonicus]
gi|169156668|emb|CAQ01826.1| undecaprenyl phosphate synthetase [Clavibacter michiganensis subsp.
sepedonicus]
Length = 288
Score = 208 bits (530), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 99/228 (43%), Positives = 143/228 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI ++MDGNGRWA RGLPR AGH+ G E + + VA A ++G +L+++AFS NW+R
Sbjct: 31 PKHIAVVMDGNGRWANQRGLPRTAGHQAGEEAWFDTVAGAVQLGATHLSVYAFSTENWKR 90
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
+E+ L+ + + + L N+++R G R L ++ L+ AE+ T+ NTG+
Sbjct: 91 SPAEVRFLMGFNRDVIHRRRDQLNAWNVRIRWAGRRPRLWRSVIDDLQVAEEMTKGNTGM 150
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R EI A+K I +D+++G + + VD I +YL DVPD DL IR+ G
Sbjct: 151 TLTMCINYGGRTEIGDAVKRIAEDVDAGRLKASRVDERTIQRYLYLPDVPDVDLFIRSSG 210
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S+FLLWQ AY+E VF+ WPDF R+ + A+ Y RDRRFGG
Sbjct: 211 EQRTSNFLLWQSAYAEMVFLDRLWPDFHRKDLWDAVESYVHRDRRFGG 258
>gi|254424564|ref|ZP_05038282.1| undecaprenyl diphosphate synthase [Synechococcus sp. PCC 7335]
gi|196192053|gb|EDX87017.1| undecaprenyl diphosphate synthase [Synechococcus sp. PCC 7335]
Length = 250
Score = 208 bits (530), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 92/227 (40%), Positives = 140/227 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA +RGLPR GHRKG++ +++ + G++ LT +AFS NW R
Sbjct: 21 PSHVAVIMDGNGRWAKSRGLPRIMGHRKGVDTLKKLLRCCRDWGVEALTAYAFSTENWGR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L + L++ + + N+++ +G+ L+L + + + A T+ N G+
Sbjct: 81 PTKEVDFLMTLFERVLRQELQEMMEENVRIEFVGDLLALPETLQKEIDRAVTLTKENYGI 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY R EI +A + I ++ G + D+D SL +++L TSD+ DPDL+IRT G
Sbjct: 141 RFSVATNYGGRQEILQACRAIATQVKQGHLNPEDIDESLFSRHLYTSDISDPDLLIRTSG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+FLLWQ+AYSEF WPDF F A+ + R+RRFG
Sbjct: 201 EMRISNFLLWQLAYSEFYITDTLWPDFDTSEFHQAMKAFQRRERRFG 247
>gi|325268402|ref|ZP_08135034.1| undecaprenyl diphosphate synthase [Prevotella multiformis DSM
16608]
gi|324989256|gb|EGC21207.1| undecaprenyl diphosphate synthase [Prevotella multiformis DSM
16608]
Length = 250
Score = 208 bits (530), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 146/245 (59%), Gaps = 5/245 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
MV + + P HI IIMDGNGRWA R PR GH+ G+E I + +G+K LT+
Sbjct: 1 MVEELDMTRIPRHIAIIMDGNGRWATERNKPRSYGHQAGVETVRRITSECVRLGVKYLTL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW RP EI+ L+ L+ + L+ + KNN++ RVIG+R L +++ L+E
Sbjct: 61 YTFSTENWNRPTDEIAALMGLVLTSLEDEIFM--KNNVRFRVIGDRERLPEEVQEKLRET 118
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCS---HDVDSSLIAKYLDTS 177
E T N + + +A +YS+R EI++A+K I + + + + L+ +++ T+
Sbjct: 119 EQHTEKNAAMTMVVALSYSARWEITQAMKEIVTEHQQENTVPLRPEMITEELLDRHMQTN 178
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+PDPDL+IRTGGE R+S++LLWQ+AYSE F YWPDFS A+ + R RRFG
Sbjct: 179 FMPDPDLLIRTGGELRISNYLLWQIAYSELYFCDTYWPDFSEHDLQKAITSFQSRQRRFG 238
Query: 238 GLSKK 242
K+
Sbjct: 239 KTEKQ 243
>gi|298386831|ref|ZP_06996386.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides sp. 1_1_14]
gi|298260505|gb|EFI03374.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides sp. 1_1_14]
Length = 244
Score = 208 bits (529), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 145/232 (62%), Gaps = 2/232 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA RG R GH+ G E ++I+ AA +G+K LT++ FS NW R
Sbjct: 13 PQHIAIIMDGNGRWAKQRGKERTYGHQAGAETVHKIIEDAARLGVKYLTLYTFSTENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L+ +++ +L KNNI+ R+IG+ L ++ L + T NTG
Sbjct: 73 PQEEVTALMNLLLDSIEEE--TLMKNNIRFRIIGDIKKLPAEVQEGLSRCIEHTANNTGT 130
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +YSSR E++ A++ I ++G + + I +L T+ +PDPDL+IRTGG
Sbjct: 131 CLVLALSYSSRWEMTEAVRQIATLAKTGEISPEQITDEYITAHLTTNFMPDPDLLIRTGG 190
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E RLS++LLWQ AYSE F +WPDF +E F A+ +Y R+RRFG S++
Sbjct: 191 EIRLSNYLLWQCAYSELYFCDTFWPDFDKEEFCKAIYEYQQRERRFGKTSEQ 242
>gi|293364309|ref|ZP_06611035.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus oralis
ATCC 35037]
gi|307702725|ref|ZP_07639677.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus oralis
ATCC 35037]
gi|291317155|gb|EFE57582.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus oralis
ATCC 35037]
gi|307623841|gb|EFO02826.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus oralis
ATCC 35037]
Length = 252
Score = 208 bits (529), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 104/233 (44%), Positives = 138/233 (59%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA R PR GH+ G+E +I AA ++G+K +T++AFS NW R
Sbjct: 20 PAHIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQKITKAANKMGVKVITVYAFSTENWTR 79
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ ++ L F L NN+K+++IG L LK+AE+ T+ NTGL
Sbjct: 80 PDQEVKFIMNLPVEFYDNYVPELHANNVKIQMIGETDRLPKPTFEALKKAEELTKNNTGL 139
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI++A+K++ QD+ + D+ +I YL T +P DPDLII
Sbjct: 140 ILNFALNYGGRAEITQALKSLAQDVLDAKINPGDITEDMIGDYLFTQHLPKDLRDPDLII 199
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSE F WPDF A+ +N R+RRFGG+
Sbjct: 200 RTSGELRLSNFLPWQAAYSELYFTDTLWPDFDEAALQEAIAAFNHRNRRFGGV 252
>gi|78043658|ref|YP_360601.1| undecaprenyl diphosphate synthase [Carboxydothermus
hydrogenoformans Z-2901]
gi|77995773|gb|ABB14672.1| undecaprenyl diphosphate synthase [Carboxydothermus
hydrogenoformans Z-2901]
Length = 255
Score = 208 bits (529), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 98/230 (42%), Positives = 139/230 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA RG+PR GHR G+E +V A++ + LT++AFS NWRR
Sbjct: 24 PRHIAIIMDGNGRWAKKRGMPRYFGHRAGVETVRRVVKFCAKLNVPYLTLYAFSTENWRR 83
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L+ +++K L + +++ VIG L + L + ++T N+ L
Sbjct: 84 PQEEVNVLMNLLVEYIEKETDELNREGVRLTVIGEISELPEKARIALAQGIEKTCHNSRL 143
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL +A NY R EI A + I +I++G + +D + A YL T + PDPDL+IR G
Sbjct: 144 NLILALNYGGRREIVEAARKIAYEIKNGKLSPEQIDEKVFANYLYTKEFPDPDLLIRPSG 203
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E R+S+FLLWQ+AYSE WPDFS E A+ Y R+RRFGG++
Sbjct: 204 EIRISNFLLWQIAYSEIWLTDVLWPDFSEEHLLQAIKDYQKRERRFGGVN 253
>gi|257470870|ref|ZP_05634960.1| undecaprenyl pyrophosphate synthetase [Fusobacterium ulcerans ATCC
49185]
gi|317065072|ref|ZP_07929557.1| undecaprenyl pyrophosphate synthetase [Fusobacterium ulcerans ATCC
49185]
gi|313690748|gb|EFS27583.1| undecaprenyl pyrophosphate synthetase [Fusobacterium ulcerans ATCC
49185]
Length = 230
Score = 208 bits (529), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 106/234 (45%), Positives = 148/234 (63%), Gaps = 7/234 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M S P+HI IIMDGNGRWA RGLPR GH++G +I+ A ++G+K LT++AFS
Sbjct: 1 MESKIPNHIAIIMDGNGRWAEKRGLPRTLGHKEGANALRKIITYAGKIGVKYLTVYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+R E+ L+ L K++LK S+ KNN++ V G + + +L +K+ ED+++
Sbjct: 61 ENWKRSKDEVDALMFLFKTYLKNEEKSIMKNNVRFLVSGRKDDVSPSLLKAIKKLEDKSK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
NTGL L IAFNY R EI A+ +I + SG + D S KYL +++PDP+L+
Sbjct: 121 NNTGLTLNIAFNYGGRAEIVDAVNSILK---SGIDNLAEEDFS---KYL-YNNIPDPELL 173
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+RT GE R+S+FLLWQ+AYSE WPDF + A+ YN RDRRFGG+
Sbjct: 174 VRTSGELRISNFLLWQIAYSEIYITDALWPDFDEKELDKAIESYNGRDRRFGGV 227
>gi|325859894|ref|ZP_08173024.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella denticola
CRIS 18C-A]
gi|325482820|gb|EGC85823.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella denticola
CRIS 18C-A]
Length = 250
Score = 208 bits (529), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 146/245 (59%), Gaps = 5/245 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
MV + + P HI IIMDGNGRWA R PR GH+ G+E I + +G+K LT+
Sbjct: 1 MVEELDMTRIPRHIAIIMDGNGRWATERNKPRSYGHQAGVETVRRITSECVRLGVKYLTL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW RP EI+ L+ L+ + L+ + KNN++ RVIG+R L +++ L+E
Sbjct: 61 YTFSTENWNRPTDEIAALMGLVLTSLEDEIFM--KNNVRFRVIGDRERLPEEVQEKLRET 118
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCS---HDVDSSLIAKYLDTS 177
E T N + + +A +YS+R EI++A+K I + + + + L+ +++ T+
Sbjct: 119 EQHTEKNAAMTMVVALSYSARWEITQAMKEIVTEHQQENAVPLRPEMITEELLDRHMQTN 178
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+PDPDL+IRTGGE R+S++LLWQ+AYSE F YWPDFS A+ + R RRFG
Sbjct: 179 FMPDPDLLIRTGGELRISNYLLWQIAYSELYFCDTYWPDFSEHDLQKAITSFQSRQRRFG 238
Query: 238 GLSKK 242
K+
Sbjct: 239 KTEKQ 243
>gi|288800327|ref|ZP_06405785.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella sp. oral
taxon 299 str. F0039]
gi|288332540|gb|EFC71020.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella sp. oral
taxon 299 str. F0039]
Length = 248
Score = 208 bits (529), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 144/227 (63%), Gaps = 2/227 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA +G R GH+ G++ I + +G++ LT++ FS NW R
Sbjct: 12 PRHIAIIMDGNGRWATQKGKDRSYGHQAGVDTVRRITSECVSLGVEYLTLYTFSTENWNR 71
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E++ L+ L+ S L+ + KNN++ RVIG+ L + + L+E E T NT +
Sbjct: 72 PETEVAALMGLVLSSLEDEIF--MKNNVRFRVIGDMSRLPEAVQHKLRETELHTEKNTAM 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ +A +YSSR EI+ A K I ++SG + +D+ ++++ ++T +PDP+L+IRTGG
Sbjct: 130 TMVVALSYSSRWEITEATKRIATKVQSGEIAINDITEDMLSQNMETLFMPDPELLIRTGG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+R+S++LLWQ+AYSE F +WPDF+ E A+ Y R RRFG
Sbjct: 190 EQRISNYLLWQIAYSELYFCDTFWPDFNEEDLHKAIADYQSRQRRFG 236
>gi|225010446|ref|ZP_03700917.1| undecaprenyl diphosphate synthase [Flavobacteria bacterium
MS024-3C]
gi|225005275|gb|EEG43226.1| undecaprenyl diphosphate synthase [Flavobacteria bacterium
MS024-3C]
Length = 247
Score = 208 bits (529), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 98/232 (42%), Positives = 147/232 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA A+G+PR GH +G++ V +GIK LT++ FS NW R
Sbjct: 13 PKHLAIIMDGNGRWAKAKGMPRTFGHEQGVKTVRATVEHCVSLGIKYLTLYTFSTENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EI L+KL+ LKK + + NNI++ IG+ +L + L+E ++TR N+G+
Sbjct: 73 PKFEIDLLMKLLIRSLKKELKTFETNNIRLNAIGDLSALPKKAVQELEEVIEKTRNNSGM 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y SR+E+ +A+K I +++ + +D ++I +L T D+P+ DL++RT G
Sbjct: 133 TLSLALSYGSREELIQAVKAISVKVKNNIISPDIIDETIINTHLYTHDLPEVDLLVRTSG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AY+E FI WPDFS+ AL Y R+RRFG S++
Sbjct: 193 EHRISNFLLWQIAYAELYFISACWPDFSKAHLESALANYQNRERRFGKTSEQ 244
>gi|197105239|ref|YP_002130616.1| undecaprenyl diphosphate synthase [Phenylobacterium zucineum HLK1]
gi|196478659|gb|ACG78187.1| undecaprenyl diphosphate synthase [Phenylobacterium zucineum HLK1]
Length = 258
Score = 208 bits (529), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 98/229 (42%), Positives = 144/229 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I+MDGNGRWA RGLPR GHR+G+E V+AAAE I+ LT+F FS NW R
Sbjct: 21 PLHVAIVMDGNGRWAKRRGLPRTLGHREGVEALKRTVSAAAEQDIRWLTVFGFSTENWSR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E++EL+ L K + + L++ ++VRVIG R L +++ ++++AE +T N
Sbjct: 81 PAAEVAELMALPKRYFESDIGRLEREGVRVRVIGRRAGLSPELVRIIEDAETRTARNDRF 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IAFNY + +I+ A + +++ +G D+D + A +L T+ P PD+IIR G
Sbjct: 141 FLNIAFNYGGQADIADAARRFAEEVAAGRARPSDLDERVFASFLATAGSPPPDVIIRPSG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+RLS+FLLW+ AY+E VF WPD+ E AL + RDRR+G +
Sbjct: 201 EQRLSNFLLWEAAYAELVFQDVLWPDYGAEHLKAALAAFAARDRRYGAI 249
>gi|189345874|ref|YP_001942403.1| undecaprenyl diphosphate synthase [Chlorobium limicola DSM 245]
gi|189340021|gb|ACD89424.1| undecaprenyl diphosphate synthase [Chlorobium limicola DSM 245]
Length = 276
Score = 208 bits (529), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 146/232 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA +G R GH G++ ++V A ++GI LT+F FS NW+R
Sbjct: 34 PRHIAIIMDGNGRWARLKGKTRIEGHAGGVDSVRDVVEACTQLGIGYLTLFTFSTENWKR 93
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L+ L+K L NNI++ VIGN L + + VL+E + T+ N+ L
Sbjct: 94 PEKEVSALMQLLIKVLRKETRELHDNNIRLNVIGNINLLPEKVSDVLRETMELTKNNSRL 153
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA +YS + +I +A +++ D++SG + ++D L YL T +PDP+L+IRT G
Sbjct: 154 VLSIALSYSGKWDILQACRSMAFDVQSGHINPQNIDEQLFESYLSTRSLPDPELLIRTSG 213
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+F+LWQ AYSE F YWPDF R + A+ + R+RRFG S++
Sbjct: 214 EFRISNFMLWQSAYSEIYFTNTYWPDFRRAQLYDAIRDFQSRERRFGQTSEQ 265
>gi|326388634|ref|ZP_08210227.1| undecaprenyl pyrophosphate synthetase [Novosphingobium
nitrogenifigens DSM 19370]
gi|326206885|gb|EGD57709.1| undecaprenyl pyrophosphate synthetase [Novosphingobium
nitrogenifigens DSM 19370]
Length = 235
Score = 208 bits (529), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 102/228 (44%), Positives = 145/228 (63%), Gaps = 8/228 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R LPR GH++G+E V AA ++G+ +T++AFS NWRR
Sbjct: 15 PRHVAIIMDGNGRWAKRRHLPRVLGHQRGVEAVRRTVRAAVDLGLSAITLYAFSTENWRR 74
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L+K F+ +NNI+++VIG+ + DI+ +++ A +T NTGL
Sbjct: 75 PEDEVSALMGLLKHFILADIEEFARNNIRLKVIGDYKAFAPDIVALIEGALQRTAGNTGL 134
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ +A NY S+DEI RA + E + ++ IA LDT+D+P DLIIRT G
Sbjct: 135 TMAVALNYGSQDEIVRAARAAAAKGE--------ITTATIAAELDTADMPPLDLIIRTSG 186
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E RLS+FL+WQ AY+E +F+ WPDF R+ A+ +Y R+RRFGG
Sbjct: 187 EVRLSNFLMWQAAYAEMLFLDVLWPDFGRDHLEAAIAEYTRRERRFGG 234
>gi|257867710|ref|ZP_05647363.1| undecaprenyl pyrophosphate synthetase [Enterococcus casseliflavus
EC30]
gi|257874037|ref|ZP_05653690.1| undecaprenyl pyrophosphate synthetase [Enterococcus casseliflavus
EC10]
gi|257801793|gb|EEV30696.1| undecaprenyl pyrophosphate synthetase [Enterococcus casseliflavus
EC30]
gi|257808201|gb|EEV37023.1| undecaprenyl pyrophosphate synthetase [Enterococcus casseliflavus
EC10]
Length = 266
Score = 208 bits (529), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 102/236 (43%), Positives = 145/236 (61%), Gaps = 4/236 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH++G+E +I A+ +G+K LT++AFS NW+R
Sbjct: 27 PQHIAIIMDGNGRWAQNRRLPRVAGHKEGMETVKKITKHASHLGVKVLTLYAFSTENWKR 86
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L F L K N++V+V+G SL + +K A DQT+ NTG+
Sbjct: 87 PNEEVDFLMQLPVDFFDTFVPELIKENVQVKVMGFTESLPEHTQEAVKRAIDQTKDNTGM 146
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY SR EI A++ +++++ + + ++A +L T +P DP+L+I
Sbjct: 147 ILNFALNYGSRAEILTAVQALYEELAASEEALPKLTEDMLATHLMTGFLPNALRDPELVI 206
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE+R+S+FLLWQ+AYSE F WPDF L A+ + R+RRFGGL K
Sbjct: 207 RTSGEERISNFLLWQIAYSELFFTKALWPDFDAALLEDAIGSFQQRNRRFGGLKMK 262
>gi|315612427|ref|ZP_07887340.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sanguinis
ATCC 49296]
gi|315315408|gb|EFU63447.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sanguinis
ATCC 49296]
Length = 252
Score = 208 bits (529), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 138/233 (59%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA R PR GH+ G+E ++ AA ++G+K +T++AFS NW R
Sbjct: 20 PAHIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQKVTKAANKMGVKVITVYAFSTENWTR 79
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ ++ L F L NN+K+++IG L LK+AE+ T+ NTGL
Sbjct: 80 PDQEVKFIMNLPVEFYDNYVPELHANNVKIQMIGETNRLPKPTFEALKKAEELTKNNTGL 139
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI++A+K++ QD+ + D+ +I YL T +P DPDLII
Sbjct: 140 ILNFALNYGGRAEITQALKSLAQDVLDAKINPGDITEDMIGDYLFTQHLPKDLRDPDLII 199
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSE F WPDF A+ +N R+RRFGG+
Sbjct: 200 RTSGELRLSNFLPWQAAYSELYFTDTLWPDFDEAALQEAIAAFNHRNRRFGGV 252
>gi|148656146|ref|YP_001276351.1| undecaprenyl diphosphate synthase [Roseiflexus sp. RS-1]
gi|148568256|gb|ABQ90401.1| Undecaprenyl pyrophosphate synthetase [Roseiflexus sp. RS-1]
Length = 236
Score = 208 bits (529), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 102/232 (43%), Positives = 145/232 (62%), Gaps = 4/232 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGHR G E IV AE G++ LT++AFS NW R
Sbjct: 8 PRHIAIIMDGNGRWARQRHLPRLAGHRAGTENIRRIVTECAEQGVQYLTLYAFSTENWSR 67
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L++++ F+ + +L + ++R +G ++ ++ + +A + TR NT +
Sbjct: 68 PSAEVDGLMRILSDFIDRETINLHREGARLRHLGRLENISAELRQKILDAIELTRHNTRI 127
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +AFNY R +I A++ + + V DV ++I+ +L T +PDPDLIIRT G
Sbjct: 128 TLAVAFNYGGRADIVDAVRELI----ALGVKPEDVTEAVISDHLSTRGMPDPDLIIRTSG 183
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E RLS+FL+WQ AYSE+ P YWPDFS E A+ Y R+RRFGGLS++
Sbjct: 184 EWRLSNFLIWQAAYSEYWTTPVYWPDFSPEHLRQAIYDYGQRERRFGGLSEE 235
>gi|119356237|ref|YP_910881.1| undecaprenyl pyrophosphate synthetase [Chlorobium phaeobacteroides
DSM 266]
gi|119353586|gb|ABL64457.1| Undecaprenyl pyrophosphate synthetase [Chlorobium phaeobacteroides
DSM 266]
Length = 282
Score = 208 bits (529), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 103/232 (44%), Positives = 143/232 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA +G R GH G++ +IV A+ ++GI LT+F FS NW R
Sbjct: 40 PLHIAIIMDGNGRWAKLKGKTRIEGHIAGVDSVRDIVEASRQLGISYLTLFTFSTENWNR 99
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EIS L++L+ L+K +L NNI++ VIGN L + + VL E T N GL
Sbjct: 100 PEKEISALMRLLIKVLRKEARALHDNNIRLNVIGNTALLPEKVRTVLDETVVLTGHNNGL 159
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ IA +YS + +I A +++ ++++G V +D L L T+ +PDP+L+IRT G
Sbjct: 160 VMSIALSYSGKWDIVEACRSLAVEVKAGRVSPEMIDEHLFQSCLSTASIPDPELLIRTSG 219
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+F+LWQ AYSE F YWPDF R F+ AL Y R+RRFG S++
Sbjct: 220 EFRISNFMLWQSAYSEIYFTKTYWPDFRRAQFYAALRDYQNRERRFGQTSEQ 271
>gi|186476092|ref|YP_001857562.1| undecaprenyl diphosphate synthase [Burkholderia phymatum STM815]
gi|184192551|gb|ACC70516.1| undecaprenyl diphosphate synthase [Burkholderia phymatum STM815]
Length = 260
Score = 208 bits (529), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 103/236 (43%), Positives = 145/236 (61%), Gaps = 3/236 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S+ P HI IIMDGNGRWA R LPR AGH +G++ V A A G++ LT+FAFS N
Sbjct: 14 SAVPRHIAIIMDGNGRWATQRRLPRVAGHTRGVDAVRAAVEACARQGVEYLTLFAFSSEN 73
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+S L++L + L++ L N I++RV+G+ D I ++ AE +T N
Sbjct: 74 WRRPTDEVSFLMRLFVTALEREIGKLHANGIRLRVVGDLSMFDKKIQDLITRAETKTAKN 133
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
T L L IA NY R +I +A + + Q +++G ++ A++L + P+PDL I
Sbjct: 134 TRLTLTIAANYGGRWDIMQATRKLVEQSVQAGRPV--EISEEAFAEHLAMAYAPEPDLFI 191
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE+R+S+FLLWQ+AY+EF F YWPDF + A+ Y R+RRFG S +
Sbjct: 192 RTGGEQRISNFLLWQLAYTEFYFTDTYWPDFDADALGRAMASYTGRERRFGRTSAQ 247
>gi|29349134|ref|NP_812637.1| undecaprenyl pyrophosphate synthase [Bacteroides thetaiotaomicron
VPI-5482]
gi|253571297|ref|ZP_04848704.1| undecaprenyl pyrophosphate synthetase [Bacteroides sp. 1_1_6]
gi|42559810|sp|Q8A1E0|UPPS_BACTN RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|29341041|gb|AAO78831.1| undecaprenyl pyrophosphate synthetase [Bacteroides thetaiotaomicron
VPI-5482]
gi|251839250|gb|EES67334.1| undecaprenyl pyrophosphate synthetase [Bacteroides sp. 1_1_6]
Length = 244
Score = 208 bits (529), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 145/232 (62%), Gaps = 2/232 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA RG R GH+ G E ++I+ AA +G+K LT++ FS NW R
Sbjct: 13 PQHIAIIMDGNGRWAKQRGKERTYGHQAGAETVHKIIEDAARLGVKYLTLYTFSTENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L+ +++ +L KNNI+ R+IG+ L ++ L + T NTG
Sbjct: 73 PQEEVAALMNLLVDSIEEE--TLMKNNIRFRIIGDIKKLPAEVQEGLSRCIEHTANNTGT 130
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +YSSR E++ A++ I ++G + + I +L T+ +PDPDL+IRTGG
Sbjct: 131 CLVLALSYSSRWEMTEAVRQIATLAKTGEISPEQITDEYITAHLTTNFMPDPDLLIRTGG 190
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E RLS++LLWQ AYSE F +WPDF +E F A+ +Y R+RRFG S++
Sbjct: 191 EIRLSNYLLWQCAYSELYFCDTFWPDFDKEEFCKAIYEYQQRERRFGKTSEQ 242
>gi|288928939|ref|ZP_06422785.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella sp. oral
taxon 317 str. F0108]
gi|288329923|gb|EFC68508.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella sp. oral
taxon 317 str. F0108]
Length = 245
Score = 208 bits (529), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 144/227 (63%), Gaps = 2/227 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA RG R GH+ G++ I + +G+K LT++ FS NW R
Sbjct: 11 PRHIAIIMDGNGRWAKERGKERSYGHQAGVDTVRRITSECVRLGVKFLTLYTFSTENWSR 70
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +EI+ L+ L+ S L+ + KNN++ +V+G+ L + L+E + T NT +
Sbjct: 71 PETEIAALMGLVLSSLEDEIF--MKNNVRFQVVGDIQRLPQSVQDKLQETMEHTAQNTAM 128
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ +A +YSSR E++RA ++I +D+++G++ D+ L+ + L+T+ +PDP+L+IRTGG
Sbjct: 129 TMVVALSYSSRWELTRAAQSIARDVKAGTLQPEDITEELMNERLETAFMPDPELLIRTGG 188
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+++LWQ+AYSE F YWPDF A+ Y R RRFG
Sbjct: 189 ELRISNYMLWQIAYSELYFCDTYWPDFDEADLHQAIANYQARQRRFG 235
>gi|260886935|ref|ZP_05898198.1| di-trans,poly-cis-decaprenylcistransferase [Selenomonas sputigena
ATCC 35185]
gi|330839276|ref|YP_004413856.1| undecaprenyl diphosphate synthase [Selenomonas sputigena ATCC
35185]
gi|260862997|gb|EEX77497.1| di-trans,poly-cis-decaprenylcistransferase [Selenomonas sputigena
ATCC 35185]
gi|329747040|gb|AEC00397.1| undecaprenyl diphosphate synthase [Selenomonas sputigena ATCC
35185]
Length = 258
Score = 208 bits (529), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 93/235 (39%), Positives = 146/235 (62%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P H+ +IMDGNGRWA +G R GHR G++ ++I+ A ++ ++ LT++AFS N
Sbjct: 24 SRLPRHVAVIMDGNGRWAKGQGFLRTVGHRAGVDTLHDILDTAIDLKLEVLTVYAFSTEN 83
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W+RP E+ L++L +L K + + N+++R IG L +++ ++ AE+ + N
Sbjct: 84 WKRPHDEVDFLMRLFSEYLDKEEREMHEKNVRIRFIGRVDELTPELIRRVRHAEELMKNN 143
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
TG++ +A NY +DEI RA++ + +++G + ++ L LDT ++P DL+IR
Sbjct: 144 TGVHFCVAVNYGGQDEICRAVQGLAGKVQAGELSPEEITPELFQASLDTKELPPVDLVIR 203
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
T G+ RLS+FLLWQ AY+EF F WPDF E F AL Y R+RRFGG+ +K
Sbjct: 204 TSGDMRLSNFLLWQAAYAEFWFTETNWPDFKPECFMEALRDYASRERRFGGIKEK 258
>gi|284039283|ref|YP_003389213.1| undecaprenyl diphosphate synthase [Spirosoma linguale DSM 74]
gi|283818576|gb|ADB40414.1| undecaprenyl diphosphate synthase [Spirosoma linguale DSM 74]
Length = 245
Score = 208 bits (529), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 97/235 (41%), Positives = 141/235 (60%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S+ P HI +IMDGNGRWA +GL R GH I+ E+ AE+G+K LT++AFS N
Sbjct: 8 SNLPQHIAVIMDGNGRWAKRQGLARVFGHNSAIKAVREVTEGCAELGVKYLTLYAFSTEN 67
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP E+ L+ L+ ++ +L NN+++ IG+ SL D L EA +T N
Sbjct: 68 WNRPKYEVDALMTLLVRTIRGEIKTLMDNNVRLATIGHTESLPGDCQRELAEAMRETSQN 127
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
TGL L +A +YS R EI A + + D+ G + +D + ++L T +PDP+L+IR
Sbjct: 128 TGLTLVLALSYSGRWEILEAARQLAADVRDGKLTPDQIDETTFGQHLSTKGIPDPELMIR 187
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
T GE R+S+F+LWQ+AYSE WPDF +E ++A+ Y R+RRFG S++
Sbjct: 188 TSGEMRISNFMLWQLAYSELYMPDVLWPDFRKEHLYNAIVSYQQRERRFGKTSEQ 242
>gi|319779548|ref|YP_004130461.1| Undecaprenyl pyrophosphate synthetase [Taylorella equigenitalis
MCE9]
gi|317109572|gb|ADU92318.1| Undecaprenyl pyrophosphate synthetase [Taylorella equigenitalis
MCE9]
Length = 248
Score = 207 bits (528), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 105/232 (45%), Positives = 141/232 (60%), Gaps = 1/232 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA + LPR +GH KG++ V GI LT++AFS NWRR
Sbjct: 17 PKHIAIIMDGNGRWATKKNLPRTSGHIKGVQAVRNAVEFCIRNGISYLTVYAFSSENWRR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE++ L+KL K L K L KNNI+V ++G+R S +D+ ++ AED T+ N+ L
Sbjct: 77 PASEVALLMKLFKKVLTKEIVKLHKNNIRVCIVGDRSSFSEDLQKLMDSAEDLTKNNSAL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ I NY R +I AI + ++ + S S + A Y+ SD+P+PDL IRTGG
Sbjct: 137 CVNICANYGGRWDILNAINELIKN-NNYSFSSIPIKEEDFAPYISLSDIPEPDLCIRTGG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+RLS+FLLWQ AYSE F ++WPD F AL + R+RRFG S +
Sbjct: 196 EQRLSNFLLWQTAYSELYFTNKFWPDMKLADFEDALKAFQARERRFGMTSDQ 247
>gi|295105053|emb|CBL02597.1| Undecaprenyl pyrophosphate synthetase [Faecalibacterium prausnitzii
SL3/3]
Length = 237
Score = 207 bits (528), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 97/226 (42%), Positives = 142/226 (62%), Gaps = 1/226 (0%)
Query: 14 IGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVS 73
IGIIMDGNGRWA RGLPR AGH+KG VF +I E+G+ ++ +AFS NW+RP+
Sbjct: 13 IGIIMDGNGRWAKNRGLPRTAGHKKGAAVFKDIANYCDELGVASVYFYAFSTENWKRPLE 72
Query: 74 EISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLF 133
E+ ++KL +L +GF K NI+++ +G+R +LD + ++ E E + TG+ L
Sbjct: 73 EVGAIMKLFAQYLIEGF-DYKNRNIRIKFLGDRTALDPKLQKMMNELEGDSACKTGMTLN 131
Query: 134 IAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKR 193
IA NY R EI RA + + +G + D++ +++ + T+ DPD I+R GEKR
Sbjct: 132 IAINYGGRPEIVRAAQQLAAKAVAGEIRPEDINEQMMSDAMYTAGQKDPDFILRPSGEKR 191
Query: 194 LSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
LS+F+LWQ AYSE V + WPDF+R A+ ++N R RRFGG+
Sbjct: 192 LSNFMLWQAAYSELVEMDVLWPDFTRADLDTAIEEFNHRSRRFGGI 237
>gi|303232719|ref|ZP_07319404.1| di-trans,poly-cis-decaprenylcistransferase [Atopobium vaginae
PB189-T1-4]
gi|302481205|gb|EFL44280.1| di-trans,poly-cis-decaprenylcistransferase [Atopobium vaginae
PB189-T1-4]
Length = 266
Score = 207 bits (528), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 97/229 (42%), Positives = 138/229 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA ARG R GH+ G+ E V + +GI L+++AFS NW+R
Sbjct: 38 PKHVSIIMDGNGRWAQARGKDRSQGHKAGVAALREAVTTSVRLGIDVLSVYAFSTENWKR 97
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E++ L+ L + L + + N+++ IG+ L V + ++T+ NTG+
Sbjct: 98 PQAEVNLLMHLFATTLVRELPLFHQENVRLMFIGDLTQLPQATQDVFAQGLEETKHNTGM 157
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY SR EI+RA+K + + G++ D+ IA L T+ +PDPDL+IRT G
Sbjct: 158 VFALAVNYGSRSEITRALKLCCKQVHDGTLAIDDITEDTIASRLYTAQLPDPDLLIRTSG 217
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS++LLWQ+AYSE P WPDFSR + A+ Y R RRFGGL
Sbjct: 218 EMRLSNYLLWQLAYSELYVTPVLWPDFSRWDYLRAVIAYQTRTRRFGGL 266
>gi|322374999|ref|ZP_08049513.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sp. C300]
gi|321280499|gb|EFX57538.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sp. C300]
Length = 252
Score = 207 bits (528), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 137/233 (58%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA R PR GH+ G+E ++ AA ++G+K +T++AFS NW R
Sbjct: 20 PAHIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQKVTKAANKMGVKVITVYAFSTENWTR 79
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ ++ L F L NN+K+++IG L LK+AE+ T+ NTGL
Sbjct: 80 PDQEVKFIMNLPVEFYDNYVPELHANNVKIQMIGETDRLPKQTFEALKKAEELTKNNTGL 139
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI++A+K + QD+ + D+ +I YL T +P DPDLII
Sbjct: 140 ILNFALNYGGRAEITQALKGLAQDVLDAKINPGDITEDMIGDYLFTQHLPKDLRDPDLII 199
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSE F WPDF A+ +N R+RRFGG+
Sbjct: 200 RTSGELRLSNFLPWQAAYSELYFTDTLWPDFDEAALQEAIAAFNHRNRRFGGV 252
>gi|297617175|ref|YP_003702334.1| undecaprenyl diphosphate synthase [Syntrophothermus lipocalidus DSM
12680]
gi|297145012|gb|ADI01769.1| undecaprenyl diphosphate synthase [Syntrophothermus lipocalidus DSM
12680]
Length = 249
Score = 207 bits (528), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 100/231 (43%), Positives = 140/231 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R PR GHR G+E V A +E+G+ LT++AFS NW+R
Sbjct: 15 PQHIAIIMDGNGRWARKRLRPRSFGHRAGMESLKRTVEACSELGVHILTVYAFSTENWKR 74
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L+ +L + +L + N+ + +IG LD I L+ A + T N GL
Sbjct: 75 PAEEVSALMNLLLEYLNRELENLHEKNVCITIIGITDQLDPAIQRELQRAVELTAGNDGL 134
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L I NY +R E+ A + + + + G + D+ +++ YL TS +PDPDL+IRTGG
Sbjct: 135 ILNIGLNYGARAELVMAARRLAERVRDGEIDVADISEEMMSSYLCTSHLPDPDLLIRTGG 194
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E RLS+FLLWQ AY+E F WPDF+++ A+ Y RDRRFG + +
Sbjct: 195 EMRLSNFLLWQAAYAELWFTDTLWPDFTKDDLVKAIIDYQRRDRRFGTIKE 245
>gi|300114872|ref|YP_003761447.1| undecaprenyl diphosphate synthase [Nitrosococcus watsonii C-113]
gi|299540809|gb|ADJ29126.1| undecaprenyl diphosphate synthase [Nitrosococcus watsonii C-113]
Length = 252
Score = 207 bits (528), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 94/232 (40%), Positives = 143/232 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R PR GHR G+E ++ A A+ GI+ LT+FAFS NWRR
Sbjct: 14 PRHVAIIMDGNGRWAKQRNRPRFYGHRAGVEAVEGVLRACADTGIRVLTLFAFSSENWRR 73
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L+ S + +++ N+ +R+IG+R + + + +AE T N G+
Sbjct: 74 PSQEVQLLMELLASAVSNRLQQIQEQNVCLRIIGDRSRFPEALQAEMAKAEALTAQNDGI 133
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY R +I++A + + +E G + + + A +L + +P+PDL IRTGG
Sbjct: 134 TLVVAANYGGRWDITQAARQVAAKVEDGQIAVDSITPEVFAAHLSLAGLPEPDLFIRTGG 193
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FLLWQ+AY+EF F WPDF+ F A+ + R+RRFG S++
Sbjct: 194 EQRVSNFLLWQLAYTEFYFTDILWPDFNEAAFATAIKTFVRRERRFGQTSEQ 245
>gi|307126478|ref|YP_003878509.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae 670-6B]
gi|306483540|gb|ADM90409.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae 670-6B]
Length = 252
Score = 207 bits (528), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 106/238 (44%), Positives = 137/238 (57%), Gaps = 4/238 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ + P HIGIIMDGNGRWA R PR GH+ G+E + AA ++G+K +T++AFS
Sbjct: 15 VPTQVPAHIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQTVTKAANKLGVKVITVYAFST 74
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RPV E+ ++ L F L NN+K+++IG L L +AE+ T+
Sbjct: 75 ENWTRPVQEVKFIMNLPVEFYDNYVPELHANNVKIQMIGETDRLPKQTFEALTKAEELTK 134
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----D 181
NTGL L A NY R EI++A+K I QD+ + D+ LI YL T +P D
Sbjct: 135 NNTGLILNFALNYGGRAEITQALKLISQDVLDAKINPGDITEELIGNYLFTQHLPKDLRD 194
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDLIIRT GE RLS+FL WQ AYSE F WPDF A+ YN R RRFGG+
Sbjct: 195 PDLIIRTSGELRLSNFLPWQGAYSELYFTDTLWPDFDEAALQEAILAYNRRHRRFGGV 252
>gi|329889360|ref|ZP_08267703.1| di-trans,poly-cis-decaprenylcistransferase [Brevundimonas diminuta
ATCC 11568]
gi|328844661|gb|EGF94225.1| di-trans,poly-cis-decaprenylcistransferase [Brevundimonas diminuta
ATCC 11568]
Length = 252
Score = 207 bits (528), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 97/241 (40%), Positives = 143/241 (59%), Gaps = 5/241 (2%)
Query: 1 MVASMMSSSP---PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKN 57
M A ++++P P H+ +IMDGNGRWA RGLPR GHR+G++ + AA E+G++
Sbjct: 1 MSAEPVATAPAKGPRHVALIMDGNGRWAQRRGLPRAVGHREGVQALRRTIKAAPELGVRC 60
Query: 58 LTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
LT+F FS NW RP E+S+L+ L+++F+ L ++V+V+G R L DDI ++
Sbjct: 61 LTVFGFSTENWSRPADEVSDLMGLVRAFVGSDLKRLAAAGVRVKVLGRRKGLPDDIAAIV 120
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
AE +T N L +AFNY R ++ A + + +G VD + L T+
Sbjct: 121 ARAEAETADNDKFLLQVAFNYGGRADLVDAAQRLADRARAGEDVV--VDEEALGAGLSTA 178
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
P DLI+RT GE+RLS+FLLW+ AY+E VF WPD+ E A+ Q+ R+RR+G
Sbjct: 179 GAPPVDLIVRTSGEQRLSNFLLWEAAYAEMVFQEILWPDYGAEALAEAIAQFGCRERRYG 238
Query: 238 G 238
G
Sbjct: 239 G 239
>gi|28899088|ref|NP_798693.1| undecaprenyl diphosphate synthase [Vibrio parahaemolyticus RIMD
2210633]
gi|260362404|ref|ZP_05775359.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio parahaemolyticus
K5030]
gi|260876830|ref|ZP_05889185.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio parahaemolyticus
AN-5034]
gi|260897262|ref|ZP_05905758.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio parahaemolyticus
Peru-466]
gi|42559962|sp|Q87ME1|UPPS_VIBPA RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|28807312|dbj|BAC60577.1| undecaprenyl diphosphate synthase [Vibrio parahaemolyticus RIMD
2210633]
gi|308085347|gb|EFO35042.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio parahaemolyticus
Peru-466]
gi|308091421|gb|EFO41116.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio parahaemolyticus
AN-5034]
gi|308113981|gb|EFO51521.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio parahaemolyticus
K5030]
gi|328474375|gb|EGF45180.1| undecaprenyl pyrophosphate synthase [Vibrio parahaemolyticus 10329]
Length = 251
Score = 207 bits (528), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 100/231 (43%), Positives = 149/231 (64%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S S P HI IIMDGNGRWA ++G PR GH+KG+ + VAAA+++GIK +T+FAFS
Sbjct: 8 SDSLPKHIAIIMDGNGRWAKSKGKPRVFGHKKGVNAVRKTVAAASKLGIKAMTLFAFSSE 67
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+ L++L + L L KNN+++RVIG+ + + + EAE+ T
Sbjct: 68 NWRRPEEEVGLLMELFITVLSSEVKKLHKNNLQLRVIGDTSRFSERLQKKIVEAENLTAS 127
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTG+ + IA NY + +I+ A K + +G + D++ LI ++L +D+P+ DL+I
Sbjct: 128 NTGMVINIAANYGGKWDITEAAKALALKARNGEIRVEDINEQLITEHLTMADLPEVDLLI 187
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE R+S+F+LWQ+AY+E F PE+WP+F + A+ + R+RRFG
Sbjct: 188 RTSGECRISNFMLWQMAYAEMYFTPEFWPEFDEDSLVEAVTWFINRERRFG 238
>gi|227872427|ref|ZP_03990771.1| undecaprenyl diphosphate synthase [Oribacterium sinus F0268]
gi|227841724|gb|EEJ52010.1| undecaprenyl diphosphate synthase [Oribacterium sinus F0268]
Length = 245
Score = 207 bits (528), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 101/233 (43%), Positives = 141/233 (60%), Gaps = 4/233 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P HI II+DGNGRWAA+ LPR GH+KG E + V A +GI+ LT++ FS NW
Sbjct: 11 SLPRHIAIILDGNGRWAASHALPRALGHKKGCETLEQTVEDCARLGIEYLTVYGFSTENW 70
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+R E+ L++L + ++KK NN++ ++IG R +DI + E E+ T+ NT
Sbjct: 71 KRSEEEVGALMQLFRFYMKKLITVANANNVRAKMIGERSRFPEDIQKGISELEESTKANT 130
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVC---SHDVDSSLIAKYLDTSDVPDPDLI 185
G+ A NY RDE+ RAI+ I + + + SH + + YLDT+ PDPDL+
Sbjct: 131 GMLFSFAVNYGGRDEMIRAIRKIALESDPSELSEKLSHLTEEEF-SNYLDTAGTPDPDLV 189
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
IRT GE R S+FLLWQ AY+E+ YWPDF+ E A++ Y R+RRFGG
Sbjct: 190 IRTSGEFRTSNFLLWQSAYAEYYISSVYWPDFNLEELKKAISSYQNRERRFGG 242
>gi|42559824|sp|Q8GDY3|UPPS_HELMO RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|27262324|gb|AAN87443.1| Undecaprenyl pyrophosphate synthetase [Heliobacillus mobilis]
Length = 260
Score = 207 bits (528), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 102/229 (44%), Positives = 136/229 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA RGLPR AGHR G+E ++ + I LT++AFS NW+R
Sbjct: 30 PKHIAIIMDGNGRWAKRRGLPRVAGHRAGVESLRRVLEVCEDYNIAYLTVYAFSTENWKR 89
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L L+ +L + +L +++R IG L L++A +T NT L
Sbjct: 90 PADEVNALFDLLVEYLHRELNTLHSKGVRIRAIGKIEDLPGGPRRELEKAIAKTANNTRL 149
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY R EI A+K+I + G V +D +++YL T+DVPDPDL+IR G
Sbjct: 150 VLNVALNYGGRFEIVEAVKSIARLAAEGKVNPDQIDEKYMSQYLYTADVPDPDLLIRPSG 209
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+FLLWQ AY+E P WPDF R+ A+ Y RDRRFGG+
Sbjct: 210 ELRLSNFLLWQSAYTEIWVTPTLWPDFGRKEMVQAIVDYQGRDRRFGGV 258
>gi|315282162|ref|ZP_07870630.1| di-trans,poly-cis-decaprenylcistransferase [Listeria marthii FSL
S4-120]
gi|313614194|gb|EFR87870.1| di-trans,poly-cis-decaprenylcistransferase [Listeria marthii FSL
S4-120]
Length = 253
Score = 207 bits (528), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 103/229 (44%), Positives = 140/229 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R LPR AGH++G++V + A +GI LT++AFS NW+R
Sbjct: 25 PRHVAIIMDGNGRWAKKRFLPRIAGHKEGMDVVKRVTRYANAIGIDVLTLYAFSTENWKR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL F L + N++V V+G R +L D + +++A T TGL
Sbjct: 85 PTDEVDFLMKLPVEFFDSFVPELIEENVRVNVMGYRENLPDHTMRAVEKAIADTAHCTGL 144
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY R EI A K +++ S D+ L+ +L +S + DPDL+IRT G
Sbjct: 145 TLNFALNYGGRSEIITAAKEAMKELAREGKSSEDLTEELLNDHLMSSGLGDPDLLIRTSG 204
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+F+LWQ+AYSEF F +WPDFS+E F A+ +Y R RRFGGL
Sbjct: 205 ELRLSNFMLWQLAYSEFYFTETHWPDFSKEDFLQAIIEYQNRSRRFGGL 253
>gi|92112700|ref|YP_572628.1| undecaprenyl pyrophosphate synthetase [Chromohalobacter salexigens
DSM 3043]
gi|91795790|gb|ABE57929.1| Undecaprenyl pyrophosphate synthetase [Chromohalobacter salexigens
DSM 3043]
Length = 252
Score = 207 bits (528), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 102/227 (44%), Positives = 136/227 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGN RWA A GL GHR G+E ++ AAE GI LT+FAFS NW+R
Sbjct: 15 PRHVAVIMDGNNRWARAHGLSGIRGHRAGVEAVRAVIGRAAERGIGTLTLFAFSSENWKR 74
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE+S L++L LK+ L ++I++ VIG+R D I + AE TR N GL
Sbjct: 75 PASEVSALMELFLWALKREVKKLHAHDIRLTVIGDRAEFSDAIQQYIARAEALTRDNRGL 134
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L IA NY R +I+ A + + + + G + VD + + +D DL IRT G
Sbjct: 135 HLVIAANYGGRWDIAHAARRLAERVACGELSPEAVDEESLGAEVSLADEAPVDLCIRTSG 194
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+R+S+FLLWQ+AY+EF F PE WPDF E F AL+ Y R RRFG
Sbjct: 195 EQRISNFLLWQLAYAEFYFTPELWPDFGAEAFDAALDAYGARQRRFG 241
>gi|295396950|ref|ZP_06807072.1| di-trans,poly-cis-decaprenylcistransferase [Aerococcus viridans
ATCC 11563]
gi|294974803|gb|EFG50508.1| di-trans,poly-cis-decaprenylcistransferase [Aerococcus viridans
ATCC 11563]
Length = 248
Score = 207 bits (528), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 102/235 (43%), Positives = 149/235 (63%), Gaps = 3/235 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI +IMDGNGRWA ARGL R GH +G++ +V AA ++G+K LT +AFS NW+R
Sbjct: 14 PNHIAVIMDGNGRWAQARGLKRTDGHSEGLKALKRVVIAAHKMGVKVLTAYAFSTENWKR 73
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P++E++ L+ L K + L NN++VR+ GN + ++ A D+T+ NTGL
Sbjct: 74 PITEVNYLMGLPKVLNDEILPDLIDNNVQVRMSGNFDKVPLGTKKYIQNAMDRTKDNTGL 133
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV---PDPDLIIR 187
L IAFNY SRDEI++A++NI + +G + D+ I+ L T+ + DPDL+IR
Sbjct: 134 ILNIAFNYGSRDEITKAVQNIATSVANGDLKVKDISEDTISDNLYTAQLGEYADPDLLIR 193
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+ GE RLS++LLWQ+AYSE VF WPDF + + ++ R+RRFG + K
Sbjct: 194 SSGEVRLSNYLLWQLAYSEMVFTDTKWPDFDEAIMQECVGEFQRRNRRFGAIDTK 248
>gi|222100167|ref|YP_002534735.1| Undecaprenyl pyrophosphate synthetase [Thermotoga neapolitana DSM
4359]
gi|221572557|gb|ACM23369.1| Undecaprenyl pyrophosphate synthetase [Thermotoga neapolitana DSM
4359]
Length = 233
Score = 207 bits (528), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 138/229 (60%), Gaps = 2/229 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RGLPR GH +G V + V + E+GIK LT ++FS NW+R
Sbjct: 4 PQHVAIIMDGNGRWAKKRGLPRIKGHERGAHVLHNTVKWSLELGIKYLTAYSFSTENWKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L + + L++ ++VR++G + L + +L E E++T +
Sbjct: 64 PKEEVEFLMNLFVQMIDREMDLLRREKVRVRILGRKEGLPESVLRKWNEVEEKTNSFDRM 123
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IAFNY R EI A++ I +D+E ++ YL DVPDPDLIIRT G
Sbjct: 124 TLVIAFNYGGRREILDAVERILRDVEKEKKIV--LNEETFKSYLYLPDVPDPDLIIRTSG 181
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+FL+WQ AYSE F + WPDF++ F A+ Y+ R+RRFGGL
Sbjct: 182 ELRLSNFLIWQSAYSELYFTRKLWPDFTKRDFLRAIESYSRRERRFGGL 230
>gi|169830794|ref|YP_001716776.1| undecaprenyl diphosphate synthase [Candidatus Desulforudis
audaxviator MP104C]
gi|169637638|gb|ACA59144.1| undecaprenyl diphosphate synthase [Candidatus Desulforudis
audaxviator MP104C]
Length = 252
Score = 207 bits (528), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 97/230 (42%), Positives = 140/230 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA RGLPR AGHR G E E+V +AE+G++ LT + FS NW+R
Sbjct: 22 PAHVAVIMDGNGRWAQKRGLPRAAGHRAGAEALREVVRFSAELGVRFLTAYTFSTENWKR 81
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L+ L+ ++ K + + +R IG L D L EA +TR N+ +
Sbjct: 82 PRAEVDGLMSLLVEYVYKELEEMHSQGVCLRTIGRPEELPPDAREALAEAVARTRDNSRI 141
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ +A NY R E+ A++ + +I SG + D+D + L T+ +PDPDL+IR G
Sbjct: 142 VVNLALNYGGRRELVDAVRRLGVEIRSGRLNPGDIDEETVQSALYTAGIPDPDLLIRPAG 201
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E R+S+F+LWQ+AY+EF P WPDF R AL ++ RDRR+GGL+
Sbjct: 202 EFRISNFMLWQLAYTEFWVTPVLWPDFGRIHLAQALLEFQRRDRRYGGLN 251
>gi|229815411|ref|ZP_04445743.1| hypothetical protein COLINT_02459 [Collinsella intestinalis DSM
13280]
gi|229808944|gb|EEP44714.1| hypothetical protein COLINT_02459 [Collinsella intestinalis DSM
13280]
Length = 261
Score = 207 bits (527), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 97/240 (40%), Positives = 146/240 (60%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+A + + P HI IMDGNGRWA +RGL R GH+ GI +++ A +G+ L+ +
Sbjct: 21 IADIDMARIPRHISCIMDGNGRWATSRGLGRGEGHKAGIVALQDVITACVRMGVDVLSAY 80
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP +E+ L+ L LK+ N++V +G+ +L V +
Sbjct: 81 AFSTENWNRPQAEVDLLMYLFAKTFVDELPLLKRENVRVEFLGDISALPKKTRDVFERGL 140
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+TR +TG+ L +A NY R EI+RA+++I + + +G + +D +L+A +L T+ +PD
Sbjct: 141 AETRDHTGMTLALAVNYGGRAEITRAVRHIAEAVSTGDIAVEQIDDALVADHLYTAGLPD 200
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
P+L+IRT GE R+S++LLWQ+AYSEF YWPDF R A+ + RDRRFGGLS+
Sbjct: 201 PELVIRTSGELRVSNYLLWQIAYSEFYITDTYWPDFDRWGLVRAIASFQGRDRRFGGLSQ 260
>gi|88801352|ref|ZP_01116880.1| Undecaprenyl pyrophosphate synthase [Polaribacter irgensii 23-P]
gi|88782010|gb|EAR13187.1| Undecaprenyl pyrophosphate synthase [Polaribacter irgensii 23-P]
Length = 247
Score = 207 bits (527), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 98/232 (42%), Positives = 146/232 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA +G+ R GHR + E V AA++G++ +T++AFS NW+R
Sbjct: 13 PKHIAIIMDGNGRWAKGKGMSRVFGHRHALTAVRESVETAAQIGVQAITLYAFSTENWKR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L+ + LKK + +KN + V IGN +L LKE T+ N+ +
Sbjct: 73 PKLEVDALMQLLVNSLKKELPTFQKNEVLVNAIGNIDNLPSKAQKALKEVIALTKANSKI 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y SR+EI +AI+NI + + +C +++ I +L T ++PD DL+IRT G
Sbjct: 133 ILTLALSYGSREEIVKAIQNISKKVVKKELCIKEINEKTINNHLYTFNLPDVDLMIRTSG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AY+E F WPDF +E F+ A+ Y R+RRFG S++
Sbjct: 193 EHRISNFLLWQMAYAELYFTDVLWPDFRKEHFYDAIIDYQNRERRFGKTSEQ 244
>gi|313159537|gb|EFR58900.1| di-trans,poly-cis-decaprenylcistransferase [Alistipes sp. HGB5]
Length = 241
Score = 207 bits (527), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 99/227 (43%), Positives = 135/227 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG R GH G+E + AAA G+K LT++AFS NW R
Sbjct: 12 PQHVAIIMDGNGRWAELRGKERYEGHVAGVEPVRASLRAAARWGVKYLTLYAFSTENWGR 71
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L + L + +++R+IG+R + + L EAE +T L
Sbjct: 72 PAQEVDALMELFCKSVVNETPELIRQGVEIRMIGDRTRFSEKVQRYLAEAEQRTAGGKTL 131
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NYSSR EI+RA++ I SG + ++ I+ LDT+ P+PDLI+RT G
Sbjct: 132 TLILALNYSSRSEITRAVRQIAARAASGELAPEEISEGTISAALDTAPYPNPDLIVRTSG 191
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E RLS+FLLWQ +Y+E F WPDF+ E F A+ +Y RDRRFG
Sbjct: 192 EHRLSNFLLWQASYAELYFPEVLWPDFTEEEFDRAMEEYARRDRRFG 238
>gi|313885283|ref|ZP_07819034.1| di-trans,poly-cis-decaprenylcistransferase [Eremococcus coleocola
ACS-139-V-Col8]
gi|312619389|gb|EFR30827.1| di-trans,poly-cis-decaprenylcistransferase [Eremococcus coleocola
ACS-139-V-Col8]
Length = 241
Score = 207 bits (527), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 100/230 (43%), Positives = 144/230 (62%), Gaps = 3/230 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA R LPR AGH +G + ++ A ++GIK L+++AFS NW R
Sbjct: 9 PNHVAIIMDGNGRWAKKRLLPRVAGHHQGAQTIKKVAKRANQLGIKVLSLYAFSTENWGR 68
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L K F K L + +K+ V+G+ +L +++ A DQT+ NTGL
Sbjct: 69 PEKEVKFLMDLPKEFFKTYLPELMEEGVKLEVMGDLSTLPSATREIIETALDQTKHNTGL 128
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV---PDPDLIIR 187
L NY R EI++A++ I Q+I++G + + VD + I ++L ++ + PDL+IR
Sbjct: 129 ILNFLINYGGRQEITKAMQAIGQEIQAGRIQADQVDETYIEQHLMSAKLGAYAQPDLMIR 188
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
T GE+RLS+FLLWQVAYSEF F WPDF E A+ +Y R RR+G
Sbjct: 189 TSGEERLSNFLLWQVAYSEFYFTNTLWPDFDAEALDLAIQEYGQRQRRYG 238
>gi|302335683|ref|YP_003800890.1| Undecaprenyl pyrophosphate synthetase [Olsenella uli DSM 7084]
gi|301319523|gb|ADK68010.1| Undecaprenyl pyrophosphate synthetase [Olsenella uli DSM 7084]
Length = 261
Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 95/231 (41%), Positives = 145/231 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA ARGL R GH G++ E V + +G+ L+++AFS NW+R
Sbjct: 30 PRHVSIIMDGNGRWAKARGLDRSEGHVAGVDSLREAVTTSVRLGVDVLSVYAFSTENWKR 89
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L + L + + ++++R +G+ +L + V + D+T +TG+
Sbjct: 90 PRREVNLLMHLFATTLMQELPLFFQEDVRLRFLGDLEALPRETRDVFQRGLDETAGHTGM 149
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY SR E+ RA I +++++GS+ D+D ++ L +S +PDPDL+IRT G
Sbjct: 150 TFALAVNYGSRAELVRATCQIAREVQAGSLAVEDIDEECVSSRLYSSGLPDPDLLIRTSG 209
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E RLS++LLWQ+AY+EF YWPDFSR + A+ Y RDRRFGG+ +
Sbjct: 210 ELRLSNYLLWQLAYTEFYVTDTYWPDFSRWDYLRAIRSYQRRDRRFGGVRQ 260
>gi|237756527|ref|ZP_04585055.1| undecaprenyl pyrophosphate synthetase 1 [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237691313|gb|EEP60393.1| undecaprenyl pyrophosphate synthetase 1 [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 231
Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 142/227 (62%), Gaps = 6/227 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA RGL R GHR+G++ + A +VGIK +T+FAFS NW+R
Sbjct: 9 PEHVAIIMDGNGRWAKMRGLDRVYGHREGVKTVERTIKFAKKVGIKYITLFAFSTENWQR 68
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P+ E++ +++L+ ++ + LK+N+IK+ +G + L D +L +K+AED+T+ + L
Sbjct: 69 PIEEVNAIMQLLVEYIHEKLPFLKENDIKLLFMGRKEGLWDSVLEAMKKAEDETKNCSSL 128
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ I NYS + EI A+ I + +D YL ++PDPDL+IRT G
Sbjct: 129 IVIIGLNYSGKAEIVDAVNKILKS------NVEKIDEESFRNYLYLPEIPDPDLLIRTSG 182
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
EKR+S+F+LWQ+AY+E F WPDF E F AL Y RDRRFG
Sbjct: 183 EKRISNFILWQLAYTELYFTDVLWPDFDEEEFLKALYDYQSRDRRFG 229
>gi|296115045|ref|ZP_06833687.1| undecaprenyl pyrophosphate synthetase [Gluconacetobacter hansenii
ATCC 23769]
gi|295978382|gb|EFG85118.1| undecaprenyl pyrophosphate synthetase [Gluconacetobacter hansenii
ATCC 23769]
Length = 244
Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 95/232 (40%), Positives = 141/232 (60%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ S P H+ IIMDGNGRWAA+RGLP AGHR G E + AA G+K LT++AFS
Sbjct: 10 AGSVPVHVAIIMDGNGRWAASRGLPLLAGHRAGAEAVQRCIRAAVASGVKWLTLYAFSSE 69
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRR E+++L L++ +L+ L +++R+IG+ D+ + AE +T
Sbjct: 70 NWRRTPQEVADLTSLLRYYLRYKVAELAAKGVRIRIIGDLSRFAPDVRAEARRAELETAS 129
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NT L + +A +Y R +I +A + + ++ G++ +D + +L T+D+PDPD+++
Sbjct: 130 NTVLTVVLALSYGGRADIMQAALRMAKAVQDGTLAPGQIDEDVFGGFLMTADMPDPDIVV 189
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
RT GE RLS+FLLWQ AY+E +FI WPDF F L Y+ R+RRFG
Sbjct: 190 RTSGESRLSNFLLWQSAYAELIFIETLWPDFDAGHFDAVLQIYSRRERRFGA 241
>gi|119774280|ref|YP_927020.1| di-trans,poly-cis-decaprenylcistransferase [Shewanella amazonensis
SB2B]
gi|119766780|gb|ABL99350.1| Undecaprenyl pyrophosphate synthetase [Shewanella amazonensis SB2B]
Length = 266
Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 97/236 (41%), Positives = 150/236 (63%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
V+ +++ S P H+ IIMDGNGRWA A+G PR GH+ G++ V+ A+++GIK+LT+F
Sbjct: 20 VSGLVNQSLPQHVAIIMDGNGRWAQAQGKPRVMGHKAGVKAVRRAVSTASQLGIKSLTLF 79
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP +E+S L++L + LK+ L KN +++ +IG+ D + +++AE
Sbjct: 80 AFSSENWRRPDAEVSLLMELFFTVLKREIKLLSKNGVRLNIIGDTSRFSDRLQQQIRDAE 139
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T NTGL L +A NY R +I +A + + Q + SG + S ++++L +
Sbjct: 140 EKTAANTGLILNVAANYGGRWDILQAAQQLAQKLASGEIDSSQFTEEALSQHLCMQSQGE 199
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRTGG+ R+S+F+LWQ AY+E VF WPDF + F A+ + R RRFG
Sbjct: 200 VDLMIRTGGDYRISNFVLWQAAYAELVFTDTLWPDFDEQCFKEAIALFASRQRRFG 255
>gi|306828822|ref|ZP_07462014.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus mitis
ATCC 6249]
gi|304429000|gb|EFM32088.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus mitis
ATCC 6249]
Length = 252
Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 137/233 (58%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA R PR GH+ G+E ++ AA ++G+K +T++AFS NW R
Sbjct: 20 PAHIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQKVTKAANKMGVKVITVYAFSTENWTR 79
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ ++ L F L NN+K+++IG L LK+AE+ T+ NTGL
Sbjct: 80 PDQEVKFIMNLPVEFYDNYVPELHANNVKIQMIGETDRLPKPTFEALKKAEELTKNNTGL 139
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI++A+K + QD+ + D+ +I YL T +P DPDLII
Sbjct: 140 ILNFALNYGGRAEITQALKGLAQDVLDAKINPGDITEDMIGDYLFTQHLPKDLRDPDLII 199
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSE F WPDF A+ +N R+RRFGG+
Sbjct: 200 RTSGELRLSNFLPWQAAYSELYFTDTLWPDFDEAALQEAIAAFNHRNRRFGGV 252
>gi|187924429|ref|YP_001896071.1| undecaprenyl diphosphate synthase [Burkholderia phytofirmans PsJN]
gi|187715623|gb|ACD16847.1| undecaprenyl diphosphate synthase [Burkholderia phytofirmans PsJN]
Length = 260
Score = 207 bits (526), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 105/233 (45%), Positives = 143/233 (61%), Gaps = 3/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH +G++ V A A G++ LT+FAFS NWRR
Sbjct: 17 PRHIAIIMDGNGRWATQRRLPRVAGHTRGVDAVRATVEACARQGVEYLTLFAFSSENWRR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L + L++ L N I++RV+G+ D I ++K AE +T NT L
Sbjct: 77 PNEEVSFLMRLFVTALEREIGKLHANGIRLRVVGDLARFDTRIRDLIKRAETKTARNTRL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L IA NY R +I +A + + Q +G DS A++L + P+PDL IRTG
Sbjct: 137 TLTIAANYGGRWDIMQATRKLAEQSALAGKAVEVTEDS--FAEHLSMAYAPEPDLFIRTG 194
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+R+S+FLLWQ+AY+EF F +WPDF + HA+ Y R+RRFG S +
Sbjct: 195 GERRVSNFLLWQLAYTEFYFTDTFWPDFDADALGHAIASYAERERRFGRTSAQ 247
>gi|332827506|gb|EGK00252.1| di-trans,poly-cis-decaprenylcistransferase [Dysgonomonas gadei ATCC
BAA-286]
Length = 249
Score = 207 bits (526), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 95/232 (40%), Positives = 145/232 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA + L R GH++GI + A+ ++ LT++ FS NW+R
Sbjct: 13 PKHIAVIMDGNGRWAKRQDLDRTFGHKEGISAVRRAIEGASRAEVRYLTLYTFSTENWKR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L+ + L KNN++V+VIG+ L +D L + T + TG
Sbjct: 73 PEEEVKALMSLMVQAVANETPELVKNNVRVKVIGDIDRLPEDTKKALDYCLETTSVCTGT 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ +A +YSS+ E++RA+KNI D++SG + + L++ YL+T +PDPD+++RTGG
Sbjct: 133 TVILALSYSSKWELTRAMKNIVIDVKSGKIEPDAITEDLVSSYLETKGIPDPDILVRTGG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AYSE F E WPDF+ E + A+ + R+RRFG S++
Sbjct: 193 ELRISNFLLWQIAYSELFFSDELWPDFNEESLYKAIVDFQNRERRFGKTSEQ 244
>gi|152995305|ref|YP_001340140.1| undecaprenyl diphosphate synthase [Marinomonas sp. MWYL1]
gi|150836229|gb|ABR70205.1| undecaprenyl diphosphate synthase [Marinomonas sp. MWYL1]
Length = 243
Score = 207 bits (526), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 102/232 (43%), Positives = 144/232 (62%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S+ P HI IIMDGN RWA + LP AGH G +V AAA+ G+K LT+FAFS
Sbjct: 11 SAVGPAHIAIIMDGNNRWAKKKHLPSIAGHTAGAAAVRRVVEAAAKSGVKVLTLFAFSSE 70
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW+RP E+ L+ L LKK L ++ I++RV+G+ + +K ED T+
Sbjct: 71 NWKRPKLEVDGLMTLFMRSLKKELKRLNEHKIRLRVVGDLSGFSGGLQKQIKSVEDATKN 130
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N + L IA NY R +I++A K + + + G + D+D L+ K+++ +D+P PDL+I
Sbjct: 131 NEQMTLVIAANYGGRWDIAQAAKAVAKRVALGELSVEDIDEVLLGKHMELADLPPPDLLI 190
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
RT GE+R+S+FLLWQ AYSEFVF+P WPDF ++ F A+ Y R RR+GG
Sbjct: 191 RTSGEERISNFLLWQTAYSEFVFLPVLWPDFDQQHFDEAVQTYQKRQRRYGG 242
>gi|75909661|ref|YP_323957.1| undecaprenyl pyrophosphate synthase [Anabaena variabilis ATCC
29413]
gi|75703386|gb|ABA23062.1| Undecaprenyl pyrophosphate synthetase [Anabaena variabilis ATCC
29413]
Length = 246
Score = 207 bits (526), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 92/227 (40%), Positives = 140/227 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA ++GLPR AGHR+G E++ + GIK LT +AFS NW+R
Sbjct: 12 PQHIAVIMDGNGRWATSQGLPRIAGHRQGARTLKELLRCCKDWGIKALTAYAFSTENWQR 71
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P+ E+ L+ L + L++ + + +++ IG+ +L + ++ + +T N +
Sbjct: 72 PIEEVDFLMLLFERLLRRELSQMHREGVRISFIGDLSALPKSLQTEMERSMTETLNNQAI 131
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ +A NY SR+EI+RA + + + ++ G + + V+ ++ ++L T D PDL+IRT G
Sbjct: 132 HFTVAVNYGSRNEITRACRQVAELVQQGKLSADAVNEDIVEQHLYTVDTQPPDLLIRTSG 191
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E RLS+FLLWQ+AY+E F WPDF R F AL Y RDRRFG
Sbjct: 192 EMRLSNFLLWQMAYTEMYFTDILWPDFDRAAFHQALLSYQKRDRRFG 238
>gi|218131996|ref|ZP_03460800.1| hypothetical protein BACEGG_03619 [Bacteroides eggerthii DSM 20697]
gi|317474404|ref|ZP_07933678.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides eggerthii
1_2_48FAA]
gi|217985872|gb|EEC52212.1| hypothetical protein BACEGG_03619 [Bacteroides eggerthii DSM 20697]
gi|316909085|gb|EFV30765.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides eggerthii
1_2_48FAA]
Length = 244
Score = 207 bits (526), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 145/232 (62%), Gaps = 2/232 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG R GH+ G E + I A+++GIK LT++ FS NW R
Sbjct: 13 PQHVAIIMDGNGRWAKLRGQERSYGHQAGAETVHIIAEEASKLGIKYLTLYTFSTENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E++ L+ L+ +++ + KNNI R+IG+ L D++ L+ T NTG+
Sbjct: 73 PSNEVAALMALLFDSIEEE--TFMKNNISFRIIGDLTKLPDNVRERLETCVAHTANNTGM 130
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L +A +YSS EI+ A + I ++ G + +DS L +++L T+ +PDPDL+IRTGG
Sbjct: 131 SLVLAISYSSHWEITEAARQIAILVQKGELAPDRIDSHLFSQHLTTNFMPDPDLLIRTGG 190
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E RLS++LLWQ AYSE F YWPDF E A+ Y R+RRFG S++
Sbjct: 191 EVRLSNYLLWQCAYSELYFCDTYWPDFREEALHKAIYDYQKRERRFGKTSEQ 242
>gi|326802542|ref|YP_004320361.1| undecaprenyl pyrophosphate synthase [Sphingobacterium sp. 21]
gi|326553306|gb|ADZ81691.1| Undecaprenyl pyrophosphate synthase [Sphingobacterium sp. 21]
Length = 246
Score = 207 bits (526), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 98/235 (41%), Positives = 151/235 (64%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P HI IIMDGNGRWA RG R GH++G++ +++ A E+G+ LT++ FS N
Sbjct: 10 SKLPRHIAIIMDGNGRWAKERGKLRVFGHKRGVDSVRDVLEGAVEIGVPYLTLYTFSAEN 69
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP E++ L++L+ S + K L N +K+ IGN L L LK+ ++T N
Sbjct: 70 WNRPKLEVAALMELLVSSIGKETKRLMANGVKLNAIGNLDLLPAKALAHLKQCMEETASN 129
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T L +A +YSSR EI+ A K I Q ++ G + + D+D +L A++L++ +PDP+L+IR
Sbjct: 130 TKCTLTLALSYSSRWEIADAAKKIAQSVQQGLLKADDIDEALFAQHLNSYPLPDPELMIR 189
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
T GE+R+S++LLWQ+AY+E F + WPDF R+ + A+ ++ R+RRFG S++
Sbjct: 190 TSGEQRISNYLLWQLAYAELYFTSKLWPDFRRDDLYAAIVEFQNRERRFGLTSEQ 244
>gi|270292050|ref|ZP_06198265.1| undecaprenyl diphosphate synthase [Streptococcus sp. M143]
gi|270279578|gb|EFA25420.1| undecaprenyl diphosphate synthase [Streptococcus sp. M143]
Length = 258
Score = 207 bits (526), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 137/233 (58%), Gaps = 4/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA R PR GH+ G+E ++ AA ++G+K +T++AFS NW R
Sbjct: 26 PAHIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQKVTKAANKMGVKVITVYAFSTENWTR 85
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ ++ L F L NN+K+++IG L LK+AE+ T+ NTGL
Sbjct: 86 PDQEVKFIMNLPVEFYDNYVPELHANNVKIQMIGETDRLPKPTFEALKKAEELTQNNTGL 145
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI++A+K + QD+ + D+ +I YL T +P DPDLII
Sbjct: 146 ILNFALNYGGRAEITQALKGLAQDVLDAKINPGDITEDMIGDYLFTQHLPKDLRDPDLII 205
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+FL WQ AYSE F WPDF A+ +N R+RRFGG+
Sbjct: 206 RTSGELRLSNFLPWQAAYSELYFTDTLWPDFDEAALQEAIAAFNHRNRRFGGV 258
>gi|119471163|ref|ZP_01613695.1| undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans-poly-cis-decaprenylcistransferase)
[Alteromonadales bacterium TW-7]
gi|119445819|gb|EAW27101.1| undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans-poly-cis-decaprenylcistransferase)
[Alteromonadales bacterium TW-7]
Length = 259
Score = 207 bits (526), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 96/227 (42%), Positives = 141/227 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA AR PR GH+KG++ + V ++G+++LT+FAFS NWRR
Sbjct: 20 PKHVAIIMDGNGRWAQARNRPRVYGHKKGVDAVRQSVQFCTKLGVQSLTLFAFSSENWRR 79
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L++L L K L KNN+K+ +IG+ + + + A+ T NTGL
Sbjct: 80 PEDEVNTLMELFLFVLTKEVKKLHKNNVKLTIIGDLSRFSEGLQNKVHSAQQLTENNTGL 139
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY R +++ A K + + SG + + D+ IA+++ +D P+PDL+IRTGG
Sbjct: 140 CLNVAANYGGRWDMANAAKQLAMQVASGDIDAQDITEERIAQHISMADQPEPDLLIRTGG 199
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+ R+S+FLLWQ AY+E F WPDF+ F A+ Y R+RRFG
Sbjct: 200 DVRISNFLLWQAAYAELYFTETLWPDFNEAAFAEAIACYVARERRFG 246
>gi|302036856|ref|YP_003797178.1| undecaprenyl pyrophosphate synthase [Candidatus Nitrospira
defluvii]
gi|190343271|gb|ACE75659.1| undecaprenyl pyrophosphate synthase [Candidatus Nitrospira
defluvii]
gi|300604920|emb|CBK41253.1| Undecaprenyl pyrophosphate synthase [Candidatus Nitrospira
defluvii]
Length = 261
Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 97/227 (42%), Positives = 141/227 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA RGLPR AGH++GI+ E+++ + E+GIK LTI+AFS NW R
Sbjct: 27 PKHLAVIMDGNGRWAELRGLPRIAGHQEGIKSVRELISLSLELGIKVLTIYAFSQENWNR 86
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EI+ L+ L++ +L SL + ++ + IG +L L ++ E +T L
Sbjct: 87 PAQEITALMGLLEHYLSTERSSLVEKGVRFQTIGRVTALPPSALQWVRTTEQETAHLDKL 146
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y R E+ A K + + ++SG + +D + + L T ++PDPDL+IRT G
Sbjct: 147 ILNVALSYGGRAELVDAAKELARAVQSGRLSPDQIDEQAMQRALYTHNLPDPDLLIRTSG 206
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+FLLWQ+AY+E F P WPDF R AL +Y R+RRFG
Sbjct: 207 ETRISNFLLWQLAYTELYFTPTLWPDFRRRETLVALIEYQRRERRFG 253
>gi|313633415|gb|EFS00249.1| di-trans,poly-cis-decaprenylcistransferase [Listeria seeligeri FSL
N1-067]
Length = 252
Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/229 (44%), Positives = 142/229 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R LPR AGH++G++V + A +GI LT++AFS NW+R
Sbjct: 24 PRHVAIIMDGNGRWAKKRFLPRIAGHKEGMDVVKRVTRYANAIGIDVLTLYAFSTENWKR 83
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL F L + N++V V+G R +L D + +++A T TGL
Sbjct: 84 PTDEVDFLMKLPVEFFDSFVPELIEENVRVNVMGYRENLPDHTMRAVEKAIADTAHCTGL 143
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY R EI A K +++ S + D+ +++ +L +S + DPDL+IRT G
Sbjct: 144 TLNFALNYGGRSEIITAAKEAVKELVSEGNSADDLTEDMLSNHLMSSGLGDPDLLIRTSG 203
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+F+LWQ+AYSEF F +WPDFS+E F A+ +Y R RRFGGL
Sbjct: 204 ELRLSNFMLWQLAYSEFYFTDTHWPDFSKEDFLQAIIEYQNRSRRFGGL 252
>gi|325107196|ref|YP_004268264.1| undecaprenyl pyrophosphate synthetase [Planctomyces brasiliensis
DSM 5305]
gi|324967464|gb|ADY58242.1| Undecaprenyl pyrophosphate synthetase [Planctomyces brasiliensis
DSM 5305]
Length = 260
Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 93/229 (40%), Positives = 143/229 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA ARGLPR GHR+G I+ A E+G++ LT++ S NW+R
Sbjct: 30 PRHIAVIMDGNGRWAQARGLPRIEGHRQGANSVRAIIEAGVELGLEQLTLYCLSSENWKR 89
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+S L+ L++ +L + + +I+ VIG L D + + D + N G+
Sbjct: 90 PAAELSFLMYLLERYLVDERPEILRQDIQFSVIGRIEDLSDAVRREIDTTRDLSSGNGGM 149
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY +R EI A++++ + + +G + ++D L++ + T+ +PDPDL++RT G
Sbjct: 150 RLCLALNYGARGEIVDAVRHLAERVAAGELAPEEIDEQLLSDSMYTAGMPDPDLVVRTSG 209
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R S+FLLWQ++YSE ++WPDF + F HA+ +Y R RRFGGL
Sbjct: 210 EMRFSNFLLWQISYSELWVTDKFWPDFGKADFIHAIREYAGRSRRFGGL 258
>gi|114321010|ref|YP_742693.1| undecaprenyl pyrophosphate synthetase [Alkalilimnicola ehrlichii
MLHE-1]
gi|114227404|gb|ABI57203.1| Undecaprenyl pyrophosphate synthetase [Alkalilimnicola ehrlichii
MLHE-1]
Length = 257
Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/241 (41%), Positives = 149/241 (61%), Gaps = 1/241 (0%)
Query: 3 ASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
A + + P P+H+ IIMDGNGRWA ARGLPR AGHR G +V +GI LT+F
Sbjct: 9 AQVSADGPLPEHVAIIMDGNGRWARARGLPRHAGHRAGAATVRRVVEHCGRLGIHALTLF 68
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP E+S L++L S L K L +N++++R +G R + L +AE
Sbjct: 69 AFSSENWRRPRKEVSVLMELFLSTLDKESARLHRNDVRLRFMGAREDFPRRLQQRLADAE 128
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
TR NTGL L +A +Y R +I+ A + + + +++G + ++ + + K + +++P+
Sbjct: 129 ALTRDNTGLQLNVAASYGGRWDIANAARRLAEAVQAGHLQPDEITTETLGKEVCLAELPE 188
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL IRTGGE+R+S+F+LWQ+AY+E F P WP F+ + AL + R+RRFG S
Sbjct: 189 PDLFIRTGGERRISNFMLWQLAYTELYFTPVLWPAFTTDHLDEALADFAGRERRFGRTSD 248
Query: 242 K 242
+
Sbjct: 249 Q 249
>gi|220934337|ref|YP_002513236.1| undecaprenyl diphosphate synthase [Thioalkalivibrio sp. HL-EbGR7]
gi|219995647|gb|ACL72249.1| undecaprenyl diphosphate synthase [Thioalkalivibrio sp. HL-EbGR7]
Length = 261
Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/227 (44%), Positives = 140/227 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA AR LPR GHR+G+ V A G++ LT+FAFS NW+R
Sbjct: 24 PRHVAIIMDGNGRWARARHLPRTEGHRQGVHATRTAVRFCAARGVQALTLFAFSSENWKR 83
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E++ L+ L S L+K L +NNI++R IG R + D + + EAE TR NTG+
Sbjct: 84 PSAEVNTLMSLFVSALEKELPELVQNNIRLRFIGEREAFSDKLKHRIHEAEAATRDNTGM 143
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA +Y R +I+ A++ + ++ G + + + + L T+ +PDPDL IRTGG
Sbjct: 144 ELVIAVSYGGRWDITAAVRCLAVEVAEGRLDPASISVETLDRQLSTAGLPDPDLFIRTGG 203
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+RLS+FLLWQ+AY+E F WPDF + A + R+RRFG
Sbjct: 204 ERRLSNFLLWQLAYTELYFCDVLWPDFDEDALQAAFEFFAGRERRFG 250
>gi|196229590|ref|ZP_03128455.1| undecaprenyl diphosphate synthase [Chthoniobacter flavus Ellin428]
gi|196226822|gb|EDY21327.1| undecaprenyl diphosphate synthase [Chthoniobacter flavus Ellin428]
Length = 236
Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 93/229 (40%), Positives = 143/229 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RGLPR GH +G E + A E+G++ LT++AFS NW+R
Sbjct: 8 PKHVAIIMDGNGRWAKERGLPRMKGHEQGAESVRAVTEACVELGVEYLTVYAFSTENWKR 67
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E++ L L++ F+++ +L KN ++++ IG L + L++ + T N
Sbjct: 68 PAAEVNALWTLLEHFIEQETPTLMKNGVRLQAIGRIHELPESCQTALRKTIELTANNPKT 127
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NYS R EI ++N+ ++ +G++ +D +++L T + PDPDL+IRT G
Sbjct: 128 TLVLALNYSGRTEIIDTVRNLCREAAAGALDIESLDEKAFSRHLYTGNFPDPDLLIRTSG 187
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+FLLWQ++Y+E + WPDF +E A+ ++N R RRFGGL
Sbjct: 188 ELRLSNFLLWQLSYTEIYVTQKMWPDFCKEDLRDAIREFNKRQRRFGGL 236
>gi|146278187|ref|YP_001168346.1| undecaprenyl diphosphate synthase [Rhodobacter sphaeroides ATCC
17025]
gi|145556428|gb|ABP71041.1| Undecaprenyl pyrophosphate synthetase [Rhodobacter sphaeroides ATCC
17025]
Length = 245
Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 99/236 (41%), Positives = 148/236 (62%), Gaps = 4/236 (1%)
Query: 8 SSPP----DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ PP DH+ IIMDGNGRWA RG PR GHR+G E EIV A+ +GI+ LTI+AF
Sbjct: 7 ADPPRRRADHVAIIMDGNGRWAVNRGWPRLVGHRRGAERVREIVKASPNLGIRWLTIYAF 66
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + ++++ L + +++R IG+R LD + ++ E +
Sbjct: 67 STENWKRSTEEVLGLMSIFARYIEREADRLAQEGVRMRFIGDRTRLDAKLQRLMASIEAR 126
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N L+L +A NY RDE++RA + + +D+ G + + D + +A LDT+ +PDPD
Sbjct: 127 TQFNQRLHLTVAINYGGRDELARAARRMCEDVAEGRLRPDEADEAALAARLDTAGMPDPD 186
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
L+IRT GE R S+FL WQ AY+E+ F P WPDF+ + +Y +R+RRFGG+
Sbjct: 187 LVIRTSGETRTSNFLPWQSAYAEYDFSPTLWPDFTATELAAIIERYGVRERRFGGV 242
>gi|254420006|ref|ZP_05033730.1| undecaprenyl diphosphate synthase [Brevundimonas sp. BAL3]
gi|196186183|gb|EDX81159.1| undecaprenyl diphosphate synthase [Brevundimonas sp. BAL3]
Length = 252
Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 95/231 (41%), Positives = 142/231 (61%), Gaps = 1/231 (0%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P H+ IIMDGNGRWA+ARGLPR GHR+G++ + AA + GI+ LT+F FS N
Sbjct: 13 SDGPRHVAIIMDGNGRWASARGLPRTMGHREGVQALKRTIQAAPDFGIQCLTVFGFSTEN 72
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP E+S+L+ L+++++ L+K +++R++G R L DI ++++AE QT N
Sbjct: 73 WSRPAEEVSDLMGLVRTYVASDLARLEKAGVRLRILGRRDGLPSDIAAIIEKAERQTAHN 132
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L +AFNY R ++ A + Q + +G +D +A L T+ P DLI+R
Sbjct: 133 DRFMLQVAFNYGGRADLVDAARRHMQRLLAGETV-EPIDEDTLAAGLATAGSPPLDLIVR 191
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
T GE+RLS+FLLW+ AY+E VF WPD+ + A+ + R+RR+GG
Sbjct: 192 TSGEQRLSNFLLWEAAYAELVFQDILWPDYGPKALGEAVAAFAQRERRYGG 242
>gi|167837037|ref|ZP_02463920.1| undecaprenyl diphosphate synthase [Burkholderia thailandensis
MSMB43]
Length = 260
Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 141/232 (60%), Gaps = 1/232 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH +G++ +V A G++ LT+FAFS NWRR
Sbjct: 17 PRHIAIIMDGNGRWATERRLPRVAGHTRGVDAVRSVVEGCARAGVEYLTLFAFSSENWRR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L + L++ L N I++RVIG+ + I +++ AE +T NT L
Sbjct: 77 PNDEVSFLMRLFITALEREVGKLHANGIRLRVIGDLTKFEPRIQALIRRAETKTARNTRL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I +A + + + + +VD A++L + P+PDL IRTGG
Sbjct: 137 TLTIAANYGGRWDILQATQKLIDEAAREGRAA-EVDEDAFARHLAMAYAPEPDLFIRTGG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FLLWQ+AY+EF F +WPDF AL Y R+RRFG S +
Sbjct: 196 EQRISNFLLWQLAYTEFYFTDTFWPDFDAGALAEALASYTHRERRFGRTSAQ 247
>gi|116872746|ref|YP_849527.1| undecaprenyl diphosphate synthase [Listeria welshimeri serovar 6b
str. SLCC5334]
gi|116741624|emb|CAK20748.1| undecaprenyl diphosphate synthase [Listeria welshimeri serovar 6b
str. SLCC5334]
Length = 252
Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 101/229 (44%), Positives = 141/229 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R LPR AGH++G++V + A+ +GI LT++AFS NW+R
Sbjct: 24 PSHVAIIMDGNGRWAKKRFLPRIAGHKEGMDVVKRVTRYASAIGIDVLTLYAFSTENWKR 83
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL F L + N++V V+G R +L + + +++A T TGL
Sbjct: 84 PTDEVDFLMKLPVEFFDSFVPELIEENVRVNVMGYRENLPEHTMRAVEKAIADTSHCTGL 143
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY R EI A K +++ S D+ ++ +L +S + DPDL+IRT G
Sbjct: 144 TLNFALNYGGRSEIITAAKEAMKELALEGKSSEDLTEEILNNHLMSSGLGDPDLLIRTSG 203
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+F+LWQ+AYSEF F +WPDFS+E F A+ +Y R RRFGGL
Sbjct: 204 ELRLSNFMLWQLAYSEFYFTETHWPDFSKEDFLQAIIEYQNRTRRFGGL 252
>gi|288941762|ref|YP_003444002.1| undecaprenyl diphosphate synthase [Allochromatium vinosum DSM 180]
gi|288897134|gb|ADC62970.1| undecaprenyl diphosphate synthase [Allochromatium vinosum DSM 180]
Length = 263
Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/227 (44%), Positives = 142/227 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG PR AGHR+G++ +V + G++ LT+FAFS NWRR
Sbjct: 18 PRHVAIIMDGNGRWAKQRGRPRTAGHREGVKSVRAVVEESVRRGVETLTLFAFSSENWRR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E++ L++L + L+ L +N + +RVIG R + + + + EAE T NT L
Sbjct: 78 PRTEVNILMELFMTALRSEARRLNENGVCLRVIGERGAFPEKLQQRIAEAEALTADNTRL 137
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL +A NY R +I +A++ + D+++G + +D +A L D+P+PDL IRTGG
Sbjct: 138 NLQVAANYGGRWDIVQAVRQLALDVQAGWLDPSQIDERRLADRLSFPDLPEPDLFIRTGG 197
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+RLS+F+LWQ AYSE F WPDF + AL+ Y R RRFG
Sbjct: 198 EQRLSNFVLWQSAYSELYFSDVLWPDFDAAAYGQALDDYARRQRRFG 244
>gi|126666176|ref|ZP_01737156.1| undecaprenyl diphosphate synthase [Marinobacter sp. ELB17]
gi|126629498|gb|EBA00116.1| undecaprenyl diphosphate synthase [Marinobacter sp. ELB17]
Length = 255
Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 143/237 (60%), Gaps = 2/237 (0%)
Query: 3 ASMMSSSP--PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A++ S+P P H+ +IMDGN RWA AR L AGH+ G++ +V A G+K +T+
Sbjct: 7 AAIPESAPSRPKHVAVIMDGNNRWAKARHLAGVAGHKAGVDAVRAVVETCAREGVKVVTL 66
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NWRRP E+S L+KL L++ L +NNI +R+IG R + + ++ +A
Sbjct: 67 FAFSSENWRRPQDEVSALMKLFVFALEREVRKLHRNNICLRLIGERSAFSPLLQNLMAKA 126
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E T NT + L IA NY + +I+ A + I + SG + D+ LI +L D+P
Sbjct: 127 ETLTADNTAMTLVIAANYGGQWDITEATRKIAGKVASGQLQPSDITEDLIQNHLSLGDLP 186
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDL+IRT GE+R+S+F+LW +AY+EF F P +WPDF + AL Y R RRFG
Sbjct: 187 MPDLMIRTAGEQRISNFMLWHLAYTEFYFSPVFWPDFKQPQMQEALAAYAARQRRFG 243
>gi|148272760|ref|YP_001222321.1| putative undecaprenyl pyrophosphate synthetase [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
gi|147830690|emb|CAN01630.1| putative undecaprenyl pyrophosphate synthetase [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
Length = 288
Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/228 (42%), Positives = 142/228 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI ++MDGNGRWA RGLPR AGH+ G E + + VA A ++G +L+++AFS NW+R
Sbjct: 31 PKHIAVVMDGNGRWANQRGLPRTAGHQAGEEAWFDTVAGAVQLGATHLSVYAFSTENWKR 90
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
+E+ L+ + + + L N+++R G R L ++ L+ AE+ T+ NTG+
Sbjct: 91 SPAEVRFLMGFNRDVIHRRRDQLNAWNVRIRWAGRRPRLWRSVIDDLQVAEEMTKDNTGM 150
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R EI A++ I +D+++G + + VD I +YL DVPD DL IR+ G
Sbjct: 151 TLTMCINYGGRTEIGDAVRRIAEDVDAGRLKASRVDERTIQRYLYLPDVPDVDLFIRSSG 210
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S+FLLWQ AY+E VF+ WPDF R + A+ Y RDRRFGG
Sbjct: 211 EQRTSNFLLWQSAYAEMVFLDRLWPDFRRTDLWDAVESYVHRDRRFGG 258
>gi|327312847|ref|YP_004328284.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella denticola
F0289]
gi|326944605|gb|AEA20490.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella denticola
F0289]
Length = 250
Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 146/245 (59%), Gaps = 5/245 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
MV + + P HI IIMDGNGRWA R PR GH+ G+E I + +G+K LT+
Sbjct: 1 MVEELDMTRIPRHIAIIMDGNGRWATERNKPRSYGHQAGVETVRRITSECVRLGVKYLTL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW RP EI+ L+ L+ + L+ + KNN++ RVIG+R L +++ L+E
Sbjct: 61 YTFSTENWNRPTDEIAALMGLVLTSLEDEIFM--KNNVRFRVIGDRERLPEEVQEKLRET 118
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCS---HDVDSSLIAKYLDTS 177
E T N + + +A +YS+R EI++A+K I + + + + L+ +++ T+
Sbjct: 119 ELHTEKNAAMTMVVALSYSARWEITQAMKEIVTEHQQENAVPLRPEMITEELLDRHMQTN 178
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+PDPDL+IRTGGE R+S++LLWQ+AYSE F YWPDFS A+ + R RRFG
Sbjct: 179 FMPDPDLLIRTGGELRISNYLLWQIAYSELYFCDTYWPDFSEHDLQKAITSFQSRQRRFG 238
Query: 238 GLSKK 242
K+
Sbjct: 239 KTEKQ 243
>gi|83720615|ref|YP_442555.1| undecaprenyl diphosphate synthase [Burkholderia thailandensis E264]
gi|167581482|ref|ZP_02374356.1| undecaprenyl diphosphate synthase [Burkholderia thailandensis
TXDOH]
gi|167619592|ref|ZP_02388223.1| undecaprenyl diphosphate synthase [Burkholderia thailandensis Bt4]
gi|257138764|ref|ZP_05587026.1| undecaprenyl diphosphate synthase [Burkholderia thailandensis E264]
gi|83654440|gb|ABC38503.1| undecaprenyl diphosphate synthase [Burkholderia thailandensis E264]
Length = 260
Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 142/232 (61%), Gaps = 1/232 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH +G++ +V A G++ LT+FAFS NWRR
Sbjct: 17 PRHIAIIMDGNGRWATERRLPRVAGHTRGVDAVRSVVEGCARSGVEYLTLFAFSSENWRR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L + L++ L N I++RVIG+ + I +++ AE +T NT L
Sbjct: 77 PNDEVSFLMRLFITALEREVGKLHANGIRLRVIGDLTKFEPRIQALIRRAETKTARNTRL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I +A + + ++ + ++D A++L + P+PDL IRTGG
Sbjct: 137 TLTIAANYGGRWDILQATRKLVEEAAREGRAA-EIDEDAFARHLAMAYAPEPDLFIRTGG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FLLWQ+AY+EF F +WPDF AL Y R+RRFG S +
Sbjct: 196 EQRISNFLLWQLAYTEFYFTDTFWPDFDAGALAEALASYTHRERRFGRTSAQ 247
>gi|293390813|ref|ZP_06635147.1| di-trans,poly-cis-decaprenylcistransferase [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290951347|gb|EFE01466.1| di-trans,poly-cis-decaprenylcistransferase [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 239
Score = 206 bits (524), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/228 (42%), Positives = 141/228 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R GH+ G+ E V+ A ++G+K LT++AFS NW R
Sbjct: 10 PQHVAIIMDGNGRWAKQQGKMRIFGHKNGVAAVREAVSYARKIGVKYLTLYAFSSENWNR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L L L KNNI+++++GN + + + +K+AE T NT L
Sbjct: 70 PEQEVSALMNLFMQALDFEVKKLHKNNIRLKILGNVVRFSEGLQEKIKKAEKLTENNTAL 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I +A + + Q I++ + ++D +L+ ++L T D P+ DL+IRT G
Sbjct: 130 TLNIAANYGGRWDIVQAAQQLAQKIQTQQLAVTEIDEALLQQHLVTQDEPEVDLLIRTSG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R+S+FLLWQ AY+EF F WPDF+ F A+ Y R RRFGG
Sbjct: 190 EQRISNFLLWQTAYAEFYFSDVLWPDFNEAEFHQAILSYQQRHRRFGG 237
>gi|332289932|ref|YP_004420784.1| undecaprenyl pyrophosphate synthase [Gallibacterium anatis UMN179]
gi|330432828|gb|AEC17887.1| undecaprenyl pyrophosphate synthase [Gallibacterium anatis UMN179]
Length = 241
Score = 206 bits (524), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 105/239 (43%), Positives = 146/239 (61%), Gaps = 3/239 (1%)
Query: 6 MSSSP---PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
MS P P H+ IIMDGNGRWA +G R GHR G + V AA+ GIK LT++A
Sbjct: 1 MSLDPEKIPQHVAIIMDGNGRWAKQKGKLRVFGHRNGAQAVKRAVYYAAQTGIKYLTLYA 60
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW+RP +E++ L+ L L L KNNI++ ++G+ + + + A+
Sbjct: 61 FSSENWQRPENEVNALMDLFIRMLDLEVNKLHKNNIRLNILGDISRFSEGLQKRIHHAQQ 120
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T+ NT L L IA NY R +I +A K + +D+++ ++ +VD +L + YL T+D P
Sbjct: 121 LTQNNTQLTLNIAANYGGRWDILQAAKQMCRDVQTNNLELENVDEALFSHYLTTADQPMV 180
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRT GE+R+S+FLLWQ AY+EF F WPDFS + F AL Y R+RRFG LSK
Sbjct: 181 DLLIRTSGEQRISNFLLWQAAYAEFYFTEVLWPDFSEQEFEQALYFYQQRERRFGALSK 239
>gi|260910459|ref|ZP_05917128.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella sp. oral
taxon 472 str. F0295]
gi|260635405|gb|EEX53426.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella sp. oral
taxon 472 str. F0295]
Length = 245
Score = 206 bits (524), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 144/227 (63%), Gaps = 2/227 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA RG R GH+ G++ I + +G+K LT++ FS NW R
Sbjct: 11 PRHIAIIMDGNGRWAKERGKERSFGHQAGVDTVRRITSECVRLGVKFLTLYTFSTENWSR 70
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +EI+ L+ L+ S L+ + KNN++ +V+G+ L + L+E + T NT +
Sbjct: 71 PETEIAALMGLVLSSLEDEIF--MKNNVRFQVVGDIERLPQSVQDKLRETMEHTARNTAM 128
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ +A +YSSR E++RA ++I +D++ G++ D+ L+ + L+T+ +PDP+L+IRTGG
Sbjct: 129 TMVVALSYSSRWELTRAAQSIARDVKQGTLQPEDITEELMNQRLETAFMPDPELLIRTGG 188
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+++LWQ+AYSE F YWPDF+ A+ Y R RRFG
Sbjct: 189 ELRISNYMLWQIAYSELYFCDTYWPDFNEVDLHQAIASYQARQRRFG 235
>gi|198275389|ref|ZP_03207920.1| hypothetical protein BACPLE_01551 [Bacteroides plebeius DSM 17135]
gi|198271725|gb|EDY95995.1| hypothetical protein BACPLE_01551 [Bacteroides plebeius DSM 17135]
Length = 243
Score = 206 bits (524), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/232 (42%), Positives = 146/232 (62%), Gaps = 2/232 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA +G R GH+ G E + I AA++G+K LT++ FS NW R
Sbjct: 13 PAHIAIIMDGNGRWAKQQGHARTFGHQAGAETVHVIAEEAAQLGVKYLTLYTFSTENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
PV E++ L+ L+ +++ + KNNI R+IG L +++L L + ++T NTG+
Sbjct: 73 PVDEVAALMSLLMDSIEEE--TFMKNNISFRIIGETEKLPENVLARLNKCIERTSKNTGM 130
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +YSS+ EI+ A+K I ++++ G + ++ I + L T +PDPDL+IRTGG
Sbjct: 131 CLTLALSYSSKWEITEAVKKIAREVKEGILTPEEITDQTINRCLATHYMPDPDLLIRTGG 190
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E RLS++LLWQ AY+E F +WPDF E A+ + R+RRFG S++
Sbjct: 191 EIRLSNYLLWQCAYAELYFCDTFWPDFKAEELCKAICDFQKRERRFGKTSEQ 242
>gi|47096940|ref|ZP_00234517.1| undecaprenyl diphosphate synthase [Listeria monocytogenes str. 1/2a
F6854]
gi|254898520|ref|ZP_05258444.1| di-trans,poly-cis-decaprenylcistransferase [Listeria monocytogenes
J0161]
gi|254911989|ref|ZP_05262001.1| undecaprenyl pyrophosphate synthetase [Listeria monocytogenes
J2818]
gi|254936316|ref|ZP_05268013.1| undecaprenyl diphosphate synthase [Listeria monocytogenes F6900]
gi|47014700|gb|EAL05656.1| undecaprenyl diphosphate synthase [Listeria monocytogenes str. 1/2a
F6854]
gi|258608906|gb|EEW21514.1| undecaprenyl diphosphate synthase [Listeria monocytogenes F6900]
gi|293589953|gb|EFF98287.1| undecaprenyl pyrophosphate synthetase [Listeria monocytogenes
J2818]
Length = 252
Score = 206 bits (524), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 101/229 (44%), Positives = 141/229 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R LPR AGH++G++V + A +GI LT++AFS NW+R
Sbjct: 24 PRHVAIIMDGNGRWAKKRFLPRIAGHKEGMDVVKRVTRYANAIGIDVLTLYAFSTENWKR 83
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL F L + N++V V+G R +L D + +++A T TGL
Sbjct: 84 PTDEVDFLMKLPVEFFDSFVPELIEENVRVNVMGYRENLPDHTMRAVEKAIADTAHCTGL 143
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY R EI A K +++E + ++ ++ +L +S + DPDL+IRT G
Sbjct: 144 TLNFALNYGGRSEIITAAKEAMKELEHEGKSAENLTEEMLNDHLMSSGLGDPDLLIRTSG 203
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+F+LWQ+AYSEF F +WPDFS+E F A+ +Y R RRFGGL
Sbjct: 204 ELRLSNFMLWQLAYSEFYFTDTHWPDFSKEDFLQAIIEYQNRSRRFGGL 252
>gi|224025260|ref|ZP_03643626.1| hypothetical protein BACCOPRO_01997 [Bacteroides coprophilus DSM
18228]
gi|224018496|gb|EEF76494.1| hypothetical protein BACCOPRO_01997 [Bacteroides coprophilus DSM
18228]
Length = 243
Score = 206 bits (524), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 145/232 (62%), Gaps = 2/232 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA RG R GH+ G E + I AA +G+K LT++ FS NW R
Sbjct: 13 PSHIAIIMDGNGRWAKQRGQIRTFGHQAGAETVHVIAEEAARLGVKYLTLYTFSTENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
PV E++ L+ L+ +++ + KNNI R+IG+ L +++L L ++T +NTG+
Sbjct: 73 PVDEVAALMSLLMDSIEEE--TFMKNNISFRIIGDTSKLPENVLERLNRCIERTSVNTGM 130
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +YSS+ EI+ A++ I + +G + + ++ + +L T +PDPDL+IRTGG
Sbjct: 131 CLTLALSYSSKWEITEAVRQIASRVFAGDLKADEITDQTVDGFLATHYMPDPDLLIRTGG 190
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E RLS+FLLWQ AYSE F +WPDF E A+ Y R+RRFG S++
Sbjct: 191 EVRLSNFLLWQCAYSELYFCDTFWPDFKAEELCKAICDYQRRERRFGKTSEQ 242
>gi|255659933|ref|ZP_05405342.1| di-trans,poly-cis-decaprenylcistransferase [Mitsuokella multacida
DSM 20544]
gi|260847804|gb|EEX67811.1| di-trans,poly-cis-decaprenylcistransferase [Mitsuokella multacida
DSM 20544]
Length = 267
Score = 206 bits (524), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 94/232 (40%), Positives = 144/232 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA +GL R AGH+ G++ +++ A ++ I+ LT++AFS NW+R
Sbjct: 36 PRHVAVIMDGNGRWAQGKGLIRTAGHKAGVKTLKDVLKTAIDLRIEALTVYAFSTENWKR 95
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL +L K + N+++R IG + + + ++EAE + NTG+
Sbjct: 96 PRPEVEFLMKLFSEYLLKELEEMNDYNVRIRFIGRMEGMPEGLQRQMREAEALMKDNTGI 155
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY +DE+ RA +++ + G + D+D+ I + LDT+ P DL+IRT G
Sbjct: 156 RFNVAANYGGQDELIRAAQSLARQAAEGKIAPEDIDAEAIEQELDTAGDPPVDLVIRTSG 215
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
++RLS+FLLWQ AY+EF F WPDF+ F A+ + RDRRFGGL+ K
Sbjct: 216 DQRLSNFLLWQSAYAEFYFTDVNWPDFTPACFVDAMVDFAGRDRRFGGLTNK 267
>gi|89092093|ref|ZP_01165048.1| undecaprenyl diphosphate synthase [Oceanospirillum sp. MED92]
gi|89083828|gb|EAR63045.1| undecaprenyl diphosphate synthase [Oceanospirillum sp. MED92]
Length = 253
Score = 206 bits (524), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 147/232 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGN RWA R LP AGH+ G++ ++ E+G++ LT+FAFS NW+R
Sbjct: 15 PRHIAIIMDGNNRWAKERRLPGLAGHKAGVDCVRSVIEGCMEMGVEALTLFAFSSENWKR 74
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L K L + L KNNI++RV+G++ + + +++ E T+ GL
Sbjct: 75 PPLEVKGLMELFKLALDREAKKLVKNNIRLRVVGDKTAFSSSLQAKIEKVEGMTQDCDGL 134
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L IA NY R +I A + + + +SGS+ D++ +L A+ + +D+P+PDL IRTGG
Sbjct: 135 HLNIAANYGGRWDIVSAAQRLAELCQSGSIQPADINETLFAQNISLADIPEPDLCIRTGG 194
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FL+WQ AY+E F YWPDF +E A+ Y+ R RRFG S++
Sbjct: 195 EQRISNFLIWQFAYTELFFSDAYWPDFDKEHLKKAVVDYSGRQRRFGKTSEQ 246
>gi|15644150|ref|NP_229199.1| undecaprenyl pyrophosphate synthase [Thermotoga maritima MSB8]
gi|42560019|sp|Q9X1B8|UPPS_THEMA RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|4981961|gb|AAD36469.1|AE001792_9 conserved hypothetical protein [Thermotoga maritima MSB8]
Length = 233
Score = 206 bits (524), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/229 (44%), Positives = 143/229 (62%), Gaps = 2/229 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RGLPR GH++G EV + V + E+GIK LT F+FS NW+R
Sbjct: 4 PQHVAIIMDGNGRWAKKRGLPRIKGHQRGAEVLHNTVKWSLELGIKYLTAFSFSTENWKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L + + L++ ++VR++G + L + +L +E E++T+ +
Sbjct: 64 PKEEVEFLMDLFVQMIDREMELLRRERVRVRILGRKEGLPEKVLKKWQEVEEKTKEFDRM 123
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IAFNY R EI A++ I +D+ G ++ +YL DVPDPDLIIRT G
Sbjct: 124 TLIIAFNYGGRREILDAVEFILKDVSHGKKI--ELTEETFRQYLYLPDVPDPDLIIRTSG 181
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+FLLWQ AYSE F + WPDF++ F A+ Y+ R+RRFGGL
Sbjct: 182 EMRLSNFLLWQSAYSELYFFKKLWPDFTKRDFLRAIESYSKRERRFGGL 230
>gi|148265749|ref|YP_001232455.1| undecaprenyl pyrophosphate synthase [Geobacter uraniireducens Rf4]
gi|146399249|gb|ABQ27882.1| Undecaprenyl pyrophosphate synthetase [Geobacter uraniireducens
Rf4]
Length = 256
Score = 206 bits (524), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 140/232 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA R L R GH+KG+E IV + +GI LT+FAFS NW R
Sbjct: 10 PRHLAVIMDGNGRWAKQRMLRRIVGHQKGVETVRLIVEECSRLGISYLTLFAFSAENWLR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L+ L+K +++ + NNI+ VIG+R L DI V+ +A QT N+G+
Sbjct: 70 PKTEVKALMALLKKYIRSEIARMMHNNIRFNVIGDRGELPVDINRVIDDAIAQTAGNSGM 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y +R EI A + I D SG + D++ L + YL T+ +P+PD +IRT G
Sbjct: 130 LLTLALSYGARQEIVHAARQIAIDAASGKIAIDDINEGLFSDYLYTTRIPEPDFLIRTSG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AY+E F WPDF + A Y R+RRFG S +
Sbjct: 190 EMRISNFLLWQLAYTELYFTDVNWPDFDKNELAKAFRDYQSRERRFGKTSDQ 241
>gi|332982467|ref|YP_004463908.1| undecaprenyl diphosphate synthase [Mahella australiensis 50-1 BON]
gi|332700145|gb|AEE97086.1| undecaprenyl diphosphate synthase [Mahella australiensis 50-1 BON]
Length = 246
Score = 206 bits (524), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 99/230 (43%), Positives = 143/230 (62%), Gaps = 1/230 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RGLPR GH+ G+EV +V ++++GIK LT++AFS NW+R
Sbjct: 17 PVHVAIIMDGNGRWAKQRGLPRIMGHKAGMEVIRNVVKMSSKLGIKFLTLYAFSTENWKR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L++L+ +L K L NN+K+ IG L L + + T NTGL
Sbjct: 77 PGEEVNFLMRLLVEYLNKEVEELNTNNVKITSIGRISELPQVAYEQLVRSMNYTAGNTGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSV-CSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L +A NY R EI A+ + DI++G + D++ + + YL T+ +PDPDL+IRT
Sbjct: 137 TLNLALNYGGRIEILDAVNAVINDIKTGKLPVDADINQNTFSSYLYTASIPDPDLLIRTS 196
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE+R+S+FLL+Q+AY+E F YWPDF + A+ Y R RR+G +
Sbjct: 197 GERRVSNFLLYQIAYTEMYFSDVYWPDFDDAEYLRAIMDYQNRHRRYGAI 246
>gi|187478232|ref|YP_786256.1| undecaprenyl pyrophosphate synthase [Bordetella avium 197N]
gi|115422818|emb|CAJ49346.1| undecaprenyl pyrophosphate synthetase [Bordetella avium 197N]
Length = 250
Score = 206 bits (524), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 143/232 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R LPR AGH KG+ +V A G++ LT+FAFS NWRR
Sbjct: 16 PQHVAIIMDGNGRWATRRHLPRTAGHAKGVRAVRRVVEACGRHGVRYLTLFAFSSENWRR 75
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L L++ L++ +++ V+G+ + + + +++ A+D+TR N L
Sbjct: 76 PADEVSLLMRLFVQALEREVGKLQEQGVRLHVVGDLSAFEPRLQELIQAAQDRTRHNDRL 135
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L IA NY R ++ +A + + Q D+D S +A+YL + P+PDL IRTGG
Sbjct: 136 HLTIAANYGGRWDVLQATRAMLQAEPDLVGRLQDIDESRMAQYLSMAWAPEPDLFIRTGG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FL+WQ+AY+E F YWPDF E A + Y R+RRFG S +
Sbjct: 196 EQRISNFLIWQLAYTELYFSDAYWPDFGAEQLEAAFDWYRGRERRFGRTSAQ 247
>gi|189218030|ref|YP_001938672.1| Undecaprenyl pyrophosphate synthase [Methylacidiphilum infernorum
V4]
gi|189184888|gb|ACD82073.1| Undecaprenyl pyrophosphate synthase [Methylacidiphilum infernorum
V4]
Length = 260
Score = 206 bits (524), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/236 (44%), Positives = 140/236 (59%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S + P+H+ IIMDGNGRWA R L R GHR+G+ E+V A EVGI LT++ FS++
Sbjct: 24 SRNIPEHVAIIMDGNGRWAEKRNLARIEGHREGLNAAKEVVQTALEVGIHYLTLYVFSVD 83
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW+RP EI L+++ + FL K L + IK+ IG R L + L +T
Sbjct: 84 NWKRPYFEIKALMEMFEDFLSKNEEELIEKGIKLVTIGRRTDLPKGLQKQLLSTCKKTES 143
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N L L +A +Y SR +I A+K I + G V D++ L +L TS PDPDL+I
Sbjct: 144 NFKLVLTLALSYGSRLDILDAVKEIAKKALHGQVKISDINEELFKSHLSTSFCPDPDLLI 203
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE RLS+FLLW+ +Y+EF F YWPDF R+ F AL + R RRFG ++ K
Sbjct: 204 RTSGEMRLSNFLLWESSYTEFYFTTTYWPDFRRQEFLEALGTFAKRQRRFGQVAVK 259
>gi|260775281|ref|ZP_05884178.1| undecaprenyl pyrophosphate synthetase [Vibrio coralliilyticus ATCC
BAA-450]
gi|260608462|gb|EEX34627.1| undecaprenyl pyrophosphate synthetase [Vibrio coralliilyticus ATCC
BAA-450]
Length = 251
Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 96/229 (41%), Positives = 146/229 (63%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P HI IIMDGNGRWA A+G PR GH+ G+ + ++ +A++GIK +T+FAFS NW
Sbjct: 10 SLPKHIAIIMDGNGRWAKAQGKPRVFGHKNGVAAVRKAISTSAKLGIKAITLFAFSSENW 69
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RRP E+ L++L + L L KNN+++RVIG+ ++ + + +AE T N+
Sbjct: 70 RRPEEEVGVLMELFITVLSTEVKKLHKNNLRLRVIGDTSRFNERLQKKIAQAEALTADNS 129
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
G+ + IA NY + +I A K I + + G + + ++D +LI ++L SD+P+ DL+IRT
Sbjct: 130 GMVINIAANYGGKWDIVEATKVIAEKVSKGELSAGEIDEALITQHLTMSDLPEVDLLIRT 189
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
GE R+S+F+LWQ+AY+E F P YWP+F A+ + R+RRFG
Sbjct: 190 SGECRISNFMLWQMAYAEMYFTPIYWPEFDENSLIEAVTWFVNRERRFG 238
>gi|327399654|ref|YP_004340523.1| Undecaprenyl pyrophosphate synthase [Hippea maritima DSM 10411]
gi|327182283|gb|AEA34464.1| Undecaprenyl pyrophosphate synthase [Hippea maritima DSM 10411]
Length = 234
Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 106/234 (45%), Positives = 149/234 (63%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
MS + P H+ IIMDGNGRWA +G R GH G V ++IV AA E G+K LT++ FS
Sbjct: 1 MSENFPYHVAIIMDGNGRWAKQQGKNRTYGHYIGSNVVDKIVEAAIEEGVKYLTLYTFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP SEI L+ L+K L K + N+K VIG+ +D+I + + + T
Sbjct: 61 ENWKRPKSEIRFLMFLLKKQLIKKRELFLRKNVKFNVIGDIDVFEDEIKENINQLIEITE 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
NTGL + +A NY R EI RA K I + ++ G + ++D L A++L T D+PD DL+
Sbjct: 121 NNTGLRVSLALNYGGRYEIVRASKEIARKVKEGLIEPDEIDEKLFAQHLYTYDMPDVDLL 180
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRTGGEKR+S+FLLWQ++Y EFVF ++WP+FS + A+ ++ R R+FGGL
Sbjct: 181 IRTGGEKRVSNFLLWQISYGEFVFFDKHWPEFSSDDLKVAIEEFKRRKRKFGGL 234
>gi|307718991|ref|YP_003874523.1| undecaprenyl pyrophosphate synthetase [Spirochaeta thermophila DSM
6192]
gi|306532716|gb|ADN02250.1| undecaprenyl pyrophosphate synthetase [Spirochaeta thermophila DSM
6192]
Length = 232
Score = 206 bits (523), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 108/234 (46%), Positives = 142/234 (60%), Gaps = 5/234 (2%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+S P HIGIIMDGNGRWA RGLPR GH +G++ +V AAAE GI L+++ FS
Sbjct: 4 GTSLPRHIGIIMDGNGRWATRRGLPRYKGHEEGLKATKRVVKAAAERGIPYLSLYTFSTE 63
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW+R E+S L+ L++ +LKK F ++ I++ GN L +I L + T
Sbjct: 64 NWKRAQEEVSFLMGLVRRYLKKEFDFYREYGIRIVHSGNLEGLPREIRRDLLDVMRDTAS 123
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
TGL L IA NY RDEI RA+K +E G +S +YLD ++PDPDL+I
Sbjct: 124 FTGLTLNIALNYGGRDEILRAMKRW---LEEGGAPELTEES--FRRYLDVPELPDPDLVI 178
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RT GE+RLS+FL+WQ AY+E+ F P WPDFS F AL Y R R+FGG +
Sbjct: 179 RTAGEQRLSNFLIWQAAYAEYYFTPVLWPDFSERDFDEALQDYASRTRKFGGTA 232
>gi|315186477|gb|EFU20237.1| Undecaprenyl pyrophosphate synthetase [Spirochaeta thermophila DSM
6578]
Length = 232
Score = 206 bits (523), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 107/235 (45%), Positives = 143/235 (60%), Gaps = 5/235 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ +S P HIGIIMDGNGRWA RGLPR GH +G++ +V AAAE GI L+++ FS
Sbjct: 3 IGTSLPRHIGIIMDGNGRWATRRGLPRYKGHEEGLKATKRVVKAAAERGIPYLSLYTFST 62
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+R E+S L+ L++ +LKK F ++ I++ GN L +I L + T
Sbjct: 63 ENWKRAQEEVSFLMGLVRRYLKKEFDFYREYGIRIVHSGNLEGLPREIRRDLLDVIRDTA 122
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
TGL L IA NY RDEI RA+K + E G ++ +YLD ++PDPDL+
Sbjct: 123 SFTGLTLNIALNYGGRDEILRAMKRWLE--EGG---GQELTEESFRRYLDVPELPDPDLV 177
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IRT GE+RLS+FL+WQ AY+E+ F P WPDFS F AL Y R R+FGG +
Sbjct: 178 IRTAGEQRLSNFLIWQAAYAEYYFTPVLWPDFSERDFDEALRDYASRTRKFGGTA 232
>gi|73541566|ref|YP_296086.1| undecaprenyl pyrophosphate synthetase [Ralstonia eutropha JMP134]
gi|72118979|gb|AAZ61242.1| Undecaprenyl pyrophosphate synthetase [Ralstonia eutropha JMP134]
Length = 261
Score = 206 bits (523), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 100/236 (42%), Positives = 147/236 (62%), Gaps = 2/236 (0%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S+ P H+ IIMDGNGRWA R LPR AGH +G++ +V A+A G++ LT+FAFS
Sbjct: 18 STYVPRHVAIIMDGNGRWATQRHLPRVAGHSRGLDAVRAVVEASAARGVQFLTLFAFSSE 77
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+S L++L + L++ + N+I++RV+G+ I ++K+AE +T
Sbjct: 78 NWRRPADEVSFLMRLFMTALRREVVKMHANSIRLRVVGDLGRFSPRIQQLIKDAEARTAG 137
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTG+ + IA NY R ++ +A++ + S + +D S++A +L S P+PDL I
Sbjct: 138 NTGMTVTIAANYGGRWDLLQAMRKMLA--RSPMLDPESIDESVLAPHLAMSYAPEPDLFI 195
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE+R+S+FLLWQ+AYSE F +WPDF A Y R+RRFG S +
Sbjct: 196 RTGGEQRISNFLLWQLAYSELYFTDVFWPDFDAAELDKAFASYRQRERRFGRTSAQ 251
>gi|257894709|ref|ZP_05674362.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium
1,231,408]
gi|257831088|gb|EEV57695.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium
1,231,408]
Length = 237
Score = 206 bits (523), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 101/228 (44%), Positives = 142/228 (62%), Gaps = 4/228 (1%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA R LPR AGH++G+E ++ A+ +G+K LT++AFS NW+RP E+S
Sbjct: 1 MDGNGRWAQNRRLPRVAGHKEGMETVKKVTKKASRLGVKVLTLYAFSTENWKRPKDEVSF 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L F L K N+KV V+G L + ++ A +QT+ NTG+ L A N
Sbjct: 61 LMQLPVDFFDTFVPELIKENVKVHVMGYENVLPEHTQDAVRRAIEQTKNNTGMVLNFALN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLIIRTGGEKR 193
Y SR EI A++ I +++ G + + ++D LIAK+L T +P DP+L+IRT GE+R
Sbjct: 121 YGSRAEIVTAVQEIAEEVAKGEIHAEEIDDELIAKHLMTGFLPKELQDPELMIRTSGEER 180
Query: 194 LSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
+S+FLLWQ+AYSE F WPDF A+ Y RDRRFGG+ K
Sbjct: 181 ISNFLLWQIAYSELYFTKALWPDFDGAHLEEAIASYQNRDRRFGGVKK 228
>gi|217964538|ref|YP_002350216.1| di-trans,poly-cis-decaprenylcistransferase [Listeria monocytogenes
HCC23]
gi|217333808|gb|ACK39602.1| di-trans,poly-cis-decaprenylcistransferase [Listeria monocytogenes
HCC23]
gi|307570896|emb|CAR84075.1| undecaprenyl diphosphate synthase [Listeria monocytogenes L99]
Length = 253
Score = 206 bits (523), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 101/229 (44%), Positives = 141/229 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R LPR AGH++G++V + A +GI LT++AFS NW+R
Sbjct: 25 PRHVAIIMDGNGRWAKKRFLPRIAGHKEGMDVVKRVTRYANAMGIDVLTLYAFSTENWKR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL F L + N++V V+G R +L D + +++A T TGL
Sbjct: 85 PTDEVDFLMKLPVEFFDSFVPELIEENVRVNVMGYRENLPDHTMRAVEKAIADTAHCTGL 144
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY R EI A K +++E + ++ ++ +L +S + DPDL+IRT G
Sbjct: 145 TLNFALNYGGRSEIITAAKEAMKELEREGKSAENLTEEMLNDHLMSSGLGDPDLLIRTSG 204
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+F+LWQ+AYSEF F +WPDFS+E F A+ +Y R RRFGGL
Sbjct: 205 ELRLSNFMLWQLAYSEFYFTDTHWPDFSKEDFLQAIIEYQNRSRRFGGL 253
>gi|313638110|gb|EFS03375.1| di-trans,poly-cis-decaprenylcistransferase [Listeria seeligeri FSL
S4-171]
Length = 252
Score = 206 bits (523), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 102/229 (44%), Positives = 141/229 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R LPR AGH++G++V + A +GI LT++AFS NW+R
Sbjct: 24 PRHVAIIMDGNGRWAKKRFLPRIAGHKEGMDVVKRVTRYANAIGIDVLTLYAFSTENWKR 83
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL F L + N++V V+G R +L D + +++A T TGL
Sbjct: 84 PTDEVDFLMKLPVEFFDSFVPELIEENVRVNVMGYRENLPDHTMRAVEKAIADTAHCTGL 143
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY R EI A K +++ S D+ +++ +L +S + DPDL+IRT G
Sbjct: 144 TLNFALNYGGRSEIITAAKEAVKELVSEGKSVDDLTEDMLSNHLMSSGLGDPDLLIRTSG 203
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+F+LWQ+AYSEF F +WPDFS+E F A+ +Y R RRFGGL
Sbjct: 204 ELRLSNFMLWQLAYSEFYFTDTHWPDFSKEDFLQAIIEYQNRSRRFGGL 252
>gi|295426322|ref|ZP_06818981.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus
amylolyticus DSM 11664]
gi|295063995|gb|EFG54944.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus
amylolyticus DSM 11664]
Length = 244
Score = 206 bits (523), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 104/229 (45%), Positives = 145/229 (63%), Gaps = 3/229 (1%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+H+ IIMDGNGRWA R PR GHR+G++ I AA E+GIK LT++AFS NW RP
Sbjct: 9 NHLAIIMDGNGRWAKKRHQPRVFGHREGMDNVERITLAADELGIKVLTLYAFSTENWARP 68
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E++ L+ L F K +L +NN+KV ++G L +++ + +T NTGL
Sbjct: 69 KEEVAYLMNLPVRFFDKYMPTLMENNVKVNIMGYLDELPPKTYDIVQRSMAETANNTGLV 128
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS---DVPDPDLIIRT 188
L AFNY SR EI+ A+K + IE+G++ S D+ LI+K+L T+ DPDL+IRT
Sbjct: 129 LNFAFNYGSRREITSAMKELGGLIEAGALSSEDITEDLISKHLMTARFGPYSDPDLLIRT 188
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
GE+R+S+FLLWQ+AYSE F P+ WPDF+ + + Y R+RRFG
Sbjct: 189 SGEQRISNFLLWQIAYSELAFSPKAWPDFNEDDLKMFVENYQTRNRRFG 237
>gi|153839720|ref|ZP_01992387.1| undecaprenyl diphosphate synthase [Vibrio parahaemolyticus AQ3810]
gi|149746756|gb|EDM57744.1| undecaprenyl diphosphate synthase [Vibrio parahaemolyticus AQ3810]
Length = 251
Score = 206 bits (523), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 99/231 (42%), Positives = 148/231 (64%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S S P HI IIMDGNGRWA ++G PR GH+KG+ + VAAA+++GIK +T+FAFS
Sbjct: 8 SDSLPKHIAIIMDGNGRWAKSKGKPRVFGHKKGVNAVRKTVAAASKLGIKAMTLFAFSSE 67
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+ L++L + L L KNN+++RVIG+ + + + EAE+ T
Sbjct: 68 NWRRPEEEVGLLMELFITVLSSEVKKLHKNNLQLRVIGDTSRFSERLQKKIVEAENLTAS 127
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTG+ + IA NY + +I+ A K + +G + D++ LI ++L +D+P+ DL+I
Sbjct: 128 NTGMVINIAANYGGKWDITEAAKALALKARNGEIRVEDINEQLITEHLTMADLPEVDLLI 187
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE R+S+F+LWQ+AY+E PE+WP+F + A+ + R+RRFG
Sbjct: 188 RTSGECRISNFMLWQMAYAEMYLTPEFWPEFDEDSLVEAVTWFINRERRFG 238
>gi|83814114|ref|YP_445959.1| undecaprenyl diphosphate synthase [Salinibacter ruber DSM 13855]
gi|83755508|gb|ABC43621.1| undecaprenyl diphosphate synthase [Salinibacter ruber DSM 13855]
Length = 308
Score = 206 bits (523), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 95/227 (41%), Positives = 140/227 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IMDGNGRWA RG R GH +G+ ++ A AE+GI LT++ FS NW R
Sbjct: 68 PAHVACIMDGNGRWAQERGEARVVGHHEGVTSVRDVTEACAELGIDYLTLYTFSTENWER 127
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +EI+ L++L+ +K+ +L +N ++++ IG+ L L++ + T N +
Sbjct: 128 PDAEINALMELLVQTVKEERDTLMENGVRLQTIGDLSELPGSCQDALRQTKRDTAENDRM 187
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +YS R EI RA +++ +E G D+D++L + LDTS +PDPDL++RTGG
Sbjct: 188 TLTLALSYSGRWEIVRAARDLATKVEEGECSPDDIDAALFEEQLDTSGMPDPDLLVRTGG 247
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E RLS+FLLWQ AY+EF E+WP F R + ++ Y RDRRFG
Sbjct: 248 EFRLSNFLLWQSAYTEFYITDEFWPAFRRPQLYASIRSYQDRDRRFG 294
>gi|312796248|ref|YP_004029170.1| Undecaprenyl pyrophosphate synthetase [Burkholderia rhizoxinica HKI
454]
gi|312168023|emb|CBW75026.1| Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) [Burkholderia
rhizoxinica HKI 454]
Length = 280
Score = 206 bits (523), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 104/233 (44%), Positives = 148/233 (63%), Gaps = 3/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH KG++ IV A A G++ LT+FAFS NWRR
Sbjct: 37 PRHIAIIMDGNGRWAQRRRLPRVAGHTKGLDAVRTIVEACAARGVEFLTLFAFSSENWRR 96
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
PV E+S L++L S L++ L N I++ V+G+ + I +++ A+ +T NTGL
Sbjct: 97 PVDEVSFLMRLFISALEREIARLHTNGIRLHVVGDLSMFEPRIQELVRRAQAKTAANTGL 156
Query: 131 NLFIAFNYSSRDEISRAIKNIFQD-IESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L IA NY R +I +A + I Q +++G++ +VD + ++L + P+PDL IRTG
Sbjct: 157 TLTIAANYGGRWDILQATRKIAQQCVDAGAM--QNVDEASFTQHLAMAYAPEPDLFIRTG 214
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+R+S+FLLWQ+AY+E F +WPDF+ A+ Y R+RRFG S +
Sbjct: 215 GEQRVSNFLLWQLAYTELYFTDVFWPDFNDAELSKAIASYRERERRFGRTSAQ 267
>gi|237736216|ref|ZP_04566697.1| undecaprenyl pyrophosphate synthetase [Fusobacterium mortiferum
ATCC 9817]
gi|229421769|gb|EEO36816.1| undecaprenyl pyrophosphate synthetase [Fusobacterium mortiferum
ATCC 9817]
Length = 228
Score = 206 bits (523), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 103/234 (44%), Positives = 148/234 (63%), Gaps = 7/234 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M P+HI IIMDGNGRWA RGLPR GH++G +I+ AA++G+K LT++AFS
Sbjct: 1 MEKQIPNHIAIIMDGNGRWAKRRGLPRTFGHKEGAAALRKIITHAAKIGVKYLTVYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+R E+S L+ L KS++K ++ +NNI+ V G + ++ +L + +++++
Sbjct: 61 ENWKRSQEEVSALMFLFKSYIKNEEKNIMENNIRFMVSGRKDNVSSSLLEAIGNLQEKSK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
NTGL IAFNY R EI AI I ++SG ++ +KYL +D+PDP+L+
Sbjct: 121 NNTGLTFNIAFNYGGRAEIVDAINKI---LKSG---KESINEDEFSKYL-YNDIPDPELL 173
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRT GE R+S+FLLWQ+AYSE WPDF+ E A+ +N RDRRFGG+
Sbjct: 174 IRTSGELRISNFLLWQIAYSEIYITDTLWPDFNEEELDKAIEVFNKRDRRFGGV 227
>gi|310827161|ref|YP_003959518.1| di-trans-poly-cis-decaprenylcistransferase [Eubacterium limosum
KIST612]
gi|308738895|gb|ADO36555.1| di-trans-poly-cis-decaprenylcistransferase [Eubacterium limosum
KIST612]
Length = 238
Score = 206 bits (523), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 101/227 (44%), Positives = 141/227 (62%), Gaps = 4/227 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R PR GH G++ + V A+++GIK LT++AFS NW+R
Sbjct: 14 PVHIAIIMDGNGRWAKQRRKPRLFGHNAGMKALHNTVHLASDMGIKILTVYAFSTENWKR 73
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+++ + K L +N+++VR+IG + L D+ AE T+ N GL
Sbjct: 74 SQEEVDGLMRIAVEYFMKEIAELHRNHVQVRIIGEKSRLPKDVQKSADNAESLTKDNDGL 133
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY RDEI A++ I +E G+ DV +I+ +L T D+PDPD++IRTGG
Sbjct: 134 ILNVALNYGGRDEIVHAVREI---MEEGTAPG-DVTEEMISAHLYTRDLPDPDIMIRTGG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E RLS+FLLWQ AY+EF F +WPDF + F+ + Y R+RRFG
Sbjct: 190 ESRLSNFLLWQNAYTEFFFDDIWWPDFDDDAFYKLIEAYQQRNRRFG 236
>gi|289434596|ref|YP_003464468.1| undecaprenyl diphosphate synthase [Listeria seeligeri serovar 1/2b
str. SLCC3954]
gi|289170840|emb|CBH27382.1| undecaprenyl diphosphate synthase [Listeria seeligeri serovar 1/2b
str. SLCC3954]
Length = 252
Score = 206 bits (523), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 102/229 (44%), Positives = 141/229 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R LPR AGH++G++V + A +GI LT++AFS NW+R
Sbjct: 24 PRHVAIIMDGNGRWAKKRFLPRIAGHKEGMDVVKRVTRYANAIGIDVLTLYAFSTENWKR 83
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL F L + N++V V+G R +L D + +++A T TGL
Sbjct: 84 PTDEVDFLMKLPVEFFDSFVPELIEENVRVNVMGYRENLPDHTMRAVEKAIADTAHCTGL 143
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY R EI A K +++ S + D+ ++ +L +S + DPDL+IRT G
Sbjct: 144 TLNFALNYGGRSEIITAAKEAMKELVSVGKSADDLTEDMLNNHLMSSGLGDPDLLIRTSG 203
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+F+LWQ+AYSEF F +WPDFS+E F A+ +Y R RRFGGL
Sbjct: 204 ELRLSNFMLWQLAYSEFYFTDTHWPDFSKEDFLQAIIEYQNRSRRFGGL 252
>gi|16800420|ref|NP_470688.1| undecaprenyl pyrophosphate synthase [Listeria innocua Clip11262]
gi|42559857|sp|Q92C39|UPPS_LISIN RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|16413825|emb|CAC96583.1| lin1352 [Listeria innocua Clip11262]
Length = 252
Score = 206 bits (523), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 102/229 (44%), Positives = 140/229 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R LPR AGH++G++V + A +GI LT++AFS NW+R
Sbjct: 24 PRHVAIIMDGNGRWAKKRFLPRIAGHKEGMDVVKRVTRYANAIGIDVLTLYAFSTENWKR 83
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL F L + N++V V+G R +L + + +++A T TGL
Sbjct: 84 PTDEVDFLMKLPVEFFDSFVPELIEENVRVNVMGYRENLPEHTMRAVEKAIADTAHCTGL 143
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY R EI A K +++ S S D+ L+ +L + + DPDL+IRT G
Sbjct: 144 TLNFALNYGGRSEIITAAKEAMKELVSEGKTSEDLTEELLNDHLMSHGLGDPDLLIRTSG 203
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+F+LWQ+AYSEF F +WPDFS+E F A+ +Y R RRFGGL
Sbjct: 204 ELRLSNFMLWQLAYSEFYFTETHWPDFSKEDFLQAIIEYQNRSRRFGGL 252
>gi|113868030|ref|YP_726519.1| undecaprenyl pyrophosphate synthetase [Ralstonia eutropha H16]
gi|113526806|emb|CAJ93151.1| undecaprenyl pyrophosphate synthetase [Ralstonia eutropha H16]
Length = 256
Score = 206 bits (523), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 100/236 (42%), Positives = 146/236 (61%), Gaps = 2/236 (0%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+S P H+ IIMDGNGRWA R LPR AGH +G++ +V A+A G++ LT+FAFS
Sbjct: 13 TSYVPRHVAIIMDGNGRWATQRHLPRVAGHTRGLDAVRAVVEASAARGVQFLTLFAFSSE 72
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+S L++L L++ + NNI++RV+G+ I ++++AE +T
Sbjct: 73 NWRRPADEVSFLMRLFMMALRREVVKMHANNIRLRVVGDLARFSPRIQQLIRDAEARTAG 132
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTGL + IA NY R ++ +A++ + S + +D S++A +L + P+PDL I
Sbjct: 133 NTGLTVTIAANYGGRWDLLQAMRKMLA--RSPMLDPASIDESVLAPHLAMAYAPEPDLFI 190
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE+R+S+FLLWQ+AYSE F +WPDF A Y R+RRFG S +
Sbjct: 191 RTGGEQRISNFLLWQLAYSELYFTDVFWPDFDAAELDKAFASYRQRERRFGRTSAQ 246
>gi|113476060|ref|YP_722121.1| undecaprenyl pyrophosphate synthase [Trichodesmium erythraeum
IMS101]
gi|110167108|gb|ABG51648.1| Undecaprenyl pyrophosphate synthetase [Trichodesmium erythraeum
IMS101]
Length = 248
Score = 206 bits (523), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 95/227 (41%), Positives = 138/227 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA +RGLPR GHRKG+E +++ + G++ LT +AFS NW R
Sbjct: 20 PHHVAVIMDGNGRWAQSRGLPRIMGHRKGVETLKDLLRCCRDWGLEALTAYAFSSENWGR 79
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P+ E++ L+ L + L++ + ++++R +GN SL + +K + + TR N G+
Sbjct: 80 PLEEVNFLMTLFEKVLRQELQEIVAEDVQIRFVGNLSSLPVSLQAEIKHSMEMTRPNQGI 139
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY R EI A K I I+ G + +++ L KYL T+ + PDL+IRT G
Sbjct: 140 KFTVATNYGGRQEIVHACKAIGTQIQKGLLKPEEINEGLFEKYLYTAGISHPDLLIRTSG 199
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+FLLWQ+AYSE WPDF+R F AL Y R+RRFG
Sbjct: 200 EMRISNFLLWQMAYSEIYVTQTLWPDFNRYEFHRALCAYQKRERRFG 246
>gi|313619143|gb|EFR90929.1| di-trans,poly-cis-decaprenylcistransferase [Listeria innocua FSL
S4-378]
Length = 252
Score = 206 bits (523), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 102/229 (44%), Positives = 140/229 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R LPR AGH++G++V + A +GI LT++AFS NW+R
Sbjct: 24 PRHVAIIMDGNGRWAKKRFLPRIAGHKEGMDVVKRVTRYANAIGIDVLTLYAFSTENWKR 83
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL F L + N++V V+G R +L + + +++A T TGL
Sbjct: 84 PTDEVDFLMKLPVEFFDSFVPELIEENVRVNVMGYRENLPEHTMRAVEKAIADTAHCTGL 143
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY R EI A K +++ S S D+ L+ +L + + DPDL+IRT G
Sbjct: 144 TLNFALNYGGRSEIITAAKEAMKELVSEGKSSEDLTEELLNDHLMSHGLGDPDLLIRTSG 203
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+F+LWQ+AYSEF F +WPDFS+E F A+ +Y R RRFGGL
Sbjct: 204 ELRLSNFMLWQLAYSEFYFTETHWPDFSKEDFLQAIIEYQNRSRRFGGL 252
>gi|150026133|ref|YP_001296959.1| di-trans,poly-cis-decaprenylcistransferase [Flavobacterium
psychrophilum JIP02/86]
gi|149772674|emb|CAL44157.1| Di-trans,poly-cis-decaprenylcistransferase [Flavobacterium
psychrophilum JIP02/86]
Length = 246
Score = 205 bits (522), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 105/242 (43%), Positives = 153/242 (63%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + +S+ P H+ IIMDGNGRWA +G R GH G + IV A A++GI+NLT+
Sbjct: 3 LLKDINNSNLPKHLAIIMDGNGRWAKKQGFLRAIGHENGTKSVKVIVEACAKIGIENLTL 62
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW RP E+ L+K++ + LKK +L KNNIK+ IGN +L + L E
Sbjct: 63 YTFSTENWNRPKLEVDLLMKILINSLKKELATLVKNNIKLNSIGNLDNLPKSVQKELLEV 122
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
QT+ NT + L +A +Y SR+EI A+K I +++ + +D S++ K+L T ++P
Sbjct: 123 IAQTKNNTRMTLTLALSYGSREEIINAVKIISDKVKNNIISIDSIDDSILNKHLYTHNLP 182
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
D DL+IRT GE R+S+FLLWQ+AY+EF F WPDFS E + A+ Y R+RRFG S
Sbjct: 183 DVDLVIRTSGEHRISNFLLWQIAYAEFYFTDVLWPDFSEENLYEAIISYQKRERRFGKTS 242
Query: 241 KK 242
++
Sbjct: 243 EQ 244
>gi|160888036|ref|ZP_02069039.1| hypothetical protein BACUNI_00444 [Bacteroides uniformis ATCC 8492]
gi|317478582|ref|ZP_07937739.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides sp. 4_1_36]
gi|156862535|gb|EDO55966.1| hypothetical protein BACUNI_00444 [Bacteroides uniformis ATCC 8492]
gi|316905223|gb|EFV27020.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides sp. 4_1_36]
Length = 245
Score = 205 bits (522), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 142/232 (61%), Gaps = 2/232 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG R GH+ G E + I AA++G++ LT++ FS NW R
Sbjct: 14 PQHVAIIMDGNGRWAKQRGHERSYGHQAGAETVHVIAEEAAKLGVRYLTLYTFSTENWNR 73
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L+ +++ + KNNI RVIG+ L ++ L T NTG+
Sbjct: 74 PSDEVAALMGLLFDSIEEE--TFMKNNISFRVIGDIEKLPANVQQRLNTCVAHTSHNTGM 131
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +YSSR EI+ A + I ++ G + +DS LI+++L T +PDPDL+IRTGG
Sbjct: 132 CLVLALSYSSRWEITEAARQIADLVQKGELKPEQIDSELISRHLTTHFMPDPDLLIRTGG 191
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E RLS+++LWQ AYSE F YWPDF E A+ Y R+RRFG S++
Sbjct: 192 ELRLSNYMLWQCAYSELYFCDTYWPDFREEELRKAICDYQKRERRFGKTSEQ 243
>gi|290893572|ref|ZP_06556555.1| undecaprenyl diphosphate synthase [Listeria monocytogenes FSL
J2-071]
gi|290556917|gb|EFD90448.1| undecaprenyl diphosphate synthase [Listeria monocytogenes FSL
J2-071]
gi|313608997|gb|EFR84737.1| di-trans,poly-cis-decaprenylcistransferase [Listeria monocytogenes
FSL F2-208]
Length = 252
Score = 205 bits (522), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 101/229 (44%), Positives = 141/229 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R LPR AGH++G++V + A +GI LT++AFS NW+R
Sbjct: 24 PRHVAIIMDGNGRWAKKRFLPRIAGHKEGMDVVKRVTRYANAMGIDVLTLYAFSTENWKR 83
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL F L + N++V V+G R +L D + +++A T TGL
Sbjct: 84 PTDEVDFLMKLPVEFFDSFVPELIEENVRVNVMGYRENLPDHTMRAVEKAIADTAHCTGL 143
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY R EI A K +++E + ++ ++ +L +S + DPDL+IRT G
Sbjct: 144 TLNFALNYGGRSEIITAAKEAMKELEREGKSAENLTEEMLNDHLMSSGLGDPDLLIRTSG 203
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+F+LWQ+AYSEF F +WPDFS+E F A+ +Y R RRFGGL
Sbjct: 204 ELRLSNFMLWQLAYSEFYFTDTHWPDFSKEDFLQAIIEYQNRSRRFGGL 252
>gi|259046788|ref|ZP_05737189.1| di-trans,poly-cis-decaprenylcistransferase [Granulicatella adiacens
ATCC 49175]
gi|259036556|gb|EEW37811.1| di-trans,poly-cis-decaprenylcistransferase [Granulicatella adiacens
ATCC 49175]
Length = 260
Score = 205 bits (522), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 101/242 (41%), Positives = 150/242 (61%), Gaps = 3/242 (1%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ S+ S + P HI +IMDGNGRWA R LPR AGH++G+ I AA ++G+K +T++
Sbjct: 19 IISLDSKNIPKHIAVIMDGNGRWAKKRNLPRIAGHKEGMSTVKRIAIAADDLGVKAMTLY 78
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E+S L+KL F L++ N+K+++IG L + ++ +A
Sbjct: 79 AFSTENWKRPTEEVSFLMKLPGDFFGTFMPELQERNMKIQLIGFIDELPESTKNIVLKAV 138
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT---SD 178
+ T+ NTG+ L A NY SR EI A K I ++ G + ++D ++ +L T D
Sbjct: 139 EDTKNNTGMVLTFALNYGSRAEIIEATKAISTLVKQGELEIENIDDAVFESHLQTHFLGD 198
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+ +PDL+IRT GE RLS+FLLWQ+AYSE+ F +WP+FS + A+ Y R RR+GG
Sbjct: 199 LQNPDLMIRTSGEVRLSNFLLWQLAYSEYYFTDIFWPEFSEKDLHKAIQTYQNRHRRYGG 258
Query: 239 LS 240
L+
Sbjct: 259 LA 260
>gi|301059180|ref|ZP_07200120.1| di-trans,poly-cis-decaprenylcistransferase [delta proteobacterium
NaphS2]
gi|300446728|gb|EFK10553.1| di-trans,poly-cis-decaprenylcistransferase [delta proteobacterium
NaphS2]
Length = 241
Score = 205 bits (522), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 99/229 (43%), Positives = 138/229 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA PR GHRKG E IV + ++GI+ LT++AFS NW+R
Sbjct: 10 PKHVAIIMDGNGRWAEKHAFPRVRGHRKGAESVRTIVTTSRKLGIEYLTLYAFSEENWKR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+KL+ SFLK+ +K N I++ VIG L VL E QT +
Sbjct: 70 PPHEVNALMKLLGSFLKRELKEMKDNGIRLNVIGRTHKLPATTREVLLETIAQTSHGGRM 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y R EI A++++ Q ++SG + D+ + L T +PDPDL+IRT G
Sbjct: 130 VLTLALSYGGRQEILDAVRSLAQKVKSGILDPEDITEDRFSGNLYTKGLPDPDLLIRTSG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+FLLWQ++YSE WPDF F +A+++Y RDRRFG +
Sbjct: 190 EYRISNFLLWQISYSEIYITTTLWPDFGEPEFLNAISEYQKRDRRFGAV 238
>gi|270295598|ref|ZP_06201799.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides sp. D20]
gi|270274845|gb|EFA20706.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides sp. D20]
Length = 244
Score = 205 bits (522), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 142/232 (61%), Gaps = 2/232 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG R GH+ G E + I AA++G++ LT++ FS NW R
Sbjct: 13 PQHVAIIMDGNGRWAKQRGHERSYGHQAGAETVHVIAEEAAKLGVRYLTLYTFSTENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L+ +++ + KNNI RVIG+ L ++ L T NTG+
Sbjct: 73 PSDEVAALMGLLFDSIEEE--TFMKNNISFRVIGDIEKLPANVQQRLNTCVAHTSHNTGM 130
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +YSSR EI+ A + I ++ G + +DS LI+++L T +PDPDL+IRTGG
Sbjct: 131 CLVLALSYSSRWEITEAARQIADLVQKGELKPEQIDSELISRHLTTHFMPDPDLLIRTGG 190
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E RLS+++LWQ AYSE F YWPDF E A+ Y R+RRFG S++
Sbjct: 191 ELRLSNYMLWQCAYSELYFCDTYWPDFREEELRKAICDYQKRERRFGKTSEQ 242
>gi|116670771|ref|YP_831704.1| undecaprenyl pyrophosphate synthetase [Arthrobacter sp. FB24]
gi|116610880|gb|ABK03604.1| Undecaprenyl pyrophosphate synthetase [Arthrobacter sp. FB24]
Length = 286
Score = 205 bits (522), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 98/228 (42%), Positives = 139/228 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I+MDGNGRWA RGLPR GH+ G ++VA A E+GIK +T++AFS NWRR
Sbjct: 38 PQHVAIVMDGNGRWANQRGLPRIEGHKAGEPALLDVVAGAIELGIKYVTVYAFSTENWRR 97
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ K L++ L + +++R G R L ++ L+EAE+ TR N+
Sbjct: 98 SPEEVRFLMGFNKDVLRRQRNQLDEWGVRIRWSGRRPRLWGSVIRELEEAEEYTRGNSTC 157
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R EI+ A+ I +D+ +G + + I KYLD D+PD DL +R+ G
Sbjct: 158 TLTMCVNYGGRAEIADAVSAIAEDVAAGRLKPGSITERTIQKYLDEPDLPDVDLFLRSSG 217
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+RLS+F+LWQ AY+EFVF+ WPD R + A+ Y RDRR+GG
Sbjct: 218 EQRLSNFMLWQSAYAEFVFMDTLWPDVDRRTLWDAVEIYAGRDRRYGG 265
>gi|307708101|ref|ZP_07644569.1| undecaprenyl diphosphate synthase [Streptococcus mitis NCTC 12261]
gi|307615886|gb|EFN95091.1| undecaprenyl diphosphate synthase [Streptococcus mitis NCTC 12261]
Length = 252
Score = 205 bits (522), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 105/238 (44%), Positives = 136/238 (57%), Gaps = 4/238 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ + P HIGIIMDGNGRWA R PR GH+ G+E + AA ++G+K +T++AFS
Sbjct: 15 VPTQVPAHIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQTVTKAANKLGVKVITVYAFST 74
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+ ++ L F L NN+K+++IG L L +AE+ T+
Sbjct: 75 ENWTRPDQEVKFIMNLPVEFYDNYVPELHANNVKIQMIGETERLPKQTFEALTKAEELTK 134
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----D 181
NTGL L A NY R EI++A+K I QD+ + D+ LI YL T +P D
Sbjct: 135 NNTGLILNFALNYGGRAEITQALKLISQDVLDAKINPGDITEELIGNYLFTQHLPKELRD 194
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDLIIRT GE RLS+FL WQ AYSE F WPDF A+ YN R RRFGG+
Sbjct: 195 PDLIIRTSGELRLSNFLPWQGAYSELYFTDTLWPDFDEAALQEAILAYNRRHRRFGGV 252
>gi|149374433|ref|ZP_01892207.1| undecaprenyl diphosphate synthase [Marinobacter algicola DG893]
gi|149361136|gb|EDM49586.1| undecaprenyl diphosphate synthase [Marinobacter algicola DG893]
Length = 256
Score = 205 bits (522), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 97/231 (41%), Positives = 141/231 (61%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ S P H+ IIMDGN RWA AR L AGH+ G++ +V A G++ LT+FAFS
Sbjct: 13 AGSRPRHVAIIMDGNNRWAKARRLKGVAGHKAGVKAVRSVVETCAREGVEVLTLFAFSSE 72
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+S L++L L++ L +N+I +R+IG+R + ++ ++ AE TR
Sbjct: 73 NWRRPEDEVSALMRLFLFALEREVKKLHRNDICLRIIGDRSAFSANLQEHMERAEALTRD 132
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NT + L IA NY +I++A + + + + SG + D+ LI +L D+P PDL+I
Sbjct: 133 NTRMTLVIAANYGGHWDITQASRRVAEKVRSGELAPSDITDDLIQHHLSIGDLPMPDLMI 192
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE+R+S+F+LW +AY+E F P YWPDF + AL Y R RRFG
Sbjct: 193 RTAGEQRISNFMLWHLAYTELYFSPVYWPDFQEQEMGQALQAYAGRKRRFG 243
>gi|294507870|ref|YP_003571928.1| Undecaprenyl pyrophosphate synthetase [Salinibacter ruber M8]
gi|294344198|emb|CBH24976.1| Undecaprenyl pyrophosphate synthetase [Salinibacter ruber M8]
Length = 312
Score = 205 bits (522), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 95/231 (41%), Positives = 141/231 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IMDGNGRWA RG R GH +G+ ++ A AE+GI LT++ FS NW R
Sbjct: 72 PAHVACIMDGNGRWAQERGEARVVGHHEGVTSVRDVTEACAELGIDYLTLYTFSTENWER 131
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +EI+ L++L+ +K+ +L +N ++++ IG+ L L++ + T N +
Sbjct: 132 PDAEINALMELLVQTVKEERDTLMENGVRLQTIGDLSELPGSCQDALRQTKRDTAENDRM 191
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +YS R EI RA + + +E G D+D++L + LDTS +PDPDL++RTGG
Sbjct: 192 TLTLALSYSGRWEIVRAARALATKVEEGECSPDDIDAALFEEQLDTSGMPDPDLLVRTGG 251
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E RLS+FLLWQ AY+EF E+WP F R + ++ Y RDRRFG + +
Sbjct: 252 EFRLSNFLLWQSAYTEFYITDEFWPAFRRPQLYASIRSYQDRDRRFGRIER 302
>gi|253999116|ref|YP_003051179.1| undecaprenyl diphosphate synthase [Methylovorus sp. SIP3-4]
gi|313201217|ref|YP_004039875.1| undecaprenyl diphosphate synthase [Methylovorus sp. MP688]
gi|253985795|gb|ACT50652.1| undecaprenyl diphosphate synthase [Methylovorus sp. SIP3-4]
gi|312440533|gb|ADQ84639.1| undecaprenyl diphosphate synthase [Methylovorus sp. MP688]
Length = 249
Score = 205 bits (521), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 104/236 (44%), Positives = 144/236 (61%), Gaps = 3/236 (1%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
++ P HI +IMDGNGRWA R LPR AGH++G+EV +IV A +G++ LT+FAFS
Sbjct: 14 TAEVPRHIAVIMDGNGRWAKKRFLPRVAGHKRGVEVVRDIVKQCASIGVEYLTLFAFSSE 73
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+S L+ L L++ L KNNI++ +IG+ D+ + + AE TR
Sbjct: 74 NWRRPQEEVSFLMGLFMEALQQEVSKLHKNNIRLVMIGDHSRFDESLREQIARAEALTRD 133
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTGL L IA NY R +I +A+ + E + + + +A YL P+PDL I
Sbjct: 134 NTGLTLTIAANYGGRWDILQAVNRL--QAEHPELAG-NYNEEHLAPYLSMHYAPEPDLFI 190
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE+R+S+FLLWQ+AYSE F WPDF F ++ Y R+RRFG S++
Sbjct: 191 RTGGEQRISNFLLWQLAYSELYFTDTLWPDFDSAAFELSIASYRQRERRFGRTSEQ 246
>gi|302760519|ref|XP_002963682.1| hypothetical protein SELMODRAFT_80505 [Selaginella moellendorffii]
gi|300168950|gb|EFJ35553.1| hypothetical protein SELMODRAFT_80505 [Selaginella moellendorffii]
Length = 236
Score = 205 bits (521), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 103/230 (44%), Positives = 145/230 (63%), Gaps = 3/230 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGN RWA RGL GH G+ EIVAA++ +GIK LT+FAFS NWRR
Sbjct: 2 PEHVAIIMDGNSRWAKLRGLATDRGHEAGVHALREIVAASSRLGIKILTVFAFSTENWRR 61
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EI L++L + + + ++ I V IG+ L + + + +++TR N GL
Sbjct: 62 PTIEIQFLMQLFERVISEDSMNIFTKGICVHFIGDLSRLPGTLRLLACQIQERTRHNKGL 121
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSS-LIAKYLDTSD--VPDPDLIIR 187
L + +YS R ++ +A K + +++ GSV ++D S L +K L T D + DPDL+IR
Sbjct: 122 KLVVGLSYSGRQDLVQACKAVAAEVQRGSVDLDEIDESKLESKLLTTWDEEISDPDLLIR 181
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
T GEKRLS+F+LWQ+AY+E VF+PE WPDF + AL +Y RDRRFG
Sbjct: 182 TSGEKRLSNFMLWQLAYTELVFVPELWPDFGENEYRVALAEYQERDRRFG 231
>gi|163753162|ref|ZP_02160286.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) [Kordia
algicida OT-1]
gi|161326894|gb|EDP98219.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) [Kordia
algicida OT-1]
Length = 246
Score = 205 bits (521), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 104/232 (44%), Positives = 147/232 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R GH G + + V A A +GIKNLT++AFS NW R
Sbjct: 13 PQHLAIIMDGNGRWAKQKGKLRVFGHENGSKAVKQTVEACARLGIKNLTLYAFSTENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L+ S LKK L KNNIK++ IG+ +L L E ++T+ NT +
Sbjct: 73 PKLEVEALMRLLVSSLKKEQKLLLKNNIKLQAIGSLETLPKKAKKELFEVIEKTKDNTHM 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y SR+EI A+K I +++ + +D S+I ++L T ++PD DL+IRT G
Sbjct: 133 TLTLALSYGSREEIKNAVKEICHKVKNNIISLETIDESIINQHLYTQNLPDVDLLIRTSG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AY+E F WPDFS+E + AL Y R+RRFG S++
Sbjct: 193 EHRISNFLLWQIAYAELYFTNVLWPDFSKEHLYEALINYQNRERRFGKTSEQ 244
>gi|289548345|ref|YP_003473333.1| undecaprenyl diphosphate synthase [Thermocrinis albus DSM 14484]
gi|289181962|gb|ADC89206.1| undecaprenyl diphosphate synthase [Thermocrinis albus DSM 14484]
Length = 230
Score = 205 bits (521), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 97/229 (42%), Positives = 141/229 (61%), Gaps = 6/229 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA R LPR AGH +G++ EIV A++GI+ L++F FS NW+R
Sbjct: 7 PEHVAIIMDGNGRWAKERNLPRIAGHYEGVKRAEEIVDFCADLGIRYLSLFTFSTENWKR 66
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L L + +LK+ LK+ +++V IG R + ++ + E +T +
Sbjct: 67 PAEEVAALFDLFERYLKEKRQELKEKSVRVIFIGRRDRIPMSLVEEMHRTEKETACGHRI 126
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ +A +Y RD+I RA+ ++ +VD S + LD D+PDPDL+IRTGG
Sbjct: 127 TVILAVDYGGRDDIVRAVNHLLHQ------RVQEVDESTFRQALDLRDLPDPDLLIRTGG 180
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
EKR+S+F+LW +AY+E F YWPDF RE F AL Y R+RRFG +
Sbjct: 181 EKRISNFMLWNLAYTELYFTEVYWPDFGREEFVKALEDYANRERRFGAV 229
>gi|257869601|ref|ZP_05649254.1| undecaprenyl pyrophosphate synthetase [Enterococcus gallinarum EG2]
gi|257803765|gb|EEV32587.1| undecaprenyl pyrophosphate synthetase [Enterococcus gallinarum EG2]
Length = 265
Score = 205 bits (521), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 101/236 (42%), Positives = 145/236 (61%), Gaps = 5/236 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH++G+E I A+ +G+K LT++AFS NW+R
Sbjct: 27 PQHIAIIMDGNGRWAQNRRLPRVAGHKEGMETVKTITTHASRLGVKVLTLYAFSTENWKR 86
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L F L K N+KV V+G L + A +QT+ NTG+
Sbjct: 87 PNEEVDYLMQLPVDFFDTFVPELIKENVKVHVMGFTEYLPAHTQDAVNRAIEQTKENTGM 146
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDI----ESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
L A NY SR E+ +AI+ +++++ E+ + +D L+ +L + + DP+L+I
Sbjct: 147 VLNFALNYGSRAEMLQAIQKLYEELDHTQETVEITEEMMDQHLMTGFLPAA-LRDPELVI 205
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE+R+S+FLLWQ+AYSE F WPDF +L A+ + R+RRFGGL+KK
Sbjct: 206 RTSGEERISNFLLWQIAYSELFFTKALWPDFDAQLLEAAIGSFQQRNRRFGGLNKK 261
>gi|254508675|ref|ZP_05120790.1| undecaprenyl pyrophosphate synthetase 1 [Vibrio parahaemolyticus
16]
gi|219548432|gb|EED25442.1| undecaprenyl pyrophosphate synthetase 1 [Vibrio parahaemolyticus
16]
Length = 251
Score = 205 bits (521), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 93/227 (40%), Positives = 145/227 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA A+G PR GH+ G+ + ++ +A++GIK +T+FAFS NWRR
Sbjct: 12 PQHIAIIMDGNGRWAKAQGKPRVFGHKNGVAAVRKAISTSAKLGIKAITLFAFSSENWRR 71
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L + L L KNN+++RVIG+ +D + + +AE+ T NTG+
Sbjct: 72 PEEEVGVLMELFITVLSTEIKKLHKNNLRLRVIGDTARFNDRLRKKIAQAEELTANNTGM 131
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ IA NY + +I +A K + + +G + + ++ ++ ++L SD+P+ DL+IRT G
Sbjct: 132 VVNIAANYGGKWDIMQATKALANKVANGELQADEITEEMMTQHLTMSDLPEVDLMIRTSG 191
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+F+LWQ+AY+E F P YWP+F A+ + R+RRFG
Sbjct: 192 ECRISNFMLWQMAYAEMYFTPIYWPEFDENSLVEAVTWFVNRERRFG 238
>gi|156743851|ref|YP_001433980.1| undecaprenyl diphosphate synthase [Roseiflexus castenholzii DSM
13941]
gi|156235179|gb|ABU59962.1| undecaprenyl diphosphate synthase [Roseiflexus castenholzii DSM
13941]
Length = 236
Score = 205 bits (521), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 144/232 (62%), Gaps = 4/232 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGHR G E IV AE G++ LT++AFS NW R
Sbjct: 8 PRHIAIIMDGNGRWARQRHLPRLAGHRAGTENIRRIVTECAEQGVQYLTLYAFSTENWSR 67
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L++++ F+ + +L + ++R +G ++ ++ + +A + TR NT +
Sbjct: 68 PSAEVDGLMRILSDFIDRETINLHREGARLRHLGRLDNISAELRQKILDAIELTRHNTRI 127
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +AFNY R +I A++ + + V + DV +I+ +L T +PDPDLIIRT G
Sbjct: 128 TLAVAFNYGGRADIVDAVRELI----ALGVNADDVTEKMISDHLSTRGMPDPDLIIRTSG 183
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E RLS+FL+WQ AYSE+ YWPDFS E A++ Y R RRFGGLS++
Sbjct: 184 EWRLSNFLIWQAAYSEYWTTSVYWPDFSPEHLRQAIHDYGQRQRRFGGLSEE 235
>gi|323526484|ref|YP_004228637.1| undecaprenyl diphosphate synthase [Burkholderia sp. CCGE1001]
gi|323383486|gb|ADX55577.1| undecaprenyl diphosphate synthase [Burkholderia sp. CCGE1001]
Length = 260
Score = 205 bits (521), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 102/233 (43%), Positives = 144/233 (61%), Gaps = 3/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH +G++ V A A G++ LT+FAFS NWRR
Sbjct: 17 PRHIAIIMDGNGRWATQRRLPRVAGHTRGVDAVRATVEACARQGVEYLTLFAFSSENWRR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L + L++ L N I++RV+G+ D I +++ AE +T NT L
Sbjct: 77 PNDEVSFLMRLFVTALEREIGKLHANGIRLRVVGDLERFDTRIRDLIRRAETKTARNTRL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L IA NY R +I +A + + Q ++G +V+ A++L + P+PDL IRTG
Sbjct: 137 TLTIAANYGGRWDIMQATRKLVEQAAQTGEAV--EVNEESFAEHLSMAYAPEPDLFIRTG 194
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+R+S+FLLWQ+AY+EF F +WPDF + A+ Y R+RRFG S +
Sbjct: 195 GERRVSNFLLWQLAYTEFYFTDTFWPDFDADALGRAIASYGERERRFGRTSAQ 247
>gi|229513898|ref|ZP_04403360.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae TMA 21]
gi|229522202|ref|ZP_04411619.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae TM 11079-80]
gi|229528741|ref|ZP_04418131.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae 12129(1)]
gi|229332515|gb|EEN98001.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae 12129(1)]
gi|229341127|gb|EEO06132.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae TM 11079-80]
gi|229349079|gb|EEO14036.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae TMA 21]
gi|327484772|gb|AEA79179.1| Undecaprenyl pyrophosphate synthetase [Vibrio cholerae LMA3894-4]
Length = 250
Score = 204 bits (520), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 143/227 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA A+G PR GH+ G+ + ++ +A +GIK +T+FAFS NWRR
Sbjct: 12 PKHIAVIMDGNGRWAKAQGKPRVFGHKNGVAAVRKTISTSARLGIKAVTLFAFSSENWRR 71
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L + L L KNN+++RVIG++ + + + +AE T NTG+
Sbjct: 72 PEEEVGVLMELFMTVLSTEIKKLHKNNLRLRVIGDKSRFSERLQTKIAQAEQLTASNTGM 131
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ IA NY + +I +A + + + + G + D+D ++ ++L +D+PD DL+IRT G
Sbjct: 132 VVNIAANYGGQWDILQATQALAEKVTQGELQPSDIDEAVFKQHLTMADLPDVDLLIRTSG 191
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+F+LWQ+AY+E F P +WP+F A+ + R+RRFG
Sbjct: 192 ECRISNFMLWQLAYAEMYFTPVFWPEFDENCLIEAVTWFVNRERRFG 238
>gi|153803008|ref|ZP_01957594.1| undecaprenyl diphosphate synthase [Vibrio cholerae MZO-3]
gi|297580899|ref|ZP_06942824.1| undecaprenyl diphosphate synthase [Vibrio cholerae RC385]
gi|124121451|gb|EAY40194.1| undecaprenyl diphosphate synthase [Vibrio cholerae MZO-3]
gi|297534725|gb|EFH73561.1| undecaprenyl diphosphate synthase [Vibrio cholerae RC385]
Length = 256
Score = 204 bits (520), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 143/227 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA A+G PR GH+ G+ + ++ +A +GIK +T+FAFS NWRR
Sbjct: 18 PKHIAVIMDGNGRWAKAQGKPRVFGHKNGVAAVRKTISTSARLGIKAVTLFAFSSENWRR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L + L L KNN+++RVIG++ + + + +AE T NTG+
Sbjct: 78 PEEEVGVLMELFMTVLSTEIKKLHKNNLRLRVIGDKSRFSERLQTKIAQAEQLTASNTGM 137
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ IA NY + +I +A + + + + G + D+D ++ ++L +D+PD DL+IRT G
Sbjct: 138 VVNIAANYGGQWDILQATQALAEKVTQGELQPSDIDEAVFKQHLTMADLPDVDLLIRTSG 197
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+F+LWQ+AY+E F P +WP+F A+ + R+RRFG
Sbjct: 198 ECRISNFMLWQLAYAEMYFTPVFWPEFDENCLIEAVTWFVNRERRFG 244
>gi|78187604|ref|YP_375647.1| di-trans-poly-cis-decaprenylcistransferase [Chlorobium luteolum DSM
273]
gi|78167506|gb|ABB24604.1| Undecaprenyl pyrophosphate synthetase [Chlorobium luteolum DSM 273]
Length = 291
Score = 204 bits (520), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 98/232 (42%), Positives = 144/232 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA +G R GH G+ ++V A+ ++G+ LT+F FS NW+R
Sbjct: 40 PSHIAIIMDGNGRWARLKGKTRIEGHAAGVSSVRDVVEASIQLGVPYLTLFTFSTENWKR 99
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++LI L + +L NN+++ VIGN L D + VL+ + T+ N+ L
Sbjct: 100 PEKEVSALMQLIVRILARETRALHDNNVRLNVIGNTALLPDKVRTVLENTIEITKNNSRL 159
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA +YS + ++++A +I +D+++G + V LI L T+ +PDP+LIIRT G
Sbjct: 160 VLNIALSYSGKWDVTQACASIARDVKAGLLDPPAVTEQLIESRLSTASMPDPELIIRTSG 219
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+F++WQ AYSE F YWPDF R + A+ Y R+RRFG S +
Sbjct: 220 EFRISNFMIWQSAYSEIYFTNTYWPDFRRAQLYEAIRDYQGRERRFGQTSDQ 271
>gi|284801700|ref|YP_003413565.1| hypothetical protein LM5578_1454 [Listeria monocytogenes 08-5578]
gi|284994842|ref|YP_003416610.1| hypothetical protein LM5923_1407 [Listeria monocytogenes 08-5923]
gi|284057262|gb|ADB68203.1| hypothetical protein LM5578_1454 [Listeria monocytogenes 08-5578]
gi|284060309|gb|ADB71248.1| hypothetical protein LM5923_1407 [Listeria monocytogenes 08-5923]
Length = 253
Score = 204 bits (520), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 102/229 (44%), Positives = 140/229 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R LPR AGH++G++V + A +GI LT++AFS NW+R
Sbjct: 25 PRHVAIIMDGNGRWAKKRFLPRIAGHKEGMDVVKRVTRYANAIGIDVLTLYAFSTENWKR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL F L + N++V V+G R +L D + +++A T TGL
Sbjct: 85 PTDEVDFLMKLPVEFFDSFVPELIEENVRVNVMGYRENLPDHTMRAVEKAIADTAHCTGL 144
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY R EI A K +++E + D+ + +L +S + DPDL+IRT G
Sbjct: 145 TLNFALNYGGRSEIITAAKEAMKELELEGKSADDLTEEKLNDHLMSSGLGDPDLLIRTSG 204
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+F+LWQ+AYSEF F +WPDFS+E F A+ +Y R RRFGGL
Sbjct: 205 ELRLSNFMLWQLAYSEFYFTDTHWPDFSKEDFLQAIIEYQNRSRRFGGL 253
>gi|16803355|ref|NP_464840.1| undecaprenyl pyrophosphate synthase [Listeria monocytogenes EGD-e]
gi|224499897|ref|ZP_03668246.1| hypothetical protein LmonF1_09529 [Listeria monocytogenes Finland
1988]
gi|254828676|ref|ZP_05233363.1| undecaprenyl diphosphate synthase [Listeria monocytogenes FSL
N3-165]
gi|42559850|sp|Q8Y7G6|UPPS_LISMO RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|16410731|emb|CAC99393.1| lmo1315 [Listeria monocytogenes EGD-e]
gi|258601079|gb|EEW14404.1| undecaprenyl diphosphate synthase [Listeria monocytogenes FSL
N3-165]
Length = 252
Score = 204 bits (520), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 102/229 (44%), Positives = 140/229 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R LPR AGH++G++V + A +GI LT++AFS NW+R
Sbjct: 24 PRHVAIIMDGNGRWAKKRFLPRIAGHKEGMDVVKRVTRYANAIGIDVLTLYAFSTENWKR 83
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL F L + N++V V+G R +L D + +++A T TGL
Sbjct: 84 PTDEVDFLMKLPVEFFDSFVPELIEENVRVNVMGYRENLPDHTMRAVEKAIADTAHCTGL 143
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY R EI A K +++E + D+ + +L +S + DPDL+IRT G
Sbjct: 144 TLNFALNYGGRSEIITAAKEAMKELELEGKSADDLTEEKLNDHLMSSGLGDPDLLIRTSG 203
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+F+LWQ+AYSEF F +WPDFS+E F A+ +Y R RRFGGL
Sbjct: 204 ELRLSNFMLWQLAYSEFYFTDTHWPDFSKEDFLQAIIEYQNRSRRFGGL 252
>gi|331701340|ref|YP_004398299.1| Undecaprenyl pyrophosphate synthase [Lactobacillus buchneri NRRL
B-30929]
gi|329128683|gb|AEB73236.1| Undecaprenyl pyrophosphate synthase [Lactobacillus buchneri NRRL
B-30929]
Length = 256
Score = 204 bits (520), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 102/234 (43%), Positives = 143/234 (61%), Gaps = 7/234 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R LPR AGH++G+E I A+++G+K LT++AFS NW+R
Sbjct: 21 PAHVAIIMDGNGRWAQKRHLPRIAGHKRGMETVKTITKVASDLGVKVLTLYAFSTENWKR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L F L KNN++VRV+G + L + +A T TG+
Sbjct: 81 PHDEVIYLMGLPVKFFNDFVPDLVKNNVQVRVMGIKDQLPVQTQKAVNDAIKDTADCTGM 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESG-----SVCSHDVDSSLIAKYLDTSDVPDPDLI 185
L A NY SR +I A++ I + + SG + +D++L+ +L D+ DPDL+
Sbjct: 141 ILNFALNYGSRLDIRMAVQQIGRQVASGQLDPEQITDQTIDANLMTGFL--GDLADPDLL 198
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRT GE+R+S+FLLWQ+AYSE VF WPDF R +F + +Y RDRRFGG+
Sbjct: 199 IRTSGEERISNFLLWQIAYSELVFTDVLWPDFDRTVFEQMIMEYQQRDRRFGGI 252
>gi|119962993|ref|YP_947964.1| undecaprenyl diphosphate synthase [Arthrobacter aurescens TC1]
gi|119949852|gb|ABM08763.1| undecaprenyl diphosphate synthase [Arthrobacter aurescens TC1]
Length = 274
Score = 204 bits (520), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 98/228 (42%), Positives = 137/228 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I+MDGNGRWA RGLPR GH+ G +++A A E+GIK ++++AFS NWRR
Sbjct: 38 PQHVAIVMDGNGRWANQRGLPRIEGHKAGEPALLDVMAGAIELGIKYVSVYAFSTENWRR 97
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ K L++ L + +++R G R L ++ L+EAED TR N
Sbjct: 98 SPEEVRFLMGFNKDVLRRQRNQLDEWGVRIRWAGRRPRLWGSVIRELEEAEDYTRANDTC 157
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R EI+ A+ I D+ +G + V I +YLD D+PD DL +R+ G
Sbjct: 158 TLTMCVNYGGRAEIADAVSAIAHDVAAGRLKPGSVSEKTIQRYLDEPDLPDVDLFLRSSG 217
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+RLS+FLLWQ AY+EFVF+ WPD R + A+ Y RDRR+GG
Sbjct: 218 EQRLSNFLLWQSAYAEFVFMDTLWPDVDRRTLWDAVEIYAKRDRRYGG 265
>gi|118594909|ref|ZP_01552256.1| Undecaprenyl pyrophosphate synthase [Methylophilales bacterium
HTCC2181]
gi|118440687|gb|EAV47314.1| Undecaprenyl pyrophosphate synthase [Methylophilales bacterium
HTCC2181]
Length = 244
Score = 204 bits (520), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 105/229 (45%), Positives = 139/229 (60%), Gaps = 6/229 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
PDHI +IMDGNGRWA R LPR AGH KG E +IV + IK LT+F FS NW+R
Sbjct: 16 PDHIAVIMDGNGRWAKKRFLPRIAGHSKGTEAAEKIVKYCFKYHIKTLTLFTFSTENWQR 75
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L + + K SL KNNI +R IG++ +++ L+E E N GL
Sbjct: 76 PDEEVDGLLNLFEESIVKSRASLIKNNIAIRFIGDKKLFSEELQRKLQELEKTCSKNNGL 135
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L IA NY R EI RA +Q + G + + S + +LDT+ +P+ DL+IRTGG
Sbjct: 136 DLNIALNYGGRSEIVRAANTFYQKV--GKL----ITESELTNHLDTAGMPEVDLLIRTGG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
EKR+S+FLLWQ+AY+E F WPDFS E F AL + +R+FG L
Sbjct: 190 EKRVSNFLLWQIAYAELFFTNVLWPDFSEEHFVEALQWFQKTNRKFGKL 238
>gi|323497980|ref|ZP_08102989.1| undecaprenyl pyrophosphate synthase [Vibrio sinaloensis DSM 21326]
gi|323317025|gb|EGA70027.1| undecaprenyl pyrophosphate synthase [Vibrio sinaloensis DSM 21326]
Length = 251
Score = 204 bits (520), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 144/227 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA A+G PR GH+ G+ + ++ +A++GIK +T+FAFS NWRR
Sbjct: 12 PQHIAIIMDGNGRWAKAQGKPRVFGHKNGVAAVRKAISTSAKLGIKAITLFAFSSENWRR 71
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L + L L KNN+++RVIG+ +D + + +AE+ T N+G+
Sbjct: 72 PEEEVGVLMELFITVLSTEIKKLHKNNLRLRVIGDTSRFNDRLRKKIAQAEELTAGNSGM 131
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ IA NY + +I +A K + + G + + D+ +I ++L SD+P+ DL+IRT G
Sbjct: 132 VVNIAANYGGKWDIMQATKALAAKVAQGELQADDITEDMITQHLTMSDLPEVDLMIRTSG 191
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+F+LWQ+AY+E F P YWP+F A+ + R+RRFG
Sbjct: 192 ECRISNFMLWQMAYAEMYFTPIYWPEFDENSLVEAVTWFVNRERRFG 238
>gi|15902284|ref|NP_357834.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae R6]
gi|15457788|gb|AAK99044.1| Undecaprenyl diphosphate synthase [Streptococcus pneumoniae R6]
Length = 258
Score = 204 bits (520), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 105/238 (44%), Positives = 136/238 (57%), Gaps = 4/238 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ + P HIGIIMDGNGRWA R PR GH+ G+E + AA ++G+K +T++AFS
Sbjct: 21 VPTQVPAHIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQTVTKAANKLGVKVITVYAFST 80
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+ ++ L F L NN+K+++IG L L +AE+ T+
Sbjct: 81 ENWTRPDQEVKFIMNLPVEFYDNYVPELHANNVKIQMIGETDRLPKQTFEALTKAEELTK 140
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----D 181
NTGL L A NY R EI++A+K I QD+ + D+ LI YL T +P D
Sbjct: 141 NNTGLILNFALNYGGRAEITQALKLISQDVLDAKINPGDITEELIGNYLFTQHLPKDLRD 200
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDLIIRT GE RLS+FL WQ AYSE F WPDF A+ YN R RRFGG+
Sbjct: 201 PDLIIRTSGELRLSNFLPWQGAYSELYFTDTLWPDFDEAALQEAILAYNRRHRRFGGV 258
>gi|149176638|ref|ZP_01855250.1| undecaprenyl pyrophosphate synthetase [Planctomyces maris DSM 8797]
gi|148844517|gb|EDL58868.1| undecaprenyl pyrophosphate synthetase [Planctomyces maris DSM 8797]
Length = 250
Score = 204 bits (520), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 99/235 (42%), Positives = 147/235 (62%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ S P HI IIMDGNGRWA+ RG PR GHR+G+ +V + + I+ LT++ S
Sbjct: 14 LESQQLPRHIAIIMDGNGRWASRRGFPRIEGHRQGVNSVRTVVEESTRLEIEQLTLYCLS 73
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E++ L++L+K F+ + + NI+ IG R L D+L + + ++
Sbjct: 74 SENWKRPALELNLLMQLLKKFVIGEREEIMRQNIRFTTIGRRDDLPRDVLIEVDKTIRES 133
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NTG+ L +A NY SR EI A+K+I D+E G++ ++ +I+ +L TS +PDPDL
Sbjct: 134 QDNTGMQLCLALNYGSRSEIVDAVKSIVADVEQGNLKPEAINEEVISAHLYTSGMPDPDL 193
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE R+S+FLLWQ++Y+E YWPDF ++ AL + RDRRFGGL
Sbjct: 194 VIRTAGEMRVSNFLLWQISYAELWVTETYWPDFKVADYWQALRDFAARDRRFGGL 248
>gi|313896302|ref|ZP_07829855.1| di-trans,poly-cis-decaprenylcistransferase [Selenomonas sp. oral
taxon 137 str. F0430]
gi|312975101|gb|EFR40563.1| di-trans,poly-cis-decaprenylcistransferase [Selenomonas sp. oral
taxon 137 str. F0430]
Length = 262
Score = 204 bits (520), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 144/232 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I+MDGNGRWA A+GL R AGH G+ IV AA+++GI+ LT++AFS NW+R
Sbjct: 30 PHHLAIVMDGNGRWAKAQGLSRSAGHEAGVRTLKRIVRAASDMGIEVLTVYAFSTENWKR 89
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L SFL+K + + N+++ IG R D ++EAE+ NTGL
Sbjct: 90 PPIEVDFLMRLFDSFLQKEIEEMHRENVRIHFIGRRDRFGDRFRRRMQEAENLMANNTGL 149
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY +DEI RA ++ + + SG + D+D ++ + LDT+ P DL IRT G
Sbjct: 150 RFNVAVNYGGQDEILRAAHSLAERVASGQLTPKDIDETVFSNELDTAGDPPVDLFIRTSG 209
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+ RLS+FLLWQ AY+EF F WPDF+ + A+ + R RRFGGL+ +
Sbjct: 210 DLRLSNFLLWQSAYAEFYFTDTLWPDFTPDHLAAAVEDFAGRTRRFGGLTAE 261
>gi|253996533|ref|YP_003048597.1| undecaprenyl diphosphate synthase [Methylotenera mobilis JLW8]
gi|253983212|gb|ACT48070.1| undecaprenyl diphosphate synthase [Methylotenera mobilis JLW8]
Length = 252
Score = 204 bits (520), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 103/232 (44%), Positives = 143/232 (61%), Gaps = 3/232 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA R LPR AGH++G+E +IV E+ ++ LT+FAFS NWRR
Sbjct: 18 PKHVAVIMDGNGRWARKRFLPRIAGHKRGVETVRDIVKQCIELKVEYLTLFAFSSENWRR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L LK+ L +NNIK+ +IG+R D ++ ++ +E T NTGL
Sbjct: 78 PPEEVSFLMSLFMEALKREVNKLHQNNIKLIMIGDRSRFDSSLIEKIEASEQLTANNTGL 137
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R ++ +A+ N Q + S D + + YL + P+PDL IRTGG
Sbjct: 138 VLTIAANYGGRWDVLQAV-NKMQKAQPE--LSGAYDEAHLTPYLSMNYAPEPDLFIRTGG 194
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
EKR+S+FLLWQ+AY+E F WPDF+ F A+ Y R+RRFG S++
Sbjct: 195 EKRISNFLLWQLAYTELYFTDTLWPDFNEAAFKAAIQSYQQRERRFGRTSEQ 246
>gi|91784115|ref|YP_559321.1| undecaprenyl pyrophosphate synthetase [Burkholderia xenovorans
LB400]
gi|91688069|gb|ABE31269.1| Undecaprenyl pyrophosphate synthetase [Burkholderia xenovorans
LB400]
Length = 260
Score = 204 bits (520), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 143/233 (61%), Gaps = 3/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH +G++ V A A G++ LT+FAFS NWRR
Sbjct: 17 PRHIAIIMDGNGRWATQRRLPRVAGHTRGVDAVRAAVEACARQGVEYLTLFAFSSENWRR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L + L++ L N I++RV+G+ D I +++ AE +T NT L
Sbjct: 77 PNDEVSFLMRLFVTALEREIGKLHANGIRLRVVGDLSRFDTRIRDLIRRAETKTARNTRL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L IA NY R +I +A + + Q +G +V A++L + P+PDL IRTG
Sbjct: 137 TLTIAANYGGRWDIMQATRKLAEQSALAGKAV--EVTEESFAEHLSMAYAPEPDLFIRTG 194
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+R+S+FLLWQ+AY+EF F +WPDF + HA+ Y R+RRFG S +
Sbjct: 195 GERRVSNFLLWQLAYTEFYFTDTFWPDFDADALGHAIASYAERERRFGRTSAQ 247
>gi|15900195|ref|NP_344799.1| undecaprenyl pyrophosphate synthase [Streptococcus pneumoniae
TIGR4]
gi|111658325|ref|ZP_01409014.1| hypothetical protein SpneT_02000515 [Streptococcus pneumoniae
TIGR4]
gi|116515541|ref|YP_815761.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae D39]
gi|148983666|ref|ZP_01816985.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
SP3-BS71]
gi|148988001|ref|ZP_01819464.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
SP6-BS73]
gi|148994603|ref|ZP_01823745.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
SP9-BS68]
gi|148996685|ref|ZP_01824403.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
SP11-BS70]
gi|149011131|ref|ZP_01832436.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
SP19-BS75]
gi|168484643|ref|ZP_02709595.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae CDC1873-00]
gi|168489736|ref|ZP_02713935.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae SP195]
gi|168492216|ref|ZP_02716359.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae CDC0288-04]
gi|168493957|ref|ZP_02718100.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae CDC3059-06]
gi|168576312|ref|ZP_02722195.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae MLV-016]
gi|169833071|ref|YP_001693789.1| undecaprenyl pyrophosphate synthase [Streptococcus pneumoniae
Hungary19A-6]
gi|221231162|ref|YP_002510314.1| undecaprenyl pyrophosphate synthetase [Streptococcus pneumoniae
ATCC 700669]
gi|225853861|ref|YP_002735373.1| undecaprenyl pyrophosphate synthase [Streptococcus pneumoniae JJA]
gi|225856019|ref|YP_002737530.1| undecaprenyl pyrophosphate synthase [Streptococcus pneumoniae
P1031]
gi|225858111|ref|YP_002739621.1| undecaprenyl pyrophosphate synthase [Streptococcus pneumoniae
70585]
gi|225860298|ref|YP_002741807.1| undecaprenyl pyrophosphate synthase [Streptococcus pneumoniae
Taiwan19F-14]
gi|237649669|ref|ZP_04523921.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae CCRI
1974]
gi|237821369|ref|ZP_04597214.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae CCRI
1974M2]
gi|298229646|ref|ZP_06963327.1| undecaprenyl pyrophosphate synthase [Streptococcus pneumoniae str.
Canada MDR_19F]
gi|298256041|ref|ZP_06979627.1| undecaprenyl pyrophosphate synthase [Streptococcus pneumoniae str.
Canada MDR_19A]
gi|298502079|ref|YP_003724019.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
TCH8431/19A]
gi|307066939|ref|YP_003875905.1| Undecaprenyl pyrophosphate synthase [Streptococcus pneumoniae
AP200]
gi|307704116|ref|ZP_07641044.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus mitis
SK597]
gi|307709957|ref|ZP_07646404.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus mitis
SK564]
gi|42559976|sp|Q8DRB3|UPPS_STRR6 RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|42560007|sp|Q97SR4|UPPS_STRPN RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|14971731|gb|AAK74439.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae TIGR4]
gi|116076117|gb|ABJ53837.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae D39]
gi|147757260|gb|EDK64299.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
SP11-BS70]
gi|147764767|gb|EDK71697.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
SP19-BS75]
gi|147923813|gb|EDK74925.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
SP3-BS71]
gi|147926465|gb|EDK77538.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
SP6-BS73]
gi|147927133|gb|EDK78171.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
SP9-BS68]
gi|168995573|gb|ACA36185.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae Hungary19A-6]
gi|172042174|gb|EDT50220.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae CDC1873-00]
gi|183571829|gb|EDT92357.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae SP195]
gi|183573578|gb|EDT94106.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae CDC0288-04]
gi|183576180|gb|EDT96708.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae CDC3059-06]
gi|183577835|gb|EDT98363.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae MLV-016]
gi|220673622|emb|CAR68109.1| undecaprenyl pyrophosphate synthetase [Streptococcus pneumoniae
ATCC 700669]
gi|225722059|gb|ACO17913.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae 70585]
gi|225723062|gb|ACO18915.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae JJA]
gi|225725417|gb|ACO21269.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae P1031]
gi|225727833|gb|ACO23684.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae Taiwan19F-14]
gi|298237674|gb|ADI68805.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
TCH8431/19A]
gi|301793529|emb|CBW35904.1| undecaprenyl pyrophosphate synthetase [Streptococcus pneumoniae
INV104]
gi|301799404|emb|CBW31941.1| undecaprenyl pyrophosphate synthetase [Streptococcus pneumoniae
OXC141]
gi|301801202|emb|CBW33876.1| undecaprenyl pyrophosphate synthetase [Streptococcus pneumoniae
INV200]
gi|306408476|gb|ADM83903.1| Undecaprenyl pyrophosphate synthase [Streptococcus pneumoniae
AP200]
gi|307619328|gb|EFN98457.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus mitis
SK564]
gi|307622338|gb|EFO01347.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus mitis
SK597]
gi|327390678|gb|EGE89018.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae GA04375]
gi|332075926|gb|EGI86393.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae GA17570]
gi|332077563|gb|EGI88024.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae GA41301]
gi|332202175|gb|EGJ16244.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae GA41317]
gi|332203427|gb|EGJ17494.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae GA47368]
Length = 252
Score = 204 bits (520), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 105/238 (44%), Positives = 136/238 (57%), Gaps = 4/238 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ + P HIGIIMDGNGRWA R PR GH+ G+E + AA ++G+K +T++AFS
Sbjct: 15 VPTQVPAHIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQTVTKAANKLGVKVITVYAFST 74
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+ ++ L F L NN+K+++IG L L +AE+ T+
Sbjct: 75 ENWTRPDQEVKFIMNLPVEFYDNYVPELHANNVKIQMIGETDRLPKQTFEALTKAEELTK 134
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----D 181
NTGL L A NY R EI++A+K I QD+ + D+ LI YL T +P D
Sbjct: 135 NNTGLILNFALNYGGRAEITQALKLISQDVLDAKINPGDITEELIGNYLFTQHLPKDLRD 194
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDLIIRT GE RLS+FL WQ AYSE F WPDF A+ YN R RRFGG+
Sbjct: 195 PDLIIRTSGELRLSNFLPWQGAYSELYFTDTLWPDFDEAALQEAILAYNRRHRRFGGV 252
>gi|254556880|ref|YP_003063297.1| di-trans-poly-cis-decaprenylcistransferase [Lactobacillus plantarum
JDM1]
gi|254045807|gb|ACT62600.1| di-trans-poly-cis-decaprenylcistransferase [Lactobacillus plantarum
JDM1]
Length = 259
Score = 204 bits (520), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 101/233 (43%), Positives = 144/233 (61%), Gaps = 3/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA AR LPR AGH++G+ +I AA+++G+K LT++AFS NW+R
Sbjct: 24 PAHVAIIMDGNGRWAKARHLPRVAGHKEGMNTVKKITIAASDLGVKVLTLYAFSTENWKR 83
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L++L SF L KNN++V+V+G L + ++ A T+ G+
Sbjct: 84 PTDEVNYLMQLPVSFFDTFVPDLIKNNVRVQVMGYVDHLPEATQKAVQNAIADTKDCDGM 143
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP---DPDLIIR 187
L A NY SR EI ++ I Q ++ G + D+D + I L T+ + DPDL+IR
Sbjct: 144 VLNFALNYGSRAEIVTGVQKIAQQVQDGQLAVGDIDDATIDAALMTAPLAPYNDPDLLIR 203
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
T GE+R+S+FL+WQ+AYSE VF WPDF+ + + RDRRFGGLS
Sbjct: 204 TSGEERISNFLMWQIAYSELVFTDVKWPDFTAATLQACIADFQSRDRRFGGLS 256
>gi|332204268|gb|EGJ18333.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae GA47901]
Length = 252
Score = 204 bits (520), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 105/238 (44%), Positives = 136/238 (57%), Gaps = 4/238 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ + P HIGIIMDGNGRWA R PR GH+ G+E + AA ++G+K +T++AFS
Sbjct: 15 VPTQVPAHIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQTVTKAANKLGVKVITVYAFST 74
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+ ++ L F L NN+K+++IG L L +AE+ T+
Sbjct: 75 ENWTRPDQEVKFIMNLPVEFYDNYVPELHANNVKIQMIGETDRLPKQTFEALTKAEELTK 134
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----D 181
NTGL L A NY R EI++A+K I QD+ + D+ LI YL T +P D
Sbjct: 135 NNTGLILNFALNYGGRAEITQALKLISQDVLDAKINPGDITEELIGNYLFTQHLPKDLRD 194
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDLIIRT GE RLS+FL WQ AYSE F WPDF A+ YN R RRFGG+
Sbjct: 195 PDLIIRTSGELRLSNFLPWQGAYSELYFTDTLWPDFDEAALQEAILAYNRRHRRFGGV 252
>gi|189464291|ref|ZP_03013076.1| hypothetical protein BACINT_00632 [Bacteroides intestinalis DSM
17393]
gi|189438081|gb|EDV07066.1| hypothetical protein BACINT_00632 [Bacteroides intestinalis DSM
17393]
Length = 244
Score = 204 bits (520), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 101/235 (42%), Positives = 142/235 (60%), Gaps = 2/235 (0%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P H+ IIMDGNGRWA RG R GH+ G E + I AA +GI+ LT++ FS N
Sbjct: 10 SRIPQHVAIIMDGNGRWAKQRGHERSYGHQIGAETVHVIAEEAARLGIRYLTLYTFSTEN 69
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP E++ L+ L+ +++ + KNNI R+IG+ L ++ L + T N
Sbjct: 70 WNRPTDEVAALMSLLFDSIEED--TFMKNNISFRIIGDIEKLPANVQTRLYNCVEHTSKN 127
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
TG+ L +A +YSSR EI+ A + I ++ G + ++ L++K+L T +PDPDL+IR
Sbjct: 128 TGMCLVLALSYSSRWEITEASRQIAVLVQKGELTPEQINCDLMSKHLTTGFMPDPDLLIR 187
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE RLS++LLWQ AYSE F YWPDF E A+ Y R+RRFG S++
Sbjct: 188 TGGEIRLSNYLLWQCAYSELYFCETYWPDFREEELRKAICDYQRRERRFGKTSEQ 242
>gi|167570367|ref|ZP_02363241.1| undecaprenyl diphosphate synthase [Burkholderia oklahomensis C6786]
Length = 260
Score = 204 bits (520), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 99/236 (41%), Positives = 144/236 (61%), Gaps = 1/236 (0%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+++ P HI IIMDGNGRWA R LPR AGH +G++ +V A G++ LT+FAFS
Sbjct: 13 AAAVPRHIAIIMDGNGRWATERRLPRVAGHTRGVDAVRSVVEGCARAGVEYLTLFAFSSE 72
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+S L++L + L++ L N I++RV+G+ + I +++ AE +T
Sbjct: 73 NWRRPNDEVSFLMRLFITALEREVGKLHANGIRLRVVGDLSKFEPRIQALIRRAETKTAR 132
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NT L L IA NY R +I +A + + + + +VD A++L + P+PDL I
Sbjct: 133 NTRLTLTIAANYGGRWDILQATQRLVDEAAREGRAA-EVDEDAFARHLAMAYAPEPDLFI 191
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE+R+S+FLLWQ+AY+E F ++WPDF AL Y R+RRFG S +
Sbjct: 192 RTGGEQRISNFLLWQLAYTELYFTDKFWPDFDANALAEALASYTHRERRFGRTSAQ 247
>gi|168703609|ref|ZP_02735886.1| undecaprenyl pyrophosphate synthetase [Gemmata obscuriglobus UQM
2246]
Length = 257
Score = 204 bits (520), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 96/230 (41%), Positives = 139/230 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA +G R GH +G + I +GI LT++ S NW+R
Sbjct: 23 PRHIAIIMDGNGRWAQRQGKERADGHAQGAHSVDVITEECCRLGIGQLTLYCLSSENWKR 82
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EI L+ L+K +L +++ NI+ VIG R L D++L + E TR NTGL
Sbjct: 83 PKPEIDFLMALLKQYLLAEREKIQRQNIRFAVIGRRAGLPDEVLAEIDENVRLTRHNTGL 142
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY SR EI A++++ + + +G + ++D I+ L T +PDPDL++RT G
Sbjct: 143 TLCLAINYGSRGEIVDAVQSLARRVRAGELAPEEIDERAISGALYTGGMPDPDLLVRTAG 202
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E R+S++LLWQ++Y+E P++WP+F L AL Y R+RRFGGL+
Sbjct: 203 EMRVSNYLLWQISYAELWVTPKFWPEFDPPLLHSALRDYARRERRFGGLN 252
>gi|28378682|ref|NP_785574.1| di-trans-poly-cis-decaprenylcistransferase [Lactobacillus plantarum
WCFS1]
gi|300768195|ref|ZP_07078100.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus plantarum
subsp. plantarum ATCC 14917]
gi|308180823|ref|YP_003924951.1| di-trans-poly-cis-decaprenylcistransferase [Lactobacillus plantarum
subsp. plantarum ST-III]
gi|42559804|sp|Q88VJ8|UPPS_LACPL RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|28271518|emb|CAD64423.1| di-trans-poly-cis-decaprenylcistransferase [Lactobacillus plantarum
WCFS1]
gi|300494259|gb|EFK29422.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus plantarum
subsp. plantarum ATCC 14917]
gi|308046314|gb|ADN98857.1| di-trans-poly-cis-decaprenylcistransferase [Lactobacillus plantarum
subsp. plantarum ST-III]
Length = 259
Score = 204 bits (520), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 101/233 (43%), Positives = 144/233 (61%), Gaps = 3/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA AR LPR AGH++G+ +I AA+++G+K LT++AFS NW+R
Sbjct: 24 PAHVAIIMDGNGRWAKARHLPRVAGHKEGMNTVKKITIAASDLGVKVLTLYAFSTENWKR 83
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L++L SF L KNN++V+V+G L + ++ A T+ G+
Sbjct: 84 PTDEVNYLMQLPVSFFDTFVPDLIKNNVRVQVMGYVDHLPEATQKAVQNAIADTKDCDGM 143
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP---DPDLIIR 187
L A NY SR EI ++ I Q ++ G + D+D + I L T+ + DPDL+IR
Sbjct: 144 VLNFALNYGSRAEIVTGVQKIAQQVQDGQLAVGDIDDATIDAALMTAPLAPYNDPDLLIR 203
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
T GE+R+S+FL+WQ+AYSE VF WPDF+ + + RDRRFGGLS
Sbjct: 204 TSGEERISNFLMWQIAYSELVFTDVKWPDFTAATLQACIADFQSRDRRFGGLS 256
>gi|282858896|ref|ZP_06268036.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella bivia
JCVIHMP010]
gi|282588278|gb|EFB93443.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella bivia
JCVIHMP010]
Length = 291
Score = 204 bits (520), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 97/233 (41%), Positives = 145/233 (62%), Gaps = 8/233 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R LPR GH+ G+E I A E+G+K LT++ FS NW R
Sbjct: 50 PEHIAIIMDGNGRWAQKRNLPRTEGHKAGVETVRRITKACGELGVKYLTLYTFSTENWNR 109
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L+ S L+ + KN+ +++VIG+ L ++ L++ + T+ N L
Sbjct: 110 PSEEVSTLMGLVLSSLEDEIFM--KNDARLQVIGDIERLPKEVQTALQQTINNTKNNKSL 167
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSV------CSHDVDSSLIAKYLDTSDVPDPDL 184
L +A +YSSR EI++A ++I +++ ++ + I+K+L T+ +P+PDL
Sbjct: 168 TLVVALSYSSRWEITKATQDIALELQQQNIQLTADNIKEYITEDTISKHLTTAFMPEPDL 227
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+IRTGGE R+S++LLWQ+AYSE F +WPDFS + A+ Y R RRFG
Sbjct: 228 LIRTGGELRISNYLLWQIAYSELYFCDTFWPDFSEKDLHQAIADYQRRQRRFG 280
>gi|313888242|ref|ZP_07821913.1| di-trans,poly-cis-decaprenylcistransferase [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312845645|gb|EFR33035.1| di-trans,poly-cis-decaprenylcistransferase [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 241
Score = 204 bits (519), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 150/232 (64%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S+ P HIGIIMDGNGRWA R +PR GH++G E EIV AA ++ +K+LT++AFS N
Sbjct: 10 SNIPKHIGIIMDGNGRWAKNRKMPRTFGHKEGSERVIEIVEAAYKINVKSLTLYAFSTEN 69
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W+RP EIS+L+ L+ ++K +KKNNI+++V+G+ + I+ ++ A +T+ N
Sbjct: 70 WKRPEEEISKLMDLLAFYIKSQLEKIKKNNIRIKVLGDYKVFPNKIVKLIDAALQETKSN 129
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+ L I NY + EI RA K I +D+ +G++ ++++ YL T D DL+IR
Sbjct: 130 DKMILNIGLNYGGQSEIVRASKMICEDLIAGNISLDEINTESFKDYLYTRGQEDLDLLIR 189
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE R+S+FLL+Q+AYSEF F WPDF E F+ A+ + R+RR+GGL
Sbjct: 190 PSGELRVSNFLLYQLAYSEFYFSNILWPDFHEEEFYKAICDFQNRNRRYGGL 241
>gi|307151049|ref|YP_003886433.1| undecaprenyl diphosphate synthase [Cyanothece sp. PCC 7822]
gi|306981277|gb|ADN13158.1| undecaprenyl diphosphate synthase [Cyanothece sp. PCC 7822]
Length = 249
Score = 204 bits (519), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 90/227 (39%), Positives = 139/227 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA RGLPR GH++G++ +++ + G+ LT +AFS NW R
Sbjct: 21 PQHVAVIMDGNGRWAKRRGLPRILGHQRGVDALKDLLRCCRDWGVPALTAYAFSTENWGR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P+ E+ L+ L + L++ + + N+++R +GN +L + + + +T+ NTG+
Sbjct: 81 PIEEVEFLMTLFERVLRRELKEMMEENVRIRFVGNLEALPSSLQDEIDRSMQETKENTGI 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY R EI +A + I ++ G + D+D +L ++L TS VP PDL++RT G
Sbjct: 141 EFSVATNYGGRQEIIQACRAIASQVKQGEINPEDIDEALFERHLYTSGVPYPDLLVRTSG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+FLLWQ+AY+E WPDF R+ F AL Y R+RRFG
Sbjct: 201 EMRISNFLLWQLAYAEIYVTQTLWPDFDRKEFHLALLNYQQRERRFG 247
>gi|320529257|ref|ZP_08030349.1| di-trans,poly-cis-decaprenylcistransferase [Selenomonas artemidis
F0399]
gi|320138887|gb|EFW30777.1| di-trans,poly-cis-decaprenylcistransferase [Selenomonas artemidis
F0399]
Length = 262
Score = 204 bits (519), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 143/232 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I+MDGNGRWA A+GL R AGH G+ IV AA+++GI+ LT++AFS NW+R
Sbjct: 30 PHHVAIVMDGNGRWAKAQGLSRSAGHEAGVRTLKRIVRAASDMGIEVLTVYAFSTENWKR 89
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L SFL+K + + N+++ IG R D ++EAE+ NTGL
Sbjct: 90 PPIEVDFLMRLFDSFLQKEIEEMHRENVRIHFIGRRDRFGDRFRRRMREAENLMANNTGL 149
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY +DEI RA ++ + + SG + D+D + + LDT+ P DL IRT G
Sbjct: 150 RFNVAVNYGGQDEILRAAHSLAERVASGQLTPEDIDEAAFSNELDTAGDPPVDLFIRTSG 209
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+ RLS+FLLWQ AY+EF F WPDF+ + A+ + R RRFGGL+ +
Sbjct: 210 DLRLSNFLLWQSAYAEFYFTDTLWPDFTPDHLAAAVEDFAGRTRRFGGLTAE 261
>gi|255530897|ref|YP_003091269.1| undecaprenyl diphosphate synthase [Pedobacter heparinus DSM 2366]
gi|255343881|gb|ACU03207.1| undecaprenyl diphosphate synthase [Pedobacter heparinus DSM 2366]
Length = 246
Score = 204 bits (519), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 98/232 (42%), Positives = 147/232 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA +G R GH G+ +IV ++GIK LT++AFS NW R
Sbjct: 13 PEHIAIIMDGNGRWAKNQGKFRAFGHESGVLSVKDIVEGCVDIGIKYLTVYAFSTENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
PV E++ L++L+ + + + +L KNNI++ IG+ SL + LK A D+T NT
Sbjct: 73 PVEEVNALMELLITTINQETETLTKNNIRLNAIGDIASLPQKCIEDLKSAMDKTANNTHC 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +YS++ EI A K + +++G + +++ + + L T ++PDP+L+IRT G
Sbjct: 133 TLTLALSYSAKWEIIEAAKKLAVQVKAGKIDIDEINEAHFSAQLTTINMPDPELMIRTSG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AY+E F WPDF RE F A+ Y R+RRFG +S++
Sbjct: 193 EHRISNFLLWQMAYTELYFTDTLWPDFRREDLFEAIVDYQKRERRFGKISEQ 244
>gi|302879000|ref|YP_003847564.1| undecaprenyl diphosphate synthase [Gallionella capsiferriformans
ES-2]
gi|302581789|gb|ADL55800.1| undecaprenyl diphosphate synthase [Gallionella capsiferriformans
ES-2]
Length = 261
Score = 204 bits (519), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 140/232 (60%), Gaps = 3/232 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R +PR GH++G+E V A ++G++ LT+FAFS NWRR
Sbjct: 18 PRHIAIIMDGNGRWAKQRFMPRIMGHQRGVESLRAAVRACRDLGVQYLTVFAFSSENWRR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
PV E+S L+ L L++ SL KNNI++++IG+R D+ + + AE T NTGL
Sbjct: 78 PVDEVSFLMSLFLKMLEREVASLHKNNIRLKIIGDRSRFDEKLQNTMSHAESLTAGNTGL 137
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R ++ A++ + + S D + YL D P+PDL IRTGG
Sbjct: 138 TLTIAANYGGRWDMMAAVQRLL-SVHPELATSFTEDD--LQPYLSMGDAPEPDLFIRTGG 194
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+F+LWQ+AY+E F WP F R+ A+ Y R+RRFG S++
Sbjct: 195 EMRISNFMLWQLAYTELYFTDTLWPVFDRKELEKAIASYQNRERRFGRTSEQ 246
>gi|296158900|ref|ZP_06841728.1| undecaprenyl diphosphate synthase [Burkholderia sp. Ch1-1]
gi|295890775|gb|EFG70565.1| undecaprenyl diphosphate synthase [Burkholderia sp. Ch1-1]
Length = 260
Score = 204 bits (519), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 104/233 (44%), Positives = 143/233 (61%), Gaps = 3/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH +G++ V A A G++ LT+FAFS NWRR
Sbjct: 17 PRHIAIIMDGNGRWATQRRLPRVAGHTRGVDAVRAAVEACALRGVEYLTLFAFSSENWRR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L + L++ L N I++RV+G+ D I ++K AE +T NT L
Sbjct: 77 PNDEVSFLMRLFVTALEREIGKLHANGIRLRVVGDLSRFDTRIRDLIKRAETKTARNTRL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L IA NY R +I +A + + Q +G +V A++L + P+PDL IRTG
Sbjct: 137 TLTIAANYGGRWDIMQATRKLAEQSALAGKAV--EVTEESFAEHLSMAYAPEPDLFIRTG 194
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+R+S+FLLWQ+AY+EF F +WPDF + HA+ Y R+RRFG S +
Sbjct: 195 GERRVSNFLLWQLAYTEFYFTDTFWPDFDADALGHAIASYAERERRFGRTSAQ 247
>gi|224536355|ref|ZP_03676894.1| hypothetical protein BACCELL_01229 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522052|gb|EEF91157.1| hypothetical protein BACCELL_01229 [Bacteroides cellulosilyticus
DSM 14838]
Length = 244
Score = 204 bits (519), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 101/235 (42%), Positives = 141/235 (60%), Gaps = 2/235 (0%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P H+ IIMDGNGRWA RG R GH+ G E + I AA +GI+ LT++ FS N
Sbjct: 10 SRIPQHVAIIMDGNGRWAKQRGHERSYGHQVGAETVHVIAEEAARLGIRYLTLYTFSTEN 69
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP E++ L+ L+ +++ + KNNI R+IG+ L ++ L + T N
Sbjct: 70 WNRPTDEVAALMSLLFDSIEED--TFMKNNISFRIIGDIEKLPANVQTRLYNCVENTSKN 127
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
TG+ L +A +YSSR EI+ A + I ++ + +D L++K+L T +PDPDL+IR
Sbjct: 128 TGMCLVLALSYSSRWEITEASRQIAALVQKRELTPEQIDCDLMSKHLTTHFMPDPDLLIR 187
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE RLS++LLWQ AYSE F YWPDF E A+ Y R+RRFG S++
Sbjct: 188 TGGEIRLSNYLLWQCAYSELYFCETYWPDFREEELCKAICDYQRRERRFGKTSEQ 242
>gi|261866958|ref|YP_003254880.1| di-trans,poly-cis-decaprenylcistransferase [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261412290|gb|ACX81661.1| di-trans,poly-cis-decaprenylcistransferase [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 239
Score = 204 bits (519), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 97/228 (42%), Positives = 139/228 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R GH+ G+ E V+ A ++G+K LT++AFS NW R
Sbjct: 10 PQHVAIIMDGNGRWAKQQGKMRIFGHKNGVAAVREAVSYARKIGVKYLTLYAFSSENWNR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L L L KNNI+++++GN + + +K AE T NT L
Sbjct: 70 PEQEVSALMNLFMQALDFELKKLHKNNIRLKILGNVARFSEGLQEKIKNAEKLTENNTAL 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I +A + + Q +++ + ++D +L+ ++L T D P+ DL+IRT G
Sbjct: 130 TLNIAANYGGRWDIVQAAQQLAQKVQTQQLAVTEIDEALLQQHLVTQDDPEVDLLIRTSG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R+S+FLLWQ AY+EF F WPDF+ F A+ Y R RRFGG
Sbjct: 190 EQRISNFLLWQAAYAEFYFSDVLWPDFNEAEFHQAILSYQQRHRRFGG 237
>gi|313623930|gb|EFR94036.1| di-trans,poly-cis-decaprenylcistransferase [Listeria innocua FSL
J1-023]
Length = 253
Score = 204 bits (519), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 101/229 (44%), Positives = 139/229 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R LPR AGH++G++V + A +GI LT++AFS NW+R
Sbjct: 25 PRHVAIIMDGNGRWAKKRFLPRIAGHKEGMDVVKRVTRYANAIGIDVLTLYAFSTENWKR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL F L + N++V V+G R +L + + +++A T TGL
Sbjct: 85 PTDEVDFLMKLPVEFFDSFVPELIEENVRVNVMGYRENLPEHTMRAVEKAIADTAHCTGL 144
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY R EI A K +++ S D+ L+ +L + + DPDL+IRT G
Sbjct: 145 TLNFALNYGGRSEIITAAKEAMEELILAGKTSEDLTEELLNDHLMSHGLGDPDLLIRTSG 204
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+F+LWQ+AYSEF F +WPDFS+E F A+ +Y R RRFGGL
Sbjct: 205 ELRLSNFMLWQLAYSEFYFTETHWPDFSKEDFLQAIIEYQNRSRRFGGL 253
>gi|206890196|ref|YP_002248077.1| di-trans,poly-cis-decaprenylcistransferase [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|206742134|gb|ACI21191.1| di-trans,poly-cis-decaprenylcistransferase [Thermodesulfovibrio
yellowstonii DSM 11347]
Length = 235
Score = 204 bits (519), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 142/229 (62%), Gaps = 4/229 (1%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+GIIMDGNGRWA RGLPR GH++G+E EI+ +A + I LT +AFSI NW+RP
Sbjct: 7 HVGIIMDGNGRWAQLRGLPRYEGHKRGVEKVKEIIRSAIRLNIDVLTFYAFSIENWQRPK 66
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+ ++ L+++ L+K + ++ ++IGNR + +IL V++E E T L
Sbjct: 67 KEVEIIMDLLQNHLRKETQTFISQGVRFKMIGNRDMIPKNILNVIEETESATSECKELIA 126
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
A +Y RDEI RA+K I + + VD + LDT+ +P+PDLIIRT GE+
Sbjct: 127 QFAISYGGRDEIIRAVKKIIIN----NTVPEKVDEDFFSSMLDTAGIPEPDLIIRTSGEQ 182
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
R+S+FL+WQ AYSEF F WPDF+ E F A+ + R RRFG +S+
Sbjct: 183 RISNFLVWQSAYSEFYFSQTLWPDFTEEEFTEAILDFQKRQRRFGKVSE 231
>gi|323495358|ref|ZP_08100436.1| undecaprenyl pyrophosphate synthase [Vibrio brasiliensis LMG 20546]
gi|323310429|gb|EGA63615.1| undecaprenyl pyrophosphate synthase [Vibrio brasiliensis LMG 20546]
Length = 251
Score = 204 bits (519), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 142/227 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA A+G PR GH+ G+ + ++ +A++GIK +T+FAFS NWRR
Sbjct: 12 PKHIAIIMDGNGRWAKAQGKPRVFGHKNGVAAVRKAISTSAKLGIKAITLFAFSSENWRR 71
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L + L L KNN+++RVIG+ + + + +AE T NTG+
Sbjct: 72 PEEEVGVLMELFITVLSTEVKKLHKNNLRLRVIGDTSRFNQRLQSKIAQAEAMTESNTGM 131
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ IA NY + +I +A K I + +G + ++ LI ++L +D+P+ DL+IRT G
Sbjct: 132 VINIAANYGGKWDIMQATKAISAKVAAGELNCDEISEELITEHLTMADLPEVDLMIRTSG 191
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+F+LWQ+AY+E F P YWP+F A+ + R+RRFG
Sbjct: 192 ECRISNFMLWQMAYAEMYFTPIYWPEFDENSLIEAVTWFVNRERRFG 238
>gi|153831278|ref|ZP_01983945.1| undecaprenyl diphosphate synthase [Vibrio cholerae 623-39]
gi|148873236|gb|EDL71371.1| undecaprenyl diphosphate synthase [Vibrio cholerae 623-39]
Length = 256
Score = 204 bits (519), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 143/227 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA A+G PR GH+ G+ + ++ +A +GIK +T+FAFS NWRR
Sbjct: 18 PKHIAVIMDGNGRWAKAQGKPRVFGHKNGVAAVRKTISTSARLGIKAVTLFAFSSENWRR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L + L L KNN+++RVIG++ + + + +AE T NTG+
Sbjct: 78 PEEEVGVLMELFMTVLSTEIKKLHKNNLRLRVIGDKSRFSERLQTKIAQAEQLTANNTGM 137
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ IA NY + +I +A + + + + G + D+D ++ ++L +D+PD DL+IRT G
Sbjct: 138 VVNIAANYGGQWDILQATQALAEKVTQGELQPSDIDEAVFKQHLTMADLPDVDLLIRTSG 197
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+F+LWQ+AY+E F P +WP+F A+ + R+RRFG
Sbjct: 198 ECRISNFMLWQLAYAEMYFTPVFWPEFDENCLIEAVTWFVNRERRFG 244
>gi|53719764|ref|YP_108750.1| undecaprenyl pyrophosphate synthetase [Burkholderia pseudomallei
K96243]
gi|76808682|ref|YP_333971.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 1710b]
gi|126455056|ref|YP_001066748.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 1106a]
gi|134277426|ref|ZP_01764141.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 305]
gi|167720162|ref|ZP_02403398.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei DM98]
gi|167739167|ref|ZP_02411941.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 14]
gi|167816378|ref|ZP_02448058.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 91]
gi|167824756|ref|ZP_02456227.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 9]
gi|167846288|ref|ZP_02471796.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei B7210]
gi|167894870|ref|ZP_02482272.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 7894]
gi|167903259|ref|ZP_02490464.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei NCTC
13177]
gi|167911500|ref|ZP_02498591.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 112]
gi|167919509|ref|ZP_02506600.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei
BCC215]
gi|217421860|ref|ZP_03453364.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
pseudomallei 576]
gi|226200143|ref|ZP_03795689.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
pseudomallei Pakistan 9]
gi|237812804|ref|YP_002897255.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
pseudomallei MSHR346]
gi|242316425|ref|ZP_04815441.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
pseudomallei 1106b]
gi|254198300|ref|ZP_04904722.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei S13]
gi|254259286|ref|ZP_04950340.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
pseudomallei 1710a]
gi|52210178|emb|CAH36157.1| undecaprenyl pyrophosphate synthetase [Burkholderia pseudomallei
K96243]
gi|76578135|gb|ABA47610.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 1710b]
gi|126228698|gb|ABN92238.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
pseudomallei 1106a]
gi|134251076|gb|EBA51155.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 305]
gi|169655041|gb|EDS87734.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei S13]
gi|217395602|gb|EEC35620.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
pseudomallei 576]
gi|225927827|gb|EEH23868.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
pseudomallei Pakistan 9]
gi|237505258|gb|ACQ97576.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
pseudomallei MSHR346]
gi|242139664|gb|EES26066.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
pseudomallei 1106b]
gi|254217975|gb|EET07359.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
pseudomallei 1710a]
Length = 260
Score = 204 bits (519), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 98/232 (42%), Positives = 140/232 (60%), Gaps = 1/232 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH +G++ +V A G++ LT+FAFS NWRR
Sbjct: 17 PRHIAIIMDGNGRWATERRLPRVAGHTRGVDAVRSVVEGCARAGVEYLTLFAFSSENWRR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L + L++ L N I++RV+G+ + I +++ E +T NT L
Sbjct: 77 PNDEVSFLMRLFITALEREVGKLHANGIRLRVVGDLTKFEPRIQALIRRGETKTARNTRL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I +A + + ++ ++D A++L + P+PDL IRTGG
Sbjct: 137 TLTIAANYGGRWDILQATRKLVEEAAREGRAP-EIDEDAFARHLAMAYAPEPDLFIRTGG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FLLWQ+AY+EF F +WPDF AL Y R+RRFG S +
Sbjct: 196 EQRISNFLLWQLAYTEFYFTDTFWPDFDAGALAEALASYTHRERRFGRTSAQ 247
>gi|182683241|ref|YP_001834988.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae CGSP14]
gi|182628575|gb|ACB89523.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae CGSP14]
Length = 258
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 105/238 (44%), Positives = 136/238 (57%), Gaps = 4/238 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ + P HIGIIMDGNGRWA R PR GH+ G+E + AA ++G+K +T++AFS
Sbjct: 21 VPTQVPAHIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQTVTKAANKLGVKVITVYAFST 80
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+ ++ L F L NN+K+++IG L L +AE+ T+
Sbjct: 81 ENWTRPDQEVKFIMNLPVEFYDNYVPELHANNVKIQMIGETDRLPKQTFEALTKAEELTK 140
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----D 181
NTGL L A NY R EI++A+K I QD+ + D+ LI YL T +P D
Sbjct: 141 NNTGLILNFALNYGGRAEITQALKLISQDVLDAKINPGDITEELIGNYLFTQHLPKDLRD 200
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDLIIRT GE RLS+FL WQ AYSE F WPDF A+ YN R RRFGG+
Sbjct: 201 PDLIIRTSGELRLSNFLPWQGAYSELYFTDTLWPDFDEVALQEAILAYNRRHRRFGGV 258
>gi|297584071|ref|YP_003699851.1| undecaprenyl diphosphate synthase [Bacillus selenitireducens MLS10]
gi|297142528|gb|ADH99285.1| undecaprenyl diphosphate synthase [Bacillus selenitireducens MLS10]
Length = 250
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 143/229 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA RGLPR AGHR+G+ V A + G+K LT++AFS NW+R
Sbjct: 22 PKHIAIIMDGNGRWAKKRGLPRVAGHREGMNTIRRTVRQANKYGVKILTLYAFSTENWKR 81
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L + FL K L + N++VR+ G + L + +++A +T N GL
Sbjct: 82 PRPEVEFLMRLPERFLSKELPELIEQNVRVRITGEKDKLPEYTKRAVEKAVAETAHNDGL 141
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY SR E+ + I++I +D++ ++ ++D + L T D+ DPDL+IRT G
Sbjct: 142 ILNFALNYGSRSEMIQGIQSICRDVKDNNLSIDEIDEACFTGRLMTHDLDDPDLLIRTSG 201
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+F+LWQ+AY+EF F WPDF + F A+ Y R RR+GG+
Sbjct: 202 EIRLSNFMLWQLAYAEFWFTNVLWPDFKEDDFQEAILVYQNRQRRYGGV 250
>gi|77360956|ref|YP_340531.1| undecaprenyl pyrophosphate synthetase [Pseudoalteromonas
haloplanktis TAC125]
gi|76875867|emb|CAI87088.1| undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans-poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS)
[Pseudoalteromonas haloplanktis TAC125]
Length = 259
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 96/227 (42%), Positives = 139/227 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA AR PR GH+KG++ + V ++GI++LT+FAFS NWRR
Sbjct: 20 PKHVAIIMDGNGRWAQARNRPRVFGHKKGVDAVRQSVQFCTKLGIQSLTLFAFSSENWRR 79
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L L K L KNN+K+ +IG+ + + + A+ T NTGL
Sbjct: 80 PEDEVKTLMELFLFVLSKEVKKLHKNNVKLTIIGDLSRFSESLRSKVDTAQKLTANNTGL 139
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L +A NY R +++ A K + + + G + D+ IA+Y+ +D +PDL+IRTGG
Sbjct: 140 HLNVAANYGGRWDMANAAKQLAEQVAQGQLDPADITEERIAQYMSMADQAEPDLLIRTGG 199
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+ R+S+FLLWQ AY+E F WPDF+ F A+ Y R+RRFG
Sbjct: 200 DVRISNFLLWQAAYAELYFTDTLWPDFNEAAFAEAIACYVARERRFG 246
>gi|291166150|gb|EFE28196.1| di-trans,poly-cis-decaprenylcistransferase [Filifactor alocis ATCC
35896]
Length = 240
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 100/228 (43%), Positives = 143/228 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+GIIMDGNGRWA R +PR GH++G+E +I + +GIK LT++AFS NW+R
Sbjct: 11 PTHVGIIMDGNGRWAKKRMMPRNFGHKQGVETLKKITEECSNLGIKYLTVYAFSTENWKR 70
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
EIS ++ L+ +L K +L + N+K+ IG+ L L E+++ T+ NTGL
Sbjct: 71 SGLEISGIMNLLVDYLAKELRNLHEKNVKLMTIGDIEKLPKAAYNKLVESKEFTKDNTGL 130
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY SR +IS AIK I + VD + + +LDT+ +PDPDLIIR G
Sbjct: 131 VLTVALNYGSRRDISHAIKKIILSDRESPIDLDKVDDTFLRDFLDTAFLPDPDLIIRPSG 190
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+RLS+FL+W+ AY+EF + WPDF +E AL+ + R+RR+GG
Sbjct: 191 EQRLSNFLMWEAAYTEFWYSDINWPDFKKEDLHRALHDFQNRNRRYGG 238
>gi|126439718|ref|YP_001059465.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 668]
gi|126219211|gb|ABN82717.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
pseudomallei 668]
Length = 260
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 98/232 (42%), Positives = 140/232 (60%), Gaps = 1/232 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH +G++ +V A G++ LT+FAFS NWRR
Sbjct: 17 PRHIAIIMDGNGRWATERRLPRVAGHTRGVDAVRSVVEGCARAGVEYLTLFAFSSENWRR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L + L++ L N I++RV+G+ + I +++ E +T NT L
Sbjct: 77 PNDEVSFLMRLFITALEREVGKLHANGIRLRVVGDLTKFEPRIQALIRRGETKTARNTRL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I +A + + ++ ++D A++L + P+PDL IRTGG
Sbjct: 137 TLTIAANYGGRWDILQATRKLVEEAAREGRAP-EIDEDAFARHLAMAYAPEPDLFIRTGG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FLLWQ+AY+EF F +WPDF AL Y R+RRFG S +
Sbjct: 196 EQRISNFLLWQLAYTEFYFTDAFWPDFDAGALAEALASYTHRERRFGRTSAQ 247
>gi|257084481|ref|ZP_05578842.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis Fly1]
gi|256992511|gb|EEU79813.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis Fly1]
Length = 271
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/235 (42%), Positives = 144/235 (61%), Gaps = 4/235 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH++G++ +I A+ +G+K LT++AFS NW+R
Sbjct: 27 PQHIAIIMDGNGRWAQNRRLPRIAGHKEGMDTVKKITKHASHLGVKVLTLYAFSTENWKR 86
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L++L F L K N+KV V+G + L +K A +QT+ NTG+
Sbjct: 87 PTDEVNFLMQLPVDFFDTFVPELIKENVKVNVMGYQEFLPSHTQDAVKRAIEQTKDNTGM 146
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY +R E+ A+K I ++ + S ++ IA +L T +P DP+L+I
Sbjct: 147 VLNFALNYGARAELLTAMKQIAAEVSEKTYTSDEITEETIADHLMTGFLPTELRDPELLI 206
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
RT GE+R+S+FLLWQ+AYSE F WPDFS + A+ + R+RRFGGL +
Sbjct: 207 RTSGEERISNFLLWQIAYSELFFTKALWPDFSGDTLETAIASFQNRNRRFGGLKE 261
>gi|254849386|ref|ZP_05238736.1| undecaprenyl diphosphate synthase [Vibrio cholerae MO10]
gi|254845091|gb|EET23505.1| undecaprenyl diphosphate synthase [Vibrio cholerae MO10]
Length = 253
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 142/227 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA A+G PR GH+ G+ + ++ +A +GIK +T+FAFS NWRR
Sbjct: 15 PKHIAVIMDGNGRWAKAQGKPRVFGHKNGVAAVRKTISTSARLGIKAVTLFAFSSENWRR 74
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L + L L KNN+++RVIG++ + + + +AE T NTG+
Sbjct: 75 PEEEVGVLMELFMTVLSTEIKKLHKNNLRLRVIGDKSRFSERLQTKIAQAEQLTASNTGM 134
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ IA NY + +I +A + + + + G + D+D + ++L +D+PD DL+IRT G
Sbjct: 135 VVNIAANYGGQWDILQATQALAEKVTQGELQPSDIDEDVFKQHLTMADLPDVDLLIRTSG 194
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+F+LWQ+AY+E F P +WP+F A+ + R+RRFG
Sbjct: 195 ECRISNFMLWQLAYAEMYFTPVFWPEFDENCLIEAVTWFVNRERRFG 241
>gi|322377191|ref|ZP_08051683.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sp. M334]
gi|321281904|gb|EFX58912.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sp. M334]
Length = 252
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 105/238 (44%), Positives = 136/238 (57%), Gaps = 4/238 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ + P HIGIIMDGNGRWA R PR GH+ G+E + AA ++G+K +T++AFS
Sbjct: 15 VPTQVPAHIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQTVTKAANKLGVKVITVYAFST 74
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+ ++ L F L NN+K+++IG L L +AE+ T+
Sbjct: 75 ENWTRPDQEVKFIMNLPVEFYDNYVPELHANNVKIQMIGETDRLPKQTFEALTKAEELTK 134
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----D 181
NTGL L A NY R EI++A+K I QD+ + D+ LI YL T +P D
Sbjct: 135 NNTGLILNFALNYGGRAEITQALKLISQDVLDAKINPGDITEELIGNYLFTQHLPKDVRD 194
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDLIIRT GE RLS+FL WQ AYSE F WPDF A+ YN R RRFGG+
Sbjct: 195 PDLIIRTSGELRLSNFLPWQGAYSELYFTDTLWPDFDEVALQEAILAYNRRHRRFGGV 252
>gi|332885431|gb|EGK05680.1| di-trans,poly-cis-decaprenylcistransferase [Dysgonomonas mossii DSM
22836]
Length = 249
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 147/232 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA ++ L R GH++GI + AAA+ I +T++ FS NW+R
Sbjct: 13 PKHVAIIMDGNGRWAKSQNLDRSFGHKEGIVAVRRTIEAAAKAEIAYITLYTFSTENWKR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L+ + L KNNI+V+VIG+ L D L +T + TG
Sbjct: 73 PEEEVKALMALMIQAVANETPDLIKNNIRVKVIGDIDRLPADTQKALDYCLKETSVCTGT 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ +A +YSS+ E+++A+K I D+E+G + D++ SLI +YL T +PDPD+++RTGG
Sbjct: 133 TVVLALSYSSKWELTKAMKTIATDVEAGKIKMEDIEESLIPQYLSTKGIPDPDILVRTGG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AYSE F E WPDF+ E F A+ + R+RRFG S++
Sbjct: 193 ELRISNFLLWQIAYSELYFTDELWPDFNEESLFKAVVDFQNRERRFGKTSEQ 244
>gi|120555455|ref|YP_959806.1| undecaprenyl diphosphate synthase [Marinobacter aquaeolei VT8]
gi|120325304|gb|ABM19619.1| Undecaprenyl pyrophosphate synthetase [Marinobacter aquaeolei VT8]
Length = 256
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/243 (39%), Positives = 148/243 (60%), Gaps = 6/243 (2%)
Query: 1 MVASMMSSSP------PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVG 54
M A + + P P H+ IIMDGN RWA A L GH+ G++ +V A+ G
Sbjct: 1 MTAKVTAEIPVAADNCPRHVAIIMDGNNRWAKAHRLKGVVGHKAGVDAVKAVVETCAKEG 60
Query: 55 IKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDIL 114
++ LT+FAFS NWRRP E+S L++L L++ L +NNI++R+IG+R + + +
Sbjct: 61 VEVLTLFAFSSENWRRPKDEVSALMRLFLIALEREVRKLHRNNIRLRIIGDRSAFNPALQ 120
Query: 115 CVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYL 174
+++AE TR NT + + IA NY +I++A + + + +++G + D+ LI ++L
Sbjct: 121 EHMEKAEALTRDNTRMTVVIAANYGGHWDITQATRKVAEQVKAGQLEPSDITDDLIQEHL 180
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
D+P PDL+IRT GE+R+S+FLLW +AY+EF F +WPDF E AL+ Y R R
Sbjct: 181 SIGDLPMPDLLIRTAGEQRISNFLLWHLAYTEFYFSEVFWPDFKSEQMLKALDAYAHRQR 240
Query: 235 RFG 237
RFG
Sbjct: 241 RFG 243
>gi|332140474|ref|YP_004426212.1| undecaprenyl diphosphate synthase [Alteromonas macleodii str. 'Deep
ecotype']
gi|327550496|gb|AEA97214.1| undecaprenyl diphosphate synthase [Alteromonas macleodii str. 'Deep
ecotype']
Length = 261
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 98/235 (41%), Positives = 148/235 (62%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + +++ P H+ IIMDGNGRWA +G R GH+ G+E +V A + GI++LT+FA
Sbjct: 16 APVATTTGPKHVAIIMDGNGRWAQKKGKIRTFGHKAGVESVRAVVRFARQNGIESLTLFA 75
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW+RP E+S L+ L L L KN ++++VIG+ + D ++ +++AED
Sbjct: 76 FSSENWKRPEEEVSVLMDLFNLVLNSEAKRLHKNGVRLQVIGDVEAFDAKLVEKIRKAED 135
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T+ N L L IA NY R +I A K + ++SG + D+ + ++ T+++P+
Sbjct: 136 MTKDNKDLVLNIAANYGGRWDIVNAAKQLASQVKSGELDVQDITEDALNAHISTANLPEL 195
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRTGGE R+S+FLLWQ AY+E F WPDF+ ++F A+N YN+R RRFG
Sbjct: 196 DLLIRTGGEHRISNFLLWQCAYAELYFTDVLWPDFNEDVFQLAVNDYNVRQRRFG 250
>gi|294101872|ref|YP_003553730.1| undecaprenyl diphosphate synthase [Aminobacterium colombiense DSM
12261]
gi|293616852|gb|ADE57006.1| undecaprenyl diphosphate synthase [Aminobacterium colombiense DSM
12261]
Length = 228
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 99/229 (43%), Positives = 136/229 (59%), Gaps = 5/229 (2%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
HI IIMDGNGRWA R LPR GHR G++ V AAA+ GI L+++AFS NW+RP
Sbjct: 5 HIAIIMDGNGRWAKKRHLPRLLGHRAGVKAVERTVRAAADFGIPYLSLYAFSTENWKRPK 64
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+E+ L+ L + ++ K L K ++++R G L DI ++ EAE++T L L
Sbjct: 65 TEVKGLMSLFRYYINKKVQELVKEDVRLRFAGRTKELPKDIQEIIHEAENETEKGQRLQL 124
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+ NY R EI A++ + +D G V + S YL D+PDPDLIIRT GE
Sbjct: 125 IVCLNYGGRQEIVDAVQKLLKDGYKGKVTEETIRS-----YLYLPDLPDPDLIIRTSGEY 179
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
RLS+F LW+ +YSEF F WPDF++E A+ Y RDRR+GG+ +
Sbjct: 180 RLSNFWLWEGSYSEFYFSSLLWPDFNKEALQEAILSYEKRDRRYGGIQR 228
>gi|229507670|ref|ZP_04397175.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae BX 330286]
gi|229512135|ref|ZP_04401614.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae B33]
gi|229519270|ref|ZP_04408713.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae RC9]
gi|229607174|ref|YP_002877822.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae MJ-1236]
gi|255747048|ref|ZP_05420993.1| undecaprenyl pyrophosphate synthetase [Vibrio cholera CIRS 101]
gi|262161408|ref|ZP_06030518.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae INDRE 91/1]
gi|42560015|sp|Q9KPV6|UPPS_VIBCH RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|229343959|gb|EEO08934.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae RC9]
gi|229352100|gb|EEO17041.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae B33]
gi|229355175|gb|EEO20096.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae BX 330286]
gi|229369829|gb|ACQ60252.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae MJ-1236]
gi|255735450|gb|EET90850.1| undecaprenyl pyrophosphate synthetase [Vibrio cholera CIRS 101]
gi|262028719|gb|EEY47373.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae INDRE 91/1]
Length = 250
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 142/227 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA A+G PR GH+ G+ + ++ +A +GIK +T+FAFS NWRR
Sbjct: 12 PKHIAVIMDGNGRWAKAQGKPRVFGHKNGVAAVRKTISTSARLGIKAVTLFAFSSENWRR 71
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L + L L KNN+++RVIG++ + + + +AE T NTG+
Sbjct: 72 PEEEVGVLMELFMTVLSTEIKKLHKNNLRLRVIGDKSRFSERLQTKIAQAEQLTASNTGM 131
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ IA NY + +I +A + + + + G + D+D + ++L +D+PD DL+IRT G
Sbjct: 132 VVNIAANYGGQWDILQATQALAEKVTQGELQPSDIDEDVFKQHLTMADLPDVDLLIRTSG 191
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+F+LWQ+AY+E F P +WP+F A+ + R+RRFG
Sbjct: 192 ECRISNFMLWQLAYAEMYFTPVFWPEFDENCLIEAVTWFVNRERRFG 238
>gi|159896710|ref|YP_001542957.1| undecaprenyl diphosphate synthase [Herpetosiphon aurantiacus ATCC
23779]
gi|159889749|gb|ABX02829.1| undecaprenyl diphosphate synthase [Herpetosiphon aurantiacus ATCC
23779]
Length = 244
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/242 (40%), Positives = 142/242 (58%), Gaps = 4/242 (1%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
V + ++ P H+ IIMDGNGRWA RGLPR AGH G IV A +GI LTI+
Sbjct: 3 VQQLETTVAPRHVAIIMDGNGRWAQGRGLPRLAGHHAGTGNIKRIVREAISLGIPYLTIY 62
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E+ L++++ +L + L +++ ++G +D + ++ A
Sbjct: 63 AFSTENWKRPSWEVRGLMRIMAEYLDRELRELHAEGVRLHLLGTLEGVDSALAKKIQNAI 122
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T NT L L +AFNY R +I A++ I + + D+ +IA +L TS +PD
Sbjct: 123 TMTANNTALTLSVAFNYGGRADIVNAVREIV----AKGINPEDISDEMIAGHLYTSGIPD 178
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDLI+RT GE+RLS+FL+WQ AYSE+ P WPDF + F A++ + R+RR+GG
Sbjct: 179 PDLIVRTSGEQRLSNFLIWQAAYSEYYMTPLLWPDFGPDQFREAVSNFGNRERRYGGRIG 238
Query: 242 KG 243
+G
Sbjct: 239 EG 240
>gi|51892634|ref|YP_075325.1| undecaprenyl pyrophosphate synthase [Symbiobacterium thermophilum
IAM 14863]
gi|51856323|dbj|BAD40481.1| undecaprenyl pyrophosphate synthase [Symbiobacterium thermophilum
IAM 14863]
Length = 256
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 99/229 (43%), Positives = 139/229 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RGLPR GH G+E +V AA ++GIK LT +AFS NW+R
Sbjct: 28 PRHVAIIMDGNGRWALRRGLPRTVGHCAGVEALRGVVKAAPDLGIKILTCYAFSTENWKR 87
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L+ + + +L +N +++ IG L + A TR N L
Sbjct: 88 PKDEVDTLMSLLLEYCRLEAENLHRNGVRINAIGRIHELPPAQQQEIARAVALTRGNDRL 147
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY + E+ A +++ +++SG + +D+ ++ ++L T+D+PDPDLIIRT G
Sbjct: 148 ILNLAVNYGGQAELVDAFRSLAAEVQSGRLAPEAIDAEVVRRHLYTADLPDPDLIIRTAG 207
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+FLLWQ AY+E YWPDF+RE AL Y R+RRFG L
Sbjct: 208 EMRLSNFLLWQSAYAEIWVTDVYWPDFTREHLEQALRDYARRERRFGAL 256
>gi|58337543|ref|YP_194128.1| undecaprenyl pyrophosphate synthase [Lactobacillus acidophilus
NCFM]
gi|227904184|ref|ZP_04021989.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus
acidophilus ATCC 4796]
gi|73920262|sp|Q5FJM7|UPPS_LACAC RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|58254860|gb|AAV43097.1| undecaprenyl pyrophosphate synthetase [Lactobacillus acidophilus
NCFM]
gi|227868203|gb|EEJ75624.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus
acidophilus ATCC 4796]
Length = 244
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/229 (44%), Positives = 147/229 (64%), Gaps = 3/229 (1%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+H+ IIMDGNGRWA R PR GHR+G++ I AA ++GIK LT++AFS NW RP
Sbjct: 9 NHLAIIMDGNGRWAKKRHKPRFVGHREGMDNVERITLAANQLGIKVLTLYAFSTENWARP 68
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E++ L+ L F K +L +NN+KV ++G L + +++ A +T NTGL
Sbjct: 69 KEEVAYLMNLPVRFFDKYMPTLMENNVKVNIMGYLDELPEKTYKIVQRAMSETVNNTGLI 128
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP---DPDLIIRT 188
L AFNY SR EI+ A+K + IESGS+ S ++ S+I+ +L T + DPDL+IRT
Sbjct: 129 LNFAFNYGSRREITSAVKELGGMIESGSLKSEEITESMISDHLMTGNFGKYRDPDLLIRT 188
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
GE+R+S+FLLWQ+AYSE F + WPDF ++ +++Y R+RRFG
Sbjct: 189 SGEQRISNFLLWQLAYSELAFSEKNWPDFDKDDLKEFVDEYKHRNRRFG 237
>gi|254179325|ref|ZP_04885924.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 1655]
gi|254189289|ref|ZP_04895800.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei
Pasteur 52237]
gi|254297209|ref|ZP_04964662.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 406e]
gi|157807737|gb|EDO84907.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 406e]
gi|157936968|gb|EDO92638.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei
Pasteur 52237]
gi|184209865|gb|EDU06908.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 1655]
Length = 251
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 98/232 (42%), Positives = 140/232 (60%), Gaps = 1/232 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH +G++ +V A G++ LT+FAFS NWRR
Sbjct: 8 PRHIAIIMDGNGRWATERRLPRVAGHTRGVDAVRSVVEGCARAGVEYLTLFAFSSENWRR 67
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L + L++ L N I++RV+G+ + I +++ E +T NT L
Sbjct: 68 PNDEVSFLMRLFITALEREVGKLHANGIRLRVVGDLTKFEPRIQALIRRGETKTARNTRL 127
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I +A + + ++ ++D A++L + P+PDL IRTGG
Sbjct: 128 TLTIAANYGGRWDILQATRKLVEEAAREGRAP-EIDEDAFARHLAMAYAPEPDLFIRTGG 186
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FLLWQ+AY+EF F +WPDF AL Y R+RRFG S +
Sbjct: 187 EQRISNFLLWQLAYTEFYFTDTFWPDFDAGALAEALASYTHRERRFGRTSAQ 238
>gi|149006015|ref|ZP_01829744.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
SP18-BS74]
gi|303255044|ref|ZP_07341120.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae BS455]
gi|303259370|ref|ZP_07345347.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
SP-BS293]
gi|303261125|ref|ZP_07347074.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
SP14-BS292]
gi|303263453|ref|ZP_07349376.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae BS397]
gi|303265745|ref|ZP_07351643.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae BS457]
gi|303267824|ref|ZP_07353626.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae BS458]
gi|147762371|gb|EDK69332.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
SP18-BS74]
gi|302597874|gb|EFL64944.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae BS455]
gi|302637962|gb|EFL68448.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
SP14-BS292]
gi|302639304|gb|EFL69762.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
SP-BS293]
gi|302642520|gb|EFL72865.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae BS458]
gi|302644653|gb|EFL74902.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae BS457]
gi|302647226|gb|EFL77450.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae BS397]
gi|332076708|gb|EGI87170.1| di-trans poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae GA17545]
Length = 252
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 105/238 (44%), Positives = 136/238 (57%), Gaps = 4/238 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ + P HIGIIMDGNGRWA R PR GH+ G+E + AA ++G+K +T++AFS
Sbjct: 15 VPTQVPAHIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQTVTKAANKLGVKVITVYAFST 74
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+ ++ L F L NN+K+++IG L L +AE+ T+
Sbjct: 75 ENWTRPDQEVKFIMNLPVEFYDNYVPELHANNVKIQMIGETDRLPKQTFEALTKAEELTK 134
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----D 181
NTGL L A NY R EI++A+K I QD+ + D+ LI YL T +P D
Sbjct: 135 NNTGLILNFALNYGGRAEITQALKLISQDVLDAKINPGDITEELIGNYLFTQHLPKDLRD 194
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDLIIRT GE RLS+FL WQ AYSE F WPDF A+ YN R RRFGG+
Sbjct: 195 PDLIIRTSGELRLSNFLPWQGAYSELYFTDTLWPDFDEVALQEAILAYNRRHRRFGGV 252
>gi|298370304|ref|ZP_06981620.1| undecaprenyl pyrophosphate synthetase [Neisseria sp. oral taxon 014
str. F0314]
gi|298281764|gb|EFI23253.1| undecaprenyl pyrophosphate synthetase [Neisseria sp. oral taxon 014
str. F0314]
Length = 248
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 142/232 (61%), Gaps = 6/232 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA R LPR GH++G++ E+V A+ G++ LT+FAFS NWRR
Sbjct: 15 PRHIAVIMDGNGRWAKKRFLPRVMGHKRGLDALEEMVKNCAQAGVEYLTVFAFSTENWRR 74
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L L+K L +NN++++VIG+R +IL ++ AE T NTGL
Sbjct: 75 PEDEVSFLMGLFLQALQKQVQRLHENNMRLKVIGSRERFSTEILQGIEAAEVLTAGNTGL 134
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA +Y R +I +A + S ++ + +YL D P+PDL IRTGG
Sbjct: 135 TLCIAADYGGRWDILQAANRAVAE------GSGEITEDSLGRYLMLGDAPEPDLFIRTGG 188
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AY+E F WPDF ++ F A+ Y R+RRFG S++
Sbjct: 189 ETRISNFLLWQMAYAELYFTDTLWPDFDKKSFDDAVASYQKRERRFGRTSEQ 240
>gi|15642254|ref|NP_231887.1| undecaprenyl diphosphate synthase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|147675134|ref|YP_001217771.1| undecaprenyl diphosphate synthase [Vibrio cholerae O395]
gi|153820413|ref|ZP_01973080.1| undecaprenyl diphosphate synthase [Vibrio cholerae NCTC 8457]
gi|9656817|gb|AAF95400.1| undecaprenyl diphosphate synthase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|126509041|gb|EAZ71635.1| undecaprenyl diphosphate synthase [Vibrio cholerae NCTC 8457]
gi|146317017|gb|ABQ21556.1| undecaprenyl diphosphate synthase [Vibrio cholerae O395]
gi|227014152|gb|ACP10362.1| undecaprenyl diphosphate synthase [Vibrio cholerae O395]
Length = 256
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 142/227 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA A+G PR GH+ G+ + ++ +A +GIK +T+FAFS NWRR
Sbjct: 18 PKHIAVIMDGNGRWAKAQGKPRVFGHKNGVAAVRKTISTSARLGIKAVTLFAFSSENWRR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L + L L KNN+++RVIG++ + + + +AE T NTG+
Sbjct: 78 PEEEVGVLMELFMTVLSTEIKKLHKNNLRLRVIGDKSRFSERLQTKIAQAEQLTASNTGM 137
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ IA NY + +I +A + + + + G + D+D + ++L +D+PD DL+IRT G
Sbjct: 138 VVNIAANYGGQWDILQATQALAEKVTQGELQPSDIDEDVFKQHLTMADLPDVDLLIRTSG 197
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+F+LWQ+AY+E F P +WP+F A+ + R+RRFG
Sbjct: 198 ECRISNFMLWQLAYAEMYFTPVFWPEFDENCLIEAVTWFVNRERRFG 244
>gi|307729335|ref|YP_003906559.1| undecaprenyl diphosphate synthase [Burkholderia sp. CCGE1003]
gi|307583870|gb|ADN57268.1| undecaprenyl diphosphate synthase [Burkholderia sp. CCGE1003]
Length = 260
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/233 (43%), Positives = 145/233 (62%), Gaps = 3/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH +G++ V A A G++ LT+FAFS NWRR
Sbjct: 17 PRHIAIIMDGNGRWATQRRLPRVAGHTRGVDAVRAAVEACARQGVEYLTLFAFSSENWRR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L + L++ L N I++RV+G+ D I +++ AE +T NT L
Sbjct: 77 PNDEVSFLMRLFVTALEREIGKLHANGIRLRVVGDLERFDTRIRDLIRRAETKTARNTRL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L IA NY R +I +A + + Q ++G+ +V+ +++L + P+PDL IRTG
Sbjct: 137 TLTIAANYGGRWDIMQATRKLVEQAAQAGTPV--EVNEETFSEHLSMAYAPEPDLFIRTG 194
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+R+S+FLLWQ+AY+EF F +WPDF + A+ Y R+RRFG S +
Sbjct: 195 GERRVSNFLLWQLAYTEFYFTDTFWPDFDADALGRAIASYGERERRFGRTSAQ 247
>gi|170699877|ref|ZP_02890907.1| undecaprenyl diphosphate synthase [Burkholderia ambifaria IOP40-10]
gi|170135199|gb|EDT03497.1| undecaprenyl diphosphate synthase [Burkholderia ambifaria IOP40-10]
Length = 260
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 142/233 (60%), Gaps = 3/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH +G++ +V A G++ LT+FAFS NWRR
Sbjct: 17 PRHIAIIMDGNGRWATERRLPRVAGHTRGVDAVRAVVEGCARAGVEYLTLFAFSSENWRR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L + L++ L N I++RV+G+ + I +++ AE +T NT L
Sbjct: 77 PNDEVSFLMRLFITALEREIGKLHANGIRLRVVGDLERFEPRIRELIRRAETKTARNTRL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L IA NY R +I +A K + Q + G DV A +L + P+PDL IRTG
Sbjct: 137 TLTIAANYGGRWDILQATKKLVEQAVREGREV--DVTEDAFAPHLAMAYAPEPDLFIRTG 194
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+R+S+FLLWQ+AY+EF F +YWPDF +A+ Y R+RRFG S +
Sbjct: 195 GEQRVSNFLLWQLAYAEFYFTDKYWPDFDGAALANAIASYTERERRFGRTSAQ 247
>gi|26988327|ref|NP_743752.1| undecaprenyl diphosphate synthase [Pseudomonas putida KT2440]
gi|148549388|ref|YP_001269490.1| undecaprenyl diphosphate synthase [Pseudomonas putida F1]
gi|42559803|sp|Q88MH6|UPPS_PSEPK RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|24983075|gb|AAN67216.1|AE016348_8 undecaprenyl diphosphate synthase [Pseudomonas putida KT2440]
gi|148513446|gb|ABQ80306.1| Undecaprenyl pyrophosphate synthetase [Pseudomonas putida F1]
gi|313500237|gb|ADR61603.1| UppS [Pseudomonas putida BIRD-1]
Length = 251
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 98/235 (41%), Positives = 145/235 (61%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
SS P H+ IIMDGN RWA R LP AGH+ G++ ++ A+ G++ LT+FAFS N
Sbjct: 10 SSVPRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAKSGVEVLTLFAFSSEN 69
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W+RP E+ L++L S L++ L +NNI +R+IG+R ++ ++EAE T N
Sbjct: 70 WQRPAEEVGALMELFFSALRREAKRLDENNISLRIIGDRSRFHPELQAAMREAEAVTAGN 129
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L IA NY + +I++A + + +++++G + D+ L+ L T D+P PDL IR
Sbjct: 130 NRFILQIAANYGGQWDIAQAAQRLAREVQAGHLRPEDITPGLLQTCLATGDLPLPDLCIR 189
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE R+S+FLLWQ+AY+E F YWPDF E +AL + R RRFG S++
Sbjct: 190 TGGEHRISNFLLWQLAYAELYFSDLYWPDFKHEAMRNALADFASRQRRFGKTSEQ 244
>gi|319900209|ref|YP_004159937.1| Undecaprenyl pyrophosphate synthetase [Bacteroides helcogenes P
36-108]
gi|319415240|gb|ADV42351.1| Undecaprenyl pyrophosphate synthetase [Bacteroides helcogenes P
36-108]
Length = 244
Score = 203 bits (517), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 143/232 (61%), Gaps = 2/232 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG R GH+ G E + I AA +G+K LT++ FS NW R
Sbjct: 13 PRHVAIIMDGNGRWAKQRGHERSYGHQVGAETVHIIAEEAARLGVKYLTLYTFSTENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L+ +++ + KNNI+ RVIG+ L ++ L + T NTG+
Sbjct: 73 PSDEVAALMGLLFDSIEEE--TFMKNNIRFRVIGDIGKLPVNVQQRLNACVEHTSRNTGM 130
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L +A +YSSR EI+ A + I + G + +DS L +++L T+ +PDPDL+IRTGG
Sbjct: 131 SLILALSYSSRWEITEATRQIAVLAQQGKLAPDQIDSKLFSQHLTTNFMPDPDLLIRTGG 190
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E RLS++LLWQ AYSE F YWPDF E A+ Y R+RR+G S++
Sbjct: 191 EIRLSNYLLWQAAYSELYFCDTYWPDFREEELCKAICDYQKRERRYGKTSEQ 242
>gi|300868262|ref|ZP_07112892.1| undecaprenyl pyrophosphate synthase [Oscillatoria sp. PCC 6506]
gi|300333744|emb|CBN58076.1| undecaprenyl pyrophosphate synthase [Oscillatoria sp. PCC 6506]
Length = 249
Score = 203 bits (517), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 138/227 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA +GLPR AGH +G E++ + GI+ LT +AFS NW R
Sbjct: 21 PKHVAVIMDGNGRWAKRQGLPRIAGHSRGASTLKELLRCCKDWGIEALTTYAFSTENWGR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P+ E+ L+ L + L++ + + +K++ +GN +L + ++ + +T N G+
Sbjct: 81 PLEEVDFLMSLFEGKLRQELREMVQEGVKIKFMGNLQALPKSLQAEIERSVAETEQNQGI 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY R+EI +A + I ++ G + ++D +L +YL T+DV DPDL+IRT G
Sbjct: 141 RFTVATNYGGREEIVQAARAIASQVKLGQLQPEEIDEALFKRYLYTADVCDPDLLIRTSG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E RLS+F+LWQ+AY+E WPDF R+ F AL Y R+RRFG
Sbjct: 201 EMRLSNFMLWQIAYAEIYITDTLWPDFDRKEFHRALYAYQQRNRRFG 247
>gi|329964679|ref|ZP_08301733.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides fluxus YIT
12057]
gi|328525079|gb|EGF52131.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides fluxus YIT
12057]
Length = 244
Score = 203 bits (517), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 142/232 (61%), Gaps = 2/232 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG R GH+ G E + I AA +G+K LT++ FS NW R
Sbjct: 13 PQHVAIIMDGNGRWAKQRGHERSYGHQAGAETVHIIAEEAARLGVKYLTLYTFSTENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L+ +++ + KNNI RVIG+ L ++ L + T NTG+
Sbjct: 73 PSDEVAALMGLLFDSIEEE--TFMKNNISFRVIGDIEKLPVNVQQRLNTCMEHTSQNTGM 130
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +YSS EI+ A + I ++ G + ++S LI+++L T+ +PDPDL+IRTGG
Sbjct: 131 CLVLALSYSSHWEITEASRQIAILVQQGKLTPDQINSELISQHLTTNFMPDPDLLIRTGG 190
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E RLS++LLWQ AYSE F YWPDF E A+ Y R+RRFG S++
Sbjct: 191 EIRLSNYLLWQAAYSELYFCDTYWPDFREEELCKAICDYQKRERRFGKTSEQ 242
>gi|327468392|gb|EGF13877.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sanguinis
SK330]
Length = 226
Score = 203 bits (517), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/226 (44%), Positives = 139/226 (61%), Gaps = 4/226 (1%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA R PR GH+ G+E + AA E+G++ LT++AFS NW RP E+S
Sbjct: 1 MDGNGRWAKKRMQPRVFGHKAGMETLQRVTIAAKEMGVQVLTVYAFSTENWSRPEKEVSF 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
++ L F + L KNN+K+++IG+ L + L++AE T+LNTGL L A N
Sbjct: 61 IMNLPVEFYDRYVPELHKNNVKIQMIGDTAKLPEATFEALEKAESLTKLNTGLILNFALN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLIIRTGGEKR 193
Y R EI++A+K I QD+ + D+ +I YL TS++P DPDL+IRT GE R
Sbjct: 121 YGGRYEINQAVKLIAQDVLDAKLSPGDITEEVIGNYLYTSNLPKMLRDPDLVIRTSGELR 180
Query: 194 LSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
LS+FL WQ AYSE F WPDF + A+ +Y+ R+RRFGG+
Sbjct: 181 LSNFLPWQSAYSELYFTDILWPDFDEKALKAAIAEYSRRNRRFGGV 226
>gi|289450413|ref|YP_003475248.1| di-trans,poly-cis-decaprenylcistransferase [Clostridiales genomosp.
BVAB3 str. UPII9-5]
gi|289184960|gb|ADC91385.1| di-trans,poly-cis-decaprenylcistransferase [Clostridiales genomosp.
BVAB3 str. UPII9-5]
Length = 261
Score = 203 bits (517), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 144/232 (62%), Gaps = 4/232 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA AR LPR GHR G + EIV AA ++GIK LT++AFS NW+R
Sbjct: 28 PEHVAIIMDGNGRWATARKLPRQLGHRAGAKNLKEIVRAAGQLGIKYLTVYAFSTENWQR 87
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E++ L++L F L N++++R G+ L ++ + AE + GL
Sbjct: 88 PKNEVNALMQLFVDFFLTYDAELALNDVRLRFAGDIDCLPPEVKKTINTAETNSSGRHGL 147
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IAFNY R E+ RA FQ + + + ++ S I+ L DVPDP++IIRTGG
Sbjct: 148 QLIIAFNYGGRRELLRA----FQKLAATGIPFDSLNESDISGALYLPDVPDPEMIIRTGG 203
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E RLS+FLLWQ AY+E P+ WP+F+ + ++ YN RDR+FGG++ +
Sbjct: 204 EMRLSNFLLWQSAYAELFSSPKLWPEFTEKDLIQIISAYNKRDRKFGGITSE 255
>gi|332686703|ref|YP_004456477.1| undecaprenyl pyrophosphate synthetase [Melissococcus plutonius ATCC
35311]
gi|332370712|dbj|BAK21668.1| undecaprenyl pyrophosphate synthetase [Melissococcus plutonius ATCC
35311]
Length = 261
Score = 203 bits (517), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 104/235 (44%), Positives = 145/235 (61%), Gaps = 4/235 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH++G+ +I A +GIK LT++AFS NW+R
Sbjct: 27 PKHIAIIMDGNGRWAQNRRLPRIAGHKEGMNTVKKITKHANHLGIKVLTLYAFSTENWKR 86
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L++L F L K N++V V+G + L +++A +QT+ NTG+
Sbjct: 87 PTEEVNFLMQLPVDFFDTFVPELIKENVQVHVMGYKEFLPKHTQKAVEQAIEQTKNNTGM 146
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R EI A+K I + IE+ + ++D +LI+ L T +P DP+L+I
Sbjct: 147 ILNFALNYGGRGEIVTAVKEIGEKIENKLLSIDEIDEALISDNLMTRFLPANLRDPELLI 206
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
RT GE+R+S+FLLWQ+AYSE F WPDF+ +L A+ + R RRFGGL K
Sbjct: 207 RTSGEERISNFLLWQIAYSELFFTDALWPDFNDKLLETAIASFQNRSRRFGGLKK 261
>gi|169350432|ref|ZP_02867370.1| hypothetical protein CLOSPI_01200 [Clostridium spiroforme DSM 1552]
gi|169292752|gb|EDS74885.1| hypothetical protein CLOSPI_01200 [Clostridium spiroforme DSM 1552]
Length = 251
Score = 203 bits (517), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 98/230 (42%), Positives = 141/230 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IMDGNGRWA R +PR GH +G + +I E+ ++ +T++AFS N+ R
Sbjct: 22 PKHIAFIMDGNGRWAKKRKMPRTYGHHEGTKTIRDIALKCNELKVEAMTVYAFSTENFAR 81
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE+ + KL K F L +NN+K+ IG+ + ++ +A +QT+ NTGL
Sbjct: 82 PDSEVQYIFKLPKDFFNSYMKELMENNVKICTIGHLEMAPKETQDIINKAIEQTKNNTGL 141
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L AF Y RDEI A K + + ++ G + + +++ L L TSD+PD DL++RT G
Sbjct: 142 KLCFAFIYGGRDEIVWASKKLAKRVKDGQIDADEINEKLFESELMTSDLPDVDLMVRTSG 201
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E+RLS+FLLWQ+AY+EFVF +WPDF+ + + QY RDRRFGGL
Sbjct: 202 EQRLSNFLLWQLAYAEFVFTDVFWPDFNDDELLKVIWQYQNRDRRFGGLK 251
>gi|168485973|ref|ZP_02710481.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae CDC1087-00]
gi|183570872|gb|EDT91400.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae CDC1087-00]
Length = 252
Score = 203 bits (517), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 104/238 (43%), Positives = 136/238 (57%), Gaps = 4/238 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ + P HIGIIMDGNGRWA R PR GH+ G+E + AA ++G+K +T++AFS
Sbjct: 15 VPTQVPAHIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQTVTKAANKLGVKVITVYAFST 74
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+ ++ L F L NN+++++IG L L +AE+ T+
Sbjct: 75 ENWTRPDQEVKFIMNLPVEFYDNYVPELHANNVRIQMIGETDRLPKQTFEALTKAEELTK 134
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----D 181
NTGL L A NY R EI++A+K I QD+ + D+ LI YL T +P D
Sbjct: 135 NNTGLILNFALNYGGRAEITQALKLISQDVLDAKINPGDITEELIGNYLFTQHLPKDLRD 194
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDLIIRT GE RLS+FL WQ AYSE F WPDF A+ YN R RRFGG+
Sbjct: 195 PDLIIRTSGELRLSNFLPWQGAYSELYFTDTLWPDFDEAALQEAILAYNRRHRRFGGV 252
>gi|149907549|ref|ZP_01896296.1| undecaprenyl diphosphate synthase [Moritella sp. PE36]
gi|149809219|gb|EDM69148.1| undecaprenyl diphosphate synthase [Moritella sp. PE36]
Length = 259
Score = 203 bits (517), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 96/239 (40%), Positives = 150/239 (62%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++++ S P H+ IIMDGNGRWA RG R GH +G++ ++V++A +GI++LT+FAF
Sbjct: 12 TLVNDSKPKHVAIIMDGNGRWAQQRGKMRVKGHHEGVKSVRQVVSSALAIGIESLTLFAF 71
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRRP +E+S L+KL + L + L KN I++++IG+ + I + EAE
Sbjct: 72 SSENWRRPEAEVSMLMKLFMTVLTREVKKLHKNQIRLKIIGDISAFSPAIQTKIAEAEAL 131
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NT L L IA NY + +I+ A K I +++G + +D ++ +++ ++ P D
Sbjct: 132 TCNNTKLTLNIAANYGGQSDIANAAKQIAIAVKTGEISLDQIDDKMLGQHIAMAEQPAVD 191
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRTGG+ R+S+FLLWQ+AY+E F WPDF F A+ + R+RRFGG ++
Sbjct: 192 LMIRTGGDHRISNFLLWQLAYAELYFTDTLWPDFDNIAFEDAIFNFVNRERRFGGTGEQ 250
>gi|229496176|ref|ZP_04389896.1| di-trans,poly-cis-decaprenylcistransferase [Porphyromonas
endodontalis ATCC 35406]
gi|229316754|gb|EEN82667.1| di-trans,poly-cis-decaprenylcistransferase [Porphyromonas
endodontalis ATCC 35406]
Length = 261
Score = 203 bits (517), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 96/234 (41%), Positives = 140/234 (59%), Gaps = 1/234 (0%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M + P H+ IIMDGNGRWA A+G R GH +G+ VAAAA+VGI LT++AFS
Sbjct: 1 MPCEAVPKHVAIIMDGNGRWATAQGKDRSYGHVEGVAALRRTVAAAAKVGINTLTVYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP +E+ L+ L+ ++ +++ IG+ L + ++ +QT
Sbjct: 61 SENWARPTAEVDALMALMAQSMEHYAPEFASEGVRILAIGDLHRLPESTRQAVERTMEQT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDS-SLIAKYLDTSDVPDPD 183
N+ + L + +YSSR E++ A++ + QD+ SG + D+ +A YL T +PDPD
Sbjct: 121 AHNSTITLVVCLSYSSRWELNHAVRTLAQDVASGKISPEDLSGDEPLAPYLSTYGIPDPD 180
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
L+IRTGGE R+S+FLL+Q+AYSE F P WPDF E AL +++ R RRFG
Sbjct: 181 LLIRTGGEFRISNFLLYQIAYSELYFCPTLWPDFGEEDLQKALYEFSQRHRRFG 234
>gi|313675875|ref|YP_004053871.1| undecaprenyl diphosphate synthase [Marivirga tractuosa DSM 4126]
gi|312942573|gb|ADR21763.1| undecaprenyl diphosphate synthase [Marivirga tractuosa DSM 4126]
Length = 242
Score = 203 bits (517), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 95/227 (41%), Positives = 141/227 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA +G R GH+ I+ + V AE+GI +L+++AFS NW R
Sbjct: 11 PKHVSVIMDGNGRWAKKQGAARVFGHKNAIKAVRDTVEGCAELGISHLSLYAFSTENWGR 70
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L++L+ S +K +L KN++K+ IG+ +L LK A++QT N GL
Sbjct: 71 PKNEVDALMQLLVSTIKSEMKTLMKNDVKLSSIGDIENLPGKCFNELKAAKEQTAQNKGL 130
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL +A NYS + +I++A K ++G + D+ S +L T+ +PDP+L+IRT G
Sbjct: 131 NLILALNYSGKWDITQACKKALVACKNGEMSDKDLTDSNFESFLSTAGIPDPELLIRTSG 190
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+F+LWQ+AYSE WPDF +E +AL Y R+RRFG
Sbjct: 191 EFRISNFMLWQLAYSEIYITEVLWPDFRKEHLINALRNYQTRERRFG 237
>gi|289168686|ref|YP_003446955.1| undecaprenyl diphosphate synthase [Streptococcus mitis B6]
gi|288908253|emb|CBJ23095.1| undecaprenyl diphosphate synthase [Streptococcus mitis B6]
Length = 252
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 105/238 (44%), Positives = 136/238 (57%), Gaps = 4/238 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ + P HIGIIMDGNGRWA R PR GH+ G+E + AA ++G+K +T++AFS
Sbjct: 15 VPTQVPAHIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQTVTKAANKLGVKVITVYAFST 74
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+ ++ L F L NN+K+++IG L L +AE+ T+
Sbjct: 75 ENWTRPDQEVKFIMNLPVEFYDNYVPELHANNVKIQMIGETDRLPKQTFEALTKAEELTK 134
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----D 181
NTGL L A NY R EI++A+K I QD+ + D+ LI YL T +P D
Sbjct: 135 NNTGLILNFALNYGGRAEITQALKLISQDVLDAKINPGDITEELIGNYLFTQHLPKELRD 194
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDLIIRT GE RLS+FL WQ AYSE F WPDF A+ YN R RRFGG+
Sbjct: 195 PDLIIRTSGELRLSNFLPWQGAYSELYFTDTLWPDFDEIALQEAILAYNRRHRRFGGV 252
>gi|241662947|ref|YP_002981307.1| undecaprenyl diphosphate synthase [Ralstonia pickettii 12D]
gi|240864974|gb|ACS62635.1| undecaprenyl diphosphate synthase [Ralstonia pickettii 12D]
Length = 258
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/236 (41%), Positives = 140/236 (59%), Gaps = 2/236 (0%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
++ P H+ +IMDGNGRWA R LPR AGH +G++ V AAA G+ LT+FAFS
Sbjct: 12 TADTPRHVAVIMDGNGRWATERHLPRVAGHSRGLDAVRATVEAAARRGVGYLTLFAFSSE 71
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E++ L+KL + L++ L N I++RV+G+ + I +++EAE +T
Sbjct: 72 NWRRPAEEVTFLMKLFMTALRREVSKLHDNGIRLRVVGDLSAFSPRIQLLIREAEAKTAA 131
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N GL + I NY R +I +A++ + + + ++A Y+ S P+PDL I
Sbjct: 132 NPGLTVTILANYGGRWDILQAMRALLA--AQPGIAPDAITEEMLAPYMALSYAPEPDLFI 189
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE+R+S+FLLWQ+AYSE F YWPDF A Y R+RRFG S +
Sbjct: 190 RTGGEQRISNFLLWQLAYSELYFTDRYWPDFDAAELDRAFAWYRNRERRFGRTSAQ 245
>gi|149017954|ref|ZP_01834413.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
SP23-BS72]
gi|194397226|ref|YP_002036961.1| undecaprenyl pyrophosphate synthase [Streptococcus pneumoniae G54]
gi|147931518|gb|EDK82496.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
SP23-BS72]
gi|194356893|gb|ACF55341.1| undecaprenyl pyrophosphate synthetase [Streptococcus pneumoniae
G54]
Length = 252
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 105/238 (44%), Positives = 136/238 (57%), Gaps = 4/238 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ + P HIGIIMDGNGRWA R PR GH+ G+E + AA ++G+K +T++AFS
Sbjct: 15 VPTQVPAHIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQTVTKAANKLGVKVITVYAFST 74
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+ ++ L F L NN+K+++IG L L +AE+ T+
Sbjct: 75 ENWTRPDQEVKFIMNLPVEFYDNYVPELHANNVKIQMIGETDRLPKQTFEALIKAEELTK 134
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----D 181
NTGL L A NY R EI++A+K I QD+ + D+ LI YL T +P D
Sbjct: 135 NNTGLILNFALNYGGRAEITQALKLISQDVLDAKINPGDITEELIGNYLFTQHLPKDLRD 194
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDLIIRT GE RLS+FL WQ AYSE F WPDF A+ YN R RRFGG+
Sbjct: 195 PDLIIRTSGELRLSNFLPWQGAYSELYFTDTLWPDFDEAALQEAILAYNRRHRRFGGV 252
>gi|332291477|ref|YP_004430086.1| undecaprenyl diphosphate synthase [Krokinobacter diaphorus
4H-3-7-5]
gi|332169563|gb|AEE18818.1| undecaprenyl diphosphate synthase [Krokinobacter diaphorus
4H-3-7-5]
Length = 246
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 104/242 (42%), Positives = 152/242 (62%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++A + P HI IIMDGNGRWA +GL R GH+KG + E V AAAE+G+ LT+
Sbjct: 3 VLAQINKEKLPQHIAIIMDGNGRWAKKQGLLRAVGHKKGSKAVREAVEAAAELGVPYLTL 62
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP +E+ L+ L+ S LKK +L+ N++ + IGN SL L E
Sbjct: 63 YAFSTENWNRPKAEVDTLMNLLVSSLKKEISTLQDNDVSLNTIGNTSSLPKKAQRELNEV 122
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
++T+ N L L +A +Y SR+E+ + +K I +++ + ++D S I ++L T D+P
Sbjct: 123 IEKTKNNKRLKLTLALSYGSREELIKTVKEISDKVKNNLISPAEIDESCINEHLYTHDMP 182
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
D DL+IRT GE+R+S+FLLWQ+AY+EF F WPDF +E A+ Y R+RRFG S
Sbjct: 183 DVDLLIRTSGEQRISNFLLWQIAYAEFYFTEILWPDFRKEHLHDAIYNYQKRERRFGKTS 242
Query: 241 KK 242
++
Sbjct: 243 EQ 244
>gi|229524259|ref|ZP_04413664.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae bv. albensis
VL426]
gi|229337840|gb|EEO02857.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae bv. albensis
VL426]
Length = 250
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 143/227 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA A+G PR GH+ G+ + ++ +A +GIK +T+FAFS NWRR
Sbjct: 12 PKHIAVIMDGNGRWAKAQGKPRVFGHKNGVAAVRKNISTSARLGIKAVTLFAFSSENWRR 71
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L + L L KNN+++RVIG++ + + + +AE T NTG+
Sbjct: 72 PEEEVGVLMELFMTVLSTEIKKLHKNNLRLRVIGDKSRFSERLQTKIAQAEQLTASNTGM 131
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ IA NY + +I +A + + + + G + D+D ++ ++L +D+PD DL+IRT G
Sbjct: 132 VVNIAANYGGQWDILQATQALAEKVTQGELQPSDIDEAVFKQHLTMADLPDVDLLIRTSG 191
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+F+LWQ+AY+E F P +WP+F A+ + R+RRFG
Sbjct: 192 ECRISNFMLWQLAYAEMYFTPVFWPEFDENCLIEAVTWFVNRERRFG 238
>gi|296120537|ref|YP_003628315.1| undecaprenyl diphosphate synthase [Planctomyces limnophilus DSM
3776]
gi|296012877|gb|ADG66116.1| undecaprenyl diphosphate synthase [Planctomyces limnophilus DSM
3776]
Length = 312
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/237 (40%), Positives = 143/237 (60%), Gaps = 2/237 (0%)
Query: 7 SSSP--PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
S++P P HI +IMDGNGRWA +GL R GHR+G++ +V +GI+ LT++ S
Sbjct: 71 SAAPVRPRHIAVIMDGNGRWAQRQGLERLEGHRRGVQSVRCVVEECVRLGIEQLTLYCLS 130
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP SE+ L+ L+K FL + + N++ VIG R L +D+L +
Sbjct: 131 SENWKRPKSELDFLMALLKEFLIAERPEIIRQNLQFSVIGRRTELPEDVLIEIDTTARIA 190
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+TG+ L +A NY SR EI A++ I D+ SG + +D LI+ L+T ++P+PDL
Sbjct: 191 ESHTGMRLCLAINYGSRAEIVDAVRWIAHDVASGRLSPEAIDEDLISARLNTREMPEPDL 250
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
+IRT GE RLS+FLLWQ++Y+E WP+F AL ++ R RRFGGL++
Sbjct: 251 VIRTAGEMRLSNFLLWQISYAELFVTTTLWPEFREPELQAALEAFSRRQRRFGGLNQ 307
>gi|187928371|ref|YP_001898858.1| undecaprenyl diphosphate synthase [Ralstonia pickettii 12J]
gi|187725261|gb|ACD26426.1| undecaprenyl diphosphate synthase [Ralstonia pickettii 12J]
Length = 258
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/236 (41%), Positives = 140/236 (59%), Gaps = 2/236 (0%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
++ P H+ +IMDGNGRWA R LPR AGH +G++ V AAA G+ LT+FAFS
Sbjct: 12 TADTPRHVAVIMDGNGRWATERHLPRVAGHSRGLDAVRATVEAAARRGVGYLTLFAFSSE 71
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E++ L+KL + L++ L N I++RV+G+ + I +++EAE +T
Sbjct: 72 NWRRPAEEVTFLMKLFMTALRREVSKLHDNGIRLRVVGDLSAFSPRIQLLIREAEAKTAA 131
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N GL + I NY R +I +A++ + + + ++A Y+ S P+PDL I
Sbjct: 132 NPGLTVTILANYGGRWDILQAMRALL--TAKPGIAPDAITEEMLAPYMALSYAPEPDLFI 189
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE+R+S+FLLWQ+AYSE F YWPDF A Y R+RRFG S +
Sbjct: 190 RTGGEQRISNFLLWQLAYSELYFTDRYWPDFDAAELDRAFAWYRNRERRFGRTSAQ 245
>gi|309782133|ref|ZP_07676863.1| di-trans,poly-cis-decaprenylcistransferase [Ralstonia sp.
5_7_47FAA]
gi|308919199|gb|EFP64866.1| di-trans,poly-cis-decaprenylcistransferase [Ralstonia sp.
5_7_47FAA]
Length = 258
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/236 (41%), Positives = 140/236 (59%), Gaps = 2/236 (0%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
++ P H+ +IMDGNGRWA R LPR AGH +G++ V AAA G+ LT+FAFS
Sbjct: 12 TADTPRHVAVIMDGNGRWATERHLPRVAGHSRGLDAVRATVEAAARRGVGYLTLFAFSSE 71
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E++ L+KL + L++ L N I++RV+G+ + I +++EAE +T
Sbjct: 72 NWRRPAEEVTFLMKLFMTALRREVSKLHDNGIRLRVVGDLSAFSPRIQLLIREAEAKTAA 131
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N GL + I NY R +I +A++ + + + ++A Y+ S P+PDL I
Sbjct: 132 NPGLTVTILANYGGRWDILQAMRALLA--AQPGIAPDAITEEMLAPYMALSYAPEPDLFI 189
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE+R+S+FLLWQ+AYSE F YWPDF A Y R+RRFG S +
Sbjct: 190 RTGGEQRISNFLLWQLAYSELYFTDRYWPDFDAAELDRAFAWYRNRERRFGRTSAQ 245
>gi|257090680|ref|ZP_05585041.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis CH188]
gi|312905220|ref|ZP_07764340.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0635]
gi|256999492|gb|EEU86012.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis CH188]
gi|310631457|gb|EFQ14740.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0635]
gi|315579286|gb|EFU91477.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0630]
Length = 271
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/235 (42%), Positives = 144/235 (61%), Gaps = 4/235 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH++G++ +I A+ +GIK LT++AFS NW+R
Sbjct: 27 PQHIAIIMDGNGRWAQNRRLPRIAGHKEGMDTVKKITKHASHLGIKVLTLYAFSTENWKR 86
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L++L F L K N+KV V+G + L +K A +QT+ NTG+
Sbjct: 87 PTDEVNFLMQLPVDFFDTFVPELIKENVKVNVMGYQEFLPSHTQDAVKRAIEQTKDNTGM 146
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY +R E+ A+K I ++ + + ++ IA +L T +P DP+L+I
Sbjct: 147 VLNFALNYGARAELLTAMKQIAAEVSEKAYTADEITEETIADHLMTGFLPTELRDPELLI 206
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
RT GE+R+S+FLLWQ+AYSE F WPDFS + A+ + R+RRFGGL +
Sbjct: 207 RTSGEERISNFLLWQIAYSELFFTKALWPDFSGDTLETAIASFQNRNRRFGGLKE 261
>gi|325571086|ref|ZP_08146658.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus
casseliflavus ATCC 12755]
gi|325156171|gb|EGC68357.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus
casseliflavus ATCC 12755]
Length = 266
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/236 (42%), Positives = 144/236 (61%), Gaps = 4/236 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH++G+E +I A+ +G+K LT++AFS NW+R
Sbjct: 27 PQHIAIIMDGNGRWAQNRRLPRVAGHKEGMETVKKITKHASHLGVKVLTLYAFSTENWKR 86
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L F L K N++V+V+G SL +K A DQT+ NTG+
Sbjct: 87 PNEEVDFLMQLPVDFFDTFVPELIKENVQVKVMGFTDSLPLHTQEAVKRAIDQTKDNTGM 146
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY SR EI A++ +++++ + ++ ++ +L T +P DP+L+I
Sbjct: 147 ILNFALNYGSRAEILTAVQALYEELSASGEALPELTEDMLGTHLMTGFLPSPLRDPELVI 206
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE+R+S+FLLWQ+AYSE F WPDF L A+ + R+RRFGGL +
Sbjct: 207 RTSGEERVSNFLLWQIAYSELFFTKALWPDFDAALLEDAIGSFQQRNRRFGGLKTE 262
>gi|315127160|ref|YP_004069163.1| undecaprenyl pyrophosphate synthetase [Pseudoalteromonas sp.
SM9913]
gi|315015674|gb|ADT69012.1| undecaprenyl pyrophosphate synthetase [Pseudoalteromonas sp.
SM9913]
Length = 259
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 95/227 (41%), Positives = 140/227 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA AR PR GH+KG++ + V ++GI++LT+FAFS NWRR
Sbjct: 20 PKHVAIIMDGNGRWAQARNRPRVYGHKKGVDAVRQSVQFCTKLGIQSLTLFAFSSENWRR 79
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L++L L K L KNN+K+ +IG+ + + + A++ T NTGL
Sbjct: 80 PEDEVNTLMELFLFVLSKEVKKLHKNNVKLTIIGDLSRFSESLRAKVHTAQELTANNTGL 139
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L +A NY R +++ A K + + +G + D+ IA+++ +D PDL+IRTGG
Sbjct: 140 HLNVAANYGGRWDMTHAAKQVALQVANGEIDPADITEEHIAQHMSMADQAQPDLLIRTGG 199
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+ R+S+FLLWQ AY+E F WPDF+ F A+ Y R+RRFG
Sbjct: 200 DVRISNFLLWQAAYAELYFTNTLWPDFNEAAFAEAIACYVARERRFG 246
>gi|149197638|ref|ZP_01874688.1| undecaprenyl pyrophosphate synthase [Lentisphaera araneosa
HTCC2155]
gi|149139208|gb|EDM27611.1| undecaprenyl pyrophosphate synthase [Lentisphaera araneosa
HTCC2155]
Length = 230
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/233 (41%), Positives = 139/233 (59%), Gaps = 4/233 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M S P HI IIMDGNGRWAA RGL R GH G+ V A + G+K LT++ FS
Sbjct: 1 MDLSVPKHIAIIMDGNGRWAAERGLDRIEGHTAGVSAVLRTVDACLKKGVKYLTLYTFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+R E+S L+ L+ L K + IK+ +G+ +L ++ L+E ++T+
Sbjct: 61 ENWKRSEEEVSALMMLLGEALSKYLPDFMEKGIKLATVGDVKALPKEVCAKLEEVREKTK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N + +A NY RDE+ R + + + S ++ + YLD++ +PDP+L+
Sbjct: 121 ENNQIVFNLALNYGGRDELIRTCRRVMD----AGIKSDELTEEIFETYLDSAGMPDPELL 176
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
IRT GE R+S+FLLWQ++YSEFV +PE+WPDF EL AL +N R+RRFGG
Sbjct: 177 IRTSGEMRISNFLLWQISYSEFVCMPEFWPDFGPELLDKALEDFNARERRFGG 229
>gi|323464628|gb|ADX76781.1| undecaprenyl diphosphate synthase [Staphylococcus pseudintermedius
ED99]
Length = 253
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/232 (42%), Positives = 142/232 (61%), Gaps = 5/232 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R +PR GH +G++ I AA+++G+K LT++AFS NW R
Sbjct: 24 PEHIAIIMDGNGRWAKQRKMPRIKGHYQGMQTIKTITRAASDLGVKYLTLYAFSTENWSR 83
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ ++ L +FL L + N++V +G L + + ++EA+ +T NTGL
Sbjct: 84 PDEEVNYIMGLPVNFLNTFLPELIEKNVRVETVGFIDELPEKTIQAIEEAKIKTADNTGL 143
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDS---SLIAKYLDTSDVPDPDLIIR 187
L A NY R EI I+ + +++ S D+D+ KYL T D PDP+L+IR
Sbjct: 144 TLIFAINYGGRAEIVHGIQTLMKEMRHAS--DQDIDALTEQHFQKYLMTRDYPDPELLIR 201
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
T GE+R+S+FL+WQ++YSEF+F + WPDF E + Y R RRFGGL
Sbjct: 202 TSGEQRVSNFLIWQLSYSEFIFNSKMWPDFDEEELKACIKTYQSRQRRFGGL 253
>gi|261379561|ref|ZP_05984134.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria subflava
NJ9703]
gi|284798035|gb|EFC53382.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria subflava
NJ9703]
Length = 248
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/235 (43%), Positives = 145/235 (61%), Gaps = 6/235 (2%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S+ P HI +IMDGNGRWA R LPR GH++G++ +V AE+G++ LT+FAFS N
Sbjct: 12 SAIPRHIAVIMDGNGRWAKKRFLPRVMGHKRGLDALENMVKHCAELGVRYLTVFAFSTEN 71
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+S L+ L L+K L NN+++RVIG+R + +IL ++ AE T N
Sbjct: 72 WRRPEEEVSFLMGLFLQALQKQVRRLHDNNMRLRVIGSRERFNAEILKGIEAAEALTANN 131
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
TGL L IA +Y R +I A + I G+ ++ +++YL D P+PDL IR
Sbjct: 132 TGLTLSIAADYGGRWDILHAANQL---IAEGAT---EITEEALSRYLMLGDAPEPDLFIR 185
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE R+S+FLLWQ+AY+E F WPDF+ + A+ + R+RRFG S++
Sbjct: 186 TGGETRISNFLLWQMAYAELYFTDTLWPDFNEKSLNEAIVSFQKRERRFGRTSEQ 240
>gi|300704227|ref|YP_003745830.1| undecaprenyl pyrophosphate synthetase (di-trans,
poly-cis-decaprenylcistransferase) [Ralstonia
solanacearum CFBP2957]
gi|299071891|emb|CBJ43220.1| undecaprenyl pyrophosphate synthetase (di-trans,
poly-cis-decaprenylcistransferase) [Ralstonia
solanacearum CFBP2957]
Length = 259
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/236 (41%), Positives = 143/236 (60%), Gaps = 2/236 (0%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
++ P H+ IIMDGNGRWA R LPR AGH +G++ +V AA G++ LT+FAFS
Sbjct: 12 TADTPRHVAIIMDGNGRWATERHLPRMAGHSRGLDAVRAVVEAAGNRGVRYLTLFAFSSE 71
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+S L+KL + L++ L ++ ++RV+G+ + + I +++EAE +T
Sbjct: 72 NWRRPAEEVSFLMKLFMTALRREVSKLHESGFRLRVVGDLSAFNPRIQLLIREAEAKTAA 131
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N+GL + IA NY R +I +A++ + D + + I+ YL + +PDL I
Sbjct: 132 NSGLTVTIAANYGGRWDILQAMRALVAD--QPDIAPEAITEEAISPYLALAYAAEPDLFI 189
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE+R+S+F+LWQ+AYSE F YWPDF A Y R+RRFG S +
Sbjct: 190 RTGGEQRISNFMLWQLAYSELYFTERYWPDFDAAEMDRAFAWYRNRERRFGRTSAQ 245
>gi|256823123|ref|YP_003147086.1| undecaprenyl diphosphate synthase [Kangiella koreensis DSM 16069]
gi|256796662|gb|ACV27318.1| undecaprenyl diphosphate synthase [Kangiella koreensis DSM 16069]
Length = 240
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 104/227 (45%), Positives = 133/227 (58%), Gaps = 7/227 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA ARG R GH+ G+E E+ E+G+K LT+FAFS NW R
Sbjct: 13 PQHIAIIMDGNGRWAQARGKKRVFGHKAGMERAREMAETCGELGVKFLTLFAFSSENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L + LK L KNN+K++VIG++ D + + +AE T N GL
Sbjct: 73 PAEEVSFLMDLFATSLKNESKKLNKNNVKLKVIGDKAGFDKGLQKAIDKAEALTADNDGL 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I +A + + ++ + + KYL T P+PDL+IRTGG
Sbjct: 133 TLNIAANYGGRWDIMQASQQLL-------TSGRELTEANLVKYLATGTAPEPDLLIRTGG 185
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
EKR+S+FLLWQ AYSE F WPDF E AL Y R RRFG
Sbjct: 186 EKRISNFLLWQAAYSELYFSDVLWPDFDGEQLKLALADYAQRQRRFG 232
>gi|134296024|ref|YP_001119759.1| undecaprenyl pyrophosphate synthetase [Burkholderia vietnamiensis
G4]
gi|134139181|gb|ABO54924.1| Undecaprenyl pyrophosphate synthetase [Burkholderia vietnamiensis
G4]
Length = 260
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 141/233 (60%), Gaps = 3/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH +G++ +V A G++ LT+FAFS NWRR
Sbjct: 17 PRHIAIIMDGNGRWATERRLPRVAGHTRGVDAVRSVVEGCARAGVQYLTLFAFSSENWRR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L + L++ L N I++RV+G+ + I +++ AE +T NT L
Sbjct: 77 PNDEVSFLMRLFITALEREIGKLHANGIRLRVVGDLDRFEPRIRDLIRRAETKTARNTRL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L IA NY R +I +A K + Q + G DV A +L + P+PDL IRTG
Sbjct: 137 TLTIAANYGGRWDILQATKKLVAQAVREGREV--DVTEEAFAPHLAMAYAPEPDLFIRTG 194
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+R+S+FLLWQ+AY+EF F +YWPDF A+ Y R+RRFG S +
Sbjct: 195 GEQRVSNFLLWQLAYAEFYFTDKYWPDFDGAALADAIASYTERERRFGRTSAQ 247
>gi|257784512|ref|YP_003179729.1| undecaprenyl diphosphate synthase [Atopobium parvulum DSM 20469]
gi|257473019|gb|ACV51138.1| undecaprenyl diphosphate synthase [Atopobium parvulum DSM 20469]
Length = 259
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/229 (42%), Positives = 135/229 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA ARGL R GH+ G+ E V + +G+ L++++FS NW+R
Sbjct: 30 PSHVSIIMDGNGRWATARGLDRTEGHKAGVLSLREAVTTSVRLGLDVLSVYSFSTENWKR 89
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L L K + N+K+R G+ +L + + D+T NTG+
Sbjct: 90 PQHEVDLLMRLFAETLLKELPLFYQENVKLRFFGDLEALPEKTRKTFQRGLDETAQNTGM 149
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY SR E++RA + I G V + V S KYL T+ +PDPDL+IRT G
Sbjct: 150 TFALAVNYGSRAELTRAAVFLANQIAEGKVSADSVTPSDFEKYLYTAGLPDPDLLIRTSG 209
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS++LLWQ+AYSE YWPDFS+ A+ Y R+RRFGG+
Sbjct: 210 ELRLSNYLLWQLAYSELYVTQTYWPDFSKWDVLRAIKDYQGRERRFGGV 258
>gi|225077040|ref|ZP_03720239.1| hypothetical protein NEIFLAOT_02092 [Neisseria flavescens
NRL30031/H210]
gi|224951597|gb|EEG32806.1| hypothetical protein NEIFLAOT_02092 [Neisseria flavescens
NRL30031/H210]
Length = 248
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/235 (43%), Positives = 145/235 (61%), Gaps = 6/235 (2%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S+ P HI +IMDGNGRWA R LPR GH++G++ +V AE+G++ LT+FAFS N
Sbjct: 12 SAIPRHIAVIMDGNGRWAKKRFLPRVMGHKRGLDALENMVKHCAELGVRYLTVFAFSTEN 71
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+S L+ L L+K L NN+++RVIG+R + +IL ++ AE T N
Sbjct: 72 WRRPEEEVSFLMGLFLQALQKQVRRLHDNNMRLRVIGSRERFNAEILKGIEAAEALTANN 131
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
TGL L IA +Y R +I +A + I G ++ +++YL D P+PDL IR
Sbjct: 132 TGLTLSIAADYGGRWDILQAANQL---IAEGVT---EITEEALSRYLMLGDAPEPDLFIR 185
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE R+S+FLLWQ+AY+E F WPDF+ + A+ + R+RRFG S++
Sbjct: 186 TGGETRISNFLLWQMAYAELYFTDTLWPDFNEKSLNEAIASFQKRERRFGRTSEQ 240
>gi|170723239|ref|YP_001750927.1| undecaprenyl diphosphate synthase [Pseudomonas putida W619]
gi|169761242|gb|ACA74558.1| undecaprenyl diphosphate synthase [Pseudomonas putida W619]
Length = 251
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/235 (41%), Positives = 146/235 (62%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
SS P H+ IIMDGN RWA R LP AGH+ G++ ++ A+ G++ LT+FAFS N
Sbjct: 10 SSVPRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAKSGVEVLTLFAFSSEN 69
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W+RP E+ L++L S L++ L +NNI +R+IG+R ++ ++EAE QT +
Sbjct: 70 WQRPAEEVGALMELFFSALRREAKRLNENNISLRIIGDRSRFHPELQAAMREAEAQTAGS 129
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L IA NY + +I++A + + +++++G + D+ L+ L T ++P PDL IR
Sbjct: 130 NRFILQIAANYGGQWDIAQAAQRLAREVQAGHLRPDDITPGLLQACLATGELPLPDLCIR 189
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE R+S+FLLWQ+AY+E F YWPDF E +AL + R RRFG S++
Sbjct: 190 TGGEHRISNFLLWQLAYAELYFSDLYWPDFKHEAMRNALADFASRQRRFGKTSEQ 244
>gi|300173488|ref|YP_003772654.1| undecaprenyl diphosphate synthase [Leuconostoc gasicomitatum LMG
18811]
gi|299887867|emb|CBL91835.1| undecaprenyl diphosphate synthase [Leuconostoc gasicomitatum LMG
18811]
Length = 259
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/235 (41%), Positives = 144/235 (61%), Gaps = 3/235 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
PDH+ IIMDGNGRWA R +PR AGH+ + +I AA+++G+K LT++AFS NW R
Sbjct: 20 PDHVAIIMDGNGRWAKQRLMPRIAGHKTAMNTVKKIATAASDLGVKVLTLYAFSTENWSR 79
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L++L F L KNNI+V+++G+ L +K A +QT TG+
Sbjct: 80 PKDEVNFLMQLPIDFFNDFVPDLVKNNIRVQIMGDINGLPKGTQIAVKNAINQTAKGTGM 139
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD---PDLIIR 187
L A NY + EI A K + Q + SG + +D++++L ++ L T D+ D PDL+IR
Sbjct: 140 ILNFALNYGGQVEIVEAAKTLAQQVASGEIVPNDINATLFSRALQTGDLGDLAAPDLMIR 199
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
T GE RLS+F+ +Q AY+E F WPD++ + A+ + RDRRFGGL+ K
Sbjct: 200 TSGELRLSNFMPYQAAYTELYFTDVLWPDYTADNLVEAITSFTSRDRRFGGLNDK 254
>gi|300870156|ref|YP_003785027.1| undecaprenyl pyrophosphate synthetase [Brachyspira pilosicoli
95/1000]
gi|300687855|gb|ADK30526.1| undecaprenyl pyrophosphate synthetase [Brachyspira pilosicoli
95/1000]
Length = 241
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 108/232 (46%), Positives = 142/232 (61%), Gaps = 3/232 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA AR R GHR G E IV A E+ IK LT++AFS NW+R
Sbjct: 10 PSHVAIIMDGNGRWAKARNKSRSFGHRAGSENVINIVEACCELNIKYLTLYAFSTENWKR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL---N 127
P E L KL+K F KK L NNI V+ IG+ D + ++E E +T N
Sbjct: 70 PEEEKKALFKLLKEFYKKEIKRLISNNILVKHIGDISKFPKDTIETIEETEKETLEKCKN 129
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L + +A NY RDE+ AIKN++ D+ S + D+D + I YL T D+PDPD +IR
Sbjct: 130 PILTVVLALNYGFRDELKTAIKNMYSDVLSNKINIEDIDENSIGNYLYTKDIPDPDFVIR 189
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
T GE RLS+FL++Q +YSE F WPDFS++ F A+ +Y+ R+RR+GGL
Sbjct: 190 TSGEHRLSNFLMYQASYSELYFTDILWPDFSKDNFKKAIEEYSNRNRRYGGL 241
>gi|329850620|ref|ZP_08265465.1| di-trans,poly-cis-decaprenylcistransferase [Asticcacaulis
biprosthecum C19]
gi|328840935|gb|EGF90506.1| di-trans,poly-cis-decaprenylcistransferase [Asticcacaulis
biprosthecum C19]
Length = 253
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 91/229 (39%), Positives = 143/229 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG R GH+ G++ + AA ++G+ ++T+FAFS NWRR
Sbjct: 16 PFHVAIIMDGNGRWAKERGQIRTIGHKAGVDALKRTITAAVDLGVTHMTVFAFSTENWRR 75
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+S+L+ L+++F+K L++ + VR+IG L DI+ ++ +A +QT+ N+
Sbjct: 76 PEAEVSDLMGLLRAFIKADLARLRREGVCVRIIGQEDGLPRDIVGMVADAHEQTKHNSRF 135
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY ++ +I A + + Q G++ + + + A L T +P DL+IRT G
Sbjct: 136 FLQVALNYGAQADIVEAARRLAQSARDGAITPESITADIFANSLSTHGLPPLDLLIRTSG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+FLLW+ AY+EFVF WPD+ + AL+ + R+RRFG +
Sbjct: 196 EHRLSNFLLWEAAYAEFVFQDILWPDYGHDALKQALDIFARRNRRFGAV 244
>gi|261879014|ref|ZP_06005441.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella bergensis
DSM 17361]
gi|270334398|gb|EFA45184.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella bergensis
DSM 17361]
Length = 255
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 145/232 (62%), Gaps = 2/232 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWAA +G R GH+ G++ I + +G+K LT++ FS NW R
Sbjct: 10 PRHIAIIMDGNGRWAAEQGKERSFGHQAGVDTVRCITSECTRLGVKFLTLYTFSTENWSR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EIS L+ L+ + L+ + KNN++ RV+G L D+ LKE D T N+ +
Sbjct: 70 PQDEISALMGLVLTSLEDEIFM--KNNVRFRVVGEMERLPKDVQDKLKETMDHTAKNSAM 127
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ +A +YSSR EI++A + I +++++G + D++ ++ +++ T+ +PDPDL+IRTGG
Sbjct: 128 TMVVALSYSSRWEITKATREIAEEVKAGKLRPEDINEDIVNEHMATNFMPDPDLLIRTGG 187
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+ R+S+++LWQ+AYSE F YWP F + A+ Y R RRFG ++
Sbjct: 188 DLRISNYMLWQIAYSELYFCDTYWPAFREKDLHRAIVSYQNRQRRFGKTEEQ 239
>gi|332967740|gb|EGK06847.1| di-trans,poly-cis-decaprenylcistransferase [Kingella kingae ATCC
23330]
Length = 250
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 104/232 (44%), Positives = 144/232 (62%), Gaps = 6/232 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R LPR GH+KG++V E + G+K LT+FAFS NWRR
Sbjct: 16 PHHVAIIMDGNGRWAKKRFLPRVMGHKKGLDVLEEQCRICNKAGVKFLTVFAFSTENWRR 75
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L + L+K ++ KNN+++RVIG+R + +I + +AE T NTGL
Sbjct: 76 PAEEVSFLMGLFLTALQKKIVNMHKNNMRLRVIGDRTRFNAEIQRSIDKAEQLTAQNTGL 135
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA +Y R +I +A + I G +H +S L +K + D P+PDL IRTGG
Sbjct: 136 TLTIAADYGGRWDILQAANAL---IAEGK--THISESDLASKLM-LGDAPEPDLFIRTGG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+F+LWQ+AY+EF F WPDF+ AL + R+RRFG S++
Sbjct: 190 ETRISNFMLWQMAYAEFYFTDVLWPDFNESDMHQALLSFTQRERRFGRTSEQ 241
>gi|261364374|ref|ZP_05977257.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria mucosa ATCC
25996]
gi|288567642|gb|EFC89202.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria mucosa ATCC
25996]
Length = 248
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/235 (42%), Positives = 146/235 (62%), Gaps = 6/235 (2%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+S P HI +IMDGNGRWA R LPR GH++G++V +V A++G++ LT+FAFS N
Sbjct: 12 TSVPKHIAVIMDGNGRWAKKRFLPRVMGHKRGLDVLENMVKHCAKLGVQYLTVFAFSTEN 71
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+S L+ L L+K L +NN++++V+G+R + IL ++EAE T N
Sbjct: 72 WRRPEDEVSFLMGLFLQALQKQVRRLHENNMRLKVLGSRERFNRQILQGIEEAEALTANN 131
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
TGL L IA +Y R +I +A + + S ++ +AK+L D P+PDL IR
Sbjct: 132 TGLTLSIAADYGGRWDILQAANKLIAEGVS------EITEDALAKHLMLGDAPEPDLFIR 185
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE R+S+FLLWQ+AY+E F WPDF + A+ + R+RRFG S++
Sbjct: 186 TGGETRISNFLLWQMAYAELYFTDTLWPDFDSKALDDAVASFQKRERRFGRTSEQ 240
>gi|257453212|ref|ZP_05618511.1| undecaprenyl pyrophosphate synthetase [Fusobacterium sp. 3_1_5R]
gi|257467198|ref|ZP_05631509.1| undecaprenyl pyrophosphate synthetase [Fusobacterium gonidiaformans
ATCC 25563]
gi|315918328|ref|ZP_07914568.1| undecaprenyl pyrophosphate synthetase [Fusobacterium gonidiaformans
ATCC 25563]
gi|317059746|ref|ZP_07924231.1| undecaprenyl pyrophosphate synthetase [Fusobacterium sp. 3_1_5R]
gi|313685422|gb|EFS22257.1| undecaprenyl pyrophosphate synthetase [Fusobacterium sp. 3_1_5R]
gi|313692203|gb|EFS29038.1| undecaprenyl pyrophosphate synthetase [Fusobacterium gonidiaformans
ATCC 25563]
Length = 230
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/237 (42%), Positives = 141/237 (59%), Gaps = 7/237 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
MS P HI IIMDGNGRWA R LPR GHR+G + +I+ A E+GI+ LT++AFS
Sbjct: 1 MSIEVPKHIAIIMDGNGRWAKKRALPRTLGHREGAKTLQKILKYAGELGIQYLTVYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW R E+S L+KL ++K +L KNN++ V G + + +L +K E++T
Sbjct: 61 ENWNRSEEEVSALMKLFSKYIKNEEKNLMKNNVRFLVSGRKERVSSSLLEEIKALEEKTS 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
NTG+ IAFNY R EI A+ + Q+ + + D+ S L ++PDP+LI
Sbjct: 121 RNTGITFNIAFNYGGRAEIVDAVNQLLQE-KKEKISEEDISSHLY------QNIPDPELI 173
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRT GE R+S+FLLWQ+AY+E WPDF + AL + R+RRFGG+ +K
Sbjct: 174 IRTSGEFRISNFLLWQLAYAEIYVTDTLWPDFDEKSLDLALENFQKRERRFGGVYEK 230
>gi|302346064|ref|YP_003814417.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella
melaninogenica ATCC 25845]
gi|302150057|gb|ADK96319.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella
melaninogenica ATCC 25845]
Length = 250
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 93/235 (39%), Positives = 146/235 (62%), Gaps = 5/235 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI I MDGNGRWA R PR GH+ G++ I + +G+K LT++ FS NW R
Sbjct: 11 PQHIAITMDGNGRWATERNKPRSYGHQAGVDTVRRITSECVRLGVKFLTLYTFSTENWNR 70
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EI+ L+ L+ + L+ + KNN++ RVIG+ L +++ L+E E+ T N+ +
Sbjct: 71 PTDEIAALMGLVLTSLEDEIF--MKNNVRFRVIGDMARLPEEVQKKLRETEEHTAKNSAM 128
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGS---VCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+ +A +YS+R EI++A++ I + ++ S + + +I+++L+T+ +PDPDL+IR
Sbjct: 129 TMVVALSYSARWEIAKAMREIVAEHQANSSEPLRPETITEEVISEHLETNFMPDPDLLIR 188
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE R+S++LLWQ+AYSE F YWPDF + A+ + R RRFG K+
Sbjct: 189 TGGELRISNYLLWQIAYSELYFCDTYWPDFDEQDLQKAIASFQSRQRRFGKTEKQ 243
>gi|46907541|ref|YP_013930.1| undecaprenyl pyrophosphate synthase [Listeria monocytogenes
serotype 4b str. F2365]
gi|226223916|ref|YP_002758023.1| undecaprenyl diphosphate synthase [Listeria monocytogenes
Clip81459]
gi|254824626|ref|ZP_05229627.1| undecaprenyl diphosphate synthase [Listeria monocytogenes FSL
J1-194]
gi|254852634|ref|ZP_05241982.1| undecaprenyl diphosphate synthase [Listeria monocytogenes FSL
R2-503]
gi|254932370|ref|ZP_05265729.1| undecaprenyl diphosphate synthase [Listeria monocytogenes HPB2262]
gi|254992873|ref|ZP_05275063.1| undecaprenyl diphosphate synthase [Listeria monocytogenes FSL
J2-064]
gi|300765445|ref|ZP_07075427.1| undecaprenyl diphosphate synthase [Listeria monocytogenes FSL
N1-017]
gi|73920268|sp|Q720A7|UPPS_LISMF RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|46880809|gb|AAT04107.1| undecaprenyl diphosphate synthase [Listeria monocytogenes serotype
4b str. F2365]
gi|225876378|emb|CAS05087.1| Putative undecaprenyl diphosphate synthase [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|258605950|gb|EEW18558.1| undecaprenyl diphosphate synthase [Listeria monocytogenes FSL
R2-503]
gi|293583926|gb|EFF95958.1| undecaprenyl diphosphate synthase [Listeria monocytogenes HPB2262]
gi|293593864|gb|EFG01625.1| undecaprenyl diphosphate synthase [Listeria monocytogenes FSL
J1-194]
gi|300513882|gb|EFK40947.1| undecaprenyl diphosphate synthase [Listeria monocytogenes FSL
N1-017]
gi|328475038|gb|EGF45826.1| undecaprenyl pyrophosphate synthase [Listeria monocytogenes 220]
Length = 252
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/229 (44%), Positives = 140/229 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R LPR AGH++G++V + A +GI LT++AFS NW+R
Sbjct: 24 PRHVAIIMDGNGRWAKKRFLPRIAGHKEGMDVVKRVTRYANAIGIDVLTLYAFSTENWKR 83
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL F L + N++V V+G R +L + + +++A T TGL
Sbjct: 84 PTDEVDFLMKLPVEFFDSFVPELIEENVRVNVMGYRENLPNHTMRAVEKAIADTAHCTGL 143
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY R EI A K +++E + D+ + +L +S + DPDL+IRT G
Sbjct: 144 TLNFALNYGGRSEIITAAKEAMKELELEGKSADDLTEEKLNDHLMSSGLGDPDLLIRTSG 203
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+F+LWQ+AYSEF F +WPDFS+E F A+ +Y R RRFGGL
Sbjct: 204 ELRLSNFMLWQLAYSEFYFTDTHWPDFSKEDFLQAIIEYQNRSRRFGGL 252
>gi|229549340|ref|ZP_04438065.1| Di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
ATCC 29200]
gi|255972049|ref|ZP_05422635.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis T1]
gi|255975106|ref|ZP_05425692.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis T2]
gi|256956760|ref|ZP_05560931.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis DS5]
gi|256963657|ref|ZP_05567828.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis
HIP11704]
gi|257079715|ref|ZP_05574076.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis JH1]
gi|257087520|ref|ZP_05581881.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis D6]
gi|257416728|ref|ZP_05593722.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis
AR01/DG]
gi|257421877|ref|ZP_05598867.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis X98]
gi|294779074|ref|ZP_06744486.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
PC1.1]
gi|300860444|ref|ZP_07106531.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TUSoD Ef11]
gi|307270753|ref|ZP_07552043.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX4248]
gi|307271599|ref|ZP_07552871.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0855]
gi|307285655|ref|ZP_07565792.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0860]
gi|307287639|ref|ZP_07567682.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0109]
gi|312899912|ref|ZP_07759230.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0470]
gi|312953568|ref|ZP_07772405.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0102]
gi|229305577|gb|EEN71573.1| Di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
ATCC 29200]
gi|255963067|gb|EET95543.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis T1]
gi|255967978|gb|EET98600.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis T2]
gi|256947256|gb|EEU63888.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis DS5]
gi|256954153|gb|EEU70785.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis
HIP11704]
gi|256987745|gb|EEU75047.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis JH1]
gi|256995550|gb|EEU82852.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis D6]
gi|257158556|gb|EEU88516.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis
ARO1/DG]
gi|257163701|gb|EEU93661.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis X98]
gi|294453854|gb|EFG22244.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
PC1.1]
gi|300849483|gb|EFK77233.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TUSoD Ef11]
gi|306501377|gb|EFM70680.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0109]
gi|306502623|gb|EFM71889.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0860]
gi|306511871|gb|EFM80869.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0855]
gi|306512867|gb|EFM81509.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX4248]
gi|310628406|gb|EFQ11689.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0102]
gi|311292908|gb|EFQ71464.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0470]
gi|315025323|gb|EFT37255.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX2137]
gi|315032668|gb|EFT44600.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0017]
gi|315035931|gb|EFT47863.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0027]
gi|315144822|gb|EFT88838.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX2141]
gi|315148511|gb|EFT92527.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX4244]
gi|315150079|gb|EFT94095.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0012]
gi|315151980|gb|EFT95996.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0031]
gi|315155417|gb|EFT99433.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0043]
gi|315159285|gb|EFU03302.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0312]
gi|315165035|gb|EFU09052.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX1302]
gi|323481474|gb|ADX80913.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
62]
gi|327535768|gb|AEA94602.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
OG1RF]
gi|329572594|gb|EGG54235.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX1467]
Length = 271
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/235 (42%), Positives = 144/235 (61%), Gaps = 4/235 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH++G++ +I A+ +G+K LT++AFS NW+R
Sbjct: 27 PQHIAIIMDGNGRWAQNRRLPRIAGHKEGMDTVKKITKHASHLGVKVLTLYAFSTENWKR 86
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L++L F L K N+KV V+G + L +K A +QT+ NTG+
Sbjct: 87 PTDEVNFLMQLPVDFFDTFVPELIKENVKVNVMGYQEFLPSHTQDAVKRAIEQTKDNTGM 146
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY +R E+ A+K I ++ + + ++ IA +L T +P DP+L+I
Sbjct: 147 VLNFALNYGARAELLTAMKQIAAEVSEKTYTADEITEETIADHLMTGFLPTELRDPELLI 206
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
RT GE+R+S+FLLWQ+AYSE F WPDFS + A+ + R+RRFGGL +
Sbjct: 207 RTSGEERISNFLLWQIAYSELFFTKALWPDFSGDTLETAIASFQNRNRRFGGLKE 261
>gi|257464981|ref|ZP_05629352.1| undecaprenyl pyrophosphate synthetase [Actinobacillus minor 202]
gi|257450641|gb|EEV24684.1| undecaprenyl pyrophosphate synthetase [Actinobacillus minor 202]
Length = 237
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/228 (42%), Positives = 141/228 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R GH+ G++ V+ AA+ GIK LT++AFS NW R
Sbjct: 9 PKHVAIIMDGNGRWAKQQGKLRVFGHQNGVKAVRSAVSFAAKHGIKVLTLYAFSSENWSR 68
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+S L+ L L L KNNI++++IG++ + + + E+E T NTGL
Sbjct: 69 PEAEVSALMALFMKALDSEVKKLHKNNIRLKIIGDKSGFSETLQKRITESEQLTATNTGL 128
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY S +I++A + + ++ G + D+ +L L T D P DL+IRT G
Sbjct: 129 ILNIAANYGSYWDITQAAQKMAVKVKLGEISVSDITPTLFQNELVTEDQPQVDLLIRTSG 188
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R+S+FLLWQ+AY+E F P WPDF+ ++F A+ Y R+RRFGG
Sbjct: 189 EQRISNFLLWQIAYAELFFTPVLWPDFNDQVFSEAIMAYQQRERRFGG 236
>gi|332311758|gb|EGJ24853.1| Undecaprenyl pyrophosphate synthase [Listeria monocytogenes str.
Scott A]
Length = 253
Score = 202 bits (515), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/229 (44%), Positives = 140/229 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R LPR AGH++G++V + A +GI LT++AFS NW+R
Sbjct: 25 PRHVAIIMDGNGRWAKKRFLPRIAGHKEGMDVVKRVTRYANAIGIDVLTLYAFSTENWKR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL F L + N++V V+G R +L + + +++A T TGL
Sbjct: 85 PTDEVDFLMKLPVEFFDSFVPELIEENVRVNVMGYRENLPNHTMRAVEKAIADTAHCTGL 144
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY R EI A K +++E + D+ + +L +S + DPDL+IRT G
Sbjct: 145 TLNFALNYGGRSEIITAAKEAMKELELEGKSADDLTEEKLNDHLMSSGLGDPDLLIRTSG 204
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+F+LWQ+AYSEF F +WPDFS+E F A+ +Y R RRFGGL
Sbjct: 205 ELRLSNFMLWQLAYSEFYFTDTHWPDFSKEDFLQAIIEYQNRSRRFGGL 253
>gi|258621000|ref|ZP_05716034.1| Undecaprenyl diphosphate synthase [Vibrio mimicus VM573]
gi|262170775|ref|ZP_06038453.1| undecaprenyl pyrophosphate synthetase [Vibrio mimicus MB-451]
gi|258586388|gb|EEW11103.1| Undecaprenyl diphosphate synthase [Vibrio mimicus VM573]
gi|261891851|gb|EEY37837.1| undecaprenyl pyrophosphate synthetase [Vibrio mimicus MB-451]
Length = 250
Score = 202 bits (515), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 90/227 (39%), Positives = 144/227 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA A+G PR GH+ G+ + ++ +A +GIK +T+FAFS NWRR
Sbjct: 12 PKHIAVIMDGNGRWAKAQGKPRVFGHKNGVAAVRKTISTSARLGIKAVTLFAFSSENWRR 71
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L + L L KNN+++RVIG++ + + + +AE T NTG+
Sbjct: 72 PEEEVGVLMELFITVLSTEIKKLHKNNLRLRVIGDKSRFSERLQSKIAQAEALTASNTGM 131
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ IA NY + +I +A + + + + G + ++D ++I ++L +D+P+ DL+IRT G
Sbjct: 132 VVNIAANYGGKWDILQATQALAEKVAQGDLLPAEIDEAMIKQHLTMADLPEVDLLIRTSG 191
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+F+LWQ+AY+E F P +WP+F A+ + R+RRFG
Sbjct: 192 ECRISNFMLWQLAYAEMYFTPVFWPEFDENCLIEAVTWFVNRERRFG 238
>gi|115352099|ref|YP_773938.1| undecaprenyl diphosphate synthase [Burkholderia ambifaria AMMD]
gi|171318102|ref|ZP_02907271.1| undecaprenyl diphosphate synthase [Burkholderia ambifaria MEX-5]
gi|172060963|ref|YP_001808615.1| undecaprenyl diphosphate synthase [Burkholderia ambifaria MC40-6]
gi|115282087|gb|ABI87604.1| Undecaprenyl pyrophosphate synthetase [Burkholderia ambifaria AMMD]
gi|171096726|gb|EDT41611.1| undecaprenyl diphosphate synthase [Burkholderia ambifaria MEX-5]
gi|171993480|gb|ACB64399.1| undecaprenyl diphosphate synthase [Burkholderia ambifaria MC40-6]
Length = 260
Score = 202 bits (515), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 141/233 (60%), Gaps = 3/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH +G++ +V A G++ LT+FAFS NWRR
Sbjct: 17 PRHIAIIMDGNGRWATERRLPRVAGHTRGVDAVRAVVEGCARAGVEYLTLFAFSSENWRR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L + L++ L N I++RV+G+ + I +++ AE +T NT L
Sbjct: 77 PNDEVSFLMRLFITALEREIGKLHANGIRLRVVGDLERFEPRIRELIRRAETKTARNTRL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L IA NY R +I +A K + Q + G DV A +L + P+PDL IRTG
Sbjct: 137 TLTIAANYGGRWDILQATKKLVEQAVREGREV--DVTEDAFAPHLAMAYAPEPDLFIRTG 194
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+R+S+FLLWQ+AY+EF F +YWPDF A+ Y R+RRFG S +
Sbjct: 195 GEQRVSNFLLWQLAYAEFYFTDKYWPDFDGAALADAIASYTERERRFGRTSAQ 247
>gi|325267096|ref|ZP_08133765.1| di-trans,poly-cis-decaprenylcistransferase [Kingella denitrificans
ATCC 33394]
gi|324981449|gb|EGC17092.1| di-trans,poly-cis-decaprenylcistransferase [Kingella denitrificans
ATCC 33394]
Length = 259
Score = 202 bits (515), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/232 (43%), Positives = 142/232 (61%), Gaps = 6/232 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA R +PR GH+KG++V + G++ LT+FAFS NWRR
Sbjct: 25 PHHVAVIMDGNGRWAKKRFMPRVMGHKKGLDVLENMCRVCDRAGVRFLTVFAFSTENWRR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L L+K + +NN+++RVIG+R + + + EAE TR NTGL
Sbjct: 85 PEDEVSFLMNLFLMALQKRVVKMHQNNMRLRVIGDRSRFSEAMRRSIDEAEAMTRGNTGL 144
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA +Y R +I +A + I G H +S L K + +DVP+PDL IRTGG
Sbjct: 145 TLTIAADYGGRWDILQAANAL---IAEG--VQHITESDLSGKLM-LADVPEPDLFIRTGG 198
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+F+LWQ+AY+EF F WPDF E AL+ + R+RRFG S++
Sbjct: 199 ETRISNFMLWQMAYAEFYFTDTLWPDFDEEHIHRALSSFAQRERRFGRTSEQ 250
>gi|29376987|ref|NP_816141.1| undecaprenyl diphosphate synthase [Enterococcus faecalis V583]
gi|227519783|ref|ZP_03949832.1| Di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0104]
gi|227554031|ref|ZP_03984078.1| Di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
HH22]
gi|229545096|ref|ZP_04433821.1| Di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX1322]
gi|256616951|ref|ZP_05473797.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis ATCC
4200]
gi|256763177|ref|ZP_05503757.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis T3]
gi|256853850|ref|ZP_05559215.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis T8]
gi|256961224|ref|ZP_05565395.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis
Merz96]
gi|257081938|ref|ZP_05576299.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis E1Sol]
gi|257419945|ref|ZP_05596939.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis T11]
gi|293384174|ref|ZP_06630067.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
R712]
gi|293386986|ref|ZP_06631555.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
S613]
gi|307276783|ref|ZP_07557895.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX2134]
gi|307290453|ref|ZP_07570367.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0411]
gi|312907877|ref|ZP_07766860.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
DAPTO 512]
gi|312978594|ref|ZP_07790332.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
DAPTO 516]
gi|42559797|sp|Q831K9|UPPS_ENTFA RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|29344452|gb|AAO82211.1| undecaprenyl diphosphate synthase [Enterococcus faecalis V583]
gi|227072763|gb|EEI10726.1| Di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0104]
gi|227176855|gb|EEI57827.1| Di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
HH22]
gi|229309789|gb|EEN75776.1| Di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX1322]
gi|256596478|gb|EEU15654.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis ATCC
4200]
gi|256684428|gb|EEU24123.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis T3]
gi|256710793|gb|EEU25836.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis T8]
gi|256951720|gb|EEU68352.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis
Merz96]
gi|256989968|gb|EEU77270.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis E1Sol]
gi|257161773|gb|EEU91733.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis T11]
gi|291078489|gb|EFE15853.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
R712]
gi|291083656|gb|EFE20619.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
S613]
gi|295113527|emb|CBL32164.1| Undecaprenyl pyrophosphate synthetase [Enterococcus sp. 7L76]
gi|306498486|gb|EFM67989.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0411]
gi|306506560|gb|EFM75718.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX2134]
gi|310625968|gb|EFQ09251.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
DAPTO 512]
gi|311288743|gb|EFQ67299.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
DAPTO 516]
gi|315030251|gb|EFT42183.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX4000]
gi|315161754|gb|EFU05771.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0645]
gi|315166527|gb|EFU10544.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX1341]
gi|315170211|gb|EFU14228.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX1342]
gi|315574690|gb|EFU86881.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0309B]
gi|315580935|gb|EFU93126.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0309A]
Length = 271
Score = 202 bits (515), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/235 (42%), Positives = 144/235 (61%), Gaps = 4/235 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH++G++ +I A+ +G+K LT++AFS NW+R
Sbjct: 27 PQHIAIIMDGNGRWAQNRRLPRIAGHKEGMDTVKKITKHASHLGVKVLTLYAFSTENWKR 86
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L++L F L K N+KV V+G + L +K A +QT+ NTG+
Sbjct: 87 PTDEVNFLMQLPVDFFDTFVPELIKENVKVNVMGYQEFLPSHTQDAVKRAIEQTKDNTGM 146
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY +R E+ A+K I ++ + + ++ IA +L T +P DP+L+I
Sbjct: 147 VLNFALNYGARAELLTAMKQIAAEVSEKAYTADEITEETIADHLMTGFLPTELRDPELLI 206
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
RT GE+R+S+FLLWQ+AYSE F WPDFS + A+ + R+RRFGGL +
Sbjct: 207 RTSGEERISNFLLWQIAYSELFFTKALWPDFSGDTLETAIASFQNRNRRFGGLKE 261
>gi|315607042|ref|ZP_07882046.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella buccae ATCC
33574]
gi|315251096|gb|EFU31081.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella buccae ATCC
33574]
Length = 253
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 99/240 (41%), Positives = 142/240 (59%), Gaps = 10/240 (4%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA RG PR GH+ G+E I + +G+K LT++ FS NW R
Sbjct: 10 PEHIAIIMDGNGRWATERGKPRSYGHQAGVEAVRRITSECTRLGVKWLTLYTFSTENWSR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L+ S L+ + K+N++ RVIG+ L D+ L+ + T N +
Sbjct: 70 PADEVSALMGLVLSSLEDEIF--MKHNVRFRVIGDVGRLPQDVWQKLQMTMEHTARNNAM 127
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDI----ESGSVCSHDVD----SSLIAKYLDTSDVPDP 182
+ +A +YSSR EI++A++ I + G + + +D I ++LDT +PDP
Sbjct: 128 TMVVALSYSSRWEITKALREIVGEALGQAGEGRLSAAGIDDFVTEECIGRHLDTCFMPDP 187
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL+IRTGGE R+S++LLWQ+AYSE F YWPDF E A+ Y R RRFG ++
Sbjct: 188 DLLIRTGGELRISNYLLWQIAYSELYFCDTYWPDFGEEELHEAIADYQCRQRRFGKTEEQ 247
>gi|295088111|emb|CBK69634.1| Undecaprenyl pyrophosphate synthetase [Bacteroides xylanisolvens
XB1A]
Length = 225
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 97/225 (43%), Positives = 142/225 (63%), Gaps = 2/225 (0%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA RG R GHR G E I AA +GIK LT++ FS NW RP+ EI+
Sbjct: 1 MDGNGRWAKQRGEERTYGHRAGAETVQNITEDAARLGIKYLTLYTFSTENWNRPLDEIAA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ L+ +++ +L KNNI+ VIG+ L ++ L ++T N+G+ + +A +
Sbjct: 61 LMNLLLESIEEE--TLMKNNIRFNVIGDFKKLPVEVQKSLTSCIERTSKNSGMYMVLALS 118
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
YSSR EI+ A++ I +++G + + I+ +LDT+ +PDPDL+IRTGGE RLS++
Sbjct: 119 YSSRWEITEAVRQIATQVKTGEISPEQITDECISSHLDTNFMPDPDLLIRTGGEIRLSNY 178
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
LLWQ AYSE F +WPDF +E + A+ +Y R+RRFG S++
Sbjct: 179 LLWQCAYSELYFCDTFWPDFDKEELYKAIWEYQQRERRFGKTSEQ 223
>gi|332307501|ref|YP_004435352.1| undecaprenyl diphosphate synthase [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332174830|gb|AEE24084.1| undecaprenyl diphosphate synthase [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 246
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 101/227 (44%), Positives = 142/227 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R GHR G++ V+ + + IK LT+FAFS NW R
Sbjct: 13 PQHVAIIMDGNGRWAKKKGKIRTFGHRAGVKGVRASVSFSLKNKIKVLTLFAFSSENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L K L L KNN+K+RVIG+ D ++ +K+AE T N GL
Sbjct: 73 PQEEVGVLMELFKMVLSSEVKKLHKNNVKLRVIGDTSRFDKKLVEQIKDAETLTANNDGL 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I A K + + ++ GS+ S +D +++ +Y SD+P+ DL+IRTGG
Sbjct: 133 ILNIAANYGGRWDILNATKALAEQVKEGSLESEQIDEAMLNRYTCCSDLPELDLLIRTGG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+FLLWQVAY+E F YWPDF+ + F A++ + R RR+G
Sbjct: 193 ETRISNFLLWQVAYAELYFTDTYWPDFNEDAFQLAIDNFADRQRRYG 239
>gi|323142323|ref|ZP_08077155.1| di-trans,poly-cis-decaprenylcistransferase [Phascolarctobacterium
sp. YIT 12067]
gi|322413207|gb|EFY04094.1| di-trans,poly-cis-decaprenylcistransferase [Phascolarctobacterium
sp. YIT 12067]
Length = 262
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 94/229 (41%), Positives = 148/229 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA A+G R GH+ G E IV AA ++G+K ++ +AFS NW+R
Sbjct: 31 PQHIAIIMDGNGRWAKAQGKVRTFGHQAGAETLKTIVRAADKLGVKVISAYAFSTENWKR 90
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
PV+E++ +++L+ +L +NN++VR IG+R L + + ++ A + T+ NTG+
Sbjct: 91 PVTEVNFIMELLSRYLTNEIDEFNENNVQVRFIGSRKGLPEIVQQKMEHAIEATKNNTGI 150
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY + EI A++ I + +G++ D+D+++I +L T +P PDL+IR GG
Sbjct: 151 ILNLAINYGGQAEILHAVRTIAAEAANGTLAVDDIDNNVIENHLYTKGLPAPDLLIRPGG 210
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+ R+S+FLLWQ+AY+E +WP+F+ + A+ Y R+RRFGGL
Sbjct: 211 DLRISNFLLWQIAYAEIWTTKVFWPEFTPDHLVEAILAYQGRERRFGGL 259
>gi|261400101|ref|ZP_05986226.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria lactamica
ATCC 23970]
gi|313667489|ref|YP_004047773.1| undecaprenyl diphosphate synthase [Neisseria lactamica ST-640]
gi|269210328|gb|EEZ76783.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria lactamica
ATCC 23970]
gi|313004951|emb|CBN86378.1| putative undecaprenyl diphosphate synthase [Neisseria lactamica
020-06]
Length = 248
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 101/240 (42%), Positives = 147/240 (61%), Gaps = 6/240 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + ++ P HI +IMDGNGRWA R LPR GH++G++ +V A +G++ LT+FA
Sbjct: 7 AVLEHTAIPRHIAVIMDGNGRWAKKRFLPRIMGHKRGLDALENMVKHCAGLGVRYLTVFA 66
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP E+S L+ L L+K L +NN++++++G+R + IL ++EAE
Sbjct: 67 FSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNMRLKILGSRERFNRQILQGIEEAEA 126
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTGL L IA +Y R +I +A + D S ++ ++AKYL D P+P
Sbjct: 127 LTANNTGLTLSIAADYGGRWDILQAANRLLADGVS------EITEDMLAKYLMLGDAPEP 180
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL IRTGGE R+S+FLLWQ+AY+E F WPDF A++ + R+RRFG S++
Sbjct: 181 DLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDETALDAAVSSFQKRERRFGRTSEQ 240
>gi|226940989|ref|YP_002796063.1| UppS [Laribacter hongkongensis HLHK9]
gi|226715916|gb|ACO75054.1| UppS [Laribacter hongkongensis HLHK9]
Length = 252
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 143/232 (61%), Gaps = 2/232 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH++G+E E V E+G++ LT+FAFS NWRR
Sbjct: 15 PRHIAIIMDGNGRWAKKRFLPRVAGHKRGLETVRETVRTCTELGVEYLTLFAFSSENWRR 74
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L L++ L NI+++++G+ ++ ++ A+ +T NTGL
Sbjct: 75 PDEEVSFLMGLFMQALEREVDRLHGRNIRLKIVGHLARFSGELQDRIEAAQLKTAGNTGL 134
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L I +Y R +I +AI+ Q G+ V + +A YL + P+PDL IRTGG
Sbjct: 135 TLTICADYGGRWDILQAIEQWRQ--AGGAASPEPVTEADLAPYLSLAYAPEPDLFIRTGG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FLLWQ+AY+E F WPDF R F A++ Y+ R+RRFG S++
Sbjct: 193 EQRVSNFLLWQLAYTELYFTDALWPDFDRTAFMTAIDSYHRRERRFGRTSEQ 244
>gi|167586859|ref|ZP_02379247.1| undecaprenyl diphosphate synthase [Burkholderia ubonensis Bu]
Length = 260
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 102/234 (43%), Positives = 144/234 (61%), Gaps = 5/234 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH +G++ +V A VG++ LT+FAFS NWRR
Sbjct: 17 PRHIAIIMDGNGRWATERRLPRVAGHTRGVDAVRAVVEGCARVGVEYLTLFAFSSENWRR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L + L++ L N I++RV+G+ + I +++ AE +T NT L
Sbjct: 77 PTDEVSFLMRLFITALEREVGKLHANGIRLRVVGDLDRFEPRIQALIRRAETKTARNTRL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSS--LIAKYLDTSDVPDPDLIIRT 188
L IA NY R +I +A + + +E + +V+ S A +L + P+PDL IRT
Sbjct: 137 TLTIAANYGGRWDILQATRKL---VEQAAREGREVEVSEDSFAPHLAMAYAPEPDLFIRT 193
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GGE+R+S+FLLWQ+AY+EF F ++WPDF AL Y R+RRFG S +
Sbjct: 194 GGEQRISNFLLWQLAYTEFYFTDKFWPDFDGAALTDALASYTDRERRFGRTSAQ 247
>gi|167032163|ref|YP_001667394.1| undecaprenyl diphosphate synthase [Pseudomonas putida GB-1]
gi|166858651|gb|ABY97058.1| undecaprenyl diphosphate synthase [Pseudomonas putida GB-1]
Length = 251
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 97/237 (40%), Positives = 146/237 (61%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ SS P H+ IIMDGN RWA R LP AGH+ G++ ++ A+ G++ LT+FAFS
Sbjct: 8 VPSSVPRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAKSGVEVLTLFAFSS 67
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP E+ L++L S L++ L +NNI +R+IG+R ++ ++EAE T
Sbjct: 68 ENWQRPAEEVGALMELFFSALRREAKRLNENNISLRIIGDRSRFHPELQAAMREAEAVTA 127
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N L IA NY + +I++A + + +++++G + D+ L+ L T ++P PDL
Sbjct: 128 GNNRFILQIAANYGGQWDIAQAAQRLAREVQAGHLRPEDITPGLLQACLATGELPLPDLC 187
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTGGE R+S+FLLWQ+AY+E F YWPDF E +AL + R RRFG S++
Sbjct: 188 IRTGGEHRISNFLLWQLAYAELYFSDLYWPDFKHEAMRNALADFASRQRRFGKTSEQ 244
>gi|90413533|ref|ZP_01221524.1| putative undecaprenyl diphosphate synthase [Photobacterium
profundum 3TCK]
gi|90325465|gb|EAS41948.1| putative undecaprenyl diphosphate synthase [Photobacterium
profundum 3TCK]
Length = 254
Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 96/227 (42%), Positives = 143/227 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA A+G R GH+ G+E + V+ A +G+K LT+FAFS NWRR
Sbjct: 16 PKHVAVIMDGNGRWAKAKGKARVFGHKAGVEAVRKSVSTANRLGVKVLTLFAFSSENWRR 75
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L + L + L KNNI++R+IG++ + + + +E T NTGL
Sbjct: 76 PEDEVSLLMELFMTVLTREVKRLHKNNIQLRIIGDKSGFSERLQRKIATSEALTANNTGL 135
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY + +I +A K + I + + D+ +++ + T+D+PD DL+IRT G
Sbjct: 136 VLNIAANYGGQWDILQATKKLAVQIAEQGLTASDITEDMLSAGMSTADLPDVDLMIRTSG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+F+LWQ AY+E F ++WPDF E F +A+ Y R+RRFG
Sbjct: 196 ECRISNFMLWQAAYAELYFTEQHWPDFDEESFANAIAWYINRERRFG 242
>gi|291614110|ref|YP_003524267.1| undecaprenyl diphosphate synthase [Sideroxydans lithotrophicus
ES-1]
gi|291584222|gb|ADE11880.1| undecaprenyl diphosphate synthase [Sideroxydans lithotrophicus
ES-1]
Length = 255
Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 99/235 (42%), Positives = 144/235 (61%), Gaps = 3/235 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
++ P HI IIMDGNGRWA R +PR GH++G+E E+V A ++G++ LT+FAFS N
Sbjct: 16 TAVPRHIAIIMDGNGRWAKQRFMPRVMGHQRGVETVREMVKACRQLGVEYLTLFAFSSEN 75
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+S L++L L++ L +NNI+++VIG+R + ++ ++EAE T N
Sbjct: 76 WRRPADEVSFLMQLFMKMLEREVGKLHENNIRLKVIGDRSRFEAQLVRHIEEAELLTANN 135
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T L L IA NY R +I +A+ + Q + + + + YL P+PDL IR
Sbjct: 136 TSLTLTIAANYGGRWDIMQAMHALSQAHPERATAFGEEE---LTPYLSMPYAPEPDLFIR 192
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE+R+S+FLLWQ+AY+E F WP F R A+ Y R+RRFG S++
Sbjct: 193 TGGEQRISNFLLWQLAYTELYFTDTLWPAFDRAALESAIQSYQKRERRFGRTSEQ 247
>gi|160871999|ref|ZP_02062131.1| di-trans,poly-cis-decaprenylcistransferase [Rickettsiella grylli]
gi|159120798|gb|EDP46136.1| di-trans,poly-cis-decaprenylcistransferase [Rickettsiella grylli]
Length = 252
Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 146/232 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR GH++G++ +++ + +E+GIK LT+FAFS NW+R
Sbjct: 13 PQHIAIIMDGNGRWAKQRHLPRMLGHQEGVKAVRKVIKSCSEMGIKALTLFAFSSENWQR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L + LK L +NN++++++GN + + + +++ T NTGL
Sbjct: 73 PEQEVNYLMTLFLNTLKNEIEKLAQNNVQLKMVGNLERFNAPLRQWIDKSQALTAHNTGL 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NYS + +I +A + + +++ G+ + + + A YL + +P DL+IRT G
Sbjct: 133 QLIIAVNYSGQWDIVQAAQKLIDEVKHGAFIADQLTQEMFANYLSLAHLPALDLLIRTSG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AY+E F WPDF + AL+ Y R+RRFG S++
Sbjct: 193 EYRISNFLLWQLAYTELYFTDTLWPDFDEQALQKALHFYAQRERRFGCTSEQ 244
>gi|33861648|ref|NP_893209.1| undecaprenyl pyrophosphate synthetase [Prochlorococcus marinus
subsp. pastoris str. CCMP1986]
gi|42559765|sp|Q7V102|UPPS_PROMP RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|33634225|emb|CAE19551.1| Undecaprenyl pyrophosphate synthetase (UPPS) [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
Length = 272
Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 135/229 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA +GLPR GH KG+ V EI+ A+ + K LT++AFS NW R
Sbjct: 24 PEHIAIIMDGNGRWATKKGLPRSFGHNKGVSVLKEIIKASKNIDCKVLTVYAFSTENWIR 83
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L+ L + LKK + + +IK++ IG+ L + + ++K +E T N
Sbjct: 84 PSNEVDFLINLFEKVLKKEISEIHQESIKIKFIGDLSPLPNSLKLLIKSSEALTNNNKKF 143
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L I NY R EI +A K I SG + D+D L L T DP+L+IRT G
Sbjct: 144 TLNICVNYGGRQEIVKAAKEIAIKSSSGKIKPSDIDEQLFNSELLTKGSMDPELLIRTSG 203
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
EKR+S+FLLWQ+AYSE WPDF+ F A+ Y R+RRFGG+
Sbjct: 204 EKRISNFLLWQLAYSEIYVTDVLWPDFTESEFLKAIIDYQSRNRRFGGI 252
>gi|160902093|ref|YP_001567674.1| undecaprenyl diphosphate synthase [Petrotoga mobilis SJ95]
gi|160359737|gb|ABX31351.1| undecaprenyl diphosphate synthase [Petrotoga mobilis SJ95]
Length = 245
Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 106/239 (44%), Positives = 146/239 (61%), Gaps = 6/239 (2%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
SM S P H+GIIMDGNGRWA G R GH++G E +++ + E GI LT++ F
Sbjct: 5 SMKLSKVPAHVGIIMDGNGRWATKSGYDRNYGHQRGAETALKVIEWSKEFGINYLTLYTF 64
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP +EI L L+ + + + +N + VR +G L + ++ KE ED
Sbjct: 65 SEENWKRPQNEIEFLFDLLIRYFEDNLKRIIENGVNVRFLGRINKLPESLIKTCKEIEDI 124
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
++ N NL A NYS R EI A+ I ++ ++ ++ D+DS+L YL DVP PD
Sbjct: 125 SKNNKDFNLIFALNYSGRQEIVDAVNKILKEKKT-TITKEDIDSNL---YL--PDVPYPD 178
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
LIIRT GE+RLS+FLLWQ AYSE F WPDFS + +F+AL Y+ R+RRFGG+S K
Sbjct: 179 LIIRTAGEERLSNFLLWQSAYSELYFTETLWPDFSYDDYFNALLDYSKRERRFGGISSK 237
>gi|213961711|ref|ZP_03389977.1| di-trans,poly-cis-decaprenylcistransferase [Capnocytophaga
sputigena Capno]
gi|213955500|gb|EEB66816.1| di-trans,poly-cis-decaprenylcistransferase [Capnocytophaga
sputigena Capno]
Length = 240
Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 98/238 (41%), Positives = 143/238 (60%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M + P H+ IIMDGNGRWA +GL R GH KG++ ++V E I LT++AFS
Sbjct: 1 MEITKYPKHLAIIMDGNGRWAKKQGLLRAFGHEKGVQTVRQVVEYCVEHKIPYLTLYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP E+ L++L+ FLKK SL KNN+K+ IGN L D+
Sbjct: 61 TENWNRPALEVKALMELLVKFLKKEVDSLLKNNVKLNTIGNLDRFPPKARETLLATIDKL 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NTG+ L +A +Y SR+E+ A+K I ++ G + + + + ++L T+++PD DL
Sbjct: 121 KHNTGVTLTLALSYGSREELLTAVKQIATKVKDGELTADAITEQTLQQHLYTNNLPDVDL 180
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IRT GE R+S+FLLWQ+AY+E F WPDF+++ AL Y R+RRFG S++
Sbjct: 181 LIRTSGEYRISNFLLWQIAYAELYFAEVLWPDFTKKHLEDALLNYQNRERRFGKTSEQ 238
>gi|254829928|ref|ZP_05234583.1| hypothetical protein Lmon1_01165 [Listeria monocytogenes 10403S]
Length = 252
Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 101/229 (44%), Positives = 139/229 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R LPR AGH++G++V + A + I LT++AFS NW+R
Sbjct: 24 PRHVAIIMDGNGRWAKKRFLPRIAGHKEGMDVVKRVTRYANAISIDVLTLYAFSTENWKR 83
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL F L + N++V V+G R +L D + +++A T TGL
Sbjct: 84 PTDEVDFLMKLPVEFFDSFVPELIEENVRVNVMGYRENLPDHTMRAVEKAIADTAHCTGL 143
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY R EI A K +++E + D+ + +L +S + DPDL+IRT G
Sbjct: 144 TLNFALNYGGRSEIITAAKEAMKELELEGKSADDLTEEKLNDHLMSSGLGDPDLLIRTSG 203
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+F+LWQ+AYSEF F +WPDFS+E F A+ +Y R RRFGGL
Sbjct: 204 ELRLSNFMLWQLAYSEFYFTDTHWPDFSKEDFLQAIIEYQNRSRRFGGL 252
>gi|288819093|ref|YP_003433441.1| undecaprenyl pyrophosphate synthetase [Hydrogenobacter thermophilus
TK-6]
gi|288788493|dbj|BAI70240.1| undecaprenyl pyrophosphate synthetase [Hydrogenobacter thermophilus
TK-6]
gi|308752676|gb|ADO46159.1| undecaprenyl diphosphate synthase [Hydrogenobacter thermophilus
TK-6]
Length = 230
Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 95/235 (40%), Positives = 143/235 (60%), Gaps = 6/235 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M S P H+ +IMDGNGRWA RGL R GH +G++ E+V A E+GIK LT+F FS
Sbjct: 1 MTSLKIPTHLAVIMDGNGRWAKERGLSRIHGHYQGVKRAEELVDACIELGIKYLTLFTFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+ L L +S+LK+ L NI+++ IG R L +++ ++++ E+ +
Sbjct: 61 TENWKRPEEEVKALFMLFESYLKEKKDELISRNIRLKFIGRRDRLPKELVMLMEQVEEDS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ +G+ + +A +Y R++I RAI + + VD + + +LD +PDPDL
Sbjct: 121 KRCSGITVCMALDYGGRNDIVRAINKVLK------AGLKSVDETTFSSFLDLDGIPDPDL 174
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GEKR+S+FLLW +AYSE F YWPDF + A+ Y+ R R+FG +
Sbjct: 175 LIRTAGEKRISNFLLWNLAYSELYFTDTYWPDFDKTELLKAIENYSRRVRKFGAV 229
>gi|170727616|ref|YP_001761642.1| undecaprenyl diphosphate synthase [Shewanella woodyi ATCC 51908]
gi|169812963|gb|ACA87547.1| undecaprenyl diphosphate synthase [Shewanella woodyi ATCC 51908]
Length = 264
Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 94/236 (39%), Positives = 147/236 (62%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+A ++ S P H+ IIMDGNGRWA A+G PR GH+ G++ V+ A E+GI +LT+F
Sbjct: 16 LAELVKLSIPKHVAIIMDGNGRWAQAQGKPRVMGHKAGVKTVRRAVSTAREMGIDSLTLF 75
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP E++ L++L + L++ L KN +++ +IG+ + + + AE
Sbjct: 76 AFSSENWRRPDKEVTLLMELFFTVLQREIKLLHKNGVRLNIIGDISRFSERLQKQIAAAE 135
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T NTG+ L +A NY R +I +A K + + ++SG + S+ ++++L + P+
Sbjct: 136 EKTAENTGMVLNVAANYGGRWDIMQAAKTLAEKVQSGEMNSNQFTEEALSQHLSMQNQPE 195
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRTGG+ R+S+F+LWQ AY+E VF WPDF F A+ + R RRFG
Sbjct: 196 VDLMIRTGGDYRISNFVLWQAAYAELVFTDTLWPDFDEHAFKQAVATFASRQRRFG 251
>gi|241760632|ref|ZP_04758724.1| undecaprenyl pyrophosphate synthetase 1 [Neisseria flavescens
SK114]
gi|241318813|gb|EER55339.1| undecaprenyl pyrophosphate synthetase 1 [Neisseria flavescens
SK114]
Length = 248
Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 101/235 (42%), Positives = 145/235 (61%), Gaps = 6/235 (2%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S+ P HI +IMDGNGRWA R LPR GH++G++ +V AE+G++ LT+FAFS N
Sbjct: 12 SAIPRHIAVIMDGNGRWAKKRFLPRVMGHKRGLDALENMVKHCAELGVQYLTVFAFSTEN 71
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+S L+ L L+K L NN+++R+IG+R + +IL ++ AE T N
Sbjct: 72 WRRPEEEVSFLMGLFLQALQKQVRRLHDNNMRLRIIGSRERFNAEILKGIEAAEALTANN 131
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
TGL L IA +Y R +I +A + I G ++ +++YL D P+PDL IR
Sbjct: 132 TGLTLSIAADYGGRWDILQAANQL---IAEGVT---EITEEALSRYLMLGDAPEPDLFIR 185
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE R+S+FLLWQ+AY+E F WPDF+ + A+ + R+RRFG S++
Sbjct: 186 TGGETRISNFLLWQMAYAELYFTDTLWPDFNEKSLNEAIASFQKRERRFGRTSEQ 240
>gi|94500626|ref|ZP_01307156.1| undecaprenyl diphosphate synthase [Oceanobacter sp. RED65]
gi|94427181|gb|EAT12161.1| undecaprenyl diphosphate synthase [Oceanobacter sp. RED65]
Length = 252
Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 141/227 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I+MDGN RWA R LP AGH+ G++ ++ +A +G++ LT+FAFS NW+R
Sbjct: 13 PQHVAIVMDGNNRWAKRRHLPGVAGHKAGVKAVKTVIEQSARLGVEALTLFAFSSENWQR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L++L + L+K L +++I++ +IG+ D + + EAE T N GL
Sbjct: 73 PEKEVNALMQLFLNALQKEVSKLHEHDIRLIIIGDTSRFSDTLQKHITEAEALTANNQGL 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +++ A I ++ G + +++ L +Y SD+P PDL IRTGG
Sbjct: 133 KLVIAANYGGRWDMANAAYKIACKVKQGELSENEITPELFHQYTSLSDLPSPDLCIRTGG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E RLS+F+LWQ AY+E VF WPDF+ + F+ A+ +YN R RRFG
Sbjct: 193 EVRLSNFMLWQFAYTELVFSDALWPDFNEQDFWSAITEYNSRTRRFG 239
>gi|153873178|ref|ZP_02001844.1| Undecaprenyl pyrophosphate synthetase [Beggiatoa sp. PS]
gi|152070357|gb|EDN68157.1| Undecaprenyl pyrophosphate synthetase [Beggiatoa sp. PS]
Length = 231
Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 92/220 (41%), Positives = 142/220 (64%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA R LPR AGH+ G+E +V AE I+ LT+FAFS NW+RP E++
Sbjct: 1 MDGNGRWAKKRLLPRHAGHQAGVETVRRVVGFCAEQRIEVLTLFAFSSENWQRPKQEVTL 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L L+K +L +N++++RV+G++ + + + + +AE+ T+ N GL L +A N
Sbjct: 61 LMELFLKALQKEITNLHENHVRLRVVGDKTAFPEKLQQQMVKAEELTKRNAGLTLVVAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R ++ A+K++ +E G + S +++ + L +D+P+PDL IRT GEKR+S+F
Sbjct: 121 YGGRWDMVEAVKSLALQVEQGRLTSQEINEEYFGRQLCLADLPEPDLFIRTSGEKRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
LLWQ+AY+E F WPDF+++ F AL + R RRFG
Sbjct: 181 LLWQLAYAEMFFTDTLWPDFNKDTFMQALEFFASRQRRFG 220
>gi|288926940|ref|ZP_06420838.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella buccae D17]
gi|288336299|gb|EFC74682.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella buccae D17]
Length = 253
Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 99/240 (41%), Positives = 142/240 (59%), Gaps = 10/240 (4%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA RG PR GH+ G+E I + +G+K LT++ FS NW R
Sbjct: 10 PEHIAIIMDGNGRWATERGKPRSYGHQAGVEAVRRITSECTRLGVKWLTLYTFSTENWSR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L+ S L+ + K+N++ RVIG+ L D+ L+ + T N +
Sbjct: 70 PADEVSALMGLVLSSLEDEIF--MKHNVRFRVIGDVGRLPQDVWQKLQMTMEHTARNDAM 127
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDI----ESGSVCSHDVD----SSLIAKYLDTSDVPDP 182
+ +A +YSSR EI++A++ I + G + + +D I ++LDT +PDP
Sbjct: 128 TMVVALSYSSRWEITKALREIVGEALGQAGEGRLSAAGIDDFVTEECIGRHLDTCFMPDP 187
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL+IRTGGE R+S++LLWQ+AYSE F YWPDF E A+ Y R RRFG ++
Sbjct: 188 DLLIRTGGELRISNYLLWQIAYSELYFCDTYWPDFGEEELHEAIADYQCRQRRFGKTEEQ 247
>gi|54310080|ref|YP_131100.1| putative undecaprenyl diphosphate synthase [Photobacterium
profundum SS9]
gi|73920270|sp|Q6LN28|UPPS_PHOPR RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|46914519|emb|CAG21298.1| putative undecaprenyl diphosphate synthase [Photobacterium
profundum SS9]
Length = 254
Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 96/227 (42%), Positives = 142/227 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA A+G R GH+ G+E + V A +G+K LT+FAFS NWRR
Sbjct: 16 PKHVAVIMDGNGRWAKAKGKARVFGHKAGVEAVRKSVTTANRLGVKVLTLFAFSSENWRR 75
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L + L + L KNNI++R+IG++ + + + +E T NTGL
Sbjct: 76 PEDEVSLLMELFMTVLTREVKRLHKNNIQLRIIGDKSGFSERLQRKIATSEALTANNTGL 135
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY + +I +A K + I + + D+ +++ + T+D+PD DL+IRT G
Sbjct: 136 VLNIAANYGGQWDILQATKKLAVQIAEQGLTASDITEDMLSAGMSTADLPDVDLMIRTSG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+F+LWQ AY+E F ++WPDF E F +A+ Y R+RRFG
Sbjct: 196 ECRISNFMLWQAAYAELYFTEQHWPDFDEESFANAIAWYINRERRFG 242
>gi|218437839|ref|YP_002376168.1| undecaprenyl pyrophosphate synthase [Cyanothece sp. PCC 7424]
gi|218170567|gb|ACK69300.1| undecaprenyl diphosphate synthase [Cyanothece sp. PCC 7424]
Length = 249
Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 88/227 (38%), Positives = 138/227 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA RGLPR GH++G++ +++ + G+ LT +AFS NW R
Sbjct: 21 PQHVAVIMDGNGRWAKRRGLPRILGHQRGVDTLKDLLRCCRDWGVPALTAYAFSTENWGR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P+ E+ L+ L + L++ + + N+++R +GN +L + + + ++T+ NTG+
Sbjct: 81 PLEEVEFLMTLFERVLRRELKEMMEENVRIRFLGNLEALPSSLQDEIARSMNETKENTGI 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY R EI +A + I ++ G + D+D L +L T ++P PDL+IRT G
Sbjct: 141 QFSVATNYGGRQEIVQACRAIATQVQEGKLNPEDIDEELFGHHLYTHEIPYPDLLIRTSG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+FLLWQ+AY+E WPDF R+ F AL + R+RRFG
Sbjct: 201 EMRISNFLLWQLAYAEIYVTQTLWPDFDRKEFHQALLNFQQRERRFG 247
>gi|240949516|ref|ZP_04753856.1| undecaprenyl pyrophosphate synthetase [Actinobacillus minor NM305]
gi|240296089|gb|EER46750.1| undecaprenyl pyrophosphate synthetase [Actinobacillus minor NM305]
Length = 237
Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 98/228 (42%), Positives = 141/228 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R GH+ G++ V+ AA+ GIK LT++AFS NW R
Sbjct: 9 PKHVAIIMDGNGRWAKQQGKLRIFGHQNGVKAVRSAVSFAAKYGIKVLTLYAFSSENWSR 68
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+S L+ L L L KNNI++++IG++ + + + EAE T NTGL
Sbjct: 69 PEAEVSALMTLFMKALDSEVKKLHKNNIRLKIIGDKSGFSEVLQKRIAEAEQLTATNTGL 128
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY S +I++A + + ++ G + D+ +L L T + P DL+IRT G
Sbjct: 129 ILNIAANYGSYWDITQAAQKMAVKVKLGEISVSDITPTLFQNELVTEEQPQVDLLIRTSG 188
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R+S+FLLWQ+AY+E F P WPDF+ ++F A+ Y R+RRFGG
Sbjct: 189 EQRISNFLLWQIAYAELFFTPVLWPDFNDQVFSEAIMAYQQRERRFGG 236
>gi|170076733|ref|YP_001733371.1| undecaprenyl diphosphate synthase [Synechococcus sp. PCC 7002]
gi|169884402|gb|ACA98115.1| undecaprenyl diphosphate synthase [Synechococcus sp. PCC 7002]
Length = 245
Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 92/227 (40%), Positives = 135/227 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRW RGLPR GH+KG++ ++ + GI LT++AFS NWRR
Sbjct: 15 PKHIAVIMDGNGRWGQQRGLPRIMGHQKGVDTIRNMLTYCQDWGIHALTVYAFSTENWRR 74
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L+ L + L++ I++R +G+ SL + ++ + QT+ N G+
Sbjct: 75 PPTEVEFLMTLFEKVLRREIKIWAAKGIQIRFVGDLTSLPYSLQAEIQRSVIQTQHNNGI 134
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY R E+ +A + I + +G + D++ +LI +L T +PDPDL+IRT G
Sbjct: 135 QFTVATNYGGRQELVQACRAIATKVAAGELRPSDINETLINDHLYTHGIPDPDLLIRTSG 194
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E RLS+FLLWQ+AYSE P WPDF + AL + R+RRFG
Sbjct: 195 EMRLSNFLLWQMAYSEIYVTPTLWPDFDKTELHRALLAFQQRERRFG 241
>gi|167563184|ref|ZP_02356100.1| undecaprenyl diphosphate synthase [Burkholderia oklahomensis EO147]
Length = 260
Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 97/236 (41%), Positives = 143/236 (60%), Gaps = 1/236 (0%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+++ P HI IIMDGNGRWA R LPR AGH +G++ +V A G++ LT+FAFS
Sbjct: 13 AAAVPRHIAIIMDGNGRWATERRLPRVAGHTRGVDAVRSVVEGCARAGVEYLTLFAFSSE 72
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+S L++L + L++ L N I++RV+G+ + I +++ AE +T
Sbjct: 73 NWRRPNDEVSFLMRLFITALEREVGKLHANGIRLRVVGDLSKFEPRIQALIRRAETKTAR 132
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NT L L IA NY R +I +A + + + + ++D ++L + P+PDL I
Sbjct: 133 NTRLTLTIAANYGGRWDILQATQRLVDEAAREGRAA-EIDEDAFGRHLAMAYAPEPDLFI 191
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE+R+S+FLLWQ+AY+E F ++WPDF AL Y R+RRFG S +
Sbjct: 192 RTGGEQRISNFLLWQLAYTELYFTDKFWPDFDANALAEALASYTHRERRFGRTSAQ 247
>gi|319892275|ref|YP_004149150.1| Undecaprenyl pyrophosphate synthetase [Staphylococcus
pseudintermedius HKU10-03]
gi|317161971|gb|ADV05514.1| Undecaprenyl pyrophosphate synthetase [Staphylococcus
pseudintermedius HKU10-03]
Length = 253
Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 98/232 (42%), Positives = 142/232 (61%), Gaps = 5/232 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R +PR GH +G++ I AA+++G+K LT++AFS NW R
Sbjct: 24 PEHIAIIMDGNGRWAKQRKMPRIKGHYQGMQTIKTITRAASDLGVKYLTLYAFSTENWSR 83
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ ++ L +FL L + N++V +G L + + ++EA+ +T NTGL
Sbjct: 84 PDEEVNYIMGLPVNFLNTFLPELIEKNVRVETVGFIDELPEKTIQAIEEAKIKTADNTGL 143
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDS---SLIAKYLDTSDVPDPDLIIR 187
L A NY R EI I+ + +++ S D+D+ KYL T D PDP+L+IR
Sbjct: 144 TLIFAINYGGRAEIVHGIQTLMKEMRHAS--DQDIDALTEQHFQKYLMTRDYPDPELLIR 201
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
T GE+R+S+FL+WQ++YSEF+F + WPDF E + Y R RRFGGL
Sbjct: 202 TSGEQRVSNFLIWQLSYSEFIFNSKMWPDFDGEELKACIKTYQSRQRRFGGL 253
>gi|104783191|ref|YP_609689.1| undecaprenyl diphosphate synthase [Pseudomonas entomophila L48]
gi|95112178|emb|CAK16905.1| undecaprenyl diphosphate synthase [Pseudomonas entomophila L48]
Length = 251
Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 97/235 (41%), Positives = 145/235 (61%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
SS P H+ IIMDGN RWA R LP AGH+ G++ ++ A+ G++ LT+FAFS N
Sbjct: 10 SSVPRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAQSGVEVLTLFAFSSEN 69
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W+RP E+ L++L S L++ L +NNI +R+IG+R ++ ++EAE T N
Sbjct: 70 WQRPAEEVGALMELFFSALRREAKRLNENNISLRIIGDRSRFHPELQAAMREAEALTAGN 129
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L IA NY + +I++A + + +++++G + D+ L+ L T D+P PDL IR
Sbjct: 130 NRFILQIAANYGGQWDIAQAAQRLAREVQAGHLRPDDITPDLLQACLATGDLPLPDLCIR 189
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE+R+S+FLLWQ+AY+E F +WPDF E AL + R RRFG S++
Sbjct: 190 TGGERRISNFLLWQLAYAELYFSDLFWPDFKHEAMRTALADFASRQRRFGKTSEQ 244
>gi|317132573|ref|YP_004091887.1| undecaprenyl diphosphate synthase [Ethanoligenens harbinense
YUAN-3]
gi|315470552|gb|ADU27156.1| undecaprenyl diphosphate synthase [Ethanoligenens harbinense
YUAN-3]
Length = 245
Score = 202 bits (513), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 95/228 (41%), Positives = 141/228 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI I MDGN RWA +PR AGH G E F I ++G++ LT++AFS NW+R
Sbjct: 17 PVHIAIKMDGNRRWAKQHHVPRQAGHVAGSEAFKTIARYCNKIGVQYLTVYAFSSENWKR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+S L+ L++ L+ + NI+ R IG+R LD ++ ++ E E+ + TGL
Sbjct: 77 SEDEVSGLMSLLRKNLRDVLTIFRDENIRTRFIGDRTRLDAELQALMAETEEVSENRTGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R E+ A + I +D+ +G++ VD++++A +L+T+ PDPDL+I G
Sbjct: 137 RLNIAINYGGRPELVAAARAIAEDVRAGTLAPEAVDANVLASHLETAGQPDPDLVIMPGA 196
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
EKR+S+FLLWQ AY+E+ F WPDF+ ++ A+ +N R RRFGG
Sbjct: 197 EKRISNFLLWQSAYAEYWFSDVLWPDFTPDVLEQAIADFNTRKRRFGG 244
>gi|119477106|ref|ZP_01617342.1| undecaprenyl diphosphate synthase [marine gamma proteobacterium
HTCC2143]
gi|119449469|gb|EAW30707.1| undecaprenyl diphosphate synthase [marine gamma proteobacterium
HTCC2143]
Length = 269
Score = 202 bits (513), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 94/228 (41%), Positives = 140/228 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G GHR G+E ++ A GIK +T+FAFS NW+R
Sbjct: 14 PGHLAIIMDGNGRWAHRQGKSASYGHRAGVEAVRSVLELANGYGIKIVTLFAFSSENWQR 73
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L+ L S+LK+ L + I++R IG+R +L +++AE T N
Sbjct: 74 PGTEVKALMTLFGSYLKREVKQLHADRIRIRFIGDRHRFSAGLLKQMEQAEQLTVNNRER 133
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA +Y + +I+R++K I + ++ G++ ++D +L+ Y+ +D+P PDL IRT G
Sbjct: 134 TLVIAVDYGGQQDIARSVKVIAEQVKLGALQPSEIDETLLDSYISLADLPKPDLCIRTAG 193
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R+S+FLLWQ+AYSE F WPDF AL+ + RDRR+GG
Sbjct: 194 EQRISNFLLWQLAYSELFFTETLWPDFGEHDMIEALSSFESRDRRYGG 241
>gi|183597592|ref|ZP_02959085.1| hypothetical protein PROSTU_00874 [Providencia stuartii ATCC 25827]
gi|188023088|gb|EDU61128.1| hypothetical protein PROSTU_00874 [Providencia stuartii ATCC 25827]
Length = 250
Score = 202 bits (513), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 101/235 (42%), Positives = 147/235 (62%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ S+ P H+ IIMDGNGRWA RG R GH+ G+E V A + I +LT++AF
Sbjct: 7 NLSHSALPKHVAIIMDGNGRWAKQRGKLRITGHKAGVESVRNAVRFAVKNKISSLTLYAF 66
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRRP E+S L++L L +L KNN+K+ VIG+ + + +++AE
Sbjct: 67 SSENWRRPEKEVSSLMELFVFALDNEVKNLHKNNVKLLVIGDISRFSERLQKRIQKAEKL 126
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NTGL L IA NY R +I+ ++K IF ++SG + D++ + I Y+ D + D
Sbjct: 127 TANNTGLKLNIAANYGGRWDIANSMKQIFARVQSGQLSLDDINENTIDHYVCMHDQENVD 186
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L+IRTGGE R+S+FLLWQVAY+EF F WPDF +F +A++ ++ R+RR+GG
Sbjct: 187 LVIRTGGEHRISNFLLWQVAYAEFYFTNVLWPDFDEMVFQNAIDAFSQRERRYGG 241
>gi|67922228|ref|ZP_00515742.1| Di-trans-poly-cis-decaprenylcistransferase [Crocosphaera watsonii
WH 8501]
gi|67855931|gb|EAM51176.1| Di-trans-poly-cis-decaprenylcistransferase [Crocosphaera watsonii
WH 8501]
Length = 283
Score = 202 bits (513), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 91/231 (39%), Positives = 137/231 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA RGLPR GH++G++ +++ ++ GI LT +AFS NW R
Sbjct: 52 PQHIAVIMDGNGRWAKRRGLPRIMGHQRGVDTLKDVLRCCSDWGISALTAYAFSTENWGR 111
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P+ E+ L+ L + L++ + N+++R +G+ L + + + + T NTG+
Sbjct: 112 PLEEVDFLMTLFERVLRRELEEMMTENVRIRFVGDLDVLSPSLQAEISRSMEDTENNTGV 171
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY R EI ++ + I Q ++ G + D++ SL +L T +PDPDL+IRT G
Sbjct: 172 QFTVATNYGGRQEIVQSCRAIAQQVKQGLLNLDDINESLFENFLYTKGIPDPDLLIRTSG 231
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E R+S+FLLWQ+AY+E WPDF R AL Y R+RRFG + K
Sbjct: 232 EMRISNFLLWQLAYAEIYVTQTLWPDFDRHTLHDALLNYQQRERRFGKVGK 282
>gi|261211374|ref|ZP_05925662.1| undecaprenyl pyrophosphate synthetase [Vibrio sp. RC341]
gi|260839329|gb|EEX65955.1| undecaprenyl pyrophosphate synthetase [Vibrio sp. RC341]
Length = 250
Score = 202 bits (513), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 142/227 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA A+G PR GH+ G+ + ++ +A +GI+ +T+FAFS NWRR
Sbjct: 12 PKHIAIIMDGNGRWAKAQGKPRVFGHKNGVAAVRKTISTSARLGIQAITLFAFSSENWRR 71
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L + L L KNN+++RVIG++ + + + +AE T NTG+
Sbjct: 72 PEEEVGVLMELFITVLSTEIKKLHKNNLRLRVIGDKSRFSERLQSKIAQAEQLTASNTGM 131
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ IA NY + +I +A + + + G + D+D ++ ++L +D+PD DL+IRT G
Sbjct: 132 VVNIAANYGGQWDILQATQALAAKVTQGELQPTDIDEAVFKQHLTMADLPDVDLLIRTSG 191
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+F+LWQ+AY+E F P +WP+F A+ + R+RRFG
Sbjct: 192 ECRISNFMLWQLAYAEMYFTPVFWPEFDENCLIEAVTWFVNRERRFG 238
>gi|325278090|ref|ZP_08143607.1| undecaprenyl diphosphate synthase [Pseudomonas sp. TJI-51]
gi|324096777|gb|EGB95106.1| undecaprenyl diphosphate synthase [Pseudomonas sp. TJI-51]
Length = 251
Score = 202 bits (513), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 97/237 (40%), Positives = 145/237 (61%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ SS P H+ IIMDGN RWA R LP AGH+ G++ ++ A+ G++ LT+FAFS
Sbjct: 8 VPSSVPRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAQSGVEVLTLFAFSS 67
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP E+ L++L S L++ L +NNI +R+IG+R ++ ++EAE T
Sbjct: 68 ENWQRPAEEVGALMELFFSALRREAKRLNENNISLRIIGDRSRFHPELQAAMREAEALTA 127
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N L IA NY + +I++A + + +++++G + D+ L+ L T ++P PDL
Sbjct: 128 GNNRFILQIAANYGGQWDIAQAAQRLAREVQAGHLRPDDITPGLLQTCLATGELPLPDLC 187
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTGGE R+S+FLLWQ+AY+E F YWPDF E AL + R RRFG S++
Sbjct: 188 IRTGGEHRISNFLLWQLAYAELYFSDLYWPDFKHEAMRKALADFASRQRRFGKTSEQ 244
>gi|53723735|ref|YP_103191.1| undecaprenyl diphosphate synthase [Burkholderia mallei ATCC 23344]
gi|121598838|ref|YP_993368.1| undecaprenyl diphosphate synthase [Burkholderia mallei SAVP1]
gi|124384785|ref|YP_001029195.1| undecaprenyl diphosphate synthase [Burkholderia mallei NCTC 10229]
gi|126448342|ref|YP_001080875.1| undecaprenyl diphosphate synthase [Burkholderia mallei NCTC 10247]
gi|167000554|ref|ZP_02266365.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia mallei
PRL-20]
gi|238562452|ref|ZP_00440475.2| di-trans,poly-cis-decaprenylcistransferase [Burkholderia mallei GB8
horse 4]
gi|254178729|ref|ZP_04885384.1| undecaprenyl diphosphate synthase [Burkholderia mallei ATCC 10399]
gi|254200143|ref|ZP_04906509.1| undecaprenyl diphosphate synthase [Burkholderia mallei FMH]
gi|254206481|ref|ZP_04912833.1| undecaprenyl diphosphate synthase [Burkholderia mallei JHU]
gi|254358110|ref|ZP_04974383.1| undecaprenyl diphosphate synthase [Burkholderia mallei 2002721280]
gi|52427158|gb|AAU47751.1| undecaprenyl diphosphate synthase [Burkholderia mallei ATCC 23344]
gi|121227648|gb|ABM50166.1| undecaprenyl diphosphate synthase [Burkholderia mallei SAVP1]
gi|124292805|gb|ABN02074.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia mallei
NCTC 10229]
gi|126241212|gb|ABO04305.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia mallei
NCTC 10247]
gi|147749739|gb|EDK56813.1| undecaprenyl diphosphate synthase [Burkholderia mallei FMH]
gi|147753924|gb|EDK60989.1| undecaprenyl diphosphate synthase [Burkholderia mallei JHU]
gi|148027237|gb|EDK85258.1| undecaprenyl diphosphate synthase [Burkholderia mallei 2002721280]
gi|160699768|gb|EDP89738.1| undecaprenyl diphosphate synthase [Burkholderia mallei ATCC 10399]
gi|238522668|gb|EEP86111.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia mallei GB8
horse 4]
gi|243063484|gb|EES45670.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia mallei
PRL-20]
Length = 260
Score = 202 bits (513), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 139/232 (59%), Gaps = 1/232 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH +G++ +V A G++ LT+FAFS NWRR
Sbjct: 17 PRHIAIIMDGNGRWATERRLPRVAGHTRGVDAVRSVVEGCARAGVEYLTLFAFSSENWRR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L + L++ L N I++RV+G+ + I +++ E +T NT L
Sbjct: 77 PNDEVSFLMRLFITALEREVGKLHANGIRLRVVGDLTKFEPRIQALIRRGETKTARNTRL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY +I +A + + ++ ++D A++L + P+PDL IRTGG
Sbjct: 137 TLTIAANYGGHWDILQATRKLVEEAAREGRAP-EIDEDAFARHLAMAYAPEPDLFIRTGG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FLLWQ+AY+EF F +WPDF AL Y R+RRFG S +
Sbjct: 196 EQRISNFLLWQLAYTEFYFTDTFWPDFDAGALAEALASYTHRERRFGRTSAQ 247
>gi|298245132|ref|ZP_06968938.1| undecaprenyl diphosphate synthase [Ktedonobacter racemifer DSM
44963]
gi|297552613|gb|EFH86478.1| undecaprenyl diphosphate synthase [Ktedonobacter racemifer DSM
44963]
Length = 261
Score = 202 bits (513), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 97/236 (41%), Positives = 138/236 (58%), Gaps = 4/236 (1%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
VA+ S SP HI IIMDGNGRWA R LPR AGH+ G+ +V AA+ I+ L+++
Sbjct: 23 VAADQSQSPVRHIAIIMDGNGRWATRRHLPRLAGHKAGVSALRRVVECAADENIEMLSVY 82
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+ L++L ++ L ++ +++R +G L DI ++E+
Sbjct: 83 AFSTENWHRPRIEVDGLMRLFWETIRSDLEKLHRDGVRLRHLGRLYDLAPDIQQAVRESM 142
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
D T+ N + L + FNY R E+ A++ I D S + +I+ YL T D+PD
Sbjct: 143 DLTKDNKRIGLNVCFNYGGRAELVDAVRQIIADGRQPETISEE----MISSYLYTRDLPD 198
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDL+IRT GE R+S+FL+WQ AYSE+ P WPDF RE A+ + R R+FG
Sbjct: 199 PDLVIRTAGEMRVSNFLIWQSAYSEYYATPTLWPDFGREDLLEAVQSFQQRSRKFG 254
>gi|161524434|ref|YP_001579446.1| undecaprenyl diphosphate synthase [Burkholderia multivorans ATCC
17616]
gi|189350811|ref|YP_001946439.1| undecaprenyl pyrophosphate synthetase [Burkholderia multivorans
ATCC 17616]
gi|160341863|gb|ABX14949.1| undecaprenyl diphosphate synthase [Burkholderia multivorans ATCC
17616]
gi|189334833|dbj|BAG43903.1| undecaprenyl pyrophosphate synthetase [Burkholderia multivorans
ATCC 17616]
Length = 260
Score = 202 bits (513), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 140/233 (60%), Gaps = 3/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH +G++ +V A G++ LT+FAFS NWRR
Sbjct: 17 PRHIAIIMDGNGRWATERRLPRVAGHTRGVDAVRAVVEGCARAGVEYLTLFAFSSENWRR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L + L++ L N I++RV+G+ + I +++ AE +T NT L
Sbjct: 77 PSDEVSFLMRLFITALEREIGKLHANGIRLRVVGDLERFEPRIRELIRRAETKTARNTRL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L IA NY R +I +A K + Q G +V A +L + P+PDL IRTG
Sbjct: 137 TLTIAANYGGRWDILQATKKLVEQAAREGREV--EVTEESFAPHLAMAYAPEPDLFIRTG 194
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+R+S+FLLWQ+AY+EF F +YWPDF AL Y R+RRFG S +
Sbjct: 195 GEQRVSNFLLWQLAYAEFYFTNKYWPDFDGAALAEALASYTERERRFGRTSAQ 247
>gi|227529100|ref|ZP_03959149.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus vaginalis
ATCC 49540]
gi|227350944|gb|EEJ41235.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus vaginalis
ATCC 49540]
Length = 261
Score = 202 bits (513), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 145/232 (62%), Gaps = 3/232 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R LPR AGH++G++ + AA+++G+K L+++AFS NW+R
Sbjct: 27 PNHIAIIMDGNGRWAQKRHLPRVAGHKQGMQTVKNVTIAASKLGVKVLSLYAFSTENWKR 86
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE++ L++L F L K+N++V V+G+ L + +A T G+
Sbjct: 87 PSSEVNYLMQLPIKFFSTFVPELVKHNVRVMVMGDITKLPQGTQKAVNDAIADTAECDGM 146
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD---VPDPDLIIR 187
L A NY SRDEI RA + I + + + + +D L+++ + T+D + DPDL+IR
Sbjct: 147 ILNFALNYGSRDEIIRATQQIAKKVAAKEISIDQIDEQLLSQNMMTADLGELADPDLLIR 206
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
T GE+R+S+F+LWQ+AYSE F YWPDF R A+ ++ R RR+GGL
Sbjct: 207 TSGEERISNFMLWQIAYSELEFTDVYWPDFDRHSLEDAIVKFQGRHRRYGGL 258
>gi|223985635|ref|ZP_03635685.1| hypothetical protein HOLDEFILI_02991 [Holdemania filiformis DSM
12042]
gi|223962402|gb|EEF66864.1| hypothetical protein HOLDEFILI_02991 [Holdemania filiformis DSM
12042]
Length = 233
Score = 202 bits (513), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 99/228 (43%), Positives = 139/228 (60%), Gaps = 1/228 (0%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA +G R AGH +G+E I AA ++G++ LT+FAFS NW+RP
Sbjct: 7 HVAIIMDGNGRWAKKQGKVRTAGHYQGVENVRNIAIAANDLGVEVLTVFAFSTENWKRPE 66
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+S L+KL F K+ L + NI++ +IG + + VL+ A D T+ NTG+ L
Sbjct: 67 EEVSYLMKLPSVFFKRFLKELMEKNIRITMIGEMDQIPKETAKVLQAAIDDTKANTGMIL 126
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
A NY R EI A + +D+ G S + +YL + P DL+IRT GE
Sbjct: 127 NFAMNYGGRREIVLAAQAYARDVRDGK-ASDTISDEQFGQYLMGAQFPPLDLLIRTSGEY 185
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
R+S+FLLW++AY+E +F+ E WPDF+ EL L+Q+ RDRRFGG+
Sbjct: 186 RISNFLLWEIAYAEMIFVDEAWPDFTPELLKQCLDQFKQRDRRFGGVK 233
>gi|332532242|ref|ZP_08408123.1| undecaprenyl pyrophosphate synthetase [Pseudoalteromonas
haloplanktis ANT/505]
gi|332038340|gb|EGI74785.1| undecaprenyl pyrophosphate synthetase [Pseudoalteromonas
haloplanktis ANT/505]
Length = 259
Score = 202 bits (513), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 95/227 (41%), Positives = 140/227 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA AR PR GH+KG++ + V ++GI++LT+FAFS NWRR
Sbjct: 20 PKHVAIIMDGNGRWAQARNRPRVYGHKKGVDAVRQSVQFCTKLGIQSLTLFAFSSENWRR 79
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L++L L K L KNN+K+ +IG+ + + + A T NTGL
Sbjct: 80 PEDEVNTLMELFLFVLTKEVKKLHKNNVKLTIIGDLSRFSEGLRSKVDAAHKLTENNTGL 139
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY R +++ A K + + G++ + D+ +A+++ +D +PDL+IRTGG
Sbjct: 140 RLNVAANYGGRWDMANAAKQLALQVAQGTLNAVDITEERLAQHMSMADQAEPDLLIRTGG 199
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+ R+S+FLLWQVAY+E F WPDF+ F A+ Y R+RRFG
Sbjct: 200 DVRISNFLLWQVAYAELYFTETLWPDFNEAAFAEAIACYVARERRFG 246
>gi|189425768|ref|YP_001952945.1| undecaprenyl pyrophosphate synthase [Geobacter lovleyi SZ]
gi|189422027|gb|ACD96425.1| undecaprenyl diphosphate synthase [Geobacter lovleyi SZ]
Length = 246
Score = 202 bits (513), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 143/232 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R L R GH++G E +V A+ +GI LT+FAFS NW R
Sbjct: 10 PRHLAIIMDGNGRWAEQRMLKRIVGHQRGAETVQMVVDQASGLGISYLTLFAFSSENWSR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L+K +++ + KNNI+ VIGNR L ++ +L +A QT NTG+
Sbjct: 70 PKLEVRALMALLKKYIRNELRRMLKNNIRFNVIGNRADLPSEVNEILDDALRQTASNTGM 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y R EI+RA I Q ++ G + + ++ ++YLDT+ +PDPDL+IRT G
Sbjct: 130 VLTLALSYGGRQEIARAAARIAQQVQDGKLQPSQITEAVFSQYLDTAGLPDPDLLIRTSG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AY+E F WPD + AL + R+RRFG S +
Sbjct: 190 EMRISNFLLWQLAYAELYFTDINWPDLTINALHAALADFQARERRFGKTSAQ 241
>gi|294674924|ref|YP_003575540.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella ruminicola
23]
gi|294473551|gb|ADE82940.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella ruminicola
23]
Length = 247
Score = 202 bits (513), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 139/227 (61%), Gaps = 2/227 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA RG R GH+ G++ I + +G+K LT++ FS NW R
Sbjct: 11 PQHIAIIMDGNGRWAMERGKDRSFGHQAGVDAVRRITSECTRLGVKFLTLYTFSTENWNR 70
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L+ + L+ + KNN++ RV+G+R + D + L E E+ T N +
Sbjct: 71 PADEVAALMGLVLTSLEDEIFM--KNNVRFRVVGDRSRIPDTVNKKLAETEEHTAKNDAM 128
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ +A +YSS+ E++ A K I Q+++ G + + + I + L T+ +PDP+L+IRTGG
Sbjct: 129 TMVVALSYSSKLELTTATKQIAQEVKEGKLDVNSITEETINERLWTNFMPDPELLIRTGG 188
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S++LLWQ+AYSE F YWPDF E A+ Y R RRFG
Sbjct: 189 EIRISNYLLWQIAYSELYFCDTYWPDFMEEDLHKAIYSYQSRQRRFG 235
>gi|315172519|gb|EFU16536.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX1346]
Length = 271
Score = 202 bits (513), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 100/235 (42%), Positives = 143/235 (60%), Gaps = 4/235 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH++G++ +I A+ +G+K LT++AFS NW+R
Sbjct: 27 PQHIAIIMDGNGRWAQNRRLPRIAGHKEGMDTVKKITKHASHLGVKVLTLYAFSTENWKR 86
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L++L F L K N+KV V+G + L +K A +QT+ NTG+
Sbjct: 87 PTDEVNFLMQLPVDFFDTFVPELIKENVKVNVMGYQEFLPSHTQDAVKRAIEQTKDNTGM 146
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY +R E+ A+K I + + + ++ IA +L T +P DP+L+I
Sbjct: 147 VLNFALNYGARAELLTAMKQIAAKVSEKAYTADEITEETIADHLMTGFLPTELRDPELLI 206
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
RT GE+R+S+FLLWQ+AYSE F WPDFS + A+ + R+RRFGGL +
Sbjct: 207 RTSGEERISNFLLWQIAYSELFFTKALWPDFSGDTLETAIASFQNRNRRFGGLKE 261
>gi|325286848|ref|YP_004262638.1| Undecaprenyl pyrophosphate synthase [Cellulophaga lytica DSM 7489]
gi|324322302|gb|ADY29767.1| Undecaprenyl pyrophosphate synthase [Cellulophaga lytica DSM 7489]
Length = 246
Score = 201 bits (512), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 140/232 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
PDH+ IIMDGNGRWA +G R GH G++ ++V A++G+ LT++ FS NW R
Sbjct: 13 PDHLAIIMDGNGRWAKQKGKLRIFGHENGVKTVRKVVENCAKLGVGYLTLYTFSTENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++++ S LKK +L KNNIK+ IGN L LK +T NTG+
Sbjct: 73 PKLEVDTLMRILVSSLKKEVKTLNKNNIKLNAIGNLSLLPAKAGEELKNVMSKTSANTGM 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y SRDEI A++ I +++ + ++D +I +L T ++PD DL+IRT G
Sbjct: 133 TLTLALSYGSRDEIRTAVQEISIKVKNNIISPENIDEIIINNHLYTQNLPDVDLLIRTSG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AY+E F WPDF A+ Y R+RRFG S++
Sbjct: 193 EHRISNFLLWQIAYAELYFTDVLWPDFKEHHLVDAIKNYQNRERRFGKTSEQ 244
>gi|221198318|ref|ZP_03571364.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
multivorans CGD2M]
gi|221208257|ref|ZP_03581261.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
multivorans CGD2]
gi|221215461|ref|ZP_03588425.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
multivorans CGD1]
gi|221164645|gb|EED97127.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
multivorans CGD1]
gi|221171905|gb|EEE04348.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
multivorans CGD2]
gi|221182250|gb|EEE14651.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
multivorans CGD2M]
Length = 251
Score = 201 bits (512), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 140/233 (60%), Gaps = 3/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH +G++ +V A G++ LT+FAFS NWRR
Sbjct: 8 PRHIAIIMDGNGRWATERRLPRVAGHTRGVDAVRAVVEGCARAGVEYLTLFAFSSENWRR 67
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L + L++ L N I++RV+G+ + I +++ AE +T NT L
Sbjct: 68 PSDEVSFLMRLFITALEREIGKLHANGIRLRVVGDLERFEPRIRELIRRAETKTARNTRL 127
Query: 131 NLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L IA NY R +I +A K + Q G +V A +L + P+PDL IRTG
Sbjct: 128 TLTIAANYGGRWDILQATKKLVEQAAREGREV--EVTEESFAPHLAMAYAPEPDLFIRTG 185
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+R+S+FLLWQ+AY+EF F +YWPDF AL Y R+RRFG S +
Sbjct: 186 GEQRVSNFLLWQLAYAEFYFTNKYWPDFDGAALAEALASYTERERRFGRTSAQ 238
>gi|300361908|ref|ZP_07058085.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus gasseri
JV-V03]
gi|300354527|gb|EFJ70398.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus gasseri
JV-V03]
Length = 239
Score = 201 bits (512), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 100/231 (43%), Positives = 143/231 (61%), Gaps = 3/231 (1%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+H+ IIMDGNGRWA R LPR GHR G++ I AA E+GIK LT++AFS NW RP
Sbjct: 9 NHLAIIMDGNGRWAKKRHLPRFVGHRHGMDNIRNIALAANEMGIKVLTLYAFSTENWARP 68
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E++ L++L F K L +NN++V ++G L + V ++A T NTG+
Sbjct: 69 TDEVNYLMRLPIDFFDKFMPELMENNVRVNIMGFLDELPEKTYLVTQKAMSDTANNTGMI 128
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP---DPDLIIRT 188
L AFNY SR EI+ ++ I +++G + +D+D +++ +L T + DPDL+IRT
Sbjct: 129 LNFAFNYGSRREITAGVQKIAHQVKAGEINPNDIDEKMVSDHLLTHSLTPYDDPDLLIRT 188
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE+RLS+FLLWQ+AY+EF F + WPDF + + Y R+RRFG L
Sbjct: 189 SGEERLSNFLLWQMAYTEFSFSNKLWPDFDKNDLEKLVKDYYGRNRRFGKL 239
>gi|308177456|ref|YP_003916862.1| di-trans,poly-cis-decaprenylcistransferase [Arthrobacter
arilaitensis Re117]
gi|307744919|emb|CBT75891.1| di-trans,poly-cis-decaprenylcistransferase [Arthrobacter
arilaitensis Re117]
Length = 268
Score = 201 bits (512), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 138/232 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ I+MDGNGRWA RGLPR GHR G +++A A E+G+K ++++AFS NW+R
Sbjct: 34 PEHVAIVMDGNGRWANQRGLPRTEGHRAGEAALLDVMAGAVELGVKYVSVYAFSTENWKR 93
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + L++ +L +++R G L ++ L+ AE+ T+ N G
Sbjct: 94 SPEEVRFLMGFSRDVLRRQRDTLNSWGVRIRWSGREPKLWKSVINELRAAEELTQDNQGC 153
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R E+ A+ I +D+ +G + + V I KYL ++PD DL +RT G
Sbjct: 154 QLTMCVNYGGRAELGDAVSAIAKDVAAGKLRASSVGEKTIGKYLHAPELPDVDLFLRTSG 213
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R S+FLLWQ AY+E VF+ E WPD R F A+ +Y RDRR+GG K
Sbjct: 214 EQRTSNFLLWQSAYAEMVFLDELWPDVDRRTLFRAVEEYARRDRRYGGAVDK 265
>gi|170692146|ref|ZP_02883309.1| undecaprenyl diphosphate synthase [Burkholderia graminis C4D1M]
gi|170142576|gb|EDT10741.1| undecaprenyl diphosphate synthase [Burkholderia graminis C4D1M]
Length = 260
Score = 201 bits (512), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 101/234 (43%), Positives = 144/234 (61%), Gaps = 5/234 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH +G++ V A A G++ LT+FAFS NWRR
Sbjct: 17 PRHIAIIMDGNGRWATQRRLPRVAGHTRGVDAVRAAVEACARQGVEYLTLFAFSSENWRR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L + L++ L N I++RV+G+ D I ++K AE +T N+ L
Sbjct: 77 PNDEVSFLMRLFVTALEREIGKLHANGIRLRVVGDLERFDARIRDLIKRAETKTARNSRL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSH--DVDSSLIAKYLDTSDVPDPDLIIRT 188
L IA NY R +I +A + + +E ++ +V+ A++L + P+PDL IRT
Sbjct: 137 TLTIAANYGGRWDIMQATRKL---VEQAALAGKPVEVNEDSFAEHLSMAYAPEPDLFIRT 193
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GGE+R+S+FLLWQ+AY+EF F +WPDF + A+ Y R+RRFG S +
Sbjct: 194 GGERRVSNFLLWQLAYTEFYFTDTFWPDFDADALGRAIASYGERERRFGRTSAQ 247
>gi|254252063|ref|ZP_04945381.1| Di-trans-poly-cis-decaprenylcistransferase [Burkholderia dolosa
AUO158]
gi|124894672|gb|EAY68552.1| Di-trans-poly-cis-decaprenylcistransferase [Burkholderia dolosa
AUO158]
Length = 260
Score = 201 bits (512), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 102/233 (43%), Positives = 140/233 (60%), Gaps = 3/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH +G++ +V A G++ LT+FAFS NWRR
Sbjct: 17 PRHIAIIMDGNGRWATERRLPRVAGHTRGVDAVRAVVEGCARAGVEYLTLFAFSSENWRR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L + L++ L N I++RV+G+ + I +++ AE +T NT L
Sbjct: 77 PTEEVSFLMRLFITALEREVGKLHANGIRLRVVGDLERFEPRIRELIRRAETKTARNTRL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L IA NY R +I +A K + Q G +V A +L + P+PDL IRTG
Sbjct: 137 TLTIAANYGGRWDILQATKKLVEQAAREGREI--EVTEEAFAPHLAMAYAPEPDLFIRTG 194
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+R+S+FLLWQ+AY+EF F +YWPDF A+ Y R+RRFG S +
Sbjct: 195 GEQRVSNFLLWQLAYAEFYFTDKYWPDFDGAALADAIASYTERERRFGRTSAQ 247
>gi|206603800|gb|EDZ40280.1| Di-trans-poly-cis-decaprenylcistransferase [Leptospirillum sp.
Group II '5-way CG']
Length = 264
Score = 201 bits (512), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 92/229 (40%), Positives = 139/229 (60%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+PP H+ IIMDGNGRWA R +PR GHR G IV A I LT++AFS NW
Sbjct: 25 NPPRHVAIIMDGNGRWARKRHMPRIVGHRAGATAVRTIVTATRSWEIPYLTLYAFSWENW 84
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+ L+ L++ ++ + ++ + I+ V+G+R L + + AE +T+ N
Sbjct: 85 SRPRQEVDALMGLLEEYIDREIRTMMEREIRFFVVGDRARLPSSVRSKIAWAERETKDNG 144
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+ L +A +YS R+EI RA++ + +D++ + + ++ ++YL+TS +P PDL+IRT
Sbjct: 145 RMVLTLALSYSGREEIVRAVQRLAEDVQKDRLDPDQISETVFSQYLETSILPPPDLLIRT 204
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
GE R+S+FLLWQ+AY+E F P WPDF E F A+ + R RRFG
Sbjct: 205 SGEVRISNFLLWQLAYTEMYFTPTLWPDFREEDFRQAIEDFQERRRRFG 253
>gi|332994200|gb|AEF04255.1| undecaprenyl diphosphate synthase [Alteromonas sp. SN2]
Length = 260
Score = 201 bits (512), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 144/227 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R GH+ G+E +V A + GI++LT+FAFS NW+R
Sbjct: 23 PKHVAIIMDGNGRWAQKKGKIRTFGHKAGVESVRAVVRFARQTGIESLTLFAFSSENWKR 82
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L L L KN ++++VIG+ + D ++ +++AE+ T N L
Sbjct: 83 PEEEVSVLMELFNLVLNSEAKRLHKNGVRLKVIGDLSAFDSKLVGKIRKAEEMTSGNNDL 142
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I A K + + ++ G + D+D ++ ++ T+ +P+ DL+IRTGG
Sbjct: 143 VLNIAANYGGRWDIVNAAKEVAEKVKQGEMSLQDIDEAVFNQHTSTASLPELDLLIRTGG 202
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+FLLWQ AY+E F WPDF+ ++F A++ +N+R RRFG
Sbjct: 203 EHRISNFLLWQCAYAELYFTDVLWPDFNEDVFQLAVDDFNVRQRRFG 249
>gi|320527473|ref|ZP_08028654.1| di-trans,poly-cis-decaprenylcistransferase [Solobacterium moorei
F0204]
gi|320132186|gb|EFW24735.1| di-trans,poly-cis-decaprenylcistransferase [Solobacterium moorei
F0204]
Length = 234
Score = 201 bits (512), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 100/227 (44%), Positives = 142/227 (62%), Gaps = 1/227 (0%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA A+G PR +GH G + I AA E+GIK LT++AFS NW+R
Sbjct: 6 HLAIIMDGNGRWAKAQGKPRTSGHLVGSDNVRTIAIAADEMGIKYLTLYAFSTENWKRTA 65
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E++ ++KL F KK ++R+IG L VL++AE++++ N GL+L
Sbjct: 66 DEVNYIMKLPAFFFKKYMQEFLDRGFRMRIIGELDMLPKATQKVLRDAEEESKDNHGLSL 125
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
I NY SR EI A K QD+ G + D++ +Y+ T D P DL+IRT GE+
Sbjct: 126 NICMNYGSRREILLAAKKYAQDVVDGK-ATLDIEEEDFDQYMMTKDFPPVDLLIRTSGEQ 184
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
R+S++LLWQ+AY+E F+PE WP+F+ E+ L++Y RDRRFGG+
Sbjct: 185 RISNYLLWQIAYAELEFVPESWPEFTPEVLKRCLDEYQNRDRRFGGV 231
>gi|225849934|ref|YP_002730168.1| di-trans, poly-cis-decaprenylcistransferase [Persephonella marina
EX-H1]
gi|225645945|gb|ACO04131.1| di-trans, poly-cis-decaprenylcistransferase [Persephonella marina
EX-H1]
Length = 233
Score = 201 bits (512), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 99/230 (43%), Positives = 142/230 (61%), Gaps = 6/230 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ +IMDGNGRWA RGLPR GHR+G + + A +VGIK L++FAFS NW R
Sbjct: 9 PEHVAVIMDGNGRWAKRRGLPRVFGHREGAKAVERTLKIANDVGIKWLSVFAFSTENWGR 68
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ ++ L+ ++ L K+NI++R +G R L + IL + E E T G+
Sbjct: 69 PKEEVNAIMSLLVEYINTKVPHLVKDNIRLRFMGRRDGLPEMILESMYEGEKATEKCDGM 128
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
N +A NYS + EI A+K I I SG ++D +YL ++P+PDL+IRT G
Sbjct: 129 NFVVALNYSGKAEIVDAVKKI---ISSG---KREIDEEEFREYLYIPEMPEPDLLIRTSG 182
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
EKR+S+F+LW++AY+E F WPDF+ E F AL Y R+RRFG ++
Sbjct: 183 EKRISNFMLWELAYTELYFTEVLWPDFNEEEFLKALYFYQSRERRFGKVT 232
>gi|255067011|ref|ZP_05318866.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria sicca ATCC
29256]
gi|255048836|gb|EET44300.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria sicca ATCC
29256]
Length = 248
Score = 201 bits (512), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 100/235 (42%), Positives = 145/235 (61%), Gaps = 6/235 (2%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+S P HI +IMDGNGRWA R LPR GH++G++ +V A++G++ LT+FAFS N
Sbjct: 12 TSVPKHIAVIMDGNGRWAKKRFLPRVMGHKRGLDALENMVKHCAKLGVQYLTVFAFSTEN 71
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+S L+ L L+K L +NN++++V+G+R + IL ++EAE T N
Sbjct: 72 WRRPEDEVSFLMGLFLQALQKQVRRLHENNMRLKVLGSRERFNRQILQGIEEAEALTANN 131
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
TGL L IA +Y R +I +A + + S ++ +AK+L D P+PDL IR
Sbjct: 132 TGLTLSIAADYGGRWDILQAANKLIAEGVS------EITEDALAKHLMLGDAPEPDLFIR 185
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE R+S+FLLWQ+AY+E F WPDF + A+ + R+RRFG S++
Sbjct: 186 TGGETRISNFLLWQMAYAELYFTDTLWPDFDSKALDDAVASFQKRERRFGRTSEQ 240
>gi|328954576|ref|YP_004371910.1| Undecaprenyl pyrophosphate synthase [Desulfobacca acetoxidans DSM
11109]
gi|328454900|gb|AEB10729.1| Undecaprenyl pyrophosphate synthase [Desulfobacca acetoxidans DSM
11109]
Length = 256
Score = 201 bits (512), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 135/227 (59%), Gaps = 1/227 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG R GH++G E EIV + +G+ LT++AFS NW+R
Sbjct: 15 PRHVAIIMDGNGRWAQKRGFSRVRGHQEGAESVREIVRISRNLGLGYLTLYAFSEENWQR 74
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L+ +L++ L+ NI R IG+ L + +L A T ++ +
Sbjct: 75 PPKEVQALMHLLTHYLQRELAELRAQNIAFRAIGDLSQLPSKVRSLLDTAAKST-IHPAM 133
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y +R EI +A + + + + G + D++ + A+ L T D+PDPDL+IRT G
Sbjct: 134 TLTLALSYGARSEIVQAARRLSEQVRRGEMQPADINGEVFARSLYTGDMPDPDLLIRTSG 193
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+FLLWQ+AY+E F WPDF E F AL Y R RRFG
Sbjct: 194 EYRISNFLLWQLAYTELYFTETLWPDFREEEFLQALLDYQQRLRRFG 240
>gi|305665179|ref|YP_003861466.1| undecaprenyl pyrophosphate synthetase [Maribacter sp. HTCC2170]
gi|88709931|gb|EAR02163.1| undecaprenyl pyrophosphate synthetase [Maribacter sp. HTCC2170]
Length = 246
Score = 201 bits (512), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 143/232 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R GH G++ V + +G++ LT++ FS NW R
Sbjct: 13 PKHLAIIMDGNGRWAKQKGKFRVFGHENGVKTVRSTVESCVRIGLEYLTLYTFSTENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L+ S LKK + KNN+++ IG+ SL + L E ++T+ NTG+
Sbjct: 73 PKIEVDTLMRLLVSSLKKELKTFNKNNVRLNTIGDIKSLPNRAYIELVEVMEKTKGNTGM 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y +R+E+ A++ I +++ + +D ++I +L T ++PD DL+IRT G
Sbjct: 133 TLTLALSYGAREELKNAVQQIAVKVKNNIISPESIDETIINNHLYTQNLPDVDLLIRTSG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AY+E FI +WPDF + A+ Y R+RRFG S++
Sbjct: 193 EHRISNFLLWQIAYAELYFIDVFWPDFKEQHLVEAIINYQNRERRFGKTSEQ 244
>gi|300691600|ref|YP_003752595.1| undecaprenyl pyrophosphate synthetase (di-trans,
poly-cis-decaprenylcistransferase) [Ralstonia
solanacearum PSI07]
gi|299078660|emb|CBJ51318.1| undecaprenyl pyrophosphate synthetase (di-trans,
poly-cis-decaprenylcistransferase) [Ralstonia
solanacearum PSI07]
Length = 258
Score = 201 bits (512), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 98/232 (42%), Positives = 139/232 (59%), Gaps = 2/232 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R LPR AGH +G++ V AA G++ LT+FAFS NWRR
Sbjct: 16 PRHVAIIMDGNGRWATERHLPRMAGHSRGLDAVRAAVEAAGNRGVRYLTLFAFSSENWRR 75
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+KL + L++ L + I++RV+G+ + I +++EAE +T N+GL
Sbjct: 76 PAEEVSFLMKLFMTALRREVSKLHDSGIRLRVVGDLGAFSPRIQLLIREAEAKTAANSGL 135
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ IA NY R +I +A++ + D + + ++ YL + +PDL IRTGG
Sbjct: 136 TVTIAANYGGRWDILQAMRALVAD--QPDIAPEAITEEALSPYLSLAYASEPDLFIRTGG 193
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FLLWQ+AYSE F YWPDF A Y R+RRFG S +
Sbjct: 194 EQRISNFLLWQLAYSELYFTERYWPDFDAAEMDRAFAWYRNRERRFGRTSAQ 245
>gi|255009914|ref|ZP_05282040.1| putative undecaprenyl pyrophosphate synthetase [Bacteroides
fragilis 3_1_12]
gi|313147702|ref|ZP_07809895.1| undecaprenyl pyrophosphate synthetase [Bacteroides fragilis 3_1_12]
gi|313136469|gb|EFR53829.1| undecaprenyl pyrophosphate synthetase [Bacteroides fragilis 3_1_12]
Length = 244
Score = 201 bits (512), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 98/232 (42%), Positives = 142/232 (61%), Gaps = 2/232 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG R GH+ G E + I AA +G+K LT++ FS NW R
Sbjct: 13 PKHVAIIMDGNGRWAKQRGRERSFGHQAGAETVHIITEEAARLGVKFLTLYTFSTENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L+ +++ + KNNI R+IG+ L +++ L ++T NTG+
Sbjct: 73 PSDEVAALMSLLFDSIEEE--TFMKNNISFRIIGDINKLPENVRKRLNACVERTSKNTGM 130
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +YS+R EI+ A + I ++ G + ++ S I +L T+ +PDPDL+IRTGG
Sbjct: 131 CLVLALSYSARWEITEAARQIATLVQKGEMTPEEITSESIQTHLTTNFMPDPDLLIRTGG 190
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E RLS++LLWQ AYSE F +WPDF E A+ Y R+RRFG S++
Sbjct: 191 EIRLSNYLLWQCAYSELYFCETFWPDFKEEELHKAICDYQRRERRFGKTSEQ 242
>gi|149278815|ref|ZP_01884950.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) [Pedobacter
sp. BAL39]
gi|149230434|gb|EDM35818.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) [Pedobacter
sp. BAL39]
Length = 246
Score = 201 bits (512), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 98/232 (42%), Positives = 144/232 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA +G R GH G+ +IV A++GIK LT++AFS NW R
Sbjct: 13 PEHIAIIMDGNGRWAKNQGKFRHFGHESGVLSLKDIVEGCADIGIKYLTVYAFSTENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L++L+ S + + +L KNNI++ IG+ SL + LK A D T NT
Sbjct: 73 PPEEVNMLMELLISTINQETPTLNKNNIRLNAIGDIASLPQKCIDDLKSAMDNTAGNTRC 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +YS++ EI A + + + ++ + ++ A L T+++PDP+L+IRT G
Sbjct: 133 TLTLALSYSAKWEILEAARKLAKKVKDQEINIDEITEENFASQLTTTNIPDPELMIRTSG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AY+E F WPDF RE F A+ Y R+RRFG +S++
Sbjct: 193 EHRVSNFLLWQMAYTELYFTETLWPDFKREDLFEAIVDYQKRERRFGKISEQ 244
>gi|257068869|ref|YP_003155124.1| Undecaprenyl pyrophosphate synthetase [Brachybacterium faecium DSM
4810]
gi|256559687|gb|ACU85534.1| Undecaprenyl pyrophosphate synthetase [Brachybacterium faecium DSM
4810]
Length = 269
Score = 201 bits (512), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 90/228 (39%), Positives = 141/228 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ ++MDGNGRWA RGLPR AGH G ++VA A ++G+ +L+ +AFS NW+R
Sbjct: 30 PGHVAVVMDGNGRWANRRGLPRTAGHEAGEAALLDVVAGALQIGVTHLSAYAFSTENWKR 89
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ +S L++ +L +++ IG L ++ L+EAE+ TR NT +
Sbjct: 90 SPEEVRFLMGFSRSVLRRQRDTLNSWGVRIVWIGRAQRLWGSVIKELREAEELTRHNTRM 149
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L++ N+ R EI A++ I ++ +G + + + A++L+ D+PD DL +RT G
Sbjct: 150 TLYMCVNHGGRAEIVDAVREIAEEARAGRLSARGITMKSFARHLNDPDMPDVDLFLRTSG 209
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S+FLLWQ AY+E VF+ E WPD R + + A+ +Y RDRR+GG
Sbjct: 210 EQRTSNFLLWQAAYAELVFVEELWPDVDRRVLWRAITEYARRDRRYGG 257
>gi|167752328|ref|ZP_02424455.1| hypothetical protein ALIPUT_00572 [Alistipes putredinis DSM 17216]
gi|167660569|gb|EDS04699.1| hypothetical protein ALIPUT_00572 [Alistipes putredinis DSM 17216]
Length = 243
Score = 201 bits (511), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 137/227 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWAA GL R GH +G+E + AA G++ LT++AFS NW R
Sbjct: 8 PRHVAIIMDGNGRWAAQHGLERFEGHIRGVESVRRAIQAATRHGVRYLTLYAFSTENWGR 67
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L++L + L ++VR+IG++ + + L + E++T L
Sbjct: 68 PAAEVDALMELFCKSIINETPELAAQGVRVRIIGDKSRFPEKVKHHLDQIENRTATGKRL 127
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NYSSR EI A++ + + +G ++ +++ L T+ PDPDL+IRT G
Sbjct: 128 TLQLALNYSSRSEIVHAMQGLARRAAAGIFSPEEISEQTVSEALYTAGCPDPDLLIRTSG 187
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+RLS+FLLWQ AY+E F P WPDF+ E F AL++Y R+RRFG
Sbjct: 188 EQRLSNFLLWQAAYAELFFTPVLWPDFTEEDFAQALDEYARRERRFG 234
>gi|325954735|ref|YP_004238395.1| undecaprenyl pyrophosphate synthase [Weeksella virosa DSM 16922]
gi|323437353|gb|ADX67817.1| Undecaprenyl pyrophosphate synthase [Weeksella virosa DSM 16922]
Length = 261
Score = 201 bits (511), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 141/232 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA G R GH+ ++ + A E+GI LT++AFS NW R
Sbjct: 28 PQHIAIIMDGNGRWAKKTGHERTFGHKNALKAVRAAIEACRELGIPYLTLYAFSSENWNR 87
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L+ ++K L +NN+++ VIGN L L LK+ + T+ NTG
Sbjct: 88 PKLEVSLLMTLLAQTIQKEIKELHQNNVRLNVIGNVERLPQATLKELKKGLELTQNNTGS 147
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y S++EI A K+I Q ++G + ++D L ++L T +P DL+IRT G
Sbjct: 148 TLTLALSYGSKEEILSATKSIAQSYKNGEISLEEIDEQLFEQHLYTRHLPMVDLMIRTSG 207
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FLLWQ+AY+E F WPDF+ E + A+ Y R+RRFG S++
Sbjct: 208 EERISNFLLWQIAYAELYFTDTLWPDFTHENLYEAVLNYQGRERRFGKTSEQ 259
>gi|223933897|ref|ZP_03625860.1| undecaprenyl diphosphate synthase [Streptococcus suis 89/1591]
gi|223897423|gb|EEF63821.1| undecaprenyl diphosphate synthase [Streptococcus suis 89/1591]
Length = 225
Score = 201 bits (511), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 101/225 (44%), Positives = 134/225 (59%), Gaps = 4/225 (1%)
Query: 19 DGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISEL 78
DGNGRWA R PR GH+ G++ ++ A+++G+K LT++AFS NW RP E+ +
Sbjct: 1 DGNGRWAKKRMQPRIMGHKAGMDALQKVTKTASDLGVKVLTVYAFSTENWSRPEKEVKFI 60
Query: 79 VKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNY 138
+ L F K L NN+K+++IG+ L L L +AE +T+ NTGL L A NY
Sbjct: 61 MNLPVEFYDKYVPELHANNVKIQMIGDHSKLPVPTLNALYKAEQKTKSNTGLILNFALNY 120
Query: 139 SSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLIIRTGGEKRL 194
RDE++RA+K I QD+ D+D LIA YL T + DPDL+IRT GE RL
Sbjct: 121 GGRDEVTRAVKAIAQDVLDAKFNPGDIDEKLIADYLYTGTLSPTLRDPDLVIRTSGELRL 180
Query: 195 SDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
S+FL WQ AYSE F WPDF E A+ +YN R RRFGG+
Sbjct: 181 SNFLPWQTAYSELYFTDIAWPDFDGEALKLAIKEYNRRHRRFGGV 225
>gi|319638836|ref|ZP_07993594.1| undecaprenyl pyrophosphate synthetase [Neisseria mucosa C102]
gi|317399740|gb|EFV80403.1| undecaprenyl pyrophosphate synthetase [Neisseria mucosa C102]
Length = 248
Score = 201 bits (511), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 101/235 (42%), Positives = 145/235 (61%), Gaps = 6/235 (2%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S+ P HI +IMDGNGRWA R LPR GH++G++ +V AE+G++ LT+FAFS N
Sbjct: 12 SAIPRHIAVIMDGNGRWAKKRFLPRVMGHKRGLDALENMVKHCAELGVRYLTVFAFSTEN 71
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+S L+ L L+K L NN++++VIG+R + +IL ++ AE T N
Sbjct: 72 WRRPEEEVSFLMGLFLQALQKQVRRLHDNNMRLKVIGSRERFNAEILKGIEAAEALTANN 131
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
TGL L IA +Y R +I +A + I G ++ +++YL D P+PDL IR
Sbjct: 132 TGLTLSIAADYGGRWDILQAANQL---IAEGVT---EITEEALSRYLMLGDAPEPDLFIR 185
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE R+S+FLLWQ+AY+E F WPDF+ + A+ + R+RRFG S++
Sbjct: 186 TGGETRISNFLLWQMAYAELYFTDTLWPDFNEKSLNEAIVSFQKRERRFGRTSEQ 240
>gi|218245019|ref|YP_002370390.1| undecaprenyl pyrophosphate synthase [Cyanothece sp. PCC 8801]
gi|218165497|gb|ACK64234.1| undecaprenyl diphosphate synthase [Cyanothece sp. PCC 8801]
Length = 249
Score = 201 bits (511), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 90/229 (39%), Positives = 138/229 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ +IMDGNGRWA RGLPR GH++G++ +++ + G+ LT +AFS NW R
Sbjct: 21 PNHVAVIMDGNGRWAKRRGLPRIMGHQRGVDTLKDLLRCCKDWGVPALTAYAFSTENWGR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P+ E+ L+ L + L++ + + N+++R +GN L + + + T+ NTG+
Sbjct: 81 PLDEVEFLMTLFERVLRRELREMMEENVRIRFVGNLAVLPPSLQEEIARSMQDTQNNTGI 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ +A NY R EI +A + I ++ G + D+D S+ +L T + PDL+IRT G
Sbjct: 141 DFTVATNYGGRQEIVQACQAIATQVQQGLLNPQDIDESIFEDHLYTKGIAHPDLLIRTSG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+FLLWQ+AY+E WPDF+RE F AL Y R+RRFG +
Sbjct: 201 EMRLSNFLLWQLAYAEIYVTQTLWPDFNREEFHQALLAYQQRERRFGKI 249
>gi|85712042|ref|ZP_01043096.1| Undecaprenyl pyrophosphate synthase [Idiomarina baltica OS145]
gi|85694228|gb|EAQ32172.1| Undecaprenyl pyrophosphate synthase [Idiomarina baltica OS145]
Length = 257
Score = 201 bits (511), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 98/243 (40%), Positives = 149/243 (61%), Gaps = 6/243 (2%)
Query: 6 MSSSP------PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
M SP P H+ IIMDGNGRWA +G R GH+KG E V+ A GI++LT
Sbjct: 1 MKQSPTIQQVMPKHVAIIMDGNGRWAKQQGKRRTFGHKKGAEAVRRAVSFARRNGIQSLT 60
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
+FAFS NW RP +E+S L++L + LKK LK+N+IK++VIG++ + +++
Sbjct: 61 LFAFSSENWNRPAAEVSLLMELFINVLKKEADKLKQNDIKLQVIGDKTQFSSRLRKHIEQ 120
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV 179
E+ T G+ L IA NY + +I++A + + + + + + D+ +YL +D
Sbjct: 121 TEEMTAECRGMTLNIAANYGGQWDITQATRKVATAVANNELAASDITERTFERYLCLADQ 180
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDL+IRTGGE+R+S+FLLWQ+AY+EF F P WPDF + F A+ ++ R+RR+G
Sbjct: 181 AKPDLLIRTGGEQRVSNFLLWQIAYAEFYFSPILWPDFDDQAFASAVAEFAQRERRYGLT 240
Query: 240 SKK 242
S++
Sbjct: 241 SEQ 243
>gi|78066794|ref|YP_369563.1| undecaprenyl pyrophosphate synthetase [Burkholderia sp. 383]
gi|77967539|gb|ABB08919.1| Undecaprenyl pyrophosphate synthetase [Burkholderia sp. 383]
Length = 260
Score = 201 bits (511), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 102/233 (43%), Positives = 141/233 (60%), Gaps = 3/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH +G++ +V A G++ LT+FAFS NWRR
Sbjct: 17 PRHIAIIMDGNGRWATERRLPRVAGHTRGVDAVRAVVEGCARAGVEYLTLFAFSSENWRR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L + L++ L N I++RV+G+ + I +++ AE +T NT L
Sbjct: 77 PNDEVSFLMRLFITALEREVGKLHANGIRLRVVGDLDRFEPRIRELIRRAETKTARNTRL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L IA NY R +I +A K + Q + G +V A +L + P+PDL IRTG
Sbjct: 137 TLTIAANYGGRWDILQATKKLIEQAVREGREV--EVTEDAFAPHLAMAYAPEPDLFIRTG 194
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+R+S+FLLWQ+AY+EF F +YWPDF A+ Y R+RRFG S +
Sbjct: 195 GEQRVSNFLLWQLAYAEFYFTDKYWPDFDGAALADAMASYTERERRFGRTSAQ 247
>gi|228470934|ref|ZP_04055779.1| di-trans,poly-cis-decaprenylcistransferase [Porphyromonas uenonis
60-3]
gi|228307331|gb|EEK16345.1| di-trans,poly-cis-decaprenylcistransferase [Porphyromonas uenonis
60-3]
Length = 238
Score = 201 bits (511), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 100/238 (42%), Positives = 145/238 (60%), Gaps = 1/238 (0%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
MM P HI IIMDGNGRWA RGL R GH++G++ I++A A+ GI LT++AFS
Sbjct: 1 MMKQQTPQHIAIIMDGNGRWAQRRGLSRSYGHKQGVDALETILSAVADRGIPYLTVYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP +E++ +++L+ L K +++R IG+ L + L+++ +QT
Sbjct: 61 TENWNRPEAEVNYIMQLLAEGLHHYTPRFIKEGVRLRAIGDIDQLPAETAAQLRDSMEQT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVD-SSLIAKYLDTSDVPDPD 183
+ + L +A +YSS E+S AI++I D++SG + + D+ LI YL TS +P PD
Sbjct: 121 KDGKRITLGMALSYSSYTEVSHAIQHIVADVQSGRLSNDDLSRPDLINDYLYTSGMPMPD 180
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
L+IRTGGE+RLS+FLL Q AY+E F WPDF AL + LR RRFG + +
Sbjct: 181 LLIRTGGEQRLSNFLLLQSAYTELYFTDTLWPDFDEAELDKALADFALRQRRFGTVPQ 238
>gi|261378086|ref|ZP_05982659.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria cinerea ATCC
14685]
gi|269145535|gb|EEZ71953.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria cinerea ATCC
14685]
Length = 248
Score = 201 bits (511), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 100/240 (41%), Positives = 146/240 (60%), Gaps = 6/240 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + ++ P HI +IMDGNGRWA R LPR GH++G++ +V A++G++ LT+FA
Sbjct: 7 AVLEHTAIPKHIAVIMDGNGRWAKKRFLPRIMGHKRGLDALENMVKHCAKLGVQYLTVFA 66
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP E+S L+ L L+K L +NN++++++G+R + IL ++EAE
Sbjct: 67 FSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNMRLKILGSRERFNQQILQGIEEAEA 126
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTGL L IA +Y R +I +A + + S ++ +AKYL D P+P
Sbjct: 127 LTANNTGLTLSIAADYGGRWDILQAANKLIAEGVS------EITEDTLAKYLMLGDAPEP 180
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL IRTGGE R+S+FLLWQ+AY+E F WPDF A+ + R+RRFG S++
Sbjct: 181 DLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDETALDAAVASFQKRERRFGRTSEQ 240
>gi|295689594|ref|YP_003593287.1| undecaprenyl diphosphate synthase [Caulobacter segnis ATCC 21756]
gi|295431497|gb|ADG10669.1| undecaprenyl diphosphate synthase [Caulobacter segnis ATCC 21756]
Length = 259
Score = 201 bits (511), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 99/242 (40%), Positives = 140/242 (57%), Gaps = 3/242 (1%)
Query: 2 VASMMSSSPPD---HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNL 58
V++ PD H+ IIMDGNGRWA RG+PR GHR G+ V A + L
Sbjct: 10 VSARAGVGAPDQRLHVAIIMDGNGRWAKQRGMPRVLGHRAGVNALKRTVEGAQSQNVGVL 69
Query: 59 TIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
T+F FS NWRRP E+SEL+ L+K++++ L + +KVR+IG R L DI V++
Sbjct: 70 TVFGFSTENWRRPAQEVSELMGLLKAYVESDLERLARAGVKVRIIGRRAGLSPDIAEVIE 129
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
AE +T NT L +AFNY + +I+ A + + + G D+ + L T+
Sbjct: 130 RAEKRTAQNTEFVLQVAFNYGGQADIADAARAFAEKVVRGEARPEDLTEESFGQLLSTAA 189
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
P PDLI+RT GE+R+S+FLLW AY+E VF WPD+ E A+ +Y RDRR+GG
Sbjct: 190 APPPDLIVRTSGERRISNFLLWDSAYAELVFQDVLWPDYGPEALAAAIAEYRRRDRRYGG 249
Query: 239 LS 240
++
Sbjct: 250 VA 251
>gi|107028805|ref|YP_625900.1| undecaprenyl diphosphate synthase [Burkholderia cenocepacia AU
1054]
gi|116690036|ref|YP_835659.1| undecaprenyl diphosphate synthase [Burkholderia cenocepacia HI2424]
gi|170733371|ref|YP_001765318.1| undecaprenyl diphosphate synthase [Burkholderia cenocepacia MC0-3]
gi|206560449|ref|YP_002231213.1| undecaprenyl pyrophosphate synthetase [Burkholderia cenocepacia
J2315]
gi|254247887|ref|ZP_04941208.1| Di-trans-poly-cis-decaprenylcistransferase [Burkholderia
cenocepacia PC184]
gi|105897969|gb|ABF80927.1| Undecaprenyl pyrophosphate synthetase [Burkholderia cenocepacia AU
1054]
gi|116648125|gb|ABK08766.1| Undecaprenyl pyrophosphate synthetase [Burkholderia cenocepacia
HI2424]
gi|124872663|gb|EAY64379.1| Di-trans-poly-cis-decaprenylcistransferase [Burkholderia
cenocepacia PC184]
gi|169816613|gb|ACA91196.1| undecaprenyl diphosphate synthase [Burkholderia cenocepacia MC0-3]
gi|198036490|emb|CAR52387.1| undecaprenyl pyrophosphate synthetase [Burkholderia cenocepacia
J2315]
Length = 260
Score = 201 bits (511), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 102/233 (43%), Positives = 141/233 (60%), Gaps = 3/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH +G++ +V A G++ LT+FAFS NWRR
Sbjct: 17 PRHIAIIMDGNGRWATERRLPRVAGHTRGVDAVRAVVEGCARAGVEYLTLFAFSSENWRR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L + L++ L N I++RV+G+ + I +++ AE +T NT L
Sbjct: 77 PNDEVSFLMRLFITALEREVGKLHANGIRLRVVGDLDRFEPRIRELIRRAETKTARNTRL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L IA NY R +I +A K + Q + G +V A +L + P+PDL IRTG
Sbjct: 137 TLTIAANYGGRWDILQATKKLVEQAVREGREV--EVTEDAFAPHLAMAYAPEPDLFIRTG 194
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+R+S+FLLWQ+AY+EF F +YWPDF A+ Y R+RRFG S +
Sbjct: 195 GEQRVSNFLLWQLAYAEFYFTDKYWPDFDGAALADAMASYTERERRFGRTSAQ 247
>gi|116051649|ref|YP_789512.1| undecaprenyl pyrophosphate synthetase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|115586870|gb|ABJ12885.1| undecaprenyl pyrophosphate synthetase [Pseudomonas aeruginosa
UCBPP-PA14]
Length = 251
Score = 201 bits (510), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 94/232 (40%), Positives = 142/232 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGN RWA R LP AGH+ G++ ++ AE G++ LT+FAFS NW+R
Sbjct: 11 PRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAEAGVEVLTLFAFSSENWQR 70
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L L++ L +N I++R+IG+R ++ ++EAE T NT
Sbjct: 71 PADEVSALMELFLVALRREVRKLDENGIRLRIIGDRTRFHPELQAAMREAEAATASNTRF 130
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY + +I +A + + ++++ G + + D+ + L+ L T D P PDL IRTGG
Sbjct: 131 LLQVAANYGGQWDIVQAAQRLAREVQGGHLAADDISAELLQGCLVTGDQPLPDLCIRTGG 190
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AY+E F +WPDF AL ++ R RRFG S++
Sbjct: 191 EHRISNFLLWQLAYAELYFSDLFWPDFKHAAMRAALADFSKRQRRFGKTSEQ 242
>gi|218781001|ref|YP_002432319.1| undecaprenyl diphosphate synthase [Desulfatibacillum alkenivorans
AK-01]
gi|218762385|gb|ACL04851.1| undecaprenyl diphosphate synthase [Desulfatibacillum alkenivorans
AK-01]
Length = 252
Score = 201 bits (510), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 90/227 (39%), Positives = 139/227 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA + + R GH +G E +V E+G+ LT++AFS NW+R
Sbjct: 19 PRHVAIIMDGNGRWAKKKLMNRVKGHEQGAETVRMVVRTTRELGVPFLTLYAFSTENWQR 78
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L+ L+K FL + +N I++ VIG L DD+ + + T +
Sbjct: 79 PKAEVMALMTLLKRFLVNEKKEMLENGIRLNVIGQTERLPDDVKAAMNHTMEATAQGRKM 138
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y R+E+ RA + + + + ++ +D S+I+++L T+ +PDPDL+IRT G
Sbjct: 139 TLTLALSYGGREELVRAFRKMAKRVADHTLDPELIDESVISQHLYTATMPDPDLMIRTSG 198
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+FLLWQ+AY+E F P+ WPDFS+E + L + R+RRFG
Sbjct: 199 EVRISNFLLWQLAYAEMAFTPKLWPDFSKEDYIQILKDFGDRERRFG 245
>gi|103487440|ref|YP_617001.1| undecaprenyl diphosphate synthase [Sphingopyxis alaskensis RB2256]
gi|98977517|gb|ABF53668.1| Undecaprenyl pyrophosphate synthetase [Sphingopyxis alaskensis
RB2256]
Length = 228
Score = 201 bits (510), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 99/234 (42%), Positives = 145/234 (61%), Gaps = 8/234 (3%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+S H+ IIMDGNGRWA R LPR AGHR G+E IV AA ++G++ +T++AFS
Sbjct: 3 VSDHAARHVAIIMDGNGRWAKKRMLPRVAGHRAGVETVRTIVRAAGDLGLEAMTLYAFSS 62
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP E+++L+ L+K F+ N++K++VIGN +L D++ ++ A D+T
Sbjct: 63 ENWKRPEEEVNDLMGLMKRFILSDLDEFAANDVKLKVIGNWRALAPDVVALIDNALDRTS 122
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N L +A NY ++DE+ RA + ++ + I +LDT+D+P DL+
Sbjct: 123 GNKRTTLAVALNYGAQDELVRAANA--------AAAIGEITAEAIEAHLDTADMPPLDLL 174
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRT GE RLS+FLLWQ AY+E F + WPDF+ AL+Q+ RDRR+GGL
Sbjct: 175 IRTSGELRLSNFLLWQSAYAELYFTEKLWPDFTPADLKAALDQFARRDRRYGGL 228
>gi|161507689|ref|YP_001577643.1| undecaprenyl pyrophosphate synthetase [Lactobacillus helveticus DPC
4571]
gi|260101371|ref|ZP_05751608.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus
helveticus DSM 20075]
gi|160348678|gb|ABX27352.1| Undecaprenyl pyrophosphate synthetase [Lactobacillus helveticus DPC
4571]
gi|260084823|gb|EEW68943.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus
helveticus DSM 20075]
gi|328465731|gb|EGF36935.1| undecaprenyl pyrophosphate synthase [Lactobacillus helveticus MTCC
5463]
Length = 244
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/233 (43%), Positives = 147/233 (63%), Gaps = 3/233 (1%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+H+ IIMDGNGRWA R PR GHR+G++ I AA ++GIK LT++AFS NW RP
Sbjct: 9 NHLAIIMDGNGRWAKKRHKPRFVGHREGMDNVERITLAADKLGIKVLTLYAFSTENWARP 68
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E++ L+ L F K +L +NN+KV ++G L + +++ A +T NTGL
Sbjct: 69 KEEVAYLMNLPVRFFDKYMPTLMENNVKVNIMGYLDELPEKTYQIVQRAMSETANNTGLI 128
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD---VPDPDLIIRT 188
L AFNY SR EI+ A++ + IE+G++ S D+ +I++YL T + DPDL+IRT
Sbjct: 129 LNFAFNYGSRREITTAMQELGGMIEAGALKSEDITEKMISQYLMTKNFGKYQDPDLLIRT 188
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
GE+R+S+FLLWQ+AYSE F + WPDF + ++ Y R+RRFG + +
Sbjct: 189 SGEQRISNFLLWQLAYSELAFSDKNWPDFDEDDLRKFVDDYKHRNRRFGKVDE 241
>gi|238852612|ref|ZP_04643022.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus gasseri
202-4]
gi|238834758|gb|EEQ26985.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus gasseri
202-4]
Length = 239
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/231 (43%), Positives = 144/231 (62%), Gaps = 3/231 (1%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+H+ IIMDGNGRWA R LPR GHR G++ I AA E+GIK LT++AFS NW RP
Sbjct: 9 NHLAIIMDGNGRWAKKRHLPRFVGHRHGMDNIRNIALAANEMGIKVLTLYAFSTENWARP 68
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E++ L++L F K L +NN++V ++G L + V ++A +T NTG+
Sbjct: 69 TDEVNYLMRLPIDFFDKFMPELMENNVRVNIMGFLDELPEKTYLVTQKAMAETANNTGMV 128
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP---DPDLIIRT 188
L AFNY SR EI+ ++ I + ++ G + D+D +++ +L T + DPDL+IRT
Sbjct: 129 LNFAFNYGSRREITAGVQEIARQVKIGKINPSDIDEKMVSDHLLTHSLTPYDDPDLLIRT 188
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE+RLS+FLLWQ+AY+EF F + WPDF + + + Y R+RRFG L
Sbjct: 189 SGEERLSNFLLWQMAYTEFSFSNKLWPDFDKNDLENLVKDYYGRNRRFGKL 239
>gi|154500381|ref|ZP_02038419.1| hypothetical protein BACCAP_04048 [Bacteroides capillosus ATCC
29799]
gi|150270886|gb|EDM98169.1| hypothetical protein BACCAP_04048 [Bacteroides capillosus ATCC
29799]
Length = 251
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 92/229 (40%), Positives = 138/229 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RGLPR AGH G E F I E+G++ LT++AFS NW+R
Sbjct: 20 PRHVAIIMDGNGRWAKKRGLPRTAGHAAGAENFRTIATYCKEIGLEYLTVYAFSTENWKR 79
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S ++ L+K +L + ++++ +K+ G+ L ++ + ++ + ++ G+
Sbjct: 80 PAEEVSAIMGLLKKYLIEAIGKMERDRVKMCFFGDLSPLPQELRDLCEQTREISKHYEGV 139
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ I NY RDE+ RA K D +G + + + YL ++ VPDPDL+IR G
Sbjct: 140 QVNICLNYGGRDELVRAAKAFALDCAAGKADPNHLTEAQFGNYLFSAGVPDPDLVIRPSG 199
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+R+S+FLLWQ AY+E+ F WPDF+R+ AL Y R RRFGG+
Sbjct: 200 EERISNFLLWQSAYAEYYFTDVLWPDFNRDELHRALAAYQHRQRRFGGV 248
>gi|332186091|ref|ZP_08387837.1| di-trans,poly-cis-decaprenylcistransferase [Sphingomonas sp. S17]
gi|332013906|gb|EGI55965.1| di-trans,poly-cis-decaprenylcistransferase [Sphingomonas sp. S17]
Length = 238
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 99/233 (42%), Positives = 146/233 (62%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ + P H+ IIMDGNGRWA R LPR AGH+ G++ I AA +GI+ LT++AFS
Sbjct: 6 TGAVPRHVAIIMDGNGRWAKRRLLPRFAGHKAGVDAVRRIARAARAMGIEALTLYAFSSE 65
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP +EIS+L+ L++ FL+K L +N+++RVIG+ D++ ++ +A +T
Sbjct: 66 NWRRPETEISDLMGLLRIFLRKDLAELVSDNVRLRVIGDYRRFPADLVAMIDDAIARTSA 125
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTG L IA NY ++ E+ A K + + +G + + + I L T+ +P DL+I
Sbjct: 126 NTGPILAIALNYGAQAELVEAAKRLALKVAAGEMDAEAITPDAIEGELQTNGLPPLDLVI 185
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE+RLS+FLLWQ AY+E +F+ WPDF A+ ++ R RRFGGL
Sbjct: 186 RTSGEQRLSNFLLWQAAYAELLFVDTLWPDFDDAALVDAVAEFGRRHRRFGGL 238
>gi|118474388|ref|YP_891925.1| undecaprenyl diphosphate synthase [Campylobacter fetus subsp. fetus
82-40]
gi|118413614|gb|ABK82034.1| undecaprenyl diphosphate synthase [Campylobacter fetus subsp. fetus
82-40]
Length = 225
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/228 (43%), Positives = 145/228 (63%), Gaps = 7/228 (3%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+H+ IIMDGNGRWA RGL R GH+ G V +IV+ + IKNLT++AFS NW+RP
Sbjct: 5 NHLAIIMDGNGRWAKKRGLVRTNGHQIGANVVEDIVSYCRKNSIKNLTLYAFSTENWKRP 64
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE+ L+ L+K F+K L +NNI+ IGN L++D+ + +++T N+ LN
Sbjct: 65 KSEVDFLMNLLKKFIKLKENMLLENNIRFSTIGNLEPLNEDLKFDILNLKEKTMNNSSLN 124
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L +A NY S+DEI RAIK + +++ + I+K+LDT++ D DL+IRTG E
Sbjct: 125 LILAINYGSKDEIIRAIKKTL-------LYGEEINEASISKHLDTNEFGDVDLLIRTGAE 177
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+RLS+FLLWQ +Y+E F P WPDF+ + + + Y + R+FGGL
Sbjct: 178 QRLSNFLLWQASYAELCFTPTLWPDFNSDELNNIVKNYKNKHRKFGGL 225
>gi|294012398|ref|YP_003545858.1| undecaprenyl pyrophosphate synthetase [Sphingobium japonicum UT26S]
gi|292675728|dbj|BAI97246.1| undecaprenyl pyrophosphate synthetase [Sphingobium japonicum UT26S]
Length = 246
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 99/238 (41%), Positives = 152/238 (63%), Gaps = 4/238 (1%)
Query: 6 MSSSPPDH----IGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
++S PDH + IIMDGNGRWA R LPR AGHR G+E + AA E+G++ LT++
Sbjct: 9 LTSGAPDHGARHVAIIMDGNGRWAKKRFLPRIAGHRAGVEAVRRVARAARELGLECLTLY 68
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP SE+++L+ L++ F++ N +++R+IGN +LD ++ ++ A
Sbjct: 69 AFSSENWKRPASEVTDLMGLLRHFIQSDLDEFHANGVRLRIIGNYRALDPSLVDLIDNAV 128
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T N+G L IA NY ++DE+ R + + + + +G + + ++ + + L T+D+P
Sbjct: 129 ARTAGNSGPILAIALNYGAQDELVRMAQTLARRVAAGEIAAEEIGIADVDAALYTADLPP 188
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DL+IRT GE+RLS+F+LWQ AY+E F WPDF AL+ + LRDRRFGGL
Sbjct: 189 LDLMIRTSGEQRLSNFMLWQAAYAELYFTDILWPDFDGRALAAALDAFRLRDRRFGGL 246
>gi|327488786|gb|EGF20585.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sanguinis
SK1058]
Length = 226
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/226 (44%), Positives = 137/226 (60%), Gaps = 4/226 (1%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA R PR GH+ G+E + AA E+G++ LT++AFS NW RP E+S
Sbjct: 1 MDGNGRWAKKRMQPRVFGHKAGMETLQRVTIAAKEMGVQVLTVYAFSTENWSRPEKEVSF 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
++ L F + L KN +K+++IG+ L L++AE T+LNTGL L A N
Sbjct: 61 IMNLPVEFYDRYVPELHKNKVKIQMIGDTAKLPKATFEALEKAESLTKLNTGLILNFALN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLIIRTGGEKR 193
Y R EI++A+K I QD+ + D+ +I YL TS++P DPDL+IRT GE R
Sbjct: 121 YGGRYEINQAVKLIAQDVLDAKLSPGDITEEVIGNYLYTSNLPKMLRDPDLVIRTSGELR 180
Query: 194 LSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
LS+FL WQ AYSE F WPDF + A+ +Y+ R+RRFGG+
Sbjct: 181 LSNFLPWQSAYSELYFTDILWPDFDEKALKAAIAEYSRRNRRFGGV 226
>gi|313886511|ref|ZP_07820227.1| di-trans,poly-cis-decaprenylcistransferase [Porphyromonas
asaccharolytica PR426713P-I]
gi|312924057|gb|EFR34850.1| di-trans,poly-cis-decaprenylcistransferase [Porphyromonas
asaccharolytica PR426713P-I]
Length = 238
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/234 (43%), Positives = 141/234 (60%), Gaps = 1/234 (0%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
MM P HI IIMDGNGRWA R L R GH++G +V + ++A A+ GI LT++AFS
Sbjct: 1 MMKQQTPQHIAIIMDGNGRWAQRRDLSRSYGHKQGTDVLEKTLSAVADRGIPYLTVYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP SE++ +++L+ L + K +++R IG+ L L+++ +QT
Sbjct: 61 TENWSRPESEVNYIMELLAKALHEYTPRFIKEGVRLRAIGDIDQLPAQTAAQLRDSMEQT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVD-SSLIAKYLDTSDVPDPD 183
+ + L IA +YSS E+S AI++I D++SG + S D+ LI YL TS +P PD
Sbjct: 121 KDGQRITLCIALSYSSYTEVSHAIRHIVADVQSGRLSSDDLSRPELINDYLYTSGMPMPD 180
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
L+IRTGGE+RLS+FLL Q AY+E F WPDF AL Y R RRFG
Sbjct: 181 LLIRTGGEQRLSNFLLLQSAYTELYFTDTLWPDFDEAELDKALADYASRQRRFG 234
>gi|289432267|ref|YP_003462140.1| undecaprenyl diphosphate synthase [Dehalococcoides sp. GT]
gi|288945987|gb|ADC73684.1| undecaprenyl diphosphate synthase [Dehalococcoides sp. GT]
Length = 236
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/238 (42%), Positives = 143/238 (60%), Gaps = 4/238 (1%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ ++++PPDHI IIMDGNGRWA RGL R GH+ G+E ++ + +G+K +T++
Sbjct: 3 TTATINNTPPDHIAIIMDGNGRWAERRGLSRLEGHKAGLENARRVIRHLSSLGVKYVTLY 62
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
+FS NW+RP +EI L LI + L NNI++R +G+ L + L+
Sbjct: 63 SFSTENWKRPDAEIKGLFGLINDVMSSYIPELAGNNIRLRHLGHLDKLPAMLKHKLESLL 122
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T NTGL L +AF+Y RDEI +A+K + +D + + L A YL T+ +P+
Sbjct: 123 SETSQNTGLTLSLAFDYGGRDEIIQAVKKLVKD----GIEPDKISEELFAGYLFTTGIPE 178
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
LIIRTGGE RLS+FLLWQ AYSE F WPDF + A++ +N R RRFGGL
Sbjct: 179 AGLIIRTGGEIRLSNFLLWQSAYSELYFSEVMWPDFGEKEIDRAISAFNQRQRRFGGL 236
>gi|258627354|ref|ZP_05722138.1| Undecaprenyl diphosphate synthase [Vibrio mimicus VM603]
gi|258580392|gb|EEW05357.1| Undecaprenyl diphosphate synthase [Vibrio mimicus VM603]
Length = 250
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 88/227 (38%), Positives = 143/227 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA A+G PR GH+ G+ + ++ +A +G+K +T+FAFS NWRR
Sbjct: 12 PKHIAVIMDGNGRWAKAQGKPRVFGHKNGVAAVRKTISTSARLGVKAVTLFAFSSENWRR 71
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L + L L KNN+++RVIG++ + + + +AE T NTG+
Sbjct: 72 PEEEVGVLMELFITVLSTEIKKLHKNNLRLRVIGDKSRFSERLQSKIAQAEALTASNTGM 131
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ A NY + +I +A + + + + G + ++D ++I ++L +D+P+ DL+IRT G
Sbjct: 132 VVNTAANYGGKWDILQATQALAEKVAQGDLLPAEIDEAMIKQHLTMADLPEVDLLIRTSG 191
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+F+LWQ+AY+E F P +WP+F A+ + R+RRFG
Sbjct: 192 ECRISNFMLWQLAYAEMYFTPVFWPEFDENCLIEAVTWFVNRERRFG 238
>gi|332300352|ref|YP_004442273.1| Undecaprenyl pyrophosphate synthase [Porphyromonas asaccharolytica
DSM 20707]
gi|332177415|gb|AEE13105.1| Undecaprenyl pyrophosphate synthase [Porphyromonas asaccharolytica
DSM 20707]
Length = 238
Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/234 (43%), Positives = 141/234 (60%), Gaps = 1/234 (0%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
MM P HI IIMDGNGRWA R L R GH++G +V + ++A A+ GI LT++AFS
Sbjct: 1 MMKQQTPQHIAIIMDGNGRWAQRRDLSRSYGHKQGTDVLEKTLSAVADRGIPYLTVYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP SE++ +++L+ L + K +++R IG+ L L+++ +QT
Sbjct: 61 TENWSRPESEVNYIMQLLAEGLHEYTPRFIKEGVRLRAIGDIDQLPAQTAAQLRDSMEQT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVD-SSLIAKYLDTSDVPDPD 183
+ + L IA +YSS E+S AI++I D++SG + S D+ LI YL TS +P PD
Sbjct: 121 KDGQRITLCIALSYSSYTEVSHAIRHIVADVQSGRLSSDDLSRPELINDYLYTSGMPMPD 180
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
L+IRTGGE+RLS+FLL Q AY+E F WPDF AL Y R RRFG
Sbjct: 181 LLIRTGGEQRLSNFLLLQSAYTELYFTDTLWPDFDEAELDKALADYASRQRRFG 234
>gi|299067463|emb|CBJ38662.1| undecaprenyl pyrophosphate synthetase (di-trans,
poly-cis-decaprenylcistransferase) [Ralstonia
solanacearum CMR15]
Length = 258
Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 97/236 (41%), Positives = 141/236 (59%), Gaps = 2/236 (0%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
++ P H+ IIMDGNGRWA R LPR AGH +G++ +V AA G++ LT+FAFS
Sbjct: 12 TADTPHHVAIIMDGNGRWATERHLPRMAGHSRGLDAVRAVVQAADRRGVRYLTLFAFSSE 71
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP EIS L+KL + L++ L + I++RV+G+ + I +++EAE +T
Sbjct: 72 NWRRPAEEISFLMKLFMTALRREVSKLNDSGIRLRVVGDLNAFSPRIQLMIREAEAKTAA 131
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N GL + IA NY R +I +A++ + D + + ++ Y+ + +PDL I
Sbjct: 132 NPGLTVTIAANYGGRWDILQAMRALVAD--QPDIAPEAITEEALSPYMALAYASEPDLFI 189
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE+R+S+F+LWQ+AYSE F YWPDF A Y R+RRFG S +
Sbjct: 190 RTGGEQRISNFMLWQLAYSELYFTERYWPDFDAAEMDRAFAWYRNRERRFGRTSAQ 245
>gi|15598848|ref|NP_252342.1| undecaprenyl pyrophosphate synthetase [Pseudomonas aeruginosa PAO1]
gi|152987147|ref|YP_001346871.1| undecaprenyl pyrophosphate synthetase [Pseudomonas aeruginosa PA7]
gi|218890123|ref|YP_002438987.1| undecaprenyl pyrophosphate synthetase [Pseudomonas aeruginosa
LESB58]
gi|254236566|ref|ZP_04929889.1| undecaprenyl pyrophosphate synthetase [Pseudomonas aeruginosa
C3719]
gi|254242349|ref|ZP_04935671.1| undecaprenyl pyrophosphate synthetase [Pseudomonas aeruginosa 2192]
gi|42559882|sp|Q9HXY2|UPPS_PSEAE RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|9949813|gb|AAG07040.1|AE004785_4 undecaprenyl pyrophosphate synthetase [Pseudomonas aeruginosa PAO1]
gi|126168497|gb|EAZ54008.1| undecaprenyl pyrophosphate synthetase [Pseudomonas aeruginosa
C3719]
gi|126195727|gb|EAZ59790.1| undecaprenyl pyrophosphate synthetase [Pseudomonas aeruginosa 2192]
gi|150962305|gb|ABR84330.1| di-trans,poly-cis-decaprenylcistransferase [Pseudomonas aeruginosa
PA7]
gi|218770346|emb|CAW26111.1| undecaprenyl pyrophosphate synthetase [Pseudomonas aeruginosa
LESB58]
Length = 251
Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 94/232 (40%), Positives = 142/232 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGN RWA R LP AGH+ G++ ++ AE G++ LT+FAFS NW+R
Sbjct: 11 PRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAEAGVEVLTLFAFSSENWQR 70
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L L++ L +N I++R+IG+R ++ ++EAE T NT
Sbjct: 71 PADEVSALMELFLVALRREVRKLDENGIRLRIIGDRTRFHPELQAAMREAEAATAGNTRF 130
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY + +I +A + + ++++ G + + D+ + L+ L T D P PDL IRTGG
Sbjct: 131 LLQVAANYGGQWDIVQAAQRLAREVQGGHLAADDISAELLQGCLVTGDQPLPDLCIRTGG 190
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AY+E F +WPDF AL ++ R RRFG S++
Sbjct: 191 EHRISNFLLWQLAYAELYFSDLFWPDFKHAAMRAALADFSKRQRRFGKTSEQ 242
>gi|297248469|ref|ZP_06932187.1| di-trans,poly-cis-decaprenylcistransferase [Brucella abortus bv. 5
str. B3196]
gi|297175638|gb|EFH34985.1| di-trans,poly-cis-decaprenylcistransferase [Brucella abortus bv. 5
str. B3196]
Length = 215
Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 94/195 (48%), Positives = 132/195 (67%)
Query: 49 AAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS 108
AA + G+ LT+FAFS NW RP E+S+L+ L+K F+++ L +NN++V +IG R
Sbjct: 3 AAGDRGLGYLTLFAFSSENWTRPSGEVSDLLGLLKLFIRRDLAELHRNNVRVNIIGERAE 62
Query: 109 LDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSS 168
L +I +L EAE T NTGLNL IAFNY SRDEI RA++++ +D+ +G + + +
Sbjct: 63 LAANIRALLNEAESLTHRNTGLNLVIAFNYGSRDEIVRAVRSLARDVAAGLLDPSSISAE 122
Query: 169 LIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQ 228
L++ LDT+ +PDPDLIIRT GE RLS+FLLWQ AYSEF+F+P +WPDF A
Sbjct: 123 LVSANLDTAGIPDPDLIIRTSGEMRLSNFLLWQAAYSEFLFLPCHWPDFRPADLDAAYET 182
Query: 229 YNLRDRRFGGLSKKG 243
+ R+RRFGG+ +
Sbjct: 183 FRQRERRFGGVEPRA 197
>gi|257058043|ref|YP_003135931.1| undecaprenyl pyrophosphate synthase [Cyanothece sp. PCC 8802]
gi|256588209|gb|ACU99095.1| undecaprenyl diphosphate synthase [Cyanothece sp. PCC 8802]
Length = 249
Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 90/227 (39%), Positives = 137/227 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ +IMDGNGRWA RGLPR GH++G++ +++ + G+ LT +AFS NW R
Sbjct: 21 PNHVAVIMDGNGRWAKRRGLPRIMGHQRGVDTLKDLLRCCKDWGVPALTAYAFSTENWGR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P+ E+ L+ L + L++ + + N+++R +GN L + + + T+ NTG+
Sbjct: 81 PLDEVEFLMTLFERVLRRELREMMEENVRIRFVGNLAVLPPSLQEEIARSMQDTQNNTGI 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ +A NY R EI +A + I ++ G + D+D S+ +L T + PDL+IRT G
Sbjct: 141 DFTVATNYGGRQEIVQACQAIATQVQQGLLNPEDIDESVFEGHLYTKGIAHPDLLIRTSG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E RLS+FLLWQ+AY+E WPDF+RE F AL Y R+RRFG
Sbjct: 201 EMRLSNFLLWQLAYAEIYVTQTLWPDFNREEFHQALLAYQQRERRFG 247
>gi|312196055|ref|YP_004016116.1| undecaprenyl diphosphate synthase [Frankia sp. EuI1c]
gi|311227391|gb|ADP80246.1| undecaprenyl diphosphate synthase [Frankia sp. EuI1c]
Length = 264
Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 93/229 (40%), Positives = 138/229 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I+MDGNGRWA RGLPR GH G + + V A E+GI+ ++++AFS NW+R
Sbjct: 32 PQHVAIVMDGNGRWATLRGLPRTKGHEAGEDALFDCVEGAIELGIRWISVYAFSTENWKR 91
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E++ L++ + + + + VR G R L + ++ L++AE++T+ N +
Sbjct: 92 APDEVAFLMRFVDGVFGRRIDDMDSLGVNVRWAGRRPRLWNSVIRRLEKAEERTKNNDRI 151
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R EI+ A + QD+ G + +D A+YLD D+PD DL+IRT G
Sbjct: 152 TLAMCINYGGRAEIADAAALMAQDVRDGRLKPDKIDERTFARYLDEPDMPDVDLLIRTSG 211
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+RLS+FLLWQ AY+EF F+ WPDF R + A +Y RDRR+GG+
Sbjct: 212 EQRLSNFLLWQAAYAEFAFVDTLWPDFDRRDLWAACEEYARRDRRYGGV 260
>gi|320102516|ref|YP_004178107.1| Undecaprenyl pyrophosphate synthetase [Isosphaera pallida ATCC
43644]
gi|319749798|gb|ADV61558.1| Undecaprenyl pyrophosphate synthetase [Isosphaera pallida ATCC
43644]
Length = 305
Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 95/232 (40%), Positives = 134/232 (57%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P HI IIMDGNGRWA RGLPR GHR+G+ +V +G+ LT++ S+ N
Sbjct: 18 SQLPRHIAIIMDGNGRWAQRRGLPRVMGHRRGVASVRAVVEEGCRLGLDQLTLYCLSVEN 77
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W+RP E+ L+KL + FL L + I++ +IG+R L +L L + + T N
Sbjct: 78 WKRPAREVQALMKLFRRFLITEREELARQRIRLTMIGDRQGLPSAVLDELDKTLELTAAN 137
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
GL L +A NY R EI A + + + +E G + ++D++ L T + DPDL+IR
Sbjct: 138 EGLTLCLAVNYGGRQEIVEAARRLARAVEQGRLAPEEIDAAQFEGQLFTRGMRDPDLLIR 197
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
T GE R+S+FLLWQ++Y+E P WPDF + AL Y R R+FGGL
Sbjct: 198 TAGEMRVSNFLLWQMSYAELHVTPTLWPDFRADDLDRALVDYARRQRKFGGL 249
>gi|146308070|ref|YP_001188535.1| undecaprenyl pyrophosphate synthetase [Pseudomonas mendocina ymp]
gi|145576271|gb|ABP85803.1| Undecaprenyl pyrophosphate synthetase [Pseudomonas mendocina ymp]
Length = 248
Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/232 (41%), Positives = 140/232 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGN RWA R LP AGH+ G++ ++ AE G++ LT+FAFS NW+R
Sbjct: 10 PRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAESGVEVLTLFAFSSENWQR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L L++ L N+I +R+IG+R ++ ++EAE T N
Sbjct: 70 PAEEVGALMELFLGALRREAKKLLDNDIGLRIIGDRSRFHPELQAAMREAELLTAGNRRF 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY + +I++A + + +++++G + D+ L+ L T D+P PDL IRTGG
Sbjct: 130 TLQIAANYGGQWDIAQAAQRLAREVQAGHLQPEDITPGLLQGCLATGDLPLPDLCIRTGG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AYSE F YWPDF E AL + R RRFG S++
Sbjct: 190 EHRISNFLLWQLAYSELYFSDLYWPDFKHEAMRKALADFATRQRRFGKTSEQ 241
>gi|168012250|ref|XP_001758815.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689952|gb|EDQ76321.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 247
Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/234 (43%), Positives = 140/234 (59%), Gaps = 3/234 (1%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+S P H+ IIMDGN RWA RG+P GH G+ E+V A G++ LT+FAFS
Sbjct: 11 ASVMPKHVAIIMDGNSRWAERRGMPASMGHEAGVRSLKEVVKLAHTWGVEVLTVFAFSTE 70
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP E+ L+ L ++ LK SL K N++V +G+ L + ++ ED T+
Sbjct: 71 NWLRPKMEVDFLMMLFENVLKNELSSLAKENVRVHCMGDLTLLPVTLRDMVTTIEDHTKH 130
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS---DVPDPD 183
NTGL IA +YS R +I+ A + + +E+G + S D+ + I + L TS DV +PD
Sbjct: 131 NTGLKFCIALSYSGRYDIANACQRLAARVETGELSSSDITEASIEEELKTSWLGDVRNPD 190
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
L+IRT GE+RLS+FLLWQ AY+EF F+ WPDF F AL Y R+RRFG
Sbjct: 191 LLIRTSGEQRLSNFLLWQTAYTEFYFVDILWPDFGVVQFREALLAYQNRNRRFG 244
>gi|282900561|ref|ZP_06308503.1| Di-trans-poly-cis-decaprenylcistransferase [Cylindrospermopsis
raciborskii CS-505]
gi|281194361|gb|EFA69316.1| Di-trans-poly-cis-decaprenylcistransferase [Cylindrospermopsis
raciborskii CS-505]
Length = 249
Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 90/229 (39%), Positives = 136/229 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA +GLPR GH++G++ ++ + GI+ LT +AFS NW R
Sbjct: 21 PKHVAVIMDGNGRWAKGQGLPRIMGHKQGVDALKNLLRCCKDWGIQALTAYAFSTENWNR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L + L++ + + N++++ +GN +L + + + QTR N +
Sbjct: 81 PHEEVEFLMTLFQGVLRQELREMVEENVEIQFVGNLQALPVALQREISHSMAQTRGNQSI 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY R EI +A + I Q ++ G + ++ L A +L T+ + DPDL+IRT G
Sbjct: 141 KFTVATNYGGRQEIVQACQAIAQKVKEGLLNPEEISEELFAGHLYTAGITDPDLLIRTSG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+FLLWQ+AY+E WPDF R F AL Y R+RRFGG+
Sbjct: 201 EMRLSNFLLWQMAYAEIYITDTLWPDFDRNQFHQALRAYQQRERRFGGV 249
>gi|288801911|ref|ZP_06407353.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella
melaninogenica D18]
gi|288335953|gb|EFC74386.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella
melaninogenica D18]
Length = 250
Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 93/235 (39%), Positives = 145/235 (61%), Gaps = 5/235 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI I MDGNGRWA R PR GH+ G++ I + +G+K LT++ FS NW R
Sbjct: 11 PQHIAITMDGNGRWATERNKPRSYGHQAGVDTVRRITSECVRLGVKFLTLYTFSTENWNR 70
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EI+ L+ L+ + L+ + KNN++ RVIG+ L +++ L E E+ T N+ +
Sbjct: 71 PTDEIAALMGLVLTSLEDEIFV--KNNVRFRVIGDMARLPEEVQKKLCETEEHTAKNSAM 128
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGS---VCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+ +A +YS+R EI++A++ I + ++ S + + +I+++L+T+ +PDPDL+IR
Sbjct: 129 TMVVALSYSARWEIAKAMREIVAEHQANSSEPLRPETITEEVISEHLETNFMPDPDLLIR 188
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE R+S++LLWQ+AYSE F YWPDF + A+ + R RRFG K+
Sbjct: 189 TGGELRISNYLLWQIAYSELYFCDTYWPDFDEQDLQKAIVSFQSRQRRFGKTEKQ 243
>gi|53711796|ref|YP_097788.1| undecaprenyl pyrophosphate synthase [Bacteroides fragilis YCH46]
gi|60680027|ref|YP_210171.1| undecaprenyl pyrophosphate synthase [Bacteroides fragilis NCTC
9343]
gi|253564136|ref|ZP_04841593.1| undecaprenyl pyrophosphate synthetase [Bacteroides sp. 3_2_5]
gi|265765177|ref|ZP_06093452.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides sp. 2_1_16]
gi|52214661|dbj|BAD47254.1| undecaprenyl pyrophosphate synthetase [Bacteroides fragilis YCH46]
gi|60491461|emb|CAH06211.1| putative undecaprenyl pyrophosphate synthetase [Bacteroides
fragilis NCTC 9343]
gi|251947912|gb|EES88194.1| undecaprenyl pyrophosphate synthetase [Bacteroides sp. 3_2_5]
gi|263254561|gb|EEZ25995.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides sp. 2_1_16]
gi|301161568|emb|CBW21108.1| putative undecaprenyl pyrophosphate synthetase [Bacteroides
fragilis 638R]
Length = 244
Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 99/232 (42%), Positives = 142/232 (61%), Gaps = 2/232 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG R GH+ G E + I AA +GIK LT++ FS NW R
Sbjct: 13 PKHVAIIMDGNGRWAKLRGHERSFGHQAGAETVHIITEEAARLGIKFLTLYTFSTENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L+ +++ + KNNI R+IG+ L +++ L + T NTG+
Sbjct: 73 PSDEVAALMSLLFDSIEEE--TFMKNNISFRIIGDINKLPENVRERLNACVEHTSKNTGM 130
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +YS+R EI+ A + I +++G + ++ S I +L T+ +PDPDL+IRTGG
Sbjct: 131 CLILALSYSARWEITEATRQIATLVQNGEMNPEEITSESIRTHLTTNFMPDPDLLIRTGG 190
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E RLS++LLWQ AYSE F +WPDF E A+ Y R+RRFG S++
Sbjct: 191 EVRLSNYLLWQCAYSELYFCETFWPDFKEEELCKAICDYQKRERRFGKTSEQ 242
>gi|91202465|emb|CAJ72104.1| strongly similar to undecaprenyl diphosphate synthase [Candidatus
Kuenenia stuttgartiensis]
Length = 238
Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 99/235 (42%), Positives = 143/235 (60%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ S P+HI IIMDGNGRWA + L R GH G + EI A+ IK LT++AFS
Sbjct: 4 NGSLPEHIAIIMDGNGRWARQKKLLRIKGHETGAKAVREITRECAKKHIKQLTLYAFSQE 63
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW+RP EI L+KL+K+FL ++KNNI++ IG L + + L + +++++
Sbjct: 64 NWKRPKREIDLLMKLLKNFLIGEREEIQKNNIRLTAIGRIKELPEFVQRELSISIEESKM 123
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTG+ L +A NY R EI A K I +++ G + ++ KYL ++PDPDL+I
Sbjct: 124 NTGMVLCLALNYGGRTEIIDATKKIVAELKKGKLKIDEITEESFKKYLYMPNMPDPDLLI 183
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
RTGGE R+S+FLLW+++Y+E YWPDF + AL Y R+RR+GGL +
Sbjct: 184 RTGGEMRISNFLLWEISYAELWVTDTYWPDFKKPHLEEALLAYANRERRYGGLKE 238
>gi|293605061|ref|ZP_06687454.1| undecaprenyl diphosphate synthase [Achromobacter piechaudii ATCC
43553]
gi|292816563|gb|EFF75651.1| undecaprenyl diphosphate synthase [Achromobacter piechaudii ATCC
43553]
Length = 254
Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 94/232 (40%), Positives = 140/232 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA R LPR AGH KG++ +V A G++ LT+FAFS NWRR
Sbjct: 16 PEHVAIIMDGNGRWATRRLLPRTAGHAKGVQAVRRVVEACGRAGVRYLTLFAFSSENWRR 75
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L L++ L + +++ VIG+ + + + +++ A+ +T N L
Sbjct: 76 PAEEVSLLMRLFVQALEREIGKLDEQGVRLHVIGDLSAFEPRLQELIQAAQARTAHNDRL 135
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L +A NY R +I +A + + + VD +A++L S P+PDL IRTGG
Sbjct: 136 HLTVAANYGGRWDILQATRAMLAAEPDLAAHPERVDEERLARHLSMSWAPEPDLFIRTGG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FL+WQ+AY+EF F YWPDF A + Y R+RRFG S +
Sbjct: 196 EQRISNFLIWQMAYAEFYFTDRYWPDFGAAELQAAFDWYRTRERRFGRTSAQ 247
>gi|294084084|ref|YP_003550842.1| di-trans-poly-cis-decaprenylcistransferase [Candidatus
Puniceispirillum marinum IMCC1322]
gi|292663657|gb|ADE38758.1| Di-trans-poly-cis-decaprenylcistransferase [Candidatus
Puniceispirillum marinum IMCC1322]
Length = 249
Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/228 (42%), Positives = 143/228 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H IIMDGN RWA RGL GH +G E ++ AA + I+ LT FAFS NW R
Sbjct: 5 PHHTAIIMDGNRRWAKGRGLDIIRGHNQGAESLKDVCRAAPQGQIRWLTAFAFSAQNWSR 64
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+KL++ FL + L NNI++RVIGNR + D+ ++ ++E T NTGL
Sbjct: 65 PEPEVSGLLKLMRLFLMREIEELIHNNIRLRVIGNRGNFSTDLQQLISKSETLTAENTGL 124
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL IA ++ + +I++A + I +++ +G + V++ + L T+ +P DL+IRTGG
Sbjct: 125 NLTIALDFGGQQDITQATRQIAEEVAAGVIDPKLVNNDFLKSRLQTAVLPPVDLLIRTGG 184
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
EKR+S+FLLW ++Y+E F YWPDF A+ ++N R+RRFGG
Sbjct: 185 EKRISNFLLWDLSYAELYFSDTYWPDFKASDLEVAITEFNNRERRFGG 232
>gi|260575885|ref|ZP_05843880.1| undecaprenyl diphosphate synthase [Rhodobacter sp. SW2]
gi|259021811|gb|EEW25112.1| undecaprenyl diphosphate synthase [Rhodobacter sp. SW2]
Length = 253
Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 133/226 (58%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
DH+ IIMDGNGRWA RG PR GHRKG E +IV A ++GI LT++AFS NW+R
Sbjct: 23 DHVAIIMDGNGRWATERGWPRLVGHRKGAERVKQIVRCAPDLGISWLTLYAFSTENWKRS 82
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E+ L+ + ++++ L +++R IG+R LD + ++ E +T LN
Sbjct: 83 TEEVLGLMSIFARYIEREADRLAAEGVRMRFIGDRSRLDPKLRSLMAGIETRTAPLKRLN 142
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L IA NY RDE+ RA + D+ +G + DVD + + LDT+ +PDPDL+IRT GE
Sbjct: 143 LTIAINYGGRDELVRAAARLALDVAAGRLHPDDVDEAELTARLDTAGIPDPDLVIRTSGE 202
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
R S+FL WQ AY+E+ F WPDF + + R+RRFG
Sbjct: 203 TRTSNFLPWQAAYAEYEFTQTMWPDFLPAELARIVGSFGQRERRFG 248
>gi|253700114|ref|YP_003021303.1| undecaprenyl pyrophosphate synthase [Geobacter sp. M21]
gi|251774964|gb|ACT17545.1| undecaprenyl diphosphate synthase [Geobacter sp. M21]
Length = 249
Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 99/239 (41%), Positives = 143/239 (59%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S+ + P H+ +IMDGNGRWA R L R GH+KG+E IV + +GI LT+FAF
Sbjct: 3 SLERKNLPMHLAVIMDGNGRWAKQRMLRRIVGHQKGVETVRVIVEECSRLGIGYLTLFAF 62
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP +E+ L+ L+K +++ + +N+I+ VIGNR L DD+ ++ A ++
Sbjct: 63 SAENWLRPKTEVKALMALLKQYIRGETARMMQNDIRFNVIGNRADLPDDVNREIESAIEK 122
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T N G+ L +A +Y SR EI A K + D +G + +D + L T+ +PDPD
Sbjct: 123 TAGNRGMLLTLALSYGSRQEIVAAAKKLAIDAAAGRLDPETIDEGSLTGSLFTAGIPDPD 182
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRT GE R+S+FLLWQ+AY+E F WPDF R A + R+RRFG S++
Sbjct: 183 LLIRTSGEMRISNFLLWQLAYAELYFTDVNWPDFDRNELARAFRDFQSRERRFGMTSEQ 241
>gi|317406264|gb|EFV86508.1| undecaprenyl pyrophosphate synthetase [Achromobacter xylosoxidans
C54]
Length = 254
Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 94/232 (40%), Positives = 142/232 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA R LPR AGH KG++ +V A G++ LT+FAFS NWRR
Sbjct: 16 PEHVAIIMDGNGRWATRRLLPRTAGHAKGVQAVRRVVEACGRAGVRYLTLFAFSSENWRR 75
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L L++ L++ +++ VIG+ + + + ++ A+ +T N L
Sbjct: 76 PAEEVSLLMRLFVQALEREVGKLEEQGVRLHVIGDLSAFEPRLQELIFAAQARTAHNDRL 135
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L +A NY R +I +A + + + + VD +A++L S P+PDL IRTGG
Sbjct: 136 HLTVAANYGGRWDILQATRAMLAAEPALATQPELVDEERLARHLSMSWAPEPDLFIRTGG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FL+WQ+AY+EF F YWPDF + A + Y R+RRFG S +
Sbjct: 196 EQRISNFLIWQMAYAEFYFTDRYWPDFGADELREAFDWYRTRERRFGRTSAQ 247
>gi|168039317|ref|XP_001772144.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676475|gb|EDQ62957.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 256
Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/233 (42%), Positives = 143/233 (61%), Gaps = 3/233 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S+ P H+ IIMDGN RWA RGLP GH G+ E+V A GIK LT+FAFS N
Sbjct: 21 SALPKHVAIIMDGNSRWAERRGLPASMGHEAGVRSLKEVVKLAHTWGIKVLTVFAFSTEN 80
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP +E+ L+ L ++ LK L K N++V +G+ SL + + ++ +++T+ N
Sbjct: 81 WLRPKTEVDFLMLLFENVLKNELSILAKENVRVHCMGDLRSLPESLRNMVSTLDERTKHN 140
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS---DVPDPDL 184
TGL IA +YS R +I+ A + + +E+G + S D++ ++I + + TS + +PDL
Sbjct: 141 TGLKFCIALSYSGRYDITNACQRLAAKVEAGEMSSSDINEAVIDEEMKTSWLGEARNPDL 200
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+IRT GE+RLS+FLLWQ+AYSE F+ WPDF F AL Y R RRFG
Sbjct: 201 LIRTSGEQRLSNFLLWQIAYSELYFVDSLWPDFGFVQFKEALLAYQNRSRRFG 253
>gi|124515078|gb|EAY56589.1| Undecaprenyl diphosphate synthase [Leptospirillum rubarum]
Length = 264
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 91/229 (39%), Positives = 138/229 (60%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+PP H+ IIMDGNGRWA R +PR GHR G IV A I LT++AFS NW
Sbjct: 25 NPPRHVAIIMDGNGRWARKRHMPRIVGHRAGATAVRTIVTATRSWDIPYLTLYAFSWENW 84
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+ L+ L++ ++ + ++ + I+ V+G+R L + + AE +T+ N
Sbjct: 85 SRPRQEVDALMGLLEEYIDREIRTMMEREIRFFVVGDRARLPSPVRSKIAWAERETKDNG 144
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+ L +A +YS R+EI RA++ + +D+ + + ++ ++YL+TS +P PDL+IRT
Sbjct: 145 RMVLTLALSYSGREEIVRAVQRLAEDVRKERLAPDQISETVFSQYLETSILPPPDLLIRT 204
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
GE R+S+FLLWQ+AY+E F P WPDF + F A+ + R RRFG
Sbjct: 205 SGEVRISNFLLWQLAYTEMYFTPTLWPDFGEDDFRQAIEDFQERRRRFG 253
>gi|281356713|ref|ZP_06243204.1| undecaprenyl diphosphate synthase [Victivallis vadensis ATCC
BAA-548]
gi|281316840|gb|EFB00863.1| undecaprenyl diphosphate synthase [Victivallis vadensis ATCC
BAA-548]
Length = 235
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/226 (43%), Positives = 132/226 (58%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA RGLP+ GHR+G E++ AA E G++ LT++AFS NW+RPV
Sbjct: 8 HVAIIMDGNGRWAERRGLPKVEGHRQGARQVTEVLKAAQEYGVEFLTLYAFSTENWKRPV 67
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+E++ L+ L++ F+ L KN I++R IG L L A + T N G L
Sbjct: 68 AEVTALMGLLEEFIDDKLPELMKNGIRLRTIGRTEDLFPGARKKLLHAIEMTEKNNGGTL 127
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A NY R EI A+ + ++ V YL SD+PDPDL+IRT GE
Sbjct: 128 NLALNYGGRAEIVDAVNKMAAEMTEKGGRFPKVTEESFRNYLYASDIPDPDLLIRTSGEL 187
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
RLS+FLLW+++YSE WPDF ++ F AL Y RDRRFGG
Sbjct: 188 RLSNFLLWELSYSEMYVTDTLWPDFGKKEFGEALEAYGQRDRRFGG 233
>gi|317125250|ref|YP_004099362.1| undecaprenyl pyrophosphate synthetase [Intrasporangium calvum DSM
43043]
gi|315589338|gb|ADU48635.1| Undecaprenyl pyrophosphate synthetase [Intrasporangium calvum DSM
43043]
Length = 257
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 94/235 (40%), Positives = 143/235 (60%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S+ +++ P H+ I+MDGNGRWA ARGLPR GH G ++VA A EVG+ +L+ +AF
Sbjct: 15 SIPAAALPKHVAIVMDGNGRWANARGLPRTKGHEAGEASLLDVVAGAIEVGVTHLSAYAF 74
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRR E+ L+ + +++ L + +++R +G L ++ L+ A++
Sbjct: 75 STENWRRSPDEVRFLMGFNRDVIRRRRDQLHEWGVRMRWVGRSPRLWRSVIKELEVAQEL 134
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NTGL L+ NY R E++ A++ I +D +G + VD I +YLD +PD D
Sbjct: 135 TKDNTGLTLYFCVNYGGRAELADAVRRIAEDARAGRLRPSSVDERTITRYLDEPSMPDVD 194
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R+ GE+R S+FLLWQ AY+E VF WPD+ R + A+ +Y RDRR+GG
Sbjct: 195 LFVRSSGEQRTSNFLLWQSAYAEMVFQNRLWPDYDRRDLWAAIEEYVARDRRYGG 249
>gi|114331997|ref|YP_748219.1| undecaprenyl diphosphate synthase [Nitrosomonas eutropha C91]
gi|114309011|gb|ABI60254.1| Undecaprenyl pyrophosphate synthetase [Nitrosomonas eutropha C91]
Length = 263
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/232 (42%), Positives = 141/232 (60%), Gaps = 3/232 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH +G+E + A E G+ LT+FAFS NWRR
Sbjct: 18 PKHIAIIMDGNGRWAKQRYLPRIAGHTQGVEAVRGTIKACIERGVPYLTVFAFSSENWRR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L + L++ SL +N ++ RVIG+ D ++ ++ E T NT L
Sbjct: 78 PAEEVKLLMQLFLAALEREVTSLHENGVRFRVIGDLSKFDPRVIECVRHGEMLTAGNTRL 137
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ +A NY R +I +A++ + I S + D + S +++YL +D P+PDL IRTGG
Sbjct: 138 HFTVAANYGGRWDIMQAVRKM---IAQRSDSTMDFNESDLSRYLTMADAPEPDLFIRTGG 194
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AY+E F WPDF+ A+ Y R+RRFG S++
Sbjct: 195 ECRISNFLLWQLAYTELYFTDTLWPDFNVSTLDKAILSYQKRERRFGQTSEQ 246
>gi|188994162|ref|YP_001928414.1| putative undecaprenyl diphosphate synthase [Porphyromonas
gingivalis ATCC 33277]
gi|188593842|dbj|BAG32817.1| putative undecaprenyl diphosphate synthase [Porphyromonas
gingivalis ATCC 33277]
Length = 254
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 144/232 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI ++MDGNGRWA RG RC GH G++ + AAA G++ LT + FS NW R
Sbjct: 15 PRHIALVMDGNGRWAKIRGKERCEGHAAGVDALRVALRAAAGCGVEYLTAYTFSTENWNR 74
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L + + L NNI++ IG+ L +D+ L++ +T NTGL
Sbjct: 75 PEEEVRALMGLFVTAIMNEMLDLMTNNIRLLAIGDFSRLPEDVRESLEKGIRETAGNTGL 134
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +YSSR E++ AI+ + + + GSV D++ L++ +L T+ +PDPDL IRTGG
Sbjct: 135 TLVLALSYSSRWEMTDAIRRLARKVRDGSVEPEDINVDLVSDHLSTAGIPDPDLFIRTGG 194
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
EKR+S+FL+WQ+AY+E F WPDF + A+ +Y+ R+RRFG S++
Sbjct: 195 EKRISNFLMWQMAYTELFFTDTLWPDFDADCLKAAIEEYSSRERRFGKTSEQ 246
>gi|86130764|ref|ZP_01049363.1| undecaprenyl pyrophosphate synthetase [Dokdonia donghaensis MED134]
gi|85818175|gb|EAQ39335.1| undecaprenyl pyrophosphate synthetase [Dokdonia donghaensis MED134]
Length = 246
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/241 (42%), Positives = 152/241 (63%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+A + + P H+ IIMDGNGRWA +GL R GH+KG + E V AAAE+GI +LT++
Sbjct: 4 LAHIDKNKLPQHVAIIMDGNGRWAKKQGLLRAVGHKKGTKAVREAVEAAAELGIPHLTLY 63
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP +E+ L+ L+ S LKK +L+ N++ + IG SL L E
Sbjct: 64 AFSTENWNRPKAEVDTLMNLLVSSLKKEISTLQDNDVALNTIGLTSSLPKKAQRELNEVI 123
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T+ N L L +A +Y SR+E+ + ++ I +++ + ++D S I ++L T D+PD
Sbjct: 124 EKTKDNKRLKLTLALSYGSREELIKTVREISDKVKNNLISPAEIDESCINQHLYTYDIPD 183
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRT GE+R+S+FLLWQ+AY+EF F WPDF +E A+ Y R+RRFG S+
Sbjct: 184 VDLLIRTSGEQRVSNFLLWQIAYAEFYFTEVLWPDFRKEHLHDAIYNYQKRERRFGKTSE 243
Query: 242 K 242
+
Sbjct: 244 Q 244
>gi|319943822|ref|ZP_08018103.1| di-trans,poly-cis-decaprenylcistransferase [Lautropia mirabilis
ATCC 51599]
gi|319743055|gb|EFV95461.1| di-trans,poly-cis-decaprenylcistransferase [Lautropia mirabilis
ATCC 51599]
Length = 256
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/236 (41%), Positives = 144/236 (61%), Gaps = 1/236 (0%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
++ S P HI +I+DGNGRWA R LPR AGHRKG+E V A G++ LT+FAFS
Sbjct: 12 VAGSVPRHIAVILDGNGRWATRRHLPRAAGHRKGVEAVRTTVEGCARRGVEFLTLFAFSS 71
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NWRRP E+S L++L S L++ L +N I++R++G+ + + ++ +AE +T
Sbjct: 72 ENWRRPADEVSLLMRLFLSALQREVALLDRNGIRLRIVGDLARFEPRLQKMIADAEARTA 131
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQD-IESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NT + L IA NY R +I +A + ++ G V + +A +L + P+PDL
Sbjct: 132 QNTRMTLTIAANYGGRWDILQAGNALLRERAAKGVPADQPVTEAELASHLSLAYAPEPDL 191
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IRTGGE+R+S+FLLWQ+AY+E F +WP+F+ E A+ Y R+RRFG S
Sbjct: 192 FIRTGGEQRISNFLLWQLAYTELYFCECFWPEFNDERLQEAIQWYGQRERRFGRTS 247
>gi|56751258|ref|YP_171959.1| undecaprenyl pyrophosphate synthase [Synechococcus elongatus PCC
6301]
gi|81299075|ref|YP_399283.1| undecaprenyl pyrophosphate synthase [Synechococcus elongatus PCC
7942]
gi|56686217|dbj|BAD79439.1| undecaprenyl pyrophosphate synthetase [Synechococcus elongatus PCC
6301]
gi|81167956|gb|ABB56296.1| Undecaprenyl pyrophosphate synthetase [Synechococcus elongatus PCC
7942]
Length = 251
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 93/230 (40%), Positives = 136/230 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA RGLPR GHR+G++ +++ + GI LT +AFS NW R
Sbjct: 22 PSHVAVIMDGNGRWAKQRGLPRIMGHRRGVDSLKQLLRCCDDWGIGALTAYAFSTENWGR 81
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L + L++ L N+++R +G+ +L + + A T N G+
Sbjct: 82 PHEEVDFLMTLFERVLRRELQELMAENVRIRFVGDLENLPTSLQREIDRATSATAQNDGI 141
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY R E+ +A + I ++ G + +D SL++ +L T+ V DPDL+IRT G
Sbjct: 142 RFTVATNYGGRQELLKACREIAAQVQQGQLAIDAIDESLLSSHLYTAGVTDPDLLIRTSG 201
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
EKRLS+FLLWQ+AY+E WPDF R F+ AL + R RRFG L+
Sbjct: 202 EKRLSNFLLWQLAYAEIYVTDTLWPDFDRYEFYLALRDFQSRQRRFGRLT 251
>gi|255038133|ref|YP_003088754.1| undecaprenyl diphosphate synthase [Dyadobacter fermentans DSM
18053]
gi|254950889|gb|ACT95589.1| undecaprenyl diphosphate synthase [Dyadobacter fermentans DSM
18053]
Length = 250
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 94/228 (41%), Positives = 142/228 (62%), Gaps = 1/228 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA +G R GHR I+ E+ AE+G+ LT++AFS NW R
Sbjct: 11 PKHIAVIMDGNGRWAQNQGAARVFGHRNAIKAVREVTEGCAELGVSFLTLYAFSTENWAR 70
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L+ + ++ KNN+K+ IG+ SL L +A +TR NTGL
Sbjct: 71 PEFEVRALMELLVQSIGNELPTMMKNNVKLDTIGDTASLPRSCQNQLAKAIAETRNNTGL 130
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL +A YS + +I++A + + +D+ +G + +++ ++A L T P+ DL++RTGG
Sbjct: 131 NLILALGYSGKWDITQAARKLAEDVRNGVLLPEEINEEMVAGNLSTEHRPEVDLMLRTGG 190
Query: 191 EKRLSDFLLWQVAYSEFVFIPE-YWPDFSRELFFHALNQYNLRDRRFG 237
+ R+S+FLLWQ+AYSE F + +WPDF RE + A+ Y R+RRFG
Sbjct: 191 DHRISNFLLWQLAYSELYFYEDLFWPDFRREHLYEAILSYQNRERRFG 238
>gi|146299451|ref|YP_001194042.1| undecaprenyl diphosphate synthase [Flavobacterium johnsoniae UW101]
gi|146153869|gb|ABQ04723.1| undecaprenyl diphosphate synthase [Flavobacterium johnsoniae UW101]
Length = 246
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/242 (39%), Positives = 150/242 (61%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ S+ S+ P H+ IIMDGNGRWA +G R GH G + + + A++GI+ LT+
Sbjct: 3 LLDSIDQSNLPKHLAIIMDGNGRWAKQQGFLRAFGHENGTKSVKKTITTCAKLGIEYLTL 62
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP E+ L+K++ + LKK +L++NNI++ IGN L L +
Sbjct: 63 YAFSTENWNRPKLEVEALMKILINSLKKELVTLQENNIRLNAIGNLDKLPKTAQKELLDV 122
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
D+T+ NT L L +A +Y SR+E+ A++ I +++ + +D S+I ++L T ++P
Sbjct: 123 IDKTKNNTRLTLTLALSYGSREELVNAVRAISDKVKNNIISIDTIDDSIINEHLYTQNLP 182
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
D DL+IRT GE R+S+FLLWQ+AY+E F WPDF + + A+ Y R+RRFG S
Sbjct: 183 DVDLLIRTSGEHRISNFLLWQIAYAELYFTNVLWPDFKDQDLYEAIISYQKRERRFGKTS 242
Query: 241 KK 242
++
Sbjct: 243 EQ 244
>gi|226227178|ref|YP_002761284.1| undecaprenyl pyrophosphate synthetase [Gemmatimonas aurantiaca
T-27]
gi|226090369|dbj|BAH38814.1| undecaprenyl pyrophosphate synthetase [Gemmatimonas aurantiaca
T-27]
Length = 258
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 141/232 (60%), Gaps = 4/232 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R +PR GHR G++ E+V A E G++ L++FAFS NW+R
Sbjct: 28 PRHIAIIMDGNGRWARERHMPRAFGHRSGMKAVREVVEGALEAGVEWLSLFAFSQENWQR 87
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT-- 128
P +E+S L+ L++ ++ + L + ++V V G+ L ++ +QT
Sbjct: 88 PETEVSALMSLLEEYIAREAAELAQQGVRVYVHGDLSRLTPAAANAVRRVMEQTVTGNRL 147
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GLNLFI +Y R E+ RA + + D+ +G + + + I+ L T+ PDPDL+IRT
Sbjct: 148 GLNLFI--SYGGRAELVRATRQLAADVAAGRLTADAITEDEISARLYTAGCPDPDLLIRT 205
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
GE+RLS+FLLWQVAY+E YWPDF R + A++ + RDRRFG +S
Sbjct: 206 SGEQRLSNFLLWQVAYAELFISSLYWPDFDRHALYGAISDFQRRDRRFGRVS 257
>gi|17546127|ref|NP_519529.1| undecaprenyl pyrophosphate synthetase [Ralstonia solanacearum
GMI1000]
gi|42559849|sp|Q8XZI7|UPPS_RALSO RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|17428423|emb|CAD15110.1| probable undecaprenyl pyrophosphate synthetase (upp
synthetase)(di-trans,poly-cis-decaprenylcistransferase)
(undecaprenyl diphosphate synthase) (uds) protein
[Ralstonia solanacearum GMI1000]
Length = 258
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/236 (41%), Positives = 140/236 (59%), Gaps = 2/236 (0%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
++ P H+ IIMDGNGRWA R LPR AGH +G++ V AA G++ LT+FAFS
Sbjct: 12 TADTPHHVAIIMDGNGRWATERHLPRMAGHSRGLDAVRAAVQAADHRGVRYLTLFAFSSE 71
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP EIS L+KL + L++ L + I++RV+G+ + I +++EAE +T
Sbjct: 72 NWRRPAEEISFLMKLFMTALRREVSKLNDSGIRLRVVGDLSAFSPRIQLMIREAEAKTAT 131
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N GL + IA NY R +I +A++ + D + + ++ Y+ + +PDL I
Sbjct: 132 NPGLTVTIAANYGGRWDILQAMRALVAD--QPDIAPEAITEEALSPYMALAYASEPDLFI 189
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE+R+S+F+LWQ+AYSE F YWPDF A Y R+RRFG S +
Sbjct: 190 RTGGEQRISNFMLWQLAYSELYFTERYWPDFDAAEMDRAFAWYRNRERRFGRTSAQ 245
>gi|251772087|gb|EES52657.1| Undecaprenyl diphosphate synthase [Leptospirillum
ferrodiazotrophum]
Length = 262
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/229 (42%), Positives = 134/229 (58%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
PP H+ IIMDGNGRWA R LPR AGHR+G + V+A GI+ LT++AFS NW+
Sbjct: 18 PPVHLAIIMDGNGRWAKKRFLPRVAGHRQGAQSVRRTVSACRAWGIRYLTLYAFSWENWK 77
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ L+ L++ +L +K+ I+ R IGNR L + ++ E TR
Sbjct: 78 RSRPEVDALMALLEDYLDGEEALMKEKAIRFRTIGNRSRLPLSVAKRIEAVEASTREGKA 137
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
++L +A +YS R+EI A++ +D++ G + YLDT+ +P PDL+IRT
Sbjct: 138 MDLILALSYSGREEILAAVRRFAEDVKRGVAQPDILSEEAFDGYLDTAGIPPPDLLIRTS 197
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GE R+S+FLLWQ+AY+E F P WPDF E AL Y R RRFG
Sbjct: 198 GEHRISNFLLWQIAYTELFFDPVLWPDFGEENLKRALMDYQERQRRFGA 246
>gi|197119125|ref|YP_002139552.1| undecaprenyl pyrophosphate synthase [Geobacter bemidjiensis Bem]
gi|197088485|gb|ACH39756.1| undecaprenyl diphosphate synthase [Geobacter bemidjiensis Bem]
Length = 249
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 140/232 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA R L R GH+KG+E IV + +GI LT+FAFS NW R
Sbjct: 10 PAHLAVIMDGNGRWAKQRMLRRIVGHQKGVETVRVIVEECSRLGIGYLTLFAFSAENWLR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L+ L+K +++ + +N+I+ VIGNR L +D+ ++ A +T N G+
Sbjct: 70 PKTEVKALMALLKQYIRGETARMMQNDIRFNVIGNRCDLPEDVNREIESAIQKTAGNRGM 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y SR EI A K + +D +G + +D + L T+ +PDPDL+IRT G
Sbjct: 130 LLTLALSYGSRQEIVAAAKRLAKDAAAGRLDPEAIDEASFTGSLFTAGIPDPDLLIRTSG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AY+E F WPDF R A + R+RRFG S++
Sbjct: 190 EMRISNFLLWQLAYAELYFTEVNWPDFDRNELARAFRDFQSRERRFGMTSEQ 241
>gi|311748727|ref|ZP_07722512.1| di-trans,poly-cis-decaprenylcistransferase [Algoriphagus sp. PR1]
gi|311302829|gb|EFQ79267.1| di-trans,poly-cis-decaprenylcistransferase [Algoriphagus sp. PR1]
Length = 245
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/227 (42%), Positives = 138/227 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA +G R GH I+ + + A +G+K LT+F+FS NW R
Sbjct: 11 PRHIAIIMDGNGRWAKKKGAMRIFGHHHAIKAVRDAIEGANNLGVKYLTLFSFSTENWSR 70
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L+ + + KNNI + IG+ SL + LKEA+++T NTGL
Sbjct: 71 PKEEVEGLMALLVKTIANEVPMMMKNNIVMDSIGDIDSLPETAYKQLKEAKEKTASNTGL 130
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +YS + E+++A + I Q + G + D+ + A +L+T D+PDP+L+IRT G
Sbjct: 131 KLILALSYSGQWELTQAARRIAQKVSDGKLKVDDISQEVFANHLETKDIPDPELMIRTSG 190
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+FLLWQ+AY+E F P WPDF + A+ Y R+RRFG
Sbjct: 191 EFRISNFLLWQLAYTELHFTPVLWPDFREKHLVAAILDYQKRERRFG 237
>gi|126659263|ref|ZP_01730400.1| hypothetical protein CY0110_30628 [Cyanothece sp. CCY0110]
gi|126619462|gb|EAZ90194.1| hypothetical protein CY0110_30628 [Cyanothece sp. CCY0110]
Length = 253
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 91/231 (39%), Positives = 136/231 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA RGLPR GH++G++ +++ + GI LT +AFS NW R
Sbjct: 22 PQHIAVIMDGNGRWAKRRGLPRIMGHQRGVDTLKDLLRCCRDWGIPALTAYAFSTENWGR 81
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P+ E+ L+ L + L++ + N+++R +G L + + + + T NTG+
Sbjct: 82 PLEEVEFLMTLFERVLRRELQEMMAENVRIRFVGALDVLPPSLQLEISRSMEDTENNTGV 141
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY R EI ++ + I Q ++ G + D++ +L +L T +PDPDL+IRT G
Sbjct: 142 QFTVATNYGGRQEIVQSCRAIAQQVKQGLLNLDDINENLFENFLYTKGIPDPDLLIRTSG 201
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E RLS+FLLWQ+AY+E WPDF R + AL Y R+RRFG + K
Sbjct: 202 EMRLSNFLLWQLAYAEIYVTQTLWPDFDRHILHDALLSYQQRERRFGKVGK 252
>gi|24373201|ref|NP_717244.1| undecaprenyl diphosphate synthase [Shewanella oneidensis MR-1]
gi|42559986|sp|Q8EGH1|UPPS_SHEON RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|24347422|gb|AAN54688.1|AE015609_7 undecaprenyl diphosphate synthase [Shewanella oneidensis MR-1]
Length = 275
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 93/237 (39%), Positives = 149/237 (62%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ S P H+ IIMDGNGRWA +G PR GH+ G++ V+AA+++GI++LT+
Sbjct: 27 VLPELVKQSLPKHVAIIMDGNGRWAQTQGKPRVMGHKAGVKAVRRAVSAASQLGIQSLTL 86
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NWRRP E+S L++L + L++ L KN +K+ +IG+ + ++ A
Sbjct: 87 FAFSSENWRRPDKEVSLLMELFFTVLQREIKLLDKNQVKLNIIGDISRFSARLQKQIRAA 146
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E++T N+GL L +A NY R +I +A + + + +E+G + S ++++L +
Sbjct: 147 EEKTAGNSGLILNVAANYGGRWDILQAAQKLAEKVETGEMTSSQFTEEALSEHLCMQNQS 206
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+ DLIIRTGG+ R+S+F+LWQ AY+E VF+ WPDF + F A+ + R RRFG
Sbjct: 207 EVDLIIRTGGDYRISNFVLWQAAYAELVFLDTLWPDFDEQAFHEAIATFANRQRRFG 263
>gi|75760868|ref|ZP_00740882.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|74491652|gb|EAO54854.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar israelensis ATCC 35646]
Length = 222
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/222 (43%), Positives = 140/222 (63%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA R +P K ++ +I A+++ +K LT++AFS NW+RP E+
Sbjct: 1 MDGNGRWAKRRAMPLLRDIMKVCKLVKKITKFASKLNVKVLTLYAFSTENWKRPKKEVDY 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+KL + FL L + N++VRVIG + L +++A + T+ NTGL L A N
Sbjct: 61 LMKLPEEFLGTFLPELIEENVQVRVIGQKDRLPTHTRRAMEKAMEDTKENTGLILNFALN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y SRDEI A++++ +D E G + S +V +++ YL TS +PDP+L+IRT GE R+S+F
Sbjct: 121 YGSRDEIVSAVQHMMKDNEEGKIRSEEVSEEMLSSYLMTSSLPDPELLIRTSGELRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+LWQ+AYSEF F YWPDF E +A+ + R RRFGG+
Sbjct: 181 MLWQIAYSEFWFTDVYWPDFKEEHLLNAITDFQHRGRRFGGV 222
>gi|71907376|ref|YP_284963.1| undecaprenyl pyrophosphate synthetase [Dechloromonas aromatica RCB]
gi|71846997|gb|AAZ46493.1| Undecaprenyl pyrophosphate synthetase [Dechloromonas aromatica RCB]
Length = 253
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/236 (41%), Positives = 145/236 (61%), Gaps = 3/236 (1%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+++ P H+ +IMDGNGRWA R LPR AGH KG+E+ E+V A E G++ LT+FAFS
Sbjct: 14 AAAVPKHVAVIMDGNGRWAKKRFLPRVAGHVKGVELVREMVRACLERGVQYLTLFAFSSE 73
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E++ L++L L++ L +N +++RVIG+ + + ++++AE +T
Sbjct: 74 NWRRPQEEVTLLMQLFVKALEQEVEKLDRNGVRLRVIGDLERFEPRLQELIRQAEAKTAG 133
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NT L+L IA NY R +I +A + + D + +L S P+PDL I
Sbjct: 134 NTRLDLTIAANYGGRWDIMQATNQMLAAHPEKRAGWQECD---LEPHLSMSFAPEPDLFI 190
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE+R+S+FLLWQ+AY+E F P WPDF F A+ + R+RRFG S++
Sbjct: 191 RTGGEERISNFLLWQLAYTELYFTPTLWPDFDTTEFDKAIVSFQQRERRFGRTSEQ 246
>gi|302326429|gb|ADL25630.1| di-trans,poly-cis-decaprenylcistransferase [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 236
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/225 (43%), Positives = 138/225 (61%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA +RGL R GHRKG E + V + ++++T++ FS NW RP
Sbjct: 7 HVAIIMDGNGRWARSRGLERFLGHRKGTESTIDAVEVGVNLKLEHMTLYVFSSENWGRPS 66
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+ L+ L+ + K L + N+K+ VIGN + + L+ A D+T NTG+ L
Sbjct: 67 KEVDYLMNLLIEMVVKEIPDLMEKNVKLTVIGNMNRIPEKPRASLQSAIDKTANNTGMQL 126
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A +Y R EI A K+I ++ +G + +++ + AK+L PDPDLIIRTGGE
Sbjct: 127 NLAISYGGRQEIVEATKSIAAEVAAGKLSIDEINDEIFAKHLYLKGAPDPDLIIRTGGEF 186
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RLS++LLWQ AYSEF WPDF++E F A+ +N R+RRFG
Sbjct: 187 RLSNYLLWQAAYSEFYVTNTLWPDFTKEEFMKAVEFFNTRERRFG 231
>gi|189485410|ref|YP_001956351.1| undecaprenyl pyrophosphate synthetase [uncultured Termite group 1
bacterium phylotype Rs-D17]
gi|170287369|dbj|BAG13890.1| undecaprenyl pyrophosphate synthetase [uncultured Termite group 1
bacterium phylotype Rs-D17]
Length = 224
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 145/229 (63%), Gaps = 7/229 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R LPR GH++G + +IV AA+ +GI+ LT++AFS NW+R
Sbjct: 3 PGHVAIIMDGNGRWAEKRSLPRTFGHKQGGKTVKKIVKAASNLGIRILTLYAFSTENWKR 62
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SEI EL LI F+K+ L N IK+R++G+ ++I ++ A T NTGL
Sbjct: 63 PQSEIKELFSLIMQFIKEELIEL-NNCIKLRILGDLSKFPENIRTEIENASKITSQNTGL 121
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY +R E+ A F+++ ++ +I+ +L T+ PDPDL+IRT G
Sbjct: 122 ELNIALNYGARQELIHA----FEEMSKQNI--KKPTEEIISSFLYTAGQPDPDLLIRTSG 175
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+FLLWQ+AYSE + WPDF+++ A++++ R+R FGGL
Sbjct: 176 EFRISNFLLWQIAYSEIYITDKLWPDFTQQDLETAVSEFQKRERHFGGL 224
>gi|218767121|ref|YP_002341633.1| putative undecaprenyl diphosphate synthase [Neisseria meningitidis
Z2491]
gi|42559883|sp|Q9JX35|UPPS_NEIMA RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|121051129|emb|CAM07400.1| putative undecaprenyl diphosphate synthase [Neisseria meningitidis
Z2491]
Length = 248
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/240 (41%), Positives = 147/240 (61%), Gaps = 6/240 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + ++ P HI +IMDGNGRWA R LPR GH++G++ +V A++G++ LT+FA
Sbjct: 7 AVLEHTAIPKHIAVIMDGNGRWAKKRFLPRIMGHKRGLDALENMVKHCAKLGVQYLTVFA 66
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP E+S L+ L L+K L +NN++++++G+R + IL ++EAE
Sbjct: 67 FSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNMRLKILGSRERFNRQILKGIEEAEA 126
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTGL L IA +Y R +I +A + + S ++ +AKYL D P+P
Sbjct: 127 LTANNTGLTLSIAADYGGRWDILQAANKLIAEGVS------EITEDTLAKYLMLGDAPEP 180
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL IRTGGE R+S+FLLWQ+AY+E F WPDF + A+ + R+RRFG S++
Sbjct: 181 DLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDGKALDDAVASFQKRERRFGRTSEQ 240
>gi|300741496|ref|ZP_07071517.1| di-trans,poly-cis-decaprenylcistransferase [Rothia dentocariosa
M567]
gi|300380681|gb|EFJ77243.1| di-trans,poly-cis-decaprenylcistransferase [Rothia dentocariosa
M567]
Length = 260
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 94/230 (40%), Positives = 138/230 (60%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ ++MDGNGRWA RGLPR GHR G +IVA A E+GI ++ +AFS NW+R
Sbjct: 25 HVAVVMDGNGRWANERGLPRNEGHRAGEAALLDIVAGAIEMGIPYISAYAFSTENWKRSP 84
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
SE+S +++ L + +LK +++R G R L +++ L++ E +T NT L
Sbjct: 85 SEVSFIMRFSTEVLNRQLETLKSWGVRIRWAGRRPKLWKNVISQLEQCERETINNTTCTL 144
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+ NY R EI+ A I QD+++G + + KYLD D+PD DL +R+ GE+
Sbjct: 145 TMCVNYGGRAEIADAAATIAQDVQAGILKPSSITEKTFQKYLDEPDLPDVDLFLRSSGEQ 204
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
R+S+FLLWQ AY+EFVF+ WPD R + A+ +Y RDRR+G + K
Sbjct: 205 RISNFLLWQSAYAEFVFMNVLWPDVDRLTLYKAVEEYASRDRRYGDATDK 254
>gi|325143200|gb|EGC65540.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis
961-5945]
Length = 248
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/240 (41%), Positives = 147/240 (61%), Gaps = 6/240 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + ++ P HI +IMDGNGRWA R LPR GH++G++ +V A++G++ LT+FA
Sbjct: 7 AVLEHTAIPKHIAVIMDGNGRWAKKRFLPRIMGHKRGLDALENMVRHCAKLGVQYLTVFA 66
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP E+S L+ L L+K L +NN++++++G+R + IL ++EAE
Sbjct: 67 FSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNMRLKILGSRERFNRQILQGIEEAEA 126
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTGL L IA +Y R +I +A + + S ++ +AKYL D P+P
Sbjct: 127 LTANNTGLTLSIAADYGGRWDILQAANKLIAEGVS------EITEDTLAKYLMLGDAPEP 180
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL IRTGGE R+S+FLLWQ+AY+E F WPDF + A+ + R+RRFG S++
Sbjct: 181 DLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDGKALDDAVASFQKRERRFGRTSEQ 240
>gi|47569101|ref|ZP_00239790.1| undecaprenyl diphosphate synthase [Bacillus cereus G9241]
gi|47554263|gb|EAL12625.1| undecaprenyl diphosphate synthase [Bacillus cereus G9241]
Length = 210
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 93/210 (44%), Positives = 138/210 (65%)
Query: 30 LPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKG 89
+PR AGH +G++V +I A+++ +K LT++AFS NW+RP E+ L+KL + FL
Sbjct: 1 MPRIAGHHEGMQVVKKITKFASKLNVKVLTLYAFSTENWKRPKKEVDYLMKLPEEFLGTF 60
Query: 90 FYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIK 149
L + N++VRVIG + L +++A ++T+ NTGL L A NY SRDEI A++
Sbjct: 61 LPELIEENVQVRVIGQQDRLPTHTRRAMEKAMEETKENTGLILNFALNYGSRDEIVSAVQ 120
Query: 150 NIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVF 209
++ +D E G V DV +++ YL TS +PDP+L+IRT GE R+S+F+LWQ+AYSEF F
Sbjct: 121 HMMKDSEEGKVRVEDVSEEMLSSYLMTSSLPDPELLIRTSGELRISNFMLWQIAYSEFWF 180
Query: 210 IPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
YWPDF+ E +A+ + R RRFGG+
Sbjct: 181 TDVYWPDFTEEHLLNAITDFQHRGRRFGGV 210
>gi|268590527|ref|ZP_06124748.1| di-trans,poly-cis-decaprenylcistransferase [Providencia rettgeri
DSM 1131]
gi|291314113|gb|EFE54566.1| di-trans,poly-cis-decaprenylcistransferase [Providencia rettgeri
DSM 1131]
Length = 251
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/235 (42%), Positives = 145/235 (61%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ S P H+ IIMDGNGRWA RG R GH+ G+E V A + I +LT++AF
Sbjct: 7 NLSDSMMPKHVAIIMDGNGRWAKQRGKLRITGHKAGVESVRNSVRFAVKNKISSLTLYAF 66
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRRP E+S L++L L +L KNN+K++VIG+ + + + +AE
Sbjct: 67 SSENWRRPEKEVSSLMELFVFALDNEVKNLHKNNVKLKVIGDISRFSERLRKRIDKAEAL 126
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NTGL L IA NY R +IS ++K +F ++SG + D++ I ++ D + D
Sbjct: 127 TQNNTGLKLNIAANYGGRWDISNSVKQVFAKVQSGELSIDDINEESIDNHICMHDQENVD 186
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L+IRTGGE R+S+FLLWQVAY+EF F WPDF +F A++ ++ R+RR+GG
Sbjct: 187 LVIRTGGEHRISNFLLWQVAYAEFYFTNVLWPDFDEMVFQSAVDAFSKRERRYGG 241
>gi|304439993|ref|ZP_07399886.1| di-trans,poly-cis-decaprenylcistransferase [Peptoniphilus duerdenii
ATCC BAA-1640]
gi|304371485|gb|EFM25098.1| di-trans,poly-cis-decaprenylcistransferase [Peptoniphilus duerdenii
ATCC BAA-1640]
Length = 237
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 143/229 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA + R GH++G E +IV + +G+K LT++AFS NW+R
Sbjct: 9 PAHIGIIMDGNGRWAKNKNKIRSFGHKEGAERVIDIVEESYRLGVKYLTLYAFSTENWKR 68
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L+ SF+ K L +N +K+ V+G+ LDD +K+A + T+ N +
Sbjct: 69 PADEVGYLMTLLNSFIDKKLKRLHENGVKINVLGDIDRLDDGTFKSVKKAIETTKDNKKM 128
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA +Y R EI RA K I +D + G + D+ +L T D+P DL+IR GG
Sbjct: 129 VLNIALSYGGRAEIVRASKLIARDYKDGKLNLPDITEDSFNDFLYTKDIPPVDLLIRPGG 188
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
EKR+S+FLL+Q+AY+EF+F+ WPDF E A+ +Y R+RR+GGL
Sbjct: 189 EKRISNFLLYQLAYAEFIFVDTLWPDFREENLREAILEYQNRNRRYGGL 237
>gi|127513559|ref|YP_001094756.1| undecaprenyl diphosphate synthase [Shewanella loihica PV-4]
gi|126638854|gb|ABO24497.1| Undecaprenyl pyrophosphate synthetase [Shewanella loihica PV-4]
Length = 263
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/236 (40%), Positives = 145/236 (61%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+A ++ S P H+ IIMDGNGRWA A+G PR GH+ G++ V+ A E+GI +LT+F
Sbjct: 16 LAELVKQSIPKHVAIIMDGNGRWAQAQGKPRVVGHKAGVKTVRRAVSMAREMGIGSLTLF 75
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP E+S L++L + L++ L KN +++ +IG+ + + A
Sbjct: 76 AFSSENWRRPEKEVSLLMELFFTVLQREIKLLDKNGVRLNIIGDISRFSARLQKQIAAAM 135
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T NTGL L +A NY R +I +A + + + +ESG + S ++++L + P+
Sbjct: 136 EKTANNTGLILNVAANYGGRWDIVQAAQTLAKKVESGEMTSSQFTEEALSQHLSMQNQPE 195
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRTGG+ R+S+F+LWQ AY+E VF WPDF + F A+ + R RRFG
Sbjct: 196 VDLMIRTGGDFRISNFVLWQAAYAELVFTDVLWPDFDEQAFKDAVAVFATRQRRFG 251
>gi|330830751|ref|YP_004393703.1| Undecaprenyl diphosphate synthase [Aeromonas veronii B565]
gi|328805887|gb|AEB51086.1| Undecaprenyl diphosphate synthase [Aeromonas veronii B565]
Length = 258
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/231 (41%), Positives = 144/231 (62%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+SS P H+ IIMDGNGRWA RG R GH+ G++ E V AA I+ LT+FAFS
Sbjct: 12 NSSLPRHVAIIMDGNGRWAQNRGKMRVYGHKAGVKSVREAVTFAARAKIEALTLFAFSSE 71
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+S L++L + L + L N I+++VIG+ + + + +AE T
Sbjct: 72 NWRRPEGEVSALMELFITVLGREVQKLHNNGIRLKVIGDTARFSERLQAKIAKAEALTAN 131
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N GL L IA NY + +I++A + + + + +G + + D+D S++ + + +D+P DL+I
Sbjct: 132 NKGLTLNIAANYGGQWDIAQAARKLAKAVAAGELAADDIDESMLTREVCMADLPPVDLLI 191
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RTGG+ R+S+F+LWQ+AY+E F P WPDF+ F A+ + R+RRFG
Sbjct: 192 RTGGDHRISNFVLWQLAYAELYFTPVLWPDFNEAEFSEAVASFVARERRFG 242
>gi|28868744|ref|NP_791363.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213969122|ref|ZP_03397261.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv. tomato
T1]
gi|301383983|ref|ZP_07232401.1| undecaprenyl pyrophosphate synthetase [Pseudomonas syringae pv.
tomato Max13]
gi|302064131|ref|ZP_07255672.1| undecaprenyl pyrophosphate synthetase [Pseudomonas syringae pv.
tomato K40]
gi|302134058|ref|ZP_07260048.1| undecaprenyl pyrophosphate synthetase [Pseudomonas syringae pv.
tomato NCPPB 1108]
gi|42559802|sp|Q886N9|UPPS_PSESM RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|28851983|gb|AAO55058.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213926120|gb|EEB59676.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv. tomato
T1]
gi|331016371|gb|EGH96427.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 251
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/241 (39%), Positives = 147/241 (60%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ S SS P H+ IIMDGN RWA R LP AGH+ G++ ++ AE ++ LT+F
Sbjct: 4 IKSAGPSSVPRHVAIIMDGNNRWARKRLLPGVAGHKAGVDAVRAVIEVCAEAKVEVLTLF 63
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E+ L++L + L++ L +N+I +R+IG+R ++ ++EAE
Sbjct: 64 AFSSENWQRPAEEVGALMELFFTALRRETKRLNENDISLRIIGDRSRFHPELQAAMREAE 123
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T N+ L IA NY + +I++A + + +++++G + D+ L+ L T D+P
Sbjct: 124 VRTSGNSRFVLQIAANYGGQWDIAQAAQRLAREVQAGHLQPEDITPQLLQTCLATGDLPL 183
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL IRTGGE R+S+FLLWQ+AY+E F +WPDF + AL + R RRFG S+
Sbjct: 184 PDLCIRTGGEHRISNFLLWQLAYAELYFSDLFWPDFKHDAMRAALADFASRQRRFGKTSE 243
Query: 242 K 242
+
Sbjct: 244 Q 244
>gi|307293417|ref|ZP_07573263.1| undecaprenyl diphosphate synthase [Sphingobium chlorophenolicum
L-1]
gi|306881483|gb|EFN12699.1| undecaprenyl diphosphate synthase [Sphingobium chlorophenolicum
L-1]
Length = 246
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 153/246 (62%), Gaps = 11/246 (4%)
Query: 5 MMSSSPPD-----------HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEV 53
M S + PD H+ IIMDGNGRWA R LPR AGHR G+E + AA E+
Sbjct: 1 MASQAKPDLTSGAPAHGARHVAIIMDGNGRWAKKRFLPRIAGHRAGVEAVRRVARAAREL 60
Query: 54 GIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDI 113
G++ LT++AFS NW+RP SE+++L+ L++ F++ N +++R+IGN +LD +
Sbjct: 61 GLECLTLYAFSSENWKRPASEVADLMGLLRHFIQADLDEFHANGVRLRIIGNYQALDPSL 120
Query: 114 LCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKY 173
+ +++ A +T N+G + IA NY ++DE+ R + + + + +G + + ++ +
Sbjct: 121 VDLIESAVARTAGNSGPIIAIALNYGAQDELVRMAQILARRVAAGEIAAEEIGIEHVDAA 180
Query: 174 LDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
L T+D+P DL+IRT GE+RLS+F+LWQ AY+E F WPDF + AL+ + LRD
Sbjct: 181 LYTADLPPLDLMIRTSGEQRLSNFMLWQAAYAELYFTDMLWPDFDGQALAAALDAFRLRD 240
Query: 234 RRFGGL 239
RRFGGL
Sbjct: 241 RRFGGL 246
>gi|296536125|ref|ZP_06898254.1| Di-trans,poly-cis-decaprenylcistransferase [Roseomonas cervicalis
ATCC 49957]
gi|296263537|gb|EFH10033.1| Di-trans,poly-cis-decaprenylcistransferase [Roseomonas cervicalis
ATCC 49957]
Length = 257
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 106/229 (46%), Positives = 146/229 (63%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P H+G+IMDGN RWA RGLPR GH+ G+E V AAA+ GI LT+FAFS NW
Sbjct: 25 SGPVHVGLIMDGNRRWAKGRGLPRALGHKAGVEAVRRTVQAAADAGIGWLTLFAFSSENW 84
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+R E+ +L L++ +L+ +L +N +++RVIG R D + ++EAE T NT
Sbjct: 85 QRSADEVRDLTGLLRLYLRLEVATLARNGVRLRVIGERARFGADTMAAIEEAEAATAHNT 144
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
LNL +A +Y +R EI+ A + + +I +G + VD + +A L T+ +PDPDLIIRT
Sbjct: 145 RLNLTVALSYGARAEIAAAARAVAAEIAAGRLAPEAVDEAALAARLSTAGMPDPDLIIRT 204
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
GE+RLS+FLLWQ AY+EFVF+ WPDF AL ++ R RRFG
Sbjct: 205 SGEQRLSNFLLWQAAYAEFVFLDVLWPDFEAAHLDQALAEFRRRQRRFG 253
>gi|109897578|ref|YP_660833.1| undecaprenyl diphosphate synthase [Pseudoalteromonas atlantica T6c]
gi|109699859|gb|ABG39779.1| Undecaprenyl pyrophosphate synthetase [Pseudoalteromonas atlantica
T6c]
Length = 246
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/227 (42%), Positives = 140/227 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R GHR G++ V+ + + IK LT+FAFS NW R
Sbjct: 13 PQHVAIIMDGNGRWAKKKGKIRTFGHRAGVKGVRASVSFSLKNNIKVLTLFAFSSENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L K L L KNN+K+RVIG+ D ++ +++AE T N GL
Sbjct: 73 PQEEVGVLMELFKMVLSSEVKKLHKNNVKLRVIGDTSRFDKKLVAQIQDAETLTENNDGL 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I A K + + ++ G++ +D +++ Y +D+P+ DL+IRTGG
Sbjct: 133 ILNIAANYGGRWDILNAAKTLAEQVKEGALECEQIDEAMLNSYTCCADLPELDLLIRTGG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+FLLWQVAY+E F YWPDF+ + F A++ + R RR+G
Sbjct: 193 ETRISNFLLWQVAYAELYFTDTYWPDFNEDAFQLAIDNFADRQRRYG 239
>gi|172036264|ref|YP_001802765.1| undecaprenyl pyrophosphate synthase [Cyanothece sp. ATCC 51142]
gi|171697718|gb|ACB50699.1| undecaprenyl pyrophosphate synthetase [Cyanothece sp. ATCC 51142]
Length = 253
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 91/231 (39%), Positives = 136/231 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA RGLPR GH++G++ +++ + GI LT +AFS NW R
Sbjct: 22 PQHIAVIMDGNGRWAKRRGLPRIMGHQRGVDTLKDLLRCCRDWGIPALTAYAFSTENWGR 81
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P+ E+ L+ L + L++ + N+++R +G L + + + + T NTG+
Sbjct: 82 PLEEVEFLMTLFERVLRRELQEMMTENVRIRFVGALDVLPPSLQLEIYRSMEDTENNTGV 141
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY R EI ++ + I Q ++ G + D++ +L +L T +PDPDL+IRT G
Sbjct: 142 QFTVATNYGGRQEIVQSCRAIAQQVKQGLLNLDDINETLFENFLYTKGIPDPDLLIRTSG 201
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E RLS+FLLWQ+AY+E WPDF R + AL Y R+RRFG + K
Sbjct: 202 EMRLSNFLLWQLAYAEIYVTQTLWPDFDRHILRDALLNYQQRERRFGKVGK 252
>gi|238026906|ref|YP_002911137.1| Di-trans-poly-cis-decaprenylcistransferase [Burkholderia glumae
BGR1]
gi|237876100|gb|ACR28433.1| Di-trans-poly-cis-decaprenylcistransferase [Burkholderia glumae
BGR1]
Length = 260
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 100/233 (42%), Positives = 141/233 (60%), Gaps = 3/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH +G++ +V A G++ LT+FAFS NWRR
Sbjct: 17 PRHIAIIMDGNGRWATERRLPRVAGHTRGVDAVRSVVEGCARAGVEYLTLFAFSSENWRR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L + L++ L N I++RV+G+ + I +++ AE +T NT L
Sbjct: 77 PTDEVSFLMRLFITALEREVGKLHANGIRLRVVGDLDRFEPRIRELIRRAETKTARNTRL 136
Query: 131 NLFIAFNYSSRDEISRAIKN-IFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L IA NY R +I +A + I + + G VD + +L + P+PDL IRTG
Sbjct: 137 TLTIAANYGGRWDILQATRKLIAEAVREGREIP--VDEAAFEPHLAMAYAPEPDLFIRTG 194
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+R+S+FLLWQ+AY+EF F ++WPDF A+ Y R+RRFG S +
Sbjct: 195 GEQRVSNFLLWQLAYTEFYFTGKFWPDFDATALADAMASYTDRERRFGRTSAQ 247
>gi|330872735|gb|EGH06884.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 251
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/241 (39%), Positives = 147/241 (60%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ S SS P H+ IIMDGN RWA R LP AGH+ G++ ++ AE ++ LT+F
Sbjct: 4 IKSAGPSSVPRHVAIIMDGNNRWARKRLLPGVAGHKAGVDAVRAVIEVCAEAKVEVLTLF 63
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E+ L++L + L++ L +N+I +R+IG+R ++ ++EAE
Sbjct: 64 AFSSENWQRPAEEVGALMELFFTALRRETKRLNENDISLRIIGDRSRFHPELQAAMREAE 123
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T N+ L IA NY + +I++A + + +++++G + D+ L+ L T D+P
Sbjct: 124 VRTSGNSRFVLQIAANYGGQWDIAQAAQRLAREVQAGHLQPEDITPELLQTCLATGDLPL 183
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL IRTGGE R+S+FLLWQ+AY+E F +WPDF + AL + R RRFG S+
Sbjct: 184 PDLCIRTGGEHRISNFLLWQLAYAELYFSDLFWPDFKHDAMRAALADFASRQRRFGKTSE 243
Query: 242 K 242
+
Sbjct: 244 Q 244
>gi|71279416|ref|YP_268299.1| undecaprenyl diphosphate synthase [Colwellia psychrerythraea 34H]
gi|71145156|gb|AAZ25629.1| undecaprenyl diphosphate synthase [Colwellia psychrerythraea 34H]
Length = 254
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/237 (40%), Positives = 146/237 (61%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+V + S P H+ IIMDGNGRWA +G R AGH+ G+E ++VA A + +K LT+
Sbjct: 7 LVEQTDNKSIPQHVAIIMDGNGRWAQLQGKGRVAGHKAGVESVRQVVATARKSNVKALTL 66
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW+RP E+S L+ L L K L K+NI+ +V+G+ D + + ++
Sbjct: 67 FAFSSENWQRPAKEVSVLMDLFMYVLTKEVKRLHKHNIRFQVVGDLSRFSDKLQKNIAKS 126
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E T NTGL L IA NY R +I++A K + D++ G++ D++ + ++ +++P
Sbjct: 127 EQLTADNTGLVLSIAANYGGRWDIAQAAKKLASDVKQGTMSLDDINEETLNEHTCLANLP 186
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRTGG+ R+S+FLLWQ AY+E F WPDF+ F A++ ++ R+RRFG
Sbjct: 187 TLDLLIRTGGDYRISNFLLWQAAYAELYFTDTLWPDFNEVQFLEAMSCFDHRERRFG 243
>gi|330504240|ref|YP_004381109.1| undecaprenyl pyrophosphate synthetase [Pseudomonas mendocina NK-01]
gi|328918526|gb|AEB59357.1| undecaprenyl pyrophosphate synthetase [Pseudomonas mendocina NK-01]
Length = 248
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/232 (40%), Positives = 140/232 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGN RWA R LP AGH+ G++ ++ AE G++ LT+FAFS NW+R
Sbjct: 10 PRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAESGVEVLTLFAFSSENWQR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L L++ L N+I +R+IG+R ++ ++EAE T +
Sbjct: 70 PAEEVGALMELFLGALRREAKRLLDNDISLRIIGDRSRFHPELQAAMREAELMTAGSRRF 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY + +I++A + + +++++G + D+ L+ L T D+P PDL IRTGG
Sbjct: 130 TLQIAANYGGQWDIAQAAQRLAREVQAGHLQPEDITPHLLQGCLATGDLPLPDLCIRTGG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AYSE F YWPDF E AL + R RRFG S++
Sbjct: 190 EHRISNFLLWQLAYSELYFSDLYWPDFKHEAMRKALADFATRQRRFGKTSEQ 241
>gi|330817435|ref|YP_004361140.1| Di-trans-poly-cis-decaprenylcistransferase [Burkholderia gladioli
BSR3]
gi|327369828|gb|AEA61184.1| Di-trans-poly-cis-decaprenylcistransferase [Burkholderia gladioli
BSR3]
Length = 260
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 143/233 (61%), Gaps = 3/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH +G++ +V A G++ LT+FAFS NWRR
Sbjct: 17 PRHIAIIMDGNGRWATERRLPRVAGHTRGVDAVRSVVEGCARAGVEYLTLFAFSSENWRR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L + L++ L N I++RV+G + I +++ AE +T NT L
Sbjct: 77 PNDEVSFLMRLFITALEREVGKLHANGIRLRVVGELDRFEPRIRELIRRAETKTARNTRL 136
Query: 131 NLFIAFNYSSRDEISRAIKN-IFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L IA NY R +I +A K I + + G +VD + A++L + P+PDL IRTG
Sbjct: 137 TLTIAANYGGRWDILQATKKLIAEAVREGREV--EVDETAFAQHLAMAYAPEPDLFIRTG 194
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+R+S+FLLWQ+AY+EF F ++WPDF AL Y R+RRFG S +
Sbjct: 195 GEQRVSNFLLWQLAYTEFYFTGKFWPDFDAAALADALASYTDRERRFGRTSAQ 247
>gi|281421516|ref|ZP_06252515.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella copri DSM
18205]
gi|281404588|gb|EFB35268.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella copri DSM
18205]
Length = 250
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 99/231 (42%), Positives = 139/231 (60%), Gaps = 6/231 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA RG R GH+ G+E I + +G+K LT++ FS NW R
Sbjct: 11 PEHIAIIMDGNGRWATVRGKERSYGHQAGVETVRRITSECTRLGVKYLTLYTFSTENWNR 70
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L+ + L+ + KNN++ RVIG+ L + L+E D T N +
Sbjct: 71 PADEVAALMGLVLTSLEDEIFM--KNNVRFRVIGDLKRLPQQVQDKLQETMDHTAKNDSM 128
Query: 131 NLFIAFNYSSRDEISRAIKNIFQD-IESGSVCSHDVD---SSLIAKYLDTSDVPDPDLII 186
+ +A +YSSR EI A K + ++ +ESGS D K+L+TS +PDP+L+I
Sbjct: 129 TMVVALSYSSRWEILNATKKMVKEALESGSTYEQIEDKLTEENFEKHLETSFMPDPELLI 188
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RTGGE R+S++LLWQ+AYSE F +WPDF+ E A+ Y R RRFG
Sbjct: 189 RTGGELRISNYLLWQIAYSELYFCDTFWPDFNEEDLHKAIASYQNRQRRFG 239
>gi|76798732|ref|ZP_00780951.1| undecaprenyl diphosphate synthase [Streptococcus agalactiae 18RS21]
gi|76585911|gb|EAO62450.1| undecaprenyl diphosphate synthase [Streptococcus agalactiae 18RS21]
Length = 226
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 101/226 (44%), Positives = 135/226 (59%), Gaps = 4/226 (1%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA R PR GH+ G++ E+ AA+ +G+K LT++AFS NW RP E+
Sbjct: 1 MDGNGRWAKKRLKPRVMGHKAGMDALQEVTIAASGLGVKVLTVYAFSTENWSRPDDEVKF 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
++ L F K L KNN++V+VIG+ L ++ A +T+ N+GL L A N
Sbjct: 61 IMNLPVEFFDKYVPELDKNNVRVQVIGDTHKLPKATYDAMQRACLRTKHNSGLVLNFALN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLIIRTGGEKR 193
Y R EI+ AIK I QD+ + D+ L+A +L T+ +P DPDLIIRT GE R
Sbjct: 121 YGGRSEITNAIKEIAQDVLEAKLNPDDITEDLVANHLMTNSLPYLYRDPDLIIRTSGELR 180
Query: 194 LSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
LS+FL WQ AYSEF F P WPDF ++ A+ YN R RRFG +
Sbjct: 181 LSNFLPWQSAYSEFYFTPVLWPDFKKDELHKAIVDYNQRHRRFGSV 226
>gi|222097268|ref|YP_002531325.1| undecaprenyl diphosphate synthase [Bacillus cereus Q1]
gi|221241326|gb|ACM14036.1| undecaprenyl diphosphate synthase [Bacillus cereus Q1]
Length = 210
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 93/210 (44%), Positives = 138/210 (65%)
Query: 30 LPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKG 89
+PR AGH +G++V +I A+++ +K LT++AFS NW+RP E+ L+KL + FL
Sbjct: 1 MPRIAGHHEGMQVVKKITKFASKLNVKVLTLYAFSTENWKRPKKEVDYLMKLPEEFLGTF 60
Query: 90 FYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIK 149
L + N++VRVIG + L +++A ++T+ NTGL L A NY SRDEI A++
Sbjct: 61 LPELIEENVQVRVIGQQDRLPTHTRRAMEKAMEETKENTGLILNFALNYGSRDEIVSAVQ 120
Query: 150 NIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVF 209
++ +D E G V DV +++ YL TS +PDP+L+IRT GE R+S+F+LWQ+AYSEF F
Sbjct: 121 HMMKDREEGKVRVEDVSEEMLSSYLMTSSLPDPELLIRTSGELRISNFMLWQIAYSEFWF 180
Query: 210 IPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
YWPDF+ E +A+ + R RRFGG+
Sbjct: 181 TDVYWPDFTEEHLLNAITDFQHRGRRFGGV 210
>gi|320323116|gb|EFW79205.1| undecaprenyl pyrophosphate synthetase [Pseudomonas syringae pv.
glycinea str. B076]
gi|320329612|gb|EFW85601.1| undecaprenyl pyrophosphate synthetase [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330878175|gb|EGH12324.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 252
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 94/241 (39%), Positives = 147/241 (60%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + SS P H+ IIMDGN RWA R LP AGH+ G++ ++ AE ++ LT+F
Sbjct: 4 IKPAVPSSVPRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAEAKVEVLTLF 63
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E+ L++L + L++ L +N+I +R+IG+R ++ ++EAE
Sbjct: 64 AFSSENWQRPAEEVGALMELFFTALRRETKRLNENDISLRIIGDRSRFHPELQAAMREAE 123
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T N+ L IA NY + +I++A + + +++++G + D+ L+ L T D+P
Sbjct: 124 VRTSGNSRFVLQIAANYGGQWDIAQAAQRLAREVQAGHLQPEDITPELLQTCLATGDLPL 183
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL IRTGGE R+S+FLLWQ+AY+E F +WPDF + AL + R RRFG S+
Sbjct: 184 PDLCIRTGGEHRISNFLLWQLAYAELYFSDLFWPDFKHDAMRAALADFASRQRRFGKTSE 243
Query: 242 K 242
+
Sbjct: 244 Q 244
>gi|71735344|ref|YP_275974.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|257487080|ref|ZP_05641121.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv. tabaci
ATCC 11528]
gi|289626031|ref|ZP_06458985.1| undecaprenyl pyrophosphate synthetase [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|289651452|ref|ZP_06482795.1| undecaprenyl pyrophosphate synthetase [Pseudomonas syringae pv.
aesculi str. 2250]
gi|298488336|ref|ZP_07006368.1| Undecaprenyl pyrophosphate synthetase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|71555897|gb|AAZ35108.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|298157158|gb|EFH98246.1| Undecaprenyl pyrophosphate synthetase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|330867587|gb|EGH02296.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|330894597|gb|EGH27258.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv. mori
str. 301020]
gi|330985112|gb|EGH83215.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331009285|gb|EGH89341.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 251
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 94/241 (39%), Positives = 147/241 (60%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + SS P H+ IIMDGN RWA R LP AGH+ G++ ++ AE ++ LT+F
Sbjct: 4 IKPAVPSSVPRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAEAKVEVLTLF 63
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E+ L++L + L++ L +N+I +R+IG+R ++ ++EAE
Sbjct: 64 AFSSENWQRPAEEVGALMELFFTALRRETKRLNENDISLRIIGDRSRFHPELQAAMREAE 123
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T N+ L IA NY + +I++A + + +++++G + D+ L+ L T D+P
Sbjct: 124 VRTSGNSRFVLQIAANYGGQWDIAQAAQRLAREVQAGHLQPEDITPELLQTCLATGDLPL 183
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL IRTGGE R+S+FLLWQ+AY+E F +WPDF + AL + R RRFG S+
Sbjct: 184 PDLCIRTGGEHRISNFLLWQLAYAELYFSDLFWPDFKHDAMRAALADFASRQRRFGKTSE 243
Query: 242 K 242
+
Sbjct: 244 Q 244
>gi|296313407|ref|ZP_06863348.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria polysaccharea
ATCC 43768]
gi|296840118|gb|EFH24056.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria polysaccharea
ATCC 43768]
Length = 248
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 100/240 (41%), Positives = 146/240 (60%), Gaps = 6/240 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + ++ P HI +IMDGNGRWA R LPR GH++G++ +V A++G++ LT+FA
Sbjct: 7 AVLEHTAIPKHIAVIMDGNGRWAKKRFLPRIMGHKRGLDALENMVKHCAKLGVQYLTVFA 66
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP E+S L+ L L+K L +NN++++++G+R IL ++EAE
Sbjct: 67 FSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNMRLKILGSRERFSRQILKGIEEAEA 126
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTGL L IA +Y R +I +A + + S ++ +AKYL D P+P
Sbjct: 127 LTANNTGLTLSIAADYGGRWDILQAANKLIAEGVS------EITEDTLAKYLMLGDAPEP 180
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL IRTGGE R+S+FLLWQ+AY+E F WPDF + A+ + R+RRFG S++
Sbjct: 181 DLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDGKALDDAVASFQKRERRFGRTSEQ 240
>gi|148241891|ref|YP_001227048.1| undecaprenyl pyrophosphate synthetase [Synechococcus sp. RCC307]
gi|147850201|emb|CAK27695.1| Undecaprenyl pyrophosphate synthetase [Synechococcus sp. RCC307]
Length = 259
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 91/242 (37%), Positives = 140/242 (57%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ A + + P H+ +IMDGNGRWA RGLPR GHR+G+E + ++ GI LT
Sbjct: 17 LPAVLQADQLPVHVAVIMDGNGRWARQRGLPRVMGHRQGVEALKRTLRLCSDWGIGALTA 76
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP E+S L+ L + L + +L+K +++R +G+ L + ++ EA
Sbjct: 77 YAFSTENWSRPGEEVSFLMTLFEQVLARELEALQKEQVRIRFLGDLAPLPAKLQALITEA 136
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+++ N+G++ + NY SR E+ A + + ++ G + +D A L T+ P
Sbjct: 137 TERSAANSGIHFNVCTNYGSRQELVHAARALAAQVQRGELDPDAIDERAFAAQLHTAGQP 196
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GE+RLS+FLLWQ+AY+E WPDF AL + R RRFGG+
Sbjct: 197 DPDLLIRTSGEQRLSNFLLWQLAYAELHVTDVLWPDFDATALTQALVDFQGRQRRFGGVQ 256
Query: 241 KK 242
++
Sbjct: 257 EE 258
>gi|227892607|ref|ZP_04010412.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus
ultunensis DSM 16047]
gi|227865592|gb|EEJ73013.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus
ultunensis DSM 16047]
Length = 244
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 101/229 (44%), Positives = 144/229 (62%), Gaps = 3/229 (1%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+H+ IIMDGNGRWA R PR GHR+G++ I AA ++GIK LT++AFS NW RP
Sbjct: 9 NHLAIIMDGNGRWAKKRHKPRFVGHREGMDNVERITLAADKLGIKVLTLYAFSTENWARP 68
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E++ L+ L F K +L +NN+KV ++G L + +++ A +T NTGL
Sbjct: 69 KEEVAYLMNLPVRFFDKYMPTLMQNNVKVNIMGYLDELPEKTYQIVERAMAETAQNTGLI 128
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD---VPDPDLIIRT 188
L AFNY SR EI+ A+K + IE+G + S D+ +I+ +L T + DPDL+IRT
Sbjct: 129 LNFAFNYGSRREITSAMKELGGMIETGELKSEDITEKMISDHLMTGNFGKYQDPDLLIRT 188
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
GE+R+S+FLLWQ+AYSE F + WPDF+ + ++ Y R+RRFG
Sbjct: 189 SGEQRISNFLLWQLAYSELAFSDKNWPDFNEDDLRKFVDDYKHRNRRFG 237
>gi|75907137|ref|YP_321433.1| undecaprenyl pyrophosphate synthase [Anabaena variabilis ATCC
29413]
gi|92090650|sp|Q9ZEJ7|UPPS_ANAVT RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|75700862|gb|ABA20538.1| Undecaprenyl pyrophosphate synthetase [Anabaena variabilis ATCC
29413]
Length = 249
Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 87/227 (38%), Positives = 137/227 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA +GLPR GH++G++ +++ + GI+ LT +AFS NW+R
Sbjct: 21 PKHVAVIMDGNGRWAKRQGLPRIMGHKRGVDALKDLLRCCRDWGIQALTAYAFSTENWKR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L + L++ + + N++++ +GN +L + + + + T+ N G+
Sbjct: 81 PQEEVEFLMTLFQRVLRQELREMVEENVQIQFVGNLAALPRSLQAEISRSMEATKNNRGI 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY R EI +A + I Q ++ G + ++D + ++L T+ + DPDL+IRT G
Sbjct: 141 RFSVATNYGGRQEILQACRAIAQKVQQGLLQPDEIDEEVFERHLYTAGIADPDLLIRTSG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E RLS+FLLWQ+AY E WPDF R F AL Y R+RRFG
Sbjct: 201 EMRLSNFLLWQMAYGEIYITDTLWPDFDRTEFHRALCAYQQRERRFG 247
>gi|104774220|ref|YP_619200.1| undecaprenyl pyrophosphate synthetase [Lactobacillus delbrueckii
subsp. bulgaricus ATCC 11842]
gi|116514308|ref|YP_813214.1| undecaprenyl pyrophosphate synthase [Lactobacillus delbrueckii
subsp. bulgaricus ATCC BAA-365]
gi|103423301|emb|CAI98142.1| Undecaprenyl pyrophosphate synthetase [Lactobacillus delbrueckii
subsp. bulgaricus ATCC 11842]
gi|116093623|gb|ABJ58776.1| Undecaprenyl pyrophosphate synthetase [Lactobacillus delbrueckii
subsp. bulgaricus ATCC BAA-365]
gi|325126005|gb|ADY85335.1| Undecaprenyl pyrophosphate synthetase [Lactobacillus delbrueckii
subsp. bulgaricus 2038]
Length = 243
Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 99/233 (42%), Positives = 142/233 (60%), Gaps = 3/233 (1%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+H+ IIMDGNGRWA R +PR GH+ G++ +I AA E+GIK LT++AFS NW RP
Sbjct: 8 NHLAIIMDGNGRWAKKRKMPRFMGHKAGMDNVEKIALAADELGIKVLTLYAFSTENWARP 67
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E++ L+KL F K L+ +N+KV ++G +L + V++ A +T NTGL
Sbjct: 68 KDEVNYLMKLPVKFFDKFMPCLQAHNVKVNIMGYLDALPESTREVVERAMAETAANTGLV 127
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP---DPDLIIRT 188
L AFNY SR EI A++ + ++ SG + ++ +++ L T+ DPDL+IRT
Sbjct: 128 LNFAFNYGSRKEIVSAVQALAKEAASGEITPEEITEDMVSAKLMTAKFAPYSDPDLLIRT 187
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
GE+R+S+FLLWQ+AYSE F + WPDF + Y RDRRFG L +
Sbjct: 188 SGEQRISNFLLWQIAYSELAFTDKAWPDFDENDLAEMVKIYQHRDRRFGKLDE 240
>gi|70728562|ref|YP_258311.1| undecaprenyl diphosphate synthase [Pseudomonas fluorescens Pf-5]
gi|68342861|gb|AAY90467.1| undecaprenyl diphosphate synthase [Pseudomonas fluorescens Pf-5]
Length = 251
Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 96/235 (40%), Positives = 143/235 (60%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
SS P H+ IIMDGN RWA R +P AGH+ G++ ++ AE ++ LT+FAFS N
Sbjct: 10 SSVPRHVAIIMDGNNRWAKKRFMPGVAGHKAGVDAVRAVIEVCAEAKVEVLTLFAFSSEN 69
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W+RP E+S L+ L L++ L +NNI +R+IG+R ++ ++EAE T +
Sbjct: 70 WQRPADEVSALMDLFFKALRREAKRLNENNISLRIIGDRSRFHPELQAAMREAEAITAGS 129
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L IA NY + +I++A + + +++++G + D+ L+ L T D+P PDL IR
Sbjct: 130 DRFILQIAANYGGQWDIAQAAQRLAREVQAGHLRPEDITPGLLQTCLATGDLPLPDLCIR 189
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE R+S+FLLWQ+AY+E F +WPDF E +AL Y R RRFG S++
Sbjct: 190 TGGEHRISNFLLWQLAYAELYFSDLFWPDFKHEAMRNALADYASRQRRFGKTSEQ 244
>gi|242278733|ref|YP_002990862.1| undecaprenyl diphosphate synthase [Desulfovibrio salexigens DSM
2638]
gi|242121627|gb|ACS79323.1| undecaprenyl diphosphate synthase [Desulfovibrio salexigens DSM
2638]
Length = 243
Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 102/227 (44%), Positives = 134/227 (59%), Gaps = 4/227 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA ARGL R GHR G E IV E+GI++LT++ FS NW R
Sbjct: 15 PRHIAVIMDGNGRWAQARGLSRSEGHRAGTEAARNIVTRCRELGIEHLTLYTFSKENWAR 74
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EIS L L+ FLKK SL++ +I+++V+G + V+ +T +
Sbjct: 75 PKDEISTLFDLLTVFLKKELSSLREQDIRLKVLGELSEFPFGVKQVVAHTIKKTENCKSM 134
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NYS RDE+ RA K + + V D+ ++KYL T+ PDPDLIIRT G
Sbjct: 135 TLNLALNYSGRDELVRACKKMITE----GVSEDDITEESLSKYLYTAGQPDPDLIIRTSG 190
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+RLS++LL+Q AYSE F YWPDF+ AL + R RRFG
Sbjct: 191 EQRLSNYLLYQAAYSELYFTDIYWPDFTPAELDKALADFAGRQRRFG 237
>gi|268317512|ref|YP_003291231.1| undecaprenyl diphosphate synthase [Rhodothermus marinus DSM 4252]
gi|262335046|gb|ACY48843.1| undecaprenyl diphosphate synthase [Rhodothermus marinus DSM 4252]
Length = 273
Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 92/227 (40%), Positives = 140/227 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA +G R GH +G+E +I A ++GI LT++ FS NW+R
Sbjct: 36 PVHIAIIMDGNGRWAQQQGKRRVVGHYEGVESVRDITEACVQLGIPYLTLYTFSTENWQR 95
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE++ L++L+ +++ L +N +++RV+G L L++A +T N L
Sbjct: 96 PASEVNALMQLLVKTIRREKTRLLENGVQLRVLGEMAQLPPVCQAELEQAVQETARNDRL 155
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +YS R EI +A++ + + ++ G++ D+D + A L + +PDPDL+IRTGG
Sbjct: 156 VLTLALSYSGRWEILQAVRTLARRVQEGALRPEDIDEATFAAALPGAGLPDPDLLIRTGG 215
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+FLLWQ+AY+E YWP F R + A+ Y R+RRFG
Sbjct: 216 EFRVSNFLLWQIAYTELYITDVYWPAFRRRQLYEAIRSYQNRERRFG 262
>gi|163750355|ref|ZP_02157595.1| undecaprenyl diphosphate synthase [Shewanella benthica KT99]
gi|161329845|gb|EDQ00831.1| undecaprenyl diphosphate synthase [Shewanella benthica KT99]
Length = 264
Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 94/236 (39%), Positives = 144/236 (61%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+A ++ S P H+ IIMDGNGRWA ARG PR GH+ G++ V+ A E+GI++LT+F
Sbjct: 16 IAELVKQSKPKHVAIIMDGNGRWAQARGKPRVMGHKAGVKTVRRAVSTAKEMGIESLTLF 75
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP E+S L++L + L++ L KN +++ +IG+ + + + AE
Sbjct: 76 AFSSENWRRPDKEVSLLMELFFTVLQREIKLLHKNGVRLNIIGDTSRFSERLQKQIAAAE 135
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T NT L L +A NY R +I +A + + + +E+G + S ++++L + +
Sbjct: 136 AKTAGNTELILNVAANYGGRWDIMQAAQALAKKVEAGEINSSQFTEEALSQHLCMQNQAE 195
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRTGG+ R+S+F+LWQ AY+E VF WPDF F A+ + R RRFG
Sbjct: 196 VDLMIRTGGDYRISNFILWQAAYAELVFTDTLWPDFDENAFKRAVATFASRQRRFG 251
>gi|30249676|ref|NP_841746.1| undecaprenyl pyrophosphate synthetase [Nitrosomonas europaea ATCC
19718]
gi|42559796|sp|Q82TZ9|UPPS_NITEU RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|30180713|emb|CAD85625.1| Undecaprenyl pyrophosphate synthetase family [Nitrosomonas europaea
ATCC 19718]
Length = 263
Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 99/232 (42%), Positives = 140/232 (60%), Gaps = 3/232 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH +G+E + A E G+ +LTIFAFS NWRR
Sbjct: 18 PKHIAIIMDGNGRWARKRFLPRIAGHTQGVEAVRGTIKACIERGVSHLTIFAFSSENWRR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L + L++ L +N ++ RVIG+ D I+ +++ E T N+ L
Sbjct: 78 PAEEVKLLMQLFLAALEREVTGLHENGVRFRVIGDISKFDPKIVDFVQQGEALTAGNSRL 137
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
N +A NY R +I +A++ + + +V + D IA++L +D P+PDL IRTGG
Sbjct: 138 NFTVAANYGGRWDIMQAVRKMITENPDSAVTFDEPD---IARHLALADAPEPDLFIRTGG 194
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AY+E F WPDF A+ Y R+RRFG S++
Sbjct: 195 ECRISNFLLWQLAYTELYFTDTLWPDFDASALDEAIASYRKRERRFGRTSEQ 246
>gi|300771358|ref|ZP_07081234.1| Di-trans,poly-cis-decaprenylcistransferase [Sphingobacterium
spiritivorum ATCC 33861]
gi|300762028|gb|EFK58848.1| Di-trans,poly-cis-decaprenylcistransferase [Sphingobacterium
spiritivorum ATCC 33861]
Length = 245
Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 95/232 (40%), Positives = 142/232 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA G R GH+ G+ E + A E+GI LT++AFS NW R
Sbjct: 13 PQHVAIIMDGNGRWAKGLGKLRIFGHQNGVSAVREAMEGAVELGIPYLTLYAFSTENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L+ + L K + + N I++ IG+ L + L E+ + T NT
Sbjct: 73 PKLEVLALMELLVTTLSKEIKTFQDNGIRLNTIGDIDKLPKNCRAKLIESMELTAQNTTC 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +YSS+ EI A K I + + G++ +D + A +L T ++PDPDL+IRT G
Sbjct: 133 VLTLALSYSSQKEIVDATKEICKQVMQGNLDIDAIDEKVFANHLYTRNMPDPDLLIRTSG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S++LLWQ+AYSE F+P+ WP+F+RE + + Y R+RRFG S++
Sbjct: 193 EQRISNYLLWQIAYSELSFLPKMWPEFTREDLYECVYNYQQRERRFGKTSEQ 244
>gi|237744133|ref|ZP_04574614.1| undecaprenyl pyrophosphate synthetase [Fusobacterium sp. 7_1]
gi|229431362|gb|EEO41574.1| undecaprenyl pyrophosphate synthetase [Fusobacterium sp. 7_1]
Length = 230
Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 99/234 (42%), Positives = 142/234 (60%), Gaps = 7/234 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M + P+HI IIMDGNGRWA RGL R GH +G + + + E+G+K LT++AFS
Sbjct: 1 MEKNIPNHIAIIMDGNGRWAKKRGLARSFGHMEGAKTLRKALEYLTEIGVKYLTVYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+S L+KL ++K ++ KN I+ V G + ++ + + +++ E++T+
Sbjct: 61 ENWNRPQDEVSTLMKLFLKYIKSERKNMMKNRIRFFVSGRKDNVPEKLQKEIEKLEEETK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N + L IAFNY SR EI A+ I +D ++ +KYL +D PDPDL+
Sbjct: 121 NNDKITLNIAFNYGSRAEIVDAVNRIIKD------GKENITEEDFSKYL-YNDFPDPDLV 173
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRT GE R+S+FLLWQ+AYSEF WPDF + A+ YN R+RRFGG+
Sbjct: 174 IRTSGEMRISNFLLWQIAYSEFYITDTLWPDFDEKEIDKAIESYNQRERRFGGV 227
>gi|270307746|ref|YP_003329804.1| undecaprenyl diphosphate synthase [Dehalococcoides sp. VS]
gi|270153638|gb|ACZ61476.1| undecaprenyl diphosphate synthase [Dehalococcoides sp. VS]
Length = 236
Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 99/234 (42%), Positives = 144/234 (61%), Gaps = 4/234 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
++++PP+HI IIMDGNGRWA RGL R GH+ G+E ++ +GIK +T+++FS
Sbjct: 7 INNTPPNHIAIIMDGNGRWAERRGLSRIDGHKAGLENARLVIRHLNSLGIKYVTLYSFST 66
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP +EI L LI + L +NN+++R +G+ L + L+ T
Sbjct: 67 ENWKRPDAEIKGLFGLINDVMSSYIPELVENNVRLRHLGHLDKLPAILRHKLEGVLSATS 126
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
NTGL L +AF+Y RDEI +A+K + +D + + + A+YL T+D+P+ DL+
Sbjct: 127 QNTGLTLCLAFDYGGRDEIIQAVKGLVKD----GIAVDKITEDVFARYLYTADIPEADLV 182
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRTGGE RLS+FL+WQ AYSE F WPDF + A++ +N R RRFGGL
Sbjct: 183 IRTGGEIRLSNFLIWQSAYSELYFSEVMWPDFGEKEIDKAISAFNQRQRRFGGL 236
>gi|115441143|ref|NP_001044851.1| Os01g0857200 [Oryza sativa Japonica Group]
gi|15290008|dbj|BAB63702.1| putative undecaprenyl pyrophosphate synthetase [Oryza sativa
Japonica Group]
gi|56785360|dbj|BAD82318.1| putative undecaprenyl pyrophosphate synthetase [Oryza sativa
Japonica Group]
gi|113534382|dbj|BAF06765.1| Os01g0857200 [Oryza sativa Japonica Group]
gi|125572686|gb|EAZ14201.1| hypothetical protein OsJ_04125 [Oryza sativa Japonica Group]
Length = 295
Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 99/237 (41%), Positives = 140/237 (59%), Gaps = 4/237 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + S P H+ ++MDGN RWA ARGLP AGH G E V + GI+ LT FAFS
Sbjct: 55 LRAESLPRHVAVVMDGNARWARARGLPSAAGHEAGRRALEETVRLSRAWGIRALTAFAFS 114
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP E+ L++L + + + I++RVIG+ L + + +EAE+ T
Sbjct: 115 NENWSRPKVEVDFLMRLFERVIHDSVAEFLREGIRLRVIGDSSRLPVSLQKIAREAEETT 174
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS----DVP 180
R N+ L+L +A +YS R +I +A + + Q ++S ++ + D+D +L A L+TS + P
Sbjct: 175 RNNSQLDLTLAISYSGRRDIVQACRKLAQKVQSKALAAEDIDEALFADELETSCAADEFP 234
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDL+IRT GE RLS+FLLWQ AYSE F WPDF + AL + RDRRFG
Sbjct: 235 YPDLLIRTSGELRLSNFLLWQSAYSELFFTNTLWPDFGEADYLEALCSFQSRDRRFG 291
>gi|325519184|gb|EGC98649.1| undecaprenyl diphosphate synthase [Burkholderia sp. TJI49]
Length = 260
Score = 198 bits (504), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 141/233 (60%), Gaps = 3/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH +G++ +V A G++ LT+FAFS NWRR
Sbjct: 17 PRHIAIIMDGNGRWATERRLPRVAGHTRGVDAVRAVVEGCARAGVEYLTLFAFSSENWRR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L + L++ L N I++RV+G+ + I +++ AE +T NT L
Sbjct: 77 PNDEVSFLMRLFITALEREVGKLHANGIRLRVVGDLERFEPRIRELIRRAETKTARNTRL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L IA NY R +I +A K + Q + G +V A +L + P+PDL IRTG
Sbjct: 137 TLTIAANYGGRWDILQATKKLVEQAVREGREV--EVTEDAFAPHLAMAYAPEPDLFIRTG 194
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+R+S+FLLWQ+AY+EF F +YWPDF AL Y R+RRFG S +
Sbjct: 195 GEQRVSNFLLWQLAYAEFYFTDKYWPDFDGAALADALASYTERERRFGRTSAQ 247
>gi|66044595|ref|YP_234436.1| di-trans-poly-cis-decaprenylcistransferase [Pseudomonas syringae
pv. syringae B728a]
gi|63255302|gb|AAY36398.1| Di-trans-poly-cis-decaprenylcistransferase [Pseudomonas syringae
pv. syringae B728a]
gi|330896061|gb|EGH28282.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv.
japonica str. M301072PT]
gi|330968957|gb|EGH69023.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv. aceris
str. M302273PT]
Length = 251
Score = 198 bits (504), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 94/241 (39%), Positives = 146/241 (60%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + SS P H+ IIMDGN RWA R LP AGH+ G++ ++ AE ++ LT+F
Sbjct: 4 IKPAVPSSVPRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAEARVEVLTLF 63
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E+ L++L + L++ L +N I +R+IG+R ++ ++EAE
Sbjct: 64 AFSSENWQRPAEEVGALMELFFTALRRETKRLNENEISLRIIGDRSRFHPELQAAMREAE 123
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T N+ L IA NY + +I++A + + +++++G + D+ L+ L T D+P
Sbjct: 124 VRTSGNSRFVLQIAANYGGQWDIAQAAQRLAREVQAGHLQPEDITPQLLQTCLATGDLPL 183
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL IRTGGE R+S+FLLWQ+AY+E F +WPDF + AL + R RRFG S+
Sbjct: 184 PDLCIRTGGEHRISNFLLWQLAYAELYFSDLFWPDFKHDAMRAALADFASRQRRFGKTSE 243
Query: 242 K 242
+
Sbjct: 244 Q 244
>gi|269794675|ref|YP_003314130.1| Undecaprenyl pyrophosphate synthetase [Sanguibacter keddieii DSM
10542]
gi|269096860|gb|ACZ21296.1| Undecaprenyl pyrophosphate synthetase [Sanguibacter keddieii DSM
10542]
Length = 279
Score = 198 bits (504), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 89/228 (39%), Positives = 141/228 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ ++MDGNGRWA ARGLPR AGH G ++VA A ++G+++++ +AFS NW+R
Sbjct: 36 PQHVAVVMDGNGRWANARGLPRTAGHEAGEAALLDVVAGAIDIGVQHVSAYAFSTENWKR 95
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + L++ +L ++VR G R L ++ L+ AE+ TR NT
Sbjct: 96 SPEEVRFLMGFNRDVLRRQRDTLNSWGVRVRWAGRRPRLWRSVISELEVAEELTRENTVC 155
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R EI+ A + I +++ +G + + +A+YLD D+PD DL +R+ G
Sbjct: 156 TLTMCVNYGGRAEIADAAQAIGREVAAGRLDPSKITEKTVARYLDEPDLPDVDLFLRSSG 215
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R+S+F++WQ AY+E VF+ + WPD R + A+ +Y RDRR+GG
Sbjct: 216 EQRISNFMIWQSAYAELVFMNQLWPDVDRRTLWRAVEEYARRDRRYGG 263
>gi|330964145|gb|EGH64405.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 251
Score = 198 bits (504), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 94/235 (40%), Positives = 145/235 (61%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
SS P H+ IIMDGN RWA R LP AGH+ G++ ++ AE ++ LT+FAFS N
Sbjct: 10 SSVPRHVAIIMDGNNRWARKRLLPGVAGHKAGVDAVRAVIEVCAEAKVEVLTLFAFSSEN 69
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W+RP E+ L++L + L++ L +N+I +R+IG+R ++ ++EAE +T N
Sbjct: 70 WQRPAEEVGALMELFFTALRRETKRLNENDISLRIIGDRSRFHPELQAAMREAEVRTSGN 129
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+ L IA NY + +I++A + + +++++G + D+ L+ L T D+P PDL IR
Sbjct: 130 SRFVLQIAANYGGQWDIAQAAQRLAREVQAGHLQPEDITPELLQTCLATGDLPLPDLCIR 189
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE R+S+FLLWQ+AY+E F +WPDF + AL + R RRFG S++
Sbjct: 190 TGGEHRISNFLLWQLAYAELYFSDLFWPDFKHDAMRAALADFASRQRRFGKTSEQ 244
>gi|147669000|ref|YP_001213818.1| undecaprenyl diphosphate synthase [Dehalococcoides sp. BAV1]
gi|146269948|gb|ABQ16940.1| undecaprenyl diphosphate synthase [Dehalococcoides sp. BAV1]
Length = 236
Score = 198 bits (504), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 100/238 (42%), Positives = 143/238 (60%), Gaps = 4/238 (1%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ ++++PPDHI IIMDGNGRWA RGL R GH+ G+E ++ + +G+K +T++
Sbjct: 3 TTATINNTPPDHIAIIMDGNGRWAERRGLSRLEGHKAGLENARRVIRHLSSLGVKYVTLY 62
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
+FS NW+RP +EI L LI + L NNI++R +G+ L + L+
Sbjct: 63 SFSTENWKRPDAEIKGLFGLINDVISSYIPELAGNNIRLRHLGHLDKLPAMLKHKLESLL 122
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T N+GL L +AF+Y RDEI +A+K + +D + + L A YL T+ +P+
Sbjct: 123 SETSQNSGLTLSLAFDYGGRDEIIQAVKKLVKD----GIEPDKISEELFAGYLFTTGIPE 178
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
LIIRTGGE RLS+FLLWQ AYSE F WPDF + A++ +N R RRFGGL
Sbjct: 179 AGLIIRTGGEIRLSNFLLWQSAYSELYFSEVMWPDFGEKEIDRAISAFNQRQRRFGGL 236
>gi|254302824|ref|ZP_04970182.1| uppS gene product [Fusobacterium nucleatum subsp. polymorphum ATCC
10953]
gi|148323016|gb|EDK88266.1| uppS gene product [Fusobacterium nucleatum subsp. polymorphum ATCC
10953]
Length = 230
Score = 198 bits (504), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 103/235 (43%), Positives = 142/235 (60%), Gaps = 7/235 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M + P HI IIMDGNGRWA RGL R GH +G + + + E+G+K LT++AFS
Sbjct: 1 MERNIPHHIAIIMDGNGRWAKKRGLARSFGHMEGAKTLRKALEYLTEIGVKYLTVYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+S L+KL ++K ++ KN I+ V G + ++ + + +++ E++T+
Sbjct: 61 ENWNRPQDEVSTLMKLFLKYIKNERKNMMKNKIRFFVSGRKNNIPEKLQKEIEKLEEETK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N + L IAFNY SR EI A+ I IE G V + D AKYL +D PDPDL+
Sbjct: 121 NNDKITLNIAFNYGSRAEIVDAVNKI---IEDGKVNITEED---FAKYL-YNDFPDPDLV 173
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IRT GE R+S+FLLWQ+AYSE WPDF + A+ YN R+RRFGG+
Sbjct: 174 IRTSGEMRISNFLLWQIAYSELYITDTLWPDFDEKEIDKAIESYNQRERRFGGVK 228
>gi|302187902|ref|ZP_07264575.1| undecaprenyl pyrophosphate synthetase [Pseudomonas syringae pv.
syringae 642]
Length = 251
Score = 198 bits (504), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 94/241 (39%), Positives = 146/241 (60%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + SS P H+ IIMDGN RWA R LP AGH+ G++ ++ AE ++ LT+F
Sbjct: 4 IKPAVPSSVPRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAEARVEVLTLF 63
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E+ L++L + L++ L +N I +R+IG+R ++ ++EAE
Sbjct: 64 AFSSENWQRPAEEVGALMELFFTALRRETKRLNENEISLRIIGDRSRFHPELQAAMREAE 123
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T N+ L IA NY + +I++A + + +++++G + D+ L+ L T D+P
Sbjct: 124 VRTSGNSRFVLQIAANYGGQWDIAQAAQRLAREVQAGHLQPEDITPELLQTCLATGDLPL 183
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL IRTGGE R+S+FLLWQ+AY+E F +WPDF + AL + R RRFG S+
Sbjct: 184 PDLCIRTGGEHRISNFLLWQLAYAELYFSDLFWPDFKHDAMRAALADFASRQRRFGKTSE 243
Query: 242 K 242
+
Sbjct: 244 Q 244
>gi|225873247|ref|YP_002754706.1| undecaprenyl diphosphate synthase [Acidobacterium capsulatum ATCC
51196]
gi|225792464|gb|ACO32554.1| undecaprenyl diphosphate synthase [Acidobacterium capsulatum ATCC
51196]
Length = 261
Score = 198 bits (504), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 93/231 (40%), Positives = 145/231 (62%), Gaps = 1/231 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI-NNWR 69
P H+ IIMDGNGRWA R L R GH+KG + IV + +G+ LT++AFS+ NN +
Sbjct: 13 PHHVAIIMDGNGRWAGKRSLKRFLGHQKGADAVQYIVETCSRIGLPWLTLYAFSLENNLK 72
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP +E++ L+ L++++L + NN+++R IG L ++ ++ AE+ T NTG
Sbjct: 73 RPRTEVNFLMMLLRTYLNNNVQRMNDNNVRIRYIGRTEELPGEVRERMQWAEEATVRNTG 132
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L +A NY SR EI A++ I ++++G + D++ I + L T+ +PDPDL+IRT
Sbjct: 133 TTLTLALNYGSRSEIVDAVRRIAAEVKAGKLQPGDINEQDIDRNLYTAYMPDPDLLIRTS 192
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
GE R+S++LLWQ+AY+E + WPD+ A+ +Y R+RRFGGL+
Sbjct: 193 GEMRISNYLLWQIAYTEILVTDRLWPDYRGIHLLEAIEEYQRRERRFGGLN 243
>gi|16332030|ref|NP_442758.1| undecaprenyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
gi|2501568|sp|Q55482|UPPS_SYNY3 RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|1001342|dbj|BAA10829.1| sll0506 [Synechocystis sp. PCC 6803]
Length = 249
Score = 198 bits (504), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 89/227 (39%), Positives = 134/227 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA RG+PR GH++G++ ++ + GI LT +AFS NW R
Sbjct: 21 PQHVAVIMDGNGRWAKQRGMPRIMGHQRGVDSLKNLLRCCDDWGIAALTAYAFSTENWGR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P+ E+ L+ L + L++ + N+++R +GN SL + + + + T+ NTG+
Sbjct: 81 PLEEVEFLMTLFERVLRRELKEMMAENVRIRFVGNLTSLPRSLQDEIARSMEDTKNNTGI 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY R EI + I ++++SG + +D ++ KYL T + PDL+IRT G
Sbjct: 141 RFTVATNYGGRQEIVHVCQAIAREVQSGKLDPETIDEGVVEKYLYTEGLSHPDLLIRTSG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+FLLWQ+AY+E WPDF R+ F AL Y R RRFG
Sbjct: 201 ELRISNFLLWQMAYAEIYVTSTLWPDFDRQAFHLALRDYQQRHRRFG 247
>gi|260424722|ref|ZP_05733060.2| di-trans,poly-cis-decaprenylcistransferase [Dialister invisus DSM
15470]
gi|260402949|gb|EEW96496.1| di-trans,poly-cis-decaprenylcistransferase [Dialister invisus DSM
15470]
Length = 242
Score = 198 bits (504), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 101/231 (43%), Positives = 138/231 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ II+DGNGRWA RG R GH+ G IV AA +GI+ LTI+AFS NW+R
Sbjct: 9 PRHVAIILDGNGRWAQQRGRERTYGHQVGAANVKNIVRAAGHMGIRCLTIYAFSTENWKR 68
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L K++L L +N++V +IG+ + L + +K E T N GL
Sbjct: 69 PAFEVNFLMHLFKNYLIGQLRELIADNVQVHIIGDTMELPSSLQEEIKVCEKDTANNDGL 128
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY R E+ A+++I Q + G + + V I +L S D DL+IRTGG
Sbjct: 129 ILNVAINYGGRMELVNAVRDISQKVAEGRMEADSVTEETITNHLYPSASSDVDLLIRTGG 188
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E R+S+FLLWQV+YSE F P WPDFS E A+ + RDRRFGGL++
Sbjct: 189 ESRISNFLLWQVSYSELYFTPVLWPDFSSEELEKAVFWFTGRDRRFGGLTE 239
>gi|117618835|ref|YP_855718.1| undecaprenyl diphosphate synthase [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117560242|gb|ABK37190.1| undecaprenyl diphosphate synthase [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 258
Score = 198 bits (504), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 95/236 (40%), Positives = 144/236 (61%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
V +SS P H+ IIMDGNGRWA RG R GH+ G++ E V AA I+ LT+F
Sbjct: 7 VGDCANSSLPRHVAIIMDGNGRWAQNRGKMRVYGHKAGVKSVREAVTFAARAKIEALTLF 66
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP E+S L++L + L + L N I+++VIG+ + + + +AE
Sbjct: 67 AFSSENWRRPEGEVSALMELFMTVLGREVKKLHSNGIRLKVIGDTARFSERLQAKIAKAE 126
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T N GL L IA NY + +I++A + + + + SG + + +D +++ + + +D+P
Sbjct: 127 ALTANNQGLTLNIAANYGGQWDIAQAARKLARAVASGELAADQIDEAMLGREVCMADLPP 186
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRTGG+ R+S+F+LWQ+AY+E F P WPDF+ F A+ + R+RRFG
Sbjct: 187 VDLLIRTGGDHRISNFVLWQLAYAELYFTPVLWPDFNEAEFSEAVASFVARERRFG 242
>gi|116629462|ref|YP_814634.1| undecaprenyl pyrophosphate synthase [Lactobacillus gasseri ATCC
33323]
gi|311110890|ref|ZP_07712287.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus gasseri
MV-22]
gi|116095044|gb|ABJ60196.1| Undecaprenyl pyrophosphate synthetase [Lactobacillus gasseri ATCC
33323]
gi|311066044|gb|EFQ46384.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus gasseri
MV-22]
Length = 239
Score = 198 bits (504), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 99/231 (42%), Positives = 144/231 (62%), Gaps = 3/231 (1%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+H+ IIMDGNGRWA R L R GHR G++ I AA E+GIK LT++AFS NW RP
Sbjct: 9 NHLAIIMDGNGRWAKKRNLLRFVGHRHGMDNIRNIALAANEMGIKVLTLYAFSTENWARP 68
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E++ L++L F K L +NN++V ++G L + V ++A +T NTG+
Sbjct: 69 TDEVNYLMRLPIDFFDKFMPELMENNVRVNIMGFLDELPEKTYLVTQKAMAETANNTGMV 128
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP---DPDLIIRT 188
L AFNY SR EI+ ++ I + +++G + D+D +++ +L T + DPDL+IRT
Sbjct: 129 LNFAFNYGSRREITAGVQEIARQVKAGKINPSDIDEKMVSDHLLTHSLTPYDDPDLLIRT 188
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE+RLS+FLLWQ+AY+EF F + WPDF + + + Y R+RRFG L
Sbjct: 189 SGEERLSNFLLWQMAYTEFSFSNKLWPDFDKNDLENLVKDYYGRNRRFGKL 239
>gi|260494282|ref|ZP_05814413.1| di-trans,poly-cis-decaprenylcistransferase [Fusobacterium sp.
3_1_33]
gi|260198428|gb|EEW95944.1| di-trans,poly-cis-decaprenylcistransferase [Fusobacterium sp.
3_1_33]
Length = 230
Score = 198 bits (504), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 99/234 (42%), Positives = 142/234 (60%), Gaps = 7/234 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M + P+HI IIMDGNGRWA RGL R GH +G + + + E+G+K LT++AFS
Sbjct: 1 MKKNIPNHIAIIMDGNGRWAKKRGLARSFGHMEGAKTLRKALEYLTEIGVKYLTVYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+S L+KL ++K ++ KN I+ V G + ++ + + +++ E++T+
Sbjct: 61 ENWNRPQDEVSTLMKLFLKYIKSERKNMMKNRIRFFVSGRKNNVPEKLQKEIEKLEEETK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N + L IAFNY SR EI A+ I +D ++ +KYL +D PDPDL+
Sbjct: 121 NNDRITLNIAFNYGSRAEIVDAVNRIIKD------GKENITEEDFSKYL-YNDFPDPDLV 173
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRT GE R+S+FLLWQ+AYSEF WPDF + A+ YN R+RRFGG+
Sbjct: 174 IRTSGEMRISNFLLWQIAYSEFYITDTLWPDFDEKEIDKAIESYNQRERRFGGV 227
>gi|253988130|ref|YP_003039486.1| undecaprenyl pyrophosphate synthetase [Photorhabdus asymbiotica
subsp. asymbiotica ATCC 43949]
gi|253779580|emb|CAQ82741.1| undecaprenyl pyrophosphate synthetase [Photorhabdus asymbiotica]
Length = 253
Score = 198 bits (504), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 101/233 (43%), Positives = 143/233 (61%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+SS P H+ IIMDGNGRWA RG R GHR GI+ V+ +A+ I++LT++AFS
Sbjct: 11 LSSLLPKHVAIIMDGNGRWAKKRGKLRVFGHRAGIKAVRSAVSFSAKHKIESLTLYAFSS 70
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+S L++L L SL K+NIK+ +IG+ + + ++ + T
Sbjct: 71 ENWNRPEQEVSSLMELFIFALDNEIKSLHKHNIKLSIIGDISRFSERLQERIRRSVKLTA 130
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
NTGL L IA NY R +I ++++ I Q I+ S+ D+ L+ Y++ S P DL+
Sbjct: 131 NNTGLQLNIAANYGGRWDIVQSVQKIAQQIKDNSLEPQDITEELVNNYINLSQQPQVDLV 190
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
IRTGGE R+S+FLLWQ+AY+EF F WPDF +F A+N + R+RRFGG
Sbjct: 191 IRTGGEHRISNFLLWQIAYAEFYFTDILWPDFDETVFEGAINAFAKRERRFGG 243
>gi|34540046|ref|NP_904525.1| undecaprenyl pyrophosphate synthase [Porphyromonas gingivalis W83]
gi|42559746|sp|Q7MXJ4|UPPS_PORGI RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|34396357|gb|AAQ65424.1| undecaprenyl diphosphate synthase [Porphyromonas gingivalis W83]
Length = 254
Score = 198 bits (504), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 96/232 (41%), Positives = 143/232 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI ++MDGNGRWA RG RC GH G++ + AAA G++ LT + FS NW R
Sbjct: 15 PRHIALVMDGNGRWAKIRGKERCEGHAAGVDALRVALRAAAGCGVEYLTAYTFSTENWNR 74
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L + + L NNI++ IG+ L +D+ L++ +T NTGL
Sbjct: 75 PEEEVRALMGLFVTAIMNEMLDLMTNNIRLLAIGDFSRLPEDVRESLEKGIRETAGNTGL 134
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +YSSR E++ I+ + + + GSV D++ L++ +L T+ +PDPDL IRTGG
Sbjct: 135 TLVLALSYSSRWEMTDVIRRLARKVRDGSVEPEDINVDLVSDHLSTAGIPDPDLFIRTGG 194
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
EKR+S+FL+WQ+AY+E F WPDF + A+ +Y+ R+RRFG S++
Sbjct: 195 EKRISNFLMWQMAYTELFFTDTLWPDFDADCLKAAIEEYSSRERRFGKTSEQ 246
>gi|308048673|ref|YP_003912239.1| undecaprenyl pyrophosphate synthetase [Ferrimonas balearica DSM
9799]
gi|307630863|gb|ADN75165.1| Undecaprenyl pyrophosphate synthetase [Ferrimonas balearica DSM
9799]
Length = 250
Score = 198 bits (504), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 96/237 (40%), Positives = 143/237 (60%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+S S P HI IIMDGNGRWA A+G PR GHR G++ +VA E +++LT+FAFS
Sbjct: 9 ISVSTPRHIAIIMDGNGRWAEAQGQPRVMGHRAGVKSVRNVVALCRERQVESLTLFAFSS 68
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+ L++L + L++ LKKN++++++IG+ D+ + + +AE T
Sbjct: 69 ENWHRPEREVKLLMRLFTTVLRREVKLLKKNDVRLKIIGDVSGFDEKLQARILQAEADTA 128
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
TG+ L IA NY R ++ A + + + G + D+D +L+ ++ SD + DL+
Sbjct: 129 ECTGMVLNIAANYGGRWDVVNAARKLTELALQGEIAVSDIDEALLDRFTSLSDQAEVDLL 188
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTGGE+R+S+F+LWQ AYSE F WPDF AL+ + R RRFG S +
Sbjct: 189 IRTGGEQRISNFVLWQCAYSELFFSDTLWPDFGEAALQEALDAFACRQRRFGLTSAQ 245
>gi|17230487|ref|NP_487035.1| undecaprenyl pyrophosphate synthetase [Nostoc sp. PCC 7120]
gi|20140456|sp|P58563|UPPS1_ANASP RecName: Full=Undecaprenyl pyrophosphate synthase 1; Short=UPP
synthase 1; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase 1;
AltName: Full=Undecaprenyl diphosphate synthase 1;
Short=UDS 1
gi|17132089|dbj|BAB74694.1| undecaprenyl pyrophosphate synthetase [Nostoc sp. PCC 7120]
Length = 249
Score = 198 bits (504), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 138/227 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA +GLPR GH++G++ +++ + GI+ LT +AFS NW+R
Sbjct: 21 PKHVAVIMDGNGRWAKRQGLPRIMGHKRGVDALKDLLRCCRDWGIQALTAYAFSTENWKR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L + L++ + + N++++ +GN +L + + + ++T+ N G+
Sbjct: 81 PQEEVEFLMTLFQRVLRQELREMVEENVQIQFVGNLTALPRSLQAEISRSMEETKNNRGI 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY R EI +A + I Q ++ G + +++ + ++L T+ + DPDL+IRT G
Sbjct: 141 RFSVATNYGGRQEILQACRAIAQKVQQGLLQPDEINEEVFERHLYTAGISDPDLLIRTSG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E RLS+FLLWQ+AY E WPDF R F AL Y R+RRFG
Sbjct: 201 EMRLSNFLLWQMAYGEIYITDTLWPDFDRTEFHRALCAYQQRERRFG 247
>gi|257094440|ref|YP_003168081.1| undecaprenyl diphosphate synthase [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257046964|gb|ACV36152.1| undecaprenyl diphosphate synthase [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 264
Score = 198 bits (504), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 102/236 (43%), Positives = 144/236 (61%), Gaps = 3/236 (1%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+S P H+ IIMDGNGRWA R LPR AGHR+G+E V A E GI+ LT+FAFS
Sbjct: 14 TSVVPRHVAIIMDGNGRWARKRLLPRFAGHRRGVETVRATVRACLERGIEYLTLFAFSSE 73
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+S L++L L++ L +N +++RVIG+ + D+ ++ +E +T
Sbjct: 74 NWRRPEEEVSLLMQLFVRALREEVTKLDRNGVRLRVIGDLSRFEPDLRALIDVSEQRTAT 133
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NT L L +A NY R +I +A+ + + S ++ S +A +L P+PDL I
Sbjct: 134 NTRLVLTVAANYGGRWDILQAVNRL---LTSEPERRGELTESDLAPHLAMHYAPEPDLFI 190
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE+R+S+FLLWQ+AYSE F WP+F + F AL Y R+RRFG S++
Sbjct: 191 RTGGEQRISNFLLWQLAYSEIYFTDVLWPEFDSKAFDAALQSYQQRERRFGRTSEQ 246
>gi|167854831|ref|ZP_02477608.1| undecaprenyl pyrophosphate synthetase [Haemophilus parasuis 29755]
gi|167854010|gb|EDS25247.1| undecaprenyl pyrophosphate synthetase [Haemophilus parasuis 29755]
Length = 237
Score = 198 bits (504), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 100/228 (43%), Positives = 135/228 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG R GHRKG++ + V A GIK LT++AFS NW R
Sbjct: 9 PQHVAIIMDGNGRWAKQRGKLRVFGHRKGVKAVHSAVNFALTQGIKVLTLYAFSSENWSR 68
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EI+ L+ L L L NNI++++IG++ + + + ++ AE T NT L
Sbjct: 69 PKLEIAALMTLFIETLDLNIKKLHSNNIRLKIIGDKTAFSEALQEKIELAEQLTNKNTAL 128
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY + +I +A K I I++ + D+ + L T D P DL+IRT G
Sbjct: 129 TLNIAANYGGQWDIVQATKRIAHQIKNNVIPIEDITTDYFQHNLSTEDQPQVDLLIRTSG 188
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R+S+FLLWQ+AY+E VF P WPDF + F A+ Y RDRRFGG
Sbjct: 189 EQRISNFLLWQIAYAELVFSPVLWPDFDEKAFTDAVIAYQQRDRRFGG 236
>gi|225849451|ref|YP_002729616.1| di-trans,poly-cis-decaprenylcistransferase [Sulfurihydrogenibium
azorense Az-Fu1]
gi|225644497|gb|ACN99547.1| di-trans,poly-cis-decaprenylcistransferase [Sulfurihydrogenibium
azorense Az-Fu1]
Length = 234
Score = 198 bits (504), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 95/228 (41%), Positives = 143/228 (62%), Gaps = 8/228 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA RGL R GH++G++ + + A +VGIK LT+FAFS NW+R
Sbjct: 9 PNHVAIIMDGNGRWAKRRGLDRVYGHKEGVKAVEKTIKFAKKVGIKYLTLFAFSTENWQR 68
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P+ E++ ++ L+ ++ + L +N++K+ +G R L D +L +++ E +T + L
Sbjct: 69 PIDEVNTIMSLLVEYINEKIPMLLENDVKLIFMGRREGLWDSVLEAMEKGERETSQCSSL 128
Query: 131 NLFIAFNYSSRDEISRAIKNIFQ-DIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ IA NYS + EI A+ I + ++ES +D ++ ++PDPDL+IRT
Sbjct: 129 TVVIALNYSGKAEILDAVNKILKSNVES-------IDEESFRQFFYRPEIPDPDLLIRTS 181
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
GEKR+S+FLLWQ+AY+E F WPDF E F AL Y R+RRFG
Sbjct: 182 GEKRISNFLLWQLAYTELYFTDVLWPDFDEEEFLKALYDYQSRERRFG 229
>gi|146319618|ref|YP_001199330.1| undecaprenyl pyrophosphate synthase [Streptococcus suis 05ZYH33]
gi|145690424|gb|ABP90930.1| Undecaprenyl pyrophosphate synthase [Streptococcus suis 05ZYH33]
Length = 288
Score = 198 bits (504), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 102/237 (43%), Positives = 137/237 (57%), Gaps = 4/237 (1%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+S P HI +IMDGN R R PR GH+ ++ ++ A+++G+K LT++AFS
Sbjct: 52 ASEVPKHIVVIMDGNARLVIKRMQPRIMGHKAYMDALQKVTKTASDLGVKVLTVYAFSTE 111
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP E+ ++ L F K L NN+K+++IG+ L L L +AE +T+
Sbjct: 112 NWSRPEKEVKFIMNLPVEFYDKYVPELHANNVKIQMIGDHSKLPVPTLNALYKAEQKTKG 171
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DP 182
NTGL L A NY RDE++RA+ I QD+ D+D LIA YL T + DP
Sbjct: 172 NTGLILNFALNYGGRDEVTRAVNAIAQDVLDAKFNPGDIDEKLIADYLYTGTLSPTLRDP 231
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DL+IRT GE RLS+FL WQ AYSE F WPDF E A+ +YN R RRFGG+
Sbjct: 232 DLVIRTSGELRLSNFLPWQTAYSELYFTDIAWPDFDGEALKLAIKEYNRRHRRFGGV 288
>gi|121634061|ref|YP_974306.1| putative undecaprenyl diphosphate synthase [Neisseria meningitidis
FAM18]
gi|120865767|emb|CAM09496.1| putative undecaprenyl diphosphate synthase [Neisseria meningitidis
FAM18]
Length = 257
Score = 198 bits (503), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 99/240 (41%), Positives = 146/240 (60%), Gaps = 6/240 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + ++ P HI +IMDGNGRWA R LPR GH++G++ +V A++G++ LT+FA
Sbjct: 16 AVLEHTAIPKHIAVIMDGNGRWAKKRFLPRIMGHKRGLDALENMVKHCAKLGVQYLTVFA 75
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP E+S L+ L L+K L +NN++++++G+R + IL ++EAE
Sbjct: 76 FSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNMRLKILGSRERFNRQILQGIEEAEA 135
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTGL L IA +Y R +I +A + + S ++ +AK+L D P+P
Sbjct: 136 LTANNTGLTLSIAADYGGRWDILQAANKLIAEGVS------EITEDTLAKHLMLGDAPEP 189
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL IRTGGE R+S+FLLWQ+AY+E F WPDF A+ + R+RRFG S++
Sbjct: 190 DLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDETALDAAVASFQKRERRFGRTSEQ 249
>gi|167750046|ref|ZP_02422173.1| hypothetical protein EUBSIR_01014 [Eubacterium siraeum DSM 15702]
gi|167657067|gb|EDS01197.1| hypothetical protein EUBSIR_01014 [Eubacterium siraeum DSM 15702]
Length = 245
Score = 198 bits (503), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 98/229 (42%), Positives = 139/229 (60%), Gaps = 1/229 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+G IMDGNGRWA RGLPR AGH +G +VF V ++GIK T +AFS NW+R
Sbjct: 18 PLHVGFIMDGNGRWAKKRGLPRKAGHSQGAKVFRRTVEDCRDIGIKYCTFYAFSTENWKR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ ++KL+ +L S+ + N ++ +G++ + DDDI L E E+ ++ N GL
Sbjct: 78 PKDEVDAIMKLLVKYLDD-IRSMAQKNTRIIFLGDKSAFDDDIQARLVEIEEISKNNDGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ +A NY +DEI A K + +D + G V YL T +P DLIIR G
Sbjct: 137 YVLVALNYGGKDEILTAAKRLARDYKEGKVDLDGFTEDDFDNYLYTKGIPPVDLIIRPSG 196
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+R S+FL+WQ AY+E +F+ WPDFS++ A ++Y R+RRFGGL
Sbjct: 197 EQRTSNFLIWQGAYAELLFMDVLWPDFSKKDLIAACDEYARRNRRFGGL 245
>gi|227082380|ref|YP_002810931.1| undecaprenyl diphosphate synthase [Vibrio cholerae M66-2]
gi|298500369|ref|ZP_07010174.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae MAK
757]
gi|227010268|gb|ACP06480.1| undecaprenyl diphosphate synthase [Vibrio cholerae M66-2]
gi|297541062|gb|EFH77116.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae MAK
757]
Length = 256
Score = 198 bits (503), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 90/227 (39%), Positives = 141/227 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA A+G PR GH+ G+ + ++ +A +GIK +T+FAFS N RR
Sbjct: 18 PKHIAVIMDGNGRWAKAQGKPRVFGHKNGVAAVRKTISTSARLGIKAVTLFAFSSENRRR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L + L L KNN+++RVIG++ + + + +AE T NTG+
Sbjct: 78 PEEEVGVLMELFMTVLSTEIKKLHKNNLRLRVIGDKSRFSERLQTKIAQAEQLTASNTGM 137
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ IA NY + +I +A + + + + G + D+D + ++L +D+PD DL+IRT G
Sbjct: 138 VVNIAANYGGQWDILQATQALAEKVTQGELQPSDIDEDVFKQHLTMADLPDVDLLIRTSG 197
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+F+LWQ+AY+E F P +WP+F A+ + R+RRFG
Sbjct: 198 ECRISNFMLWQLAYAEMYFTPVFWPEFDENCLIEAVTWFVNRERRFG 244
>gi|226945937|ref|YP_002801010.1| undecaprenyl diphosphate synthase [Azotobacter vinelandii DJ]
gi|226720864|gb|ACO80035.1| undecaprenyl diphosphate synthase [Azotobacter vinelandii DJ]
Length = 251
Score = 198 bits (503), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 96/232 (41%), Positives = 147/232 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGN RWA R LP AGH+ G++ + EVG++ LT+FAFS NW+R
Sbjct: 13 PRHVAIIMDGNNRWAKKRLLPGIAGHKAGVDAVRATIEVCVEVGVEVLTLFAFSSENWQR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+S L++L + L++ L +N I +R+IG+R ++ ++EAE QT TGL
Sbjct: 73 PATEVSALMELFLTALRREARRLCENGICLRIIGDRSRFSPELQDAMREAELQTAGQTGL 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY + +I++A + + +++++G + D+ L+ L T D P PDL IRTGG
Sbjct: 133 LLQVAANYGGQWDIAQAAQRLAREVQAGQLQLDDITPQLLQSCLSTGDQPPPDLCIRTGG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
++R+S+FLLWQ+AY+E F +YWPDF ++ AL + R RRFG S++
Sbjct: 193 DRRISNFLLWQLAYAELYFTDQYWPDFRQDAMRRALVDFASRQRRFGKTSEQ 244
>gi|237740223|ref|ZP_04570704.1| undecaprenyl pyrophosphate synthetase [Fusobacterium sp. 2_1_31]
gi|229422240|gb|EEO37287.1| undecaprenyl pyrophosphate synthetase [Fusobacterium sp. 2_1_31]
Length = 230
Score = 198 bits (503), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 100/234 (42%), Positives = 141/234 (60%), Gaps = 7/234 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M + P HI IIMDGNGRWA RGL R GH +G + + E+G+K LT++AFS
Sbjct: 1 MEKNIPQHIAIIMDGNGRWAKKRGLARSFGHMEGAKSLRRALEYFTEIGVKYLTVYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+S L+KL ++K ++ KN I+ V G + ++ + +L +++ +++T+
Sbjct: 61 ENWSRPKDEVSTLMKLFLKYIKSERKNMMKNKIRFFVSGRKNNIPEKLLNEIEKLKEETK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N + L IAFNY SR EI A+ NI +D ++ +KYL +D PDPDL+
Sbjct: 121 NNDKITLNIAFNYGSRAEIIDAVNNIIKD------GKENITEEDFSKYL-YNDFPDPDLL 173
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRT GE R+S+FLLWQ+AYSE WPDF + A+ YN RDRRFGG+
Sbjct: 174 IRTSGEMRISNFLLWQIAYSELYITDTLWPDFDEKEIDKAIESYNQRDRRFGGV 227
>gi|73748218|ref|YP_307457.1| undecaprenyl diphosphate synthase [Dehalococcoides sp. CBDB1]
gi|73659934|emb|CAI82541.1| undecaprenyl diphosphate synthase [Dehalococcoides sp. CBDB1]
Length = 236
Score = 198 bits (503), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 100/238 (42%), Positives = 143/238 (60%), Gaps = 4/238 (1%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ ++++PPDHI IIMDGNGRWA RGL R GH+ G+E ++ + +G+K +T++
Sbjct: 3 TTATINNTPPDHIAIIMDGNGRWAERRGLSRLEGHKAGLENARRVIRHLSSLGVKYVTLY 62
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
+FS NW+RP +EI L LI + L NNI++R +G+ L + L+
Sbjct: 63 SFSTENWKRPDAEIKGLFGLINDVISSYIPELAGNNIRLRHLGHLDKLPAMLKHKLESLL 122
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T N+GL L +AF+Y RDEI +A+K + +D + + L A YL T+ +P+
Sbjct: 123 SETSQNSGLTLSLAFDYGGRDEIIQAVKKLVKD----RIEPDKISEELFAGYLFTTGIPE 178
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
LIIRTGGE RLS+FLLWQ AYSE F WPDF + A++ +N R RRFGGL
Sbjct: 179 AGLIIRTGGEIRLSNFLLWQSAYSELYFSEVMWPDFGEKEIDRAISAFNQRQRRFGGL 236
>gi|37524678|ref|NP_928022.1| undecaprenyl pyrophosphate synthetase [Photorhabdus luminescens
subsp. laumondii TTO1]
gi|42559747|sp|Q7N8P2|UPPS_PHOLL RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|36784103|emb|CAE12972.1| undecaprenyl pyrophosphate synthetase [Photorhabdus luminescens
subsp. laumondii TTO1]
Length = 254
Score = 198 bits (503), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 101/233 (43%), Positives = 142/233 (60%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+SS P H+ IIMDGNGRWA RG R GHR GI+ V+ +A+ I++LT++AFS
Sbjct: 12 LSSLLPKHVAIIMDGNGRWAKKRGKLRAFGHRAGIKAVRSAVSFSAKHNIESLTLYAFSS 71
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+S L++L L SL K+NI++ VIG+ + + + + T
Sbjct: 72 ENWNRPEQEVSSLMELFIFALDSEIKSLHKHNIRLSVIGDIGRFSERLQDRIHRSVKLTA 131
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
NTGL L IA NY R +I ++++ I Q I+ S+ D+ L+ Y++ S P DL+
Sbjct: 132 NNTGLQLNIAANYGGRWDIVQSVQKIAQQIKDNSLEQQDITEELVNNYMNLSQQPQVDLV 191
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
IRTGGE R+S+FLLWQ+AY+EF F WPDF +F A+N + R+RRFGG
Sbjct: 192 IRTGGEHRISNFLLWQIAYAEFYFTDILWPDFDENVFEGAINAFAKRERRFGG 244
>gi|42519368|ref|NP_965298.1| undecaprenyl pyrophosphate synthetase [Lactobacillus johnsonii NCC
533]
gi|268319255|ref|YP_003292911.1| undecaprenyl diphosphate synthase [Lactobacillus johnsonii FI9785]
gi|73920263|sp|Q74IR9|UPPS_LACJO RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|41583656|gb|AAS09264.1| undecaprenyl pyrophosphate synthetase [Lactobacillus johnsonii NCC
533]
gi|262397630|emb|CAX66644.1| undecaprenyl diphosphate synthase [Lactobacillus johnsonii FI9785]
gi|329667113|gb|AEB93061.1| undecaprenyl pyrophosphate synthetase [Lactobacillus johnsonii DPC
6026]
Length = 239
Score = 198 bits (503), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 99/234 (42%), Positives = 143/234 (61%), Gaps = 3/234 (1%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S P +H+ IIMDGNGRWA R LPR GHR G++ I AA ++GIK LT++AFS
Sbjct: 4 SKKPLNHLAIIMDGNGRWAKKRHLPRFVGHRHGMDNIRNIALAANKLGIKVLTLYAFSTE 63
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP E++ L++L F K L +NN++V ++G L + V ++A +T
Sbjct: 64 NWARPTDEVNYLMRLPIDFFDKFMPELMENNVRVNIMGFVDELPEKTYLVTQKAMAETAN 123
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP---DPD 183
NTG+ L AFNY SR EI+ ++ I + ++ G + D+ +++ +L T + DPD
Sbjct: 124 NTGMVLNFAFNYGSRREITAGVQEIARKVKVGEIDIDDISEKMVSDHLLTHSLAPYEDPD 183
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
L+IRT GE+RLS+FLLWQ+AY+EF F + WPDF + + Y R+RRFG
Sbjct: 184 LLIRTSGEERLSNFLLWQMAYTEFSFSDKLWPDFDKTDLEELVKDYQGRNRRFG 237
>gi|15676113|ref|NP_273244.1| undecaprenyl pyrophosphate synthetase [Neisseria meningitidis MC58]
gi|254805770|ref|YP_003083991.1| undecaprenyl pyrophosphate synthetase [Neisseria meningitidis
alpha14]
gi|42559884|sp|Q9K1G6|UPPS_NEIMB RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|7225405|gb|AAF40643.1| undecaprenyl pyrophosphate synthetase [Neisseria meningitidis MC58]
gi|254669312|emb|CBA08317.1| undecaprenyl pyrophosphate synthetase [Neisseria meningitidis
alpha14]
gi|261391722|emb|CAX49171.1| undecaprenyl pyrophosphate synthetase (UPP synthetase;
di-trans,poly-cis-decaprenylcistransferase; undecaprenyl
diphosphate synthase; UDS) [Neisseria meningitidis 8013]
gi|308388404|gb|ADO30724.1| putative undecaprenyl diphosphate synthase [Neisseria meningitidis
alpha710]
gi|316985711|gb|EFV64657.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
H44/76]
gi|325131043|gb|EGC53768.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis
OX99.30304]
gi|325133100|gb|EGC55772.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis M6190]
gi|325139078|gb|EGC61624.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis
ES14902]
gi|325141200|gb|EGC63700.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis CU385]
gi|325145383|gb|EGC67660.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis
M01-240013]
gi|325197473|gb|ADY92929.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis G2136]
gi|325199399|gb|ADY94854.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis H44/76]
gi|325202979|gb|ADY98433.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis
M01-240149]
gi|325205279|gb|ADZ00732.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis
M04-240196]
gi|325207223|gb|ADZ02675.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis
NZ-05/33]
Length = 248
Score = 198 bits (503), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 99/240 (41%), Positives = 147/240 (61%), Gaps = 6/240 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + ++ P HI +IMDGNGRWA R LPR GH++G++ +V A++G++ LT+FA
Sbjct: 7 AVLEHTAIPKHIAVIMDGNGRWAKKRFLPRIMGHKRGLDALENMVKHCAKLGVQYLTVFA 66
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP E+S L+ L L+K L +NN++++++G+R + IL ++EAE
Sbjct: 67 FSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNMRLKILGSRERFNRQILQGIEEAEA 126
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTGL L IA +Y R +I +A + + S ++ +AK+L D P+P
Sbjct: 127 LTANNTGLTLSIAADYGGRWDILQAANKLIAEGVS------EITEDTLAKHLMLGDAPEP 180
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL IRTGGE R+S+FLLWQ+AY+E F WPDF + A+ + R+RRFG S++
Sbjct: 181 DLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDGKALDDAVASFQKRERRFGRTSEQ 240
>gi|86134479|ref|ZP_01053061.1| Di-trans,poly-cis-decaprenylcistransferase [Polaribacter sp.
MED152]
gi|85821342|gb|EAQ42489.1| Di-trans,poly-cis-decaprenylcistransferase [Polaribacter sp.
MED152]
Length = 247
Score = 198 bits (503), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 99/232 (42%), Positives = 144/232 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G+ R GHR + E V AA++V ++ +T++AFS NW R
Sbjct: 13 PKHVAIIMDGNGRWAKGKGMNRIFGHRNALTAVRESVKAASQVNVEAITLYAFSTENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L+ + LKK K +KV IG+ +L VLK+ +TR NT +
Sbjct: 73 PKLEVDALMSLLINSLKKELPEFMKQGVKVNSIGSIDNLPSKAQKVLKDVIFETRNNTDI 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A +Y SR+EI AIKNI + + + + +D + I +L T ++PD DL+IRT G
Sbjct: 133 VLTFALSYGSREEIVNAIKNISKKVVNKELNLEKIDENTINNHLYTFNLPDVDLMIRTSG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FLLWQ+AY+E F WPDF +E F+ A+ +Y R+RRFG S++
Sbjct: 193 EQRISNFLLWQMAYAELYFTNVLWPDFRQEHFYDAIIEYQNRERRFGKTSEQ 244
>gi|296127608|ref|YP_003634860.1| undecaprenyl diphosphate synthase [Brachyspira murdochii DSM 12563]
gi|296019424|gb|ADG72661.1| undecaprenyl diphosphate synthase [Brachyspira murdochii DSM 12563]
Length = 238
Score = 198 bits (503), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 106/238 (44%), Positives = 144/238 (60%), Gaps = 3/238 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M+ + P H+ IIMDGNGRWA A R GHR G E IV A E+ IK LT++AFS
Sbjct: 1 MIEQNIPIHVAIIMDGNGRWAKAHNKSRSYGHRAGSENVINIVEACGELNIKYLTLYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED-- 122
NW+RP E L +L+K F KK L NNI V+ IG+ D + ++E E
Sbjct: 61 TENWKRPEEEKKALFRLLKEFYKKEIKRLISNNILVKHIGDISLFPKDTIKTIEETEKET 120
Query: 123 -QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ N L + +A NY RDE+ A+KNI ++++ + ++D + I YL T D+PD
Sbjct: 121 LEKCKNPILTVVLALNYGFRDELKNAVKNICYEVKNNKIDIENIDENFIQNYLYTKDMPD 180
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDLIIRT GE RLS+FL++Q +YSE F WPDFS+E F A+ +Y+ R+RR+GGL
Sbjct: 181 PDLIIRTSGEARLSNFLMYQASYSELYFTDILWPDFSKEDFKKAIEEYSNRNRRYGGL 238
>gi|126207898|ref|YP_001053123.1| undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae L20]
gi|165975874|ref|YP_001651467.1| undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|303249777|ref|ZP_07335981.1| undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|303252657|ref|ZP_07338820.1| undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|126096690|gb|ABN73518.1| undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|165875975|gb|ABY69023.1| undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|302648625|gb|EFL78818.1| undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|302651344|gb|EFL81496.1| undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
Length = 237
Score = 198 bits (503), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 99/228 (43%), Positives = 139/228 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R GH+ G++ V+ AA+ GIK LT++AFS NW R
Sbjct: 9 PQHVAIIMDGNGRWAKQQGKLRVFGHQNGVKAVRSAVSFAAKHGIKVLTLYAFSSENWSR 68
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+S L+ L L L KNNI++ +IGN+ + + + + E+E T NTGL
Sbjct: 69 PEAEVSALMALFMRALDSEVKKLHKNNIRLNIIGNKSAFSESLQKRIAESEKLTENNTGL 128
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY S +I++A + + ++ G + D+ + L T P DL+IRT G
Sbjct: 129 ILNIAANYGSHWDITQAAQQLAIKVKLGEITVSDITPERLQNALVTGTQPLVDLLIRTSG 188
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R+S+FLLWQ+AY+E VF P WPDF+ + F A+ Y RDRRFGG
Sbjct: 189 EQRISNFLLWQIAYAELVFSPVLWPDFNDDSFSEAIIAYQQRDRRFGG 236
>gi|114048196|ref|YP_738746.1| undecaprenyl pyrophosphate synthetase [Shewanella sp. MR-7]
gi|113889638|gb|ABI43689.1| Undecaprenyl pyrophosphate synthetase [Shewanella sp. MR-7]
Length = 275
Score = 198 bits (503), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 91/237 (38%), Positives = 148/237 (62%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ S P H+ IIMDGNGRWA +G PR GH+ G++ V+AA+++GI++LT+
Sbjct: 27 VLPELVKQSLPKHVAIIMDGNGRWAQTQGKPRVMGHKAGVKAVRRAVSAASQLGIQSLTL 86
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NWRRP E+S L++L + L++ L KN +++ +IG+ + ++ A
Sbjct: 87 FAFSSENWRRPDKEVSLLMELFFTVLQREIKLLDKNQVRLNIIGDISRFSARLQKQIRAA 146
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E++T N GL L +A NY R +I +A + + + +E+G + S ++++L +
Sbjct: 147 EEKTASNNGLILNVAANYGGRWDILQAAQKLAEKVETGEMTSSQFTEEALSEHLCMQNQS 206
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+ DL+IRTGG+ R+S+F+LWQ AY+E VF+ WPDF + F A+ + R RRFG
Sbjct: 207 EVDLMIRTGGDYRISNFVLWQAAYAELVFLDTLWPDFDEQAFHEAIATFASRQRRFG 263
>gi|257066101|ref|YP_003152357.1| undecaprenyl diphosphate synthase [Anaerococcus prevotii DSM 20548]
gi|256797981|gb|ACV28636.1| undecaprenyl diphosphate synthase [Anaerococcus prevotii DSM 20548]
Length = 232
Score = 198 bits (503), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 96/230 (41%), Positives = 139/230 (60%), Gaps = 4/230 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I++DGNGRWA + +PR GH+ G E +I A + G+K +T++AFS NW+R
Sbjct: 7 PTHVAIVLDGNGRWAKKKHMPRTYGHKNGAENVVDICLYAKKRGVKYMTLYAFSTENWKR 66
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P+ E++ L+KL+ F++ L K N K+ IG+ L + A + T+ N +
Sbjct: 67 PLEEVNYLMKLVIKFIESKLDILMKENCKLNFIGDLEKLPASTKEICIRAMEDTKDNDEI 126
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY RDEI A K + D + D+ +I+ YL T D PDPDL+IR GG
Sbjct: 127 TLNIALNYGGRDEIVHAFKAMMDD----GISKEDITEEMISSYLYTKDQPDPDLLIRPGG 182
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E RLS+FL++Q+AY+EF F WPDF R+ F AL +++ R+RR+G LS
Sbjct: 183 ELRLSNFLIYQLAYAEFYFTDTLWPDFDRKAFDEALEEFSRRNRRYGALS 232
>gi|77457332|ref|YP_346837.1| undecaprenyl pyrophosphate synthetase [Pseudomonas fluorescens
Pf0-1]
gi|77381335|gb|ABA72848.1| undecaprenyl pyrophosphate synthetase [Pseudomonas fluorescens
Pf0-1]
Length = 251
Score = 198 bits (503), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 95/235 (40%), Positives = 142/235 (60%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S+ P H+ IIMDGN RWA R +P AGH+ G++ ++ AE ++ LT+FAFS N
Sbjct: 10 STVPRHVAIIMDGNNRWAKKRFMPGVAGHKAGVDAVRAVIEVCAEAKVEVLTLFAFSSEN 69
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W+RP E+S L+ L L++ L NNI +R+IG+R ++ ++EAE T
Sbjct: 70 WQRPADEVSALMDLFFKALRREAKRLNDNNISLRIIGDRTRFHPELQAAMREAEAMTAGA 129
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L IA NY + +I++A + + +++++G + D+ L+ L T D+P PDL IR
Sbjct: 130 NRFILQIAANYGGQWDIAQAAQRLAREVQAGHLRPEDITPDLLQTCLVTGDLPLPDLCIR 189
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE R+S+FLLWQ+AY+E F +WPDF E +AL + LR RRFG S++
Sbjct: 190 TGGEHRISNFLLWQLAYAELYFSDLFWPDFKHEAMRNALVDFALRQRRFGKTSEQ 244
>gi|34497655|ref|NP_901870.1| undecaprenyl pyrophosphate synthetase [Chromobacterium violaceum
ATCC 12472]
gi|42559751|sp|Q7NVZ0|UPPS_CHRVO RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|34103511|gb|AAQ59873.1| undecaprenyl pyrophosphate synthetase [Chromobacterium violaceum
ATCC 12472]
Length = 251
Score = 198 bits (503), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 100/234 (42%), Positives = 140/234 (59%), Gaps = 6/234 (2%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
PP HI IIMDGNGRWA R LPR AGH++G++ E+V A E+G+ LT+FAFS NW
Sbjct: 14 EPPRHIAIIMDGNGRWAKKRFLPRVAGHKRGLDAVREVVKACKEMGVGYLTLFAFSTENW 73
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RRP E+S L+ L L+ L NNI+++V+G+R ++ + AE +T N
Sbjct: 74 RRPQEEVSFLMDLFLRALEHEVAKLHNNNIRLKVLGSRERFSAELSERIDRAEAKTAGND 133
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL L IA +Y R +I A+ + + S ++ ++ L + P+PDL IRT
Sbjct: 134 GLVLTIAADYGGRWDIVHAVNRLIAEGRS------EITEEMVTDRLGMAWAPEPDLFIRT 187
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GGE+R+S+FLLWQ+AYSE F WPDF R A++ Y R+RRFG S++
Sbjct: 188 GGEQRISNFLLWQLAYSELYFTDLLWPDFDRAALQEAIHSYWQRERRFGRTSEQ 241
>gi|46143268|ref|ZP_00135561.2| COG0020: Undecaprenyl pyrophosphate synthase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|190149707|ref|YP_001968232.1| undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|307245246|ref|ZP_07527337.1| Undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307249637|ref|ZP_07531623.1| Undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|307251965|ref|ZP_07533866.1| Undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307254193|ref|ZP_07536038.1| Undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307260889|ref|ZP_07542575.1| Undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|307263016|ref|ZP_07544638.1| Undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|189914838|gb|ACE61090.1| undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|306853890|gb|EFM86104.1| Undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306858335|gb|EFM90405.1| Undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|306860657|gb|EFM92669.1| Undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306862893|gb|EFM94842.1| Undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306869456|gb|EFN01247.1| Undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|306871642|gb|EFN03364.1| Undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 230
Score = 197 bits (502), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 99/228 (43%), Positives = 139/228 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R GH+ G++ V+ AA+ GIK LT++AFS NW R
Sbjct: 2 PQHVAIIMDGNGRWAKQQGKLRVFGHQNGVKAVRSAVSFAAKHGIKVLTLYAFSSENWSR 61
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+S L+ L L L KNNI++ +IGN+ + + + + E+E T NTGL
Sbjct: 62 PEAEVSALMALFMRALDSEVKKLHKNNIRLNIIGNKSAFSESLQKRIAESEKLTENNTGL 121
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY S +I++A + + ++ G + D+ + L T P DL+IRT G
Sbjct: 122 ILNIAANYGSHWDITQAAQQLAIKVKLGEITVSDITPERLQNALVTGTQPLVDLLIRTSG 181
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R+S+FLLWQ+AY+E VF P WPDF+ + F A+ Y RDRRFGG
Sbjct: 182 EQRISNFLLWQIAYAELVFSPVLWPDFNDDSFSEAIIAYQQRDRRFGG 229
>gi|332877974|ref|ZP_08445705.1| di-trans,poly-cis-decaprenylcistransferase [Capnocytophaga sp. oral
taxon 329 str. F0087]
gi|332684078|gb|EGJ56944.1| di-trans,poly-cis-decaprenylcistransferase [Capnocytophaga sp. oral
taxon 329 str. F0087]
Length = 240
Score = 197 bits (502), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 95/238 (39%), Positives = 144/238 (60%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M + P+H+ IIMDGNGRWA +GL R GH KG + +++ E I LT++AFS
Sbjct: 1 MEITKYPEHLAIIMDGNGRWAKKQGLLRALGHEKGGQSVRQVLEYCVEHHIPYLTLYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP E+ L++L+ FL+K L KNN+++ +IGN + + L D+
Sbjct: 61 TENWNRPALEVKALMELLVKFLRKEADELDKNNVRLNMIGNLERFPEKVKNTLVGVIDRL 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NTG L +A +Y +R+E+ IK I Q +E + ++ +I ++L T D+P+ DL
Sbjct: 121 KHNTGTTLTLALSYGAREELLTTIKRIAQQVEQQQLKVDAINEDIIQQHLYTYDLPNVDL 180
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IRT GE R+S+FLLWQ+AY+E F WPDF+++ AL Y R+RRFG +S++
Sbjct: 181 LIRTSGEYRISNFLLWQIAYAELYFTDVLWPDFTKKHLEEALISYQNRERRFGKISEQ 238
>gi|260772226|ref|ZP_05881142.1| undecaprenyl pyrophosphate synthetase [Vibrio metschnikovii CIP
69.14]
gi|260611365|gb|EEX36568.1| undecaprenyl pyrophosphate synthetase [Vibrio metschnikovii CIP
69.14]
Length = 232
Score = 197 bits (502), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 92/220 (41%), Positives = 142/220 (64%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA A+G PR GH+ G+ + V+ AA++GI+ +T+FAFS NWRRP E+
Sbjct: 1 MDGNGRWAKAQGKPRIFGHKNGVAAVRKTVSTAAKLGIRAVTLFAFSSENWRRPEEEVGV 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L L L KNN+++R+IG+ + + + +AE T+ NTG+ + IA N
Sbjct: 61 LMELFLRVLSTEVKKLHKNNLRLRIIGDTSRFSERLQSKIAQAEALTQHNTGMVINIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y + +I++A+++I I + D++ +LIA++L +D+P+ DL+IRT GE R+S+F
Sbjct: 121 YGGKWDITQAMRHIALKISRDELSVTDINETLIAEHLTMADLPEVDLLIRTSGECRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
LLWQ+AY+E F P YWP+F E A+ + R+RRFG
Sbjct: 181 LLWQLAYAEMYFTPVYWPEFGEESLIEAVTWFVNRERRFG 220
>gi|330950677|gb|EGH50937.1| undecaprenyl diphosphate synthase [Pseudomonas syringae Cit 7]
Length = 251
Score = 197 bits (502), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 93/241 (38%), Positives = 145/241 (60%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ M+ S P H+ IIMDGN RWA R LP AGH+ G++ ++ AE ++ LT+F
Sbjct: 4 IKPAMTPSVPRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAEARVEVLTLF 63
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E+ L++L + L++ L +N I +R+IG+R ++ ++EAE
Sbjct: 64 AFSSENWQRPAEEVGALMELFFTALRRETKRLNENEISLRIIGDRSRFHPELQAAMREAE 123
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T + L IA NY + +I++A + + +++++G + D+ L+ L T D+P
Sbjct: 124 VRTSGTSRFVLQIAANYGGQWDIAQAAQRLAREVQAGHLQPEDITPQLLQTCLATGDLPL 183
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL IRTGGE R+S+FLLWQ+AY+E F +WPDF + AL + R RRFG S+
Sbjct: 184 PDLCIRTGGEHRISNFLLWQLAYAELYFSDLFWPDFKHDAMRAALADFASRQRRFGKTSE 243
Query: 242 K 242
+
Sbjct: 244 Q 244
>gi|325963336|ref|YP_004241242.1| undecaprenyl pyrophosphate synthetase [Arthrobacter
phenanthrenivorans Sphe3]
gi|323469423|gb|ADX73108.1| Undecaprenyl pyrophosphate synthetase [Arthrobacter
phenanthrenivorans Sphe3]
Length = 275
Score = 197 bits (502), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 95/228 (41%), Positives = 138/228 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I+MDGNGRWA RGLPR GH+ G +++A A E+GI+ ++++AFS NWRR
Sbjct: 38 PRHVAIVMDGNGRWANQRGLPRIEGHKAGEPALLDVMAGAIELGIEYVSVYAFSTENWRR 97
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ K L++ L + ++VR G R L ++ L+EAE+ T N+
Sbjct: 98 SPEEVRFLMGFNKDVLRRQRNQLDEWGVRVRWSGRRPRLWGSVIRELEEAEEFTAGNSTC 157
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R EI+ A+ I ++ +G + + I KYLD D+PD DL +R+ G
Sbjct: 158 TLTMCVNYGGRAEITDAVSAIAAEVAAGRLKPGAITERTIQKYLDEPDLPDVDLFLRSSG 217
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+RLS+FLLWQ AY+EFVF+ WPD R + A+ +Y RDRR+GG
Sbjct: 218 EQRLSNFLLWQSAYAEFVFMDTLWPDVDRRTLWAAVEEYAQRDRRYGG 265
>gi|237742319|ref|ZP_04572800.1| undecaprenyl pyrophosphate synthetase [Fusobacterium sp. 4_1_13]
gi|229429967|gb|EEO40179.1| undecaprenyl pyrophosphate synthetase [Fusobacterium sp. 4_1_13]
Length = 230
Score = 197 bits (502), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 98/234 (41%), Positives = 141/234 (60%), Gaps = 7/234 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M + P+HI IIMDGNGRWA RGL R GH +G + + + E+G+K LT++AFS
Sbjct: 1 MKKNVPNHIAIIMDGNGRWAKKRGLARSFGHMEGAKTLRKALEYLTEIGVKYLTVYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+S L+KL ++K ++ KN I+ V G + ++ + + +++ E++T+
Sbjct: 61 ENWNRPQDEVSTLMKLFLKYIKSERKNMMKNKIRFFVSGRKNNVPEKLQKEIEKLEEETK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N + L IAFNY SR EI A+ I +D ++ +KYL +D PDPDL+
Sbjct: 121 NNNKITLNIAFNYGSRAEIVDAVNKIIKD------GKENITEKDFSKYL-YNDFPDPDLV 173
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRT GE R+S+FLLWQ+AYSE WPDF + A+ YN R+RRFGG+
Sbjct: 174 IRTSGEMRISNFLLWQIAYSELYITDTLWPDFDEKEIDKAIESYNQRERRFGGV 227
>gi|330993377|ref|ZP_08317312.1| Undecaprenyl pyrophosphate synthase [Gluconacetobacter sp. SXCC-1]
gi|329759407|gb|EGG75916.1| Undecaprenyl pyrophosphate synthase [Gluconacetobacter sp. SXCC-1]
Length = 253
Score = 197 bits (502), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 98/230 (42%), Positives = 136/230 (59%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+S P H+ IIMDGNGRWA+ RGLP AGHR G + V AA G+ +T++AFS N
Sbjct: 20 ASLPGHVAIIMDGNGRWASTRGLPLLAGHRAGADAVQRTVRAAISRGVGWVTLYAFSSEN 79
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRR E+++L L++ +L+ L + + +R IG+ DI + AE T N
Sbjct: 80 WRRAPGEVADLTGLLRYYLRHKVAELSREGVCLRFIGDLARFPVDIQEEARRAETVTAAN 139
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T L L +A +Y R +I +A + Q + G + D+D + A L T+ +PDPDL++R
Sbjct: 140 TRLVLVLALSYGGRADIVQAAIRLAQAVGRGERAATDIDEATFAGALLTAGMPDPDLVVR 199
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
T GE RLS+FLLWQ AY+E VF+ WPDF F LN Y+ R+RRFG
Sbjct: 200 TSGECRLSNFLLWQSAYAELVFLDTPWPDFDETHFDTVLNIYSRRERRFG 249
>gi|168000533|ref|XP_001752970.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695669|gb|EDQ82011.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 253
Score = 197 bits (502), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 99/233 (42%), Positives = 140/233 (60%), Gaps = 3/233 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P H+ IIMDGN RWA RGLP GH G+ E+V A GIK L++FAFS N
Sbjct: 18 SKIPKHVAIIMDGNSRWAERRGLPASMGHEAGVRSLKEVVKLANTWGIKVLSVFAFSTEN 77
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP +E+ L+ L ++ LK SL K N++V +G+ L D + ++ +++T+ N
Sbjct: 78 WLRPKAEVDFLMLLFENVLKDELSSLAKENVRVHCMGDLTLLPDSLKNLVSALDERTKNN 137
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS---DVPDPDL 184
TGL IA +YS R++I+ A + + +E+G + S D+ ++ + L TS + DPDL
Sbjct: 138 TGLKFCIALSYSGRNDIANACQRLAAKVEAGELSSSDITETMFEEELKTSWLGEERDPDL 197
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+IRT E+R+S+FLLWQ AY+EF F+ WPDF F AL Y R RRFG
Sbjct: 198 LIRTSEEQRISNFLLWQSAYTEFYFVDSLWPDFGVAQFKEALLTYQNRSRRFG 250
>gi|315038581|ref|YP_004032149.1| undecaprenyl pyrophosphate synthase [Lactobacillus amylovorus GRL
1112]
gi|325957055|ref|YP_004292467.1| undecaprenyl pyrophosphate synthase [Lactobacillus acidophilus
30SC]
gi|312276714|gb|ADQ59354.1| undecaprenyl pyrophosphate synthase [Lactobacillus amylovorus GRL
1112]
gi|325333620|gb|ADZ07528.1| undecaprenyl pyrophosphate synthase [Lactobacillus acidophilus
30SC]
gi|327183778|gb|AEA32225.1| undecaprenyl pyrophosphate synthase [Lactobacillus amylovorus GRL
1118]
Length = 244
Score = 197 bits (502), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 101/229 (44%), Positives = 143/229 (62%), Gaps = 3/229 (1%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+H+ IIMDGNGRWA R PR GHR+G++ I AA ++GIK LT++AFS NW RP
Sbjct: 9 NHLAIIMDGNGRWAKKRHKPRFVGHREGMDNVERITLAADKLGIKVLTLYAFSTENWARP 68
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E++ L+ L F K +L +NN+KV ++G L + +++ A +T NTGL
Sbjct: 69 KEEVAYLMNLPVRFFDKYMPTLMENNVKVNIMGYLDELPEKTYQIVQRAMAETANNTGLV 128
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT---SDVPDPDLIIRT 188
L AFNY SR EI+ A++ I IE+G + S D+ +I+ +L T DPDL+IRT
Sbjct: 129 LNFAFNYGSRREITSAMQEIGGLIEAGELKSEDITEKMISDHLMTGHFGKYQDPDLLIRT 188
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
GE+R+S+FLLWQ+AYSE F + WPDF + +N++ R+RRFG
Sbjct: 189 SGEQRISNFLLWQLAYSELAFSDKNWPDFDADDLKQFVNEFKHRNRRFG 237
>gi|206900891|ref|YP_002250922.1| di-trans,poly-cis-decaprenylcistransferase [Dictyoglomus
thermophilum H-6-12]
gi|206739994|gb|ACI19052.1| di-trans,poly-cis-decaprenylcistransferase [Dictyoglomus
thermophilum H-6-12]
Length = 244
Score = 197 bits (502), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 102/230 (44%), Positives = 137/230 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IMDGNGRWA R LPR GHR+G V +I A GI LT FAFS NW+R
Sbjct: 12 PKHIAFIMDGNGRWAKERNLPRLMGHREGALVVEKISEIAFNWGINYLTFFAFSTENWKR 71
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL+ + K L +N IK++VIGN L + + +K ++T+
Sbjct: 72 PREEVEGLMKLLDESIDKFKDKLIENKIKLKVIGNIEELPNYLQRRIKYVIEETKTGEDK 131
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I +A+K I + + D++ SL + +L T D+P+PDL+IRT G
Sbjct: 132 VLTIALNYGGRWDILQAVKRIALQVRDNKLQIEDINESLFSSFLSTFDLPEPDLLIRTSG 191
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E R+S+FLLWQ+AY+E F P+YWPDF+ E A + R RRFGGL
Sbjct: 192 EYRISNFLLWQIAYTELWFTPKYWPDFNEEDLKKACLDFAQRKRRFGGLE 241
>gi|113970972|ref|YP_734765.1| undecaprenyl pyrophosphate synthetase [Shewanella sp. MR-4]
gi|117921252|ref|YP_870444.1| undecaprenyl pyrophosphate synthetase [Shewanella sp. ANA-3]
gi|113885656|gb|ABI39708.1| Undecaprenyl pyrophosphate synthetase [Shewanella sp. MR-4]
gi|117613584|gb|ABK49038.1| Undecaprenyl pyrophosphate synthetase [Shewanella sp. ANA-3]
Length = 275
Score = 197 bits (502), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 91/237 (38%), Positives = 149/237 (62%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ S P H+ IIMDGNGRWA +G PR GH+ G++ V+AA+++GI++LT+
Sbjct: 27 VLPELVKQSLPKHVAIIMDGNGRWAQTQGKPRVMGHKAGVKAVRRAVSAASQLGIQSLTL 86
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NWRRP E+S L++L + L++ L KN +++ +IG+ + ++ A
Sbjct: 87 FAFSSENWRRPDKEVSLLMELFFTVLQREIKLLDKNQVRLNIIGDISRFSARLQKQIRAA 146
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E++T N+GL L +A NY R +I +A + + + +E+G + S ++++L +
Sbjct: 147 EEKTAGNSGLILNVAANYGGRWDILQAAQKLAEKVENGEMTSSQFTEEALSEHLCMQNQS 206
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+ DL+IRTGG+ R+S+F+LWQ AY+E VF+ WPDF + F A+ + R RRFG
Sbjct: 207 EVDLMIRTGGDYRISNFVLWQAAYAELVFMDTLWPDFDEQAFHEAIATFASRQRRFG 263
>gi|123966416|ref|YP_001011497.1| undecaprenyl pyrophosphate synthetase [Prochlorococcus marinus str.
MIT 9515]
gi|123200782|gb|ABM72390.1| Undecaprenyl pyrophosphate synthetase (UPPS) [Prochlorococcus
marinus str. MIT 9515]
Length = 267
Score = 197 bits (502), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 95/229 (41%), Positives = 134/229 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA+ +GLPR GH KG+ V EI+ + + + LT++AFS NW R
Sbjct: 24 PKHIAIIMDGNGRWASKKGLPRSFGHNKGVNVLKEIIKVSKNLDCQVLTVYAFSTENWTR 83
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L+ L + LKK + + +IK++ IG+ + ++ +E T+ N
Sbjct: 84 PSTEVDFLINLFEKVLKKEITEIHQESIKIKFIGDLSPFPKALKSIINSSETLTKNNKNF 143
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L I NY R EI +A + I +G + ++D L L T + DP+L+IRT G
Sbjct: 144 TLNICVNYGGRQEIVKAAREIAIKSLAGEIKPSEIDEQLFNSQLLTHGIKDPELLIRTSG 203
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
EKR+S+FLLWQ+AYSE WPDF+ FF A+ Y RDRRFGG+
Sbjct: 204 EKRISNFLLWQLAYSEIYITDVLWPDFNEIEFFKAIIDYQSRDRRFGGI 252
>gi|91792915|ref|YP_562566.1| undecaprenyl diphosphate synthase [Shewanella denitrificans OS217]
gi|91714917|gb|ABE54843.1| Undecaprenyl pyrophosphate synthetase [Shewanella denitrificans
OS217]
Length = 271
Score = 197 bits (502), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 94/229 (41%), Positives = 143/229 (62%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P H+ IIMDGNGRWA +G PR GH+ G++ V+ A+++GI +LT+FAFS NW
Sbjct: 31 SLPKHVAIIMDGNGRWAQQQGKPRVMGHKAGVKAVRRAVSCASQLGIASLTLFAFSSENW 90
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RRP E+S L++L S L++ L KN +++ +IG+ + + + EA+ +T NT
Sbjct: 91 RRPDKEVSLLMELFFSVLQREIKLLHKNQVRLNIIGDISRFSERLQKQIHEAQRKTADNT 150
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL L +A NY R +I +A + + Q +ESG + S + ++ +L + + DL+IRT
Sbjct: 151 GLILNVAANYGGRWDILQAAQKLAQQVESGEINSSQMTEEALSAHLCMQNQSEVDLMIRT 210
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
GG+ R+S+F+LWQ AY+E VF WPDF+ + F A+ + R RRFG
Sbjct: 211 GGDCRISNFILWQAAYAELVFTDTLWPDFNEQAFRDAIALFASRQRRFG 259
>gi|297538507|ref|YP_003674276.1| undecaprenyl diphosphate synthase [Methylotenera sp. 301]
gi|297257854|gb|ADI29699.1| undecaprenyl diphosphate synthase [Methylotenera sp. 301]
Length = 252
Score = 197 bits (502), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 98/236 (41%), Positives = 143/236 (60%), Gaps = 3/236 (1%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
++ P HI +IMDGNGRWA R LPR AGH++G+E ++V + ++ LT+FAFS
Sbjct: 14 AAETPKHIAVIMDGNGRWARKRFLPRVAGHKRGVETVRDLVKYCVTLKVEYLTLFAFSSE 73
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+S L+ L LK+ L +NNIK+ +IG+R D +++ ++ +E T
Sbjct: 74 NWRRPTEEVSYLMGLFMHALKREVAKLHQNNIKLIMIGDRSRFDAELVAQIEASEQLTAS 133
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTGL L IA NY R ++ +A+ + + + + + L +L S P+PDL I
Sbjct: 134 NTGLVLTIAANYGGRWDVLQAVNKM--QLAAPQLTGFYREDHL-TPHLSMSYAPEPDLFI 190
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE R+S+FLLWQ+AY+E F WPDF+ F A+ Y R+RRFG S++
Sbjct: 191 RTGGETRISNFLLWQLAYTELYFTDTLWPDFNEAAFNLAIQSYQNRERRFGRTSEQ 246
>gi|325129105|gb|EGC51954.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis N1568]
Length = 248
Score = 197 bits (502), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 99/240 (41%), Positives = 145/240 (60%), Gaps = 6/240 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + ++ P HI +IMDGNGRWA R LPR GH++G++ +V A++G++ LT+FA
Sbjct: 7 AVLEHTAIPKHIAVIMDGNGRWAKKRFLPRIMGHKRGLDALENMVKHCAKLGVQYLTVFA 66
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP E+S L+ L L+K L +NN++++++G+R IL ++EAE
Sbjct: 67 FSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNMRLKILGSRERFSRQILKGIEEAEA 126
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTGL L IA +Y R +I +A + + S ++ +AK+L D P+P
Sbjct: 127 LTANNTGLTLSIAADYGGRWDILQAANKLIAEGVS------EITEDTLAKHLMLGDAPEP 180
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL IRTGGE R+S+FLLWQ+AY+E F WPDF A+ + R+RRFG S++
Sbjct: 181 DLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDETALDAAVASFQKRERRFGRTSEQ 240
>gi|46445955|ref|YP_007320.1| undecaprenyl pyrophosphate synthetase [Candidatus Protochlamydia
amoebophila UWE25]
gi|46399596|emb|CAF23045.1| probable undecaprenyl pyrophosphate synthetase [Candidatus
Protochlamydia amoebophila UWE25]
Length = 258
Score = 197 bits (502), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 99/238 (41%), Positives = 141/238 (59%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ S+ S P HI II DGN RWA R GHR+G ++ E V AA E+GIK +T +
Sbjct: 21 LESLNFSRIPQHIAIIPDGNRRWARKRLSSSNEGHREGADILMETVKAAKELGIKAITFY 80
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
FS NW R EIS L+ L S+L + S+ +N IK+ IG L + + LKE +
Sbjct: 81 TFSTENWSRSFDEISALMLLFASYLSEQCDSMIQNGIKLETIGELDPLPEFLKDTLKETK 140
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T ++L +A NY SR+E+ RA I ++E G++ +V+ + IA+YLDT PD
Sbjct: 141 KATCACDQIDLILAMNYGSRNELQRAFTRILDEVEQGNLKKEEVNETTIAQYLDTHQWPD 200
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
P+L+IRT GE R+S+FLLWQ++Y+E P WPDF+ A+ Y R+RR+GG+
Sbjct: 201 PELLIRTSGEMRISNFLLWQISYTEIYIAPVLWPDFTPNHLLEAIVDYQKRERRWGGV 258
>gi|256027753|ref|ZP_05441587.1| undecaprenyl pyrophosphate synthetase [Fusobacterium sp. D11]
gi|289765710|ref|ZP_06525088.1| undecaprenyl pyrophosphate synthetase [Fusobacterium sp. D11]
gi|289717265|gb|EFD81277.1| undecaprenyl pyrophosphate synthetase [Fusobacterium sp. D11]
Length = 230
Score = 197 bits (501), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 98/234 (41%), Positives = 142/234 (60%), Gaps = 7/234 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M + P+HI IIMDGNGRWA RGL R GH +G ++ + + E+G+K LT++AFS
Sbjct: 1 MEKNIPNHIAIIMDGNGRWAKKRGLARSFGHMEGAKILRKALEYLTEIGVKYLTVYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+S L+KL ++K ++ KN I+ V G + ++ + + +++ E++T+
Sbjct: 61 ENWNRPQDEVSTLMKLFLKYIKSERKNMMKNKIRFFVSGRKNNVPEKLQKEIEKLEEETK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N + L IAFNY SR EI A+ I +D ++ +KYL +D PDPDL+
Sbjct: 121 NNDKITLNIAFNYGSRAEIVDAVNRIIKD------GKENITEEDFSKYL-YNDFPDPDLV 173
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRT GE R+S+FLLWQ+AYSE WPDF + A+ YN R+RRFGG+
Sbjct: 174 IRTSGEMRVSNFLLWQIAYSELYITDTLWPDFDEKEIDKAIESYNQRERRFGGV 227
>gi|59802115|ref|YP_208827.1| putative undecaprenyl diphosphate synthase [Neisseria gonorrhoeae
FA 1090]
gi|194099963|ref|YP_002003102.1| putative undecaprenyl diphosphate synthase [Neisseria gonorrhoeae
NCCP11945]
gi|239997971|ref|ZP_04717895.1| putative undecaprenyl diphosphate synthase [Neisseria gonorrhoeae
35/02]
gi|240015051|ref|ZP_04721964.1| putative undecaprenyl diphosphate synthase [Neisseria gonorrhoeae
DGI18]
gi|240017500|ref|ZP_04724040.1| putative undecaprenyl diphosphate synthase [Neisseria gonorrhoeae
FA6140]
gi|240081640|ref|ZP_04726183.1| putative undecaprenyl diphosphate synthase [Neisseria gonorrhoeae
FA19]
gi|240113921|ref|ZP_04728411.1| putative undecaprenyl diphosphate synthase [Neisseria gonorrhoeae
MS11]
gi|240116654|ref|ZP_04730716.1| putative undecaprenyl diphosphate synthase [Neisseria gonorrhoeae
PID18]
gi|240118876|ref|ZP_04732938.1| putative undecaprenyl diphosphate synthase [Neisseria gonorrhoeae
PID1]
gi|240122120|ref|ZP_04735082.1| putative undecaprenyl diphosphate synthase [Neisseria gonorrhoeae
PID24-1]
gi|240124413|ref|ZP_04737369.1| putative undecaprenyl diphosphate synthase [Neisseria gonorrhoeae
PID332]
gi|240124715|ref|ZP_04737601.1| putative undecaprenyl diphosphate synthase [Neisseria gonorrhoeae
SK-92-679]
gi|240129090|ref|ZP_04741751.1| putative undecaprenyl diphosphate synthase [Neisseria gonorrhoeae
SK-93-1035]
gi|254494675|ref|ZP_05107846.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae 1291]
gi|260439587|ref|ZP_05793403.1| putative undecaprenyl diphosphate synthase [Neisseria gonorrhoeae
DGI2]
gi|268599985|ref|ZP_06134152.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae MS11]
gi|268602322|ref|ZP_06136489.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae PID18]
gi|268604585|ref|ZP_06138752.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae PID1]
gi|268683042|ref|ZP_06149904.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae
PID332]
gi|268683290|ref|ZP_06150152.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae
SK-92-679]
gi|268687471|ref|ZP_06154333.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae
SK-93-1035]
gi|291042823|ref|ZP_06568564.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae DGI2]
gi|293398156|ref|ZP_06642361.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria gonorrhoeae
F62]
gi|73920269|sp|Q5F5X2|UPPS_NEIG1 RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|59719010|gb|AAW90415.1| putative undecaprenyl diphosphate synthase [Neisseria gonorrhoeae
FA 1090]
gi|193935253|gb|ACF31077.1| putative undecaprenyl diphosphate synthase [Neisseria gonorrhoeae
NCCP11945]
gi|226513715|gb|EEH63060.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae 1291]
gi|268584116|gb|EEZ48792.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae MS11]
gi|268586453|gb|EEZ51129.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae PID18]
gi|268588716|gb|EEZ53392.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae PID1]
gi|268623326|gb|EEZ55726.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae
PID332]
gi|268623574|gb|EEZ55974.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae
SK-92-679]
gi|268627755|gb|EEZ60155.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae
SK-93-1035]
gi|291013257|gb|EFE05223.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae DGI2]
gi|291611419|gb|EFF40489.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria gonorrhoeae
F62]
gi|317165415|gb|ADV08956.1| putative undecaprenyl diphosphate synthase [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 248
Score = 197 bits (501), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 98/235 (41%), Positives = 144/235 (61%), Gaps = 6/235 (2%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
++ P HI +IMDGNGRWA R LPR GH++G++ +V A++G++ LT+FAFS N
Sbjct: 12 TAIPRHIAVIMDGNGRWAKKRFLPRIMGHKRGLDALENMVKHCAKLGVQYLTVFAFSTEN 71
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+S L+ L L+K L +NN++++++G+R + IL ++EAE T N
Sbjct: 72 WRRPEDEVSFLMGLFLQALQKQVRRLHENNMRLKILGSRERFNRQILQGIEEAEALTANN 131
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
TGL L IA +Y R +I +A + + S ++ +AK+L D P+PDL IR
Sbjct: 132 TGLTLSIAADYGGRWDILQAANKLIAEGVS------EITEDTLAKHLMLGDAPEPDLFIR 185
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE R+S+FLLWQ+AY+E F WPDF A+ + R+RRFG S++
Sbjct: 186 TGGETRISNFLLWQMAYAELYFTDILWPDFDETALDAAVASFQKRERRFGRTSEQ 240
>gi|152981211|ref|YP_001353744.1| undecaprenyl pyrophosphate synthetase [Janthinobacterium sp.
Marseille]
gi|151281288|gb|ABR89698.1| undecaprenyl pyrophosphate synthetase [Janthinobacterium sp.
Marseille]
Length = 254
Score = 197 bits (501), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 138/232 (59%), Gaps = 4/232 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R +PR AGH KG+E IV A A G++ +T FAFS NWRR
Sbjct: 17 PRHIAIIMDGNGRWATKRFMPRVAGHVKGVEAVRGIVEACARQGVEYVTFFAFSSENWRR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L + L++ + N I+++++G+ DD + ++ AE +T NT L
Sbjct: 77 PEDEVSLLMRLFVTALEREVSKMHANGIRLKIVGDLSRFDDKLQKMISAAERKTAGNTRL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ I NY R +I +A+ + + + S + +A YL + P+PDL IRTGG
Sbjct: 137 TVTICANYGGRWDIMQAVNQML----AANPGSSNFSEEQLAPYLSLAYAPEPDLFIRTGG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FLLWQ+AY+E F YWPDF A+ Y R+RRFG S +
Sbjct: 193 EERISNFLLWQLAYTELYFTDTYWPDFDAAALELAIASYQQRERRFGRTSAQ 244
>gi|319411328|emb|CBY91739.1| undecaprenyl pyrophosphate synthetase (UPP synthetase;
di-trans,poly-cis-decaprenylcistransferase; undecaprenyl
diphosphate synthase; UDS) [Neisseria meningitidis WUE
2594]
Length = 248
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/240 (41%), Positives = 146/240 (60%), Gaps = 6/240 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + ++ P HI +IMDGNGRWA R LPR GH++G++ +V A++G++ LT+FA
Sbjct: 7 AVLEHTAIPKHIAVIMDGNGRWAKKRFLPRIMGHKRGLDALENMVKHCAKLGVQYLTVFA 66
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP E+S L+ L L+K L +NN++++++G+R IL ++EAE
Sbjct: 67 FSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNMRLKILGSRERFSRQILKGIEEAEA 126
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTGL L IA +Y R +I +A + + S ++ +AK+L D P+P
Sbjct: 127 LTANNTGLTLSIAADYGGRWDILQAANKLIAEGVS------EITEDTLAKHLMLGDAPEP 180
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL IRTGGE R+S+FLLWQ+AY+E F WPDF + A+ + R+RRFG S++
Sbjct: 181 DLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDGKALDDAVASFQKRERRFGRTSEQ 240
>gi|283777899|ref|YP_003368654.1| undecaprenyl diphosphate synthase [Pirellula staleyi DSM 6068]
gi|283436352|gb|ADB14794.1| undecaprenyl diphosphate synthase [Pirellula staleyi DSM 6068]
Length = 251
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 86/230 (37%), Positives = 140/230 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA R LPR GHR+G+ V A +G+ L+++ S NW+R
Sbjct: 21 PRHVAVIMDGNGRWAQRRDLPRIEGHRRGVASVRRTVEEGARLGLTQLSLYCLSSENWKR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L++ ++ + ++ + NI V VIG R + + L + + + NTG+
Sbjct: 81 PQRELDFLMHLLEQYMIEERTTIMQQNITVSVIGRREGIPEATLAEMDRTVEMSAANTGM 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY +R E+ A++ I +++ G + +D +L++ L T+ +PDPDL+IRT G
Sbjct: 141 RLCLAINYGARGELVDAVRAIAAEVQQGKLDPATIDEALVSSKLYTAGMPDPDLLIRTAG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E R+S+FLLWQ++Y+E + WP+F + F ++ + RDRRFGGL+
Sbjct: 201 EMRISNFLLWQISYAELWVTEKCWPEFELDDFHQSIRSFAARDRRFGGLA 250
>gi|88812381|ref|ZP_01127631.1| undecaprenyl diphosphate synthase [Nitrococcus mobilis Nb-231]
gi|88790388|gb|EAR21505.1| undecaprenyl diphosphate synthase [Nitrococcus mobilis Nb-231]
Length = 256
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/237 (40%), Positives = 139/237 (58%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ + P H+ I+MDGNGRWA AR R GHR G ++V ++A GIK LT+F FS
Sbjct: 13 LEGAVPRHVAIVMDGNGRWAQARSQSRHLGHRAGARAVRQVVESSARAGIKALTLFVFSS 72
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NWRRP E+ L++L+ L+K L KN +++R+IG R + + AE+ T
Sbjct: 73 ENWRRPAGEVGMLMELLIRTLEKETPQLHKNRVRLRLIGERDQFSPRLQANIMAAENLTA 132
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
NTGL L +A +Y R +I+RA + + +++ +G +D + Y+ + +P PDL
Sbjct: 133 ANTGLQLNLAASYGGRWDIARAARRLAEEVANGERDPASIDEWVFGTYVCLAGLPAPDLF 192
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTGGE R+S+FLLWQ+AY+E F WPDF F AL + R RRFG S++
Sbjct: 193 IRTGGEHRISNFLLWQLAYTELYFTEVLWPDFDVSEFEAALRWFAQRQRRFGMTSEQ 249
>gi|218288328|ref|ZP_03492627.1| undecaprenyl diphosphate synthase [Alicyclobacillus acidocaldarius
LAA1]
gi|218241687|gb|EED08860.1| undecaprenyl diphosphate synthase [Alicyclobacillus acidocaldarius
LAA1]
Length = 254
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/230 (40%), Positives = 136/230 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+IMDGNGRWA RGLPR AGH G+ E + A + GI+ +T++AFS NW+R
Sbjct: 25 PRHIGLIMDGNGRWAQKRGLPRIAGHHAGMLAMKEAIRACDDFGIECVTLYAFSTENWKR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L++L + F + L + N++VR IG+ L ++ A T+ NTG+
Sbjct: 85 PAAEVDYLMRLPEQFFRSEIDELVRRNVRVRFIGDTERLPAHTQETVRRAIQCTQHNTGM 144
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ A NY R EI A++ +++ G + + +YLDT+ +P DL+IRT G
Sbjct: 145 MVNFALNYGGRMEIVAAMERYAREVMEGRATVGQLTEATCDRYLDTAGLPPLDLVIRTSG 204
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E RLS+FLLWQ AY+E F WPDF+R+ + A+ Y R RRFG +
Sbjct: 205 EIRLSNFLLWQAAYAELWFTDVLWPDFTRDDLYQAICDYAKRKRRFGAIE 254
>gi|88857973|ref|ZP_01132615.1| undecaprenyl pyrophosphate synthetase [Pseudoalteromonas tunicata
D2]
gi|88819590|gb|EAR29403.1| undecaprenyl pyrophosphate synthetase [Pseudoalteromonas tunicata
D2]
Length = 254
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/234 (42%), Positives = 141/234 (60%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ S P HI IIMDGNGRWA RG PR GH+KG++ V + + I +LT+FAF
Sbjct: 7 TVSQQSLPKHIAIIMDGNGRWAQQRGKPRVFGHKKGVDAVRRAVQFCSRLEISSLTLFAF 66
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRRP E+S L++L L K L KNN+K+++IG+ + + EA+
Sbjct: 67 SSENWRRPEDEVSTLMELFLLVLTKEVKKLHKNNVKLQIIGDLSRFSAKLQQRVVEAQAL 126
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N GL L IA NY R +I +A K + D+E G++ S D+ +++ + ++ D
Sbjct: 127 TKDNQGLCLNIAANYGGRWDIMQAAKKLAADVEQGNLQSSDITEDMLSANISMAEQAPLD 186
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
L+IRTGG+ R+S+FLLWQ AY+E F WPDF E F +A+ Y R+RRFG
Sbjct: 187 LLIRTGGDLRISNFLLWQAAYAELYFTETLWPDFDDEAFANAIACYVSRERRFG 240
>gi|309379114|emb|CBX22245.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 248
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/240 (41%), Positives = 145/240 (60%), Gaps = 6/240 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + ++ P HI +IMDGNGRWA R LPR GH++G++ +V A +G++ LT+FA
Sbjct: 7 AVLEHTAIPRHIAVIMDGNGRWAKKRFLPRIMGHKRGLDALENMVKHCAGLGVRYLTVFA 66
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP E+S L+ L L+K L +NN++++++G+R + IL ++EAE
Sbjct: 67 FSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNMRLKILGSRERFNRQILQGIEEAEA 126
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTGL L IA +Y R +I +A + + S ++ +AK+L D P+P
Sbjct: 127 LTANNTGLTLSIAADYGGRWDILQAANKLIAEGVS------EITEDTLAKHLMLGDAPEP 180
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL IRTGGE R+S+FLLWQ+AY+E F WPDF A+ + R+RRFG S++
Sbjct: 181 DLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDETALNAAVASFQKRERRFGRTSEQ 240
>gi|221194519|ref|ZP_03567576.1| di-trans,poly-cis-decaprenylcistransferase [Atopobium rimae ATCC
49626]
gi|221185423|gb|EEE17813.1| di-trans,poly-cis-decaprenylcistransferase [Atopobium rimae ATCC
49626]
Length = 260
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/228 (42%), Positives = 135/228 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA A+GL R GHR G+ E V A +G+ L+++AFS NWRR
Sbjct: 30 PAHVSLIMDGNGRWAKAQGLERTKGHRAGVTSLREAVTTAVRLGLDVLSVYAFSTENWRR 89
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E++ L++L L K + N+++R GN +L + +T+ NTG+
Sbjct: 90 SQKEVNFLMQLFAETLIKELPLFHQENVRLRFFGNLEALPKKTYMTFQRGLTETKDNTGM 149
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY +R E++RA + + + GS+ + I K L T+ +PDPDL+IRT G
Sbjct: 150 IFALAVNYGARAELTRAAALLAKQAQEGSIDPEAITPEDIEKNLYTAGLPDPDLLIRTSG 209
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
EKRLS++LLWQ+AYSE P WPDF+R F AL Y R+RRFGG
Sbjct: 210 EKRLSNYLLWQIAYSELYITPVLWPDFTRWDFLRALVAYQKRERRFGG 257
>gi|94968445|ref|YP_590493.1| undecaprenyl pyrophosphate synthetase [Candidatus Koribacter
versatilis Ellin345]
gi|94550495|gb|ABF40419.1| Undecaprenyl pyrophosphate synthetase [Candidatus Koribacter
versatilis Ellin345]
Length = 267
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/231 (43%), Positives = 140/231 (60%), Gaps = 2/231 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW-R 69
P HI IIMDGNGRWA R LPR AGHR G+ V A+ +GI +T++AFS+ NW R
Sbjct: 26 PRHIAIIMDGNGRWAKRRHLPRIAGHRSGVFAVRNTVQCASRIGIPAMTLYAFSVENWLR 85
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP +E+S L+ L++ +LK S +NN++V+ IG L ++ + A ++T NTG
Sbjct: 86 RPKTEVSFLMGLLRRYLKIEMSSFHENNVRVQFIGRWRELPVEVQERMDWAIEETANNTG 145
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSH-DVDSSLIAKYLDTSDVPDPDLIIRT 188
L L A NY R EI A+K++ +H D++ I +++ TS +P+ DL+IRT
Sbjct: 146 LTLTFAINYGGRSEIVDAVKSMINAARRNGGLNHLDINEESIDQHMYTSQLPELDLLIRT 205
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE RLS+FLLWQ AYSE WPDFS A+ ++ R+RRFGG+
Sbjct: 206 SGEMRLSNFLLWQAAYSEIYVTETLWPDFSGVKLLEAIAEFQKRERRFGGI 256
>gi|268593820|ref|ZP_06127987.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae 35/02]
gi|268597737|ref|ZP_06131904.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae FA19]
gi|268547209|gb|EEZ42627.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae 35/02]
gi|268551525|gb|EEZ46544.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae FA19]
Length = 257
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/235 (41%), Positives = 144/235 (61%), Gaps = 6/235 (2%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
++ P HI +IMDGNGRWA R LPR GH++G++ +V A++G++ LT+FAFS N
Sbjct: 21 TAIPRHIAVIMDGNGRWAKKRFLPRIMGHKRGLDALENMVKHCAKLGVQYLTVFAFSTEN 80
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+S L+ L L+K L +NN++++++G+R + IL ++EAE T N
Sbjct: 81 WRRPEDEVSFLMGLFLQALQKQVRRLHENNMRLKILGSRERFNRQILQGIEEAEALTANN 140
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
TGL L IA +Y R +I +A + + S ++ +AK+L D P+PDL IR
Sbjct: 141 TGLTLSIAADYGGRWDILQAANKLIAEGVS------EITEDTLAKHLMLGDAPEPDLFIR 194
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE R+S+FLLWQ+AY+E F WPDF A+ + R+RRFG S++
Sbjct: 195 TGGETRISNFLLWQMAYAELYFTDILWPDFDETALDAAVASFQKRERRFGRTSEQ 249
>gi|145300057|ref|YP_001142898.1| undecaprenyl pyrophosphate synthetase [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142852829|gb|ABO91150.1| undecaprenyl pyrophosphate synthetase [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 258
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/231 (41%), Positives = 144/231 (62%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+SS P H+ IIMDGNGRWA RG R GH+ G++ E V AA I+ LT+FAFS
Sbjct: 12 NSSLPRHVAIIMDGNGRWAQNRGKMRVYGHKAGVKSVREAVTFAARAKIEALTLFAFSSE 71
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+S L++L + L + L N I+++VIG+ + + + +AE T
Sbjct: 72 NWRRPEGEVSALMELFMTVLGREVKQLHSNGIRLKVIGDTARFSERLQARIAKAEALTAD 131
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N GL L IA NY + +I++A + + + + +G + + +D SL+A+ + +D+P DL+I
Sbjct: 132 NKGLTLNIAANYGGQWDIAQAARKLARAVAAGELDADAIDESLLAEQVCMADLPPVDLLI 191
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RTGG+ R+S+F+LWQ+AY+E F P WPDF+ F A+ + R+RRFG
Sbjct: 192 RTGGDHRISNFVLWQLAYAELYFTPVLWPDFNEAEFSEAVASFVARERRFG 242
>gi|119512924|ref|ZP_01631987.1| undecaprenyl pyrophosphate synthetase [Nodularia spumigena CCY9414]
gi|119462420|gb|EAW43394.1| undecaprenyl pyrophosphate synthetase [Nodularia spumigena CCY9414]
Length = 249
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 87/227 (38%), Positives = 135/227 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA +GLPR GH++G++ +++ + GI+ LT +AFS NW+R
Sbjct: 21 PKHVAVIMDGNGRWAKRQGLPRIMGHKRGVDALKDLLRCCKDWGIQALTAYAFSTENWKR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L + L++ + + N++++ +GN +L + + + +T N +
Sbjct: 81 PQEEVDFLMTLFQRVLRQELREMVEENVQIQFVGNLDALPRSLQAEISRSMAETSHNRAI 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY R EI +A + I Q ++ G + ++D L ++L T+ + DPDL+IRT G
Sbjct: 141 RFTVATNYGGRQEILQACRAIAQKVQQGVIQPDEIDEQLFERHLYTAGITDPDLLIRTSG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E RLS+FLLWQ+AY E WPDF R F AL Y R+RRFG
Sbjct: 201 EMRLSNFLLWQMAYGEIYITDALWPDFDRNEFHRALCAYQQRERRFG 247
>gi|260220939|emb|CBA29009.1| Undecaprenyl pyrophosphate synthetase [Curvibacter putative
symbiont of Hydra magnipapillata]
Length = 235
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 107/242 (44%), Positives = 144/242 (59%), Gaps = 9/242 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M AS+ S P H+ I+MDGNGRWA+ R LPR AGH++G++ IV A I LT+
Sbjct: 1 MSASV--SPSPLHVAIVMDGNGRWASKRFLPRLAGHKQGVDTLKRIVRACPPRNIATLTV 58
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW RP E+S L+ L+ L + LK+ +++R +G+R L + + L A
Sbjct: 59 FAFSSENWNRPADEVSGLMDLLAGALAREVSQLKQEGVRLRFVGSRSGLSEKVRQGLHLA 118
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E +T NTGL L + FNY R +I +A + + E G + D SS +A S
Sbjct: 119 ELETSSNTGLTLNVCFNYGGRWDIVQAARAL---AERGEDITEDSLSSAMA----LSPSA 171
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL IRTGGE R+S+FLLWQ AY+EF F P WPDFS AL ++N R+RRFG S
Sbjct: 172 DPDLFIRTGGEYRISNFLLWQSAYAEFFFSPVLWPDFSEIDLDTALTEFNSRERRFGKTS 231
Query: 241 KK 242
++
Sbjct: 232 EQ 233
>gi|294140007|ref|YP_003555985.1| undecaprenyl diphosphate synthase [Shewanella violacea DSS12]
gi|293326476|dbj|BAJ01207.1| undecaprenyl diphosphate synthase [Shewanella violacea DSS12]
Length = 264
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 93/236 (39%), Positives = 144/236 (61%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ ++ S P H+ IIMDGNGRWA A+G PR GH+ G++ V+ A E+GI++LT+F
Sbjct: 16 ITELVKQSKPKHVAIIMDGNGRWAQAQGKPRIMGHKAGVKAVRRAVSTAREIGIESLTLF 75
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP E+S L+ L + L++ L KN +++ +IG+ + + + AE
Sbjct: 76 AFSSENWRRPDKEVSFLMGLFFTVLQREIKLLHKNGVRLNIIGDISRFSERLQKQISAAE 135
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T NTGL L +A NY R +I +A + + + +E+G + S ++++L + +
Sbjct: 136 EKTAGNTGLVLNVAANYGGRWDIMQAAQALAKKVETGEMNSSQFTEEALSQHLCMQNQAE 195
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRTGG+ R+S+F+LWQ AY+E VF WPDF F A+ + R RRFG
Sbjct: 196 VDLMIRTGGDYRISNFILWQAAYAELVFTDTLWPDFDENAFKQAVAIFASRQRRFG 251
>gi|212704265|ref|ZP_03312393.1| hypothetical protein DESPIG_02320 [Desulfovibrio piger ATCC 29098]
gi|212672345|gb|EEB32828.1| hypothetical protein DESPIG_02320 [Desulfovibrio piger ATCC 29098]
Length = 240
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 136/232 (58%), Gaps = 4/232 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA ARGLPR AGHR G E IV +GI++LT++ FS NW R
Sbjct: 9 PVHLAIIMDGNGRWAQARGLPREAGHRAGAETVRTIVTECRRLGIRHLTLYTFSSENWSR 68
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+S L L+ FL + ++ I++ ++G+ +L L+ +T NT +
Sbjct: 69 PKTEVSALFSLLLEFLGQEVPRMESEGIRLNILGDMEALPLAARTALRHGLRRTAANTDM 128
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY R E+ RA++++ + + DV +A +L T+ PDPD +IRT G
Sbjct: 129 VLNLALNYGGRAELVRAVRSMMAE----GLRPEDVTEQSLADHLYTAGQPDPDFLIRTSG 184
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+RLS++LL+Q AYSEF F P WPDF E AL Y R RRFG ++
Sbjct: 185 EQRLSNYLLYQCAYSEFYFTPTPWPDFGVEALHEALAVYAGRSRRFGKTQEQ 236
>gi|258511404|ref|YP_003184838.1| undecaprenyl diphosphate synthase [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478130|gb|ACV58449.1| undecaprenyl diphosphate synthase [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 254
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/230 (40%), Positives = 136/230 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+IMDGNGRWA RGLPR AGH G+ E + A + GI+ +T++AFS NW+R
Sbjct: 25 PRHIGLIMDGNGRWAQQRGLPRIAGHHAGMLAMKEAIRACDDFGIECVTLYAFSTENWKR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L++L + F + L + N++VR IG+ L ++ A T+ NTG+
Sbjct: 85 PAAEVDYLMRLPEQFFRSEIDELVRRNVRVRFIGDTERLPTHTQETVRRAIQCTQHNTGM 144
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ A NY R EI A++ +++ G + + +YLDT+ +P DL+IRT G
Sbjct: 145 IVNFALNYGGRMEIVAAMERYAREVMEGRATVGQLTEATCDRYLDTAGLPPLDLVIRTSG 204
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E RLS+FLLWQ AY+E F WPDF+R+ + A+ Y R RRFG +
Sbjct: 205 EIRLSNFLLWQAAYAELWFTDVLWPDFTRDDLYQAICDYAKRKRRFGAIE 254
>gi|121998244|ref|YP_001003031.1| undecaprenyl diphosphate synthase [Halorhodospira halophila SL1]
gi|121589649|gb|ABM62229.1| Undecaprenyl pyrophosphate synthetase [Halorhodospira halophila
SL1]
Length = 259
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/230 (42%), Positives = 134/230 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI I+MDGNGRWA +G PR AGHR G E+V A + ++ LT+FAFS NWRR
Sbjct: 20 PRHIAIVMDGNGRWAQRQGQPRYAGHRAGARSVREVVEACGRLELEALTLFAFSSENWRR 79
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L ++ L + L +N++++ IG+R + + L +AE T NTGL
Sbjct: 80 PRGEVRVLMQLFRTTLDQELQRLHENDVRLSFIGDRTQFEAGLQRRLTDAEALTAENTGL 139
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y R EI+ A + + G V +D L DV DPDL IRTGG
Sbjct: 140 QLIVATSYGGRWEIAEAARRLAASAARGEVDPQSIDEDAFRGALSLPDVVDPDLFIRTGG 199
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E+R+S+FLLWQ+AY+E F WPDF E A+ Y RDRRFG ++
Sbjct: 200 ERRISNFLLWQMAYTELHFAETLWPDFGTEGLARAIEDYAARDRRFGAVT 249
>gi|296274438|ref|YP_003657069.1| undecaprenyl diphosphate synthase [Arcobacter nitrofigilis DSM
7299]
gi|296098612|gb|ADG94562.1| undecaprenyl diphosphate synthase [Arcobacter nitrofigilis DSM
7299]
Length = 226
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/232 (41%), Positives = 140/232 (60%), Gaps = 7/232 (3%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
SS P H+ IIMDGNGRWA +GL R AGH +G + EI A +GIK LT++AFS N
Sbjct: 2 SSLPQHVAIIMDGNGRWAKEQGLNRTAGHEEGAKTVREITTHANNLGIKYLTLYAFSTEN 61
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP E+ L+KL++ +LK +N +K + IG+ + + V+ + +++T+
Sbjct: 62 WSRPKLEVEFLMKLLERYLKNELPIYLENGVKFKAIGDLSKFSNSLQKVISDTQEKTKNA 121
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
GL +A NY SRDEI+RA+K + +V+ I LDT+ +PD D++IR
Sbjct: 122 KGLTQILALNYGSRDEITRAVKKLVDK-------KLEVNQENIESCLDTAGIPDVDMLIR 174
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
T GE R+S++LLWQ AY+E F YWP+FS+ F L+ + R+RRFG +
Sbjct: 175 TSGEIRISNYLLWQCAYAEMFFTKTYWPEFSKNEFDDLLSDFKNRERRFGSV 226
>gi|294782681|ref|ZP_06748007.1| di-trans,poly-cis-decaprenylcistransferase [Fusobacterium sp.
1_1_41FAA]
gi|294481322|gb|EFG29097.1| di-trans,poly-cis-decaprenylcistransferase [Fusobacterium sp.
1_1_41FAA]
Length = 230
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/234 (42%), Positives = 142/234 (60%), Gaps = 7/234 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M + P HI IIMDGNGRWA RGL R GH +G + + E+G+K LT++AFS
Sbjct: 1 MEKNIPQHIAIIMDGNGRWAKKRGLARSFGHMEGAKSLRRALEYFTEIGVKYLTVYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+S L+KL ++K ++ KN I+ V G + ++ + +L +++ +++T+
Sbjct: 61 ENWSRPKDEVSTLMKLFLKYIKSERKNMMKNKIRFFVSGRKNNIPEKLLNEIEKLKEETK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N + L IAFNY SR EI A+ +I +D +++ +KYL +D PDPDL+
Sbjct: 121 NNDKITLNIAFNYGSRAEIIDAVNDIIKD------GKENINEEDFSKYL-YNDFPDPDLL 173
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRT GE R+S+FLLWQ+AYSE WPDF + A+ YN RDRRFGG+
Sbjct: 174 IRTSGEMRISNFLLWQIAYSELYITDTLWPDFDEKEIDKAIESYNQRDRRFGGV 227
>gi|313124037|ref|YP_004034296.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
gi|312280600|gb|ADQ61319.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
gi|325685952|gb|EGD28015.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus
delbrueckii subsp. lactis DSM 20072]
Length = 243
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/233 (42%), Positives = 141/233 (60%), Gaps = 3/233 (1%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+H+ IIMDGNGRWA R +PR GH+ G++ +I AA E+GIK LT++AFS NW RP
Sbjct: 8 NHLAIIMDGNGRWAKKRKMPRFMGHKAGMDNVEKIALAADELGIKVLTLYAFSTENWARP 67
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E++ L+ L F K L+ +N+KV ++G +L + V++ A +T NTGL
Sbjct: 68 KDEVNYLMNLPVKFFDKFMPRLQAHNVKVNIMGYLDALPESTREVVERAMAETAANTGLV 127
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP---DPDLIIRT 188
L AFNY SR EI A++ + ++ SG + ++ +++ L T+ DPDL+IRT
Sbjct: 128 LNFAFNYGSRKEIVSAVQALAKEAASGEITPEEITEDMVSAKLMTAKFAPYSDPDLLIRT 187
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
GE+R+S+FLLWQ+AYSE F + WPDF + Y RDRRFG L +
Sbjct: 188 SGEQRISNFLLWQIAYSELAFTDKAWPDFDENDLAEMVKIYQHRDRRFGKLDE 240
>gi|300812601|ref|ZP_07093018.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus
delbrueckii subsp. bulgaricus PB2003/044-T3-4]
gi|300496474|gb|EFK31579.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus
delbrueckii subsp. bulgaricus PB2003/044-T3-4]
Length = 243
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/233 (42%), Positives = 141/233 (60%), Gaps = 3/233 (1%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+H+ IIMDGNGRWA R +PR GH+ G++ +I AA E+GIK LT++AFS NW RP
Sbjct: 8 NHLAIIMDGNGRWAKKRKMPRFMGHKAGMDNVEKIALAADELGIKVLTLYAFSTENWARP 67
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E++ L+ L F K L+ +N+KV ++G +L + V++ A +T NTGL
Sbjct: 68 KDEVNYLMNLPVKFFDKFMPRLQAHNVKVNIMGYLDALPESTREVVERAMAETAANTGLV 127
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP---DPDLIIRT 188
L AFNY SR EI A++ + ++ SG + ++ +++ L T+ DPDL+IRT
Sbjct: 128 LNFAFNYGSRKEIVSAVQALAKEAASGEITPEEITEDMVSAKLMTAKFAPYSDPDLLIRT 187
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
GE+R+S+FLLWQ+AYSE F + WPDF + Y RDRRFG L +
Sbjct: 188 SGEQRISNFLLWQIAYSELAFTDKAWPDFDENDLAEMVKIYQHRDRRFGKLDE 240
>gi|220910055|ref|YP_002485366.1| undecaprenyl pyrophosphate synthase [Cyanothece sp. PCC 7425]
gi|219866666|gb|ACL47005.1| undecaprenyl diphosphate synthase [Cyanothece sp. PCC 7425]
Length = 249
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 91/229 (39%), Positives = 138/229 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA +GLPR GHR+G++ E++ + GI+ LT +AFS NW R
Sbjct: 21 PRHVAVIMDGNGRWAKRQGLPRILGHRRGVDALKELLRCCKDWGIEALTAYAFSTENWGR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P++E+ L+ L + L++ L + +++ +G+ SL + ++ A T+ N +
Sbjct: 81 PLAEVEFLMTLFERVLRRELEELIQEGVQIHFVGDLDSLPASLQEEIERAVTATQANQTI 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY R EI +A + I Q+++ G + D+D L ++L T+ + DPDL+IRT G
Sbjct: 141 RFVVATNYGGRREILQACRAIAQEVKQGQLQVEDIDEGLFERHLYTAGMGDPDLLIRTSG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+FLLWQ+AYSE WPDF R F AL+ + R RRFG L
Sbjct: 201 EMRISNFLLWQLAYSELYVTETLWPDFDRAEFHRALSDFQHRHRRFGRL 249
>gi|296130028|ref|YP_003637278.1| undecaprenyl diphosphate synthase [Cellulomonas flavigena DSM
20109]
gi|296021843|gb|ADG75079.1| undecaprenyl diphosphate synthase [Cellulomonas flavigena DSM
20109]
Length = 261
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 93/228 (40%), Positives = 138/228 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ ++MDGNGRWA ARGLPR GHR G ++VA A EVG+++++ +AFS NW+R
Sbjct: 26 PKHVAVVMDGNGRWANARGLPRVEGHRAGESSLLDVVAGAIEVGVQHVSAYAFSTENWKR 85
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + L++ + ++VR G R L ++ L+EAE TR NT
Sbjct: 86 SPDEVRFLMGFNRDVLRRRRDLMHSWGVRVRWAGRRPRLWRSVVAELEEAERLTRHNTTC 145
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R EI+ A K I +++ +G + V + ++LD D+PD DL +R+ G
Sbjct: 146 TLTMCVNYGGRAEIADAAKQIAREVAAGRLDPEKVTERTVQRHLDEPDLPDVDLFVRSSG 205
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R+S+F+LWQ AY+E VF+ E WPD R + A+ Y RDRR+GG
Sbjct: 206 EQRISNFMLWQSAYAEMVFLDEPWPDVDRRHLWRAVETYARRDRRYGG 253
>gi|126173692|ref|YP_001049841.1| undecaprenyl diphosphate synthase [Shewanella baltica OS155]
gi|125996897|gb|ABN60972.1| Undecaprenyl pyrophosphate synthetase [Shewanella baltica OS155]
Length = 275
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 144/233 (61%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
++ S P H+ IIMDGNGRWA +G PR GH+ G++ V+ A+++GI++LT+FAFS
Sbjct: 31 LVKQSLPKHVAIIMDGNGRWAQTQGKPRVLGHKAGVKAVRRAVSTASQLGIESLTLFAFS 90
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRRP E+S L++L + L++ L KN +K+++IG+ + + A+D+T
Sbjct: 91 SENWRRPDKEVSLLMELFFTVLQREIKLLHKNQVKLKIIGDISRFSARLQKQIAAAQDKT 150
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NTGL L +A NY R +I +A + + + +E+G + S ++ +L + + DL
Sbjct: 151 SGNTGLVLNVAANYGGRWDILQAAQKLAEKVETGEMTSSQFTEEALSAHLCMQNQSEVDL 210
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+IRTGG+ R+S+F+LWQ AY+E VF WPDF + F A+ + R RRFG
Sbjct: 211 MIRTGGDCRISNFVLWQAAYAELVFTDTLWPDFDEQAFHEAIAIFASRQRRFG 263
>gi|270159154|ref|ZP_06187810.1| di-trans,poly-cis-decaprenylcistransferase [Legionella longbeachae
D-4968]
gi|289166015|ref|YP_003456153.1| Undecaprenyl pyrophosphate synthetase [Legionella longbeachae
NSW150]
gi|269987493|gb|EEZ93748.1| di-trans,poly-cis-decaprenylcistransferase [Legionella longbeachae
D-4968]
gi|288859188|emb|CBJ13120.1| Undecaprenyl pyrophosphate synthetase [Legionella longbeachae
NSW150]
Length = 252
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/230 (42%), Positives = 135/230 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI I+MDGNGRWA +RGL R GH+ G+E +++ + G+ L++FAFS NW R
Sbjct: 23 PQHIAIVMDGNGRWAESRGLARIEGHKAGVESVKKMIRSCMTKGVPYLSLFAFSSENWLR 82
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
PV E+S L++L L+K L ++ I++R GNR SL + + EAE T N
Sbjct: 83 PVEEVSFLMELFLESLRKEIAELNQHGIRMRFTGNRSSLSPVLQKQMHEAEALTAKNEQF 142
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L I NY + +++ A K I Q + G + +++ A YLDT +PDPDL IRT G
Sbjct: 143 TLNIVVNYGGKWDVANAAKKIAQAVLRGELTLDEINEVSFAHYLDTEGLPDPDLFIRTSG 202
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E R+S+F LWQ+AY+E F WPDF F AL +N R RRFG +S
Sbjct: 203 ELRISNFFLWQLAYTELYFSEVNWPDFGENEFELALASFNKRKRRFGQIS 252
>gi|227540580|ref|ZP_03970629.1| Di-trans,poly-cis-decaprenylcistransferase [Sphingobacterium
spiritivorum ATCC 33300]
gi|227239662|gb|EEI89677.1| Di-trans,poly-cis-decaprenylcistransferase [Sphingobacterium
spiritivorum ATCC 33300]
Length = 245
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/232 (40%), Positives = 142/232 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA G R GH+ G+ E + A E+GI LT++AFS NW R
Sbjct: 13 PQHVAIIMDGNGRWAKGLGKLRIFGHQNGVSAVREAMEGAVELGIPYLTLYAFSTENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L+ + L K + + N I++ IG+ L + L E+ + T NT
Sbjct: 73 PKLEVLALMELLVTTLSKEIKTFQDNGIRLNTIGDIDKLPKNCRAKLMESMELTAHNTTC 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +YSS+ EI A K I + + G++ +D + A +L T ++PDPDL+IRT G
Sbjct: 133 VLTLALSYSSQKEIVDATKEICKQVIQGNLDIDAIDEKVFANHLYTRNMPDPDLLIRTSG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S++LLWQ+AYSE F+P+ WP+F+R+ + + Y R+RRFG S++
Sbjct: 193 EQRISNYLLWQIAYSELSFLPKMWPEFTRDDLYECVYNYQQRERRFGKTSEQ 244
>gi|256845598|ref|ZP_05551056.1| di-trans,poly-cis-decaprenylcistransferase [Fusobacterium sp.
3_1_36A2]
gi|256719157|gb|EEU32712.1| di-trans,poly-cis-decaprenylcistransferase [Fusobacterium sp.
3_1_36A2]
Length = 230
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/234 (41%), Positives = 141/234 (60%), Gaps = 7/234 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M + P+HI IIMDGNGRWA RGL R GH +G + + + E+G+K LT++AFS
Sbjct: 1 MKKNIPNHIAIIMDGNGRWAKKRGLARSFGHMEGAKTLRKALEYLTEIGVKYLTVYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+S L+KL ++K ++ KN I+ V G + ++ + + +++ E++T+
Sbjct: 61 ENWNRPQDEVSTLMKLFLKYIKSERKNMMKNKIRFFVSGRKNNVPEKLQKEIEKLEEETK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N + L IAFNY SR EI A+ I +D ++ +KYL +D PDPDL+
Sbjct: 121 NNDKITLNIAFNYGSRAEIVDAVNRIIKD------GKENITEEDFSKYL-YNDFPDPDLV 173
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRT GE R+S+FLLWQ+AYSE WPDF + A+ YN R+RRFGG+
Sbjct: 174 IRTSGEMRISNFLLWQIAYSELYITDTLWPDFDEKEIDKAIESYNQRERRFGGV 227
>gi|322420122|ref|YP_004199345.1| undecaprenyl diphosphate synthase [Geobacter sp. M18]
gi|320126509|gb|ADW14069.1| undecaprenyl diphosphate synthase [Geobacter sp. M18]
Length = 248
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/232 (40%), Positives = 139/232 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA R L R GH+KG+E IV + +GI LT+FAFS NW R
Sbjct: 11 PRHLAVIMDGNGRWAKQRMLRRIVGHQKGVETVRVIVEECSRLGIGYLTLFAFSAENWLR 70
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L+ L+K +++ + +N+I+ VIG R L +D+ ++ A ++T N G+
Sbjct: 71 PKTEVKALMALLKQYIRGETTRMMQNDIRFNVIGKRADLPEDVNREIQSAIEKTAGNRGM 130
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y SR EI A + + + +G + +D + L T+ +PDPDL+IRT G
Sbjct: 131 LLTLALSYGSRQEIVAAAQKLATEAAAGRIDPESIDENAFTGSLFTAGIPDPDLLIRTSG 190
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AY+E F WPDF + A Y R+RRFG S++
Sbjct: 191 EMRISNFLLWQLAYAELYFTEVNWPDFDKHELARAFCDYQSRERRFGKTSEQ 242
>gi|87310539|ref|ZP_01092668.1| undecaprenyl pyrophosphate synthetase [Blastopirellula marina DSM
3645]
gi|87286760|gb|EAQ78665.1| undecaprenyl pyrophosphate synthetase [Blastopirellula marina DSM
3645]
Length = 259
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 136/229 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA +GLPR GHR+G+ A +GI+ LT++ S NW+R
Sbjct: 22 PRHIAVIMDGNGRWAQRQGLPRVEGHRRGVTSVRRTTEECARLGIQQLTLYCLSSENWKR 81
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L++ ++ + ++ NNI+VR+IG R + + + + + + NTG
Sbjct: 82 PQYELDFLMHLLEQYMIEERSTIMANNIQVRIIGRRDGIPEQVQHEMDRTIELSAANTGT 141
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY R E+ A++ + +G++ + IA +L T+ +PDPDL+IRT G
Sbjct: 142 TLCLAINYGGRGEMVDAVRKMATAAAAGTLEPAKITEDAIAAHLYTAGMPDPDLLIRTAG 201
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+FLLWQ++Y+E + WP+F E A+ + RDRRFGGL
Sbjct: 202 EMRISNFLLWQISYAELWVTQQCWPEFCEETLHQAIRDFAGRDRRFGGL 250
>gi|322379054|ref|ZP_08053457.1| putative undecaprenyl pyrophosphate synthase [Helicobacter suis
HS1]
gi|321148546|gb|EFX43043.1| putative undecaprenyl pyrophosphate synthase [Helicobacter suis
HS1]
Length = 228
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/227 (42%), Positives = 137/227 (60%), Gaps = 6/227 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA +G PR GHRKG+ V I A+ I+ LT++AFS NW R
Sbjct: 6 PEHLAIIMDGNGRWAKQQGKPRTYGHRKGVGVLRNITVWCAQNQIRYLTLYAFSTENWSR 65
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L+ ++K +LK+ + +NNI+ +VIG+ + + E +T N L
Sbjct: 66 PQTEVDFLMGILKKYLKEERATYLENNIRFKVIGDLKKFSPSLQKTILNLEQETTHNNAL 125
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY SRDEI+RA N+ + G + LIA++LDT+ +PD DL++RTGG
Sbjct: 126 TQVLALNYGSRDEIARACINLIKKGAKGDM------QHLIAQHLDTAGLPDVDLLVRTGG 179
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E RLS+FLLWQ +Y+E F P WPDF+ + +N R R+FG
Sbjct: 180 EMRLSNFLLWQSSYAELFFSPVLWPDFTPAHLQEIIALFNQRQRKFG 226
>gi|57234844|ref|YP_181119.1| undecaprenyl diphosphate synthase [Dehalococcoides ethenogenes 195]
gi|57225292|gb|AAW40349.1| undecaprenyl diphosphate synthase [Dehalococcoides ethenogenes 195]
Length = 236
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/234 (41%), Positives = 146/234 (62%), Gaps = 4/234 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
++++PP+HI IIMDGNGRWA RGL R GH+ G+E +I+ +G+K +T+++FS
Sbjct: 7 INNTPPNHIAIIMDGNGRWAERRGLSRLDGHKAGLENARQIIRHLNSLGVKYVTLYSFST 66
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP +EI L LI + L +NN++++ +G+ L + L + +T
Sbjct: 67 ENWKRPDTEIKGLFGLINDIMSSYIPELVENNVRLKHLGHLDKLPSVLKDKLADLLSRTS 126
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
NTGL L +AF+Y RDEI +A+K + +D + + + ++ YL T+ +P+ DL+
Sbjct: 127 RNTGLTLCLAFDYGGRDEIIQAVKKLVKD----GLAADKITENVFDGYLYTAGIPEADLV 182
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRTGGE RLS+FLLWQ AYSE F WPDF + +A++ +N R RRFGGL
Sbjct: 183 IRTGGEMRLSNFLLWQSAYSELYFSEVMWPDFGEKEIDNAISAFNQRQRRFGGL 236
>gi|220912715|ref|YP_002488024.1| undecaprenyl diphosphate synthase [Arthrobacter chlorophenolicus
A6]
gi|219859593|gb|ACL39935.1| undecaprenyl diphosphate synthase [Arthrobacter chlorophenolicus
A6]
Length = 275
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/228 (41%), Positives = 137/228 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I+MDGNGRWA RGLPR GH+ G +++A A ++GI+ ++++AFS NWRR
Sbjct: 38 PRHVAIVMDGNGRWANQRGLPRIEGHKAGEPALLDVMAGAIQLGIEYVSVYAFSTENWRR 97
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ K L++ L + ++VR G R L ++ L+EAE T N+
Sbjct: 98 SPEEVRFLMGFNKDVLRRQRNQLDEWGVRVRWSGRRPKLWGSVIRELEEAEAYTAGNSTC 157
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R EI+ A+ I ++ +G + + I KYLD D+PD DL +R+ G
Sbjct: 158 TLTMCVNYGGRAEITDAVSAIAAEVAAGRLKPGAITERTIQKYLDEPDLPDVDLFLRSSG 217
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+RLS+FLLWQ AY+EFVF+ WPD R + A+ +Y RDRR+GG
Sbjct: 218 EQRLSNFLLWQSAYAEFVFMDTLWPDVDRRTLWAAVEEYAQRDRRYGG 265
>gi|330807785|ref|YP_004352247.1| Di-trans,poly-cis-decaprenylcistransferase (undecaprenyl
pyrophosphate synthetase) [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327375893|gb|AEA67243.1| Di-trans,poly-cis-decaprenylcistransferase (undecaprenyl
pyrophosphate synthetase) [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 251
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 139/232 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGN RWA R +P AGH+ G++ ++ AE G++ LT+FAFS NW+R
Sbjct: 13 PRHVAIIMDGNNRWAKKRFMPGVAGHKAGVDAVRAVIEVCAEAGVEVLTLFAFSSENWQR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L L++ L +N I +R+IG+R ++ ++EAE T
Sbjct: 73 PADEVSALMDLFLKALRREAKRLNENKISLRIIGDRSRFHPELQAAMREAESATAGPDRF 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY + +I++A + + +++++G + D+ L+ L T D+P PDL IRTGG
Sbjct: 133 VLQIAANYGGQWDIAQAAQRLAREVQAGHLRPEDITPELLQTCLATGDLPLPDLCIRTGG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AY+E F +WPDF E AL + R RRFG S++
Sbjct: 193 EHRISNFLLWQLAYAELYFSDLFWPDFKHEAMRTALADFASRQRRFGKTSEQ 244
>gi|237734610|ref|ZP_04565091.1| undecaprenyl pyrophosphate synthetase [Mollicutes bacterium D7]
gi|229382430|gb|EEO32521.1| undecaprenyl pyrophosphate synthetase [Coprobacillus sp. D7]
Length = 251
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/230 (40%), Positives = 139/230 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IMDGNGRWA R +PR GH +G + ++ ++G+K +T++AFS N+ R
Sbjct: 22 PQHIAFIMDGNGRWAKKRKMPRTYGHHEGTKTIRDVALHCNKLGVKAMTVYAFSTENFAR 81
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ + KL K F + L +NN+K+ IG+ + ++ A D+T+ NTGL
Sbjct: 82 PEQEVQYIFKLPKDFFELYMKELIENNVKICTIGHLEMAPKETQDIINSAIDKTKNNTGL 141
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L AF Y RDEI A K + +++G + ++++ ++ L T D+P+ DL+IRT G
Sbjct: 142 KLCFAFIYGGRDEILEATKKLAMKVKAGELGVNEINETVFNDELMTKDLPEVDLMIRTSG 201
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E+RLS+FLLWQ+AY+EF+F WPDF+ A+ Y RDRRFGGL
Sbjct: 202 EQRLSNFLLWQLAYAEFIFTDVLWPDFNENELDKAIWMYQNRDRRFGGLK 251
>gi|330936820|gb|EGH40973.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 251
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/241 (38%), Positives = 145/241 (60%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + SS P H+ IIMDGN RWA R LP AGH+ G++ ++ AE ++ LT+F
Sbjct: 4 IKPAVPSSVPRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAEARVEVLTLF 63
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E+ L++L + L++ L +N I +R+IG+R ++ ++EAE
Sbjct: 64 AFSSENWQRPAEEVGALMELFFTALRRETKRLNENEISLRIIGDRSRFHPELQAAMREAE 123
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T + L IA NY + +I++A + + +++++G + D+ L+ L T D+P
Sbjct: 124 VRTSGTSRFVLQIAANYGGQWDIAQAAQRLAREVQAGHLQPEDITPQLLQTCLATGDLPL 183
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL IRTGGE R+S+FLLWQ+AY+E F +WPDF + AL + R RRFG S+
Sbjct: 184 PDLCIRTGGEHRISNFLLWQLAYAELYFSDLFWPDFKHDAMRAALADFASRQRRFGKTSE 243
Query: 242 K 242
+
Sbjct: 244 Q 244
>gi|311105987|ref|YP_003978840.1| di-trans,poly-cis-decaprenylcistransferase [Achromobacter
xylosoxidans A8]
gi|310760676|gb|ADP16125.1| di-trans,poly-cis-decaprenylcistransferase [Achromobacter
xylosoxidans A8]
Length = 254
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 140/232 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA R LPR AGH KG++ +V A G++ LT+FAFS NWRR
Sbjct: 16 PEHVAIIMDGNGRWATRRLLPRTAGHAKGVQAVRRVVEACGRAGVRYLTLFAFSSENWRR 75
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L L++ L + +++ VIG+ + + + ++ A+++T N L
Sbjct: 76 PAEEVSLLMRLFVQALEREIGKLDEQGVRLHVIGDLSAFEPRLQELIFAAQERTAHNDRL 135
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L +A NY R +I +A + + + VD ++++L + P+PDL IRTGG
Sbjct: 136 HLTVAANYGGRWDILQATRAMLAAEPGLASQPQLVDEERLSRHLSMAWAPEPDLFIRTGG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FL+WQ+AY+EF F YWPDF A + Y R+RRFG S +
Sbjct: 196 EQRISNFLIWQMAYAEFYFTDRYWPDFGAAELAAAFDWYRTRERRFGRTSAQ 247
>gi|304388990|ref|ZP_07371037.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
ATCC 13091]
gi|254672754|emb|CBA06773.1| undecaprenyl pyrophosphate synthetase [Neisseria meningitidis
alpha275]
gi|304337124|gb|EFM03311.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
ATCC 13091]
gi|325135113|gb|EGC57740.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis M13399]
Length = 248
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/240 (41%), Positives = 145/240 (60%), Gaps = 6/240 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + ++ P HI +IMDGNGRWA R LPR GH++G++ +V A++G++ LT+FA
Sbjct: 7 AVLEHTAIPKHIAVIMDGNGRWAKKRFLPRIMGHKRGLDALENMVKHCAKLGVQYLTVFA 66
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP E+S L+ L L+K L +NN++++++G+R IL ++EAE
Sbjct: 67 FSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNMRLKILGSRERFSRQILKGIEEAEA 126
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTGL L IA +Y R +I +A + S ++ +AK+L D P+P
Sbjct: 127 LTANNTGLTLSIAADYGGRWDILQAANKLIAKGVS------EITEDTLAKHLMLGDAPEP 180
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL IRTGGE R+S+FLLWQ+AY+E F WPDF + A+ + R+RRFG S++
Sbjct: 181 DLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDGKALDDAVASFQKRERRFGRTSEQ 240
>gi|312131844|ref|YP_003999184.1| undecaprenyl diphosphate synthase [Leadbetterella byssophila DSM
17132]
gi|311908390|gb|ADQ18831.1| undecaprenyl diphosphate synthase [Leadbetterella byssophila DSM
17132]
Length = 240
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 92/227 (40%), Positives = 141/227 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA +RG R GH+ GI+ E V AE+GIK LT++ FS NW R
Sbjct: 10 PKHVAVIMDGNGRWAKSRGALRIFGHQHGIKAVRETVEGCAELGIKYLTLYTFSTENWGR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ ++ L+ + L KNN++++ IG+ +L D +++ + T NTGL
Sbjct: 70 PKAEVDGIMDLLVKTIGDEVPRLHKNNVRLQCIGDMDALPDSARKNMEKGIETTAGNTGL 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA +YS + +I + K + +++ G + + D+D +L ++YL T PD DL+IRTGG
Sbjct: 130 VLNIALSYSGKWDILQVSKKLATEVKEGKIQASDIDETLFSQYLSTFPAPDVDLLIRTGG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+ R+S++LLWQ AY+E +F+ WPDF + A+ + RDRRFG
Sbjct: 190 DHRISNYLLWQSAYAELLFLDILWPDFRKSHLLDAIKSFQTRDRRFG 236
>gi|297199545|ref|ZP_06916942.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sviceus
ATCC 29083]
gi|197713529|gb|EDY57563.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sviceus
ATCC 29083]
Length = 282
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/228 (40%), Positives = 139/228 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ I+MDGNGRWA RGLPR GH+ G E +++ A E G+KN++++AFS NW+R
Sbjct: 35 PEHVAIVMDGNGRWAKERGLPRTEGHKVGAERVLDVLQGAIEAGVKNISLYAFSTENWKR 94
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + F++K L + I+VR +G L + L+ A++QT+ N L
Sbjct: 95 SPDEVRFLMNFNRDFIRKTRDQLDELGIRVRWVGRMPKLWKSVAKELQVAQEQTKGNDKL 154
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L+ NY R EI+ A + + +D+++G + V+ +AKYL D+PD DL +R G
Sbjct: 155 TLYFCMNYGGRAEIADAAQALAEDVKAGRLDPAKVNEKTLAKYLYYPDMPDVDLFLRPSG 214
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S++LLWQ AY+E VF WPDF R + A ++ RDRRFGG
Sbjct: 215 EQRTSNYLLWQSAYAEMVFQDVLWPDFDRRDLWRACVEFASRDRRFGG 262
>gi|294785113|ref|ZP_06750401.1| di-trans,poly-cis-decaprenylcistransferase [Fusobacterium sp.
3_1_27]
gi|294486827|gb|EFG34189.1| di-trans,poly-cis-decaprenylcistransferase [Fusobacterium sp.
3_1_27]
Length = 230
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/234 (41%), Positives = 140/234 (59%), Gaps = 7/234 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M + P+HI IIMDGNGRWA RGL R GH +G + + + E+G+K LT++AFS
Sbjct: 1 MKKNVPNHIAIIMDGNGRWAKKRGLARSFGHMEGAKTLRKALEYLTEIGVKYLTVYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+S L+KL ++K ++ KN I+ V G + ++ + + +++ E++T+
Sbjct: 61 ENWNRPQDEVSTLMKLFLKYIKSERKNMMKNKIRFFVSGRKNNVPEKLQKEIEKLEEETK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N + L IAFNY SR EI A+ I D ++ +KYL +D PDPDL+
Sbjct: 121 NNDKITLNIAFNYGSRAEIVDAVNRIIDD------GKENITEEDFSKYL-YNDFPDPDLV 173
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRT GE R+S+FLLWQ+AYSE WPDF + A+ YN R+RRFGG+
Sbjct: 174 IRTSGEMRISNFLLWQIAYSELYITDTLWPDFDEKEIDKAIESYNQRERRFGGV 227
>gi|307564740|ref|ZP_07627268.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella amnii CRIS
21A-A]
gi|307346462|gb|EFN91771.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella amnii CRIS
21A-A]
Length = 252
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/233 (40%), Positives = 143/233 (61%), Gaps = 8/233 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R PR GH+ G+E I ++G+K LT++ FS NW R
Sbjct: 11 PEHIAIIMDGNGRWAQRRNQPRTEGHKAGVETVRRITNICGKIGVKYLTLYTFSTENWNR 70
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +EIS L+ L+ S L+ + KN+ ++ VIG+ L ++ LK + T+ N L
Sbjct: 71 PSNEISTLMGLVISSLEDEIF--MKNDARLLVIGDIGRLPSNVQLALKRTINNTKNNKRL 128
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSV------CSHDVDSSLIAKYLDTSDVPDPDL 184
L +A +YS+R EI++A ++I +++ +V + I+++L T+ +PDPDL
Sbjct: 129 TLVVALSYSARWEITKAAQDIACELQQKNVQLNADNIKTYITEETISQHLTTASIPDPDL 188
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+IRTGGE R+S++LLWQ+AY+E F +WPDFS E + A+ + R RRFG
Sbjct: 189 LIRTGGEVRISNYLLWQIAYTELYFCNTFWPDFSEEDLYKAIANFQSRQRRFG 241
>gi|303258059|ref|ZP_07344067.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderiales
bacterium 1_1_47]
gi|302859078|gb|EFL82161.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderiales
bacterium 1_1_47]
Length = 248
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 144/246 (58%), Gaps = 10/246 (4%)
Query: 1 MVASMMSSSP----PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIK 56
M + +++ P P H+ I+MDGNGRWA AR LPR GH+KG+E + AA+ G++
Sbjct: 1 MTSQELTAKPRERVPRHVAIVMDGNGRWAKARKLPRLMGHQKGVESVRTAIQTAAKAGVQ 60
Query: 57 NLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCV 116
+LT+FAFS NW RP E+ L+KL L++ +L K N++VR++G+ + +++
Sbjct: 61 HLTLFAFSSENWNRPAEEVKGLMKLFLVSLRREIAALNKANVRVRLVGDLTAFSEELQQQ 120
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT 176
+ ++ T NTGL L + NY R EI A K S V ++ A L
Sbjct: 121 IADSMKITENNTGLTLNVCVNYGGRWEILEAAKR------SREVPPEELTEQRFASLLPL 174
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
+D D DL IRT GE+R+S+F+LWQ+AY E F WPDF+ F +ALN Y+ R+RRF
Sbjct: 175 ADSGDVDLFIRTSGEERISNFMLWQLAYGELYFTKILWPDFTENEFLNALNWYSNRERRF 234
Query: 237 GGLSKK 242
G S++
Sbjct: 235 GKTSEQ 240
>gi|209526838|ref|ZP_03275358.1| undecaprenyl diphosphate synthase [Arthrospira maxima CS-328]
gi|209492709|gb|EDZ93044.1| undecaprenyl diphosphate synthase [Arthrospira maxima CS-328]
Length = 253
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 140/232 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ +IMDGNGRWA RGLPR GHR+GI+ ++ + GI LT++AFS NW R
Sbjct: 21 PNHVAVIMDGNGRWAKRRGLPRTMGHRRGIDALKNLLRYCRDWGINALTVYAFSTENWGR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P+ E+ L+ L + L + + + +++R +GN L + ++++ + TR N G+
Sbjct: 81 PLEEVDFLMALFERVLMRELEEMMEEEVRIRFVGNLHRLPGSLRECIEKSMETTRNNEGI 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY R+EI RA + I ++ G++ +D +L KYL T+ DPDL+IRT G
Sbjct: 141 LLTVATNYGGREEIVRACQAIANQVKQGTLEPEAIDGALFEKYLYTAGTSDPDLLIRTSG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AY+E WPDF+ F AL Y R+RRFG + +
Sbjct: 201 ELRISNFLLWQIAYAEIYVTETLWPDFNSHEFHLALCSYQQRERRFGKVGTR 252
>gi|298492874|ref|YP_003723051.1| undecaprenyl diphosphate synthase ['Nostoc azollae' 0708]
gi|298234792|gb|ADI65928.1| undecaprenyl diphosphate synthase ['Nostoc azollae' 0708]
Length = 249
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 87/229 (37%), Positives = 137/229 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA ++GLPR GH++G++ +++ + GIK LT +AFS NW+R
Sbjct: 21 PQHVAVIMDGNGRWAKSQGLPRIMGHKRGVDALKDLLHCCKDWGIKALTAYAFSTENWKR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L + L++ + + N++++ +GN +L + + + +T+ N +
Sbjct: 81 PQEEVEFLMSLFQGVLRQELREMVEENVQIQFVGNLQALPTALQEEISRSMAETKDNRSI 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY R EI +A + I Q ++ G + ++ L +L T+ + DPDL+IRT G
Sbjct: 141 KFTVATNYGGRQEILQACRAIAQKVQQGILNPDEISEELFESHLYTAGITDPDLLIRTSG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+FLLWQ+AY E WPDF R+ F AL Y R+RRFG +
Sbjct: 201 EMRLSNFLLWQMAYGEIYITETLWPDFDRKEFQRALCAYQQRERRFGKI 249
>gi|261344731|ref|ZP_05972375.1| di-trans,poly-cis-decaprenylcistransferase [Providencia rustigianii
DSM 4541]
gi|282567173|gb|EFB72708.1| di-trans,poly-cis-decaprenylcistransferase [Providencia rustigianii
DSM 4541]
Length = 250
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/235 (41%), Positives = 142/235 (60%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ S P H+ IIMDGNGRWA RG R GHR G+E V A + I +LT++AF
Sbjct: 7 NLSESMMPKHVAIIMDGNGRWAKQRGKFRITGHRAGVESVRSSVRFAVKNKISSLTLYAF 66
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP E+S L+ L L +L KNN+K+++IG+ + + + +AE
Sbjct: 67 SSENWKRPEKEVSSLMDLFVFALDNEVKNLHKNNVKLKIIGDVSRFSETLRKRIDKAEAL 126
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NTGL L IA NY R +I ++K ++ + G + DVD I++++ D + D
Sbjct: 127 TADNTGLQLNIAANYGGRWDIVNSVKQVYGKVSRGELSIDDVDECAISQHICMHDQENVD 186
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L+IRTGGE R+S+FLLWQVAY+EF F WPDF +F A++ ++ R+RR+GG
Sbjct: 187 LVIRTGGEHRISNFLLWQVAYAEFYFTNVLWPDFDETVFQSAVDAFSQRERRYGG 241
>gi|84496822|ref|ZP_00995676.1| di-trans-poly-cis-decaprenylcistransferase [Janibacter sp.
HTCC2649]
gi|84383590|gb|EAP99471.1| di-trans-poly-cis-decaprenylcistransferase [Janibacter sp.
HTCC2649]
Length = 271
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 91/228 (39%), Positives = 137/228 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I+MDGNGRWA RGLPR GH G ++VA A E G+ +L+ +AFS NW+R
Sbjct: 23 PGHVAIVMDGNGRWANQRGLPRTKGHEAGEGALLDVVAGAIEAGVTHLSTYAFSTENWKR 82
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ L + +++ +G R L ++ L+ A++ TR NTGL
Sbjct: 83 SPDEVRFLMGFNRDVIRRRRDQLHEWGVRMVWVGRRPRLWSSVIKELEIAQELTRHNTGL 142
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L+ NY R E+ A + + +D+ G + + +VD +A+YL D+PD DL +R+ G
Sbjct: 143 TLYFCVNYGGRAELGDAARALAEDVARGRIKARNVDERTLARYLPEPDMPDVDLFVRSSG 202
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S+FLLWQ AY+E VF+ WPDF R + A+ Y RDRR+GG
Sbjct: 203 EQRTSNFLLWQSAYAEMVFLDTLWPDFDRRDLWRAIEIYADRDRRYGG 250
>gi|330998728|ref|ZP_08322457.1| di-trans,poly-cis-decaprenylcistransferase [Parasutterella
excrementihominis YIT 11859]
gi|329576467|gb|EGG57979.1| di-trans,poly-cis-decaprenylcistransferase [Parasutterella
excrementihominis YIT 11859]
Length = 248
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 144/246 (58%), Gaps = 10/246 (4%)
Query: 1 MVASMMSSSP----PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIK 56
M + +++ P P H+ I+MDGNGRWA AR LPR GH+KG+E + AA+ G++
Sbjct: 1 MTSQELTAKPRERVPRHVAIVMDGNGRWAKARKLPRLMGHQKGVESVRTAIQTAAKAGVQ 60
Query: 57 NLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCV 116
+LT+FAFS NW RP E+ L+KL L++ +L K N++VR++G+ + +++
Sbjct: 61 HLTLFAFSSENWNRPAEEVKGLMKLFLVSLRREIAALNKANVRVRLVGDLTAFSEELQQQ 120
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT 176
+ ++ T NTGL L + NY R EI A K S V ++ A L
Sbjct: 121 IADSMKITENNTGLTLNVCVNYGGRWEILEAAKR------SREVPPEELTEQKFASLLPL 174
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
+D D DL IRT GE+R+S+F+LWQ+AY E F WPDF+ F +ALN Y+ R+RRF
Sbjct: 175 ADSGDVDLFIRTSGEERISNFMLWQLAYGELYFTKILWPDFTENEFLNALNWYSNRERRF 234
Query: 237 GGLSKK 242
G S++
Sbjct: 235 GKTSEQ 240
>gi|210633127|ref|ZP_03297694.1| hypothetical protein COLSTE_01607 [Collinsella stercoris DSM 13279]
gi|210159281|gb|EEA90252.1| hypothetical protein COLSTE_01607 [Collinsella stercoris DSM 13279]
Length = 261
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/232 (42%), Positives = 143/232 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IMDGNGRWA ARGL R GH+ GI +++ A +G+ L+ +AFS NW R
Sbjct: 30 PRHVSCIMDGNGRWATARGLGRGEGHKAGIVALQDVITACVRLGVDVLSAYAFSTENWNR 89
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E++ L+ L LK+ N++V +G+ L V + +QT +TG+
Sbjct: 90 PQTEVNLLMHLFAKTFVDELPLLKRENVRVEFLGDISVLPKKTREVFEYGLEQTSDHTGM 149
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY +R E++RA + + +++ +G + D+D S IA +L T+D+PDP+L+IRT G
Sbjct: 150 TLALAVNYGARAELARAARLLAKEVAAGHLSPDDIDESAIADHLYTADLPDPELVIRTSG 209
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E RLS++LLWQVAY+EF YWPDF R A+ + RDRRFGGLS +
Sbjct: 210 EMRLSNYLLWQVAYAEFYLTDTYWPDFDRWGLLRAIAAFQGRDRRFGGLSAR 261
>gi|254670406|emb|CBA05957.1| undecaprenyl pyrophosphate synthetase [Neisseria meningitidis
alpha153]
gi|325203307|gb|ADY98760.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis
M01-240355]
Length = 248
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/240 (40%), Positives = 145/240 (60%), Gaps = 6/240 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + ++ P HI +IMDGNGRWA R LPR GH++G++ +V A++G++ LT+FA
Sbjct: 7 AVLEHTAIPKHIAVIMDGNGRWAKKRFLPRIMGHKRGLDALENMVKHCAKLGVQYLTVFA 66
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP E+S L+ L L+K L +NN++++++G+R IL ++EAE
Sbjct: 67 FSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNMRLKILGSRERFSRQILKGIEEAEA 126
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTGL L IA +Y R +I +A + + S ++ +AK+L + P+P
Sbjct: 127 LTANNTGLTLSIAADYGGRWDILQAANKLIAEGVS------EITEDTLAKHLMLGNAPEP 180
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL IRTGGE R+S+FLLWQ+AY+E F WPDF A+ + R+RRFG S++
Sbjct: 181 DLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDETALDAAVASFQKRERRFGRTSEQ 240
>gi|87199394|ref|YP_496651.1| undecaprenyl pyrophosphate synthetase [Novosphingobium
aromaticivorans DSM 12444]
gi|87135075|gb|ABD25817.1| Undecaprenyl pyrophosphate synthetase [Novosphingobium
aromaticivorans DSM 12444]
Length = 236
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/226 (42%), Positives = 145/226 (64%), Gaps = 8/226 (3%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA R +PR GH++G++ EI AA ++G++ LT++AFS NW+RP
Sbjct: 18 HVAIIMDGNGRWAKKRMMPRAFGHKRGVDTVREIARAARDMGLEALTLYAFSSENWKRPA 77
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
EI++L+ L+++F++ NN ++R+IG+ +L DI+ ++++A +T NTG L
Sbjct: 78 DEIADLMGLLRTFIRNDLDEFVANNTRLRIIGDYQALAPDIVQMIEDAMARTAGNTGTTL 137
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA NY S+ EI+RA E G++ +++ LDT+ +P DL+IRT GE
Sbjct: 138 AIALNYGSQQEIARAAARA---AEKGAITPEAIEAE-----LDTACLPPLDLLIRTSGEI 189
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
RLS+FLLWQ AY+E F WPDF+ AL+Q+ R+RRFGG
Sbjct: 190 RLSNFLLWQAAYAEMWFTDVLWPDFTAAHLRDALDQFTSRERRFGG 235
>gi|227890233|ref|ZP_04008038.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus johnsonii
ATCC 33200]
gi|227849235|gb|EEJ59321.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus johnsonii
ATCC 33200]
Length = 239
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/234 (41%), Positives = 142/234 (60%), Gaps = 3/234 (1%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S P +H+ IIMDGNGRWA R LPR GHR G++ I AA ++GIK LT++AFS
Sbjct: 4 SKKPLNHLAIIMDGNGRWAKKRHLPRFVGHRHGMDNIRNIALAANKLGIKVLTLYAFSTE 63
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP E++ L++L F K L +NN++V ++G L + V ++A +T
Sbjct: 64 NWARPTDEVNYLMRLPIDFFDKFMPELMENNVRVNIMGFVDELPEKTYLVTQKAMAETAN 123
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP---DPD 183
NTG+ L AFNY S EI+ ++ I + ++ G + D+ +++ +L T + DPD
Sbjct: 124 NTGMVLNFAFNYGSHREITAGVQEIARKVKVGEIDIDDISEKMVSDHLLTHSLAPYEDPD 183
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
L+IRT GE+RLS+FLLWQ+AY+EF F + WPDF + + Y R+RRFG
Sbjct: 184 LLIRTSGEERLSNFLLWQMAYTEFSFSDKLWPDFDKTDLEELVKDYQGRNRRFG 237
>gi|239994191|ref|ZP_04714715.1| undecaprenyl diphosphate synthase [Alteromonas macleodii ATCC
27126]
Length = 260
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/230 (41%), Positives = 145/230 (63%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S+ P H+ IIMDGNGRWA +G R GH+ G+E +V A + GI++LT+FAFS N
Sbjct: 20 SAGPKHVAIIMDGNGRWAQKKGKIRTFGHKAGVESVRSVVRFARQNGIESLTLFAFSSEN 79
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W+RP E+S L++L L L KN ++++VIG+ + D ++ +++AED T+ N
Sbjct: 80 WKRPEEEVSVLMELFNLVLNSEAKRLHKNGVRLQVIGDVEAFDAKLVEKIRKAEDMTKDN 139
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L L IA NY R +I A K + ++SG + + + ++ T+++P+ DL+IR
Sbjct: 140 KDLVLNIAANYGGRWDIVNAAKQLATQVKSGELDVESICEDALNAHISTANLPELDLLIR 199
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
TGGE R+S+FLLWQ AY+E F WPDF+ ++F A++ +N+R RRFG
Sbjct: 200 TGGEHRISNFLLWQCAYAELYFTDVLWPDFNEDVFQLAVDDFNVRQRRFG 249
>gi|225024278|ref|ZP_03713470.1| hypothetical protein EIKCOROL_01153 [Eikenella corrodens ATCC
23834]
gi|224943303|gb|EEG24512.1| hypothetical protein EIKCOROL_01153 [Eikenella corrodens ATCC
23834]
Length = 248
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/232 (40%), Positives = 143/232 (61%), Gaps = 6/232 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA R LPR GH++G+ + A AE+G++ LT+FAFS NWRR
Sbjct: 15 PRHVCVIMDGNGRWAKKRLLPRVMGHKRGLTALENLAARCAELGVEYLTVFAFSTENWRR 74
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+KL L + +NN++++VIGNR I+ ++ AE T NTGL
Sbjct: 75 PEDEVSFLMKLFLQALDGKVAKMHQNNLRLKVIGNRSRFPATIVKGIEAAERLTADNTGL 134
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y R +I +A + + +S ++ +++ L ++ P+PDL IRTGG
Sbjct: 135 TLTVAADYGGRWDILQAANRLIAEGKS------EITEEDLSQRLSLAEAPEPDLFIRTGG 188
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+F+LWQ+AY+EF F WPDF F A++ + +R+RRFG S++
Sbjct: 189 ETRISNFMLWQMAYAEFYFTDALWPDFDAAEFDRAISSFRVRERRFGRTSEQ 240
>gi|78184966|ref|YP_377401.1| undecaprenyl pyrophosphate synthase [Synechococcus sp. CC9902]
gi|78169260|gb|ABB26357.1| Undecaprenyl pyrophosphate synthetase [Synechococcus sp. CC9902]
Length = 260
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 145/233 (62%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S+ P H+ +IMDGNGRWA ARGLPR GH+ G+E + ++ GI LT +AFS
Sbjct: 23 SARLPAHVAVIMDGNGRWAKARGLPRVVGHQAGVEALKSTLRQCSDWGIGALTAYAFSTE 82
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP E++ L+ L + L+K SL++ +++R +G+ L + + ++ +A ++T
Sbjct: 83 NWSRPGDEVNFLMTLFEGVLQKELRSLEEEQVRIRFLGDLDGLPEKLQHLIDKATERTAK 142
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N+G++ + NY R E+ RA + + + SG++ ++D + A+ L T+ DPDL+I
Sbjct: 143 NSGIHFNVCTNYGGRRELVRAAQRLAKQAASGTLDPEEIDENSFARELFTAGDQDPDLLI 202
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE R+S+FLLWQ+AY+E +WPDF+ ++ AL Y R+RRFGGL
Sbjct: 203 RTSGEYRISNFLLWQLAYAEIHVTDVFWPDFNADVLKQALLDYQGRNRRFGGL 255
>gi|261416242|ref|YP_003249925.1| undecaprenyl diphosphate synthase [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261372698|gb|ACX75443.1| undecaprenyl diphosphate synthase [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 236
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 96/225 (42%), Positives = 137/225 (60%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA +RGL R GH KG E + V + ++++T++ FS NW RP
Sbjct: 7 HVAIIMDGNGRWARSRGLERFLGHCKGTESTIDAVEVGVNLKLEHMTLYVFSSENWGRPS 66
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+ L+ L+ + K L + N+K+ VIGN + + L+ A D+T NTG+ L
Sbjct: 67 KEVDYLMNLLIEMVVKEIPDLMEKNVKLTVIGNMNRIPEKPRASLQSAIDKTANNTGMQL 126
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A +Y R EI A K+I ++ +G + +++ + AK+L PDPDLIIRTGGE
Sbjct: 127 NLAISYGGRQEIVEATKSIAAEVAAGKLSIDEINDEIFAKHLYLKGAPDPDLIIRTGGEF 186
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RLS++LLWQ AYSEF WPDF++E F A+ +N R+RRFG
Sbjct: 187 RLSNYLLWQAAYSEFYVTNTLWPDFTKEEFMKAVEFFNTRERRFG 231
>gi|161870877|ref|YP_001600051.1| undecaprenyl diphosphate synthase [Neisseria meningitidis 053442]
gi|161596430|gb|ABX74090.1| undecaprenyl diphosphate synthase [Neisseria meningitidis 053442]
Length = 257
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/240 (41%), Positives = 145/240 (60%), Gaps = 6/240 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + ++ P HI +IMDGNGRWA R LPR GH++G++ +V A++G++ LT+FA
Sbjct: 16 AVLEHTAIPKHIAVIMDGNGRWAKKRFLPRIMGHKRGLDALENMVKHCAKLGVQYLTVFA 75
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP E+S L+ L L+K L +NN++++++G+R IL ++EAE
Sbjct: 76 FSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNMRLKILGSRERFSRQILKGIEEAEA 135
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTGL L IA +Y R +I +A + S ++ +AK+L D P+P
Sbjct: 136 LTANNTGLTLSIAADYGGRWDILQAANKLIAKGVS------EITEDTLAKHLMLGDAPEP 189
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL IRTGGE R+S+FLLWQ+AY+E F WPDF + A+ + R+RRFG S++
Sbjct: 190 DLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDGKALDDAVASFQKRERRFGRTSEQ 249
>gi|295693143|ref|YP_003601753.1| undecaprenyl pyrophosphate synthetase [Lactobacillus crispatus ST1]
gi|295031249|emb|CBL50728.1| Undecaprenyl pyrophosphate synthetase [Lactobacillus crispatus ST1]
Length = 244
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 142/229 (62%), Gaps = 3/229 (1%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+H+ IIMDGNGRWA R PR GHR+G++ I AA ++GIK LT++AFS NW RP
Sbjct: 9 NHLAIIMDGNGRWAKKRHRPRFVGHREGMDNVERITLAADKLGIKVLTLYAFSTENWARP 68
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E++ L+ L F K +L +NN+KV ++G L + +++ A +T NTGL
Sbjct: 69 KEEVAYLMNLPVRFFDKYMPTLMENNVKVNIMGYLDKLPEKTYRIVQRAMSETANNTGLI 128
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD---VPDPDLIIRT 188
L AFNY SR EI+ A++ + IE+GS+ S ++ +I+ +L T + DPDL+IRT
Sbjct: 129 LNFAFNYGSRREITSAMQELGGMIEAGSLKSEEITEKMISDHLMTKNFGPYQDPDLLIRT 188
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
GE+R+S+FLLWQ+AYSE F + WPDF + Y R+RRFG
Sbjct: 189 SGEQRISNFLLWQLAYSELAFSEKNWPDFDENDLKKFVEDYKHRNRRFG 237
>gi|257065046|ref|YP_003144718.1| Undecaprenyl pyrophosphate synthetase [Slackia heliotrinireducens
DSM 20476]
gi|256792699|gb|ACV23369.1| Undecaprenyl pyrophosphate synthetase [Slackia heliotrinireducens
DSM 20476]
Length = 259
Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/244 (40%), Positives = 144/244 (59%), Gaps = 11/244 (4%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+++ P H+ +IMDGNGRWA R L R GH+ G+E E++ AA +VG++ LTI++F
Sbjct: 20 ALIEERVPKHVAVIMDGNGRWAKKRLLNRLNGHKAGVEAVRELIRAANDVGVECLTIYSF 79
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP E++ L+ L + L + ++ V +G+ +L D +A ++
Sbjct: 80 STENWKRPEEEVTGLMDLFAKTMLAEVDGLHEEHVVVCPMGDLSALPQDTQDAFMKAWEK 139
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD-------VDSSLIAKYLDT 176
T+ N G+ LF+A NY SR EI A+ I + ++ H+ V L++K+L
Sbjct: 140 TKDNDGMKLFVAVNYGSRKEICDAVNEIVME----AIEQHEETYTVPLVTEELLSKHLYV 195
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
S +PDPDL+IRT GE RLS+FLLWQ+AYSEF WPDF R F AL Y R+RRF
Sbjct: 196 SGIPDPDLLIRTSGEMRLSNFLLWQIAYSEFYCTDTLWPDFDRYEFLRALLDYQSRNRRF 255
Query: 237 GGLS 240
G +S
Sbjct: 256 GAVS 259
>gi|254492640|ref|ZP_05105811.1| undecaprenyl diphosphate synthase [Methylophaga thiooxidans DMS010]
gi|224462161|gb|EEF78439.1| undecaprenyl diphosphate synthase [Methylophaga thiooxydans DMS010]
Length = 247
Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/232 (40%), Positives = 144/232 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R PR GHR G++ IV A+ G+K L++FAFS NWRR
Sbjct: 9 PNHIAIIMDGNGRWAKRRLQPRFMGHRAGVKAVEGIVKHCAQRGVKILSLFAFSSENWRR 68
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L L L NNIK+ +IG+ + + +A+ T NTGL
Sbjct: 69 PGKEVSLLMELFSHALNNQVKKLHDNNIKLCIIGDLEQFSPALQEQITKAQQLTANNTGL 128
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ IA NY R +I+++++ + + + G + + +I+++L T+ +P+PDL IRTGG
Sbjct: 129 IVNIAANYGGRWDITQSVRQLAEQVRLGEITPDAITEDMISQHLTTAALPEPDLFIRTGG 188
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FLLWQ+AY+EF F WP+F+ A+ ++ R+RRFG S++
Sbjct: 189 EQRVSNFLLWQMAYTEFYFTDLLWPEFNANALDLAIASFSQRERRFGRTSEQ 240
>gi|325479301|gb|EGC82397.1| di-trans,poly-cis-decaprenylcistransferase [Anaerococcus prevotii
ACS-065-V-Col13]
Length = 231
Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/235 (41%), Positives = 143/235 (60%), Gaps = 4/235 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M +++ P H+ II+DGNGRWA R +PR GH+ G + +I A E G+K L+++AFS
Sbjct: 1 MENTNIPKHVAIILDGNGRWAKKRLMPRTFGHKNGADNVVDICLYAKERGVKYLSLYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+ L+KL+ F+ + L K N K+ +G+ L +D + + ++T
Sbjct: 61 TENWKRPDEEVGYLMKLVIKFINEKIDILMKENCKLLFLGDLSKLPEDTKDICLKGMEKT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N G+ L IA NY RDEI A +++ D V ++ LI+ YL T PDPDL
Sbjct: 121 SKNDGITLNIALNYGGRDEIVNAFRHMLDD----GVEKTEISEELISDYLYTKGQPDPDL 176
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IR GGE RLS+FL++Q+AYSE F WPDF+R+ F AL ++ R+RR+GGL
Sbjct: 177 LIRPGGELRLSNFLIYQLAYSELYFTDTLWPDFTRDSFDQALEEFARRNRRYGGL 231
>gi|227495130|ref|ZP_03925446.1| undecaprenyl pyrophosphate synthetase [Actinomyces coleocanis DSM
15436]
gi|226831582|gb|EEH63965.1| undecaprenyl pyrophosphate synthetase [Actinomyces coleocanis DSM
15436]
Length = 254
Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 94/235 (40%), Positives = 139/235 (59%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P H+ IIMDGNGRWA RGLPR GHR+G + +A A E+G+K+LT++AFS N
Sbjct: 17 SGVPQHVAIIMDGNGRWANERGLPRTEGHRQGEIALMDTIAGAVEIGVKHLTVYAFSTEN 76
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRR E+ L+ + ++ L + +++ G R L ++ L+ A + T N
Sbjct: 77 WRRSPQEVRFLMGYSRDVIRCRATELNEWGVRINWWGRRPRLWKSVINELEAAHELTADN 136
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T L+ +A NY R EI+ A+ + ++E+G + + + AK L PD DL+IR
Sbjct: 137 TALDFNMAVNYGGRAEITDAVNQVAHEVEAGRLTAGHISEGAFAKRLYAPGAPDVDLLIR 196
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE+R+S+FLLWQ AY+EF F P WP+++RE + + + R+RRFGG K
Sbjct: 197 TGGEQRISNFLLWQCAYAEFSFNPLPWPEYNREALWDDILAFTGRERRFGGAVDK 251
>gi|227878825|ref|ZP_03996732.1| undecaprenyl pyrophosphate synthetase [Lactobacillus crispatus
JV-V01]
gi|256843347|ref|ZP_05548835.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus crispatus
125-2-CHN]
gi|256849834|ref|ZP_05555265.1| undecaprenyl pyrophosphate synthetase [Lactobacillus crispatus
MV-1A-US]
gi|262046920|ref|ZP_06019880.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus crispatus
MV-3A-US]
gi|293381208|ref|ZP_06627216.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus crispatus
214-1]
gi|312978247|ref|ZP_07789991.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus crispatus
CTV-05]
gi|227861573|gb|EEJ69185.1| undecaprenyl pyrophosphate synthetase [Lactobacillus crispatus
JV-V01]
gi|256614767|gb|EEU19968.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus crispatus
125-2-CHN]
gi|256713323|gb|EEU28313.1| undecaprenyl pyrophosphate synthetase [Lactobacillus crispatus
MV-1A-US]
gi|260572902|gb|EEX29462.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus crispatus
MV-3A-US]
gi|290922248|gb|EFD99242.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus crispatus
214-1]
gi|310894965|gb|EFQ44035.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus crispatus
CTV-05]
Length = 244
Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 142/229 (62%), Gaps = 3/229 (1%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+H+ IIMDGNGRWA R PR GHR+G++ I AA ++GIK LT++AFS NW RP
Sbjct: 9 NHLAIIMDGNGRWAKKRHRPRFVGHREGMDNVERITLAADKLGIKVLTLYAFSTENWARP 68
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E++ L+ L F K +L +NN+KV ++G L + +++ A +T NTGL
Sbjct: 69 KEEVAYLMNLPVRFFDKYMPTLMENNVKVNIMGYLDELPEKTYRIVQRAMSETANNTGLI 128
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD---VPDPDLIIRT 188
L AFNY SR EI+ A++ + IE+GS+ S ++ +I+ +L T + DPDL+IRT
Sbjct: 129 LNFAFNYGSRREITSAMQELGGMIEAGSLKSEEITEKMISDHLMTKNFGPYQDPDLLIRT 188
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
GE+R+S+FLLWQ+AYSE F + WPDF + Y R+RRFG
Sbjct: 189 SGEQRISNFLLWQLAYSELAFSEKNWPDFDENDLKKFVEDYKHRNRRFG 237
>gi|312143674|ref|YP_003995120.1| undecaprenyl diphosphate synthase [Halanaerobium sp. 'sapolanicus']
gi|311904325|gb|ADQ14766.1| undecaprenyl diphosphate synthase [Halanaerobium sp. 'sapolanicus']
Length = 239
Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/231 (41%), Positives = 142/231 (61%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
PP +I IIMDGNGRWA R L R GH++G++ +IV AA+ +K+LT++AFS NW+
Sbjct: 3 PPQNIAIIMDGNGRWAKKRKLARREGHKEGVKTLKKIVKYAAKKNVKSLTVYAFSTENWK 62
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP SE++ L+ L+K +++ L +K+ +G + +L ++ ++ E ++R N
Sbjct: 63 RPKSEVNFLLALMKKTMREEVDELLAEGVKINFLGRKDALSKKLIKEIELIEIKSRKNNN 122
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L IAFNY R EI A K +F D + + ++ YL D+ + +L+IRTG
Sbjct: 123 LVLNIAFNYGGRAEIVDAAKKLFLDYQDNNFDLDELSCEDFGDYLYQQDLKNIELLIRTG 182
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
GEKRLS+FLLWQ AY+E F +YWPDF F AL + R+RRFGGL+
Sbjct: 183 GEKRLSNFLLWQAAYAELYFTDKYWPDFGEADFDLALKDFKKRERRFGGLN 233
>gi|325137019|gb|EGC59615.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis M0579]
Length = 248
Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 100/240 (41%), Positives = 145/240 (60%), Gaps = 6/240 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + ++ P HI +IMDGNGRWA R LPR GH++G++ +V A++G++ LT+FA
Sbjct: 7 AVLEHTAIPKHIAVIMDGNGRWAKKRFLPRIMGHKRGLDALENMVKHCAKLGVQYLTVFA 66
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP E+S L+ L L+K L +NN++++++G+R IL ++EAE
Sbjct: 67 FSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNMRLKILGSRERFSRQILKGIEEAEA 126
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTGL L IA +Y R +I +A + E S + D +AK+L + P+P
Sbjct: 127 LTANNTGLTLSIAADYGGRWDILQAANKLI--AEGVSKITEDT----LAKHLMLGNAPEP 180
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL IRTGGE R+S+FLLWQ+AY+E F WPDF A+ + R+RRFG S++
Sbjct: 181 DLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDETALDAAVASFQKRERRFGRTSEQ 240
>gi|262068168|ref|ZP_06027780.1| di-trans,poly-cis-decaprenylcistransferase [Fusobacterium
periodonticum ATCC 33693]
gi|291378111|gb|EFE85629.1| di-trans,poly-cis-decaprenylcistransferase [Fusobacterium
periodonticum ATCC 33693]
Length = 230
Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/234 (41%), Positives = 141/234 (60%), Gaps = 7/234 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M + P H+ IIMDGNGRWA RGL R GH +G + + E+G+K LT++AFS
Sbjct: 1 MEKNIPQHVAIIMDGNGRWAKKRGLARSFGHMEGAKSLRRALEYFTEIGVKYLTVYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+S L+KL ++K ++ KN I+ V G + ++ + +L +++ +++T+
Sbjct: 61 ENWSRPKDEVSTLMKLFLKYIKSERKNMMKNKIRFFVSGRKNNIPEKLLNEIEKLKEETK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N + L IAFNY SR EI A+ +I +D ++ +KYL +D PDPDL+
Sbjct: 121 DNDKITLNIAFNYGSRAEIIDAVNDIIKD------GKENITEEDFSKYL-YNDFPDPDLL 173
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRT GE R+S+FLLWQ+AYSE WPDF + A+ YN RDRRFGG+
Sbjct: 174 IRTSGEMRISNFLLWQIAYSELYITDTLWPDFDEKEIDKAIETYNQRDRRFGGV 227
>gi|330959203|gb|EGH59463.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 251
Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 93/235 (39%), Positives = 145/235 (61%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
SS P H+ IIMDGN RWA R LP AGH+ G++ ++ AE ++ LT+FAFS N
Sbjct: 10 SSVPRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAEAKVEVLTLFAFSSEN 69
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W+RP E+ L++L + L++ L +N+I +R+IG+R ++ ++EAE +T N
Sbjct: 70 WQRPAEEVGALMELFFTALRRETKRLNENDISLRIIGDRSRFHPELQAAMREAEVRTSGN 129
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+ L IA NY + +I++A + + +++++G + ++ L+ L T D+P PDL IR
Sbjct: 130 SRFVLQIAANYGGQWDIAQAAQRLAREVQAGHLQPDEITPDLLQSCLATGDLPLPDLCIR 189
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE R+S+FLLWQ+AY+E F +WPDF + AL + R RRFG S++
Sbjct: 190 TGGEHRISNFLLWQLAYAELYFSDLFWPDFKHDAMRVALADFASRQRRFGKTSEQ 244
>gi|296110432|ref|YP_003620813.1| di-trans-poly-cis-decaprenylcistransferase [Leuconostoc kimchii
IMSNU 11154]
gi|295831963|gb|ADG39844.1| di-trans-poly-cis-decaprenylcistransferase [Leuconostoc kimchii
IMSNU 11154]
Length = 258
Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/234 (41%), Positives = 139/234 (59%), Gaps = 3/234 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
PDHI IIMDGNGRWA R +PR AGH+ G+ +I AA+ +G+K LT++AFS NW R
Sbjct: 20 PDHIAIIMDGNGRWAKRRLMPRVAGHKTGMNTVKKIATAASNLGVKVLTLYAFSTENWSR 79
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L++L F + L KNNI+V++IGN L ++ A QT +G+
Sbjct: 80 PNDEVNFLMQLPVDFFSEFVPDLIKNNIRVQIIGNIDELPKSTRHAVQNAIVQTSQGSGM 139
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD---VPDPDLIIR 187
L A NY + EI A K + Q + G + +D++ L ++ L T+ + PDL+IR
Sbjct: 140 ILNFALNYGGQIEIVEATKKLAQQVADGDISPNDINGDLFSEALQTASLGKLAAPDLMIR 199
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
T GE RLS+F+ +Q AY+E F WPDF+ + A+ + RDRRFGGL K
Sbjct: 200 TSGELRLSNFMPYQSAYAELYFTDVLWPDFTADDLLQAITAFTSRDRRFGGLDK 253
>gi|162450825|ref|YP_001613192.1| undecaprenyl pyrophosphate synthetase [Sorangium cellulosum 'So ce
56']
gi|161161407|emb|CAN92712.1| Undecaprenyl pyrophosphate synthetase [Sorangium cellulosum 'So ce
56']
Length = 246
Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/233 (40%), Positives = 141/233 (60%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M SS+ P H+ II+DGNGRWAAARGLPR AGH+ G + V A + GI LT++AFS
Sbjct: 1 MTSSNLPKHVAIILDGNGRWAAARGLPRMAGHQHGAKAVRLSVRACRDRGIPYLTLYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
+ NW RP EI L+++ + F + L + I V+V+G+ + +++ + T
Sbjct: 61 VANWSRPKDEIDALMRICQEFAEGEHDELIRRGIAVQVVGDLEDIPTPTRRAMEKLVEDT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
T + L +A +Y R +++ A++ + +G V +++ + +L TS +PDPDL
Sbjct: 121 AGGTEMTLALALSYGGRRDMANAMRALAVRARAGLVIPEEINEKSLRNFLTTSSMPDPDL 180
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IIRTGGEKRLSDFLL++ AY+E F WPDF+ E F A+ Y+ R RR+G
Sbjct: 181 IIRTGGEKRLSDFLLFEAAYAELFFTDTLWPDFTEETFEEAVATYSRRQRRYG 233
>gi|118586855|ref|ZP_01544289.1| undecaprenyl pyrophosphate synthetase [Oenococcus oeni ATCC
BAA-1163]
gi|118432687|gb|EAV39419.1| undecaprenyl pyrophosphate synthetase [Oenococcus oeni ATCC
BAA-1163]
Length = 254
Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 104/232 (44%), Positives = 136/232 (58%), Gaps = 3/232 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA + PR GH+ G++ I AA +G+K LT+FAFS NW R
Sbjct: 20 PEHVAIIMDGNGRWAKRQHKPRIFGHKAGMQNVKTIALAANNLGVKVLTLFAFSTENWGR 79
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+KL F L +NNIKV IG L + A + T+ NTGL
Sbjct: 80 PQDEVNYLMKLPIDFFNTFVPELIENNIKVEGIGEIDDLPEKTRQAFLNAVEDTKDNTGL 139
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD---PDLIIR 187
L A NY R EI A K+I + G + + D+D L L T+ + + PDLIIR
Sbjct: 140 ILNFAINYGGRTEIVDATKSIVNQVLQGKIKTEDIDEKLFQNNLLTNTLAEKANPDLIIR 199
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
T GE+R+S+FLLWQ AYSEF F P+ WPD++ E AL Y+ RDRRFG +
Sbjct: 200 TSGEQRISNFLLWQSAYSEFYFSPKLWPDYTAEDLEEALAAYSNRDRRFGKI 251
>gi|221133310|ref|ZP_03559615.1| undecaprenyl diphosphate synthase [Glaciecola sp. HTCC2999]
Length = 251
Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/232 (42%), Positives = 140/232 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA +G R GH+ G+E V A I LT+FAFS NW+R
Sbjct: 18 PEHVAIIMDGNGRWAKQKGKLRTFGHKAGVESVRASVRFARTHKITALTLFAFSSENWKR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+KL K L L N ++++V+G+ D ++ +K+AE T+ NT L
Sbjct: 78 PQDEVSVLMKLFKLVLTSEVKKLHANGVRLKVVGDLSPFDPKLVQKIKDAEALTQHNTEL 137
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L IA NY R +I A +++ Q + SG + D++ + +D+P DL+IRTGG
Sbjct: 138 HLNIAANYGGRWDIVNAAQSLAQQVASGKLNPEDINETSFNANTAFADLPALDLLIRTGG 197
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
EKR+S+FLLWQ AYSEF F WPDF+ F A+ +N R RRFG +S++
Sbjct: 198 EKRISNFLLWQCAYSEFYFTDTLWPDFNENSFLDAVISFNERQRRFGKISEQ 249
>gi|296327939|ref|ZP_06870474.1| Di-trans,poly-cis-decaprenylcistransferase [Fusobacterium nucleatum
subsp. nucleatum ATCC 23726]
gi|296154895|gb|EFG95677.1| Di-trans,poly-cis-decaprenylcistransferase [Fusobacterium nucleatum
subsp. nucleatum ATCC 23726]
Length = 230
Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/235 (41%), Positives = 140/235 (59%), Gaps = 7/235 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M + P HI IIMDGNGRWA RGL R GH +G + + + E+G+K LT++AFS
Sbjct: 1 MEKNIPKHIAIIMDGNGRWAKKRGLARSFGHMEGAKTLRKALEYLTEIGVKYLTVYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+S L+KL ++K ++ KN I+ V G + ++ + + +++ E++T+
Sbjct: 61 ENWNRPQEEVSTLMKLFLKYIKNERKNMMKNKIRFFVSGRKNNVPEKLQKEIEKLEEETK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N + L IAFNY SR EI A+ I +D ++ +KYL +D PDPDL+
Sbjct: 121 NNDKITLNIAFNYGSRAEIVDAVNRIIKD------GKENITEEDFSKYL-YNDFPDPDLV 173
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IRT GE R+S+FLLWQ+AYSE WPDF + A+ YN R+RRFGG+
Sbjct: 174 IRTSGEMRISNFLLWQIAYSELYITDVLWPDFDEKEIDKAIESYNQRERRFGGVK 228
>gi|319953661|ref|YP_004164928.1| undecaprenyl pyrophosphate synthase [Cellulophaga algicola DSM
14237]
gi|319422321|gb|ADV49430.1| Undecaprenyl pyrophosphate synthase [Cellulophaga algicola DSM
14237]
Length = 246
Score = 195 bits (496), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 94/232 (40%), Positives = 140/232 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA G R GH G++ ++V + ++ I LT++ FS NW+R
Sbjct: 13 PKHLAIIMDGNGRWAKQHGKLRVFGHENGVKTVRDVVESCVKMKIPYLTLYTFSTENWKR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EI L++L+ S L+K S N IK+ IGN SL L + +T NTG+
Sbjct: 73 PKFEIDTLMRLLVSSLRKELPSFMDNGIKLNTIGNIASLPKRAHKELLDVIQKTSSNTGM 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y +R+E+ AI+ I +++ + S ++D ++I +L T D+PD DL+IRT G
Sbjct: 133 TLTLALSYGAREELQNAIREISIKVKNNIISSENIDETIINTHLYTHDLPDVDLLIRTSG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AY+E F WPDF+ + A+ Y R+RRFG S++
Sbjct: 193 EHRISNFLLWQIAYAELYFTNVLWPDFTEQHLVEAILNYQNRERRFGKTSEQ 244
>gi|322514265|ref|ZP_08067326.1| di-trans,poly-cis-decaprenylcistransferase [Actinobacillus ureae
ATCC 25976]
gi|322119877|gb|EFX91891.1| di-trans,poly-cis-decaprenylcistransferase [Actinobacillus ureae
ATCC 25976]
Length = 237
Score = 195 bits (496), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 97/228 (42%), Positives = 138/228 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R GH+ G++ V+ AA+ GIK LT++AFS NW R
Sbjct: 9 PQHVAIIMDGNGRWAKQQGKLRVFGHQNGVKTVRSAVSFAAKHGIKVLTLYAFSSENWSR 68
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+S L+ L L L KNNI++++IG++ + + + E+E T NTGL
Sbjct: 69 PEAEVSALMSLFMRALDSEVKKLHKNNIRLKIIGDKKGFSESLQKRIAESEALTAENTGL 128
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY +I++A + + ++ G + D+ + L T + P DL+IRT G
Sbjct: 129 ILNIAANYGGYWDITQAAQQLAVKVKLGEISISDITAERFQNALVTGEQPQVDLLIRTSG 188
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R+S+FLLWQ+AY+E F P WPDF+ E F A+ Y RDRRFGG
Sbjct: 189 EQRISNFLLWQIAYAELFFSPVLWPDFNDESFSEAIIAYQQRDRRFGG 236
>gi|262039197|ref|ZP_06012517.1| di-trans,poly-cis-decaprenylcistransferase [Leptotrichia
goodfellowii F0264]
gi|261746813|gb|EEY34332.1| di-trans,poly-cis-decaprenylcistransferase [Leptotrichia
goodfellowii F0264]
Length = 231
Score = 195 bits (496), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 98/237 (41%), Positives = 141/237 (59%), Gaps = 6/237 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M P H+ IIMDGNGRWA +G R GHR+G +I+ + ++G+K LT++AFS
Sbjct: 1 MDLKIPKHVAIIMDGNGRWAKEKGKIRLEGHRQGAINLEKIIEHSVKIGVKYLTVYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP E++ L++L +L SLKK I++ V G + ++ + +L ++E E
Sbjct: 61 ENWKRPEKEVNGLMELFAKYLDTKKKSLKKQGIRLLVTGTKENISEKLLKKIEETEKYLE 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
+ IAFNY R EI AI I +D VD A+YL ++PDP+L+
Sbjct: 121 DCEKMIFNIAFNYGGRKEIIDAINKIIKD------KKETVDEKEFARYLYRPEIPDPELV 174
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRT GE R+S+FLLW++AYSEF YWPDF+ E + A+ +N RDRR+GGL+ K
Sbjct: 175 IRTSGEFRISNFLLWEIAYSEFYVTDVYWPDFTPEEYDKAILAFNKRDRRYGGLNVK 231
>gi|139439764|ref|ZP_01773155.1| Hypothetical protein COLAER_02186 [Collinsella aerofaciens ATCC
25986]
gi|133774914|gb|EBA38734.1| Hypothetical protein COLAER_02186 [Collinsella aerofaciens ATCC
25986]
Length = 228
Score = 195 bits (496), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 96/224 (42%), Positives = 134/224 (59%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA +RGL R GH+ GI EI+ A +G+ L+ +AFS NW RP E++
Sbjct: 1 MDGNGRWATSRGLARTEGHKAGIVSLREIITACVRLGVDVLSAYAFSTENWNRPQHEVNV 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ L LK+ N++V +G+ +L V + + +TG+ L +A N
Sbjct: 61 LMHLFAKTFIDELPLLKRENVRVVFLGDISALPKKTRDVFERGLAECADHTGMTLALAVN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y +R EI+RA++ I D +G + +D ++A +L T+ +PDP+L+IRT GE RLS++
Sbjct: 121 YGARAEITRAVRQIALDAAAGKIDPGAIDDDMVASHLYTAGLPDPELVIRTSGELRLSNY 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
LLWQVAYSEF YWPDF R A+ Y RDRRFGGLSK
Sbjct: 181 LLWQVAYSEFYVTDTYWPDFDRWGLVDAILAYQGRDRRFGGLSK 224
>gi|169333880|ref|ZP_02861073.1| hypothetical protein ANASTE_00266 [Anaerofustis stercorihominis DSM
17244]
gi|169259445|gb|EDS73411.1| hypothetical protein ANASTE_00266 [Anaerofustis stercorihominis DSM
17244]
Length = 238
Score = 195 bits (496), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 98/231 (42%), Positives = 143/231 (61%), Gaps = 4/231 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA +G R GH+ G + +I+ A ++ IK+LT++AFS NW+R
Sbjct: 12 PEHLAIIMDGNGRWAKQKGKIRSFGHKFGAKTVKDIIRAVNDLNIKHLTLYAFSTENWKR 71
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ ++ L+ +L K L K N+K+ IG+ S+ + + + ++T+ +GL
Sbjct: 72 PKDEVTTIMNLVVEYLNKETDDLIKENVKMDFIGDIGSMPEKTRISMNDTIERTKNGSGL 131
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
N+ IA NY R EI A K I + E C D+D L +KYL SD + DL+IRTGG
Sbjct: 132 NVHIALNYGGRKEIVNAAKEIIK--EGIDAC--DLDEELFSKYLYNSDNTEVDLLIRTGG 187
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
+ R+S+FLLWQVAYSE F WPDF++E A+ + ++RRFGGL K
Sbjct: 188 DIRISNFLLWQVAYSELYFCDTLWPDFTKEELHKAIYSFQHKERRFGGLVK 238
>gi|303247583|ref|ZP_07333854.1| undecaprenyl diphosphate synthase [Desulfovibrio fructosovorans JJ]
gi|302491063|gb|EFL50957.1| undecaprenyl diphosphate synthase [Desulfovibrio fructosovorans JJ]
Length = 238
Score = 195 bits (496), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 105/231 (45%), Positives = 132/231 (57%), Gaps = 4/231 (1%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S S P H+ IIMDGNGRWA RGLPR GHR G E I+ E+GI +LT++AFS
Sbjct: 4 SMSLPRHVAIIMDGNGRWATMRGLPRSEGHRAGTEAARGIITRCRELGIGHLTLYAFSKE 63
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP E+ L L+ FL + L K +I+ R++G L VL +T
Sbjct: 64 NWGRPADEVKFLFDLLVRFLTRETDMLLKQSIRFRLLGEMADLPLAARKVLGHVIAKTAH 123
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
T + L +A NYS RDEI RA +++ + V DV ++ L T+ PDPDLII
Sbjct: 124 CTEMTLNLALNYSGRDEILRACRSLMRQ----GVAPEDVTEERLSAELYTAGQPDPDLII 179
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GEKRLS +LLWQ YSEF F WPDF+ + F AL+ Y R RRFG
Sbjct: 180 RTSGEKRLSGYLLWQSTYSEFSFPETLWPDFTPDHFEAALHDYQNRTRRFG 230
>gi|152999981|ref|YP_001365662.1| undecaprenyl diphosphate synthase [Shewanella baltica OS185]
gi|160874602|ref|YP_001553918.1| undecaprenyl diphosphate synthase [Shewanella baltica OS195]
gi|217974056|ref|YP_002358807.1| undecaprenyl diphosphate synthase [Shewanella baltica OS223]
gi|151364599|gb|ABS07599.1| undecaprenyl diphosphate synthase [Shewanella baltica OS185]
gi|160860124|gb|ABX48658.1| undecaprenyl diphosphate synthase [Shewanella baltica OS195]
gi|217499191|gb|ACK47384.1| undecaprenyl diphosphate synthase [Shewanella baltica OS223]
gi|315266843|gb|ADT93696.1| undecaprenyl diphosphate synthase [Shewanella baltica OS678]
Length = 275
Score = 195 bits (496), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 144/233 (61%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
++ S P H+ IIMDGNGRWA +G PR GH+ G++ V+ A+++GI++LT+FAFS
Sbjct: 31 LVKQSLPKHVAIIMDGNGRWAQTQGKPRVLGHKAGVKAVRRAVSTASQLGIESLTLFAFS 90
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRRP E+S L++L + L++ L KN +K+++IG+ + + A+++T
Sbjct: 91 SENWRRPDKEVSLLMELFFTVLQREIKLLHKNQVKLKIIGDISRFSARLQKQIAAAQEKT 150
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NTGL L +A NY R +I +A + + + +E+G + S ++ +L + + DL
Sbjct: 151 SGNTGLVLNVAANYGGRWDILQAAQKLAEKVETGEMTSSQFTEEALSAHLCMQNQSEVDL 210
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+IRTGG+ R+S+F+LWQ AY+E VF WPDF + F A+ + R RRFG
Sbjct: 211 MIRTGGDCRISNFVLWQAAYAELVFTDTLWPDFDEQAFHEAIAIFASRQRRFG 263
>gi|19704661|ref|NP_604223.1| undecaprenyl pyrophosphate synthetase [Fusobacterium nucleatum
subsp. nucleatum ATCC 25586]
gi|42559837|sp|Q8RE08|UPPS_FUSNN RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|19714967|gb|AAL95522.1| Undecaprenyl pyrophosphate synthetase [Fusobacterium nucleatum
subsp. nucleatum ATCC 25586]
Length = 230
Score = 195 bits (496), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 98/235 (41%), Positives = 140/235 (59%), Gaps = 7/235 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M + P HI IIMDGNGRWA RGL R GH +G + + + E+G+K LT++AFS
Sbjct: 1 MEKNIPKHIAIIMDGNGRWAKKRGLARSFGHMEGAKTLRKALEYLTEIGVKYLTVYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+S L+KL ++K ++ KN I+ V G + ++ + + +++ E++T+
Sbjct: 61 ENWNRPQDEVSTLMKLFLKYIKNERKNMMKNKIRFFVSGRKNNVPEKLQKEIEKLEEETK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N + L IAFNY SR EI A+ I +D ++ +KYL +D PDPDL+
Sbjct: 121 NNDKITLNIAFNYGSRAEIVDAVNRIIKD------GKENITEEDFSKYL-YNDFPDPDLV 173
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IRT GE R+S+FLLWQ+AYSE WPDF + A+ YN R+RRFGG+
Sbjct: 174 IRTSGEMRISNFLLWQIAYSELYITDVLWPDFDEKEIDKAIESYNQRERRFGGVK 228
>gi|315924485|ref|ZP_07920706.1| di-trans,poly-cis-decaprenylcistransferase [Pseudoramibacter
alactolyticus ATCC 23263]
gi|315622189|gb|EFV02149.1| di-trans,poly-cis-decaprenylcistransferase [Pseudoramibacter
alactolyticus ATCC 23263]
Length = 239
Score = 195 bits (496), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 94/229 (41%), Positives = 140/229 (61%), Gaps = 4/229 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R PR GH ++ + A+++GI+ LT++AFS NW+R
Sbjct: 14 PAHVAIIMDGNGRWAKQRKRPRIFGHYTAMKAVRGTIRTASDMGIRVLTLYAFSTENWKR 73
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+S L+ L + K +L ++++VRVIG++ L + + +QT+ NTG+
Sbjct: 74 SQEEVSGLMNLAIDYFIKEVTNLDDHDVQVRVIGDQSILPERLQKAAANMVEQTKGNTGM 133
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R++I +A++ I + + + + A +L T+ +PDPDL+IRT G
Sbjct: 134 VLNIALNYGGREDILQAVRQIVAE----GIVPEAITEQVFADHLYTAGLPDPDLVIRTSG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+RLS+FLLWQ AY+EF+F P WPDF LF + Y RDRR+GG+
Sbjct: 190 EERLSNFLLWQNAYAEFIFDPVLWPDFDETLFCKLIAAYQQRDRRYGGV 238
>gi|186686028|ref|YP_001869224.1| undecaprenyl pyrophosphate synthase [Nostoc punctiforme PCC 73102]
gi|186468480|gb|ACC84281.1| undecaprenyl diphosphate synthase [Nostoc punctiforme PCC 73102]
Length = 249
Score = 195 bits (496), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 85/227 (37%), Positives = 137/227 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA +GLPR GH++G++ +++ + GI+ LT +AFS NW+R
Sbjct: 21 PQHVAVIMDGNGRWAKRQGLPRIMGHKRGVDALKDLLRCCQDWGIQALTAYAFSTENWKR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L + L++ + + N++++ +GN +L + + + ++T+ N G+
Sbjct: 81 PQEEVDFLMTLFQRVLRQELREMVEENVQIKFVGNLQALPRSLQQEISRSMEETKDNRGI 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY R EI +A + I + ++ G + +++ + +L T+ + DPDL+IRT G
Sbjct: 141 RFSVATNYGGRQEILQACQAIAKQVQQGLLQPDEINEQVFESHLYTAGITDPDLLIRTSG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E RLS+FLLWQ+AY E WPDF R F AL Y R+RRFG
Sbjct: 201 EMRLSNFLLWQMAYGEIYITDALWPDFDRAEFHRALCAYQQRERRFG 247
>gi|288916967|ref|ZP_06411339.1| undecaprenyl diphosphate synthase [Frankia sp. EUN1f]
gi|288351676|gb|EFC85881.1| undecaprenyl diphosphate synthase [Frankia sp. EUN1f]
Length = 265
Score = 195 bits (496), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 95/230 (41%), Positives = 140/230 (60%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+GI+MDGNGRWA RGLPR GH G + + V A E+G++ L+++AFS NW+R
Sbjct: 34 HVGIVMDGNGRWAKLRGLPRTKGHEAGEDSLFDCVEGAIEMGVRWLSVYAFSTENWKRSP 93
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E++ L++ + + + ++VR G R L +++ L+ AE+ TR N L L
Sbjct: 94 DEVAFLMRFTDGVFGRRIDDMHELGVRVRWAGRRPRLWGNVIRRLEAAEELTRDNDRLTL 153
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+ NY R E++ A I +D+ G + ++ +A+YLD D+PD DL+IRT GE+
Sbjct: 154 VMCVNYGGRAELADAAAAIARDVRDGRLRPERINEETVARYLDEPDMPDVDLLIRTSGEQ 213
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RLS+FLLWQ AY+EF F+P WPDF R + A +Y RDRR+GG+ K
Sbjct: 214 RLSNFLLWQAAYAEFSFVPTLWPDFDRRDLWLACEEYARRDRRYGGVVAK 263
>gi|160947397|ref|ZP_02094564.1| hypothetical protein PEPMIC_01331 [Parvimonas micra ATCC 33270]
gi|158446531|gb|EDP23526.1| hypothetical protein PEPMIC_01331 [Parvimonas micra ATCC 33270]
Length = 238
Score = 195 bits (496), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 95/229 (41%), Positives = 146/229 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA R LPR AGH++G+ +IV ++G++ LT++AFS NW+R
Sbjct: 10 PKHIGIIMDGNGRWAKNRFLPRIAGHKEGMNRVVDIVEECCKIGVRTLTLYAFSTENWKR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ ++ ++ + +NNI RVIG+ L D I+ +L+++ ++++ N G+
Sbjct: 70 PEEEVNGLMNILVIYINSQLKRILENNIVFRVIGDYSKLPDSIVKLLEDSINKSKNNNGM 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R EI +IK ++ DI +++ KYL T + D DL+IRTG
Sbjct: 130 VLNIALNYGGRAEIIASIKKLYDDILKEKFSIDNLNEESFKKYLYTKENSDVDLMIRTGN 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
EKR+S+FL++Q+AYSEF F WP+F + + A+ + R+RRFGG+
Sbjct: 190 EKRISNFLIYQLAYSEFYFTDILWPEFYADDLYDAIYDFQNRNRRFGGI 238
>gi|89075416|ref|ZP_01161833.1| putative undecaprenyl diphosphate synthase [Photobacterium sp.
SKA34]
gi|89048832|gb|EAR54402.1| putative undecaprenyl diphosphate synthase [Photobacterium sp.
SKA34]
Length = 253
Score = 195 bits (496), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/240 (41%), Positives = 145/240 (60%), Gaps = 10/240 (4%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + + P+HI +IMDGNGRWA A+G R GH+ G+E + V+ A +GIK LT+FA
Sbjct: 8 AGLSADCLPNHIAVIMDGNGRWAKAKGKARVFGHKAGVEAVRKTVSTANRLGIKALTLFA 67
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP +E+S L++L + L + L KNNI++R+IG++ + + AE
Sbjct: 68 FSSENWRRPEAEVSLLMELFMTVLSREVKRLHKNNIQLRIIGDKRRFSQRLQDKISAAEK 127
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQ-----DIESGSVCSHDVDSSLIAKYLDTS 177
T NTG+ L IA NY + +I A K + Q +++ +V D++S L T
Sbjct: 128 LTADNTGMVLNIAANYGGQWDILEAAKKLAQHAIDNELDLATVTEQDLESG-----LSTY 182
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+P+ DL+IRT GE R+S+F+LWQ AY+E F E+WPDF F +A+ + R+RRFG
Sbjct: 183 GLPEVDLLIRTSGECRISNFMLWQTAYAELFFTEEHWPDFDESSFLNAVAWFVTRERRFG 242
>gi|315633609|ref|ZP_07888899.1| undecaprenyl diphosphate synthase [Aggregatibacter segnis ATCC
33393]
gi|315477651|gb|EFU68393.1| undecaprenyl diphosphate synthase [Aggregatibacter segnis ATCC
33393]
Length = 239
Score = 195 bits (496), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 94/228 (41%), Positives = 136/228 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R GH+ G+ E V+ A ++G+K LT++AFS NW R
Sbjct: 10 PQHVAIIMDGNGRWAKQQGKMRVFGHKNGVAAVREAVSYARKIGVKYLTLYAFSSENWNR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L L L KN+I+++++G+ + +K+AE T NT L
Sbjct: 70 PEQEVSALMSLFMQALDFEVKKLHKNDIRLKILGDISRFSAGLQEKIKKAEKLTENNTAL 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I +A + + + + + + D++ L+ +YL T D P+ DL+IRT G
Sbjct: 130 RLNIAANYGGRWDIVQAAQQLAEQVRAQQITVADINEDLLQQYLVTKDEPEVDLLIRTSG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R+S+FLLWQ AY+E F WPDF+ F A+ Y R RRFGG
Sbjct: 190 EQRISNFLLWQTAYAELYFSDVLWPDFNEAEFHQAILSYQQRHRRFGG 237
>gi|163856843|ref|YP_001631141.1| undecaprenyl pyrophosphate synthase [Bordetella petrii DSM 12804]
gi|163260571|emb|CAP42873.1| undecaprenyl pyrophosphate synthetase [Bordetella petrii]
Length = 254
Score = 195 bits (495), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 91/236 (38%), Positives = 140/236 (59%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ + P H+ IIMDGNGRWA R LPR AGH KG++ +V A G++ LT+FAFS
Sbjct: 12 TQAVPQHVAIIMDGNGRWATRRHLPRTAGHAKGVQAVRRVVEACGRRGVRYLTLFAFSSE 71
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+S L++L L++ L + +++ V+G+ + + ++ +A+ +T
Sbjct: 72 NWRRPPEEVSLLMRLFVQALEREVDKLNEQGVRLHVVGDMSRFEPRLQALIADAQVRTAA 131
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N L+L +A NY R +I +A + + + +D S +A++L + P+PDL I
Sbjct: 132 NDRLHLSVAANYGGRWDILQATRAMLSQHPELARDPQRIDESHLAEHLSMAWAPEPDLFI 191
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE+R+S+FL+WQ+AY+E F +YWPDF A Y R+RRFG S +
Sbjct: 192 RTGGEQRISNFLIWQLAYAELYFTDQYWPDFGAAELDAAFEWYRTRERRFGRTSAQ 247
>gi|119505670|ref|ZP_01627740.1| undecaprenyl diphosphate synthase [marine gamma proteobacterium
HTCC2080]
gi|119458482|gb|EAW39587.1| undecaprenyl diphosphate synthase [marine gamma proteobacterium
HTCC2080]
Length = 260
Score = 195 bits (495), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 88/227 (38%), Positives = 141/227 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA+ RGLP AGHR G+E + + GI+ LT+FAFS NW R
Sbjct: 16 PRHIAIIMDGNGRWASRRGLPVPAGHRAGVEAVRSALKGCKDKGIEVLTLFAFSSENWGR 75
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L+ L+ +L++ L+++++++R IG R L + ++ +E+ T NTG
Sbjct: 76 PETEVRALMALLCHYLRREVEQLQRDSVRLRFIGRRDRLSLRLQRLMIRSEEATAANTGA 135
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y + ++ A++ + ++ +G++ + +++S + L D+P PDL IRTGG
Sbjct: 136 TLVLAVDYGGQWDVIDAVRKLASEVAAGTLSADEINSDRFEQTLSLGDLPPPDLCIRTGG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+ R+S+F+LWQ+AY+EF F WPDF A+ + R+RRFG
Sbjct: 196 DARISNFMLWQLAYTEFYFCEALWPDFDEAALTRAIEDFQSRERRFG 242
>gi|33596178|ref|NP_883821.1| undecaprenyl pyrophosphate synthetase [Bordetella parapertussis
12822]
gi|33601586|ref|NP_889146.1| undecaprenyl pyrophosphate synthetase [Bordetella bronchiseptica
RB50]
gi|33573181|emb|CAE36833.1| undecaprenyl pyrophosphate synthetase [Bordetella parapertussis]
gi|33576022|emb|CAE33102.1| undecaprenyl pyrophosphate synthetase [Bordetella bronchiseptica
RB50]
Length = 297
Score = 195 bits (495), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 142/232 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R LPR AGH KG+ +V A G++ LT+FAFS NWRR
Sbjct: 59 PRHVAIIMDGNGRWATRRHLPRTAGHAKGVHAVRRVVEACGRRGVRYLTLFAFSSENWRR 118
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L L++ L+ +++ V+G+ + + + ++ +A+++T N L
Sbjct: 119 PADEVSLLMRLFVQALEREVDKLQDQGVRLHVVGDLSAFEPKLQELIAQAQERTEHNDRL 178
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L +A NY R +I +A + + + + +D + +A++L + P+PDL IRTGG
Sbjct: 179 HLTVAANYGGRWDILQATRAMLRADPGLAQDPDRIDEARLAEHLSMAWAPEPDLFIRTGG 238
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FL+WQ+AY+EF F ++WPDF + A Y R+RRFG S +
Sbjct: 239 EQRISNFLVWQLAYAEFYFTEQFWPDFGADELDAAFEWYRTRERRFGRTSAQ 290
>gi|33592521|ref|NP_880165.1| undecaprenyl pyrophosphate synthetase [Bordetella pertussis Tohama
I]
gi|42559772|sp|Q7VYC6|UPPS_BORPE RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|42559773|sp|Q7WA56|UPPS_BORPA RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|42559774|sp|Q7WJ90|UPPS_BORBR RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|33572167|emb|CAE41713.1| undecaprenyl pyrophosphate synthetase [Bordetella pertussis Tohama
I]
gi|332381939|gb|AEE66786.1| undecaprenyl pyrophosphate synthetase [Bordetella pertussis CS]
Length = 254
Score = 195 bits (495), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 142/232 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R LPR AGH KG+ +V A G++ LT+FAFS NWRR
Sbjct: 16 PRHVAIIMDGNGRWATRRHLPRTAGHAKGVHAVRRVVEACGRRGVRYLTLFAFSSENWRR 75
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L L++ L+ +++ V+G+ + + + ++ +A+++T N L
Sbjct: 76 PADEVSLLMRLFVQALEREVDKLQDQGVRLHVVGDLSAFEPKLQELIAQAQERTEHNDRL 135
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L +A NY R +I +A + + + + +D + +A++L + P+PDL IRTGG
Sbjct: 136 HLTVAANYGGRWDILQATRAMLRADPGLAQDPDRIDEARLAEHLSMAWAPEPDLFIRTGG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FL+WQ+AY+EF F ++WPDF + A Y R+RRFG S +
Sbjct: 196 EQRISNFLVWQLAYAEFYFTEQFWPDFGADELDAAFEWYRTRERRFGRTSAQ 247
>gi|296269160|ref|YP_003651792.1| undecaprenyl diphosphate synthase [Thermobispora bispora DSM 43833]
gi|296091947|gb|ADG87899.1| undecaprenyl diphosphate synthase [Thermobispora bispora DSM 43833]
Length = 261
Score = 195 bits (495), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 95/228 (41%), Positives = 136/228 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA ARGLPR GH++G +++ A E+GI L+ FAFS NW+R
Sbjct: 23 PRHVAIIMDGNGRWAKARGLPRTEGHKRGEYSLFDVIQGAIELGIPYLSAFAFSTENWKR 82
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ L + ++VR G R L ++ L++AE TR NT L
Sbjct: 83 SPEEVRFLMGFNRDVIRRRRDELHEMGVRVRWAGRRTRLWRSVIKELEDAERLTRNNTTL 142
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L NY R EI+ A + +D+ +G V + + A+YLD D+PD DL IR+ G
Sbjct: 143 TLQFCVNYGGRAEITDAAARLARDVAAGRVNPDKITEKVFARYLDEPDIPDVDLFIRSSG 202
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R+S+FLLWQ AY+E VF+ WPDF R + A + R+RR+GG
Sbjct: 203 EQRVSNFLLWQSAYAEMVFLDRLWPDFDRRDLWEACRIFAKRERRYGG 250
>gi|169795683|ref|YP_001713476.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase)
[Acinetobacter baumannii AYE]
gi|169148610|emb|CAM86476.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase)
[Acinetobacter baumannii AYE]
Length = 250
Score = 195 bits (495), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 145/232 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGN R+A + + GHR+G V + IV + G++ LT+FAFS NW R
Sbjct: 10 PQHVAIIMDGNNRFAKKNQMQKGDGHREGKNVLDPIVEHCVKTGVRALTVFAFSSENWNR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL++ + + +KK NI +R IG+R L ++ ++++AE QT + +
Sbjct: 70 PQYEVDLLMKLLEETIHEQIPRMKKFNIALRFIGDRSRLPSHLVALMEDAEQQTAHHEAM 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA +Y +I+ A K + Q + G + + ++ L AKY++ +D+P DL+IRTGG
Sbjct: 130 TLTIAVSYGGMWDIANAAKQVAQAVSRGEIDADQINVDLFAKYVNLNDLPAVDLLIRTGG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+ R+S+FLLWQ AY+E F WP+F+ E F HALN ++ R+RRFG S++
Sbjct: 190 DFRISNFLLWQAAYAELYFTDTLWPEFTVEEFDHALNVFSGRERRFGKTSEQ 241
>gi|116617797|ref|YP_818168.1| undecaprenyl pyrophosphate synthetase [Leuconostoc mesenteroides
subsp. mesenteroides ATCC 8293]
gi|116096644|gb|ABJ61795.1| Undecaprenyl pyrophosphate synthetase [Leuconostoc mesenteroides
subsp. mesenteroides ATCC 8293]
Length = 259
Score = 195 bits (495), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 99/233 (42%), Positives = 139/233 (59%), Gaps = 3/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R +PR AGH+ G+ I +AA+++G+K LT++ FS NW R
Sbjct: 20 PEHIAIIMDGNGRWAKKRLMPRAAGHKAGMNTVKRIASAASDMGVKVLTLYVFSTENWSR 79
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L++L +F L KNNI+V V GN +L + A ++T TG+
Sbjct: 80 PNDEVNFLMQLPIAFFNDFVPDLIKNNIRVSVTGNVDALPAATQDAVNRAIEETASGTGM 139
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS---DVPDPDLIIR 187
L A NY + EI A K I +++ G + D++S + A L T+ D+ PDL+IR
Sbjct: 140 VLNFAMNYGGQIEIVDATKKIAEEVAKGHLSPDDINSEVFAAALQTAHLGDLATPDLMIR 199
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
T GE RLS+FL +Q AY+E F WPD+S + A+ Y RDRRFGGL+
Sbjct: 200 TSGELRLSNFLPYQAAYAELYFTDVLWPDYSSDDLMTAIQSYTKRDRRFGGLN 252
>gi|326791506|ref|YP_004309327.1| undecaprenyl diphosphate synthase [Clostridium lentocellum DSM
5427]
gi|326542270|gb|ADZ84129.1| undecaprenyl diphosphate synthase [Clostridium lentocellum DSM
5427]
Length = 238
Score = 195 bits (495), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 94/235 (40%), Positives = 140/235 (59%), Gaps = 2/235 (0%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M + P+HI +IMDGNGRWA RGLPR GHR+G + I+ A ++G+K LT++AFS
Sbjct: 1 MSNRKIPEHIAVIMDGNGRWAKERGLPRNEGHRRGTKTLESIIKHAEKIGVKYLTVYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS--LDDDILCVLKEAED 122
NW+RP E++ L+ L + +L + + R IG+ + + I + + E+
Sbjct: 61 TENWKRPEEEVAGLMNLFERYLDNHIKKASGDMNRFRAIGDLEATVIPKRIKEKVIQLEE 120
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T+ TG+ +AFNY RDEI RA K I + ++ + D++ YLDT +P+P
Sbjct: 121 MTKDKTGICFNMAFNYGGRDEIVRACKKIAEQVKQNKLDIADINEVCFEDYLDTKGMPEP 180
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRT GE R S+FL WQ++Y+EF F WPDF+ + A++ +N R RRFG
Sbjct: 181 DLLIRTSGEMRTSNFLPWQLSYTEFYFASCLWPDFNTKELDKAIDAFNERQRRFG 235
>gi|225619144|ref|YP_002720370.1| undecaprenyl pyrophosphate synthetase [Brachyspira hyodysenteriae
WA1]
gi|225213963|gb|ACN82697.1| undecaprenyl pyrophosphate synthetase [Brachyspira hyodysenteriae
WA1]
Length = 240
Score = 195 bits (495), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 106/232 (45%), Positives = 140/232 (60%), Gaps = 3/232 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA + R GHR G E IV A+ E+ IK LT++AFS NW+R
Sbjct: 9 PAHVAIIMDGNGRWAKSHNKSRSLGHRAGSENVINIVEASCELNIKYLTLYAFSTENWKR 68
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL---N 127
P E L KL+K F KK L NNI V+ IG+ + D + ++E E +T N
Sbjct: 69 PEEEKKALFKLLKEFYKKEIKRLISNNILVKHIGDISAFPKDTIETIEETEKETLEKCKN 128
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L + +A NY RDE+ AIKNI D + + ++D + I YL T +PDPD IIR
Sbjct: 129 PILTVILALNYGFRDELKNAIKNICHDTINNKIDIENIDENFIQNYLYTKGIPDPDFIIR 188
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
T GE RLS+FL++Q +YSE F WPDFS+E F A+ +Y+ R+RR+GGL
Sbjct: 189 TSGESRLSNFLMYQASYSELYFTDILWPDFSKEDFKKAIEEYSNRNRRYGGL 240
>gi|300311497|ref|YP_003775589.1| undecaprenyl pyrophosphate synthetase [Herbaspirillum seropedicae
SmR1]
gi|300074282|gb|ADJ63681.1| undecaprenyl pyrophosphate synthetase protein [Herbaspirillum
seropedicae SmR1]
Length = 252
Score = 195 bits (495), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 99/236 (41%), Positives = 143/236 (60%), Gaps = 4/236 (1%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+S+ P H+ IIMDGNGRWA R LPR AGH KG++ IV A AE GI+ LT+FAFS
Sbjct: 13 TSAVPRHVAIIMDGNGRWATKRFLPRVAGHAKGVDAVRSIVEACAERGIEFLTLFAFSSE 72
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+S L++L + L++ + N I+++++G+ D + + +AE QT
Sbjct: 73 NWRRPADEVSVLMRLFMTVLEREVGKMAANGIRLKIVGDMSRFDPKLQEMAAKAEAQTAA 132
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N+ L L + NY R ++ +A+ + +D + D +A YL + P+PDL I
Sbjct: 133 NSRLTLTVCANYGGRWDVMQAVSKMIKDKPGHA----DFTEEELAPYLAMAYAPEPDLFI 188
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE+R+S+FLLWQ+AYSE F +WPDF + A+ Y R+RRFG S +
Sbjct: 189 RTGGEQRISNFLLWQLAYSELYFTETFWPDFDAKALDLAIASYQQRERRFGRTSAQ 244
>gi|32491136|ref|NP_871390.1| hypothetical protein WGLp387 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|42559972|sp|Q8D2G7|UPPS_WIGBR RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|25166343|dbj|BAC24533.1| yaeS [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 260
Score = 195 bits (495), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 95/234 (40%), Positives = 145/234 (61%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P HI IIMDGNGRWA RG R GH+ G+E + + A + LT++AFS NW
Sbjct: 10 NKPRHIAIIMDGNGRWAKNRGKLRIFGHKAGVESAKKAIKFAINNHLNALTLYAFSSENW 69
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP+ E+S+L++L S L S KKNNI++++IG+ + + +K++E T N
Sbjct: 70 KRPIQEVSDLMELFSSVLNNAIDSFKKNNIRLKIIGDISKFNLKLQKYIKKSEKITYKNN 129
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GLNL IA NY R +I + +K I + ++ G + ++ S +++ +++ DL+IRT
Sbjct: 130 GLNLNIAANYGGRWDIIQGVKKIAKQVKKGIIYPDQINESNFCRFICMNELVPVDLVIRT 189
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GGE R+S+FLLWQ+AYSE F WPDF +F +A+N + R+RRFG ++ K
Sbjct: 190 GGEHRISNFLLWQIAYSELFFTDVLWPDFDHVIFSNAINSFAKRERRFGKINSK 243
>gi|332653364|ref|ZP_08419109.1| di-trans,poly-cis-decaprenylcistransferase [Ruminococcaceae
bacterium D16]
gi|332518510|gb|EGJ48113.1| di-trans,poly-cis-decaprenylcistransferase [Ruminococcaceae
bacterium D16]
Length = 248
Score = 195 bits (495), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 93/229 (40%), Positives = 133/229 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA RGLPR AGH G E F I ++G+ LT++AFS NW+R
Sbjct: 20 PRHIAIIMDGNGRWAKKRGLPRTAGHAAGAENFRTIATYCKDIGLDYLTVYAFSTENWKR 79
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ ++ L+K +L + ++++ +K+ G+ L ++ + + + ++ G
Sbjct: 80 PAEEVGAIMGLLKKYLLEAIGRMERDRVKMEFFGDLSPLTPELRELCERTREISKHYEGC 139
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ I NY RDE+ RA + QD G + + S + YL + VPDPDL+IR G
Sbjct: 140 QVNICLNYGGRDELLRAARAYAQDCLEGKADPNHLGESEFSDYLFSRGVPDPDLVIRPSG 199
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+FLLWQ AY+EF F WPDFS+E A+ + R RRFGG+
Sbjct: 200 ELRLSNFLLWQSAYAEFYFTDVLWPDFSKEELHKAIAAFQGRSRRFGGV 248
>gi|326336680|ref|ZP_08202848.1| di-trans,poly-cis-decaprenylcistransferase [Capnocytophaga sp. oral
taxon 338 str. F0234]
gi|325691150|gb|EGD33121.1| di-trans,poly-cis-decaprenylcistransferase [Capnocytophaga sp. oral
taxon 338 str. F0234]
Length = 242
Score = 195 bits (495), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 139/232 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R GH KG +I+ +++GI LT++ FS NW+R
Sbjct: 9 PKHLAIIMDGNGRWAKQQGKKRIFGHEKGARTVRKIIEEVSQIGIPYLTLYTFSSENWKR 68
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L+ +LKK ++KNN+++ IG+ SL I L++A + T+ NT
Sbjct: 69 PKLEVDALMHLLSRYLKKEMAVMQKNNVRLNAIGDLQSLPKSIQRELQKAMELTQNNTKT 128
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ +A Y + EI + ++ + Q +E G + D+ +++ + L T +P DL+IRT G
Sbjct: 129 TVSLALGYGGQQEILQMVQRVAQKVEKGELSPCDITPNIVEESLYTKGIPPVDLLIRTSG 188
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AY+E F WPDF+ E AL Y R+RRFG S++
Sbjct: 189 EYRISNFLLWQIAYAELYFTNVLWPDFTPEELHKALLDYQNRERRFGKTSEQ 240
>gi|317153888|ref|YP_004121936.1| undecaprenyl diphosphate synthase [Desulfovibrio aespoeensis
Aspo-2]
gi|316944139|gb|ADU63190.1| undecaprenyl diphosphate synthase [Desulfovibrio aespoeensis
Aspo-2]
Length = 236
Score = 194 bits (494), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 105/236 (44%), Positives = 140/236 (59%), Gaps = 10/236 (4%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M S + P H+ IIMDGNGRWA RGLPR GH+ G E +V E+G+K+LT++ FS
Sbjct: 1 MQSITAPTHVAIIMDGNGRWAKQRGLPRTEGHKAGTEAARAVVTRCRELGVKHLTLYTFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCV---LKEAE 121
NW RP E+ L L+ +FL + SLKK +I++RV+G +DD + V LK
Sbjct: 61 KENWARPKDEVRTLFDLLTTFLTREESSLKKQSIRLRVLGE---IDDMPMAVRQTLKHVM 117
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
QT + L +A NYS RDEI RA + + + G+ + + A+ L T+ PD
Sbjct: 118 RQTAKCEAMTLNLALNYSGRDEILRAARAL---VAKGTAPDAITEEAFAAE-LWTAGQPD 173
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDLIIRT GE RLS++LL+Q AYSEF F YWPDF+ + AL + R RRFG
Sbjct: 174 PDLIIRTSGEMRLSNYLLFQCAYSEFYFTDIYWPDFTPDELDKALVELAGRRRRFG 229
>gi|146281915|ref|YP_001172068.1| undecaprenyl diphosphate synthase [Pseudomonas stutzeri A1501]
gi|145570120|gb|ABP79226.1| undecaprenyl diphosphate synthase [Pseudomonas stutzeri A1501]
Length = 281
Score = 194 bits (494), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 137/227 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGN RWA R LP AGH+ G++ ++ A+ G++ LT+FAFS NW+R
Sbjct: 41 PRHVAIIMDGNNRWAKRRLLPGVAGHKAGVDAVRAVIEVCADSGVEVLTLFAFSSENWQR 100
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L S L++ L +N I++R+IG+R ++ + E E+ T N
Sbjct: 101 PADEVGALMELFLSALRREARKLDENGIRLRIIGDRSRFHPELQAAMSEVEEMTAANHRF 160
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY + +I +A +++ + ++G + ++ +L YL T D+P PDL IRTGG
Sbjct: 161 VLQVAANYGGQWDILQAAQHLATEAQAGRLNPAEITPALFQSYLATGDMPLPDLCIRTGG 220
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+R+S+FLLWQ+AY+E F YWPDF AL + R RRFG
Sbjct: 221 ERRISNFLLWQLAYAELYFSDLYWPDFKHVAMRKALADFATRQRRFG 267
>gi|284051894|ref|ZP_06382104.1| undecaprenyl pyrophosphate synthase [Arthrospira platensis str.
Paraca]
Length = 253
Score = 194 bits (494), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 139/232 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ +IMDGNGRWA RGLPR GHR+GI+ ++ + GI LT++AFS NW R
Sbjct: 21 PNHVAVIMDGNGRWAKRRGLPRTMGHRRGIDALKNLLRYCRDWGINALTVYAFSTENWGR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P+ E+ L+ L + L + + + +++R +GN L + ++++ + TR N G+
Sbjct: 81 PLEEVDFLMALFERVLMRELEEMMEEEVRIRFVGNLHRLPASLRECIEKSMETTRNNEGI 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY R+EI RA + I ++ G++ +D +L KYL T+ DPDL+IRT G
Sbjct: 141 LFTVATNYGGREEIVRACQAIANQVKQGTLEPEAIDGALFEKYLYTAGTCDPDLLIRTSG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AY+E WPDF+ F AL Y R+RRFG + +
Sbjct: 201 ELRISNFLLWQIAYAEIYVTDTLWPDFNSHEFHQALCSYQQRERRFGKVGTR 252
>gi|256827505|ref|YP_003151464.1| undecaprenyl diphosphate synthase [Cryptobacterium curtum DSM
15641]
gi|256583648|gb|ACU94782.1| undecaprenyl diphosphate synthase [Cryptobacterium curtum DSM
15641]
Length = 289
Score = 194 bits (494), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 101/262 (38%), Positives = 145/262 (55%), Gaps = 33/262 (12%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA ARG R +GH+ GIE E++ A++VG++ LTI++FS NWRR
Sbjct: 28 PAHVAVIMDGNGRWAKARGKNRLSGHKAGIEAVRELIRCASDVGVRYLTIYSFSSENWRR 87
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L + L K +++V IG +L +EA + TR NTG+
Sbjct: 88 PQDEVTGLMDLFARTMLAEARGLHKEHVRVMTIGRTEALPPKTRAAFEEAWELTRDNTGM 147
Query: 131 NLFIAFNYSSRDEISRAIKNIFQD-----------------IESGSVCSHDVDSSL---- 169
L +A NY +R EI A + + E+ + D+SL
Sbjct: 148 TLVVAVNYGARTEIVDAYNALMVERFSATPGKSHTDLSGITEETAGLTVDGFDASLTEAI 207
Query: 170 ------------IAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDF 217
I+++L T+D+PDPDL+IRT GE R+S+FLLWQ+AY+EF WPDF
Sbjct: 208 EHAKLPRITEEDISRHLYTADMPDPDLLIRTSGEMRVSNFLLWQIAYAEFYVTDTLWPDF 267
Query: 218 SRELFFHALNQYNLRDRRFGGL 239
R F AL Y +R+RR+GG+
Sbjct: 268 DRYEFLRALLSYQVRERRWGGV 289
>gi|116072465|ref|ZP_01469732.1| Di-trans-poly-cis-decaprenylcistransferase [Synechococcus sp.
BL107]
gi|116064987|gb|EAU70746.1| Di-trans-poly-cis-decaprenylcistransferase [Synechococcus sp.
BL107]
Length = 260
Score = 194 bits (494), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 91/229 (39%), Positives = 140/229 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA A+GLPR GHR G+E + ++ GI LT +AFS NW R
Sbjct: 27 PAHVAVIMDGNGRWAKAKGLPRVVGHRAGVEALKSTLRQCSDWGIGALTAYAFSTENWSR 86
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L + L+ SL+ +++R +G+ L + + ++ +A ++T NTG+
Sbjct: 87 PGDEVNFLMTLFERVLQSELRSLEDEQVRIRFLGDLDGLPEKLQVLIDDATERTAKNTGI 146
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ + NY R E+ RA + + + SG++ +D + A+ L T+ DPDL+IRT G
Sbjct: 147 HFNVCTNYGGRRELVRAAQRLAKQAASGTIDPEAIDENSFARELFTAGDQDPDLLIRTSG 206
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+FLLWQ+AY+E +WPDF+ ++ AL Y R+RRFGGL
Sbjct: 207 EYRISNFLLWQLAYAEIHVTDVFWPDFNADVLKQALLDYQGRNRRFGGL 255
>gi|87124748|ref|ZP_01080596.1| Undecaprenyl pyrophosphate synthetase (UPPS) [Synechococcus sp.
RS9917]
gi|86167627|gb|EAQ68886.1| Undecaprenyl pyrophosphate synthetase (UPPS) [Synechococcus sp.
RS9917]
Length = 266
Score = 194 bits (494), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 92/240 (38%), Positives = 140/240 (58%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ A + +S P HI +IMDGNGRWA ARGLPR GHR G+E + ++ G+ LT
Sbjct: 17 LPADLDASRLPAHIAVIMDGNGRWAQARGLPRVMGHRAGVEALKTTLRLCSDWGVSALTA 76
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP E++ L+ L + L++ +L+ +++R +G+ +L + ++ EA
Sbjct: 77 YAFSTENWSRPGDEVNFLMTLFERVLQRELEALEAEQVRIRFLGDLQALPPRLQDLIAEA 136
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+T N G++ + NY R E+ RA +++ + G + +D + +A L T+
Sbjct: 137 TARTDENAGIHFNVCTNYGGRRELVRAARHLAEQAARGELDPAQIDENRLAAELFTAGEQ 196
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GE+R+S+FLLWQ+AY+E +WPDF AL Y R RRFGGL
Sbjct: 197 DPDLLIRTSGERRISNFLLWQLAYAEIHVTEVFWPDFDHAALLAALRDYQSRSRRFGGLQ 256
>gi|254480175|ref|ZP_05093423.1| undecaprenyl pyrophosphate synthetase 1 [marine gamma
proteobacterium HTCC2148]
gi|214039737|gb|EEB80396.1| undecaprenyl pyrophosphate synthetase 1 [marine gamma
proteobacterium HTCC2148]
Length = 260
Score = 194 bits (494), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 136/227 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGN RWA G+P AGHR G+E I+ A G++ LT+FAFS NW R
Sbjct: 19 PRHVAIIMDGNNRWAKRNGVPGPAGHRAGVEAVRNILRACRNHGVEVLTVFAFSSENWGR 78
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P+ E+ L+ L+ +L+ L K+ I++R IG R + +++++E T NT
Sbjct: 79 PLPEVRALLALLSRYLRSEVRELNKDGIRLRFIGERTRFSARLQRLMQQSEHLTAGNTEA 138
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA +Y + +I++A + + ++++G + D+ LI ++ +D+P PDL IRTGG
Sbjct: 139 TLVIAVDYGGQWDIAQATQKLALEVQAGRLVPQDITPELIDSHISVADLPRPDLCIRTGG 198
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+ R+S+F+LWQ AYSE F WPDF F AL Y+ R+RRFG
Sbjct: 199 DARISNFMLWQFAYSELYFTNTLWPDFGELEFARALADYSRRERRFG 245
>gi|154250176|ref|YP_001411001.1| undecaprenyl diphosphate synthase [Fervidobacterium nodosum
Rt17-B1]
gi|154154112|gb|ABS61344.1| undecaprenyl diphosphate synthase [Fervidobacterium nodosum
Rt17-B1]
Length = 239
Score = 194 bits (494), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 94/239 (39%), Positives = 144/239 (60%), Gaps = 3/239 (1%)
Query: 5 MMSSSP---PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
MM++S P HI IMDGNGRWA +G PR GH G ++V A G+K T +
Sbjct: 1 MMNNSTNNVPIHIAFIMDGNGRWAKKQGKPRTYGHYVGAYKIEDVVKWCANRGVKYTTFY 60
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP+ E++ + L+++ + + + + K +++R IG L + E E
Sbjct: 61 AFSTENWKRPMEEVNFIFGLLENKIHEFYERMNKEGVRLRFIGRIDKLPSSLKDKCLEYE 120
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T+ N+ + + +AFNY R+EI IK + +D + G++ +D + YL DVPD
Sbjct: 121 EKTKNNSRIQVIMAFNYGGRNEIIDGIKRLMEDTKKGNITPDKLDENSFRNYLYAPDVPD 180
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
PDL+IRT GE R+S+FL+WQ+AYSE F WP+F+ E A+++Y+ RDRRFGG+
Sbjct: 181 PDLVIRTSGEMRISNFLIWQIAYSELYFSKLLWPEFTEEELQKAIDEYSNRDRRFGGIK 239
>gi|256372046|ref|YP_003109870.1| undecaprenyl diphosphate synthase [Acidimicrobium ferrooxidans DSM
10331]
gi|256008630|gb|ACU54197.1| undecaprenyl diphosphate synthase [Acidimicrobium ferrooxidans DSM
10331]
Length = 241
Score = 194 bits (494), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 96/236 (40%), Positives = 139/236 (58%), Gaps = 5/236 (2%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
++ P H+ +MDGNGRWA GLPR GH G ++V A EVG++ LT++AFS
Sbjct: 10 TTRVPLHVAFVMDGNGRWAQRYGLPRTQGHAAGETALFDVVEGALEVGVRWLTVYAFSTE 69
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNR-LSLDDDILCVLKEAEDQTR 125
NWRRP E+ L+ +S L++ L +++R +G R + + + A + T
Sbjct: 70 NWRRPPDEVRFLMNFNRSLLRRRRDELNDRGVRIRFLGRRSRRVPPSVTREMDLAAELTA 129
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N L L +AFNY R EI A++ I + V + +D S +A +L D+PDPDL+
Sbjct: 130 HNDRLTLTMAFNYGGRAEIVDALRRIVAE----GVPARAIDESTVASHLYFPDMPDPDLV 185
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
+RT GE R+S+FLLWQ+AY+E VF+ WPD RE F A+ +Y RDRRFGG+ +
Sbjct: 186 VRTSGEYRISNFLLWQLAYAELVFLDTLWPDVRREHLFEAIAEYQGRDRRFGGVGR 241
>gi|323143564|ref|ZP_08078241.1| di-trans,poly-cis-decaprenylcistransferase [Succinatimonas hippei
YIT 12066]
gi|322416627|gb|EFY07284.1| di-trans,poly-cis-decaprenylcistransferase [Succinatimonas hippei
YIT 12066]
Length = 247
Score = 194 bits (494), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 103/232 (44%), Positives = 136/232 (58%), Gaps = 2/232 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG+ R GH++G + AAA++G+ +LT+FAFS NW+R
Sbjct: 14 PRHVAIIMDGNGRWAEQRGMSRVKGHKEGAAAVRRTIEAAAKLGVHSLTLFAFSSENWKR 73
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+S L++L LKK L KNNIK +VIG+ L + + + E+ T NTGL
Sbjct: 74 PQTEVSALMELFSLSLKKETPVLHKNNIKAKVIGDVLRFNSGLQKAIHVLEETTAGNTGL 133
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I A + I I G V +D++ K L S D DL+IRTGG
Sbjct: 134 ELNIAANYGGRWDIVEACRKILDQISCGQVTKNDLNEEYFNKQL--SLPQDIDLLIRTGG 191
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ AYSE WPDF E A ++ R+RRFG S +
Sbjct: 192 EMRISNFLLWQCAYSELYVTDVLWPDFDEEELTKAFLFFSGRERRFGMTSAQ 243
>gi|300728299|ref|ZP_07061665.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella bryantii
B14]
gi|299774411|gb|EFI71037.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella bryantii
B14]
Length = 256
Score = 194 bits (494), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 142/231 (61%), Gaps = 6/231 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWAA RG R GH+ G++ I + +G+K LT++ FS NW R
Sbjct: 11 PEHIAIIMDGNGRWAAERGKDRSYGHQAGVDAVRRITSECTRLGVKYLTLYTFSTENWNR 70
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +EI+ L+ L+ + L+ + KNN++ VIG+ L + + LKE T NT +
Sbjct: 71 PETEIAALMGLVLTSLEDEIFM--KNNVRFLVIGDMERLPEKVQEKLKETMAHTANNTTM 128
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDVPDPDLII 186
+ +A +YSSR EI++A + I ++ D++S + + ++++T +PDP+L+I
Sbjct: 129 TMVVALSYSSRWEITKACREIAIEMVKQGKSIEDINSLITEDTLTEHMETKFMPDPELLI 188
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RTGGE R+S++LLWQ+AY+E F YWPDFS + A+ Y R RRFG
Sbjct: 189 RTGGELRISNYLLWQIAYTELYFCDTYWPDFSEDDLHRAIISYQSRQRRFG 239
>gi|311113588|ref|YP_003984810.1| di-trans,poly-cis-decaprenylcistransferase [Rothia dentocariosa
ATCC 17931]
gi|310945082|gb|ADP41376.1| di-trans,poly-cis-decaprenylcistransferase [Rothia dentocariosa
ATCC 17931]
Length = 231
Score = 194 bits (494), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 94/225 (41%), Positives = 135/225 (60%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA RGLPR GHR G +IVA A E+GI ++ +AFS NW+R SE+S
Sbjct: 1 MDGNGRWANERGLPRNEGHRAGEAALLDIVAGAIEMGIPYISAYAFSTENWKRSPSEVSF 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
+++ L + +LK +++R G R L +++ L++ E +T NT L + N
Sbjct: 61 IMRFSTEVLNRQLETLKSWGVRIRWAGRRPKLWKNVISQLEQCERETINNTTCTLTMCVN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R EI+ A I QD+++G + + KYLD D+PD DL +R+ GE+R+S+F
Sbjct: 121 YGGRAEIADAAATIAQDVQAGILNPSSITEKTFQKYLDEPDLPDVDLFLRSSGEQRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
LLWQ AY+EFVF+ WPD R + A+ +Y RDRR+GG + K
Sbjct: 181 LLWQSAYAEFVFMNVLWPDVDRLTLYKAVEEYASRDRRYGGATDK 225
>gi|82701794|ref|YP_411360.1| undecaprenyl diphosphate synthase [Nitrosospira multiformis ATCC
25196]
gi|82409859|gb|ABB73968.1| Undecaprenyl pyrophosphate synthetase [Nitrosospira multiformis
ATCC 25196]
Length = 265
Score = 194 bits (494), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 96/235 (40%), Positives = 136/235 (57%), Gaps = 9/235 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R +PR AGH++G+E + A E G+K LT+FAFS NWRR
Sbjct: 18 PQHVAIIMDGNGRWAKNRFMPRMAGHKRGVETVRSAIRACMERGVKYLTLFAFSSENWRR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L++L S L++ L +N I+ +VIG+ + I+ ++ E T N
Sbjct: 78 PPEEVAFLMQLFISVLEQEVSKLHENGIRFKVIGDLSKFEPKIVEFIRNGEALTAANERF 137
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSH---DVDSSLIAKYLDTSDVPDPDLIIR 187
L IA NY R +I +A++ + + C H D + +Y + P+PDL IR
Sbjct: 138 TLTIAANYGGRWDIMQAVRKMLAE------CPHLATTFDEKDLMQYFALNHAPEPDLFIR 191
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGEKR+S+FLLWQ+AY+E F WPDF A+ Y R+RRFG S++
Sbjct: 192 TGGEKRISNFLLWQLAYTELYFTDTLWPDFDARALDLAIQSYQQRERRFGRTSEQ 246
>gi|329912032|ref|ZP_08275643.1| Undecaprenyl pyrophosphate synthetase [Oxalobacteraceae bacterium
IMCC9480]
gi|327545755|gb|EGF30889.1| Undecaprenyl pyrophosphate synthetase [Oxalobacteraceae bacterium
IMCC9480]
Length = 237
Score = 194 bits (494), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 99/232 (42%), Positives = 136/232 (58%), Gaps = 4/232 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR GH KG++ V A A G++ LT+FAFS NWRR
Sbjct: 2 PRHIAIIMDGNGRWATKRFLPRVTGHVKGVDAVRGTVEACARSGVEFLTLFAFSSENWRR 61
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L + L + + N I+++V+G DD + ++ AE +T NTGL
Sbjct: 62 PADEVSLLMRLFVTALDREVAKMHANGIRLKVVGELSRFDDKLRRMISNAERRTAGNTGL 121
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ I NY R +I +A+ + + G D +A +L + P+PDL IRTGG
Sbjct: 122 TVTICANYGGRWDIMQAMNQLVAQ-QPGRA---DFTEDDLAPFLSMAYAPEPDLFIRTGG 177
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FLLWQ+AYSE F YWPDF A+ Y R+RRFG S++
Sbjct: 178 EERVSNFLLWQLAYSEMYFTDTYWPDFDAAQIQLAITSYQQRERRFGRTSEQ 229
>gi|54296535|ref|YP_122904.1| undecaprenyl pyrophosphate synthase [Legionella pneumophila str.
Paris]
gi|73920264|sp|Q5X7N9|UPPS_LEGPA RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|53750320|emb|CAH11714.1| Undecaprenyl pyrophosphate synthetase [Legionella pneumophila str.
Paris]
Length = 238
Score = 194 bits (494), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 93/236 (39%), Positives = 143/236 (60%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M+ P HI ++MDGNGRWA +RGLPR GH+ G++ +I+ E I L++FAFS
Sbjct: 1 MNHKLPQHIAVVMDGNGRWAESRGLPRVEGHKAGLDSVKKIINCCLEKKISCLSLFAFSS 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RPV+E++ L++L L+K L ++ I+++ G+R L + + +AE TR
Sbjct: 61 ENWSRPVTEVNFLMELFLEALRKEIDDLNQHGIRLKFTGDREPLSQVLQKQMYDAEALTR 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N L L + NY + +I A K + + G + +++ ++ A++LDTS +P+PDL
Sbjct: 121 NNQQLILNVVVNYGGKWDIVTAAKKLIHSVLDGKLACDEINEAVFAQFLDTSGMPEPDLF 180
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
IRT GE R+S+F LWQ+AY+E F +WPDF+ F AL + R RRFG +S+
Sbjct: 181 IRTSGELRISNFFLWQLAYTELYFTDVHWPDFNEHEFELALTSFARRARRFGQISQ 236
>gi|269217143|ref|ZP_06160997.1| di-trans,poly-cis-decaprenylcistransferase [Slackia exigua ATCC
700122]
gi|269129280|gb|EEZ60365.1| di-trans,poly-cis-decaprenylcistransferase [Slackia exigua ATCC
700122]
Length = 259
Score = 194 bits (493), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 100/231 (43%), Positives = 134/231 (58%), Gaps = 2/231 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI +IMDGNGRWA R L R GH+ GIE E + A++ G++ LT++AFS NW+R
Sbjct: 28 PEHIAVIMDGNGRWAKKRALNRLRGHKAGIEAVRETIRCASDAGVRYLTVYAFSTENWKR 87
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L + L + N++VR IG+ L +D A DQT NTG+
Sbjct: 88 PDDEVVGLMNLFAKTMLAEVDGLDEENVRVRTIGDLSLLPEDTRAAFGRAWDQTCGNTGM 147
Query: 131 NLFIAFNYSSRDEI--SRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
L +A NY SR+EI + +G + DV L + L T+ +PDPDL+IRT
Sbjct: 148 TLNVAVNYGSREEIMRAVRAVADAAVAAAGRGEARDVTPELFERGLYTAGIPDPDLVIRT 207
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE R+S+FLLWQVAY+EF WPDF R AL + RDRRFGG+
Sbjct: 208 SGEHRISNFLLWQVAYAEFYVTDVLWPDFDRYELLRALLDFQHRDRRFGGV 258
>gi|83749794|ref|ZP_00946768.1| Undecaprenyl pyrophosphate synthetase [Ralstonia solanacearum
UW551]
gi|207743240|ref|YP_002259632.1| undecaprenyl pyrophosphate synthetase (upp
synthetase)(di-trans,poly-cis-decaprenylcistransferase)
(undecaprenyl diphosphate synthase) (uds) protein
[Ralstonia solanacearum IPO1609]
gi|83723551|gb|EAP70755.1| Undecaprenyl pyrophosphate synthetase [Ralstonia solanacearum
UW551]
gi|206594637|emb|CAQ61564.1| undecaprenyl pyrophosphate synthetase (upp
synthetase)(di-trans,poly-cis-decaprenylcistransferase)
(undecaprenyl diphosphate synthase) (uds) protein
[Ralstonia solanacearum IPO1609]
Length = 259
Score = 194 bits (493), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 98/236 (41%), Positives = 144/236 (61%), Gaps = 2/236 (0%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
++ P H+ IIMDGNGRWA R LPR AGH +G++ +V AAA G++ LT+FAFS
Sbjct: 12 TADTPHHVAIIMDGNGRWATERHLPRMAGHSRGLDAVRAVVDAAANRGVRYLTLFAFSSE 71
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+S L+KL + L++ L ++ ++RV+G+ + + I +++EAE +T
Sbjct: 72 NWRRPTEEVSFLMKLFMTALRREVSKLHESGFRLRVVGDLSAFNPRIQLLIREAEAKTAA 131
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N+GL + IA NY R +I +A++ + D + + I+ YL + +PDL I
Sbjct: 132 NSGLTVTIAANYGGRWDILQAMRALVAD--QPDIAPEAITEEAISPYLALAYASEPDLFI 189
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE+R+S+F+LWQ+AYSE F YWPDF A Y R+RRFG S +
Sbjct: 190 RTGGEQRISNFMLWQLAYSELYFTERYWPDFDAAEMDRAFAWYRNRERRFGRTSAQ 245
>gi|34763575|ref|ZP_00144510.1| Undecaprenyl pyrophosphate synthetase [Fusobacterium nucleatum
subsp. vincentii ATCC 49256]
gi|27886764|gb|EAA23902.1| Undecaprenyl pyrophosphate synthetase [Fusobacterium nucleatum
subsp. vincentii ATCC 49256]
Length = 230
Score = 194 bits (493), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 97/235 (41%), Positives = 140/235 (59%), Gaps = 7/235 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M + P+HI IIMDGNGRWA RGL R GH +G + + + E+G+K LT++AFS
Sbjct: 1 MEKNIPNHIAIIMDGNGRWAKKRGLARSFGHMEGAKTLRKALEYLTEIGVKYLTVYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+S L+KL ++K ++ KN I+ V G + ++ + + +++ E++T+
Sbjct: 61 ENWNRPQDEVSTLMKLFLKYIKSERKNMMKNKIRFFVSGRKNNVPEKLQKEIEKLEEETK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N + L IAFNY SR EI A+ I +D ++ +KYL +D PDPDL+
Sbjct: 121 NNDKITLNIAFNYGSRAEIVDAVNRIIKD------RKENITEEDFSKYL-YNDFPDPDLV 173
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IRT GE R+S+FLLWQ+AYSE WPDF + A+ Y R+RRFGG+
Sbjct: 174 IRTSGEMRISNFLLWQIAYSELYITDTLWPDFDEKEIDKAIESYKQRERRFGGVK 228
>gi|325068604|ref|ZP_08127277.1| Undecaprenyl pyrophosphate synthetase [Actinomyces oris K20]
Length = 282
Score = 194 bits (493), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 95/238 (39%), Positives = 140/238 (58%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ ++S P H+ ++MDGNGRWA ARGLPR GHR G ++ A A E+G+K L+++AFS
Sbjct: 19 LPAASLPQHVAVVMDGNGRWANARGLPRTEGHRVGEANMLDVAAGAIEIGVKELSVYAFS 78
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRR E+ ++ + L+ L N+++R IG L +L L+EAE T
Sbjct: 79 TENWRRSPGEVRFIMGFARKVLRVQRDVLNSWNVRLRWIGRTPRLWKSVLHELREAERVT 138
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NTGL L + NY R EI+ A + I +D+ +G + + ++ I +YL + + D DL
Sbjct: 139 AHNTGLTLNLCINYGGRAEIADATRAIAEDVAAGRLKASSINEKTIQRYLYSPTMRDVDL 198
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTG E+R S+FL+W +Y+E F P WPDF+R + A Y R+RR+GG K
Sbjct: 199 FIRTGDEQRTSNFLMWSSSYAELYFSPLAWPDFNRTELWKACEAYAGRERRYGGAVDK 256
>gi|317056782|ref|YP_004105249.1| undecaprenyl diphosphate synthase [Ruminococcus albus 7]
gi|315449051|gb|ADU22615.1| undecaprenyl diphosphate synthase [Ruminococcus albus 7]
Length = 242
Score = 194 bits (493), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 90/230 (39%), Positives = 138/230 (60%), Gaps = 1/230 (0%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
PP H+G+IMDGNGRWA RGLPR GHR+G + F I A VGI +T +AFS NW+
Sbjct: 14 PPVHVGVIMDGNGRWAKKRGLPRKFGHREGAKNFRSITKHAKAVGIDYITFYAFSTENWK 73
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ ++ L + +L + + NI++R IG+R L + ++ E+ ++
Sbjct: 74 RPKDEVDAIMDLFEKYLDE-VEDFIEENIRIRFIGDRSQLKPSLQAKMRHTEETSKDFDA 132
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ L +A NY RDEI ++K + + ++ G + D+ +I + L T ++P DL+IR
Sbjct: 133 MTLVLAINYGGRDEICHSVKTLAEQVKRGELDPQDITEDMIERNLYTEEIPPLDLVIRPS 192
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE+RLS+F++WQ AY+EF + WPDF F A+ + R+RRFGG+
Sbjct: 193 GEQRLSNFMIWQAAYAEFYYTNILWPDFKNADFDRAILDFCERNRRFGGI 242
>gi|213158372|ref|YP_002319670.1| undecaprenyl diphosphate synthase [Acinetobacter baumannii AB0057]
gi|215483170|ref|YP_002325377.1| di-trans,poly-cis-decaprenylcistransferase [Acinetobacter baumannii
AB307-0294]
gi|301346281|ref|ZP_07227022.1| undecaprenyl pyrophosphate synthetase [Acinetobacter baumannii
AB056]
gi|301512092|ref|ZP_07237329.1| undecaprenyl pyrophosphate synthetase [Acinetobacter baumannii
AB058]
gi|301595692|ref|ZP_07240700.1| undecaprenyl pyrophosphate synthetase [Acinetobacter baumannii
AB059]
gi|332852501|ref|ZP_08434240.1| di-trans,poly-cis-decaprenylcistransferase [Acinetobacter baumannii
6013150]
gi|332871295|ref|ZP_08439844.1| di-trans,poly-cis-decaprenylcistransferase [Acinetobacter baumannii
6013113]
gi|213057532|gb|ACJ42434.1| undecaprenyl diphosphate synthase [Acinetobacter baumannii AB0057]
gi|213986726|gb|ACJ57025.1| di-trans,poly-cis-decaprenylcistransferase [Acinetobacter baumannii
AB307-0294]
gi|332729203|gb|EGJ60546.1| di-trans,poly-cis-decaprenylcistransferase [Acinetobacter baumannii
6013150]
gi|332731579|gb|EGJ62865.1| di-trans,poly-cis-decaprenylcistransferase [Acinetobacter baumannii
6013113]
Length = 250
Score = 194 bits (493), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 144/232 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGN R+A + + GHR+G V + IV + G++ LT+FAFS NW R
Sbjct: 10 PQHVAIIMDGNNRFAKKNQMQKGDGHREGKNVLDPIVEHCVKTGVRALTVFAFSSENWNR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL++ + + +KK NI +R IG+R L ++ ++++AE QT + +
Sbjct: 70 PQYEVDLLMKLLEETIHEQIPRMKKFNIALRFIGDRSRLPSHLVALMEDAEQQTAHHEAM 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA +Y +I+ A K + Q + G + + ++ L AKY+ +D+P DL+IRTGG
Sbjct: 130 TLTIAVSYGGMWDIANAAKQVAQAVSRGEIDADQINVDLFAKYVSLNDLPAVDLLIRTGG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+ R+S+FLLWQ AY+E F WP+F+ E F HALN ++ R+RRFG S++
Sbjct: 190 DFRISNFLLWQAAYAELYFTDTLWPEFTVEEFDHALNVFSGRERRFGKTSEQ 241
>gi|320535433|ref|ZP_08035542.1| di-trans,poly-cis-decaprenylcistransferase [Treponema phagedenis
F0421]
gi|320147720|gb|EFW39227.1| di-trans,poly-cis-decaprenylcistransferase [Treponema phagedenis
F0421]
Length = 226
Score = 194 bits (493), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 99/229 (43%), Positives = 139/229 (60%), Gaps = 7/229 (3%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+HI IIMDGNGRWA RGL R GH++G E +IV A + + I +T++AFS NW+R
Sbjct: 5 EHIAIIMDGNGRWAQQRGLSRSRGHQEGYETAKKIVKAVSALKIPYITLYAFSTENWKRT 64
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E+ L+ LIK L+ F +NNI++ IGN +L DI + + ++T+ + G
Sbjct: 65 TEEVGFLMGLIKKHLRAEFQFYVENNIRMIHIGNLSALPKDIQKEISDVTEKTKHHAGTA 124
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+ A NY +DEI RA++ I D + + S ++YLD +PD DL+IRTGGE
Sbjct: 125 VVFAINYGGKDEIIRALQKIPAD------KINSITESSFSEYLDYP-LPDVDLLIRTGGE 177
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
KR+S+FLLWQ AY+E F WPDF+ + AL Y RDRRFGG++
Sbjct: 178 KRISNFLLWQTAYAELYFTDTLWPDFTEDDLHQALQSYKHRDRRFGGIT 226
>gi|315655180|ref|ZP_07908081.1| di-trans,poly-cis-decaprenylcistransferase [Mobiluncus curtisii
ATCC 51333]
gi|315490435|gb|EFU80059.1| di-trans,poly-cis-decaprenylcistransferase [Mobiluncus curtisii
ATCC 51333]
Length = 260
Score = 194 bits (493), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 132/226 (58%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA A+GL R AGH G + +A A + G+K L+++AFS NW+R
Sbjct: 29 HVAIIMDGNGRWANAQGLNRTAGHEAGEYALMDTIAGAVDAGVKFLSVYAFSTENWKRSP 88
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+E+ L+ + L+ L ++VR G L +L L+ AED TR NTG L
Sbjct: 89 AEVKFLMGYSRRVLRSRRDELNAWGVRVRWSGREGRLWKSVLTELRAAEDLTRGNTGTQL 148
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+ NY R EI+ A + + Q + +G++ + + A+ L DVPD DL+IRT GE+
Sbjct: 149 IMCLNYGGRAEIADAARKLAQRVAAGTLNPERITETTFARELYLPDVPDVDLLIRTSGEQ 208
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R S+FL WQ AY+E VF PE WP++ R + L Y RDRRFGG
Sbjct: 209 RTSNFLPWQAAYAELVFAPEPWPEYGRAALWRDLLAYQHRDRRFGG 254
>gi|256375394|ref|YP_003099054.1| undecaprenyl diphosphate synthase [Actinosynnema mirum DSM 43827]
gi|255919697|gb|ACU35208.1| undecaprenyl diphosphate synthase [Actinosynnema mirum DSM 43827]
Length = 288
Score = 194 bits (493), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 96/228 (42%), Positives = 134/228 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI I+MDGNGRWA RGL R GH++G E A E+G+K L+++AFS NWRR
Sbjct: 35 PKHIAIVMDGNGRWANQRGLSRVEGHKRGEANVVEAAKGAIEMGVKWLSLYAFSTENWRR 94
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + + + L + ++VR G R L ++ L+ A+++T+ NT L
Sbjct: 95 SPEEVRFLMGFSRDVIHRRTDELDELGVRVRWAGRRPRLWRSVVTELESAQERTKHNTTL 154
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL + NY R E+ A + I + +G + VD IA+YL ++PD DL IR G
Sbjct: 155 NLAMCINYGGRAEVGDAAREIARLAAAGKINPDKVDERTIARYLYQPEMPDVDLFIRPSG 214
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S+F+LWQ AY+E VF WPDF RE + A QY +RDRRFGG
Sbjct: 215 EQRTSNFMLWQSAYAELVFQDILWPDFGREDLWRACEQYAMRDRRFGG 262
>gi|329946921|ref|ZP_08294333.1| di-trans,poly-cis-decaprenylcistransferase [Actinomyces sp. oral
taxon 170 str. F0386]
gi|328526732|gb|EGF53745.1| di-trans,poly-cis-decaprenylcistransferase [Actinomyces sp. oral
taxon 170 str. F0386]
Length = 296
Score = 194 bits (493), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 97/238 (40%), Positives = 140/238 (58%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ S+S P H+ ++MDGNGRWA ARGLPR GHR G ++VA A E+G+ L+ +AFS
Sbjct: 36 LPSASLPQHVAVVMDGNGRWANARGLPRTEGHRVGEANLLDVVAGAVEIGVSELSAYAFS 95
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRR E+ ++ + L+ L N+KVR +G L +L L+EAE T
Sbjct: 96 TENWRRSPGEVRFIMGFARKVLRAQRDILHSWNVKVRWVGRTPRLWRSVLRELREAERLT 155
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NTGL L + NY R EI+ A + I +D+ +G + + ++ +I +YL + + D DL
Sbjct: 156 AHNTGLVLNLCINYGGRAEIADATRAIAEDVAAGRLKASSINEKIIQRYLYSPTMRDVDL 215
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTG E+R S+FL+W +Y+E F P WPDF+R + A Y R+RR+GG K
Sbjct: 216 FIRTGDEQRTSNFLMWSSSYAELYFSPLAWPDFNRTELWRACEVYAGRERRYGGAVDK 273
>gi|207723358|ref|YP_002253757.1| undecaprenyl pyrophosphate synthetase (upp
synthetase)(di-trans,poly-cis-decaprenylcistransferase)
(undecaprenyl diphosphate synthase) (uds) protein
[Ralstonia solanacearum MolK2]
gi|206588557|emb|CAQ35520.1| undecaprenyl pyrophosphate synthetase (upp
synthetase)(di-trans,poly-cis-decaprenylcistransferase)
(undecaprenyl diphosphate synthase) (uds) protein
[Ralstonia solanacearum MolK2]
Length = 259
Score = 194 bits (493), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 98/236 (41%), Positives = 144/236 (61%), Gaps = 2/236 (0%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
++ P H+ IIMDGNGRWA R LPR AGH +G++ +V AAA G++ LT+FAFS
Sbjct: 12 TADTPHHVAIIMDGNGRWATERHLPRMAGHSRGLDAVRAVVDAAANRGVRYLTLFAFSSE 71
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+S L+KL + L++ L ++ ++RV+G+ + + I +++EAE +T
Sbjct: 72 NWRRPAEEVSFLMKLFMTALRREVSKLHESGFRLRVVGDLSAFNPRIQLLIREAEAKTAA 131
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N+GL + IA NY R +I +A++ + D + + I+ YL + +PDL I
Sbjct: 132 NSGLTVTIAANYGGRWDILQAMRALVAD--QPDIAPEAITEEAISPYLALAYASEPDLFI 189
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE+R+S+F+LWQ+AYSE F YWPDF A Y R+RRFG S +
Sbjct: 190 RTGGEQRISNFMLWQLAYSELYFTERYWPDFDAAEMDRAFAWYRNRERRFGRTSAQ 245
>gi|120599548|ref|YP_964122.1| undecaprenyl diphosphate synthase [Shewanella sp. W3-18-1]
gi|146292455|ref|YP_001182879.1| undecaprenyl diphosphate synthase [Shewanella putrefaciens CN-32]
gi|120559641|gb|ABM25568.1| Undecaprenyl pyrophosphate synthetase [Shewanella sp. W3-18-1]
gi|145564145|gb|ABP75080.1| Undecaprenyl pyrophosphate synthetase [Shewanella putrefaciens
CN-32]
gi|319425757|gb|ADV53831.1| undecaprenyl diphosphate synthase [Shewanella putrefaciens 200]
Length = 275
Score = 194 bits (493), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 143/233 (61%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
++ S P H+ IIMDGNGRWA +G PR GH+ G++ V+ A+++GI++LT+FAFS
Sbjct: 31 LVKQSLPKHVAIIMDGNGRWAQTQGKPRVMGHKAGVKAVRRAVSTASQLGIQSLTLFAFS 90
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRRP E+S L++L + L++ L KN +K+ +IG+ + + A+++T
Sbjct: 91 SENWRRPDKEVSLLMELFFTVLQREIKLLHKNQVKLNIIGDISRFSVRLQKQISAAQEKT 150
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NTGL L +A NY R +I +A + + + + +G + S ++ +L + + DL
Sbjct: 151 AANTGLILNVAANYGGRWDILQAAQKLAEKVATGEMTSSQFTEEALSAHLCMQNQSEVDL 210
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+IRTGG+ R+S+F+LWQ AY+E VFI WPDF + F A+ + R RRFG
Sbjct: 211 MIRTGGDCRISNFVLWQAAYAELVFIDTLWPDFDEQAFHEAIAIFASRQRRFG 263
>gi|88798261|ref|ZP_01113847.1| undecaprenyl diphosphate synthase [Reinekea sp. MED297]
gi|88779037|gb|EAR10226.1| undecaprenyl diphosphate synthase [Reinekea sp. MED297]
Length = 234
Score = 194 bits (493), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 92/224 (41%), Positives = 139/224 (62%)
Query: 14 IGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVS 73
+ IIMDGN RWA R L AGH+ + +V +A G++ LT++AFS NWRRP
Sbjct: 1 MAIIMDGNNRWAKKRLLGGIAGHKAAVSTVRMVVEESARAGVEVLTLYAFSSENWRRPQD 60
Query: 74 EISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLF 133
E++ L+ L L + L +NN+++ VIG++ I + +AE T NTG+ L
Sbjct: 61 EVNALMDLFLMALNREVKKLVRNNLRLVVIGDKSGFSPSIQKAIAKAEADTASNTGMVLA 120
Query: 134 IAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKR 193
IA NY +I++A++ + +E+G + + D+D + I+ + + +P PDL IRT GE+R
Sbjct: 121 IAANYGGHWDIAQAVRKLAHRVEAGELKAEDIDENAISNEVMLAGLPVPDLCIRTAGEQR 180
Query: 194 LSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+S+FLLWQ+AY+EF F PE+WPDF+RE + A Y+ R RRFG
Sbjct: 181 ISNFLLWQMAYTEFYFTPEFWPDFNRESLYEAFASYSSRVRRFG 224
>gi|332670836|ref|YP_004453844.1| undecaprenyl diphosphate synthase [Cellulomonas fimi ATCC 484]
gi|332339874|gb|AEE46457.1| undecaprenyl diphosphate synthase [Cellulomonas fimi ATCC 484]
Length = 300
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/228 (40%), Positives = 137/228 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ ++MDGNGRWA ARGLPR GHR G ++VA A E+G+++++ +AFS NW R
Sbjct: 62 PRHVAVVMDGNGRWANARGLPRTEGHRAGEASLLDVVAGAIEIGVEHVSAYAFSTENWSR 121
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + L++ + ++VR G R L ++ L+EAE T+ NT
Sbjct: 122 SPDEVRFLMGFNRDVLRRRRDLMHSWGVRVRWAGRRPRLWRSVIAELEEAERLTKDNTTC 181
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R EI+ A + I +++ +G + V+ A+YLD D+PD DL +R+ G
Sbjct: 182 TLTMCVNYGGRAEIADAAQAIAREVAAGRLKPERVNEKTFARYLDEPDMPDVDLFLRSSG 241
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S+FLLWQ AY+E VF+ E WPD R + A+ Y RDRR+GG
Sbjct: 242 EQRTSNFLLWQAAYAELVFLDEPWPDVDRRHLWRAVETYARRDRRYGG 289
>gi|302339358|ref|YP_003804564.1| undecaprenyl diphosphate synthase [Spirochaeta smaragdinae DSM
11293]
gi|301636543|gb|ADK81970.1| undecaprenyl diphosphate synthase [Spirochaeta smaragdinae DSM
11293]
Length = 238
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/230 (41%), Positives = 138/230 (60%), Gaps = 1/230 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA RG PR GH+ G + +++ +A E+GI+ LT++ FS NW+R
Sbjct: 8 PKHIGIIMDGNGRWAERRGKPRSFGHKSGTDTAKKVITSAIEMGIEWLTLYVFSTENWKR 67
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++LI+ ++K KN I++ +G+ L ++I + EA + T L
Sbjct: 68 PEREVRFLMELIRRYMKSEAPFYHKNKIRLHHLGDPERLPEEIRREIVEASEATSHYDRL 127
Query: 131 NLFIAFNYSSRDEISRAIKN-IFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+L +A NY RDEI R+ + + +E G S S + YLD + P PDLIIRT
Sbjct: 128 HLALAINYGGRDEILRSFQRWVTATLEKGETISSAPTSEEFSTYLDLPEAPSPDLIIRTA 187
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE+R+S+FLLW+ AYSE+ F WPDF E A+ Y R R++GG+
Sbjct: 188 GEQRMSNFLLWESAYSEYYFSEVLWPDFDGEELSKAIEFYRGRKRKYGGV 237
>gi|224540948|ref|ZP_03681487.1| hypothetical protein CATMIT_00099 [Catenibacterium mitsuokai DSM
15897]
gi|224526099|gb|EEF95204.1| hypothetical protein CATMIT_00099 [Catenibacterium mitsuokai DSM
15897]
Length = 247
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/231 (40%), Positives = 136/231 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IMDGNGRWA R +PR GH +G + + A +G+K +T++AFS N++R
Sbjct: 17 PAHIAFIMDGNGRWAKKRKMPRTYGHHEGTKTIRNLALEANNLGVKAMTVYAFSTENFKR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
SE+ + KL K F F L NN+++ IG+ + ++ +A +T+ NTGL
Sbjct: 77 EQSEVDYIFKLPKEFFSLYFQELMDNNVRIMTIGHLELAPKETQDIINDAITKTKDNTGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L AF Y RDEI A K I ++ + G V ++ +L T ++P DL+IR+ G
Sbjct: 137 KLVFAFIYGGRDEIVEATKAICEEYKEGKVSLDNITEDYFESHLMTKELPPVDLMIRSSG 196
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E RLS+FLLWQ++Y+EF+F YWPDF+ E + +Y RDRR+GG+ K
Sbjct: 197 ECRLSNFLLWQLSYAEFIFDEAYWPDFNAEKLHECIWKYQNRDRRYGGVKK 247
>gi|119386702|ref|YP_917757.1| undecaprenyl diphosphate synthase [Paracoccus denitrificans PD1222]
gi|119377297|gb|ABL72061.1| Undecaprenyl pyrophosphate synthetase [Paracoccus denitrificans
PD1222]
Length = 244
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/228 (42%), Positives = 137/228 (60%), Gaps = 2/228 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG PR GHR+G E +IV A ++G+ LT++AFS NW+R
Sbjct: 18 PRHVAIIMDGNGRWAKNRGWPRLVGHRRGAERVKQIVRACPDLGVNWLTVYAFSTENWKR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + ++++ L +++R IG R L+ + ++ E +T NT L
Sbjct: 78 STEEVLGLMGIFARYIEREADGLSAEGVRMRFIGGRERLEPKLQRLMAGIEARTAGNTRL 137
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL +A NY RDE++RA + I G V + + +A LDT+ PDPDL+IRT G
Sbjct: 138 NLTVAINYGGRDELTRAAARLAARIGRGEVA--EPTEADLADCLDTAGHPDPDLVIRTSG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E R S+FL +Q AYSE+ F WPDF+ E L++Y LRDRRFGG
Sbjct: 196 ETRTSNFLPFQAAYSEYEFTQTLWPDFTPEHLAEILDRYGLRDRRFGG 243
>gi|315656964|ref|ZP_07909849.1| undecaprenyl diphosphate synthase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|315492356|gb|EFU81962.1| undecaprenyl diphosphate synthase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 260
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/237 (40%), Positives = 135/237 (56%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ S +S H+ IIMDGNGRWA A+GL R AGH G + +A A E G+K L+++
Sbjct: 18 LPSGLSRGAVSHVAIIMDGNGRWANAQGLNRTAGHEAGEYALMDTIAGAVEAGVKFLSVY 77
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+R +E+ L+ + L+ L ++VR G L +L L+ AE
Sbjct: 78 AFSTENWKRSPAEVKFLMGYSRRVLRDRRDELNAWGVRVRWSGREGRLWKSVLTELRRAE 137
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
TR NTG L + NY R E++ A + + Q + +G++ + + A+ L DVPD
Sbjct: 138 TLTRGNTGTQLIMCLNYGGRAELADAARKLAQRVAAGTLNPERITETTFARELYLPDVPD 197
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DL+IRT GE+R S+FL WQ AY+E VF PE WP++ R + L Y RDRRFGG
Sbjct: 198 VDLLIRTSGEQRTSNFLPWQAAYAELVFAPEPWPEYGRAALWRDLLAYQHRDRRFGG 254
>gi|212710392|ref|ZP_03318520.1| hypothetical protein PROVALCAL_01452 [Providencia alcalifaciens DSM
30120]
gi|212686974|gb|EEB46502.1| hypothetical protein PROVALCAL_01452 [Providencia alcalifaciens DSM
30120]
Length = 250
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/235 (41%), Positives = 142/235 (60%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ S P H+ IIMDGNGRWA RG R GHR G+E V A + I++LT++AF
Sbjct: 7 NLSDSMMPKHVAIIMDGNGRWAKQRGKFRITGHRAGVESVRSSVRFAVKNNIRSLTLYAF 66
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP E+S L+ L L +L KNN+K+++IG+ + + + +AE
Sbjct: 67 SSENWKRPEKEVSSLMDLFVFALDNEVKNLHKNNVKLKIIGDVGRFSETLRKRIDKAEAL 126
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NTGL L IA NY R +I ++K +++ + G + D+ S I+ ++ D D
Sbjct: 127 TANNTGLQLNIAANYGGRWDIVNSVKQVYEKVNRGELSVDDITESTISDHICMHDQECVD 186
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L+IRTGGE R+S+FLLWQVAY+EF F WPDF +F A++ ++ R+RR+GG
Sbjct: 187 LVIRTGGEHRISNFLLWQVAYAEFYFTNVLWPDFDEMVFQDAVDAFSKRERRYGG 241
>gi|157376289|ref|YP_001474889.1| di-trans, poly-cis-decaprenylcistransferase [Shewanella sediminis
HAW-EB3]
gi|157318663|gb|ABV37761.1| Di-trans, poly-cis-decaprenylcistransferase [Shewanella sediminis
HAW-EB3]
Length = 264
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/236 (39%), Positives = 143/236 (60%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
VA ++ S P H+ IIMDGNGRWA A+G PR GHR G++ +V+ A E+GI +LT+F
Sbjct: 16 VAELVKLSTPKHVAIIMDGNGRWAQAQGKPRVMGHRAGVKAVRRVVSTAREMGIDSLTLF 75
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP E++ L++L + L++ L KN +++ +IG+ + + + AE
Sbjct: 76 AFSSENWRRPDKEVTLLMELFFTVLQREIKLLHKNGVRLNIIGDISRFPERLQKQIASAE 135
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T N+ L L +A NY R +I +A + + + +ESG + S + ++L + P+
Sbjct: 136 AKTADNSELILNVAANYGGRWDIMQAAQTLAKKVESGEMNSSQFTEEALNEHLCMQNQPE 195
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRTGG+ R+S+F+LWQ AY+E VF WPDF F + + R RRFG
Sbjct: 196 VDLMIRTGGDFRISNFILWQAAYAELVFTDTLWPDFDENAFRQTVAIFASRQRRFG 251
>gi|58040245|ref|YP_192209.1| undecaprenyl pyrophosphate synthetase [Gluconobacter oxydans 621H]
gi|58002659|gb|AAW61553.1| Undecaprenyl pyrophosphate synthetase [Gluconobacter oxydans 621H]
Length = 235
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/228 (42%), Positives = 139/228 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA AR LP AGHR+G E + V A G++ LT++AFS NWRR
Sbjct: 5 PVHIAMIMDGNGRWARARKLPVAAGHRQGAESVQQCVRTAIRQGVRYLTLYAFSSENWRR 64
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ +L L++ +L+ L +++R+IG + + L+ AE T NT L
Sbjct: 65 SAEEVGDLTSLLRFYLRHKINELHAQGVRLRIIGEPERFEGSLREELRRAEALTLHNTTL 124
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y R +I +A + + +D +G + + + +++ L TSD+PDPDL+IRT G
Sbjct: 125 TLTLALSYGGRADIVQAARRLAEDAVAGKIAAESISEAMLDDALQTSDMPDPDLVIRTSG 184
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E RLS+FLLWQ AY+E VF+ WPDF F AL+++ R RRFGG
Sbjct: 185 ECRLSNFLLWQSAYAELVFMDVLWPDFGEVEFLEALSRFASRQRRFGG 232
>gi|228473522|ref|ZP_04058275.1| undecaprenyl pyrophosphate synthetase 1 [Capnocytophaga gingivalis
ATCC 33624]
gi|228275129|gb|EEK13932.1| undecaprenyl pyrophosphate synthetase 1 [Capnocytophaga gingivalis
ATCC 33624]
Length = 242
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 138/232 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG R GH KG + EI+ ++GI LT++ FS NW+R
Sbjct: 9 PRHLAIIMDGNGRWAKQRGKQRILGHEKGAKTVREIIQEVTQLGIPYLTLYTFSTENWKR 68
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L+ +LKK +++NN+++ IG+ SL I L +A + T+ NT
Sbjct: 69 PKLEVEALMHLLSRYLKKEVEIMQQNNVRLNAIGDLESLPSKIQKELHKAMEATKGNTKT 128
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ +A Y + EI + +++I + ++ G + ++ + + L T ++P DL+IRT G
Sbjct: 129 VVSLALGYGGQQEILQMVQHIARKVQQGELSLDEITAERVQAALYTKEIPPVDLLIRTSG 188
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AY+E F WPDFS E AL Y R+RRFG S++
Sbjct: 189 ECRISNFLLWQIAYAELYFTDVLWPDFSSEELHKALFNYQNRERRFGKTSEQ 240
>gi|217967586|ref|YP_002353092.1| undecaprenyl diphosphate synthase [Dictyoglomus turgidum DSM 6724]
gi|217336685|gb|ACK42478.1| undecaprenyl diphosphate synthase [Dictyoglomus turgidum DSM 6724]
Length = 244
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 100/230 (43%), Positives = 136/230 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IMDGNGRWA R LPR GHR+G V +I A GI LT FAFS NWRR
Sbjct: 12 PKHIAFIMDGNGRWAKERNLPRLIGHREGALVVEKISEIAFNWGINYLTFFAFSTENWRR 71
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L+ + K L KN I+++VIGN L + + ++T+
Sbjct: 72 PREEVEGLMQLLDESIDKFKDKLVKNKIRLKVIGNLDELPTYLQRRINYVVEETKNGKDK 131
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY R +I A+K I ++ ++ DV+ +L + +L T D+P+PDL+IRT G
Sbjct: 132 VLTVALNYGGRWDILEAVKKIALQVKENNLKIEDVNENLFSSFLSTYDLPEPDLLIRTSG 191
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E R+S+FLLWQ+AY+E F P+YWPDF+ E A + R RRFGGL
Sbjct: 192 EYRISNFLLWQIAYTELWFTPKYWPDFNEEDLRMACLDFAKRKRRFGGLE 241
>gi|227432327|ref|ZP_03914320.1| Di-trans,poly-cis-decaprenylcistransferase [Leuconostoc
mesenteroides subsp. cremoris ATCC 19254]
gi|227351933|gb|EEJ42166.1| Di-trans,poly-cis-decaprenylcistransferase [Leuconostoc
mesenteroides subsp. cremoris ATCC 19254]
Length = 259
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 99/235 (42%), Positives = 140/235 (59%), Gaps = 3/235 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R +PR AGH+ G+ I +AA+++G+K LT++ FS NW R
Sbjct: 20 PEHIAIIMDGNGRWAKKRLIPRAAGHKAGMNTVKRIASAASDMGVKVLTLYVFSTENWSR 79
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L++L +F L KNNI+V V GN +L + A ++T TG+
Sbjct: 80 PNDEVNFLMQLPIAFFNDFVPDLIKNNIRVSVTGNVDALPAATQDAVNGAIEETANGTGM 139
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS---DVPDPDLIIR 187
L A NY + EI A K I +++ G + D++S + A L T+ D+ PDL+IR
Sbjct: 140 VLNFAMNYGGQVEIVDATKKIAEEVAKGHLSPDDINSEVFAAALQTAHLGDLATPDLMIR 199
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
T GE RLS+FL +Q AY+E F WPD+S + A+ Y RDRRFGGL+ +
Sbjct: 200 TSGELRLSNFLPYQAAYAELYFTDVLWPDYSSDDLMTAIQSYTKRDRRFGGLNDE 254
>gi|217970576|ref|YP_002355810.1| undecaprenyl diphosphate synthase [Thauera sp. MZ1T]
gi|217507903|gb|ACK54914.1| undecaprenyl diphosphate synthase [Thauera sp. MZ1T]
Length = 255
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/235 (43%), Positives = 137/235 (58%), Gaps = 3/235 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P HI +IMDGNGRWA R LPR AGH +G+E V + G++ LT+FAFS N
Sbjct: 17 SQVPKHIAVIMDGNGRWARKRMLPRVAGHARGVEALRATVRGCVDRGVEYLTVFAFSSEN 76
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+S L++L L+K + N+++ RVIG+ D ++ +++EAE T N
Sbjct: 77 WRRPQDEVSFLMQLFLKSLQKEIRRMHDNDMRFRVIGDLSKFDPRLVDMIREAETLTAGN 136
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
GLN +A NY R +I A+ + E G + D IA L S P+PDL IR
Sbjct: 137 GGLNFTVAANYGGRWDILDAMSRLMAR-EPGRLERFTEDE--IASELSMSFAPEPDLFIR 193
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGEKR+S+FLLWQ+AY+E F WPDF A+ Y R+RRFG S++
Sbjct: 194 TGGEKRISNFLLWQLAYTELYFTDVLWPDFDDGALGQAIGSYQGRERRFGRTSEQ 248
>gi|254166833|ref|ZP_04873687.1| undecaprenyl diphosphate synthase [Aciduliprofundum boonei T469]
gi|289596094|ref|YP_003482790.1| undecaprenyl diphosphate synthase [Aciduliprofundum boonei T469]
gi|197624443|gb|EDY37004.1| undecaprenyl diphosphate synthase [Aciduliprofundum boonei T469]
gi|289533881|gb|ADD08228.1| undecaprenyl diphosphate synthase [Aciduliprofundum boonei T469]
Length = 258
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/229 (42%), Positives = 141/229 (61%), Gaps = 2/229 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+GIIMDGN R+A + GHR+G + E++ E+GIK LT++AFS N++R
Sbjct: 29 PKHVGIIMDGNRRFARELDMKPTQGHREGKDKLEEVIEWCREIGIKILTVYAFSTENFKR 88
Query: 71 PVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
E+ EL++L LKK + KN I+++VIG R L +++ ++ AE++T+
Sbjct: 89 SREEVLELMRLFIENLKKAADDERVHKNKIRIKVIGQREVLPEELREAIEYAEERTKNYD 148
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
IA Y R+EI +AIK I Q+++ G + D+ + K+L T D+PDPDLI+RT
Sbjct: 149 EFFFNIAIAYGGREEIIKAIKEIAQEVKDGKLEVEDITEETVRKHLYTGDLPDPDLILRT 208
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
GE+R+S+FLLWQ AYSEF F YWP F + F A+ Y +R RRFG
Sbjct: 209 SGEERISNFLLWQSAYSEFYFADIYWPTFRKIDFLRAIRSYQMRQRRFG 257
>gi|182413740|ref|YP_001818806.1| undecaprenyl diphosphate synthase [Opitutus terrae PB90-1]
gi|177840954|gb|ACB75206.1| undecaprenyl diphosphate synthase [Opitutus terrae PB90-1]
Length = 234
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/220 (41%), Positives = 137/220 (62%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA RGLPR GHR+G+E + AA ++G++ LT++AFS+ NW+RP E+
Sbjct: 1 MDGNGRWAKQRGLPRIEGHRRGVETVRTVTFAARDLGVRMLTLYAFSVENWKRPQDEVGA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ L++ +LKK + ++ +++R IG L + +L+ A ++TR T L +A N
Sbjct: 61 LMGLLEFYLKKELETFVRDRVRLRTIGRTQDLPAGVQKLLRTAIEETRHFTDYTLVLALN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y +R E A + + +G+ +D ++YL T+ +PDPDLIIRT GE R+S+F
Sbjct: 121 YGARTEAVDAARAYAAAVAAGTEKLNDDSWETFSRYLYTTGLPDPDLIIRTSGETRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
LL Q AY+EFVF P WPDF + A+ +Y R+RRFG
Sbjct: 181 LLLQAAYAEFVFTPVLWPDFGKPELAAAIAEYARRERRFG 220
>gi|90408930|ref|ZP_01217065.1| undecaprenyl pyrophosphate synthetase [Psychromonas sp. CNPT3]
gi|90309958|gb|EAS38108.1| undecaprenyl pyrophosphate synthetase [Psychromonas sp. CNPT3]
Length = 247
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/236 (39%), Positives = 140/236 (59%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ P H+ IIMDGNGRWA RG R GH+ G++ + + A E I LT+FAFS
Sbjct: 7 QTKTPQHVAIIMDGNGRWAEKRGKHRVFGHKHGVKALRKAITFATENKIGALTVFAFSSE 66
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW+RP E+ L++L S L L K+ IK+++IG + + EAE T
Sbjct: 67 NWQRPKQEVKMLMELFFSVLGSEVKKLHKHGIKLKIIGELTGFSSRLQKKVLEAEKLTEN 126
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N GL L +A NY R +I++A + + + +E+G++ + VD +++ L S +P DL+I
Sbjct: 127 NQGLILNVAANYGGRWDITQATRTLLERVENGTLKASQVDETMMQDALTLSKIPQVDLMI 186
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE R+S+FLLWQ+AY+E F WPDF F AL+ ++ ++RRFG S++
Sbjct: 187 RTGGEHRISNFLLWQLAYAELYFTDTLWPDFDASDFQFALDVFSGKERRFGQTSEQ 242
>gi|163840336|ref|YP_001624741.1| undecaprenyl pyrophosphate synthetase [Renibacterium salmoninarum
ATCC 33209]
gi|162953812|gb|ABY23327.1| undecaprenyl pyrophosphate synthetase [Renibacterium salmoninarum
ATCC 33209]
Length = 282
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 92/228 (40%), Positives = 138/228 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I+MDGNGRWA RGL R GH+ G ++VA A +GIK+LT+FAFS NWRR
Sbjct: 43 PAHVAIVMDGNGRWANQRGLTRIEGHKAGEPALLDVVAGAINLGIKHLTVFAFSTENWRR 102
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + L++ L +++R G R L ++ L+ A++QT+ N L
Sbjct: 103 SPDEVRFLMGFNRDVLRRQRDQLDAWGVRIRWSGRRPRLWASVVKELEVAQEQTKDNDTL 162
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY + EI A+ +I Q++ +G + + I K+L D+P+ DL +R+ G
Sbjct: 163 TLTMCVNYGGQAEIVDAVTSIAQEVAAGKLKPSGISEKTIQKHLYQPDLPEVDLFLRSSG 222
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R+S+F+LWQ AY+EFVF+ WPD R +HA++ Y RDRR+GG
Sbjct: 223 EQRISNFVLWQSAYAEFVFLDTLWPDVDRRTLWHAVDVYAQRDRRYGG 270
>gi|254361114|ref|ZP_04977259.1| di-trans,poly-cis-decaprenylcistransferase [Mannheimia haemolytica
PHL213]
gi|153092600|gb|EDN73655.1| di-trans,poly-cis-decaprenylcistransferase [Mannheimia haemolytica
PHL213]
Length = 230
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/228 (41%), Positives = 140/228 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R GH+ G++ V+ AA+ I+ LT++AFS NW R
Sbjct: 2 PKHVAIIMDGNGRWAKQKGKLRIFGHQNGVKAVRSAVSFAAKHHIQVLTLYAFSSENWSR 61
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+S L+ L L L KNNI++++IG++ + +++ + E+E T NTGL
Sbjct: 62 PETEVSALMSLFMKALDSEVKQLHKNNIRLKIIGDKSAFSENLQKRIAESEKLTENNTGL 121
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY +I +A + + ++S + + +L ++L T + P DL+IRT G
Sbjct: 122 ILNIAANYGGYWDIVQAAQQLAVHVKSEQLAVEQITPALFQQHLVTENQPQVDLLIRTSG 181
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R+S+FLLWQ+AY+E F P WPDF+ E F A+ Y R+RRFGG
Sbjct: 182 EQRISNFLLWQIAYAELFFSPVLWPDFNDEAFSDAIYAYQQRERRFGG 229
>gi|119946593|ref|YP_944273.1| undecaprenyl diphosphate synthase [Psychromonas ingrahamii 37]
gi|119865197|gb|ABM04674.1| Undecaprenyl pyrophosphate synthetase [Psychromonas ingrahamii 37]
Length = 259
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 91/225 (40%), Positives = 145/225 (64%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA ++G R GH+ G++ +A A+E ++ LT+FAFS NW+RPV
Sbjct: 28 HVAIIMDGNGRWAQSKGKHRVLGHKHGVQSLRRAIAFASEQKLEALTLFAFSSENWQRPV 87
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+ L+ L + L L+KNNIK++VIG + + + EAE++T+ NTGL +
Sbjct: 88 QEVDMLMALFFTVLSSEVKKLQKNNIKLKVIGELSGFSEGLQKKIIEAENRTQANTGLVV 147
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A NY R +I++A K + + +G + D++ L+ +++P DL+IRTGG++
Sbjct: 148 NVAANYGGRWDITQATKKLATLVAAGKLKVEDINEQLLNNVTCLAELPPVDLLIRTGGDQ 207
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
R+S+F+LWQ+AY+EF F WPDF + F +AL+ ++ ++RRFG
Sbjct: 208 RISNFILWQLAYAEFYFTDVLWPDFDGQEFQYALDVFSSKERRFG 252
>gi|282896305|ref|ZP_06304327.1| Di-trans-poly-cis-decaprenylcistransferase [Raphidiopsis brookii
D9]
gi|281198801|gb|EFA73680.1| Di-trans-poly-cis-decaprenylcistransferase [Raphidiopsis brookii
D9]
Length = 249
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/227 (38%), Positives = 134/227 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA +GLPR GH++G++ ++ + GI+ LT +AFS NW R
Sbjct: 21 PKHVAVIMDGNGRWAKGQGLPRIMGHKRGVDALKNLLRCCKDWGIQALTAYAFSTENWNR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L + L++ + + N++++ +GN +L + + + +TR N +
Sbjct: 81 PHEEVEFLMTLFQGVLRQELREMVEENVEIQFVGNLQALPVALQREISHSMAETRGNQSI 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY R EI +A + I Q ++ G + ++ L A +L T+ + DPDL+IRT G
Sbjct: 141 KFTVATNYGGRQEIVQACQAIAQKVKEGLLNPEEISEELFAGHLYTAGIADPDLLIRTSG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E RLS+FLLWQ+AY+E WPDF R F AL Y R+RRFG
Sbjct: 201 EMRLSNFLLWQMAYAEIYITDTLWPDFGRREFHLALLAYQQRERRFG 247
>gi|148653597|ref|YP_001280690.1| undecaprenyl diphosphate synthase [Psychrobacter sp. PRwf-1]
gi|148572681|gb|ABQ94740.1| Undecaprenyl pyrophosphate synthetase [Psychrobacter sp. PRwf-1]
Length = 268
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 146/232 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGN R+A A G+ + GH G E + +V ++GI+ LT+FAFS NW+R
Sbjct: 23 PKHIAIIMDGNNRYAKAHGMAKGQGHVAGKESLDPLVEYCVKIGIEVLTVFAFSSENWQR 82
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE++ L++L+ + + + ++K NI++R IG+R L +++ + +AE +T + +
Sbjct: 83 PPSEVALLMRLLSATITEQMPRMQKYNIRLRFIGDRSQLSEELQAQMADAEAKTAAHDAM 142
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA +Y + +I+ A + + Q + G++ + D+ + + + + +DVPD D++IRTGG
Sbjct: 143 TLVIAISYGGQWDIANAARQLAQQVAQGTLAAEDITVATLGQKVQLADVPDVDMLIRTGG 202
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ AY+E F WPDF+ + L +++ R RRFG S++
Sbjct: 203 EYRISNFLLWQSAYAELFFTDTLWPDFAAKELNSMLFEFSRRQRRFGKTSEQ 254
>gi|300715401|ref|YP_003740204.1| Undecaprenyl pyrophosphate synthetase [Erwinia billingiae Eb661]
gi|299061237|emb|CAX58346.1| Undecaprenyl pyrophosphate synthetase [Erwinia billingiae Eb661]
Length = 251
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/239 (39%), Positives = 141/239 (58%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P H+ IIMDGNGRWA RG R +GH+ G++ V+ A + LT++AFS
Sbjct: 12 LQEGENPRHVAIIMDGNGRWAKTRGKLRISGHKAGVKSVRRAVSFAVSNNLTALTLYAFS 71
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP E+ L++L L SL K+N+++R+IG+ D + ++ AE+ T
Sbjct: 72 SENWNRPPQEVMALMELFVWALDSEVKSLHKHNVRLRIIGDIGRFSDRLQERIRRAEELT 131
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ N GL L IA NY R +I ++ I + ++ G + ++ + +YL +++ DL
Sbjct: 132 QQNNGLTLNIAANYGGRWDIIHGVRKIAEQVQEGLIRPDQIEEETLGQYLCLNELAPVDL 191
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
+IRTGGE R+S+FLLWQVAY+EF F WPDF ++F ALN + R+RRFGG + G
Sbjct: 192 VIRTGGEHRISNFLLWQVAYAEFFFTDVLWPDFDEQVFEGALNAFAQRERRFGGAAPGG 250
>gi|291567169|dbj|BAI89441.1| undecaprenyl pyrophosphate synthetase [Arthrospira platensis
NIES-39]
Length = 253
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 139/232 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ +IMDGNGRWA RGLPR GHR+GI+ ++ + GI LT++AFS NW R
Sbjct: 21 PNHVAVIMDGNGRWAKRRGLPRTMGHRRGIDALKNLLRYCRDWGINALTVYAFSTENWGR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P+ E+ L+ L + L + + + +++R +GN L + ++++ + TR N G+
Sbjct: 81 PLEEVDFLMALFERVLMRELEEMMEEEVRIRFVGNLHRLPASLRECIEKSMETTRNNEGI 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY R+EI RA + I ++ G++ +D +L KYL T+ DPDL+IRT G
Sbjct: 141 LFTVATNYGGREEIVRACQAIANQVKQGTLEPEAIDGALFEKYLYTAGTCDPDLLIRTSG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AY+E WPDF+ F AL Y R+RRFG + +
Sbjct: 201 ELRISNFLLWQIAYAEIYVTDTLWPDFNSHEFHLALCSYQQRERRFGKVGTR 252
>gi|21220970|ref|NP_626749.1| undecaprenyl phosphate synthetase [Streptomyces coelicolor A3(2)]
gi|256787869|ref|ZP_05526300.1| undecaprenyl phosphate synthetase [Streptomyces lividans TK24]
gi|289771753|ref|ZP_06531131.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces lividans
TK24]
gi|42560016|sp|Q9L2H4|UPPS1_STRCO RecName: Full=Undecaprenyl pyrophosphate synthase 1; Short=UPP
synthase 1; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase 1;
AltName: Full=Undecaprenyl diphosphate synthase 1;
Short=UDS 1
gi|6752352|emb|CAB69730.1| undecaprenyl phosphate synthetase [Streptomyces coelicolor A3(2)]
gi|289701952|gb|EFD69381.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces lividans
TK24]
Length = 277
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 91/228 (39%), Positives = 138/228 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ I+MDGNGRWA RGLPR GH+ G E +++ A E+G+ N++++AFS NW+R
Sbjct: 34 PEHVAIVMDGNGRWAKERGLPRTEGHKVGAEQVMDVLQGAIEMGVGNISLYAFSTENWKR 93
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + F++K +L + ++VR G L + L+ A++QT+ N L
Sbjct: 94 SPEEVRFLMNFNRDFIRKSRDTLDELGVRVRWAGRMPRLWKSVAKELQVAQEQTKDNDRL 153
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L+ NY R EI+ A + + +D+ +G + V+ +AKYL D+PD DL +R G
Sbjct: 154 TLYFCMNYGGRAEIADAAQALAEDVRAGKLDPAKVNEKTLAKYLYYPDMPDVDLFLRPSG 213
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S++LLWQ AY+E VF WPDF R + A ++ RDRRFGG
Sbjct: 214 EQRTSNYLLWQSAYAEMVFQDVLWPDFDRRDLWRACLEFASRDRRFGG 261
>gi|296387841|ref|ZP_06877316.1| undecaprenyl pyrophosphate synthetase [Pseudomonas aeruginosa PAb1]
Length = 238
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 92/229 (40%), Positives = 139/229 (60%)
Query: 14 IGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVS 73
+ IIMDGN RWA R LP AGH+ G++ ++ AE G++ LT+FAFS NW+RP
Sbjct: 1 MAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAEAGVEVLTLFAFSSENWQRPAD 60
Query: 74 EISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLF 133
E+S L++L L++ L +N I++R+IG+R ++ ++EAE T NT L
Sbjct: 61 EVSALMELFLVALRREVRKLDENGIRLRIIGDRTRFHPELQAAMREAEAATAGNTRFLLQ 120
Query: 134 IAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKR 193
+A NY + +I +A + + ++++ G + D+ + L+ L T D P PDL IRTGGE R
Sbjct: 121 VAANYGGQWDIVQAAQRLAREVQGGHLAVDDISAELLQGCLVTGDQPLPDLCIRTGGEHR 180
Query: 194 LSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+S+FLLWQ+AY+E F +WPDF AL ++ R RRFG S++
Sbjct: 181 ISNFLLWQLAYAELYFSDLFWPDFKHAAMRAALADFSKRQRRFGKTSEQ 229
>gi|261493561|ref|ZP_05990081.1| di-trans,poly-cis-decaprenylcistransferase [Mannheimia haemolytica
serotype A2 str. BOVINE]
gi|261495399|ref|ZP_05991847.1| di-trans,poly-cis-decaprenylcistransferase [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261308904|gb|EEY10159.1| di-trans,poly-cis-decaprenylcistransferase [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261310743|gb|EEY11926.1| di-trans,poly-cis-decaprenylcistransferase [Mannheimia haemolytica
serotype A2 str. BOVINE]
Length = 237
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/228 (41%), Positives = 140/228 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R GH+ G++ V+ AA+ I+ LT++AFS NW R
Sbjct: 9 PKHVAIIMDGNGRWAKQKGKLRIFGHQNGVKAVRSAVSFAAKHHIQVLTLYAFSSENWSR 68
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+S L+ L L L KNNI++++IG++ + +++ + E+E T NTGL
Sbjct: 69 PETEVSALMSLFMKALDSEVKKLHKNNIRLKIIGDKSAFSENLQKRIAESEKLTENNTGL 128
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY +I +A + + ++S + + +L ++L T + P DL+IRT G
Sbjct: 129 ILNIAANYGGYWDIVQAAQQLAVHVKSEQLAVEQITPALFQQHLVTENQPQVDLLIRTSG 188
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R+S+FLLWQ+AY+E F P WPDF+ E F A+ Y R+RRFGG
Sbjct: 189 EQRISNFLLWQIAYAELFFSPVLWPDFNDEAFSDAIYAYQQRERRFGG 236
>gi|91775879|ref|YP_545635.1| undecaprenyl pyrophosphate synthetase [Methylobacillus flagellatus
KT]
gi|91709866|gb|ABE49794.1| Undecaprenyl pyrophosphate synthetase [Methylobacillus flagellatus
KT]
Length = 250
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 105/232 (45%), Positives = 141/232 (60%), Gaps = 3/232 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH++G+EV E+V A G+K LT+FAFS NWRR
Sbjct: 18 PQHIAIIMDGNGRWAKKRFLPRVAGHKRGVEVVREVVRLCANHGVKYLTLFAFSSENWRR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L L++ L +NNI +R+IG+ D ++ + EAE +T N L
Sbjct: 78 PADEVSFLMNLFMEALQQEVGKLDENNICLRMIGDCSRFDPALVAKIAEAEARTAGNDRL 137
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY R +I +A+K + + + + D +A YL P+PDL IRTGG
Sbjct: 138 TLTVAVNYGGRWDIMQAMKRLLAEKPDLAQSFTEED---LAAYLSMHYAPEPDLFIRTGG 194
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FLLWQ+AYSE F WPDF F A+ Y R+RRFG S++
Sbjct: 195 EQRVSNFLLWQLAYSELYFTETLWPDFDEAEFKRAIVSYQQRERRFGRTSEQ 246
>gi|47093940|ref|ZP_00231677.1| undecaprenyl diphosphate synthase [Listeria monocytogenes str. 4b
H7858]
gi|47017678|gb|EAL08474.1| undecaprenyl diphosphate synthase [Listeria monocytogenes str. 4b
H7858]
Length = 222
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/222 (43%), Positives = 135/222 (60%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA R LPR AGH++G++V + A +GI LT++AFS NW+RP E+
Sbjct: 1 MDGNGRWAKKRFLPRIAGHKEGMDVVKRVTRYANAIGIDVLTLYAFSTENWKRPTDEVDF 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+KL F L + N++V V+G R +L + + +++A T TGL L A N
Sbjct: 61 LMKLPVEFFDSFVPELIEENVRVNVMGYRENLPNHTMRAVEKAIADTAHCTGLTLNFALN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R EI A K +++E + D+ + +L +S + DPDL+IRT GE RLS+F
Sbjct: 121 YGGRSEIITAAKEAMKELELKGKSADDLTEEKLNDHLMSSGLGDPDLLIRTSGELRLSNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+LWQ+AYSEF F +WPDFS+E F A+ +Y R RRFGGL
Sbjct: 181 MLWQLAYSEFYFTDTHWPDFSKEDFLQAIIEYQNRSRRFGGL 222
>gi|269792545|ref|YP_003317449.1| undecaprenyl diphosphate synthase [Thermanaerovibrio
acidaminovorans DSM 6589]
gi|269100180|gb|ACZ19167.1| undecaprenyl diphosphate synthase [Thermanaerovibrio
acidaminovorans DSM 6589]
Length = 238
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/234 (40%), Positives = 136/234 (58%), Gaps = 6/234 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M P H+GIIMDGNGRWA RGLPR GH G++ V AA ++GI+ L+++AFS
Sbjct: 9 MMDRVPSHVGIIMDGNGRWAQERGLPRIMGHHAGVKKVEVAVRAAKDLGIRYLSLYAFSS 68
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+R E+ L+ L + ++K L++ ++ G+ L DD+ ++ E +TR
Sbjct: 69 ENWKRGRGEVGGLMGLFRYYIKMKVRQLREEGGRLLFAGSADGLPDDVREIMAYGEQETR 128
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
+ + L + NY R EI A+ +D D+D ++L D+PDPDLI
Sbjct: 129 HCSDITLVVCLNYGGRREILDAVGKAVRD------GVQDLDEETFRRFLYLPDLPDPDLI 182
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRTGGE R+S+F L+Q AYSE F P+YWPDF R+ A+ Y RDRR+GG+
Sbjct: 183 IRTGGEMRISNFWLFQCAYSELYFSPKYWPDFDRDDLVEAVMDYVRRDRRYGGV 236
>gi|239617980|ref|YP_002941302.1| undecaprenyl diphosphate synthase [Kosmotoga olearia TBF 19.5.1]
gi|239506811|gb|ACR80298.1| undecaprenyl diphosphate synthase [Kosmotoga olearia TBF 19.5.1]
Length = 231
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/231 (41%), Positives = 135/231 (58%), Gaps = 6/231 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA RGL R GH+KG EV + + AAE+GI+ LT++AFS NW+R
Sbjct: 4 PTHIAIIMDGNGRWAKQRGLRRTEGHKKGAEVADSVARWAAELGIRYLTLYAFSTENWKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L L+ ++ + IK++ +G L +I + E +T N L
Sbjct: 64 PKEEVEFLFNLLVRYINNRLNEIINEGIKLKFLGRIQQLPGNIRRFCENIEQKTAKNDRL 123
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL IA NY R EI A+ I + VD + +YL ++P+PDLIIRT G
Sbjct: 124 NLIIALNYGGRAEIIDAVNKIL------AAKLKKVDEHIFERYLYLPEMPEPDLIIRTSG 177
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
EKRLS+FL+W+ AYSE F + WP+F+++ F A+ Y+ R R+FG + K
Sbjct: 178 EKRLSNFLMWESAYSELYFCEKLWPEFTKDDFLQAIEDYSRRKRKFGAVIK 228
>gi|254168484|ref|ZP_04875328.1| undecaprenyl diphosphate synthase [Aciduliprofundum boonei T469]
gi|197622539|gb|EDY35110.1| undecaprenyl diphosphate synthase [Aciduliprofundum boonei T469]
Length = 258
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/229 (42%), Positives = 141/229 (61%), Gaps = 2/229 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+GIIMDGN R+A + GHR+G + E++ E+GIK LT++AFS N++R
Sbjct: 29 PKHVGIIMDGNRRFARELDMKPTQGHREGKDKLEEVIEWCREIGIKILTVYAFSTENFKR 88
Query: 71 PVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
E+ EL++L LKK + KN I+++VIG R L +++ ++ AE++T+
Sbjct: 89 SREEVLELMRLFIENLKKAADDERVHKNKIRIKVIGQRDVLPEELREAIEYAEERTKNYD 148
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
IA Y R+EI +AIK I Q+++ G + D+ + K+L T D+PDPDLI+RT
Sbjct: 149 EFFFNIAIAYGGREEIIKAIKEIAQEVKDGKLEVEDITEETVRKHLYTGDLPDPDLILRT 208
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
GE+R+S+FLLWQ AYSEF F YWP F + F A+ Y +R RRFG
Sbjct: 209 SGEERISNFLLWQSAYSEFYFADIYWPTFRKIDFLRAIRSYQMRQRRFG 257
>gi|269118694|ref|YP_003306871.1| undecaprenyl diphosphate synthase [Sebaldella termitidis ATCC
33386]
gi|268612572|gb|ACZ06940.1| undecaprenyl diphosphate synthase [Sebaldella termitidis ATCC
33386]
Length = 231
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/237 (39%), Positives = 135/237 (56%), Gaps = 6/237 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M P+HI IIMDGNGRWA +RGL R GH++G + ++ + G+K LT++AFS
Sbjct: 1 MDRKIPEHIAIIMDGNGRWAKSRGLARVEGHKRGADTLEFVLRQSVSFGVKYLTVYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP +E+S L+ L +L LK+ +I++ V G + +L +KE ED
Sbjct: 61 ENWKRPKTEVSALMNLFSKYLDNKKDELKEQDIRLVVSGTEEGVSKKLLKKIKETEDYLS 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
L IAFNY R EI+ I + + + + YL D+PDP+L+
Sbjct: 121 DCNTLTFNIAFNYGGRKEITDGINKLLAEGRTS------ITEDEFQNYLYQPDIPDPELV 174
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRT GE R+S+FLLW++AYSEF YWPDF + + A+ +N R+RRFGG+ K
Sbjct: 175 IRTSGEFRISNFLLWEIAYSEFYITNTYWPDFDKNEYEKAIEWFNNRERRFGGVDAK 231
>gi|15603854|ref|NP_246928.1| hypothetical protein PM1989 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|42559876|sp|Q9CJL4|UPPS_PASMU RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|12722429|gb|AAK04073.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 240
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/228 (41%), Positives = 137/228 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R GH+ G++ E V+ A +VGIK LT++AFS NW R
Sbjct: 10 PQHVAIIMDGNGRWAQQKGKMRIFGHKNGVKAVREAVSYARKVGIKVLTLYAFSSENWNR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L L L KNNIK+ ++G+ + + +AE T NT L
Sbjct: 70 PKKEVNALMALFMQALDLEVKKLHKNNIKLNILGDVTGFSASLQNKIHQAEKLTENNTAL 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY +I +A K++ Q ++ G + ++++ ++ + L T + P DL+IRT G
Sbjct: 130 TLNIAANYGGCWDIVQATKSLAQQVKEGKLAVDEINAQVLQQALVTKEQPQVDLLIRTSG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R+S+FLLWQ+AY+E F WPDF+ + F A+ Y R RRFGG
Sbjct: 190 EQRISNFLLWQIAYAELYFSDVLWPDFNEKEFNEAIIAYQQRHRRFGG 237
>gi|313679983|ref|YP_004057722.1| undecaprenyl pyrophosphate synthetase [Oceanithermus profundus DSM
14977]
gi|313152698|gb|ADR36549.1| Undecaprenyl pyrophosphate synthetase [Oceanithermus profundus DSM
14977]
Length = 228
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 138/233 (59%), Gaps = 7/233 (3%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P H+ IIMDGNGRWA ARGLPR GH G E V+ A E G++ LT+FAFS NW
Sbjct: 2 SLPRHVAIIMDGNGRWAEARGLPRYRGHLAGHGAIREAVSGALEAGVEWLTLFAFSTENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RRP SE+ L +L +S L++ L + +++ +IG+RL L D + ++ AE +
Sbjct: 62 RRPSSEVRALFELFESVLREETPELVERGVRIHIIGDRLHLPDSLRAAIEAAERASANAD 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
L+L A NY R EI RA + ++ ++SL A + ++PDPDLIIRT
Sbjct: 122 RLHLVGALNYGGRQEIVRAAAQL------AALGEPITEASLRAAFY-LPEMPDPDLIIRT 174
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
GE RLS+F LWQ AYSE WPDF++E F HA+ Y R RRFGG+ +
Sbjct: 175 SGEMRLSNFFLWQSAYSEIWVTETLWPDFTKEEFAHAIRAYQTRRRRFGGVPQ 227
>gi|224437221|ref|ZP_03658198.1| hypothetical protein HcinC1_04597 [Helicobacter cinaedi CCUG 18818]
Length = 237
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/236 (41%), Positives = 144/236 (61%), Gaps = 3/236 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
++++ P HI IIMDGNGRWA +G R GH++G +V EI A I LT++AFS
Sbjct: 3 LNNALPQHIAIIMDGNGRWAKQQGKKRTQGHKEGAKVVQEITQWCANQKIPFLTLYAFST 62
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP EI L+KL++ +LK+ + KNNI+ RVIG+ + + + E E T+
Sbjct: 63 ENWKRPKMEIDYLMKLLEKYLKEERTTYIKNNIRFRVIGDIDAFSTPLKNAIFELEHLTQ 122
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIF--QDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
+T L +A NY S +EI+R + Q + + +V + LI LDT+ +P+ D
Sbjct: 123 NHTNLTQILALNYGSHNEIARTFLKLANSQAQRLSKLTTQEV-TELINANLDTATLPNVD 181
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
++IRTGGEKR+S+FLLWQ +Y+E F P WPDF+ L++++ R RRFGGL
Sbjct: 182 MLIRTGGEKRISNFLLWQASYAELFFTPTLWPDFTANELDSLLSEFSQRQRRFGGL 237
>gi|153823581|ref|ZP_01976248.1| undecaprenyl diphosphate synthase [Vibrio cholerae B33]
gi|126518897|gb|EAZ76120.1| undecaprenyl diphosphate synthase [Vibrio cholerae B33]
Length = 232
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 137/220 (62%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA A+G PR GH+ G+ + ++ +A +GIK +T+FAFS NWRRP E+
Sbjct: 1 MDGNGRWAKAQGKPRVFGHKNGVAAVRKTISTSARLGIKAVTLFAFSSENWRRPEEEVGV 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L + L L KNN+++RVIG++ + + + +AE T NTG+ + IA N
Sbjct: 61 LMELFMTVLSTEIKKLHKNNLRLRVIGDKSRFSERLQTKIAQAEQLTASNTGMVVNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y + +I +A + + + + G + D+D + ++L +D+PD DL+IRT GE R+S+F
Sbjct: 121 YGGQWDILQATQALAEKVTQGELQPSDIDEDVFKQHLTMADLPDVDLLIRTSGECRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+LWQ+AY+E F P +WP+F A+ + R+RRFG
Sbjct: 181 MLWQLAYAEMYFTPVFWPEFDENCLIEAVTWFVNRERRFG 220
>gi|304389666|ref|ZP_07371626.1| di-trans,poly-cis-decaprenylcistransferase [Mobiluncus curtisii
subsp. curtisii ATCC 35241]
gi|304327070|gb|EFL94308.1| di-trans,poly-cis-decaprenylcistransferase [Mobiluncus curtisii
subsp. curtisii ATCC 35241]
Length = 260
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/237 (40%), Positives = 135/237 (56%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ S +S H+ IIMDGNGRWA A+GL R AGH G + +A A E G+K L+++
Sbjct: 18 LPSGLSRGAVSHVAIIMDGNGRWANAQGLNRTAGHEAGEYALMDTIAGAVEAGVKFLSVY 77
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+R +E+ L+ + L+ L ++VR G L +L L+ AE
Sbjct: 78 AFSTENWKRSPAEVKFLMGYSRRVLRDRRDELNAWGVRVRWSGREGRLWKSVLTELRRAE 137
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
TR NTG L + NY R E++ A + + Q + +G++ + + A+ L DVPD
Sbjct: 138 TLTRGNTGTQLIMCLNYGGRAELADAARKLAQRVAAGTLNPERITEATFARELYLPDVPD 197
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DL+IRT GE+R S+FL WQ AY+E VF PE WP++ R + L Y RDRRFGG
Sbjct: 198 VDLLIRTSGEQRTSNFLPWQAAYAELVFAPEPWPEYGRAALWRDLLVYQHRDRRFGG 254
>gi|89901451|ref|YP_523922.1| undecaprenyl diphosphate synthase [Rhodoferax ferrireducens T118]
gi|89346188|gb|ABD70391.1| Undecaprenyl pyrophosphate synthetase [Rhodoferax ferrireducens
T118]
Length = 242
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/238 (39%), Positives = 142/238 (59%), Gaps = 2/238 (0%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S SS P HI +IMDGN RWA GLP GH G IV A AE G++ LT+FAF
Sbjct: 6 SSASSPVPQHIAVIMDGNRRWAKQHGLPVALGHANGARQVRRIVQACAERGVRYLTLFAF 65
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRRP E+S L+ L+ +L+K ++ ++++++G+ I ++ +A+++
Sbjct: 66 STENWRRPQDEVSSLMGLMTLYLQKEVKNMSAKGVRLKIVGDISGFSARIQELILQAQEK 125
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T N + L IA NY R ++ A+K+ +Q G + +D + ++++L S PDPD
Sbjct: 126 TAHNDTITLTIAANYGGRWDMVEAVKS-WQTAHPGESV-NGIDEAALSEHLGLSYAPDPD 183
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
L+IRTGGE R+S+F+LWQ+AY+E F WP F+ + AL Y R+RRFGG +K
Sbjct: 184 LLIRTGGESRISNFMLWQLAYTELFFTDALWPSFTPDELDRALTWYGTRERRFGGSTK 241
>gi|328948073|ref|YP_004365410.1| Undecaprenyl pyrophosphate synthase [Treponema succinifaciens DSM
2489]
gi|328448397|gb|AEB14113.1| Undecaprenyl pyrophosphate synthase [Treponema succinifaciens DSM
2489]
Length = 237
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 98/229 (42%), Positives = 143/229 (62%), Gaps = 4/229 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+GIIMDGNGRWA R L R GH +G++ EI AA+++G+K LT + FS NW+R
Sbjct: 11 PVHVGIIMDGNGRWAKKRNLLRTNGHTEGLKRAKEIAKAASDIGLKFLTFYVFSTENWKR 70
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ LI S+L K F K NN++VR++G++ L +++ + + E T TGL
Sbjct: 71 TEQEVGFLMNLIHSYLLKEFDFCKYNNVRVRMLGDKSRLPENVRKDINQIEKDTENLTGL 130
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ +A NY RDEI R +K + + ++ S S I+K D ++PD DL+IRTGG
Sbjct: 131 TICLAINYGGRDEIIRGVKKLIAEGKTESEIS----EESISKSFDVPELPDVDLLIRTGG 186
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
EKRLS+FL+W AY+E +F WPD+ +E FF + ++ R RRFG +
Sbjct: 187 EKRLSNFLMWHSAYAELLFSDTLWPDYYKEEFFKDIGEFQKRSRRFGAV 235
>gi|326773536|ref|ZP_08232819.1| di-trans,poly-cis-decaprenylcistransferase [Actinomyces viscosus
C505]
gi|326636766|gb|EGE37669.1| di-trans,poly-cis-decaprenylcistransferase [Actinomyces viscosus
C505]
Length = 286
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 95/238 (39%), Positives = 140/238 (58%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ ++S P H+ ++MDGNGRWA ARGLPR GHR G ++ A A E+G+K L+++AFS
Sbjct: 26 LPAASLPQHVAVVMDGNGRWANARGLPRTEGHRVGEANMLDVAAGAIEIGVKELSVYAFS 85
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRR E+ ++ + L+ L N+++R IG L +L L+EAE T
Sbjct: 86 TENWRRSPGEVRFIMGFARKVLRVQRDVLNSWNVRLRWIGRTPRLWKSVLHELREAERVT 145
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NTGL L + NY R EI+ A + I +D+ +G + + ++ I +YL + + D DL
Sbjct: 146 AHNTGLVLNLCINYGGRAEIADATRAIAEDVAAGRLKASSINEKTIQRYLYSPTMRDVDL 205
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTG E+R S+FL+W +Y+E F P WPDF+R + A Y R+RR+GG K
Sbjct: 206 FIRTGDEQRTSNFLMWSSSYAELYFSPLAWPDFNRTELWKACEAYAGRERRYGGAVDK 263
>gi|290960572|ref|YP_003491754.1| undecaprenyl phosphate synthetase [Streptomyces scabiei 87.22]
gi|260650098|emb|CBG73214.1| undecaprenyl phosphate synthetase [Streptomyces scabiei 87.22]
Length = 278
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 92/228 (40%), Positives = 135/228 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I+MDGNGRWA RGLPR GH+ G E +++ + E+G++N++++AFS NW+R
Sbjct: 35 PKHVAIVMDGNGRWAKERGLPRTEGHKVGAERVLDVLQGSVEIGVRNISLYAFSTENWKR 94
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + F++K L I+VR +G L + L+ A++QT+ N L
Sbjct: 95 SPDEVRFLMNFNRDFIRKTRDQLDALGIRVRWVGRMPKLWKSVAKELQVAQEQTKDNDRL 154
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L+ NY R EI+ A + I +D+ +G + V AKYL D+PD DL +R G
Sbjct: 155 TLYFCMNYGGRAEIADAAQAIAEDVRAGRLDPSKVTEKTFAKYLYYPDMPDVDLFLRPSG 214
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S++LLWQ AY+E VF WPDF R + A ++ RDRRFGG
Sbjct: 215 EQRTSNYLLWQSAYAEMVFQDVLWPDFDRRDLWRACVEFASRDRRFGG 262
>gi|54023420|ref|YP_117662.1| putative undecaprenyl pyrophosphate synthetase [Nocardia farcinica
IFM 10152]
gi|54014928|dbj|BAD56298.1| putative undecaprenyl pyrophosphate synthetase [Nocardia farcinica
IFM 10152]
Length = 267
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/228 (41%), Positives = 136/228 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ ++MDGNGRWA RGLPR AGH +G V + V E+G+K L+ +AFS NWRR
Sbjct: 38 PNHVALVMDGNGRWAQERGLPRTAGHERGEAVLMDTVEGCIEIGVKWLSAYAFSTENWRR 97
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ + + ++VR G R L ++ L+ AE+ T+ NT L
Sbjct: 98 SPEEVRFLMGFNRDVIRRRRDEMHEMGVRVRWAGRRPRLWRSVIKELEVAEELTKDNTVL 157
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R EI+ A + I + + +G + VD +A++LD D+PD DL +R G
Sbjct: 158 TLTMCVNYGGRAEIADAAREIARRVAAGEIDPERVDERTVARFLDEPDMPDVDLFLRPSG 217
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E R S+FLLWQ AY+E+VF +PDF R + A QY RDRRFGG
Sbjct: 218 EFRTSNFLLWQSAYAEYVFQETLFPDFDRRNLWEACLQYASRDRRFGG 265
>gi|319937401|ref|ZP_08011808.1| undecaprenyl pyrophosphate synthetase [Coprobacillus sp. 29_1]
gi|319807767|gb|EFW04360.1| undecaprenyl pyrophosphate synthetase [Coprobacillus sp. 29_1]
Length = 249
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 136/231 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IMDGNGRWA R +PR GH +G + + A +G+K +T++AFS N++R
Sbjct: 19 PGHIAFIMDGNGRWAKKRKMPRTYGHHEGTKTIRTLALEANRLGVKAMTVYAFSTENFKR 78
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
SE+ + KL K F L +NN+++R IG+ + ++KEA +T +N+GL
Sbjct: 79 EASEVEYIFKLPKEFFNLYLKELMENNVQIRYIGHLEMAPIETQNIIKEAIQRTSVNSGL 138
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L AF Y RDEI A K I + ++G + D+ ++L T D+P DL++R+ G
Sbjct: 139 ILTFAFIYGGRDEIVEATKVICEKYKNGEISLDDMTEDYFEQHLMTKDLPPVDLMVRSSG 198
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E RLS+FL WQ+AY+EF+F WPDF E A+ Y R+RRFGG+ K
Sbjct: 199 ECRLSNFLPWQLAYAEFIFDETLWPDFDEEHLHRAIAIYQGRERRFGGVLK 249
>gi|300788451|ref|YP_003768742.1| undecaprenyl pyrophosphate synthetase [Amycolatopsis mediterranei
U32]
gi|299797965|gb|ADJ48340.1| undecaprenyl pyrophosphate synthetase [Amycolatopsis mediterranei
U32]
Length = 271
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 90/228 (39%), Positives = 138/228 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ ++MDGNGRWA RGLPR GH++G V ++ + A E+G+K L+++AFS NW+R
Sbjct: 36 PKHVALVMDGNGRWANQRGLPRIEGHKRGEAVMIDVASGAVELGVKWLSVYAFSTENWKR 95
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ L +++R G R L ++ L+ AE++T+ NT L
Sbjct: 96 SPEEVRFLMGFNRDTIRRQVDYLGSIGVRIRWAGRRPKLWASVIKELQAAEEKTKDNTAL 155
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
N+ + NY R E+ A++ I QD+ +G + V+ I KYL D+PD DL +R G
Sbjct: 156 NMTMCVNYGGRAELGDAMQRIAQDVAAGKLNPDKVNEKTIGKYLYQPDMPDVDLFLRPSG 215
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S+FLLWQ AY+E V+ +PDF R + A ++ RDRRFGG
Sbjct: 216 EQRTSNFLLWQSAYAEMVYQDTLFPDFDRTHLWRACLEFAKRDRRFGG 263
>gi|158313953|ref|YP_001506461.1| undecaprenyl diphosphate synthase [Frankia sp. EAN1pec]
gi|158109358|gb|ABW11555.1| undecaprenyl diphosphate synthase [Frankia sp. EAN1pec]
Length = 333
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 97/229 (42%), Positives = 141/229 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+GI+MDGNGRWA RGLPR GH G E + V A E+G++ L+++AFS NW+R
Sbjct: 100 PQHVGIVMDGNGRWAKLRGLPRTKGHEAGEEALFDCVEGAIEMGVRWLSVYAFSTENWKR 159
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E++ L++ + + + ++VR G R L +++ L+ AE +TR N L
Sbjct: 160 SPDEVAFLMRFTDGVFGRRIDDMDELGVRVRWAGRRPRLWGNVIRRLESAEQRTRDNDRL 219
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R E++ A I +D+ +G + V+ +A+YLD D+PD DL+IRT G
Sbjct: 220 TLVMCVNYGGRAELADAAAAIARDVRAGLLRPERVNEETVARYLDEPDMPDVDLLIRTSG 279
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+RLS+FLLWQ AY+EF F+P WPDF R + A +Y RDRR+GG+
Sbjct: 280 EQRLSNFLLWQAAYAEFSFVPTLWPDFDRRDLWLACEEYARRDRRYGGI 328
>gi|148360882|ref|YP_001252089.1| undecaprenyl diphosphate synthetase [Legionella pneumophila str.
Corby]
gi|296106052|ref|YP_003617752.1| undecaprenyl pyrophosphate synthetase [Legionella pneumophila
2300/99 Alcoy]
gi|148282655|gb|ABQ56743.1| undecaprenyl diphosphate synthetase [Legionella pneumophila str.
Corby]
gi|295647953|gb|ADG23800.1| undecaprenyl pyrophosphate synthetase [Legionella pneumophila
2300/99 Alcoy]
Length = 238
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 92/236 (38%), Positives = 143/236 (60%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M+ P HI ++MDGNGRWA +RGLPR GH+ G++ +I+ E I L++FAFS
Sbjct: 1 MNHKLPQHIAVVMDGNGRWAESRGLPRVEGHKAGLDSVKKIINCCLEKKISCLSLFAFSS 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RPV+E++ L++L L+K L ++ I+++ G+R L + + +AE T+
Sbjct: 61 ENWSRPVTEVNFLMELFLEALRKEIDDLNQHGIRLKFTGDREPLSQVLQKQMCDAEALTK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N L L + NY + +I A K + + G + +++ ++ A++LDTS +P+PDL
Sbjct: 121 NNQQLILNVVVNYGGKWDIVTAAKKLIHAVLDGKLACDEINEAVFAQFLDTSGMPEPDLF 180
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
IRT GE R+S+F LWQ+AY+E F +WPDF+ F AL + R RRFG +S+
Sbjct: 181 IRTSGELRISNFFLWQLAYTELYFTDVHWPDFNEHEFELALTSFAKRARRFGQISQ 236
>gi|74316807|ref|YP_314547.1| undecaprenyl pyrophosphate synthetase [Thiobacillus denitrificans
ATCC 25259]
gi|74056302|gb|AAZ96742.1| di-trans-poly-cis-decaprenylcistransferase [Thiobacillus
denitrificans ATCC 25259]
Length = 245
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 103/237 (43%), Positives = 146/237 (61%), Gaps = 7/237 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
++S P HI IIMDGNGRWA R +PR AGHRKG+E ++ A AE G+ +LT+FAFS
Sbjct: 11 VTSDVPRHIAIIMDGNGRWAKRRFMPRFAGHRKGVEALRGVIRACAERGVTHLTVFAFSS 70
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NWRRP E++ L++L L+ L +N I+ RVIG+ + I +++EAE TR
Sbjct: 71 ENWRRPQEEVTLLMELFLRALENEVAKLHENGIRFRVIGDLSGFSERIQTLIREAETLTR 130
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N+ L +A NY R ++ +A+K + + SG V + +A +L +D P+PDL
Sbjct: 131 DNSRLTFTVAANYGGRWDVVQAVKKL---VASG----EPVSEAALAAHLSLADTPEPDLF 183
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTGGE+R+S+FLLWQ+AY+E F WPDF A+ Y R+RRFG S++
Sbjct: 184 IRTGGEQRISNFLLWQLAYTELYFTDALWPDFDAAALDAAIASYRTRERRFGRTSEQ 240
>gi|329120953|ref|ZP_08249584.1| di-trans,poly-cis-decaprenylcistransferase [Dialister
micraerophilus DSM 19965]
gi|327471115|gb|EGF16569.1| di-trans,poly-cis-decaprenylcistransferase [Dialister
micraerophilus DSM 19965]
Length = 240
Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 96/229 (41%), Positives = 136/229 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ II+DGNGRW G R GH+ G +IV +AA GIK LT++AFS NW+R
Sbjct: 8 PQHVAIILDGNGRWGKKHGRERTYGHKFGAANVKKIVRSAASSGIKKLTLYAFSTENWKR 67
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L K +L + L ++N++V V+G+ L + +K E+ T+ N GL
Sbjct: 68 PKLEVKFLMTLFKEYLIEQLRELTEDNVQVHVVGDVSKLSKSLQEEIKSCENDTKNNDGL 127
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R E+ A + I D+++G + ++D I L SD D DL+IRTGG
Sbjct: 128 ILNIAINYGGRQELIHAFRKIASDVKAGILNPSEIDEENIKDALYASDADDVDLLIRTGG 187
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+R+S+FLLWQ++YSE F WPDF +A+ + R+RRFGGL
Sbjct: 188 EQRISNFLLWQISYSELYFTSVLWPDFDERELENAIKWFVNRNRRFGGL 236
>gi|157738402|ref|YP_001491086.1| undecaprenyl pyrophosphate synthetase [Arcobacter butzleri RM4018]
gi|315636697|ref|ZP_07891927.1| di-trans,poly-cis-decaprenylcistransferase [Arcobacter butzleri
JV22]
gi|157700256|gb|ABV68416.1| undecaprenyl pyrophosphate synthetase [Arcobacter butzleri RM4018]
gi|315479012|gb|EFU69715.1| di-trans,poly-cis-decaprenylcistransferase [Arcobacter butzleri
JV22]
Length = 234
Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 98/229 (42%), Positives = 138/229 (60%), Gaps = 7/229 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA RGL R AGH +G +V EI A++GI+ LT++AFS NW R
Sbjct: 13 PSHIAIIMDGNGRWAKQRGLKRTAGHEEGAKVVREITKFCAKIGIEYLTLYAFSTENWAR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL++ LK +NNI+ + IG+ + ++ + E++T +GL
Sbjct: 73 PKLEVEYLMKLLEKHLKNELEVFLENNIRFKAIGDLSKFSKSLQNIINQIEEKTSSCSGL 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY S+DEI RAIK + + + + +++S LDT+ + DL+IRT G
Sbjct: 133 TQVLALNYGSKDEIIRAIKKLNE--QHLEITEENLESC-----LDTAGMSPVDLLIRTSG 185
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS++LLWQ AY+E F YWPDFS L+ Y R+RRFGG+
Sbjct: 186 EVRLSNYLLWQNAYAEMFFTKTYWPDFSVAELKKILDDYKNRERRFGGI 234
>gi|254495936|ref|ZP_05108844.1| undecaprenyl diphosphate synthetase [Legionella drancourtii LLAP12]
gi|254354814|gb|EET13441.1| undecaprenyl diphosphate synthetase [Legionella drancourtii LLAP12]
Length = 240
Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 95/236 (40%), Positives = 138/236 (58%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M P H+ I+MDGNGRWA +RGLPR GH+ G+E +++ + I L++FAFS
Sbjct: 1 MEHKIPQHVAIVMDGNGRWAESRGLPRIDGHKAGVESVKKMIRSCMTKKIACLSLFAFSS 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RPV E++ L++L L+K L ++ I++R G+R L + ++EAE T
Sbjct: 61 ENWSRPVDEVNFLMELFIESLRKELAELNQHGIRMRFTGDRSLLSSILQEQMREAELITA 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N L L + NY + ++ A K I Q + G++ ++D A+ LDT +PDPDL
Sbjct: 121 NNAQLTLNVVVNYGGKWDLVTAAKKIAQAVAEGTLALDEIDEPRFAQCLDTDGLPDPDLF 180
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
IRT GE R+S+F LWQ+AY+E F +WPDF AL ++ R RRFG +SK
Sbjct: 181 IRTSGELRISNFFLWQLAYTELYFTDVHWPDFGEAELELALASFSKRKRRFGNVSK 236
>gi|256825023|ref|YP_003148983.1| Undecaprenyl pyrophosphate synthetase [Kytococcus sedentarius DSM
20547]
gi|256688416|gb|ACV06218.1| Undecaprenyl pyrophosphate synthetase [Kytococcus sedentarius DSM
20547]
Length = 264
Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 92/228 (40%), Positives = 133/228 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ ++MDGNGRWA RGLPR AGH G ++VA A E G+ NL+ +AFS NWRR
Sbjct: 24 PQHVAVVMDGNGRWANERGLPRTAGHEAGEAALLDVVAGAIEAGVPNLSAYAFSTENWRR 83
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ ++ +++ L +++R IG R L ++ L+ AE TR N L
Sbjct: 84 SPEEVRFLMGFNRAVIRRRRDQLNAWGVRMRWIGRRPRLWRGVIKELEAAEQMTRDNDRL 143
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L+ NY R E+ +++I Q++ +G + + ++ I K+L +PD DL +R+ G
Sbjct: 144 TLYFCVNYGGRAELVDGVRSIAQEVAAGRLTPGGITAATITKHLYDPRMPDVDLFLRSSG 203
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E R S+FLLWQ AY+E F WPDF R + AL +Y RDRRFGG
Sbjct: 204 EHRTSNFLLWQSAYAELDFPETLWPDFDRRHLWAALERYAGRDRRFGG 251
>gi|94970163|ref|YP_592211.1| undecaprenyl pyrophosphate synthase [Candidatus Koribacter
versatilis Ellin345]
gi|94552213|gb|ABF42137.1| Undecaprenyl pyrophosphate synthetase [Candidatus Koribacter
versatilis Ellin345]
Length = 256
Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 97/227 (42%), Positives = 136/227 (59%), Gaps = 7/227 (3%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA RGLPR AGHR G+ V A + G++ LT++AFS +NWRRP
Sbjct: 19 HVAIIMDGNGRWATQRGLPRAAGHRAGVAAVRRTVEHAPDFGVRRLTVYAFSADNWRRPS 78
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+E+ + LI+++L+ L+ +++ IG R + +L ++ E T N L L
Sbjct: 79 AEVQSIFWLIRAYLRIECERLRSAGVRLEAIGRRDRIPKGLLSEIERVESITAANRKLEL 138
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A +YSSRD I+RA + + V + +D+SL A + D DL+IRTGGEK
Sbjct: 139 RVAVDYSSRDAIARACAGLPESASPKHVRA-ALDASLSAGHGDV------DLLIRTGGEK 191
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLSDFLLW+ AY+EF F P WPDF A+N + R+RRFG +
Sbjct: 192 RLSDFLLWESAYAEFHFTPCMWPDFQPADLDAAINAFRARERRFGSV 238
>gi|317970386|ref|ZP_07971776.1| undecaprenyl pyrophosphate synthase [Synechococcus sp. CB0205]
Length = 264
Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 89/230 (38%), Positives = 134/230 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA R LPR GHR+G+E + ++ GI +LT +AFS NW R
Sbjct: 31 PAHVAVIMDGNGRWAGQRKLPRVMGHREGVEALKRTLRLCSDWGIGSLTAYAFSTENWNR 90
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L + L +L++ +++R +G+ L + + ++++A +T NTG+
Sbjct: 91 PCEEVSFLMTLFERVLANELKALEQEQVRIRFLGDLEQLPEGLQQLIQDATQRTASNTGI 150
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ NY R E+ RA + + Q++ SG +D A L T+ DPDL+IRT G
Sbjct: 151 RFNVCTNYGGRRELVRAARLLAQEVASGERDPESIDEQAFASKLLTAGESDPDLLIRTSG 210
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E+R+S+FLLWQ+AY+E WPDF AL + R RRFGG++
Sbjct: 211 EQRISNFLLWQLAYAELHITDVLWPDFDETALVSALMDFQNRQRRFGGVA 260
>gi|254524068|ref|ZP_05136123.1| undecaprenyl pyrophosphate synthetase 1 [Stenotrophomonas sp.
SKA14]
gi|219721659|gb|EED40184.1| undecaprenyl pyrophosphate synthetase 1 [Stenotrophomonas sp.
SKA14]
Length = 236
Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/225 (41%), Positives = 130/225 (57%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA R PR GHR G N + E+GI LT+FAFS NW RP E+
Sbjct: 1 MDGNGRWAQQRRRPRVIGHRAGARAVNRTIERCLELGIPALTLFAFSSENWGRPQEEVDA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+KL L + L + ++VR IG R ++ ++ AE +T NT L L IA +
Sbjct: 61 LMKLFLGALDREVDELHRRGVRVRFIGERERFGAGLVSRMQLAEQRTADNTTLTLSIAAS 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I+RA + + ++ +G + +D SL+ + +D+P PDL IRTGG+ R+S+F
Sbjct: 121 YGGRQDIARAARALAVEVAAGRLLPEQIDESLLGSQVALADLPTPDLFIRTGGDTRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
LLWQ+AY+E F WPDF EL AL+ Y R+RRFG S +
Sbjct: 181 LLWQLAYTELWFTEALWPDFDAELLQQALDAYASRERRFGLTSAQ 225
>gi|148239867|ref|YP_001225254.1| undecaprenyl pyrophosphate synthetase [Synechococcus sp. WH 7803]
gi|147848406|emb|CAK23957.1| Undecaprenyl pyrophosphate synthetase [Synechococcus sp. WH 7803]
Length = 265
Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 136/232 (58%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P HI +IMDGNGRWA ARGLPR GHR G+E + + GI LT +AFS N
Sbjct: 24 SKLPGHIAVIMDGNGRWANARGLPRVMGHRAGVEALKTTLRLCNDWGIGALTAYAFSTEN 83
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP E++ L+ L + L++ +L+ +++R +G+ +L + ++ +A ++T N
Sbjct: 84 WSRPGEEVNFLMTLFERVLQRELNALESEQVRIRFLGDLEALPPRLQALIADATERTASN 143
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
G++ + NY R E+ RA + + + + SG + +D + +A L T DPDL+IR
Sbjct: 144 RGIHFNVCTNYGGRRELVRASRRLAERVASGELQPSQIDENALAAELYTVGERDPDLLIR 203
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
T GE+R+S+FLLWQ+AY+E WPDF + AL Y R RRFGGL
Sbjct: 204 TSGEQRISNFLLWQLAYAEIHVTEVCWPDFGADALLSALTDYQSRRRRFGGL 255
>gi|116491009|ref|YP_810553.1| undecaprenyl pyrophosphate synthetase [Oenococcus oeni PSU-1]
gi|116091734|gb|ABJ56888.1| Undecaprenyl pyrophosphate synthetase [Oenococcus oeni PSU-1]
Length = 254
Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 103/232 (44%), Positives = 135/232 (58%), Gaps = 3/232 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA + R GH+ G++ I AA +G+K LT+FAFS NW R
Sbjct: 20 PEHVAIIMDGNGRWAKRQHKSRIFGHKAGMQNVETIALAANNLGVKVLTLFAFSTENWGR 79
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+KL F L +NNIKV IG L + A + T+ NTGL
Sbjct: 80 PQDEVNYLMKLPIDFFNTFVPELIENNIKVEGIGEIDDLPEKTRQAFLNAVEDTKDNTGL 139
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD---PDLIIR 187
L A NY R EI A K+I + G + + D+D L L T+ + + PDLIIR
Sbjct: 140 ILNFAINYGGRTEIVDATKSIVNQVLQGKIKTEDIDEKLFQNNLLTNTLAEKANPDLIIR 199
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
T GE+R+S+FLLWQ AYSEF F P+ WPD++ E AL Y+ RDRRFG +
Sbjct: 200 TSGEQRISNFLLWQSAYSEFYFSPKLWPDYTAEDLEEALAAYSNRDRRFGKI 251
>gi|313891924|ref|ZP_07825525.1| di-trans,poly-cis-decaprenylcistransferase [Dialister
microaerophilus UPII 345-E]
gi|313119567|gb|EFR42758.1| di-trans,poly-cis-decaprenylcistransferase [Dialister
microaerophilus UPII 345-E]
Length = 240
Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 96/229 (41%), Positives = 136/229 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ II+DGNGRW G R GH+ G +IV AA +GIK LT++AFS NW+R
Sbjct: 8 PQHVAIILDGNGRWGKKHGRERTYGHKFGAANVKKIVRFAASLGIKKLTLYAFSTENWKR 67
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L K +L + L ++N++V V+G+ L + +K E+ T+ N GL
Sbjct: 68 PKLEVKFLMTLFKEYLIEQLRELTEDNVQVHVVGDVSKLSKSLQEEIKSCENDTKNNDGL 127
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R E+ A + I D+++G + ++D I L SD D DL+IRTGG
Sbjct: 128 ILNIAINYGGRQELVHAFRKIASDVKAGILNPSEIDEENIKDALYASDADDVDLLIRTGG 187
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+R+S+FLLWQ++YSE F WPDF +A+ + R+RRFGGL
Sbjct: 188 EQRISNFLLWQISYSELYFTSVLWPDFDERELENAIKWFVNRNRRFGGL 236
>gi|77919513|ref|YP_357328.1| undecaprenyl diphosphate synthase [Pelobacter carbinolicus DSM
2380]
gi|77545596|gb|ABA89158.1| Undecaprenyl pyrophosphate synthetase [Pelobacter carbinolicus DSM
2380]
Length = 251
Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 92/227 (40%), Positives = 135/227 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RGLPR GH G+E I+ + +G+ LT++AFS NW R
Sbjct: 13 PRHLAIIMDGNGRWAEQRGLPRILGHHHGVETAKVIIEESRRLGLSYLTLYAFSSENWGR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L+ +FL++ +L + I++ VIG L + + L ++T N +
Sbjct: 73 PEEEVDSLMSLLNTFLERELETLLTHRIRLNVIGAIHRLPEAVQHTLIGTMERTANNRDM 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y +RDEI A+K I ++ G + VD + +L T+ +PDPD +IRT G
Sbjct: 133 VLTLALSYGARDEILGAVKAIAGEVAVGRLGLDAVDEECFSGFLQTAGMPDPDFLIRTSG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+FLLWQ+AY+E F P WPDFS A +++ R RR+G
Sbjct: 193 EIRISNFLLWQLAYAEIYFTPVLWPDFSPTHLHEAFTEFSRRQRRYG 239
>gi|307546390|ref|YP_003898869.1| undecaprenyl diphosphate synthase [Halomonas elongata DSM 2581]
gi|307218414|emb|CBV43684.1| undecaprenyl diphosphate synthase [Halomonas elongata DSM 2581]
Length = 277
Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/227 (42%), Positives = 132/227 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGN RWA A GL GH G+E ++ AAE GI LT+FAFS NW+R
Sbjct: 40 PRHVAIIMDGNNRWAKAHGLSGVRGHHAGVEAVRAVIRRAAERGIGTLTLFAFSSENWKR 99
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L++L LK+ L +++I++ V+G R I ++ AE T NTGL
Sbjct: 100 PAAEVHALMELFLMALKREVKKLHEHDIRLSVVGEREGFSSTIQKHIEAAESLTAGNTGL 159
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L IA NY R +I++A + + + + +G + +D + L D P DL IRT G
Sbjct: 160 HLVIAANYGGRWDIAQAARRLGERVGAGELDPASIDERAVQSELCLGDAPPVDLCIRTSG 219
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+FLLWQ+AY+E F P WPDF E F AL + R RRFG
Sbjct: 220 ECRISNFLLWQMAYAELYFTPVLWPDFGAEAFDEALVDFAGRQRRFG 266
>gi|260554745|ref|ZP_05826966.1| di-trans,poly-cis-decaprenylcistransferase [Acinetobacter baumannii
ATCC 19606]
gi|332873907|ref|ZP_08441847.1| di-trans,poly-cis-decaprenylcistransferase [Acinetobacter baumannii
6014059]
gi|193077566|gb|ABO12400.2| undecaprenyl pyrophosphate synthetase [Acinetobacter baumannii ATCC
17978]
gi|260411287|gb|EEX04584.1| di-trans,poly-cis-decaprenylcistransferase [Acinetobacter baumannii
ATCC 19606]
gi|322508740|gb|ADX04194.1| ispU [Acinetobacter baumannii 1656-2]
gi|323518345|gb|ADX92726.1| undecaprenyl diphosphate synthase [Acinetobacter baumannii
TCDC-AB0715]
gi|332737893|gb|EGJ68780.1| di-trans,poly-cis-decaprenylcistransferase [Acinetobacter baumannii
6014059]
Length = 250
Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 143/232 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGN R+A + + GHR+G V + IV + G++ LT+FAFS NW R
Sbjct: 10 PQHVAIIMDGNNRFAKKNQMQKGDGHREGKNVLDPIVEHCVKTGVRALTVFAFSSENWNR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL++ + + +KK NI +R IG+R L ++ ++++AE QT + +
Sbjct: 70 PQYEVDLLMKLLEETIHEQIPRMKKFNIALRFIGDRSRLPSHLVALMEDAEQQTAHHDAM 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA +Y +I+ A K + Q + G + + ++ L KY+ +D+P DL+IRTGG
Sbjct: 130 TLTIAVSYGGMWDIANAAKQVAQAVSRGEIDADQINVDLFEKYVSLNDLPAVDLLIRTGG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+ R+S+FLLWQ AY+E F WP+F+ E F HALN ++ R+RRFG S++
Sbjct: 190 DFRISNFLLWQAAYAELYFTDTLWPEFTVEEFDHALNVFSGRERRFGKTSEQ 241
>gi|219681606|ref|YP_002467992.1| undecaprenyl pyrophosphate synthetase [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|219682163|ref|YP_002468547.1| undecaprenyl pyrophosphate synthetase [Buchnera aphidicola str.
Tuc7 (Acyrthosiphon pisum)]
gi|257471292|ref|ZP_05635291.1| undecaprenyl pyrophosphate synthetase [Buchnera aphidicola str.
LSR1 (Acyrthosiphon pisum)]
gi|219621896|gb|ACL30052.1| undecaprenyl pyrophosphate synthetase [Buchnera aphidicola str.
Tuc7 (Acyrthosiphon pisum)]
gi|219624449|gb|ACL30604.1| undecaprenyl pyrophosphate synthetase [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|311085977|gb|ADP66059.1| undecaprenyl pyrophosphate synthetase [Buchnera aphidicola str.
LL01 (Acyrthosiphon pisum)]
gi|311086551|gb|ADP66632.1| undecaprenyl pyrophosphate synthetase [Buchnera aphidicola str.
TLW03 (Acyrthosiphon pisum)]
gi|311087132|gb|ADP67212.1| undecaprenyl pyrophosphate synthetase [Buchnera aphidicola str.
JF99 (Acyrthosiphon pisum)]
gi|311087670|gb|ADP67749.1| undecaprenyl pyrophosphate synthetase [Buchnera aphidicola str.
JF98 (Acyrthosiphon pisum)]
Length = 251
Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 99/231 (42%), Positives = 141/231 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R GH++G E + + +K LT++AFS NW R
Sbjct: 18 PCHVAIIMDGNGRWATRQGKIRIMGHKEGFRAVKEAIKFSIANNLKILTLYAFSSENWNR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P+ EI L++L L +LKK+NI+ +VIG+ D + + AE T NTGL
Sbjct: 78 PLFEIKALMELFLFALDTEIKNLKKHNIRFKVIGDITCFDKKLQNSIHYAEQITFDNTGL 137
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I ++K I ++ G + + + + I++YL TS++ DL+IRTGG
Sbjct: 138 ILNIAANYGGRWDIIESVKKIINRVQRGILDVNKIQENTISQYLSTSELLPVDLVIRTGG 197
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
EKR+S+FLLWQ+AYSE F WPDF+ +F HA++ + R+RRFGG K
Sbjct: 198 EKRISNFLLWQIAYSELYFTDVLWPDFNCHIFQHAIDSFVSRERRFGGFKK 248
>gi|297745904|emb|CBI15960.3| unnamed protein product [Vitis vinifera]
Length = 233
Score = 192 bits (487), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 142/230 (61%), Gaps = 2/230 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ +IMDGN RWA RGLP +GH+ G+ E+V + GIK L++FAFS +NW R
Sbjct: 2 PEHVAVIMDGNVRWAQKRGLPAASGHQAGVRSLRELVGLCCKWGIKVLSVFAFSYDNWSR 61
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ LI+ +K + + I+V VIG+ L + + ++ + E+ T+ N+ L
Sbjct: 62 SEGEVGFLMSLIERVVKAELPNFGREGIRVSVIGDLSKLPEQLQKLIIDVEETTKENSRL 121
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT--SDVPDPDLIIRT 188
+A +YS + +I +A KNI ++ G + D++ SLI + L T ++ P PDL+IRT
Sbjct: 122 QFIVALSYSGQCDILQACKNIGYKVKDGLIEPEDINKSLIEQELQTNCTEFPFPDLLIRT 181
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GE R+S+F+LWQ+AY+E F WPDF ++ F AL+ + R RR+GG
Sbjct: 182 SGELRVSNFMLWQIAYTELCFFSTLWPDFGKDEFVEALSSFQKRQRRYGG 231
>gi|37519677|ref|NP_923054.1| undecaprenyl pyrophosphate synthetase [Gloeobacter violaceus PCC
7421]
gi|42559749|sp|Q7NPE7|UPPS_GLOVI RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|35210668|dbj|BAC88049.1| undecaprenyl pyrophosphate synthetase [Gloeobacter violaceus PCC
7421]
Length = 249
Score = 192 bits (487), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 88/227 (38%), Positives = 127/227 (55%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IMDGNGRWA+ R LPR GH+ G+ E++ + GI LT++AFS NW+R
Sbjct: 21 PRHVAAIMDGNGRWASKRNLPRVMGHQAGVSALKELLRCCKDWGIGALTVYAFSTENWKR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L + L + +++R +G L + ++ A T NT +
Sbjct: 81 PQYEVEFLMALFEKVLNHELSEMVDEGVRIRFVGALAHLPGALQSAIEGAMAATEANTAV 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY R EI A + + + + SG + +D L A++L T ++ DPDL+IRT G
Sbjct: 141 EFTVATNYGGRQEIVNACRELAEQVRSGRLLPEQIDEKLFAQHLYTRELSDPDLLIRTSG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+RLS++LLWQ+AY+E WPDF R F AL Y R RRFG
Sbjct: 201 EQRLSNYLLWQMAYTEIYVADVLWPDFDRAAFHAALQSYQGRQRRFG 247
>gi|134094564|ref|YP_001099639.1| undecaprenyl pyrophosphate synthetase [Herminiimonas
arsenicoxydans]
gi|133738467|emb|CAL61512.1| Undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans,poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS) [Herminiimonas
arsenicoxydans]
Length = 254
Score = 192 bits (487), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 94/232 (40%), Positives = 137/232 (59%), Gaps = 4/232 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R +PR AGH KG+E IV A A+ G++ +T FAFS NWRR
Sbjct: 17 PRHIAIIMDGNGRWATKRFMPRVAGHVKGVEAVRGIVEACAKQGVEYVTFFAFSSENWRR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L + L++ + N I+++++G+ DD + ++ AE +T N L
Sbjct: 77 PDDEVSLLMRLFMTALEREVSKMHANGIRLKIVGDLSRFDDKLQKMIASAERKTAANDRL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ I NY R +I +A+ + + + D + +L + P+PDL IRTGG
Sbjct: 137 TVTICANYGGRWDIMQAVNK----MAAAYPDAGDFSEEQLTPFLSLAYAPEPDLFIRTGG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FLLWQ+AY+E F YWPDF A++ Y R+RRFG S +
Sbjct: 193 EERISNFLLWQLAYTELYFTDTYWPDFDAAALELAISSYQQRERRFGRTSAQ 244
>gi|227890627|ref|ZP_04008432.1| di-trans-poly-cis-decaprenylcistransferase [Lactobacillus
salivarius ATCC 11741]
gi|301300278|ref|ZP_07206487.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus
salivarius ACS-116-V-Col5a]
gi|227867565|gb|EEJ74986.1| di-trans-poly-cis-decaprenylcistransferase [Lactobacillus
salivarius ATCC 11741]
gi|300214369|gb|ADJ78785.1| Undecaprenyl pyrophosphate synthetase [Lactobacillus salivarius
CECT 5713]
gi|300852119|gb|EFK79794.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus
salivarius ACS-116-V-Col5a]
Length = 260
Score = 192 bits (487), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 101/237 (42%), Positives = 141/237 (59%), Gaps = 7/237 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R LPR AGH++G+E I A+ +G+K LT++AFS NW+R
Sbjct: 24 PNHIAIIMDGNGRWAKKRHLPRIAGHKQGMETVKNITKVASNLGVKVLTLYAFSTENWKR 83
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L F L +NN++V V+G L + +A +QT TG+
Sbjct: 84 PDKEVDFLMDLPVKFFNTFVPELIENNVRVNVMGYIDMLPKKTQKAVYDAIEQTSNCTGM 143
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDI-----ESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
L A NY R E+ AI++I ++ E + VD++L+ L + DPDL+
Sbjct: 144 ILNFALNYGGRAELVSAIQSIASEVSENKLEIEKITEKVVDANLMTGKL--APYNDPDLL 201
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRT GE+R+S+FLLWQ+AYSEFVF WPD+S E + + RDRRFGGL ++
Sbjct: 202 IRTSGEERISNFLLWQLAYSEFVFTDTLWPDYSEEDLLANIYTFQTRDRRFGGLKEE 258
>gi|187251115|ref|YP_001875597.1| undecaprenyl diphosphate synthase [Elusimicrobium minutum Pei191]
gi|186971275|gb|ACC98260.1| Undecaprenyl diphosphate synthase [Elusimicrobium minutum Pei191]
Length = 228
Score = 192 bits (487), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/234 (41%), Positives = 135/234 (57%), Gaps = 6/234 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M P HI IMDGNGRWA + +PR GH G + +++ A E+G+K +T+FAFS
Sbjct: 1 MDKKIPLHIAFIMDGNGRWAKNKNMPRNYGHEAGAKTVEKVIKKARELGVKYITLFAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP EI L+KL+ L + KKNN ++ + G R L ++IL + + T+
Sbjct: 61 ENWSRPQREIDSLMKLLSKTLARYNKDSKKNNTRLIISGRREKLPENILKDIDNVVESTK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
NT + + +A NY +R EI+ AIK + S ++ I+ + +PDPDLI
Sbjct: 121 NNTAITVNLALNYGARQEITDAIKKLV------SQGKKEITEQDISACMYQPGIPDPDLI 174
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRT GEKR+S+FLLWQ AYSEF F P WPDF A+ ++ R RR+GG+
Sbjct: 175 IRTSGEKRISNFLLWQSAYSEFYFTPVLWPDFDGAELEKAVTEFQARIRRYGGI 228
>gi|194365039|ref|YP_002027649.1| undecaprenyl pyrophosphate synthase [Stenotrophomonas maltophilia
R551-3]
gi|194347843|gb|ACF50966.1| undecaprenyl diphosphate synthase [Stenotrophomonas maltophilia
R551-3]
Length = 255
Score = 192 bits (487), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 97/230 (42%), Positives = 134/230 (58%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
HI IIMDGNGRWA R PR GHR G N + E+GI LT+FAFS NW RP
Sbjct: 15 HIAIIMDGNGRWAQQRRRPRVIGHRAGARAVNRTIERCLELGIPALTLFAFSSENWGRPQ 74
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+ L+KL L + L + ++VR IG R ++ ++ AE +T NT L L
Sbjct: 75 EEVDALMKLFLGALDREVDELHRRGVRVRFIGERERFGAGLVSRMQLAEQRTADNTTLTL 134
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA +Y R +I+RA + + ++ +G + +D SL+ + + +D+P PDL IRTGG+
Sbjct: 135 SIAASYGGRQDIARAARELAAEVAAGRLLPEQIDESLLGRQVALADLPPPDLFIRTGGDT 194
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
R+S+FLLWQ+AY+E F WPDF L AL+ Y R+RRFG S +
Sbjct: 195 RISNFLLWQLAYTELWFTEALWPDFDAALLQQALDAYGSRERRFGLTSAQ 244
>gi|239501623|ref|ZP_04660933.1| di-trans,poly-cis-decaprenylcistransferase [Acinetobacter baumannii
AB900]
Length = 250
Score = 192 bits (487), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 143/232 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGN R+A + + GHR+G V + IV + G++ LT+FAFS NW R
Sbjct: 10 PQHVAIIMDGNNRFAKKNQMQKGDGHREGKNVLDPIVEHCVKTGVRALTVFAFSSENWNR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL++ + + +KK NI +R IG+R L ++ ++++AE QT + +
Sbjct: 70 PQYEVDLLMKLLEETIHEQIPRMKKFNIALRFIGDRSRLPSHLVTLMEDAEQQTAHHDAM 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA +Y +I+ A K + Q + G + + ++ L KY+ +D+P DL+IRTGG
Sbjct: 130 TLTIAVSYGGMWDIANAAKQVAQAVSCGEIDADQINVDLFEKYVSLNDLPAVDLLIRTGG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+ R+S+FLLWQ AY+E F WP+F+ E F HALN ++ R+RRFG S++
Sbjct: 190 DFRISNFLLWQAAYAELYFTDTLWPEFTVEEFDHALNVFSGRERRFGKTSEQ 241
>gi|15616852|ref|NP_240065.1| undecaprenyl pyrophosphate synthetase [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|11135212|sp|P57330|UPPS_BUCAI RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|25314041|pir||G84957 di-trans,poly-cis-decaprenylcistransferase (EC 2.5.1.31) [imported]
- Buchnera sp. (strain APS)
gi|10038916|dbj|BAB12951.1| undecaprenyl pyrophosphate synthetase [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
Length = 251
Score = 192 bits (487), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 99/231 (42%), Positives = 141/231 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R GH++G E + + +K LT++AFS NW R
Sbjct: 18 PCHVAIIMDGNGRWATRQGKIRIMGHKEGFRAVKEAIKFSIANNLKILTLYAFSSENWNR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P+ EI L++L L +LKK+NI+ +VIG+ D + + AE T NTGL
Sbjct: 78 PLFEIKALMELFLFALDTEIKNLKKHNIRFKVIGDITCFDKKLQNSIHYAEQITFDNTGL 137
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I ++K I ++ G + + + + I++YL TS++ DL+IRTGG
Sbjct: 138 ILNIAANYGGRWDIIESVKKIINRVQRGILDVNKIHENTISQYLSTSELLPVDLVIRTGG 197
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
EKR+S+FLLWQ+AYSE F WPDF+ +F HA++ + R+RRFGG K
Sbjct: 198 EKRISNFLLWQIAYSELYFTDVLWPDFNCHIFQHAIDSFVSRERRFGGFKK 248
>gi|116073041|ref|ZP_01470303.1| undecaprenyl diphosphate synthase [Synechococcus sp. RS9916]
gi|116068346|gb|EAU74098.1| undecaprenyl diphosphate synthase [Synechococcus sp. RS9916]
Length = 265
Score = 192 bits (487), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 91/229 (39%), Positives = 138/229 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA ARGLPR GHR G+E + ++ G+K LT +AFS NW R
Sbjct: 27 PAHVAVIMDGNGRWAQARGLPRVMGHRAGVEALKATLRLCSDWGVKALTAYAFSTENWSR 86
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L + L++ +L+ +++R +G+ +L + + ++ +A +T NTG+
Sbjct: 87 PGDEVNFLMTLFERVLQRELQALEAEQVRIRFLGDLDALPEKLQALIADATARTANNTGI 146
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ + NY R E+ A + + G + +D + +A L T+ DPDL+IRT G
Sbjct: 147 HFNVCTNYGGRRELVLAAQALATRAARGELEPSSIDENTLAAELFTAGEQDPDLLIRTSG 206
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+R+S+FLLWQ+AY+E +WPDF+RE AL Y R RRFGGL
Sbjct: 207 ERRISNFLLWQLAYAEIHVTDVFWPDFNREALLEALLDYQGRRRRFGGL 255
>gi|218283541|ref|ZP_03489531.1| hypothetical protein EUBIFOR_02121 [Eubacterium biforme DSM 3989]
gi|218215809|gb|EEC89347.1| hypothetical protein EUBIFOR_02121 [Eubacterium biforme DSM 3989]
Length = 246
Score = 192 bits (487), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 99/230 (43%), Positives = 136/230 (59%), Gaps = 3/230 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P + IIMDGNGRWA RGLPR AGH+KG + + AA ++GI+ L ++AFS NW+R
Sbjct: 19 PKTVAIIMDGNGRWAKQRGLPRTAGHKKGADTIRTVALAAQDMGIQKLILYAFSTENWKR 78
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L KL F K L + NI+V G V+ +A + T NTGL
Sbjct: 79 PEDEVSYLCKLPGLFFNKFINELMEKNIQVTFAGELEKFPKATQDVINKAVNMTSKNTGL 138
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY SR E+ +IK ++ SG +D+ +KYL + D DL+IRT G
Sbjct: 139 ELCLAINYGSRREMLLSIKKYADEVASGKR-ENDLTEEEFSKYLFVPE--DIDLMIRTSG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E R+S++LLWQ+AY+E +F P WPDF + L+++ RDRRFGGL+
Sbjct: 196 ELRISNYLLWQLAYAELIFTPVAWPDFDEKALKDCLDEFASRDRRFGGLT 245
>gi|145636947|ref|ZP_01792611.1| hypothetical protein CGSHiHH_04575 [Haemophilus influenzae PittHH]
gi|145269805|gb|EDK09744.1| hypothetical protein CGSHiHH_04575 [Haemophilus influenzae PittHH]
Length = 239
Score = 192 bits (487), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 95/228 (41%), Positives = 136/228 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA + R GH G+ + VA A ++G++ LT++AFS NW R
Sbjct: 10 PKHVAIIMDGNGRWAKQKNKMRIFGHTNGVTAVRKAVAYARQIGVEVLTLYAFSSENWSR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EIS L+ L L + L KNNI +++IG+ + + +K+AE+ T NT L
Sbjct: 70 PEQEISALMSLFMQALDREVKKLHKNNICLKIIGDVSRFSETLQEKIKKAENLTEKNTAL 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I +A K I + ++ + D+++S +L T + P DL+IRT G
Sbjct: 130 TLNIAANYGGRWDIIQAAKQIAEKVKKEEMSVSDINNSTFQHHLATQNAPPVDLLIRTSG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R+S+FLLWQ+AY+E F WPDF++ F A+ Y R RRFGG
Sbjct: 190 EQRISNFLLWQIAYAELYFSDVLWPDFNQLEFNRAIASYQQRHRRFGG 237
>gi|86607493|ref|YP_476256.1| undecaprenyl diphosphate synthase [Synechococcus sp. JA-3-3Ab]
gi|86556035|gb|ABD00993.1| undecaprenyl diphosphate synthase [Synechococcus sp. JA-3-3Ab]
Length = 248
Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 88/227 (38%), Positives = 134/227 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ ++MDGNGRWA RGLPR GH++G+ E++ + GI LT +AFS NW R
Sbjct: 21 PRHVAVVMDGNGRWAQKRGLPRSVGHQRGVAALKELLRCCHDWGIPLLTAYAFSTENWGR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ L + L + + + ++++ G +L + + A ++T+ N G+
Sbjct: 81 AREEVDFLMTLFEQVLWQELAEMVQQGVRIQFAGQLSALPRSLQDTILHAVERTQHNEGI 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY R EI +A ++I ++ G + +D +L +++L T+ + DPDL+IRT G
Sbjct: 141 CLTVALNYGGRQEIVQACRSIATLVQQGLLQPDQIDEALFSQFLYTTGLSDPDLLIRTSG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+FLLWQ+AY+E F P WPDF R F AL Y R RRFG
Sbjct: 201 EMRISNFLLWQMAYTEQYFTPILWPDFDRAAFHQALLSYQSRQRRFG 247
>gi|88808909|ref|ZP_01124418.1| Undecaprenyl pyrophosphate synthetase (UPPS) [Synechococcus sp. WH
7805]
gi|88786851|gb|EAR18009.1| Undecaprenyl pyrophosphate synthetase (UPPS) [Synechococcus sp. WH
7805]
Length = 265
Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 139/232 (59%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P H+ +IMDGNGRWA ARGLPR GHR G+E + +++GI+ LT +AFS N
Sbjct: 24 SKLPGHLAVIMDGNGRWAKARGLPRVMGHRAGVEALKSTLRLCSDLGIRALTAYAFSTEN 83
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP E++ L+ L + L++ ++L+ +++R +G+ L + ++ +A +T N
Sbjct: 84 WSRPGEEVNFLMTLFERVLQRELHALESEQVRIRFLGDLEDLPLRLQTLIADAMRRTADN 143
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
G++ + NY R E+ RA + + + + G + +D + +A L T DPDL+IR
Sbjct: 144 RGIHFNVCTNYGGRRELVRASRRLAERVALGELEVSQIDENTLAAELYTVGELDPDLLIR 203
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
T GE+R+S+FLLWQ+AY+E +WPDF + F AL Y R RRFGGL
Sbjct: 204 TSGERRISNFLLWQLAYAEIHVTDVFWPDFGADALFSALLDYQSRCRRFGGL 255
>gi|317121845|ref|YP_004101848.1| undecaprenyl diphosphate synthase [Thermaerobacter marianensis DSM
12885]
gi|315591825|gb|ADU51121.1| undecaprenyl diphosphate synthase [Thermaerobacter marianensis DSM
12885]
Length = 377
Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 94/226 (41%), Positives = 137/226 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG PR AGHR G++ EIV A ++G++ LT++AFS NWRR
Sbjct: 55 PRHVAIIMDGNGRWAQRRGWPRVAGHRAGVQSVREIVRFAGDIGLEVLTLYAFSTENWRR 114
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L+ L+ +++ L +N +++RVIG+ L + A + TR N +
Sbjct: 115 PPAEVRALMGLLVEHIRRDLDELHRNGVQIRVIGDPEGLPPLPRREVLRAVETTRHNRRM 174
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY +R E++RA + + G + +D +++ L T+ +PDPDL+IR G
Sbjct: 175 ILVLALNYGARWELARAARQLAARAARGELDPEAIDEAMLGSQLQTAGLPDPDLLIRPSG 234
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
E R+S+FLLWQ+AYSE F P WPDF A+ Y R+RRF
Sbjct: 235 EWRISNFLLWQIAYSELWFTPVAWPDFRPVHLVEAIEDYARRERRF 280
>gi|262166333|ref|ZP_06034070.1| undecaprenyl pyrophosphate synthetase [Vibrio mimicus VM223]
gi|262026049|gb|EEY44717.1| undecaprenyl pyrophosphate synthetase [Vibrio mimicus VM223]
Length = 232
Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 86/220 (39%), Positives = 139/220 (63%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA A+G PR GH+ G+ + ++ +A +GIK +T+FAFS NWRRP E+
Sbjct: 1 MDGNGRWAKAQGKPRVFGHKNGVAAVRKTISTSARLGIKAVTLFAFSSENWRRPEEEVGV 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L + L L KNN+++RVIG++ + + + +AE T NTG+ + IA N
Sbjct: 61 LMELFITVLSTEIKKLHKNNLRLRVIGDKSRFSERLQSKIAQAEALTASNTGMVVNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y + +I +A + + + + G + ++D ++I ++L +D+P+ DL+IRT GE R+S+F
Sbjct: 121 YGGKWDILQATQALAEKVAQGDLLPAEIDEAMIKQHLTMADLPEVDLLIRTSGECRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+LWQ+AY+E F P +WP+F A+ + R+RRFG
Sbjct: 181 MLWQLAYAEMYFTPVFWPEFDENCLIEAVTWFVNRERRFG 220
>gi|331698244|ref|YP_004334483.1| Undecaprenyl pyrophosphate synthase [Pseudonocardia dioxanivorans
CB1190]
gi|326952933|gb|AEA26630.1| Undecaprenyl pyrophosphate synthase [Pseudonocardia dioxanivorans
CB1190]
Length = 261
Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 91/228 (39%), Positives = 137/228 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ ++MDGNGRWA ARGLPR GHR+G ++ ++G+K L+ +AFS NW+R
Sbjct: 24 PNHVALVMDGNGRWANARGLPRIEGHRRGEASLMDVARGCIDIGVKWLSAYAFSTENWKR 83
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ + ++VR G R L ++ L+ AE++TR N L
Sbjct: 84 SPDEVRFLMGFNRDVIRRRVDEMHAMGVRVRWAGRRPRLWRSVIRELEVAEEKTRHNDVL 143
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R EI+ A++ I + + G + +D IA+YLD D+PD DL +R+ G
Sbjct: 144 TLTMCVNYGGRAEIADAVRQIARLVAEGRLKPDKIDERTIARYLDEPDMPDVDLFVRSSG 203
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S+FLLWQ AY+E VF+ +PDF R + A+ Y RDRRFGG
Sbjct: 204 EQRTSNFLLWQSAYAEMVFLDTLFPDFDRRHIWEAIEIYARRDRRFGG 251
>gi|33152302|ref|NP_873655.1| UPP synthase [Haemophilus ducreyi 35000HP]
gi|42559770|sp|Q7VM20|UPPS_HAEDU RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|33148525|gb|AAP96044.1| undecaprenyl pyrophosphate synthetase [Haemophilus ducreyi 35000HP]
Length = 242
Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 95/231 (41%), Positives = 136/231 (58%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S+ P H+ IIMDGNGRWA +G R GH+ G+ V AA+ GIK LT++AFS N
Sbjct: 10 SNMPQHVAIIMDGNGRWAKKQGKLRVFGHQNGVNAVRAAVHFAAKYGIKVLTLYAFSSEN 69
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP +E+S L+ L L L K+NI++ ++G++ D + + E+E T N
Sbjct: 70 WNRPATEVSALMSLFIQALNTEVSKLHKHNIRLNILGDKTRFSDSLQKRIIESETLTAHN 129
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T L L IA NY S +I+ A K + + ++ G + D+ + + L T++ P DL+IR
Sbjct: 130 TRLTLNIAANYGSHWDITEATKKLAEKVKLGKISVTDITPEKVQRALVTAEQPPVDLLIR 189
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
T GE+R+S+FLLWQ+AY+E F WPDF F A+ Y R+RRFGG
Sbjct: 190 TSGEQRISNFLLWQIAYAELFFSDVLWPDFDETSFSEAIYAYQQRERRFGG 240
>gi|315499833|ref|YP_004088636.1| undecaprenyl diphosphate synthase [Asticcacaulis excentricus CB 48]
gi|315417845|gb|ADU14485.1| undecaprenyl diphosphate synthase [Asticcacaulis excentricus CB 48]
Length = 252
Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 91/217 (41%), Positives = 134/217 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA AR R GH+ G+E + + AA +G+ +LT+FAFS NWRR
Sbjct: 16 PLHVAIIMDGNGRWAKARRQIRTFGHKAGVEALRKTITAAPHLGVTHLTVFAFSTENWRR 75
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+S+L+ L+K+F++ L ++ + VR+IG+R L DI + EA +T+ N+
Sbjct: 76 PATEVSDLMGLLKAFIRSDMDRLARDGVCVRIIGDRAGLPVDIRECVDEAHQRTQHNSRF 135
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY ++ +I A K + +++G D+ + L TS +P DL+IRT G
Sbjct: 136 FLQVALNYGAQADILEAAKTFARQVKAGEAALEDLTAERFGGLLSTSGLPPLDLLIRTSG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALN 227
E RLS+FLLW+ AY+EFVF WPD+ E AL+
Sbjct: 196 EHRLSNFLLWEAAYAEFVFQDVLWPDYDGEALKAALD 232
>gi|78356173|ref|YP_387622.1| undecaprenyl pyrophosphate synthetase [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
gi|78218578|gb|ABB37927.1| Undecaprenyl pyrophosphate synthetase [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
Length = 243
Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 133/229 (58%), Gaps = 4/229 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P HI IIMDGNGRWA ARGL R GH+ G +V E+GI +LT++AFS NW
Sbjct: 11 SLPAHIAIIMDGNGRWATARGLSRSEGHKAGSRAVRTVVTRCRELGISHLTLYAFSQENW 70
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+ L L+ SFL+ ++++ NI++ V G+ +L L A +T NT
Sbjct: 71 GRPKKEVGFLFDLLVSFLRDELPAMERENIRLSVFGDISALPMAARKALDHAMARTARNT 130
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
L+L +A NYS R +I +A + + + DV L + +L T+ PDPDL+IRT
Sbjct: 131 ALHLNLALNYSGRADIVQACRRLM----AAGTSEQDVTEELFSSFLWTAGQPDPDLVIRT 186
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
GE RLS+FLL+Q AYSE F WPDF E AL+ Y +R RRFG
Sbjct: 187 SGEIRLSNFLLYQSAYSELYFTDIAWPDFGSEQLDEALHAYAMRSRRFG 235
>gi|169628766|ref|YP_001702415.1| undecaprenyl pyrophosphate synthetase [Mycobacterium abscessus ATCC
19977]
gi|169240733|emb|CAM61761.1| Probable undecaprenyl pyrophosphate synthetase [Mycobacterium
abscessus]
Length = 302
Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 132/227 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ ++MDGNGRWA ARGLPR GH+ G ++V A E+GI LT +AFS NWRR
Sbjct: 74 PRHVAVVMDGNGRWARARGLPRTEGHKMGEATMMDMVCGAIEMGIPWLTTYAFSTENWRR 133
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ + +K+ + L ++ R G + L + L+ E+ T+ N+ L
Sbjct: 134 PADEVRFLMGFNRDVVKRRRHDLNNMGVRFRWAGQKTRLWSSVYKELEITEELTKNNSTL 193
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L NY R EI+ A + I + +ESG + + IAKYLD D+PD DL +R G
Sbjct: 194 TLTTCINYGGRAEIAEATRRIARLVESGQLKPDRITEETIAKYLDEPDMPDVDLFLRPSG 253
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R S+F++WQ AY+EFVF + +PDF R + A +Y RDRRFG
Sbjct: 254 EFRSSNFMMWQSAYAEFVFQEKMYPDFDRRDLWAACLEYAQRDRRFG 300
>gi|71899405|ref|ZP_00681564.1| Di-trans-poly-cis-decaprenylcistransferase [Xylella fastidiosa
Ann-1]
gi|71730814|gb|EAO32886.1| Di-trans-poly-cis-decaprenylcistransferase [Xylella fastidiosa
Ann-1]
Length = 255
Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 92/227 (40%), Positives = 134/227 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R PR AGHR G++ V E GIK LT+FAFS NW R
Sbjct: 13 PRHIAIIMDGNGRWAERRSQPRTAGHRAGVKAAMRTVDFCLEKGIKMLTLFAFSSENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+++ +G L + ++VR IG R D ++ + +AE T N L
Sbjct: 73 PADEVNFLMEMSIKLFGRGIEELHRRGVQVRFIGERKRFDIALVEHMTKAEHLTANNQRL 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y R +I+ A + + QD+ +G + +D L+ +++ +D+P PD+ IRT G
Sbjct: 133 ILSLAVSYGGRQDITMAARALAQDVAAGRLKPEQIDEDLLGQHMSLADLPPPDMFIRTSG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
R+S+FLLWQ+AY+E F WP+F+ + AL+ Y R+RRFG
Sbjct: 193 VIRISNFLLWQIAYTELWFTDVMWPEFNSTVLQQALDDYASRERRFG 239
>gi|227499274|ref|ZP_03929386.1| Di-trans,poly-cis-decaprenylcistransferase [Anaerococcus tetradius
ATCC 35098]
gi|227218625|gb|EEI83859.1| Di-trans,poly-cis-decaprenylcistransferase [Anaerococcus tetradius
ATCC 35098]
Length = 232
Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 94/230 (40%), Positives = 136/230 (59%), Gaps = 4/230 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I++DGNGRWA R +PR GH+ G + +I A E G+K L+++AFS NW+R
Sbjct: 7 PTHVAIVLDGNGRWAKKRFMPRTYGHKNGADRVVDICLYAKECGVKYLSLYAFSTENWKR 66
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+KL+ F+ L + N K+ IG+ L + + +A + TR N +
Sbjct: 67 PDDEVNYLMKLVIKFINSKLDILMRENCKLNFIGDLDKLPPETKAICLKAMEDTRDNDAI 126
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY RDE+ A + + + V S D+ +I+ +L T D PDPDL+IR GG
Sbjct: 127 TLNIALNYGGRDELVHAFRQMLDE----GVASKDLTEEMISSHLYTKDQPDPDLLIRPGG 182
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E RLS+FL++Q+AY+E F WPDF R F AL + R+RR+G LS
Sbjct: 183 ELRLSNFLIYQLAYAELYFTDTLWPDFDRACFDEALADFAKRNRRYGALS 232
>gi|113461126|ref|YP_719194.1| undecaprenyl pyrophosphate synthetase [Haemophilus somnus 129PT]
gi|170717709|ref|YP_001784781.1| undecaprenyl diphosphate synthase [Haemophilus somnus 2336]
gi|112823169|gb|ABI25258.1| Undecaprenyl pyrophosphate synthetase [Haemophilus somnus 129PT]
gi|168825838|gb|ACA31209.1| undecaprenyl diphosphate synthase [Haemophilus somnus 2336]
Length = 241
Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 96/227 (42%), Positives = 135/227 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R GH+ GI+ E V+ A ++GIK LT++AFS NW R
Sbjct: 12 PQHVAIIMDGNGRWAKQQGKMRIWGHKNGIKAVRESVSYARKIGIKVLTLYAFSSENWSR 71
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE+S L+ L L L KNNIK+++IG+ ++ + +K AE T NT L
Sbjct: 72 PESEVSALMSLFMQTLDIEVKKLHKNNIKLQIIGDVSQFNERLQEKIKRAEKLTENNTAL 131
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY +I +A + Q ++ + ++D + +L T P DL+IRT G
Sbjct: 132 TLNIAANYGGCWDIVQATCQLVQLVKENKLHIDEIDEQIFQHHLTTGSQPPVDLLIRTSG 191
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+R+S+FLLWQ+AY+E F WPDF+ + F A+ Y R+RRFG
Sbjct: 192 EQRISNFLLWQIAYAELYFTDTLWPDFNEQEFNQAILAYQQRERRFG 238
>gi|329122934|ref|ZP_08251505.1| di-trans,poly-cis-decaprenylcistransferase [Haemophilus aegyptius
ATCC 11116]
gi|327471865|gb|EGF17305.1| di-trans,poly-cis-decaprenylcistransferase [Haemophilus aegyptius
ATCC 11116]
Length = 239
Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 95/228 (41%), Positives = 136/228 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA + R GH G+ + VA A ++G++ LT++AFS NW R
Sbjct: 10 PKHVAIIMDGNGRWAKQKNKMRIFGHTNGVTAVRKAVAYARQIGVEVLTLYAFSSENWSR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EIS L+ L L + L KNNI +++IG+ + + +K+AE+ T NT L
Sbjct: 70 PEQEISALMSLFMQALDREVKKLHKNNICLKIIGDVSRFSETLQEKIKKAENLTEKNTAL 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY +I +A K I + ++ + D+++S +L T + P DL+IRT G
Sbjct: 130 TLNIAANYGGCWDIIQAAKQIAEKVKKEEMSVSDINNSTFQHHLATQNAPPVDLLIRTSG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R+S+FLLWQ+AY+E F WPDF++ F HA+ Y R RRFGG
Sbjct: 190 EQRISNFLLWQIAYAELYFSDVLWPDFNQLEFNHAIASYQQRHRRFGG 237
>gi|301155651|emb|CBW15119.1| undecaprenyl pyrophosphate synthase [Haemophilus parainfluenzae
T3T1]
Length = 239
Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 93/228 (40%), Positives = 137/228 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA + R GH G+ V+ A + G+K LT++AFS NW R
Sbjct: 10 PEHVAIIMDGNGRWAKQQNKLRIFGHTNGVAAVRRAVSYARQTGVKFLTLYAFSSENWNR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L L + L KNNI++++IG+ + + + +AE+ T NT L
Sbjct: 70 PEQEVSALMTLFMQALDREVKKLHKNNIRLKIIGDVSRFSEKLQEKIAKAENLTENNTAL 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY +I +A + + + +++ + D++ SL ++L T D P DL+IRT G
Sbjct: 130 TLNIAANYGGCWDIVQATQQLAEKVKNNEISVSDINESLFQQHLVTQDEPPVDLLIRTSG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R+S+FLLWQ+AY+E F+ WPDFS + F A+ Y R RRFGG
Sbjct: 190 EQRISNFLLWQIAYAELCFLDVLWPDFSEKDFNQAIACYQQRHRRFGG 237
>gi|255598448|ref|XP_002537011.1| undecaprenyl pyrophosphate synthetase, putative [Ricinus communis]
gi|223517818|gb|EEF25371.1| undecaprenyl pyrophosphate synthetase, putative [Ricinus communis]
Length = 165
Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 86/159 (54%), Positives = 117/159 (73%)
Query: 84 SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDE 143
+F+++ L K N++VRVIG+R+ L DDI +L+EAE TR NT L L IAFNY +RDE
Sbjct: 1 AFIRRDLAELHKENVRVRVIGDRVGLKDDIRALLEEAEQTTRDNTALTLIIAFNYGARDE 60
Query: 144 ISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVA 203
I+RA ++ +D+ G + + + I+ LDT+ +PDPDLIIRT GE+RLS+FLLWQ A
Sbjct: 61 IARAAASLARDVAEGRLDASAITPDAISARLDTAGIPDPDLIIRTSGEERLSNFLLWQAA 120
Query: 204 YSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
YSEF+FIP+YWPDF+R+ A++QY RDRRFGGLS +
Sbjct: 121 YSEFLFIPDYWPDFNRQTLVAAIDQYMTRDRRFGGLSTQ 159
>gi|190573498|ref|YP_001971343.1| undecaprenyl pyrophosphate synthase [Stenotrophomonas maltophilia
K279a]
gi|190011420|emb|CAQ45038.1| putative undecaprenyl pyrophosphate synthetase [Stenotrophomonas
maltophilia K279a]
Length = 255
Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 98/241 (40%), Positives = 138/241 (57%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
V + ++ P H+ IIMDGNGRWA R PR GHR G N + E+GI LT+F
Sbjct: 4 VPPPLPATLPRHVAIIMDGNGRWAQQRRRPRVIGHRAGARAVNRTIERCLELGIPALTLF 63
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+ L+KL L + L + ++VR IG R ++ ++ AE
Sbjct: 64 AFSSENWGRPQEEVDALMKLFLGALDREVDELHRRGVRVRFIGERERFGAGLVSRMQLAE 123
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T NT L L IA +Y R +I+RA + + ++ +G + +D SL+ + +D+P
Sbjct: 124 QRTADNTTLTLSIAASYGGRQDIARAARALAAEVAAGRLLPEQIDESLLGSQVALADLPP 183
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL IRTGG+ R+S+FLLWQ+AY+E F WPDF L AL+ Y R+RRFG S
Sbjct: 184 PDLFIRTGGDTRISNFLLWQLAYTELWFTEALWPDFDAALLQQALDAYGSRERRFGLTSA 243
Query: 242 K 242
+
Sbjct: 244 Q 244
>gi|115374987|ref|ZP_01462258.1| undecaprenyl diphosphate synthase [Stigmatella aurantiaca DW4/3-1]
gi|310820543|ref|YP_003952901.1| undecaprenyl diphosphate synthase [Stigmatella aurantiaca DW4/3-1]
gi|115368014|gb|EAU66978.1| undecaprenyl diphosphate synthase [Stigmatella aurantiaca DW4/3-1]
gi|309393615|gb|ADO71074.1| Undecaprenyl diphosphate synthase [Stigmatella aurantiaca DW4/3-1]
Length = 262
Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 90/227 (39%), Positives = 133/227 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+GIIMDGNGRWA RGLPR GHR+G E+ A VGI LT++AFS NW R
Sbjct: 20 PRHVGIIMDGNGRWAEVRGLPRLEGHREGSSSVREVTRTARRVGISALTLYAFSSQNWAR 79
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L++L++ FL+ + + N I++ IG + + L+ + N G+
Sbjct: 80 PAEEVAGLMELLREFLESEYSEILDNGIRLNAIGEVDKMPRYVKEPLERLRRDSAHNQGM 139
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y R+EI A++ + + + +G + + + ++L T +P DL++RT G
Sbjct: 140 VLTLALSYGGREEILHAMQQVARAVANGELSPDRLGEKELEEHLWTQGLPPLDLVVRTSG 199
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+FLLWQ+AY+E F WPDF E F L QY R+RRFG
Sbjct: 200 EFRVSNFLLWQMAYAELCFADVLWPDFRSEAFLRCLAQYQQRERRFG 246
>gi|226532742|ref|NP_001150939.1| undecaprenyl pyrophosphate synthetase [Zea mays]
gi|195643120|gb|ACG41028.1| undecaprenyl pyrophosphate synthetase [Zea mays]
Length = 287
Score = 191 bits (486), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 96/242 (39%), Positives = 138/242 (57%), Gaps = 5/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + S P H+ ++MDGN RWA ARGLP AGH G E+V + G++ LT
Sbjct: 42 LPGGLRAESLPRHVAVVMDGNSRWARARGLPSAAGHEAGRRALEEVVRLSRAWGVRTLTA 101
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW RP E+ L+ + +++ + I++RVIG+ L + +EA
Sbjct: 102 FAFSHENWSRPKVEVEFLMGQFERAIRESVAEFLREGIRLRVIGDSSRLPVSLQRTAREA 161
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS--- 177
E+ TR N+ L+L +A +YS R +I +A + + Q + + D+D SL A L+TS
Sbjct: 162 EEATRNNSQLDLTLAISYSGRRDIVQACRTLAQKVRDKLLEPEDIDESLFAGELETSHAN 221
Query: 178 --DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
++P PDL+IRT GE RLS+FLLWQ AY+E F WPDF + AL + RDRR
Sbjct: 222 GNELPYPDLVIRTSGELRLSNFLLWQSAYAELFFTDTLWPDFGEADYLQALVSFQSRDRR 281
Query: 236 FG 237
FG
Sbjct: 282 FG 283
>gi|68249506|ref|YP_248618.1| undecaprenyl pyrophosphate synthetase [Haemophilus influenzae
86-028NP]
gi|68057705|gb|AAX87958.1| undecaprenyl pyrophosphate synthetase [Haemophilus influenzae
86-028NP]
Length = 239
Score = 191 bits (486), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 95/228 (41%), Positives = 136/228 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA + R GH G+ + VA A ++G++ LT++AFS NW R
Sbjct: 10 PKHVAIIMDGNGRWAKQKNKMRIFGHANGVTAVRKAVAYARQIGVEVLTLYAFSSENWSR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EIS L+ L L + L KNNI +++IG+ + + +K+AE+ T NT L
Sbjct: 70 PEQEISALMSLFMQALDREVKKLHKNNICLKIIGDVSRFSETLQEKIKKAENLTEKNTAL 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY +I +A K I + ++ + D+++S +L T + P DL+IRT G
Sbjct: 130 TLNIAANYGGCWDIIQAAKQIAEKVKKEEMSVSDINNSTFQHHLATQNAPPVDLLIRTSG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R+S+FLLWQ+AY+E F WPDF++ F HA+ Y R RRFGG
Sbjct: 190 EQRISNFLLWQIAYAELYFSDVLWPDFNQLEFNHAIASYQQRHRRFGG 237
>gi|262404590|ref|ZP_06081145.1| undecaprenyl pyrophosphate synthetase [Vibrio sp. RC586]
gi|262349622|gb|EEY98760.1| undecaprenyl pyrophosphate synthetase [Vibrio sp. RC586]
Length = 232
Score = 191 bits (486), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 139/220 (63%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA A+G PR GH+ G+ + ++ +A +GIK +T+FAFS NWRRP E+
Sbjct: 1 MDGNGRWAKAQGKPRVFGHKNGVAAVRKTISTSARLGIKAVTLFAFSSENWRRPEEEVGV 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L + L L KNN+++RVIG++ + + + +AE+ T NTG+ + IA N
Sbjct: 61 LMELFITVLSTEIKKLHKNNLRLRVIGDKSRFSERLQSKIAQAEELTANNTGMVVNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y + +I +A K + + + G + D+D ++ ++L +D+P+ DL+IRT GE R+S+F
Sbjct: 121 YGGQWDILQATKALAEKAKQGDLQPADIDEAMFKQHLTMADLPEVDLLIRTSGECRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+LWQ+AY+E F P +WP+F A+ + R+RRFG
Sbjct: 181 MLWQLAYAEMYFTPVFWPEFDENCLIEAVTWFVNRERRFG 220
>gi|242240391|ref|YP_002988572.1| undecaprenyl diphosphate synthase [Dickeya dadantii Ech703]
gi|242132448|gb|ACS86750.1| undecaprenyl diphosphate synthase [Dickeya dadantii Ech703]
Length = 253
Score = 191 bits (486), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 93/228 (40%), Positives = 138/228 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG R GH+ G++ V+ A ++ LT++AFS NW R
Sbjct: 17 PRHVAIIMDGNGRWAKQRGRLRIFGHQAGVKSVRRAVSYAVSHHLEALTLYAFSSENWNR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L++L L SL K+N+++RVIG+ + ++ +E T N+GL
Sbjct: 77 PAQEVASLMELFVRALDSEVKSLHKHNVRLRVIGDISRFSARLQERIRRSESLTEKNSGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I +K I + ++ G + ++D S + +Y+ SD+ DL+IRTGG
Sbjct: 137 TLNIAANYGGRWDIINGVKKIAEQVQEGVLRPDNIDESTLCRYVCLSDLAPVDLVIRTGG 196
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E R+S+FLLWQ+AY+E F WPDF + F A+N ++ R+RRFGG
Sbjct: 197 EHRISNFLLWQIAYAELYFTDVLWPDFDEQTFEGAINAFSQRERRFGG 244
>gi|24215993|ref|NP_713474.1| undecaprenyl pyrophosphate synthase [Leptospira interrogans serovar
Lai str. 56601]
gi|45656745|ref|YP_000831.1| undecaprenyl pyrophosphate synthase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|42559820|sp|Q8F144|UPPS_LEPIN RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|73920267|sp|Q72U10|UPPS_LEPIC RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|24197217|gb|AAN50492.1| undecaprenyl pyrophosphate synthase [Leptospira interrogans serovar
Lai str. 56601]
gi|45599981|gb|AAS69468.1| undecaprenyl pyrophosphate synthetase protein [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
Length = 241
Score = 191 bits (486), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 93/237 (39%), Positives = 142/237 (59%), Gaps = 1/237 (0%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ S+ P HI +IMDGNGRWA +RG R GHR+G + + ++ A+ E+G+KN++++AFS
Sbjct: 3 LFESNLPKHIAVIMDGNGRWATSRGKSRSEGHREGAQAIDRLMDASLELGLKNISLYAFS 62
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RPV+EI + L+ F++ ++ K I++ G+R L +L + A D+T
Sbjct: 63 TENWKRPVTEIRSIFSLLIEFIETRLDTIHKRGIRILHSGSRKKLTRGVLDKIDFAVDKT 122
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVC-SHDVDSSLIAKYLDTSDVPDPD 183
+ N L + NY SRDE+ RA + +F + + V + K+L TS +P D
Sbjct: 123 QKNKNLTVNFCLNYGSRDELLRAAQELFLERKRSKVALEKPLKEKEFEKFLYTSILPPVD 182
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
L+IRT GE+RLS+FLLWQ AY+E F WP+F + +L Y R R+FGGL+
Sbjct: 183 LLIRTAGEQRLSNFLLWQSAYAELYFTDTLWPEFDKNSLVDSLKWYETRTRKFGGLT 239
>gi|289208667|ref|YP_003460733.1| undecaprenyl diphosphate synthase [Thioalkalivibrio sp. K90mix]
gi|288944298|gb|ADC71997.1| undecaprenyl diphosphate synthase [Thioalkalivibrio sp. K90mix]
Length = 250
Score = 191 bits (486), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 100/236 (42%), Positives = 140/236 (59%), Gaps = 3/236 (1%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
V+S + P H+ IIMDGNGRWA ARGL R GHR+G+E V AE GI++LT+F
Sbjct: 3 VSSATDPALPGHVAIIMDGNGRWAQARGLDRSEGHREGLEATRRAVRFYAEHGIQSLTVF 62
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP +E+ L +L + ++ L + I++R IG+R + + + EAE
Sbjct: 63 AFSSENWGRPRAEVEALFELFVTAIEGELPELVERGIRLRFIGDRATFPPTLQTRMGEAE 122
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ T N G+ L +A Y R +I +A + GS D +S+ A+ L T+ + D
Sbjct: 123 EATAGNEGMCLVVALGYGGRWDILQAARRWVAS--GGSEADGDAESAFAAE-LSTAGLAD 179
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRTGGE+R+S+FLLWQ AY+E +FI YWPD + F +L Y R RRFG
Sbjct: 180 VDLLIRTGGEQRISNFLLWQAAYAEILFIETYWPDVGVKDFERSLAWYAQRQRRFG 235
>gi|320534190|ref|ZP_08034718.1| di-trans,poly-cis-decaprenylcistransferase [Actinomyces sp. oral
taxon 171 str. F0337]
gi|320133600|gb|EFW26020.1| di-trans,poly-cis-decaprenylcistransferase [Actinomyces sp. oral
taxon 171 str. F0337]
Length = 291
Score = 191 bits (486), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 94/238 (39%), Positives = 139/238 (58%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ ++S P H+ ++MDGNGRWA ARGLPR GHR G ++ A A E+G+K L+++AFS
Sbjct: 28 LPAASLPQHVAVVMDGNGRWANARGLPRTEGHRVGEANMLDVAAGAIEIGVKELSVYAFS 87
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRR E+ ++ + L+ L N+++ +G L +L L+EAE T
Sbjct: 88 TENWRRSPGEVRFIMGFARKVLRVQRDVLNSWNVRLCWVGRTPRLWKSVLRELREAERVT 147
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NTGL L + NY R EI+ A + I +D+ +G + + V+ I +YL + + D DL
Sbjct: 148 AHNTGLTLNLCINYGGRAEIADATRAIAEDVAAGRLKTSSVNEKTIQRYLYSPTMRDVDL 207
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTG E+R S+FL+W +Y+E F P WPDF+R + A Y R+RR+GG K
Sbjct: 208 FIRTGDEQRTSNFLMWSSSYAELYFSPLAWPDFNRTELWRACEAYAGRERRYGGAVDK 265
>gi|225434602|ref|XP_002279235.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 317
Score = 191 bits (486), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 142/230 (61%), Gaps = 2/230 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ +IMDGN RWA RGLP +GH+ G+ E+V + GIK L++FAFS +NW R
Sbjct: 86 PEHVAVIMDGNVRWAQKRGLPAASGHQAGVRSLRELVGLCCKWGIKVLSVFAFSYDNWSR 145
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ LI+ +K + + I+V VIG+ L + + ++ + E+ T+ N+ L
Sbjct: 146 SEGEVGFLMSLIERVVKAELPNFGREGIRVSVIGDLSKLPEQLQKLIIDVEETTKENSRL 205
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT--SDVPDPDLIIRT 188
+A +YS + +I +A KNI ++ G + D++ SLI + L T ++ P PDL+IRT
Sbjct: 206 QFIVALSYSGQCDILQACKNIGYKVKDGLIEPEDINKSLIEQELQTNCTEFPFPDLLIRT 265
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GE R+S+F+LWQ+AY+E F WPDF ++ F AL+ + R RR+GG
Sbjct: 266 SGELRVSNFMLWQIAYTELCFFSTLWPDFGKDEFVEALSSFQKRQRRYGG 315
>gi|158333613|ref|YP_001514785.1| undecaprenyl pyrophosphate synthase [Acaryochloris marina
MBIC11017]
gi|158303854|gb|ABW25471.1| undecaprenyl diphosphate synthase [Acaryochloris marina MBIC11017]
Length = 250
Score = 191 bits (485), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 86/230 (37%), Positives = 135/230 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA RGLPR GHR+G++ ++ + G++ LT +AFS NW R
Sbjct: 21 PKHVAVIMDGNGRWAKQRGLPRIVGHRRGVDTLKSLLRCCKDWGVQALTAYAFSTENWGR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P+ E+ L+ L + L++ + +++ +G+ +L + ++ A T+ N +
Sbjct: 81 PLDEVEFLMMLFERVLRRELQEMIDEGVQIHFVGDLEALPLTLQTEIQRAMTATKDNHTI 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY R EI +A +NI ++ + D+D SL ++L T+ + DPDL+IRT G
Sbjct: 141 KFIVATNYGGRREIIQACRNIASKVQHNQINLDDIDESLFERHLYTAGIIDPDLLIRTSG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E R+S+FLLWQ+AY+E WPDF R+ F AL + R RRFG ++
Sbjct: 201 EMRVSNFLLWQMAYAELYVTKTLWPDFDRDEFHQALKDFQDRHRRFGKVN 250
>gi|304409566|ref|ZP_07391186.1| undecaprenyl diphosphate synthase [Shewanella baltica OS183]
gi|307303924|ref|ZP_07583677.1| undecaprenyl diphosphate synthase [Shewanella baltica BA175]
gi|304352084|gb|EFM16482.1| undecaprenyl diphosphate synthase [Shewanella baltica OS183]
gi|306912822|gb|EFN43245.1| undecaprenyl diphosphate synthase [Shewanella baltica BA175]
Length = 275
Score = 191 bits (485), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 90/233 (38%), Positives = 143/233 (61%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
++ S P H+ IIMDGNGRWA +G R GH+ G++ V+ A+++GI++LT+FAFS
Sbjct: 31 LVKQSLPKHVAIIMDGNGRWAQTQGKLRVLGHKAGVKAVRRAVSTASQLGIESLTLFAFS 90
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRRP E+S L++L + L++ L KN +K+++IG+ + + A+++T
Sbjct: 91 SENWRRPDKEVSLLMELFFTVLQREIKLLHKNQVKLKIIGDISRFSARLQKQIAAAQEKT 150
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NTGL L +A NY R +I +A + + + +E+G + S ++ +L + + DL
Sbjct: 151 SGNTGLVLNVAANYGGRWDILQAAQKLAEKVETGEMTSSQFTEEALSAHLCMQNQSEVDL 210
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+IRTGG+ R+S+F+LWQ AY+E VF WPDF + F A+ + R RRFG
Sbjct: 211 MIRTGGDCRISNFVLWQAAYAELVFTDTLWPDFDEQAFHEAIAIFASRQRRFG 263
>gi|116749217|ref|YP_845904.1| undecaprenyl diphosphate synthase [Syntrophobacter fumaroxidans
MPOB]
gi|116698281|gb|ABK17469.1| Undecaprenyl pyrophosphate synthetase [Syntrophobacter fumaroxidans
MPOB]
Length = 248
Score = 191 bits (485), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 99/232 (42%), Positives = 135/232 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R R GH +G E+V E+GI LT++AFS NW+R
Sbjct: 10 PRHVSIIMDGNGRWANLRLANRVFGHNEGANSVREVVKCCLELGIPYLTLYAFSKENWQR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE++ L L++ FLK F L I+VR +G+ + ++L L+ + T L
Sbjct: 70 PESEVTALWHLLRRFLKSEFADLVSRRIRVRHLGDPDDIPMEVLNELRHVVEATADFDRL 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY R EI RA + D+ +G S + ++YL T+D+PDPDLIIRTGG
Sbjct: 130 VLSLAINYGGRQEILRAARKYAGDVLAGRAESDALSQEEFSRYLFTTDLPDPDLIIRTGG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AY+E WPDF F AL ++ R+RRFG S +
Sbjct: 190 EYRVSNFLLWQLAYAELYITATLWPDFREPQFHEALAEFQRRERRFGKTSDQ 241
>gi|294787448|ref|ZP_06752701.1| di-trans,poly-cis-decaprenylcistransferase [Parascardovia
denticolens F0305]
gi|315226982|ref|ZP_07868769.1| di-trans,poly-cis-decaprenylcistransferase [Parascardovia
denticolens DSM 10105]
gi|294484804|gb|EFG32439.1| di-trans,poly-cis-decaprenylcistransferase [Parascardovia
denticolens F0305]
gi|315119432|gb|EFT82565.1| di-trans,poly-cis-decaprenylcistransferase [Parascardovia
denticolens DSM 10105]
Length = 267
Score = 191 bits (485), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 141/241 (58%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ S P H+G+IMDGNGRWA RGL R GH+ V + +A A E G++ L++
Sbjct: 23 IIPHFPSGKVPKHVGVIMDGNGRWAQQRGLVRTEGHKAAEPVVFDTIAGAIEAGVRYLSL 82
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW+R SE+ L+ + + + + ++VR G R L ++ L+ A
Sbjct: 83 YTFSTENWKRSPSEVRFLMGFSRDIIHRRVDQMNDWGVRVRWSGRRPRLWKSVIEELETA 142
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
++TR N +++ NY R EI+ A I +++ +G + V +I+++L D+P
Sbjct: 143 MEKTRKNKTIDVVFCINYGGRAEIADAAAQIAREVAAGKIKGDRVTEKMISEHLYNPDIP 202
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
D DL+IRT GE+R S+FL W+ AY+E F+PE WPD R++ + +++ Y RDRRFGG+
Sbjct: 203 DCDLVIRTSGEQRTSNFLPWEAAYAELDFVPELWPDCGRQVLWRSIDHYTNRDRRFGGVK 262
Query: 241 K 241
K
Sbjct: 263 K 263
>gi|197286126|ref|YP_002151998.1| undecaprenyl pyrophosphate synthetase [Proteus mirabilis HI4320]
gi|194683613|emb|CAR44510.1| undecaprenyl pyrophosphate synthetase [Proteus mirabilis HI4320]
Length = 252
Score = 191 bits (485), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 93/236 (39%), Positives = 145/236 (61%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S+S P H+ IIMDGNGRWA +G R GHR GI+ + V+ + + I++LT++AFS
Sbjct: 9 SASKPKHVAIIMDGNGRWAKKQGKLRVTGHRAGIKAVRDAVSFSVKHKIESLTLYAFSSE 68
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP E+S L++L L SL K+N+++ +IG+ + +K + T
Sbjct: 69 NWNRPEQEVSSLMELFVFALDNEVKSLHKHNVRLTIIGDISRFSRRLQDRIKNSVALTAN 128
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTGLNL IA NY R +I+++++ + + G + D++ + I+ +L D DL+I
Sbjct: 129 NTGLNLNIAANYGGRWDITQSVQQLASSLAKGELAVEDINENTISSHLCLHDQSPVDLVI 188
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE R+S+FL+WQ+AY+E F WPDF ++F +AL+ + R+RRFGG + +
Sbjct: 189 RTGGEHRISNFLIWQIAYAELYFTQVLWPDFDEQVFQNALDAFAKRERRFGGTTSE 244
>gi|329296132|ref|ZP_08253468.1| undecaprenyl diphosphate synthase [Plautia stali symbiont]
Length = 250
Score = 191 bits (485), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 93/237 (39%), Positives = 145/237 (61%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S P H+ IIMDGNGRWA +G R +GH+ G++ V+ A ++ LT++AFS
Sbjct: 13 SYCTPRHVAIIMDGNGRWAKNQGKLRISGHKAGVKSVRRAVSFAVSNKLEALTLYAFSSE 72
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP+ E++ L++L L SL K+N+++R+IG+ ++ I ++ AE+ T+
Sbjct: 73 NWSRPLQEVTALMELFVWALDSEVKSLHKHNVRLRIIGDISRFNNRIQKRIRRAEELTQQ 132
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N GL L IA NY R +I + +K + + ++ G + + +A +L ++ DL+I
Sbjct: 133 NDGLTLNIAANYGGRWDIIQGVKKLAEQVQEGLLRPDQITEESLAPHLCMQELAPVDLVI 192
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
RTGGE R+S+FLLWQ+AY+EF F WPDF +F ALN ++LR+RR+GG + G
Sbjct: 193 RTGGEHRISNFLLWQIAYAEFWFTDVLWPDFDEHVFEGALNAFSLRERRYGGAAPSG 249
>gi|330445149|ref|ZP_08308801.1| di-trans,poly-cis-decaprenylcistransferase [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
gi|328489340|dbj|GAA03298.1| di-trans,poly-cis-decaprenylcistransferase [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
Length = 253
Score = 191 bits (485), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 97/240 (40%), Positives = 142/240 (59%), Gaps = 10/240 (4%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + + P+HI +IMDGNGRWA A+G R GH+ G+E + V+ A +GIK LT+FA
Sbjct: 8 AGLSADCLPNHIAVIMDGNGRWAKAKGKARVFGHKAGVEAVRKTVSTANRLGIKALTLFA 67
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP +E+S L++L + L + L KNNI++R+IG+ + + AE
Sbjct: 68 FSSENWRRPEAEVSLLMELFMTVLSREVKRLHKNNIRLRIIGDTTRFSGRLQEKIATAEA 127
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQ-----DIESGSVCSHDVDSSLIAKYLDTS 177
T NTG+ L +A NY + +I A K + Q D++ + D++S L T
Sbjct: 128 LTADNTGMVLNVAANYGGQWDILEAAKQLAQRAVDNDLDISELTEQDLESG-----LSTY 182
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+PD DL+IRT GE R+S+F+LWQ AY+E F ++WPDF +A+ + R+RRFG
Sbjct: 183 GLPDVDLLIRTSGECRVSNFMLWQTAYAELYFTEQHWPDFDETSLMNAVAWFVTRERRFG 242
>gi|262276523|ref|ZP_06054332.1| undecaprenyl pyrophosphate synthetase [Grimontia hollisae CIP
101886]
gi|262220331|gb|EEY71647.1| undecaprenyl pyrophosphate synthetase [Grimontia hollisae CIP
101886]
Length = 256
Score = 191 bits (485), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 138/227 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA ARG R GH+ G++ + V+AA +G++ LT+FAFS NWRR
Sbjct: 16 PKHIAVIMDGNGRWAKARGKARMFGHKAGVDAVRKTVSAANRLGVQVLTLFAFSSENWRR 75
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L + L + L KN ++++VIG+ + + AE T NT L
Sbjct: 76 PEEEVSLLMELFVTVLGREVKRLHKNGVRLKVIGDTTRFSQSLQDKIAAAEALTANNTRL 135
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY + +I +A+K + +E G + + + + + +L ++ +PD DL+IRT G
Sbjct: 136 VLNVAANYGGQWDIMQAVKKLAAQVERGEIPAEQLTEADLQVHLSSAGLPDVDLMIRTSG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+F+LWQ AY+E F ++WPDF A+ Y R+RRFG
Sbjct: 196 ECRISNFMLWQAAYAELYFTDQFWPDFDETSLTEAIAWYINRERRFG 242
>gi|145638259|ref|ZP_01793869.1| hypothetical protein CGSHiII_05794 [Haemophilus influenzae PittII]
gi|145272588|gb|EDK12495.1| hypothetical protein CGSHiII_05794 [Haemophilus influenzae PittII]
gi|309751413|gb|ADO81397.1| Undecaprenyl pyrophosphate synthetase [Haemophilus influenzae
R2866]
Length = 239
Score = 191 bits (485), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 96/228 (42%), Positives = 135/228 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA + R GH G+ + VA A ++G+K LT++AFS NW R
Sbjct: 10 PKHIAIIMDGNGRWAKQKNKMRIFGHTNGVTAVRKAVAYARQIGVKVLTLYAFSSENWSR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EIS L+ L L + L KNNI +++IG+ + + +K+AE+ T NT L
Sbjct: 70 PEQEISALMSLFMQALDREVKKLHKNNICLKIIGDVSRFSETLQEKIKKAENLTEKNTAL 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY +I +A K I + ++ + D+++S +L T + P DL+IRT G
Sbjct: 130 TLNIAANYGGCWDIVQATKQIAEKVKKEEMSVSDINNSTFQHHLATQNAPPVDLLIRTSG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R+S+FLLWQ+AY+E F WPDF++ F A+ Y R RRFGG
Sbjct: 190 EQRISNFLLWQIAYAELYFSDVLWPDFNQLEFNRAIASYQQRHRRFGG 237
>gi|317046987|ref|YP_004114635.1| undecaprenyl diphosphate synthase [Pantoea sp. At-9b]
gi|316948604|gb|ADU68079.1| undecaprenyl diphosphate synthase [Pantoea sp. At-9b]
Length = 250
Score = 191 bits (485), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 93/233 (39%), Positives = 143/233 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R +GH+ G++ V+ A ++ LT++AFS NW R
Sbjct: 17 PRHVAIIMDGNGRWAKNQGKLRISGHKAGVKSVRRAVSFAVSHKLEALTLYAFSSENWSR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P+ E++ L++L L SL K+N+++R+IG+ + I ++ AE+ T+ N GL
Sbjct: 77 PIQEVTALMELFVWALDSEVKSLHKHNVRLRIIGDISRFNSRIQERIRRAEELTQQNNGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I + K + + ++ G + + +A YL +++ DL+IRTGG
Sbjct: 137 TLNIAANYGGRWDIIQGAKKLAEQVQEGLLRPDQITEESLAPYLCMNELAPVDLVIRTGG 196
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
E R+S+FLLWQ+AY+EF F WPDF +F ALN ++LR+RR+GG + G
Sbjct: 197 EHRISNFLLWQIAYAEFWFTDVLWPDFDEHVFEGALNAFSLRERRYGGAAPGG 249
>gi|71275616|ref|ZP_00651901.1| Di-trans-poly-cis-decaprenylcistransferase [Xylella fastidiosa
Dixon]
gi|71899513|ref|ZP_00681670.1| Di-trans-poly-cis-decaprenylcistransferase [Xylella fastidiosa
Ann-1]
gi|170729575|ref|YP_001775008.1| undecaprenyl pyrophosphate synthase [Xylella fastidiosa M12]
gi|71163507|gb|EAO13224.1| Di-trans-poly-cis-decaprenylcistransferase [Xylella fastidiosa
Dixon]
gi|71730733|gb|EAO32807.1| Di-trans-poly-cis-decaprenylcistransferase [Xylella fastidiosa
Ann-1]
gi|167964368|gb|ACA11378.1| Di-trans,poly-cis-decaprenylcistransferase [Xylella fastidiosa M12]
Length = 255
Score = 191 bits (485), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 134/227 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R PR GHR G++ V E GIK LT+FAFS NW R
Sbjct: 13 PRHIAIIMDGNGRWAERRSRPRTTGHRAGVKAAMRTVDFCLEKGIKMLTLFAFSSENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+++ +G L + ++VR IG R D ++ + +AE T N GL
Sbjct: 73 PADEVNFLMEMSIKLFGRGIEELHRRGVQVRFIGERKRFDIALVEHMTKAEHLTANNQGL 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y R +I+ A + + +D+ +G + +D L+ +++ +D+P PD+ IRT G
Sbjct: 133 ILSLAVSYGGRQDITMAARALAKDVAAGRLKPEQIDEDLLGQHMALADLPPPDMFIRTSG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
R+S+FLLWQ+AY+E F WP+F+ + AL+ Y R+RRFG
Sbjct: 193 VIRISNFLLWQIAYTELWFTDVMWPEFNSTVLQQALDDYASRERRFG 239
>gi|330836660|ref|YP_004411301.1| Undecaprenyl pyrophosphate synthetase [Spirochaeta coccoides DSM
17374]
gi|329748563|gb|AEC01919.1| Undecaprenyl pyrophosphate synthetase [Spirochaeta coccoides DSM
17374]
Length = 239
Score = 191 bits (485), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 94/241 (39%), Positives = 143/241 (59%), Gaps = 4/241 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M+ + +SS P H+G IMDGNGRWA R LPR AGH +G++ ++ AAA+ GI+ +T+
Sbjct: 1 MLDTTVSSIIPTHVGFIMDGNGRWAQKRALPRVAGHLEGLKACRRVIIAAAKQGIRYVTL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW+RP E+S L+ ++ S + + ++I++ V G+ L L+
Sbjct: 61 YVFSTENWKRPAQEVSYLMGMLVSKIHGELNFYRTHDIRILVRGDISQLPQASREALEAT 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSV-CSHDVDSSLIAKYLDTSDV 179
+T G+ +A NY RDEI R+I++ + +G + C DV LI+ L V
Sbjct: 121 IRETASAKGMTCVLAINYGGRDEIVRSIRDCLK---TGRISCPEDVTEELISTSLTLPSV 177
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDPD+++R+ GEKRLS+FLLWQ+AY+E F + WPD+ E + + R RR+GGL
Sbjct: 178 PDPDIVVRSAGEKRLSNFLLWQIAYAELAFYDKLWPDWDSEDVKKLCDDFASRTRRYGGL 237
Query: 240 S 240
S
Sbjct: 238 S 238
>gi|325681485|ref|ZP_08161011.1| di-trans,poly-cis-decaprenylcistransferase [Ruminococcus albus 8]
gi|324106975|gb|EGC01265.1| di-trans,poly-cis-decaprenylcistransferase [Ruminococcus albus 8]
Length = 242
Score = 191 bits (485), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 89/230 (38%), Positives = 138/230 (60%), Gaps = 1/230 (0%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
PP H+G+IMDGNGRWA RGLPR GHR+G + F I A VG+ +T +AFS NW+
Sbjct: 14 PPAHVGVIMDGNGRWAKKRGLPRKFGHREGAKTFRTITRHAKAVGVDYITYYAFSTENWK 73
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ ++ L + +L + + NI++R IG+R L + + + E+ ++
Sbjct: 74 RPKDEVESIMDLFEKYLDE-VKDFIEENIRIRFIGDRSVLRPSLQEKMLDTEETSKDFDA 132
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ L +A NY RDEI ++K + + ++ G + D+ +I + L T ++P DL+IR
Sbjct: 133 MTLVLAINYGGRDEICHSVKTLAEKVKRGELDPKDITEEMIERNLYTEEIPPLDLVIRPS 192
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE+RLS+F++WQ AY+EF + WPDF F A+ + R+RRFGG+
Sbjct: 193 GEQRLSNFMIWQAAYAEFYYTNILWPDFKNADFDRAILDFCERNRRFGGV 242
>gi|325983650|ref|YP_004296052.1| undecaprenyl diphosphate synthase [Nitrosomonas sp. AL212]
gi|325533169|gb|ADZ27890.1| undecaprenyl diphosphate synthase [Nitrosomonas sp. AL212]
Length = 252
Score = 191 bits (484), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 96/236 (40%), Positives = 136/236 (57%), Gaps = 2/236 (0%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ S P HI IIMDGNGRWA R +PR AGH++G+E ++ A E I LT+FAFS
Sbjct: 14 TGSIPKHIAIIMDGNGRWAKTRYMPRIAGHKQGVETVRGVIKACIERNIPYLTLFAFSSE 73
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E++ L++L L++ L +N I +VIG+ + I ++ E T
Sbjct: 74 NWRRPADEVTSLMQLFLGALEQEITRLHENGICFKVIGDLSKFEPKITEFIRIGEQLTAE 133
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N L IA NY R +I +A++ + ++S + + +A+YL S P+PDL I
Sbjct: 134 NNRLTFTIAANYGGRWDIMQAMRKMM--MQSTEELPLNFEEENLAQYLALSYAPEPDLFI 191
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE R+S+FLLWQ+AY+E F WPDF A+ Y R+RRFG S++
Sbjct: 192 RTGGEYRISNFLLWQLAYTELYFTDTLWPDFDEHELERAIQSYQQRERRFGCTSEQ 247
>gi|328882347|emb|CCA55586.1| Undecaprenyl pyrophosphate synthetase [Streptomyces venezuelae ATCC
10712]
Length = 274
Score = 191 bits (484), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 89/235 (37%), Positives = 139/235 (59%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ S P+H+ I+MDGNGRWA RGLPR GH+ G E +++ A E+G+ +++++AFS
Sbjct: 29 LQSELVPEHVAIVMDGNGRWAKERGLPRTEGHKVGAEQVLDVLQGAIEMGVGSISLYAFS 88
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+R E+ L+ + F++K L ++VR +G L + L+ A++QT
Sbjct: 89 TENWKRSPEEVRFLMNFNRDFIRKSRDQLDSLGVRVRWVGRMPKLWKSVAKELQVAQEQT 148
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NT L L+ NY R E++ A + + +D+ +G + + I KYL D+PD DL
Sbjct: 149 KDNTKLTLYFCMNYGGRAELTDAAQALAEDVRAGRLDPAKITEKTIQKYLYYPDMPDVDL 208
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+R GE+R S++L+WQ AY+E VF WPDF R + A ++ RDRRFGG+
Sbjct: 209 FLRPSGEQRTSNYLIWQSAYAEMVFQDVLWPDFDRRDLWRACVEFAQRDRRFGGV 263
>gi|283851249|ref|ZP_06368532.1| undecaprenyl diphosphate synthase [Desulfovibrio sp. FW1012B]
gi|283573418|gb|EFC21395.1| undecaprenyl diphosphate synthase [Desulfovibrio sp. FW1012B]
Length = 240
Score = 191 bits (484), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 101/231 (43%), Positives = 128/231 (55%), Gaps = 4/231 (1%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S + P H+ IIMDGNGRWA RGLPR GHR G E +V E+GI++LT++ FS
Sbjct: 4 SQTLPRHVAIIMDGNGRWATMRGLPRSEGHRAGTEAARGVVTRCRELGIRHLTLYTFSKE 63
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP E+ L L+ FL + +L +I+ +V+G L VL +T
Sbjct: 64 NWGRPADEVKFLFDLLVRFLTRELDTLLTQSIRFQVLGEMADLPLATRKVLAHVIAKTAH 123
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
T + L +A NYS R+EI RA +N+ + V DV +A L T+ PDPDLII
Sbjct: 124 CTEMTLNLALNYSGREEILRACRNLV----AQGVAPGDVTEERLAAALYTAGQPDPDLII 179
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE RLS +LLWQ AYSEF F WPDF+ L Y R RRFG
Sbjct: 180 RTSGEMRLSGYLLWQSAYSEFAFPDTLWPDFTPAELDAVLADYQTRSRRFG 230
>gi|313673947|ref|YP_004052058.1| undecaprenyl pyrophosphate synthetase [Calditerrivibrio
nitroreducens DSM 19672]
gi|312940703|gb|ADR19895.1| Undecaprenyl pyrophosphate synthetase [Calditerrivibrio
nitroreducens DSM 19672]
Length = 243
Score = 191 bits (484), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 137/227 (60%), Gaps = 1/227 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+GIIMDGNGRWA R LPR GHR+G++ IV AA +GIK L++FAFS NW R
Sbjct: 9 PLHVGIIMDGNGRWAKKRLLPRVMGHREGVKTVKRIVEHAANMGIKYLSLFAFSTENWFR 68
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L+ +L ++ + I +RV G+ L + L + + ++ N +
Sbjct: 69 PEEEVSTLMGLLDEYLDSEMRNIVEKGISLRVSGDISKLREATKTKLMDIIEASKNNRRM 128
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY RDE+ +A ++ +D SG + ++ L YL DVPD DL+IRT G
Sbjct: 129 VLNLALNYGGRDELLKAASDLARDFASGKIAESEL-GLLFKNYLYNPDVPDIDLLIRTSG 187
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+F+LW++AYSE F WPDFS + F A+ YN R RRFG
Sbjct: 188 EIRISNFMLWRLAYSELYFTKVLWPDFSEKDFDEAIEDYNRRIRRFG 234
>gi|268610454|ref|ZP_06144181.1| undecaprenyl pyrophosphate synthetase [Ruminococcus flavefaciens
FD-1]
Length = 246
Score = 191 bits (484), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 89/231 (38%), Positives = 143/231 (61%), Gaps = 5/231 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
PDH+G IMDGNGRWA RGLPR GHR+G + F +IV ++G+KN++ +AFS NW+R
Sbjct: 19 PDHVGFIMDGNGRWAKKRGLPRSFGHREGAKQFKKIVRYCKDIGLKNISFYAFSTENWQR 78
Query: 71 PVSEISELVKLIKSFLK--KGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
P E++ +++L + ++ + F S N ++ +G++ + D+D+ + + E+ T
Sbjct: 79 PAEEVNTIMELFRDYIVDVRNFLS---ENTRMIFLGDKSAFDEDLQEKMIKLEEDTAKYD 135
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+ L +A NY RDEI+ A + + + G + D+ I+ L T+ PD DL+IR
Sbjct: 136 EMTLMMAVNYGGRDEITHAARILAEKAAKGEIKPEDITEQSISDNLYTAGFPDVDLLIRP 195
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE+R+S++L+WQ AY+EF + WPDF+ + AL +Y R+RRFGG+
Sbjct: 196 SGEQRISNYLIWQCAYAEFYYTDVLWPDFTPDELDKALAEYARRNRRFGGV 246
>gi|299139478|ref|ZP_07032652.1| undecaprenyl diphosphate synthase [Acidobacterium sp. MP5ACTX8]
gi|298598406|gb|EFI54570.1| undecaprenyl diphosphate synthase [Acidobacterium sp. MP5ACTX8]
Length = 304
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 100/257 (38%), Positives = 146/257 (56%), Gaps = 19/257 (7%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ S P H+ IIMDGNGRWA R L R GH++G E +V A+ + + LT++AF
Sbjct: 29 TLEPSRIPQHVAIIMDGNGRWAGKRALKRFLGHQQGAESVQHVVETASRIDLPWLTLYAF 88
Query: 64 SI-NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
S+ NN RRP SE+S L+KL+KS+L + NN+++ IG L D+ ++ A +
Sbjct: 89 SLENNLRRPKSEVSFLMKLLKSYLVSNVKRMNDNNVRMAYIGRTCELPGDVQDTMQWAAE 148
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGS----------VCSHDVDSSLIAK 172
QT NTG L +A NY +R EI + +NI + + + + + VD ++ A+
Sbjct: 149 QTAKNTGTTLTLALNYGARSEIVDSARNIVHAMIAEAAKRGVSLEDMLAAEGVDDAIKAR 208
Query: 173 Y--------LDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFH 224
L T +PDPDL+IRT GE+R+S+FLLWQ+AY+E WPDF
Sbjct: 209 IDEPQLSANLYTGHMPDPDLLIRTSGEQRISNFLLWQIAYAEIFVTERLWPDFRGLHLLE 268
Query: 225 ALNQYNLRDRRFGGLSK 241
A+ Y R+RRFGGL +
Sbjct: 269 AIADYQQRERRFGGLGE 285
>gi|108760968|ref|YP_630774.1| undecaprenyl diphosphate synthase [Myxococcus xanthus DK 1622]
gi|108464848|gb|ABF90033.1| undecaprenyl diphosphate synthase [Myxococcus xanthus DK 1622]
Length = 263
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 138/232 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+GIIMDGNGRWA +RGLPR GHR+ E+ A +GI+ LT++AFS NW R
Sbjct: 20 PRHVGIIMDGNGRWAESRGLPRLEGHREATSSVREVTRTARRLGIQALTLYAFSSQNWAR 79
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L++ +L++ + N I++ IG+ L + L + NTG+
Sbjct: 80 PAEEVAGLMDLLREYLERERSEILDNGIRLNAIGDVDRLPRYVRDPLDRLRADSAHNTGM 139
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y R+EI A + + + +E G + + ++ S ++L T +P DL++RT G
Sbjct: 140 VLSLALSYGGREEILHAARRLAEAVERGELAAGRLEESDFEQFLWTQGLPPLDLMVRTSG 199
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AY+E F WPDF + F ++QY R+RRFG S +
Sbjct: 200 ELRVSNFLLWQMAYAEMCFTDALWPDFRTDEFLRCVSQYQQRERRFGLTSAQ 251
>gi|90580975|ref|ZP_01236776.1| putative undecaprenyl diphosphate synthase [Vibrio angustum S14]
gi|90437853|gb|EAS63043.1| putative undecaprenyl diphosphate synthase [Vibrio angustum S14]
Length = 253
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/240 (40%), Positives = 145/240 (60%), Gaps = 10/240 (4%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + + P+HI +IMDGNGRWA A+G R GH+ G+E + V+ A +GIK LT+FA
Sbjct: 8 AGLSADCLPNHIAVIMDGNGRWAKAKGKARVFGHKAGVEAVRKTVSTANRLGIKALTLFA 67
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP +E+S L++L + L + L KNNI++R+IG++ + + AE+
Sbjct: 68 FSSENWRRPEAEVSLLMELFMTVLSREVKRLHKNNIQLRIIGDKRRFSQRLQDKILAAEE 127
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQ-----DIESGSVCSHDVDSSLIAKYLDTS 177
T NTG+ L IA NY + +I A K + Q +++ ++ D++S L T
Sbjct: 128 LTADNTGMVLNIAANYGGQWDILEAAKRLAQHAIDNELDLETLTEQDLESG-----LSTY 182
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+P+ DL+IRT GE R+S+F+LWQ AY+E F E+WPDF +A+ + R+RRFG
Sbjct: 183 GLPEVDLLIRTSGECRISNFMLWQTAYAELFFTEEHWPDFDESSLLNAVAWFVTRERRFG 242
>gi|329119072|ref|ZP_08247764.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria bacilliformis
ATCC BAA-1200]
gi|327464811|gb|EGF11104.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria bacilliformis
ATCC BAA-1200]
Length = 248
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 96/234 (41%), Positives = 141/234 (60%), Gaps = 6/234 (2%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P HI +IMDGNGRWA R LPR GH+KG++ + A + G++ LT+FAFS NW
Sbjct: 13 SIPRHIAVIMDGNGRWAKKRFLPRVMGHKKGLDALENLCAECSAAGVQYLTVFAFSTENW 72
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RRP E+ L+ L L K + ++N++++VIG+R + +I ++ AE T N+
Sbjct: 73 RRPPDEVGFLMGLFLQALHKQVQRMHEHNMRLKVIGDRSRFNAEINAGIEAAERLTAANS 132
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL L IA +Y R +I +A + + +H +S L A+ + D P+PDL IRT
Sbjct: 133 GLTLTIAADYGGRWDILQAANKLL-----AAGKTHIGESDLNAELM-LGDAPEPDLFIRT 186
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GGE R+S+FLLWQ+AY+E F WPDF ++ F A+ + R+RRFG S++
Sbjct: 187 GGEMRISNFLLWQMAYAELYFTDTLWPDFDKKAFQAAIASFQKRERRFGRTSEQ 240
>gi|288574895|ref|ZP_06393252.1| undecaprenyl diphosphate synthase [Dethiosulfovibrio peptidovorans
DSM 11002]
gi|288570636|gb|EFC92193.1| undecaprenyl diphosphate synthase [Dethiosulfovibrio peptidovorans
DSM 11002]
Length = 232
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 133/227 (58%), Gaps = 5/227 (2%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA RGLPR GHR G+ IV AA + GI+ L+++AFS NW RP
Sbjct: 10 HLAIIMDGNGRWAKKRGLPRLLGHRAGVNTLERIVYAAKDRGIRYLSVYAFSNENWNRPS 69
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
EI L+KL + +K L K +I+VR G + L + ++ + AE +T + L
Sbjct: 70 VEIKGLMKLFSYYARKKLRDLVKADIRVRFAGRKEGLPESVVQAMDVAETETFDCEKMTL 129
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
FNY R EI ++ ++ + + + S+L YL +VPDPDLI+RT GE
Sbjct: 130 IACFNYGGRQEIVDSVNRFVKEHPGEPISENAICSNL---YL--PEVPDPDLIVRTSGEL 184
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLS+F LWQ +YSEF F WPDF+ E AL +N R+RR+GGL
Sbjct: 185 RLSNFWLWQSSYSEFFFTSSLWPDFTPEALDEALKTFNKRERRYGGL 231
>gi|294629248|ref|ZP_06707808.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. e14]
gi|292832581|gb|EFF90930.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. e14]
Length = 279
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 90/228 (39%), Positives = 137/228 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ I+MDGNGRWA RGLPR GH+ G E +++ + E+G++N++++AFS NW+R
Sbjct: 35 PEHVAIVMDGNGRWAKERGLPRTEGHKVGAERVLDVLQGSIEIGVRNISLYAFSTENWKR 94
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + F+++ L + I+VR +G L + L+ A++QT+ N L
Sbjct: 95 SPDEVRFLMNFNRDFIRRTRDQLDELGIRVRWVGRMPRLWKSVAKELQVAQEQTKGNDLL 154
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L+ NY R E++ A K + +D+ +G + V I KYL D+PD DL +R G
Sbjct: 155 TLYFCMNYGGRAELADAAKAMAEDVAAGRLDPSKVSEKTIQKYLYYPDMPDVDLFLRPSG 214
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S++LLWQ AY+E VF WPDF R + A ++ RDRRFGG
Sbjct: 215 EQRTSNYLLWQSAYAEMVFQDVLWPDFDRRDLWRACLEFASRDRRFGG 262
>gi|282856756|ref|ZP_06266017.1| di-trans,poly-cis-decaprenylcistransferase [Pyramidobacter
piscolens W5455]
gi|282585379|gb|EFB90686.1| di-trans,poly-cis-decaprenylcistransferase [Pyramidobacter
piscolens W5455]
Length = 233
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/227 (42%), Positives = 132/227 (58%), Gaps = 6/227 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA RGLPR GHR GI V AA E+GI L+++AFS NW R
Sbjct: 8 PKHVALIMDGNGRWANKRGLPRLLGHRAGIAALERTVRAAGEMGIGFLSVYAFSTENWNR 67
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L++ + ++ L KN ++VR G R + D++L ++ +E +T +
Sbjct: 68 PQLEVMGLMALLRYYARRKVPELVKNGVRVRFCGARRGVPDEVLRIIDWSETETARCGRM 127
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + FNY R EI AI + + G S + D + K+L DVPDPDLIIRT G
Sbjct: 128 TLVVCFNYGGRQEILDAIADAQSN---GETISSEED---LRKHLYLPDVPDPDLIIRTSG 181
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+F LWQ +YSE+ F WPDF AL Y R+RR+G
Sbjct: 182 ELRISNFWLWQGSYSEYYFTDTLWPDFGAAELKKALQSYAGRERRYG 228
>gi|123968731|ref|YP_001009589.1| undecaprenyl pyrophosphate synthetase [Prochlorococcus marinus str.
AS9601]
gi|123198841|gb|ABM70482.1| Undecaprenyl pyrophosphate synthetase (UPPS) [Prochlorococcus
marinus str. AS9601]
Length = 267
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 90/229 (39%), Positives = 133/229 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA +G PR GH+KG+ V EI+ A+ ++G K LT++AFS NW R
Sbjct: 24 PEHVAIIMDGNGRWATKKGFPRTYGHKKGVSVLKEILKASKKLGCKVLTVYAFSTENWTR 83
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L L+ + + + K++ IG+ +++ ++ +E T+ N
Sbjct: 84 PTKEVDFLINLFIEVLRNEIREIHEESTKIKFIGDITPFPENLKKIISNSESLTKNNNKF 143
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R EI + K + SG + +V+ L L T + DP+L+IRT G
Sbjct: 144 LLNVCVNYGGRQEIVKVAKELALKSSSGEIKPSEVNEELFNSELLTRGIKDPELLIRTSG 203
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
EKR+S+FLLWQ+AYSE WPDF+ F A+ Y R+RRFGG+
Sbjct: 204 EKRISNFLLWQLAYSEIYISDVMWPDFNEFEFLKAIIDYQSRNRRFGGI 252
>gi|160900376|ref|YP_001565958.1| undecaprenyl diphosphate synthase [Delftia acidovorans SPH-1]
gi|160365960|gb|ABX37573.1| undecaprenyl diphosphate synthase [Delftia acidovorans SPH-1]
Length = 248
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 96/236 (40%), Positives = 136/236 (57%), Gaps = 7/236 (2%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S + P HI +IMDGNGRWA R LPR AGH++G+E A + G++ LT+FAFS
Sbjct: 6 SGAVPRHIAVIMDGNGRWANRRFLPRLAGHKQGVESLRRCARACVQRGVQVLTVFAFSSE 65
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP E+S L+ L+ + L K L ++ +++ IG+R L + + L +AE T
Sbjct: 66 NWNRPEEEVSGLMGLLANALAKEVQQLSRDGVRLHFIGDRSGLSEKVCAGLAQAEQVTAH 125
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N L L + FNY R +I++A + + E + ++D +L + VPDPDL+I
Sbjct: 126 NNRLVLNVCFNYGGRWDIAQAAARLAEQGE--PITPQNLDRALALAH-----VPDPDLLI 178
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE R+S+FLLWQ AYSE F WPDF A+ + R+RRFG S +
Sbjct: 179 RTGGEMRISNFLLWQAAYSELFFSASLWPDFDEACLDEAIAAFTSRERRFGQTSAQ 234
>gi|311895949|dbj|BAJ28357.1| putative undecaprenyl diphosphate synthase [Kitasatospora setae
KM-6054]
Length = 275
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 90/228 (39%), Positives = 133/228 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +MDGNGRWA RGLPR GH+ G V +++ E+G+KNL+++AFS NW+R
Sbjct: 34 PHHVACVMDGNGRWAKERGLPRTEGHKVGEGVVLDVLRGCLEIGVKNLSLYAFSTENWKR 93
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ + I++R +G + ++ L+ A++QT+ N +
Sbjct: 94 SPEEVKFLMNFNRDVIRRRRDEMDAMGIRIRWVGRMPRMWKSVVQELQVAQEQTKGNDAM 153
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L+ NY R EI+ A I +D+ +G + V+ L AKYL D+PD DL +R G
Sbjct: 154 TLYFCVNYGGRAEIADAALAIARDVAAGKLNPEKVNEKLFAKYLYYPDMPDVDLFLRPSG 213
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S+FL WQ AY+E VF WPDF R + A QY RDRRFGG
Sbjct: 214 EQRTSNFLAWQSAYAELVFQDVLWPDFDRRDLWRACEQYAHRDRRFGG 261
>gi|325295075|ref|YP_004281589.1| Undecaprenyl pyrophosphate synthase [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065523|gb|ADY73530.1| Undecaprenyl pyrophosphate synthase [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 227
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 96/230 (41%), Positives = 139/230 (60%), Gaps = 6/230 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+GIIMDGNGRWA RGLPR GHR+G +V EIV AA+++GIK L+++AFS NW+R
Sbjct: 4 PVHVGIIMDGNGRWARKRGLPRVEGHREGAKVTEEIVIAASKLGIKYLSLYAFSTENWKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L L+ ++K NN++ R +G L D + KE E++T G+
Sbjct: 64 PKEEVNFLFHLMYEYVKNKLSLFLDNNVRFRAMGRLWELPDYLQEGFKEIEEKTLHCDGM 123
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
A NY R EI A+ + I++G ++ ++ KYL ++P+ DL+IRT G
Sbjct: 124 VAVFAVNYGGRQEILDAVN---RAIKAG---EKEITEEILRKYLYIPELPNLDLLIRTSG 177
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E R+S+FL+W AY+E F WPDF+ E F A+ + R+RRFGG+
Sbjct: 178 ELRISNFLIWHSAYTELWFTKTLWPDFTEEEFKKAIEDFKKRERRFGGIK 227
>gi|269101943|ref|ZP_06154640.1| undecaprenyl pyrophosphate synthetase [Photobacterium damselae
subsp. damselae CIP 102761]
gi|268161841|gb|EEZ40337.1| undecaprenyl pyrophosphate synthetase [Photobacterium damselae
subsp. damselae CIP 102761]
Length = 254
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/233 (39%), Positives = 139/233 (59%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + S P HI IIMDGNGRWA A+G R GH+ G+E + V+ A +GIK +T+FAFS
Sbjct: 10 LCADSLPKHIAIIMDGNGRWAQAKGKARVFGHKAGVEAVRKAVSTANRLGIKAVTLFAFS 69
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRRP E+S L++L + L + L KN+IK++++G++ + + AE T
Sbjct: 70 SENWRRPEDEVSLLMELFITVLGREVKRLHKNSIKLKILGDKSRFSQRLQDKIASAEALT 129
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NTG+ L +A NY + +I +A K Q + + + +I+ L T+ PD DL
Sbjct: 130 ENNTGMVLNVAANYGGQWDILQATKKAMQKLIEQGLEPDSMTEEMISAELSTAGEPDVDL 189
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+IRT GE R+S+F+LWQ AY+E F ++WPDF + A+ + R+RRFG
Sbjct: 190 LIRTSGECRISNFMLWQTAYAELYFTEQHWPDFDEQSLTDAIAWFVTRERRFG 242
>gi|258545342|ref|ZP_05705576.1| undecaprenyl diphosphate synthase [Cardiobacterium hominis ATCC
15826]
gi|258519445|gb|EEV88304.1| undecaprenyl diphosphate synthase [Cardiobacterium hominis ATCC
15826]
Length = 239
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 142/235 (60%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ +PP H+ IIMDGNGRWA PR GH+ G + +V A A+ G+K L+++AFS
Sbjct: 4 ARTPPAHVAIIMDGNGRWAQQHLRPRAFGHKAGRVAVDRVVTACAKAGVKMLSLYAFSTE 63
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+ L++LI++ L++ ++KN+I++RV+G+R +L + + +AE T
Sbjct: 64 NWRRPPHEVKILMELIETALREEAEKMRKNDIRLRVLGDRTALSASLRSAIDDAEALTAS 123
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
+ +++ +A NYS + + + + Q + G++ + +D + + + D+P DL+I
Sbjct: 124 GSRMDVVLAINYSGQWALCETARRLAQAVADGTLQADAIDEAAFSAHRPMPDLPPVDLLI 183
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
R+ GE RLS+F LW++AY+E F WPDF A Y+ RDRRFG LS+
Sbjct: 184 RSSGEMRLSNFHLWELAYAELWFTDVLWPDFGEAQLDAAFAAYHHRDRRFGALSQ 238
>gi|107103166|ref|ZP_01367084.1| hypothetical protein PaerPA_01004235 [Pseudomonas aeruginosa PACS2]
gi|313109057|ref|ZP_07795029.1| undecaprenyl pyrophosphate synthetase [Pseudomonas aeruginosa
39016]
gi|310881531|gb|EFQ40125.1| undecaprenyl pyrophosphate synthetase [Pseudomonas aeruginosa
39016]
Length = 234
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/225 (40%), Positives = 137/225 (60%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGN RWA R LP AGH+ G++ ++ AE G++ LT+FAFS NW+RP E+S
Sbjct: 1 MDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAEAGVEVLTLFAFSSENWQRPADEVSA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L L++ L +N I++R+IG+R ++ ++EAE T NT L +A N
Sbjct: 61 LMELFLVALRREVRKLDENGIRLRIIGDRTRFHPELQAAMREAEAATAGNTRFLLQVAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y + +I +A + + ++++ G + + D+ + L+ L T D P PDL IRTGGE R+S+F
Sbjct: 121 YGGQWDIVQAAQRLAREVQGGHLAADDISAELLQGCLVTGDQPLPDLCIRTGGEHRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
LLWQ+AY+E F +WPDF AL ++ R RRFG S++
Sbjct: 181 LLWQLAYAELYFSDLFWPDFKHAAMRAALADFSKRQRRFGKTSEQ 225
>gi|295100641|emb|CBK98186.1| Undecaprenyl pyrophosphate synthetase [Faecalibacterium prausnitzii
L2-6]
Length = 237
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/226 (41%), Positives = 142/226 (62%), Gaps = 1/226 (0%)
Query: 14 IGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVS 73
IGIIMDGNGRWA +RGLPR AGH+KG +VF +I E+G++++ +AFS NW+RP
Sbjct: 13 IGIIMDGNGRWAKSRGLPRTAGHKKGAQVFQDIADYCDELGVESVYFYAFSTENWKRPAE 72
Query: 74 EISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLF 133
E+ +++L +L KGF + N+++ +G+R L+ + ++ + E + TGL +
Sbjct: 73 EVGAIMRLFGEYLIKGF-DYENRNVRICFMGDRTVLEPKLQELMNKLERDSACKTGLTIN 131
Query: 134 IAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKR 193
IA NY R EI RA +++ +G + D+ ++ + T+ DPD I+R GEKR
Sbjct: 132 IAINYGGRPEIVRAAQSLAAKAAAGGLKPEDITEEALSAQMYTAGQKDPDFILRPSGEKR 191
Query: 194 LSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
LS+F+LWQ AYSE V + WPDF+R+ A+ ++N R RRFGG+
Sbjct: 192 LSNFMLWQAAYSELVEMDVLWPDFTRDDLDAAIMEFNRRSRRFGGI 237
>gi|309389221|gb|ADO77101.1| Undecaprenyl pyrophosphate synthetase [Halanaerobium praevalens DSM
2228]
Length = 239
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 143/232 (61%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P I IIMDGNGRWA R R AGH++G++ IV AA ++ +++LT++AFS NW
Sbjct: 2 NTPKSIAIIMDGNGRWAEKRNKSRSAGHKEGVKALKRIVKAAVDLKLESLTVYAFSTENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP +E++ L+ L+K +K L N +++ IG + +L +++ ++ E ++ N
Sbjct: 62 KRPKAEVNFLLTLMKRAMKNEVEELLANGVQINFIGRKDTLSKNLIKEIENIEKKSATNN 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
L L IAFNY R EI A +N+ + + + + +D + YL ++ D +L+IRT
Sbjct: 122 KLTLNIAFNYGGRAEIIDAARNLAKAYKENKLDLNQIDEKGFSNYLYNKNLKDVELLIRT 181
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
GGE RLS+FLLWQ AY+E F+ ++WPDF E A+ ++ R RRFGGL+
Sbjct: 182 GGELRLSNFLLWQSAYAELHFVDKFWPDFYAEDLKEAIKIFSQRTRRFGGLN 233
>gi|297201555|ref|ZP_06918952.1| predicted protein [Streptomyces sviceus ATCC 29083]
gi|297147917|gb|EDY61011.2| predicted protein [Streptomyces sviceus ATCC 29083]
Length = 634
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/236 (39%), Positives = 145/236 (61%), Gaps = 1/236 (0%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIE-VFNEIVAAAAEVGIKNLTIFA 62
++ +S P H+ +IMDGNGRWA RGLPR GHR G E +++ AAE+G+ +LT++A
Sbjct: 381 TIPASRMPRHVAVIMDGNGRWATQRGLPRHEGHRAGAEGATRDVICGAAEIGLAHLTLYA 440
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW+R EI+ L + I++ L+ ++ I++R G+ + L D++ L +AE
Sbjct: 441 FSTENWKRDTEEIAFLFESIRNQLRTYANDKEELGIRIRWAGSAVGLPQDLIEELLQAEL 500
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
+TR TGL + + NY RDE++RA + + +G + V + +A++L D PD
Sbjct: 501 RTRHRTGLCVTVCINYGGRDELTRAAAQLARAAAAGDIDPDHVSDTDLARHLTWPDTPDV 560
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DL+ RTGGE+R+S+FLLWQ AY+E F WPD R + A+ +Y++R RR G
Sbjct: 561 DLLWRTGGEQRISNFLLWQAAYAELHFTDTNWPDIDRRDLWQAITEYSVRQRRHGA 616
>gi|229588807|ref|YP_002870926.1| undecaprenyl pyrophosphate synthetase [Pseudomonas fluorescens
SBW25]
gi|229360673|emb|CAY47531.1| undecaprenyl pyrophosphate synthetase [Pseudomonas fluorescens
SBW25]
Length = 251
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 138/232 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGN RWA R +P AGH+ G++ ++ AE ++ LT+FAFS NW+R
Sbjct: 13 PRHVAIIMDGNNRWAKKRFMPGVAGHKAGVDAVRAVIEVCAEAKVEVLTLFAFSSENWQR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L L++ L NNI +R+IG+R ++ ++EAE T
Sbjct: 73 PAEEVSALMDLFFRALRREAKRLNDNNICLRIIGDRSRFHPELQAAMREAEAITAGANRF 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY + +I++A + + +++++G + D+ L+ L T D+P PDL IRTGG
Sbjct: 133 VLQIAANYGGQWDIAQAAQRLAREVQAGHLRPDDITPELLQTCLVTGDLPLPDLCIRTGG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AY+E F +WPDF + AL + R RRFG S++
Sbjct: 193 EHRISNFLLWQLAYTELYFSDLFWPDFKHDAMRTALADFASRQRRFGKTSEQ 244
>gi|114562452|ref|YP_749965.1| undecaprenyl diphosphate synthase [Shewanella frigidimarina NCIMB
400]
gi|114333745|gb|ABI71127.1| Undecaprenyl pyrophosphate synthetase [Shewanella frigidimarina
NCIMB 400]
Length = 274
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/236 (38%), Positives = 145/236 (61%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
++ ++ S P H+ IIMDGNGRWA +G R GH+ G++ V+ A+++GI++LT+F
Sbjct: 27 LSDVVKQSLPKHVAIIMDGNGRWAQLQGKARVFGHKAGVKAVRRAVSTASQLGIESLTLF 86
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP E+S L++L + L++ L KN +K+ +IG+ + + + A+
Sbjct: 87 AFSSENWRRPDKEVSLLMELFFTVLQRELKLLDKNQVKLNIIGDTSRFSNRLQKQIAGAQ 146
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T NTGL L +A NY R +I +A + + + +ESG + S + + ++L + +
Sbjct: 147 EKTASNTGLILNVAANYGGRWDILQAAQKLAEKVESGEITSSQMTEEALNEHLCMQNQSE 206
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRTGG+ R+S+F+LWQ AY+E VF WPDF F A+ + R RRFG
Sbjct: 207 VDLMIRTGGDYRISNFVLWQAAYAELVFTDTLWPDFDELAFRDAIAIFASRQRRFG 262
>gi|163731913|ref|ZP_02139360.1| undecaprenyl diphosphate synthase [Roseobacter litoralis Och 149]
gi|161395367|gb|EDQ19689.1| undecaprenyl diphosphate synthase [Roseobacter litoralis Och 149]
Length = 199
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 124/194 (63%)
Query: 45 EIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIG 104
EIV A VG+K LTIFAFS NW+R +E++ L+ L K ++ + L ++VR IG
Sbjct: 3 EIVEACPSVGVKYLTIFAFSTENWKRTQAEVAGLMSLFKRYIMRETRELNTYGVRVRFIG 62
Query: 105 NRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD 164
+R LD + ++ E E+ T NT ++L IA NY RDE++RA K + QD+ +G + D
Sbjct: 63 DRTRLDSTLARLMTELENATAGNTNMHLTIAINYGGRDEVARATKRLAQDVANGILKPQD 122
Query: 165 VDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFH 224
VD + KYLDT +PDPDL+IRT GE R+S+FLLWQ AYSE+ FI WPDF+R F
Sbjct: 123 VDEETLPKYLDTYVLPDPDLVIRTSGEARISNFLLWQSAYSEYEFIDTLWPDFTRNEFEE 182
Query: 225 ALNQYNLRDRRFGG 238
Y R+RR+GG
Sbjct: 183 VCAAYGGRERRYGG 196
>gi|28198251|ref|NP_778565.1| undecaprenyl pyrophosphate synthetase [Xylella fastidiosa
Temecula1]
gi|182680888|ref|YP_001829048.1| undecaprenyl pyrophosphate synthase [Xylella fastidiosa M23]
gi|42559961|sp|Q87EH7|UPPS_XYLFT RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|28056321|gb|AAO28214.1| undecaprenyl pyrophosphate synthetase [Xylella fastidiosa
Temecula1]
gi|182630998|gb|ACB91774.1| undecaprenyl diphosphate synthase [Xylella fastidiosa M23]
gi|307579356|gb|ADN63325.1| undecaprenyl pyrophosphate synthase [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 255
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 133/227 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R PR GHR G++ V E GIK LT+FAFS NW R
Sbjct: 13 PRHIAIIMDGNGRWAERRSRPRTTGHRAGVKAAMRTVDFCLEKGIKMLTLFAFSSENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+++ +G L + ++VR IG R D ++ + +AE T N L
Sbjct: 73 PADEVNFLMEMSIKLFGRGIEELHRRGVQVRFIGERKRFDIALVEHMTKAEHLTASNQRL 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y R +I+ A + + QD+ +G + +D L+ +++ +D+P PD+ IRT G
Sbjct: 133 ILSLAVSYGGRQDITMAARALAQDVAAGRLKPEQIDEDLLGQHMALADLPPPDMFIRTSG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
R+S+FLLWQ+AY+E F WP+F+ + AL+ Y R+RRFG
Sbjct: 193 VIRISNFLLWQIAYTELWFTDVMWPEFNSTVLQQALDDYASRERRFG 239
>gi|302528828|ref|ZP_07281170.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. AA4]
gi|302437723|gb|EFL09539.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. AA4]
Length = 272
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/228 (39%), Positives = 137/228 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ ++MDGNGRWA RGLPR GH++G V ++ + A E+G+K L+++AFS NW+R
Sbjct: 36 PKHVALVMDGNGRWANQRGLPRIEGHKRGEAVMIDVASGAVELGVKWLSVYAFSTENWKR 95
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ L +++R G R L ++ L+ AE++T+ NT L
Sbjct: 96 SPEEVRFLMGFNRDTIRRQVDYLGSIGVRIRWAGRRPKLWASVIKELQIAEEKTKNNTKL 155
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
N+ + NY R E+ A++ I QD+ +G + +D I KYL ++PD DL +R G
Sbjct: 156 NMTMCVNYGGRAELGDAMRRIGQDVAAGKINPDKIDERTIGKYLYQPEMPDVDLFLRPSG 215
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S+FLLWQ AY+E V+ +PDF R + A + RDRRFGG
Sbjct: 216 EQRTSNFLLWQSAYAEMVYQDTLFPDFDRTHLWQACLDFAKRDRRFGG 263
>gi|256544689|ref|ZP_05472061.1| di-trans,poly-cis-decaprenylcistransferase [Anaerococcus vaginalis
ATCC 51170]
gi|256399578|gb|EEU13183.1| di-trans,poly-cis-decaprenylcistransferase [Anaerococcus vaginalis
ATCC 51170]
Length = 234
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/236 (40%), Positives = 147/236 (62%), Gaps = 4/236 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M +H+ II+DGNGRWA R LPR GH++G E +I A E GIK LT++AFS
Sbjct: 1 MKEKELNHLAIILDGNGRWAKKRNLPRSMGHKEGSENVVDIALYAKEKGIKYLTLYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP E++ L+KL+ F+K L +N +K+ +IG+ L + + + + T+
Sbjct: 61 ENWKRPQVEVNYLMKLLAKFIKDKTKLLMENEVKLNIIGDISKLPEKTIKACLDVCELTK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N L L +A NY R EI +A F+D+ + +++ I+ YL T+++PDPDL+
Sbjct: 121 NNDKLVLNMAINYGGRMEIVKA----FKDMAKDGIDFENINEEDISNYLYTANMPDPDLL 176
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
IRTGG+ R+S+FL++Q+AY+E+ F WPDFS+ A++ Y RDRR+GGL++
Sbjct: 177 IRTGGDLRISNFLIYQMAYTEYYFTDILWPDFSKNDLDVAVDSYFGRDRRYGGLNE 232
>gi|94986828|ref|YP_594761.1| undecaprenyl pyrophosphate synthase [Lawsonia intracellularis
PHE/MN1-00]
gi|94731077|emb|CAJ54440.1| Undecaprenyl pyrophosphate synthase [Lawsonia intracellularis
PHE/MN1-00]
Length = 240
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/227 (41%), Positives = 136/227 (59%), Gaps = 4/227 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA RG+ R GH++G IV ++GIK LT++ FS NW R
Sbjct: 10 PSHIAIIMDGNGRWAKQRGMNRTEGHKQGALTAKSIVTTCRKIGIKYLTLYTFSTENWGR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EI L +L+ SFLK+ + L++N+I + V G+ L L+ A +T+ +
Sbjct: 70 PKDEIHFLFQLLVSFLKQEVHLLEENDICLTVYGDLTKLPLLAKKALQHAIARTKHCQSM 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ +A NYS R E+ A+K + D + ++D++ + YL + PDPDL+IRT G
Sbjct: 130 TVNLAINYSGRTELLYAVKKMLTD----RLNANDLNEEIFRNYLYSKQQPDPDLLIRTSG 185
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
EKRLS++L++Q AYSE F WPDF+ E + L +YN R+RRFG
Sbjct: 186 EKRLSNYLIFQTAYSELFFTNTLWPDFTEEELYAILKEYNERNRRFG 232
>gi|332527874|ref|ZP_08403911.1| undecaprenyl pyrophosphate synthetase [Rubrivivax benzoatilyticus
JA2]
gi|332112451|gb|EGJ12244.1| undecaprenyl pyrophosphate synthetase [Rubrivivax benzoatilyticus
JA2]
Length = 256
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/229 (40%), Positives = 134/229 (58%), Gaps = 4/229 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ ++MDGNGRWA R +PR GH++G++ V AE G++ LT+FAFS NW+R
Sbjct: 22 PRHVAVVMDGNGRWARQRYMPRFFGHKQGVDALVRAVNVFAERGVEYLTVFAFSSENWKR 81
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L+ + K + + +++R+IG+R ++ D + AE T N +
Sbjct: 82 PSDEVSGLMGLVLVAVSKYLAKMAGDGVRIRIIGDRSAVSDKLREAWDRAEALTADNHRI 141
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +AFNY R ++ +A + D + D D S +++++ S PDPDL IRTGG
Sbjct: 142 TLSVAFNYGGRWDVVQACRQAMAD----GIRPEDFDESYLSRHMALSFAPDPDLFIRTGG 197
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+FLLWQ AYSE F WPDF AL + RDRRFGG+
Sbjct: 198 EMRMSNFLLWQAAYSELFFTECLWPDFGEAEIDAALAAFAQRDRRFGGI 246
>gi|119487024|ref|ZP_01620896.1| undecaprenyl pyrophosphate synthetase [Lyngbya sp. PCC 8106]
gi|119455953|gb|EAW37087.1| undecaprenyl pyrophosphate synthetase [Lyngbya sp. PCC 8106]
Length = 249
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/229 (39%), Positives = 135/229 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA RG PR GHR+G+E E++ + GI+ LT +AFS NW R
Sbjct: 21 PKHIAVIMDGNGRWAKRRGWPRTMGHRQGVETLKELLRCCRDWGIEALTAYAFSTENWGR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P+ E+ L+ L + L + + + ++++ +GN +L + ++E++ TR N G+
Sbjct: 81 PLEEVDFLMALFERVLMRELREMMEEEVRIQFVGNLNALPTSLQAKIEESKQSTRNNHGI 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY R EI RA + I ++ G + +++ L K+L T+ + PDL+IRT G
Sbjct: 141 LFNVATNYGGRQEIIRACQEIASQVQQGQLNPDEINEVLFEKHLYTAGLSHPDLLIRTSG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+FLLWQ+AY+E WPDF F AL Y RDRRFG +
Sbjct: 201 EMRISNFLLWQMAYAEIYVTDTLWPDFDSSEFHLALCSYQKRDRRFGKI 249
>gi|330444194|ref|YP_004377180.1| undecaprenyl diphosphate synthase [Chlamydophila pecorum E58]
gi|328807304|gb|AEB41477.1| undecaprenyl diphosphate synthase [Chlamydophila pecorum E58]
Length = 252
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/240 (41%), Positives = 138/240 (57%), Gaps = 5/240 (2%)
Query: 3 ASMMSSSP-PDHIGIIMDGNGRWAAARGLPRC----AGHRKGIEVFNEIVAAAAEVGIKN 57
AS+ P P H+ IIMDGN RW R C +GH G++V +IV++A +GIK
Sbjct: 12 ASLALGKPLPKHVAIIMDGNRRWLKQRRHLCCKGKTSGHYYGVQVLPKIVSSAVTLGIKV 71
Query: 58 LTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
LT+F FS N+ R E+ EL L S L K L +++R IG+ L +I +
Sbjct: 72 LTLFVFSTENFSRSQEEVRELFLLFHSQLGKQLPFLMNQGVRLRCIGDLSKLPQNIQEQI 131
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
AE QT ++ L L +A NY ++DE+ RA K + D+ + S D+ SL+ YLDT+
Sbjct: 132 THAEKQTENSSCLELVLAINYGAKDELVRAFKKLHYDLTRQKISSEDLSESLVGSYLDTA 191
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+ DPDL+IRTGGE R+S+FLLWQ+AY+E WPDF+ + F A+ Y R RR G
Sbjct: 192 GLSDPDLLIRTGGEMRVSNFLLWQIAYTELYVTEVLWPDFTPQHFIDAIKVYQQRSRRGG 251
>gi|299144040|ref|ZP_07037120.1| di-trans,poly-cis-decaprenylcistransferase [Peptoniphilus sp. oral
taxon 386 str. F0131]
gi|298518525|gb|EFI42264.1| di-trans,poly-cis-decaprenylcistransferase [Peptoniphilus sp. oral
taxon 386 str. F0131]
Length = 250
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 98/229 (42%), Positives = 144/229 (62%), Gaps = 1/229 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HIGIIMDGNGRWA + LPR GH++G + EIV A +GIK+L+++AFS NW+R
Sbjct: 23 PNHIGIIMDGNGRWAKNKNLPRYFGHKEGSKRVIEIVEACYNLGIKSLSLYAFSTENWKR 82
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EIS+L+ L+ F+K + +NN+K+ V+G+ L + + A T N +
Sbjct: 83 PEEEISKLMDLLVIFIKSQLDKIMENNVKINVLGDISKLPLKVQKEINRALSLTEHNDKM 142
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L I NY RDEI A K I +D+ + + +D++ +L + YL T + DL+IR G
Sbjct: 143 ILNIGLNYGGRDEIIMATKAICEDVLNKKIAINDIE-TLFSNYLYTKGQNELDLLIRPSG 201
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+F+L+Q+AY+EF F WPDF+ E+ + A+ Y R+RRFGGL
Sbjct: 202 ELRVSNFMLYQLAYAEFWFSNILWPDFTEEVLYEAIIDYQNRNRRFGGL 250
>gi|242059291|ref|XP_002458791.1| hypothetical protein SORBIDRAFT_03g040360 [Sorghum bicolor]
gi|241930766|gb|EES03911.1| hypothetical protein SORBIDRAFT_03g040360 [Sorghum bicolor]
Length = 287
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/238 (39%), Positives = 141/238 (59%), Gaps = 5/238 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + S P H+ ++MDGN RWA ARGLP AGH G E+V + G++ LT FAFS
Sbjct: 46 LRAESLPRHVAVVMDGNSRWARARGLPSAAGHEAGRRALEEVVRLSRAWGVRALTAFAFS 105
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP E+ L+ + +++ ++ I++RVIG+ L + + +EAE+ T
Sbjct: 106 HENWSRPRVEVEFLMGQFERAIRESVAEFLRDGIRLRVIGDSSRLPVSLQKIAREAEEAT 165
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS----DVP 180
R N+ L+L +A +YS R +I +A +N+ Q + + D+D ++ A L+TS ++P
Sbjct: 166 RSNSQLDLTLAISYSGRRDIVQACRNLAQKVHDKLLRPEDIDETIFADELETSHANAELP 225
Query: 181 D-PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+ PDL+IRT GE RLS+FLLWQ AY+E F WPDF + AL + RDRRFG
Sbjct: 226 NYPDLLIRTSGELRLSNFLLWQSAYAELFFTDTLWPDFGEADYLEALVSFQSRDRRFG 283
>gi|325579126|ref|ZP_08149082.1| di-trans,poly-cis-decaprenylcistransferase [Haemophilus
parainfluenzae ATCC 33392]
gi|325159361|gb|EGC71495.1| di-trans,poly-cis-decaprenylcistransferase [Haemophilus
parainfluenzae ATCC 33392]
Length = 239
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/228 (40%), Positives = 136/228 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA + R GH G+ V+ A + G+K LT++AFS NW R
Sbjct: 10 PEHVAIIMDGNGRWAKQQNKLRIFGHTNGVAAVRRAVSYARQTGVKFLTLYAFSSENWNR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L L L KNNI++++IG+ + + + +AE+ T NT L
Sbjct: 70 PEQEVSALMTLFMQALDLEVKKLHKNNIRLKIIGDISRFSEKLQEKIAKAENLTENNTAL 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY +I +A + + + +++ + D++ SL ++L T D P DL+IRT G
Sbjct: 130 TLNIAANYGGCWDIVQATQQLAEKVKNNEISVSDINESLFQQHLVTQDEPPVDLLIRTSG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R+S+FLLWQ+AY+E F+ WPDFS + F A+ Y R RRFGG
Sbjct: 190 EQRISNFLLWQIAYAELCFLDVLWPDFSEKDFNQAIACYQQRHRRFGG 237
>gi|86609106|ref|YP_477868.1| undecaprenyl diphosphate synthase [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86557648|gb|ABD02605.1| undecaprenyl diphosphate synthase [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 248
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 88/227 (38%), Positives = 132/227 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ ++MDGNGRWA RGLPR GH++G+ E++ + GI LT +AFS NW R
Sbjct: 21 PRHVAVVMDGNGRWAQKRGLPRSVGHQRGVAALKELLRCCDDWGIPALTAYAFSTENWGR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ L + L + + + ++++ G +L + + A T+ N G+
Sbjct: 81 AREEVDFLMTLFEQVLWQELGEMVQQGVRIQFAGQLSALPHSLQETIVHAVACTQHNKGI 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY R EI +A ++I ++ G + +D +L +++L T+ + DPDL+IRT G
Sbjct: 141 CLTVALNYGGRQEILQACRSIATLVQQGLLQPDQIDEALFSQFLYTTGLSDPDLLIRTSG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+FLLWQ+AY+E F P WPDF R F AL Y R RRFG
Sbjct: 201 EMRISNFLLWQMAYTEQYFTPILWPDFDRAAFHQALLSYQSRQRRFG 247
>gi|54293493|ref|YP_125908.1| undecaprenyl pyrophosphate synthetase [Legionella pneumophila str.
Lens]
gi|73920266|sp|Q5WZ40|UPPS_LEGPL RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|53753325|emb|CAH14772.1| Undecaprenyl pyrophosphate synthetase [Legionella pneumophila str.
Lens]
Length = 238
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/236 (38%), Positives = 144/236 (61%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M+ P HI ++MDGNGRWA +RGLPR GH+ G++ +I+ E I L++FAFS
Sbjct: 1 MNHKLPQHIAVVMDGNGRWAESRGLPRVEGHKAGLDSVKKIINCCLEKKISCLSLFAFSS 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RPV+E++ L++L L+K L ++ I+++ G+R L + + +AE T+
Sbjct: 61 ENWSRPVTEVNFLMELFLEALRKEIDDLNQHGIRLKFTGDREPLSQVLQKQMSDAEALTK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N L L + NY + +I A + + + + G + +++ ++ A++LDT +P+PDL
Sbjct: 121 NNQQLILNVVVNYGGKWDIVTAARKLIRTVLDGKLAYDEINEAVFAQFLDTKGMPEPDLF 180
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
IRT GE R+S+F LWQ+AY+E F +WPDF+ F AL ++ R RRFG +S+
Sbjct: 181 IRTSGELRISNFFLWQLAYTELYFTDVHWPDFNEHEFELALISFSKRARRFGQISQ 236
>gi|227114692|ref|ZP_03828348.1| undecaprenyl pyrophosphate synthetase [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 253
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/235 (39%), Positives = 141/235 (60%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ S+ P H+ IIMDGNGRWA +RG R GH+ G++ V+ A G+ LT++AFS
Sbjct: 12 LPSAGPRHVAIIMDGNGRWAKSRGKMRIFGHQAGVKAVRRSVSFAVSQGLDALTLYAFSS 71
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+S L++L L SL K+N+++RVIG+ + ++ +E T
Sbjct: 72 ENWNRPAQEVSALMELFVRALDSEVKSLHKHNVRLRVIGDIGRFSPRLQERIRRSEALTE 131
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N GL L IA NY R +I + ++ + + ++ G + ++ + + +Y+ D+ DL+
Sbjct: 132 KNQGLTLNIAANYGGRWDIIQGVRQLAEQVQEGILRPDSINEASLCQYICLHDLAPVDLV 191
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IRTGGE R+S+FLLWQ+AY+E F WPDF ++F ALN + R+RRFGG +
Sbjct: 192 IRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQVFEGALNAFAQRERRFGGTT 246
>gi|56478855|ref|YP_160444.1| undecaprenyl pyrophosphate synthase [Aromatoleum aromaticum EbN1]
gi|56314898|emb|CAI09543.1| Undecaprenyl pyrophosphate synthase [Aromatoleum aromaticum EbN1]
Length = 263
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/237 (42%), Positives = 133/237 (56%), Gaps = 7/237 (2%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P HI IIMDGNGRWA R LPR AGH +G+E ++ A E G+ LT+FAFS N
Sbjct: 17 SGVPRHIAIIMDGNGRWARKRFLPRVAGHSRGVESVRSVIRACMERGVSYLTLFAFSSEN 76
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+S L++L L+K L N I+ RVIG+ D ++ +++ AE +T N
Sbjct: 77 WRRPADEVSFLMQLFMRSLQKEVDRLHDNGIRFRVIGDLSRFDPKLVDMIRRAEARTAAN 136
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIF--QDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
L L IA NY R +I +A+ + D+ L Y P+PDL
Sbjct: 137 EKLTLTIAANYGGRWDILQAMTRMLAKHPERREGFTEEDLSGELSLNY-----GPEPDLF 191
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTGGE+R+S+FLLWQ+AYSE F WPDF A+ Y R+RRFG S++
Sbjct: 192 IRTGGEQRISNFLLWQLAYSELYFTDTLWPDFDVAALDEAIRSYQARERRFGRTSEQ 248
>gi|271499500|ref|YP_003332525.1| undecaprenyl diphosphate synthase [Dickeya dadantii Ech586]
gi|270343055|gb|ACZ75820.1| undecaprenyl diphosphate synthase [Dickeya dadantii Ech586]
Length = 253
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/230 (39%), Positives = 138/230 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG R +GH+ G++ ++ A ++ LT++AFS NW R
Sbjct: 17 PRHVAIIMDGNGRWAKQRGKLRISGHQAGVKSVRRAISYAVSQNLEALTLYAFSSENWNR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L L SL K+N+++RVIG+ + +++ +E T NTGL
Sbjct: 77 PAQEVSALMELFVRVLNSEVKSLHKHNVRLRVIGDISRFSSRLQGLIQRSEAMTENNTGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I ++ I + ++ G + +D S + +Y+ +D+ DL+IRT G
Sbjct: 137 TLNIAANYGGRWDIIHGVRKIAEQVQEGLLRPDTIDESTLNRYMCLNDLAPVDLLIRTSG 196
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E R+S+FLLWQ+AY+E F WPDF + F A++ + R+RRFGG +
Sbjct: 197 EHRISNFLLWQIAYAELYFTDVLWPDFDEQTFEGAIHAFAQRERRFGGTT 246
>gi|212636273|ref|YP_002312798.1| Di-trans-poly-cis-decaprenylcistransferase [Shewanella
piezotolerans WP3]
gi|212557757|gb|ACJ30211.1| Di-trans-poly-cis-decaprenylcistransferase [Shewanella
piezotolerans WP3]
Length = 266
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 145/236 (61%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+++++ S P H+ IIMDGNGRWA A+G PR GH+ G++ V+ A +G+++LT+F
Sbjct: 19 LSALVKQSIPKHVAIIMDGNGRWAQAQGKPRVVGHKAGVKAVRRAVSTARTLGVESLTLF 78
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP E+S L++L + L++ L KN++++ +IG+ + + A+
Sbjct: 79 AFSSENWRRPDKEVSLLMELFFTVLQRELKLLDKNDVRLNIIGDISRFSSRLQKQIATAQ 138
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T N GL L +A NY R +I +A + + +E+G + S + ++L + +
Sbjct: 139 EKTANNCGLVLNVAANYGGRWDIMQAAQKLAAKVEAGEMSSEQFTEEALNEHLCMHNQSE 198
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRTGG+ R+S+F+LWQ AY+E VF WPDF + F A+ ++ R RRFG
Sbjct: 199 VDLMIRTGGDYRISNFVLWQAAYAELVFTDTLWPDFDEDAFKDAIVKFASRQRRFG 254
>gi|15837652|ref|NP_298340.1| undecaprenyl pyrophosphate synthase [Xylella fastidiosa 9a5c]
gi|42560017|sp|Q9PEH8|UPPS_XYLFA RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|9105994|gb|AAF83860.1|AE003942_4 undecaprenyl pyrophosphate synthetase [Xylella fastidiosa 9a5c]
Length = 255
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 133/227 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R PR GHR G++ V E GIK LT+FAFS NW R
Sbjct: 13 PRHIAIIMDGNGRWAERRSRPRTTGHRAGVKAAMRTVDFCLEKGIKMLTLFAFSSENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+++ +G L + ++VR IG R D ++ + +AE T N L
Sbjct: 73 PADEVNFLMEMSIKLFGRGIEELHRRGVQVRFIGERKRFDIALVEHMTKAEHLTANNQRL 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y R +I+ A + + QD+ +G + +D L+ +++ +D+P PD+ IRT G
Sbjct: 133 ILSLAVSYGGRQDITMAARALAQDVAAGRLKPEQIDEDLLGQHMALADLPPPDMFIRTSG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
R+S+FLLWQ+AY+E F WP+F+ + AL+ Y R+RRFG
Sbjct: 193 VIRISNFLLWQIAYTELWFTDVMWPEFNSTVLQQALDDYASRERRFG 239
>gi|239941030|ref|ZP_04692967.1| putative undecaprenyl phosphate synthetase [Streptomyces
roseosporus NRRL 15998]
gi|239987509|ref|ZP_04708173.1| putative undecaprenyl phosphate synthetase [Streptomyces
roseosporus NRRL 11379]
gi|291444470|ref|ZP_06583860.1| undecaprenyl pyrophosphate synthetase 2 [Streptomyces roseosporus
NRRL 15998]
gi|291347417|gb|EFE74321.1| undecaprenyl pyrophosphate synthetase 2 [Streptomyces roseosporus
NRRL 15998]
Length = 271
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 136/231 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ ++MDGNGRWA RGLPR GH+ G V +++ E+G+KNL+++AFS NW+R
Sbjct: 36 PQHVAVVMDGNGRWAKERGLPRTEGHKVGEGVVLDVLKGCIEMGVKNLSLYAFSTENWKR 95
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ + + I++R +G L ++ L+ A++QT+ N +
Sbjct: 96 SPDEVKFLMNFNRDVIRRRRDEMDELGIRIRWVGRMPKLWKSVVQELQVAQEQTKNNDAM 155
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L+ NY R EI+ A + I QD+ +G + V+ KY+ D+PD DL +R G
Sbjct: 156 TLYFCVNYGGRAEIADAAQRIAQDVAAGKLDPSKVNEKTFQKYIYYPDMPDVDLFVRPSG 215
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E+R S++L+WQ AY+E VF WPDF R + A +Y RDRRFGG +
Sbjct: 216 EQRTSNYLIWQSAYAEMVFQDVLWPDFDRRDLWRACLEYAQRDRRFGGAQE 266
>gi|308234871|ref|ZP_07665608.1| undecaprenyl pyrophosphate synthase [Gardnerella vaginalis ATCC
14018]
gi|311114392|ref|YP_003985613.1| Di-trans,poly-cis-decaprenylcistransferase [Gardnerella vaginalis
ATCC 14019]
gi|310945886|gb|ADP38590.1| Di-trans,poly-cis-decaprenylcistransferase [Gardnerella vaginalis
ATCC 14019]
Length = 264
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 85/229 (37%), Positives = 141/229 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+G+IMDGNGRWA RG+ R GH+ V + +A A E G++ L+++ FS NW+R
Sbjct: 33 PRHVGVIMDGNGRWAKERGMIRTEGHKAAEPVVFDTIAGAIEAGVRYLSLYTFSTENWKR 92
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + + + + + ++VR G R L ++ L++A++ T+ NT +
Sbjct: 93 SPQEVHFLMGFSRDIIHRRVAQMNEWGVRVRWAGRRPKLWKSVIDELEKAQEITKNNTTI 152
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
++ NY R EI+ A I ++++SG + + +IA++L D+PD DL+IRT G
Sbjct: 153 DVVFCLNYGGRAEIADACAAIAREVKSGKIKGDRISEKMIAEHLYNPDIPDCDLVIRTSG 212
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+R S+FL WQ +Y+E F+PE +PD+ RE + ++++Y RDRRFGG+
Sbjct: 213 EQRTSNFLPWQASYAELDFVPELFPDYGREALWRSIDRYAHRDRRFGGV 261
>gi|152967317|ref|YP_001363101.1| undecaprenyl diphosphate synthase [Kineococcus radiotolerans
SRS30216]
gi|151361834|gb|ABS04837.1| undecaprenyl diphosphate synthase [Kineococcus radiotolerans
SRS30216]
Length = 256
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 135/232 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I+MDGNGRWA RGLPR GH++G ++VA A EVG+ +++ +AFS NW+R
Sbjct: 22 PRHVAIVMDGNGRWANQRGLPRVEGHKRGEASLLDVVAGAIEVGVTHVSAWAFSTENWKR 81
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ + ++VR G R L ++ L+ AE+ T+ NT
Sbjct: 82 SPDEVRFLMGFNRDVIRRRRDEMNSWGVRVRWAGRRPRLWRSVIDELEAAEELTKDNTVC 141
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R E++ A + I D+ +G++ VD +A+YLD D+PD DL R+ G
Sbjct: 142 TLTMCVNYGGRAELADAARAIALDVAAGTLNPARVDERTVARYLDEPDMPDVDLFWRSSG 201
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R S FL WQ AY+E VF WPD R + A+ Y RDRR+GG + K
Sbjct: 202 EQRTSGFLPWQAAYAEMVFSDTLWPDVDRRTLWAAIETYAERDRRYGGAADK 253
>gi|298253427|ref|ZP_06977219.1| undecaprenyl pyrophosphate synthetase [Gardnerella vaginalis 5-1]
gi|297532822|gb|EFH71708.1| undecaprenyl pyrophosphate synthetase [Gardnerella vaginalis 5-1]
Length = 264
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 85/229 (37%), Positives = 142/229 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+G+IMDGNGRWA RG+ R GH+ V +++A A E G++ L+++ FS NW+R
Sbjct: 33 PRHVGVIMDGNGRWAKERGMIRTEGHKAAEPVVFDVIAGAIEAGVRYLSLYTFSTENWKR 92
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + + + + + ++VR G R L ++ L++A++ T+ N +
Sbjct: 93 SPQEVRFLMGFSRDIIHRRVAQMNEWGVRVRWAGRRPRLWKSVIDELEKAQEITKNNKTI 152
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
++ NY R EI+ A I ++I++G + V +IA++L D+PD DL+IRT G
Sbjct: 153 DVVFCINYGGRAEIADACAQIAKEIQNGKIKGDRVSEKMIAEHLYNPDIPDCDLVIRTSG 212
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+R S+FL WQ +Y+E F+PE +PD+ RE+ + ++++Y RDRRFGG+
Sbjct: 213 EQRTSNFLPWQASYAELDFVPELFPDYGREVLWRSIDRYAHRDRRFGGV 261
>gi|326779463|ref|ZP_08238728.1| undecaprenyl diphosphate synthase [Streptomyces cf. griseus
XylebKG-1]
gi|326659796|gb|EGE44642.1| undecaprenyl diphosphate synthase [Streptomyces cf. griseus
XylebKG-1]
Length = 281
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 135/228 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ ++MDGNGRWA RGLPR GH+ G V +++ E+G+KNL+++AFS NW+R
Sbjct: 36 PQHVAVVMDGNGRWAKERGLPRTEGHKVGEGVVMDVLKGCIEMGVKNLSLYAFSTENWKR 95
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ + + I++R +G L ++ L+ A++QT+ N +
Sbjct: 96 SPDEVKFLMNFNRDVIRRRRDEMDELGIRIRWVGRMPKLWKSVVQELQVAQEQTKDNDRM 155
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L+ NY R EI+ A + I QD+ +G + V+ AKY D+PD DL +R G
Sbjct: 156 TLYFCVNYGGRAEIADAAQRIAQDVAAGRLDPSKVNEKTFAKYTYYPDMPDVDLFVRPSG 215
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S++L+WQ AY+E VF WPDF R + A +Y RDRRFGG
Sbjct: 216 EQRTSNYLIWQSAYAEMVFQDVLWPDFDRRDLWRACLEYAQRDRRFGG 263
>gi|121606083|ref|YP_983412.1| undecaprenyl diphosphate synthase [Polaromonas naphthalenivorans
CJ2]
gi|120595052|gb|ABM38491.1| Undecaprenyl pyrophosphate synthetase [Polaromonas
naphthalenivorans CJ2]
Length = 250
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 134/232 (57%), Gaps = 2/232 (0%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S + P H+ IIMDGN RWAA R + R GH G +I+ A E G+ LT+FAFS
Sbjct: 8 SVAMPQHVAIIMDGNRRWAAKRSMLRALGHVSGARQVRQIIDACMERGVNYLTLFAFSTE 67
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW+RP E+S L+ L+ +L+K ++ + ++++V+G+ D + ++ + T
Sbjct: 68 NWQRPADEVSSLMGLLVHYLQKEVSAMHASGVRLKVVGDLNRFDGQLQSLMASGQALTAN 127
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N+ L L IA NY R ++ +A++ + SV D++ + Y PDPDL+I
Sbjct: 128 NSKLTLTIAANYGGRWDMMQAVQAWQAANPAQSVA--DMNEVALRPYFSMGYAPDPDLLI 185
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
RTGGE R+S+F+LWQVAY+E F WPDFS + HAL Y RDRRFG
Sbjct: 186 RTGGESRISNFMLWQVAYTELFFTDTLWPDFSAQSLDHALQWYQARDRRFGA 237
>gi|218532319|ref|YP_002423135.1| undecaprenyl pyrophosphate synthase [Methylobacterium
chloromethanicum CM4]
gi|218524622|gb|ACK85207.1| undecaprenyl diphosphate synthase [Methylobacterium
chloromethanicum CM4]
Length = 236
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 99/228 (43%), Positives = 134/228 (58%), Gaps = 11/228 (4%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H IIMDGNGRWA+ARGLPR AGHR G++ +V AA +GI LT++AFS +NWRRP
Sbjct: 12 HAAIIMDGNGRWASARGLPRGAGHRAGVKTIQRVVEAAPALGIGTLTLYAFSSDNWRRPA 71
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+ L++L++++L+ L ++ ++ VIG R L I ++ AE T L+L
Sbjct: 72 EEVGGLMRLLRAYLRGETDRLARSGTRLTVIGRRDRLPPGIPEAIERAEAATASGDRLHL 131
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA +YSSRD I A + + + + +L A D DL+IRTGGEK
Sbjct: 132 RIAVDYSSRDAILAAAARLGPE----GLSREGLSEALGADG-------DVDLLIRTGGEK 180
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RLSDFLLW+ AY+E F WPDF A+ + RDRRFGGL+
Sbjct: 181 RLSDFLLWEAAYAELHFTDRMWPDFGATDLAAAVADFTARDRRFGGLN 228
>gi|182438808|ref|YP_001826527.1| putative undecaprenyl phosphate synthetase [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|178467324|dbj|BAG21844.1| putative undecaprenyl phosphate synthetase [Streptomyces griseus
subsp. griseus NBRC 13350]
Length = 287
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 135/228 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ ++MDGNGRWA RGLPR GH+ G V +++ E+G+KNL+++AFS NW+R
Sbjct: 36 PQHVAVVMDGNGRWAKERGLPRTEGHKVGEGVVMDVLKGCIEMGVKNLSLYAFSTENWKR 95
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ + + I++R +G L ++ L+ A++QT+ N +
Sbjct: 96 SPDEVKFLMNFNRDVIRRRRDEMDELGIRIRWVGRMPKLWKSVVQELQVAQEQTKDNDRM 155
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L+ NY R EI+ A + I QD+ +G + V+ AKY D+PD DL +R G
Sbjct: 156 TLYFCVNYGGRAEIADAAQRIAQDVAAGRLDPSKVNEKTFAKYTYYPDMPDVDLFVRPSG 215
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S++L+WQ AY+E VF WPDF R + A +Y RDRRFGG
Sbjct: 216 EQRTSNYLIWQSAYAEMVFQDVLWPDFDRRDLWRACLEYAQRDRRFGG 263
>gi|325474925|gb|EGC78111.1| undecaprenyl pyrophosphate synthetase [Treponema denticola F0402]
Length = 227
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 95/225 (42%), Positives = 131/225 (58%), Gaps = 6/225 (2%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
HI I+MDGNGRWA RGLPR GH++G+ I A +++GI +T++ FS NW+R
Sbjct: 7 HIAIVMDGNGRWAKKRGLPRSMGHKEGLNTVKRITKAVSDLGIPYITLYIFSTENWKRTE 66
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+E+ L+ LIK LK NNI++ IGN L DI + D+T TG +
Sbjct: 67 AEVGFLMGLIKQHLKAELKFYADNNIRIEHIGNLSGLPQDIQDEINSVRDKTSAYTGTAI 126
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+ NY + DEI RAIK + D + S ++ + LDT +P DL+IRTGGEK
Sbjct: 127 VLGINYGAHDEILRAIKKLNSD----EIAS--INEESFSLKLDTGKIPPVDLLIRTGGEK 180
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RLS+FLLWQ AY+E F WPD++ E + A+ Y R+RR+G
Sbjct: 181 RLSNFLLWQSAYAELYFTDTLWPDWTVENLYEAIEDYKKRNRRYG 225
>gi|21672511|ref|NP_660578.1| undecaprenyl pyrophosphate synthetase [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
gi|25009546|sp|Q8K9S6|UPPS_BUCAP RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|21623132|gb|AAM67789.1| undecaprenyl pyrophosphate synthetase [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
Length = 249
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 104/228 (45%), Positives = 145/228 (63%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
HI IIMDGNGRWA RG R GH++G + +I+ A E IK LT++ FS NWRRP
Sbjct: 20 HIAIIMDGNGRWAEKRGKIRTLGHKEGFKTARKIIKYAVENNIKILTLYVFSRENWRRPK 79
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
EI+ L+KL LK +L K NI++++IG+ ++++ + + E QT NTGL L
Sbjct: 80 LEITALMKLFFFALKSEIKNLNKYNIRLKIIGDTSPFNENLKNYIHKVEKQTFNNTGLIL 139
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA NYS R +I R IK I +D++ + + ++YL TS++ DL+IRTGGEK
Sbjct: 140 NIAANYSGRWDIIRGIKKIIKDVQKDVLDIDQIQERNFSQYLSTSELLPVDLVIRTGGEK 199
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
R+S+FLLWQ+AYSE F WPDF+ F HA++ + R+RRFGG+S
Sbjct: 200 RISNFLLWQIAYSELYFTDILWPDFNWRDFQHAIDYFFTRERRFGGIS 247
>gi|301632805|ref|XP_002945471.1| PREDICTED: undecaprenyl pyrophosphate synthase-like [Xenopus
(Silurana) tropicalis]
Length = 239
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 134/232 (57%), Gaps = 7/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI I+MDGNGRWA+ R LPR GH++GIE V A E G++ LT+FAFS NW R
Sbjct: 8 PHHIAIVMDGNGRWASHRLLPRLVGHKQGIESLRRCVRACRERGVRVLTVFAFSSENWNR 67
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L+ L + L K +++ +G R L D + L ++E T NT L
Sbjct: 68 PQDEVSGLMELMAMALAREVPQLAKEGVRLHFVGERAGLSDKVRVGLAQSELATAHNTAL 127
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + FNY R +I++A + Q E + + + + + VPDPDL+IRTGG
Sbjct: 128 VLNVCFNYGGRWDIAQAAAALAQRGEP-------ITEASLHAAMAMAHVPDPDLLIRTGG 180
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ AYSE F +WPDF A+ Y R+RRFG S++
Sbjct: 181 EMRISNFLLWQAAYSELYFSARFWPDFDEAALDEAIAAYGARERRFGKTSEQ 232
>gi|227548797|ref|ZP_03978846.1| undecaprenyl pyrophosphate synthase [Corynebacterium
lipophiloflavum DSM 44291]
gi|227079127|gb|EEI17090.1| undecaprenyl pyrophosphate synthase [Corynebacterium
lipophiloflavum DSM 44291]
Length = 246
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 93/229 (40%), Positives = 135/229 (58%), Gaps = 1/229 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVG-IKNLTIFAFSINNWR 69
P HI ++MDGNGRWA RGL R GH++G V + V A E+G ++ L+ +AFS NWR
Sbjct: 12 PRHIAVVMDGNGRWAQQRGLKRTEGHKRGEAVLMDCVDACIELGTVEWLSAYAFSTENWR 71
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ L+ + L+ L N+++R G R L ++ L++AED TR NTG
Sbjct: 72 RSAEEVRFLMGFSRDVLRNRRDDLHDKNVRIRWAGRRPRLWRSVIRELEKAEDLTRDNTG 131
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L + NY R EI ++++ G + ++ +++L D+PD DL +R
Sbjct: 132 LTLVMCVNYGGRAEIVDGVRSLVDAAAQGQIRPGEITEDTFSQWLYQPDMPDVDLFLRPS 191
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GE+R S+FLLWQ AY+E V+ + WPDF+RE F A+ +Y RDRRFGG
Sbjct: 192 GEQRTSNFLLWQSAYAEMVYQEKLWPDFAREDLFAAVLEYTKRDRRFGG 240
>gi|307609307|emb|CBW98786.1| Undecaprenyl pyrophosphate synthetase [Legionella pneumophila 130b]
Length = 238
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/236 (38%), Positives = 144/236 (61%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M+ P HI ++MDGNGRWA +RGLPR GH+ G++ +I+ E I L++FAFS
Sbjct: 1 MNHKLPQHIAVVMDGNGRWAESRGLPRVEGHKAGLDSVKKIINCCLEKKISCLSLFAFSS 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RPV+E++ L++L L+K L ++ I+++ G+R L + + +AE T+
Sbjct: 61 ENWSRPVTEVNFLMELFLEALRKEIDDLNQHGIRLKFTGDREPLSQVLQKQMSDAEALTK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N L L + NY + +I A + + + + G + +++ ++ A++LDT+ +P+PDL
Sbjct: 121 NNQQLILNVVVNYGGKWDIVTAARKLIRTVLDGKLAYDEINEAVFAQFLDTNGMPEPDLF 180
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
IRT GE R+S+F LWQ+AY+E F +WPDF+ F AL + R RRFG +S+
Sbjct: 181 IRTSGELRISNFFLWQLAYTELYFTDVHWPDFNEHEFELALISFAKRARRFGQISQ 236
>gi|170016986|ref|YP_001727905.1| undecaprenyl diphosphate synthase [Leuconostoc citreum KM20]
gi|169803843|gb|ACA82461.1| Undecaprenyl diphosphate synthase [Leuconostoc citreum KM20]
Length = 316
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 99/233 (42%), Positives = 136/233 (58%), Gaps = 3/233 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R +PR AGH+ G+ +I AA+++G+K LT++AFS NW R
Sbjct: 75 PNHIAIIMDGNGRWAKKRLMPRVAGHKIGMNTVKKIATAASDLGVKVLTLYAFSTENWSR 134
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+KL F + L KNNI+V V+GN L + + A QT TG+
Sbjct: 135 PNDEVSFLMKLPIDFFNEFVPDLIKNNIRVNVMGNIAQLPAETQRAVNRAIAQTAGGTGM 194
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT---SDVPDPDLIIR 187
L A NY + EI K I + G + D+D+ L A L T ++ PDL+IR
Sbjct: 195 ILNFALNYGGQIEIVSTAKKIATMVAEGLIKPEDIDAKLFADSLQTGTLGELAAPDLMIR 254
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
T GE RLS+F+ +Q AY+E F WPD++ + A+ + RDRRFGGL+
Sbjct: 255 TSGELRLSNFMPYQSAYAELYFTNVLWPDYTADDLVEAIASFTARDRRFGGLN 307
>gi|326692546|ref|ZP_08229551.1| undecaprenyl diphosphate synthase [Leuconostoc argentinum KCTC
3773]
Length = 259
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 96/234 (41%), Positives = 135/234 (57%), Gaps = 3/234 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
PDHI IIMDGNGRWA R +PR AGH+ G I AA+++G+K LT++AFS NW R
Sbjct: 20 PDHIAIIMDGNGRWAKKRMMPRIAGHKTGTNTVKRIATAASDLGVKVLTLYAFSTENWSR 79
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L++L F L KNNI+V V+GN L + ++ A QT TG+
Sbjct: 80 PNDEVNFLMQLPIDFFNDFVPDLIKNNIRVEVMGNIAQLPEGTQRAVQNAITQTAGGTGM 139
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS---DVPDPDLIIR 187
L A NY + EI A K + Q + +G + D+ + L T+ + PDL+IR
Sbjct: 140 VLNFALNYGGQIEIVEAAKQLAQQVSAGDLDPADITPENFSAALQTAALGALAAPDLLIR 199
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
T GE RLS+F+ +Q AY+E F WPD++ + A+ + RDRRFGGL++
Sbjct: 200 TSGELRLSNFMPYQAAYAELYFTDVLWPDYTADDLLAAIASFTQRDRRFGGLNE 253
>gi|299769702|ref|YP_003731728.1| undecaprenyl pyrophosphate synthetase [Acinetobacter sp. DR1]
gi|298699790|gb|ADI90355.1| undecaprenyl pyrophosphate synthetase [Acinetobacter sp. DR1]
Length = 250
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 142/232 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGN R+A + + GHR+G V + IV + GI+ LT+FAFS NW R
Sbjct: 10 PKHVAIIMDGNNRFAKKNQMQKGDGHREGKNVLDPIVEHCKKTGIRALTVFAFSSENWNR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL++ + + +KK NI +R IG+R L ++ ++++AE QT + +
Sbjct: 70 PQYEVDLLMKLLEESIHEQIPRMKKFNIALRFIGDRSRLSSHLVALMEDAEQQTAHHDTM 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA +Y +I+ A K + + + G + ++ L KY+ +D+P DL+IRTGG
Sbjct: 130 TLTIAISYGGMWDIANAAKQVAEAVSRGEFSADQINVDLFEKYVSLNDLPAVDLLIRTGG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+ R+S+FLLWQ AY+E F WP+F+ + F HALN ++ R+RRFG S++
Sbjct: 190 DYRISNFLLWQAAYAELYFTEALWPEFTVKEFDHALNVFSGRERRFGKTSEQ 241
>gi|212696917|ref|ZP_03305045.1| hypothetical protein ANHYDRO_01480 [Anaerococcus hydrogenalis DSM
7454]
gi|212676207|gb|EEB35814.1| hypothetical protein ANHYDRO_01480 [Anaerococcus hydrogenalis DSM
7454]
Length = 259
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 94/237 (39%), Positives = 147/237 (62%), Gaps = 4/237 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+M +H+ II+DGNGRWA + +PR GH++G E +I A E GIK LT++AFS
Sbjct: 25 LMKEKELNHLAIILDGNGRWAKNKNMPRSMGHKEGSENVVDIALYAKEKGIKYLTLYAFS 84
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E++ L+KL+ F+K L +N +K+ +IG+ L + + + + T
Sbjct: 85 TENWKRPKIEVNYLMKLLAKFIKDKTKLLMENEVKLNIIGDISKLPEKTMRACLDVCELT 144
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ N L L +A NY R EI +A F+D+ + +D I+ YL T ++PDPDL
Sbjct: 145 KNNDQLVLNMAINYGGRSEIVKA----FKDMAKDGIDFEKIDEDDISNYLYTKNMPDPDL 200
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
+IRTGG+ R+S+FL++Q+AY+E+ F WPDFS++ A++ + RDRR+GGL++
Sbjct: 201 LIRTGGDLRISNFLIYQMAYTEYYFTDVLWPDFSKKDLDKAVDSFYGRDRRYGGLNE 257
>gi|325847017|ref|ZP_08169843.1| di-trans,poly-cis-decaprenylcistransferase [Anaerococcus
hydrogenalis ACS-025-V-Sch4]
gi|325480989|gb|EGC84034.1| di-trans,poly-cis-decaprenylcistransferase [Anaerococcus
hydrogenalis ACS-025-V-Sch4]
Length = 234
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 94/236 (39%), Positives = 146/236 (61%), Gaps = 4/236 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M +H+ II+DGNGRWA + +PR GH++G E +I A E GIK LT++AFS
Sbjct: 1 MKEKELNHLAIILDGNGRWAKNKNMPRSMGHKEGSENVVDIALYAKEKGIKYLTLYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP E++ L+KL+ F+K L +N +K+ +IG+ L + + + + T+
Sbjct: 61 ENWKRPKIEVNYLMKLLAKFIKDKTKLLMENEVKLNIIGDISKLPEKTMRACLDVCELTK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N L L +A NY R EI +A F+D+ + +D I+ YL T ++PDPDL+
Sbjct: 121 NNDQLVLNMAINYGGRSEIVKA----FKDMAKDGIDFEKIDEDDISNYLYTKNMPDPDLL 176
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
IRTGG+ R+S+FL++Q+AY+E+ F WPDFS++ A++ + RDRR+GGL++
Sbjct: 177 IRTGGDLRISNFLIYQMAYTEYYFTDVLWPDFSKKDLDKAVDSFYGRDRRYGGLNE 232
>gi|299532322|ref|ZP_07045715.1| undecaprenyl diphosphate synthase [Comamonas testosteroni S44]
gi|298719730|gb|EFI60694.1| undecaprenyl diphosphate synthase [Comamonas testosteroni S44]
Length = 245
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 98/242 (40%), Positives = 142/242 (58%), Gaps = 9/242 (3%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ S + + P HI +IMDGNGRWA R LPR AGH++G+E A E G++ LT+F
Sbjct: 1 MTSKKNGAVPRHIAVIMDGNGRWAKRRLLPRLAGHKQGVESLRRCARACVERGVQVLTVF 60
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+S L+ L+ + L K L ++ +++ +G+R L D + L EAE
Sbjct: 61 AFSSENWNRPQEEVSGLMSLLANALAKEVAQLSRDGVRLYFVGDRQGLSDKVREGLAEAE 120
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDSSLIAKYLDTSDVP 180
T NT L L + FNY R +I++A + + Q +E + ++D ++ + VP
Sbjct: 121 RITAHNTRLVLNVCFNYGGRWDIAQAAQKLVAQGLE---LTPENLDRAMALAH-----VP 172
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRTGGE R+S+FLLWQ AY+E F WPDF A+ + R+RRFG S
Sbjct: 173 DPDLMIRTGGETRISNFLLWQAAYTELFFSNALWPDFDEAALDEAIAVFGGRERRFGQTS 232
Query: 241 KK 242
++
Sbjct: 233 EQ 234
>gi|147833024|emb|CAN61894.1| hypothetical protein VITISV_028791 [Vitis vinifera]
Length = 592
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/229 (39%), Positives = 141/229 (61%), Gaps = 2/229 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ +IMDGN RWA RGLP +GH+ G+ E+V + GIK L++FAFS +NW R
Sbjct: 86 PEHVAVIMDGNVRWAQKRGLPAASGHQAGVRSLRELVGLCCKWGIKVLSVFAFSYDNWSR 145
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ LI+ +K + + I+V VIG+ L + + ++ + E+ T+ N+ L
Sbjct: 146 SEGEVGFLMSLIERVVKAELPNFGREGIRVSVIGDLSKLPEQLQKLIIDVEETTKENSRL 205
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT--SDVPDPDLIIRT 188
+A +YS + +I +A KNI ++ G + D++ SLI + L T ++ P PDL+IRT
Sbjct: 206 QFIVALSYSGQCDILQACKNIGXKVKDGLIEPEDINKSLIEQELQTNCTEFPFPDLLIRT 265
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
GE R+S+F+LWQ+AY+E F WPDF ++ F AL+ + R RR+G
Sbjct: 266 SGELRVSNFMLWQIAYTELCFFSTLWPDFGKDEFVEALSSFQKRQRRYG 314
>gi|88855028|ref|ZP_01129693.1| undecaprenyl pyrophosphate synthetase [marine actinobacterium
PHSC20C1]
gi|88815556|gb|EAR25413.1| undecaprenyl pyrophosphate synthetase [marine actinobacterium
PHSC20C1]
Length = 270
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 92/235 (39%), Positives = 140/235 (59%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S+ + P+HI I+MDGNGRWA ARGL R GH+ G ++VA A ++G+K+++++AF
Sbjct: 26 SLPKGAVPEHIAIVMDGNGRWANARGLTRVEGHKAGEASLLDVVAGAIQIGVKHVSVYAF 85
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW R E+ L+ + L + L + ++VR G R L ++ L+ AE
Sbjct: 86 STENWSRSPEEVRFLMGFNRDVLHRRRDQLNEWGVRVRWAGRRPRLWTSVIKELQFAEKL 145
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T N L L + NY R+EI+ A+++I D+ +G + V LI + L +PD D
Sbjct: 146 TDKNDTLTLTMCVNYGGRNEIADAVRSIADDVAAGKLKPSAVTEKLIQRRLYQPQLPDVD 205
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R+ GE+R+S+F+ WQ AY+E VF+ WPDF+RE ++A+ Y R RRFGG
Sbjct: 206 LFVRSSGEQRMSNFMPWQSAYAEMVFLDTLWPDFTREQLWYAIEIYAKRTRRFGG 260
>gi|294791414|ref|ZP_06756571.1| di-trans,poly-cis-decaprenylcistransferase [Scardovia inopinata
F0304]
gi|294457885|gb|EFG26239.1| di-trans,poly-cis-decaprenylcistransferase [Scardovia inopinata
F0304]
Length = 263
Score = 189 bits (479), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 85/229 (37%), Positives = 139/229 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+G+IMDGNGRWA RGL R GH+ V + +A A E G++ L+++ FS NW+R
Sbjct: 33 PQHVGVIMDGNGRWAQHRGLARTEGHKAAEPVVFDTIAGAIEAGVRYLSLYTFSTENWKR 92
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
SE+ L+ + + + + + ++VR G R L ++ L+ A ++T+ NT +
Sbjct: 93 SPSEVRFLMGFSRDIIHRRVDQMNEWGVRVRWSGRRPRLWKSVIDELEVAMEKTKHNTVM 152
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
++ NY R E++ A I +++ G + V ++A++L D+PD DL+IRT G
Sbjct: 153 DVVFCINYGGRAELADAAAQIAREVAEGKIKGDRVTEKMVAEHLYNPDIPDCDLVIRTSG 212
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+R S+FL W+ AY+E F+PE WPD R++ + ++++Y RDRRFGG+
Sbjct: 213 EQRTSNFLPWEAAYAELDFVPELWPDCGRQVLWRSIDRYCHRDRRFGGV 261
>gi|298529657|ref|ZP_07017060.1| undecaprenyl diphosphate synthase [Desulfonatronospira
thiodismutans ASO3-1]
gi|298511093|gb|EFI34996.1| undecaprenyl diphosphate synthase [Desulfonatronospira
thiodismutans ASO3-1]
Length = 233
Score = 189 bits (479), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 97/235 (41%), Positives = 135/235 (57%), Gaps = 4/235 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M + P HI IIMDGNGRWA GLPR GH++G IV + +GI++LT++AFS
Sbjct: 1 MQETLPRHIAIIMDGNGRWAGRHGLPRVEGHKQGTRSARAIVEESRRLGIQHLTLYAFSR 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+ L L+ FL +L + +I++ ++G L +L+ A ++TR
Sbjct: 61 ENWSRPRDEVDFLFNLLGEFLNGELPTLMRQDIRLNILGETGELPLATRKILQMACNRTR 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N + L +A NYS R EI RA + ++ + + +D +YL T+ PDPDL+
Sbjct: 121 SNQSMQLNLALNYSGRLEIQRACRL----MQEKGLDACQMDPREFGQYLYTAGQPDPDLV 176
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IRT GE R+S+FLL+Q AYSEF F WPDF AL Y R+RRFGG+
Sbjct: 177 IRTSGEYRISNFLLYQSAYSEFYFTETLWPDFDSGELHKALEDYRRRNRRFGGVE 231
>gi|254513847|ref|ZP_05125908.1| undecaprenyl pyrophosphate synthetase 1 [gamma proteobacterium
NOR5-3]
gi|219676090|gb|EED32455.1| undecaprenyl pyrophosphate synthetase 1 [gamma proteobacterium
NOR5-3]
Length = 236
Score = 189 bits (479), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 91/221 (41%), Positives = 127/221 (57%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGN RWA R LP AGHR G+E ++ A E G++ LT+FAFS NW RP+ E+
Sbjct: 1 MDGNNRWARQRSLPGVAGHRAGVEAVRGVMRACREHGVEVLTLFAFSSENWSRPLPEVRA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ L+ +L+ L ++N+++R IG R + ++ AE T NT + IA +
Sbjct: 61 LLALLSRYLRTEVKQLHEDNVRLRFIGKRSRFSAGLQRLITHAETVTAGNTAATVIIAVD 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y + +I+RA + + + G + D+ + L+ L D P PDL IRTGG+ R+S+F
Sbjct: 121 YGGQWDITRAARELASRCQQGELKPEDITAQLLQNTLSLGDFPRPDLCIRTGGDARISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
LLW AYSEF F P WPDF F AL Y R+RRFGG
Sbjct: 181 LLWDFAYSEFYFTPVLWPDFGELEFARALADYGKRERRFGG 221
>gi|284008515|emb|CBA75034.1| undecaprenyl pyrophosphate synthetase [Arsenophonus nasoniae]
Length = 251
Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 95/227 (41%), Positives = 139/227 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA G R GHR G E + V A E I++LT++AFS NW R
Sbjct: 15 PRHVAIIMDGNGRWAKLHGKLRIKGHRAGTEAVQKAVKFAIENEIQSLTLYAFSSENWSR 74
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+S L++L FL +L +N+K+ +IG+ + +K A + T NTGL
Sbjct: 75 PETEVSALMELFTWFLDDEVKNLNIHNVKLTIIGDIGRFKPKLQNRIKHAVELTANNTGL 134
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I+ A++ I + I++GS+ + +++ + +++ + P DL+IRTG
Sbjct: 135 QLNIAANYGGRWDITNAVRLIAEKIKAGSLLAENINEDTVNEFISLHEQPTVDLVIRTGR 194
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+FLLWQ+AY+EF F WPDF E F A+ +N R+RRFG
Sbjct: 195 EYRISNFLLWQIAYAEFYFTDVLWPDFDEEAFKSAIVAFNKRERRFG 241
>gi|229493210|ref|ZP_04387002.1| di-trans,poly-cis-decaprenylcistransferase [Rhodococcus
erythropolis SK121]
gi|229319941|gb|EEN85770.1| di-trans,poly-cis-decaprenylcistransferase [Rhodococcus
erythropolis SK121]
Length = 272
Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 89/229 (38%), Positives = 139/229 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ ++MDGNGRWA RGLPR AGH +G V + V E+G++ L+ +AFS NW+R
Sbjct: 43 PRHVALVMDGNGRWAQERGLPRTAGHERGEAVLMDTVCGCIEMGVEWLSAYAFSTENWKR 102
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ + + ++VR G + L ++ L+ AE+ T+ NT +
Sbjct: 103 SPDEVRFLMGFNRDVIRRRRDEMNEMGVRVRWAGRKPRLWASVIKELEIAEELTKNNTVM 162
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL + NY R EI+ A+K I + + +G + + + +AKYLD D+PD DL +R G
Sbjct: 163 NLTMCVNYGGRAEIADAVKEIAKRVAAGEINPDKITEATVAKYLDEPDMPDVDLFLRPSG 222
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+R S+FL+WQ AY+E V+ + +PDF R + A +Y RDRRFGG+
Sbjct: 223 EQRTSNFLIWQSAYAEMVYQEKLFPDFDRRDLWAACVEYASRDRRFGGV 271
>gi|226307199|ref|YP_002767159.1| undecaprenyl pyrophosphate synthase [Rhodococcus erythropolis PR4]
gi|226186316|dbj|BAH34420.1| undecaprenyl pyrophosphate synthase [Rhodococcus erythropolis PR4]
Length = 252
Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 89/229 (38%), Positives = 139/229 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ ++MDGNGRWA RGLPR AGH +G V + V E+G++ L+ +AFS NW+R
Sbjct: 23 PRHVALVMDGNGRWAQERGLPRTAGHERGEAVLMDTVCGCIEMGVEWLSAYAFSTENWKR 82
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ + + ++VR G + L ++ L+ AE+ T+ NT +
Sbjct: 83 SPDEVRFLMGFNRDVIRRRRDEMNEMGVRVRWAGRKPRLWASVIKELEIAEELTKNNTVM 142
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL + NY R EI+ A+K I + + +G + + + +AKYLD D+PD DL +R G
Sbjct: 143 NLTMCVNYGGRAEIADAVKEIAKRVAAGEINPDKITEATVAKYLDEPDMPDVDLFLRPSG 202
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+R S+FL+WQ AY+E V+ + +PDF R + A +Y RDRRFGG+
Sbjct: 203 EQRTSNFLIWQSAYAEMVYQEKLFPDFDRRDLWAACVEYASRDRRFGGV 251
>gi|283782941|ref|YP_003373695.1| di-trans,poly-cis-decaprenylcistransferase [Gardnerella vaginalis
409-05]
gi|283441106|gb|ADB13572.1| di-trans,poly-cis-decaprenylcistransferase [Gardnerella vaginalis
409-05]
Length = 264
Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 85/229 (37%), Positives = 141/229 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+G+IMDGNGRWA RG+ R GH+ V +++A A E G++ L+++ FS NW+R
Sbjct: 33 PRHVGVIMDGNGRWAKERGMIRTEGHKAAEPVVFDVIAGAIEAGVRYLSLYTFSTENWKR 92
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + + + + + ++VR G R L ++ L++A++ T+ N +
Sbjct: 93 SPQEVRFLMGFSREIIHRRVAQMNEWGVRVRWAGRRPRLWKSVIDELEKAQEITKNNKTI 152
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
++ NY R EI+ A I ++I++G + V +IA++L D+PD DL+IRT G
Sbjct: 153 DVVFCINYGGRAEIADACAQIAKEIQNGKIKGDRVSEKMIAEHLYNPDIPDCDLVIRTSG 212
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+R S+FL WQ +Y+E F+PE +PD+ RE + ++++Y RDRRFGG+
Sbjct: 213 EQRTSNFLPWQASYAELDFVPELFPDYGREALWRSIDRYAHRDRRFGGV 261
>gi|221066089|ref|ZP_03542194.1| undecaprenyl diphosphate synthase [Comamonas testosteroni KF-1]
gi|220711112|gb|EED66480.1| undecaprenyl diphosphate synthase [Comamonas testosteroni KF-1]
Length = 245
Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 98/242 (40%), Positives = 142/242 (58%), Gaps = 9/242 (3%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ S + + P HI +IMDGNGRWA R LPR AGH++G+E A E G++ LT+F
Sbjct: 1 MTSKKNGAVPRHIAVIMDGNGRWAKRRLLPRLAGHKQGVESLRRCARACVERGVQVLTVF 60
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+S L+ L+ + L K L ++ +++ +G+R L D + L EAE
Sbjct: 61 AFSSENWNRPQEEVSGLMSLLANALAKEVAQLSRDGVRLYFVGDRQGLSDKVREGLAEAE 120
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDSSLIAKYLDTSDVP 180
T NT L L + FNY R +I++A + + Q +E + ++D ++ + VP
Sbjct: 121 RITAHNTRLVLNVCFNYGGRWDIAQAAQKLVAQGLE---LSPENLDRAMALAH-----VP 172
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRTGGE R+S+FLLWQ AY+E F WPDF A+ + R+RRFG S
Sbjct: 173 DPDLMIRTGGETRISNFLLWQAAYTELFFSNALWPDFDEAALDEAIAVFGGRERRFGQTS 232
Query: 241 KK 242
++
Sbjct: 233 EQ 234
>gi|42527845|ref|NP_972943.1| undecaprenyl diphosphate synthase [Treponema denticola ATCC 35405]
gi|73920284|sp|Q73K76|UPPS_TREDE RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|41818673|gb|AAS12862.1| undecaprenyl diphosphate synthase [Treponema denticola ATCC 35405]
Length = 227
Score = 188 bits (478), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 96/225 (42%), Positives = 131/225 (58%), Gaps = 6/225 (2%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
HI I+MDGNGRWA RGLPR GH++G+ I A +++GI +T++ FS NW+R
Sbjct: 7 HIAIVMDGNGRWAKKRGLPRSMGHKEGLNTVKRITKAVSDLGIPYITLYIFSTENWKRTE 66
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+E+ L+ LIK LK NNI++ IGN L DI + D+T TG +
Sbjct: 67 AEVGFLMGLIKQHLKAELKFYADNNIRIEHIGNLSGLPQDIQDEINSVRDKTSAYTGTAI 126
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+ NY + DEI RAIK + D E S ++ + LDT +P DL+IRTGGEK
Sbjct: 127 VLGINYGAHDEILRAIKKLNSD-ELAS-----INEESFSLKLDTGKIPPVDLLIRTGGEK 180
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RLS+FLLWQ AY+E F WPD++ E + A+ Y R+RR+G
Sbjct: 181 RLSNFLLWQSAYAELYFTDTLWPDWTVENLYEAIEDYKKRNRRYG 225
>gi|120610507|ref|YP_970185.1| undecaprenyl pyrophosphate synthetase [Acidovorax citrulli AAC00-1]
gi|120588971|gb|ABM32411.1| Undecaprenyl pyrophosphate synthetase [Acidovorax citrulli AAC00-1]
Length = 247
Score = 188 bits (478), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 97/241 (40%), Positives = 137/241 (56%), Gaps = 9/241 (3%)
Query: 4 SMMSSSP--PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
SM ++SP P H+ I+MDGNGRWA R LPR AGH++G+E E G+ LT+F
Sbjct: 3 SMSAASPAVPHHVAIVMDGNGRWATRRFLPRLAGHKQGVEALKRCARDCVERGVAVLTVF 62
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+S L+ L+ L + L+K+ +++ +G R +L + + L +AE
Sbjct: 63 AFSSENWNRPADEVSGLMDLLAKALAREVPQLQKDGVRLHFVGERSTLSEKVRAGLAQAE 122
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T NT L L + FNY R +I++A + E + + + + + VPD
Sbjct: 123 AVTAHNTRLVLNVCFNYGGRWDIAQAASALAARGEP-------ITEASLHTAMGLAHVPD 175
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL+IRTGGE R+S+FLLWQ AYSE F WPDF A+ Y R+RRFG S+
Sbjct: 176 PDLVIRTGGEMRISNFLLWQCAYSELYFSDRLWPDFDGAALDQAIAAYGARERRFGKTSE 235
Query: 242 K 242
+
Sbjct: 236 Q 236
>gi|301169638|emb|CBW29239.1| undecaprenyl pyrophosphate synthase [Haemophilus influenzae 10810]
Length = 236
Score = 188 bits (478), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 95/234 (40%), Positives = 138/234 (58%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M ++ P H+ IIMDGNGRWA + R GH G+ + VA A ++G++ LT++AFS
Sbjct: 1 MDQTNIPKHVAIIMDGNGRWAKQKNKMRIFGHTYGVTAVRKAVAYARQIGVEVLTLYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP EIS L+ L L + L KNNI +++IG+ + + +K+AE+ T
Sbjct: 61 SENWSRPEQEISALMSLFMQALDREVKKLHKNNICLKIIGDVSRFSETLQEKIKKAENLT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NT L L IA NY +I +A K I + ++ + D+++S +L T + P DL
Sbjct: 121 EKNTALTLNIAANYGGCWDIIQAAKQIAEKVKKEEMSVSDINNSTFQHHLATQNAPPVDL 180
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+IRT GE+R+S+FLLWQ+AY+E F WPDF++ F A+ Y R RRFGG
Sbjct: 181 LIRTSGEQRISNFLLWQIAYAELYFSDVLWPDFNQLEFNRAIASYQQRHRRFGG 234
>gi|291530446|emb|CBK96031.1| Undecaprenyl pyrophosphate synthetase [Eubacterium siraeum 70/3]
gi|291557941|emb|CBL35058.1| Undecaprenyl pyrophosphate synthetase [Eubacterium siraeum V10Sc8a]
Length = 221
Score = 188 bits (478), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 94/222 (42%), Positives = 134/222 (60%), Gaps = 1/222 (0%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA RGLPR AGH +G +VF V ++GIK T +AFS NW+RP E+
Sbjct: 1 MDGNGRWAKKRGLPRKAGHSQGAKVFRRTVEDCRDIGIKYCTFYAFSTENWKRPKDEVDA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
++KL+ +L S+ + N ++ +G++ + DDDI L E E+ ++ N GL + +A N
Sbjct: 61 IMKLLVKYLDD-IRSMAQKNTRIIFLGDKSAFDDDIQARLVEIEEISKNNDGLYVLVALN 119
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y +DEI A K + +D + G V YL T +P DLIIR GE+R S+F
Sbjct: 120 YGGKDEILTAAKRLARDYKEGKVDLDGFTEDDFDNYLYTKGIPPVDLIIRPSGEQRTSNF 179
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
L+WQ AY+E +F+ WPDFS++ A ++Y R+RRFGGL
Sbjct: 180 LIWQGAYAELLFMDVLWPDFSKKDLIAACDEYARRNRRFGGL 221
>gi|328957402|ref|YP_004374788.1| undecaprenyl pyrophosphate synthase [Carnobacterium sp. 17-4]
gi|328673726|gb|AEB29772.1| undecaprenyl pyrophosphate synthase [Carnobacterium sp. 17-4]
Length = 270
Score = 188 bits (478), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 94/232 (40%), Positives = 138/232 (59%), Gaps = 3/232 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA + +PR AGH++G+ +I A+++G+K L+++AFS NW+R
Sbjct: 39 PHHIAIIMDGNGRWAQKKFMPRIAGHKEGMNTVKKITKRASQMGVKVLSLYAFSTENWKR 98
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L F L + N++V+V+G L +++A T+ NTG+
Sbjct: 99 PDDEVSFLMQLPVDFFDAFVPELMEQNVQVQVMGFTEQLPKHTREAVEKAIADTKQNTGM 158
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT---SDVPDPDLIIR 187
L A NY R E+ A K + + ++ G + D+ SL + L T D D D +IR
Sbjct: 159 VLNFALNYGGRSELIEASKVLAEKVKVGEIEVEDITESLFEESLMTHALKDYQDVDFMIR 218
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
T GE+R+S+F+LWQ AYSEF F + WPDF+ + A+ Y R RRFGGL
Sbjct: 219 TSGEERISNFMLWQNAYSEFYFSQDLWPDFNEQALEQAIGVYQKRHRRFGGL 270
>gi|32266592|ref|NP_860624.1| hypothetical protein HH1093 [Helicobacter hepaticus ATCC 51449]
gi|42559769|sp|Q7VH74|UPPS_HELHP RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|32262643|gb|AAP77690.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
Length = 237
Score = 188 bits (478), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 96/237 (40%), Positives = 140/237 (59%), Gaps = 4/237 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M S P HI +IMDGNGRWA +G R GH++G ++ +I AE GI LT++AFS
Sbjct: 1 MKPSYPQHIAVIMDGNGRWAKKQGKKRTQGHKEGAKIVRDITQWCAEKGIPYLTLYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP E+ L+KL++ +L KN+I+ RVIG+ + + + E E T+
Sbjct: 61 ENWKRPKIEVDFLMKLLEKYLHDEKPVYMKNHIRFRVIGDISVFNTRLKNAILELEHATQ 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIES---GSVCSHDVDSSLIAKYLDTSDVPDP 182
+T L +A NY SRDEI+R + + S+ S D+ S+I LDT+ +PD
Sbjct: 121 NHTKLTQILALNYGSRDEIARTFIKLAHTLTPHTLASLSSQDI-ISMINANLDTATLPDV 179
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
D++IRTGGEKR+S+F+LWQ +Y+E F P +P F + L ++ R RRFGG+
Sbjct: 180 DMLIRTGGEKRISNFMLWQASYAELFFTPTLFPSFGKNELNAMLEEFLQRQRRFGGV 236
>gi|111221454|ref|YP_712248.1| undecaprenyl pyrophosphate synthetase [Frankia alni ACN14a]
gi|111148986|emb|CAJ60666.1| undecaprenyl pyrophosphate synthetase (di-trans,
poly-cis-decaprenylcistransferase) [Frankia alni ACN14a]
Length = 265
Score = 188 bits (478), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 93/229 (40%), Positives = 140/229 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+GI+MDGNGRWA RGL R GH G + + V A E+G++ L+++AFS NW+R
Sbjct: 32 PRHVGIVMDGNGRWAKRRGLARTKGHEAGEDALFDCVEGAIELGVRWLSVYAFSTENWKR 91
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E++ L++ + + ++VR G R L +++ L+ +E++TR N L
Sbjct: 92 SPDEVAFLMRFTDGVFGRRIADMDALGVRVRWAGRRPRLWGNVIRRLESSEERTRDNDRL 151
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R EI+ A I +D+ G + + +D + +++YLD D+PD DL+IRT G
Sbjct: 152 TLVMCVNYGGRAEIADAAAAIARDVREGRLRADRIDEATVSRYLDEPDMPDLDLVIRTSG 211
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+RLS+FLLWQ AY+EF F+ WPDF R + A +Y RDRR+GG+
Sbjct: 212 EQRLSNFLLWQAAYAEFSFVETLWPDFDRRNLWQACEEYARRDRRYGGI 260
>gi|293609254|ref|ZP_06691556.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292827706|gb|EFF86069.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325122520|gb|ADY82043.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase)
[Acinetobacter calcoaceticus PHEA-2]
Length = 250
Score = 188 bits (478), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 142/232 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGN R+A + + GHR+G V + IV + GI+ LT+FAFS NW R
Sbjct: 10 PKHVAIIMDGNNRFAKKNQMQKGDGHREGKNVLDPIVEHCKKTGIRALTVFAFSSENWNR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL++ + + +KK NI +R IG+R L ++ ++++AE QT + +
Sbjct: 70 PQFEVDLLMKLLEETIHEQIPRMKKFNIALRFIGDRSRLPSHLVALMEDAEQQTAHHNTM 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA +Y +I+ A K + + + G + ++ L KY+ +D+P DL+IRTGG
Sbjct: 130 TLTIAVSYGGMWDIANAAKQVAEAVSRGEFGADQINVDLFEKYVSLNDLPAVDLLIRTGG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+ R+S+FLLWQ AY+E F WP+F+ + F HALN ++ R+RRFG S++
Sbjct: 190 DYRISNFLLWQAAYAELYFTDTLWPEFTVQEFDHALNVFSGRERRFGKTSEQ 241
>gi|148259002|ref|YP_001243587.1| undecaprenyl pyrophosphate synthase [Bradyrhizobium sp. BTAi1]
gi|146411175|gb|ABQ39681.1| Undecaprenyl pyrophosphate synthetase [Bradyrhizobium sp. BTAi1]
Length = 247
Score = 188 bits (478), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 100/227 (44%), Positives = 135/227 (59%), Gaps = 7/227 (3%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+GIIMDGNGRWA +GL R GH G+E +V AA + G+ LT++AFS +NWRRP
Sbjct: 17 HVGIIMDGNGRWATRQGLSRLRGHEAGVEAIRRVVEAAPDQGVGTLTLYAFSSDNWRRPR 76
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+E+ L+ L++ +L SL +N +++ VIG R L I + AE TR T L+L
Sbjct: 77 TEVMGLMALLRVYLASEVESLVRNGVRLSVIGRRDRLPGGIADAIGRAEAATRDGTTLHL 136
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA +YS+RD I A +D+++ + + S L+ DV DLIIRT GE+
Sbjct: 137 RIAVDYSARDAILHAAAKA-RDVDA---LTREAFSDLVTGEAGLRDV---DLIIRTSGEQ 189
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLSDFLLW+ AY+E F WPDF E AL + R+RRFGGL
Sbjct: 190 RLSDFLLWEGAYAELHFTQRMWPDFDAEDLAQALTSFRGRERRFGGL 236
>gi|260913175|ref|ZP_05919657.1| di-trans,poly-cis-decaprenylcistransferase [Pasteurella dagmatis
ATCC 43325]
gi|260632762|gb|EEX50931.1| di-trans,poly-cis-decaprenylcistransferase [Pasteurella dagmatis
ATCC 43325]
Length = 239
Score = 188 bits (478), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 95/228 (41%), Positives = 131/228 (57%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA +G R GH+ GI + VA A +VG+K LT++AFS NW R
Sbjct: 10 PQHIAIIMDGNGRWAKQKGKMRIFGHKNGINAVRDAVAYARKVGVKVLTLYAFSSENWNR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L L L KNNI++ ++G+ + + + +AE T NT L
Sbjct: 70 PEQEVSALMNLFMQALDLEVKKLHKNNIRLNILGDITGFSEKLQQKIIQAEKLTENNTAL 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY +I +A K + + ++ + D+ L ++L T P DL+IRT G
Sbjct: 130 TLNIAANYGGCWDIVQAAKQLAEQVKDNQIAVSDITPELFQQHLVTKSQPQVDLLIRTSG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R+S+FLLWQ+AY+E F WPDF+ F A+ Y R RRFGG
Sbjct: 190 EQRISNFLLWQLAYAELYFTDVLWPDFNESEFERAILVYQQRHRRFGG 237
>gi|260654953|ref|ZP_05860441.1| di-trans,poly-cis-decaprenylcistransferase [Jonquetella anthropi
E3_33 E1]
gi|260630268|gb|EEX48462.1| di-trans,poly-cis-decaprenylcistransferase [Jonquetella anthropi
E3_33 E1]
Length = 230
Score = 188 bits (478), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 93/233 (39%), Positives = 136/233 (58%), Gaps = 6/233 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M+ S P H+ +IMDGNGRWA R LPR GHR G+ +V + GI+ L+++AFS
Sbjct: 1 MIGSRKPAHVAVIMDGNGRWAKRRHLPRLLGHRAGVGALERLVRSMKGSGIRYLSVYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP E++ L+KL + K+ ++ ++VR G R +L D+ ++ E +T
Sbjct: 61 TENWNRPQQEVNGLMKLFAFYAKRKIRAMAAEGLRVRFAGRRDNLSSDLQSLISWCEAET 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
++L + FNY R EI A++ ++G + D + ++L DVPDPDL
Sbjct: 121 AGGAEMDLIVCFNYGGRQEIIDAVQAA---QKAGCEIRTEED---MKRFLYLPDVPDPDL 174
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+IRT GE RLS+FLLWQ +YSEF F WPDF+ + F AL+ + RDRR+G
Sbjct: 175 VIRTSGEMRLSNFLLWQCSYSEFYFTDVLWPDFTPQEFQKALSAFAERDRRYG 227
>gi|213965791|ref|ZP_03393983.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
amycolatum SK46]
gi|213951550|gb|EEB62940.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
amycolatum SK46]
Length = 239
Score = 188 bits (478), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 92/227 (40%), Positives = 136/227 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI ++MDGNGRWA RGL R GH++G V E V A E+G+K+L+ +AFS NW R
Sbjct: 11 PNHIALVMDGNGRWAQQRGLKRTEGHKRGEAVLMECVDACLEMGVKHLSAYAFSTENWHR 70
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
V E+ L+ + L++ L N++VR G R L ++ L+ AE+QT+ N L
Sbjct: 71 SVDEVRFLMGFNRDVLRRRRDELDSKNVRVRWAGRRPRLWRSVIKELEIAEEQTKDNDAL 130
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L++ NY R EI A + I + +G + +D+ A++LD +PD DL +R G
Sbjct: 131 TLYMCVNYGGRAEIVDAAREIARQAAAGELSEYDLTEKSFAQFLDEPTMPDVDLFLRPSG 190
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+R S+FL+WQ AY+E V+ + +PDF R+ A+ +Y RDRRFG
Sbjct: 191 EQRTSNFLIWQSAYAEMVYQDKLFPDFGRDDMRAAVVEYAKRDRRFG 237
>gi|110639780|ref|YP_679990.1| undecaprenyl pyrophosphate synthetase [Cytophaga hutchinsonii ATCC
33406]
gi|110282461|gb|ABG60647.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) [Cytophaga
hutchinsonii ATCC 33406]
Length = 260
Score = 188 bits (478), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 96/237 (40%), Positives = 143/237 (60%), Gaps = 1/237 (0%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGL-PRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
SS P+HI IIMDGNGRWA +GL R GH+ I E A++G+K LT++AFS
Sbjct: 18 SSKLPEHIAIIMDGNGRWAKKQGLLNRIFGHKSAITSVREATETCAQLGVKYLTLYAFST 77
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E++ L++L+ S +K +L KN I++ IG+ SL L E +QT+
Sbjct: 78 ENWNRPKEEVNALMELLVSTIKSETPTLNKNKIRLNAIGDLASLPLSCQKELSETIEQTK 137
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
NTG+ L +A +YS R EI AIK + ++ S + ++ + ++L +PDP+L+
Sbjct: 138 HNTGVVLTLALSYSGRWEILEAIKKLTASVKDQSFDINSLNENTFRQFLSDKTLPDPELL 197
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRT GE R+S+FLLWQ+AY+E WPDF + + A+ + R+RRFG +S++
Sbjct: 198 IRTSGEFRVSNFLLWQIAYTEIHITDVLWPDFRKNDLYKAIVDFQKRERRFGKISEQ 254
>gi|16272857|ref|NP_439080.1| hypothetical protein HI0920 [Haemophilus influenzae Rd KW20]
gi|145632298|ref|ZP_01788033.1| UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
[Haemophilus influenzae 3655]
gi|145634088|ref|ZP_01789799.1| UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
[Haemophilus influenzae PittAA]
gi|145641887|ref|ZP_01797461.1| hypothetical protein CGSHiR3021_11219 [Haemophilus influenzae
R3021]
gi|148826436|ref|YP_001291189.1| hypothetical protein CGSHiEE_07415 [Haemophilus influenzae PittEE]
gi|229844025|ref|ZP_04464166.1| hypothetical protein CGSHi6P18H1_06296 [Haemophilus influenzae
6P18H1]
gi|229845971|ref|ZP_04466083.1| hypothetical protein CGSHi7P49H1_03953 [Haemophilus influenzae
7P49H1]
gi|260580009|ref|ZP_05847839.1| di-trans,poly-cis-decaprenylcistransferase [Haemophilus influenzae
RdAW]
gi|1175330|sp|P44938|UPPS_HAEIN RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|1573941|gb|AAC22578.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
gi|144987205|gb|EDJ93735.1| UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
[Haemophilus influenzae 3655]
gi|145268532|gb|EDK08525.1| UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
[Haemophilus influenzae PittAA]
gi|145273366|gb|EDK13238.1| hypothetical protein CGSHiR3021_11219 [Haemophilus influenzae
22.4-21]
gi|148716596|gb|ABQ98806.1| hypothetical protein CGSHiEE_07415 [Haemophilus influenzae PittEE]
gi|229810975|gb|EEP46692.1| hypothetical protein CGSHi7P49H1_03953 [Haemophilus influenzae
7P49H1]
gi|229813019|gb|EEP48707.1| hypothetical protein CGSHi6P18H1_06296 [Haemophilus influenzae
6P18H1]
gi|260093293|gb|EEW77226.1| di-trans,poly-cis-decaprenylcistransferase [Haemophilus influenzae
RdAW]
gi|309973584|gb|ADO96785.1| Undecaprenyl pyrophosphate synthetase [Haemophilus influenzae
R2846]
Length = 239
Score = 188 bits (478), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 94/228 (41%), Positives = 135/228 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA + R GH G+ + VA A ++G++ LT++AFS NW R
Sbjct: 10 PKHVAIIMDGNGRWAKQKNKMRIFGHTNGVTAVRKAVAYARQIGVEVLTLYAFSSENWSR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EIS L+ L L + L KNNI +++IG+ + + +K+AE+ T NT L
Sbjct: 70 PEQEISALMSLFMQALDREVKKLHKNNICLKIIGDVSRFSETLQEKIKKAENLTEKNTAL 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY +I +A K I + ++ + D+++S +L T + P DL+IRT G
Sbjct: 130 TLNIAANYGGCWDIIQAAKQIAEKVKKEEMSVSDINNSTFQHHLATQNAPPVDLLIRTSG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R+S+FLLWQ+AY+E F WPDF++ F A+ Y R RRFGG
Sbjct: 190 EQRISNFLLWQIAYAELYFSDVLWPDFNQLEFNRAIASYQQRHRRFGG 237
>gi|262279361|ref|ZP_06057146.1| undecaprenyl pyrophosphate synthetase [Acinetobacter calcoaceticus
RUH2202]
gi|262259712|gb|EEY78445.1| undecaprenyl pyrophosphate synthetase [Acinetobacter calcoaceticus
RUH2202]
Length = 250
Score = 188 bits (477), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 142/232 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGN R+A + + GHR+G V + IV + GI+ LT+FAFS NW R
Sbjct: 10 PKHVAIIMDGNNRFAKKNQMQKGDGHREGKNVLDPIVEHCKKTGIRALTVFAFSSENWNR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL++ + + +K+ NI +R IG+R L ++ ++++AE QT + +
Sbjct: 70 PQYEVDLLMKLLEESIHEQIPRMKEFNIALRFIGDRSRLSSHLVALMEDAEQQTAHHDTM 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA +Y +I+ A K + Q + G + ++ L KY+ +D+P DL+IRTGG
Sbjct: 130 TLTIAISYGGMWDIANAAKQVAQAVSRGEFGADQINVDLFEKYVSLNDLPAVDLLIRTGG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+ R+S+FLLWQ AY+E F WP+F+ + F HALN ++ R+RRFG S++
Sbjct: 190 DYRISNFLLWQAAYAELYFTDTLWPEFTVKEFDHALNVFSGRERRFGKTSEQ 241
>gi|90961539|ref|YP_535455.1| undecaprenyl pyrophosphate synthetase [Lactobacillus salivarius
UCC118]
gi|90820733|gb|ABD99372.1| Undecaprenyl pyrophosphate synthetase [Lactobacillus salivarius
UCC118]
Length = 260
Score = 188 bits (477), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 139/237 (58%), Gaps = 7/237 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R LPR AGH++G+E I A+ +G+K LT++AFS NW+R
Sbjct: 24 PNHIAIIMDGNGRWAKKRHLPRIAGHKQGMETVKNITKVASNLGVKVLTLYAFSTENWKR 83
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L F L +NN++V V+G L + +A +QT TG+
Sbjct: 84 PDKEVDFLMDLPVKFFNTFVPELIENNVRVNVMGYIDMLPKKTQKAVYDAIEQTSNCTGM 143
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDI-----ESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
L A NY R E+ AI++I + E + VD++L+ L + DPDL+
Sbjct: 144 VLNFALNYGGRAELVSAIQSIASKVSENKLEIEKITEKVVDANLMTGKL--APYNDPDLL 201
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRT GE+R+S+FLLWQ+AYSEFVF WPD+S E + + RDRRFG L ++
Sbjct: 202 IRTSGEERISNFLLWQLAYSEFVFTDTLWPDYSEEDLLANIYTFQTRDRRFGRLKEE 258
>gi|52840748|ref|YP_094547.1| undecaprenyl pyrophosphate synthase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|73920265|sp|Q5ZY69|UPPS_LEGPH RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|52627859|gb|AAU26600.1| undecaprenyl diphosphate synthetase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 238
Score = 188 bits (477), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 90/236 (38%), Positives = 144/236 (61%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M+ P HI ++MDGNGRWA +RGLPR GH+ G++ +I+ E I L++FAFS
Sbjct: 1 MNHKLPQHIAVVMDGNGRWAESRGLPRVEGHKAGLDSVKKIINCCLEKKISCLSLFAFSS 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RPV+E++ L++L L+K L ++ I+++ G+R L + + +AE T+
Sbjct: 61 ENWSRPVTEVNFLMELFLEALRKEIDDLNQHGIRLKFTGDREPLSQILQKQMCDAEALTK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N L L + NY + +I A + + + + G + +++ ++ A++LDT+ +P+PDL
Sbjct: 121 NNQQLILNVVVNYGGKWDIVTAARKLIRTVLDGKLAYDEINEAVFAQFLDTNGMPEPDLF 180
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
IRT GE R+S+F LWQ+AY+E F +WPDF+ F AL + R RRFG +S+
Sbjct: 181 IRTSGELRISNFFLWQLAYTELYFTDVHWPDFNEHEFELALISFAKRARRFGQISQ 236
>gi|253687342|ref|YP_003016532.1| undecaprenyl diphosphate synthase [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251753920|gb|ACT11996.1| undecaprenyl diphosphate synthase [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 253
Score = 188 bits (477), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 91/235 (38%), Positives = 141/235 (60%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ + P H+ IIMDGNGRWA +RG R GH+ G++ V+ A G+ LT++AFS
Sbjct: 12 LPPAGPRHVAIIMDGNGRWAKSRGKMRIFGHQAGVKAVRRSVSFAVSQGLDALTLYAFSS 71
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+S L++L L SL K+N+++RVIG+ + ++ +E T
Sbjct: 72 ENWNRPAQEVSALMELFVRALDSEVKSLHKHNVRLRVIGDIGRFSPRLQERIRRSEALTE 131
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N GL L IA NY R +I + ++ + + ++ G + ++ + + +Y+ +D+ DL+
Sbjct: 132 KNQGLTLNIAANYGGRWDIIQGVRQLAEQVQEGILRPDSINEASLCQYICLNDLAPVDLV 191
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IRTGGE R+S+FLLWQ+AY+E F WPDF ++F ALN + R+RRFGG +
Sbjct: 192 IRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQVFEGALNAFAQRERRFGGTT 246
>gi|125625173|ref|YP_001033656.1| UPP synthetase [Lactococcus lactis subsp. cremoris MG1363]
gi|124493981|emb|CAL98979.1| UPP synthetase [Lactococcus lactis subsp. cremoris MG1363]
gi|300071982|gb|ADJ61382.1| undecaprenyl pyrophosphate synthase [Lactococcus lactis subsp.
cremoris NZ9000]
Length = 244
Score = 188 bits (477), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 99/233 (42%), Positives = 136/233 (58%), Gaps = 8/233 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HIGIIMDGNGRWA +G PR GH+ G++ ++ A GIK +T++AFS NW R
Sbjct: 15 PEHIGIIMDGNGRWAKKKGKPRIFGHKAGMDSLKDVAVHGARRGIKVMTVYAFSTENWTR 74
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
PV E+ ++ L F K LK+ NI++R+IG R + L + A +T NTG+
Sbjct: 75 PVDEVKFIMSLPIDFYSKYVPVLKEENIQIRMIGERAGMPKATLDSIDRAARETSENTGM 134
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R +I AI+ + +SG S + L +K+L T+ +P DPDLII
Sbjct: 135 ILNFAMNYGGRRDIILAIQEL---AKSGQDLSTLTEEDL-SKHLQTAVLPENLRDPDLII 190
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE+R+S+FL WQ AYSE F WPDF A+ + RDRR+GG+
Sbjct: 191 RTSGEQRMSNFLTWQSAYSELYFAQTAWPDFDEAELDKAIAAFQKRDRRYGGV 243
>gi|317490130|ref|ZP_07948619.1| di-trans,poly-cis-decaprenylcistransferase [Eggerthella sp.
1_3_56FAA]
gi|325833614|ref|ZP_08166063.1| di-trans,poly-cis-decaprenylcistransferase [Eggerthella sp. HGA1]
gi|316910835|gb|EFV32455.1| di-trans,poly-cis-decaprenylcistransferase [Eggerthella sp.
1_3_56FAA]
gi|325485538|gb|EGC88007.1| di-trans,poly-cis-decaprenylcistransferase [Eggerthella sp. HGA1]
Length = 259
Score = 188 bits (477), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 91/236 (38%), Positives = 140/236 (59%), Gaps = 3/236 (1%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+++ P H+ +IMDGNGRWA RG R GH+ GIE E + A++VG++ LTI++FS
Sbjct: 23 AAAVPQHVAVIMDGNGRWAKERGKNRLFGHKAGIEAVRETIRCASDVGVRYLTIYSFSSE 82
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW+RP E+ L+ L + + L + +++V IG L +A ++T+
Sbjct: 83 NWKRPQDEVIGLMNLFATTMLAEVDGLHEEHVRVMTIGRTDELPKKTRDAFAKAWEKTKD 142
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD---VDSSLIAKYLDTSDVPDPD 183
N G+ L +A NY R E+ A+++ + + + + ++++L T+D+PDPD
Sbjct: 143 NDGMTLVVAVNYGGRVELLDAMRSYMDGAHAALREGREPEPLSEATLSRHLYTADIPDPD 202
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
L+IRT GE R+S+FLLWQ+AYSEFV WPDF R F AL ++ RDRRFG +
Sbjct: 203 LLIRTSGEMRVSNFLLWQIAYSEFVCTETLWPDFDRYEFLRALLEFQSRDRRFGAV 258
>gi|260581746|ref|ZP_05849543.1| di-trans,poly-cis-decaprenylcistransferase [Haemophilus influenzae
NT127]
gi|260095339|gb|EEW79230.1| di-trans,poly-cis-decaprenylcistransferase [Haemophilus influenzae
NT127]
Length = 239
Score = 188 bits (477), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 94/228 (41%), Positives = 135/228 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA + R GH G+ + VA A ++G++ LT++AFS NW R
Sbjct: 10 PKHVAIIMDGNGRWAKQKNKMRIFGHTNGVTAVRKAVAYARQIGVEVLTLYAFSSENWSR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EIS L+ L L + L KNNI +++IG+ + + +K+AE+ T NT L
Sbjct: 70 PEQEISALMSLFMQALDREVKKLHKNNICLKIIGDVSRFSETLQEKIKKAENLTEKNTAL 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY +I +A K I + ++ + D+++S +L T + P DL+IRT G
Sbjct: 130 TLNIAANYGGCWDIIQAAKQIAEKVKKEEMSVSDINNSTFQHHLATQNAPPVDLLIRTSG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R+S+FLLWQ+AY+E F WPDF++ F A+ Y R RRFGG
Sbjct: 190 EQRISNFLLWQIAYAELYFSDVLWPDFNQLEFNRAIASYQQRHRRFGG 237
>gi|111018234|ref|YP_701206.1| di-trans,poly-cis-decaprenylcistransferase [Rhodococcus jostii
RHA1]
gi|110817764|gb|ABG93048.1| di-trans,poly-cis-decaprenylcistransferase [Rhodococcus jostii
RHA1]
Length = 231
Score = 188 bits (477), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 90/229 (39%), Positives = 138/229 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI ++MDGNGRWA RGLPR AGH +G V + V E+G++ L+ +AFS NW+R
Sbjct: 2 PRHIALVMDGNGRWAQERGLPRTAGHERGEAVLMDAVCGCIEMGVEWLSAYAFSTENWKR 61
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ + + ++VR G R L ++ L+ AE+ T+ NT +
Sbjct: 62 SPEEVRFLMGFNRDVIRRRRDEMHEMGVRVRWAGRRPKLWRSVIKELEIAEELTKHNTVM 121
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL + NY R EI+ A K I + + +G + + + +A+YLD D+PD DL +R G
Sbjct: 122 NLTMCVNYGGRAEIADAAKEIGRRVAAGQLDPEKITEATVARYLDEPDMPDVDLFLRPSG 181
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+R S+FL+WQ AY+E V+ + +PDF R + A +Y RDRRFGG+
Sbjct: 182 EQRTSNFLIWQSAYAEMVYQEKLFPDFDRRDLWAACVEYASRDRRFGGV 230
>gi|157413563|ref|YP_001484429.1| undecaprenyl pyrophosphate synthase [Prochlorococcus marinus str.
MIT 9215]
gi|157388138|gb|ABV50843.1| Undecaprenyl pyrophosphate synthetase (UPPS) [Prochlorococcus
marinus str. MIT 9215]
Length = 267
Score = 188 bits (477), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 131/229 (57%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +GLPR GH++G+ V +I+ AA +G K +T++AFS NW R
Sbjct: 24 PKHVAIIMDGNGRWATRKGLPRSFGHKQGVSVLKKILKAAKNLGCKVITVYAFSTENWTR 83
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L LK + + + K++ IG+ ++ ++ AE T+ N
Sbjct: 84 PTKEVDFLLNLFSEVLKNEIEEIHEESTKIKFIGDLTPFPKNLKEIISNAESLTKNNNKF 143
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ NY R EI +A K + +G + +++ L L T + DP+L+IRT G
Sbjct: 144 LFNVCVNYGGRQEIVKAAKKLALKSSTGEIKPSEINEELFNSELLTGGIKDPELLIRTSG 203
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
EKR+S+FLLWQ+AYSE WP+F+ F A+ Y R+RRFGG+
Sbjct: 204 EKRISNFLLWQLAYSEIYISDVLWPEFNEHEFLKAIIDYQSRNRRFGGI 252
>gi|118496844|ref|YP_897894.1| undecaprenyl pyrophosphate synthetase [Francisella tularensis
subsp. novicida U112]
gi|194324472|ref|ZP_03058244.1| undecaprenyl-diphosphate synthase [Francisella tularensis subsp.
novicida FTE]
gi|208780539|ref|ZP_03247878.1| undecaprenyl diphosphate synthase [Francisella novicida FTG]
gi|118422750|gb|ABK89140.1| undecaprenyl pyrophosphate synthetase [Francisella novicida U112]
gi|194321307|gb|EDX18793.1| undecaprenyl-diphosphate synthase [Francisella tularensis subsp.
novicida FTE]
gi|208743514|gb|EDZ89819.1| undecaprenyl diphosphate synthase [Francisella novicida FTG]
Length = 257
Score = 188 bits (477), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 95/225 (42%), Positives = 138/225 (61%), Gaps = 1/225 (0%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA +R PR GHR + + + E I+ LT+FAF +NW RP
Sbjct: 28 HLAIIMDGNGRWAKSRLKPRIFGHRNSVSSVDATIEYCVENNIEMLTLFAFGRDNWLRPA 87
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+S+L+ L LK L NNI V V+G+R L D ++ +++ +E T+ NTGL L
Sbjct: 88 QEVSDLMDLFYKTLKDKTPKLHDNNIVVTVVGDRSRLSDKLIGMIEYSESLTKSNTGLKL 147
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A +Y+ R +I A + I ++++ G + D+D ++ AKYL ++P DL+IRT GE
Sbjct: 148 RLAVDYAGRWDIVEATRAIAREVDIGKLSVDDIDQNIFAKYLVGGNMP-VDLLIRTSGEV 206
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RLSDF+LWQ+AY+E F WPDFS++ A+ + R RRFG
Sbjct: 207 RLSDFMLWQLAYAEMYFTDIMWPDFSKQELTRAVEYFYSRQRRFG 251
>gi|239931394|ref|ZP_04688347.1| undecaprenyl phosphate synthetase [Streptomyces ghanaensis ATCC
14672]
gi|291439767|ref|ZP_06579157.1| undecaprenyl pyrophosphate synthetase 1 [Streptomyces ghanaensis
ATCC 14672]
gi|291342662|gb|EFE69618.1| undecaprenyl pyrophosphate synthetase 1 [Streptomyces ghanaensis
ATCC 14672]
Length = 277
Score = 188 bits (477), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 90/228 (39%), Positives = 135/228 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ I+MDGNGRWA RGLPR GH+ G E +++ A E+G+ ++++AFS NW+R
Sbjct: 35 PNHVAIVMDGNGRWAKERGLPRTEGHKVGAERVLDVLQGAIEMGVGAISLYAFSTENWKR 94
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + F++K L + ++VR +G L + L+ A++QT+ N L
Sbjct: 95 SPDEVRFLMNFNRDFIRKSRDQLDELGVRVRWVGRMPKLWKSVAKELQIAQEQTKDNDRL 154
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L+ NY R EI+ A + + +D+ +G + V AKYL D+PD DL +R G
Sbjct: 155 TLYFCMNYGGRAEIADAAQALAEDVRAGRLDPSKVTEKTFAKYLYYPDMPDVDLFLRPSG 214
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S++LLWQ AY+E VF WPDF R + A ++ RDRRFGG
Sbjct: 215 EQRTSNYLLWQSAYAEMVFQDVLWPDFDRRDLWRACLEFASRDRRFGG 262
>gi|322434731|ref|YP_004216943.1| undecaprenyl diphosphate synthase [Acidobacterium sp. MP5ACTX9]
gi|321162458|gb|ADW68163.1| undecaprenyl diphosphate synthase [Acidobacterium sp. MP5ACTX9]
Length = 301
Score = 188 bits (477), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 96/246 (39%), Positives = 141/246 (57%), Gaps = 15/246 (6%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI-NNWR 69
P H+ IIMDGNGRWA R L R GH++G E +V A+ + + LT++AFS+ NN R
Sbjct: 29 PRHVAIIMDGNGRWAGKRTLKRFKGHQQGAESVQFVVETASRIDLPWLTLYAFSLENNLR 88
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP SE+S L+ L+KS+L + NN+++ IG L L +I ++ A ++T NTG
Sbjct: 89 RPKSEVSFLMTLLKSYLVGNVKRMNDNNVRMAYIGRTLGLPQEIQDTMQWASEETSKNTG 148
Query: 130 LNLFIAFNYSSRDEISRAIKNI--------------FQDIESGSVCSHDVDSSLIAKYLD 175
L +A NY SR EI A +++ +D+ +D + ++ L
Sbjct: 149 TTLTLALNYGSRSEIVDATRSLVEKLIDEAHHRGISLEDLLQVDSLDSRIDEAQLSANLY 208
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
T+ +PDPDL+IRT GE+R+S+FLLWQ+AYSE WPDF A+ + R+RR
Sbjct: 209 TAHMPDPDLVIRTSGEQRISNFLLWQIAYSEIFVTDRLWPDFRGVHLLEAIENFQHRERR 268
Query: 236 FGGLSK 241
+GGL +
Sbjct: 269 YGGLGE 274
>gi|163791593|ref|ZP_02185994.1| undecaprenyl diphosphate synthase [Carnobacterium sp. AT7]
gi|159873142|gb|EDP67245.1| undecaprenyl diphosphate synthase [Carnobacterium sp. AT7]
Length = 258
Score = 188 bits (477), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 138/232 (59%), Gaps = 3/232 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R +PR AGH++G+ ++ A+E+G+K L+++AFS NW+R
Sbjct: 27 PHHIAIIMDGNGRWAQKRFMPRIAGHKEGMNTVKKVTKRASEIGVKVLSLYAFSTENWKR 86
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L++L F L + N+KV+V+G L + +++A T NTG+
Sbjct: 87 PDEEVNFLMQLPVDFFDTFVPELMEQNVKVQVMGFTEKLPNHTRKAVEKAISDTEKNTGM 146
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD---PDLIIR 187
L A NY R E+ A K + + +++G + D+ SL + L T ++ + D +IR
Sbjct: 147 VLNFALNYGGRSELLEASKTLAEKVKTGEIDVEDITESLFEESLMTRNLEEYQNVDFMIR 206
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
T GE+R+S+F+LWQ AYSEF F WPDF + A+ Y R RRFGGL
Sbjct: 207 TSGEERISNFMLWQNAYSEFYFSKVLWPDFDEQALEDAIGIYQKRHRRFGGL 258
>gi|257458507|ref|ZP_05623644.1| di-trans,poly-cis-decaprenylcistransferase [Treponema vincentii
ATCC 35580]
gi|257444104|gb|EEV19210.1| di-trans,poly-cis-decaprenylcistransferase [Treponema vincentii
ATCC 35580]
Length = 224
Score = 188 bits (477), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 97/227 (42%), Positives = 132/227 (58%), Gaps = 8/227 (3%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
HI +IMDGNGRWA RGL R GH++G+E IV A +++ I +T++ FS NW+R
Sbjct: 2 QHIAVIMDGNGRWAEQRGLARTKGHQEGLEAAKRIVKAVSDLHIPYITLYVFSTENWKRT 61
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E+ L+ LI+ L+ NNIKV+ IGN +L I + + ++T TG
Sbjct: 62 EEEVGFLMGLIQKHLRAELAFYAANNIKVKHIGNAAALPRAIQTEIADIMEKTEHYTGTT 121
Query: 132 LFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ +A NY +DEI RA+K + Q +E+ + K LDT+ VP DL+IRTGG
Sbjct: 122 VQLAINYGGKDEIIRAVKKLSRQQLET-------LTEDAFEKLLDTAGVPPADLVIRTGG 174
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
EKRLS+FLLWQ AY+EF WPDF+ AL+ Y R RRFG
Sbjct: 175 EKRLSNFLLWQTAYAEFYSTDVLWPDFAPAHLMEALDAYGKRTRRFG 221
>gi|296284730|ref|ZP_06862728.1| undecaprenyl pyrophosphate synthase [Citromicrobium bathyomarinum
JL354]
Length = 226
Score = 187 bits (476), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 91/226 (40%), Positives = 145/226 (64%), Gaps = 9/226 (3%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA RGLPR GH++G+E ++V + GI+ LT++AFS NW+RP
Sbjct: 9 HVAIIMDGNGRWAKRRGLPRAMGHKRGVEAVRKLVRSLEGTGIECLTLYAFSSENWKRPE 68
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+S+L+ L++SF++ N ++++++G+ +LD DI+ +L++A ++T T +
Sbjct: 69 EEVSDLMNLMRSFIRSDLEEFVANGVRLKIVGDWRALDPDIVAMLEDALERTAGGTH-TV 127
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A NY S+ EI+ A + ++ G + ++ L T+D+P DL+IRT GE
Sbjct: 128 AVALNYGSQQEIAGAARAAAKE---GKITPEAIEHHLF-----TADLPPVDLLIRTSGEV 179
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
RLS+FLLWQ+AY+E +F+ WPDF E AL+ + R+RR+GG
Sbjct: 180 RLSNFLLWQMAYAEMIFVDTLWPDFGPEDLRKALDVFAKRERRYGG 225
>gi|22299306|ref|NP_682553.1| undecaprenyl pyrophosphate synthetase [Thermosynechococcus
elongatus BP-1]
gi|42559974|sp|Q8DI29|UPPS_THEEB RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|22295489|dbj|BAC09315.1| undecaprenyl pyrophosphate synthetase [Thermosynechococcus
elongatus BP-1]
Length = 251
Score = 187 bits (476), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 129/227 (56%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA R LPR GH++G++ +++ + GI+ LT +AFS NW R
Sbjct: 23 PRHVAVIMDGNGRWAKQRNLPRIMGHQRGVDTLKDLLRCCKDWGIEALTAYAFSTENWGR 82
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P+ E+ L+ L + L++ + +++ +G+ L + ++ A T N +
Sbjct: 83 PLPEVEFLMTLFEQVLRRELGEMVAEGVQIHFVGDLTCLPKSLQAEIERAVAATANNQKI 142
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY R EI A ++I +++G + D+D L ++L T +PDPDL+IRT G
Sbjct: 143 KFVVATNYGGRREIIHACRSIAAQVKAGLLDPADIDEVLFERHLYTGGLPDPDLLIRTSG 202
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+F LWQVAY+E WPDF R F AL Y R RRFG
Sbjct: 203 ELRISNFFLWQVAYAEIYVTKTLWPDFDRSAFHEALRDYQQRQRRFG 249
>gi|257792210|ref|YP_003182816.1| undecaprenyl diphosphate synthase [Eggerthella lenta DSM 2243]
gi|257476107|gb|ACV56427.1| undecaprenyl diphosphate synthase [Eggerthella lenta DSM 2243]
Length = 259
Score = 187 bits (476), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 137/232 (59%), Gaps = 3/232 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA RG R GH+ GIE E + A++VG++ LTI++FS NW+R
Sbjct: 27 PQHVAVIMDGNGRWAKERGKNRLFGHKAGIEAVRETIRCASDVGVRYLTIYSFSSENWKR 86
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L + + L + +++V IG L +A ++T+ N G+
Sbjct: 87 PQDEVIGLMNLFATTMLAEVDGLHEEHVRVMTIGRTDELPKKTRDAFAKAWEKTKDNDGM 146
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD---VDSSLIAKYLDTSDVPDPDLIIR 187
L +A NY R E+ A+++ + + + + ++++L T+D+PDPDL+IR
Sbjct: 147 TLVVAVNYGGRVELLDAMRSYMDGAHAALREGREPEPLSEATLSRHLYTADIPDPDLLIR 206
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
T GE R+S+FLLWQ+AYSEFV WPDF R F AL ++ RDRRFG +
Sbjct: 207 TSGEMRVSNFLLWQIAYSEFVCTETLWPDFDRYEFLRALLEFQSRDRRFGAV 258
>gi|322831593|ref|YP_004211620.1| undecaprenyl diphosphate synthase [Rahnella sp. Y9602]
gi|321166794|gb|ADW72493.1| undecaprenyl diphosphate synthase [Rahnella sp. Y9602]
Length = 252
Score = 187 bits (476), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 95/240 (39%), Positives = 140/240 (58%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S M S P H+ IIMDGNGRWA +G R GH+ G++ + V+ AA + LT++AF
Sbjct: 9 SDMYCSQPRHVAIIMDGNGRWAKRQGKMRVFGHKAGVKSVRKAVSFAASHHLDALTLYAF 68
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP E+S L++L L SL K+N+++RVIG+ + ++ +E
Sbjct: 69 SSENWNRPAQEVSALMELFVRALDSEVKSLHKHNVRLRVIGDVSRFSARLQERIRRSETM 128
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N GL L IA NY R +I + +K + +E+G++ + + L+ + S++ D
Sbjct: 129 TQNNDGLTLNIAANYGGRWDIIQGVKTLAGQVEAGTLRAEQITEELLNSAVCMSELAPVD 188
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
L+IRTGGE R+S+FLLWQ+AY+E F WPDF F AL + R+RRFGG + G
Sbjct: 189 LVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDENTFEGALTAFAQRERRFGGTTPIG 248
>gi|281492791|ref|YP_003354771.1| undecaprenyl pyrophosphate synthetase [Lactococcus lactis subsp.
lactis KF147]
gi|281376443|gb|ADA65929.1| Undecaprenyl pyrophosphate synthetase [Lactococcus lactis subsp.
lactis KF147]
gi|326407714|gb|ADZ64785.1| undecaprenyl pyrophosphate synthetase [Lactococcus lactis subsp.
lactis CV56]
Length = 244
Score = 187 bits (476), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 96/233 (41%), Positives = 138/233 (59%), Gaps = 8/233 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HIGIIMDGNGRWA +G PR GH+ G++ ++ A GIK +T++AFS NW R
Sbjct: 15 PEHIGIIMDGNGRWAKQKGKPRIFGHKAGMDSLKDVAVHGARRGIKVMTVYAFSTENWTR 74
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
PV E+ ++ L F K LK+ NI++R+IG R L L + A +T N G+
Sbjct: 75 PVDEVKFIMSLPIDFYSKYVPVLKEENIQIRMIGEREGLPKATLDSIDRAAQETSENDGM 134
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L A NY R +I AI+ + + + S+ + + ++K+L T+ +P DPDLII
Sbjct: 135 ILNFAMNYGGRRDIILAIQELAKSGQDLSLLTEEE----LSKHLQTAVLPENLRDPDLII 190
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE+R+S+FL WQ AYSE F WPDF + A++ + RDRR+GG+
Sbjct: 191 RTSGEQRMSNFLTWQSAYSELYFAQTAWPDFDDKELDKAISAFQKRDRRYGGV 243
>gi|240172988|ref|ZP_04751646.1| putative undecaprenyl pyrophosphate synthetase [Mycobacterium
kansasii ATCC 12478]
Length = 297
Score = 187 bits (476), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 138/227 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ I+MDGNGRWA RGL R GH+ G V +I A E+GIK L+++AFS NW+R
Sbjct: 69 PNHVAIVMDGNGRWATQRGLRRTEGHKMGEAVVIDIACGAIELGIKWLSLYAFSTENWKR 128
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ +LK+ +++R +G+R L ++ L AE T+ N +
Sbjct: 129 SAEEVRFLMGFNRDVVRRRRENLKEMGVRIRWVGSRPRLWRSVINELAVAEQMTKYNDVI 188
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ NY R EI+ A + I +++ +G + + S I++Y+ D+PD DL +RT G
Sbjct: 189 TINYCVNYGGRTEIADATRQIAREVAAGRLNPERISESTISRYMQRPDIPDVDLFLRTSG 248
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+R S+F+LWQ AY+E++F + WPD+ R + A +Y R+RRFG
Sbjct: 249 EQRSSNFMLWQAAYAEYIFQDKLWPDYDRRDLWAACEEYASRNRRFG 295
>gi|227326541|ref|ZP_03830565.1| undecaprenyl pyrophosphate synthetase [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 253
Score = 187 bits (476), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 138/230 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +RG R GH+ G++ V+ A G+ LT++AFS NW R
Sbjct: 17 PRHVAIIMDGNGRWAKSRGKMRIFGHQAGVKAVRRSVSFAVSQGLDALTLYAFSSENWNR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L L SL K+N+++RVIG+ + ++ +E T N GL
Sbjct: 77 PAQEVSALMELFVRALDSEVKSLHKHNVRLRVIGDIGRFSPRLQERIRRSEALTEKNQGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I + ++ + + ++ G + ++ + + +Y+ D+ DL+IRTGG
Sbjct: 137 TLNIAANYGGRWDIIQGVRQLAEQVQEGILRPDSINEASLCQYICLHDLAPVDLVIRTGG 196
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E R+S+FLLWQ+AY+E F WPDF ++F ALN + R+RRFGG +
Sbjct: 197 EHRISNFLLWQIAYAELYFTDVLWPDFDEQVFEGALNAFAQRERRFGGTT 246
>gi|297242777|ref|ZP_06926715.1| undecaprenyl pyrophosphate synthetase [Gardnerella vaginalis AMD]
gi|296888988|gb|EFH27722.1| undecaprenyl pyrophosphate synthetase [Gardnerella vaginalis AMD]
Length = 264
Score = 187 bits (476), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 85/229 (37%), Positives = 139/229 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+G+IMDGNGRWA RG+ R GH+ V +++A A E G++ L+++ FS NW+R
Sbjct: 33 PRHVGVIMDGNGRWAKERGMIRTEGHKAAEPVVFDVIAGAIEAGVRYLSLYTFSTENWKR 92
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + + + + + ++VR G R L ++ L++A++ T+ N +
Sbjct: 93 SPQEVRFLMGFSREIIHRRVAQMNEWGVRVRWAGRRPRLWKSVIDELEKAQEITKNNKTI 152
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
++ NY R EI+ A I ++I G + V +IA++L D+PD DL+IRT G
Sbjct: 153 DVVFCINYGGRAEIADACAQIAKEIRDGKIKGDRVSEKMIAEHLYNPDIPDCDLVIRTSG 212
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+R S+FL WQ +Y+E F+PE +PD+ RE + ++++Y RDRRFGG+
Sbjct: 213 EQRTSNFLPWQASYAELDFVPELFPDYGREALWRSIDRYAHRDRRFGGV 261
>gi|254382924|ref|ZP_04998280.1| undecaprenyl pyrophosphate synthetase 2 [Streptomyces sp. Mg1]
gi|194341825|gb|EDX22791.1| undecaprenyl pyrophosphate synthetase 2 [Streptomyces sp. Mg1]
Length = 273
Score = 187 bits (476), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 87/228 (38%), Positives = 136/228 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ ++MDGNGRWA RGLPR GH+ G V +++ E+G+KNL+++AFS NW+R
Sbjct: 35 PNHVAVVMDGNGRWAKERGLPRTEGHKVGEGVVLDVLKGCLEMGVKNLSLYAFSTENWKR 94
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ + + I++R +G + ++ L+ A++QT N +
Sbjct: 95 SPDEVRFLMNFNRDVIRRRRDEMNELGIRIRWVGRMPKMWKSVVQELQVAQEQTVDNDAM 154
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L+ NY R EI+ A + I +D+ +G + V+ AKY+ D+PD DL +R G
Sbjct: 155 TLYFCVNYGGRAEIADAAQAIARDVAAGRLDPSKVNEKTFAKYMYYPDMPDVDLFLRPSG 214
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S++LLWQ AY+E VF WPDF R + A +Y RDRRFGG
Sbjct: 215 EQRTSNYLLWQSAYAEMVFQDVLWPDFDRRNLWQACLEYAQRDRRFGG 262
>gi|327480158|gb|AEA83468.1| undecaprenyl diphosphate synthase [Pseudomonas stutzeri DSM 4166]
Length = 238
Score = 187 bits (476), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 89/224 (39%), Positives = 135/224 (60%)
Query: 14 IGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVS 73
+ IIMDGN RWA R LP AGH+ G++ ++ A+ G++ LT+FAFS NW+RP
Sbjct: 1 MAIIMDGNNRWAKRRLLPGVAGHKAGVDAVRAVIEVCADSGVEVLTLFAFSSENWQRPAD 60
Query: 74 EISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLF 133
E+ L++L S L++ L +N I++R+IG+R ++ + E E+ T N L
Sbjct: 61 EVGALMELFLSALRREARKLDENGIRLRIIGDRSRFHPELQAAMLEVEEMTAANHRFVLQ 120
Query: 134 IAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKR 193
+A NY + +I +A +++ + ++G + ++ +L YL T D+P PDL IRTGGE+R
Sbjct: 121 VAANYGGQWDILQAAQHLATEAQAGRLNPAEITPALFQSYLATGDMPLPDLCIRTGGERR 180
Query: 194 LSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+S+FLLWQ+AY+E F YWPDF AL + R RRFG
Sbjct: 181 ISNFLLWQLAYAELYFSDLYWPDFKHVAMRKALADFATRQRRFG 224
>gi|302560748|ref|ZP_07313090.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces
griseoflavus Tu4000]
gi|302478366|gb|EFL41459.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces
griseoflavus Tu4000]
Length = 280
Score = 187 bits (476), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 137/228 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ I+MDGNGRWA RGLPR GH+ G E +++ E+G+ ++++AFS NW+R
Sbjct: 35 PNHVAIVMDGNGRWAKERGLPRTEGHKVGAERVLDVLQGGVEMGVGAISLYAFSTENWKR 94
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + F++K +L + I+VR +G L + L+ A++QT+ N L
Sbjct: 95 SPDEVRFLMNFNRDFIRKTRDTLDELGIRVRWVGRMPKLWKSVAKELQVAQEQTKDNDRL 154
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L+ NY R EI+ A + + +D+++G + V+ + KY+ D+PD DL +R G
Sbjct: 155 TLYFCMNYGGRAEIADAAQALAEDVKAGRLDPGKVNEKTLQKYMYYPDMPDVDLFLRPSG 214
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S++LLWQ AY+E VF WPDF R + A ++ RDRRFGG
Sbjct: 215 EQRTSNYLLWQSAYAEMVFQDVLWPDFDRRDLWRACLEFASRDRRFGG 262
>gi|312959396|ref|ZP_07773913.1| di-trans-poly-cis-decaprenylcistransferase [Pseudomonas fluorescens
WH6]
gi|311286113|gb|EFQ64677.1| di-trans-poly-cis-decaprenylcistransferase [Pseudomonas fluorescens
WH6]
Length = 251
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 137/232 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGN RWA R +P AGH+ G++ ++ AE ++ LT+FAFS NW+R
Sbjct: 13 PRHVAIIMDGNNRWAKKRFMPGVAGHKAGVDAVRAVIEVCAEAKVEVLTLFAFSSENWQR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L L++ L N I +R+IG+R ++ ++EAE T
Sbjct: 73 PADEVTALMDLFFKALRREAKRLNDNKISLRIIGDRSRFHPELQAAMREAEAITAGADRF 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY + +I++A + + +++++G + D+ L+ L T D+P PDL IRTGG
Sbjct: 133 VLQIAANYGGQWDIAQAAQRLAREVQAGHLRPDDITPELLQTCLVTGDLPLPDLCIRTGG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AY+E F +WPDF + AL + R RRFG S++
Sbjct: 193 EHRISNFLLWQLAYTELYFSDLFWPDFKHDAMRTALADFASRQRRFGKTSEQ 244
>gi|261822594|ref|YP_003260700.1| undecaprenyl diphosphate synthase [Pectobacterium wasabiae WPP163]
gi|261606607|gb|ACX89093.1| undecaprenyl diphosphate synthase [Pectobacterium wasabiae WPP163]
Length = 253
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 91/235 (38%), Positives = 140/235 (59%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ + P H+ IIMDGNGRWA RG R GH+ G++ V+ A G+ LT++AFS
Sbjct: 12 LPPAGPRHVAIIMDGNGRWAKNRGKMRIFGHQAGVKAVRRSVSFAVSQGLDALTLYAFSS 71
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+S L++L L SL K+N+++RVIG+ + ++ +E T
Sbjct: 72 ENWNRPAQEVSALMELFVRALDSEVKSLHKHNVRLRVIGDIGRFSPRLQERIRRSETLTE 131
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N GL L IA NY R +I + ++ + + ++ G + ++ + + +Y+ +D+ DL+
Sbjct: 132 KNQGLTLNIAANYGGRWDIIQGVRQLAEQVQEGILRPDSINEASLCQYICLNDLAPVDLV 191
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IRTGGE R+S+FLLWQ+AY+E F WPDF ++F ALN + R+RRFGG +
Sbjct: 192 IRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQVFEGALNAFAQRERRFGGTT 246
>gi|257461387|ref|ZP_05626483.1| di-trans,poly-cis-decaprenylcistransferase [Campylobacter gracilis
RM3268]
gi|257441110|gb|EEV16257.1| di-trans,poly-cis-decaprenylcistransferase [Campylobacter gracilis
RM3268]
Length = 225
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/228 (41%), Positives = 133/228 (58%), Gaps = 7/228 (3%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+H+ ++MDGNGRWA RGL R GH G EV +I + GI NLT++AFS NW+RP
Sbjct: 5 NHLALVMDGNGRWAKKRGLLRTGGHEAGAEVVEQICEFCIDEGIANLTLYAFSTENWKRP 64
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE+ L+KL++ FL +N IK IG+ + D+ ++ + T+ LN
Sbjct: 65 KSEVEFLMKLLQKFLISRREKFIQNGIKFHPIGDISAFSGDLRSEIEYLSNLTQNGRALN 124
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+A NY SRDEI RA + + E + + I +LDT+ D DL++RTGGE
Sbjct: 125 FNLAINYGSRDEIVRACERLLASGER-------LSEAGIGAHLDTAHSGDVDLLVRTGGE 177
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+RLS+FLLWQ +Y+E F P WPDF+RE ++ + + RRFGGL
Sbjct: 178 QRLSNFLLWQASYAELAFTPTLWPDFTREELARIVSDFRRKQRRFGGL 225
>gi|300775252|ref|ZP_07085114.1| Di-trans,poly-cis-decaprenylcistransferase [Chryseobacterium gleum
ATCC 35910]
gi|300505992|gb|EFK37128.1| Di-trans,poly-cis-decaprenylcistransferase [Chryseobacterium gleum
ATCC 35910]
Length = 252
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 92/231 (39%), Positives = 136/231 (58%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S + P H+ IIMDGNGRWA +RG R GH+ I + A E+ I LT++ FS
Sbjct: 13 SENLPKHVAIIMDGNGRWAKSRGEERTFGHKNAINAVRNAINACNEINIPYLTLYTFSSE 72
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP E++ L+ L+ L + +++ VIGN L + L+ + T+
Sbjct: 73 NWSRPAEEVNTLMNLLVETLLLEAEEIFSKGLRMHVIGNLDKLPPLVREQLERVVELTKE 132
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NT NL +A +Y S++EI A+KNI D++ G V +++ SL YL T D P DL+I
Sbjct: 133 NTKGNLVLAISYGSQNEILEAVKNISSDVKEGKVEIENINESLFESYLYTKDFPPVDLLI 192
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE R+S+FLLWQ+AY+E F+ WPDF++++FF + Y ++RR+G
Sbjct: 193 RTSGEIRISNFLLWQIAYAELQFLNVLWPDFTKDIFFQCIVDYQNKERRYG 243
>gi|113953314|ref|YP_730243.1| undecaprenyl pyrophosphate synthase [Synechococcus sp. CC9311]
gi|113880665|gb|ABI45623.1| undecaprenyl diphosphate synthase [Synechococcus sp. CC9311]
Length = 257
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 91/237 (38%), Positives = 138/237 (58%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A ++ P H+ +IMDGNGRWA +RGLPR GHR G+E + ++ G+K LT +A
Sbjct: 19 AELIPQRLPAHVAVIMDGNGRWAQSRGLPRVMGHRAGVEALKATLRRCSDWGVKALTAYA 78
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RP E++ L+ L + L++ +L+ +++R +G+ L + +++E+
Sbjct: 79 FSTENWSRPGDEVNFLMTLFERVLERELQALEAERVRIRFLGDLEPLPSRLQSLIEESTK 138
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
+T N G++ + NY R E+ A + + + SG + ++D +A L T+D DP
Sbjct: 139 RTASNDGIHFNVCTNYGGRHELVVAARRLAERAASGELDPSEIDERTLAGELFTADESDP 198
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DL+IRT GE R+S+FLLWQ+AY+E WPDF RE A Y R RRFGGL
Sbjct: 199 DLLIRTSGEHRISNFLLWQLAYAEIHVTDVLWPDFDREALVGAFLDYQSRTRRFGGL 255
>gi|260551689|ref|ZP_05825763.1| undecaprenyl pyrophosphate synthetase [Acinetobacter sp. RUH2624]
gi|260405432|gb|EEW98926.1| undecaprenyl pyrophosphate synthetase [Acinetobacter sp. RUH2624]
Length = 250
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 142/232 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGN R+A + + GHR+G + + IV + ++ LT+FAFS NW R
Sbjct: 10 PKHVAIIMDGNNRFAKKNQMQKGDGHREGKNILDPIVEHCIKTSVRALTVFAFSSENWNR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL++ + + +KK NI +R IG+R L ++ ++++AE QT + +
Sbjct: 70 PQYEVDLLMKLLEETIHEQIPRMKKFNIALRFIGDRSRLPSHLVALMEDAEQQTVHHDTM 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA +Y +I+ A K + Q + G + + ++ L KY+ +D+P DL+IRTGG
Sbjct: 130 TLTIAISYGGMWDIANAAKQVAQAVSRGEIDADQINVDLFEKYVSLNDLPAVDLLIRTGG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+ R+S+FLLWQ AY+E F WP+F+ E F HALN ++ R+RRFG S++
Sbjct: 190 DFRISNFLLWQAAYAELYFTDTLWPEFTVEEFDHALNVFSGRERRFGKTSEQ 241
>gi|125528434|gb|EAY76548.1| hypothetical protein OsI_04491 [Oryza sativa Indica Group]
Length = 228
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/224 (42%), Positives = 132/224 (58%), Gaps = 4/224 (1%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGN RWA ARGLP AGH G E V + GI+ LT FAFS NW RP E+
Sbjct: 1 MDGNARWARARGLPSAAGHEAGRRTLEETVRLSRAWGIRALTAFAFSNENWSRPKVEVDF 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L + + + I++RVIG+ L + + +EAE+ TR N+ L+L +A +
Sbjct: 61 LMRLFERVIHDSVAEFLREGIRLRVIGDSSRLPVSLQKIAREAEETTRNNSQLDLTLAIS 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS----DVPDPDLIIRTGGEKR 193
YS R +I +A + + Q ++S ++ + D+D +L A L+TS + P PDL+IRT GE R
Sbjct: 121 YSGRRDIVQACRKLAQKVQSKALAAEDIDEALFADELETSCAADEFPYPDLLIRTSGELR 180
Query: 194 LSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
LS+FLLWQ AYSE F WPDF + AL + RDRRFG
Sbjct: 181 LSNFLLWQSAYSELFFTNTLWPDFGEADYLEALCSFQSRDRRFG 224
>gi|82542773|ref|YP_406720.1| undecaprenyl pyrophosphate synthase [Shigella boydii Sb227]
gi|81244184|gb|ABB64892.1| conserved hypothetical protein [Shigella boydii Sb227]
Length = 253
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/226 (39%), Positives = 140/226 (61%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++AFS NW RP
Sbjct: 20 HVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPA 79
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+S L++L L SL ++N+++R+IG+ + + ++++E T NTGL L
Sbjct: 80 QEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQECIRKSEALTAGNTGLTL 139
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA NY R +I + ++ + + ++ G++ +D ++ +++ ++ DL+IRTGGE
Sbjct: 140 NIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGEH 199
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R+S+FLLWQ+AY+E FI WPDF + F ALN + R+RRFGG
Sbjct: 200 RISNFLLWQIAYAELYFIDVLWPDFDEQDFEGALNAFANRERRFGG 245
>gi|116327677|ref|YP_797397.1| undecaprenyl pyrophosphate synthase [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
gi|116330592|ref|YP_800310.1| undecaprenyl pyrophosphate synthase [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
gi|116120421|gb|ABJ78464.1| Undecaprenyl pyrophosphate synthase [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
gi|116124281|gb|ABJ75552.1| Undecaprenyl pyrophosphate synthase [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
Length = 241
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 92/236 (38%), Positives = 137/236 (58%), Gaps = 1/236 (0%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ S P HI +IMDGNGRWA + G PR GHR+G + ++ A+ E G+KN++++AFS
Sbjct: 3 LFESKFPQHIAVIMDGNGRWAVSLGKPRSEGHREGANAIDRLMDASLEFGLKNVSLYAFS 62
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRRP++EI + L+ F+ ++ I++ G+R L ++L + A ++T
Sbjct: 63 TENWRRPITEIRSIFNLLVEFIDTRLDTIHTRGIRIHHSGSRKRLTRNVLDKIDFAIEKT 122
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVC-SHDVDSSLIAKYLDTSDVPDPD 183
+ N LN+ NY S+DE+ RA + F + V + + K+L TS +P D
Sbjct: 123 KKNKNLNVNFCLNYGSKDELLRAAQEAFLRRKKEKVSFEKPLKEKELEKFLYTSTLPPVD 182
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
L+IRT GE+RLS+FLLWQ AY+E F WPDF + +L Y R R+FGGL
Sbjct: 183 LLIRTAGEQRLSNFLLWQSAYAELYFTDTLWPDFDKNSLVDSLKWYETRTRKFGGL 238
>gi|320010910|gb|ADW05760.1| undecaprenyl diphosphate synthase [Streptomyces flavogriseus ATCC
33331]
Length = 276
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 86/228 (37%), Positives = 137/228 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ ++MDGNGRWA RGLPR GH+ G V +++ E+G+KNL+++AFS NW+R
Sbjct: 36 PKHVAVVMDGNGRWAKERGLPRTEGHKVGEGVVMDVLKGCIEMGVKNLSLYAFSTENWKR 95
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ + + I++R +G L ++ L+ A++QT+ N +
Sbjct: 96 SPDEVKFLMNFNRDVIRRRRDEMDELGIRIRWVGRMPKLWKSVVQELQVAQEQTKDNDKM 155
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L+ NY R EI+ A + I +D+ +G + V+ AKY+ D+PD DL +R G
Sbjct: 156 TLYFCVNYGGRAEIADAAQRIAEDVAAGRLDPSKVNEKTFAKYIYYPDMPDVDLFVRPSG 215
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S++L+WQ AY+E VF WPDF R ++A ++ RDRRFGG
Sbjct: 216 EQRTSNYLIWQSAYAEMVFQDVLWPDFDRRDLWNACLEFARRDRRFGG 263
>gi|320186595|gb|EFW61320.1| Undecaprenyl pyrophosphate synthetase [Shigella flexneri CDC
796-83]
Length = 253
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/226 (39%), Positives = 140/226 (61%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++AFS NW RP
Sbjct: 20 HVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPA 79
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+S L++L L SL ++N+++R+IG+ + + ++++E T NTGL L
Sbjct: 80 QEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQECIRKSEALTAGNTGLTL 139
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA NY R +I + ++ + + ++ G++ +D ++ +++ ++ DL+IRTGGE
Sbjct: 140 NIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGEH 199
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R+S+FLLWQ+AY+E FI WPDF + F ALN + R+RRFGG
Sbjct: 200 RISNFLLWQIAYAELYFIDVLWPDFDEQDFEGALNAFANRERRFGG 245
>gi|78779486|ref|YP_397598.1| undecaprenyl pyrophosphate synthetase [Prochlorococcus marinus str.
MIT 9312]
gi|78712985|gb|ABB50162.1| Undecaprenyl pyrophosphate synthetase [Prochlorococcus marinus str.
MIT 9312]
Length = 267
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 87/229 (37%), Positives = 131/229 (57%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +GLPR GH++G+ V +I+ AA +G K +T++AFS NW R
Sbjct: 24 PKHVAIIMDGNGRWATRKGLPRSFGHKQGVSVLKKILKAAKNLGCKVITVYAFSTENWTR 83
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L LK + + + K++ IG+ ++ ++ +E T+ N
Sbjct: 84 PTKEVNFLINLFSEVLKNEIKEIHEESTKIKFIGDLTPFPKNLKEIISSSESLTKNNNKF 143
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ NY R EI + K + SG + +++ L L T + DP+L+IRT G
Sbjct: 144 LFNVCVNYGGRQEIVKVAKELALKSSSGEIKPSEINEELFNSELLTGGIKDPELLIRTSG 203
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
EKR+S+FLLWQ+AYSE WP+F+ F A+ Y R+RRFGG+
Sbjct: 204 EKRISNFLLWQLAYSEIYISDVLWPEFNEHEFLKAIIDYQSRNRRFGGI 252
>gi|332098764|gb|EGJ03724.1| di-trans,poly-cis-decaprenylcistransferase [Shigella boydii
3594-74]
Length = 252
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/226 (39%), Positives = 140/226 (61%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++AFS NW RP
Sbjct: 19 HVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPA 78
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+S L++L L SL ++N+++R+IG+ + + ++++E T NTGL L
Sbjct: 79 QEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQECIRKSEALTAGNTGLTL 138
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA NY R +I + ++ + + ++ G++ +D ++ +++ ++ DL+IRTGGE
Sbjct: 139 NIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGEH 198
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R+S+FLLWQ+AY+E FI WPDF + F ALN + R+RRFGG
Sbjct: 199 RISNFLLWQIAYAELYFIDVLWPDFDEQDFEGALNAFANRERRFGG 244
>gi|119898196|ref|YP_933409.1| undecaprenyl pyrophosphate synthetase [Azoarcus sp. BH72]
gi|119670609|emb|CAL94522.1| probable undecaprenyl pyrophosphate synthetase [Azoarcus sp. BH72]
Length = 266
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 97/237 (40%), Positives = 136/237 (57%), Gaps = 7/237 (2%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S+ P H+ IIMDGNGRWA R +PR AGH +G+E + A + G++ LT+FAFS N
Sbjct: 17 STVPRHVAIIMDGNGRWARKRFMPRIAGHTRGVESVRTTIRACMDRGVEYLTLFAFSSEN 76
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+S L++L LKK L +N I++R++G+ D ++ ++EAE T N
Sbjct: 77 WRRPADEVSFLMQLFIKSLKKEVGRLHQNGIRLRIVGDLERFDAPLIAAIREAEALTAAN 136
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIF--QDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
L IA NY R +I A+ + G+ + +A L S P+PDL
Sbjct: 137 DRFTLTIAANYGGRWDILNALNRLVARHPERQGAFSEEE-----LASELSMSFAPEPDLF 191
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTGGE+R+S+FLLWQ+AY+E F WPDF A+ Y R+RRFG S++
Sbjct: 192 IRTGGEQRISNFLLWQLAYAELYFTDTLWPDFDAAELDKAIAWYGARERRFGRTSEQ 248
>gi|50119976|ref|YP_049143.1| undecaprenyl pyrophosphate synthetase [Pectobacterium atrosepticum
SCRI1043]
gi|73920258|sp|Q6D8D8|UPPS_ERWCT RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|49610502|emb|CAG73947.1| undecaprenyl pyrophosphate synthetase [Pectobacterium atrosepticum
SCRI1043]
Length = 253
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 139/230 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +RG R GH+ G++ V+ A G+ LT++AFS NW R
Sbjct: 17 PRHVAIIMDGNGRWAKSRGKMRIFGHQAGVKAVRRSVSFAVNHGLDALTLYAFSSENWNR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L L SL K+N+++RVIG+ + ++ +E T N GL
Sbjct: 77 PAQEVSALMELFVRALDSEVKSLHKHNVRLRVIGDIGRFSPRLQERIRRSEVLTEKNQGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I + ++ + + ++ G + ++ + + +Y+ +D+ DL+IRTGG
Sbjct: 137 TLNIAANYGGRWDIIQGVRQLAEQVQEGILRPDSINEASLCQYICLNDLAPVDLVIRTGG 196
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E R+S+FLLWQ+AY+E F WPDF ++F ALN + R+RRFGG +
Sbjct: 197 EHRISNFLLWQIAYAELYFTDVLWPDFDEQVFEGALNAFAQRERRFGGTT 246
>gi|319793979|ref|YP_004155619.1| undecaprenyl diphosphate synthase [Variovorax paradoxus EPS]
gi|315596442|gb|ADU37508.1| undecaprenyl diphosphate synthase [Variovorax paradoxus EPS]
Length = 239
Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/240 (40%), Positives = 140/240 (58%), Gaps = 10/240 (4%)
Query: 6 MSSSPP---DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
M+SSPP H+ ++MDGNGRWA R LPR AGH++G+E V A A+ G+ LT+FA
Sbjct: 1 MASSPPPIPHHVAVVMDGNGRWATKRFLPRVAGHKQGVESLRRCVKACADRGVGVLTVFA 60
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RP E+S L+ L+ L + L ++ +++ +G R L ++ L AE+
Sbjct: 61 FSSENWNRPPDEVSGLMSLMVGALAREVPRLSRDGVRLHFVGERGGLSAKLVAGLVSAEE 120
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NT L L I FNY R +I++A + + + + ++D ++ + VPDP
Sbjct: 121 ATAHNTRLVLNICFNYGGRWDIAQAAAKLAE--QGLPMTEMNMDRAMALAH-----VPDP 173
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL IRTGGE+RLS+FLLWQ AY+E F + WP+F A+ + R+RRFG S +
Sbjct: 174 DLFIRTGGEQRLSNFLLWQSAYAELFFSDKLWPEFDEAALDEAIAAFQGRERRFGQTSAQ 233
>gi|299823043|ref|ZP_07054929.1| Di-trans,poly-cis-decaprenylcistransferase [Listeria grayi DSM
20601]
gi|299816572|gb|EFI83810.1| Di-trans,poly-cis-decaprenylcistransferase [Listeria grayi DSM
20601]
Length = 261
Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 97/229 (42%), Positives = 133/229 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R LPR AGH++G+EV I A+ + I LT++AFS NW+R
Sbjct: 33 PKHIAIIMDGNGRWAKKRFLPRIAGHKEGMEVVKRITKFASRLKIDVLTLYAFSTENWKR 92
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL F L +N+++ V+G R +L L ++ A T GL
Sbjct: 93 PEEEVDFLMKLPVEFFDTFVPDLIDHNVRINVMGYRENLPAHTLQAVENAIRDTAHCDGL 152
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY R EI A+K ++ ++ I +L ++ + DPDL+IRT G
Sbjct: 153 TLNFALNYGGRSEIVSAMKAAATEMLKQGKSIDSLNEEDIEAHLMSNGLGDPDLLIRTSG 212
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+F+LWQ+AYSEF F +WPDFS + A+ +Y R RR+GGL
Sbjct: 213 ELRLSNFMLWQLAYSEFYFTETHWPDFSEDDLTKAIMEYQQRSRRYGGL 261
>gi|326507232|dbj|BAJ95693.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 252
Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/240 (40%), Positives = 137/240 (57%), Gaps = 3/240 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + S P H+ ++MDGN RWA ARG+P GH G E V + GI+ LT
Sbjct: 9 LLRGLRPESLPRHVAVVMDGNSRWARARGMPPAFGHEAGRRALLETVRLSRAWGIRALTA 68
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW RP +E+ L+ L + ++ ++ +RVIG+ L + ++A
Sbjct: 69 FAFSHENWSRPKTEVDFLMGLFERVIRDSVAEFSRDGTCLRVIGDCSRLPASLQRTARDA 128
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT---S 177
E+ TR N+ L+L +A +YS R +I +A +++ Q + + D+D SL A L+T S
Sbjct: 129 EEATRNNSQLDLTLAISYSGRRDIVQACRSLAQKVRDELLRPEDIDESLFAGELETSRGS 188
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
++P PDL+IRT GE RLS+FLLWQ AYSE F WPDF + AL Y RDRRFG
Sbjct: 189 ELPCPDLLIRTSGEMRLSNFLLWQSAYSELFFTDTLWPDFGEADYLEALCSYQSRDRRFG 248
>gi|328675399|gb|AEB28074.1| Undecaprenyl pyrophosphate synthetase [Francisella cf. novicida
3523]
Length = 240
Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 93/225 (41%), Positives = 138/225 (61%), Gaps = 1/225 (0%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA +R PR GHR + + + E I+ LT+FAF +NW RP
Sbjct: 11 HLAIIMDGNGRWAKSRLKPRIFGHRNSVSSVDATIEYCVENNIEILTLFAFGRDNWLRPA 70
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+++L+ L LK L NNI + V+G+R L D ++ +++ +E T+ NTGL L
Sbjct: 71 QEVADLMDLFYKTLKDKTPKLHDNNIVLTVVGDRSRLSDKLISMIEYSESLTKSNTGLKL 130
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A +Y+ R +I A + I +++++G + ++D + AKYL D+P DL+IRT GE
Sbjct: 131 RLAVDYAGRWDIVEATRAIAREVDTGKLGVDEIDQNSFAKYLVGGDIP-VDLLIRTSGEV 189
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RLSDF+LWQ+AY+E F WPDFS++ A+ + R RRFG
Sbjct: 190 RLSDFMLWQLAYAEMYFTDIMWPDFSKQELIKAVEYFYSRQRRFG 234
>gi|124267164|ref|YP_001021168.1| undecaprenyl pyrophosphate synthetase [Methylibium petroleiphilum
PM1]
gi|124259939|gb|ABM94933.1| Undecaprenyl pyrophosphate synthetase [Methylibium petroleiphilum
PM1]
Length = 258
Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/218 (40%), Positives = 133/218 (61%), Gaps = 7/218 (3%)
Query: 3 ASMMSSSP---PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
AS +S +P P H+ ++MDGNGRWA+ R +PR GH++G++ V A A+ GI+ LT
Sbjct: 9 ASAVSQAPAAIPRHVAVVMDGNGRWASKRFMPRFVGHKQGVDALVRTVKACADRGIEYLT 68
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
+FAFS NW+RP E+S L+ L+ + K L K +++R++G+R ++ D + E
Sbjct: 69 VFAFSSENWKRPEEEVSGLMGLVLVAVSKYLAKLAKEGVRIRIVGDRDAVSDKVREAWAE 128
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV 179
AE T NT + L +AFNY R ++ +A + D + + ++ + + +Y+ S
Sbjct: 129 AERSTAHNTRITLSVAFNYGGRWDVLQACRQAIAD----GIPADQLNEARLGQYMALSHA 184
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDF 217
PDPDL IRTGGE R+S+FLLWQ AYSE F WPDF
Sbjct: 185 PDPDLFIRTGGEVRISNFLLWQAAYSELYFTDCLWPDF 222
>gi|15674112|ref|NP_268287.1| undecaprenyl pyrophosphate synthetase [Lactococcus lactis subsp.
lactis Il1403]
gi|42559874|sp|Q9CDT1|UPPS_LACLA RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|12725187|gb|AAK06228.1|AE006441_6 undecaprenyl pyrophosphate synthetase [Lactococcus lactis subsp.
lactis Il1403]
Length = 244
Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 93/229 (40%), Positives = 135/229 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HIGIIMDGNGRWA +G PR GH+ G++ ++ A GIK +T++AFS NW R
Sbjct: 15 PEHIGIIMDGNGRWAKQKGKPRIFGHKAGMDSLKDVAVHGARRGIKVMTVYAFSTENWTR 74
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
PV E+ ++ L F K LK+ NI++R+IG R L L + A +T N G+
Sbjct: 75 PVDEVKFIMSLPIDFYSKYVPVLKEENIQIRMIGEREGLPKATLDSIDRAAQETSENDGM 134
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY R +I AI+ + + + S+ + + S + + + ++ DPDLIIRT G
Sbjct: 135 ILNFAMNYGGRRDIILAIQELAKSGQDLSLLTEEELSKHLQTAVLSENLRDPDLIIRTSG 194
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+R+S+FL WQ AYSE F WPDF + A++ + RDRR+GG+
Sbjct: 195 EQRMSNFLTWQSAYSELYFAQTAWPDFDDKELDKAISAFQKRDRRYGGV 243
>gi|297160639|gb|ADI10351.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces
bingchenggensis BCW-1]
Length = 279
Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 86/228 (37%), Positives = 134/228 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ ++MDGNGRWA RGLPR GH+ G V +++ E+G+KNL+++AFS NW+R
Sbjct: 35 PKHVAVVMDGNGRWAKERGLPRTEGHKVGEGVVLDVLKGCLEIGVKNLSLYAFSTENWKR 94
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ + + I++R G L + L+ A++QT+ N +
Sbjct: 95 SPDEVRFLMNFNRDVIRRRRDEMDEMGIRIRWAGRMPKLWKSVAQELQVAQEQTKDNDAM 154
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
++ NY R EI+ A K + +D+ +G + V+ AKYL D+PD DL +R G
Sbjct: 155 TMYFCMNYGGRAEIADAAKALAEDVRAGRLDPSKVNEKTFAKYLYYPDMPDVDLFLRPSG 214
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S++L+WQ AY+E V+ WPDF R + A +Y RDRRFGG
Sbjct: 215 EQRTSNYLIWQSAYAEMVYQDVLWPDFDRRDLWRACLEYASRDRRFGG 262
>gi|291277537|ref|YP_003517309.1| undecaprenyl pyrophosphate synthetase [Helicobacter mustelae 12198]
gi|290964731|emb|CBG40586.1| undecaprenyl pyrophosphate synthetase [Helicobacter mustelae 12198]
Length = 228
Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/227 (42%), Positives = 139/227 (61%), Gaps = 4/227 (1%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA R PR GH+ G V EI A+ I LT++AFS NW+RP
Sbjct: 6 HLAIIMDGNGRWAKERKKPRKEGHKAGTNVVREITTWCAKNAITYLTLYAFSTENWKRPK 65
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+E+ L+KL+ +L+K + ++I + IGN + D + + E + T+ N L
Sbjct: 66 TEVRYLMKLLAQYLEKEKQTYLDHDICFKAIGNIEAFDLSLKEKIYELQSLTQNNKSLTQ 125
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A NY SRDEI+RA+K++ + S +++ L A+ LDT +PD DL+IRTGGE+
Sbjct: 126 ILALNYGSRDEITRALKDL---LLSPPQNLENLEEELNAR-LDTRGIPDVDLLIRTGGEQ 181
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
R+S+FLLWQ++Y+E F P YWP+FS + Y ++RRFGGL
Sbjct: 182 RISNFLLWQISYAELFFTPTYWPEFSTRELEQIIASYRQKNRRFGGL 228
>gi|88706579|ref|ZP_01104282.1| Undecaprenyl pyrophosphate synthetase [Congregibacter litoralis
KT71]
gi|88699075|gb|EAQ96191.1| Undecaprenyl pyrophosphate synthetase [Congregibacter litoralis
KT71]
Length = 236
Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 92/221 (41%), Positives = 127/221 (57%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGN RWA R LP AGHR G+E I+ A E GI+ LT+FAFS NW RP+ E+
Sbjct: 1 MDGNNRWARQRSLPGVAGHRAGVEAVRGIMRACREHGIEVLTLFAFSSENWSRPLPEVRS 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ L +L+ L ++N+++R IG R + ++ AE T NT + IA +
Sbjct: 61 LLALFSRYLRTEVKQLHEDNVRLRFIGKRSRFRPGLQRLINHAETVTANNTAATVVIAVD 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y + +I++A + + Q ++G + D+ ++ L D P PDL IRTGG+ R+S+F
Sbjct: 121 YGGQWDITQAAQTLAQRCQAGELDPGDITPEVLQSALSLGDFPSPDLCIRTGGDARISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
LLW AYSEF F P WPDF F AL Y R+RRFGG
Sbjct: 181 LLWDFAYSEFYFTPVLWPDFGELEFARALADYGKRERRFGG 221
>gi|307129825|ref|YP_003881841.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) [Dickeya
dadantii 3937]
gi|306527354|gb|ADM97284.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) [Dickeya
dadantii 3937]
Length = 253
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/230 (38%), Positives = 138/230 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG R GH+ G++ ++ A ++ LT++AFS NW R
Sbjct: 17 PRHVAIIMDGNGRWAKQRGKLRIFGHQAGVKSVRRAISYAVGQNLEALTLYAFSSENWNR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L L +L K+N+++RVIG+ + +++ +E T NTGL
Sbjct: 77 PAQEVSALMQLFVRVLDSEVKNLHKHNVRLRVIGDISRFSSRLQELIRRSEAVTENNTGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I ++ I + ++ G + +D S +++Y+ +D+ DL+IRT G
Sbjct: 137 TLNIAANYGGRWDIIHGVRKIAEQVQEGLLRPDTIDESTLSRYMCLNDLAPVDLLIRTSG 196
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E R+S+FLLWQ+AY+E F WPDF + F A++ + R+RRFGG +
Sbjct: 197 EHRISNFLLWQIAYAELYFTDVLWPDFDEQTFEGAIHAFTQRERRFGGTT 246
>gi|256832762|ref|YP_003161489.1| undecaprenyl diphosphate synthase [Jonesia denitrificans DSM 20603]
gi|256686293|gb|ACV09186.1| undecaprenyl diphosphate synthase [Jonesia denitrificans DSM 20603]
Length = 260
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/228 (41%), Positives = 140/228 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I+MDGNGRWA RGLPR GH+ G ++VA A E+GI++++++AFS NW+R
Sbjct: 24 PQHVAIVMDGNGRWANQRGLPRTEGHKAGEVALLDVVAGAIEMGIRHVSVYAFSTENWKR 83
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ K L++ ++ + ++VR G R L ++ L+EAE TR NT
Sbjct: 84 SPDEVRFLMGFNKEVLRRRRDTMNEWGVRVRWSGRRPRLWPSVVKELEEAEALTRSNTVC 143
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R EI+ A + +D+ +G + V ++A+YLD D+PD DL +R+ G
Sbjct: 144 TLNMCVNYGGRAEIADAAAALARDVAAGKLDPRKVSEKVLARYLDEPDLPDVDLFVRSSG 203
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S+F+LWQ AY+E VF+ WPDF R + A+ Y RDRR+GG
Sbjct: 204 EQRFSNFMLWQSAYAEMVFLNTLWPDFDRRTLWEAVGIYARRDRRYGG 251
>gi|134098080|ref|YP_001103741.1| undecaprenyl diphosphate synthase [Saccharopolyspora erythraea NRRL
2338]
gi|291007461|ref|ZP_06565434.1| undecaprenyl diphosphate synthase [Saccharopolyspora erythraea NRRL
2338]
gi|133910703|emb|CAM00816.1| undecaprenyl diphosphate synthase [Saccharopolyspora erythraea NRRL
2338]
Length = 290
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/228 (40%), Positives = 131/228 (57%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I+MDGNGRWA RGLPR GH++G V E+ A E+G+K L+++AFS NW+R
Sbjct: 35 PQHVAIVMDGNGRWANERGLPRIEGHKRGEAVVLELARGAIEIGVKWLSLYAFSTENWKR 94
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + + + L ++VR G + L ++ L++AE +TR N +
Sbjct: 95 SPEEVRFLMGFNRDVIARRVDELDGLGVRVRWAGRKPKLWRSVVKQLQDAEVRTRNNEVM 154
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL + NY R E+ A + I + G + VD +AKYL ++PD DL IR G
Sbjct: 155 NLTMCVNYGGRAEVGDAAREIARLAAQGKINPEKVDEQTVAKYLYQPEMPDVDLFIRPSG 214
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S+FLLWQ AY+E VF +PD R + A QY RDRRFGG
Sbjct: 215 EQRTSNFLLWQSAYAELVFQDTLFPDVDRTHLWRACEQYARRDRRFGG 262
>gi|172041006|ref|YP_001800720.1| hypothetical protein cur_1326 [Corynebacterium urealyticum DSM
7109]
gi|171852310|emb|CAQ05286.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
Length = 252
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 90/239 (37%), Positives = 139/239 (58%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+AS+ + P HI ++MDGNGRWA RGL R GH++G V +V E+G++ L+
Sbjct: 13 QIASLPTGLVPRHIALVMDGNGRWAQERGLARTEGHKRGESVLISLVEECLELGVEALSA 72
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NWRR E+ L+ + L+K L +++R +G R L ++ L+ A
Sbjct: 73 YAFSTENWRRSAEEVRFLMGFNRDVLRKQRDYLDSLGVRIRWVGRRPRLWRSVISELERA 132
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E+QT+ NT + L++ NY R EI+ A K + + G + DV ++YLD D+P
Sbjct: 133 EEQTKHNTRMTLYMCINYGGRAEIADAAKALVAEANQGRIKPRDVSEKDFSRYLDEPDMP 192
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
D DL +R GE+R S+FL+WQ AY+E V+ +PD++ A+ ++ RDRRFGG+
Sbjct: 193 DVDLFLRPSGEQRTSNFLIWQSAYAEMVYQQVLFPDYTPAHLRGAIWEFASRDRRFGGV 251
>gi|169633331|ref|YP_001707067.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase)
[Acinetobacter baumannii SDF]
gi|169152123|emb|CAP01022.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase)
[Acinetobacter baumannii]
Length = 250
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 141/232 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGN R+A + + GHR+G V + IV + G++ LT+FAFS NW R
Sbjct: 10 PQHVAIIMDGNNRFAKKNQMQKGDGHREGKNVLDPIVEHCVKTGVRALTVFAFSSENWNR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL++ + + +KK NI +R IG+R L ++ ++++AE QT + +
Sbjct: 70 PQYEVDLLMKLLEETIHEQIPRMKKFNIALRFIGDRSRLPSHLVALMEDAEQQTAHHDAM 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA +Y +I+ A K + Q + G + + ++ L Y+ +D+P DL+IRTG
Sbjct: 130 TLTIAVSYGGMWDIANAAKQVAQAVSRGEIDADQINVDLFENYVSLNDLPAVDLLIRTGR 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+ R+S+FLLWQ AY+E F WP+F+ E F HALN ++ R+RRFG S++
Sbjct: 190 DFRISNFLLWQAAYAELYFTDTLWPEFTVEEFDHALNVFSGRERRFGKTSEQ 241
>gi|319947866|ref|ZP_08022053.1| undecaprenyl pyrophosphate synthase [Dietzia cinnamea P4]
gi|319438472|gb|EFV93405.1| undecaprenyl pyrophosphate synthase [Dietzia cinnamea P4]
Length = 233
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/230 (40%), Positives = 135/230 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ ++MDGNGRWA RGLPR GH++G V ++V E+GI L+ +AFS NW+R
Sbjct: 2 PRHVALVMDGNGRWAQERGLPRTEGHKRGEAVLMDVVEGCIEMGIPYLSAYAFSTENWKR 61
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + L++ + ++VR G R L ++ L+EAE+ TR NT +
Sbjct: 62 SPEEVRFLMGFNRDVLRRRRDEMHALGVRVRWAGRRPRLWGSVIKELEEAEELTRDNTVM 121
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R EI A ++I + + +G + D+ A +LD D+PD DL +R G
Sbjct: 122 TLAMCVNYGGRAEIVDAARDIARRVAAGELGPDDITEENFADFLDEPDMPDVDLFLRPSG 181
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E R S+FLLWQ AY+EFVF +PDF R + A +Y RDRRFGG++
Sbjct: 182 ELRTSNFLLWQSAYAEFVFQDTLFPDFDRRDLWAACLEYAERDRRFGGVA 231
>gi|282861796|ref|ZP_06270860.1| undecaprenyl diphosphate synthase [Streptomyces sp. ACTE]
gi|282563612|gb|EFB69150.1| undecaprenyl diphosphate synthase [Streptomyces sp. ACTE]
Length = 270
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 86/228 (37%), Positives = 136/228 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ ++MDGNGRWA RGLPR GH+ G V +++ E+G+KNL+++AFS NW+R
Sbjct: 36 PKHVAVVMDGNGRWAKERGLPRTEGHKVGEGVVMDVLKGCIEMGVKNLSLYAFSTENWKR 95
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ + + I++R +G L ++ L+ A++QT+ N +
Sbjct: 96 SPDEVKFLMNFNRDVIRRRRDEMDELGIRIRWVGRMPKLWKSVVQELQVAQEQTKDNDRM 155
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L+ NY R EI+ A + I +D+ +G + V+ AKY+ D+PD DL +R G
Sbjct: 156 TLYFCVNYGGRAEIADAAQRIAEDVAAGRLDPSKVNEKTFAKYIYYPDMPDVDLFVRPSG 215
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S++L+WQ AY+E VF WPDF R + A ++ RDRRFGG
Sbjct: 216 EQRTSNYLIWQSAYAEMVFQDVLWPDFDRRDLWRACLEFAQRDRRFGG 263
>gi|307247417|ref|ZP_07529464.1| Undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|307256460|ref|ZP_07538242.1| Undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|307258658|ref|ZP_07540393.1| Undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306856114|gb|EFM88270.1| Undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|306865090|gb|EFM96991.1| Undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306867315|gb|EFM99168.1| Undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
Length = 222
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/221 (42%), Positives = 134/221 (60%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA +G R GH+ G++ V+ AA+ GIK LT++AFS NW RP +E+S
Sbjct: 1 MDGNGRWAKQQGKLRVFGHQNGVKAVRSAVSFAAKHGIKVLTLYAFSSENWSRPEAEVSA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ L L L KNNI++ +IGN+ + + + + E+E T NTGL L IA N
Sbjct: 61 LMALFMRALDSEVKKLHKNNIRLNIIGNKSAFSESLQKRIAESEKLTENNTGLILNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y S +I++A + + ++ G + D+ + L T P DL+IRT GE+R+S+F
Sbjct: 121 YGSHWDITQAAQQLAIKVKLGEITVSDITPERLQNALVTGTQPLVDLLIRTSGEQRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
LLWQ+AY+E VF P WPDF+ + F A+ Y RDRRFGG
Sbjct: 181 LLWQIAYAELVFSPVLWPDFNDDSFSEAIIAYQQRDRRFGG 221
>gi|145352831|ref|XP_001420739.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580974|gb|ABO99032.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 273
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/238 (38%), Positives = 134/238 (56%), Gaps = 10/238 (4%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGN RWA R LPR GH +G+ +V GI LT+FAFS NW R
Sbjct: 34 PRHVAIIMDGNSRWAERRRLPRTIGHERGVNALRGVVKCCVAWGISTLTVFAFSQENWGR 93
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
+EI EL+ L+++ +++ L K ++V VIG+ +++ + + A + T+ N L
Sbjct: 94 NQAEIEELMALVETAMREELPLLVKEGVRVEVIGDLSKVNEGVRSAVTRAMEATKDNDSL 153
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD----------VP 180
L +A +Y R +I +A K + Q + G + + D+D + ++ +L T D
Sbjct: 154 RLVVALSYGGRQDIVQAAKTLAQKVADGEMRAEDIDEAALSAHLSTYDARAATNEIDFAQ 213
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PDL+IRT GE+RLS+FLLW +AY+E F +WP+F AL Y RDRRFGG
Sbjct: 214 APDLLIRTSGEQRLSNFLLWDLAYTELYFAQMFWPEFGEAELRRALYAYAKRDRRFGG 271
>gi|329934671|ref|ZP_08284712.1| undecaprenyl phosphate synthetase [Streptomyces griseoaurantiacus
M045]
gi|329305493|gb|EGG49349.1| undecaprenyl phosphate synthetase [Streptomyces griseoaurantiacus
M045]
Length = 284
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 134/228 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I+MDGNGRWA RGLPR GH+ G E +++ E+G+ ++++AFS NW+R
Sbjct: 35 PKHVAIVMDGNGRWAKGRGLPRTEGHKVGAERVLDVLQGGIEMGVGAISLYAFSTENWKR 94
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + F++K L ++VR +G L + L+ A++QT+ N L
Sbjct: 95 SPEEVRFLMNFNRDFIRKSRDQLDALGVRVRWVGRMPKLWRSVAKELQVAQEQTKDNDRL 154
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L+ NY R EI+ A + + +D+ +G + V+ +AKYL D+PD DL +R G
Sbjct: 155 TLYFCMNYGGRAEIADAAQAMAEDVRAGRLEPSKVNEKTLAKYLYYPDMPDVDLFLRPSG 214
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S++L+WQ AY+E VF WPDF R + A ++ RDRRFGG
Sbjct: 215 EQRTSNYLIWQSAYAEMVFQDVLWPDFDRRDLWRACLEFASRDRRFGG 262
>gi|310764945|gb|ADP09895.1| Undecaprenyl pyrophosphate synthetase [Erwinia sp. Ejp617]
Length = 250
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/237 (38%), Positives = 139/237 (58%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ P H+ IIMDGNGRWA +G R +GH+ G++ V+ A + LT++AFS
Sbjct: 13 QGAGPRHVAIIMDGNGRWAKNQGKLRISGHKAGVKSVRRAVSFAVSRKLDALTLYAFSSE 72
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP E+ L++L L SL K+N+++++IG+ + + ++ AE+ T+
Sbjct: 73 NWNRPQQEVLALMELFVWALDSEVKSLHKHNVRLKIIGDISRFNRRLQGCIRRAEEMTQQ 132
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N GL L IA NY R +I ++ I + ++ G + ++ + +L +D+ DL+I
Sbjct: 133 NNGLTLNIAANYGGRWDIIHGVRKIAEQVQEGLLRPDQIEEDTLGTHLCLNDMAPVDLVI 192
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
RTGGE R+S+FLLWQVAY+EF F WPDF +F ALN + R+RRFGG + G
Sbjct: 193 RTGGEHRISNFLLWQVAYAEFWFTDTLWPDFDEHVFEGALNAFAQRERRFGGATPGG 249
>gi|262340875|ref|YP_003283730.1| di-trans,poly-cis-decaprenylcistransferase [Blattabacterium sp.
(Blattella germanica) str. Bge]
gi|262272212|gb|ACY40120.1| di-trans,poly-cis-decaprenylcistransferase [Blattabacterium sp.
(Blattella germanica) str. Bge]
Length = 247
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/230 (41%), Positives = 133/230 (57%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG R GH K + + + E+GI +T++ FS NW R
Sbjct: 18 PHHVAIIMDGNGRWAEKRGKLRTFGHEKAMLSVRDTINGCKELGIPYVTLYVFSSENWNR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EI++L++L + LK + + N+K+ IG + I L +T NT
Sbjct: 78 PKKEINDLMRLFHTNLKIHLEEIHEKNVKIITIGEIERFSEMIQKELSFFIKKTEHNTSG 137
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +YS+R+EI RA KNI + + G + D++ S +L T D+PD DLIIRT G
Sbjct: 138 TLILALSYSAREEILRATKNIAKKVCDGFLSLRDINDSFFKNHLYTKDLPDVDLIIRTSG 197
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E+R+S+FLLWQ AY+E F WPDF ++ FF A+ Y R RRFG +
Sbjct: 198 EQRISNFLLWQSAYAELYFTNILWPDFRKKDFFEAIINYQKRKRRFGNVE 247
>gi|149924398|ref|ZP_01912764.1| undecaprenyl diphosphate synthase [Plesiocystis pacifica SIR-1]
gi|149814741|gb|EDM74314.1| undecaprenyl diphosphate synthase [Plesiocystis pacifica SIR-1]
Length = 274
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/241 (40%), Positives = 142/241 (58%), Gaps = 4/241 (1%)
Query: 6 MSSSP---PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
M +SP P H+GIIMDGNGRWAA RGL R GH KG + EIV A+ +G+ LT++A
Sbjct: 1 MPNSPKRLPRHVGIIMDGNGRWAAERGLRREQGHSKGADAVREIVRASRRIGLDALTLYA 60
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RP E+ L+ L++ +L + + N+I++ +G L +L L E +
Sbjct: 61 FSSQNWARPPREVLHLMHLLRRYLIEERSEILDNDIRLVTVGEIERLPRMVLRPLAELME 120
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV-PD 181
+ N G+ L +A +Y R+ I+ A ++I + + G + +D LI Y+ +S + P
Sbjct: 121 ASADNRGMVLCLALSYGGRESIAAATRDIARAVARGDLDPEAIDPDLIGSYMPSSSMLPS 180
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRT GE+R+S+F LW+VAY+E F P WPDF + AL Y R+RRFG S
Sbjct: 181 LDLLIRTSGERRVSNFFLWEVAYAELHFSPVLWPDFGETDLWSALRDYAGRERRFGMTSA 240
Query: 242 K 242
+
Sbjct: 241 Q 241
>gi|116513084|ref|YP_811991.1| undecaprenyl pyrophosphate synthetase [Lactococcus lactis subsp.
cremoris SK11]
gi|116108738|gb|ABJ73878.1| Undecaprenyl pyrophosphate synthetase [Lactococcus lactis subsp.
cremoris SK11]
Length = 244
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/229 (40%), Positives = 132/229 (57%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HIGIIMDGNGRWA +G PR GH+ G++ ++ A GIK +T++AFS NW R
Sbjct: 15 PEHIGIIMDGNGRWAKKKGKPRIFGHKAGMDSLKDVAVHGARRGIKVMTVYAFSTENWTR 74
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
PV E+ ++ L F K LK+ NI++R+IG R + L + A +T NTG+
Sbjct: 75 PVDEVKFIMSLPIDFYSKYVPVLKEENIQIRMIGERAGMPKATLDSIDRAARETSENTGM 134
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY R +I AI+ + + + S + + S + + ++ DPDLIIRT G
Sbjct: 135 ILNFAMNYGGRRDIILAIQELAKSGQDLSTLTEEDLSKHLQTAVLQENLRDPDLIIRTSG 194
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+R+S+FL WQ AYSE F WPDF A+ + RDRR+GG+
Sbjct: 195 EQRMSNFLTWQSAYSELYFAQTAWPDFDEAELDKAIAAFQKRDRRYGGV 243
>gi|319940999|ref|ZP_08015336.1| Di-trans-poly-cis-decaprenylcistransferase [Sutterella
wadsworthensis 3_1_45B]
gi|319805572|gb|EFW02367.1| Di-trans-poly-cis-decaprenylcistransferase [Sutterella
wadsworthensis 3_1_45B]
Length = 236
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/234 (41%), Positives = 139/234 (59%), Gaps = 8/234 (3%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P H+ +IMDGNGRWA +R LPR GHRKG+E +V AAA+ G+K LT+FAFS NW
Sbjct: 6 SIPKHVAVIMDGNGRWAQSRCLPRVEGHRKGVEALERVVEAAAQRGVKTLTVFAFSSENW 65
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RRP +E++ L+KL L++ L + +++RVIG+R + + AE T +
Sbjct: 66 RRPAAEVTALMKLFALGLERWHKPLSEAGVRLRVIGDRTGFSSALNETIDAAEAATAAGS 125
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+ L IA NY R ++ ++ G + V+ L A +++ + DL++RT
Sbjct: 126 KMTLVIAANYGGRWDM---LQAAQAAAAEGELTMEGVEKRLCA-----AELGEVDLLVRT 177
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GGE+R+S+FLLWQ AY+EF F WPDF E F AL Y R+RRFG S++
Sbjct: 178 GGERRISNFLLWQAAYAEFYFTDTLWPDFDGEAFDDALAWYVGRERRFGMTSEQ 231
>gi|224054548|ref|XP_002298315.1| predicted protein [Populus trichocarpa]
gi|222845573|gb|EEE83120.1| predicted protein [Populus trichocarpa]
Length = 242
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/231 (39%), Positives = 138/231 (59%), Gaps = 3/231 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ +IMDGN +WA RG AGH G E+V + E GI+ LT+FAFS +NW
Sbjct: 11 PRHVAVIMDGNAKWARQRGFSAASAGHEAGGRSLRELVKSCCEWGIRVLTVFAFSYDNWT 70
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ L+ L + L+ + + I+V IG+ L + + ++ + E++TR N
Sbjct: 71 RPKMEVVFLLSLFERMLQSELDNFMRKGIRVSTIGDSSRLPESLKKLISDIEEKTRDNCR 130
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT--SDVPDPDLIIR 187
L+L +A +YS + ++++A K+I ++ G V D+D SL+ + L+T + P PDL+IR
Sbjct: 131 LHLILAVSYSGKYDVTQACKSIAHKVKDGIVQLEDIDESLLEQELETNCAQYPCPDLLIR 190
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
T GE R+S+FLLWQ+AY+E F WPDF + F AL Y R RR+GG
Sbjct: 191 TSGELRISNFLLWQLAYTELFFAEALWPDFGKAEFIEALTSYQQRQRRYGG 241
>gi|302342181|ref|YP_003806710.1| undecaprenyl diphosphate synthase [Desulfarculus baarsii DSM 2075]
gi|301638794|gb|ADK84116.1| undecaprenyl diphosphate synthase [Desulfarculus baarsii DSM 2075]
Length = 259
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 133/235 (56%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
SS P H+ +IMDGNGRWA +GLPR GH G E +V +G++ LT++AFS N
Sbjct: 17 SSLPRHVAVIMDGNGRWAQRQGLPRVRGHEAGAESVRAVVRTCRRLGVEALTLYAFSEEN 76
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP +E++ L KL+ FLK+ + I++ IG+ L L++ T
Sbjct: 77 WARPKAEVAALWKLLGRFLKQERAEMLAQGIRLNAIGSLHKLPTATAQALRKVMADTAGG 136
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+ L +A +Y R E++ A + + + +G + DVD + +A L T D+PD D +IR
Sbjct: 137 RQMVLTLALSYGGRQELTEAAHRLCRRVAAGQLRPEDVDEAAVAASLYTHDLPDVDFLIR 196
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
T GE R+S+FLLWQ+AY+EF F ++PDF AL +Y R RRFG ++
Sbjct: 197 TSGELRVSNFLLWQMAYAEFYFTELHFPDFREAALVEALTEYARRQRRFGQTGQQ 251
>gi|264679363|ref|YP_003279270.1| undecaprenyl diphosphate synthase [Comamonas testosteroni CNB-2]
gi|262209876|gb|ACY33974.1| undecaprenyl diphosphate synthase [Comamonas testosteroni CNB-2]
Length = 245
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/242 (40%), Positives = 141/242 (58%), Gaps = 9/242 (3%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ S + + P HI +IMDGNGRWA R LPR AGH++G+E A E G++ LT+F
Sbjct: 1 MTSKKNGAVPRHIAVIMDGNGRWAKRRLLPRLAGHKQGVESLRRCARACVERGVQVLTVF 60
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+S L+ L+ + L K L ++ +++ +G+R L D + L EAE
Sbjct: 61 AFSSENWNRPQEEVSGLMSLLANALAKEVAQLSRDGVRLYFVGDRQGLSDKVREGLAEAE 120
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDSSLIAKYLDTSDVP 180
T NT L L + FNY R +I++A + + Q +E + ++D ++ + VP
Sbjct: 121 RITAHNTRLVLNVCFNYGGRWDIAQAAQKLVAQGLE---LTPENLDRAMALAH-----VP 172
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRTGGE R+S+FLLWQ AY+E F WP F A+ + R+RRFG S
Sbjct: 173 DPDLMIRTGGETRISNFLLWQAAYTELFFSNALWPGFDEAALDEAIAVFGGRERRFGQTS 232
Query: 241 KK 242
++
Sbjct: 233 EQ 234
>gi|212715507|ref|ZP_03323635.1| hypothetical protein BIFCAT_00405 [Bifidobacterium catenulatum DSM
16992]
gi|212661589|gb|EEB22164.1| hypothetical protein BIFCAT_00405 [Bifidobacterium catenulatum DSM
16992]
Length = 263
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 140/231 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+IMDGNGRWA RGL R GH+ V + +A A E G++ L+++ FS NW+R
Sbjct: 33 PRHIGVIMDGNGRWAQQRGLIRTDGHQAAEPVVFDTIAGAIEAGVRYLSLYTFSTENWKR 92
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + + + + + ++VR G R L ++ L++A+++T+ NT +
Sbjct: 93 SPQEVRFLMGFSRDIIHRRVEQMNEWGVRVRWSGRRPKLWKSVIDELEKAQERTKNNTII 152
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
++ NY R EI+ A I +++ G + V +IA++L D+PD DL+IRT G
Sbjct: 153 DVVFCLNYGGRAEIADACAAIAKEVRDGKISGDRVTEKMIAEHLYNPDIPDCDLVIRTSG 212
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E+R S+FL W+ AY+E F+PE +PD R++ + +++ Y RDRRFGG+ K
Sbjct: 213 EQRTSNFLPWEAAYAELDFVPELFPDCGRDVLWRSIDHYIHRDRRFGGVKK 263
>gi|227495961|ref|ZP_03926272.1| undecaprenyl pyrophosphate synthetase [Actinomyces urogenitalis DSM
15434]
gi|226834449|gb|EEH66832.1| undecaprenyl pyrophosphate synthetase [Actinomyces urogenitalis DSM
15434]
Length = 269
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/221 (40%), Positives = 131/221 (59%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA ARGLPR GHR G +++A A E+GIK L+++AFS NWRR +E+
Sbjct: 42 MDGNGRWANARGLPRTEGHRAGESTMMDVIAGAVEIGIKELSVYAFSTENWRRSPAEVRF 101
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ + L+ L+ ++VR +G L +L ++ AE T N + L + N
Sbjct: 102 LMGFTRQVLRAQTEDLRAWGVQVRWVGREPRLWKSVLEEVRRAERLTAGNETMVLNMCLN 161
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R EI+ A + I Q++ +G + + V +A++L + + + DL+IRTGGE+R S+F
Sbjct: 162 YGGRAEIADAARAIAQEVAAGHLKASAVGERTVARHLYSPTMREVDLMIRTGGEQRTSNF 221
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L+W+ AY+E F P WP+F R + A Y RDRRFGG
Sbjct: 222 LMWEAAYAELYFSPLPWPEFDRTQLWKACQAYAERDRRFGG 262
>gi|93006536|ref|YP_580973.1| undecaprenyl diphosphate synthase [Psychrobacter cryohalolentis K5]
gi|92394214|gb|ABE75489.1| Undecaprenyl pyrophosphate synthetase [Psychrobacter cryohalolentis
K5]
Length = 252
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 136/232 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGN R+ L + GH G + + IV GI+ LT+FAFS NW+R
Sbjct: 13 PRHIAVIMDGNNRYGKVHNLGKGQGHIAGKDALDPIVEYCVSTGIEVLTVFAFSSENWQR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E++ L+ L+ + + + K I++R IG+R L DD+ ++ +AE +T +
Sbjct: 73 PPTEVALLMHLLSLTINEQMPRMVKYRIRLRFIGDRSQLSDDLQLLMADAEAKTADFDAM 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA +Y + +I+ A K + Q +++G + D+D + +Y+ +D P+ D++IRTGG
Sbjct: 133 TLVIAISYGGQWDIAHAAKQLLQQVQAGQLSIDDIDKEKLGEYVQLADAPEVDMLIRTGG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E RLS+FLLWQ AY+E F P WPDFS + L + R RRFG S++
Sbjct: 193 EYRLSNFLLWQSAYAELFFTPTLWPDFSVDELAAMLEDFAQRQRRFGKTSEQ 244
>gi|226360359|ref|YP_002778137.1| undecaprenyl pyrophosphate synthase [Rhodococcus opacus B4]
gi|226238844|dbj|BAH49192.1| undecaprenyl pyrophosphate synthase [Rhodococcus opacus B4]
Length = 269
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/229 (38%), Positives = 138/229 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI ++MDGNGRWA RGLPR AGH +G V + V E+G++ L+ +AFS NW+R
Sbjct: 40 PRHIALVMDGNGRWAQERGLPRTAGHERGEAVLMDAVCGCIEMGVEWLSAYAFSTENWKR 99
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ + + ++VR G R L ++ L+ AE+ T+ NT +
Sbjct: 100 SPEEVRFLMGFNRDVIRRRRDEMHEMGVRVRWAGRRPKLWRSVIKELEIAEELTKHNTVM 159
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL + NY R EI+ A K I + + +G + + + +A++LD D+PD DL +R G
Sbjct: 160 NLTMCVNYGGRAEIADAAKEIGRRVAAGQLDPEKITEATVARFLDEPDMPDVDLFLRPSG 219
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+R S+FL+WQ AY+E V+ + +PDF R + A +Y RDRRFGG+
Sbjct: 220 EQRTSNFLIWQSAYAEMVYQEKLFPDFDRRDLWAACVEYASRDRRFGGV 268
>gi|323697429|ref|ZP_08109341.1| undecaprenyl diphosphate synthase [Desulfovibrio sp. ND132]
gi|323457361|gb|EGB13226.1| undecaprenyl diphosphate synthase [Desulfovibrio desulfuricans
ND132]
Length = 235
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 130/227 (57%), Gaps = 4/227 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA RGL R GHR G E +V E+G+++LT++ FS NW R
Sbjct: 4 PTHIAVIMDGNGRWAKQRGLQRSDGHRAGTEAARAVVTRCRELGVRHLTLYTFSKENWSR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L L+ +FLK+ SLK+ I++ ++G + + VL+ QT T +
Sbjct: 64 PKDEVRTLFDLLTTFLKREEKSLKEQGIRLNILGEIDDMPLAVRQVLRHVMRQTAGCTDM 123
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NYS R+EI RA + + + V V A L T+ PDPDL+IRT G
Sbjct: 124 TLNLALNYSGREEIVRAARALV----AKGVPPEAVTEETFAAELWTAGQPDPDLVIRTSG 179
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E RLS++LL+Q AYSEF F YWPDFS A+ N R RRFG
Sbjct: 180 ELRLSNYLLFQCAYSEFYFTDIYWPDFSPAELDKAIADLNGRQRRFG 226
>gi|237747789|ref|ZP_04578269.1| undecaprenyl pyrophosphate synthetase [Oxalobacter formigenes
OXCC13]
gi|229379151|gb|EEO29242.1| undecaprenyl pyrophosphate synthetase [Oxalobacter formigenes
OXCC13]
Length = 247
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/232 (41%), Positives = 134/232 (57%), Gaps = 4/232 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI I+MDGNGRWA R LPR AGH KG+E + I LT+FAFS NW+R
Sbjct: 17 PQHIAIVMDGNGRWAKKRFLPRVAGHVKGVEAIRRTIEGCIVRNIPYLTVFAFSSENWKR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L S L+K L N+I+++V+G+ D + + AE++T N+ L
Sbjct: 77 PGEEVSFLMNLFLSSLEKETDKLHDNDIRLKVVGDLSRFDVPLQKAITVAEEKTSKNSTL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R +I +A + + S + D+ ++ YL S P+PDL IRTGG
Sbjct: 137 TLTVCANYGGRWDILQAARR----MSSEGLDVKDMTEERLSSYLALSYAPEPDLFIRTGG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AYSE F +WPDF E A+ + R+RRFG S++
Sbjct: 193 ETRISNFLLWQLAYSELYFTETFWPDFDNEELEKAIASFQSRERRFGKTSEQ 244
>gi|89898638|ref|YP_515748.1| undecaprenyl pyrophosphate synthetase [Chlamydophila felis Fe/C-56]
gi|89332010|dbj|BAE81603.1| undecaprenyl pyrophosphate synthetase [Chlamydophila felis Fe/C-56]
Length = 250
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/235 (40%), Positives = 133/235 (56%), Gaps = 4/235 (1%)
Query: 7 SSSPPDHIGIIMDGNGRW----AAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ S P H+ IIMDGN RW R + +GH G + +I+ +A +GI+ LT+FA
Sbjct: 15 TQSLPRHVAIIMDGNRRWYQRHQILRSIQHSSGHHYGAKALPDIIESAFSLGIEVLTLFA 74
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS N+ R E+ EL L S L + L +N I++R IGN L+L + + +
Sbjct: 75 FSTENFLRSTEEVEELFSLFHSQLDEQLPHLIENKIRLRCIGNLLALPKHLQQQIAKITS 134
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
QT+ +G L +A NY +DE+ RA K + QD+ + V LI YLDTS++PDP
Sbjct: 135 QTKEYSGRELVLAINYGGKDELVRAFKKLHQDLSDQKISLDSVSEGLIRLYLDTSEIPDP 194
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRTGGE R+S+FLLWQ+AY+E WPDF + A+ Y R RR G
Sbjct: 195 DLLIRTGGEMRVSNFLLWQIAYTELYVTDVLWPDFKPDHLLDAIKAYQHRARRGG 249
>gi|251793252|ref|YP_003007980.1| di-trans,poly-cis-decaprenylcistransferase [Aggregatibacter
aphrophilus NJ8700]
gi|247534647|gb|ACS97893.1| di-trans,poly-cis-decaprenylcistransferase [Aggregatibacter
aphrophilus NJ8700]
Length = 239
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/228 (42%), Positives = 137/228 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA +G R GH+ G+ E V+ A ++G+K LT++AFS NW R
Sbjct: 10 PQHIAIIMDGNGRWAKQQGKMRIFGHKHGVAAVREAVSYARKIGVKYLTLYAFSSENWSR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L L L KN+I+++++GN + +K+AE T NT L
Sbjct: 70 PEQEVSALMNLFMQALDFEVKKLHKNDIRLKILGNISRFSAGLQEKIKKAEKLTENNTAL 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I +A + + Q ++ + ++D L+ ++L T D P+ DL+IRT G
Sbjct: 130 TLNIAANYGGRWDIVQAAQQLAQQVQEQRLTVTEIDEVLLQQHLVTKDEPEVDLLIRTSG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R+S+FLLWQVAY+E F WPDF+ F A+ Y R RRFGG
Sbjct: 190 EQRISNFLLWQVAYAELYFSDVLWPDFNETEFHQAILSYQQRHRRFGG 237
>gi|91974543|ref|YP_567202.1| undecaprenyl diphosphate synthase [Rhodopseudomonas palustris
BisB5]
gi|91680999|gb|ABE37301.1| Undecaprenyl pyrophosphate synthetase [Rhodopseudomonas palustris
BisB5]
Length = 245
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/228 (45%), Positives = 132/228 (57%), Gaps = 7/228 (3%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+GIIMDGNGRWA RGL R GH G+E +V AA G+ LT+FAFS +NWRRP
Sbjct: 15 HVGIIMDGNGRWATRRGLSRLRGHEAGVEAIRRVVEAAPRQGVGTLTLFAFSSDNWRRPK 74
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+E++ L+ L++ +L SL +N +++ VIG R L D I + AE T LNL
Sbjct: 75 AEVAALMGLLRIYLANEVKSLVRNGVRLTVIGRRDRLPDGIAAAIAAAEVDTTGGETLNL 134
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA +YS+RD AI N CS + S L+ DV DLIIRT GEK
Sbjct: 135 RIAVDYSARD----AILNAAAHAREIGNCSRETFSDLVTGDPRLRDV---DLIIRTSGEK 187
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RLSDFLLW+ AY+E F WPDF + AL ++ R+RRFGGL
Sbjct: 188 RLSDFLLWESAYAELHFTERMWPDFDEDDLADALASFHRRERRFGGLQ 235
>gi|257055407|ref|YP_003133239.1| Undecaprenyl pyrophosphate synthetase [Saccharomonospora viridis
DSM 43017]
gi|256585279|gb|ACU96412.1| Undecaprenyl pyrophosphate synthetase [Saccharomonospora viridis
DSM 43017]
Length = 264
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 90/228 (39%), Positives = 136/228 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ ++MDGNGRWA RGLPR GH++G V ++ + A E+GIK L+++AFS NW+R
Sbjct: 24 PKHVALVMDGNGRWANQRGLPRIEGHKRGEAVMIDVASGAVELGIKWLSVYAFSTENWKR 83
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ L +++R G L ++ L++AE++T+ NT +
Sbjct: 84 SPDEVRFLMGFNRDTIRRQVDYLGSIGVRIRWAGRAPRLWRSVIKELRDAEEKTKHNTRM 143
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
N+ + NY R E+ A + I Q +G + VD ++AKYL ++PD DL +R G
Sbjct: 144 NMTMCVNYGGRAELGDAARRIAQLAAAGKIDPDKVDDRMLAKYLYQPEMPDVDLFLRPSG 203
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E R S+FLLWQ AY+EFVF +PDF R + A +Y RDRRFG
Sbjct: 204 ELRTSNFLLWQSAYAEFVFQDTLFPDFDRRKLWEACLEYAKRDRRFGA 251
>gi|71066088|ref|YP_264815.1| undecaprenyl pyrophosphate synthetase [Psychrobacter arcticus
273-4]
gi|71039073|gb|AAZ19381.1| Undecaprenyl pyrophosphate synthetase [Psychrobacter arcticus
273-4]
Length = 252
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 141/242 (58%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M+ ++ + P HI +IMDGN R+ L + GH G + + IV GI+ LT+
Sbjct: 3 MLDNLAPALLPRHIAVIMDGNNRYGKVHNLGKGQGHIAGKDALDPIVEYCVSTGIEVLTV 62
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW+RP SE++ L+ L++ + + + K I++R IG+R L DD+ ++ +A
Sbjct: 63 FAFSSENWQRPPSEVALLMHLLRLTISEQMPRMLKYRIRLRFIGDRSQLSDDLQILMADA 122
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E +T + L IA +Y + +I+ A K + Q +++G + D+D + +Y+ +D P
Sbjct: 123 EAKTANFDAMTLVIAISYGGQWDIAHAAKQLVQQVQAGHLAIEDIDKEKLGEYVQLADAP 182
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
+ D++IRTGGE RLS+FLLWQ AY+E F P WPDF + L + R RRFG S
Sbjct: 183 EVDMLIRTGGEYRLSNFLLWQSAYAELFFTPTLWPDFRVDELAAMLEDFAQRQRRFGKTS 242
Query: 241 KK 242
++
Sbjct: 243 EQ 244
>gi|319440590|ref|ZP_07989746.1| hypothetical protein CvarD4_02387 [Corynebacterium variabile DSM
44702]
Length = 245
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/229 (38%), Positives = 137/229 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI ++MDGNGRWA +GLPR GH++G V ++V E+G+ L+ +AFS NWRR
Sbjct: 16 PRHIALVMDGNGRWATQQGLPRTEGHKRGEAVLMDMVDECLELGVDVLSAYAFSTENWRR 75
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + L++ L ++VR G R L ++ L++AE QT+ NT +
Sbjct: 76 SADEVRFLMGFNRDVLRRRRDELDAKGVRVRWAGRRPRLWRSVISELEKAEVQTKDNTRM 135
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R E++ A + I D+ +G + +V+ ++ YLD +PD DL +R G
Sbjct: 136 TLVMCVNYGGRAELTDAARAIAGDVAAGKLKPREVNEKVVESYLDEPGLPDVDLFLRPSG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+R+S+FLLWQ AY+E V+ +PD++R A+ +Y RDRRFGG+
Sbjct: 196 EQRISNFLLWQSAYAEMVYQDVLFPDYTRADLKDAVYEYARRDRRFGGV 244
>gi|239815584|ref|YP_002944494.1| undecaprenyl diphosphate synthase [Variovorax paradoxus S110]
gi|239802161|gb|ACS19228.1| undecaprenyl diphosphate synthase [Variovorax paradoxus S110]
Length = 247
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/240 (40%), Positives = 140/240 (58%), Gaps = 9/240 (3%)
Query: 5 MMSSSP--PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
M SSS P HI I+MDGNGRWA R LPR AGH++G+E V A + G+ LT+FA
Sbjct: 1 MASSSLQIPHHIAIVMDGNGRWATRRFLPRVAGHKQGVESLRRCVKACVDRGVGILTVFA 60
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RP E+S L++++ L + L ++ +++ +G R L ++ L +AE
Sbjct: 61 FSSENWNRPPEEVSGLMEIMVGALAREVPKLSRDGVQLHFVGERAGLSKKMVQGLVDAES 120
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NT L L + FNY R +I+RA + + E+ + + D + + + VPDP
Sbjct: 121 ATAQNTKLILNVCFNYGGRWDIARAAARLAEQGEALTEANLD-------RAMALAHVPDP 173
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL+IRTGGE+RLS+FLLWQ AY+E F + WP+F + + + R+RRFG S +
Sbjct: 174 DLLIRTGGEQRLSNFLLWQSAYAELFFSDKLWPEFDQAELDAGIAAFQARERRFGKTSAQ 233
>gi|259907547|ref|YP_002647903.1| Undecaprenyl pyrophosphate synthetase [Erwinia pyrifoliae Ep1/96]
gi|224963169|emb|CAX54653.1| Undecaprenyl pyrophosphate synthetase [Erwinia pyrifoliae Ep1/96]
gi|283477387|emb|CAY73303.1| undecaprenyl pyrophosphate synthetase [Erwinia pyrifoliae DSM
12163]
Length = 250
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/237 (38%), Positives = 139/237 (58%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ P H+ IIMDGNGRWA +G R +GH+ G++ V+ A + LT++AFS
Sbjct: 13 QGAGPRHVAIIMDGNGRWAKNQGKLRISGHKAGVKSVRRAVSFAVSRKLDALTLYAFSSE 72
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP E+ L++L L SL K+N+++++IG+ + + ++ AE+ T+
Sbjct: 73 NWNRPQQEVLALMELFVWALDSEVKSLHKHNVRLKIIGDISRFNRRLQGCIRRAEEMTQQ 132
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N GL L IA NY R +I ++ I + ++ G + ++ + +L +D+ DL+I
Sbjct: 133 NNGLTLNIAANYGGRWDIIHGVRKIAEQVQEGLLRPDQIEEDTLGMHLCLNDMAPVDLVI 192
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
RTGGE R+S+FLLWQVAY+EF F WPDF +F ALN + R+RRFGG + G
Sbjct: 193 RTGGEHRISNFLLWQVAYAEFWFTDTLWPDFDEHVFEGALNAFAQRERRFGGATPGG 249
>gi|297825229|ref|XP_002880497.1| hypothetical protein ARALYDRAFT_481210 [Arabidopsis lyrata subsp.
lyrata]
gi|297326336|gb|EFH56756.1| hypothetical protein ARALYDRAFT_481210 [Arabidopsis lyrata subsp.
lyrata]
Length = 233
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/229 (41%), Positives = 131/229 (57%), Gaps = 2/229 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I+DGN RWA GL GH G + F EI E+GI ++ FAFS NW R
Sbjct: 2 PRHVAFILDGNRRWAKRDGLLTSQGHEAGAKRFIEIAELCFELGIHTVSAFAFSTGNWGR 61
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ L + LK + I+V VIGN+ +D+ IL + E E+ T+
Sbjct: 62 DKDEVKWLMSLFQHQLKSNSQYFHRKEIRVSVIGNQTKIDESILQEIHEIEEATKGYKNK 121
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT--SDVPDPDLIIRT 188
+L +A +YS R +I A K++ + E G + DVD +LI + L T SD P PDL+IRT
Sbjct: 122 HLIVAIDYSGRFDIMHACKSLVKKSERGLIREQDVDEALIERELLTNCSDFPSPDLMIRT 181
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
GE+R+SDF LWQ+AY+E F P WPDF ++ AL Y R+RRFG
Sbjct: 182 SGEQRISDFFLWQLAYTELFFSPVLWPDFDKDKLLEALASYQRRERRFG 230
>gi|29832172|ref|NP_826806.1| undecaprenyl diphosphate synthase [Streptomyces avermitilis
MA-4680]
gi|42559953|sp|Q82BS5|UPPS2_STRAW RecName: Full=Undecaprenyl pyrophosphate synthase 2; Short=UPP
synthase 2; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase 2;
AltName: Full=Undecaprenyl diphosphate synthase 2;
Short=UDS 2
gi|29609290|dbj|BAC73341.1| putative undecaprenyl diphosphate synthase [Streptomyces
avermitilis MA-4680]
Length = 285
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 87/228 (38%), Positives = 134/228 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ +MDGNGRWA RGLPR GH+ G V +++ E+G+KNL+++AFS NW+R
Sbjct: 35 PNHVACVMDGNGRWAKERGLPRTEGHKVGEGVVMDVLKGCIELGVKNLSLYAFSTENWKR 94
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ + I++R +G L ++ L+ A++QT+ N +
Sbjct: 95 SPEEVRFLMNFNRDVIRRRRDEMDALGIRIRWVGRMPKLWKSVVQELQIAQEQTKDNDAM 154
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L+ NY R E++ A K + +D+ +G + V I KYL D+PD DL +R G
Sbjct: 155 TLYFCVNYGGRAELADAAKAMAEDVAAGRLDPAKVSEKTIQKYLYYPDMPDVDLFLRPSG 214
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S++LLWQ +Y+E VF WPDF R + A +Y RDRRFGG
Sbjct: 215 EQRTSNYLLWQSSYAEMVFQDVLWPDFDRRDLWRACVEYASRDRRFGG 262
>gi|188494705|ref|ZP_03001975.1| undecaprenyl diphosphate synthase [Escherichia coli 53638]
gi|188489904|gb|EDU65007.1| undecaprenyl diphosphate synthase [Escherichia coli 53638]
Length = 252
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/226 (39%), Positives = 139/226 (61%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++AFS NW RP
Sbjct: 19 HVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPA 78
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+S L++L L SL ++N+++R+IG+ + + ++++E T NTGL L
Sbjct: 79 QEVSALMELFVGALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTL 138
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA NY R +I + ++ + + ++ G++ +D ++ +++ ++ DL+IRTGGE
Sbjct: 139 NIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGEH 198
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R+S+FLLWQ+AY+E F WPDF + F ALN + R+RRFGG
Sbjct: 199 RISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGG 244
>gi|238918779|ref|YP_002932293.1| di-trans,poly-cis-decaprenylcistransferase, [Edwardsiella ictaluri
93-146]
gi|238868347|gb|ACR68058.1| di-trans,poly-cis-decaprenylcistransferase, putative [Edwardsiella
ictaluri 93-146]
Length = 253
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/239 (39%), Positives = 139/239 (58%), Gaps = 2/239 (0%)
Query: 4 SMMSS--SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
++MSS S P H+ IIMDGNGRWA +G R GH+ G++ V A GI+ LT++
Sbjct: 7 TVMSSVASVPRHVAIIMDGNGRWAKHQGKMRVFGHKAGVKSVRCAVRFAVTRGIRALTLY 66
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+S L++L L L K+ ++++VIG+ + ++ +E
Sbjct: 67 AFSSENWNRPQQEVSALMELFVRALDSEVKRLHKHQVRLKVIGDISRFSPRLQERIRRSE 126
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T NTGL L IA NY R +I + +K + + + G++ + S++ + + +
Sbjct: 127 QMTAENTGLTLNIAANYGGRWDIVQGVKTLAEQVRQGTLLPEAITESMLGEQVCLHEQDS 186
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRTGGE R+S+FLLWQ+AYSEF F WPDF F ALN + R+RRFGG +
Sbjct: 187 VDLVIRTGGEHRVSNFLLWQIAYSEFYFTDVLWPDFDETTFEGALNAFAQRERRFGGTT 245
>gi|292489222|ref|YP_003532109.1| undecaprenyl pyrophosphate synthetase [Erwinia amylovora CFBP1430]
gi|292898544|ref|YP_003537913.1| undecaprenyl pyrophosphate synthetase [Erwinia amylovora ATCC
49946]
gi|291198392|emb|CBJ45499.1| undecaprenyl pyrophosphate synthetase [Erwinia amylovora ATCC
49946]
gi|291554656|emb|CBA22345.1| undecaprenyl pyrophosphate synthetase [Erwinia amylovora CFBP1430]
gi|312173383|emb|CBX81637.1| undecaprenyl pyrophosphate synthetase [Erwinia amylovora ATCC
BAA-2158]
Length = 250
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 139/233 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R +GH+ G++ V+ A + LT++AFS NW R
Sbjct: 17 PRHVAIIMDGNGRWAKNQGKLRISGHKAGVKSVRRAVSFAVSRKLDALTLYAFSSENWNR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L L SL+K+N+++++IG+ + + ++ AE+ T+ N GL
Sbjct: 77 PQLEVMALMELFVWALDSEVKSLQKHNVRLKIIGDISRFNSRLQERIRRAEELTQQNNGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I ++ I + ++ G + ++ + L +DV DL+IRTGG
Sbjct: 137 TLNIAANYGGRWDIIHGVRQIAEQVQEGLLRPDQIEEETLGTRLCLNDVAPVDLVIRTGG 196
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
E R+S+FLLWQVAY+EF F WPDF ++F ALN + R+RRFGG + G
Sbjct: 197 EHRISNFLLWQVAYAEFWFTDTLWPDFDEQVFEGALNAFAQRERRFGGATPGG 249
>gi|251790740|ref|YP_003005461.1| undecaprenyl diphosphate synthase [Dickeya zeae Ech1591]
gi|247539361|gb|ACT07982.1| undecaprenyl diphosphate synthase [Dickeya zeae Ech1591]
Length = 253
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/230 (38%), Positives = 137/230 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG R GH+ G++ ++ A ++ LT++AFS NW R
Sbjct: 17 PRHVAIIMDGNGRWAKQRGKLRIFGHQAGVKSVRRAISYAVGQNLEALTLYAFSSENWNR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L L +L K+N+++RVIG+ + +++ +E T NTGL
Sbjct: 77 PAQEVSALMELFVRVLNSEVKNLHKHNVRLRVIGDISRFSSRLQGLIQRSEAMTENNTGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I ++ I + ++ G + +D S + +Y+ +D+ DL+IRT G
Sbjct: 137 TLNIAANYGGRWDIIHGVRKIAEQVQEGLLRPDTIDESTLNRYMCLNDLAPVDLLIRTSG 196
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E R+S+FLLWQ+AY+E F WPDF + F A++ + R+RRFGG +
Sbjct: 197 EHRISNFLLWQIAYAELYFTDVLWPDFDEQTFEGAIHAFAQRERRFGGTT 246
>gi|218961844|ref|YP_001741619.1| Undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans,poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS) [Candidatus
Cloacamonas acidaminovorans]
gi|167730501|emb|CAO81413.1| Undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans,poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS) [Candidatus
Cloacamonas acidaminovorans]
Length = 246
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 97/228 (42%), Positives = 125/228 (54%), Gaps = 3/228 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG IMDGNGRWA R P GHR G++ ++V E+ ++ LT +AFS NW R
Sbjct: 19 PVHIGFIMDGNGRWAKKRNRPHLYGHRAGVKALRQVVELGVELKLQYLTFYAFSTENWSR 78
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE+ L++L+K LKK L + NI + IG + L+++ + QT NTG+
Sbjct: 79 PESEVKGLLRLLKDQLKKEIPELMEQNIYAQFIGTTVGLEENYWKEVSSLVAQTHNNTGM 138
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ AFNY R EI K + H + YL T+ PDPDLIIRT G
Sbjct: 139 VVNFAFNYGGRLEIIEGFKKF---MTMHPEEWHKLTPEEFGNYLWTAGQPDPDLIIRTSG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
EKRLS+FLLWQ AY+E WPDF + AL Y R+RRFGG
Sbjct: 196 EKRLSNFLLWQSAYAELYITDTLWPDFDKVELIKALLDYTSRERRFGG 243
>gi|317493183|ref|ZP_07951606.1| di-trans,poly-cis-decaprenylcistransferase [Enterobacteriaceae
bacterium 9_2_54FAA]
gi|316918843|gb|EFV40179.1| di-trans,poly-cis-decaprenylcistransferase [Enterobacteriaceae
bacterium 9_2_54FAA]
Length = 253
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 94/230 (40%), Positives = 136/230 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R GH+ G++ V A GIK LT++AFS NW R
Sbjct: 16 PQHVAIIMDGNGRWAKRQGKMRVFGHKAGVKSVRRSVRFAVSHGIKALTLYAFSSENWNR 75
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L L SL K+N+++++IG+ + ++ +E T N GL
Sbjct: 76 PEHEVSALMELFIRALDGEVKSLHKHNVRLKIIGDIGRFSSRLQERIRRSEQLTENNDGL 135
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I + +K + +++G + D+ L+++ + D+ DL+IRTGG
Sbjct: 136 TLNIAANYGGRWDIMQGVKTLAAQVKAGVLQPDDITEDLLSQQVCLHDLAPVDLVIRTGG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E R+S+FLLWQ+AYSEF F WPDF F ALN + R+RRFGG +
Sbjct: 196 EHRVSNFLLWQIAYSEFYFTDVLWPDFDELTFEGALNAFAQRERRFGGTT 245
>gi|157372020|ref|YP_001480009.1| undecaprenyl diphosphate synthase [Serratia proteamaculans 568]
gi|157323784|gb|ABV42881.1| undecaprenyl diphosphate synthase [Serratia proteamaculans 568]
Length = 252
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 94/238 (39%), Positives = 141/238 (59%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+S+ P H+ IIMDGNGRWA +G R GH+ G++ V+ AA + LT++AFS
Sbjct: 11 LSTLGPRHVAIIMDGNGRWAKRQGKLRVFGHKAGVKSVRRAVSFAANNHLDALTLYAFSS 70
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RPV E+S L++L L SL K+N+++RVIG+ + ++ +E T
Sbjct: 71 ENWNRPVQEVSALMELFVRALDSEVKSLHKHNVRLRVIGDISRFSTRLQERIRRSEQLTE 130
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N GL L IA NY R +I + ++ + + ++ GS+ + L+ + + +D+ DL+
Sbjct: 131 NNDGLTLNIAANYGGRWDIIQGVRELAEQVKDGSLRPDQISEELLGERICMNDLSPVDLV 190
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
IRTGGE R+S+FLLWQ+AY+E F WPDF +F ALN + R+RRFGG + G
Sbjct: 191 IRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDELVFEGALNAFAQRERRFGGTTPIG 248
>gi|219871429|ref|YP_002475804.1| undecaprenyl pyrophosphate synthetase [Haemophilus parasuis SH0165]
gi|219691633|gb|ACL32856.1| undecaprenyl pyrophosphate synthetase [Haemophilus parasuis SH0165]
Length = 222
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 94/221 (42%), Positives = 130/221 (58%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA RG R GHRKG++ + V A GIK LT++AFS NW RP E++
Sbjct: 1 MDGNGRWAKQRGKLRVFGHRKGVKAVHSAVNFALTQGIKVLTLYAFSSENWSRPKLEVAA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ L L L NNI++++IG++ + + + ++ AE T NT L L IA N
Sbjct: 61 LMTLFIETLDLNIKKLHSNNIRLKIIGDKTAFSEALQEKIELAEQLTNKNTALTLNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y + +I +A K I +++ + D+ + L T D P DL+IRT GE+R+S+F
Sbjct: 121 YGGQWDIVQATKRIAHQVKNNVIPIEDITTDYFQHNLSTKDQPQVDLLIRTSGEQRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
LLWQ+AY+E VF P WPDF + F A+ Y RDRRFGG
Sbjct: 181 LLWQIAYAELVFSPVLWPDFDEKAFTDAVIAYQQRDRRFGG 221
>gi|167624891|ref|YP_001675185.1| undecaprenyl diphosphate synthase [Shewanella halifaxensis HAW-EB4]
gi|167354913|gb|ABZ77526.1| undecaprenyl diphosphate synthase [Shewanella halifaxensis HAW-EB4]
Length = 266
Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 90/236 (38%), Positives = 143/236 (60%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
++ ++ S P H+ IIMDGNGRWA A+G PR GH+ G++ V+ A +G+++LT+F
Sbjct: 19 ISDLVKQSIPKHVAIIMDGNGRWAQAQGKPRVLGHKAGVKAVRRAVSTARNLGVESLTLF 78
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP E+S L++L + L++ L KN +++ +IG+ + + AE
Sbjct: 79 AFSSENWRRPDKEVSLLMELFFTVLQRELKLLHKNGVRLNIIGDISRFSPRLQKQIAAAE 138
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T N L L +A NY R +I +A + + +ESG + S ++++L + +
Sbjct: 139 EKTADNKDLVLNVAANYGGRWDILQAAQKMAVKVESGEMSSTQFTEEALSEHLCMQNQAE 198
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRTGG+ R+S+F+LWQ AY+E VF WPDF+ + F A+ + R RRFG
Sbjct: 199 VDLMIRTGGDYRISNFVLWQAAYAELVFTDTLWPDFNEDAFKDAIAIFANRQRRFG 254
>gi|269468842|gb|EEZ80443.1| undecaprenyl pyrophosphate synthase [uncultured SUP05 cluster
bacterium]
Length = 237
Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 97/235 (41%), Positives = 134/235 (57%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P HI IIMDGNGRWA R LPR GH+KG++ IV ++G+K LT+FAFS N
Sbjct: 2 NTPKHIAIIMDGNGRWAKKRFLPRIKGHQKGVQAVRNIVKHCGKLGVKTLTLFAFSSENK 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
R E+S L KL S LK+ L K+N+++++IG ++ EA+ NT
Sbjct: 62 NRSNEEVSLLFKLFLSVLKQEVKKLNKHNVRLKIIGELSLFPKEVQKTAIEAQALLSKNT 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL L IA NY + +I++A + I G + + D++ +KYL +D DL+IRT
Sbjct: 122 GLTLIIAANYGGQWDIAQAAQKIASLSAEGKINAEDINVDTFSKYLSLADEHRVDLLIRT 181
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
GE R+S+FLLW +AYSE F WPDF+ A+N + RDRRFG K
Sbjct: 182 SGELRISNFLLWDIAYSELYFTDTLWPDFNSIELDKAINSFTDRDRRFGARKDKA 236
>gi|255569335|ref|XP_002525635.1| undecaprenyl pyrophosphate synthetase, putative [Ricinus communis]
gi|223535071|gb|EEF36753.1| undecaprenyl pyrophosphate synthetase, putative [Ricinus communis]
Length = 310
Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 90/221 (40%), Positives = 134/221 (60%), Gaps = 2/221 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA +G P GH G+ EI+ GIK LT+FAFS NW R
Sbjct: 79 PRHVAVIMDGNGRWAKQQGWPPSKGHEAGVRSLMEIMNLCGHWGIKVLTVFAFSCENWTR 138
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EI L+ L + LK +L + I+V +IG+ L + + +++E ED T+ + L
Sbjct: 139 PKVEIDFLMSLFERVLKSELENLLREGIRVSIIGDVSKLPESLQRLIREVEDTTKDYSKL 198
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT--SDVPDPDLIIRT 188
+L +A +YS + ++ +A +NI ++ G++ D+ LI + L+T S+ P PDL+IRT
Sbjct: 199 HLLVAVSYSGKYDVVKACRNIAGRVKEGAIEPEDISEDLIEQELETNCSEHPSPDLLIRT 258
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQY 229
GE R+S+FLLWQ+AY+E F E WPDF ++ F AL +
Sbjct: 259 SGELRISNFLLWQLAYTELYFAEELWPDFGKDGFVEALTSF 299
>gi|171463275|ref|YP_001797388.1| undecaprenyl diphosphate synthase [Polynucleobacter necessarius
subsp. necessarius STIR1]
gi|171192813|gb|ACB43774.1| undecaprenyl diphosphate synthase [Polynucleobacter necessarius
subsp. necessarius STIR1]
Length = 257
Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 93/235 (39%), Positives = 141/235 (60%), Gaps = 2/235 (0%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S+ P H+ IIMDGNGRWA+ R +PR AGH +G+ +IV ++G++ LT+FAFS N
Sbjct: 15 SAVPRHVAIIMDGNGRWASKRMMPRVAGHSEGLSAVRKIVQECRKLGVEYLTVFAFSSEN 74
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+ L+KL LK L +N+I +R+IG+ + I +++ +E +T
Sbjct: 75 WRRPPEEVGFLMKLFLKSLKGEVSRLAENDIALRLIGDLSRFNSAIQEMVEFSEKKTAGC 134
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
GL IA NY R +I +A++ + + ++ V L+ +L + P+PDL IR
Sbjct: 135 KGLTFTIAANYGGRWDILQAMRQCL--VANPNLKPEQVSEELLQPHLSMAYAPEPDLFIR 192
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE+R+S+FLLWQ+AY+E F WPDF + A + ++ R+RRFG S +
Sbjct: 193 TGGEQRISNFLLWQLAYTELYFTDILWPDFDEKELHKAFDWFSQRERRFGRTSAQ 247
>gi|85373586|ref|YP_457648.1| undecaprenyl diphosphate synthase [Erythrobacter litoralis
HTCC2594]
gi|84786669|gb|ABC62851.1| undecaprenyl diphosphate synthase [Erythrobacter litoralis
HTCC2594]
Length = 225
Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 90/233 (38%), Positives = 142/233 (60%), Gaps = 9/233 (3%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
MS +P H+ IIMDGNGRWA + LPR GHRKG+E E+V + + I+ LT++AFS
Sbjct: 1 MSHNPAKHVAIIMDGNGRWAKRKHLPRAMGHRKGVEAVRELVRSLKDTDIECLTLYAFSS 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP E+ +L+ L++ F+K N++K+ ++G+ +L DI+ +L++A +QT+
Sbjct: 61 ENWKRPEDEVDDLMDLMRKFIKSDLPEFIANDVKLHILGDWRALAPDIVAMLEDALEQTK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N + +A NY + EI + +G + ++++L ++ +P DL+
Sbjct: 121 -NGSRTIAVALNYGGQAEI---VHAARAAAATGEITEEAIEANLF-----SAGLPPLDLL 171
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
IRT GE RLS+FLLWQ AY+E +F+ WPDF+ AL+ + R+RRFGG
Sbjct: 172 IRTSGEVRLSNFLLWQAAYAEMLFVDTLWPDFTPAHLQQALDTFANRERRFGG 224
>gi|308185745|ref|YP_003929876.1| undecaprenyl pyrophosphate synthetase [Pantoea vagans C9-1]
gi|308056255|gb|ADO08427.1| undecaprenyl pyrophosphate synthetase [Pantoea vagans C9-1]
Length = 250
Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 137/233 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R +GH+ G++ V+ A ++ LT++AFS NW R
Sbjct: 17 PRHVAIIMDGNGRWAKNQGKLRISGHKAGVKSVRRAVSFAVSNNLEALTLYAFSSENWSR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L++L L SL K+N+++RVIG+ I ++ +E T N+GL
Sbjct: 77 PAQEVTALMELFVWALDSEVKSLHKHNVRLRVIGDTSRFSPRIQERIRRSETLTANNSGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I +K + + ++ G + + + L ++ DL+IRTGG
Sbjct: 137 TLNIAANYGGRWDIIEGVKKLAEQVQEGLLRPDQITEESLTSQLCMQELAPVDLVIRTGG 196
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
E R+S+FLLWQ+AY+EF F WPDF +F ALN ++LR+RRFGG + G
Sbjct: 197 EHRISNFLLWQIAYAEFYFTDVLWPDFDEHVFEGALNAFSLRERRFGGAAPGG 249
>gi|257455345|ref|ZP_05620580.1| di-trans,poly-cis-decaprenylcistransferase [Enhydrobacter
aerosaccus SK60]
gi|257447307|gb|EEV22315.1| di-trans,poly-cis-decaprenylcistransferase [Enhydrobacter
aerosaccus SK60]
Length = 246
Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 144/235 (61%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
++ P HI IIMDGN R+A A GLP GH G + + +V ++GI+ LT+FAFS N
Sbjct: 6 AAMPQHIAIIMDGNNRYAKAHGLPSGGGHIAGKDNLDPLVEHCMDIGIRALTVFAFSSEN 65
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W+RP SE++ L+KL++ + + ++ I +R IG+R +L + ++++AE+QT
Sbjct: 66 WQRPASEVALLMKLLEQTVHDQLPRMLRHQISLRFIGDRGALTPHLRAIMQDAEEQTAHF 125
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T ++L IA +Y + +I A + + + +E G++ + + A++L SD+P D++IR
Sbjct: 126 TKMSLVIAISYGGQWDIVNACRQVAKQVEEGALTADAITQDDFARHLSLSDLPAVDMLIR 185
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGG+ R+S+FLLWQ AY+E F WPDF ++ + R+RRFG S++
Sbjct: 186 TGGDYRISNFLLWQCAYAELFFTETLWPDFKAAELDQMIDIFMGRERRFGKTSEQ 240
>gi|187731191|ref|YP_001878976.1| undecaprenyl pyrophosphate synthase [Shigella boydii CDC 3083-94]
gi|187428183|gb|ACD07457.1| di-trans,poly-cis-decaprenylcistransferase [Shigella boydii CDC
3083-94]
Length = 252
Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 89/226 (39%), Positives = 139/226 (61%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++AFS NW RP
Sbjct: 19 HVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPA 78
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+S L++L L SL ++N+++R+IG+ + + ++++E T NTGL L
Sbjct: 79 QEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQECIRKSEALTAGNTGLTL 138
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA NY R +I + ++ + + ++ G++ +D ++ +++ ++ DL+IRTGGE
Sbjct: 139 NIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGEH 198
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R+S+FLLWQ+AY+E F WPDF + F ALN + R+RRFGG
Sbjct: 199 RISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGG 244
>gi|255320442|ref|ZP_05361623.1| di-trans,poly-cis-decaprenylcistransferase [Acinetobacter
radioresistens SK82]
gi|262378338|ref|ZP_06071495.1| di-trans,poly-cis-decaprenylcistransferase [Acinetobacter
radioresistens SH164]
gi|255302414|gb|EET81650.1| di-trans,poly-cis-decaprenylcistransferase [Acinetobacter
radioresistens SK82]
gi|262299623|gb|EEY87535.1| di-trans,poly-cis-decaprenylcistransferase [Acinetobacter
radioresistens SH164]
Length = 249
Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 138/232 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGN R+A + + GHR+G V + IV E G+K LT+FAFS NW R
Sbjct: 10 PEHVAIIMDGNNRFAKKNQMQKGEGHREGKNVLDPIVECCVEQGVKALTVFAFSSENWNR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L++ + ++K +I +R IG+R L + ++ +AE +T + +
Sbjct: 70 PQFEVELLMSLLEETIHDQMPRMEKFDICLRFIGDRSRLPAHLRELMLQAEQRTANFSTM 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA +Y +I+ A K I QD + + D++ L +Y D+P DL+IRTGG
Sbjct: 130 TLVIAVSYGGMWDIAEAAKQIAQDAVNQKIQIEDINVDLFGQYASLGDLPPVDLLIRTGG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+ RLS+FLLWQ AY+E F P WP+F+ F HALN +N R+RRFG S++
Sbjct: 190 DYRLSNFLLWQAAYAELYFTPTLWPEFTVNEFNHALNIFNSRERRFGKTSEQ 241
>gi|85708127|ref|ZP_01039193.1| hypothetical protein NAP1_02790 [Erythrobacter sp. NAP1]
gi|85689661|gb|EAQ29664.1| hypothetical protein NAP1_02790 [Erythrobacter sp. NAP1]
Length = 225
Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 93/233 (39%), Positives = 144/233 (61%), Gaps = 9/233 (3%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M H+ IIMDGNGRWA RGLPR GH++G+E +V + + LT++AFS
Sbjct: 1 MGEGRAKHVAIIMDGNGRWAKKRGLPRAVGHQRGVEAVRRLVRGLDPMALDCLTLYAFSS 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+R E+ +L+ L++ F+K N++K+++IGN +L DI+ +L++A ++T
Sbjct: 61 ENWKRSEDEVDDLMNLMRKFIKSDLEEFVANDVKLKIIGNWKALAPDIVAMLEDALERTS 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
+ L L +A NY ++DEI+RA + +G + + +++ LDT+D+P DL+
Sbjct: 121 GGSKL-LAVALNYGAQDEIARAAAQAAE---AGEITAETIEAQ-----LDTADLPPLDLL 171
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
IRT GE RLS+FLLWQ AY+E +F+ WPDF E AL+ + R+RR+GG
Sbjct: 172 IRTSGEIRLSNFLLWQAAYAEMLFVDTLWPDFKPEHLSQALDDFARRERRYGG 224
>gi|261749607|ref|YP_003257293.1| undecaprenyl diphosphate synthase [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
gi|261497700|gb|ACX84150.1| undecaprenyl diphosphate synthase [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
Length = 246
Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 92/227 (40%), Positives = 132/227 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG R GH+ ++ + + E+GI +T++ FS NW R
Sbjct: 17 PHHVAIIMDGNGRWAEKRGQLRTFGHQNAMQSVRDSINGCKELGIPYMTLYVFSSENWNR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EI +L+ L S LK + +N+++ IG D I L +T+ NT +
Sbjct: 77 PKKEIDDLMHLFHSSLKNHLEEIHDSNVRIIPIGEVEKFSDVIQEELFFFRKKTKHNTSV 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y +R+EI RA K I + + G + D+D+S +L T ++PD DL+IRT G
Sbjct: 137 TLILALSYGAREEILRATKTIAKKVCMGHLSLGDIDNSSFKNHLYTKEIPDVDLLIRTSG 196
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+R+S+FLLWQ AY+E F WPDF ++ FF A+ Y R RRFG
Sbjct: 197 EQRISNFLLWQSAYAELYFTKVLWPDFRKKDFFKAIINYQKRQRRFG 243
>gi|302545506|ref|ZP_07297848.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces
hygroscopicus ATCC 53653]
gi|302463124|gb|EFL26217.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces
himastatinicus ATCC 53653]
Length = 279
Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 86/228 (37%), Positives = 135/228 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ +MDGNGRWA RGLPR GH+ G V +++ E+G+KNL+++AFS NW+R
Sbjct: 35 PNHVACVMDGNGRWAKDRGLPRTEGHKVGEGVVLDVLKGCLELGVKNLSLYAFSTENWKR 94
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ + + I++R G L + L+ A++QT+ N +
Sbjct: 95 SPDEVRFLMNFNRDVIRRRRDEMDELGIRIRWAGRMPKLWKSVAQELQVAQEQTKDNDAM 154
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
++ NY R EI+ A K + +D+ +G + V+ +AKYL D+PD DL +R G
Sbjct: 155 TMYFCMNYGGRAEIADAAKALAEDVRAGKLDPSKVNEKTLAKYLYYPDMPDVDLFLRPSG 214
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S++L+WQ AY+E V+ WPDF R + A +Y RDRRFGG
Sbjct: 215 EQRTSNYLIWQSAYAEMVYQDVLWPDFDRRDLWRACLEYASRDRRFGG 262
>gi|237785899|ref|YP_002906604.1| Undecaprenyl pyrophosphate synthase [Corynebacterium kroppenstedtii
DSM 44385]
gi|237758811|gb|ACR18061.1| Undecaprenyl pyrophosphate synthase [Corynebacterium kroppenstedtii
DSM 44385]
Length = 251
Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 91/229 (39%), Positives = 135/229 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI ++MDGNGRWA RGLPR GH++G V + V E G+ L+ +AFS NWRR
Sbjct: 22 PRHIALVMDGNGRWARERGLPRTEGHKRGEAVLMDAVDGCLEAGVNTLSAYAFSTENWRR 81
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ ++ + L L +++R IG R L ++ L++AE QT NT +
Sbjct: 82 SPEEVRFIMGFSRRVLHDHRDELDAKGVRIRWIGRRPRLWRVVIRELEKAEAQTVNNTRM 141
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R EI+ A+K + + ++SG + D+ I+ +L ++PD DL +R G
Sbjct: 142 TLNMCINYGGRAEIADAMKLVAEKVQSGEISPSDITEKNISSFLYDPEMPDVDLFLRPSG 201
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
EKR S+FLLWQ AY+E+VF +PDF++ + A+ +Y RDRRFGG+
Sbjct: 202 EKRTSNFLLWQSAYAEYVFQDVLFPDFTKNHIWAAIKEYAHRDRRFGGV 250
>gi|319760413|ref|YP_004124351.1| undecaprenyl pyrophosphate synthase [Candidatus Blochmannia vafer
str. BVAF]
gi|318039127|gb|ADV33677.1| undecaprenyl pyrophosphate synthase [Candidatus Blochmannia vafer
str. BVAF]
Length = 250
Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 96/227 (42%), Positives = 137/227 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG R GH+ G + + V A LT++AFS NW+R
Sbjct: 19 PKHVAIIMDGNGRWARIRGRLRIIGHQAGFQAARQAVRFAVNYQFDALTLYAFSSENWKR 78
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SEI L++L L Y+L KNNIK+++IG+ + + + AE T N GL
Sbjct: 79 PDSEIDSLMQLFAYALDNEIYNLHKNNIKLKIIGDISRFNKALQNSIFNAERLTADNDGL 138
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL IA NY R +I + +K I ++ G + + ++ L+ +Y+ +D+ DL+IRTGG
Sbjct: 139 NLNIAVNYGGRWDILQGVKKIAVQVKKGILDPNLINEDLLCQYICMNDMVPVDLVIRTGG 198
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+R+S+FLLWQ+AY+E F WPDF+ +F AL+ + RDRRFG
Sbjct: 199 ERRISNFLLWQIAYAELFFTDILWPDFNDVVFKSALHAFMQRDRRFG 245
>gi|229817203|ref|ZP_04447485.1| hypothetical protein BIFANG_02463 [Bifidobacterium angulatum DSM
20098]
gi|229784992|gb|EEP21106.1| hypothetical protein BIFANG_02463 [Bifidobacterium angulatum DSM
20098]
Length = 263
Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 138/231 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+G+IMDGNGRWA RGL R GH+ V + +A A E G++ L+++ FS NW+R
Sbjct: 33 PRHVGVIMDGNGRWAQQRGLIRTDGHQAAEPVVFDTIAGAIEAGVRYLSLYTFSTENWKR 92
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + + + + + ++VR G R L ++ L+ A+++T+ N +
Sbjct: 93 SPQEVRFLMGFSRDIIHRRVDQMNEWGVRVRWSGRRPKLWKSVIDELEVAQEKTKKNKTI 152
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
++ NY R EI+ A I +++ G + V +IA++L D+PD DL+IRT G
Sbjct: 153 DVVFCLNYGGRAEIADACAAIAREVRDGKISGDRVTEKMIAEHLYNPDIPDCDLVIRTSG 212
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E+R S+FL W+ AY+E F+PE +PD RE+ + +++ Y RDRRFGG+ K
Sbjct: 213 EQRTSNFLPWEAAYAELDFVPELFPDCGREVLWRSIDHYVHRDRRFGGVKK 263
>gi|157364645|ref|YP_001471412.1| undecaprenyl diphosphate synthase [Thermotoga lettingae TMO]
gi|157315249|gb|ABV34348.1| undecaprenyl diphosphate synthase [Thermotoga lettingae TMO]
Length = 224
Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 93/227 (40%), Positives = 135/227 (59%), Gaps = 6/227 (2%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IMDGNGRWA +GLPR GHR+G + ++V AE+GIK +T++ FS NW+RP
Sbjct: 4 HLAFIMDGNGRWAQKKGLPRAEGHRRGAQKAEKVVEWCAELGIKYVTLYTFSTENWKRPK 63
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
EI+ L L+ + +K+ F + K +++R G L I + +E E++T+ N + +
Sbjct: 64 EEINYLFLLLVNTIKRKFNHMMKQGVRLRFCGVIDELPKQIADICREFEEKTKHNDKIQV 123
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A NY R E+ A + I++G + D ++L DVPDPD +IRT GE
Sbjct: 124 ILALNYGGRRELIDAFN---RAIKAGVKSLSEDD---FKQFLYLPDVPDPDFVIRTSGEI 177
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
R+S+FLLWQ AYSE F WPDF+R AL+ +N R R+FGGL
Sbjct: 178 RISNFLLWQTAYSELYFTKTLWPDFARSDLLRALDDFNKRHRKFGGL 224
>gi|15609498|ref|NP_216877.1| undecaprenyl pyrophosphate synthase [Mycobacterium tuberculosis
H37Rv]
gi|15841873|ref|NP_336910.1| undecaprenyl pyrophosphate synthase [Mycobacterium tuberculosis
CDC1551]
gi|31793538|ref|NP_856031.1| long (C50) chain Z-isoprenyl diphosphate synthase (Z-decaprenyl
diphosphate synthase) [Mycobacterium bovis AF2122/97]
gi|121638240|ref|YP_978464.1| long (C50) chain z-isoprenyl diphosphate synthase [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|148662193|ref|YP_001283716.1| undecaprenyl diphosphate synthase [Mycobacterium tuberculosis
H37Ra]
gi|148823564|ref|YP_001288318.1| long-chain (C50) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis F11]
gi|167968760|ref|ZP_02551037.1| long-chain (C50) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis H37Ra]
gi|215412107|ref|ZP_03420871.1| long-chain (C50) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis 94_M4241A]
gi|215427736|ref|ZP_03425655.1| long-chain (C50) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T92]
gi|215431301|ref|ZP_03429220.1| long-chain (C50) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis EAS054]
gi|215446605|ref|ZP_03433357.1| long-chain (C50) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T85]
gi|218754089|ref|ZP_03532885.1| long-chain (C50) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis GM 1503]
gi|219558351|ref|ZP_03537427.1| long-chain (C50) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T17]
gi|224990734|ref|YP_002645421.1| long (C50) chain z-isoprenyl diphosphate synthase [Mycobacterium
bovis BCG str. Tokyo 172]
gi|253798561|ref|YP_003031562.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis KZN 1435]
gi|254232503|ref|ZP_04925830.1| long chain (C50) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis C]
gi|254365138|ref|ZP_04981184.1| long chain (C50) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis str. Haarlem]
gi|254551408|ref|ZP_05141855.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis '98-R604 INH-RIF-EM']
gi|260187364|ref|ZP_05764838.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis CPHL_A]
gi|260201485|ref|ZP_05768976.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T46]
gi|260205662|ref|ZP_05773153.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis K85]
gi|289443882|ref|ZP_06433626.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T46]
gi|289448003|ref|ZP_06437747.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis CPHL_A]
gi|289553849|ref|ZP_06443059.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis KZN 605]
gi|289570503|ref|ZP_06450730.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T17]
gi|289575055|ref|ZP_06455282.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis K85]
gi|289750960|ref|ZP_06510338.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T92]
gi|289754466|ref|ZP_06513844.1| undecaprenyl diphosphate synthase [Mycobacterium tuberculosis
EAS054]
gi|289758485|ref|ZP_06517863.1| undecaprenyl diphosphate synthase [Mycobacterium tuberculosis T85]
gi|289762527|ref|ZP_06521905.1| long chain (C50) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis GM 1503]
gi|294994535|ref|ZP_06800226.1| undecaprenyl pyrophosphate synthase [Mycobacterium tuberculosis
210]
gi|297634963|ref|ZP_06952743.1| undecaprenyl pyrophosphate synthase [Mycobacterium tuberculosis KZN
4207]
gi|297731955|ref|ZP_06961073.1| undecaprenyl pyrophosphate synthase [Mycobacterium tuberculosis KZN
R506]
gi|298525843|ref|ZP_07013252.1| undecaprenyl diphosphate synthase [Mycobacterium tuberculosis
94_M4241A]
gi|306776626|ref|ZP_07414963.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu001]
gi|306780399|ref|ZP_07418736.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu002]
gi|306785149|ref|ZP_07423471.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu003]
gi|306789510|ref|ZP_07427832.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu004]
gi|306793835|ref|ZP_07432137.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu005]
gi|306798232|ref|ZP_07436534.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu006]
gi|306804108|ref|ZP_07440776.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu008]
gi|306808680|ref|ZP_07445348.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu007]
gi|306968509|ref|ZP_07481170.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu009]
gi|306972738|ref|ZP_07485399.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu010]
gi|307080443|ref|ZP_07489613.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu011]
gi|307085038|ref|ZP_07494151.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu012]
gi|313659289|ref|ZP_07816169.1| undecaprenyl pyrophosphate synthase [Mycobacterium tuberculosis KZN
V2475]
gi|42560516|sp|P60478|UPSS_MYCBO RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|42560517|sp|P60479|UPPS_MYCTU RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|2078038|emb|CAB08462.1| LONG (C50) CHAIN Z-ISOPRENYL DIPHOSPHATE SYNTHASE (Z-DECAPRENYL
DIPHOSPHATE SYNTHASE) [Mycobacterium tuberculosis H37Rv]
gi|13882139|gb|AAK46724.1| undecaprenyl diphosphate synthase [Mycobacterium tuberculosis
CDC1551]
gi|31619131|emb|CAD97243.1| LONG (C50) CHAIN Z-ISOPRENYL DIPHOSPHATE SYNTHASE (Z-DECAPRENYL
DIPHOSPHATE SYNTHASE) [Mycobacterium bovis AF2122/97]
gi|121493888|emb|CAL72363.1| Long (C50) chain z-isoprenyl diphosphate synthase [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|124601562|gb|EAY60572.1| long chain (C50) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis C]
gi|134150652|gb|EBA42697.1| long chain (C50) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis str. Haarlem]
gi|148506345|gb|ABQ74154.1| undecaprenyl diphosphate synthase [Mycobacterium tuberculosis
H37Ra]
gi|148722091|gb|ABR06716.1| long-chain (C50) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis F11]
gi|224773847|dbj|BAH26653.1| long (C50) chain z-isoprenyl diphosphate synthase [Mycobacterium
bovis BCG str. Tokyo 172]
gi|253320064|gb|ACT24667.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis KZN 1435]
gi|289416801|gb|EFD14041.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T46]
gi|289420961|gb|EFD18162.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis CPHL_A]
gi|289438481|gb|EFD20974.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis KZN 605]
gi|289539486|gb|EFD44064.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis K85]
gi|289544257|gb|EFD47905.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T17]
gi|289691547|gb|EFD58976.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T92]
gi|289695053|gb|EFD62482.1| undecaprenyl diphosphate synthase [Mycobacterium tuberculosis
EAS054]
gi|289710033|gb|EFD74049.1| long chain (C50) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis GM 1503]
gi|289714049|gb|EFD78061.1| undecaprenyl diphosphate synthase [Mycobacterium tuberculosis T85]
gi|298495637|gb|EFI30931.1| undecaprenyl diphosphate synthase [Mycobacterium tuberculosis
94_M4241A]
gi|308214945|gb|EFO74344.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu001]
gi|308326721|gb|EFP15572.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu002]
gi|308330134|gb|EFP18985.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu003]
gi|308333995|gb|EFP22846.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu004]
gi|308337776|gb|EFP26627.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu005]
gi|308341457|gb|EFP30308.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu006]
gi|308344943|gb|EFP33794.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu007]
gi|308349254|gb|EFP38105.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu008]
gi|308353874|gb|EFP42725.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu009]
gi|308357819|gb|EFP46670.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu010]
gi|308361765|gb|EFP50616.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu011]
gi|308365410|gb|EFP54261.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu012]
gi|323719028|gb|EGB28176.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis CDC1551A]
gi|326903977|gb|EGE50910.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis W-148]
gi|328458329|gb|AEB03752.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis KZN 4207]
Length = 296
Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 88/227 (38%), Positives = 138/227 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ I+MDGNGRWA RGL R GH+ G V +I A E+GIK L+++AFS NW+R
Sbjct: 68 PNHVAIVMDGNGRWATQRGLARTEGHKMGEAVVIDIACGAIELGIKWLSLYAFSTENWKR 127
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ +LKK +++R +G+R L ++ L AE+ T+ N +
Sbjct: 128 SPEEVRFLMGFNRDVVRRRRDTLKKLGVRIRWVGSRPRLWRSVINELAVAEEMTKSNDVI 187
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ NY R EI+ A + I +++ +G + + S IA++L D+PD DL +RT G
Sbjct: 188 TINYCVNYGGRTEITEATREIAREVAAGRLNPERITESTIARHLQRPDIPDVDLFLRTSG 247
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+R S+F+LWQ AY+E++F + WPD+ R + A +Y R RRFG
Sbjct: 248 EQRSSNFMLWQAAYAEYIFQDKLWPDYDRRDLWAACEEYASRTRRFG 294
>gi|317484673|ref|ZP_07943574.1| di-trans,poly-cis-decaprenylcistransferase [Bilophila wadsworthia
3_1_6]
gi|316924029|gb|EFV45214.1| di-trans,poly-cis-decaprenylcistransferase [Bilophila wadsworthia
3_1_6]
Length = 244
Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 97/231 (41%), Positives = 134/231 (58%), Gaps = 4/231 (1%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
++S P HI IIMDGNGRWA RGL R GH+ G+ IV +GI++LT++ FS
Sbjct: 11 AASLPAHIAIIMDGNGRWAQERGLSRSEGHKAGVRAAKAIVTECRTLGIRHLTLYTFSQE 70
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP E+S L +L+ SFL + S+++N I +RV G L L+ A ++T
Sbjct: 71 NWGRPKDEVSLLFQLLVSFLGEELPSMERNGISLRVFGELDGLPLPARTALRHAMNRTAK 130
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
+ + + +A NYS R+EI RA + + Q V V L ++ PDPDLII
Sbjct: 131 CSDMIVNLALNYSGREEILRAARLLMQQ----GVKPEAVTEEAFRSCLYSAGQPDPDLII 186
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE+R+S++L +Q AYSE F YWPDF+ E AL +Y R+RRFG
Sbjct: 187 RTSGEQRISNYLTFQSAYSELYFTSTYWPDFTPEALHRALVEYAGRNRRFG 237
>gi|302534317|ref|ZP_07286659.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. C]
gi|302443212|gb|EFL15028.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. C]
Length = 273
Score = 185 bits (470), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 87/228 (38%), Positives = 136/228 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ I+MDGNGRWA RGLPR GH+ G V +++ E+G+KNL+++AFS NW+R
Sbjct: 35 PNHVAIVMDGNGRWAKERGLPRTEGHKVGEGVVLDVLKGCLEMGVKNLSLYAFSTENWKR 94
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ + + I++R +G + ++ L+ A++QT N +
Sbjct: 95 TPDEVRFLMNFNRDVIRRRRDEMNELGIRIRWVGRMPKMWKSVVQELQIAQEQTVDNDAM 154
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L+ NY R EI+ A + I +D+ +G + V+ AKY+ D+PD DL +R G
Sbjct: 155 TLYFCVNYGGRAEIADAAQAIARDVAAGKLDPSKVNEKTFAKYIYYPDMPDVDLFLRPSG 214
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S++L+WQ AY+E VF WPDF R + A +Y RDRRFGG
Sbjct: 215 EQRTSNYLIWQSAYAEMVFQDVLWPDFDRRNLWDACLEYAQRDRRFGG 262
>gi|239979353|ref|ZP_04701877.1| undecaprenyl diphosphate synthase [Streptomyces albus J1074]
Length = 276
Score = 185 bits (470), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 86/228 (37%), Positives = 133/228 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ ++MDGNGRWA RGLPR GH+ G V +++ E+G+KNL+++AFS NW+R
Sbjct: 35 PGHVAVVMDGNGRWAKERGLPRTEGHKVGEGVVMDVLKGCLEMGVKNLSLYAFSTENWKR 94
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + + + + I++R +G L ++ L+ A++QT+ N +
Sbjct: 95 SPEEVRFLMNFNRDVIARRRDEMDALGIRIRWVGRMPKLWKSVVQELQIAQEQTKDNDAM 154
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L+ NY R EI+ A + + +D+ +G + V + KYL D+PD DL +R G
Sbjct: 155 TLYFCVNYGGRAEIADAARRMAEDVAAGRLDPSKVGEKTLQKYLYYPDMPDVDLFVRPSG 214
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S++L+WQ AY+E VF WPDF R + A +Y RDRRFGG
Sbjct: 215 EQRTSNYLIWQSAYAEMVFQDVLWPDFDRRDLWRACLEYAQRDRRFGG 262
>gi|225351487|ref|ZP_03742510.1| hypothetical protein BIFPSEUDO_03082 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225157831|gb|EEG71114.1| hypothetical protein BIFPSEUDO_03082 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 263
Score = 185 bits (470), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 139/231 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+IMDGNGRWA RGL R GH+ V + +A A E G++ L+++ FS NW+R
Sbjct: 33 PRHIGVIMDGNGRWAQQRGLIRTDGHQAAEPVVFDTIAGAIEAGVRYLSLYTFSTENWKR 92
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + + + + ++VR G R L ++ L++A+++T+ NT +
Sbjct: 93 SPQEVRFLMGFSRDIIHRRVEQMNAWGVRVRWSGRRPKLWKSVIDELEKAQERTKNNTTI 152
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
++ NY R EI+ A I +++ G + V +I+++L D+PD DL+IRT G
Sbjct: 153 DVVFCLNYGGRAEIADACAAIAKEVRDGKISGDRVTEKMISEHLYNPDIPDCDLVIRTSG 212
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E+R S+FL W+ AY+E F+PE +PD R++ + +++ Y RDRRFGG+ K
Sbjct: 213 EQRTSNFLPWEAAYAELDFVPELFPDCGRDVLWRSIDHYIHRDRRFGGVKK 263
>gi|294789498|ref|ZP_06754734.1| di-trans,poly-cis-decaprenylcistransferase [Simonsiella muelleri
ATCC 29453]
gi|294482578|gb|EFG30269.1| di-trans,poly-cis-decaprenylcistransferase [Simonsiella muelleri
ATCC 29453]
Length = 250
Score = 185 bits (470), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 143/242 (59%), Gaps = 6/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M S + + P H+ +IMDGNGRWA R +PR GH++G++ E+ + G++ LT+
Sbjct: 7 MSHSANNQNIPRHVAVIMDGNGRWAKKRLMPRVMGHKRGLDTLEEMCRICSNAGVEYLTV 66
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NWRRP E+S L+ L + L+K + N ++V+VIG+R I + A
Sbjct: 67 FAFSTENWRRPEDEVSFLMGLFLTALEKKVAKMHANGLRVKVIGDRSHFSPAIQKGIVAA 126
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E+ T+ N GL L +A +Y + +I +A + + ++ + D+ + L+ ++ P
Sbjct: 127 EELTKNNPGLTLTVAADYGGKWDIIQAANALIAEGKT-QITESDLSTKLM-----LAEAP 180
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
+PDL IRTGGE R+S+F+LWQ+AY+EF F WPDF+ + A + R+RRFG S
Sbjct: 181 EPDLFIRTGGETRISNFMLWQMAYAEFYFTDVLWPDFNETEIYRAFESFTQRERRFGRTS 240
Query: 241 KK 242
++
Sbjct: 241 EQ 242
>gi|291451228|ref|ZP_06590618.1| undecaprenyl pyrophosphate synthetase 2 [Streptomyces albus J1074]
gi|291354177|gb|EFE81079.1| undecaprenyl pyrophosphate synthetase 2 [Streptomyces albus J1074]
Length = 282
Score = 185 bits (470), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 86/228 (37%), Positives = 133/228 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ ++MDGNGRWA RGLPR GH+ G V +++ E+G+KNL+++AFS NW+R
Sbjct: 41 PGHVAVVMDGNGRWAKERGLPRTEGHKVGEGVVMDVLKGCLEMGVKNLSLYAFSTENWKR 100
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + + + + I++R +G L ++ L+ A++QT+ N +
Sbjct: 101 SPEEVRFLMNFNRDVIARRRDEMDALGIRIRWVGRMPKLWKSVVQELQIAQEQTKDNDAM 160
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L+ NY R EI+ A + + +D+ +G + V + KYL D+PD DL +R G
Sbjct: 161 TLYFCVNYGGRAEIADAARRMAEDVAAGRLDPSKVGEKTLQKYLYYPDMPDVDLFVRPSG 220
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S++L+WQ AY+E VF WPDF R + A +Y RDRRFGG
Sbjct: 221 EQRTSNYLIWQSAYAEMVFQDVLWPDFDRRDLWRACLEYAQRDRRFGG 268
>gi|261856046|ref|YP_003263329.1| undecaprenyl diphosphate synthase [Halothiobacillus neapolitanus
c2]
gi|261836515|gb|ACX96282.1| undecaprenyl diphosphate synthase [Halothiobacillus neapolitanus
c2]
Length = 255
Score = 185 bits (470), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 96/239 (40%), Positives = 136/239 (56%), Gaps = 2/239 (0%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ S+ P H+ +IMDGNGRWA R LPR GH++G ++ +A I LT+FAFS
Sbjct: 17 VQPSNGPQHVAVIMDGNGRWARERHLPRSLGHQRGRRAVRRLIESARRANIPVLTLFAFS 76
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP E+ L++L L++ L N I+V+ IG+R L I + +AE+ T
Sbjct: 77 SENWTRPAEEVDALMRLFSYALERDIKDLHANGIRVQFIGDRTRLPQGICHSMTQAEELT 136
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDS--SLIAKYLDTSDVPDP 182
N GL+L IA +Y + +I +A + + E G V D + S L T++ P
Sbjct: 137 SANDGLHLMIAVSYGGQWDILQAATRLARSAERGEVDLDDETAVRSCFEANLSTANQPPV 196
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL IRTGGE+R+S+FLLWQ AY+E F WP F+ + F ALN + R RRFGG+ +
Sbjct: 197 DLFIRTGGEQRISNFLLWQSAYAELYFTSCLWPSFTEKDFRDALNWFAARQRRFGGVEE 255
>gi|295839013|ref|ZP_06825946.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. SPB74]
gi|295827285|gb|EFG65329.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. SPB74]
Length = 280
Score = 185 bits (470), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 89/228 (39%), Positives = 131/228 (57%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I+MDGNGRWA RGLPR GHR G V + + E+G+KNL+++AFS NW+R
Sbjct: 35 PGHVAIVMDGNGRWAKERGLPRTEGHRVGEGVVMDALKGCLELGVKNLSLYAFSTENWKR 94
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + + + + + I++R G L ++ L+ A++QT N L
Sbjct: 95 SPDEVRFLMNFNRDVIARRRDEMDELGIRIRWAGRMPKLWKSVVKELQIAQEQTTENDAL 154
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L+ NY R EI+ A + + +D+ +G + V + KYL D+PD DL +R G
Sbjct: 155 TLYFCLNYGGRAEIADAARRLAEDVATGRLDPSKVSEKTVQKYLYYPDMPDVDLFLRPSG 214
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S+FLLWQ +Y+E V+ WPDF R + A +Y RDRRFGG
Sbjct: 215 EQRTSNFLLWQSSYAEMVYQDVLWPDFDRRDLWRACVEYAKRDRRFGG 262
>gi|254526616|ref|ZP_05138668.1| undecaprenyl pyrophosphate synthetase 1 [Prochlorococcus marinus
str. MIT 9202]
gi|221538040|gb|EEE40493.1| undecaprenyl pyrophosphate synthetase 1 [Prochlorococcus marinus
str. MIT 9202]
Length = 267
Score = 185 bits (470), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 87/229 (37%), Positives = 130/229 (56%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +GLPR GH++G+ V +I+ AA +G K +T++AFS NW R
Sbjct: 24 PKHVAIIMDGNGRWATRKGLPRSFGHKQGVSVLKKILKAAKNLGCKVITVYAFSTENWTR 83
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L LK + + + K++ IG+ + ++ AE T+ N
Sbjct: 84 PTKEVDFLLNLFSEVLKNEIEEIHEESTKIKFIGDLTPFPKKLKEIISNAESLTKNNNKF 143
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ NY R EI +A K + +G + +++ L L T + DP+L+IRT G
Sbjct: 144 LFNVCVNYGGRQEIVKAAKKLALKSSTGEIKPSEINEELFNSELLTGGIKDPELLIRTSG 203
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
EKR+S+FLLWQ+AYSE WP+F+ F A+ + R+RRFGG+
Sbjct: 204 EKRISNFLLWQLAYSEIYISDVLWPEFNEHEFLKAIIDFQSRNRRFGGI 252
>gi|188533042|ref|YP_001906839.1| Undecaprenyl pyrophosphate synthetase [Erwinia tasmaniensis Et1/99]
gi|188028084|emb|CAO95941.1| Undecaprenyl pyrophosphate synthetase [Erwinia tasmaniensis Et1/99]
Length = 250
Score = 185 bits (470), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 90/234 (38%), Positives = 140/234 (59%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ P H+ IIMDGNGRWA +G R +GH+ G++ V+ A + LT++AFS
Sbjct: 13 QGTGPRHVAIIMDGNGRWAKNQGKLRISGHKAGVKSVRRAVSFAVSRKLDALTLYAFSSE 72
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP E+ L++L L SL K+N+++++IG+ ++ + ++ AE+ T+
Sbjct: 73 NWNRPQQEVLALMELFVWALDSEVKSLHKHNVRLKIIGDISRFNNRLQERIRRAEELTQQ 132
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N GL L IA NY R +I ++ I + ++ G + ++ + +L +D+ DL+I
Sbjct: 133 NNGLTLNIAANYGGRWDIIHGVRKIAEQVQEGLLRPDQIEEETLGAHLCLNDMAPVDLVI 192
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RTGGE R+S+FLLWQVAY+EF F WPDF ++F ALN + R+RRFGG +
Sbjct: 193 RTGGEHRISNFLLWQVAYAEFWFTDTLWPDFDEQVFEGALNAFAQRERRFGGAT 246
>gi|154509425|ref|ZP_02045067.1| hypothetical protein ACTODO_01956 [Actinomyces odontolyticus ATCC
17982]
gi|153799059|gb|EDN81479.1| hypothetical protein ACTODO_01956 [Actinomyces odontolyticus ATCC
17982]
Length = 274
Score = 185 bits (470), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 87/228 (38%), Positives = 135/228 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA +RGL R GHR G + +A A + G++ L+++ FS NW+R
Sbjct: 39 PAHVALIMDGNGRWANSRGLARTEGHRAGEYALMDTIAGAIDAGVRYLSVYTFSTENWKR 98
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
+E+S ++ L + L + + VR G R L ++ L++A+ T L
Sbjct: 99 SPAEVSFIMNYASDVLARRTDQLAQWGVHVRWSGRRPKLWKSVINALEKADRATSHCKAL 158
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L + NY R E++ A ++I + + +G + V ++++L DVPD DL+IRT G
Sbjct: 159 DLIMCVNYGGRAELADAARSIAEGVAAGRLSPRGVTEKTLSRHLYLPDVPDVDLMIRTSG 218
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+RLS++LLWQ+AY+E +F+ WP F RE + L +Y RDRRFGG
Sbjct: 219 EQRLSNYLLWQMAYAEMMFVNTPWPAFDREELWGCLEEYAGRDRRFGG 266
>gi|157962700|ref|YP_001502734.1| undecaprenyl diphosphate synthase [Shewanella pealeana ATCC 700345]
gi|157847700|gb|ABV88199.1| undecaprenyl diphosphate synthase [Shewanella pealeana ATCC 700345]
Length = 266
Score = 185 bits (470), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 142/236 (60%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+++++ S P H+ IIMDGNGRWA A+G PR GH+ G++ V+ A +G+++LT+F
Sbjct: 19 ISALVKQSIPKHVAIIMDGNGRWAQAQGKPRVIGHKAGVKAVRRAVSTARNLGVESLTLF 78
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP E+S L++L + L++ L N +++ +IG+ + + AE
Sbjct: 79 AFSSENWRRPDKEVSLLMELFFTVLQRELKLLHNNGVRLNIIGDISRFSPRLQKQIAAAE 138
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T N L L +A NY R +I +A + + +ESG + S ++++L + +
Sbjct: 139 EKTADNKDLVLNVAANYGGRWDIMQAAQKLAAKVESGEMSSTQFTEEALSEHLCMQNQAE 198
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRTGG+ R+S+F+LWQ AY+E VF WPDF + F A+ + R RRFG
Sbjct: 199 VDLMIRTGGDYRISNFVLWQAAYAELVFTDTLWPDFDEDAFKDAIAIFANRQRRFG 254
>gi|27375963|ref|NP_767492.1| undecaprenyl pyrophosphate synthase [Bradyrhizobium japonicum USDA
110]
gi|42559966|sp|Q89W41|UPPS1_BRAJA RecName: Full=Undecaprenyl pyrophosphate synthase 1; Short=UPP
synthase 1; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase 1;
AltName: Full=Undecaprenyl diphosphate synthase 1;
Short=UDS 1
gi|27349102|dbj|BAC46117.1| undecaprenyl pyrophosphate synthase [Bradyrhizobium japonicum USDA
110]
Length = 246
Score = 185 bits (470), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 106/240 (44%), Positives = 139/240 (57%), Gaps = 7/240 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + M S S H+GIIMDGNGRWA RGL R GH G+E IV AA + GI LT+
Sbjct: 1 MQSDMTSRSEKLHVGIIMDGNGRWATRRGLSRLRGHEAGVETIRRIVEAAPKQGIGTLTL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS +NWRRP +E++ L+ L++ +L SL KN +++ VIG R L D I + A
Sbjct: 61 YAFSTDNWRRPKAEVAALMTLLRFYLANEVQSLVKNGVRLTVIGRRDRLPDGIANAIARA 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E T + L+L IA +YS+RD AI N + + + + S L+ DV
Sbjct: 121 EAATAHGSTLHLRIAVDYSARD----AILNAAAKAAALTSLTREAFSQLVTGEAGLRDV- 175
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DLIIRT GEKRLSDFLLW+ AY+E F WP+F AL ++ R+RRFGGL
Sbjct: 176 --DLIIRTSGEKRLSDFLLWEGAYAELHFTERMWPEFDAGDLAEALAAFHGRERRFGGLQ 233
>gi|239917729|ref|YP_002957287.1| Undecaprenyl pyrophosphate synthetase [Micrococcus luteus NCTC
2665]
gi|281413777|ref|ZP_06245519.1| Undecaprenyl pyrophosphate synthetase [Micrococcus luteus NCTC
2665]
gi|239838936|gb|ACS30733.1| Undecaprenyl pyrophosphate synthetase [Micrococcus luteus NCTC
2665]
Length = 287
Score = 185 bits (470), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 95/236 (40%), Positives = 139/236 (58%), Gaps = 8/236 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I+MDGNGRWA RGLPR GHR G ++VA A E+GI +++ +AFS NWRR
Sbjct: 28 PRHVAIVMDGNGRWANQRGLPRTEGHRAGEAALLDVVAGAVELGIGHVSAYAFSTENWRR 87
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + L++ +L N+++R G L ++ L+EAE+ TR NTG
Sbjct: 88 SAEEVRFLMGFSRDVLRRQRDTLHSWNVRIRWNGRAPRLWTPVIRELQEAEELTRHNTGT 147
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD--------TSDVPDP 182
L + NY SR EI ++ I +++ +G + ++ +I +YLD VPD
Sbjct: 148 TLHMCVNYGSRAEILDGVQAIAEEVRAGRMRPGEISEDVITRYLDRGFRTGQDVDVVPDV 207
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DL +RT GE+RLS++LLWQ AY+E +F+ WPD R + A+ Y RDRR+GG
Sbjct: 208 DLFLRTSGEQRLSNYLLWQSAYAELLFLDVLWPDVDRRTLWAAVETYARRDRRYGG 263
>gi|324998274|ref|ZP_08119386.1| putative undecaprenyl pyrophosphate synthetase [Pseudonocardia sp.
P1]
Length = 259
Score = 185 bits (470), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 86/228 (37%), Positives = 137/228 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ ++MDGNGRWA ARGLPR GH++G ++ ++G+ L+ +AFS NWRR
Sbjct: 24 PRHVALVMDGNGRWANARGLPRTEGHKRGEASLMDVARGCIDIGVTWLSAYAFSTENWRR 83
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ + + ++VR G R L ++ L+ AE++T+ N L
Sbjct: 84 SPDEVRFLMGFNRDVIRRRVDEMHEMGVRVRWAGRRPRLWRSVIKELEVAEERTKHNDVL 143
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL + NY R EI +++++ + G + +D ++A++LD D+PD DL +R+ G
Sbjct: 144 NLTMCVNYGGRAEIVDSVRHLARLAAEGKIKPDKIDERMLARHLDEPDMPDVDLFVRSSG 203
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S+FLLWQ AY+E VF+ +PDF R + A+ Y RDRRFGG
Sbjct: 204 EQRTSNFLLWQSAYAEMVFLDTPFPDFDRRHIWEAIEIYARRDRRFGG 251
>gi|293189545|ref|ZP_06608265.1| di-trans,poly-cis-decaprenylcistransferase [Actinomyces
odontolyticus F0309]
gi|292821635|gb|EFF80574.1| di-trans,poly-cis-decaprenylcistransferase [Actinomyces
odontolyticus F0309]
Length = 274
Score = 185 bits (469), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 87/228 (38%), Positives = 136/228 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ +IMDGNGRWA +RGL R GHR G + +A A + G++ L+++ FS NW+R
Sbjct: 39 PEHVALIMDGNGRWANSRGLARTEGHRAGEYALMDTIAGAIDAGVRYLSVYTFSTENWKR 98
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
+E+S ++ L + L + + VR G R L ++ L++A+ T L
Sbjct: 99 SPAEVSFIMNYASDVLARRTDQLAQWGVHVRWSGRRPKLWKSVINALEKADRATSHCKAL 158
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L + NY R E++ A ++I + + +G + V ++++L DVPD DL+IRT G
Sbjct: 159 DLIMCVNYGGRAELADAARSIAEGVAAGRLSPRGVTEKTLSRHLYLPDVPDVDLMIRTSG 218
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+RLS++LLWQ+AY+E +F+ WP F RE + L +Y RDRRFGG
Sbjct: 219 EQRLSNYLLWQMAYAEMMFVNIPWPAFDREELWGCLEEYAGRDRRFGG 266
>gi|90415797|ref|ZP_01223730.1| undecaprenyl diphosphate synthase [marine gamma proteobacterium
HTCC2207]
gi|90332171|gb|EAS47368.1| undecaprenyl diphosphate synthase [marine gamma proteobacterium
HTCC2207]
Length = 237
Score = 185 bits (469), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 92/220 (41%), Positives = 133/220 (60%), Gaps = 1/220 (0%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGN RWA RGL AGH G+E +I+ AA GI+ +T+FAFS NW+RP E+
Sbjct: 1 MDGNNRWAKQRGLSGVAGHEAGVERIRDILHAAKARGIEVVTLFAFSSENWKRPEFEVRG 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ L S+LKK L+ + +++RV+GNR D + ++ +AE T + L + +
Sbjct: 61 LMALFSSYLKKEAKKLRDDGVRLRVVGNRNQFSDRLKRLIDDAESLT-ASGKFTLVLCVD 119
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I A + I +++ G + DV +AK+L T +PDPDL +RT GE+R+S+F
Sbjct: 120 YGGRWDIVTATQKIASEVQMGRLRPSDVTEDTVAKFLQTEGLPDPDLCVRTAGEQRISNF 179
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
LLWQ+AY+EF F YWPDF A+++Y R RRFG
Sbjct: 180 LLWQMAYTEFYFANCYWPDFDTAALNVAVDEYYSRQRRFG 219
>gi|325336000|gb|ADZ12274.1| Undecaprenyl pyrophosphate synthase [Riemerella anatipestifer
RA-GD]
Length = 252
Score = 185 bits (469), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 135/232 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA ++G R GH+ IE + A E+G+ LT++ FS NW R
Sbjct: 18 PQHIAIIMDGNGRWAKSKGQERTFGHKSAIEAVRNAINACNEIGVPYLTLYTFSTENWGR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L+ L + +++ VIG+ L + L D T+ NT
Sbjct: 78 PSDEVDTLMNLLSDTLLAEAEDIFNKGLRMHVIGDVERLPSLVKDQLLNVVDLTKNNTKG 137
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL +A +Y SR EI A+K I ++++G + + I++ L T D+PD DL+IRT G
Sbjct: 138 NLVLALSYGSRHEILTAVKKIATEVKNGELSVEAISEETISQNLFTKDIPDVDLLIRTSG 197
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AY+E F+ WPDFS++ FF + Y ++RR+G S++
Sbjct: 198 EVRVSNFLLWQIAYAELQFLDVLWPDFSKDDFFQCVVDYQNKERRYGKTSEQ 249
>gi|226954085|ref|ZP_03824549.1| undecaprenyl pyrophosphate synthetase [Acinetobacter sp. ATCC
27244]
gi|294650308|ref|ZP_06727676.1| undecaprenyl pyrophosphate synthetase [Acinetobacter haemolyticus
ATCC 19194]
gi|226835126|gb|EEH67509.1| undecaprenyl pyrophosphate synthetase [Acinetobacter sp. ATCC
27244]
gi|292823838|gb|EFF82673.1| undecaprenyl pyrophosphate synthetase [Acinetobacter haemolyticus
ATCC 19194]
Length = 249
Score = 185 bits (469), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 91/241 (37%), Positives = 148/241 (61%), Gaps = 4/241 (1%)
Query: 6 MSSS----PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
M+SS PP H+ IIMDGN R+A + + + GHR+G V + +V G++ LT+F
Sbjct: 1 MTSSEEHHPPQHVAIIMDGNNRFAKKKQMQKGDGHREGKNVLDPVVEHCKRSGVRALTVF 60
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+ L++L+K + + ++K NI +R IG+R L +++ +++EAE
Sbjct: 61 AFSSENWNRPQYEVDLLMQLLKETIYEQLPRMEKFNIALRFIGDRSRLSEELRDLMQEAE 120
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T + L IA +Y +++ A K+I +D+ +G + + ++ L KY+ +D+P
Sbjct: 121 QKTAAFDSMTLSIAISYGGMWDMAHAAKSIAEDVVAGKLQTDQINVDLFDKYVSLNDLPA 180
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRTGG+ RLS+FLLWQ AY+E F WP+F+ + HA ++ R+RRFG S+
Sbjct: 181 VDLLIRTGGDYRLSNFLLWQAAYAELYFTDTLWPEFTIKELDHAFRVFSGRERRFGKTSE 240
Query: 242 K 242
+
Sbjct: 241 Q 241
>gi|160286206|pdb|2VG2|A Chain A, Rv2361 With Ipp
gi|160286207|pdb|2VG2|B Chain B, Rv2361 With Ipp
gi|160286208|pdb|2VG2|C Chain C, Rv2361 With Ipp
gi|160286209|pdb|2VG2|D Chain D, Rv2361 With Ipp
gi|161172295|pdb|2VG4|A Chain A, Rv2361 Native
gi|161172296|pdb|2VG4|B Chain B, Rv2361 Native
gi|161172297|pdb|2VG4|C Chain C, Rv2361 Native
gi|161172298|pdb|2VG4|D Chain D, Rv2361 Native
gi|187609138|pdb|2VG3|A Chain A, Rv2361 With Citronellyl Pyrophosphate
gi|187609139|pdb|2VG3|B Chain B, Rv2361 With Citronellyl Pyrophosphate
gi|187609140|pdb|2VG3|C Chain C, Rv2361 With Citronellyl Pyrophosphate
gi|187609141|pdb|2VG3|D Chain D, Rv2361 With Citronellyl Pyrophosphate
Length = 284
Score = 185 bits (469), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 88/227 (38%), Positives = 138/227 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ I+MDGNGRWA RGL R GH+ G V +I A E+GIK L+++AFS NW+R
Sbjct: 56 PNHVAIVMDGNGRWATQRGLARTEGHKMGEAVVIDIACGAIELGIKWLSLYAFSTENWKR 115
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ +LKK +++R +G+R L ++ L AE+ T+ N +
Sbjct: 116 SPEEVRFLMGFNRDVVRRRRDTLKKLGVRIRWVGSRPRLWRSVINELAVAEEMTKSNDVI 175
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ NY R EI+ A + I +++ +G + + S IA++L D+PD DL +RT G
Sbjct: 176 TINYCVNYGGRTEITEATREIAREVAAGRLNPERITESTIARHLQRPDIPDVDLFLRTSG 235
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+R S+F+LWQ AY+E++F + WPD+ R + A +Y R RRFG
Sbjct: 236 EQRSSNFMLWQAAYAEYIFQDKLWPDYDRRDLWAACEEYASRTRRFG 282
>gi|74310794|ref|YP_309213.1| undecaprenyl pyrophosphate synthase [Shigella sonnei Ss046]
gi|73854271|gb|AAZ86978.1| conserved hypothetical protein [Shigella sonnei Ss046]
Length = 253
Score = 185 bits (469), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 89/226 (39%), Positives = 139/226 (61%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++AFS NW RP
Sbjct: 20 HVAIIMDGNGRWAKKQGRIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPA 79
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+S L++L L SL ++N+++R+IG+ + + ++++E T NTGL L
Sbjct: 80 QEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTL 139
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA NY R +I + ++ + + ++ G++ +D ++ +++ ++ DL+IRTGGE
Sbjct: 140 NIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGEH 199
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R+S+FLLWQ+AY+E F WPDF + F ALN + R+RRFGG
Sbjct: 200 RISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGG 245
>gi|227543024|ref|ZP_03973073.1| undecaprenyl pyrophosphate synthase [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227181246|gb|EEI62218.1| undecaprenyl pyrophosphate synthase [Corynebacterium
glucuronolyticum ATCC 51866]
Length = 246
Score = 185 bits (469), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 90/228 (39%), Positives = 135/228 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI ++MDGNGRWA RG+ R GH++G V +I+ A E+GI +L+ +AFS NWRR
Sbjct: 17 PNHIALVMDGNGRWAQERGMVRTEGHKRGEAVLMDIIDACLELGIPHLSAYAFSTENWRR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + L + L + ++VR G R L ++ L+ AE+ T+ NT +
Sbjct: 77 TADEVRFLMGFNRDVLHRQRDVLNEKGVRVRWAGRRPRLWRSVIRELELAEEMTKENTRM 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
++ NY R EI A + I + ++G++ V A++LD +PD DL +R G
Sbjct: 137 TFYMCVNYGGRAEIVDAAREIARRAQAGTLRPEQVTEKTFAQFLDEPGMPDVDLFLRPSG 196
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
EKR S+FLLWQ AY+E V+ +PDF++E + A +Y RDRRFGG
Sbjct: 197 EKRTSNFLLWQSAYAEMVYQNTLFPDFTKENLYDACLEYAKRDRRFGG 244
>gi|313206552|ref|YP_004045729.1| undecaprenyl diphosphate synthase [Riemerella anatipestifer DSM
15868]
gi|312445868|gb|ADQ82223.1| undecaprenyl diphosphate synthase [Riemerella anatipestifer DSM
15868]
gi|315023452|gb|EFT36460.1| Undecaprenyl pyrophosphate synthetase [Riemerella anatipestifer
RA-YM]
Length = 248
Score = 185 bits (469), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 135/232 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA ++G R GH+ IE + A E+G+ LT++ FS NW R
Sbjct: 14 PQHIAIIMDGNGRWAKSKGQERTFGHKSAIEAVRNAINACNEIGVPYLTLYTFSTENWGR 73
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L+ L + +++ VIG+ L + L D T+ NT
Sbjct: 74 PSDEVDTLMNLLSDTLLAEAEDIFNKGLRMHVIGDVERLPSLVKDQLLNVVDLTKNNTKG 133
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL +A +Y SR EI A+K I ++++G + + I++ L T D+PD DL+IRT G
Sbjct: 134 NLVLALSYGSRHEILTAVKKIATEVKNGELSVEAISEETISQNLFTKDIPDVDLLIRTSG 193
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AY+E F+ WPDFS++ FF + Y ++RR+G S++
Sbjct: 194 EVRVSNFLLWQIAYAELQFLDVLWPDFSKDDFFQCVVDYQNKERRYGKTSEQ 245
>gi|170768663|ref|ZP_02903116.1| di-trans, poly-cis-decaprenylcistransferase [Escherichia albertii
TW07627]
gi|170122767|gb|EDS91698.1| di-trans, poly-cis-decaprenylcistransferase [Escherichia albertii
TW07627]
Length = 253
Score = 185 bits (469), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 90/237 (37%), Positives = 143/237 (60%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
++ M + H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++
Sbjct: 9 LSEKMPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY 68
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+S L++L L SL ++N+++R+IG+ + + ++++E
Sbjct: 69 AFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSE 128
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T NTGL L IA NY R +I + ++ + + ++ G++ +D ++ +++ ++
Sbjct: 129 ALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPAQIDEDMLNQHVCMHELAP 188
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DL+IRTGGE R+S+FLLWQ+AY+E F WPDF + F ALN + R+RRFGG
Sbjct: 189 VDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGG 245
>gi|318040224|ref|ZP_07972180.1| undecaprenyl pyrophosphate synthase [Synechococcus sp. CB0101]
Length = 245
Score = 185 bits (469), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 88/230 (38%), Positives = 132/230 (57%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA R LPR GHR+G+E + ++ GI LT +AFS NW R
Sbjct: 12 PAHVAVIMDGNGRWANQRKLPRVMGHREGVEALKRTLRLCSDWGIGALTAYAFSTENWSR 71
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L + L + +L++ +++R +G+ L D + ++ +A +T NTG+
Sbjct: 72 PGEEVSFLMALFERVLARELQALEEEQVRIRFLGDLEQLPDGLQQLIADATQRTAANTGI 131
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ + NY R E+ RA + + + + G + + A L T+ DPDL+IRT G
Sbjct: 132 HFNVCTNYGGRRELVRAARLLAEQVARGELDPAAITEQHFAAELFTTGEVDPDLLIRTSG 191
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E+R+S+FLLWQ+AY+E WPDF+ AL Y R RRFGG+
Sbjct: 192 EQRISNFLLWQLAYAELHITDVLWPDFNEAALTAALLDYQSRQRRFGGVE 241
>gi|326316577|ref|YP_004234249.1| Undecaprenyl pyrophosphate synthase [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323373413|gb|ADX45682.1| Undecaprenyl pyrophosphate synthase [Acidovorax avenae subsp.
avenae ATCC 19860]
Length = 244
Score = 185 bits (469), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 95/240 (39%), Positives = 135/240 (56%), Gaps = 9/240 (3%)
Query: 5 MMSSSP--PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
M ++SP P HI I+MDGNGRWA R LPR AGH++G+E E G+ LT+FA
Sbjct: 1 MSTASPAIPHHIAIVMDGNGRWATRRFLPRLAGHKQGVESLKRCARECVERGVAVLTVFA 60
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RP E+S L+ L+ L + L+K+ +++ +G + +L + + L +AE
Sbjct: 61 FSSENWNRPAEEVSGLMDLLAKALAREVPQLQKDGVRLHFVGEKSTLSEKVRAGLAQAEA 120
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T N L L + FNY R +I++A + E + + + + + VPDP
Sbjct: 121 STAHNERLVLNVCFNYGGRWDIAQAASALAARGEP-------ITEASLHTAMGLAHVPDP 173
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL+IRTGGE R+S+FLLWQ AYSE F WPDF A+ Y R+RRFG S++
Sbjct: 174 DLVIRTGGEMRISNFLLWQCAYSELYFSDRLWPDFDGAALDQAIAAYGARERRFGKTSEQ 233
>gi|237745599|ref|ZP_04576079.1| undecaprenyl pyrophosphate synthetase [Oxalobacter formigenes
HOxBLS]
gi|229376950|gb|EEO27041.1| undecaprenyl pyrophosphate synthetase [Oxalobacter formigenes
HOxBLS]
Length = 247
Score = 185 bits (469), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 97/241 (40%), Positives = 137/241 (56%), Gaps = 5/241 (2%)
Query: 3 ASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
S+ + +P P HI I+MDGNGRWA R LPR AGH +G E + I LT+F
Sbjct: 8 GSLSAIAPMPRHIAIVMDGNGRWAKKRFLPRVAGHVRGTEAIRRTIEGCIVRHIPYLTVF 67
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+ L+ L S L+K L N+I+++V+G+ D + + AE
Sbjct: 68 AFSSENWNRPNEEVGFLMNLFLSTLEKETEKLHANHIRLKVVGDTGRFDPALQKAIARAE 127
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T N+ L L + NY + +I +A++ + Q+ V D+ +A L S P
Sbjct: 128 EKTSANSALTLTVCANYGGQWDIVQAVRRLRQE----GVLEKDMTEKDLASRLALSYAPH 183
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL IRTGGEKRLS+FLLWQ+AY+E F YWPDF + A+ + R+RRFG S+
Sbjct: 184 PDLFIRTGGEKRLSNFLLWQLAYTELYFTETYWPDFDDKELEKAILAFQGRERRFGKTSE 243
Query: 242 K 242
+
Sbjct: 244 Q 244
>gi|15799856|ref|NP_285868.1| undecaprenyl pyrophosphate synthase [Escherichia coli O157:H7
EDL933]
gi|15829430|ref|NP_308203.1| undecaprenyl pyrophosphate synthase [Escherichia coli O157:H7 str.
Sakai]
gi|16128167|ref|NP_414716.1| undecaprenyl pyrophosphate synthase [Escherichia coli str. K-12
substr. MG1655]
gi|24111609|ref|NP_706119.1| undecaprenyl pyrophosphate synthase [Shigella flexneri 2a str. 301]
gi|26246120|ref|NP_752159.1| undecaprenyl pyrophosphate synthase [Escherichia coli CFT073]
gi|30061731|ref|NP_835902.1| undecaprenyl pyrophosphate synthase [Shigella flexneri 2a str.
2457T]
gi|82775564|ref|YP_401911.1| undecaprenyl pyrophosphate synthase [Shigella dysenteriae Sd197]
gi|89107054|ref|AP_000834.1| undecaprenyl pyrophosphate synthase [Escherichia coli str. K-12
substr. W3110]
gi|91209244|ref|YP_539230.1| undecaprenyl pyrophosphate synthase [Escherichia coli UTI89]
gi|110640393|ref|YP_668121.1| undecaprenyl pyrophosphate synthase [Escherichia coli 536]
gi|117622459|ref|YP_851372.1| undecaprenyl pyrophosphate synthase [Escherichia coli APEC O1]
gi|170021473|ref|YP_001726427.1| undecaprenyl pyrophosphate synthase [Escherichia coli ATCC 8739]
gi|170079810|ref|YP_001729130.1| undecaprenyl pyrophosphate synthase [Escherichia coli str. K-12
substr. DH10B]
gi|170681254|ref|YP_001742302.1| undecaprenyl pyrophosphate synthase [Escherichia coli SMS-3-5]
gi|187776344|ref|ZP_02802018.2| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC4196]
gi|188025157|ref|ZP_02776415.2| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC4113]
gi|189010417|ref|ZP_02807073.2| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC4076]
gi|189402191|ref|ZP_02780794.2| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC4401]
gi|189403434|ref|ZP_02795359.2| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC4486]
gi|189405251|ref|ZP_02814290.2| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC869]
gi|189406338|ref|ZP_02827988.2| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC508]
gi|191166374|ref|ZP_03028206.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli B7A]
gi|191172816|ref|ZP_03034353.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli F11]
gi|193063261|ref|ZP_03044352.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli E22]
gi|193067631|ref|ZP_03048598.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
E110019]
gi|194428326|ref|ZP_03060868.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli B171]
gi|194439120|ref|ZP_03071202.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli 101-1]
gi|208807554|ref|ZP_03249891.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC4206]
gi|208812136|ref|ZP_03253465.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC4045]
gi|208818308|ref|ZP_03258628.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC4042]
gi|209396854|ref|YP_002268782.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC4115]
gi|215485335|ref|YP_002327766.1| undecaprenyl pyrophosphate synthase [Escherichia coli O127:H6 str.
E2348/69]
gi|217326563|ref|ZP_03442647.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. TW14588]
gi|218547629|ref|YP_002381420.1| undecaprenyl pyrophosphate synthase [Escherichia fergusonii ATCC
35469]
gi|218552754|ref|YP_002385667.1| undecaprenyl pyrophosphate synthase [Escherichia coli IAI1]
gi|218557115|ref|YP_002390028.1| undecaprenyl pyrophosphate synthase [Escherichia coli S88]
gi|218688049|ref|YP_002396261.1| undecaprenyl pyrophosphate synthase [Escherichia coli ED1a]
gi|218693639|ref|YP_002401306.1| undecaprenyl pyrophosphate synthase [Escherichia coli 55989]
gi|218698594|ref|YP_002406223.1| undecaprenyl pyrophosphate synthase [Escherichia coli IAI39]
gi|218703428|ref|YP_002410947.1| undecaprenyl pyrophosphate synthase [Escherichia coli UMN026]
gi|227884913|ref|ZP_04002718.1| undecaprenyl pyrophosphate synthase [Escherichia coli 83972]
gi|237704333|ref|ZP_04534814.1| undecaprenyl pyrophosphate synthase [Escherichia sp. 3_2_53FAA]
gi|238899572|ref|YP_002925368.1| undecaprenyl pyrophosphate synthase [Escherichia coli BW2952]
gi|254037593|ref|ZP_04871670.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia sp. 1_1_43]
gi|254160293|ref|YP_003043401.1| undecaprenyl pyrophosphate synthase [Escherichia coli B str.
REL606]
gi|254791307|ref|YP_003076144.1| undecaprenyl pyrophosphate synthase [Escherichia coli O157:H7 str.
TW14359]
gi|260842406|ref|YP_003220184.1| undecaprenyl pyrophosphate synthase [Escherichia coli O103:H2 str.
12009]
gi|291280996|ref|YP_003497814.1| Undecaprenyl pyrophosphate synthetase [Escherichia coli O55:H7 str.
CB9615]
gi|293403243|ref|ZP_06647340.1| undecaprenyl pyrophosphate synthetase [Escherichia coli FVEC1412]
gi|293418059|ref|ZP_06660681.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli B185]
gi|298378779|ref|ZP_06988663.1| undecaprenyl pyrophosphate synthase [Escherichia coli FVEC1302]
gi|301028667|ref|ZP_07191888.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
196-1]
gi|331640628|ref|ZP_08341776.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli H736]
gi|331645317|ref|ZP_08346428.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli M605]
gi|331651079|ref|ZP_08352107.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli M718]
gi|331661245|ref|ZP_08362177.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli TA206]
gi|331661548|ref|ZP_08362472.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli TA143]
gi|331666415|ref|ZP_08367296.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli TA271]
gi|331671680|ref|ZP_08372478.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli TA280]
gi|331680753|ref|ZP_08381412.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli H591]
gi|331681559|ref|ZP_08382196.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli H299]
gi|332282848|ref|ZP_08395261.1| undecaprenyl pyrophosphate synthetase [Shigella sp. D9]
gi|42560512|sp|P60472|UPPS_ECOLI RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|42560513|sp|P60473|UPPS_ECOL6 RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|42560514|sp|P60474|UPPS_ECO57 RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|42560515|sp|P60475|UPPS_SHIFL RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|34810685|pdb|1UEH|A Chain A, E. Coli Undecaprenyl Pyrophosphate Synthase In Complex
With Triton X-100, Magnesium And Sulfate
gi|34810686|pdb|1UEH|B Chain B, E. Coli Undecaprenyl Pyrophosphate Synthase In Complex
With Triton X-100, Magnesium And Sulfate
gi|42543896|pdb|1V7U|A Chain A, Crystal Structure Of Undecaprenyl Pyrophosphate Synthase
With Farnesyl Pyrophosphate
gi|42543897|pdb|1V7U|B Chain B, Crystal Structure Of Undecaprenyl Pyrophosphate Synthase
With Farnesyl Pyrophosphate
gi|62738378|pdb|1X06|A Chain A, Crystal Structure Of Undecaprenyl Pyrophosphate Synthase
In Complex With Mg, Ipp And Fspp
gi|62738379|pdb|1X07|A Chain A, Crystal Structure Of Undecaprenyl Pyrophosphate Synthase
In Complex With Mg And Ipp
gi|149241390|pdb|2E98|A Chain A, E. Coli Undecaprenyl Pyrophosphate Synthase In Complex
With Bph-629
gi|149241391|pdb|2E98|B Chain B, E. Coli Undecaprenyl Pyrophosphate Synthase In Complex
With Bph-629
gi|149241395|pdb|2E99|A Chain A, E. Coli Undecaprenyl Pyrophosphate Synthase In Complex
With Bph-608
gi|149241396|pdb|2E99|B Chain B, E. Coli Undecaprenyl Pyrophosphate Synthase In Complex
With Bph-608
gi|149241399|pdb|2E9A|A Chain A, E. Coli Undecaprenyl Pyrophosphate Synthase In Complex
With Bph-628
gi|149241400|pdb|2E9A|B Chain B, E. Coli Undecaprenyl Pyrophosphate Synthase In Complex
With Bph-628
gi|149241403|pdb|2E9C|A Chain A, E. Coli Undecaprenyl Pyrophosphate Synthase In Complex
With Bph-675
gi|149241404|pdb|2E9C|B Chain B, E. Coli Undecaprenyl Pyrophosphate Synthase In Complex
With Bph-675
gi|149241407|pdb|2E9D|A Chain A, E. Coli Undecaprenyl Pyrophosphate Synthase In Complex
With Bph-676
gi|149241408|pdb|2E9D|B Chain B, E. Coli Undecaprenyl Pyrophosphate Synthase In Complex
With Bph-676
gi|325534033|pdb|3QAS|B Chain B, Structure Of Undecaprenyl Diphosphate Synthase
gi|325534034|pdb|3QAS|A Chain A, Structure Of Undecaprenyl Diphosphate Synthase
gi|12512899|gb|AAG54476.1|AE005193_6 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
gi|26106517|gb|AAN78703.1|AE016755_203 Undecaprenyl pyrophosphate synthetase [Escherichia coli CFT073]
gi|1786371|gb|AAC73285.1| undecaprenyl pyrophosphate synthase [Escherichia coli str. K-12
substr. MG1655]
gi|13359632|dbj|BAB33599.1| undecaprenyl pyrophosphate synthetase [Escherichia coli O157:H7
str. Sakai]
gi|24050377|gb|AAN41826.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|30039973|gb|AAP15707.1| hypothetical protein S0167 [Shigella flexneri 2a str. 2457T]
gi|81239712|gb|ABB60422.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
gi|85674367|dbj|BAA77849.2| undecaprenyl pyrophosphate synthase [Escherichia coli str. K12
substr. W3110]
gi|91070818|gb|ABE05699.1| subunit of undecaprenyl diphosphate synthase [Escherichia coli
UTI89]
gi|110341985|gb|ABG68222.1| undecaprenyl pyrophosphate synthetase [Escherichia coli 536]
gi|115511583|gb|ABI99657.1| conserved hypothetical protein [Escherichia coli APEC O1]
gi|169756401|gb|ACA79100.1| undecaprenyl diphosphate synthase [Escherichia coli ATCC 8739]
gi|169887645|gb|ACB01352.1| undecaprenyl pyrophosphate synthase [Escherichia coli str. K-12
substr. DH10B]
gi|170518972|gb|ACB17150.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
SMS-3-5]
gi|187767684|gb|EDU31528.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC4196]
gi|188014574|gb|EDU52696.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC4113]
gi|189000390|gb|EDU69376.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC4076]
gi|189357032|gb|EDU75451.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC4401]
gi|189360694|gb|EDU79113.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC4486]
gi|189371076|gb|EDU89492.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC869]
gi|189375226|gb|EDU93642.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC508]
gi|190903625|gb|EDV63342.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli B7A]
gi|190906966|gb|EDV66568.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli F11]
gi|192931169|gb|EDV83772.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli E22]
gi|192959043|gb|EDV89479.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
E110019]
gi|194413701|gb|EDX29981.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli B171]
gi|194421939|gb|EDX37944.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli 101-1]
gi|208727355|gb|EDZ76956.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC4206]
gi|208733413|gb|EDZ82100.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC4045]
gi|208738431|gb|EDZ86113.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC4042]
gi|209158254|gb|ACI35687.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC4115]
gi|209745804|gb|ACI71209.1| undecaprenyl pyrophosphate synthetase [Escherichia coli]
gi|209745806|gb|ACI71210.1| undecaprenyl pyrophosphate synthetase [Escherichia coli]
gi|209745808|gb|ACI71211.1| undecaprenyl pyrophosphate synthetase [Escherichia coli]
gi|209745810|gb|ACI71212.1| undecaprenyl pyrophosphate synthetase [Escherichia coli]
gi|209745812|gb|ACI71213.1| undecaprenyl pyrophosphate synthetase [Escherichia coli]
gi|215263407|emb|CAS07727.1| undecaprenyl pyrophosphate synthase [Escherichia coli O127:H6 str.
E2348/69]
gi|217322784|gb|EEC31208.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. TW14588]
gi|218350371|emb|CAU96054.1| undecaprenyl pyrophosphate synthase [Escherichia coli 55989]
gi|218355170|emb|CAQ87777.1| undecaprenyl pyrophosphate synthase [Escherichia fergusonii ATCC
35469]
gi|218359522|emb|CAQ97060.1| undecaprenyl pyrophosphate synthase [Escherichia coli IAI1]
gi|218363884|emb|CAR01549.1| undecaprenyl pyrophosphate synthase [Escherichia coli S88]
gi|218368580|emb|CAR16317.1| undecaprenyl pyrophosphate synthase [Escherichia coli IAI39]
gi|218425613|emb|CAR06399.1| undecaprenyl pyrophosphate synthase [Escherichia coli ED1a]
gi|218430525|emb|CAR11391.1| undecaprenyl pyrophosphate synthase [Escherichia coli UMN026]
gi|222032004|emb|CAP74743.1| Undecaprenyl pyrophosphate synthetase [Escherichia coli LF82]
gi|226840699|gb|EEH72701.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia sp. 1_1_43]
gi|226902245|gb|EEH88504.1| undecaprenyl pyrophosphate synthase [Escherichia sp. 3_2_53FAA]
gi|227838051|gb|EEJ48517.1| undecaprenyl pyrophosphate synthase [Escherichia coli 83972]
gi|238863761|gb|ACR65759.1| undecaprenyl pyrophosphate synthase [Escherichia coli BW2952]
gi|242376005|emb|CAQ30688.1| undecaprenyl diphosphate synthase [Escherichia coli BL21(DE3)]
gi|253972194|gb|ACT37865.1| undecaprenyl pyrophosphate synthase [Escherichia coli B str.
REL606]
gi|253976403|gb|ACT42073.1| undecaprenyl pyrophosphate synthase [Escherichia coli BL21(DE3)]
gi|254590707|gb|ACT70068.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase)
[Escherichia coli O157:H7 str. TW14359]
gi|257757553|dbj|BAI29050.1| undecaprenyl pyrophosphate synthase [Escherichia coli O103:H2 str.
12009]
gi|281177399|dbj|BAI53729.1| undecaprenyl pyrophosphate synthetase [Escherichia coli SE15]
gi|281599529|gb|ADA72513.1| Undecaprenyl pyrophosphate synthetase [Shigella flexneri 2002017]
gi|284919949|emb|CBG33004.1| undecaprenyl pyrophosphate synthetase [Escherichia coli 042]
gi|290760869|gb|ADD54830.1| Undecaprenyl pyrophosphate synthetase [Escherichia coli O55:H7 str.
CB9615]
gi|291430158|gb|EFF03172.1| undecaprenyl pyrophosphate synthetase [Escherichia coli FVEC1412]
gi|291430777|gb|EFF03775.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli B185]
gi|298281113|gb|EFI22614.1| undecaprenyl pyrophosphate synthase [Escherichia coli FVEC1302]
gi|299878299|gb|EFI86510.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
196-1]
gi|307552024|gb|ADN44799.1| subunit of undecaprenyl diphosphate synthase [Escherichia coli ABU
83972]
gi|309700382|emb|CBI99670.1| undecaprenyl pyrophosphate synthetase [Escherichia coli ETEC
H10407]
gi|315134864|dbj|BAJ42023.1| undecaprenyl pyrophosphate synthase [Escherichia coli DH1]
gi|320180920|gb|EFW55842.1| Undecaprenyl pyrophosphate synthetase [Shigella boydii ATCC 9905]
gi|320190300|gb|EFW64950.1| Undecaprenyl pyrophosphate synthetase [Escherichia coli O157:H7
str. EC1212]
gi|320196950|gb|EFW71571.1| Undecaprenyl pyrophosphate synthetase [Escherichia coli WV_060327]
gi|320200301|gb|EFW74887.1| Undecaprenyl pyrophosphate synthetase [Escherichia coli EC4100B]
gi|323935014|gb|EGB31387.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli E1520]
gi|323939950|gb|EGB36148.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli E482]
gi|323945649|gb|EGB41698.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli H120]
gi|323950827|gb|EGB46704.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli H252]
gi|323955135|gb|EGB50910.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli H263]
gi|323959935|gb|EGB55582.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli H489]
gi|323970653|gb|EGB65909.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli TA007]
gi|323975658|gb|EGB70754.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
TW10509]
gi|324112415|gb|EGC06392.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia fergusonii
B253]
gi|324118294|gb|EGC12189.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli E1167]
gi|326339771|gb|EGD63579.1| Undecaprenyl pyrophosphate synthetase [Escherichia coli O157:H7
str. 1044]
gi|326345106|gb|EGD68849.1| Undecaprenyl pyrophosphate synthetase [Escherichia coli O157:H7
str. 1125]
gi|330910024|gb|EGH38534.1| undecaprenyl pyrophosphate synthetase [Escherichia coli AA86]
gi|331040374|gb|EGI12581.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli H736]
gi|331046074|gb|EGI18193.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli M605]
gi|331051533|gb|EGI23582.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli M718]
gi|331052287|gb|EGI24326.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli TA206]
gi|331061463|gb|EGI33426.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli TA143]
gi|331066626|gb|EGI38503.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli TA271]
gi|331071525|gb|EGI42882.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli TA280]
gi|331072216|gb|EGI43552.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli H591]
gi|331081780|gb|EGI52941.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli H299]
gi|332105200|gb|EGJ08546.1| undecaprenyl pyrophosphate synthetase [Shigella sp. D9]
Length = 253
Score = 185 bits (469), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 89/226 (39%), Positives = 139/226 (61%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++AFS NW RP
Sbjct: 20 HVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPA 79
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+S L++L L SL ++N+++R+IG+ + + ++++E T NTGL L
Sbjct: 80 QEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTL 139
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA NY R +I + ++ + + ++ G++ +D ++ +++ ++ DL+IRTGGE
Sbjct: 140 NIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGEH 199
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R+S+FLLWQ+AY+E F WPDF + F ALN + R+RRFGG
Sbjct: 200 RISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGG 245
>gi|323964933|gb|EGB60399.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli M863]
Length = 253
Score = 185 bits (469), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 89/226 (39%), Positives = 139/226 (61%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++AFS NW RP
Sbjct: 20 HVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPA 79
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+S L++L L SL ++N+++R+IG+ + + ++++E T NTGL L
Sbjct: 80 QEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTL 139
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA NY R +I + ++ + + ++ G++ +D ++ +++ ++ DL+IRTGGE
Sbjct: 140 NIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGEH 199
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R+S+FLLWQ+AY+E F WPDF + F ALN + R+RRFGG
Sbjct: 200 RISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGG 245
>gi|227488412|ref|ZP_03918728.1| undecaprenyl pyrophosphate synthase [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227091626|gb|EEI26938.1| undecaprenyl pyrophosphate synthase [Corynebacterium
glucuronolyticum ATCC 51867]
Length = 240
Score = 185 bits (469), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 90/228 (39%), Positives = 135/228 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI ++MDGNGRWA RG+ R GH++G V +I+ A E+GI +L+ +AFS NWRR
Sbjct: 11 PNHIALVMDGNGRWAQERGMVRTEGHKRGEAVLMDIIDACLELGIPHLSAYAFSTENWRR 70
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + L + L + ++VR G R L ++ L+ AE+ T+ NT +
Sbjct: 71 TADEVRFLMGFNRDVLHRQRDVLNEKGVRVRWAGRRPRLWRSVIRELELAEEMTKENTRM 130
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
++ NY R EI A + I + ++G++ V A++LD +PD DL +R G
Sbjct: 131 TFYMCVNYGGRAEIVDAAREIARRAQAGTLRPEQVTEKTFAQFLDEPGMPDVDLFLRPSG 190
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
EKR S+FLLWQ AY+E V+ +PDF++E + A +Y RDRRFGG
Sbjct: 191 EKRTSNFLLWQSAYAEMVYQNTLFPDFTKENLYDACLEYAKRDRRFGG 238
>gi|295698559|ref|YP_003603214.1| undecaprenyl diphosphate synthase [Candidatus Riesia pediculicola
USDA]
gi|291157479|gb|ADD79924.1| undecaprenyl diphosphate synthase [Candidatus Riesia pediculicola
USDA]
Length = 252
Score = 185 bits (469), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 97/229 (42%), Positives = 134/229 (58%), Gaps = 1/229 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGN RWA G GH G+ + + A I +LT+FAFS NW R
Sbjct: 17 PKHVAIIMDGNRRWAKRNGKSTIQGHIAGVTSAQKAIKYALNNNIVSLTLFAFSKENWNR 76
Query: 71 PVSEISELVKLIKSFL-KKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
EIS L++L FL KK F K +NI++ +IG I ++ + T+ N
Sbjct: 77 SEKEISSLIRLFSFFLGKKTFERFKIHNIRLFIIGEINQFGKSIQKKVQNIVNLTKNNIK 136
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
LNL IA NYS R +I R+IK I + ++ GS+ D+ I +++ +D PD DL+IRTG
Sbjct: 137 LNLNIAVNYSGRWDILRSIKTIIKKVQEGSILIEDIREHTINRFICLNDQPDVDLVIRTG 196
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E R+S+FLLWQ+AYSE F WPDF+ E+F A+ +N+R+RRFG
Sbjct: 197 REYRISNFLLWQIAYSELYFTDILWPDFTEEVFQEAITNFNMRERRFGN 245
>gi|328676313|gb|AEB27183.1| Undecaprenyl pyrophosphate synthetase [Francisella cf. novicida
Fx1]
Length = 240
Score = 185 bits (469), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 94/225 (41%), Positives = 137/225 (60%), Gaps = 1/225 (0%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA +R PR GHR + + + E I+ LT+FAF +NW RP
Sbjct: 11 HLAIIMDGNGRWAKSRLKPRIFGHRNSVSSVDATIEYCVENNIEMLTLFAFGRDNWLRPA 70
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+S+L+ L LK L NNI V V+G+R L D ++ +++ +E T+ NTGL L
Sbjct: 71 QEVSDLMDLFYKTLKDKTPKLHDNNIVVTVVGDRSRLSDKLIGMIEYSESLTKSNTGLKL 130
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A +Y+ R +I A + I ++++ G + ++D + AKYL ++P DL+IRT GE
Sbjct: 131 RLAVDYAGRWDIVEATRAIAREVDIGKLSVDEIDQNSFAKYLVGGNMP-VDLLIRTSGEV 189
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RLSDF+LWQ+AY+E F WPDFS++ A+ + R RRFG
Sbjct: 190 RLSDFMLWQLAYAEMYFTDIMWPDFSKQELTRAVEYFYSRQRRFG 234
>gi|294635125|ref|ZP_06713636.1| di-trans,poly-cis-decaprenylcistransferase [Edwardsiella tarda ATCC
23685]
gi|291091502|gb|EFE24063.1| di-trans,poly-cis-decaprenylcistransferase [Edwardsiella tarda ATCC
23685]
Length = 245
Score = 185 bits (469), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 92/234 (39%), Positives = 136/234 (58%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
++S P H+ IIMDGNGRWA +G R GH+ G++ V A GI+ LT++AFS
Sbjct: 4 AASVPRHVAIIMDGNGRWAKRQGKMRVFGHKAGVKSVRCAVRFAVARGIRALTLYAFSSE 63
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP E+S L++L L L K+ +++RVIG+ + ++ +E T
Sbjct: 64 NWNRPQQEVSALMELFVRALDSEVKRLHKHQVRLRVIGDISRFSPRLQERIRRSEQMTAA 123
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N GL L IA NY R +I + +K + + ++ G++ + +++ + + D DL+I
Sbjct: 124 NEGLTLNIAANYGGRWDIVQGVKVLAERVQQGTLAPEAISEAMLGEQVCLHDQDAVDLVI 183
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RTGGE R+S+FLLWQ+AYSEF F WPDF F ALN + R+RRFGG +
Sbjct: 184 RTGGEHRVSNFLLWQIAYSEFYFTDVLWPDFDETTFEGALNAFAQRERRFGGTT 237
>gi|171059527|ref|YP_001791876.1| undecaprenyl diphosphate synthase [Leptothrix cholodnii SP-6]
gi|170776972|gb|ACB35111.1| undecaprenyl diphosphate synthase [Leptothrix cholodnii SP-6]
Length = 257
Score = 185 bits (469), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 139/232 (59%), Gaps = 4/232 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
++SS P H+ I+MDGNGRWA R +PR GH+ G++ I+ A A+ GI +LT+FAFS
Sbjct: 11 LTSSLPRHVAIVMDGNGRWANRRLMPRVVGHKFGVDALIRIINACADRGIGHLTVFAFSS 70
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+S L+ L+ + K + ++ +++R+IG+R + + EAE T
Sbjct: 71 ENWNRPQEEVSGLMNLVLVAVSKYLARMAEDGVRIRIIGDRAEVSQKVRTAWDEAERLTE 130
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N + + +AFNY R ++ +A + + + SG V + +D + +++++ + PDPD
Sbjct: 131 NNRRITVSVAFNYGGRWDVVQACRAL---VASG-VTADQIDEAALSRHMSLAYAPDPDFF 186
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRTGGE R+S+FLLWQ AYSE F WPDF AL Y RDRRFG
Sbjct: 187 IRTGGEVRISNFLLWQAAYSELYFTDCLWPDFDERALDAALADYASRDRRFG 238
>gi|15605177|ref|NP_219963.1| undecaprenyl pyrophosphate synthase [Chlamydia trachomatis
D/UW-3/CX]
gi|76789186|ref|YP_328272.1| undecaprenyl pyrophosphate synthetase [Chlamydia trachomatis
A/HAR-13]
gi|166154664|ref|YP_001654782.1| undecaprenyl pyrophosphate synthetase [Chlamydia trachomatis
434/Bu]
gi|166155539|ref|YP_001653794.1| undecaprenyl pyrophosphate synthetase [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|237802878|ref|YP_002888072.1| undecaprenyl pyrophosphate synthase [Chlamydia trachomatis
B/Jali20/OT]
gi|237804800|ref|YP_002888954.1| undecaprenyl pyrophosphate synthase [Chlamydia trachomatis
B/TZ1A828/OT]
gi|255311261|ref|ZP_05353831.1| undecaprenyl pyrophosphate synthetase [Chlamydia trachomatis 6276]
gi|255317563|ref|ZP_05358809.1| undecaprenyl pyrophosphate synthetase [Chlamydia trachomatis 6276s]
gi|255348822|ref|ZP_05380829.1| undecaprenyl pyrophosphate synthetase [Chlamydia trachomatis 70]
gi|255503362|ref|ZP_05381752.1| undecaprenyl pyrophosphate synthetase [Chlamydia trachomatis 70s]
gi|255507040|ref|ZP_05382679.1| undecaprenyl pyrophosphate synthetase [Chlamydia trachomatis
D(s)2923]
gi|301335933|ref|ZP_07224177.1| undecaprenyl pyrophosphate synthase [Chlamydia trachomatis L2tet1]
gi|6647881|sp|O84456|UPPS_CHLTR RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|3328883|gb|AAC68050.1| YaeS family [Chlamydia trachomatis D/UW-3/CX]
gi|76167716|gb|AAX50724.1| undecaprenyl pyrophosphate synthetase [Chlamydia trachomatis
A/HAR-13]
gi|165930652|emb|CAP04149.1| undecaprenyl pyrophosphate synthetase [Chlamydia trachomatis
434/Bu]
gi|165931527|emb|CAP07103.1| undecaprenyl pyrophosphate synthetase [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|231273100|emb|CAX10013.1| undecaprenyl pyrophosphate synthetase [Chlamydia trachomatis
B/TZ1A828/OT]
gi|231274112|emb|CAX10906.1| undecaprenyl pyrophosphate synthetase [Chlamydia trachomatis
B/Jali20/OT]
gi|289525495|emb|CBJ14972.1| undecaprenyl pyrophosphate synthetase [Chlamydia trachomatis
Sweden2]
gi|296435050|gb|ADH17228.1| undecaprenyl pyrophosphate synthase [Chlamydia trachomatis E/150]
gi|296435977|gb|ADH18151.1| undecaprenyl pyrophosphate synthase [Chlamydia trachomatis G/9768]
gi|296436904|gb|ADH19074.1| undecaprenyl pyrophosphate synthase [Chlamydia trachomatis G/11222]
gi|296437838|gb|ADH19999.1| undecaprenyl pyrophosphate synthase [Chlamydia trachomatis G/11074]
gi|296438770|gb|ADH20923.1| undecaprenyl pyrophosphate synthase [Chlamydia trachomatis E/11023]
gi|297140338|gb|ADH97096.1| undecaprenyl pyrophosphate synthase [Chlamydia trachomatis G/9301]
gi|297748581|gb|ADI51127.1| Undecaprenyl pyrophosphate synthetase [Chlamydia trachomatis D-EC]
gi|297749461|gb|ADI52139.1| Undecaprenyl pyrophosphate synthetase [Chlamydia trachomatis D-LC]
Length = 253
Score = 185 bits (469), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 96/237 (40%), Positives = 136/237 (57%), Gaps = 10/237 (4%)
Query: 8 SSPPDHIGIIMDGNGRW-------AAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+S P HI IIMDGN RW R + +GHR+G + +IV A +G++ LT+
Sbjct: 19 NSLPRHIAIIMDGNRRWQRKHEQFCQKRAI---SGHRQGADSIPQIVDTALHLGVEALTL 75
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS N+ R SE++EL L S L+ L I++R IG+ L ++ +++A
Sbjct: 76 FAFSTENFSRSKSEVAELFSLFNSQLRSKLSFLHDREIRLRCIGDLSKLPQELQNNIEQA 135
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
T + + L A NY S+DE+ RA K + QD+ S + +D+ LI+ YLDTS +P
Sbjct: 136 SSATAHYSRMELIFAINYGSKDELVRAFKELHQDLASKKISVNDISEELISSYLDTSGLP 195
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DPDL+IRTGGE R+S+FLLWQ+AY+E WPDF+ A+ Y R RR G
Sbjct: 196 DPDLLIRTGGEMRVSNFLLWQIAYTELYVTDVLWPDFTANDLLEAIKTYQQRSRRGG 252
>gi|110804226|ref|YP_687746.1| undecaprenyl pyrophosphate synthase [Shigella flexneri 5 str. 8401]
gi|157155987|ref|YP_001461343.1| undecaprenyl pyrophosphate synthase [Escherichia coli E24377A]
gi|157159639|ref|YP_001456957.1| undecaprenyl pyrophosphate synthase [Escherichia coli HS]
gi|195938144|ref|ZP_03083526.1| undecaprenyl pyrophosphate synthase [Escherichia coli O157:H7 str.
EC4024]
gi|209917364|ref|YP_002291448.1| undecaprenyl pyrophosphate synthase [Escherichia coli SE11]
gi|253774799|ref|YP_003037630.1| undecaprenyl pyrophosphate synthase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|256021606|ref|ZP_05435471.1| undecaprenyl pyrophosphate synthase [Shigella sp. D9]
gi|256025486|ref|ZP_05439351.1| undecaprenyl pyrophosphate synthase [Escherichia sp. 4_1_40B]
gi|261226928|ref|ZP_05941209.1| undecaprenyl diphosphate synthase [Escherichia coli O157:H7 str.
FRIK2000]
gi|261255332|ref|ZP_05947865.1| undecaprenyl diphosphate synthase [Escherichia coli O157:H7 str.
FRIK966]
gi|293408266|ref|ZP_06652106.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli B354]
gi|293476831|ref|ZP_06665239.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli B088]
gi|297518954|ref|ZP_06937340.1| undecaprenyl pyrophosphate synthase [Escherichia coli OP50]
gi|300816214|ref|ZP_07096437.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
107-1]
gi|300901993|ref|ZP_07120020.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
84-1]
gi|300932128|ref|ZP_07147413.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
187-1]
gi|300938581|ref|ZP_07153314.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
21-1]
gi|300956057|ref|ZP_07168382.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
175-1]
gi|301305310|ref|ZP_07211406.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
124-1]
gi|301646497|ref|ZP_07246372.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
146-1]
gi|306815226|ref|ZP_07449375.1| undecaprenyl pyrophosphate synthase [Escherichia coli NC101]
gi|307136774|ref|ZP_07496130.1| undecaprenyl pyrophosphate synthase [Escherichia coli H736]
gi|307311379|ref|ZP_07591021.1| undecaprenyl diphosphate synthase [Escherichia coli W]
gi|309787152|ref|ZP_07681764.1| di-trans,poly-cis-decaprenylcistransferase [Shigella dysenteriae
1617]
gi|309796351|ref|ZP_07690760.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
145-7]
gi|1552751|gb|AAB08603.1| hypothetical protein [Escherichia coli]
gi|110613774|gb|ABF02441.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|157065319|gb|ABV04574.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli HS]
gi|157078017|gb|ABV17725.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
E24377A]
gi|209910623|dbj|BAG75697.1| undecaprenyl pyrophosphate synthase [Escherichia coli SE11]
gi|253325843|gb|ACT30445.1| undecaprenyl diphosphate synthase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|260450622|gb|ACX41044.1| undecaprenyl diphosphate synthase [Escherichia coli DH1]
gi|291321284|gb|EFE60726.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli B088]
gi|291472517|gb|EFF14999.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli B354]
gi|294493737|gb|ADE92493.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
IHE3034]
gi|300317087|gb|EFJ66871.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
175-1]
gi|300405879|gb|EFJ89417.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
84-1]
gi|300456463|gb|EFK19956.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
21-1]
gi|300460104|gb|EFK23597.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
187-1]
gi|300531421|gb|EFK52483.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
107-1]
gi|300839415|gb|EFK67175.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
124-1]
gi|301075283|gb|EFK90089.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
146-1]
gi|305850888|gb|EFM51343.1| undecaprenyl pyrophosphate synthase [Escherichia coli NC101]
gi|306908358|gb|EFN38856.1| undecaprenyl diphosphate synthase [Escherichia coli W]
gi|307629750|gb|ADN74054.1| undecaprenyl pyrophosphate synthase [Escherichia coli UM146]
gi|308120055|gb|EFO57317.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
145-7]
gi|308924730|gb|EFP70225.1| di-trans,poly-cis-decaprenylcistransferase [Shigella dysenteriae
1617]
gi|312944782|gb|ADR25609.1| undecaprenyl pyrophosphate synthase [Escherichia coli O83:H1 str.
NRG 857C]
gi|315059392|gb|ADT73719.1| undecaprenyl pyrophosphate synthase [Escherichia coli W]
gi|315254976|gb|EFU34944.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
85-1]
gi|320639980|gb|EFX09565.1| undecaprenyl pyrophosphate synthase [Escherichia coli O157:H7 str.
G5101]
gi|320644750|gb|EFX13794.1| undecaprenyl pyrophosphate synthase [Escherichia coli O157:H- str.
493-89]
gi|320652906|gb|EFX21144.1| undecaprenyl pyrophosphate synthase [Escherichia coli O157:H- str.
H 2687]
gi|320658294|gb|EFX26023.1| undecaprenyl pyrophosphate synthase [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320663604|gb|EFX30888.1| undecaprenyl pyrophosphate synthase [Escherichia coli O55:H7 str.
USDA 5905]
gi|320668917|gb|EFX35712.1| undecaprenyl pyrophosphate synthase [Escherichia coli O157:H7 str.
LSU-61]
gi|323160207|gb|EFZ46166.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
E128010]
gi|323170965|gb|EFZ56614.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli LT-68]
gi|323181681|gb|EFZ67095.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli 1357]
gi|323190426|gb|EFZ75701.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
RN587/1]
gi|323380049|gb|ADX52317.1| undecaprenyl diphosphate synthase [Escherichia coli KO11]
gi|324017819|gb|EGB87038.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
117-3]
gi|332095112|gb|EGJ00144.1| di-trans,poly-cis-decaprenylcistransferase [Shigella boydii
5216-82]
gi|332341507|gb|AEE54841.1| undecaprenyl pyrophosphate synthase YaeS [Escherichia coli UMNK88]
gi|332762047|gb|EGJ92318.1| di-trans,poly-cis-decaprenylcistransferase [Shigella flexneri
2747-71]
gi|332762177|gb|EGJ92446.1| di-trans,poly-cis-decaprenylcistransferase [Shigella flexneri
4343-70]
gi|332765021|gb|EGJ95249.1| di-trans,poly-cis-decaprenylcistransferase [Shigella flexneri
K-671]
gi|332768676|gb|EGJ98856.1| di-trans,poly-cis-decaprenylcistransferase [Shigella flexneri
2930-71]
gi|333009097|gb|EGK28553.1| di-trans,poly-cis-decaprenylcistransferase [Shigella flexneri
K-218]
gi|333010668|gb|EGK30101.1| di-trans,poly-cis-decaprenylcistransferase [Shigella flexneri VA-6]
gi|333011012|gb|EGK30431.1| di-trans,poly-cis-decaprenylcistransferase [Shigella flexneri
K-272]
gi|333021807|gb|EGK41056.1| di-trans,poly-cis-decaprenylcistransferase [Shigella flexneri
K-227]
gi|333022225|gb|EGK41464.1| di-trans,poly-cis-decaprenylcistransferase [Shigella flexneri
K-304]
Length = 252
Score = 185 bits (469), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 89/226 (39%), Positives = 139/226 (61%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++AFS NW RP
Sbjct: 19 HVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPA 78
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+S L++L L SL ++N+++R+IG+ + + ++++E T NTGL L
Sbjct: 79 QEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTL 138
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA NY R +I + ++ + + ++ G++ +D ++ +++ ++ DL+IRTGGE
Sbjct: 139 NIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGEH 198
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R+S+FLLWQ+AY+E F WPDF + F ALN + R+RRFGG
Sbjct: 199 RISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGG 244
>gi|254442949|ref|ZP_05056425.1| undecaprenyl diphosphate synthase [Verrucomicrobiae bacterium
DG1235]
gi|198257257|gb|EDY81565.1| undecaprenyl diphosphate synthase [Verrucomicrobiae bacterium
DG1235]
Length = 249
Score = 185 bits (469), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 134/227 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA RG R GH++G + + A E+G++ LT++AFS NW R
Sbjct: 11 PQHIGIIMDGNGRWAKQRGHSRPRGHKEGAKATRRAIDACQELGVRYLTLYAFSAENWNR 70
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L++ FL + +L K I++ IG L L++A D T
Sbjct: 71 PDFEVKALMELLELFLARETKTLIKRRIRLHAIGRIEELPASANKALRKAIDATAEFDDW 130
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L +A NYSSR+E+ A ++ + + +G + D A++L T+ +PDPDLIIRT G
Sbjct: 131 HLVLALNYSSRNEVLDAARSFAKSVAAGEIDPDKTDWDGFAQHLYTAGLPDPDLIIRTSG 190
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+FLL Q AY+EF F WPDF + A+ Y R+RRFG
Sbjct: 191 ETRVSNFLLMQSAYAEFYFTETLWPDFDKSHLEKAIASYRNRERRFG 237
>gi|323165875|gb|EFZ51657.1| di-trans,poly-cis-decaprenylcistransferase [Shigella sonnei 53G]
Length = 252
Score = 185 bits (469), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 89/226 (39%), Positives = 139/226 (61%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++AFS NW RP
Sbjct: 19 HVAIIMDGNGRWAKKQGRIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPA 78
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+S L++L L SL ++N+++R+IG+ + + ++++E T NTGL L
Sbjct: 79 QEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTL 138
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA NY R +I + ++ + + ++ G++ +D ++ +++ ++ DL+IRTGGE
Sbjct: 139 NIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGEH 198
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R+S+FLLWQ+AY+E F WPDF + F ALN + R+RRFGG
Sbjct: 199 RISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGG 244
>gi|312970274|ref|ZP_07784456.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
1827-70]
gi|310337772|gb|EFQ02883.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
1827-70]
Length = 252
Score = 185 bits (469), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 89/226 (39%), Positives = 139/226 (61%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++AFS NW RP
Sbjct: 19 HVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPA 78
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+S L++L L SL ++N+++R+IG+ + + ++++E T NTGL L
Sbjct: 79 QEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTL 138
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA NY R +I + ++ + + ++ G++ +D ++ +++ ++ DL+IRTGGE
Sbjct: 139 NIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGEH 198
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R+S+FLLWQ+AY+E F WPDF + F ALN + R+RRFGG
Sbjct: 199 RISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGG 244
>gi|268679085|ref|YP_003303516.1| undecaprenyl diphosphate synthase [Sulfurospirillum deleyianum DSM
6946]
gi|268617116|gb|ACZ11481.1| undecaprenyl diphosphate synthase [Sulfurospirillum deleyianum DSM
6946]
Length = 228
Score = 185 bits (469), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 92/227 (40%), Positives = 137/227 (60%), Gaps = 7/227 (3%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ +IMDGNGRWA +G R GH++G + EI A+++GIK LT++AFS NW RP
Sbjct: 6 HLAMIMDGNGRWAKRQGKERSFGHKEGAKKVREITKYASKMGIKYLTLYAFSTENWNRPK 65
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+E++ L+KL+ +L +L +NNI+ VIG+ + + A++QT TGL
Sbjct: 66 AEVAVLMKLLSKYLHSEIPTLLENNIRFDVIGDMSKFSTTLQQEIVYAKEQTAHCTGLTQ 125
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A NY + DEI RAI+ + ++ ++ +LDT+ +P DL+IRTGG+
Sbjct: 126 VLAINYGAHDEILRAIQKSLH-------VNGEITKEILESHLDTAGMPPVDLLIRTGGDG 178
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLS+FLLWQVAY+E F WPDFS +++Y R+RRFG +
Sbjct: 179 RLSNFLLWQVAYAELFFSKTLWPDFSVGELETIVSEYTQRERRFGAV 225
>gi|145589628|ref|YP_001156225.1| undecaprenyl diphosphate synthase [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
gi|145048034|gb|ABP34661.1| Undecaprenyl pyrophosphate synthetase [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
Length = 257
Score = 185 bits (469), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 137/232 (59%), Gaps = 2/232 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA+ R +PR AGH +G+ +IV +VG++ LT+FAFS NWRR
Sbjct: 18 PRHVAIIMDGNGRWASKRLMPRVAGHSEGLGAVRKIVQECRKVGVEYLTVFAFSSENWRR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL LK L +N+I +R+IG+ D I +++ +E +T L
Sbjct: 78 PPEEVGFLMKLFLKSLKGEVSRLAENDISLRLIGDLSRFDSAIQEMVQFSEQKTAECKAL 137
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
IA NY R +I +A++ + + D+ L+ +L + P+PDL IRTGG
Sbjct: 138 TFTIAANYGGRWDILQAMRRCL--AANPDMKPEDISEELLQPHLSMAYAPEPDLFIRTGG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FLLWQ+AY+E F WPDF+ A + ++ R+RRFG S +
Sbjct: 196 EQRVSNFLLWQLAYTELYFTDVLWPDFNEAELHKAFDWFSQRERRFGRTSAQ 247
>gi|50955077|ref|YP_062365.1| undecaprenyl pyrophosphate synthetase [Leifsonia xyli subsp. xyli
str. CTCB07]
gi|50951559|gb|AAT89260.1| undecaprenyl pyrophosphate synthetase [Leifsonia xyli subsp. xyli
str. CTCB07]
Length = 268
Score = 185 bits (469), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 90/228 (39%), Positives = 136/228 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ I+MDGNGRWA +GL R GHR G ++VA A +VG+K+L+++AFS NW+R
Sbjct: 33 PEHVAIVMDGNGRWANRQGLTRIEGHRAGEASLLDVVAGAIQVGVKHLSVYAFSTENWKR 92
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + L + L + ++VR G + L ++ L+ AE T N L
Sbjct: 93 SPDEVRFLMGFNREVLHRRRDQLNEWGVRVRWAGRKPRLWSSVIKELQYAEQLTAGNDVL 152
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R EI+ A+++I +++ +G + V I ++L D PD DL +R+ G
Sbjct: 153 TLTMCVNYGGRTEIADAVRSIAEEVAAGRLKPSAVGEKTIQRHLYLPDTPDVDLFVRSSG 212
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S+FLLWQ AY+E VF+ WPDFSR + A+ + R+RRFGG
Sbjct: 213 EQRTSNFLLWQSAYAEMVFLDRLWPDFSRTDLWEAIELFARRNRRFGG 260
>gi|254428041|ref|ZP_05041748.1| undecaprenyl diphosphate synthase [Alcanivorax sp. DG881]
gi|196194210|gb|EDX89169.1| undecaprenyl diphosphate synthase [Alcanivorax sp. DG881]
Length = 260
Score = 185 bits (469), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 94/229 (41%), Positives = 135/229 (58%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P H+ IIMDGN RWA +GLP GHR G I+ AA GI+ LT+FAFS NW
Sbjct: 19 SVPRHVAIIMDGNNRWARKQGLPGEEGHRAGEATVQAIIRQAAHQGIEALTLFAFSSENW 78
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RRP +E+ L+ L L L + +++R IG+R + D+ + EAE T N
Sbjct: 79 RRPQAEVDHLMALFLKALGGRVEELHGHGVRIRFIGDRSAFAADLQDGMAEAESLTGANN 138
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+ + IA NY + +I+ A + + + + +G + + + +A +L +D+P PDL+IRT
Sbjct: 139 RMTVVIAVNYGGQWDIAHAARIMAEKVAAGEIQPEQISAESMAPHLSMADLPPPDLLIRT 198
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
GG++R+S+FLLWQ+AYSE F P WPDF + F AL + R RRFG
Sbjct: 199 GGDQRISNFLLWQLAYSELYFSPLLWPDFDADAFDAALQDFAGRQRRFG 247
>gi|224825017|ref|ZP_03698123.1| undecaprenyl diphosphate synthase [Lutiella nitroferrum 2002]
gi|224602688|gb|EEG08865.1| undecaprenyl diphosphate synthase [Lutiella nitroferrum 2002]
Length = 227
Score = 184 bits (468), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 96/225 (42%), Positives = 135/225 (60%), Gaps = 6/225 (2%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA R LPR AGH+KG+ E+V+ E+G++ LT+FAFS NWRRP E+S
Sbjct: 1 MDGNGRWAKKRFLPRVAGHKKGLSAVREVVSGCQELGVEYLTLFAFSTENWRRPQDEVSF 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ L L+ L NNI ++VIG+R I+ ++ AE +T N GL L IA +
Sbjct: 61 LMDLFLGALENEVEKLHSNNICLKVIGDRSRFAPRIVERIEAAEARTAANGGLVLTIAAD 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R ++ +A+ + I G+ + +A L + P+PDL IRTGGE+R+S+F
Sbjct: 121 YGGRWDMLQAVNRL---IREGATA---ITEEALAGRLSMAYAPEPDLFIRTGGEQRISNF 174
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
LLWQ+AYSE F WPDF ++ A+ Y R+RRFG S++
Sbjct: 175 LLWQLAYSELYFTDLLWPDFDKQALEGAVQSYRCRERRFGRTSEQ 219
>gi|156935311|ref|YP_001439227.1| undecaprenyl pyrophosphate synthase [Cronobacter sakazakii ATCC
BAA-894]
gi|156533565|gb|ABU78391.1| hypothetical protein ESA_03168 [Cronobacter sakazakii ATCC BAA-894]
Length = 252
Score = 184 bits (468), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 93/231 (40%), Positives = 138/231 (59%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++AFS NW RP
Sbjct: 19 HVAIIMDGNGRWAKRQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPA 78
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+S L++L L SL ++N+++RVIG+ + + + +AE T NTGL L
Sbjct: 79 QEVSALMELFVWALDSEVKSLHRHNVRLRVIGDISRFNTRLQDRIHKAEALTSQNTGLTL 138
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA NY R +I + ++ + ++ G + +D +++K + ++ DL+IRTGGE
Sbjct: 139 NIAANYGGRWDIIQGVQQLAAQVQEGLLRPDQIDEEMLSKQICMHELAPVDLVIRTGGEH 198
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
R+S+FLLWQ+AY+E F WPDF + F ALN + R+RRFGG + G
Sbjct: 199 RISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGGTAPGG 249
>gi|23008280|ref|ZP_00049791.1| COG0020: Undecaprenyl pyrophosphate synthase [Magnetospirillum
magnetotacticum MS-1]
Length = 266
Score = 184 bits (468), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 90/228 (39%), Positives = 139/228 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ ++MDGNGRWA ARGLPR AGH G ++VA A E+G+K+++ +AFS NW+R
Sbjct: 26 PNHVAVVMDGNGRWANARGLPRTAGHEAGEAALLDVVAGAIEIGVKHVSAYAFSTENWKR 85
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ + ++VR G R L ++ L+ AE+QT+ N
Sbjct: 86 SPDEVRFLMGFNRDVIRRRRDEMDSWGVRVRWAGRRPRLWASVIKELEVAEEQTKQNDVC 145
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R EI+ A I +++ +G + V + ++LD D+PD DL +R+ G
Sbjct: 146 TLTMCVNYGGRAEIADAAAAIAREVAAGRIDPRKVTERTVQQHLDEPDLPDVDLFLRSSG 205
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S+F+LWQ AY+E VF+PE WPD R + A+ +Y RDRR+GG
Sbjct: 206 EQRTSNFMLWQAAYAELVFLPEPWPDVDRRSLWRAVEEYARRDRRYGG 253
>gi|170747236|ref|YP_001753496.1| undecaprenyl diphosphate synthase [Methylobacterium radiotolerans
JCM 2831]
gi|170653758|gb|ACB22813.1| undecaprenyl diphosphate synthase [Methylobacterium radiotolerans
JCM 2831]
Length = 240
Score = 184 bits (468), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 98/237 (41%), Positives = 139/237 (58%), Gaps = 8/237 (3%)
Query: 5 MMSSSPPD--HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
M S + P H IIMDGNGRWA RGLPR AGH +G+E A + GI LT++A
Sbjct: 1 MQSEAVPGALHAAIIMDGNGRWATQRGLPRLAGHHRGVEAIRRTAEACPDHGIGTLTLYA 60
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS +NW+RP E+ L++L++S+L+ L + ++ V+G R L D I + AE
Sbjct: 61 FSADNWQRPAEEVGGLMRLLRSYLRNETQRLARTGTRLSVVGRRDRLPDGIPQAIAAAEA 120
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T T L+L I +YS+RD I A + + +G + + L+A + S V D
Sbjct: 121 ATAGGTRLHLRICVDYSARDAIIAAAQGL-----AGEEPTRESFGKLVAGPMHGSPV-DV 174
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DL+IRTGGE+RLSDF+LW+ AY+E +F WPDF + A+ ++ R+RRFGGL
Sbjct: 175 DLLIRTGGERRLSDFMLWEAAYAELLFTERMWPDFGPDDLAEAVAEFGRRERRFGGL 231
>gi|194435427|ref|ZP_03067609.1| di-trans,poly-cis-decaprenylcistransferase [Shigella dysenteriae
1012]
gi|194416330|gb|EDX32517.1| di-trans,poly-cis-decaprenylcistransferase [Shigella dysenteriae
1012]
Length = 253
Score = 184 bits (468), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 89/226 (39%), Positives = 139/226 (61%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++AFS NW RP
Sbjct: 20 HVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPA 79
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+S L++L L SL ++N+++R+IG+ + + ++++E T NTGL L
Sbjct: 80 QEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTL 139
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA NY R +I + ++ + + ++ G++ +D ++ +++ ++ DL+IRTGGE
Sbjct: 140 NIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGEH 199
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R+S+FLLWQ+AY+E F WPDF + F ALN + R+RRFGG
Sbjct: 200 RISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGG 245
>gi|121604664|ref|YP_981993.1| undecaprenyl diphosphate synthase [Polaromonas naphthalenivorans
CJ2]
gi|120593633|gb|ABM37072.1| Undecaprenyl pyrophosphate synthetase [Polaromonas
naphthalenivorans CJ2]
Length = 240
Score = 184 bits (468), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 131/227 (57%), Gaps = 7/227 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I+MDGNGRWA R LPR AGH++G++ + V A GI LT+FAFS NW R
Sbjct: 9 PHHVAIVMDGNGRWAKKRYLPRIAGHKQGVDALSRCVKACLARGIGVLTVFAFSSENWSR 68
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L+ L K SL N +++ IG+R + + L +AE T N L
Sbjct: 69 PSEEVSGLMDLVVLALAKKVQSLNANGVQIHFIGDRQRFSERVRSALVQAESSTANNQRL 128
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ FNY R +I++A + + E+ + S D + + S VPDPDL+IRTGG
Sbjct: 129 VFNVCFNYGGRWDIAQAAQKLASRGEAITELSLD-------RAMAMSHVPDPDLLIRTGG 181
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+FLLWQ+AYSE F + WP+F A+ + R+RRFG
Sbjct: 182 ELRISNFLLWQLAYSELYFSDKLWPEFDEAALDTAIAAFAARERRFG 228
>gi|120603156|ref|YP_967556.1| undecaprenyl diphosphate synthase [Desulfovibrio vulgaris DP4]
gi|120563385|gb|ABM29129.1| Undecaprenyl pyrophosphate synthetase [Desulfovibrio vulgaris DP4]
Length = 247
Score = 184 bits (468), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 97/234 (41%), Positives = 133/234 (56%), Gaps = 4/234 (1%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S+ +++ P H+ IIMDGNGRWA RGL R GH+ G E IV A VGI++LT++ F
Sbjct: 10 SVSAAALPAHVAIIMDGNGRWATMRGLSRSEGHKAGTEAARAIVTEARTVGIRHLTMYTF 69
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP SE+ L +L+ FL + +L++ I++ V G L L+ A +
Sbjct: 70 SRENWNRPKSEVKFLFELLVDFLGRELANLERQGIRLNVFGALEDLPMATRMALQHAIGR 129
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T + L +A NYS R+EI RA +++ + V D+ A L T+ PDPD
Sbjct: 130 TAHCDAMMLNLALNYSGREEILRACRSLVTE----GVAPADITEEAFAARLYTAGQPDPD 185
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
L+IRT GE R+S++LL+Q AYSEF F WPDF+ AL Y R RRFG
Sbjct: 186 LVIRTSGEIRISNYLLFQSAYSEFYFTDTLWPDFTPAELHKALETYAGRSRRFG 239
>gi|320540037|ref|ZP_08039693.1| undecaprenyl pyrophosphate synthase [Serratia symbiotica str.
Tucson]
gi|320029886|gb|EFW11909.1| undecaprenyl pyrophosphate synthase [Serratia symbiotica str.
Tucson]
Length = 259
Score = 184 bits (468), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 144/245 (58%), Gaps = 9/245 (3%)
Query: 5 MMSSSPPD---------HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGI 55
M+S++P + H+ IIMDGNGRWA +G R GH+ G++ V+ AA +
Sbjct: 1 MVSANPQEANPFHLGARHVAIIMDGNGRWAKRQGKLRVFGHKAGVKSVRRAVSFAASNRL 60
Query: 56 KNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILC 115
+ LT++AFS NW R + E+S L++L L SL K+N+++RVIG+ +
Sbjct: 61 EALTLYAFSSENWNRSIQEVSALMELFVHALDSELKSLHKHNVRLRVIGDISRFSKRLQG 120
Query: 116 VLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD 175
+ +E T+ N GL L IA NY R +I + +K + + ++ G + S + L+++ +
Sbjct: 121 RIHRSEQLTKNNNGLTLNIAANYGGRWDIIQGVKKLAEQVQGGMLRSDQISEELLSQCVC 180
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
SD+ DL+IRTGGE R+S+FLLWQ+AY+E F WPDF +F ALN + R+RR
Sbjct: 181 MSDLAPVDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEHVFEDALNAFAQRERR 240
Query: 236 FGGLS 240
FGG +
Sbjct: 241 FGGTT 245
>gi|163853461|ref|YP_001641504.1| undecaprenyl diphosphate synthase [Methylobacterium extorquens PA1]
gi|163665066|gb|ABY32433.1| undecaprenyl diphosphate synthase [Methylobacterium extorquens PA1]
Length = 236
Score = 184 bits (468), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 97/227 (42%), Positives = 131/227 (57%), Gaps = 11/227 (4%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H IIMDGNGRWA+ARGLPR AGHR G++ + AA +GI LT++AFS +NWRR
Sbjct: 12 HAAIIMDGNGRWASARGLPRGAGHRAGVKTIQRVAEAAPALGIGTLTLYAFSSDNWRRSA 71
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+ L++L++++L+ L ++ ++ VIG R L I ++ AE T L+L
Sbjct: 72 EEVGGLMRLLRAYLRGETDRLARSGTRLTVIGRRDRLPPGIPEAIERAEAATASGDRLHL 131
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA +YSSRD I A + + + + +L A D DL+IRTGGEK
Sbjct: 132 RIAVDYSSRDAILAAAARLGPE----GLSREGLSKALGADG-------DVDLLIRTGGEK 180
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLSDFLLW+ AY+E F WPDF A+ + RDRRFGGL
Sbjct: 181 RLSDFLLWEAAYAELHFTDRMWPDFGATDLAAAVADFTARDRRFGGL 227
>gi|46579282|ref|YP_010090.1| undecaprenyl diphosphate synthase [Desulfovibrio vulgaris str.
Hildenborough]
gi|46448696|gb|AAS95349.1| undecaprenyl diphosphate synthase [Desulfovibrio vulgaris str.
Hildenborough]
gi|311233110|gb|ADP85964.1| undecaprenyl diphosphate synthase [Desulfovibrio vulgaris RCH1]
Length = 247
Score = 184 bits (468), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 97/234 (41%), Positives = 133/234 (56%), Gaps = 4/234 (1%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S+ +++ P H+ IIMDGNGRWA RGL R GH+ G E IV A VGI++LT++ F
Sbjct: 10 SVSAAALPAHVAIIMDGNGRWATMRGLSRSEGHKAGTEAARAIVTEARTVGIRHLTMYTF 69
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP SE+ L +L+ FL + +L++ I++ V G L L+ A +
Sbjct: 70 SRENWSRPKSEVKFLFELLVDFLGRELANLERQGIRLNVFGALEDLPMATRMALQHAIGR 129
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T + L +A NYS R+EI RA +++ + V D+ A L T+ PDPD
Sbjct: 130 TAHCDAMMLNLALNYSGREEILRACRSLVTE----GVAPADITEEAFAARLYTAGQPDPD 185
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
L+IRT GE R+S++LL+Q AYSEF F WPDF+ AL Y R RRFG
Sbjct: 186 LVIRTSGEIRISNYLLFQSAYSEFYFTDTLWPDFTPAELHKALETYAGRSRRFG 239
>gi|38234283|ref|NP_940050.1| putative undecaprenyl phosphate synthetase [Corynebacterium
diphtheriae NCTC 13129]
gi|42559926|sp|P60481|UPPS2_CORDI RecName: Full=Undecaprenyl pyrophosphate synthase 2; Short=UPP
synthase 2; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase 2;
AltName: Full=Undecaprenyl diphosphate synthase 2;
Short=UDS 2
gi|38200546|emb|CAE50241.1| Putative undecaprenyl phosphate synthetase [Corynebacterium
diphtheriae]
Length = 245
Score = 184 bits (468), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 91/228 (39%), Positives = 135/228 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI ++MDGNGRWA RGL R GH++G V ++V A +GI L+ +AFS NWRR
Sbjct: 16 PRHIALVMDGNGRWATNRGLKRTEGHKRGEAVLLDMVDACIAMGIPYLSAYAFSTENWRR 75
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + L++ +L ++VR +G R L ++ L+ AE+ T+ NT +
Sbjct: 76 STDEVRFLMGFNRDVLRRQRDALNAKGVRVRWVGRRPRLWRSVIRELEAAEELTKDNTTM 135
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R EI A + I + G++ ++ ++LD D+PD DL +R G
Sbjct: 136 TLAMCVNYGGRAEIVDAAREIARRSAVGTLRPEEITEDSFTQFLDEPDMPDVDLFLRPSG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
EKR S+FLLWQ AY+E V+ + +PD++ E F A+ +Y LRDRRFGG
Sbjct: 196 EKRTSNFLLWQSAYAEMVYQNKLFPDYTPEDLFAAVEEYALRDRRFGG 243
>gi|307329118|ref|ZP_07608285.1| undecaprenyl diphosphate synthase [Streptomyces violaceusniger Tu
4113]
gi|306885313|gb|EFN16332.1| undecaprenyl diphosphate synthase [Streptomyces violaceusniger Tu
4113]
Length = 278
Score = 184 bits (468), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 86/228 (37%), Positives = 132/228 (57%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +MDGNGRWA RGLPR GH+ G V +++ E+G+KNL+++AFS NW+R
Sbjct: 35 PTHVACVMDGNGRWAKERGLPRTEGHKVGEGVVLDVLKGCLEMGVKNLSLYAFSTENWKR 94
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ + +++R G L + L+ A++QT+ N +
Sbjct: 95 SPDEVRFLMNFNRDVIRRRRDEMDAMGVRIRWAGRMPKLWKSVAQELQVAQEQTKDNDAM 154
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
++ NY R EI+ A K + +D+ SG + V+ AKYL D+PD DL +R G
Sbjct: 155 TMYFCMNYGGRAEIADAAKALAEDVRSGRLDPSKVNEKTFAKYLYYPDMPDVDLFLRPSG 214
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S++L+WQ AY+E V+ WPDF R + A +Y RDRRFGG
Sbjct: 215 EQRTSNYLIWQSAYAEMVYQDVLWPDFDRRDLWRACLEYASRDRRFGG 262
>gi|319762179|ref|YP_004126116.1| undecaprenyl diphosphate synthase [Alicycliphilus denitrificans BC]
gi|330826009|ref|YP_004389312.1| undecaprenyl diphosphate synthase [Alicycliphilus denitrificans
K601]
gi|317116740|gb|ADU99228.1| undecaprenyl diphosphate synthase [Alicycliphilus denitrificans BC]
gi|329311381|gb|AEB85796.1| undecaprenyl diphosphate synthase [Alicycliphilus denitrificans
K601]
Length = 245
Score = 184 bits (468), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 95/241 (39%), Positives = 136/241 (56%), Gaps = 7/241 (2%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+++ ++ P HI I+MDGNGRWA R LPR AGHR+G+E V A G+ LT+F
Sbjct: 1 MSTTAQTAIPHHIAIVMDGNGRWATRRFLPRLAGHRQGVESLRRCVRACVARGVGVLTVF 60
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+S L+ L+ L + L ++ +++ +G + L D + L++AE
Sbjct: 61 AFSSENWNRPADEVSGLMDLLAKALAREVPQLSRDGVRLHFVGEKSGLSDKVRDGLRQAE 120
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T N L L + FNY R +I++A + E + S + + + VPD
Sbjct: 121 AATAGNDRLVLNVCFNYGGRWDIAQAAAQLAARGEP-------ITESSLHAAMGMAHVPD 173
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL+IRTGGEKR+S+FLLWQ AY+E F WPDF A+ Y R+RRFG S+
Sbjct: 174 PDLLIRTGGEKRISNFLLWQAAYTELYFSDRLWPDFDEAALDEAIADYAARERRFGRTSE 233
Query: 242 K 242
+
Sbjct: 234 Q 234
>gi|187735687|ref|YP_001877799.1| undecaprenyl diphosphate synthase [Akkermansia muciniphila ATCC
BAA-835]
gi|187425739|gb|ACD05018.1| undecaprenyl diphosphate synthase [Akkermansia muciniphila ATCC
BAA-835]
Length = 238
Score = 184 bits (468), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 93/229 (40%), Positives = 130/229 (56%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IMDGNGRWA +R LPR AGHR G + I LT++AFS NW R
Sbjct: 10 PTHIACIMDGNGRWANSRHLPRQAGHRAGADTVERCADFCMAHDIPWLTLYAFSSENWNR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L+ L+ FLKK + + +++ IG+ + +L+ + + T NT L
Sbjct: 70 PKTEVRALMLLLHEFLKKRLNQMMEKGVRLHAIGDLSRIPARTRKLLQNSLEATSGNTRL 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL +A +Y SR EI+ A + I + + G + V L +YLDT+ +P+PDL+IRT G
Sbjct: 130 NLVLAISYGSRGEIAAAARKIAEKVSRGELPPDAVTEDLFGEYLDTAGMPEPDLLIRTSG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+FLLWQ++Y+E WPDF AL Y+ R RRFG L
Sbjct: 190 EMRVSNFLLWQISYAEIHVTDTLWPDFCDRDMEAALLDYSRRKRRFGAL 238
>gi|305681226|ref|ZP_07404033.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
matruchotii ATCC 14266]
gi|305659431|gb|EFM48931.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
matruchotii ATCC 14266]
Length = 245
Score = 184 bits (467), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 91/228 (39%), Positives = 132/228 (57%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI ++MDGNGRWA RGL R GH++G V ++VAA + I L+ +AFS NWRR
Sbjct: 16 PRHIALVMDGNGRWAEQRGLKRTEGHKRGEAVLLDMVAACQALDIPYLSAYAFSTENWRR 75
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + L + L + +KVR +G R L +L L+ AE+ T+ NT +
Sbjct: 76 SADEVRFLMGFNRDVLTRQKMWLHERGVKVRWVGRRPRLWRSVLRELESAEELTKNNTSM 135
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
LF+ NY R EI ++ I + + G + D+ +LD +PD DL +R G
Sbjct: 136 TLFMCVNYGGRAEIIDGVREIVRKAQRGEIRPDDITEKNFHTFLDEPTMPDVDLFLRPSG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
EKR S+FLLWQ AY+E V+ + +PD++ + F A+ +Y RDRRFGG
Sbjct: 196 EKRTSNFLLWQSAYAEMVYQNKLFPDYTPQDLFDAVEEYAKRDRRFGG 243
>gi|328950710|ref|YP_004368045.1| Undecaprenyl pyrophosphate synthase [Marinithermus hydrothermalis
DSM 14884]
gi|328451034|gb|AEB11935.1| Undecaprenyl pyrophosphate synthase [Marinithermus hydrothermalis
DSM 14884]
Length = 228
Score = 184 bits (467), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 98/234 (41%), Positives = 136/234 (58%), Gaps = 7/234 (2%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P H+ IIMDGNGRWA ARGLPR GH G E V AA + ++ LT++AFS NW
Sbjct: 2 SVPRHVAIIMDGNGRWAQARGLPRFRGHLAGREAIRAAVRAAVKHQVEWLTLYAFSTENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RRP E+ L +L ++ L + +L + +++ +IG R L +L ++ AE+ +R T
Sbjct: 62 RRPQEEVDALFELFETVLWEETPNLVREGVRIHIIGEREGLPPTLLEAIRYAEEASREGT 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
L+L A NY R EI A++ + + + + + L ++PDPDLIIRT
Sbjct: 122 RLHLVGALNYGGRQEILSAVRRMVAE-------GLEPTEENLRRALYLPEMPDPDLIIRT 174
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE RLS+FLLWQ AYSE WPDFS E F A+ Y R+RRFGG+ ++
Sbjct: 175 SGELRLSNFLLWQSAYSEIWVTDTLWPDFSEEHFGQAVQAYQERERRFGGVPQR 228
>gi|323341771|ref|ZP_08082004.1| di-trans,poly-cis-decaprenylcistransferase [Erysipelothrix
rhusiopathiae ATCC 19414]
gi|322464196|gb|EFY09389.1| di-trans,poly-cis-decaprenylcistransferase [Erysipelothrix
rhusiopathiae ATCC 19414]
Length = 226
Score = 184 bits (467), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 96/228 (42%), Positives = 138/228 (60%), Gaps = 8/228 (3%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA + R GH G E +I A ++G++ +T++AFS NW+RP
Sbjct: 6 HVAIIMDGNGRWATKQKKERTFGHYYGSENVRDIALEALDLGVEVITLYAFSTENWKRPQ 65
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
EI L+KL F +K L + I++R IG+ + V+ A ++T+ N L L
Sbjct: 66 KEIDYLMKLPAVFFEKFLNELMEKGIQIRTIGDLTKIPARTRKVMDNAVERTKDNNKLIL 125
Query: 133 FIAFNYSSRDEISRAIKNIFQD-IESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
A NY SRDEI RA ++I D IE+ V ++ YLDT +P DL+IRTGG+
Sbjct: 126 NFALNYGSRDEIVRAAQSIVDDGIET-------VTETVFESYLDTFGLPPVDLLIRTGGD 178
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+RLS++LLWQ+AY+E +F+ WP+F R +F + +N R+RRFGGL
Sbjct: 179 RRLSNYLLWQLAYAELLFVDVQWPEFDRPMFKSCVEDFNQRNRRFGGL 226
>gi|86739980|ref|YP_480380.1| undecaprenyl pyrophosphate synthetase [Frankia sp. CcI3]
gi|86566842|gb|ABD10651.1| Undecaprenyl pyrophosphate synthetase [Frankia sp. CcI3]
Length = 265
Score = 184 bits (467), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 94/228 (41%), Positives = 136/228 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+GI+MDGNGRWA RGL R GH G + + V A E+G++ L++FAFS NW+R
Sbjct: 32 PRHVGIVMDGNGRWAKMRGLARTKGHEAGEDALFDCVEGAIELGVRWLSVFAFSTENWKR 91
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E++ L++ + + ++VR G R L +++ L+ +E++TR N L
Sbjct: 92 SPDEVAFLMRFTDGVFGRRIEDMHALGVRVRWAGRRPRLWGNVIRRLESSEERTRDNDRL 151
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R EI+ A I +D+ G + +D + I +YLD D+PD DL+IRT G
Sbjct: 152 TLVMCVNYGGRAEIADAAAAIARDVREGRLRVDRIDEATIGRYLDEPDMPDLDLVIRTSG 211
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+RLS+FLLWQ AY+EF F+ WPDF R + A + RDRR+GG
Sbjct: 212 EQRLSNFLLWQAAYAEFSFVETLWPDFDRRDLWSACEDFARRDRRYGG 259
>gi|288937044|ref|YP_003441103.1| undecaprenyl diphosphate synthase [Klebsiella variicola At-22]
gi|288891753|gb|ADC60071.1| undecaprenyl diphosphate synthase [Klebsiella variicola At-22]
Length = 252
Score = 184 bits (467), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 89/231 (38%), Positives = 142/231 (61%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++AFS NW RP
Sbjct: 19 HVAIIMDGNGRWAKRQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPA 78
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+S L++L L SL ++N+++RVIG+ + + +++AE T NTGL L
Sbjct: 79 QEVSALMELFVWALDSEVKSLHRHNVRLRVIGDTTRFNARLQERIRKAEALTANNTGLTL 138
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA NY R +I++ ++ + + ++ G++ ++ ++++ + ++ DL+IRTGGE
Sbjct: 139 NIAANYGGRWDITQGVRLLAKQVQDGTLLPEEITEEMLSQQVCMHELAPVDLVIRTGGEH 198
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
R+S+FL+WQ+AY+E F WPDF+ + F AL+ + R+RRFGG G
Sbjct: 199 RISNFLIWQIAYAELYFTDVLWPDFAEQDFEGALHAFVNRERRFGGTEPGG 249
>gi|229820259|ref|YP_002881785.1| undecaprenyl diphosphate synthase [Beutenbergia cavernae DSM 12333]
gi|229566172|gb|ACQ80023.1| undecaprenyl diphosphate synthase [Beutenbergia cavernae DSM 12333]
Length = 228
Score = 184 bits (467), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 90/221 (40%), Positives = 133/221 (60%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA ARGLPR GH G V ++VA A E+GI +++ +AFS NW+R +E+
Sbjct: 1 MDGNGRWANARGLPRTEGHAAGEAVLLDVVAGAIELGITHVSAYAFSTENWKRSPAEVRW 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ + L++ + ++VR G R L ++ L+EAE TR N L + N
Sbjct: 61 LMGFNRDVLRRRRDEMSSWGVRVRWAGRRPRLWRSVIAELEEAERVTRDNALCTLTMCVN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R EI+ A + I +++ +G + + +A++LD D+PD DL +RTGGE+R S+F
Sbjct: 121 YGGRAEIADATRAIAREVAAGRLDPERITERTLARHLDEPDMPDVDLFLRTGGEQRASNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L+WQ AY+E VF+ + WPD R + A +Y RDRR+GG
Sbjct: 181 LIWQSAYAEMVFLDKPWPDVDRRDLWAAALEYARRDRRYGG 221
>gi|206579804|ref|YP_002240338.1| di-trans,poly-cis-decaprenylcistransferase [Klebsiella pneumoniae
342]
gi|290512465|ref|ZP_06551831.1| di-trans,poly-cis-decaprenylcistransferase [Klebsiella sp. 1_1_55]
gi|206568862|gb|ACI10638.1| di-trans,poly-cis-decaprenylcistransferase [Klebsiella pneumoniae
342]
gi|289774806|gb|EFD82808.1| di-trans,poly-cis-decaprenylcistransferase [Klebsiella sp. 1_1_55]
Length = 258
Score = 184 bits (467), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 89/231 (38%), Positives = 142/231 (61%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++AFS NW RP
Sbjct: 25 HVAIIMDGNGRWAKRQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPA 84
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+S L++L L SL ++N+++RVIG+ + + +++AE T NTGL L
Sbjct: 85 QEVSALMELFVWALDSEVKSLHRHNVRLRVIGDTTRFNARLQERIRKAEALTANNTGLTL 144
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA NY R +I++ ++ + + ++ G++ ++ ++++ + ++ DL+IRTGGE
Sbjct: 145 NIAANYGGRWDITQGVRLLAKQVQDGTLLPEEITEEMLSQQVCMHELAPVDLVIRTGGEH 204
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
R+S+FL+WQ+AY+E F WPDF+ + F AL+ + R+RRFGG G
Sbjct: 205 RISNFLIWQIAYAELYFTDVLWPDFAEQDFEGALHAFVNRERRFGGTEPGG 255
>gi|299137314|ref|ZP_07030496.1| undecaprenyl diphosphate synthase [Acidobacterium sp. MP5ACTX8]
gi|298600719|gb|EFI56875.1| undecaprenyl diphosphate synthase [Acidobacterium sp. MP5ACTX8]
Length = 264
Score = 184 bits (467), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 143/229 (62%), Gaps = 1/229 (0%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA RGLPR AGHR G +V A ++GI+ LT++AFS +NWRRPV
Sbjct: 23 HVAIIMDGNGRWATQRGLPRIAGHRAGGAAARRVVEHAMDMGIRCLTLYAFSSDNWRRPV 82
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+ + L+++FL+ +K ++++ IG R L +L + +AED T T L+L
Sbjct: 83 LEVHRIFWLLRAFLRLERERFRKRGVRLQAIGRRDRLPKVLLREINDAEDATAGGTRLHL 142
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A +YSSRD+I+RA + S S ++ ++A+ L + D DL+IRTGGEK
Sbjct: 143 RVALDYSSRDDITRAAMRASSKVCDSSELSAEMLGQMLAEELKAGN-GDVDLLIRTGGEK 201
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
RLSDFLLW+ AY+E +F WPDF AL ++ R+RRFGG+ +
Sbjct: 202 RLSDFLLWESAYAELLFTDRMWPDFDAADLEAALEEFRHRERRFGGVPE 250
>gi|239908425|ref|YP_002955167.1| undecaprenyl pyrophosphate synthetase [Desulfovibrio magneticus
RS-1]
gi|239798292|dbj|BAH77281.1| undecaprenyl pyrophosphate synthetase [Desulfovibrio magneticus
RS-1]
Length = 232
Score = 184 bits (467), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 99/227 (43%), Positives = 125/227 (55%), Gaps = 4/227 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA RGLPR GHR G+E IV E+GI++LT++ FS NW R
Sbjct: 2 PRHVAVIMDGNGRWATMRGLPRSEGHRAGVESARGIVTRCRELGIEHLTLYTFSKENWGR 61
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EI L L+ FL K +L +I+ +V+G L VL +T +
Sbjct: 62 PADEIKFLFDLLVRFLTKELDTLLAQSIRFKVLGELDELPLAARTVLSRVIAKTAHCEAM 121
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NYS R+EI RA + + + + S V +A L T+ PDPDLIIRT G
Sbjct: 122 TLNLALNYSGREEILRACRR----LAAKGLASEAVTEEALAAELYTAGQPDPDLIIRTSG 177
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E RLS +LLWQ AYSEF F WPDF+ L Y R RRFG
Sbjct: 178 EMRLSGYLLWQSAYSEFAFPETLWPDFTPACLDAILADYCNRTRRFG 224
>gi|297626095|ref|YP_003687858.1| Undecaprenyl diphosphate synthase
(di-trans,poly-cis-decaprenylcistransferase)
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
gi|296921860|emb|CBL56420.1| Undecaprenyl diphosphate synthase
(di-trans,poly-cis-decaprenylcistransferase)
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
Length = 266
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 90/228 (39%), Positives = 133/228 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ ++MDGNGRWA RGLPR GH G +++A A E+GI L+++AFS NW+R
Sbjct: 31 PRHVAVVMDGNGRWATQRGLPRTKGHEAGESALFDVIAGAIEMGIDCLSVYAFSTENWKR 90
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ +S + + L ++VR G R L ++ L++AE++TR N L
Sbjct: 91 SPEEVRFLMGFSRSVIHRRLDELDAWGVRVRWAGRRPRLWRSVITELEQAEERTRHNDTL 150
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ NY R EI A + I +G + + +YLD D+PD DL +R+ G
Sbjct: 151 QMQFCVNYGGRAEIVDAARKIAAAAAAGRLDPAHLTEKSFHRYLDEPDMPDVDLFVRSSG 210
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+RLS+FL+WQ AY+E VF + WPD+ R + A+N+Y RDRR+GG
Sbjct: 211 EQRLSNFLIWQSAYAELVFSQKLWPDWDRRDLWDAVNRYVHRDRRYGG 258
>gi|333029737|ref|ZP_08457798.1| Undecaprenyl pyrophosphate synthase [Bacteroides coprosuis DSM
18011]
gi|332740334|gb|EGJ70816.1| Undecaprenyl pyrophosphate synthase [Bacteroides coprosuis DSM
18011]
Length = 245
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 136/232 (58%), Gaps = 2/232 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R R GH+ G + +I +A +G+K LT++ FS NW R
Sbjct: 13 PKHIAIIMDGNGRWAKQRNKNRSYGHQAGADAVYKIAEESARLGVKYLTLYTFSSENWNR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L+ L + K++I ++IG + L D+ L + ++T+ N G+
Sbjct: 73 PSDEVTALMSLLMESLDDSLFM--KHDICFKIIGEQDKLPHDVQMRLNQCANKTKGNKGM 130
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +YSS E++ A K I ++ + ++ I + L T +P+PDL+IRTGG
Sbjct: 131 CLVLALSYSSHWELTEATKKIATLVKENKLDIEEITPDTIQQNLATQFMPNPDLLIRTGG 190
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E RLS++LLWQ AY+EF F YWPDF + A+ + R+RRFG S++
Sbjct: 191 EYRLSNYLLWQCAYTEFYFCDTYWPDFKEDNLKEAIMDFQQRERRFGKTSEQ 242
>gi|189404567|ref|ZP_02790300.2| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC4501]
gi|189364913|gb|EDU83329.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC4501]
Length = 281
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/226 (39%), Positives = 139/226 (61%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++AFS NW RP
Sbjct: 48 HVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPA 107
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+S L++L L SL ++N+++R+IG+ + + ++++E T NTGL L
Sbjct: 108 QEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTL 167
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA NY R +I + ++ + + ++ G++ +D ++ +++ ++ DL+IRTGGE
Sbjct: 168 NIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGEH 227
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R+S+FLLWQ+AY+E F WPDF + F ALN + R+RRFGG
Sbjct: 228 RISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGG 273
>gi|298346621|ref|YP_003719308.1| undecaprenyl phosphate synthetase [Mobiluncus curtisii ATCC 43063]
gi|298236682|gb|ADI67814.1| undecaprenyl phosphate synthetase [Mobiluncus curtisii ATCC 43063]
Length = 227
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/221 (41%), Positives = 127/221 (57%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA A+GL R AGH G + +A A E G+K L+++AFS NW+R +E+
Sbjct: 1 MDGNGRWANAQGLNRTAGHEAGEYALMDTIAGAVEAGVKFLSVYAFSTENWKRSPAEVKF 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ + L+ L ++VR G L +L L+ AE TR NTG L + N
Sbjct: 61 LMGYSRRVLRDRRDELNAWGVRVRWSGREGRLWKSVLTELRRAETLTRGNTGTQLIMCLN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R E++ A + + Q + +G++ + + A+ L DVPD DL+IRT GE+R S+F
Sbjct: 121 YGGRAELADAARKLAQRVAAGTLNPERITEATFARELYLPDVPDVDLLIRTSGEQRTSNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L WQ AY+E VF PE WP++ R + L Y RDRRFGG
Sbjct: 181 LPWQAAYAELVFAPEPWPEYGRAALWRDLLAYQHRDRRFGG 221
>gi|117928004|ref|YP_872555.1| undecaprenyl pyrophosphate synthetase [Acidothermus cellulolyticus
11B]
gi|117648467|gb|ABK52569.1| Undecaprenyl pyrophosphate synthetase [Acidothermus cellulolyticus
11B]
Length = 269
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/228 (39%), Positives = 136/228 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I+MDGNGRWA ARGLPR AGH +G ++V A E+G+K L+ +AFS NW+R
Sbjct: 26 PRHVAIVMDGNGRWARARGLPRTAGHERGEAALLDVVEGAIEIGVKWLSAYAFSTENWKR 85
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ + + ++VR G R L ++ L+ AE+ T+ N L
Sbjct: 86 SPEEVRFLMGFNRDVIRRRRDYMNELGVRVRWAGRRPRLWRSVIRELERAEEMTKHNDVL 145
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R EI+ A + + D+ +G + V + A+YLD D+PD DL IR+ G
Sbjct: 146 TLTMCVNYGGRAEIADAARALAADVAAGRLSPASVTERVFARYLDEPDMPDVDLFIRSSG 205
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S+FL+WQ AY+E VF+ WPDF R + A+ Y R+RR+G
Sbjct: 206 EQRTSNFLIWQSAYAELVFVDTLWPDFDRRDLWRAIEIYAQRERRYGA 253
>gi|224060409|ref|XP_002300185.1| predicted protein [Populus trichocarpa]
gi|222847443|gb|EEE84990.1| predicted protein [Populus trichocarpa]
Length = 241
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 135/232 (58%), Gaps = 2/232 (0%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P H+ +IMDGN RWA RG+ +GH G+ E + + GIK +T+FAFSI+NW
Sbjct: 9 SMPRHVAVIMDGNSRWARQRGMLTPSGHEAGVRSLKEFIRLCLQWGIKVVTVFAFSIDNW 68
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+ ++ +I++ LK G + +V +IG+ + + + + E+ TR N+
Sbjct: 69 TRPKEEVDIVMTMIENLLKSGLDDFIREGTRVSIIGDTSRVPKSLQRTICDIEEMTRENS 128
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT--SDVPDPDLII 186
+ +A +YS ++ +A K++ Q ++ G + D++ S + + L+T + P PDL+I
Sbjct: 129 KFHFIMAISYSGTYDVVQACKSVAQKVKDGVIQVEDINESAVQQELETKCCEFPCPDLLI 188
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
RT GE R+S+FLLWQ AYSE F WPDF + F AL Y R RR+GG
Sbjct: 189 RTSGELRISNFLLWQSAYSELFFAKALWPDFGKADFVEALTSYQHRQRRYGG 240
>gi|119716164|ref|YP_923129.1| undecaprenyl pyrophosphate synthetase [Nocardioides sp. JS614]
gi|119536825|gb|ABL81442.1| Undecaprenyl pyrophosphate synthetase [Nocardioides sp. JS614]
Length = 271
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 87/230 (37%), Positives = 134/230 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I+MDGNGRWA RGLPR GH +G ++V A E+G+K ++ +AFS NW R
Sbjct: 22 PRHVAIVMDGNGRWAKERGLPRTKGHERGEHSLFDVVEGAIEIGVKAISAYAFSTENWSR 81
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ + + ++VR G L ++ L+ AE+ TR N L
Sbjct: 82 SPDEVRFLMGFNRDVIRRRRDEMHELGVRVRWAGRAPRLWKSVIRELQVAEELTRRNDVL 141
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R E++ ++I +++ +G + VD + A++L ++ D DL+ RT G
Sbjct: 142 TLTMCVNYGGRAELADTARSIAREVAAGRLDPEKVDEKVFARHLYVPELADADLVWRTSG 201
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E+RLS+F+LWQ AYSE VF WPD R +HA+ Y RDRR+GG +
Sbjct: 202 EQRLSNFMLWQAAYSELVFTDVLWPDVDRRHLWHAIELYASRDRRYGGAA 251
>gi|304396649|ref|ZP_07378530.1| undecaprenyl diphosphate synthase [Pantoea sp. aB]
gi|304356158|gb|EFM20524.1| undecaprenyl diphosphate synthase [Pantoea sp. aB]
Length = 250
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 136/233 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R +GH+ G++ V+ A ++ LT++AFS NW R
Sbjct: 17 PRHVAIIMDGNGRWAKNQGKLRISGHKAGVKSVRRAVSFAVNNNLEALTLYAFSSENWSR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L++L L SL K+N+++RVIG+ I ++ +E T NT L
Sbjct: 77 PAQEVTALMELFVWALDSEVKSLHKHNVRLRVIGDTSRFSPRIQERIRRSETLTANNTRL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I +K + + ++ G + + + L ++ DL+IRTGG
Sbjct: 137 TLNIAANYGGRWDIIEGVKKLAEQVQEGLLRPDQITEESLTSQLCMQELAPVDLVIRTGG 196
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
E R+S+FLLWQ+AY+EF F WPDF +F ALN ++LR+RRFGG + G
Sbjct: 197 EHRISNFLLWQIAYAEFYFTDVLWPDFDEHVFEGALNAFSLRERRFGGAAPGG 249
>gi|33865468|ref|NP_897027.1| undecaprenyl pyrophosphate synthase [Synechococcus sp. WH 8102]
gi|42559946|sp|Q7U7P7|UPPS_SYNPX RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|33632637|emb|CAE07449.1| Undecaprenyl pyrophosphate synthetase (UPPS) [Synechococcus sp. WH
8102]
Length = 260
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/229 (39%), Positives = 139/229 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA ARGLPR GHR G+E + ++ GI LT +AFS NW R
Sbjct: 27 PVHVAVIMDGNGRWAEARGLPRMMGHRAGVEALKSTLRLCSDWGIAALTAYAFSTENWSR 86
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L + L+K +L++ +++R +G+ +L + ++ +A ++T N G+
Sbjct: 87 PGDEVNFLMTLFERVLQKELRTLEEEQVRIRFLGDLDALPLKLQELIGDATERTAANDGI 146
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ + NY R E+ RA + + + +G + D+D + +A L T+ DPDL+IRT G
Sbjct: 147 HFNVCTNYGGRRELVRAAQRLARQAANGDLMPEDIDENSLAAELFTAGEQDPDLLIRTSG 206
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+FLLWQ+AY+E +WPDF+ E AL + R RRFGGL
Sbjct: 207 EHRISNFLLWQLAYAEIHVTDVFWPDFNAEALKRALLDFQSRSRRFGGL 255
>gi|260596594|ref|YP_003209165.1| undecaprenyl pyrophosphate synthase [Cronobacter turicensis z3032]
gi|260215771|emb|CBA28187.1| Undecaprenyl pyrophosphate synthetase [Cronobacter turicensis
z3032]
Length = 252
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/231 (39%), Positives = 140/231 (60%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++AFS NW RP
Sbjct: 19 HVAIIMDGNGRWAKRQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPA 78
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+S L++L L SL ++N+++RVIG+ + + + +AE T N+GL L
Sbjct: 79 QEVSALMELFVWALDSEVKSLHRHNVRLRVIGDISRFNTRLQDRIHKAEALTSQNSGLTL 138
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA NY R +I + ++++ ++ G + +D +++K + +++ DL+IRTGGE
Sbjct: 139 NIAANYGGRWDIIQGVQHLAAQVQEGLLRPDQIDEEMLSKQICMNELAPVDLVIRTGGEH 198
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
R+S+FLLWQ+AY+E F WPDF + F ALN + R+RRFGG + G
Sbjct: 199 RISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGGTAPGG 249
>gi|270264815|ref|ZP_06193079.1| undecaprenyl pyrophosphate synthetase [Serratia odorifera 4Rx13]
gi|270041113|gb|EFA14213.1| undecaprenyl pyrophosphate synthetase [Serratia odorifera 4Rx13]
Length = 252
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 137/233 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R GH+ G++ V+ AA + LT++AFS NW R
Sbjct: 16 PRHVAIIMDGNGRWAKRQGKLRVFGHKAGVKSVRRAVSFAANNHLDALTLYAFSSENWNR 75
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
PV E+S L++L L SL K+N+++RVIG+ + ++ +E T N GL
Sbjct: 76 PVQEVSALMELFVRALDSEVKSLHKHNVRLRVIGDISRFSTRLQERIRRSEQLTENNDGL 135
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I + ++ + + ++ G + + L+ + + +D+ DL+IRTGG
Sbjct: 136 TLNIAANYGGRWDIIQGVRELAEQVQGGLLRPDQISEELLGERVCMNDLAPVDLVIRTGG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
E R+S+FLLWQ+AY+E F WPDF +F ALN + R+RRFGG + G
Sbjct: 196 EHRISNFLLWQIAYAELYFTDVLWPDFDELVFEGALNAFAQRERRFGGTTPNG 248
>gi|262193810|ref|YP_003265019.1| undecaprenyl diphosphate synthase [Haliangium ochraceum DSM 14365]
gi|262077157|gb|ACY13126.1| undecaprenyl diphosphate synthase [Haliangium ochraceum DSM 14365]
Length = 294
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/227 (39%), Positives = 135/227 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA RGLPR GHR G + +IV AA ++ ++ LT++AFS NW R
Sbjct: 14 PRHIGIIMDGNGRWAQQRGLPRLEGHRVGADSVRDIVRAARQLDVEALTLYAFSAQNWAR 73
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L++ ++ + N+I++ IG+ + + L + N +
Sbjct: 74 PPEEVAGLMGLLRDYIVGERQEIMDNDIRLLAIGDIERMPSFVRDPLDALVADSANNRSM 133
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y R+ I RA K + + G + ++D +K L T ++P DL+IRT G
Sbjct: 134 RLVLALSYGGRESIVRAAKRAIEAVRGGRMNPDELDIDGFSKLLPTGELPPLDLLIRTSG 193
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+R+S+FLLW++AY+E +F WPDF R+ + AL Y R+RRFG
Sbjct: 194 EQRISNFLLWELAYAELIFTDVPWPDFRRQQLYDALASYAHRERRFG 240
>gi|254372208|ref|ZP_04987700.1| undecaprenyl pyrophosphate synthetase [Francisella tularensis
subsp. novicida GA99-3549]
gi|151569938|gb|EDN35592.1| undecaprenyl pyrophosphate synthetase [Francisella novicida
GA99-3549]
Length = 257
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 94/225 (41%), Positives = 137/225 (60%), Gaps = 1/225 (0%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA +R PR GHR + + + E I+ LT+FAF +NW RP
Sbjct: 28 HLAIIMDGNGRWAKSRLKPRIFGHRNSVSSVDATIEYCVENNIEMLTLFAFGRDNWLRPA 87
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+S+L+ L LK L NNI V V+G+R L D ++ +++ +E T+ NTGL L
Sbjct: 88 QEVSDLMDLFYKTLKDKTPRLHDNNIVVTVVGDRSRLSDKLIDMIEYSESLTKSNTGLKL 147
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A +Y+ R +I A + I ++++ G + ++D + AKYL ++P DL+IRT GE
Sbjct: 148 RLAVDYAGRWDIVEATRAIAREVDIGKLSVDEIDQNSFAKYLVGGNMP-VDLLIRTSGEV 206
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RLSDF+LWQ+AY+E F WPDFS++ A+ + R RRFG
Sbjct: 207 RLSDFMLWQLAYAEMYFTDIMWPDFSKQELTRAVEYFYSRQRRFG 251
>gi|156501612|ref|YP_001427677.1| undecaprenyl pyrophosphate synthase [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|290953219|ref|ZP_06557840.1| undecaprenyl pyrophosphate synthase [Francisella tularensis subsp.
holarctica URFT1]
gi|156252215|gb|ABU60721.1| undecaprenyl diphosphate synthase [Francisella tularensis subsp.
holarctica FTNF002-00]
Length = 240
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/230 (40%), Positives = 140/230 (60%), Gaps = 1/230 (0%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA +R PR GHR + + + E I+ LT+FAF +NW RP
Sbjct: 11 HLAIIMDGNGRWAKSRLKPRIFGHRNSVSSVDATIEYCVENNIEMLTLFAFGRDNWLRPA 70
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+S+L+ L LK L NNI V V+G+R L + ++ +++ +E T+ NTGL L
Sbjct: 71 QEVSDLMDLFYKTLKDKTPKLHDNNIVVTVVGDRSRLSNKLIGMIEYSESLTKSNTGLKL 130
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A +Y+ R +I A + I ++++ G + ++D + AKYL ++P DL+IRT GE
Sbjct: 131 RLAVDYAGRWDIVEATRAIAREVDIGKLSVDEIDQNSFAKYLVGGNMP-VDLLIRTSGEV 189
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RLSDF+LWQ+AY+E F WPDFS++ A+ + R RRFG + ++
Sbjct: 190 RLSDFMLWQLAYAEMYFTDIMWPDFSKQELTRAVEYFYSRQRRFGKIGEQ 239
>gi|254392568|ref|ZP_05007745.1| undecaprenyl pyrophosphate synthetase [Streptomyces clavuligerus
ATCC 27064]
gi|197706232|gb|EDY52044.1| undecaprenyl pyrophosphate synthetase [Streptomyces clavuligerus
ATCC 27064]
Length = 275
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 85/228 (37%), Positives = 134/228 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ +MDGNGRWA RGLPR GH++G V +++ E+G++NL+++AFS NW+R
Sbjct: 38 PNHVACVMDGNGRWAKERGLPRTEGHKRGEAVVLDVLKGCLELGVQNLSLYAFSTENWKR 97
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + ++ + + I++R +G L ++ L+ A++ T+ N +
Sbjct: 98 SPDEVRFLMGFNRDVIRARRDEMNEMGIRIRWVGRMPRLWKSVVQELQVAQEMTKDNDAM 157
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L+ NY R EI+ A + I QD+ +G + V+ KYL D+PD DL +R G
Sbjct: 158 TLYFCVNYGGRAEIADAAQKIAQDVAAGRLDPGKVNERTFQKYLYYPDMPDVDLFLRPSG 217
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S++L+WQ +Y+E VF WPDF R + A +Y RDRRFGG
Sbjct: 218 EQRTSNYLIWQSSYAEMVFQDVLWPDFDRRDLWRACLEYAKRDRRFGG 265
>gi|332701343|ref|ZP_08421431.1| Undecaprenyl pyrophosphate synthase [Desulfovibrio africanus str.
Walvis Bay]
gi|332551492|gb|EGJ48536.1| Undecaprenyl pyrophosphate synthase [Desulfovibrio africanus str.
Walvis Bay]
Length = 238
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/230 (40%), Positives = 134/230 (58%), Gaps = 5/230 (2%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P H+ +IMDGNGRWAA RG+ R GH G++ ++ +GI++LT++AFS NW
Sbjct: 2 SLPQHLALIMDGNGRWAAHRGMSRTEGHEAGVKTAQKVYRHCRNLGIRHLTLYAFSKENW 61
Query: 69 RRPVSEISELVKLI-KSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
+RP E+S L L+ + F +K L + +I+++V+G L VL+ ++T N
Sbjct: 62 QRPKDEVSFLFGLVTRYFTQKELRELMERDIRLQVLGELEDLPATTRKVLESYMEKTAGN 121
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+ + L +A NYS RDEI RA + + QD + ++ +A L T PDPD I+R
Sbjct: 122 SSMTLNLALNYSGRDEIVRAARLLLQD----GLRPEEITEEALASRLYTVGQPDPDFIVR 177
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
T GE RLS++LL+Q AYSE F +WPDF AL +Y R RRFG
Sbjct: 178 TSGEYRLSNYLLYQAAYSELYFTHTHWPDFDEAELDKALAEYAHRQRRFG 227
>gi|110834008|ref|YP_692867.1| undecaprenyl diphosphate synthase [Alcanivorax borkumensis SK2]
gi|110647119|emb|CAL16595.1| undecaprenyl diphosphate synthase [Alcanivorax borkumensis SK2]
Length = 260
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/227 (40%), Positives = 133/227 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGN RWA G+P GHR G I+ AA+ G++ LT+FAFS NWRR
Sbjct: 21 PRHVAIIMDGNNRWARKHGVPGEEGHRAGEATVQAIIRQAAQRGLEALTLFAFSSENWRR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L+ L L L + +++R IG+R + + + +AE T NT +
Sbjct: 81 PQAEVDHLMALFLKALAGRVEELHSHEVRIRFIGDRGAFSQGLQDGMTQAEVLTGNNTRM 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ IA NY + +I+ A + + + G + +D+ +A YL +D+P PDL+IRTGG
Sbjct: 141 TVVIAVNYGGQWDIAHAARQLAAKVAEGEMEVDQIDAGAMAPYLSMADLPPPDLLIRTGG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
++R+S+FLLWQ+AYSE F P WPDF + F AL Y R RRFG
Sbjct: 201 DQRISNFLLWQLAYSELFFSPLLWPDFDADAFDAALQDYAGRQRRFG 247
>gi|4218154|emb|CAA10743.1| hypothetical protein [Anabaena variabilis ATCC 29413]
Length = 251
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 137/231 (59%), Gaps = 1/231 (0%)
Query: 8 SSPPDHIGIIMDGNGR-WAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
++ P+ + +IMDGNGR +GLPR GH++G++ +++ + GI+ LT +AFS
Sbjct: 19 TTDPNTLTVIMDGNGRDGLNVQGLPRIMGHKRGVDALKDLLRCCRDWGIQALTAYAFSTE 78
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW+RP E+ L+ L + L++ + + N++++ +GN +L + + + + T+
Sbjct: 79 NWKRPQEEVEFLMTLFQRVLRQELREMVEENVQIQFVGNLAALPRSLQAEISRSMEATKN 138
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N G+ +A NY R EI +A + I Q ++ G + ++D + ++L T+ + DPDL+I
Sbjct: 139 NRGIRFSVATNYGGRQEILQACRAIAQKVQQGLLQPDEIDEEVFERHLYTAGIADPDLLI 198
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE RLS+FLLWQ+AY E WPDF R F AL Y R+RRFG
Sbjct: 199 RTSGEMRLSNFLLWQMAYGEIYITDTLWPDFDRTEFHRALCAYQQRERRFG 249
>gi|149193962|ref|ZP_01871060.1| putative undecaprenyl diphosphate synthase [Caminibacter
mediatlanticus TB-2]
gi|149135915|gb|EDM24393.1| putative undecaprenyl diphosphate synthase [Caminibacter
mediatlanticus TB-2]
Length = 220
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/230 (43%), Positives = 138/230 (60%), Gaps = 14/230 (6%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAA---EVGIKNLTIFAFSINNWR 69
HI IIMDGNGRWA RGL R GH+KG EV EI A E+ + LT++AFS NW+
Sbjct: 2 HIAIIMDGNGRWAKKRGLKRTEGHKKGAEVVKEITTYCANNPEIDV--LTLYAFSTENWK 59
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP EI L+KL+ ++LKK + +N ++ VIG+ D + ++ +++T+
Sbjct: 60 RPKMEIDFLMKLLDNWLKKELPTYIENEVRFEVIGDISKFSDKLKKRIELTKEKTKNFKK 119
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L +A NY SRDEI+RAIK + Q + ++ S I K LD S D DL+IRT
Sbjct: 120 LTQVLALNYGSRDEITRAIKKLIQK-------NEEITSENIQKNLDIS--RDVDLLIRTS 170
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE R+S+FLLWQ+AY+E F WPDF+ E + ++ R+RRFGG+
Sbjct: 171 GEVRVSNFLLWQIAYAEMFFTKTLWPDFTSEELDKIIKEFKKRERRFGGI 220
>gi|320173345|gb|EFW48548.1| Undecaprenyl pyrophosphate synthetase [Shigella dysenteriae CDC
74-1112]
Length = 253
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 88/226 (38%), Positives = 139/226 (61%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++AFS NW RP
Sbjct: 20 HVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPA 79
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+S L++L L SL ++N+++R+IG+ + + ++++E T NTGL L
Sbjct: 80 QEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQECIRKSEALTAGNTGLTL 139
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA +Y R +I + ++ + + ++ G++ +D ++ +++ ++ DL+IRTGGE
Sbjct: 140 NIAASYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGEH 199
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R+S+FLLWQ+AY+E F WPDF + F ALN + R+RRFGG
Sbjct: 200 RISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGG 245
>gi|326441011|ref|ZP_08215745.1| undecaprenyl pyrophosphate synthase [Streptomyces clavuligerus ATCC
27064]
Length = 267
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 85/228 (37%), Positives = 134/228 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ +MDGNGRWA RGLPR GH++G V +++ E+G++NL+++AFS NW+R
Sbjct: 30 PNHVACVMDGNGRWAKERGLPRTEGHKRGEAVVLDVLKGCLELGVQNLSLYAFSTENWKR 89
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + ++ + + I++R +G L ++ L+ A++ T+ N +
Sbjct: 90 SPDEVRFLMGFNRDVIRARRDEMNEMGIRIRWVGRMPRLWKSVVQELQVAQEMTKDNDAM 149
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L+ NY R EI+ A + I QD+ +G + V+ KYL D+PD DL +R G
Sbjct: 150 TLYFCVNYGGRAEIADAAQKIAQDVAAGRLDPGKVNERTFQKYLYYPDMPDVDLFLRPSG 209
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S++L+WQ +Y+E VF WPDF R + A +Y RDRRFGG
Sbjct: 210 EQRTSNYLIWQSSYAEMVFQDVLWPDFDRRDLWRACLEYAKRDRRFGG 257
>gi|294812536|ref|ZP_06771179.1| Undecaprenyl pyrophosphate synthetase 2 [Streptomyces clavuligerus
ATCC 27064]
gi|294325135|gb|EFG06778.1| Undecaprenyl pyrophosphate synthetase 2 [Streptomyces clavuligerus
ATCC 27064]
Length = 272
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 85/228 (37%), Positives = 134/228 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ +MDGNGRWA RGLPR GH++G V +++ E+G++NL+++AFS NW+R
Sbjct: 35 PNHVACVMDGNGRWAKERGLPRTEGHKRGEAVVLDVLKGCLELGVQNLSLYAFSTENWKR 94
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + ++ + + I++R +G L ++ L+ A++ T+ N +
Sbjct: 95 SPDEVRFLMGFNRDVIRARRDEMNEMGIRIRWVGRMPRLWKSVVQELQVAQEMTKDNDAM 154
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L+ NY R EI+ A + I QD+ +G + V+ KYL D+PD DL +R G
Sbjct: 155 TLYFCVNYGGRAEIADAAQKIAQDVAAGRLDPGKVNERTFQKYLYYPDMPDVDLFLRPSG 214
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S++L+WQ +Y+E VF WPDF R + A +Y RDRRFGG
Sbjct: 215 EQRTSNYLIWQSSYAEMVFQDVLWPDFDRRDLWRACLEYAKRDRRFGG 262
>gi|21230826|ref|NP_636743.1| undecaprenyl pyrophosphate synthetase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66769175|ref|YP_243937.1| undecaprenyl pyrophosphate synthase [Xanthomonas campestris pv.
campestris str. 8004]
gi|42559995|sp|Q8PAV7|UPPS_XANCP RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|21112429|gb|AAM40667.1| undecaprenyl pyrophosphate synthetase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66574507|gb|AAY49917.1| undecaprenyl pyrophosphate synthetase [Xanthomonas campestris pv.
campestris str. 8004]
Length = 258
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/247 (39%), Positives = 139/247 (56%), Gaps = 5/247 (2%)
Query: 1 MVASMMSSSP-----PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGI 55
M ++ M S P P H+ IIMDGNGRWA R PR GHR G N + + G+
Sbjct: 1 MASTAMHSEPSAAAVPRHLAIIMDGNGRWAQRRRRPRVIGHRAGARAVNRTIDFCLDKGV 60
Query: 56 KNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILC 115
LT+FAFS NW RP E+ L+KL L +G L++ ++VR IG+R +
Sbjct: 61 SALTLFAFSSENWGRPQDEVDALMKLFLHALDRGVEELQRRGVQVRFIGDRSRFTAPLRD 120
Query: 116 VLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD 175
+ AE T NT L L IA +Y R +I+ A + + ++ +G + +D +L+A +
Sbjct: 121 RMAGAERITAANTRLVLSIAASYGGRQDIAMAARALAVEVAAGRLQPEQIDEALLASRVA 180
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
+D+P PDL IRTGG+ R+S+FLLWQ+AY+E F WP+F + AL+ Y R+RR
Sbjct: 181 LADLPAPDLFIRTGGDTRISNFLLWQLAYTELWFTETLWPEFDAGVLQQALDDYAGRERR 240
Query: 236 FGGLSKK 242
FG S +
Sbjct: 241 FGLTSAQ 247
>gi|291059974|gb|ADD72709.1| di-trans,poly-cis-decaprenylcistransferase [Treponema pallidum
subsp. pallidum str. Chicago]
Length = 231
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/237 (40%), Positives = 138/237 (58%), Gaps = 14/237 (5%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S H+ IIMDGNGRWA RGL R AGHR+G++ EIVAA + + +T++ FS NW
Sbjct: 2 SAVQHVAIIMDGNGRWAERRGLRRSAGHRRGLQTAREIVAALCAIRVPFVTLYVFSTENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+R E+ L+ LI+ +LKK ++ I+V +G +L D+ ++ ++TR +
Sbjct: 62 KRSAHEVHFLMNLIRWYLKKEMSFYVEHAIRVVHLGCAQTLPPDVRSQIEYVVERTRSHR 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV-DSSLIAK-----YLDTSDVPDP 182
G + +A NY +DEI RA+K + +CS D L+ + LD +P
Sbjct: 122 GTTVALAINYGGKDEILRAVKKV--------LCSTSCPDGELLTEEAFGACLDAPQLPSV 173
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
D +IRTGG++R+S+FLLWQ AY+EF F WPDF E AL++Y LR R FGGL
Sbjct: 174 DFLIRTGGQQRMSNFLLWQSAYAEFYFTDILWPDFRVEDMLRALDEYRLRTRTFGGL 230
>gi|29839943|ref|NP_829049.1| undecaprenyl diphosphate synthase [Chlamydophila caviae GPIC]
gi|42559795|sp|Q824H0|UPPS_CHLCV RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|29834290|gb|AAP04927.1| undecaprenyl diphosphate synthase [Chlamydophila caviae GPIC]
Length = 250
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/234 (41%), Positives = 132/234 (56%), Gaps = 4/234 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAAR----GLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S P H+ IIMDGN RW L + +GH G + I+ +A +GI+ LT+FAF
Sbjct: 16 QSLPRHVAIIMDGNRRWHQQHQTQCTLKQTSGHYYGAKALPSIIESAFSLGIEVLTLFAF 75
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S N+ R E+ EL L S L + F L +N I++R IGN +L + + E +
Sbjct: 76 STENFLRSTEEVEELFSLFHSQLDEQFPYLIENKIRLRCIGNLSALPLQLQQKISEISLK 135
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T N+ +L +A NY +DE+ RA K + QD+ + S + LI YLDTS++PDPD
Sbjct: 136 THQNSHRDLVLAINYGGKDELVRAFKKLHQDLVEQKISSDSISEELIRLYLDTSEMPDPD 195
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
L+IRTGGE R+S+FLLWQ+AY+E WPDF F A+ Y R RR G
Sbjct: 196 LLIRTGGEMRVSNFLLWQIAYTELYVTDILWPDFKPNHFLDAIKAYQHRSRRGG 249
>gi|283456465|ref|YP_003361029.1| undecaprenyl pyrophosphate synthetase [Bifidobacterium dentium Bd1]
gi|283103099|gb|ADB10205.1| UppS Undecaprenyl pyrophosphate synthetase [Bifidobacterium dentium
Bd1]
Length = 258
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 137/231 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+G+IMDGNGRWA RGL R GH+ V + +A A E G++ L+++ FS NW+R
Sbjct: 28 PRHVGVIMDGNGRWAQQRGLIRTDGHQAAEPVVFDTIAGAIEAGVRYLSLYTFSTENWKR 87
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + + + + + ++VR G R L ++ L+ A+++T+ N +
Sbjct: 88 SPQEVRFLMGFSRDIIHRRVAQMDEWGVRVRWSGRRPKLWKSVIDELEVAQERTKNNKTI 147
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
++ NY R EI+ A I +++ G + V +IA +L D+PD DL+IRT G
Sbjct: 148 DVVFCLNYGGRAEIADACAAIAREVRDGRISGDRVTEKMIADHLYNPDIPDCDLVIRTSG 207
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E+R S+FL W+ AY+E F+PE +PD RE+ + +++ Y RDRRFGG+ K
Sbjct: 208 EQRTSNFLPWEAAYAELDFVPELFPDCGREVLWRSISHYVDRDRRFGGVKK 258
>gi|260853384|ref|YP_003227275.1| undecaprenyl pyrophosphate synthase [Escherichia coli O26:H11 str.
11368]
gi|260866323|ref|YP_003232725.1| undecaprenyl pyrophosphate synthase [Escherichia coli O111:H- str.
11128]
gi|257752033|dbj|BAI23535.1| undecaprenyl pyrophosphate synthase [Escherichia coli O26:H11 str.
11368]
gi|257762679|dbj|BAI34174.1| undecaprenyl pyrophosphate synthase [Escherichia coli O111:H- str.
11128]
Length = 253
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 88/226 (38%), Positives = 139/226 (61%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++AFS NW RP
Sbjct: 20 HVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPA 79
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+S L++L L SL ++N+++R+IG+ + + ++++E T N+GL L
Sbjct: 80 QEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNSGLTL 139
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA NY R +I + ++ + + ++ G++ +D ++ +++ ++ DL+IRTGGE
Sbjct: 140 NIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGEH 199
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R+S+FLLWQ+AY+E F WPDF + F ALN + R+RRFGG
Sbjct: 200 RISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGG 245
>gi|188992322|ref|YP_001904332.1| Di-trans,poly-cis-decaprenylcistransferase [Xanthomonas campestris
pv. campestris str. B100]
gi|167734082|emb|CAP52288.1| Di-trans,poly-cis-decaprenylcistransferase [Xanthomonas campestris
pv. campestris]
Length = 258
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/247 (39%), Positives = 139/247 (56%), Gaps = 5/247 (2%)
Query: 1 MVASMMSSSP-----PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGI 55
M ++ M S P P H+ IIMDGNGRWA R PR GHR G N + + G+
Sbjct: 1 MASTAMHSEPSAVAVPRHLAIIMDGNGRWAQRRRRPRVIGHRAGARAVNRTIDFCLDKGV 60
Query: 56 KNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILC 115
LT+FAFS NW RP E+ L+KL L +G L++ ++VR IG+R +
Sbjct: 61 SALTLFAFSSENWGRPQDEVDALMKLFLHALDRGVEELQRRGVQVRFIGDRSRFTAPLRD 120
Query: 116 VLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD 175
+ AE T NT L L IA +Y R +I+ A + + ++ +G + +D +L+A +
Sbjct: 121 RMAGAERITAANTRLVLSIAASYGGRQDIAMAARALAVEVAAGRLQPEQIDEALLASRVA 180
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
+D+P PDL IRTGG+ R+S+FLLWQ+AY+E F WP+F + AL+ Y R+RR
Sbjct: 181 LADLPAPDLFIRTGGDTRISNFLLWQLAYTELWFTETLWPEFDAGVLQQALDDYAGRERR 240
Query: 236 FGGLSKK 242
FG S +
Sbjct: 241 FGLTSAQ 247
>gi|283769063|ref|ZP_06341969.1| di-trans,poly-cis-decaprenylcistransferase [Bulleidia extructa
W1219]
gi|283104420|gb|EFC05797.1| di-trans,poly-cis-decaprenylcistransferase [Bulleidia extructa
W1219]
Length = 232
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/230 (40%), Positives = 137/230 (59%), Gaps = 2/230 (0%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+HI IIMDGNGRWA A+G R AGH G E I AA ++G+K+LT++AFS NW+R
Sbjct: 5 NHIAIIMDGNGRWAKAQGKIRTAGHLAGAENVRTISIAADQLGVKHLTLYAFSTENWKRS 64
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E+S ++KL F KK ++ +IG L VL EAE++++ N GL+
Sbjct: 65 QDEVSYIMKLPAIFFKKYMKEFIDRGFRMEIIGELDPLPKSTKQVLLEAEEESKRNAGLH 124
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L I NY + E A K Q + +++ +YL T ++P DL+IRT GE
Sbjct: 125 LSICMNYGGQSETVIAAKRYAQALRENPNLELTIEN--FHEYLLTKNLPPVDLMIRTSGE 182
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
+R+S++L WQ+AY+EF+F+ E WP+FS ++ + +Y RDRRFGG+ +
Sbjct: 183 QRISNYLPWQLAYAEFMFVQESWPEFSEDVLKRCMEEYVHRDRRFGGVKE 232
>gi|254373691|ref|ZP_04989175.1| hypothetical protein FTDG_01700 [Francisella novicida GA99-3548]
gi|151571413|gb|EDN37067.1| hypothetical protein FTDG_01700 [Francisella novicida GA99-3548]
Length = 257
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 94/225 (41%), Positives = 136/225 (60%), Gaps = 1/225 (0%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA R PR GHR + + + E I+ LT+FAF +NW RP
Sbjct: 28 HLAIIMDGNGRWAKNRLKPRIFGHRNSVSSVDATIEYCVENNIEMLTLFAFGRDNWLRPA 87
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+S+L+ L LK L NNI V V+G+R L D ++ +++ +E T+ NTGL L
Sbjct: 88 QEVSDLMDLFYKTLKDKTPKLHDNNIVVTVVGDRSRLSDKLIGMIEYSESLTKSNTGLKL 147
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A +Y+ R +I A + I ++++ G + ++D + AKYL ++P DL+IRT GE
Sbjct: 148 RLAVDYAGRWDIVEATRAIAREVDIGKLSVDEIDQNSFAKYLVGGNMP-VDLLIRTSGEV 206
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RLSDF+LWQ+AY+E F WPDFS++ A+ + R RRFG
Sbjct: 207 RLSDFMLWQLAYAEMYFTDIMWPDFSKQELTRAVEYFYSRQRRFG 251
>gi|283458098|ref|YP_003362712.1| undecaprenyl pyrophosphate synthase [Rothia mucilaginosa DY-18]
gi|283134127|dbj|BAI64892.1| undecaprenyl pyrophosphate synthase [Rothia mucilaginosa DY-18]
Length = 263
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 135/227 (59%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ ++MDGNGRWA RGLPR GHR G ++VA A E+GI +T +AFS NW+R
Sbjct: 28 QHVAVVMDGNGRWANERGLPRTEGHRAGEAALLDVVAGAIEMGIPYVTAYAFSTENWKRS 87
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE++ +++ L++ +LK +++R G R L +++ L+ E +T NT
Sbjct: 88 PSEVAFIMRFSTEVLQRQLETLKTWGVRIRWAGRRPKLWKNVIEELEHCERETIDNTVCT 147
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L + NY R EI+ A I D +G + ++ I KYLD D+PD DL +R+ GE
Sbjct: 148 LTMCVNYGGRAEIADAAAAIAADAVAGKIKPGNITEKTIQKYLDEPDLPDVDLFLRSSGE 207
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+R+S+FLLWQ AY+E +F+ WPD R + A+ +Y RDRR+GG
Sbjct: 208 QRISNFLLWQSAYAEMIFMNVLWPDVDRRTLWEAVEEYARRDRRYGG 254
>gi|323157989|gb|EFZ44091.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
EPECa14]
gi|323176488|gb|EFZ62080.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli 1180]
Length = 252
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/226 (38%), Positives = 139/226 (61%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++AFS NW RP
Sbjct: 19 HVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPA 78
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+S L++L L SL ++N+++R+IG+ + + ++++E T N+GL L
Sbjct: 79 QEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNSGLTL 138
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA NY R +I + ++ + + ++ G++ +D ++ +++ ++ DL+IRTGGE
Sbjct: 139 NIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGEH 198
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R+S+FLLWQ+AY+E F WPDF + F ALN + R+RRFGG
Sbjct: 199 RISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGG 244
>gi|328955483|ref|YP_004372816.1| Undecaprenyl pyrophosphate synthetase [Coriobacterium glomerans
PW2]
gi|328455807|gb|AEB07001.1| Undecaprenyl pyrophosphate synthetase [Coriobacterium glomerans
PW2]
Length = 264
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/238 (38%), Positives = 136/238 (57%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+A++ + P H+ IMDGNGRWA ARGL R GH+ GI EI+ +G+ L+ +
Sbjct: 21 LAALDLTRIPSHVSCIMDGNGRWAIARGLSRAEGHKAGIVALREIITTCVRLGVDVLSAY 80
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E++ L+ L L++ +++V +G+ +L V +
Sbjct: 81 AFSTENWTRPQHEVNLLMHLFAKTFIDELPLLRREDVRVVFLGDISALPRKTREVFEFGL 140
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ + G+ L +A NY R EI+RA + I Q + +G + DVD ++ L T D+PD
Sbjct: 141 RECENHRGMILALAVNYGGRAEITRAARLIAQQVAAGQLALSDVDERTLSDRLYTVDLPD 200
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
P+L+IRT GE R+S++LLWQ+AY+EF WPDF R A+ Y R+RRFGG+
Sbjct: 201 PELVIRTSGEFRVSNYLLWQIAYAEFYVTDTCWPDFDRWGLLEAILSYQGRERRFGGV 258
>gi|297825231|ref|XP_002880498.1| cis-prenyltransferase [Arabidopsis lyrata subsp. lyrata]
gi|297326337|gb|EFH56757.1| cis-prenyltransferase [Arabidopsis lyrata subsp. lyrata]
Length = 292
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/229 (40%), Positives = 133/229 (58%), Gaps = 2/229 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I+DGN RWA GL GH G + EI E+GI ++ F FS NW R
Sbjct: 61 PRHVAFILDGNRRWAKRAGLTTQQGHEAGAKRLVEIAELCFELGIHTVSAFVFSTENWGR 120
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ LI+ + K ++ I+V VIGN+ ++ + +L L E E+ T+
Sbjct: 121 DKIEVDNLMSLIQHYRKSDIQFFHRSEIRVSVIGNQTNISEHLLQKLHEIEEATKGYKNK 180
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT--SDVPDPDLIIRT 188
+L +A +YS R +I A K++ + E G + DVD +LI + L T SD P PDL+IRT
Sbjct: 181 HLIVAIDYSGRFDIMHACKSLVKKSEKGLIREEDVDEALIERELLTNCSDFPSPDLMIRT 240
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
GE+R+S+F LWQ+AY+E F P +WPDF ++ AL+ Y R+RRFG
Sbjct: 241 SGEQRISNFFLWQLAYTELFFSPVFWPDFDKDKLLEALDSYQRRERRFG 289
>gi|21242170|ref|NP_641752.1| undecaprenyl pyrophosphate synthase [Xanthomonas axonopodis pv.
citri str. 306]
gi|42559996|sp|Q8PMK9|UPPS_XANAC RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|21107586|gb|AAM36288.1| undecaprenyl pyrophosphate synthetase [Xanthomonas axonopodis pv.
citri str. 306]
Length = 257
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/238 (39%), Positives = 138/238 (57%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
++S++ P HI IIMDGNGRWA R PR GHR G N + E G+ LT+FAFS
Sbjct: 9 VLSAAVPRHIAIIMDGNGRWAQRRRRPRVIGHRAGARAVNRTIDFCLEKGVSALTLFAFS 68
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP E+ L+KL L + L++ ++VR IG+R + + AE T
Sbjct: 69 SENWGRPQDEVDALMKLFLHALDREVEELQRRGVQVRFIGDRSRFAAPLRDRMAGAERST 128
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N+ L L IA +Y R +I+ A + + +D+ +G + +D +L++ + +D+P PDL
Sbjct: 129 AANSRLVLSIAASYGGRQDIASAARALAEDVAAGRLQPEQIDEALLSSRVALADLPAPDL 188
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTGG+ R+S+FLLWQ+AY+E F WP+F + AL+ Y R+RRFG S +
Sbjct: 189 FIRTGGDTRISNFLLWQLAYTELWFTETLWPEFDAGVLQQALDDYAGRERRFGLTSAQ 246
>gi|171742449|ref|ZP_02918256.1| hypothetical protein BIFDEN_01561 [Bifidobacterium dentium ATCC
27678]
gi|306822359|ref|ZP_07455738.1| di-trans,poly-cis-decaprenylcistransferase [Bifidobacterium dentium
ATCC 27679]
gi|309802150|ref|ZP_07696259.1| di-trans,poly-cis-decaprenylcistransferase [Bifidobacterium dentium
JCVIHMP022]
gi|171278063|gb|EDT45724.1| hypothetical protein BIFDEN_01561 [Bifidobacterium dentium ATCC
27678]
gi|304554357|gb|EFM42265.1| di-trans,poly-cis-decaprenylcistransferase [Bifidobacterium dentium
ATCC 27679]
gi|308221230|gb|EFO77533.1| di-trans,poly-cis-decaprenylcistransferase [Bifidobacterium dentium
JCVIHMP022]
Length = 263
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 137/231 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+G+IMDGNGRWA RGL R GH+ V + +A A E G++ L+++ FS NW+R
Sbjct: 33 PRHVGVIMDGNGRWAQQRGLIRTDGHQAAEPVVFDTIAGAIEAGVRYLSLYTFSTENWKR 92
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + + + + + ++VR G R L ++ L+ A+++T+ N +
Sbjct: 93 SPQEVRFLMGFSRDIIHRRVAQMDEWGVRVRWSGRRPKLWKSVIDELEVAQERTKNNKTI 152
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
++ NY R EI+ A I +++ G + V +IA +L D+PD DL+IRT G
Sbjct: 153 DVVFCLNYGGRAEIADACAAIAREVRDGRISGDRVTEKMIADHLYNPDIPDCDLVIRTSG 212
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E+R S+FL W+ AY+E F+PE +PD RE+ + +++ Y RDRRFGG+ K
Sbjct: 213 EQRTSNFLPWEAAYAELDFVPELFPDCGREVLWRSISHYVDRDRRFGGVKK 263
>gi|241764761|ref|ZP_04762770.1| undecaprenyl diphosphate synthase [Acidovorax delafieldii 2AN]
gi|241365751|gb|EER60423.1| undecaprenyl diphosphate synthase [Acidovorax delafieldii 2AN]
Length = 243
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/239 (42%), Positives = 138/239 (57%), Gaps = 9/239 (3%)
Query: 6 MSSSP--PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
MS SP P HI I+MDGNGRWA R LPR AGH++G++ A AE G+ LT+FAF
Sbjct: 1 MSVSPVVPHHIAIVMDGNGRWATRRFLPRLAGHKQGVDSLRRCARACAERGVAVLTVFAF 60
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP E+S L++L+ L + LKK+ +++ +G R L + L +AE
Sbjct: 61 SSENWNRPADEVSGLMELLALALAREVPQLKKDGVRLFFVGERAGLSPKVRDGLAQAEAA 120
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NT L L + FNY R +I++A + E + + + + + VPDPD
Sbjct: 121 TAENTRLVLNVCFNYGGRWDIAQAAAALAARGEP-------ITEASLHGAMALAHVPDPD 173
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRTGGE R+S+FLLWQVAYSE F WPDF A+ Y+ R+RRFG S++
Sbjct: 174 LVIRTGGEMRISNFLLWQVAYSELYFSDRLWPDFDESALDEAIAVYSARERRFGKTSEQ 232
>gi|312140281|ref|YP_004007617.1| di-trans,poly-cis-decaprenylcistransferase upps [Rhodococcus equi
103S]
gi|311889620|emb|CBH48937.1| di-trans,poly-cis-decaprenylcistransferase UppS [Rhodococcus equi
103S]
Length = 270
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/229 (39%), Positives = 138/229 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ ++MDGNGRWA RGLPR AGH +G +V + VA E+G+K L+ +AFS NW+R
Sbjct: 39 PNHVALVMDGNGRWAQDRGLPRTAGHERGEDVLMDTVAGCIEIGVKWLSAYAFSTENWKR 98
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ + + ++VR G R L ++ L+ AE+ T+ NT +
Sbjct: 99 SPEEVKFLMGFNRDVIRRRRDEMHEMGVRVRWAGRRPRLWRSVIKELEIAEELTKDNTVM 158
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R EI+ A + I + +G + + + AKYLD D+PD DL +R G
Sbjct: 159 TLTMCVNYGGRAEIADAAREIARRAAAGEIDPEKISEATFAKYLDEPDMPDVDLFLRPSG 218
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+R S+FL+WQ AY+E VF + +PDF R + A +Y RDRRFGG+
Sbjct: 219 EQRTSNFLIWQAAYAELVFQEKLFPDFDRRDLWAACVEYASRDRRFGGV 267
>gi|297194473|ref|ZP_06911871.1| undecaprenyl pyrophosphate synthetase 2 [Streptomyces
pristinaespiralis ATCC 25486]
gi|197718716|gb|EDY62624.1| undecaprenyl pyrophosphate synthetase 2 [Streptomyces
pristinaespiralis ATCC 25486]
Length = 281
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 136/228 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ +MDGNGRWA RGLPR GH+ G V +++ E+G+KNL+++AFS NW+R
Sbjct: 35 PNHVACVMDGNGRWAKERGLPRTEGHKVGEGVVLDVLKGCLEMGVKNLSLYAFSTENWKR 94
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ + + I++R +G + ++ L+ A++QT N +
Sbjct: 95 SPDEVRFLMNFNRDVIRRRRDEMDELGIRIRWVGRMPKMWKSVVQELQVAQEQTVGNDAM 154
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L+ NY R E++ A + + +D+ +G + V+ AKYL D+PD DL +R G
Sbjct: 155 TLYFCVNYGGRAEVADAAQALARDVAAGRLDPGKVNEKTFAKYLYYPDMPDVDLFLRPSG 214
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R+S++L+WQ +Y+E VF WPDF R + A +Y RDRRFGG
Sbjct: 215 EQRISNYLIWQSSYAEMVFQDVLWPDFDRRDLWRACLEYAQRDRRFGG 262
>gi|50084552|ref|YP_046062.1| undecaprenyl pyrophosphate synthetase [Acinetobacter sp. ADP1]
gi|73920182|sp|Q6FCH1|UPPS_ACIAD RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|49530528|emb|CAG68240.1| undecaprenyl pyrophosphate synthetase (di-trans,
poly-cis-decaprenylcistransferase) [Acinetobacter sp.
ADP1]
Length = 249
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/235 (39%), Positives = 139/235 (59%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P H+ IIMDGN R+A + + GHR+G + IV G++ LT+FAFS N
Sbjct: 7 SHLPKHVAIIMDGNNRFAKKNQMQKGDGHREGKNSLDPIVEHCCTRGVQALTVFAFSSEN 66
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP E+ L+KL++ + + ++K NI +R IG+R L + + ++ AE++T
Sbjct: 67 WNRPAFEVDLLMKLLEEAIHEQLPRMRKFNIALRFIGDRSKLSEHLTDLMTHAENETAHF 126
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T + L IA +Y +I+ A K I +D+ G V +D+ L +Y+ + +P DL+IR
Sbjct: 127 TSMTLTIAISYGGMWDITDAAKQIAKDVSDGIVDIEQIDTHLFGRYVSLNQLPPVDLLIR 186
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGG+ RLS+FLLWQ AY+E F WP+FS + F HAL + R+RRFG S++
Sbjct: 187 TGGDYRLSNFLLWQAAYAELYFTETLWPEFSIDEFDHALAVFAGRERRFGKTSEQ 241
>gi|194477241|ref|YP_002049420.1| Undecaprenyl pyrophosphate synthetase (UPPS) [Paulinella
chromatophora]
gi|171192248|gb|ACB43210.1| Undecaprenyl pyrophosphate synthetase (UPPS) [Paulinella
chromatophora]
Length = 254
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/230 (38%), Positives = 130/230 (56%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA RGLPR GHR G+E ++ ++ G+ LT +AFS NW R
Sbjct: 25 PSHIAVIMDGNGRWAQRRGLPRIMGHRAGVEALKRTLSLCSDWGVSALTAYAFSTENWNR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L + L++ +L++ + +R +G+ L + ++ A ++T N G+
Sbjct: 85 PYEEVGFLMSLFERVLERELEALERAKVCIRFLGDLEVLPLRLQELIASATERTADNKGI 144
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ NY R E+ +A + + + G + +D + L T+ DPDL+IRT G
Sbjct: 145 RFNVCINYGGRRELVKAAQILAERARIGKLDPETIDEACFEAELHTAGESDPDLLIRTSG 204
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E RLS+FLLWQ+AYSE WPDF+RE AL + R RRFGG+
Sbjct: 205 EMRLSNFLLWQLAYSEIHITDMLWPDFNREALVLALEDFQRRQRRFGGVE 254
>gi|89255662|ref|YP_513023.1| undecaprenyl pyrophosphate synthase [Francisella tularensis subsp.
holarctica LVS]
gi|134302593|ref|YP_001122564.1| undecaprenyl pyrophosphate synthetase [Francisella tularensis
subsp. tularensis WY96-3418]
gi|187932151|ref|YP_001892136.1| undecaprenyl diphosphate synthase [Francisella tularensis subsp.
mediasiatica FSC147]
gi|224456551|ref|ZP_03665024.1| undecaprenyl diphosphate synthase [Francisella tularensis subsp.
tularensis MA00-2987]
gi|89143493|emb|CAJ78669.1| undecaprenyl pyrophosphate synthetase [Francisella tularensis
subsp. holarctica LVS]
gi|134050370|gb|ABO47441.1| undecaprenyl diphosphate synthase [Francisella tularensis subsp.
tularensis WY96-3418]
gi|187713060|gb|ACD31357.1| undecaprenyl diphosphate synthase [Francisella tularensis subsp.
mediasiatica FSC147]
gi|282158614|gb|ADA78005.1| undecaprenyl diphosphate synthase [Francisella tularensis subsp.
tularensis NE061598]
Length = 240
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/225 (41%), Positives = 137/225 (60%), Gaps = 1/225 (0%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA +R PR GHR + + + E I+ LT+FAF +NW RP
Sbjct: 11 HLAIIMDGNGRWAKSRLKPRIFGHRNSVSSVDATIEYCVENNIEMLTLFAFGRDNWLRPA 70
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+S+L+ L LK L NNI V V+G+R L + ++ +++ +E T+ NTGL L
Sbjct: 71 QEVSDLMDLFYKTLKDKTPKLHDNNIVVTVVGDRSRLSNKLIGMIEYSESLTKSNTGLKL 130
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A +Y+ R +I A + I ++++ G + ++D + AKYL ++P DL+IRT GE
Sbjct: 131 RLAVDYAGRWDIVEATRAIAREVDIGKLSVDEIDQNSFAKYLVGGNMP-VDLLIRTSGEV 189
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RLSDF+LWQ+AY+E F WPDFS++ A+ + R RRFG
Sbjct: 190 RLSDFMLWQLAYAEMYFTDIMWPDFSKQELTRAVEYFYSRQRRFG 234
>gi|255327482|ref|ZP_05368549.1| di-trans,poly-cis-decaprenylcistransferase [Rothia mucilaginosa
ATCC 25296]
gi|255295376|gb|EET74726.1| di-trans,poly-cis-decaprenylcistransferase [Rothia mucilaginosa
ATCC 25296]
Length = 263
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 135/227 (59%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ ++MDGNGRWA RGLPR GHR G ++VA A E+GI +T +AFS NW+R
Sbjct: 28 QHVAVVMDGNGRWANERGLPRTEGHRAGEAALLDVVAGAIEMGIPYVTAYAFSTENWKRS 87
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE++ +++ L++ +LK +++R G R L +++ L+ E +T NT
Sbjct: 88 PSEVAFIMRFSTEVLQRQLATLKTWGVRIRWAGRRPKLWKNVIEELEHCERETIDNTVCT 147
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L + NY R EI+ A I D +G + ++ I KYLD D+PD DL +R+ GE
Sbjct: 148 LTMCVNYGGRAEIADAAAAIAADAVAGKLKPGNITEKTIQKYLDEPDLPDVDLFLRSSGE 207
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+R+S+FLLWQ AY+E +F+ WPD R + A+ +Y RDRR+GG
Sbjct: 208 QRISNFLLWQSAYAEMIFMNVLWPDVDRRTLWEAVEEYARRDRRYGG 254
>gi|258406065|ref|YP_003198807.1| undecaprenyl diphosphate synthase [Desulfohalobium retbaense DSM
5692]
gi|257798292|gb|ACV69229.1| undecaprenyl diphosphate synthase [Desulfohalobium retbaense DSM
5692]
Length = 231
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/234 (40%), Positives = 130/234 (55%), Gaps = 4/234 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M+S P H+ IIMDGNGRWA RGLPR GH+ G + IV A + I +T++ FS
Sbjct: 1 MTSPPLQHLAIIMDGNGRWARQRGLPRSEGHKAGTQSAKAIVTACRKRAIPYVTLYTFSR 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP EI+ L L+ FL++ LK+ I++ ++G+ L ++ QT
Sbjct: 61 ENWARPKEEINFLFDLLVRFLRREVQDLKEQGIRLNILGDLKGLPAAPRRAVEHVCRQTA 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
+ L +A NYS R+EI R + + Q V +V A+ L T PDPDL+
Sbjct: 121 DGRAMTLNLALNYSGREEILRVCRELLQQ----QVAPEEVTVEQFAQRLYTGGQPDPDLL 176
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRT GEKRLS++LL+Q AY+EF F WPDF AL++Y R RRFG +
Sbjct: 177 IRTSGEKRLSNYLLFQCAYTEFSFPEVLWPDFDEHELDAALHEYQQRQRRFGSI 230
>gi|325677061|ref|ZP_08156731.1| di-trans,poly-cis-decaprenylcistransferase [Rhodococcus equi ATCC
33707]
gi|325552132|gb|EGD21824.1| di-trans,poly-cis-decaprenylcistransferase [Rhodococcus equi ATCC
33707]
Length = 267
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 138/230 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ ++MDGNGRWA RGLPR AGH +G +V + VA E+G+K L+ +AFS NW+R
Sbjct: 36 PNHVALVMDGNGRWAQDRGLPRTAGHERGEDVLMDTVAGCIEIGVKWLSAYAFSTENWKR 95
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ + + ++VR G R L ++ L+ AE+ T+ NT +
Sbjct: 96 SPEEVKFLMGFNRDVIRRRRDEMHEMGVRVRWAGRRPRLWRSVIKELEIAEELTKDNTVM 155
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R EI+ A + I + +G + + + AKYLD D+PD DL +R G
Sbjct: 156 TLTMCVNYGGRAEIADAAREIARRAAAGEIDPEKISEATFAKYLDEPDMPDVDLFLRPSG 215
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E+R S+FL+WQ AY+E VF + +PDF R + A +Y RDRRFGG+
Sbjct: 216 EQRTSNFLIWQAAYAELVFQEKLFPDFDRRDLWAACVEYASRDRRFGGVK 265
>gi|289705002|ref|ZP_06501415.1| di-trans,poly-cis-decaprenylcistransferase [Micrococcus luteus
SK58]
gi|289558261|gb|EFD51539.1| di-trans,poly-cis-decaprenylcistransferase [Micrococcus luteus
SK58]
Length = 287
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/235 (40%), Positives = 138/235 (58%), Gaps = 8/235 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I+MDGNGRWA RGLPR GHR G ++VA A E+GI +++ +AFS NWRR
Sbjct: 28 PRHVAIVMDGNGRWANQRGLPRTEGHRAGEAALLDVVAGAVELGIGHVSAYAFSTENWRR 87
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + L++ +L N+++R G L ++ L+EAE+ TR NTG
Sbjct: 88 SAEEVRFLMGFSRDVLRRQRDTLHSWNVRIRWNGRAPRLWTPVIRELQEAEELTRHNTGT 147
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD--------TSDVPDP 182
L + NY SR EI ++ I +++ +G + ++ +I +YLD VPD
Sbjct: 148 TLHMCVNYGSRAEILDGVQAIAEEVRAGRMRPGEISEDVITRYLDRGFRTGQDVDVVPDV 207
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL +RT GE+RLS++LLWQ AY+E +F+ WPD R + A+ Y RDRR+G
Sbjct: 208 DLFLRTSGEQRLSNYLLWQSAYAELLFLDVLWPDVDRRTLWAAVETYARRDRRYG 262
>gi|307298260|ref|ZP_07578064.1| undecaprenyl diphosphate synthase [Thermotogales bacterium
mesG1.Ag.4.2]
gi|306916346|gb|EFN46729.1| undecaprenyl diphosphate synthase [Thermotogales bacterium
mesG1.Ag.4.2]
Length = 227
Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/229 (40%), Positives = 133/229 (58%), Gaps = 6/229 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IMDGNGRWA RGL R GHRKG EV + A++GI+ +T++AFS NWRR
Sbjct: 4 PVHVAFIMDGNGRWAKKRGLERIEGHRKGAEVADAASHWCADLGIRYVTLYAFSTENWRR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L +L+ ++ S+ + +++R +G L ++ + + E++T + L
Sbjct: 64 PKEEVEFLFELMLLYISSKVGSMLEEGVRMRFMGRLNELPPELGDFVFQIENKTSMGKKL 123
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
++ +A NY R EI A+ I + + + IA L DVP+PDLIIRT G
Sbjct: 124 DVIVALNYGGRAEIVDAVNEILK------IGKEQISEEDIAMNLYLPDVPEPDLIIRTSG 177
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+RLS+FL WQ YSE F WPDF++E F A++ Y+ R RRFG L
Sbjct: 178 EERLSNFLTWQSVYSELFFTGTLWPDFTKEEFHRAVDDYSKRKRRFGAL 226
>gi|15639591|ref|NP_219041.1| undecaprenyl pyrophosphate synthase [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189025829|ref|YP_001933601.1| undecaprenyl pyrophosphate synthase [Treponema pallidum subsp.
pallidum SS14]
gi|6136147|sp|O83612|UPPS_TREPA RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|3322897|gb|AAC65576.1| conserved hypothetical protein [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189018404|gb|ACD71022.1| hypothetical protein TPASS_0603 [Treponema pallidum subsp. pallidum
SS14]
Length = 228
Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/234 (40%), Positives = 137/234 (58%), Gaps = 14/234 (5%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA RGL R AGHR+G++ EIVAA + + +T++ FS NW+R
Sbjct: 2 QHVAIIMDGNGRWAERRGLRRSAGHRRGLQTAREIVAALCAIRVPFVTLYVFSTENWKRS 61
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E+ L+ LI+ +LKK ++ I+V +G +L D+ ++ ++TR + G
Sbjct: 62 AHEVHFLMNLIRWYLKKEMSFYVEHAIRVVHLGCAQTLPPDVRSQIEYVVERTRSHRGTT 121
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV-DSSLIAK-----YLDTSDVPDPDLI 185
+ +A NY +DEI RA+K + +CS D L+ + LD +P D +
Sbjct: 122 VALAINYGGKDEILRAVKKV--------LCSTSCPDGELLTEEAFGACLDAPQLPSVDFL 173
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRTGG++R+S+FLLWQ AY+EF F WPDF E AL++Y LR R FGGL
Sbjct: 174 IRTGGQQRMSNFLLWQSAYAEFYFTDILWPDFRVEDMLRALDEYRLRTRTFGGL 227
>gi|54113225|gb|AAV29246.1| NT02FT0090 [synthetic construct]
Length = 257
Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/225 (41%), Positives = 137/225 (60%), Gaps = 1/225 (0%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA +R PR GHR + + + E I+ LT+FAF +NW RP
Sbjct: 28 HLAIIMDGNGRWAKSRLKPRIFGHRNSVSSVDATIEYCVENNIEMLTLFAFGRDNWLRPA 87
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+S+L+ L LK L NNI V V+G+R L + ++ +++ +E T+ NTGL L
Sbjct: 88 QEVSDLMDLFYKTLKDKTPKLHDNNIVVTVVGDRSRLSNKLIGMIEYSESLTKSNTGLKL 147
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A +Y+ R +I A + I ++++ G + ++D + AKYL ++P DL+IRT GE
Sbjct: 148 RLAVDYAGRWDIVEATRAIAREVDIGKLSVDEIDQNSFAKYLVGGNMP-VDLLIRTSGEV 206
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RLSDF+LWQ+AY+E F WPDFS++ A+ + R RRFG
Sbjct: 207 RLSDFMLWQLAYAEMYFTDIMWPDFSKQELTRAVEYFYSRQRRFG 251
>gi|291286435|ref|YP_003503251.1| undecaprenyl diphosphate synthase [Denitrovibrio acetiphilus DSM
12809]
gi|290883595|gb|ADD67295.1| undecaprenyl diphosphate synthase [Denitrovibrio acetiphilus DSM
12809]
Length = 244
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 131/227 (57%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA +G PR AGH KG EV +IV + +G+ LT++ FS+ NW R
Sbjct: 7 PEHLAIIMDGNGRWAKIQGKPRIAGHSKGAEVVRDIVKYTSRLGVGYLTLYTFSMENWLR 66
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L++ +LK L NNI++ V G L + V+ EA + NTG+
Sbjct: 67 PKDEVGFLMELLEEYLKGEISELNNNNIRLTVSGRTQLLPEKTQAVVNEAVENLSKNTGM 126
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y R EI A K + + G + ++ +++ ++PD DL+IRT G
Sbjct: 127 VLNLALSYGGRSEIVDAAKQMAKLALQGEIELDKIERDEFGQFMYHPEMPDIDLLIRTSG 186
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+F+LW+ AYSE F WPDF A +YN R RRFG
Sbjct: 187 EIRISNFMLWRCAYSELFFTDVLWPDFGTANIDEAFEEYNRRVRRFG 233
>gi|62258192|gb|AAX77773.1| unknown protein [synthetic construct]
Length = 292
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 93/225 (41%), Positives = 137/225 (60%), Gaps = 1/225 (0%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA +R PR GHR + + + E I+ LT+FAF +NW RP
Sbjct: 54 HLAIIMDGNGRWAKSRLKPRIFGHRNSVSSVDATIEYCVENNIEMLTLFAFGRDNWLRPA 113
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+S+L+ L LK L NNI V V+G+R L + ++ +++ +E T+ NTGL L
Sbjct: 114 QEVSDLMDLFYKTLKDKTPKLHDNNIVVTVVGDRSRLSNKLIGMIEYSESLTKSNTGLKL 173
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A +Y+ R +I A + I ++++ G + ++D + AKYL ++P DL+IRT GE
Sbjct: 174 RLAVDYAGRWDIVEATRAIAREVDIGKLSVDEIDQNSFAKYLVGGNMP-VDLLIRTSGEV 232
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RLSDF+LWQ+AY+E F WPDFS++ A+ + R RRFG
Sbjct: 233 RLSDFMLWQLAYAEMYFTDIMWPDFSKQELTRAVEYFYSRQRRFG 277
>gi|152968768|ref|YP_001333877.1| undecaprenyl pyrophosphate synthase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|262044755|ref|ZP_06017802.1| undecaprenyl diphosphate synthase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330001653|ref|ZP_08304079.1| di-trans,poly-cis-decaprenylcistransferase [Klebsiella sp. MS 92-3]
gi|150953617|gb|ABR75647.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|259037905|gb|EEW39129.1| undecaprenyl diphosphate synthase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328537595|gb|EGF63815.1| di-trans,poly-cis-decaprenylcistransferase [Klebsiella sp. MS 92-3]
Length = 258
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 141/231 (61%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++AFS NW RP
Sbjct: 25 HVAIIMDGNGRWAKRQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPA 84
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+S L++L L SL ++N+++R+IG+ + + +++AE T NTGL L
Sbjct: 85 QEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTTRFNARLQERIRKAEALTANNTGLTL 144
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA NY R +I++ ++ + + ++ G++ + ++++ + ++ DL+IRTGGE
Sbjct: 145 NIAANYGGRWDITQGVRLLAKQVQDGTLLPEQITEDMLSQQVCMHELAPVDLVIRTGGEH 204
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
R+S+FL+WQ+AY+E F WPDF+ + F AL+ + R+RRFGG G
Sbjct: 205 RISNFLIWQIAYAELYFTDVLWPDFAEQDFEGALHAFVNRERRFGGTEPGG 255
>gi|56707470|ref|YP_169366.1| undecaprenyl pyrophosphate synthase [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110669941|ref|YP_666498.1| undecaprenyl pyrophosphate synthetase [Francisella tularensis
subsp. tularensis FSC198]
gi|115314163|ref|YP_762886.1| undecaprenyl pyrophosphate synthetase [Francisella tularensis
subsp. holarctica OSU18]
gi|254367053|ref|ZP_04983089.1| undecaprenyl pyrophosphate synthetase [Francisella tularensis
subsp. holarctica 257]
gi|254368531|ref|ZP_04984547.1| undecaprenyl pyrophosphate synthetase [Francisella tularensis
subsp. holarctica FSC022]
gi|254370836|ref|ZP_04986841.1| undecaprenyl pyrophosphate synthetase [Francisella tularensis
subsp. tularensis FSC033]
gi|254874308|ref|ZP_05247018.1| undecaprenyl pyrophosphate synthetase [Francisella tularensis
subsp. tularensis MA00-2987]
gi|73920259|sp|Q5NHX6|UPPS_FRATT RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|56603962|emb|CAG44950.1| undecaprenyl pyrophosphate synthetase [Francisella tularensis
subsp. tularensis SCHU S4]
gi|110320274|emb|CAL08333.1| undecaprenyl pyrophosphate synthetase [Francisella tularensis
subsp. tularensis FSC198]
gi|115129062|gb|ABI82249.1| di-trans,poly-cis-decaprenylcistransferase [Francisella tularensis
subsp. holarctica OSU18]
gi|134252879|gb|EBA51973.1| undecaprenyl pyrophosphate synthetase [Francisella tularensis
subsp. holarctica 257]
gi|151569079|gb|EDN34733.1| undecaprenyl pyrophosphate synthetase [Francisella tularensis
subsp. tularensis FSC033]
gi|157121434|gb|EDO65625.1| undecaprenyl pyrophosphate synthetase [Francisella tularensis
subsp. holarctica FSC022]
gi|254840307|gb|EET18743.1| undecaprenyl pyrophosphate synthetase [Francisella tularensis
subsp. tularensis MA00-2987]
Length = 257
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 93/225 (41%), Positives = 137/225 (60%), Gaps = 1/225 (0%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA +R PR GHR + + + E I+ LT+FAF +NW RP
Sbjct: 28 HLAIIMDGNGRWAKSRLKPRIFGHRNSVSSVDATIEYCVENNIEMLTLFAFGRDNWLRPA 87
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+S+L+ L LK L NNI V V+G+R L + ++ +++ +E T+ NTGL L
Sbjct: 88 QEVSDLMDLFYKTLKDKTPKLHDNNIVVTVVGDRSRLSNKLIGMIEYSESLTKSNTGLKL 147
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A +Y+ R +I A + I ++++ G + ++D + AKYL ++P DL+IRT GE
Sbjct: 148 RLAVDYAGRWDIVEATRAIAREVDIGKLSVDEIDQNSFAKYLVGGNMP-VDLLIRTSGEV 206
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RLSDF+LWQ+AY+E F WPDFS++ A+ + R RRFG
Sbjct: 207 RLSDFMLWQLAYAEMYFTDIMWPDFSKQELTRAVEYFYSRQRRFG 251
>gi|302540347|ref|ZP_07292689.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces
hygroscopicus ATCC 53653]
gi|302457965|gb|EFL21058.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces
himastatinicus ATCC 53653]
Length = 313
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 134/227 (59%), Gaps = 1/227 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWAA RGL R GH G+ +V A E G+++L++F FS NW R
Sbjct: 86 PRHLAIIMDGNGRWAALRGLSRTRGHEAGVLALPRVVDTALEEGVEHLSLFFFSTENWNR 145
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E++ L++L L F + + +++R +G+ L L L+ AE +T N +
Sbjct: 146 PRAEVAALMRLTAQ-LADVFRAYGERGVRLRWLGSEARLPRATLAALRRAEAETAGNRAM 204
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L FN+ R+EI+RA ++ + G++ +D +L ++L D+PD D+++RT G
Sbjct: 205 TLAFCFNHGGREEIARAATSLARASADGALDPGLIDEALFTRHLPHGDLPDIDMLVRTSG 264
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+R+S+F+LW+ AY+E F+ WPDF+ E L + R RRFG
Sbjct: 265 EQRISNFMLWRAAYAELFFVDTLWPDFTAEELRGLLAAFAGRKRRFG 311
>gi|238893170|ref|YP_002917904.1| undecaprenyl pyrophosphate synthase [Klebsiella pneumoniae
NTUH-K2044]
gi|238545486|dbj|BAH61837.1| undecaprenyl pyrophosphate synthetase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 252
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 141/231 (61%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++AFS NW RP
Sbjct: 19 HVAIIMDGNGRWAKRQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPA 78
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+S L++L L SL ++N+++R+IG+ + + +++AE T NTGL L
Sbjct: 79 QEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTTRFNARLQERIRKAEALTANNTGLTL 138
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA NY R +I++ ++ + + ++ G++ + ++++ + ++ DL+IRTGGE
Sbjct: 139 NIAANYGGRWDITQGVRLLAKQVQDGTLLPEQITEDMLSQQVCMHELAPVDLVIRTGGEH 198
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
R+S+FL+WQ+AY+E F WPDF+ + F AL+ + R+RRFGG G
Sbjct: 199 RISNFLIWQIAYAELYFTDVLWPDFAEQDFEGALHAFVNRERRFGGTEPGG 249
>gi|296454501|ref|YP_003661644.1| undecaprenyl diphosphate synthase [Bifidobacterium longum subsp.
longum JDM301]
gi|296183932|gb|ADH00814.1| undecaprenyl diphosphate synthase [Bifidobacterium longum subsp.
longum JDM301]
Length = 262
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 86/229 (37%), Positives = 136/229 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+IMDGNGRWA RG+ R GH+ V + +A A E G++ L+++ FS NW+R
Sbjct: 33 PRHIGVIMDGNGRWAKQRGMVRTNGHQAAEPVVFDTIAGAIEAGVRYLSLYTFSTENWKR 92
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + + + + + ++VR G R L ++ L+ AE++T+ N +
Sbjct: 93 SPQEVRFLMGFSREIIHRRVEQMDEWGVRVRWSGRRPKLWKSVIDELEAAEERTKNNKVI 152
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
++ NY R EI+ A I +++ G + V +IA +L DVPD DL+IRT G
Sbjct: 153 DVVFCINYGGRAEIADACAAIAREVRDGKISGDRVTEKMIADHLYNPDVPDCDLVIRTSG 212
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+R S+FL W+ AY+E F+PE +PD R++ + +++ Y RDRRFGG+
Sbjct: 213 EQRTSNFLPWEAAYAELDFVPELFPDCGRDVLWRSIDHYIHRDRRFGGV 261
>gi|116625349|ref|YP_827505.1| undecaprenyl pyrophosphate synthase [Candidatus Solibacter usitatus
Ellin6076]
gi|116228511|gb|ABJ87220.1| Undecaprenyl pyrophosphate synthetase [Candidatus Solibacter
usitatus Ellin6076]
Length = 236
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 93/225 (41%), Positives = 130/225 (57%), Gaps = 15/225 (6%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H GIIMDGNGRWAAARGLPR GHR G+E +V AA + G+ LT+FAFS +NW+RP
Sbjct: 12 HCGIIMDGNGRWAAARGLPRILGHRAGVEAARRVVEAAPDAGVGILTLFAFSSDNWQRPA 71
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+E+ L++L+ ++L+ + +++ VIG R L + + AE+ T L L
Sbjct: 72 AEVDALMRLMATYLENETARCVQQGVRLEVIGRRDRLGAGLCAAIGRAEEATAGGRRLRL 131
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A +YS RD I A + + + S D + + P DL+IRTGGE+
Sbjct: 132 RMAVDYSGRDAILTAARGVRE-------LSRDA--------FEVAMGPAVDLLIRTGGER 176
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RLSDFLLW+ AY+E VF WPDF A+ ++ R+RRFG
Sbjct: 177 RLSDFLLWESAYAELVFTRTMWPDFGAVDLAAAVQEFQGRERRFG 221
>gi|293394708|ref|ZP_06639000.1| undecaprenyl diphosphate synthase [Serratia odorifera DSM 4582]
gi|291422834|gb|EFE96071.1| undecaprenyl diphosphate synthase [Serratia odorifera DSM 4582]
Length = 252
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 138/233 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R GH+ G++ V+ AA + LT++AFS NW R
Sbjct: 16 PRHVAIIMDGNGRWAKRQGKLRVFGHKAGVKSVRRAVSFAASHHLDALTLYAFSSENWNR 75
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L L SL K+N+++RVIG+ + ++ +E T N GL
Sbjct: 76 PAQEVSALMELFVRALDSEVKSLHKHNVRLRVIGDVSRFSARLQERIRRSEQLTENNDGL 135
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I + +K + + ++ G + ++ L+++ + S++ DL+IRTGG
Sbjct: 136 TLNIAANYGGRWDIIQGVKRLAERVQEGLLRPDQINEELLSEQVCMSELTPVDLVIRTGG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
E R+S+FLLWQ+AY+E F WPDF +F ALN + R+RRFGG + G
Sbjct: 196 EHRISNFLLWQIAYAELYFTDVLWPDFDELVFEGALNAFAQRERRFGGTTPIG 248
>gi|170738812|ref|YP_001767467.1| undecaprenyl pyrophosphate synthase [Methylobacterium sp. 4-46]
gi|168193086|gb|ACA15033.1| undecaprenyl diphosphate synthase [Methylobacterium sp. 4-46]
Length = 238
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 94/228 (41%), Positives = 129/228 (56%), Gaps = 7/228 (3%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ +IMDGNGRWA ARGLPR AGHR G+E + AA ++G+ LT+FAFS +NWRRP
Sbjct: 12 HVAMIMDGNGRWATARGLPRSAGHRAGVEAIRRVAEAAPDLGVGTLTLFAFSSDNWRRPP 71
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+E++ L+ L++ +L++ L + ++ VIG R L + L AE +T L+L
Sbjct: 72 AEVAALMGLLRRYLRRETERLARTGTRLTVIGRRDRLPAGLPGALARAEAETAGGARLHL 131
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA +YS+ I +S + VPD DL+IR+GGEK
Sbjct: 132 RIAVDYSA-------RDAILAAAAGAPGADVGAESREAFGRRLSGGVPDVDLMIRSGGEK 184
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RLSDFLLW+ AY+E F WPDF + AL + R+RRFGGL
Sbjct: 185 RLSDFLLWECAYAELHFTDRMWPDFGGDDLAAALRDFTRRERRFGGLG 232
>gi|223040142|ref|ZP_03610422.1| undecaprenyl pyrophosphate synthetase (UPP
synthetase)(Di-trans,poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphatesynthase) (UDS) [Campylobacter
rectus RM3267]
gi|222878619|gb|EEF13720.1| undecaprenyl pyrophosphate synthetase (UPP
synthetase)(Di-trans,poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphatesynthase) (UDS) [Campylobacter
rectus RM3267]
Length = 233
Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/230 (41%), Positives = 137/230 (59%), Gaps = 3/230 (1%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+H+ IIMDGNGRWA +RGL R GH G V ++ + G+ L+++AFS NW+RP
Sbjct: 5 NHLAIIMDGNGRWAKSRGLLRTKGHETGANVVEQMCEFCIDEGVAVLSLYAFSTENWKRP 64
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE++ L++L+ FL S KN IK VIG+ L D + + + ++ T N+ L
Sbjct: 65 KSEVAFLMELLHKFLLSKRESFIKNGIKFNVIGDESPLSDKLKNEITDIKNATAQNSRLK 124
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS-DVPDP-DLIIRTG 189
L +A NY ++DEI RA + F G + ++ +L L D P P DL++RTG
Sbjct: 125 LNLALNYGAKDEILRAFRR-FCKKNGGEFDTQNLALNLSEDSLQGCLDEPAPIDLLVRTG 183
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE+RLS+F+LWQ +Y+EF F P WPDF+RE ++ +DRRFGGL
Sbjct: 184 GEQRLSNFMLWQASYAEFAFTPTLWPDFTREELARITAKFKKKDRRFGGL 233
>gi|323359851|ref|YP_004226247.1| undecaprenyl pyrophosphate synthase [Microbacterium testaceum
StLB037]
gi|323276222|dbj|BAJ76367.1| undecaprenyl pyrophosphate synthase [Microbacterium testaceum
StLB037]
Length = 267
Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 92/228 (40%), Positives = 132/228 (57%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ I+MDGNGRWA +GL R GHR G ++VA A + G+K+L+++AFS NW R
Sbjct: 33 PEHVAIVMDGNGRWANRQGLTRVEGHRAGEAALLDVVAGAIQAGVKHLSVYAFSTENWSR 92
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + L + L + +++R G + L ++ L+ AE T N+ L
Sbjct: 93 SPDEVRFLMGFNREVLHRRRDQLNEWGVRIRWSGRKPRLWGSVIKELQHAERLTEGNSTL 152
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R EI A++ I DI +G + V LI K L D+PD DL +R+ G
Sbjct: 153 TLTMCVNYGGRVEIVDAMRRIGDDIAAGKLKPSAVTEKLIRKNLYQPDMPDVDLFVRSSG 212
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S+FLLW+ AY+E VF+ WPDF R + A+ Y RDRRFGG
Sbjct: 213 EQRTSNFLLWESAYAEMVFLDTLWPDFRRTHLWDAIGLYLSRDRRFGG 260
>gi|311280857|ref|YP_003943088.1| undecaprenyl diphosphate synthase [Enterobacter cloacae SCF1]
gi|308750052|gb|ADO49804.1| undecaprenyl diphosphate synthase [Enterobacter cloacae SCF1]
Length = 252
Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 139/231 (60%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA +G R GH+ G + V+ AA GI LT++AFS NW RP
Sbjct: 19 HVAIIMDGNGRWAKRQGKIRAFGHKAGAKSVRRAVSFAANNGISALTLYAFSSENWNRPE 78
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+S L++L L SL ++N+++R+IG+ + I ++++E T+ NTGL L
Sbjct: 79 QEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNARIQERIRKSEALTQNNTGLTL 138
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA NY R +I + ++ + + ++ G + + + L+++ + ++ DL+IRTGGE
Sbjct: 139 NIAANYGGRWDIIQGVQQLAEQVQKGELSPNQITEDLLSQQICMHELAPVDLVIRTGGEH 198
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
R+S+FLLWQ+AY+E F WPDF + F AL+ + R+RRFGG G
Sbjct: 199 RISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALHAFANRERRFGGTEPGG 249
>gi|148284145|ref|YP_001248235.1| undecaprenyl pyrophosphate synthetase [Orientia tsutsugamushi str.
Boryong]
gi|146739584|emb|CAM79334.1| undecaprenyl pyrophosphate synthetase [Orientia tsutsugamushi str.
Boryong]
Length = 231
Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/230 (43%), Positives = 143/230 (62%), Gaps = 5/230 (2%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGN RWA A L G+ KG+EV ++V A + I++LT+FAFS+ NW+R
Sbjct: 5 HLAIIMDGNLRWAVANELTMFDGYNKGVEVAKKVVDCAIKNKIQHLTLFAFSMENWKRSQ 64
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
EI+ L L++S+L+ + +K VIGN L+ ++ V+KE E+ T N+ LNL
Sbjct: 65 LEINYLQALMQSYLESDARNYCDYGVKFTVIGNTTKLNFELQKVIKEVEELTINNSVLNL 124
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+IAF+YS R EI A K I S ++ + ++ +YL + +PD DL+IRT GE+
Sbjct: 125 YIAFSYSGRSEIIDAYKRII----SSNIKAEELTEQEFRRYLYSPTMPDIDLLIRTSGEQ 180
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
R+S+FLLW +AYSE FI +YWPDF F AL Y LR +R GLS+K
Sbjct: 181 RISNFLLWHLAYSELYFIDKYWPDFDEADFNIALEDY-LRRKRTFGLSRK 229
>gi|62738380|pdb|1X08|A Chain A, Crystal Structure Of D26a Mutant Upps In Complex With Mg,
Ipp And Fspp
gi|62738381|pdb|1X09|A Chain A, Crystal Structure Of The D26a Mutant Upps In Complex With
Magnesium And Isopentenyl Pyrophosphate
Length = 253
Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 88/226 (38%), Positives = 138/226 (61%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIM GNGRWA +G R GH+ G + V+ AA GI+ LT++AFS NW RP
Sbjct: 20 HVAIIMAGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPA 79
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+S L++L L SL ++N+++R+IG+ + + ++++E T NTGL L
Sbjct: 80 QEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTL 139
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA NY R +I + ++ + + ++ G++ +D ++ +++ ++ DL+IRTGGE
Sbjct: 140 NIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGEH 199
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R+S+FLLWQ+AY+E F WPDF + F ALN + R+RRFGG
Sbjct: 200 RISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGG 245
>gi|52425982|ref|YP_089119.1| UppS protein [Mannheimia succiniciproducens MBEL55E]
gi|52308034|gb|AAU38534.1| UppS protein [Mannheimia succiniciproducens MBEL55E]
Length = 238
Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 92/227 (40%), Positives = 131/227 (57%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA +G R GH+ G+ V+ A ++G++ LT++AFS NW R
Sbjct: 10 PKHIAIIMDGNGRWAKQQGKMRIFGHKSGVRAVRRSVSYACQIGVQALTLYAFSSENWNR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L L L KNNIK++V+G+ + + AE T N L
Sbjct: 70 PEQEVNALMTLFMQALDLEVKKLHKNNIKLKVLGDISGFSPKLQEKIARAETLTANNDSL 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY +I +A + I Q ++ GS+ ++ L + L T + P DL+IRT G
Sbjct: 130 TLNIAANYGGCWDIVQATRQIAQQVKDGSLTISEITEELFQRNLVTKEQPPVDLLIRTSG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+R+S+FLLWQ+AY+E F WPDF+ + F A+ Y R+RRFG
Sbjct: 190 EQRISNFLLWQIAYAELYFSHVLWPDFNEQEFNRAIYVYQQRERRFG 236
>gi|300724789|ref|YP_003714114.1| undecaprenyl pyrophosphate synthetase [Xenorhabdus nematophila ATCC
19061]
gi|297631331|emb|CBJ92026.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase)
[Xenorhabdus nematophila ATCC 19061]
Length = 251
Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 91/228 (39%), Positives = 136/228 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG R GHR GI+ V+ + + I++LT++AFS NW R
Sbjct: 14 PRHVAIIMDGNGRWAKKRGKLRVFGHRAGIKAVRNTVSFSVKHNIESLTLYAFSSENWNR 73
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L L +L K+N+K+ VIG+ + ++ + + T NTGL
Sbjct: 74 PQQEVSSLMELFVFALDNEVKNLHKHNVKLSVIGDISRFSSRLQERIRRSVELTSGNTGL 133
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R ++ +++K I I++ + ++ + I +++ S D DL+IRTGG
Sbjct: 134 QLNIAANYGGRWDLVQSVKQIADKIKANELAPEEITEATIDDFINLSQQSDVDLVIRTGG 193
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E R+S+FL+WQ+AY+E F WPDF F A+N + R+RRFGG
Sbjct: 194 EHRISNFLIWQIAYAELYFTDILWPDFDETAFEGAINAFAKRERRFGG 241
>gi|332970848|gb|EGK09827.1| undecaprenyl diphosphate synthase [Psychrobacter sp. 1501(2011)]
Length = 256
Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 139/232 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGN R+A A G+ + GH G E + +V VGI+ LT+FAFS NW+R
Sbjct: 20 PKHIAIIMDGNNRYAKAHGMAKGQGHVAGKESLDPLVEYCVAVGIEVLTVFAFSSENWQR 79
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L++L+ + + + ++K NI++R IG+R L ++ + +AE T T +
Sbjct: 80 PADEVALLMRLLSATINEQLPRMRKYNIRLRFIGDRSQLSPELQQQMADAEADTAGFTAM 139
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA +Y + +I+ A + + + IE G + + + + + + +DV D D++IRTGG
Sbjct: 140 TLVIAISYGGQWDIANAARQLAKKIEQGEMTAEQLTVETLGQQVQLADVADVDMLIRTGG 199
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ AY+E F WPDF+ + + +++ R RRFG S++
Sbjct: 200 EYRISNFLLWQSAYAELFFTDTLWPDFAAKELNEMMFEFSRRQRRFGKTSEQ 251
>gi|86749805|ref|YP_486301.1| undecaprenyl diphosphate synthase [Rhodopseudomonas palustris HaA2]
gi|86572833|gb|ABD07390.1| Undecaprenyl pyrophosphate synthetase [Rhodopseudomonas palustris
HaA2]
Length = 239
Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/229 (45%), Positives = 135/229 (58%), Gaps = 12/229 (5%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+GIIMDGNGRWA RGL R GH+ G+E ++ AA E GI LT+FAFS +NWRRP
Sbjct: 10 HVGIIMDGNGRWATRRGLSRLRGHQAGVEAIRRVMEAAPEQGIGTLTLFAFSSDNWRRPR 69
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
SE+S L+ L +S+L L N I++ +IG R L D + ++ AE T L L
Sbjct: 70 SEVSALMGLFRSYLVNEVKGLVDNGIRLTLIGRRDRLPDGLAETIERAEAATAAGDALAL 129
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSV--CSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
IA +YS+RD I A + +G + CS + S LI S + D DLIIRT G
Sbjct: 130 RIAVDYSARDTIVNAA------VRAGGLQSCSRETFSDLITG----SKLRDVDLIIRTSG 179
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+RLSDFLLW+ AY+E F WPDF A+ ++ R+RRFGGL
Sbjct: 180 ERRLSDFLLWESAYAELYFTDRMWPDFDANDLADAMASFHGRERRFGGL 228
>gi|188583733|ref|YP_001927178.1| undecaprenyl pyrophosphate synthase [Methylobacterium populi BJ001]
gi|179347231|gb|ACB82643.1| undecaprenyl diphosphate synthase [Methylobacterium populi BJ001]
Length = 236
Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 100/233 (42%), Positives = 133/233 (57%), Gaps = 21/233 (9%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H IIMDGNGRWA ARGLPR AGHR G++ ++ AA +GI LT++AFS +NWRRP
Sbjct: 12 HAAIIMDGNGRWARARGLPRGAGHRAGVKAIQQVAEAAPALGIGTLTLYAFSSDNWRRPA 71
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+ L++L++++L+ L ++ ++ VIG R L I + AE T LNL
Sbjct: 72 EEVGGLMRLLRAYLRGETERLARSGTRLTVIGRRDRLPAGIPEAIARAEAATEAGDRLNL 131
Query: 133 FIAFNYSSRDEISRAI-----KNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
IA +YSSRD I A + + +D S ++C D DL+IR
Sbjct: 132 RIAVDYSSRDAILAAAARLGPEGLSRDAMSEALCGPG----------------DVDLLIR 175
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
TGGEKRLSDFLLW+ AY+E F WPDF A+ + RDRRFGGL+
Sbjct: 176 TGGEKRLSDFLLWEAAYAELHFTERMWPDFEAADLAAAVADFAARDRRFGGLN 228
>gi|23464727|ref|NP_695330.1| undecaprenyl pyrophosphate synthase [Bifidobacterium longum
NCC2705]
gi|227546837|ref|ZP_03976886.1| undecaprenyl pyrophosphate synthetase [Bifidobacterium longum
subsp. infantis ATCC 55813]
gi|239620814|ref|ZP_04663845.1| undecaprenyl pyrophosphate synthetase [Bifidobacterium longum
subsp. infantis CCUG 52486]
gi|42559823|sp|Q8G7Y3|UPPS_BIFLO RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|23325294|gb|AAN23966.1| undecaprenyl pyrophosphate synthetase [Bifidobacterium longum
NCC2705]
gi|227212799|gb|EEI80680.1| undecaprenyl pyrophosphate synthetase [Bifidobacterium longum
subsp. infantis ATCC 55813]
gi|239516390|gb|EEQ56257.1| undecaprenyl pyrophosphate synthetase [Bifidobacterium longum
subsp. infantis CCUG 52486]
Length = 264
Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 85/229 (37%), Positives = 136/229 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+IMDGNGRWA RG+ R GH+ V + +A A E G++ L+++ FS NW+R
Sbjct: 35 PRHIGVIMDGNGRWAKQRGMVRTNGHQAAEPVVFDTIAGAIEAGVRYLSLYTFSTENWKR 94
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + + + + + ++VR G R L ++ L+ AE++T+ N +
Sbjct: 95 SPQEVRFLMGFSREIIHRRVEQMDEWGVRVRWSGRRPKLWKSVIDELEAAEERTKNNKVI 154
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
++ NY R EI+ A I +++ G + V +IA +L D+PD DL+IRT G
Sbjct: 155 DVVFCINYGGRAEIADACAAIAREVRDGKISGDRVTEKMIADHLYNPDIPDCDLVIRTSG 214
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+R S+FL W+ AY+E F+PE +PD R++ + +++ Y RDRRFGG+
Sbjct: 215 EQRTSNFLPWEAAYAELDFVPELFPDCGRDVLWRSIDHYIHRDRRFGGV 263
>gi|46190603|ref|ZP_00121247.2| COG0020: Undecaprenyl pyrophosphate synthase [Bifidobacterium
longum DJO10A]
gi|189438982|ref|YP_001954063.1| undecaprenyl pyrophosphate synthase [Bifidobacterium longum DJO10A]
gi|312132422|ref|YP_003999761.1| upps [Bifidobacterium longum subsp. longum BBMN68]
gi|317481605|ref|ZP_07940641.1| di-trans,poly-cis-decaprenylcistransferase [Bifidobacterium sp.
12_1_47BFAA]
gi|322689573|ref|YP_004209307.1| undecaprenyl pyrophosphate synthase [Bifidobacterium longum subsp.
infantis 157F]
gi|322691534|ref|YP_004221104.1| undecaprenyl pyrophosphate synthase [Bifidobacterium longum subsp.
longum JCM 1217]
gi|189427417|gb|ACD97565.1| Undecaprenyl pyrophosphate synthase [Bifidobacterium longum DJO10A]
gi|291516145|emb|CBK69761.1| Undecaprenyl pyrophosphate synthetase [Bifidobacterium longum
subsp. longum F8]
gi|311772916|gb|ADQ02404.1| UppS [Bifidobacterium longum subsp. longum BBMN68]
gi|316916965|gb|EFV38351.1| di-trans,poly-cis-decaprenylcistransferase [Bifidobacterium sp.
12_1_47BFAA]
gi|320456390|dbj|BAJ67012.1| undecaprenyl pyrophosphate synthase [Bifidobacterium longum subsp.
longum JCM 1217]
gi|320460909|dbj|BAJ71529.1| undecaprenyl pyrophosphate synthase [Bifidobacterium longum subsp.
infantis 157F]
Length = 262
Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 85/229 (37%), Positives = 136/229 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+IMDGNGRWA RG+ R GH+ V + +A A E G++ L+++ FS NW+R
Sbjct: 33 PRHIGVIMDGNGRWAKQRGMVRTNGHQAAEPVVFDTIAGAIEAGVRYLSLYTFSTENWKR 92
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + + + + + ++VR G R L ++ L+ AE++T+ N +
Sbjct: 93 SPQEVRFLMGFSREIIHRRVEQMDEWGVRVRWSGRRPKLWKSVIDELEAAEERTKNNKVI 152
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
++ NY R EI+ A I +++ G + V +IA +L D+PD DL+IRT G
Sbjct: 153 DVVFCINYGGRAEIADACAAIAREVRDGKISGDRVTEKMIADHLYNPDIPDCDLVIRTSG 212
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+R S+FL W+ AY+E F+PE +PD R++ + +++ Y RDRRFGG+
Sbjct: 213 EQRTSNFLPWEAAYAELDFVPELFPDCGRDVLWRSIDHYIHRDRRFGGV 261
>gi|254797263|ref|YP_003082105.1| undecaprenyl diphosphate synthase [Neorickettsia risticii str.
Illinois]
gi|254590503|gb|ACT69865.1| undecaprenyl diphosphate synthase [Neorickettsia risticii str.
Illinois]
Length = 230
Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 97/233 (41%), Positives = 128/233 (54%), Gaps = 4/233 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M+ P HI IIMDGN RWA ARGL G++ G+E V A+ GI LT+F FS
Sbjct: 1 MIGKELPVHIAIIMDGNARWARARGLCNSDGYKMGVEAAFSAVRASCNAGIPYLTLFLFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW R ++ + + + L NIKV+VIG RL L V+K E T
Sbjct: 61 TENWSRNPDDVRLVFSIFEKASVTALNELCDANIKVKVIGERLGLGKSARQVIKNLESGT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N+G+ L +A NY R EI A+ + D + + +VD +A YL T +PDPDL
Sbjct: 121 AKNSGMYLCLAINYGGRSEIINAVSRMIND----GLRAEEVDVQKLASYLYTDGIPDPDL 176
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IIRT GEKRLS+FLLWQ +YSE F WPDF+ + A+ Y +R R++G
Sbjct: 177 IIRTAGEKRLSNFLLWQSSYSELYFCDTLWPDFTEKDLEMAMEAYKVRCRKYG 229
>gi|300087326|ref|YP_003757848.1| undecaprenyl diphosphate synthase [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299527059|gb|ADJ25527.1| undecaprenyl diphosphate synthase [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 236
Score = 182 bits (461), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 95/239 (39%), Positives = 132/239 (55%), Gaps = 4/239 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + +PP H+ IIMDGNGRWA +G R GHR G+ E++ A + G+ +T+
Sbjct: 1 MHQELEPVAPPCHVAIIMDGNGRWALRQGWERLEGHRAGLNNIPEVIRAFTDAGVGYITL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
F+FS NW+RP E+ L+ L+ L K L NNI +R +G L + ++
Sbjct: 61 FSFSTENWKRPAGEVRGLLSLLAEALGKMSQELDDNNIVLRHLGRLDRLPYQLRHKVRRV 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+QT NTG + AF+Y SR E+ A + + V + +D + L +S +P
Sbjct: 121 MEQTAGNTGAVVSFAFDYGSRAELVEAARQALKQ----KVAADTLDEKTFSGLLSSSGLP 176
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
D DL+IRTGGE+RLS+FLLWQ AY+E F WPDF + AL Y R RRFGGL
Sbjct: 177 DVDLLIRTGGERRLSNFLLWQSAYAELYFSDTLWPDFKEDEINRALADYAGRHRRFGGL 235
>gi|315230449|ref|YP_004070885.1| undecaprenyl pyrophosphate synthetase [Thermococcus barophilus MP]
gi|315183477|gb|ADT83662.1| undecaprenyl pyrophosphate synthetase [Thermococcus barophilus MP]
Length = 266
Score = 182 bits (461), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 96/229 (41%), Positives = 136/229 (59%), Gaps = 2/229 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGN RWA P GH G + EI+ E+ IK LT++AFS N++R
Sbjct: 37 PKHVAIIMDGNRRWARKLEKPPWYGHLFGSKKLEEILEWCRELNIKTLTVYAFSTENFKR 96
Query: 71 PVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
E++ L+ L + K+ + + K I+V VIG R L +++ +EAE TR +
Sbjct: 97 SPEEVNALMNLFEQKFKELVHDERVHKYGIRVNVIGRRELLPENVRKAAEEAERATRKYS 156
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
L IA Y R EI AIK I DIE G++ D+D L+ KYL ++PDPD++IRT
Sbjct: 157 NYILNIALAYGGRSEIVDAIKRIVADIEDGNITKKDIDEELLKKYLYIPNMPDPDIVIRT 216
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
GGE R+S+FLL+Q+AYSE F+ Y+P+F + F + +Y R+RRFG
Sbjct: 217 GGEIRISNFLLYQIAYSELFFVDVYFPEFRKIDFLRIIREYQKRERRFG 265
>gi|333027248|ref|ZP_08455312.1| putative undecaprenyl diphosphate synthase [Streptomyces sp.
Tu6071]
gi|332747100|gb|EGJ77541.1| putative undecaprenyl diphosphate synthase [Streptomyces sp.
Tu6071]
Length = 280
Score = 182 bits (461), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 86/228 (37%), Positives = 131/228 (57%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ ++MDGNGRWA RGLPR GH+ G V + + E+GIKN++++AFS NW+R
Sbjct: 35 PGHVAVVMDGNGRWAKERGLPRTEGHKVGETVVMDAMKGCLELGIKNISLYAFSTENWKR 94
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + + + + + I++R +G L ++ L+ A++QT+ N L
Sbjct: 95 SPEEVRFLMNFNRDVIARRRDEMDELGIRIRWVGRMPKLWKSVVKELQIAQEQTKDNDAL 154
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L+ NY R EI+ A + + +D+ +G + V YL D+PD DL +R G
Sbjct: 155 TLYFCVNYGGRAEIADAARRLAEDVAAGRLDPSKVSEKTFQNYLYYPDMPDVDLFLRPSG 214
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S+FLLWQ +Y+E V+ WPDF R + A +Y RDRRFGG
Sbjct: 215 EQRTSNFLLWQSSYAEMVYQDVLWPDFDRRDLWRACVEYAKRDRRFGG 262
>gi|119026172|ref|YP_910017.1| undecaprenyl pyrophosphate synthase [Bifidobacterium adolescentis
ATCC 15703]
gi|154488979|ref|ZP_02029828.1| hypothetical protein BIFADO_02288 [Bifidobacterium adolescentis
L2-32]
gi|118765756|dbj|BAF39935.1| undecaprenyl pyrophosphate synthetase [Bifidobacterium adolescentis
ATCC 15703]
gi|154083116|gb|EDN82161.1| hypothetical protein BIFADO_02288 [Bifidobacterium adolescentis
L2-32]
Length = 263
Score = 182 bits (461), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 138/231 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+G+IMDGNGRWA RGL R GH+ V + +A A E G++ L+++ FS NW+R
Sbjct: 33 PRHVGVIMDGNGRWAQQRGLIRTDGHQAAEPVVFDTIAGAIEAGVRYLSLYTFSTENWKR 92
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + + + + + ++VR G R L ++ L+ A+++T+ N +
Sbjct: 93 SPQEVRFLMGFSRDIIHRRVDQMNEWGVRVRWSGRRPKLWKSVIDELEVAQEKTKNNKTI 152
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
++ NY R EI+ A I +++ G + V +IA++L D+PD DL+IRT G
Sbjct: 153 DVVFCLNYGGRAEIADACAAIAREVRDGKISGDRVTEKMIAEHLYNPDIPDCDLVIRTSG 212
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E+R S+FL W+ AY+E F+PE +PD R++ + +++ Y RDRRFGG+ +
Sbjct: 213 EQRTSNFLPWEAAYAELDFVPELFPDCGRDVLWRSIDHYIHRDRRFGGVKR 263
>gi|218679111|ref|ZP_03527008.1| undecaprenyl diphosphate synthase [Rhizobium etli CIAT 894]
Length = 157
Score = 182 bits (461), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 82/148 (55%), Positives = 111/148 (75%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA RGLPR GHRKG+E E V AA GIK LT+FAFS NWRR
Sbjct: 10 PEHVAIIMDGNGRWAKQRGLPRTMGHRKGVEAVRETVRAAGAAGIKYLTLFAFSSENWRR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+S+L+ L+K+F+++ L + N++++VIG+R SL DIL +L EAE+ T+ NT L
Sbjct: 70 PEAEVSDLLGLLKAFIRRDLAELHRQNVRIKVIGDRHSLRSDILGLLLEAEETTKDNTAL 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESG 158
L IAFNY SRDEISRA+ ++ +D+++G
Sbjct: 130 TLVIAFNYGSRDEISRAVVSLARDVKAG 157
>gi|148244196|ref|YP_001218890.1| undecaprenyl diphosphate synthase [Candidatus Vesicomyosocius
okutanii HA]
gi|146326023|dbj|BAF61166.1| undecaprenyl diphosphate synthase [Candidatus Vesicomyosocius
okutanii HA]
Length = 233
Score = 182 bits (461), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 95/229 (41%), Positives = 137/229 (59%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S HI IIMDGNGRWA+ R LPR GH++GI+ +V A + IK LT+FAFS N
Sbjct: 2 STLKHIAIIMDGNGRWASKRSLPRILGHQQGIQAVRNVVKACSIRSIKTLTLFAFSSENK 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
R E+S L KL L++ L K+NIK+++IG+ I V + + NT
Sbjct: 62 NRSTKEVSLLFKLFLDMLQQEVKKLNKHNIKLKIIGDMSLFPIKIQQVAIDTQAILASNT 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL L IA NY + +I++A + +G + ++D++ ++YL ++ P+ DL+IRT
Sbjct: 122 GLTLIIAANYGGQWDITQAAIKAAKVAVAGDIKANDINVKNFSQYLSLANEPNVDLLIRT 181
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
GE R+S+FLLW +AYSEF F WPDF++ A+N +N R+RRFG
Sbjct: 182 SGELRISNFLLWDIAYSEFYFTKTLWPDFNKSELEKAINSFNNRNRRFG 230
>gi|302518923|ref|ZP_07271265.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. SPB78]
gi|318059907|ref|ZP_07978630.1| undecaprenyl pyrophosphate synthase [Streptomyces sp. SA3_actG]
gi|318076740|ref|ZP_07984072.1| undecaprenyl pyrophosphate synthase [Streptomyces sp. SA3_actF]
gi|302427818|gb|EFK99633.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. SPB78]
Length = 280
Score = 182 bits (461), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 86/228 (37%), Positives = 131/228 (57%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ ++MDGNGRWA RGLPR GH+ G V + + E+GIKN++++AFS NW+R
Sbjct: 35 PGHVAVVMDGNGRWAKERGLPRTEGHKVGETVVMDAMKGCLELGIKNISLYAFSTENWKR 94
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + + + + + I++R +G L ++ L+ A++QT+ N L
Sbjct: 95 SPEEVRFLMNFNRDVIARRRDEMDELGIRIRWVGRMPKLWKSVVKELQIAQEQTKDNDAL 154
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L+ NY R EI+ A + + +D+ +G + V YL D+PD DL +R G
Sbjct: 155 TLYFCVNYGGRAEIADAARRLAEDVAAGRLDPSKVSEKTFQDYLYYPDMPDVDLFLRPSG 214
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S+FLLWQ +Y+E V+ WPDF R + A +Y RDRRFGG
Sbjct: 215 EQRTSNFLLWQSSYAEMVYQDVLWPDFDRRDLWRACVEYAKRDRRFGG 262
>gi|240140880|ref|YP_002965360.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase)
[Methylobacterium extorquens AM1]
gi|254563390|ref|YP_003070485.1| undecaprenyl pyrophosphate synthetase [Methylobacterium extorquens
DM4]
gi|240010857|gb|ACS42083.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase)
[Methylobacterium extorquens AM1]
gi|254270668|emb|CAX26672.1| undecaprenyl pyrophosphate synthetase (di-trans,
poly-cis-decaprenylcistransferase) [Methylobacterium
extorquens DM4]
Length = 220
Score = 182 bits (461), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 95/223 (42%), Positives = 130/223 (58%), Gaps = 11/223 (4%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA+ARGLPR AGHR G++ + AA +GI LT++AFS +NWRRP E+
Sbjct: 1 MDGNGRWASARGLPRGAGHRAGVKTIQRVAEAAPALGIGTLTLYAFSSDNWRRPAEEVGG 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L++++L+ L ++ ++ VIG R L I ++ AE T L+L IA +
Sbjct: 61 LMRLLRAYLRGETDRLARSGTRLTVIGRRDRLPPGIPEAIERAEAATASGDRLHLRIAVD 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
YSSRD I A + + + + +L A D DL+IRTGGEKRLSDF
Sbjct: 121 YSSRDAILAAAARLGPE----GLSREGLSEALGADG-------DVDLLIRTGGEKRLSDF 169
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LLW+ AY+E F WPDF A+ + RDRRFGGL+
Sbjct: 170 LLWEAAYAELHFTDRMWPDFGATDLAAAVADFTARDRRFGGLN 212
>gi|255322343|ref|ZP_05363489.1| di-trans,poly-cis-decaprenylcistransferase [Campylobacter showae
RM3277]
gi|255300716|gb|EET79987.1| di-trans,poly-cis-decaprenylcistransferase [Campylobacter showae
RM3277]
Length = 233
Score = 181 bits (460), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 139/232 (59%), Gaps = 7/232 (3%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+H+ IIMDGNGRWA RGL R GH G V ++ + G+ L+++AFS NW+RP
Sbjct: 5 NHLAIIMDGNGRWAKRRGLLRTKGHETGANVVEQMCEFCIDEGVAVLSLYAFSTENWKRP 64
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE++ L++L+ FL S KN IK VIGN L D + + + ++ T N+ L
Sbjct: 65 KSEVAFLMELLHKFLLSKHDSFIKNGIKFNVIGNESPLSDKLKNEIADIKNATAQNSRLK 124
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDVPDPDLIIR 187
L +A NY ++DEI RA + F + G + ++ +L + LD S VP DL++R
Sbjct: 125 LNLALNYGAKDEILRAFRR-FCEKNGGEFDAQNLALNLSEDSLQACLDES-VP-IDLLVR 181
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
TGGE+RLS+F+LWQ +Y+EF F P WPDF+RE ++ +DRRFGGL
Sbjct: 182 TGGEQRLSNFMLWQASYAEFAFTPTLWPDFTREELAQITAKFKKKDRRFGGL 233
>gi|189184298|ref|YP_001938083.1| UPP synthetase [Orientia tsutsugamushi str. Ikeda]
gi|189181069|dbj|BAG40849.1| UPP synthetase [Orientia tsutsugamushi str. Ikeda]
Length = 231
Score = 181 bits (460), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 101/230 (43%), Positives = 143/230 (62%), Gaps = 5/230 (2%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGN RWA A L G+ KG+EV ++V A + I++LT+FAFS+ NW R
Sbjct: 5 HLAIIMDGNLRWAMANQLTMFDGYNKGVEVAKKVVDCAIKKKIQHLTLFAFSMENWNRSQ 64
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
EI+ L L++S+L+ + + +K VIG+ L+ ++ V+KE E+ T N+ LNL
Sbjct: 65 LEINYLQALMQSYLESDARNYCEYGVKFTVIGDTTKLNFELQKVIKEVEELTINNSVLNL 124
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+IAF+YS R EI A K I S ++ + ++ KYL + +PD DL+IRT GE+
Sbjct: 125 YIAFSYSGRSEIIDAYKRIV----SSNIKAEELTEQEFRKYLYSPTMPDIDLLIRTSGEQ 180
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
R+S+FLLW +AYSE FI +YWPDF F AL Y LR +R GLS+K
Sbjct: 181 RISNFLLWHLAYSELYFIDKYWPDFDEADFNIALEDY-LRRKRTFGLSRK 229
>gi|62184817|ref|YP_219602.1| putative peptidoglycan synthetasis protein [Chlamydophila abortus
S26/3]
gi|73920257|sp|Q5L6U0|UPPS_CHLAB RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|62147884|emb|CAH63631.1| putative peptidoglycan synthetasis protein [Chlamydophila abortus
S26/3]
Length = 250
Score = 181 bits (460), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 95/239 (39%), Positives = 135/239 (56%), Gaps = 4/239 (1%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRW----AAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNL 58
AS+ S P H+ IIMDGN RW A + +GH G +V I+ +A +GI+ L
Sbjct: 11 ASLSMQSLPKHVAIIMDGNRRWYRQHQAQCSIKSSSGHYYGAKVLPNIIESAFSLGIEVL 70
Query: 59 TIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
T+FAFS N+ R E++EL L + L + L +N I++R IGN L+L D+ +
Sbjct: 71 TLFAFSTENFLRSAEEVAELFSLFHAQLDEQLPYLIENKIRLRCIGNLLALPPDLQQQIA 130
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
+ +T+ + L +A NY +DE+ RA K + D+ + + V LI YLDTS+
Sbjct: 131 KVASETQRHGMRELVLAINYGGKDELVRAFKKLHHDLVNKKISLDSVSEELIRLYLDTSE 190
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+PDPDL+IRTGGE R+S+FLLWQ+AY+E WPDF A+ Y R RR G
Sbjct: 191 IPDPDLLIRTGGEMRVSNFLLWQIAYTELYVTDVLWPDFKPYHLLDAIKAYQHRSRRGG 249
>gi|254819381|ref|ZP_05224382.1| hypothetical protein MintA_05625 [Mycobacterium intracellulare ATCC
13950]
Length = 289
Score = 181 bits (460), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 89/227 (39%), Positives = 134/227 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ I+MDGNGRWA +GL R GHR G V +IV A E+GIK L+++AFS NW+R
Sbjct: 61 PNHVAIVMDGNGRWATQQGLTRTDGHRAGEAVVIDIVCGAIEIGIKWLSLYAFSTENWKR 120
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + ++ +L +K+R +G+R L ++ L AED T+ N +
Sbjct: 121 SPEEVRFLMGFNRDVVRMRRVNLNAIGVKIRWVGSRPRLWRSVINELAIAEDMTKDNDVI 180
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ NY R EI+ A K I + +G + + S +A +L D+PD DL +RT G
Sbjct: 181 TVNYCVNYGGRAEIAEATKEIARLAAAGRLNPERITESTVANHLQRPDIPDVDLFLRTSG 240
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+R S+F+LWQ AY+E++F + WPD+ R + A +Y R+RRFG
Sbjct: 241 EQRSSNFMLWQAAYAEYIFQDKLWPDYDRRDLWAACEEYASRNRRFG 287
>gi|271963863|ref|YP_003338059.1| undecaprenyl pyrophosphate synthetase [Streptosporangium roseum DSM
43021]
gi|270507038|gb|ACZ85316.1| undecaprenyl pyrophosphate synthetase [Streptosporangium roseum DSM
43021]
Length = 259
Score = 181 bits (460), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 90/228 (39%), Positives = 128/228 (56%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I+MDGNGRWA RGLPR GH+ G +++ A E+G+ L+ +AFS NW+R
Sbjct: 24 PRHVAIVMDGNGRWAKQRGLPRTEGHKAGEASLFDVIEGAIELGVPYLSAYAFSTENWKR 83
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ L ++VR G L ++ L++AE T N+ L
Sbjct: 84 SPDEVRFLMGFNRDVIRRRRDDLHAMGVRVRWAGRPGRLWKSVIQELQDAERMTERNSTL 143
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L NY R EI A + QDI +G V V A+YLD ++PD DL +R+ G
Sbjct: 144 TLQFCVNYGGRAEIVDAALRLAQDIAAGRVRPGRVKEETFARYLDEPEIPDVDLFLRSSG 203
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S+FL+WQ AY+E VF+ WPDF R + A Y RDRR+GG
Sbjct: 204 EQRTSNFLIWQTAYAEMVFLNRLWPDFDRRDLWEACETYAKRDRRYGG 251
>gi|146343873|ref|YP_001208921.1| undecaprenyl pyrophosphate synthase [Bradyrhizobium sp. ORS278]
gi|146196679|emb|CAL80706.1| Undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans,poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS)
[Bradyrhizobium sp. ORS278]
Length = 246
Score = 181 bits (460), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 104/243 (42%), Positives = 137/243 (56%), Gaps = 11/243 (4%)
Query: 1 MVASMMSSSPPD----HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIK 56
M +S+ SP H+GIIMDGNGRWA +G+ R GH G+E IV AA + GI
Sbjct: 1 MQSSLQPKSPAVVDGLHVGIIMDGNGRWATRKGMSRLRGHEAGVEAIRRIVEAAPDQGIG 60
Query: 57 NLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCV 116
LT++AFS +NWRRP +E++ L+ L++ +L SL +N +++ VIG R L I
Sbjct: 61 TLTLYAFSSDNWRRPRAEVAALMALLRVYLASEVESLVRNGVRLNVIGRRDRLPGGIADA 120
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT 176
+ AE TR L+L IA +YS+RD AI N S + S L+
Sbjct: 121 IARAEQATRDGRTLHLRIAVDYSARD----AILNAAAKAGSIEGLTRQTFSDLVTGEAGL 176
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
DV DLIIRT GE+RLSDFLLW+ AY+E F WPDF AL ++ R+RRF
Sbjct: 177 RDV---DLIIRTSGEQRLSDFLLWEGAYAELHFTDRMWPDFDAADLAEALASFHGRERRF 233
Query: 237 GGL 239
GGL
Sbjct: 234 GGL 236
>gi|332160597|ref|YP_004297174.1| undecaprenyl pyrophosphate synthetase [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
gi|318606925|emb|CBY28423.1| undecaprenyl pyrophosphate synthetase [Yersinia enterocolitica
subsp. palearctica Y11]
gi|325664827|gb|ADZ41471.1| undecaprenyl pyrophosphate synthetase [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
gi|330859604|emb|CBX69944.1| undecaprenyl pyrophosphate synthetase [Yersinia enterocolitica
W22703]
Length = 252
Score = 181 bits (460), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 89/235 (37%), Positives = 138/235 (58%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+S P H+ IIMDGNGRWA +G R GH+ G++ V+ AA + LT++AFS
Sbjct: 11 LSPLTPRHVAIIMDGNGRWAKKQGKLRVFGHKAGVKSVRRAVSFAATHQLDALTLYAFSS 70
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E++ L++L L SL K+N+++ VIG+ + + ++ +E+ T
Sbjct: 71 ENWNRPAQEVTALMELFVRALDSEVKSLHKHNVRLSVIGDISRFSERLQQRIRRSEELTA 130
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N GL L IA NY R +I + ++++ + ++ G + D+ + Y+ + + DL+
Sbjct: 131 NNYGLKLNIAANYGGRWDIIQGVRHLAEQVQRGELQPKDICEESLNSYICLHEQSEVDLV 190
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IRTGGE R+S+FLLWQ+AY+E F WPDF +F ALN + R+RRFGG +
Sbjct: 191 IRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEHVFEGALNAFAQRERRFGGTT 245
>gi|123443480|ref|YP_001007453.1| undecaprenyl pyrophosphate synthase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122090441|emb|CAL13309.1| undecaprenyl pyrophosphate synthetase [Yersinia enterocolitica
subsp. enterocolitica 8081]
Length = 252
Score = 181 bits (460), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 89/235 (37%), Positives = 138/235 (58%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+S P H+ IIMDGNGRWA +G R GH+ G++ V+ AA + LT++AFS
Sbjct: 11 LSPLTPRHVAIIMDGNGRWAKKQGKLRVFGHKAGVKSVRRAVSFAATHQLDALTLYAFSS 70
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E++ L++L L SL K+N+++ VIG+ + + ++ +E+ T
Sbjct: 71 ENWNRPAQEVTALMELFVRALDSEVKSLHKHNVRLSVIGDISRFSERLQQRIRRSEELTA 130
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N GL L IA NY R +I + ++++ + ++ G + D+ + Y+ + + DL+
Sbjct: 131 NNDGLKLNIAANYGGRWDIIQGVRHLAEQVQRGELQPKDICEESLNSYICLHEQSEVDLV 190
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IRTGGE R+S+FLLWQ+AY+E F WPDF +F ALN + R+RRFGG +
Sbjct: 191 IRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEHVFEGALNAFAQRERRFGGTT 245
>gi|18424144|ref|NP_568882.1| dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase,
putative [Arabidopsis thaliana]
gi|75247639|sp|Q8RX73|DDPS3_ARATH RecName: Full=Dehydrodolichyl diphosphate synthase 3;
Short=Dedol-PP synthase 3
gi|19699277|gb|AAL91250.1| AT5g58780/mzn1_230 [Arabidopsis thaliana]
gi|28416467|gb|AAO42764.1| At5g58780/mzn1_230 [Arabidopsis thaliana]
gi|332009714|gb|AED97097.1| dehydrodolichyl diphosphate synthase 3 [Arabidopsis thaliana]
Length = 302
Score = 181 bits (460), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 93/238 (39%), Positives = 134/238 (56%), Gaps = 2/238 (0%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
V + P H+ +IMDGN RWA GL GH G + E ++GI ++ F
Sbjct: 62 VEELQRELMPRHVAVIMDGNRRWAKRAGLLTSQGHEAGAKRLIEFSELCFKLGIHTVSAF 121
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW R E+ L+ LI+ +LK ++ +V VIGN + + +L ++E E
Sbjct: 122 AFSTENWGRHKIEVKCLMSLIQHYLKSKIQYFQREETRVSVIGNLTKIPESLLRTVQEIE 181
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT--SDV 179
+ TR +L +A +YS R +I RA K+I + E G + DVD +LI + L T ++
Sbjct: 182 EATRSYKKKHLILAIDYSGRLDILRACKSIVKKSEKGLIREEDVDEALIERELLTNCTEF 241
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
P PDL+IRT GE+R+S+F LWQ+AY+E F P WPDF ++ AL Y R+RRFG
Sbjct: 242 PSPDLLIRTSGEQRISNFFLWQLAYTELFFSPVLWPDFDKDKLLEALVSYQRRERRFG 299
>gi|213691678|ref|YP_002322264.1| undecaprenyl diphosphate synthase [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|213523139|gb|ACJ51886.1| undecaprenyl diphosphate synthase [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|320457769|dbj|BAJ68390.1| undecaprenyl pyrophosphate synthase [Bifidobacterium longum subsp.
infantis ATCC 15697]
Length = 262
Score = 181 bits (460), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 85/229 (37%), Positives = 136/229 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+IMDGNGRWA RG+ R GH+ V + +A A E G++ L+++ FS NW+R
Sbjct: 33 PRHIGVIMDGNGRWAKQRGMIRTNGHQAAEPVVFDTIAGAIEAGVRYLSLYTFSTENWKR 92
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + + + + + ++VR G R L ++ L+ AE++T+ N +
Sbjct: 93 SPQEVRFLMGFSREIIHRRVEQMDEWGVRVRWSGRRPKLWKSVIDELEAAEERTKNNKVI 152
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
++ NY R EI+ A I +++ G + V +IA +L D+PD DL+IRT G
Sbjct: 153 DVVFCINYGGRAEIADACAAIAREVRDGKISGDRVTEKMIADHLYNPDIPDCDLVIRTSG 212
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+R S+FL W+ AY+E F+PE +PD R++ + +++ Y RDRRFGG+
Sbjct: 213 EQRTSNFLPWEAAYAELDFVPELFPDCGRDVLWRSIDHYIHRDRRFGGV 261
>gi|315604781|ref|ZP_07879841.1| undecaprenyl diphosphate synthase [Actinomyces sp. oral taxon 180
str. F0310]
gi|315313510|gb|EFU61567.1| undecaprenyl diphosphate synthase [Actinomyces sp. oral taxon 180
str. F0310]
Length = 274
Score = 181 bits (460), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 85/228 (37%), Positives = 135/228 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA RGL R GHR G + +A A + G++ L+++ FS NW+R
Sbjct: 39 PAHVALIMDGNGRWANGRGLGRTEGHRAGEYALMDTIAGAIDAGVRYLSVYTFSTENWKR 98
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
+E+S ++ L + L + + VR G R L ++ L++A+ T + L
Sbjct: 99 SPAEVSFIMNYASDVLARRTDQLAQWGVHVRWSGRRPRLWRSVINALEKADRATSHCSTL 158
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L + NY R E++ A ++I + + +G + V +A++L DVPD DL+IRT G
Sbjct: 159 DLIMCVNYGGRAELADAARSIAEGVAAGRLSPRGVTEKTLARHLYLPDVPDVDLMIRTSG 218
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R+S++LLWQ+AY+E +F+ WP F RE + L ++ R+RRFGG
Sbjct: 219 EQRISNYLLWQMAYAEMMFVDTPWPAFDREELWGCLEEFAGRERRFGG 266
>gi|124026194|ref|YP_001015310.1| undecaprenyl pyrophosphate synthetase [Prochlorococcus marinus str.
NATL1A]
gi|123961262|gb|ABM76045.1| Undecaprenyl pyrophosphate synthetase (UPPS) [Prochlorococcus
marinus str. NATL1A]
Length = 256
Score = 181 bits (460), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 90/229 (39%), Positives = 134/229 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI +IMDGNGRWA +GLPR GH G+E + + GI LT++AFS NW R
Sbjct: 28 PEHIAVIMDGNGRWAKEKGLPRTIGHTAGVEALKTTLHLCSNWGIGALTVYAFSTENWSR 87
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L +S LK+ +LK +K+ +G+ L + ++KE+ + T + G+
Sbjct: 88 PSEEVNFLMTLFESVLKRELTNLKLEEVKINFMGDLDPLPIGLKDLIKESVESTSNSKGI 147
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ + NY R E+ RA + + + G + +D ++ A L T+ DPDL+IRT G
Sbjct: 148 HFNVCTNYGGRRELVRAAQKLAERSVKGELDPSLIDENVFASELFTASEVDPDLLIRTSG 207
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
EKR+S+FLLWQ+AY+E WPDF+ + AL Y R RRFGG+
Sbjct: 208 EKRISNFLLWQLAYAEIHITDVLWPDFNADTLTKALLDYQSRRRRFGGV 256
>gi|238021665|ref|ZP_04602091.1| hypothetical protein GCWU000324_01568 [Kingella oralis ATCC 51147]
gi|237866279|gb|EEP67321.1| hypothetical protein GCWU000324_01568 [Kingella oralis ATCC 51147]
Length = 228
Score = 181 bits (460), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 93/225 (41%), Positives = 133/225 (59%), Gaps = 6/225 (2%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA R LPR GH+KG++V I + G++ LT+FAFS NWRRP E+S
Sbjct: 1 MDGNGRWAKKRFLPRAMGHKKGLDVLENICHICNDAGVRYLTVFAFSTENWRRPADEVSF 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ L L+K + + ++++VIG+R +I + +AE T NTGL L IA +
Sbjct: 61 LMGLFLVALQKKVIQMNEKGVRLKVIGDRSRFSAEIQQSIIDAEALTANNTGLTLTIAAD 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I +A + I G + D +A L ++ P+PDL IRTGGE R+S+F
Sbjct: 121 YGGRWDILQAANAL---IAEGKTHISEAD---LASRLMLAEAPEPDLFIRTGGETRISNF 174
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+LWQ+AY+EF F P WPDF++ A + R+RRFG S++
Sbjct: 175 MLWQMAYAEFYFTPVLWPDFNQAEMQKAFASFTQRERRFGRTSEQ 219
>gi|72161257|ref|YP_288914.1| undecaprenyl pyrophosphate synthetase [Thermobifida fusca YX]
gi|71914989|gb|AAZ54891.1| Undecaprenyl pyrophosphate synthetase [Thermobifida fusca YX]
Length = 282
Score = 181 bits (460), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 93/228 (40%), Positives = 135/228 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I+MDGNGRWA RGLPR GH+ G +++ A E+G+ L+ +AFS NW+R
Sbjct: 36 PRHVAIVMDGNGRWAKQRGLPRTEGHKAGESSLFDVIEGALELGVPYLSAYAFSTENWKR 95
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ L ++VR G L ++ L EAE+ T+ NT L
Sbjct: 96 SPDEVRFLMGFNRDVIRRRRDELHARGVRVRWAGRPGRLWKSVIKELTEAEELTKHNTKL 155
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L NY R EI+ A + +D+ +G + + V + +A+YL D+PD DL IR+ G
Sbjct: 156 TLQFCVNYGGRAEIADAAAALARDVAAGRLSPNRVTEATLARYLYHPDIPDVDLFIRSSG 215
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+RLS+FLLWQ +Y+EFVF+ WPDF R F+ A Y RDRR+GG
Sbjct: 216 EQRLSNFLLWQSSYAEFVFLDTLWPDFDRRHFWQACEIYARRDRRYGG 263
>gi|332287131|ref|YP_004422032.1| undecaprenyl pyrophosphate synthase [Chlamydophila psittaci 6BC]
gi|313847727|emb|CBY16717.1| putative peptidoglycan synthetasis protein [Chlamydophila psittaci
RD1]
gi|325507074|gb|ADZ18712.1| undecaprenyl pyrophosphate synthase [Chlamydophila psittaci 6BC]
gi|328914371|gb|AEB55204.1| undecaprenyl diphosphate synthase [Chlamydophila psittaci 6BC]
Length = 250
Score = 181 bits (459), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 95/239 (39%), Positives = 136/239 (56%), Gaps = 4/239 (1%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAAR----GLPRCAGHRKGIEVFNEIVAAAAEVGIKNL 58
AS+ S P H+ IIMDGN RW + R +GH G +V +I+ +A +GI+ L
Sbjct: 11 ASLSMQSLPKHVAIIMDGNRRWYQQHQTQCSVKRSSGHYYGAKVLPKIIESAFSLGIEVL 70
Query: 59 TIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
T+FAFS N+ R E++EL L S L + L +N I++R IGN L+L + +
Sbjct: 71 TLFAFSTENFLRSAEEVAELFSLFHSQLDEQLPYLIENKIRLRCIGNLLALPHYLQKQIS 130
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
+ ++T+ + L +A NY +DE+ RA K + D+ + + V LI YLDTS+
Sbjct: 131 KVAEETQGHGIRELVLAINYGGKDELVRAFKKLHHDLVNKKISLDSVSEELIRLYLDTSE 190
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+PDPDL+IRTGGE R+S+FLLWQ+AY+E WPDF A+ Y R RR G
Sbjct: 191 IPDPDLLIRTGGEMRVSNFLLWQIAYTELYVTDVLWPDFKPYHLLDAIKAYQHRSRRGG 249
>gi|33863328|ref|NP_894888.1| undecaprenyl pyrophosphate synthase [Prochlorococcus marinus str.
MIT 9313]
gi|124022702|ref|YP_001017009.1| undecaprenyl pyrophosphate synthase [Prochlorococcus marinus str.
MIT 9303]
gi|42559766|sp|Q7V6T7|UPPS_PROMM RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|33640777|emb|CAE21232.1| Undecaprenyl pyrophosphate synthetase (UPPS) [Prochlorococcus
marinus str. MIT 9313]
gi|123962988|gb|ABM77744.1| Undecaprenyl pyrophosphate synthetase (UPPS) [Prochlorococcus
marinus str. MIT 9303]
Length = 265
Score = 181 bits (459), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 90/229 (39%), Positives = 131/229 (57%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ +IMDGNGRWA ARGLPR GHR G+E + ++ GI LT +AFS NW R
Sbjct: 27 PNHVAVIMDGNGRWAKARGLPRMVGHRAGVEALKRTLRLCSDWGIGALTAYAFSTENWSR 86
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L + L++ SL++ +++R +G+ L + ++ EA + T N G+
Sbjct: 87 PGDEVNFLMTLFERVLQRELESLEREKVRIRFLGDLEGLPSGLQELISEATELTVRNNGI 146
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ + NY R E+ A + + Q G + +D + L T+ DPDL+IRT G
Sbjct: 147 HFNVCTNYGGRRELVLAAQKLAQRAARGDLDPTLIDENSFEAELLTAGEVDPDLLIRTSG 206
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+R+S+FLLWQ+AY+E WPDF AL Y R RRFGGL
Sbjct: 207 ERRISNFLLWQLAYAEIHVTDVCWPDFDEVALTKALFDYQSRCRRFGGL 255
>gi|291278554|ref|YP_003495389.1| undecaprenyl pyrophosphate synthetase [Deferribacter desulfuricans
SSM1]
gi|290753256|dbj|BAI79633.1| undecaprenyl pyrophosphate synthetase [Deferribacter desulfuricans
SSM1]
Length = 239
Score = 181 bits (459), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 94/233 (40%), Positives = 137/233 (58%), Gaps = 5/233 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M + P H+ IIMDGNGRWA R LPR GHR G+E N+IV+ A+++GIK L++FAFS
Sbjct: 1 MTNDKNPLHVAIIMDGNGRWAKQRNLPRIFGHRAGMESVNKIVSYASKLGIKYLSLFAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP E++ L++++ F+ K F + NIK+ V G + ++ L++ D +
Sbjct: 61 TENWLRPKDEVNGLMEILNEFIDKKFNEIIDKNIKLVVSGRLEQIPEEPRSKLEKLIDAS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N+G+ L +A NY R EI A+ I + S + +L ++PD DL
Sbjct: 121 SNNSGMVLNLALNYGGRSEIVDAVNKILK-----SGLKEIKEEEDFKDFLYNPEIPDVDL 175
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+IRT GE R+S+F+LW++AY+E F WPDF + F AL+ Y R RRFG
Sbjct: 176 LIRTSGEMRISNFMLWRLAYAELYFTEVLWPDFDEKEFDKALDNYKSRVRRFG 228
>gi|294340703|emb|CAZ89095.1| Undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans,poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS) [Thiomonas sp.
3As]
Length = 245
Score = 181 bits (459), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 94/240 (39%), Positives = 145/240 (60%), Gaps = 7/240 (2%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+A S+ P H+ ++MDGNGRWA R LPR +GH+ G++ +IV AE+G+K+LT+F
Sbjct: 6 IAKRDPSTLPRHVAVVMDGNGRWAQRRFLPRSSGHKFGVDALKKIVRHCAEIGVKHLTVF 65
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+ L+ L L++ L + +++ V+G+ + ++ ++ ++E
Sbjct: 66 AFSSENWARPAEEVQTLMDLFVKALQRESAELARQGVQLHVVGDLSAFSVEMRALIDQSE 125
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
TR N L L +A NY R ++++A + +F E + +A++L S PD
Sbjct: 126 ALTRQNDTLVLNVALNYGGRWDVTQAAQALFAAQEVPT-------QQALARHLALSHSPD 178
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL+IRTGGE R+S+FLLWQ+AY+E F WPDF+ E F AL + R RRFGG+ +
Sbjct: 179 PDLLIRTGGEHRISNFLLWQLAYTELYFSDILWPDFNAEAFDAALADFASRQRRFGGVPE 238
>gi|227510246|ref|ZP_03940295.1| di-trans-poly-cis-decaprenylcistransferase (undecaprenyl
diphosphate synthetase) [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227189898|gb|EEI69965.1| di-trans-poly-cis-decaprenylcistransferase (undecaprenyl
diphosphate synthetase) [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 227
Score = 181 bits (459), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 92/216 (42%), Positives = 135/216 (62%), Gaps = 3/216 (1%)
Query: 30 LPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKG 89
LPR AGHR+G+E + AA+++G+K LT++AFS NW+RP E+S L+ L F
Sbjct: 12 LPRIAGHRQGMETVKTVTMAASKLGVKVLTLYAFSTENWKRPKDEVSFLMGLPVKFFNNF 71
Query: 90 FYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIK 149
L +NN+KV V+G L ++ +++A QT TG+ L A NY SR +I A++
Sbjct: 72 VPELIENNVKVSVMGLIDQLPENTQKAVRDAISQTSKCTGMILNFALNYGSRLDIRLAVQ 131
Query: 150 NIFQDIESGSVCSHDVDSSLIAKYLDT---SDVPDPDLIIRTGGEKRLSDFLLWQVAYSE 206
NI +I++ ++ D+D LI+++L T D DPDL+IRT GE+R+S+FLLWQ+AYSE
Sbjct: 132 NIASEIKNDAISISDIDDDLISRHLMTGFLGDYADPDLLIRTSGEERISNFLLWQIAYSE 191
Query: 207 FVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
VF WPDF + + +Y R+RRFGGL +
Sbjct: 192 LVFTDALWPDFDGQTLRQMIFEYQHRNRRFGGLKNE 227
>gi|154149378|ref|YP_001406531.1| di-trans,poly-cis-decaprenylcistransferase [Campylobacter hominis
ATCC BAA-381]
gi|153805387|gb|ABS52394.1| di-trans,poly-cis-decaprenylcistransferase [Campylobacter hominis
ATCC BAA-381]
Length = 226
Score = 181 bits (459), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 131/227 (57%), Gaps = 7/227 (3%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA + L R GH G +V + + GI NLT++AFS NW+RP
Sbjct: 7 HLAIIMDGNGRWAKTKSLARIKGHEAGAKVVETVSEFCIKNGIANLTLYAFSTENWKRPE 66
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
SE++ L+ L+K F+ K KN IK + IG+ D+ + ++ T LN
Sbjct: 67 SEVNFLLNLLKKFIIKKREIFIKNEIKFKAIGDISVFSQDLQSEISALQNLTATYKKLNF 126
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A NY SRDEI RA K + Q +++ ++ LD++D D DL+IRTGGE
Sbjct: 127 NLALNYGSRDEIIRAAKKVIQK-------GDELNEQNLSANLDSADSGDVDLLIRTGGEI 179
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLS+F+LWQ +Y+E F +WPDFS + + + +++RRFGGL
Sbjct: 180 RLSNFMLWQASYAELAFTNTFWPDFSEDELAEIVENFKIKNRRFGGL 226
>gi|72382495|ref|YP_291850.1| undecaprenyl pyrophosphate synthase [Prochlorococcus marinus str.
NATL2A]
gi|72002345|gb|AAZ58147.1| Undecaprenyl pyrophosphate synthetase [Prochlorococcus marinus str.
NATL2A]
Length = 256
Score = 181 bits (459), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 90/229 (39%), Positives = 134/229 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI +IMDGNGRWA +GLPR GH G+E + + GI LT++AFS NW R
Sbjct: 28 PEHIAVIMDGNGRWAKEKGLPRTIGHTAGVEALKTTLHLCSNWGIGALTVYAFSTENWSR 87
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L +S LK+ +LK +K+ +G+ L + ++KE+ + T + G+
Sbjct: 88 PSEEVNFLMTLFESVLKRELTNLKLEEVKINFMGDLDPLPIGLKDLIKESVESTSNSKGI 147
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ + NY R E+ RA + + + G + +D ++ A L T+ DPDL+IRT G
Sbjct: 148 HFNVCTNYGGRRELVRAAQKLAERSVKGELDPSLIDENVFASELFTASEVDPDLLIRTSG 207
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
EKR+S+FLLWQ+AY+E WPDF+ + AL Y R RRFGG+
Sbjct: 208 EKRISNFLLWQLAYAEIHITDVLWPDFNADTLAKALLDYQSRRRRFGGV 256
>gi|285018795|ref|YP_003376506.1| undecaprenyl pyrophosphate synthase [Xanthomonas albilineans GPE
PC73]
gi|283474013|emb|CBA16514.1| probable undecaprenyl pyrophosphate synthase protein [Xanthomonas
albilineans]
Length = 253
Score = 181 bits (459), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 99/242 (40%), Positives = 140/242 (57%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + +S S P H+ IIMDGNGRWA R PR GHR G N + E GI LT+
Sbjct: 1 MHSDSVSMSLPRHLAIIMDGNGRWAQRRRRPRMIGHRAGARAVNRTIDFCLERGIAALTL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW RP E+ L+KL L + L++ ++VR IG R + + +A
Sbjct: 61 FAFSSENWGRPQDEVDALMKLFLHALDREVDELQRRGVRVRFIGERARFAPSLCERMNQA 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E +TR N L+L IA +Y R +I++A + + D+ SG + +D ++ L +D+P
Sbjct: 121 EARTRDNQALHLSIAASYGGRQDIAQAARALAADVASGRLRPEQIDEDALSARLALADLP 180
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
PDL IRTGG+ R+S+FLLWQ+AY+E F WP+F ++ HAL+ Y R+RRFG S
Sbjct: 181 PPDLFIRTGGDLRISNFLLWQMAYTELWFTETLWPEFDAQVLQHALDDYARRERRFGLTS 240
Query: 241 KK 242
+
Sbjct: 241 SQ 242
>gi|25028738|ref|NP_738792.1| putative undecaprenyl diphosphate synthase [Corynebacterium
efficiens YS-314]
gi|42559989|sp|Q8FNG2|UPPS2_COREF RecName: Full=Undecaprenyl pyrophosphate synthase 2; Short=UPP
synthase 2; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase 2;
AltName: Full=Undecaprenyl diphosphate synthase 2;
Short=UDS 2
gi|23494024|dbj|BAC18992.1| putative undecaprenyl diphosphate synthase [Corynebacterium
efficiens YS-314]
Length = 243
Score = 181 bits (458), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 87/227 (38%), Positives = 132/227 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI ++MDGNGRWA +G+ R GHR+G V ++V A +G+ L+ +AFS NWRR
Sbjct: 15 PRHIALVMDGNGRWATEKGMKRTEGHRRGEAVLLDVVDACLALGVPYLSAYAFSTENWRR 74
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + L++ L + ++VR +G R L ++ L+ AE+ T+ NT +
Sbjct: 75 STEEVRFLMGFNRDVLRRQRDGLHEKGVRVRWVGRRPRLWRSVIRELEAAEELTKDNTNM 134
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R EI A + I + +G + ++ +LD D+PD DL +R G
Sbjct: 135 TLAMCVNYGGRAEIIDAAREIARQAAAGQLRPEQINEKTFPDFLDEPDMPDVDLFLRPSG 194
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
EKR S+FLLWQ AY+E V+ + +PDF+ + F A+ +Y RDRRFG
Sbjct: 195 EKRTSNFLLWQSAYAEMVYQDKLFPDFTPQDLFDAVEEYARRDRRFG 241
>gi|237729480|ref|ZP_04559961.1| undecaprenyl pyrophosphate synthetase [Citrobacter sp. 30_2]
gi|226909209|gb|EEH95127.1| undecaprenyl pyrophosphate synthetase [Citrobacter sp. 30_2]
Length = 252
Score = 181 bits (458), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 88/226 (38%), Positives = 136/226 (60%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA +G R GH+ G + V+ AA GI LT++AFS NW RP
Sbjct: 19 HVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIDALTLYAFSSENWNRPA 78
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+S L++L L +L ++N+++R+IG+ + + ++++E T NTGL L
Sbjct: 79 QEVSALMELFVWALDSEVKNLHRHNVRLRIIGDISRFNSRLQERIRKSEAITAQNTGLTL 138
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA NY R +I + ++ + Q ++ G + +D ++ + + ++ DL+IRTGGE
Sbjct: 139 NIAANYGGRWDIVQGVRQLAQQVQDGVLHPEQIDEEMLGQQICMHELAPVDLVIRTGGEH 198
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R+S+FLLWQ+AY+E F WPDF + F AL+ + R+RRFGG
Sbjct: 199 RISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALHAFANRERRFGG 244
>gi|291456392|ref|ZP_06595782.1| di-trans,poly-cis-decaprenylcistransferase [Bifidobacterium breve
DSM 20213]
gi|291381669|gb|EFE89187.1| di-trans,poly-cis-decaprenylcistransferase [Bifidobacterium breve
DSM 20213]
Length = 264
Score = 181 bits (458), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 85/229 (37%), Positives = 135/229 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+G+IMDGNGRWA RG+ R GH+ V + +A A E G++ L+++ FS NW+R
Sbjct: 35 PRHVGVIMDGNGRWAKQRGMIRTNGHQAAEPVVFDTIAGAIEAGVRYLSLYTFSTENWKR 94
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + + + + + ++VR G R L ++ L+ A ++T+ N +
Sbjct: 95 SPQEVRFLMGFSREIIHRRVAQMDEWGVRVRWSGRRPKLWKSVIDELEVAMERTKNNKVI 154
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
++ NY R EI+ A I +++ G + V ++A +L D+PD DL+IRT G
Sbjct: 155 DVVFCINYGGRAEIADACAAIAREVRDGRISGDRVTEKMVADHLYNPDIPDCDLVIRTSG 214
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+R S+FL WQ AY+E F+PE +PD RE+ + A++ Y RDRRFGG+
Sbjct: 215 EQRTSNFLPWQAAYAELDFVPELFPDCGREVLWRAIDNYIHRDRRFGGV 263
>gi|261338828|ref|ZP_05966686.1| hypothetical protein ENTCAN_05023 [Enterobacter cancerogenus ATCC
35316]
gi|288318651|gb|EFC57589.1| di-trans,poly-cis-decaprenylcistransferase [Enterobacter
cancerogenus ATCC 35316]
Length = 252
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 137/231 (59%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA +G R GH+ G + V+ AA GI LT++AFS NW RP
Sbjct: 19 HVAIIMDGNGRWAKRQGKIRAFGHKAGAKSVRRAVSFAANNGIDALTLYAFSSENWNRPA 78
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E++ L++L L SL ++N+++R+IG + + +++AE T NTGL L
Sbjct: 79 QEVTALMELFVWALDSEVKSLHRHNVRLRIIGETSRFNSRLQERIRKAEALTENNTGLTL 138
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA NY R +I + ++++ + ++ G + +D + K + +++ DL+IRTGGE
Sbjct: 139 NIAANYGGRWDIIQGVRHLAEQVQEGLLRPDQIDEEALNKQICMNELAPVDLVIRTGGEH 198
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
R+S+FLLWQ+AY+E F WPDF + F AL+ + R+RRFGG G
Sbjct: 199 RISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALHAFANRERRFGGTEPGG 249
>gi|34558343|ref|NP_908158.1| undecaprenyl pyrophosphate synthase [Wolinella succinogenes DSM
1740]
gi|42559944|sp|Q7M7V7|UPPS_WOLSU RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|34484062|emb|CAE11058.1| PUTATIVE UNDECAPRENYL DIPHOSPHATE SYNTHASE [Wolinella succinogenes]
Length = 228
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 90/227 (39%), Positives = 135/227 (59%), Gaps = 7/227 (3%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA RG R GH KG E EI ++ I LT++AFS NW+RP
Sbjct: 9 HLAIIMDGNGRWAQERGKQRVRGHEKGAETIREITMFCSKSDISFLTLYAFSTENWKRPK 68
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+E+ L++L+ +LKK KNNI+ + IG+ +L ++ ++ +GL
Sbjct: 69 TEVDFLMRLLSDYLKKEAEVYLKNNIRFKAIGDLSRFSSRLLDEIETLTQKSASCSGLTQ 128
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A NY S+DEI RA + + IE+G +V ++++LDT+ PD D+++RTGG+
Sbjct: 129 VLALNYGSKDEIIRATQKM---IEAGV----EVSEENLSRFLDTAFAPDVDMLVRTGGDY 181
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLS++LLWQ +Y+E F P WPDF+ + ++ R RRFGG+
Sbjct: 182 RLSNYLLWQSSYAELFFTPTLWPDFTAGELAIQIEEFKRRKRRFGGI 228
>gi|159903635|ref|YP_001550979.1| undecaprenyl pyrophosphate synthetase [Prochlorococcus marinus str.
MIT 9211]
gi|159888811|gb|ABX09025.1| Undecaprenyl pyrophosphate synthetase (UPPS) [Prochlorococcus
marinus str. MIT 9211]
Length = 266
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 134/231 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI +IMDGNGRWA ARGL R GH G++ + ++ G+K LT++AFS NW R
Sbjct: 28 PEHIAVIMDGNGRWAKARGLSRTKGHIAGVDALKATLRLCSDWGLKALTVYAFSTENWSR 87
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L + LK+ +L +++R +G+ L + ++ EA T N G+
Sbjct: 88 PSEEVTFLMALFQRVLKRELEALILQEVRIRFLGDLDQLPGQLQDLITEATVLTSGNKGI 147
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ + NY R E+ + + + + +G + +D ++ A L T++ DPDL+IRT G
Sbjct: 148 HFNVCTNYGGRRELVKVAQRLAEKSVNGDLDPSLIDENVFAAELCTANDVDPDLLIRTSG 207
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E+RLS+FLLWQ+AY+E WPDF + AL Y R RRFGGL +
Sbjct: 208 ERRLSNFLLWQLAYAEIHVTDVLWPDFDKSSLLKALLDYQSRSRRFGGLQQ 258
>gi|238897806|ref|YP_002923485.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
gi|229465563|gb|ACQ67337.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
Length = 252
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 136/232 (58%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ S P H+ IIMDGNGRWA +G R GH++G +V A + +LT++AFS
Sbjct: 11 LRSHWPRHVAIIMDGNGRWAEKKGKLRILGHKEGARSVRNVVNFAVNHRLPSLTLYAFSS 70
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E++ L++L L +L KNN+ ++IG+ + ++ AE+ T
Sbjct: 71 ENWHRPEKEVTALMRLFMQTLGNEVKNLHKNNVCFQIIGDISRFTPRLQNRIRSAEELTE 130
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N GL L IA NY R +I ++++++ ++ G + ++ L+ YL + PD DL+
Sbjct: 131 NNNGLKLNIAANYGGRWDIIKSVQSLAALVKIGQLEPSQINEELMNSYLSLKEQPDVDLM 190
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRTGGE R+S+FLLWQ+AY+EF F WPDF +F ALN + R+RRFG
Sbjct: 191 IRTGGEYRVSNFLLWQIAYTEFYFTDVLWPDFDEFIFESALNAFAKRERRFG 242
>gi|319775148|ref|YP_004137636.1| undecaprenyl pyrophosphate synthase [Haemophilus influenzae F3047]
gi|317449739|emb|CBY85946.1| undecaprenyl pyrophosphate synthase [Haemophilus influenzae F3047]
Length = 223
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/221 (41%), Positives = 131/221 (59%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA + R GH G+ + VA A ++G++ LT++AFS NW RP EIS
Sbjct: 1 MDGNGRWAKQKNKMRIFGHTNGVTAVRKAVAYARQIGVEVLTLYAFSSENWSRPEQEISA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ L L + L KNNI +++IG+ + + +K+AE+ T NT L L IA N
Sbjct: 61 LMSLFMQALDREVKKLHKNNICLKIIGDVSRFSETLQEKIKKAENLTEKNTALTLNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y +I +A K I + ++ + D+++S +L T + P DL+IRT GE+R+S+F
Sbjct: 121 YGGCWDIIQAAKQIAEKVKKEEMSVSDINNSTFQHHLATQNAPPVDLLIRTSGEQRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
LLWQ+AY+E F WPDF++ F HA+ Y R RRFGG
Sbjct: 181 LLWQIAYAELYFSDVLWPDFNQLEFNHAIASYQQRHRRFGG 221
>gi|41408239|ref|NP_961075.1| hypothetical protein MAP2141c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41396594|gb|AAS04458.1| hypothetical protein MAP_2141c [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 296
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/227 (38%), Positives = 134/227 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ I+MDGNGRWA RG+ R GH+ G V +IV A E+GIK L+++AFS NW+R
Sbjct: 68 PNHVAIVMDGNGRWATERGMSRTDGHKAGEAVVIDIVCGAIEIGIKWLSLYAFSTENWKR 127
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + ++ +L +K+R +G+R L ++ L AE+ T+ N +
Sbjct: 128 SPEEVRFLMGFNRDVVRMRRVNLNTIGVKIRWVGSRPRLWRSVINELAIAEEMTKRNDVI 187
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ NY R EI+ A K I + +G + + S +A +L D+PD DL +RT G
Sbjct: 188 TVNYCVNYGGRAEIAEATKEIARLAAAGRLNPERITESTVAHHLQRPDIPDVDLFLRTSG 247
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+R S+F+LWQ AY+E++F + WPD+ R + A +Y R+RRFG
Sbjct: 248 EQRSSNFMLWQAAYAEYIFQDKLWPDYDRRDLWAACQEYASRNRRFG 294
>gi|220921623|ref|YP_002496924.1| undecaprenyl pyrophosphate synthase [Methylobacterium nodulans ORS
2060]
gi|219946229|gb|ACL56621.1| undecaprenyl diphosphate synthase [Methylobacterium nodulans ORS
2060]
Length = 233
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/228 (42%), Positives = 131/228 (57%), Gaps = 12/228 (5%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IMDGNGRWA ARGLPR AGHR G+E + AA ++GI LT+FAFS +NWRRP
Sbjct: 12 HVAAIMDGNGRWATARGLPRTAGHRAGVEAIRRVAEAAPDLGIGTLTLFAFSSDNWRRPP 71
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+E++ L+ L++ +L+ L + ++ VIG R L + L AE +T L+L
Sbjct: 72 AEVAGLMSLLRRYLRHETGRLARTGTRLTVIGRRDRLPAGLPDALARAEAETEGGERLHL 131
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA +YS+ I +G S + L+ + VPD DL+IR+GGEK
Sbjct: 132 RIAVDYSA-------RDAILAAAAAGIPESREAFGRLL-----SGGVPDVDLLIRSGGEK 179
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RLSDFLLW+ AY+E F WPDF + AL + R+RRFGGL
Sbjct: 180 RLSDFLLWECAYAELHFSDRMWPDFGPDDLAGALRDFAGRERRFGGLG 227
>gi|152979620|ref|YP_001345249.1| undecaprenyl diphosphate synthase [Actinobacillus succinogenes
130Z]
gi|150841343|gb|ABR75314.1| undecaprenyl diphosphate synthase [Actinobacillus succinogenes
130Z]
Length = 239
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/231 (39%), Positives = 135/231 (58%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S++ P H+ IIMDGNGRWA +G R GH G++ VA A G++ LT++AFS
Sbjct: 6 SNNIPKHVAIIMDGNGRWAKQQGKIRVFGHSNGVKAVRRSVAYALRTGVQVLTLYAFSSE 65
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP +E+S L+ L L + L KNNIK++V+G++ + + +++AE T
Sbjct: 66 NWNRPEAEVSALMTLFMQALDREAKKLHKNNIKLQVLGDKSGFSEKLQEKIEKAEKLTEN 125
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NT L + +A NY +I +A K + + G + D+ L + L T + P DL+I
Sbjct: 126 NTALIMNVAANYGGCWDIVQATKKLAAQTKEGKLEVDDITEELFQRNLVTKEQPMVDLLI 185
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE+R+S+FLLWQ+AY+E F WPDF + F A+ + R+RRFG
Sbjct: 186 RTSGEQRISNFLLWQIAYAELYFSDVLWPDFDEKEFNRAIFTFQQRERRFG 236
>gi|261337459|ref|ZP_05965343.1| di-trans,poly-cis-decaprenylcistransferase [Bifidobacterium
gallicum DSM 20093]
gi|270277852|gb|EFA23706.1| di-trans,poly-cis-decaprenylcistransferase [Bifidobacterium
gallicum DSM 20093]
Length = 262
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 83/229 (36%), Positives = 136/229 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+G+IMDGNGRWA RG+ R GH+ V + +A A E G++ L+++ FS NW+R
Sbjct: 33 PRHVGVIMDGNGRWAQQRGMIRTQGHQAAEPVVFDTIAGAIEAGVRYLSLYTFSTENWKR 92
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ + + ++VR G R L ++ L+ A + T+ N+ +
Sbjct: 93 SPQEVRFLMGFSRDIIRRRVKQMNEWGVRVRWSGRRPKLWKSVIDELESAMEITKHNSVI 152
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
++ NY R EI+ A I +++ G + V ++A++L D+PD DL+IRT G
Sbjct: 153 DVVFCINYGGRAEIADACAAIAREVRDGKISGDRVTEKMVAEHLYNPDIPDCDLVIRTSG 212
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+R S+FL W+ AY+E F+PE +PD R + + A++ Y RDRRFGG+
Sbjct: 213 EQRTSNFLPWEAAYAELEFVPELFPDCGRNVLWRAIDDYIHRDRRFGGV 261
>gi|118462927|ref|YP_881253.1| undecaprenyl pyrophosphate synthase [Mycobacterium avium 104]
gi|118164214|gb|ABK65111.1| undecaprenyl diphosphate synthase [Mycobacterium avium 104]
Length = 296
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/227 (38%), Positives = 134/227 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ I+MDGNGRWA RG+ R GH+ G V +IV A E+GIK L+++AFS NW+R
Sbjct: 68 PNHVAIVMDGNGRWATERGMSRTDGHKAGEAVVIDIVCGAIEIGIKWLSLYAFSTENWKR 127
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + ++ +L +K+R +G+R L ++ L AE+ T+ N +
Sbjct: 128 SPEEVRFLMGFNRDVVRMRRVNLNTIGVKIRWVGSRPRLWRSVINELAIAEEMTKRNDVI 187
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ NY R EI+ A K I + +G + + S +A +L D+PD DL +RT G
Sbjct: 188 TVNYCVNYGGRAEIAEATKEIARLAAAGRLNPERITESTVAHHLQRPDIPDVDLFLRTSG 247
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+R S+F+LWQ AY+E++F + WPD+ R + A +Y R+RRFG
Sbjct: 248 EQRSSNFMLWQAAYAEYIFQDKLWPDYDRRDLWAACQEYASRNRRFG 294
>gi|91788553|ref|YP_549505.1| undecaprenyl pyrophosphate synthetase [Polaromonas sp. JS666]
gi|91697778|gb|ABE44607.1| Undecaprenyl pyrophosphate synthetase [Polaromonas sp. JS666]
Length = 246
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 134/232 (57%), Gaps = 7/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I+MDGNGRWA R LPR AGH++G++ + V A E GI LT+FAFS NW R
Sbjct: 9 PHHVAIVMDGNGRWATKRFLPRIAGHKQGVDSLSRCVRACLERGIAVLTVFAFSSENWNR 68
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L+ L + +L + +++ +G+R L + + L +AE T N L
Sbjct: 69 PFEEVSGLMELLVLSLSREVPNLNASGVRLHFVGDRQRLSEKVQAGLAQAEHLTSGNHRL 128
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ FNY R +I++A K + E + + D + + + VPDPDL+IRTGG
Sbjct: 129 IFNVCFNYGGRWDIAQAAKKVASSGEPITELALD-------RAMALAHVPDPDLLIRTGG 181
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ AYSE F + WP+F A+ + R+RRFG S +
Sbjct: 182 ELRISNFLLWQAAYSELHFSDKLWPEFDEAALDEAIAVFRTRERRFGQTSAQ 233
>gi|296166315|ref|ZP_06848752.1| undecaprenyl diphosphate synthase [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295898324|gb|EFG77893.1| undecaprenyl diphosphate synthase [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 305
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 88/227 (38%), Positives = 135/227 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ I+MDGNGRWA +GL R GHR G V ++V A E+GIK L+++AFS NW+R
Sbjct: 77 PNHVAIVMDGNGRWATEQGLTRTDGHRAGEAVVIDVVCGAIEIGIKWLSLYAFSTENWKR 136
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + ++ +LK +K+R +G+R L ++ L AED T+ N +
Sbjct: 137 SPEEVRFLMGFNRDVVRMRRVNLKTIGVKIRWVGSRPRLWRSVINELAIAEDMTKDNDVI 196
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ NY R EI+ A + I + +G + V + +A +L D+PD DL +RT G
Sbjct: 197 TVNYCVNYGGRAEIADAAREIARLAAAGRLNPERVTEATVAHHLQRPDIPDVDLFLRTSG 256
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+R S+F+LWQ AY+E++F + WPD+ R + A +Y R+RRFG
Sbjct: 257 EQRSSNFMLWQAAYAEYIFQDKLWPDYDRRDLWAACEEYASRNRRFG 303
>gi|291616350|ref|YP_003519092.1| UppS [Pantoea ananatis LMG 20103]
gi|291151380|gb|ADD75964.1| UppS [Pantoea ananatis LMG 20103]
gi|327392802|dbj|BAK10224.1| undecaprenyl pyrophosphate synthetase UppS [Pantoea ananatis
AJ13355]
Length = 250
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 135/233 (57%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R +GH+ G++ V+ A ++ LT++AFS NW R
Sbjct: 17 PRHVAIIMDGNGRWAKNQGKLRISGHKAGVKSVRRAVSFAVSNNLEALTLYAFSSENWSR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L++L L SL K+N+++R+IG+ I ++ AE T N L
Sbjct: 77 PAQEVTALMELFVWALDSEVKSLHKHNVRLRIIGDISRFSPRIQERVRRAEALTENNDRL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I +K + + ++ G + + + L + + DL+IRTGG
Sbjct: 137 TLNIAANYGGRWDIIEGVKKLAEQVQEGLLRPDQITEESLTSQLCMNQLAPVDLVIRTGG 196
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
E R+S+FLLWQ+AY+EF F WPDF +F ALN ++LR+RRFGG + G
Sbjct: 197 EHRISNFLLWQIAYAEFYFTDVLWPDFDEHVFEGALNAFSLRERRFGGAAPGG 249
>gi|311741368|ref|ZP_07715192.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
pseudogenitalium ATCC 33035]
gi|311303538|gb|EFQ79617.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
pseudogenitalium ATCC 33035]
Length = 251
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 135/231 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI ++MDGNGRWA +G+ R GHR+G V ++V A G+ L+ +AFS NWRR
Sbjct: 21 PRHIALVMDGNGRWAQEKGMKRTEGHRRGEAVLLDVVDACLAAGVPYLSAYAFSTENWRR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + L++ L + ++V G R L ++ L+ A++ T+ NT +
Sbjct: 81 SPEEVRFLMGFNRDVLRRQREWLNERGVRVVWAGRRPRLWRSVIKELEAAQELTKDNTKM 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R E+ ++I + + +G + D+ IA++L D+PD DL +R G
Sbjct: 141 TLAMCVNYGGRAELVDGFRDIAKQVAAGELNPRDIKEETIAQHLYDPDMPDVDLFLRPSG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
EKR S+FLLWQ AY+E ++ + +PDF+ E F A+ +Y RDRRFGG+ K
Sbjct: 201 EKRTSNFLLWQSAYAEMIYQDKLFPDFTPEDLFAAIEEYARRDRRFGGVKK 251
>gi|308270380|emb|CBX26992.1| Undecaprenyl pyrophosphate synthetase [uncultured Desulfobacterium
sp.]
Length = 247
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/229 (40%), Positives = 129/229 (56%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R + R GH G IV A E+GI LT++AFS NW+R
Sbjct: 18 PKHIAIIMDGNGRWAEKRLMNRIKGHEAGSGAVRTIVRACREIGISVLTLYAFSTENWQR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EIS L+ L+ FL+ + +N+I++ IG L +++ L D T N G+
Sbjct: 78 PKIEISALMVLLNKFLESEKNEMMENDIRLNAIGQVDKLPENVRKTLNRTMDLTGKNKGM 137
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y R EI +K I Q ++ + + +A +L T+ +P PDL+IRT G
Sbjct: 138 LLNLALSYGGRTEIVDMVKIISQKVKDSKIDPDLITDEFVADHLYTAGMPYPDLLIRTSG 197
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+FLLWQ+AYSE WPDF +E + + R+RRFG +
Sbjct: 198 EMRISNFLLWQIAYSEIFITDTLWPDFGKEELIKIIYDFQNRERRFGNV 246
>gi|320108136|ref|YP_004183726.1| undecaprenyl diphosphate synthase [Terriglobus saanensis SP1PR4]
gi|319926657|gb|ADV83732.1| undecaprenyl diphosphate synthase [Terriglobus saanensis SP1PR4]
Length = 289
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/247 (38%), Positives = 144/247 (58%), Gaps = 18/247 (7%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI-NNWR 69
P+H+ IIMDGNGRWA R + R GH++G E + +V A+ + + LT++AFS+ NN R
Sbjct: 29 PEHVAIIMDGNGRWAGKRAMKRFRGHQQGAESVHFVVETASRINLPYLTLYAFSLENNLR 88
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP SE+S L+KL++S+L ++ NN+++ IG L +++ ++ AE +T NTG
Sbjct: 89 RPKSEVSFLMKLLRSYLVGNVKRMQDNNVRMAYIGRIHELPEEVQETMQWAEAETAKNTG 148
Query: 130 LNLFIAFNYSSRDEISRA----IKNIFQDIESGSVCSHDV-----------DSSLIAKYL 174
L +A NY SR EI A ++N + + + D+ DS A Y
Sbjct: 149 TTLTLALNYGSRCEIVDAARLTMQNTLAEAKRRGISVEDLLAVDEHAGITEDSLSAAMY- 207
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
T +PDPDL+IRT GE R+S+FLLWQ+AY+E WPDF ++ ++ RDR
Sbjct: 208 -THALPDPDLLIRTSGEMRISNFLLWQIAYAELHVTDLLWPDFRGLHLLESIAEFQRRDR 266
Query: 235 RFGGLSK 241
R+GG+ +
Sbjct: 267 RYGGIGQ 273
>gi|88608842|ref|YP_506808.1| undecaprenyl diphosphate synthase [Neorickettsia sennetsu str.
Miyayama]
gi|88601011|gb|ABD46479.1| undecaprenyl diphosphate synthase [Neorickettsia sennetsu str.
Miyayama]
Length = 230
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/233 (41%), Positives = 128/233 (54%), Gaps = 4/233 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M+ P HI IIMDGN RWA ARGL G++ G+E V A+ GI+ LT+F FS
Sbjct: 1 MIGKELPVHIAIIMDGNARWARARGLCNSDGYKMGVEAAFSAVRASCNAGIRYLTLFLFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+R ++ + + + L NIKV+VIG ++ L + V+K E T
Sbjct: 61 TENWKRNPDDVHLVFSIFEKASVTALDELCDANIKVKVIGEQVGLGESAKQVIKNLESGT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N+G+ L A NY R EI A+ + D + + +VD A YL T +PDPDL
Sbjct: 121 AKNSGMYLCFALNYGGRSEIINAVSRMISD----GLRAEEVDVQKFASYLYTDGIPDPDL 176
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IIRT GEKRLS+FLLWQ +YSE F WPDF+ + A+ Y R RR+G
Sbjct: 177 IIRTAGEKRLSNFLLWQSSYSELYFCDTLWPDFTEKDLEIAMEAYKARCRRYG 229
>gi|254774758|ref|ZP_05216274.1| undecaprenyl diphosphate synthase [Mycobacterium avium subsp. avium
ATCC 25291]
Length = 296
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/227 (38%), Positives = 134/227 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ I+MDGNGRWA RG+ R GH+ G V +IV A E+GIK L+++AFS NW+R
Sbjct: 68 PNHVAIVMDGNGRWATERGMSRTDGHKAGEAVVIDIVCGAIEIGIKWLSLYAFSTENWKR 127
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + ++ +L +K+R +G+R L ++ L AE+ T+ N +
Sbjct: 128 SPEEVRFLMGFNRDVVRMRRVNLNTIGVKIRWVGSRPRLWRSVINELAIAEEMTKRNDVI 187
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ NY R EI+ A K I + +G + + S +A +L D+PD DL +RT G
Sbjct: 188 TVNYCVNYGGRAEIAEATKEIARLAAAGRLNPERITESTVAHHLQRPDIPDVDLFLRTSG 247
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+R S+F+LWQ AY+E++F + WPD+ R + A +Y R+RRFG
Sbjct: 248 EQRSSNFMLWQAAYAEYIFQDKLWPDYDRRDLWAACQEYASRNRRFG 294
>gi|18424146|ref|NP_568883.1| dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase,
putative [Arabidopsis thaliana]
gi|75244417|sp|Q8GY03|DDPS4_ARATH RecName: Full=Dehydrodolichyl diphosphate synthase 4;
Short=Dedol-PP synthase 4
gi|26450940|dbj|BAC42577.1| putative mzn1 dehydrodolichyl diphosphate synthase [Arabidopsis
thaliana]
gi|28950851|gb|AAO63349.1| At5g58782 [Arabidopsis thaliana]
gi|332009715|gb|AED97098.1| dehydrodolichyl diphosphate synthase 4 [Arabidopsis thaliana]
Length = 289
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/229 (40%), Positives = 130/229 (56%), Gaps = 2/229 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGN RWA GL G+ G + E ++GI ++ FAFS NW R
Sbjct: 58 PRHVAVIMDGNRRWAKQTGLLTSQGYEAGAKRLLEFADLCFKLGINTVSAFAFSTENWGR 117
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ L + +LK + I+V VIGN + + +L + E E+ T+
Sbjct: 118 HKIEVKCLMYLFQRYLKSKIQFFQSKEIRVSVIGNLAKIPESLLRTVHELEEATKSYKKK 177
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT--SDVPDPDLIIRT 188
+L +A +YS R +I A KNI + E G + DVD +L + L T ++ P PDL+IRT
Sbjct: 178 HLILAIDYSGRFDILGACKNIVKKSEQGLIREEDVDETLFERELQTRCTEFPSPDLLIRT 237
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
GE+R+S+F LWQ+AY+EF F P WPDF ++ F AL Y RDRRFG
Sbjct: 238 SGEQRISNFFLWQLAYTEFFFSPVLWPDFDKQKFIEALVSYQRRDRRFG 286
>gi|300933270|ref|ZP_07148526.1| hypothetical protein CresD4_04325 [Corynebacterium resistens DSM
45100]
Length = 258
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/229 (38%), Positives = 131/229 (57%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI I+MDGNGRWA RGLPR GH++G V +V E+G+ L+ +AFS NWRR
Sbjct: 29 PKHIAIVMDGNGRWAQERGLPRTEGHKRGEGVLLNLVEECLELGVNYLSAYAFSTENWRR 88
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + L++ L +++R +G R L ++ L++AE QT NT +
Sbjct: 89 STEEVRFLMGFNRDVLRRQRDYLDSLGVRIRWVGRRPRLWRSVIAELEKAERQTANNTAM 148
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R EI A + I D+ G++ + + S A YLD D+PD DL +R G
Sbjct: 149 TLAMCVNYGGRAEIVDAARAIADDVARGALKARQITESTFANYLDEPDMPDVDLFLRPSG 208
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+R S+FL WQ Y+E V+ +PD++ A+ ++ RDRRFGG+
Sbjct: 209 EQRTSNFLPWQSTYAEMVYQDVLFPDYTPNDLRAAVLEFAKRDRRFGGV 257
>gi|302380483|ref|ZP_07268948.1| di-trans,poly-cis-decaprenylcistransferase [Finegoldia magna
ACS-171-V-Col3]
gi|303233647|ref|ZP_07320301.1| di-trans,poly-cis-decaprenylcistransferase [Finegoldia magna
BVS033A4]
gi|302311426|gb|EFK93442.1| di-trans,poly-cis-decaprenylcistransferase [Finegoldia magna
ACS-171-V-Col3]
gi|302495081|gb|EFL54833.1| di-trans,poly-cis-decaprenylcistransferase [Finegoldia magna
BVS033A4]
Length = 234
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/229 (41%), Positives = 138/229 (60%), Gaps = 7/229 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R PR GH +G++ ++V + +GIK L+++AFS NW+R
Sbjct: 12 PKHIAIIMDGNGRWATNRNKPRVFGHNEGMKRVVDVVENSLNIGIKYLSLYAFSTENWKR 71
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EI L++++ ++ L +K+ ++G+ L ++ ++ A D T+ N L
Sbjct: 72 PQKEIDFLMQILIKYIDDQLNKLVTQGVKINILGDISVLPKKVIQKIEYALDSTKDNNKL 131
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY SR EI A+ N IE+G + + + S+L L T + PD DL+IR GG
Sbjct: 132 ILNIAINYGSRQEILLAVNNA---IENGQILTENEFSNL----LYTRNQPDVDLLIRPGG 184
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
EKRLS+FLL+Q++Y+E F YWPDF + A+ Y R+RRFGGL
Sbjct: 185 EKRLSNFLLYQMSYAELYFSDTYWPDFKLDSLIDAIYWYQNRNRRFGGL 233
>gi|310287055|ref|YP_003938313.1| undecaprenyl diphosphate synthase [Bifidobacterium bifidum S17]
gi|309250991|gb|ADO52739.1| undecaprenyl diphosphate synthase [Bifidobacterium bifidum S17]
Length = 263
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 136/231 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+G+IMDGNGRWA RGL R GH+ V + +A A E G++ L+++ FS NW+R
Sbjct: 33 PRHVGVIMDGNGRWAQQRGLVRTDGHQAAEPVVFDTIAGAIEAGVRYLSLYTFSTENWKR 92
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + + + + ++VR G R L ++ L+ A ++T+ N +
Sbjct: 93 SPQEVRFLMGFSREIIHRRVAQMDDWGVRVRWSGRRPKLWKSVIDELEVAMERTKHNKVI 152
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
++ NY R EI+ A I +++ +G + V +IA +L D+PD DL+IRT G
Sbjct: 153 DVVFCINYGGRAEIADACAEIAREVAAGRIKGDRVTEKMIADHLYNPDIPDCDLVIRTSG 212
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E+R S+FL W+ AY+E F+PE +PD R++ + +++ Y RDRRFGG+ K
Sbjct: 213 EQRTSNFLPWEAAYAELDFVPELFPDCGRDVLWRSIDHYIHRDRRFGGVKK 263
>gi|195953625|ref|YP_002121915.1| undecaprenyl diphosphate synthase [Hydrogenobaculum sp. Y04AAS1]
gi|195933237|gb|ACG57937.1| undecaprenyl diphosphate synthase [Hydrogenobaculum sp. Y04AAS1]
Length = 233
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/235 (39%), Positives = 133/235 (56%), Gaps = 7/235 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M + P HI IIMDGNGRWA +G R GH G + + A E+GI +T+FAFS
Sbjct: 1 MDLNVPKHIAIIMDGNGRWAQEKGKNRFYGHYAGADAVEPVTLKAKELGISYITLFAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP EI L KL K +L + S+ KN IK++ IG + + +++L + E ++
Sbjct: 61 ENWKRPKEEIDVLFKLFKEYLIRKEESILKNGIKMKFIGRKDRIPEELLQYMDSIEQKSE 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N + L +A +Y D+I+RA + + V D I K LDT +P DL+
Sbjct: 121 KNDAITLTLAVDYGGLDDITRAFNKLLS--QKNQVTQED-----IKKALDTHFLPAVDLL 173
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IRTG EKR+S+FLLW +AY+E F +YWPDF+ E + ++ R RRFG +
Sbjct: 174 IRTGNEKRISNFLLWDIAYAEIFFCEKYWPDFTPEDLCMIVEDFSKRKRRFGAVQ 228
>gi|15825692|pdb|1JP3|A Chain A, Structure Of E.Coli Undecaprenyl Pyrophosphate Synthase
gi|15825693|pdb|1JP3|B Chain B, Structure Of E.Coli Undecaprenyl Pyrophosphate Synthase
Length = 253
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/244 (37%), Positives = 142/244 (58%), Gaps = 10/244 (4%)
Query: 5 MMSSSPP----------DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVG 54
M+S++ P H+ II DGNGRWA +G R GH+ G + V+ AA G
Sbjct: 2 MLSATQPLSEKLPAHGCRHVAIIXDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNG 61
Query: 55 IKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDIL 114
I+ LT++AFS NW RP E+S L +L L SL ++N+++R+IG+ + +
Sbjct: 62 IEALTLYAFSSENWNRPAQEVSALXELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQ 121
Query: 115 CVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYL 174
++++E T NTGL L IA NY R +I + ++ + + ++ G++ +D + +++
Sbjct: 122 ERIRKSEALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEXLNQHV 181
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
++ DL+IRTGGE R+S+FLLWQ+AY+E F WPDF + F ALN + R+R
Sbjct: 182 CXHELAPVDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRER 241
Query: 235 RFGG 238
RFGG
Sbjct: 242 RFGG 245
>gi|224282595|ref|ZP_03645917.1| undecaprenyl pyrophosphate synthetase [Bifidobacterium bifidum
NCIMB 41171]
gi|311063923|ref|YP_003970648.1| undecaprenyl pyrophosphate synthetase [Bifidobacterium bifidum
PRL2010]
gi|313139753|ref|ZP_07801946.1| undecaprenyl pyrophosphate synthetase [Bifidobacterium bifidum
NCIMB 41171]
gi|310866242|gb|ADP35611.1| UppS Undecaprenyl pyrophosphate synthetase [Bifidobacterium bifidum
PRL2010]
gi|313132263|gb|EFR49880.1| undecaprenyl pyrophosphate synthetase [Bifidobacterium bifidum
NCIMB 41171]
Length = 263
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 136/231 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+G+IMDGNGRWA RGL R GH+ V + +A A E G++ L+++ FS NW+R
Sbjct: 33 PRHVGVIMDGNGRWAQQRGLVRTDGHQAAEPVVFDTIAGAIEAGVRYLSLYTFSTENWKR 92
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + + + + ++VR G R L ++ L+ A ++T+ N +
Sbjct: 93 SPQEVRFLMGFSREIIHRRVAQMDDWGVRVRWSGRRPKLWKSVIDELEVAMERTKHNKVI 152
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
++ NY R EI+ A I +++ +G + V +IA +L D+PD DL+IRT G
Sbjct: 153 DVVFCINYGGRAEIADACAEIAREVAAGRIKGDRVTEKMIADHLYNPDIPDCDLVIRTSG 212
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E+R S+FL W+ AY+E F+PE +PD R++ + +++ Y RDRRFGG+ K
Sbjct: 213 EQRTSNFLPWEAAYAELDFVPELFPDCGRDVLWRSIDHYIHRDRRFGGVKK 263
>gi|283783958|ref|YP_003363823.1| undecaprenyl pyrophosphate synthetase [Citrobacter rodentium
ICC168]
gi|282947412|emb|CBG86957.1| undecaprenyl pyrophosphate synthetase [Citrobacter rodentium
ICC168]
Length = 252
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/226 (38%), Positives = 136/226 (60%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA +G R GH+ G + V+ AA GI LT++AFS NW RP
Sbjct: 19 HVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIDALTLYAFSSENWNRPA 78
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+S L++L L SL ++N+++R+IG+ + + ++++E T NTGL L
Sbjct: 79 QEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTARNTGLTL 138
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA NY R +I + ++ + + ++ G + +D ++ + + ++ DL+IRTGGE
Sbjct: 139 NIAANYGGRWDIVQGVRKLAEQVQEGVLRPDQIDEEMLNQQICMHELAPVDLVIRTGGEH 198
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R+S+FLLWQ+AY+E F WPDF + F AL+ + R+RRFGG
Sbjct: 199 RISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALHAFANRERRFGG 244
>gi|169824424|ref|YP_001692035.1| undecaprenyl pyrophosphate synthase [Finegoldia magna ATCC 29328]
gi|167831229|dbj|BAG08145.1| undecaprenyl pyrophosphate synthase [Finegoldia magna ATCC 29328]
Length = 234
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/229 (41%), Positives = 138/229 (60%), Gaps = 7/229 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R PR GH +G++ ++V + +GIK L+++AFS NW+R
Sbjct: 12 PKHIAIIMDGNGRWATNRNKPRVFGHNEGMKRVVDVVENSLNIGIKYLSLYAFSTENWKR 71
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EI L++++ ++ L +K+ ++G+ L ++ ++ A D T+ N L
Sbjct: 72 PQKEIDFLMQILIKYIDDQLNKLVTQGVKINILGDISVLPKKVIQKIEYALDSTKDNNKL 131
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY SR EI A+ N IE+G + + + S+L L T + PD DL+IR GG
Sbjct: 132 ILNIAINYGSRQEILLAVNNA---IENGQILTENEFSNL----LYTRNQPDVDLLIRPGG 184
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
EKRLS+FLL+Q++Y+E F YWPDF + A+ Y R+RRFGGL
Sbjct: 185 EKRLSNFLLYQMSYAELYFSDTYWPDFKLDSLVDAIYWYQNRNRRFGGL 233
>gi|222110430|ref|YP_002552694.1| undecaprenyl diphosphate synthase [Acidovorax ebreus TPSY]
gi|221729874|gb|ACM32694.1| undecaprenyl diphosphate synthase [Acidovorax ebreus TPSY]
Length = 244
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 129/232 (55%), Gaps = 7/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI I+MDGNGRWA R LPR AGHR+G+E V A + G+ LT+FAFS NW R
Sbjct: 9 PHHIAIVMDGNGRWATRRFLPRLAGHRQGVESLRRCVHACVQRGVGVLTVFAFSSENWNR 68
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L+ L + L ++ ++V +G + + + L+ AE T N L
Sbjct: 69 PADEVSGLMDLLAKALTREVPQLARDGVQVHFVGEKSGISAQVREGLQRAEAATASNQRL 128
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + FNY R +I++A + E + + + + + VPDPDL+IRTGG
Sbjct: 129 VLNVCFNYGGRWDITQAAAALAARGEP-------ITEASLHAAMGMAHVPDPDLLIRTGG 181
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FLLWQ AY+E F WPDF A+ + R+RRFG S +
Sbjct: 182 ERRISNFLLWQAAYTELYFSDRLWPDFDEAALDEAIADFAARERRFGQTSDQ 233
>gi|15827262|ref|NP_301525.1| undecaprenyl pyrophosphate synthase [Mycobacterium leprae TN]
gi|221229740|ref|YP_002503156.1| undecaprenyl pyrophosphate synthase [Mycobacterium leprae Br4923]
gi|586272|sp|P38119|UPPS_MYCLE RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|466983|gb|AAA17169.1| B1937_F2_65 [Mycobacterium leprae]
gi|13092811|emb|CAC30142.1| putative undecaprenyl pyrophosphate synthetase [Mycobacterium
leprae]
gi|219932847|emb|CAR70727.1| putative undecaprenyl pyrophosphate synthetase [Mycobacterium
leprae Br4923]
Length = 296
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 140/237 (59%), Gaps = 1/237 (0%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
VA +S++ P H+ I+MDGNGRWA RGL R GH+ G V ++ A E+GIK L++
Sbjct: 58 VAPRLSAAQLPTHVAIVMDGNGRWANQRGLHRTEGHKMGEAVVIDVACGAIELGIKWLSL 117
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+R V E+ L+ + +++ +LK+ +++R +G+R L ++ L A
Sbjct: 118 YAFSTENWKRSVEEVRFLMGFNRDVVRRRRENLKEMGVRIRWVGSRPRLWRSVINELAIA 177
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E T N + + NY R EI+ A + I + +G + + S I ++L D+P
Sbjct: 178 EHMTAGNDVITINYCVNYGGRTEIAEATREIARLAAAGRLNPERITESTITRHLQRPDIP 237
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
D DL +RT GE+R S+F+LWQ AY+E++F + WPD+ R + A +Y R+RRFG
Sbjct: 238 DVDLFVRTSGEQRSSNFMLWQAAYTEYIFQDKLWPDYDRRDLWAACEEYASRNRRFG 294
>gi|58581595|ref|YP_200611.1| undecaprenyl pyrophosphate synthase [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84623519|ref|YP_450891.1| undecaprenyl pyrophosphate synthetase [Xanthomonas oryzae pv.
oryzae MAFF 311018]
gi|73920286|sp|Q5H1E5|UPPS_XANOR RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|58426189|gb|AAW75226.1| undecaprenyl pyrophosphate synthetase [Xanthomonas oryzae pv.
oryzae KACC10331]
gi|84367459|dbj|BAE68617.1| undecaprenyl pyrophosphate synthetase [Xanthomonas oryzae pv.
oryzae MAFF 311018]
Length = 258
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 132/232 (56%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R PR GHR G N + E G+ LT+FAFS NW R
Sbjct: 16 PRHIAIIMDGNGRWAQRRRRPRVIGHRAGARAVNRTIDFCLEKGVSALTLFAFSSENWGR 75
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL L + L++ ++VR IG+R + + AE T N L
Sbjct: 76 PQDEVDALMKLFLHALDREVGELQRRGVQVRFIGDRSRFAAPLRDRMAGAERSTAANARL 135
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA +Y R +I+ A + + +D+ +G + +D +L++ + +D+P PDL IRTGG
Sbjct: 136 VLSIAASYGGRQDIATAARALAEDVAAGRLQPEQIDEALLSSRVALADLPAPDLFIRTGG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+ R+S+FLLWQ+AY+E F WP+F + AL+ Y R+RRFG S +
Sbjct: 196 DTRISNFLLWQLAYTELWFTETLWPEFDAGVMQQALDDYAGRERRFGLTSAQ 247
>gi|42559861|sp|Q93AU4|UPPS_MYCPF RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|15983301|gb|AAL11543.1| undecaprenyl diphosphate synthase [Mycobacterium parafortuitum]
Length = 296
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/227 (38%), Positives = 132/227 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ ++MDGNGRWA RGL R GH+ G V +I A E+GIK+LT++AFS NW+R
Sbjct: 68 PQHVAVVMDGNGRWATQRGLGRTEGHKMGEAVLIDITCGAIEIGIKHLTVYAFSTENWKR 127
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ +L +++R +G+R + ++ AE T N +
Sbjct: 128 STEEVRFLMGFNREVVRRRRENLNDMGVRMRWVGSRPRMWSSVIKEFDIAEQMTVDNDVI 187
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ NY R EI A + + Q+ G + + + + AK+L SD+PD DL IRT G
Sbjct: 188 TINYCVNYGGRTEIVEAARELAQEAVDGKIKPNRISEAQFAKHLHRSDIPDVDLFIRTSG 247
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+R S+FLLWQ AY+E+VF + WPD+ R + A +Y R+RRFG
Sbjct: 248 EQRASNFLLWQAAYAEYVFQDKLWPDYDRRDLWAACEEYVQRNRRFG 294
>gi|16752472|ref|NP_444734.1| hypothetical protein CP0183 [Chlamydophila pneumoniae AR39]
gi|7189113|gb|AAF38056.1| undecaprenyl pyrophosphate synthetase [Chlamydophila pneumoniae
AR39]
gi|269303444|gb|ACZ33544.1| undecaprenyl diphosphate synthase [Chlamydophila pneumoniae LPCoLN]
Length = 261
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/231 (41%), Positives = 130/231 (56%), Gaps = 4/231 (1%)
Query: 11 PDHIGIIMDGNGRWAAAR----GLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
P+H+ IIMDGN RW G +GH G +V I+ A ++GIK LT++ FS
Sbjct: 30 PNHVAIIMDGNRRWYKKHREECGHTHTSGHYYGAKVLPNILNAVLDLGIKVLTLYTFSTE 89
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
N+ RP EI E+ + + L K L +N I +R IG+ L I + T
Sbjct: 90 NFGRPKEEIQEIFNIFYTQLDKQLPYLMENEICLRCIGDLSKLPKGIQTKINHVSRMTAS 149
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
+ L L +A NY +DE+ RA K + DI + + S D+ SLI+ YLDTS + DPDL+I
Sbjct: 150 FSRLELVLAVNYGGKDELVRAFKKLHVDILNKKISSDDLSESLISSYLDTSGLTDPDLLI 209
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RTGGE R+S+FLLWQ+AY+E WPDF+ + F A+N Y R RR G
Sbjct: 210 RTGGEMRVSNFLLWQIAYTELYITDTLWPDFTPQDLFEAINVYQQRSRRGG 260
>gi|15618477|ref|NP_224762.1| hypothetical protein CPn0566 [Chlamydophila pneumoniae CWL029]
gi|15836097|ref|NP_300621.1| hypothetical protein CPj0566 [Chlamydophila pneumoniae J138]
gi|33241919|ref|NP_876860.1| hypothetical protein CpB0588 [Chlamydophila pneumoniae TW-183]
gi|13633997|sp|Q9Z7Y7|UPPS_CHLPN RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|4376859|gb|AAD18706.1| YaeS family hypothetical protein [Chlamydophila pneumoniae CWL029]
gi|8978937|dbj|BAA98772.1| YaeS family hypothetical protein [Chlamydophila pneumoniae J138]
gi|33236429|gb|AAP98517.1| hypothetical protein CpB0588 [Chlamydophila pneumoniae TW-183]
Length = 250
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/231 (41%), Positives = 130/231 (56%), Gaps = 4/231 (1%)
Query: 11 PDHIGIIMDGNGRWAAAR----GLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
P+H+ IIMDGN RW G +GH G +V I+ A ++GIK LT++ FS
Sbjct: 19 PNHVAIIMDGNRRWYKKHREECGHTHTSGHYYGAKVLPNILNAVLDLGIKVLTLYTFSTE 78
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
N+ RP EI E+ + + L K L +N I +R IG+ L I + T
Sbjct: 79 NFGRPKEEIQEIFNIFYTQLDKQLPYLMENEICLRCIGDLSKLPKGIQTKINHVSRMTAS 138
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
+ L L +A NY +DE+ RA K + DI + + S D+ SLI+ YLDTS + DPDL+I
Sbjct: 139 FSRLELVLAVNYGGKDELVRAFKKLHVDILNKKISSDDLSESLISSYLDTSGLTDPDLLI 198
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RTGGE R+S+FLLWQ+AY+E WPDF+ + F A+N Y R RR G
Sbjct: 199 RTGGEMRVSNFLLWQIAYTELYITDTLWPDFTPQDLFEAINVYQQRSRRGG 249
>gi|320095933|ref|ZP_08027553.1| di-trans,poly-cis-decaprenylcistransferase [Actinomyces sp. oral
taxon 178 str. F0338]
gi|319977124|gb|EFW08847.1| di-trans,poly-cis-decaprenylcistransferase [Actinomyces sp. oral
taxon 178 str. F0338]
Length = 280
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/228 (39%), Positives = 136/228 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ ++MDGNGRWA +RGLPR GHR G + +A A + G++ L+++ FS NW+R
Sbjct: 45 PAHVALVMDGNGRWANSRGLPRVEGHRAGEYALMDTIAGAIDAGVRYLSVYTFSTENWKR 104
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
+E+S ++ L++ L++ + VR G R L ++ L++A+ T NT L
Sbjct: 105 SPAEVSFIMNYASDVLERRTGQLREWGVHVRWSGRRPRLWKSVIRALEKADRATAHNTAL 164
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L + NY R EI+ A + I Q+ SG + V A++L DVPD DL+IRT G
Sbjct: 165 DLVMCVNYGGRAEIADAARAIAQEAASGRLSPRGVTERSFARHLYLPDVPDVDLMIRTSG 224
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R+S++LLWQ+AY+E +F+ WP F R + L Y R+RRFGG
Sbjct: 225 EQRVSNYLLWQLAYAEMMFVDTPWPAFDRGELWDCLLAYAGRERRFGG 272
>gi|297588403|ref|ZP_06947046.1| Di-trans,poly-cis-decaprenylcistransferase [Finegoldia magna ATCC
53516]
gi|297573776|gb|EFH92497.1| Di-trans,poly-cis-decaprenylcistransferase [Finegoldia magna ATCC
53516]
Length = 234
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/229 (41%), Positives = 137/229 (59%), Gaps = 7/229 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA PR GH +G++ ++V + +GI+ L+++AFS NW+R
Sbjct: 12 PKHIAIIMDGNGRWATKLNKPRVFGHNEGMKRVVDVVENSLNIGIQYLSLYAFSTENWKR 71
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EI L++++ ++ L +K+ ++G+ L + ++ ++ A D T+ N L
Sbjct: 72 PQKEIDFLMQILIKYIDDQLNKLVTQGVKINILGDISVLPEKVIQKIEYALDSTKDNDKL 131
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY SR EI +A+ IE G + + D S+L L T + PD DL+IR GG
Sbjct: 132 ILNIAINYGSRQEILKAVNTA---IEKGEILTDDEFSNL----LYTRNQPDVDLLIRPGG 184
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
EKRLS+FLL+Q++Y+E F YWPDF E A+ Y RDRRFGGL
Sbjct: 185 EKRLSNFLLYQMSYAELYFSDIYWPDFKLESLVDAIYWYQNRDRRFGGL 233
>gi|19553481|ref|NP_601483.1| undecaprenyl pyrophosphate synthase [Corynebacterium glutamicum
ATCC 13032]
gi|62391124|ref|YP_226526.1| undecaprenyl pyrophosphate synthase [Corynebacterium glutamicum
ATCC 13032]
gi|145296237|ref|YP_001139058.1| undecaprenyl pyrophosphate synthase [Corynebacterium glutamicum R]
gi|42559992|sp|Q8NNC1|UPPS2_CORGL RecName: Full=Undecaprenyl pyrophosphate synthase 2; Short=UPP
synthase 2; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase 2;
AltName: Full=Undecaprenyl diphosphate synthase 2;
Short=UDS 2
gi|21325054|dbj|BAB99676.1| Undecaprenyl pyrophosphate synthase [Corynebacterium glutamicum
ATCC 13032]
gi|41326463|emb|CAF20625.1| PUTATIVE UNDECAPRENYL DIPHOSPHATE SYNTHASE [Corynebacterium
glutamicum ATCC 13032]
gi|140846157|dbj|BAF55156.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 243
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/227 (38%), Positives = 133/227 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI ++MDGNGRWA RG+ R GH++G V ++V A E+G+ L+ +AFS NWRR
Sbjct: 15 PKHIALVMDGNGRWATERGMKRTEGHKRGEAVLLDVVDACIELGVPYLSAYAFSTENWRR 74
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + L++ L + ++VR +G R L ++ L+ AE+ T+ NT +
Sbjct: 75 STDEVRFLMGFNRDVLRRQRDDLHEKGVRVRWVGRRPRLWRSVIRELETAEELTKDNTTM 134
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R EI A ++I + G + + +LD D+PD DL +R G
Sbjct: 135 TLAMCVNYGGRAEIIDAARDIARLAAEGKLRPEQITEKTFPNFLDEPDMPDVDLFLRPSG 194
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
EKR S+FLLWQ AY+E V+ + +PDF+++ + A+ +Y RDRRFG
Sbjct: 195 EKRTSNFLLWQSAYAEMVYQDKLFPDFTQQDLYDAVLEYAKRDRRFG 241
>gi|302551285|ref|ZP_07303627.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces
viridochromogenes DSM 40736]
gi|302468903|gb|EFL31996.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces
viridochromogenes DSM 40736]
Length = 277
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/228 (39%), Positives = 135/228 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I+MDGNGRWA RGLPR GH+ G E +++ A E+G+ ++++AFS NW+R
Sbjct: 34 PKHVAIVMDGNGRWAKDRGLPRTEGHKVGAERVLDVLQGAIEMGVGAISLYAFSTENWKR 93
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + F++K L + I+VR +G L + L+ A++QT+ N L
Sbjct: 94 SPDEVRFLMNFNRDFIRKTRDQLDELGIRVRWVGRMPKLWRSVAKELQIAQEQTKGNDRL 153
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L+ NY R EI+ A + + QD+ SG + V+ AKY+ D+PD DL +R G
Sbjct: 154 TLYFCMNYGGRAEIADAAQALAQDVRSGKLDPSKVNEKTFAKYMYYPDMPDVDLFLRPSG 213
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S++L+WQ AY+E VF WPDF R + A ++ RDRRFGG
Sbjct: 214 EQRTSNYLIWQSAYAEMVFQDVLWPDFDRRDLWRACLEFASRDRRFGG 261
>gi|121594919|ref|YP_986815.1| undecaprenyl diphosphate synthase [Acidovorax sp. JS42]
gi|120606999|gb|ABM42739.1| undecaprenyl diphosphate synthase [Acidovorax sp. JS42]
Length = 244
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 129/232 (55%), Gaps = 7/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI I+MDGNGRWA R LPR AGHR+G+E V A + G+ LT+FAFS NW R
Sbjct: 9 PHHIAIVMDGNGRWATRRFLPRLAGHRQGVESLRRCVHACVQRGVGVLTVFAFSSENWNR 68
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L+ L + L ++ ++V +G + + + L+ AE T N L
Sbjct: 69 PADEVSGLMDLLAKALTREVPQLARDGLQVHFVGEKSGISAQVREGLQRAEAATASNQRL 128
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + FNY R +I++A + E + + + + + VPDPDL+IRTGG
Sbjct: 129 VLNVCFNYGGRWDITQAAAALAARGEP-------ITEASLHAAMGMAHVPDPDLLIRTGG 181
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FLLWQ AY+E F WPDF A+ + R+RRFG S +
Sbjct: 182 ERRISNFLLWQAAYTELYFSDRLWPDFDEAALDEAIADFAARERRFGQTSDQ 233
>gi|297203434|ref|ZP_06920831.1| long-chain Z-isoprenyl diphosphate synthase [Streptomyces sviceus
ATCC 29083]
gi|297148410|gb|EDY60394.2| long-chain Z-isoprenyl diphosphate synthase [Streptomyces sviceus
ATCC 29083]
Length = 631
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/230 (37%), Positives = 130/230 (56%), Gaps = 2/230 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ ++MDGNGRWA RGL R GHR GI E V A ++G++NLT++AFS NW+R
Sbjct: 383 PSHVAVVMDGNGRWAEQRGLSRSDGHRAGILATRETVYGALDIGLRNLTLYAFSTENWKR 442
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
EI+ ++ ++ L +G ++ N++ R G L +D++ L E +TR TG+
Sbjct: 443 DPEEIAVILSALRYELTEG--PIRDLNVRQRWAGQPGRLPEDLVQALMHQERRTRARTGM 500
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY RDEI+R + Q +G V + ++L D+PD DL+ RTG
Sbjct: 501 TLTVCINYGGRDEITRTAAALAQATRAGEVNPDLIGPDDFTRHLPHPDMPDVDLLWRTGN 560
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E+R S+FL W Y+E F P++WPD R + A+ +Y R RR G +
Sbjct: 561 EQRTSNFLPWHATYAELYFTPDHWPDTDRRDLWKAITEYTRRQRRHGAVP 610
>gi|296136575|ref|YP_003643817.1| undecaprenyl diphosphate synthase [Thiomonas intermedia K12]
gi|295796697|gb|ADG31487.1| undecaprenyl diphosphate synthase [Thiomonas intermedia K12]
Length = 245
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/240 (39%), Positives = 146/240 (60%), Gaps = 7/240 (2%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+A S+ P H+ ++MDGNGRWA R LPR +GH+ G++ +IV AE+G+K+LT+F
Sbjct: 6 IAKRDPSTLPRHVAVVMDGNGRWAQRRFLPRSSGHKFGVDALKKIVRHCAEIGVKHLTVF 65
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+ L+ L L++ L + +++ V+G+ + ++ ++ ++E
Sbjct: 66 AFSSENWARPAEEVQTLMDLFVKALQRESAELARQGVQLHVVGDLSAFSAEMRALIDQSE 125
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
TR N L L +A NY R ++++A + +F E+ + +A++L S PD
Sbjct: 126 ALTRQNDTLVLNVALNYGGRWDMTQAAQALFAAQEAPT-------QQALARHLALSHSPD 178
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL+IRTGGE R+S+FLLWQ+AY+E F WPDF+ E F AL + R RRFGG+ +
Sbjct: 179 PDLLIRTGGEHRISNFLLWQLAYTELYFSDILWPDFNAEAFDAALADFASRQRRFGGVPE 238
>gi|255292991|dbj|BAH90088.1| undecaprenyl pyrophosphate synthetase [uncultured bacterium]
Length = 278
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/228 (37%), Positives = 129/228 (56%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ I+MDGNGRWA R LPR GH G V +++ A E+G+ L+++AFS NWRR
Sbjct: 44 PNHVAIVMDGNGRWAKQRNLPRTKGHEAGEAVLFDVIEGAIEIGVNYLSVYAFSTENWRR 103
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + + + L ++VR G R L ++ L+ AE+Q++ NT L
Sbjct: 104 SPDEVRFLMGFNRDVIHRRRDELDDLGVRVRWAGRRPKLWGSVIKELQVAEEQSKNNTTL 163
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L NY R EI A + + + + G + + +LD ++PD DL +R+ G
Sbjct: 164 TLQFCVNYGGRAEIVDAAREVARLAKEGKLDPTRLTEERFRHFLDEPEIPDVDLFVRSSG 223
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S+FLLWQ AY+E VF+ WPD+ R + A+ Y RDRR+GG
Sbjct: 224 EQRFSNFLLWQSAYAEMVFLDTLWPDWDRRHLWQAIELYARRDRRYGG 271
>gi|255293007|dbj|BAH90103.1| undecaprenyl diphosphate synthase [uncultured bacterium]
Length = 252
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 86/228 (37%), Positives = 129/228 (56%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ I+MDGNGRWA R LPR GH G V +++ A E+G+ L+++AFS NWRR
Sbjct: 18 PNHVAIVMDGNGRWAKQRNLPRTKGHEAGEAVLFDVIEGAIEIGVNYLSVYAFSTENWRR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + + + L ++VR G R L ++ L+ AE+Q++ NT L
Sbjct: 78 SPDEVRFLMGFNRDVIHRRRDELDDLGVRVRWAGRRPKLWGSVIKELQVAEEQSKNNTTL 137
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L NY R EI A + + + + G + + +LD ++PD DL +R+ G
Sbjct: 138 TLQFCVNYGGRAEIVDAAREVARLAKEGKLDPTRLTEERFRHFLDEPEIPDVDLFVRSSG 197
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S+FLLWQ AY+E VF+ WPD+ R + A+ Y RDRR+GG
Sbjct: 198 EQRFSNFLLWQSAYAEMVFLDTLWPDWDRRHLWQAIELYARRDRRYGG 245
>gi|227874982|ref|ZP_03993131.1| undecaprenyl pyrophosphate synthetase [Mobiluncus mulieris ATCC
35243]
gi|227844431|gb|EEJ54591.1| undecaprenyl pyrophosphate synthetase [Mobiluncus mulieris ATCC
35243]
Length = 287
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 90/225 (40%), Positives = 132/225 (58%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA A+GL R AGH G + +A A G+K L+++AFS NWRR
Sbjct: 51 HVAIIMDGNGRWANAQGLNRTAGHEAGEYALMDTIAGAVAAGVKYLSVYAFSTENWRRSP 110
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+E+ L+ + L+ L + ++VR G L +L L+ AE TR N+G+ L
Sbjct: 111 AEVKFLMGYSRRVLRARRDELNRWGVRVRWSGREGRLWKSVLAELRAAEALTRDNSGMQL 170
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+ NY R E++ A + + + + + + +V +A+ L DVPD DL+IRT GE+
Sbjct: 171 IMCVNYGGRAELADAARAVAARVATREIRAENVTEKTLARELYLPDVPDVDLLIRTSGEQ 230
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
R+S+FL WQ AY+E VF PE WP+++RE + L + R RRFG
Sbjct: 231 RISNFLPWQAAYAELVFAPEPWPEYNRETLWRDLLVFQSRQRRFG 275
>gi|145223301|ref|YP_001133979.1| undecaprenyl diphosphate synthase [Mycobacterium gilvum PYR-GCK]
gi|145215787|gb|ABP45191.1| Undecaprenyl pyrophosphate synthetase [Mycobacterium gilvum
PYR-GCK]
Length = 230
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 87/227 (38%), Positives = 131/227 (57%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ ++MDGNGRWA RGL R GH+ G V +I A E+GIK+LT++AFS NW+R
Sbjct: 2 PQHVAVVMDGNGRWATQRGLGRTEGHKMGEAVLIDITCGAIEIGIKHLTVYAFSTENWKR 61
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ +L +++R +G+R + ++ AE T N +
Sbjct: 62 STEEVRFLMGFNREVVRRRRENLNDMGVRMRWVGSRPRMWSSVIKEFDIAEQMTVDNDVI 121
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ NY R EI A + + Q G + + + + AK+L SD+PD DL IRT G
Sbjct: 122 TINYCVNYGGRTEIVEAARELAQQAVDGKIKPNRITEAQFAKHLHRSDIPDVDLFIRTSG 181
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+R S+FLLWQ AY+E+VF + WPD+ R + A +Y R+RRFG
Sbjct: 182 EQRASNFLLWQAAYAEYVFQDKLWPDYDRRDLWAACEEYVHRNRRFG 228
>gi|114777896|ref|ZP_01452810.1| undecaprenyl diphosphate synthase [Mariprofundus ferrooxydans PV-1]
gi|114551683|gb|EAU54235.1| undecaprenyl diphosphate synthase [Mariprofundus ferrooxydans PV-1]
Length = 249
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 94/247 (38%), Positives = 141/247 (57%), Gaps = 9/247 (3%)
Query: 5 MMSSSP------PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNL 58
M +S+P P H+GIIMDGNGRWA A+G R GH+KG EV ++V A +GI+ L
Sbjct: 1 MTTSTPMGKPALPKHVGIIMDGNGRWAKAQGSARLEGHQKGAEVARDVVKWARNIGIRQL 60
Query: 59 TIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+++AFS NW RP E+ L+ L+ L + +++N I+ RV+G+ L ++
Sbjct: 61 SLYAFSTENWDRPKLEVRGLMSLLAMMLPRSLPDMQQNGIRFRVLGDIAPLPGSARRAVE 120
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKY---LD 175
+A +T NT L+L + NY + EI A+K++ + C ++S + +
Sbjct: 121 KACAETAANTDLDLILCLNYGGQQEILAAVKDVMRWALQQPDCDQALNSLTPETFRSMMW 180
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
DV DL+IRTGGEKR+S+F LW AY+E F WPDF + AL++Y R+RR
Sbjct: 181 RHDVAPLDLMIRTGGEKRISNFHLWDAAYAELYFTDVLWPDFCEQDLQAALSEYAGRERR 240
Query: 236 FGGLSKK 242
FG S++
Sbjct: 241 FGLTSEQ 247
>gi|300780722|ref|ZP_07090576.1| Di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
genitalium ATCC 33030]
gi|300532429|gb|EFK53490.1| Di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
genitalium ATCC 33030]
Length = 245
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 87/229 (37%), Positives = 135/229 (58%), Gaps = 1/229 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVG-IKNLTIFAFSINNWR 69
P HI ++MDGNGRWA RG+PR GHR G +V ++V A E+G ++ L+ + FS NWR
Sbjct: 15 PRHIALVMDGNGRWAQERGMPRTEGHRVGEKVLMDMVDACIEMGGVEWLSAYTFSTENWR 74
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ L+ + ++ L N+++ +G R L ++ L+ AE+ T+ NTG
Sbjct: 75 RSREEVRFLMGFSREVMRAERDQLHAKNVRIVWVGRRPRLWRSVIRELEAAEEMTKNNTG 134
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L + NY R E+ A + I Q G + ++ +A+++ D+PD D+ +R
Sbjct: 135 LTLAMCINYGGRAELIDATRTIAQLASEGKLAPGEISEETLARFMYRPDMPDVDMFLRPS 194
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GE+R S+FLLWQ AY+E V+ +PDF++E + A+ +Y RDRRFGG
Sbjct: 195 GEQRTSNFLLWQSAYAEMVYRDILFPDFTKEDLYDAVLEYAKRDRRFGG 243
>gi|254785178|ref|YP_003072606.1| di-trans,poly-cis-decaprenylcistransferase [Teredinibacter turnerae
T7901]
gi|237683810|gb|ACR11074.1| di-trans,poly-cis-decaprenylcistransferase [Teredinibacter turnerae
T7901]
Length = 250
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 92/236 (38%), Positives = 132/236 (55%), Gaps = 1/236 (0%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
V + S++P H+ IIMDGN RWA RG GHR G+E +++ A E G+ LT+F
Sbjct: 3 VNPIESANPLRHVAIIMDGNNRWAEQRGRQGITGHRAGVERIRDVLRACREEGVDALTLF 62
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP E+ L+ L ++LKK L + + +RVIGNR +L ++EAE
Sbjct: 63 AFSSENWRRPPKEVEALMGLFYNYLKKEARKLAEEGVAIRVIGNRARFSKKLLSAIEEAE 122
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
L IA +Y +I+++ K++ +D +G + D+ I + TS +P
Sbjct: 123 SIASSGEA-TLIIAADYGGCWDITQSAKSLAEDAIAGRISLDDITEQAIGSRISTSSLPP 181
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRTGGE R+S+FLLWQ AY+E F WP+F A+ + R RRFG
Sbjct: 182 LDLLIRTGGEYRISNFLLWQAAYAELYFSELLWPEFDGVAMKTAIEDFRRRQRRFG 237
>gi|118618889|ref|YP_907221.1| long (C50) chain Z-isoprenyl diphosphate synthase [Mycobacterium
ulcerans Agy99]
gi|183983651|ref|YP_001851942.1| long (C50) chain Z-isoprenyl diphosphate synthase [Mycobacterium
marinum M]
gi|118570999|gb|ABL05750.1| long (C50) chain Z-isoprenyl diphosphate synthase [Mycobacterium
ulcerans Agy99]
gi|183176977|gb|ACC42087.1| long (C50) chain Z-isoprenyl diphosphate synthase [Mycobacterium
marinum M]
Length = 296
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 85/227 (37%), Positives = 136/227 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ I+MDGNGRWA RGL R GH+ G V +I A E+GIK L+++AFS NW+R
Sbjct: 68 PNHVAIVMDGNGRWATERGLRRTEGHKMGEAVVIDIACGAVELGIKWLSLYAFSTENWKR 127
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ L + +++R +G+R L ++ L AE T N +
Sbjct: 128 SAEEVRFLMGFNRDVVRRRRDVLNQMGVRIRWVGSRPRLWRSVINELAVAEAMTNNNDVI 187
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ NY R EI+ A ++I +++ +G + + S IA+++ D+PD DL +RT G
Sbjct: 188 TINYCVNYGGRTEIAEATRDIAREVAAGRLNPERITESTIARHMQRPDIPDVDLFLRTSG 247
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+R S+F+LWQ AY+E++F + WPD+ R + A +Y R+RRFG
Sbjct: 248 EQRSSNFMLWQSAYAEYIFQDKLWPDYDRRDLWAACEEYASRNRRFG 294
>gi|306818300|ref|ZP_07452029.1| di-trans,poly-cis-decaprenylcistransferase [Mobiluncus mulieris
ATCC 35239]
gi|304648945|gb|EFM46241.1| di-trans,poly-cis-decaprenylcistransferase [Mobiluncus mulieris
ATCC 35239]
Length = 274
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 90/226 (39%), Positives = 132/226 (58%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA A+GL R AGH G + +A A G+K L+++AFS NWRR
Sbjct: 38 HVAIIMDGNGRWANAQGLNRTAGHEAGEYALMDTIAGAVAAGVKYLSVYAFSTENWRRSP 97
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+E+ L+ + L+ L + ++VR G L +L L+ AE TR N+G+ L
Sbjct: 98 AEVKFLMGYSRRVLRARRDELNRWGVRVRWSGREGRLWKSVLAELRAAEALTRDNSGMQL 157
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+ NY R E++ A + + + + + + +V +A+ L DVPD DL+IRT GE+
Sbjct: 158 IMCVNYGGRAELADAARAVAARVATREIRAENVTEKTLARELYLPDVPDVDLLIRTSGEQ 217
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R+S+FL WQ AY+E VF PE WP+++RE + L + R RRFG
Sbjct: 218 RISNFLPWQAAYAELVFAPEPWPEYNRETLWRDLLVFQSRQRRFGA 263
>gi|269976420|ref|ZP_06183405.1| di-trans,poly-cis-decaprenylcistransferase [Mobiluncus mulieris
28-1]
gi|307701420|ref|ZP_07638439.1| di-trans,poly-cis-decaprenylcistransferase [Mobiluncus mulieris
FB024-16]
gi|269935221|gb|EEZ91770.1| di-trans,poly-cis-decaprenylcistransferase [Mobiluncus mulieris
28-1]
gi|307613330|gb|EFN92580.1| di-trans,poly-cis-decaprenylcistransferase [Mobiluncus mulieris
FB024-16]
Length = 269
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 90/225 (40%), Positives = 131/225 (58%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA A+GL R AGH G + +A A G+K L+++AFS NWRR
Sbjct: 38 HVAIIMDGNGRWANAQGLNRTAGHEAGEYALMDTIAGAVAAGVKYLSVYAFSTENWRRSP 97
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+E+ L+ + L+ L + ++VR G L +L L+ AE TR N+G+ L
Sbjct: 98 AEVKFLMGYSRRVLRARRDELNRWGVRVRWSGREGRLWKSVLAELRAAEALTRDNSGMQL 157
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+ NY R E++ A + + + + + + +V +A+ L DVPD DL+IRT GE+
Sbjct: 158 IMCVNYGGRAELADAARAVAARVATREIRAENVTEKTLARELYLPDVPDVDLLIRTSGEQ 217
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
R S+FL WQ AY+E VF PE WP+++RE + L + R RRFG
Sbjct: 218 RTSNFLPWQAAYAELVFAPEPWPEYNRETLWRDLLAFQSRQRRFG 262
>gi|21618322|gb|AAM67372.1| undecaprenyl pyrophosphate synthetase-like [Arabidopsis thaliana]
Length = 289
Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 91/229 (39%), Positives = 129/229 (56%), Gaps = 2/229 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGN RWA GL G+ G + E ++GI ++ FAFS NW R
Sbjct: 58 PRHVAVIMDGNRRWAKQTGLLTSQGYEAGAKRLLEFADLCFKLGINTVSAFAFSTENWGR 117
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ L + +LK + I+V VIGN + + +L + E E+ T+
Sbjct: 118 HKIEVKCLMYLFQRYLKSKIQFFQSKEIRVSVIGNLAKIPESLLRTVHELEEATKSYKKK 177
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT--SDVPDPDLIIRT 188
+L +A +YS R +I A KNI + E G + DVD + + L T ++ P PDL+IRT
Sbjct: 178 HLILAIDYSGRFDILGACKNIVKKSEQGLIREEDVDETFFERELQTRCTEFPSPDLLIRT 237
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
GE+R+S+F LWQ+AY+EF F P WPDF ++ F AL Y RDRRFG
Sbjct: 238 SGEQRISNFFLWQLAYTEFFFSPVLWPDFDKQKFIEALVSYQRRDRRFG 286
>gi|16763611|ref|NP_459226.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|56412494|ref|YP_149569.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|62178791|ref|YP_215208.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|161612593|ref|YP_001586558.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167553366|ref|ZP_02347115.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
gi|167990107|ref|ZP_02571207.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168230529|ref|ZP_02655587.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
gi|168235000|ref|ZP_02660058.1| poly-cis-decaprenylcistransferase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|168244988|ref|ZP_02669920.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
gi|168263911|ref|ZP_02685884.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
gi|168464215|ref|ZP_02698118.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
gi|168823250|ref|ZP_02835250.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
gi|194450089|ref|YP_002044211.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194470073|ref|ZP_03076057.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|194736697|ref|YP_002113244.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197248928|ref|YP_002145226.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197264409|ref|ZP_03164483.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|197361429|ref|YP_002141065.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|198244628|ref|YP_002214182.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|200389072|ref|ZP_03215684.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|204927170|ref|ZP_03218372.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Javiana str. GA_MM04042433]
gi|205351558|ref|YP_002225359.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|207855739|ref|YP_002242390.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|224582069|ref|YP_002635867.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|238911287|ref|ZP_04655124.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|42559854|sp|Q8ZRP2|UPPS_SALTY RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|73920275|sp|Q5PD68|UPPS_SALPA RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|16418726|gb|AAL19185.1| undecaprenyl pyrophosphate synthetase (di-trans,
poly-cis-decaprenylcistransferase) [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|56126751|gb|AAV76257.1| undecaprenyl pyrophosphate synthetase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|62126424|gb|AAX64127.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|161361957|gb|ABX65725.1| hypothetical protein SPAB_00284 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194408393|gb|ACF68612.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
gi|194456437|gb|EDX45276.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|194712199|gb|ACF91420.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. CVM19633]
gi|195632769|gb|EDX51223.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
gi|197092905|emb|CAR58334.1| undecaprenyl pyrophosphate synthetase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|197212631|gb|ACH50028.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
gi|197242664|gb|EDY25284.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|197291793|gb|EDY31143.1| poly-cis-decaprenylcistransferase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|197939144|gb|ACH76477.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Dublin str. CT_02021853]
gi|199606170|gb|EDZ04715.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|204323835|gb|EDZ09030.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Javiana str. GA_MM04042433]
gi|205271339|emb|CAR36132.1| undecaprenyl pyrophosphate synthetase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|205322178|gb|EDZ10017.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
gi|205331306|gb|EDZ18070.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205334951|gb|EDZ21715.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
gi|205336221|gb|EDZ22985.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
gi|205340480|gb|EDZ27244.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
gi|205347444|gb|EDZ34075.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
gi|206707542|emb|CAR31816.1| undecaprenyl pyrophosphate synthetase [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|224466596|gb|ACN44426.1| undecaprenyl pyrophosphate synthetase [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|261245453|emb|CBG23243.1| undecaprenyl pyrophosphate synthetase [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|267991912|gb|ACY86797.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301156848|emb|CBW16324.1| undecaprenyl pyrophosphate synthetase [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|312911191|dbj|BAJ35165.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|320084475|emb|CBY94268.1| undecaprenyl pyrophosphate synthetase [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|322640691|gb|EFY37342.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322672187|gb|EFY68299.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322713245|gb|EFZ04816.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
gi|323128541|gb|ADX15971.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|323223352|gb|EGA07687.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|326621925|gb|EGE28270.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Dublin str. 3246]
gi|326626584|gb|EGE32927.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9]
gi|332987173|gb|AEF06156.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 252
Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 91/244 (37%), Positives = 142/244 (58%), Gaps = 10/244 (4%)
Query: 5 MMSSSPP----------DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVG 54
M+S++ P H+ IIMDGNGRWA +G R GH+ G + V+ AA G
Sbjct: 1 MLSATQPVSENLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNG 60
Query: 55 IKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDIL 114
I LT++AFS NW RP E+S L++L L SL ++N+++R+IG+ + +
Sbjct: 61 IDALTLYAFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDISRFNSRLQ 120
Query: 115 CVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYL 174
++++E T NTGL L IA NY R +I + ++ + + +++G + +D + + +
Sbjct: 121 ERIRKSEALTAHNTGLTLNIAANYGGRWDIVQGVRQLAEQVQAGVLRPDQIDEERLGQQI 180
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
++ DL+IRTGGE R+S+FLLWQ+AY+E F WPDF + F AL+ + R+R
Sbjct: 181 CMHELAPVDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALHAFANRER 240
Query: 235 RFGG 238
RFGG
Sbjct: 241 RFGG 244
>gi|296140450|ref|YP_003647693.1| undecaprenyl diphosphate synthase [Tsukamurella paurometabola DSM
20162]
gi|296028584|gb|ADG79354.1| undecaprenyl diphosphate synthase [Tsukamurella paurometabola DSM
20162]
Length = 271
Score = 179 bits (453), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 87/228 (38%), Positives = 131/228 (57%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ ++MDGNGRWA RGLPR GH +G V + V E+G+KNL+ +AFS NW R
Sbjct: 42 PNHVALVMDGNGRWAQERGLPRTKGHEQGEAVLMDTVCGCIEMGVKNLSAYAFSTENWTR 101
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ + + ++VR G R L ++ L+ AE+ T+ N+ +
Sbjct: 102 SPDEVRFLMGFNRDVIRRRRDEMNEMGVRVRWAGRRPRLWRSVIKELEVAEELTKDNSVM 161
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R EI A + I + + +G + + A YL D+PD DL +R G
Sbjct: 162 TLTMCVNYGGRAEIVDATREIARRVAAGEISPDRITEQSFAHYLYLPDMPDVDLFLRPSG 221
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
EKR S+FLLW+ AY+E+V+ +PDF R + A +Y RDRRFGG
Sbjct: 222 EKRSSNFLLWESAYAEYVYQDTLFPDFDRRNLWEACLEYAKRDRRFGG 269
>gi|315443761|ref|YP_004076640.1| undecaprenyl pyrophosphate synthetase [Mycobacterium sp. Spyr1]
gi|315262064|gb|ADT98805.1| Undecaprenyl pyrophosphate synthetase [Mycobacterium sp. Spyr1]
Length = 292
Score = 179 bits (453), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 87/227 (38%), Positives = 131/227 (57%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ ++MDGNGRWA RGL R GH+ G V +I A E+GIK+LT++AFS NW+R
Sbjct: 64 PQHVAVVMDGNGRWATQRGLGRTEGHKMGEAVLIDITCGAIEIGIKHLTVYAFSTENWKR 123
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ +L +++R +G+R + ++ AE T N +
Sbjct: 124 STEEVRFLMGFNREVVRRRRENLNDMGVRMRWVGSRPRMWSSVIKEFDIAEQMTVDNDVI 183
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ NY R EI A + + Q G + + + + AK+L SD+PD DL IRT G
Sbjct: 184 TINYCVNYGGRTEIVEAARELAQQAVDGKIKPNRITEAQFAKHLHRSDIPDVDLFIRTSG 243
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+R S+FLLWQ AY+E+VF + WPD+ R + A +Y R+RRFG
Sbjct: 244 EQRASNFLLWQAAYAEYVFQDKLWPDYDRRDLWAACEEYVHRNRRFG 290
>gi|297796813|ref|XP_002866291.1| hypothetical protein ARALYDRAFT_496003 [Arabidopsis lyrata subsp.
lyrata]
gi|297312126|gb|EFH42550.1| hypothetical protein ARALYDRAFT_496003 [Arabidopsis lyrata subsp.
lyrata]
Length = 289
Score = 179 bits (453), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 89/229 (38%), Positives = 132/229 (57%), Gaps = 2/229 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGN RWA GL G+ G + E ++GI ++ FAFS NW R
Sbjct: 58 PRHVAVIMDGNRRWAKQAGLLTSQGYEAGAKRLIEFAELCFKLGINTVSAFAFSTENWGR 117
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ L + +LK + I+V VIGN + + +L ++ E ED T+
Sbjct: 118 HKIEVKCLMYLFQRYLKSKIQFFQSKEIRVSVIGNLAKIPESLLGIITEIEDATKSYKKK 177
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT--SDVPDPDLIIRT 188
+L +A +YS R +I RA K+I + E G + +VD +L+ + L T ++ P PDL+IRT
Sbjct: 178 HLILAIDYSGRFDILRACKSIVKKSEQGLIREEEVDETLLERELQTKCTEFPSPDLLIRT 237
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
GE+R+S+F LWQ+AY+E F P WPDF ++ AL+ Y R+RRFG
Sbjct: 238 SGEQRISNFFLWQLAYTELFFSPVLWPDFDKDKLLDALDSYQRRERRFG 286
>gi|240102776|ref|YP_002959085.1| Undecaprenyl pyrophosphate synthetase
(Di-trans-poly-cis-decaprenylcistransferase) (uppS)
[Thermococcus gammatolerans EJ3]
gi|239910330|gb|ACS33221.1| Undecaprenyl pyrophosphate synthetase
(Di-trans-poly-cis-decaprenylcistransferase) (uppS)
[Thermococcus gammatolerans EJ3]
Length = 264
Score = 179 bits (453), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 91/239 (38%), Positives = 141/239 (58%), Gaps = 2/239 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + S + P H+ IIMDGN RWA P GH G EI+ E+GI+ LT+
Sbjct: 25 LFEKVKSGNMPKHVAIIMDGNRRWARKLEKPPWYGHYFGSRKLEEILEWCRELGIRTLTV 84
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFS N++R E++ L+ L + K+ + ++ ++V VIG + L +++ ++
Sbjct: 85 YAFSTENFKRSPEEVNALMNLFERKFKELVNDERIHRHGVRVNVIGRKELLPENVRKAIE 144
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
EAE TR + L IA Y R EI+ A+++I D+ +G V D+D LI +YL +
Sbjct: 145 EAERATRKYSNYTLNIALAYGGRSEITDAVRDIVGDVLAGKVKPEDIDEDLIKRYLYYPN 204
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+PDPD++IRTGGE R+S+FLL+Q+AYSE F+ Y+P+F + F + +Y R RRFG
Sbjct: 205 MPDPDIVIRTGGEVRISNFLLYQIAYSELFFVDVYFPEFRKIDFLRIIREYQKRQRRFG 263
>gi|309810997|ref|ZP_07704795.1| di-trans,poly-cis-decaprenylcistransferase [Dermacoccus sp.
Ellin185]
gi|308434961|gb|EFP58795.1| di-trans,poly-cis-decaprenylcistransferase [Dermacoccus sp.
Ellin185]
Length = 301
Score = 179 bits (453), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 86/228 (37%), Positives = 132/228 (57%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI ++MDGNGRWA RGLPR GH G + ++VA E+G+KN++ +AFS NWRR
Sbjct: 23 PQHIAMVMDGNGRWANERGLPRTKGHEAGEAMLIDVVAGCIELGVKNISAYAFSTENWRR 82
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ L ++V G + L ++ L+ A+++T+ NT
Sbjct: 83 SPEEVRFLMGFNRDTIRRRVDLLDSWGVRVIWSGRKPRLWRSVVRELEVAQERTKNNTVC 142
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R E+ A +++ D+ +G + + I YL D+PD DL +R+ G
Sbjct: 143 TLQMCVNYGGRAELVDATRSLADDVAAGRLNPKKITEKTIQSYLYAPDLPDVDLFVRSSG 202
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S+F LWQ AY+E VF+ WPDF R + A++ Y RDRR+GG
Sbjct: 203 EQRTSNFQLWQSAYAEMVFLDTLWPDFDRRKLWEAVDIYARRDRRYGG 250
>gi|269218572|ref|ZP_06162426.1| di-trans,poly-cis-decaprenylcistransferase [Actinomyces sp. oral
taxon 848 str. F0332]
gi|269211683|gb|EEZ78023.1| di-trans,poly-cis-decaprenylcistransferase [Actinomyces sp. oral
taxon 848 str. F0332]
Length = 229
Score = 179 bits (453), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 91/225 (40%), Positives = 128/225 (56%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA ARGLPR GHR G ++VA A E+G+K L+ +AFS NW+R +E+
Sbjct: 1 MDGNGRWANARGLPRIEGHRVGEATLMDVVAGALEIGVKELSAYAFSTENWKRSPAEVRF 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
++ + L+ L ++VR +G L +L L+ AE+ TR NT L L + N
Sbjct: 61 IMGFSRQVLRAQRDDLNAWGVRVRWVGRTPKLWASVLRELRAAEELTRNNTKLTLNMCIN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R EI+ A+++I ++ G + V+ I ++L +PD DL IRT GE R S+F
Sbjct: 121 YGGRAEIADAVRSIAREAAEGRLKPGAVNEKTIQRHLYAPAMPDVDLFIRTSGELRTSNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+W+ AY+E F WPDF R + A Y RDRRFGG +
Sbjct: 181 LMWESAYAELYFSDLAWPDFDRRELWKACEAYAERDRRFGGAQDR 225
>gi|22127006|ref|NP_670429.1| undecaprenyl pyrophosphate synthase [Yersinia pestis KIM 10]
gi|45442569|ref|NP_994108.1| undecaprenyl pyrophosphate synthase [Yersinia pestis biovar
Microtus str. 91001]
gi|51597313|ref|YP_071504.1| undecaprenyl pyrophosphate synthase [Yersinia pseudotuberculosis IP
32953]
gi|108806522|ref|YP_650438.1| undecaprenyl pyrophosphate synthase [Yersinia pestis Antiqua]
gi|108813111|ref|YP_648878.1| undecaprenyl pyrophosphate synthetase [Yersinia pestis Nepal516]
gi|145598945|ref|YP_001163021.1| undecaprenyl pyrophosphate synthetase [Yersinia pestis Pestoides F]
gi|149366950|ref|ZP_01888983.1| undecaprenyl pyrophosphate synthetase [Yersinia pestis CA88-4125]
gi|153950638|ref|YP_001400002.1| undecaprenyl pyrophosphate synthase [Yersinia pseudotuberculosis IP
31758]
gi|162421529|ref|YP_001607767.1| undecaprenyl pyrophosphate synthetase [Yersinia pestis Angola]
gi|165927096|ref|ZP_02222928.1| undecaprenyl diphosphate synthase [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165939819|ref|ZP_02228359.1| undecaprenyl diphosphate synthase [Yersinia pestis biovar
Orientalis str. IP275]
gi|166011937|ref|ZP_02232835.1| undecaprenyl diphosphate synthase [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166211502|ref|ZP_02237537.1| undecaprenyl diphosphate synthase [Yersinia pestis biovar Antiqua
str. B42003004]
gi|167400023|ref|ZP_02305541.1| undecaprenyl diphosphate synthase [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167419453|ref|ZP_02311206.1| undecaprenyl diphosphate synthase [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167425310|ref|ZP_02317063.1| undecaprenyl diphosphate synthase [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|167470426|ref|ZP_02335130.1| undecaprenyl diphosphate synthase [Yersinia pestis FV-1]
gi|170023320|ref|YP_001719825.1| undecaprenyl pyrophosphate synthase [Yersinia pseudotuberculosis
YPIII]
gi|186896418|ref|YP_001873530.1| undecaprenyl pyrophosphate synthase [Yersinia pseudotuberculosis
PB1/+]
gi|218928217|ref|YP_002346092.1| undecaprenyl pyrophosphate synthase [Yersinia pestis CO92]
gi|229837756|ref|ZP_04457916.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) [Yersinia
pestis Pestoides A]
gi|229840978|ref|ZP_04461137.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) [Yersinia
pestis biovar Orientalis str. PEXU2]
gi|229843079|ref|ZP_04463229.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) [Yersinia
pestis biovar Orientalis str. India 195]
gi|229903554|ref|ZP_04518667.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) [Yersinia
pestis Nepal516]
gi|270487335|ref|ZP_06204409.1| di-trans,poly-cis-decaprenylcistransferase [Yersinia pestis KIM
D27]
gi|42560001|sp|Q8ZH61|UPPS_YERPE RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|73920287|sp|Q667J4|UPPS_YERPS RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|21960052|gb|AAM86680.1|AE013913_10 hypothetical protein y3130 [Yersinia pestis KIM 10]
gi|45437434|gb|AAS62985.1| undecaprenyl pyrophosphate synthetase [Yersinia pestis biovar
Microtus str. 91001]
gi|51590595|emb|CAH22236.1| undecaprenyl pyrophosphate synthetase [Yersinia pseudotuberculosis
IP 32953]
gi|108776759|gb|ABG19278.1| Undecaprenyl pyrophosphate synthetase [Yersinia pestis Nepal516]
gi|108778435|gb|ABG12493.1| Undecaprenyl pyrophosphate synthetase [Yersinia pestis Antiqua]
gi|115346828|emb|CAL19714.1| undecaprenyl pyrophosphate synthetase [Yersinia pestis CO92]
gi|145210641|gb|ABP40048.1| Undecaprenyl pyrophosphate synthetase [Yersinia pestis Pestoides F]
gi|149290564|gb|EDM40640.1| undecaprenyl pyrophosphate synthetase [Yersinia pestis CA88-4125]
gi|152962133|gb|ABS49594.1| undecaprenyl diphosphate synthase [Yersinia pseudotuberculosis IP
31758]
gi|162354344|gb|ABX88292.1| undecaprenyl diphosphate synthase [Yersinia pestis Angola]
gi|165912222|gb|EDR30859.1| undecaprenyl diphosphate synthase [Yersinia pestis biovar
Orientalis str. IP275]
gi|165920992|gb|EDR38216.1| undecaprenyl diphosphate synthase [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165989203|gb|EDR41504.1| undecaprenyl diphosphate synthase [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166207273|gb|EDR51753.1| undecaprenyl diphosphate synthase [Yersinia pestis biovar Antiqua
str. B42003004]
gi|166962194|gb|EDR58215.1| undecaprenyl diphosphate synthase [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167050731|gb|EDR62139.1| undecaprenyl diphosphate synthase [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167055710|gb|EDR65494.1| undecaprenyl diphosphate synthase [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|169749854|gb|ACA67372.1| undecaprenyl diphosphate synthase [Yersinia pseudotuberculosis
YPIII]
gi|186699444|gb|ACC90073.1| undecaprenyl diphosphate synthase [Yersinia pseudotuberculosis
PB1/+]
gi|229679324|gb|EEO75427.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) [Yersinia
pestis Nepal516]
gi|229689955|gb|EEO82014.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) [Yersinia
pestis biovar Orientalis str. India 195]
gi|229697344|gb|EEO87391.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) [Yersinia
pestis biovar Orientalis str. PEXU2]
gi|229704133|gb|EEO91145.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) [Yersinia
pestis Pestoides A]
gi|262365344|gb|ACY61901.1| undecaprenyl pyrophosphate synthetase [Yersinia pestis D182038]
gi|270335839|gb|EFA46616.1| di-trans,poly-cis-decaprenylcistransferase [Yersinia pestis KIM
D27]
gi|320014183|gb|ADV97754.1| undecaprenyl pyrophosphate synthetase [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 252
Score = 179 bits (453), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 88/235 (37%), Positives = 136/235 (57%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+S P H+ IIMDGNGRWA +G R GH+ G++ V+ AA+ + LT++AFS
Sbjct: 11 LSPRSPRHVAIIMDGNGRWAKNKGKLRVFGHKAGVKSVRRAVSFAAKHNLDALTLYAFSS 70
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E++ L++L L SL K+N+++ +IG+ + ++ +E T
Sbjct: 71 ENWNRPDQEVTALMELFVRALDSEVKSLHKHNVRLSIIGDISRFSGRLQERIRRSEKLTA 130
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N GL L IA NY R +I + ++++ + ++ G + D+ + Y+ + DL+
Sbjct: 131 NNDGLKLNIAANYGGRWDIIQGVRHLAEQVQKGELQPTDISEESLNSYICLHEQSQVDLV 190
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IRTGGE R+S+FLLWQ+AY+E F WPDF +F ALN + R+RRFGG +
Sbjct: 191 IRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDENVFEGALNAFAQRERRFGGTT 245
>gi|304312452|ref|YP_003812050.1| Undecaprenyl pyrophosphate synthetase [gamma proteobacterium HdN1]
gi|301798185|emb|CBL46407.1| Undecaprenyl pyrophosphate synthetase [gamma proteobacterium HdN1]
Length = 278
Score = 179 bits (453), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 86/236 (36%), Positives = 134/236 (56%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S P H+ IIMDGN RWA RGL GH++G + V A G++ LT++AFS
Sbjct: 15 SQGVPRHLAIIMDGNNRWARQRGLRGVEGHKQGARAVRDTVENCARAGVEVLTVYAFSSE 74
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+ L++L + L L KN I++R IG+ + + +++A T
Sbjct: 75 NWRRPQEEVDALMELFLASLADEVPDLHKNQIQLRFIGDLSAFSPRLREKMQQAVSLTAN 134
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N + +A NY +I+ A + + +++ G + +++ + + +++ D+P PDL I
Sbjct: 135 NQRMVFAVAVNYGGHWDITNAARLLALEVQEGRLQPNEITAERMQQFIALGDLPLPDLCI 194
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE+R+S+FLLWQ+AY+E F YWPDF ++ A Y R RRFG S++
Sbjct: 195 RTGGEQRISNFLLWQLAYAELYFTESYWPDFDQQALQQAFVDYQGRQRRFGRTSEQ 250
>gi|326561011|gb|EGE11376.1| undecaprenyl pyrophosphate synthase [Moraxella catarrhalis 7169]
gi|326566760|gb|EGE16899.1| undecaprenyl pyrophosphate synthase [Moraxella catarrhalis
103P14B1]
gi|326576672|gb|EGE26579.1| undecaprenyl pyrophosphate synthase [Moraxella catarrhalis
101P30B1]
Length = 256
Score = 178 bits (452), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 87/244 (35%), Positives = 143/244 (58%), Gaps = 2/244 (0%)
Query: 1 MVASMMSSSP--PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNL 58
M + S P P HI IIMDGN R+ ++ L AGH G + + IV +G++ L
Sbjct: 1 MTTQICESLPIIPKHIAIIMDGNNRFGKSKQLATGAGHVAGKDALDPIVEHCLALGVEVL 60
Query: 59 TIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
T+FAFS NW RP E+ L++L+ + + + ++ I++R IG+R +D D++ ++
Sbjct: 61 TVFAFSSENWARPKDEVDLLMRLLSQTIYEQLPRMNQHRIRLRFIGDRSQIDGDLVKLMA 120
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
+AE +T + L IA +Y + +I+ A K + + +E G + + D+D +I L+ +D
Sbjct: 121 QAEAKTADFDAMTLVIAISYGGQWDITNAAKKLAKQVELGHLSADDIDIQMIKTQLELAD 180
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+P D++IRTGGE R+S+FLLWQ AY+E F P WP+F + + + R+RRFG
Sbjct: 181 LPSVDMLIRTGGEYRISNFLLWQTAYAELFFTPTLWPEFGCDELDEMIRIFAGRERRFGM 240
Query: 239 LSKK 242
S++
Sbjct: 241 TSEQ 244
>gi|296112768|ref|YP_003626706.1| undecaprenyl pyrophosphate synthetase [Moraxella catarrhalis RH4]
gi|295920462|gb|ADG60813.1| undecaprenyl pyrophosphate synthetase [Moraxella catarrhalis RH4]
gi|326563740|gb|EGE13991.1| undecaprenyl pyrophosphate synthase [Moraxella catarrhalis 46P47B1]
gi|326564387|gb|EGE14615.1| undecaprenyl pyrophosphate synthase [Moraxella catarrhalis 12P80B1]
gi|326567398|gb|EGE17513.1| undecaprenyl pyrophosphate synthase [Moraxella catarrhalis BC1]
gi|326569317|gb|EGE19377.1| undecaprenyl pyrophosphate synthase [Moraxella catarrhalis BC8]
gi|326571476|gb|EGE21491.1| undecaprenyl pyrophosphate synthase [Moraxella catarrhalis BC7]
gi|326575241|gb|EGE25169.1| undecaprenyl pyrophosphate synthase [Moraxella catarrhalis CO72]
gi|326577653|gb|EGE27530.1| undecaprenyl pyrophosphate synthase [Moraxella catarrhalis O35E]
Length = 248
Score = 178 bits (452), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 87/244 (35%), Positives = 143/244 (58%), Gaps = 2/244 (0%)
Query: 1 MVASMMSSSP--PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNL 58
M + S P P HI IIMDGN R+ ++ L AGH G + + IV +G++ L
Sbjct: 1 MTTQICESLPIIPKHIAIIMDGNNRFGKSKQLATGAGHVAGKDALDPIVEHCLALGVEVL 60
Query: 59 TIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
T+FAFS NW RP E+ L++L+ + + + ++ I++R IG+R +D D++ ++
Sbjct: 61 TVFAFSSENWARPKDEVDLLMRLLSQTIYEQLPRMNQHRIRLRFIGDRSQIDGDLVKLMA 120
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
+AE +T + L IA +Y + +I+ A K + + +E G + + D+D +I L+ +D
Sbjct: 121 QAEAKTADFDAMTLVIAISYGGQWDITNAAKKLAKQVELGHLSADDIDIQMIKTQLELAD 180
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+P D++IRTGGE R+S+FLLWQ AY+E F P WP+F + + + R+RRFG
Sbjct: 181 LPSVDMLIRTGGEYRISNFLLWQTAYAELFFTPTLWPEFGCDELDEMIRIFAGRERRFGM 240
Query: 239 LSKK 242
S++
Sbjct: 241 TSEQ 244
>gi|118468831|ref|YP_888762.1| undecaprenyl pyrophosphate synthase [Mycobacterium smegmatis str.
MC2 155]
gi|118170118|gb|ABK71014.1| undecaprenyl diphosphate synthase [Mycobacterium smegmatis str. MC2
155]
Length = 293
Score = 178 bits (452), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 133/227 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ ++MDGNGRWA RGL R GH+ G V +I A E+GIK+LT++AFS NW+R
Sbjct: 65 PNHVAVVMDGNGRWATQRGLGRTEGHKMGEAVLIDITCGAIEIGIKHLTVYAFSTENWKR 124
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ +L +++R +G+R + ++ AE T N +
Sbjct: 125 STEEVRFLMGFNREVVRRRRENLNDMGVRMRWVGSRPRMWRSVIKEFDIAEQMTVDNDVI 184
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ NY R EI A + + Q+ G + + ++ AK+L +D+PD DL IRT G
Sbjct: 185 TINYCVNYGGRTEIVEAARALAQEAVDGKINPARISEAMFAKHLHRADIPDVDLFIRTSG 244
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+R S+FLLWQ AY+E+VF + WPD+ R + A +Y R+RRFG
Sbjct: 245 EQRASNFLLWQAAYAEYVFQDKLWPDYDRRDLWAACEEYVNRNRRFG 291
>gi|227833626|ref|YP_002835333.1| Undecaprenyl pyrophosphate synthase [Corynebacterium aurimucosum
ATCC 700975]
gi|262184629|ref|ZP_06044050.1| Undecaprenyl pyrophosphate synthase [Corynebacterium aurimucosum
ATCC 700975]
gi|227454642|gb|ACP33395.1| Undecaprenyl pyrophosphate synthase [Corynebacterium aurimucosum
ATCC 700975]
Length = 250
Score = 178 bits (452), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 84/229 (36%), Positives = 134/229 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI ++MDGNGRWA RG+ R GHR+G V ++V A +G+ L+ +AFS NWRR
Sbjct: 21 PRHIALVMDGNGRWAEERGMKRTEGHRRGEAVLLDVVDACLALGVPYLSAYAFSTENWRR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + L++ + L + ++V G R L ++ L+ AE+ T+ NT +
Sbjct: 81 SAEEVRFLMGFNRDVLRRQRHWLNERGVRVVWAGRRPRLWRSVIKELEAAEELTKDNTKM 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R E+ I+ + + + G + ++ +++ + D+PD DL +R G
Sbjct: 141 TLVMCVNYGGRAELVDGIRELAEQVSRGELDPRSINEKMVSSVMYDPDMPDVDLFLRPSG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
EKR S+FLLWQ AY+E ++ + +PDF+ E F A+ +Y RDRRFGG+
Sbjct: 201 EKRTSNFLLWQSAYAEMIYQDKLFPDFTPEDLFAAVEEYARRDRRFGGV 249
>gi|255323741|ref|ZP_05364869.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
tuberculostearicum SK141]
gi|255299231|gb|EET78520.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
tuberculostearicum SK141]
Length = 251
Score = 178 bits (451), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 134/231 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI ++MDGNGRWA +G+ R GHR+G V ++V A G+ L+ +AFS NWRR
Sbjct: 21 PRHIALVMDGNGRWAQEKGMKRTEGHRRGEAVLLDVVDACLAAGVPYLSAYAFSTENWRR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + L++ L + ++V G R L ++ L+ A++ T+ NT +
Sbjct: 81 SPEEVRFLMGFNRDVLRRQREWLNERGVRVVWAGRRPRLWRSVIKELEAAQELTKDNTKM 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R E+ ++I + + +G + D+ IA++L +PD DL +R G
Sbjct: 141 TLAMCVNYGGRAELVDGFRDIAKQVAAGELNPRDIKEETIAQHLYDPSMPDVDLFLRPSG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
EKR S+FLLWQ AY+E ++ + +PDF+ E F A+ +Y RDRRFGG+ K
Sbjct: 201 EKRTSNFLLWQSAYAEMIYQDKLFPDFTPEDLFAAIEEYARRDRRFGGVKK 251
>gi|255525479|ref|ZP_05392416.1| undecaprenyl diphosphate synthase [Clostridium carboxidivorans P7]
gi|296188587|ref|ZP_06856975.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium
carboxidivorans P7]
gi|255510844|gb|EET87147.1| undecaprenyl diphosphate synthase [Clostridium carboxidivorans P7]
gi|296046851|gb|EFG86297.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium
carboxidivorans P7]
Length = 239
Score = 178 bits (451), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 91/220 (41%), Positives = 132/220 (60%), Gaps = 1/220 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI II DGNGRWA +GLPR GH+ G + I A +E+G++ LT + FS NW R
Sbjct: 17 PKHIAIICDGNGRWAKEKGLPRYLGHKAGTDPIKTITKACSELGVEVLTFYVFSTENWNR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E++ L+ L F K + KN +KV+ IGN SL ++ +K+ E T N+G+
Sbjct: 77 SKQEVNFLMNLFIEFFIKLQNEVGKN-VKVKHIGNMDSLSSKLINEIKKTEKLTENNSGM 135
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY SR E++ A+K+I D+ + ++ + +D +LI Y+ TS +PD DLIIRT G
Sbjct: 136 VLNVALNYGSRSEMTNAVKSIISDMNNENLRNDKIDETLINSYMYTSGLPDVDLIIRTSG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
E+R+S+FLLWQ A ++ +WPDF A+ YN
Sbjct: 196 ERRISNFLLWQSAKAKLWITKYFWPDFKIGHLNEAIKFYN 235
>gi|256830147|ref|YP_003158875.1| undecaprenyl diphosphate synthase [Desulfomicrobium baculatum DSM
4028]
gi|256579323|gb|ACU90459.1| undecaprenyl diphosphate synthase [Desulfomicrobium baculatum DSM
4028]
Length = 233
Score = 178 bits (451), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 96/228 (42%), Positives = 131/228 (57%), Gaps = 4/228 (1%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P +H+ IIMDGNGRWA ARGL R GH+ G E EIV ++GI LT++ FS NW
Sbjct: 3 PINHLAIIMDGNGRWARARGLDRSDGHKAGTETAREIVKECRKLGIPYLTLYTFSKENWS 62
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ L L+K FL + SL + +I++ V+G+ L VL+ ++T +
Sbjct: 63 RPKQEVGFLFGLLKDFLTEELPSLLEQSIRLNVLGDLDELPLPTRQVLRHVMEKTAGCSA 122
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ L +A NYS R EI RA + + + V ++ + A L T+ +PDPDLI+RT
Sbjct: 123 MTLNLALNYSGRLEILRACQALLKK----QVKPSELTGEMFADELYTAGMPDPDLILRTS 178
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
GE RLS++LL+Q AYSE F WPDF AL +Y R RRFG
Sbjct: 179 GELRLSNYLLFQSAYSELYFTDVAWPDFHAPQLEAALAEYASRQRRFG 226
>gi|255534361|ref|YP_003094732.1| Undecaprenyl pyrophosphate synthetase [Flavobacteriaceae bacterium
3519-10]
gi|255340557|gb|ACU06670.1| Undecaprenyl pyrophosphate synthetase [Flavobacteriaceae bacterium
3519-10]
Length = 261
Score = 177 bits (450), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 130/232 (56%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +RG R GH+ I+ E V A E+ I LT++ FS NW R
Sbjct: 25 PQHVAIIMDGNGRWAKSRGQKRTFGHKHAIKAVREAVNACNEIHIPYLTLYTFSSENWNR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ LI L + +++ +IG+ L + ++ D T+ N
Sbjct: 85 PEDEVDTLMGLISETLILEAEEIFTKGLRMHIIGDIEKLPQLVREQMQHLVDITKDNKQG 144
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL +A +Y S E+ A+K I +++G + + + +L T D P DL+IRT G
Sbjct: 145 NLILALSYGSHSEMLNAVKQISTKVKNGELSEEQITEKVFEDHLYTKDFPPVDLLIRTSG 204
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AY+E F+ WPDF RE FF ++ Y ++RRFG S++
Sbjct: 205 EVRISNFLLWQIAYAELQFLDILWPDFGREDFFKCISDYQHKERRFGKTSEQ 256
>gi|212223519|ref|YP_002306755.1| undecaprenyl diphosphate synthase [Thermococcus onnurineus NA1]
gi|212008476|gb|ACJ15858.1| undecaprenyl diphosphate synthase [Thermococcus onnurineus NA1]
Length = 264
Score = 177 bits (450), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 93/229 (40%), Positives = 133/229 (58%), Gaps = 2/229 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGN RWA P GH G EI+ E+GI+ LT++AFS N+RR
Sbjct: 35 PKHVAIIMDGNRRWARKLEKPPWYGHLFGSRKLEEILEWCRELGIRTLTVYAFSTENFRR 94
Query: 71 PVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
E++ L+ L + ++ + K I+V VIG + L +++ +EAE TR
Sbjct: 95 SPEEVNALMNLFEEKFRELVNDERIHKYGIRVNVIGRKELLPENVREAAEEAERVTRKYN 154
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
L IA Y R EI+ A+K I D+ +G + D+D LI KYL ++PDPD++IRT
Sbjct: 155 NYTLNIALAYGGRSEIADAVKEIVDDVLAGKISREDIDEDLIKKYLYYPNMPDPDIVIRT 214
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
GGE R+S+FLL+Q+AYSE F+ Y+P+F + F + +Y R RRFG
Sbjct: 215 GGEVRISNFLLYQIAYSELFFVDVYFPEFRKIDFLRIIREYQKRQRRFG 263
>gi|257126983|ref|YP_003165097.1| undecaprenyl diphosphate synthase [Leptotrichia buccalis C-1013-b]
gi|257050922|gb|ACV40106.1| undecaprenyl diphosphate synthase [Leptotrichia buccalis C-1013-b]
Length = 272
Score = 177 bits (450), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 142/264 (53%), Gaps = 32/264 (12%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA RG R GHR G +I+ A +G+K LT++AFS NW+R
Sbjct: 9 PKHIAIIMDGNGRWAKKRGKIRLEGHRAGANSLEKILRHAGNIGVKYLTVYAFSTENWKR 68
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L +L + +LKK +K+ V G + ++ + +L ++E E+ +
Sbjct: 69 PEKEVNGLMDLFAKYLDREKKTLKKQGVKLLVTGAKENISEKLLKKIEETENYLANCENI 128
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDI---ESGSVCSH--------------------DVDS 167
IAFNY R EI A+ + + E+ V S D +
Sbjct: 129 VFNIAFNYGGRREIVDAVNKVLETKLLNETSGVASEQFNNENNGLNVTEKVVNGFVDKEE 188
Query: 168 SL---------IAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS 218
+L +K++ ++PDP+L+IRT GE R+S+FLLW+VAYSEF YWPDF
Sbjct: 189 NLENIKITEEEFSKFMYRPEIPDPELVIRTSGEFRISNFLLWEVAYSEFYITDVYWPDFD 248
Query: 219 RELFFHALNQYNLRDRRFGGLSKK 242
+ A+ +N RDRR+GGL+ K
Sbjct: 249 EKELDKAILSFNKRDRRYGGLNVK 272
>gi|15835350|ref|NP_297109.1| undecaprenyl pyrophosphate synthetase [Chlamydia muridarum Nigg]
gi|270285522|ref|ZP_06194916.1| undecaprenyl pyrophosphate synthetase [Chlamydia muridarum Nigg]
gi|270289533|ref|ZP_06195835.1| undecaprenyl pyrophosphate synthetase [Chlamydia muridarum Weiss]
gi|301336919|ref|ZP_07225121.1| undecaprenyl pyrophosphate synthase [Chlamydia muridarum MopnTet14]
gi|13633991|sp|Q9PJU2|UPPS_CHLMU RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|7190765|gb|AAF39545.1| undecaprenyl pyrophosphate synthetase [Chlamydia muridarum Nigg]
Length = 253
Score = 177 bits (450), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 91/231 (39%), Positives = 131/231 (56%), Gaps = 4/231 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGL----PRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
P HI IIMDGN RW +GHR+G + +IV AA +G++ LT+FAFS
Sbjct: 22 PKHIAIIMDGNRRWQKKHEQFCKSNAISGHRRGADSIPQIVDTAALLGVEALTLFAFSTE 81
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
N+ R +E++EL L S L L I++R IG+ L ++ + +A T
Sbjct: 82 NFSRSKTEVAELFSLFNSQLHSKLSFLHDREIRLRCIGDLSKLPQELQNNIAKAVSATTH 141
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
+ + L A NY S++E+ RA K + QD+ + + +++ LI+ YLDTS +PDPDL+I
Sbjct: 142 YSHMELIFAINYGSKNELVRAFKELHQDLTNKKISINEISEELISSYLDTSGLPDPDLLI 201
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RTGGE R+S+FLLWQ+AY+E WPDF+ A+ Y R RR G
Sbjct: 202 RTGGEMRVSNFLLWQIAYTELYVTDVLWPDFTAHDLLEAIKTYQQRSRRGG 252
>gi|302869286|ref|YP_003837923.1| undecaprenyl diphosphate synthase [Micromonospora aurantiaca ATCC
27029]
gi|315504239|ref|YP_004083126.1| undecaprenyl diphosphate synthase [Micromonospora sp. L5]
gi|302572145|gb|ADL48347.1| undecaprenyl diphosphate synthase [Micromonospora aurantiaca ATCC
27029]
gi|315410858|gb|ADU08975.1| undecaprenyl diphosphate synthase [Micromonospora sp. L5]
Length = 270
Score = 177 bits (450), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 88/226 (38%), Positives = 129/226 (57%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ I+MDGNGRWA RGLPR GH +G + V A E+GI L+ +AFS NWRR
Sbjct: 35 HVAIVMDGNGRWAKERGLPRTKGHEQGEHSLFDAVEGAIEMGIPYLSAYAFSTENWRRSP 94
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+ L+ + +++ L ++V G L ++ L+ AE+ +R N+ L L
Sbjct: 95 DEVRFLMGFNRDVIRRRRDQLVDLGVRVVWSGRAGRLWKSVISELQTAEEMSRGNSTLTL 154
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
NY + EI+ A I +D+ +G + V+ +A+YL +VP+ DL +R GE+
Sbjct: 155 QFCVNYGGQAEIADAAAGIARDVAAGRLDPAKVNEKTVARYLYHPEVPEVDLFLRPSGEQ 214
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R+S+FLLWQ AY+E V++ WPDF R ++A Y RDRRFGG
Sbjct: 215 RISNFLLWQTAYAELVYLDTLWPDFDRRHLWYACELYAQRDRRFGG 260
>gi|207092139|ref|ZP_03239926.1| hypothetical protein HpylHP_03835 [Helicobacter pylori
HPKX_438_AG0C1]
Length = 234
Score = 177 bits (450), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 88/227 (38%), Positives = 137/227 (60%), Gaps = 1/227 (0%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPK 66
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
SE+ L+K++K +LK ++ NNI+ R IG+ ++ + + E+ TR
Sbjct: 67 SEVDFLMKMLKKYLKDERFTYLDNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFTQ 126
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A NY S++EISRA K++ + S +++ I+ LDT D+P+ DL++RTGGE
Sbjct: 127 VLALNYGSKNEISRAFKSLLESPPSHISLLESLENE-ISNRLDTRDLPEVDLLLRTGGEM 185
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 186 RLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 232
>gi|238796614|ref|ZP_04640121.1| Di-trans,poly-cis-decaprenylcistransferase [Yersinia mollaretii
ATCC 43969]
gi|238719592|gb|EEQ11401.1| Di-trans,poly-cis-decaprenylcistransferase [Yersinia mollaretii
ATCC 43969]
Length = 238
Score = 177 bits (450), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 88/230 (38%), Positives = 136/230 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R GH+ G++ V+ AA + LT++AFS NW R
Sbjct: 2 PRHVAIIMDGNGRWAKNQGKLRVFGHKAGVKSVRRAVSFAATHHLDALTLYAFSSENWNR 61
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L++L L SL K+N+++ VIG+ + + ++ +E T N GL
Sbjct: 62 PAQEVTALMELFVRALDSEVKSLHKHNVRLSVIGDISRFSERLQQRIRRSEALTVNNDGL 121
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I + ++++ + I+ G + D++ + ++ + + DL+IRTGG
Sbjct: 122 KLNIAANYGGRWDIIQGVRHLAEQIQRGELQPIDINEESLNSHICLHEQSEVDLVIRTGG 181
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E R+S+FLLWQ+AY+E F WPDF +F ALN + R+RRFGG +
Sbjct: 182 EHRISNFLLWQIAYAELYFTDVLWPDFDEHVFEGALNAFAQRERRFGGTT 231
>gi|120404780|ref|YP_954609.1| undecaprenyl diphosphate synthase [Mycobacterium vanbaalenii PYR-1]
gi|119957598|gb|ABM14603.1| Undecaprenyl pyrophosphate synthetase [Mycobacterium vanbaalenii
PYR-1]
Length = 231
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 131/227 (57%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ ++MDGNGRWA RGL R GH+ G V +I A E+GIK+LT++AFS NW+R
Sbjct: 2 PNHVAVVMDGNGRWATQRGLGRTEGHKMGEAVLIDITCGAIEIGIKHLTVYAFSTENWKR 61
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ +L +++R +G+R + ++ AE T N +
Sbjct: 62 STEEVRFLMGFNREVVRRRRENLNDMGVRMRWVGSRPRMWRSVIKEFDIAEQMTVDNDVI 121
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ NY R EI A + + Q G + + + AK+L +D+PD DL IRT G
Sbjct: 122 TINYCVNYGGRTEIVEAARELAQQAVDGKINPARITEATFAKHLHRADIPDVDLFIRTSG 181
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+R S+FLLWQ AY+E+VF + WPD+ R + A +Y R+RRFG
Sbjct: 182 EQRASNFLLWQAAYAEYVFQDKLWPDYDRRDLWAACEEYVNRNRRFG 228
>gi|307328364|ref|ZP_07607540.1| undecaprenyl diphosphate synthase [Streptomyces violaceusniger Tu
4113]
gi|306885937|gb|EFN16947.1| undecaprenyl diphosphate synthase [Streptomyces violaceusniger Tu
4113]
Length = 272
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 132/231 (57%), Gaps = 1/231 (0%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S P H+ IIMDGNGRWAA RGL R GH+ G+ +V A E GI++L++F FS
Sbjct: 37 SPGRPRHLAIIMDGNGRWAALRGLSRTRGHQAGVLALPRVVDTALEEGIEHLSLFFFSTE 96
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP +E++ L++L L F + +++R +G+ L L L+ AE T
Sbjct: 97 NWNRPRAEVAALMRLTAQ-LADVFRGYGERGVRLRWLGSEARLPRATLAALRRAEADTCD 155
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N + L FN+ R+EI+ + + G++ +D +L ++L +D+PD D+++
Sbjct: 156 NGAMTLAFCFNHGGREEIAHVATRLARASADGALDPGLIDEALFTRHLPHADLPDIDMLV 215
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE+R+S+F+LW+ AY+E F+ WPDF+ E L + R RRFG
Sbjct: 216 RTSGEQRISNFMLWRAAYAELFFVDTLWPDFTGEELRALLAAFASRKRRFG 266
>gi|167626814|ref|YP_001677314.1| undecaprenyl pyrophosphate synthase [Francisella philomiragia
subsp. philomiragia ATCC 25017]
gi|167596815|gb|ABZ86813.1| Di-trans,poly-cis-decaprenylcistransferase [Francisella
philomiragia subsp. philomiragia ATCC 25017]
Length = 245
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/234 (39%), Positives = 134/234 (57%), Gaps = 1/234 (0%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S+ + + H+ IIMDGNGRWA +R PR GHR I + + E I+ LT+FAF
Sbjct: 2 SLANENALKHVAIIMDGNGRWAKSRLKPRIFGHRNSISSVDAAIEYCVERNIQMLTLFAF 61
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
+NW RP E+S+L+ L LK L NNI ++VIG+R L D ++ ++ +E
Sbjct: 62 GRDNWLRPAKEVSDLMDLFYKTLKDKTPKLHSNNIILKVIGDRSRLSDKLMQMIDYSESV 121
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NTGL L +A +Y R +I A+K+I DI +G + ++ Y +P D
Sbjct: 122 TKDNTGLQLRLAVDYGGRWDIISAVKSIIDDIGNGKIALDNISEDNFGSYTVAGQMP-VD 180
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
L+IRT GE RLSDF+LWQ++Y+E F WP+F++ F A + R RRFG
Sbjct: 181 LLIRTSGEIRLSDFMLWQLSYAEMYFTDLMWPEFTKSEFQKAEEYFYSRQRRFG 234
>gi|297571538|ref|YP_003697312.1| undecaprenyl diphosphate synthase [Arcanobacterium haemolyticum DSM
20595]
gi|296931885|gb|ADH92693.1| undecaprenyl diphosphate synthase [Arcanobacterium haemolyticum DSM
20595]
Length = 266
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 134/228 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ ++MDGNGRWA R LPR GHR G + +++A A E+G++ ++++AFS NW+R
Sbjct: 30 PKHVAVVMDGNGRWANERHLPRTEGHRAGEKALMDVLAGAVEIGVEVVSVYAFSTENWKR 89
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
SEI+ L+ + + + + L +K+ G + L ++ L+EA+ T N+ +
Sbjct: 90 SPSEIAFLMNYSRDVIHRRRHELDDWGVKIVWSGRQPRLWSSVIKELQEAQRLTMYNSTM 149
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L NY R EI+ A+ I G + ++ IA+ L +PD DL IR+GG
Sbjct: 150 TLNFCCNYGGRAEIADAVAEIAAAAARGEIKPRKINEETIAQALYQPHLPDVDLFIRSGG 209
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S+F+LWQ +Y+E +F+ E WP+F R + + + QY R+RRFGG
Sbjct: 210 EQRTSNFMLWQASYAEMMFVDEPWPEFDRNVLWRCIEQYASRNRRFGG 257
>gi|146310376|ref|YP_001175450.1| undecaprenyl pyrophosphate synthase [Enterobacter sp. 638]
gi|145317252|gb|ABP59399.1| Undecaprenyl pyrophosphate synthetase [Enterobacter sp. 638]
Length = 252
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/226 (38%), Positives = 136/226 (60%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA +G R GH+ G + V+ AA GI LT++AFS NW RP
Sbjct: 19 HVAIIMDGNGRWAKRQGKIRAFGHKAGAKSVRRAVSFAANNGIDALTLYAFSSENWNRPP 78
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E++ L++L L SL ++N+++R+IG+ + + +++AE T NTGL L
Sbjct: 79 QEVTALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKAEAVTENNTGLTL 138
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA NY R +I + ++++ + ++ G + +D + + + +++ DL+IRTGGE
Sbjct: 139 NIAANYGGRWDIIQGVRHLAEQVQEGLLRPDQIDEEALGQQICMNELAPVDLVIRTGGEH 198
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R+S+FLLWQ+AY+E F WPDF + F AL + R+RRFGG
Sbjct: 199 RISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALYAFANRERRFGG 244
>gi|260578244|ref|ZP_05846160.1| undecaprenyl diphosphate synthase [Corynebacterium jeikeium ATCC
43734]
gi|258603546|gb|EEW16807.1| undecaprenyl diphosphate synthase [Corynebacterium jeikeium ATCC
43734]
Length = 241
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/229 (37%), Positives = 133/229 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI ++MDGNGRWA RG+ R GHR+G V +V E+G+ L+ +AFS NWRR
Sbjct: 12 PKHIALVMDGNGRWAEERGMVRTEGHRRGEAVLMSLVEECIELGVDYLSAYAFSTENWRR 71
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + L++ L +++R +G R L ++ L++AE+ T+ NT +
Sbjct: 72 SADEVRFLMGFNRDVLRRQRDYLNSLGVRIRWVGRRPRLWRTVIAELEQAEELTKNNTTM 131
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R EI+ A + I +D+++G + V+ A+YLD D+PD DL +R G
Sbjct: 132 TLGMCVNYGGRAEIADAARWIAEDVKAGKLKPRQVNEKTFARYLDEPDMPDVDLFLRPSG 191
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R S+FL WQ Y+E V+ +PD++ A+ ++ RDRRFGG+
Sbjct: 192 EMRTSNFLPWQSTYAEMVYQDVLFPDYTPNHLRAAVLEFAKRDRRFGGV 240
>gi|16759211|ref|NP_454828.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|29140761|ref|NP_804103.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|213163134|ref|ZP_03348844.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
gi|213425947|ref|ZP_03358697.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213581509|ref|ZP_03363335.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
gi|213609347|ref|ZP_03369173.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
gi|213646663|ref|ZP_03376716.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213857438|ref|ZP_03384409.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|289825710|ref|ZP_06544878.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
gi|291080844|ref|ZP_06536504.2| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
gi|42559853|sp|Q8Z9A5|UPPS_SALTI RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|25314081|pir||AG0529 undecaprenyl pyrophosphate synthetase [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16501502|emb|CAD08679.1| undecaprenyl pyrophosphate synthetase [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29136385|gb|AAO67952.1| undecaprenyl pyrophosphate synthetase [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
Length = 252
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/244 (37%), Positives = 142/244 (58%), Gaps = 10/244 (4%)
Query: 5 MMSSSPP----------DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVG 54
M+S++ P H+ IIMDGNGRWA +G R GH+ G + V+ AA G
Sbjct: 1 MLSATQPVSENLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNG 60
Query: 55 IKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDIL 114
I LT++AFS NW RP E+S L++L L SL ++N+++R+IG+ + +
Sbjct: 61 IDALTLYAFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDISRFNSRLQ 120
Query: 115 CVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYL 174
++++E T NTGL L IA NY R +I + ++ + + +++G + +D + + +
Sbjct: 121 ERIRKSEALTAHNTGLTLNIAANYGGRWDIVQGVRQLAELVQAGVLRPDQIDEERLGQQI 180
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
++ DL+IRTGGE R+S+FLLWQ+AY+E F WPDF + F AL+ + R+R
Sbjct: 181 CMHELAPVDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALHAFANRER 240
Query: 235 RFGG 238
RFGG
Sbjct: 241 RFGG 244
>gi|126696537|ref|YP_001091423.1| undecaprenyl pyrophosphate synthetase [Prochlorococcus marinus str.
MIT 9301]
gi|126543580|gb|ABO17822.1| Undecaprenyl pyrophosphate synthetase (UPPS) [Prochlorococcus
marinus str. MIT 9301]
Length = 267
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 131/229 (57%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +GLPR GH++G+ V +I+ AA ++G K +T++AFS NW R
Sbjct: 24 PKHVAIIMDGNGRWATRKGLPRSFGHKQGVSVLKKILKAAKKLGCKVITVYAFSTENWTR 83
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L LK + + + K++ IG+ ++ ++ +E T+ N
Sbjct: 84 PSKEVDFLINLFSEVLKNEIDEIHEESTKIKFIGDLTPFPKNLKEIISSSESLTKNNNKF 143
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ NY R EI + K + SG + +++ L L T + DP+L+IRT G
Sbjct: 144 LFNVCVNYGGRQEIVKVAKELALKSSSGKIKPSEINEELFNSELLTRGIKDPELLIRTSG 203
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
EKR+S+FLLWQ+AYSE WPDF+ F A+ Y R+RRFGG+
Sbjct: 204 EKRISNFLLWQLAYSEIYISEVLWPDFNEHEFLKAIIDYQSRNRRFGGI 252
>gi|238763974|ref|ZP_04624930.1| Di-trans,poly-cis-decaprenylcistransferase [Yersinia kristensenii
ATCC 33638]
gi|238697791|gb|EEP90552.1| Di-trans,poly-cis-decaprenylcistransferase [Yersinia kristensenii
ATCC 33638]
Length = 252
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 137/235 (58%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+S P H+ IIMDGNGRWA +G R GH+ G++ V+ AA + LT++AFS
Sbjct: 11 LSPLTPRHVAIIMDGNGRWAKKQGKLRVFGHKAGVKSVRRAVSFAATHQLDALTLYAFSS 70
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E++ L++L L SL K+ +++ VIG+ + + ++ +E+ T
Sbjct: 71 ENWNRPAQEVTALMELFVHALDSEVKSLHKHKVRLSVIGDISRFSERLQKRIRRSEELTA 130
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N GL L IA NY R +I + ++++ + ++ G + D+ + ++ + + DL+
Sbjct: 131 NNDGLRLNIAANYGGRWDIIQGVRHLAEQVQRGELQPTDICEKSLNSHICLHEQSEVDLV 190
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IRTGGE R+S+FLLWQ+AY+E F WPDF +F ALN + R+RRFGG +
Sbjct: 191 IRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEHVFEGALNAFAQRERRFGGTT 245
>gi|68535682|ref|YP_250387.1| hypothetical protein jk0610 [Corynebacterium jeikeium K411]
gi|68263281|emb|CAI36769.1| uppS2 [Corynebacterium jeikeium K411]
Length = 249
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/229 (37%), Positives = 133/229 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI ++MDGNGRWA RG+ R GHR+G V +V E+G+ L+ +AFS NWRR
Sbjct: 20 PKHIALVMDGNGRWAKERGMVRTEGHRRGEAVLMSLVEECIELGVDYLSAYAFSTENWRR 79
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + L++ L +++R +G R L ++ L++AE+ T+ NT +
Sbjct: 80 SADEVRFLMGFNRDVLRRQRDYLNSLGVRIRWVGRRPRLWRSVIAELEQAEELTKNNTTM 139
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R EI+ A + I +D+++G + V+ A+YLD D+PD DL +R G
Sbjct: 140 TLGMCVNYGGRAEIADAARWIAEDVKAGRLKPRQVNEKTFARYLDEPDMPDVDLFLRPSG 199
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R S+FL WQ Y+E V+ +PD++ A+ ++ RDRRFGG+
Sbjct: 200 EMRTSNFLPWQSTYAEMVYQDVLFPDYTPNHLRAAVLEFAKRDRRFGGV 248
>gi|300858944|ref|YP_003783927.1| hypothetical protein cpfrc_01527 [Corynebacterium
pseudotuberculosis FRC41]
gi|300686398|gb|ADK29320.1| hypothetical protein cpfrc_01527 [Corynebacterium
pseudotuberculosis FRC41]
gi|302206645|gb|ADL10987.1| Undecaprenyl pyrophosphate synthase [Corynebacterium
pseudotuberculosis C231]
gi|302331194|gb|ADL21388.1| Undecaprenyl pyrophosphate synthase [Corynebacterium
pseudotuberculosis 1002]
gi|308276888|gb|ADO26787.1| Undecaprenyl pyrophosphate synthase [Corynebacterium
pseudotuberculosis I19]
Length = 245
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/228 (38%), Positives = 132/228 (57%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI ++MDGNGRWA RGL R GH++G V ++V A + I L+ +AFS NWRR
Sbjct: 16 PRHIALVMDGNGRWATQRGLKRTEGHKRGEAVLLDMVEACLAMKIPYLSAYAFSTENWRR 75
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + L++ L + ++VR G R L ++ L+ AE+ T+ NT +
Sbjct: 76 STDEVRFLMGFNRDVLQRQKERLHELGVRVRWAGRRPRLWRSVIKELESAEELTKNNTNM 135
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R EI A + I + G + D+ + +++LD D+PD DL +R G
Sbjct: 136 TLVMCVNYGGRAEIVDAAREIARLAAQGELRPQDITEASFSQFLDEPDMPDVDLFLRPSG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
EKR S+FLLWQ AY+E ++ + +PD++ + A+ +Y RDRRFGG
Sbjct: 196 EKRTSNFLLWQSAYAEMIYQNKLFPDYTARDLYCAVEEYARRDRRFGG 243
>gi|218888002|ref|YP_002437323.1| undecaprenyl diphosphate synthase [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218758956|gb|ACL09855.1| undecaprenyl diphosphate synthase [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 250
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/233 (40%), Positives = 131/233 (56%), Gaps = 4/233 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
++ + P H+ IIMDGNGRWA RGL R GHR G E IV +GI +LT++ FS
Sbjct: 15 LLPETLPRHVAIIMDGNGRWATQRGLSRSDGHRAGTEAARAIVTECRTLGIPHLTMYTFS 74
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP +E+ L +L+ FL++ +L + +I++ V G L L+ A +T
Sbjct: 75 KENWGRPGAEVKFLFELLVDFLREELPNLIQRDIRLSVFGQLSDLPLAARKALEHAISRT 134
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
T + L +A NYS+RDEI A + + + + + A L ++ PDPDL
Sbjct: 135 AACTTMRLNLALNYSARDEILMACRALAAE----GLAPEAITEEAFAARLWSAGQPDPDL 190
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+IRT GE R+S+FLL+Q AYSEF F WPDF+ E F AL Y R RRFG
Sbjct: 191 VIRTSGEVRISNFLLYQSAYSEFHFTDTLWPDFTPEHFRAALRDYAGRQRRFG 243
>gi|71892058|ref|YP_277788.1| undecaprenyl pyrophosphate synthetase [Candidatus Blochmannia
pennsylvanicus str. BPEN]
gi|71796164|gb|AAZ40915.1| undecaprenyl pyrophosphate synthetase [Candidatus Blochmannia
pennsylvanicus str. BPEN]
Length = 250
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/236 (38%), Positives = 133/236 (56%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+++ S+ P H+ IIMDGNGRWA RG R GH+ G V A LT++
Sbjct: 10 LSTFSSNLLPRHVAIIMDGNGRWARRRGKLRIVGHQAGFNAVRRAVHFAVNYRFDALTLY 69
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP EI L++L L L KNNIK+R+IG+ ++ + +E
Sbjct: 70 AFSSENWKRPDKEIDSLMQLFSHALNNEIDVLHKNNIKLRIIGDINRFSGELQKNIHRSE 129
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T N+GL L IA NY R +I + +K + ++ G + + +D + K + ++
Sbjct: 130 KLTSNNSGLTLNIAANYGGRWDIIQGVKQLATQVQQGILTPNQIDEDALCKCICMHELAP 189
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRTGGE R+S+FLLWQ+AY+E F WPDF+ +F A+N + R+RRFG
Sbjct: 190 VDLVIRTGGEHRISNFLLWQIAYAELFFTDVLWPDFNDVIFKRAVNTFMKRERRFG 245
>gi|306836626|ref|ZP_07469592.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
accolens ATCC 49726]
gi|304567456|gb|EFM43055.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
accolens ATCC 49726]
Length = 250
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/229 (37%), Positives = 133/229 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI ++MDGNGRWA +G+ R GHR+G V ++V A G+ L+ +AFS NWRR
Sbjct: 21 PRHIALVMDGNGRWAQEKGMKRTEGHRRGEAVLLDVVDACLAAGVPYLSAYAFSTENWRR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + L++ L + ++V +G R L ++ L+ AE+ T+ NT +
Sbjct: 81 SPEEVRFLMGFNRDVLRRQREWLHERGVRVVWVGRRPRLWRSVIKELEAAEELTKNNTKM 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R E+ ++ I + + +G + D+ S IA+ L +PD DL +R G
Sbjct: 141 TLAMCVNYGGRAEMVDGVRQIAEKVAAGEIRPRDIRESTIAENLYDPGMPDVDLFLRPSG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
EKR S+FLLWQ AY+E ++ + +PDF+ E F A+ +Y RDRRFG +
Sbjct: 201 EKRTSNFLLWQSAYAEMIYQDKLFPDFTPEDLFAAIEEYARRDRRFGAV 249
>gi|319897593|ref|YP_004135790.1| undecaprenyl pyrophosphate synthase [Haemophilus influenzae F3031]
gi|317433099|emb|CBY81473.1| undecaprenyl pyrophosphate synthase [Haemophilus influenzae F3031]
Length = 223
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/221 (40%), Positives = 130/221 (58%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA + R GH G+ + VA A ++G++ LT++AFS NW RP EIS
Sbjct: 1 MDGNGRWAKQKNKMRIFGHTNGVTAVRKAVAYARQIGVEVLTLYAFSSENWSRPEQEISA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ L L + L KNNI +++IG+ + + +K+AE+ T NT L L IA N
Sbjct: 61 LMSLFMQALDREVKKLHKNNICLKIIGDVSRFSETLQEKIKKAENLTEKNTALTLNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y +I +A K I + ++ + D+++S +L T + P DL+IRT GE+R+S+F
Sbjct: 121 YGGCWDIIQAAKQIAEKVKKEEMSVSDINNSTFQHHLATQNAPPVDLLIRTSGEQRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
LLWQ+AY+E F WPDF++ F A+ Y R RRFGG
Sbjct: 181 LLWQIAYAELYFSDVLWPDFNQLEFNRAIASYQQRHRRFGG 221
>gi|241667395|ref|ZP_04754973.1| di-trans,poly-cis-decaprenylcistransferase [Francisella
philomiragia subsp. philomiragia ATCC 25015]
gi|254875944|ref|ZP_05248654.1| undecaprenyl pyrophosphate synthetase [Francisella philomiragia
subsp. philomiragia ATCC 25015]
gi|254841965|gb|EET20379.1| undecaprenyl pyrophosphate synthetase [Francisella philomiragia
subsp. philomiragia ATCC 25015]
Length = 245
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/234 (39%), Positives = 134/234 (57%), Gaps = 1/234 (0%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S+ + + H+ IIMDGNGRWA +R PR GHR I + + E I+ LT+FAF
Sbjct: 2 SLANENALKHVAIIMDGNGRWAKSRLKPRIFGHRNSISSVDAAIEYCVERNIQMLTLFAF 61
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
+NW RP E+S+L+ L LK L NNI ++VIG+R L D ++ ++ +E
Sbjct: 62 GRDNWLRPAKEVSDLMDLFYKTLKDKTPKLHSNNIVLKVIGDRSRLSDKLIQMIDYSESV 121
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NTGL L +A +Y R +I A+K+I DI +G + ++ Y +P D
Sbjct: 122 TKDNTGLQLRLAVDYGGRWDIISAMKSIIDDIGNGKIALDNISEDNFGSYTVAGQMP-VD 180
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
L+IRT GE RLSDF+LWQ++Y+E F WP+F++ F A + R RRFG
Sbjct: 181 LLIRTSGEIRLSDFMLWQLSYAEMYFTDLMWPEFTKSEFQKAEEYFYSRQRRFG 234
>gi|170760590|ref|YP_001786188.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum
A3 str. Loch Maree]
gi|169407579|gb|ACA55990.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum
A3 str. Loch Maree]
Length = 239
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/220 (40%), Positives = 132/220 (60%), Gaps = 1/220 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI I+ DGNGRWA +G PR GH+ G + I +E+G++ LT + FS NW R
Sbjct: 17 PKHIAIVCDGNGRWAKKKGFPRTFGHKAGTKPIENITKICSELGVEVLTFYVFSTENWNR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+KL F K + +N I+V+ IG + +L +++ +K+ E T N G+
Sbjct: 77 PDEEVNFLMKLFVEFFIKLRNEVGQN-IRVKHIGIKNNLSSELIDEIKKTESLTESNPGM 135
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY SR EI A KNI D++ G++ + +++ L + Y+ TS +PD DLIIRT G
Sbjct: 136 ILNIALNYGSRLEIINAAKNIMHDMDVGNLNADEMNEDLFSNYMSTSGLPDVDLIIRTSG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
E R+S+FLLWQ ++ F ++WPDF + A+ YN
Sbjct: 196 EIRISNFLLWQSIKAKLWFTDDFWPDFKYDHLKQAIRHYN 235
>gi|66766333|dbj|BAD99031.1| undecaprenyl diphosphate synthase [Desulfovibrio vulgaris]
Length = 237
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/233 (40%), Positives = 131/233 (56%), Gaps = 4/233 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
++ + P H+ IIMDGNGRWA RGL R GHR G E IV +GI +LT++ FS
Sbjct: 2 LLPETLPRHVAIIMDGNGRWATQRGLSRSDGHRAGTEAARAIVTECRTLGIPHLTMYTFS 61
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP +E+ L +L+ FL++ +L + +I++ V G L L+ A +T
Sbjct: 62 KENWGRPGAEVKFLFELLVDFLREELPNLIQRDIRLSVFGQLSDLPLAARKALEHAISRT 121
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
T + L +A NYS+RDEI A + + + + + A L ++ PDPDL
Sbjct: 122 AACTTMRLNLALNYSARDEILMACRALAAE----GLAPEAITEEAFAARLWSAGQPDPDL 177
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+IRT GE R+S+FLL+Q AYSEF F WPDF+ E F AL Y R RRFG
Sbjct: 178 VIRTSGEVRISNFLLYQSAYSEFHFTDTLWPDFTPEHFRAALRDYAGRQRRFG 230
>gi|300824103|ref|ZP_07104223.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
119-7]
gi|300900788|ref|ZP_07118932.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
198-1]
gi|300920144|ref|ZP_07136595.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
115-1]
gi|300923034|ref|ZP_07139101.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
182-1]
gi|300949794|ref|ZP_07163768.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
116-1]
gi|300984934|ref|ZP_07177199.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
200-1]
gi|300993605|ref|ZP_07180461.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
45-1]
gi|301049913|ref|ZP_07196838.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
185-1]
gi|301330028|ref|ZP_07222712.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
78-1]
gi|312966310|ref|ZP_07780536.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
2362-75]
gi|300298342|gb|EFJ54727.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
185-1]
gi|300306584|gb|EFJ61104.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
200-1]
gi|300355737|gb|EFJ71607.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
198-1]
gi|300406528|gb|EFJ90066.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
45-1]
gi|300412841|gb|EFJ96151.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
115-1]
gi|300420661|gb|EFK03972.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
182-1]
gi|300450826|gb|EFK14446.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
116-1]
gi|300523380|gb|EFK44449.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
119-7]
gi|300843939|gb|EFK71699.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
78-1]
gi|312289553|gb|EFR17447.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
2362-75]
gi|313646766|gb|EFS11225.1| di-trans,poly-cis-decaprenylcistransferase [Shigella flexneri 2a
str. 2457T]
gi|315285259|gb|EFU44704.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
110-3]
gi|315294578|gb|EFU53925.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
153-1]
gi|315300678|gb|EFU59905.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
16-3]
gi|324008236|gb|EGB77455.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
57-2]
gi|324014108|gb|EGB83327.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
60-1]
gi|325496106|gb|EGC93965.1| undecaprenyl pyrophosphate synthase [Escherichia fergusonii ECD227]
gi|327255153|gb|EGE66756.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
STEC_7v]
gi|332097603|gb|EGJ02580.1| di-trans,poly-cis-decaprenylcistransferase [Shigella dysenteriae
155-74]
Length = 229
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/221 (38%), Positives = 135/221 (61%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA +G R GH+ G + V+ AA GI+ LT++AFS NW RP E+S
Sbjct: 1 MDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPAQEVSA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L L SL ++N+++R+IG+ + + ++++E T NTGL L IA N
Sbjct: 61 LMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTLNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I + ++ + + ++ G++ +D ++ +++ ++ DL+IRTGGE R+S+F
Sbjct: 121 YGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGEHRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
LLWQ+AY+E F WPDF + F ALN + R+RRFGG
Sbjct: 181 LLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGG 221
>gi|262203042|ref|YP_003274250.1| undecaprenyl diphosphate synthase [Gordonia bronchialis DSM 43247]
gi|262086389|gb|ACY22357.1| undecaprenyl diphosphate synthase [Gordonia bronchialis DSM 43247]
Length = 276
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 134/232 (57%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ ++MDGNGRWA RGLPR GH++G V + V E+G+ L+ +AFS NW R
Sbjct: 45 PRHVALVMDGNGRWATDRGLPRTEGHKRGEAVLMDTVCGCIELGVTWLSAYAFSTENWSR 104
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ + + ++VR G R L ++ L+ AE+ TR NT +
Sbjct: 105 SPDEVRFLMGFNRDVIRRRRDEMNEMGVRVRWAGRRPRLWRSVIRELEVAEELTRDNTVM 164
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R EI+ A + I + G + + S A+YLD D+PD DL +R G
Sbjct: 165 TLTMCVNYGGRAEIADAAREIARRAARGEIDPERISESTFARYLDEPDMPDVDLFLRPSG 224
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FLLWQ AY+E V+ + +PDF R + A +Y RDRRFGG+ +
Sbjct: 225 EQRISNFLLWQSAYAEMVYQEKLFPDFDRRDLWAACLEYASRDRRFGGVKPQ 276
>gi|194446733|ref|YP_002039461.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194405396|gb|ACF65618.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
Length = 252
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/244 (37%), Positives = 141/244 (57%), Gaps = 10/244 (4%)
Query: 5 MMSSSPP----------DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVG 54
M+S++ P H+ IIMDGNGRWA +G R GH+ G + V+ AA G
Sbjct: 1 MLSATQPVSENLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNG 60
Query: 55 IKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDIL 114
I LT++AFS NW RP E+S L++L L SL ++N+++R+IG+ + +
Sbjct: 61 IDALTLYAFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDISRFNSRLQ 120
Query: 115 CVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYL 174
++++E T NTGL L IA NY R +I + ++ + + + +G + +D + + +
Sbjct: 121 ERIRKSEALTAHNTGLTLNIAANYGGRWDIVQGVRQLAEQVLAGVLRPDQIDEERLGQQI 180
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
++ DL+IRTGGE R+S+FLLWQ+AY+E F WPDF + F AL+ + R+R
Sbjct: 181 CMHELAPVDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALHAFANRER 240
Query: 235 RFGG 238
RFGG
Sbjct: 241 RFGG 244
>gi|301025946|ref|ZP_07189430.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
69-1]
gi|300395745|gb|EFJ79283.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
69-1]
Length = 229
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/221 (38%), Positives = 134/221 (60%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA +G R GH+ G + V+ AA GI+ LT++AFS NW RP E+S
Sbjct: 1 MDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPAQEVSA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L L SL ++N+++R+IG+ + + ++++E T NTGL L IA N
Sbjct: 61 LMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTLNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I + ++ + + ++ G + +D ++ +++ ++ DL+IRTGGE R+S+F
Sbjct: 121 YGGRWDIVQGVRQLAEKVQQGKLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGEHRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
LLWQ+AY+E F WPDF + F ALN + R+RRFGG
Sbjct: 181 LLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGG 221
>gi|260890535|ref|ZP_05901798.1| hypothetical protein GCWU000323_01713 [Leptotrichia hofstadii
F0254]
gi|260859777|gb|EEX74277.1| undecaprenyl diphosphate synthase [Leptotrichia hofstadii F0254]
Length = 269
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/261 (36%), Positives = 139/261 (53%), Gaps = 29/261 (11%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA RG R GHR G +I+ A ++G+K LT++AFS NW+R
Sbjct: 9 PGHIAIIMDGNGRWAKERGKIRLEGHRAGANSLEKILKYAGDIGVKYLTVYAFSTENWKR 68
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L +L K +LKK +++ V G++ ++ +L ++E E+ +
Sbjct: 69 PEKEVKGLMDLFAKYLDKEKKNLKKQGVRLLVTGSKENISQKLLKKIEETENYLADCNKI 128
Query: 131 NLFIAFNYSSRDEISRAIK--------------------------NIFQDIESGSVCSHD 164
IAFNY R EI A+ N+ + + +G +
Sbjct: 129 IFNIAFNYGGRREIIDAVNKVLHTKLSSESNVTVKEQLNNENKGSNVLEKVVNGFANKKE 188
Query: 165 ---VDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSREL 221
+ +K++ ++PDP+L+IRT GE R+S+FLLW+VAYSEF YWPDF
Sbjct: 189 NLKITEEEFSKFMYRPEIPDPELVIRTSGEFRISNFLLWEVAYSEFYITDVYWPDFDENE 248
Query: 222 FFHALNQYNLRDRRFGGLSKK 242
A+ +N RDRR+GGL+ K
Sbjct: 249 LDKAILSFNKRDRRYGGLNVK 269
>gi|153006544|ref|YP_001380869.1| undecaprenyl diphosphate synthase [Anaeromyxobacter sp. Fw109-5]
gi|152030117|gb|ABS27885.1| undecaprenyl diphosphate synthase [Anaeromyxobacter sp. Fw109-5]
Length = 255
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 131/227 (57%), Gaps = 6/227 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA ARGLPR GHR+G E + A +G++ LT++AFS NW R
Sbjct: 25 PRHVAIIMDGNGRWAEARGLPRVLGHREGSEAVRAVTRTARRIGVQALTLYAFSSENWAR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L+ FL+ + +N I++ IG+ L D + L +T NT +
Sbjct: 85 PDEEVGALMSLLAEFLESERAEMMRNGIRLNAIGDLERLPDVVREKLASVRAETTGNTAM 144
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y R +I +A + + + + + D++++L T+ +P+ DL++RT G
Sbjct: 145 TLTLALSYGGRQDIVQAARRAAAE-KGPAFEAEDLEAALW-----TAGLPELDLLVRTSG 198
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+R+S+FLLWQ AY+E F WPDF A+ + R+RRFG
Sbjct: 199 ERRISNFLLWQCAYAELHFSEVLWPDFRERELLLAIRDFQGRERRFG 245
>gi|260434697|ref|ZP_05788667.1| undecaprenyl pyrophosphate synthetase 1 [Synechococcus sp. WH 8109]
gi|260412571|gb|EEX05867.1| undecaprenyl pyrophosphate synthetase 1 [Synechococcus sp. WH 8109]
Length = 260
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 136/229 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA +RGLPR GHR G+E + ++ GI+ LT +AFS NW R
Sbjct: 27 PQHVALIMDGNGRWAKSRGLPRVMGHRAGVEALKATLRLCSDWGIQALTAYAFSTENWSR 86
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L + L+ +L+ +++R +G+ +L + ++ +A +T N G+
Sbjct: 87 PGEEVNFLMTLFERVLQAELQALEAEQVRIRFLGDLKALPQKLQELIADATARTAGNNGI 146
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ + NY R E+ +A + + Q +G + ++D + IA L T+ DPDL+IRT G
Sbjct: 147 HFNVCTNYGGRRELVQAAQRLAQRAAAGELDPDNIDENSIAAELFTAGEQDPDLLIRTSG 206
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+FLLWQ+AY+E WPDF+ + AL + R RRFGGL
Sbjct: 207 EHRISNFLLWQLAYAEIHVTDVLWPDFNADALKAALLDFQRRHRRFGGL 255
>gi|315453570|ref|YP_004073840.1| undecaprenyl pyrophosphate synthetase [Helicobacter felis ATCC
49179]
gi|315132622|emb|CBY83250.1| undecaprenyl pyrophosphate synthetase [Helicobacter felis ATCC
49179]
Length = 226
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/225 (38%), Positives = 129/225 (57%), Gaps = 6/225 (2%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA +G PR GH++GI +I A+ I LT++AFS NW RP
Sbjct: 6 HLAIIMDGNGRWAKQQGKPRTHGHQQGINALRKITIWCAQNHIAYLTLYAFSTENWSRPK 65
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+E+ L++++K +L + + ++ I+ + IGN + + E +T +T L
Sbjct: 66 TEVDFLMRMLKKYLLQERPTYLEHKIRFKAIGNLKKFSSALQKTILNLEQETAKHTALTQ 125
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A NY RDEI+RA + + G + LI ++LDT+ +PD DL++RTGGE
Sbjct: 126 ILALNYGGRDEIARACGRVLELGLKGDL------QELIGRHLDTAGLPDVDLLVRTGGEM 179
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RLS+FLLWQ Y+E F P WPDF+ + + + R R+FG
Sbjct: 180 RLSNFLLWQSNYAELFFSPVLWPDFTPQHLQEIIKIFKQRQRKFG 224
>gi|308064000|gb|ADO05887.1| undecaprenyl pyrophosphate synthase [Helicobacter pylori Sat464]
Length = 234
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/227 (38%), Positives = 137/227 (60%), Gaps = 1/227 (0%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 7 HLAIIMDGNGRWAKLKNKARVYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPK 66
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
SE+ L+K++K +LK + NNI+ R IG+ ++ + + E+ TR
Sbjct: 67 SEVDFLMKMLKKYLKDERSTYLDNNIRFRAIGDLEGFSKELRETILQLENDTRHFKDFTQ 126
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A NY S++E+SRA K++ + S + +++ I+ LDT D+P+ DL++RTGGE
Sbjct: 127 VLALNYGSKNELSRAFKSLLESPPSNTSFLESLENE-ISNRLDTRDLPEVDLLLRTGGEM 185
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 186 RLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 232
>gi|295313587|ref|ZP_06804176.1| undecaprenyl pyrophosphate synthase [Francisella tularensis subsp.
holarctica URFT1]
Length = 225
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/225 (40%), Positives = 136/225 (60%), Gaps = 1/225 (0%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA +R PR GHR + + + E I+ LT+FAF +NW RP E+S+
Sbjct: 1 MDGNGRWAKSRLKPRIFGHRNSVSSVDATIEYCVENNIEMLTLFAFGRDNWLRPAQEVSD 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ L LK L NNI V V+G+R L + ++ +++ +E T+ NTGL L +A +
Sbjct: 61 LMDLFYKTLKDKTPKLHDNNIVVTVVGDRSRLSNKLIGMIEYSESLTKSNTGLKLRLAVD 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y+ R +I A + I ++++ G + ++D + AKYL ++P DL+IRT GE RLSDF
Sbjct: 121 YAGRWDIVEATRAIAREVDIGKLSVDEIDQNSFAKYLVGGNMP-VDLLIRTSGEVRLSDF 179
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+LWQ+AY+E F WPDFS++ A+ + R RRFG + ++
Sbjct: 180 MLWQLAYAEMYFTDIMWPDFSKQELTRAVEYFYSRQRRFGKIGEQ 224
>gi|227486435|ref|ZP_03916751.1| undecaprenyl diphosphate synthase [Anaerococcus lactolyticus ATCC
51172]
gi|227235616|gb|EEI85631.1| undecaprenyl diphosphate synthase [Anaerococcus lactolyticus ATCC
51172]
Length = 231
Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/235 (38%), Positives = 134/235 (57%), Gaps = 4/235 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M P+HI I++DGNGRWA + PR +GH++G E I A + G+K +T++AFS
Sbjct: 1 MTELKIPNHIAIVLDGNGRWAKKQNRPRTSGHKEGAENVVRIAKACKKFGVKTITLYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP +E+ L+ L+ F+ L + K+ +G+ L + A++ T
Sbjct: 61 TENWKRPATEVGFLMDLLIKFVNSKLKELIDEDCKLNFLGDLSKLPEKTRESCTYAKEIT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ N L + IA NY RDEI + K I IE G D+ LI+ L T+ + DPDL
Sbjct: 121 KDNKSLTVNIALNYGGRDEIVHSFKQI---IEKG-YGKDDITEELISDNLYTAGLSDPDL 176
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IR GGE RLS+FL++Q+AY+E F WPDF+ + A+ Y RDRR+GG+
Sbjct: 177 LIRPGGEIRLSNFLIYQLAYTELYFTDVLWPDFTEDDLREAIIAYTKRDRRYGGI 231
>gi|260903904|ref|ZP_05912226.1| undecaprenyl diphosphate synthase [Brevibacterium linens BL2]
Length = 258
Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/228 (37%), Positives = 128/228 (56%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ ++MDGNGRWA RGLPR GH+ G E++ A E+G+ L+ +AFS NW+R
Sbjct: 24 PNHVAVVMDGNGRWANDRGLPRTEGHKAGEASLLEVIHGAIEMGVDYLSAYAFSTENWKR 83
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ L +++ G R L ++ L+ A + T+ NTGL
Sbjct: 84 SPDEVRFLMGFNRDVIRRRRDELNALGVRIVWAGRRGRLWRSVIDELETAAEMTKHNTGL 143
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L NY R EI A+ I ++ +G + V + L ++VPD DL +R+ G
Sbjct: 144 VLQFCVNYGGRSEIVDAVNQITAEVAAGKLKPGKVSEKTVRSRLYAAEVPDVDLFLRSSG 203
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S+FLLWQ AY+E VF WPD R + A+ +Y RDRRFGG
Sbjct: 204 EQRTSNFLLWQSAYAEMVFQDVLWPDVDRRTLWSAIEEYARRDRRFGG 251
>gi|304414210|ref|ZP_07395578.1| undecaprenyl pyrophosphate synthase [Candidatus Regiella
insecticola LSR1]
gi|304283424|gb|EFL91820.1| undecaprenyl pyrophosphate synthase [Candidatus Regiella
insecticola LSR1]
Length = 256
Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/240 (37%), Positives = 136/240 (56%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A + P H+ IIMDGNGRWA + R GH+ GI+ V+ AA+ G+ LT+
Sbjct: 8 QTACSFPAPRPRHVAIIMDGNGRWAKNKCKMRVYGHKAGIKSVRRAVSFAAKHGLDALTL 67
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NWRRP +E++ L++L L+ +L KNNI + +IG+ + + A
Sbjct: 68 YAFSSENWRRPATEVTALLELFVWALRHEVKNLHKNNICLHIIGDTSQFSTSLQDHITRA 127
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E T N GL L IA NY R +I ++++ + + ++ G + +++ L+ + +
Sbjct: 128 EALTAKNDGLKLNIAANYGGRWDIIQSVRQLARQVQEGLLQPEELNEELLDSCICLNTQS 187
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRTGG R+S+FLLWQ AY+E F WPDF F AL ++ R+RRFGGLS
Sbjct: 188 PIDLVIRTGGNHRISNFLLWQTAYAELYFTDILWPDFDEPAFETALEEFARRERRFGGLS 247
>gi|227357245|ref|ZP_03841602.1| Di-trans,poly-cis-decaprenylcistransferase [Proteus mirabilis ATCC
29906]
gi|227162508|gb|EEI47497.1| Di-trans,poly-cis-decaprenylcistransferase [Proteus mirabilis ATCC
29906]
Length = 233
Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/225 (38%), Positives = 137/225 (60%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA +G R GHR GI+ + V+ + + I++LT++AFS NW RP E+S
Sbjct: 1 MDGNGRWAKKQGKLRVTGHRAGIKAVRDAVSFSVKHKIESLTLYAFSSENWNRPEQEVSS 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L L SL K+N+++ +IG+ + +K + T NTGLNL IA N
Sbjct: 61 LMELFVFALDNEVKSLHKHNVRLTIIGDISRFSRRLQDRIKNSVALTANNTGLNLNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I+++++ + + G + D++ + I+ +L D DL+IRTGGE R+S+F
Sbjct: 121 YGGRWDITQSVQQLASSLAKGELAIEDINENAISSHLCLHDQSPVDLVIRTGGEHRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+WQ+AY+E F WPDF ++F +AL+ + R+RRFGG + +
Sbjct: 181 LIWQIAYAELYFTQVLWPDFDEQVFQNALDAFAKRERRFGGTTSE 225
>gi|284044966|ref|YP_003395306.1| undecaprenyl diphosphate synthase [Conexibacter woesei DSM 14684]
gi|283949187|gb|ADB51931.1| undecaprenyl diphosphate synthase [Conexibacter woesei DSM 14684]
Length = 230
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 93/227 (40%), Positives = 129/227 (56%), Gaps = 12/227 (5%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ II DGNGRWAA RGL GHR G E + A E+GI+ L I+AFS NW R
Sbjct: 12 HVAIITDGNGRWAAQRGLDVTEGHRAGAENVKARLRDAVELGIEQLAIYAFSTENWVRSP 71
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS-LDDDILCVLKEAEDQTRLNTGLN 131
E++ L++L + ++ + L + +++R IG R + DI+ ++ AE T NT +
Sbjct: 72 DEVAGLMELFREYIARETPELHEEGVRMRFIGRRSDPVPPDIVEQMEWAEQLTADNTQIT 131
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
FI FNY R EI A ++ +G+ +L D+ DP+L+IRT GE
Sbjct: 132 FFIPFNYGGRAEIVDAARSF-----TGTTEEE------FRAHLYAPDLHDPELVIRTSGE 180
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+RLS++L+WQ AYSE VF E WPDF R F L Q+ R+RRFGG
Sbjct: 181 QRLSNYLVWQTAYSELVFRDELWPDFDRAAFEQTLEQFAARERRFGG 227
>gi|184200937|ref|YP_001855144.1| undecaprenyl pyrophosphate synthase [Kocuria rhizophila DC2201]
gi|183581167|dbj|BAG29638.1| undecaprenyl pyrophosphate synthase [Kocuria rhizophila DC2201]
Length = 263
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 87/228 (38%), Positives = 134/228 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ ++MDGNGRWA RGLPR GHR G ++VA A ++GI ++ +AFS NW+R
Sbjct: 25 PRHVALVMDGNGRWANERGLPRTEGHRAGERALMDVVAGAIDLGIPYVSAYAFSTENWKR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
SE++ L+ + + + ++ I++R G R L ++ L+ AE +T+ NT L
Sbjct: 85 SPSEVAFLMNFTGDVMARQLLTFQEWGIRIRWAGRRPRLWGSVIKRLETAERETQDNTVL 144
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R EI+ A + +D G + + + +YLD +PD D+ +R+ G
Sbjct: 145 TLTMCVNYGGRAEIADAAAAMARDAREGRLKPGSITEDTVQQYLDEPTLPDVDMFLRSSG 204
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+RLS+F+LWQ AY+E VF+ WPD R + + A+ Y RDRR+GG
Sbjct: 205 EQRLSNFMLWQSAYAELVFLDVLWPDMDRRVLWQAVQDYVERDRRYGG 252
>gi|289662903|ref|ZP_06484484.1| undecaprenyl pyrophosphate synthase [Xanthomonas campestris pv.
vasculorum NCPPB702]
Length = 253
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 133/232 (57%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R PR GHR G N + E G+ LT+FAFS NW R
Sbjct: 11 PRHIAIIMDGNGRWAQRRRRPRVIGHRAGARAVNRTIDFCLEKGVSALTLFAFSSENWGR 70
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL L + L++ ++VR IG+R + + AE T N+ L
Sbjct: 71 PQDEVDALMKLFLHVLDREVEELQRRGVQVRFIGDRSRFAAPLRDRMAGAERSTAANSRL 130
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA +Y R +I+ A + + +D+ +G + +D +L++ + +D+P PDL IRTGG
Sbjct: 131 VLSIAASYGGRQDIAAAARALAEDVAAGRLQPEQIDEALLSSRVALADLPAPDLFIRTGG 190
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+ R+S+FLLWQ+AY+E F WP+F + AL+ Y R+RRFG S +
Sbjct: 191 DTRISNFLLWQLAYTELWFTETLWPEFDAGVLQQALDDYAGRERRFGLTSAQ 242
>gi|150021159|ref|YP_001306513.1| undecaprenyl diphosphate synthase [Thermosipho melanesiensis BI429]
gi|149793680|gb|ABR31128.1| undecaprenyl diphosphate synthase [Thermosipho melanesiensis BI429]
Length = 225
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 91/228 (39%), Positives = 127/228 (55%), Gaps = 6/228 (2%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
HI IMDGNGRWA R PR GH G E+V A+ G+K T +AFS NW+RP
Sbjct: 4 HIAFIMDGNGRWAQKRNKPRMYGHYVGAYKIEEVVRWCAKRGVKYTTFYAFSTENWKRPK 63
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E++ + L++S + + + + K +K+ G L +I + KE E++T+ N + +
Sbjct: 64 GEVNFIFGLLQSKISEFYERMNKEGVKLVFSGRLEELGKNIYNICKEYEEKTKNNEKIVV 123
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A NY R EI A+K + + ++D K+L +VPDPDLIIRT GE
Sbjct: 124 NMAINYGGRAEIVDAVKKFLEQRQK------EIDEETFRKFLYRPEVPDPDLIIRTSGEM 177
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RLS+FL WQ AYSE F WPDFS + AL Y R+R+FGG+
Sbjct: 178 RLSNFLTWQSAYSELYFTDVLWPDFSEDDLQKALEDYEKRNRKFGGIK 225
>gi|317051360|ref|YP_004112476.1| undecaprenyl diphosphate synthase [Desulfurispirillum indicum S5]
gi|316946444|gb|ADU65920.1| undecaprenyl diphosphate synthase [Desulfurispirillum indicum S5]
Length = 242
Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 133/227 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+GIIMDGNGRWA RG+ R GH +G+EV IV A I +T++AFS NW R
Sbjct: 15 PRHLGIIMDGNGRWAQQRGMERIEGHARGMEVARTIVTYLARRHIPYVTLYAFSTENWNR 74
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
+E++ L +KS+L++ + +NNI+ R IG +++ +++EAE+++ NTG
Sbjct: 75 DAAEVAFLNLALKSYLEEEMPIMMENNIRFRAIGTIDRFSSELVRLIREAEERSASNTGT 134
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y + E+ +++NI + G + D+ + ++ ++ + D I+RT G
Sbjct: 135 TLVLAISYGGQQEVVDSVRNIGNKLLQGHMKLEDISIQTLLEHCYFPELGECDYIVRTSG 194
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E RLS+FL +Q AYSE F P WPDF+ AL + R RRFG
Sbjct: 195 EMRLSNFLTFQSAYSELYFTPTLWPDFTETEMAAALEDFTRRTRRFG 241
>gi|91199672|emb|CAI78027.1| putative undecaprenyl pyrophosphate synthetase [Streptomyces
ambofaciens ATCC 23877]
gi|96771719|emb|CAI78301.1| putative undecaprenyl pyrophosphate synthetase [Streptomyces
ambofaciens ATCC 23877]
gi|114049941|emb|CAK50958.1| putative undecaprenyl pyrophosphate synthetase [Streptomyces
ambofaciens]
gi|114050163|emb|CAK51196.1| putative undecaprenyl pyrophosphate synthetase [Streptomyces
ambofaciens]
gi|117164264|emb|CAJ87806.1| putative undecaprenyl pyrophosphate synthetase [Streptomyces
ambofaciens ATCC 23877]
gi|126347376|emb|CAJ89084.1| putative undecaprenyl pyrophosphate synthetase [Streptomyces
ambofaciens ATCC 23877]
Length = 239
Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 135/233 (57%), Gaps = 11/233 (4%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +MDGNGRWA R LPR GHR + + AA G++ L+++AFS NW R
Sbjct: 5 PRHVACVMDGNGRWAQRRSLPRTDGHRAAETTVIDTIEAARAAGVEWLSLYAFSTENWNR 64
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL-KEAEDQTRL--- 126
P E++ L++L++ ++K L I+ R +G + D I L ++ ED T L
Sbjct: 65 PGPEVAFLMRLVRRVVRKHAPLLLARGIRCRFLG---AADPRIPRELARDFEDLTTLTAG 121
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N G+ L +AF++ R +I A +++ + G + +V L A +L D PD DL+I
Sbjct: 122 NRGMTLTVAFDHGGRRDIVEAARSLIR----GGTAAEEVTEQLFADHLPFPDTPDVDLVI 177
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE+R+S+F+LWQVAY+E+VF WPDF F L+ Y RDRRFGG+
Sbjct: 178 RTSGEQRISNFMLWQVAYAEWVFPEVLWPDFRASDFLACLHTYRCRDRRFGGV 230
>gi|220903795|ref|YP_002479107.1| undecaprenyl diphosphate synthase [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219868094|gb|ACL48429.1| undecaprenyl diphosphate synthase [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 280
Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 96/232 (41%), Positives = 132/232 (56%), Gaps = 4/232 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA AR LPR AGH+ G E +V +GI++LT++ FS NW R
Sbjct: 49 PVHLAIIMDGNGRWAQARNLPREAGHKAGAEAVRAVVTECRRLGIRHLTLYTFSSENWNR 108
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +EIS L L+ FL++ L++ I +RV+G+ L L+ A +T +
Sbjct: 109 PKAEISALFSLLLEFLRRELPRLEEQGIALRVLGDLDGLPLAQRTALRHAIKRTADGPHM 168
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY SR E+ RA+++ D D+ +A+ L T+ PDPDL+IRT G
Sbjct: 169 VLNLALNYGSRAELVRAMRSFLHD----GARPEDITEESLAQRLYTAGQPDPDLLIRTSG 224
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+RLS++LL+Q AYSE F WPDF AL Y R RRFG ++
Sbjct: 225 EQRLSNYLLYQCAYSELYFTQVAWPDFDAAQLRLALEAYAARSRRFGKTQEQ 276
>gi|327187690|dbj|BAK09180.1| Z-prenyltransferase 2 [Mycobacterium chlorophenolicum]
Length = 298
Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 132/227 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ ++MDGNGRWA RGL R GH+ G V +I A E+GIK+LT++AFS NW+R
Sbjct: 70 PQHVAVVMDGNGRWATQRGLGRTEGHKMGEAVLIDITCGAIELGIKHLTVYAFSTENWKR 129
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ +L +++R +G+R + ++ AE+ T N +
Sbjct: 130 STDEVRFLMGFNREVVRRRRENLNDMGVRMRWVGSRPRMWRSVIKEFDIAEEMTVDNDVI 189
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ NY R EI A + + Q+ G + + + AK+L +D+PD L IRT G
Sbjct: 190 TINYCVNYGGRTEIVEAARQLAQEAVDGKINPARISEASFAKHLHRADIPDVGLFIRTSG 249
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+R S+FLLWQVAY+E+VF + WPD+ R + A +Y R+RRFG
Sbjct: 250 EQRASNFLLWQVAYAEYVFQDKLWPDYDRRDLWAACEEYVHRNRRFG 296
>gi|284030391|ref|YP_003380322.1| undecaprenyl diphosphate synthase [Kribbella flavida DSM 17836]
gi|283809684|gb|ADB31523.1| undecaprenyl diphosphate synthase [Kribbella flavida DSM 17836]
Length = 274
Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 83/228 (36%), Positives = 131/228 (57%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I+MDGNGRWA ARGL R GH+ G +++ E+G+K ++ +AFS NW R
Sbjct: 39 PQHVAIVMDGNGRWAKARGLARTEGHKAGEASLLDVIKGGIEIGVKYISAYAFSTENWAR 98
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + + + L ++V G R L ++ L+ A+++T+ NT +
Sbjct: 99 SPEEVRFLMGFNRDVIHRRRDELDAMGVRVVWSGRRPRLWKSVIDELEYAQERTKDNTTI 158
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L NY R EI+ A+K I D+ +G + + + +A+ L +P+ DL +R+ G
Sbjct: 159 TLQFCVNYGGRAEIADAMKAIAHDVAAGRIKPDRITEATVARNLYAPGIPEVDLFVRSSG 218
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S+FL+WQ+AY+E VF+ WPDF R + A+ Y RDRR+GG
Sbjct: 219 EQRTSNFLVWQLAYAEMVFLDTLWPDFDRRDLWRAIEIYAQRDRRYGG 266
>gi|167009897|ref|ZP_02274828.1| di-trans,poly-cis-decaprenylcistransferase [Francisella tularensis
subsp. holarctica FSC200]
Length = 225
Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 90/220 (40%), Positives = 133/220 (60%), Gaps = 1/220 (0%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA +R PR GHR + + + E I+ LT+FAF +NW RP E+S+
Sbjct: 1 MDGNGRWAKSRLKPRIFGHRNSVSSVDATIEYCVENNIEMLTLFAFGRDNWLRPAQEVSD 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ L LK L NNI V V+G+R L + ++ +++ +E T+ NTGL L +A +
Sbjct: 61 LMDLFYKTLKDKTPKLHDNNIVVTVVGDRSRLSNKLIGMIEYSESLTKSNTGLKLRLAVD 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y+ R +I A + I ++++ G + ++D + AKYL ++P DL+IRT GE RLSDF
Sbjct: 121 YAGRWDIVEATRAIAREVDIGKLSVDEIDQNSFAKYLVGGNMP-VDLLIRTSGEVRLSDF 179
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+LWQ+AY+E F WPDFS++ A+ + R RRFG
Sbjct: 180 MLWQLAYAEMYFTDIMWPDFSKQELTRAVEYFYSRQRRFG 219
>gi|203287585|ref|YP_002222600.1| undecaprenyl diphosphate synthase [Borrelia recurrentis A1]
gi|201084805|gb|ACH94379.1| undecaprenyl diphosphate synthase [Borrelia recurrentis A1]
Length = 230
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 96/233 (41%), Positives = 138/233 (59%), Gaps = 4/233 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M S+S P H+GIIMDGN RWA +GL GH++G++ EIV + E+GIK L+++ FS
Sbjct: 1 MSSNSLPSHVGIIMDGNRRWALKKGLSFFEGHKEGLKRAKEIVKHSCELGIKCLSLYVFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW R SEI L+ LI +L F +NNIKV V G+ +L + +K+A + T
Sbjct: 61 TENWNRTNSEIEHLMFLIADYLSSEFKFYAENNIKVVVSGDIKTLSQKVKKSIKDATNYT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ GL L +A NY R+EI RAIK + + + ++ AK+LD ++ D DL
Sbjct: 121 KNFDGLILNLAINYGGRNEIVRAIKKVL----AKGLSVETLNEVEFAKFLDNQELGDLDL 176
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+IRTGG+ R+S+FLLW++AY EF+F WPD+ + L + R R FG
Sbjct: 177 LIRTGGDMRVSNFLLWRLAYCEFIFSNVLWPDYFVFHYERDLECFKNRKRNFG 229
>gi|255089362|ref|XP_002506603.1| predicted protein [Micromonas sp. RCC299]
gi|226521875|gb|ACO67861.1| predicted protein [Micromonas sp. RCC299]
Length = 355
Score = 175 bits (444), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 131/231 (56%), Gaps = 4/231 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGN RWA+ RG+ GH G++ IV + LT++AFS NWRR
Sbjct: 122 PRHVAVIMDGNARWASERGVAVATGHEAGVDTLRTIVRCCGAWDVAALTVYAFSHENWRR 181
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
SE+ L+ L++ L SL ++V V+G+ +D ++ + +A D TR NT L
Sbjct: 182 SRSEVEHLMSLLERTLVAELPSLVDEGVRVTVMGDMGMIDANLRAAINDAVDATRRNTKL 241
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLII 186
L +A +Y +R +I A + + + +G + D+ ++ ++L + +P +PDL++
Sbjct: 242 RLNVALSYGARQDIVNAARLLATEAAAGLIDPEDITEDVLGEHLASRTLPAEVREPDLLV 301
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
R GGE+R+S+FLLW++AY+E F WPDF F AL Y R RRFG
Sbjct: 302 RPGGERRVSNFLLWELAYTELYFADRMWPDFGERDFREALAWYAGRQRRFG 352
>gi|294666398|ref|ZP_06731644.1| undecaprenyl pyrophosphate synthetase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292603840|gb|EFF47245.1| undecaprenyl pyrophosphate synthetase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 253
Score = 175 bits (444), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 133/232 (57%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R PR GHR G N + E G+ LT+FAFS NW R
Sbjct: 11 PRHIAIIMDGNGRWAQRRRRPRVIGHRAGARAVNRTIDFCLEKGVSALTLFAFSSENWGR 70
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL L + L++ ++VR IG+R + + AE T N+ L
Sbjct: 71 PQDEVDALMKLFLHALDREVEELQRRGVQVRFIGDRSRFAAPLRDRMAGAERSTAANSRL 130
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA +Y R +I+ A + + +D+ +G + +D +L++ + +D+P PDL IRTGG
Sbjct: 131 VLSIAASYGGRQDIAAAARALAEDVAAGRLQPEQIDEALLSSRVALADLPAPDLFIRTGG 190
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+ R+S+FLLWQ+AY+E F WP+F + AL+ Y R+RRFG S +
Sbjct: 191 DTRISNFLLWQLAYTELWFTETLWPEFDAGVLQQALDDYAGRERRFGLTSAQ 242
>gi|108563588|ref|YP_627904.1| undecaprenyl pyrophosphate synthase [Helicobacter pylori HPAG1]
gi|107837361|gb|ABF85230.1| putative undecaprenyl pyrophosphate synthase [Helicobacter pylori
HPAG1]
Length = 234
Score = 175 bits (444), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 87/227 (38%), Positives = 136/227 (59%), Gaps = 1/227 (0%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPK 66
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
SE+ L+K++K +LK + NNI+ R IG+ ++ + + E+ TR
Sbjct: 67 SEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFTQ 126
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A NY S++E+SRA K++ + S +++ I+ LDT D+P+ DL++RTGGE
Sbjct: 127 VLALNYGSKNELSRAFKSLLESPPSHISLLESLENE-ISNRLDTHDLPEVDLLLRTGGEM 185
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 186 RLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 232
>gi|254282011|ref|ZP_04956979.1| undecaprenyl pyrophosphate synthetase 1 [gamma proteobacterium
NOR51-B]
gi|219678214|gb|EED34563.1| undecaprenyl pyrophosphate synthetase 1 [gamma proteobacterium
NOR51-B]
Length = 239
Score = 175 bits (444), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 82/220 (37%), Positives = 128/220 (58%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGN RWA +G+ GHR G+EV ++ A + G++ LT+FAFS NW RP +E+
Sbjct: 1 MDGNNRWAVRQGIAGHLGHRAGVEVVRAVMEACEKKGVEVLTLFAFSSENWGRPEAEVRA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ L+ +L+ L+++ I++R++G R + + + E T NT L +A +
Sbjct: 61 LMALLYRYLRSELEKLQRDGIRLRIVGRRDRFSPRLRRLFEVTEAATADNTNATLVLALD 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I+ A + + + +++GS+ ++ + L SD+P PDL IRT GE+R+S+F
Sbjct: 121 YGGRWDIASAARQLAESVQAGSLQPDQINEETLESQLSLSDLPPPDLCIRTAGEQRMSNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
LLW +AYSEF F WPDF A+ Y R+RRFG
Sbjct: 181 LLWHLAYSEFFFTDTLWPDFDETTLDAAIADYQRRERRFG 220
>gi|297380400|gb|ADI35287.1| undecaprenyl diphosphate synthase [Helicobacter pylori v225d]
Length = 234
Score = 175 bits (444), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 87/227 (38%), Positives = 136/227 (59%), Gaps = 1/227 (0%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPK 66
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
SE+ L+K++K +LK + NNI+ R IG+ ++ + + E+ TR
Sbjct: 67 SEVDFLMKMLKKYLKDERSTYLDNNIRFRAIGDLEGFSKELRETILQLENDTRHFKDFTQ 126
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A NY S++E+SRA K++ + S +++ I+ LDT D+P+ DL++RTGGE
Sbjct: 127 VLALNYGSKNELSRAFKSLLESPPSNISLLESLENE-ISNRLDTRDLPEVDLLLRTGGEM 185
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 186 RLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 232
>gi|78047030|ref|YP_363205.1| undecaprenyl pyrophosphate synthase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78035460|emb|CAJ23105.1| undecaprenyl pyrophosphate synthetase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 252
Score = 175 bits (444), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 93/236 (39%), Positives = 136/236 (57%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S++ P HI IIMDGNGRWA R PR GHR G N + E G+ LT+FAFS
Sbjct: 6 SAAVPRHIAIIMDGNGRWAQRRRRPRMIGHRAGARAVNRTIDFCLEKGVSALTLFAFSSE 65
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP E+ L+KL L + L++ ++VR IG+R + + AE T
Sbjct: 66 NWGRPQDEVDALMKLFLHALDREVEELQRRGVQVRFIGDRSRFAAPLRERMAGAERSTAT 125
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N+ L L IA +Y R +I+ A + + +D+ +G + +D +L++ + +D+P PDL I
Sbjct: 126 NSRLVLSIAASYGGRQDIAAAARALAEDVAAGRLQPEQIDEALLSSRVALADLPAPDLFI 185
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGG+ R+S+FLLWQ+AY+E F WP+F + AL+ + R+RRFG S +
Sbjct: 186 RTGGDTRISNFLLWQLAYTELWFTETLWPEFDAGVLQQALDDFAGRERRFGLTSAQ 241
>gi|269956963|ref|YP_003326752.1| undecaprenyl diphosphate synthase [Xylanimonas cellulosilytica DSM
15894]
gi|269305644|gb|ACZ31194.1| undecaprenyl diphosphate synthase [Xylanimonas cellulosilytica DSM
15894]
Length = 262
Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 133/228 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ ++MDGNGRWA RGL R GH+ G + ++VA A ++G+KN++ +AFS NW+R
Sbjct: 26 PKHVAVVMDGNGRWANQRGLSRIEGHKAGEKQLLDVVAGAVQLGVKNISAYAFSTENWKR 85
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ + +++R G L ++ L+ AE+ T+ N
Sbjct: 86 SPEEVKFLLGFNRDVIRRRRDEMGSWGVRIRWAGRTPRLWGSVIKELQVAEEMTKGNDAC 145
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R E++ A I +D+++G + + + KYL ++PD DL +R+ G
Sbjct: 146 TLTMCVNYGGRAELADAAAAIARDVKAGRLNPERISEKTLQKYLYVPELPDVDLFLRSSG 205
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S+F++WQ AY+E +FIPE WPD R + A Y RDRR+GG
Sbjct: 206 EQRTSNFMVWQSAYAEMMFIPELWPDVDRRHLWKACEDYASRDRRYGG 253
>gi|282850822|ref|ZP_06260196.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus gasseri
224-1]
gi|282557774|gb|EFB63362.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus gasseri
224-1]
Length = 219
Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 89/215 (41%), Positives = 132/215 (61%), Gaps = 3/215 (1%)
Query: 28 RGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLK 87
R LPR GHR G++ I AA E+GIK LT++AFS NW RP E++ L++L F
Sbjct: 5 RHLPRFVGHRHGMDNIRNIALAANEMGIKVLTLYAFSTENWARPTDEVNYLMRLPIDFFD 64
Query: 88 KGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRA 147
K L +NN++V ++G L + V ++A +T NTG+ L AFNY SR EI+
Sbjct: 65 KFMPELMENNVRVNIMGFLDELPEKTYLVTQKAMAETANNTGMVLNFAFNYGSRREITAG 124
Query: 148 IKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP---DPDLIIRTGGEKRLSDFLLWQVAY 204
++ I + +++G + D+D +++ +L T + DPDL+IRT GE+RLS+FLLWQ+AY
Sbjct: 125 VQEIARQVKAGKINPSDIDEKMVSDHLLTHSLTPYDDPDLLIRTSGEERLSNFLLWQMAY 184
Query: 205 SEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+EF F + WPDF + + + Y R+RRFG L
Sbjct: 185 TEFSFSNKLWPDFDKNDLENLVKDYYGRNRRFGKL 219
>gi|94676664|ref|YP_588962.1| undecaprenyl diphosphate synthase [Baumannia cicadellinicola str.
Hc (Homalodisca coagulata)]
gi|94219814|gb|ABF13973.1| undecaprenyl diphosphate synthase [Baumannia cicadellinicola str.
Hc (Homalodisca coagulata)]
Length = 253
Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 92/230 (40%), Positives = 139/230 (60%), Gaps = 6/230 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA + GH+ G++ ++ A + +K LT++AFS NW R
Sbjct: 17 PQHVAIIMDGNGRWAKKQSKLPIFGHQAGVKSVRRAISFAVQHKLKALTLYAFSRENWHR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGN--RLSLD-DDILCVLKEAEDQTRLN 127
PV ++S L++L L L K+NI + +IG+ R S +++C AE T N
Sbjct: 77 PVQDVSALMELFIRLLDSKINILHKHNICLNIIGDIDRFSFRLQELIC---RAETLTSKN 133
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
GLNL IA NYS R +I +++K I I+ G + ++ ++++Y+ + + DL+IR
Sbjct: 134 DGLNLNIAANYSGRWDIIKSVKKIAIKIQQGMLRPDQINEEILSRYICMNKLAPVDLVIR 193
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
TGGE+R+S+FLLWQ+AY+E F WPDF+ +F ALN + R+RRFG
Sbjct: 194 TGGEQRISNFLLWQIAYAELFFTKVLWPDFNDIVFESALNAFAQRERRFG 243
>gi|18400264|ref|NP_565551.1| ACPT (Arabidopsis cis-prenyltransferase); dehydrodolichyl
diphosphate synthase [Arabidopsis thaliana]
gi|75223198|sp|O80458|DDPS1_ARATH RecName: Full=Dehydrodolichyl diphosphate synthase 1;
Short=Dedol-PP synthase 1
gi|6651294|gb|AAF22257.1|AF162441_1 cis-prenyltransferase homolog [Arabidopsis thaliana]
gi|7960765|emb|CAB91841.1| dehydrodolichyl diphosphate synthase [Arabidopsis thaliana]
gi|20196999|gb|AAC23756.2| expressed protein [Arabidopsis thaliana]
gi|330252358|gb|AEC07452.1| dehydrodolichyl diphosphate synthase 1 [Arabidopsis thaliana]
Length = 303
Score = 175 bits (443), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 90/230 (39%), Positives = 132/230 (57%), Gaps = 3/230 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I+DGN RWA GL GH G + +I E+G+ ++ FAFS NW R
Sbjct: 71 PRHVAFILDGNRRWAKRAGLTTSQGHEAGAKRLIDIAELCFELGVHTVSAFAFSTENWGR 130
Query: 71 PVSEISELVKLIKSFLKKG-FYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
EI L+ LI+ + K ++ ++V VIGN+ + + +L + E E+ T+
Sbjct: 131 DKIEIDNLMSLIQHYRNKSNIKFFHRSEVRVSVIGNKTKIPESLLKEIHEIEEATKGYKN 190
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT--SDVPDPDLIIR 187
+L +A +YS + +I A K++ + E G + DVD +LI + L T SD P PDL+IR
Sbjct: 191 KHLIMAVDYSGKFDIMHACKSLVKKSEKGLIREEDVDEALIERELLTNCSDFPSPDLMIR 250
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
T GE+R+S+F LWQ+AYSE F P +WPDF ++ AL Y R+RRFG
Sbjct: 251 TSGEQRISNFFLWQLAYSELFFSPVFWPDFDKDKLLEALASYQRRERRFG 300
>gi|108800415|ref|YP_640612.1| undecaprenyl pyrophosphate synthase [Mycobacterium sp. MCS]
gi|119869544|ref|YP_939496.1| undecaprenyl pyrophosphate synthetase [Mycobacterium sp. KMS]
gi|108770834|gb|ABG09556.1| Undecaprenyl pyrophosphate synthetase [Mycobacterium sp. MCS]
gi|119695633|gb|ABL92706.1| Undecaprenyl pyrophosphate synthetase [Mycobacterium sp. KMS]
Length = 298
Score = 175 bits (443), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 130/227 (57%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ ++MDGNGRWA RGL R GH+ G V +I A E+GIK+LT++AFS NW+R
Sbjct: 70 PQHVAVVMDGNGRWATQRGLGRTEGHKMGEAVLIDITCGAIEIGIKHLTVYAFSTENWKR 129
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ +L +++R +G+R + + AE+ T N +
Sbjct: 130 STEEVRFLMGFNREVVRRRRENLNDMGVRMRWVGSRPRMWRSVSKEFDIAEEMTVDNDVI 189
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ NY R EI A + + Q+ G V + + A++L D+PD DL IRT G
Sbjct: 190 TINYCVNYGGRTEIVEAARQLAQEAVDGKVNPSRITEAAFARHLHRPDIPDVDLFIRTSG 249
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+R S+FLLWQ AY+E+VF + WPD+ R + A +Y R+RRFG
Sbjct: 250 EQRASNFLLWQSAYAEYVFQDKLWPDYDRRDLWAACEEYVSRNRRFG 296
>gi|262372665|ref|ZP_06065944.1| di-trans,poly-cis-decaprenylcistransferase [Acinetobacter junii
SH205]
gi|262312690|gb|EEY93775.1| di-trans,poly-cis-decaprenylcistransferase [Acinetobacter junii
SH205]
Length = 249
Score = 175 bits (443), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 138/232 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGN R+A L + GHR+G V + IV VG++ LT+FAFS NW R
Sbjct: 10 PKHVAIIMDGNNRFAKKNKLQKGDGHREGKNVLDPIVEHCKRVGVQALTVFAFSSENWNR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL++ + + ++K NI +R IG+R L +++ ++ AE +T +
Sbjct: 70 PQFEVDLLMKLLEDTIHEQLPRMEKFNIALRFIGDRSKLSNELKDLMLYAEQKTASFNSM 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA +Y +++ A K I QD+ G V ++ L KY+ +D+P DL+IRTGG
Sbjct: 130 TLTIAISYGGMWDMAHAAKCIAQDVVDGKVQVDQINVDLFDKYVSLNDLPAVDLLIRTGG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+ RLS+FLLWQ AY+E F WP+F+ + A + ++ R+RRFG S++
Sbjct: 190 DYRLSNFLLWQAAYAELYFTDTLWPEFTVKELDCAFDVFSGRERRFGKTSEQ 241
>gi|320449279|ref|YP_004201375.1| di-trans,poly-cis-decaprenylcistransferase [Thermus scotoductus
SA-01]
gi|320149448|gb|ADW20826.1| di-trans,poly-cis-decaprenylcistransferase [Thermus scotoductus
SA-01]
Length = 263
Score = 175 bits (443), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 138/233 (59%), Gaps = 6/233 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+G+I+DGN R+A A GL GH G++ E++ E+GIK +T++ FS +N++R
Sbjct: 30 PKHLGLILDGNRRYARALGLSPVKGHEFGVQKAYEVLEWCLEMGIKTVTVWVFSTDNFKR 89
Query: 71 PVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
P E+ EL++L ++ + + ++ ++VR IG R +++L L+ E +T+ +
Sbjct: 90 PPEEVEELMRLFVREAERMAEDHRILEHQVRVRFIGRREGFSEEVLRALERLEAKTQHHQ 149
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDVPDPDL 184
G+ L IA Y R+EI A+K + + + +V L IA++L T+ +PDPD
Sbjct: 150 GMVLNIALGYGGREEIVDAVKRLLLEAWKRGLSPKEVAEGLTPEDIARHLYTAGLPDPDF 209
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IIRT GE RLS FLLWQ AYSEF F WP+F + F AL Y R+RRFG
Sbjct: 210 IIRTSGEIRLSGFLLWQSAYSEFYFADVLWPEFRKIDFLRALRSYQARERRFG 262
>gi|126253821|sp|Q1RII8|UPPS_RICBR RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
Length = 226
Score = 175 bits (443), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 95/225 (42%), Positives = 135/225 (60%), Gaps = 6/225 (2%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGN RWAA LP+ GHR G + +E++ + I +T++ FS NW+R
Sbjct: 6 HLAIIMDGNARWAATHNLPKSEGHRAGADKVHELLPEFINLKIPYITLYTFSSENWQRSN 65
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+EIS L++L+ +LKK +L KN IK++VIG L D + + A + T+ N L L
Sbjct: 66 TEISFLMRLLNIYLKKELDNLHKNGIKIKVIGRLNLLSDSLQKQINNAIELTKDNNKLTL 125
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IAF+Y SR EI+ A I I SG ++ S I L ++PD DL+IR GG
Sbjct: 126 CIAFSYGSRQEITDACTKI---IASGKT---EILESDIQNALYDPEMPDVDLLIRPGGVF 179
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
R+S+FLLWQ AY+E F +YWPDF++E +A++ Y+ R R FG
Sbjct: 180 RISNFLLWQAAYAELYFSQKYWPDFNKEDIINAIDDYSKRKRTFG 224
>gi|91205560|ref|YP_537915.1| undecaprenyl pyrophosphate synthetase [Rickettsia bellii RML369-C]
gi|91069104|gb|ABE04826.1| Undecaprenyl pyrophosphate synthetase [Rickettsia bellii RML369-C]
Length = 264
Score = 174 bits (442), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 95/225 (42%), Positives = 135/225 (60%), Gaps = 6/225 (2%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGN RWAA LP+ GHR G + +E++ + I +T++ FS NW+R
Sbjct: 44 HLAIIMDGNARWAATHNLPKSEGHRAGADKVHELLPEFINLKIPYITLYTFSSENWQRSN 103
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+EIS L++L+ +LKK +L KN IK++VIG L D + + A + T+ N L L
Sbjct: 104 TEISFLMRLLNIYLKKELDNLHKNGIKIKVIGRLNLLSDSLQKQINNAIELTKDNNKLTL 163
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IAF+Y SR EI+ A I I SG ++ S I L ++PD DL+IR GG
Sbjct: 164 CIAFSYGSRQEITDACTKI---IASGKT---EILESDIQNALYDPEMPDVDLLIRPGGVF 217
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
R+S+FLLWQ AY+E F +YWPDF++E +A++ Y+ R R FG
Sbjct: 218 RISNFLLWQAAYAELYFSQKYWPDFNKEDIINAIDDYSKRKRTFG 262
>gi|325189482|emb|CCA23970.1| undecaprenyl pyrophosphate synthetase putative [Albugo laibachii
Nc14]
Length = 353
Score = 174 bits (442), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 134/228 (58%), Gaps = 1/228 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGN R+ A+ GH G + E G++ LT++AFS NW R
Sbjct: 125 PKHLAVIMDGNRRFGKAKYGLSVRGHADGSRTLVSFIEWCMEFGVEILTVYAFSSENWNR 184
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRV-IGNRLSLDDDILCVLKEAEDQTRLNTG 129
P EI L+ L F++ + +I++RV + N L ++ ++E E T
Sbjct: 185 PQDEIDTLLGLFDQFMQDIIPQALEKDIRIRVHVTNSEKLPHHVIAAIQETEKTTAQCQR 244
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L I +Y +R+E+ A K I + IESG +C+ D++ ++I+ +L T D+PDPD+++RT
Sbjct: 245 LQLNICASYGAREELVSAFKQIGEKIESGYMCAADINEAVISNHLLTRDIPDPDVLLRTS 304
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
GE R+S+FLL+Q+AY+E +F + WP+F ++ F L +Y+ R RRFG
Sbjct: 305 GEHRISNFLLYQIAYTELIFADKLWPEFKKQDFIAFLREYSQRQRRFG 352
>gi|261839941|gb|ACX99706.1| hypothetical protein HPKB_1157 [Helicobacter pylori 52]
Length = 234
Score = 174 bits (442), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 87/227 (38%), Positives = 136/227 (59%), Gaps = 1/227 (0%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA + R GH+KG++ +I A +K LT++AFS NW+RP
Sbjct: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLKCLTLYAFSTENWKRPK 66
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
SE+ L+K++K +LK + N+I+ + IG+ ++ + + E+ TR
Sbjct: 67 SEVDFLMKMLKKYLKDERSTYLDNHIRFKAIGDLEGFSKELRETILQLENDTRHFKDFTQ 126
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A NY S++EISRA K++ + S +++ I+ LDT D+P+ DL++RTGGE
Sbjct: 127 VLALNYGSKNEISRAFKSLLESPPSNISLLESLENE-ISNRLDTRDLPEVDLLLRTGGEM 185
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 186 RLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 232
>gi|157827276|ref|YP_001496340.1| undecaprenyl pyrophosphate synthetase [Rickettsia bellii OSU
85-389]
gi|157802580|gb|ABV79303.1| Undecaprenyl pyrophosphate synthetase [Rickettsia bellii OSU
85-389]
Length = 226
Score = 174 bits (442), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 95/225 (42%), Positives = 135/225 (60%), Gaps = 6/225 (2%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGN RWAA LP+ GHR G + +E++ + I +T++ FS NW+R
Sbjct: 6 HLAIIMDGNARWAATHNLPKSEGHRAGADKVHELLPEFINLKIPYVTLYTFSSENWQRSN 65
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+EIS L++L+ +LKK +L KN IK++VIG L D + + A + T+ N L L
Sbjct: 66 TEISFLMRLLNIYLKKELDNLHKNGIKIKVIGRLNLLSDSLQKQINNAIELTKDNNKLTL 125
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IAF+Y SR EI+ A I I SG ++ S I L ++PD DL+IR GG
Sbjct: 126 CIAFSYGSRQEITDACTKI---IASGKT---EILESDIQNALYDPEMPDVDLLIRPGGVF 179
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
R+S+FLLWQ AY+E F +YWPDF++E +A++ Y+ R R FG
Sbjct: 180 RISNFLLWQAAYAELYFSQKYWPDFNKEDIINAIDDYSKRKRTFG 224
>gi|85059916|ref|YP_455618.1| undecaprenyl pyrophosphate synthase [Sodalis glossinidius str.
'morsitans']
gi|84780436|dbj|BAE75213.1| undecaprenyl pyrophosphate synthase [Sodalis glossinidius str.
'morsitans']
Length = 253
Score = 174 bits (442), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 89/235 (37%), Positives = 135/235 (57%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ SS P H+ IIMDGNGRWA RG R GH+ G++ V+ A LT++AFS
Sbjct: 12 LPSSSPRHVAIIMDGNGRWAKNRGKLRIFGHQAGVKSVRRAVSFAVSHHFDALTLYAFSS 71
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+S L++L L SL K+N+++R+IG+ + ++ +E T
Sbjct: 72 ENWNRPSQEVSALMELFVRALDSEVKSLHKHNVRLRIIGDTSRFGMSLQERIRRSEALTC 131
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N GL L IA NY R +I + ++ + ++ G + +D + + + +++ DL+
Sbjct: 132 NNDGLTLNIAANYGGRWDIIQGVRQLAARVQEGILRPDQIDEDALCQVVCMNELAPVDLV 191
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IRTGGE R+S+FLLWQ+AY+E F WPDF +F AL+ + R+RRFGG +
Sbjct: 192 IRTGGEHRISNFLLWQIAYAELFFTDVLWPDFDDAVFEGALDAFAQRERRFGGTT 246
>gi|90022238|ref|YP_528065.1| undecaprenyl pyrophosphate synthetase [Saccharophagus degradans
2-40]
gi|89951838|gb|ABD81853.1| Undecaprenyl pyrophosphate synthetase [Saccharophagus degradans
2-40]
Length = 249
Score = 174 bits (442), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 88/230 (38%), Positives = 132/230 (57%), Gaps = 1/230 (0%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGN RWA G AGH+ G+E +++AA G++ LT+FAFS NWRRP
Sbjct: 13 HVAIIMDGNNRWAKREGKQGIAGHKAGVERIRDVLAACRAQGVEVLTLFAFSSENWRRPP 72
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+ L+ L S+LKK L + + +RVIGNR +L ++EAE T + L
Sbjct: 73 IEVEALMGLFYSYLKKEARKLAEEGVALRVIGNRSRFSKSLLRAIEEAE-STASDGDATL 131
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA +Y +I+ + + + + G + +D ++ ++ T+ +P DL+IRTGGE
Sbjct: 132 VIAADYGGCWDIANSARQLAEAAVRGDITPEQIDEHALSNHIQTAGLPPLDLLIRTGGEL 191
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
R+S+FLLWQ AY+E F WPDF ++ A+ ++ R RRFG S +
Sbjct: 192 RISNFLLWQAAYAELYFSDLLWPDFGKDALDEAVADFHRRQRRFGKTSDQ 241
>gi|225021781|ref|ZP_03710973.1| hypothetical protein CORMATOL_01809 [Corynebacterium matruchotii
ATCC 33806]
gi|224945477|gb|EEG26686.1| hypothetical protein CORMATOL_01809 [Corynebacterium matruchotii
ATCC 33806]
Length = 223
Score = 174 bits (442), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 88/221 (39%), Positives = 127/221 (57%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA RGL R GH++G V ++VAA + I L+ +AFS NWRR E+
Sbjct: 1 MDGNGRWAEQRGLKRTEGHKRGEAVLLDMVAACQALDIPYLSAYAFSTENWRRSADEVRF 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ + L + L + +KVR +G R L +L L+ AE+ T+ NT + LF+ N
Sbjct: 61 LMGFNRDVLTRQKMWLHERGVKVRWVGRRPRLWRSVLRELESAEELTKNNTSMTLFMCVN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R EI ++ I + + G + D+ +LD +PD DL +R GEKR S+F
Sbjct: 121 YGGRAEIIDGVREIVRKAQRGEIRPDDITEKNFHTFLDEPTMPDVDLFLRPSGEKRTSNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
LLWQ AY+E V+ + +PD++ + F A+ +Y RDRRFGG
Sbjct: 181 LLWQSAYAEMVYQNKLFPDYTPQDLFDAVEEYAKRDRRFGG 221
>gi|126436038|ref|YP_001071729.1| undecaprenyl pyrophosphate synthetase [Mycobacterium sp. JLS]
gi|126235838|gb|ABN99238.1| Undecaprenyl pyrophosphate synthetase [Mycobacterium sp. JLS]
Length = 298
Score = 174 bits (442), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 130/227 (57%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ ++MDGNGRWA RGL R GH+ G V +I A E+GIK+LT++AFS NW+R
Sbjct: 70 PQHVAVVMDGNGRWATQRGLGRTEGHKMGEAVLIDITCGAIEIGIKHLTVYAFSTENWKR 129
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ +L +++R +G+R + + AE+ T N +
Sbjct: 130 STEEVRFLMGFNREVVRRRRENLNDMGVRMRWVGSRPRMWRSVSKEFDIAEEMTVDNDVI 189
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ NY R EI A + + Q+ G V + + A++L D+PD DL IRT G
Sbjct: 190 TINYCVNYGGRTEIVEAARQLAQEAVDGKVNPSRIAEAAFARHLHRPDIPDVDLFIRTSG 249
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+R S+FLLWQ AY+E+VF + WPD+ R + A +Y R+RRFG
Sbjct: 250 EQRASNFLLWQSAYAEYVFQDKLWPDYDRRDLWAACEEYVSRNRRFG 296
>gi|15645835|ref|NP_208013.1| undecaprenyl pyrophosphate synthase [Helicobacter pylori 26695]
gi|2501567|sp|P55984|UPPS_HELPY RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|2314380|gb|AAD08263.1| conserved hypothetical protein [Helicobacter pylori 26695]
Length = 234
Score = 174 bits (442), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 87/227 (38%), Positives = 136/227 (59%), Gaps = 1/227 (0%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPK 66
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
SE+ L+K++K +LK + NNI+ R IG+ ++ + + E+ TR
Sbjct: 67 SEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFTQ 126
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A NY S++E+SRA K++ + S +++ I+ LDT D+P+ DL++RTGGE
Sbjct: 127 VLALNYGSKNELSRAFKSLLESPPSHINLLESLENE-ISNRLDTHDLPEVDLLLRTGGEM 185
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 186 RLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 232
>gi|242309659|ref|ZP_04808814.1| undecaprenyl pyrophosphate synthetase [Helicobacter pullorum MIT
98-5489]
gi|239523660|gb|EEQ63526.1| undecaprenyl pyrophosphate synthetase [Helicobacter pullorum MIT
98-5489]
Length = 224
Score = 174 bits (442), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 91/229 (39%), Positives = 137/229 (59%), Gaps = 10/229 (4%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA R PR GH++G + + I A+ GI LT++AFS NW RP
Sbjct: 4 HLAIIMDGNGRWAKNRFKPRFFGHQEGAKTIHSITETCAKKGISYLTLYAFSTENWNRPK 63
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLK--EAEDQTRLNTGL 130
SEI L+ L+ +L++ + +NI+ +VIG+ + + + ++ Q + N GL
Sbjct: 64 SEIDFLMNLLDKYLQEQEQTYLVSNIRFKVIGDISTFSPKLQEKIHYLQSITQEKCN-GL 122
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY S+DE+ RA F I++ + ++ I++ LDT+ +P+ D++IRTGG
Sbjct: 123 TQILALNYGSKDELRRA----FLKIQAQKL---EITQETISQNLDTATIPEVDMLIRTGG 175
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+RLS+FLLWQ AY+E F WPDF L +++LR RRFGG+
Sbjct: 176 EQRLSNFLLWQSAYAELFFTKTLWPDFCPAELEQMLQEFSLRQRRFGGI 224
>gi|116666971|pdb|2D2R|A Chain A, Crystal Structure Of Helicobacter Pylori Undecaprenyl
Pyrophosphate Synthase
gi|116666972|pdb|2D2R|B Chain B, Crystal Structure Of Helicobacter Pylori Undecaprenyl
Pyrophosphate Synthase
gi|151566470|pdb|2DTN|A Chain A, Crystal Structure Of Helicobacter Pylori Undecaprenyl
Pyrophosphate Synthase Complexed With Pyrophosphate
gi|151566471|pdb|2DTN|B Chain B, Crystal Structure Of Helicobacter Pylori Undecaprenyl
Pyrophosphate Synthase Complexed With Pyrophosphate
Length = 245
Score = 174 bits (442), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 89/244 (36%), Positives = 142/244 (58%), Gaps = 10/244 (4%)
Query: 5 MMSSSPP---------DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGI 55
M+S++ P H+ IIMDGNGRWA + R GH+KG++ +I A +
Sbjct: 1 MLSATQPLSEKLDSTLKHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKL 60
Query: 56 KNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILC 115
+ LT++AFS NW+RP SE+ L+K++K +LK + NNI+ R IG+ ++
Sbjct: 61 ECLTLYAFSTENWKRPKSEVDFLMKMLKKYLKDERSTYLDNNIRFRAIGDLEGFSKELRD 120
Query: 116 VLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD 175
+ + E+ TR +A NY S++E+SRA K++ + S +++ I+ LD
Sbjct: 121 TILQLENDTRHFKDFTQVLALNYGSKNELSRAFKSLLESPPSNISLLESLENE-ISNRLD 179
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
T ++P+ DL++RTGGE RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+
Sbjct: 180 TRNLPEVDLLLRTGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRK 239
Query: 236 FGGL 239
FG L
Sbjct: 240 FGEL 243
>gi|317011420|gb|ADU85167.1| undecaprenyl pyrophosphate synthase [Helicobacter pylori
SouthAfrica7]
Length = 235
Score = 174 bits (442), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 85/227 (37%), Positives = 136/227 (59%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 7 HLAIIMDGNGRWARLKNKARAYGHKKGVKTLKDITIWCANHQLECLTLYAFSTENWKRPK 66
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
SE+ L+K++K +LK + N+I+ R IG+ ++ + + E T
Sbjct: 67 SEVDFLMKMLKKYLKDERSTYLNNHIRFRAIGDLEGFSKELRDTILQLESDTGHFKDFTQ 126
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A NY S++E+SRA K++ ++ + ++ + + I+ LDT D+P+ DL++RTGGE
Sbjct: 127 VLALNYGSKNELSRAFKSLLENPPNNNIEPLENLENEISNRLDTHDLPEVDLLLRTGGEM 186
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLS+FLLWQ +Y+E F P WPDF+ + + +N + R R+FG L
Sbjct: 187 RLSNFLLWQSSYAELFFTPTLWPDFTPKDLENIINDFYKRVRKFGEL 233
>gi|333022717|ref|ZP_08450781.1| putative di-trans,poly-cis-decaprenylcistransferase [Streptomyces
sp. Tu6071]
gi|332742569|gb|EGJ73010.1| putative di-trans,poly-cis-decaprenylcistransferase [Streptomyces
sp. Tu6071]
Length = 251
Score = 174 bits (442), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 134/241 (55%), Gaps = 5/241 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A+ + P H+ +MDGNGRWA R LPR AGHR +I+ AA G++ L+++A
Sbjct: 8 AATRTGRGPRHVACVMDGNGRWAERRSLPRTAGHRAAETTVIDIIEAARSAGVEWLSLYA 67
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIG-NRLSLDDDILCVLKEAE 121
FS NW RP +E+ L+ L++ + K L I+ R +G + + + + +
Sbjct: 68 FSTENWSRPSAEVGYLMDLVRHTVHKHAPLLHARGIRCRFLGADDARVPEGLARDFADLT 127
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T N G+ L IAF++ R +I A +++ + V + +V A +L D PD
Sbjct: 128 TLTAGNRGMTLTIAFDHGGRGDIVAAARSLIR----AGVPAEEVTERSFATHLPFPDTPD 183
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRT GE+R+S+F+LWQVAY+E+VF WPDF F L+ Y R+RRFGG+
Sbjct: 184 VDLVIRTSGEQRISNFMLWQVAYAEWVFPTVLWPDFRAPHFLECLHHYRHRERRFGGVPA 243
Query: 242 K 242
+
Sbjct: 244 Q 244
>gi|254779765|ref|YP_003057871.1| undecaprenyl pyrophosphate synthase [Helicobacter pylori B38]
gi|254001677|emb|CAX29894.1| Undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) (UPP
synthetase) (Di-trans,poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS) [Helicobacter
pylori B38]
Length = 234
Score = 174 bits (442), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 87/227 (38%), Positives = 137/227 (60%), Gaps = 1/227 (0%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPK 66
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
SE+ L+K++K +LK + NNI+ R IG+ ++ + + E+ TR
Sbjct: 67 SEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFPKELRDTILQLENDTRHFKDFTQ 126
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A NY S++E+SRA K++ ++ S +++ I+ LDT D+P+ DL++RTGGE
Sbjct: 127 VLALNYGSKNELSRAFKSLLENPPSHINPIESLENE-ISNRLDTHDLPEVDLLLRTGGEM 185
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 186 RLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 232
>gi|242048426|ref|XP_002461959.1| hypothetical protein SORBIDRAFT_02g011210 [Sorghum bicolor]
gi|241925336|gb|EER98480.1| hypothetical protein SORBIDRAFT_02g011210 [Sorghum bicolor]
Length = 307
Score = 174 bits (442), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 88/234 (37%), Positives = 133/234 (56%), Gaps = 5/234 (2%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P H+ ++MDGN RWA ARGL GH+ G IV + GI+ LT F S N
Sbjct: 69 SLPRHVAVVMDGNSRWARARGLTPADGHKAGGRNLERIVGLSRAWGIRALTAFVCSRENL 128
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP +E+ ++ L + + L + I+++VIG+ + + ++A++ TR N+
Sbjct: 129 SRPKAEVDYMMGLSEWLIGDNIDKLSRQGIRLQVIGDATQMPASLRSAAEQADEATRHNS 188
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS-----DVPDPD 183
L++ +A YS R ++ +A + + ++ ++G + DVD SL+A L TS + PD
Sbjct: 189 QLHVMLAICYSGRWDMVQACRELVREAQAGRLSPDDVDESLVAGKLATSAAGHGEFSCPD 248
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
L++RT GE RLS+FLLWQ AYSEF F + WPDF + AL + RDRRFG
Sbjct: 249 LVVRTSGELRLSNFLLWQSAYSEFFFTDKMWPDFGEAEYLEALRSFQARDRRFG 302
>gi|224104283|ref|XP_002313383.1| predicted protein [Populus trichocarpa]
gi|222849791|gb|EEE87338.1| predicted protein [Populus trichocarpa]
Length = 234
Score = 174 bits (442), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 134/220 (60%), Gaps = 3/220 (1%)
Query: 11 PDHIGIIMDGNGRWAAARG-LPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ +IMDGN RWA RG + AGH G E+V + G++ LT+FAFS +NW
Sbjct: 2 PRHVAVIMDGNARWARQRGFIALSAGHEAGARSLRELVELCCDWGVRVLTVFAFSYDNWI 61
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ L+ L + LK + + +V IG+ L + + ++ + E++T+ N+
Sbjct: 62 RPKVEVDFLMSLFERMLKSELDNFVRQGARVSTIGDSSRLSESLKKLISDVEEKTKDNSR 121
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT--SDVPDPDLIIR 187
L+L +A +YS + ++++A K+I Q ++ G+V D+D SL+ + L+T ++ P PDL+IR
Sbjct: 122 LHLIVAVSYSGKYDVTQACKSIAQKVKDGTVQLEDIDESLLEQELETNCAEYPCPDLLIR 181
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALN 227
T GE R+S+FLLWQ+AY+E F WPDF + F AL
Sbjct: 182 TSGELRISNFLLWQLAYTELFFAEALWPDFGKAEFVEALT 221
>gi|296101343|ref|YP_003611489.1| undecaprenyl pyrophosphate synthase [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295055802|gb|ADF60540.1| undecaprenyl pyrophosphate synthase [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 229
Score = 174 bits (441), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 88/226 (38%), Positives = 134/226 (59%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA +G R GH+ G + V+ AA GI LT++AFS NW RP E++
Sbjct: 1 MDGNGRWAKRQGKIRAFGHKAGAKSVRRAVSFAANNGIDALTLYAFSSENWNRPAQEVTA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L L SL ++N+++RVIG + + +++AE T NTGL L IA N
Sbjct: 61 LMELFVWALDSEVKSLHRHNVRLRVIGETSRFNSRLQERIRKAEALTENNTGLTLNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I + ++++ + ++ G + +D ++K + +++ DL+IRTGGE R+S+F
Sbjct: 121 YGGRWDIIQGVRHLAEQVQEGLLRPDQIDEDALSKQICMNELAPVDLVIRTGGEHRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
LLWQ+AY+E F WPDF + F AL+ + R+RRFGG G
Sbjct: 181 LLWQIAYAELYFTDVLWPDFDEQDFEGALHAFANRERRFGGTEPGG 226
>gi|269138098|ref|YP_003294798.1| undecaprenyl pyrophosphate synthase [Edwardsiella tarda EIB202]
gi|267983758|gb|ACY83587.1| undecaprenyl pyrophosphate synthase [Edwardsiella tarda EIB202]
gi|304558142|gb|ADM40806.1| Undecaprenyl pyrophosphate synthetase [Edwardsiella tarda FL6-60]
Length = 231
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/223 (39%), Positives = 128/223 (57%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA +G R GH+ G++ V A GI+ LT++AFS NW RP E+S
Sbjct: 1 MDGNGRWAKRQGKMRVFGHKAGVKSVRCAVRFAVTRGIRALTLYAFSSENWNRPQQEVSA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L L L K+ ++++VIG+ + ++ +E T NTGL L IA N
Sbjct: 61 LMELFVRALDSEVKRLHKHQVRLKVIGDISRFSPRLQERIRRSEQMTAENTGLTLNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I + +K + + + G++ + S++ + + D DL+IRTGGE R+S+F
Sbjct: 121 YGGRWDIVQGVKTLAEQVRQGTLLPEAITESMLGEQICLHDQDAVDLVIRTGGEHRVSNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LLWQ+AYSEF F WPDF F ALN + R+RRFGG +
Sbjct: 181 LLWQIAYSEFYFTDVLWPDFDETTFEGALNAFAQRERRFGGTT 223
>gi|297183237|gb|ADI19376.1| undecaprenyl pyrophosphate synthase [uncultured Spirochaetales
bacterium HF0500_06B09]
Length = 307
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/229 (41%), Positives = 132/229 (57%), Gaps = 6/229 (2%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+GIIMDGNGRWA ARGL R G+R G + V +A++GI LT++AFS +NWRRP
Sbjct: 38 HVGIIMDGNGRWARARGLSRYDGYRAGTDAVRRAVECSADLGIGALTLYAFSSDNWRRPY 97
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+ L+ L + +L++ + ++V IG R + ++ +E T L L
Sbjct: 98 GEVQLLLSLFRWYLQRETANCVDQGVRVSFIGRRDRFPATLQREIERSESATDSCDQLLL 157
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA +YS+RDEI + D D L + S+V DLI+RTGGE+
Sbjct: 158 RIAADYSARDEILATAAMLSSDHPP---TRSDFGRKLTGGVGNLSEV---DLIVRTGGEQ 211
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
RLSDFLLW+ AY+E VFI WPDF+R +LN++ R+RRFGG+ K
Sbjct: 212 RLSDFLLWEAAYAELVFIKTLWPDFTRIDLERSLNEFRKRERRFGGIGK 260
>gi|319956630|ref|YP_004167893.1| undecaprenyl pyrophosphate synthetase [Nitratifractor salsuginis
DSM 16511]
gi|319419034|gb|ADV46144.1| Undecaprenyl pyrophosphate synthetase [Nitratifractor salsuginis
DSM 16511]
Length = 226
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/228 (39%), Positives = 130/228 (57%), Gaps = 9/228 (3%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVA-AAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWAA RGL R GH G+E + A E I+ LT++AFS NW+RP
Sbjct: 7 HLAIIMDGNGRWAAERGLRRTKGHEAGVETVRRVTEYCAKEPEIETLTLYAFSTENWKRP 66
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E+ L+ L++ ++++ ++ I+ IG+ + L+ + TR N L
Sbjct: 67 KMEVDYLMHLLEKYIRQEQEHYMEHGIRFETIGDLSPFGSKLRQTLEATRELTRNNRRLT 126
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+A NY RDEI R+++ E S I+++LDT D DL+IRT GE
Sbjct: 127 QILALNYGGRDEIVRSVRRCLAAGEEPS-------EENISRHLDTP-YTDVDLLIRTSGE 178
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+RLS+FLLWQ++Y+E F P YWPDFS E ++ + R+R+FGG+
Sbjct: 179 QRLSNFLLWQLSYTELAFTPTYWPDFSVEELQSIIDDFKNRNRKFGGI 226
>gi|254431931|ref|ZP_05045634.1| di-trans,poly-cis-decaprenylcistransferase [Cyanobium sp. PCC 7001]
gi|197626384|gb|EDY38943.1| di-trans,poly-cis-decaprenylcistransferase [Cyanobium sp. PCC 7001]
Length = 258
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/239 (36%), Positives = 134/239 (56%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ A + + P H+ +IMDGNGRWA RGLPR GHR+G+E + ++ G+ LT
Sbjct: 16 LPAGLDPARLPSHVAVIMDGNGRWARRRGLPRVMGHREGVEALKRTLRLCSDWGVGALTA 75
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP E++ L+ L + L++ L++ +++ +G+ L + ++ +A
Sbjct: 76 YAFSTENWNRPGEEVNFLMALFERVLEREIEGLEREQVRISFLGDLEPLPHRLQHLIADA 135
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+T N G+ + NY R E+ RA + + + G + +D A L T+
Sbjct: 136 TVRTAGNGGIRFNVCTNYGGRAELVRAARRLAERAARGELDPASIDEGCFAAELHTAGQL 195
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRT GE+R+S+FLLWQ+AY+E WPDF+ E AL Y R RRFGG+
Sbjct: 196 DPDLLIRTSGEQRISNFLLWQLAYAELHITEVLWPDFNAEALLSALLDYQNRQRRFGGV 254
>gi|325929596|ref|ZP_08190710.1| Undecaprenyl pyrophosphate synthetase [Xanthomonas perforans
91-118]
gi|325540106|gb|EGD11734.1| Undecaprenyl pyrophosphate synthetase [Xanthomonas perforans
91-118]
Length = 244
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 133/232 (57%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R PR GHR G N + E G+ LT+FAFS NW R
Sbjct: 2 PRHIAIIMDGNGRWAQRRRRPRMIGHRAGARAVNRTIDFCLEKGVSALTLFAFSSENWGR 61
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL L + L++ ++VR IG+R + + AE T N+ L
Sbjct: 62 PQDEVDALMKLFLHALDREVEELQRRGVQVRFIGDRSRFAAPLRERMAGAERSTATNSRL 121
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA +Y R +I+ A + + +D+ +G + +D +L++ + +D+P PDL IRTGG
Sbjct: 122 VLSIAASYGGRQDIAAAARALAEDVAAGRLQPEQIDEALLSSRVALADLPAPDLFIRTGG 181
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+ R+S+FLLWQ+AY+E F WP+F + AL+ + R+RRFG S +
Sbjct: 182 DTRISNFLLWQLAYTELWFTETLWPEFDAGVLQQALDDFAGRERRFGLTSAQ 233
>gi|208435115|ref|YP_002266781.1| putative undecaprenylpyrophosphate synthase [Helicobacter pylori
G27]
gi|208433044|gb|ACI27915.1| putative undecaprenylpyrophosphate synthase [Helicobacter pylori
G27]
Length = 234
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/227 (38%), Positives = 136/227 (59%), Gaps = 1/227 (0%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPK 66
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
SE+ L+K++K +LK + NNI+ R IG+ ++ + + E+ TR
Sbjct: 67 SEVDFLMKMLKKYLKDERSTYLDNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFTQ 126
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A NY S++E+SRA K++ + S +++ I+ LDT D+P+ DL++RTGGE
Sbjct: 127 VLALNYGSKNELSRAFKSLLESPPSHINPLESLENE-ISNRLDTHDLPEVDLLLRTGGEM 185
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 186 RLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 232
>gi|290473662|ref|YP_003466534.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase)
[Xenorhabdus bovienii SS-2004]
gi|289172967|emb|CBJ79738.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase)
[Xenorhabdus bovienii SS-2004]
Length = 231
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/221 (39%), Positives = 132/221 (59%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA RG R GHR G++ V+ + + I++LT++AFS NW RP E+S
Sbjct: 1 MDGNGRWAKQRGKLRVFGHRAGVKAVRVAVSFSVKHNIESLTLYAFSSENWNRPQQEVSS 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L L SL K+N+K+ VIG+ + ++ + + T NTGL L IA N
Sbjct: 61 LMELFVFALDNEVKSLHKHNVKLSVIGDISRFSSRLQERIRRSVELTAGNTGLQLNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R ++ + +K I + I + + ++ + + ++ S+ P+ DL+IRTGGE R+S+F
Sbjct: 121 YGGRWDLVQGVKQIAEKIRANELEPEEITEATVGSVINLSEQPEVDLVIRTGGEHRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
LLWQ+AY+E F WPDF +F A+N + R+RRFGG
Sbjct: 181 LLWQIAYAELYFTDILWPDFDETVFEGAINAFVKRERRFGG 221
>gi|78213156|ref|YP_381935.1| undecaprenyl pyrophosphate synthetase [Synechococcus sp. CC9605]
gi|78197615|gb|ABB35380.1| undecaprenyl diphosphate synthase [Synechococcus sp. CC9605]
Length = 260
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/229 (37%), Positives = 134/229 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA ++GLPR GHR G+E + ++ GI LT +AFS NW R
Sbjct: 27 PQHVALIMDGNGRWAKSQGLPRVMGHRAGVEALKSTLRLCSDWGIHALTAYAFSTENWSR 86
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L + L+ +L+ +++R +G+ +L + ++ +A +T N G+
Sbjct: 87 PGEEVNFLMTLFERVLQAELQALEAEQVRIRFLGDLKALPQKLQELIADATARTAGNNGI 146
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ + NY R E+ +A + + Q +G + +D + IA L T+ DPDL+IRT G
Sbjct: 147 HFNVCTNYGGRRELVQAAQRLAQRAAAGELDPDSIDENSIAAELFTAGEQDPDLLIRTSG 206
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+FLLWQ+AY+E WPDF+ + AL + R RRFGGL
Sbjct: 207 EHRISNFLLWQLAYAEIHVTDVLWPDFNADALKAALLDFQRRHRRFGGL 255
>gi|319789895|ref|YP_004151528.1| undecaprenyl diphosphate synthase [Thermovibrio ammonificans HB-1]
gi|317114397|gb|ADU96887.1| undecaprenyl diphosphate synthase [Thermovibrio ammonificans HB-1]
Length = 230
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/229 (41%), Positives = 131/229 (57%), Gaps = 6/229 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+GIIMDGNGRWA RGLPR GHR G + IV AA+ +GI+ L++FAFS NW+R
Sbjct: 7 PVHVGIIMDGNGRWAKRRGLPRIEGHRVGAQTTERIVIAASNIGIRYLSLFAFSTENWKR 66
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L L+ +++ +NN++ R +G L + E+QT TG+
Sbjct: 67 PKEEVNFLFHLMYEYVRSKLNLFLENNVRFRAMGRLWELPTYLREGFAWMEEQTAHCTGM 126
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
A NY R E+ A + + ++ + KYL ++PD DL+IRT G
Sbjct: 127 TAVFAVNYGGRQELLDAFNR------AVAAGERELTEDTLRKYLYLPELPDLDLLIRTSG 180
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+FLLWQ AY+E F WPDF+ E F AL Y+ R+RRFGGL
Sbjct: 181 ELRISNFLLWQSAYTELWFTQTLWPDFTEEEFKKALLDYSRRERRFGGL 229
>gi|238751446|ref|ZP_04612938.1| Di-trans,poly-cis-decaprenylcistransferase [Yersinia rohdei ATCC
43380]
gi|238710313|gb|EEQ02539.1| Di-trans,poly-cis-decaprenylcistransferase [Yersinia rohdei ATCC
43380]
Length = 230
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/223 (38%), Positives = 131/223 (58%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA +G R GHR G++ V+ AA + LT++AFS NW RP E+S
Sbjct: 1 MDGNGRWAKKQGKLRVFGHRAGVKSVRRAVSFAANNQLDALTLYAFSSENWNRPAQEVSA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L L SL K+N+++ VIG+ + + ++ +E+ T N GL L IA N
Sbjct: 61 LMELFVRALDSEVKSLHKHNVRLSVIGDISRFSERLQQRIRRSEELTANNDGLKLNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I + ++++ + ++ G + D+ + Y+ + + DL+IRTGGE R+S+F
Sbjct: 121 YGGRWDIIQGVRHLAEQVQRGELQPADISEEALNSYICLHEQSEVDLVIRTGGEHRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LLWQ+AY+E F WPDF +F ALN + R+RRFGG +
Sbjct: 181 LLWQIAYAELYFTDVLWPDFDEHVFEGALNAFAQRERRFGGTT 223
>gi|33240553|ref|NP_875495.1| undecaprenyl pyrophosphate synthase [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|42559768|sp|Q7VBI9|UPPS_PROMA RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|33238081|gb|AAQ00148.1| Undecaprenyl pyrophosphate synthase [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 266
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/229 (38%), Positives = 126/229 (55%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA A+ LPR GH G++ + + + GI LT++AFS NW R
Sbjct: 28 PEHIAIIMDGNGRWANAKKLPRAMGHSAGVDALKQTLRLCNDWGIGVLTVYAFSTENWSR 87
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L + LKK +L +++ +G+ L + ++ EA + T N G+
Sbjct: 88 PKEEVNFLMTLFERVLKKELEALNLEEVQISFLGDLDQLPTRLQDLINEATELTSGNNGI 147
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ NY R E+ A + + Q + G + +D A L TS DPDL+IRT G
Sbjct: 148 RFNVCTNYGGRRELVLAAQKLAQRVLQGDLDPSFIDEHTFAGELLTSSYADPDLLIRTSG 207
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+FLLWQ+AY+E WPDF AL Y R RRFGG+
Sbjct: 208 EMRISNFLLWQLAYAEIHVTDTLWPDFDSISLTKALIDYQSRRRRFGGV 256
>gi|152993421|ref|YP_001359142.1| undecaprenyl diphosphate synthase [Sulfurovum sp. NBC37-1]
gi|151425282|dbj|BAF72785.1| undecaprenyl diphosphate synthase [Sulfurovum sp. NBC37-1]
Length = 229
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 133/236 (56%), Gaps = 8/236 (3%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEI-VAAAAEVGIKNLTIFAFS 64
M + ++ IIMDGNGRWA RGL R GH +G E+ ++ V A I+ +T +AFS
Sbjct: 1 MPKTTLKNLAIIMDGNGRWAQQRGLNRTKGHEQGAEIIRDVTVYCAKHPSIETVTFYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+ L+KL+ +L+K + + NN+ IGN + D + +K E+ T
Sbjct: 61 TENWKRPKLEVEFLMKLLDRYLQKELDTYQNNNVCFEAIGNIGAFSDKLQKRIKITEEAT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
R NT L +A NY R EI+ A+ + + + V D+ S+L Y D DL
Sbjct: 121 RNNTDLTHILALNYGGRAEITAAVNKLITEGKK-EVTEADISSALQTPY------SDIDL 173
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
+IRT GE+R+S++LLWQ++Y+E F WPDF+ + + + R RRFGGL+
Sbjct: 174 LIRTSGEERISNYLLWQISYAELYFTETLWPDFTTQELDEIVTDFEQRTRRFGGLA 229
>gi|218296044|ref|ZP_03496813.1| undecaprenyl diphosphate synthase [Thermus aquaticus Y51MC23]
gi|218243421|gb|EED09950.1| undecaprenyl diphosphate synthase [Thermus aquaticus Y51MC23]
Length = 263
Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/236 (38%), Positives = 136/236 (57%), Gaps = 12/236 (5%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+G+I+DGN R+A A GLP GH G++ E++ E+GI+ +T++ FS N+RR
Sbjct: 30 PRHLGLILDGNRRYARALGLPPTKGHEFGVQKAYEVLEWCLEMGIRTVTVWVFSTENFRR 89
Query: 71 PVSEISELVKLIKSFLKKGF-----YSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
E+ L+ L F+++ + + +N ++VR IG R ++ ++ E +TR
Sbjct: 90 SPEEVEALMGL---FVREAERMAEDHRILENQVQVRFIGRREGFSPEVRAAMERLEARTR 146
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDVPD 181
+ G+ L IA Y R+EI A+K++ + E + +V +L I K L T+ +PD
Sbjct: 147 HHQGMVLNIAMGYGGREEIVDAVKSLLLEAEERGLSPKEVAEALTAEEIGKRLYTAGLPD 206
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PD IIRT GE RLS FLLWQ AYSEF F WP+F + F AL Y R+RRFG
Sbjct: 207 PDFIIRTSGEIRLSGFLLWQSAYSEFYFADVLWPEFRKIDFLRALRSYQARERRFG 262
>gi|317013004|gb|ADU83612.1| undecaprenyl pyrophosphate synthase [Helicobacter pylori
Lithuania75]
Length = 234
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/227 (38%), Positives = 136/227 (59%), Gaps = 1/227 (0%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPK 66
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
SE+ L+K++K +LK + NNI+ R IG+ ++ + E+ TR
Sbjct: 67 SEVDFLMKMLKKYLKDERSTYLDNNIRFRAIGDLEGFSKELRDTILRLENDTRHFKDFTQ 126
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A NY S++E+SRA K++ ++ S +++ I+ LDT D+P+ DL++RTGGE
Sbjct: 127 VLALNYGSKNELSRAFKSLLENPPSHINPLESLENE-ISNRLDTCDLPEVDLLLRTGGEM 185
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 186 RLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 232
>gi|296241890|ref|YP_003649377.1| undecaprenyl pyrophosphate synthetase [Thermosphaera aggregans DSM
11486]
gi|296094474|gb|ADG90425.1| Undecaprenyl pyrophosphate synthetase [Thermosphaera aggregans DSM
11486]
Length = 271
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/230 (41%), Positives = 132/230 (57%), Gaps = 3/230 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR- 69
P+HIGII DGN RWA GL GH G E E + ++ IK++TI+A S N +
Sbjct: 41 PNHIGIIPDGNRRWARRIGLEPAEGHLFGYEKIKETLRWIWDLNIKHVTIYAMSTENCKH 100
Query: 70 RPVSEISELVKLIKSFLK--KGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
RP E +L +L L K + K+ ++VRVIG+ + ++ +K E++T+
Sbjct: 101 RPPEEREKLFELAFKGLNELKNLPEIHKHRVRVRVIGDYSLVPSHLISAIKALEEETKNY 160
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L IA Y R EI AIK I D+ G + +D+ + KYL T+D PDPDLIIR
Sbjct: 161 DNYTLNIALCYGGRQEILDAIKKIVNDVVEGKLDPNDISEEVFKKYLYTNDSPDPDLIIR 220
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
T GE+R+S+FLLWQ AYSE F YWP+F + F+ A+ Y R+RRFG
Sbjct: 221 TSGEERISNFLLWQSAYSELYFCDVYWPEFRKIDFWRAIRSYQFRERRFG 270
>gi|317009901|gb|ADU80481.1| undecaprenyl pyrophosphate synthase [Helicobacter pylori India7]
Length = 234
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/227 (37%), Positives = 136/227 (59%), Gaps = 1/227 (0%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ +IMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 7 HLAVIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPK 66
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
SE+ L+K++K +LK + NNI+ + IG+ ++ + + E+ TR
Sbjct: 67 SEVDFLMKMLKKYLKDERSTYLDNNIRFKAIGDLEGFSKELRDTILQLENDTRHFKDFTQ 126
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A NY S++E+SRA K++ + S +++ I+ LDT D+P+ DL++RTGGE
Sbjct: 127 VLALNYGSKNELSRAFKSLLESPPSHISLLESLENE-ISNRLDTRDLPEVDLLLRTGGEM 185
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 186 RLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 232
>gi|295835212|ref|ZP_06822145.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. SPB74]
gi|197698197|gb|EDY45130.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. SPB74]
Length = 251
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/245 (36%), Positives = 137/245 (55%), Gaps = 13/245 (5%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A+ + P H+ +MDGNGRWA R LPR AGHR +++ AA G++ L+++A
Sbjct: 8 AAAPTGRGPRHVACVMDGNGRWAQRRSLPRTAGHRAAEATVIDVIEAARSAGVEWLSLYA 67
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDIL--CVLKEA 120
FS NW RP +E+ L+ L++ ++K L I+ RV+G DD L + ++
Sbjct: 68 FSTENWSRPDAEVGYLMDLVRHTVRKHAPLLHARGIRCRVLG----ADDPRLPAPLARDF 123
Query: 121 EDQTRLNTG---LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
D L G + L +AF++ R +I A +++ + V + +V A +L
Sbjct: 124 ADLATLTAGNRRMTLTVAFDHGGRGDIVAAARSLIR----AGVPADEVTERAFAAHLPFP 179
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
D PD DL+IRT GE+R+S+F+LWQVAY+E+VF WPDF F L+ Y R+RRFG
Sbjct: 180 DTPDVDLVIRTSGEQRISNFMLWQVAYAEWVFPTVLWPDFRAPHFLECLHHYRHRERRFG 239
Query: 238 GLSKK 242
G+ +
Sbjct: 240 GVPAQ 244
>gi|146329490|ref|YP_001209627.1| undecaprenyl diphosphate synthase [Dichelobacter nodosus VCS1703A]
gi|146232960|gb|ABQ13938.1| undecaprenyl diphosphate synthase [Dichelobacter nodosus VCS1703A]
Length = 247
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/229 (35%), Positives = 133/229 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA R PR GHR+G + + AAA+ G++ L++FAFS NW R
Sbjct: 7 PRHVAVIMDGNGRWAKMRQKPRVFGHRQGRNSVEKTIRAAADSGVETLSLFAFSTENWSR 66
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EI +++LI+ + +L + +I++R +G R L + L+ AE T+ +
Sbjct: 67 PSMEIGLIMELIQRSIVDEAETLCRQDIRLRFLGRRDKLSASLQENLQWAEALTKNCQRM 126
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ A +YS I ++++ + + +G++ + +D ++ D+P DL+IR+ G
Sbjct: 127 QVIFAIDYSGHWGILETVRHLAKQVSAGTLSAEQIDEAVFEAARPMPDLPPVDLLIRSSG 186
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+F LW++AY+E F WPDF LF A+ Y R+RR+GGL
Sbjct: 187 ELRISNFHLWEIAYAELFFTDTLWPDFDESLFREAICAYQARERRYGGL 235
>gi|326381620|ref|ZP_08203314.1| undecaprenyl diphosphate synthase [Gordonia neofelifaecis NRRL
B-59395]
gi|326199867|gb|EGD57047.1| undecaprenyl diphosphate synthase [Gordonia neofelifaecis NRRL
B-59395]
Length = 266
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/227 (38%), Positives = 131/227 (57%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI ++MDGNGRWA RGLPR GH++G V + V E+G+ +L+ +AFS NW R
Sbjct: 38 PRHIALVMDGNGRWAKERGLPRTEGHKRGEAVLMDSVCGCIEMGVTHLSAYAFSTENWSR 97
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ + + ++VR G R L ++ L+ AE+ T NT +
Sbjct: 98 SPEEVKFLMGFNRDVIRRRRDEMNEMGVRVRWAGRRPKLWRSVIKELEVAEELTEDNTVM 157
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R EI+ A + I + G + + + A+YLD D+PD DL +R G
Sbjct: 158 TLTMCVNYGGRAEIADAAREIARRAARGEIDPERITEASFARYLDEPDMPDVDLFLRPSG 217
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+RLS+FLLWQ AY+E V+ + +PDF R + A +Y RDRRFG
Sbjct: 218 EQRLSNFLLWQSAYAEMVYQEKLFPDFDRRDLWAACLEYAKRDRRFG 264
>gi|307637894|gb|ADN80344.1| Undecaprenyl pyrophosphate synthetase [Helicobacter pylori 908]
gi|325996491|gb|ADZ51896.1| Undecaprenyl pyrophosphate synthetase [Helicobacter pylori 2018]
gi|325998079|gb|ADZ50287.1| Undecaprenyl pyrophosphate synthetase [Helicobacter pylori 2017]
Length = 234
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 139/229 (60%), Gaps = 5/229 (2%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ +IMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 7 HLAVIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPK 66
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
SE+ L+K++K +LK + NNI+ R IG+ ++ + E+ TR
Sbjct: 67 SEVDFLMKMLKKYLKDERSTYLDNNIRFRAIGDLEGFSKELRDTILRLENDTRHFKDFTQ 126
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDS--SLIAKYLDTSDVPDPDLIIRTGG 190
+A NY S++E+SRA K++ +ES ++++S + I+ LDT D+P+ DL++RTGG
Sbjct: 127 VLALNYGSKNELSRAFKSL---LESPPSHINNIESLENEISHRLDTHDLPEVDLLLRTGG 183
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 184 EMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 232
>gi|119952922|ref|YP_945131.1| undecaprenyl pyrophosphate synthase [Borrelia turicatae 91E135]
gi|119861693|gb|AAX17461.1| undecaprenyl pyrophosphate synthetase [Borrelia turicatae 91E135]
Length = 230
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/233 (41%), Positives = 139/233 (59%), Gaps = 4/233 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M ++S P H+GIIMDGN RWA RGL GH++G++ EIV + ++GIK L+++ FS
Sbjct: 1 MNNNSLPMHVGIIMDGNRRWALKRGLSLFEGHKEGLKRAKEIVKYSLKLGIKYLSLYVFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW R SEI L+ +I +L F NNIK+ V G +L ++ + +A D T
Sbjct: 61 TENWNRTKSEIKHLMFVIADYLSSEFEFYSTNNIKILVSGEIEALSKEVRKSIIDAIDFT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ GL L +A NY R+EI RA K I + SG C +D + +K+LD ++ D DL
Sbjct: 121 KNFDGLVLNLAINYGGRNEIVRATKKI---LGSGLQC-ETLDEIVFSKFLDNPELCDLDL 176
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+IRTGG+ R+S+FLLW++AY EFVF WP++S + L + R R FG
Sbjct: 177 LIRTGGDMRISNFLLWRIAYCEFVFSSVLWPEYSVSHYDKDLECFKNRKRNFG 229
>gi|291086156|ref|ZP_06354977.2| di-trans,poly-cis-decaprenylcistransferase [Citrobacter youngae
ATCC 29220]
gi|291068947|gb|EFE07056.1| di-trans,poly-cis-decaprenylcistransferase [Citrobacter youngae
ATCC 29220]
Length = 229
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 132/221 (59%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA +G R GH+ G + V+ AA GI LT++AFS NW RP E+S
Sbjct: 1 MDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIDALTLYAFSSENWNRPAQEVSA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L L +L ++N+++R+IG+ + + ++++E T NTGL L IA N
Sbjct: 61 LMELFVWALDSEVKNLHRHNVRLRIIGDISRFNSRLQERIRKSEALTAQNTGLTLNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I + ++ + Q ++ G + +D ++ + + ++ DL+IRTGGE R+S+F
Sbjct: 121 YGGRWDIVQGVRQLAQQVQEGLLRPEQIDEEMLGQQICMHELAPVDLVIRTGGEHRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
LLWQ+AY+E F WPDF + F AL+ + R+RRFGG
Sbjct: 181 LLWQIAYAELYFTDVLWPDFDEQDFEGALHAFANRERRFGG 221
>gi|289523070|ref|ZP_06439924.1| di-trans,poly-cis-decaprenylcistransferase [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289503613|gb|EFD24777.1| di-trans,poly-cis-decaprenylcistransferase [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 223
Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/224 (41%), Positives = 126/224 (56%), Gaps = 5/224 (2%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA R LPR GH G++ + V AA E+GI+ L++FAFS NW RP E+
Sbjct: 1 MDGNGRWARQRHLPRIMGHYAGVKAVEKTVMAALEMGIRYLSLFAFSTENWTRPKGEVLG 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L L + ++K L + NI++R G L +D+ + AE +T L+L + N
Sbjct: 61 LFGLFRYYIKCKVKKLVEENIRLRFSGRIDKLPEDLRDLAFWAEKETEAGDKLDLILCLN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCS--HDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLS 195
Y R EI A+ I + + + C ++D YL DVPDPDLIIRT GEKRLS
Sbjct: 121 YGGRQEIIDAVNKI---LAAKTDCDDVSEIDEYYFRGYLYLPDVPDPDLIIRTSGEKRLS 177
Query: 196 DFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+F LWQ +YSE F WP+F A+ +Y R+RR+GG+
Sbjct: 178 NFWLWQSSYSELYFTDCLWPEFDEGKLREAVEEYQKRERRYGGI 221
>gi|15612207|ref|NP_223860.1| undecaprenyl pyrophosphate synthase [Helicobacter pylori J99]
gi|10720342|sp|Q9ZK05|UPPS_HELPJ RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|4155749|gb|AAD06728.1| putative [Helicobacter pylori J99]
Length = 234
Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 136/227 (59%), Gaps = 1/227 (0%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPK 66
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
SE+ L+K++K +LK + NNI+ R IG+ ++ + E+ TR
Sbjct: 67 SEVDFLMKMLKKYLKDERSTYLDNNIRFRAIGDLEGFSKELRDTILRLENDTRYFKDFTQ 126
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A NY S++E+SRA K++ ++ + + + + I+ LDT D+P+ DL++RTGGE
Sbjct: 127 VLALNYGSKNELSRAFKSLLEN-PPNHINNIESLENEISHRLDTHDLPEVDLLLRTGGEM 185
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 186 RLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 232
>gi|42520390|ref|NP_966305.1| undecaprenyl diphosphate synthase [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|99034959|ref|ZP_01314763.1| hypothetical protein Wendoof_01000405 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
gi|225629852|ref|ZP_03787763.1| undecaprenyl diphosphate synthase [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|42410128|gb|AAS14239.1| undecaprenyl diphosphate synthase [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|225591296|gb|EEH12425.1| undecaprenyl diphosphate synthase [Wolbachia endosymbiont of
Muscidifurax uniraptor]
Length = 231
Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/235 (42%), Positives = 137/235 (58%), Gaps = 12/235 (5%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S P H+ IIMDGNGRWA +G + G++KG EV +I ++ I LT++AFS+
Sbjct: 4 QESLPKHLAIIMDGNGRWANNQGRVKIDGYKKGSEVAYDIAKYCTDLTIPYLTLYAFSME 63
Query: 67 NWRRPVSEISELVKLIKSFL----KKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
NW RP +E L L S L K F + NIK+ IGN L IL +K+AE+
Sbjct: 64 NWLRPKNETDCLFDLFYSVLTNEDKVNF--IYNCNIKLNFIGNLSLLPSKILDQIKKAEE 121
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T N GL L +A +Y ++ EI++AI NI + E+ + S + K+L T D+P
Sbjct: 122 MTHKNDGLLLTVAVSYGAKQEITQAISNIIK--ENIAYVSEEE----FEKFLYTKDLPKL 175
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRTGGEKRLS+FLLWQ AY+E F WPDFS + AL Y R++++G
Sbjct: 176 DLLIRTGGEKRLSNFLLWQAAYAELYFCDTLWPDFSCQDLSKALEDYTKREKKYG 230
>gi|203284045|ref|YP_002221785.1| undecaprenyl diphosphate synthase [Borrelia duttonii Ly]
gi|201083488|gb|ACH93079.1| undecaprenyl diphosphate synthase [Borrelia duttonii Ly]
Length = 230
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 94/233 (40%), Positives = 138/233 (59%), Gaps = 4/233 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M S+S P H+GIIMDGN RWA +GL GH++G++ EIV + E+GIK L+++ FS
Sbjct: 1 MSSNSLPSHVGIIMDGNRRWALKKGLSFFEGHKEGLKRAKEIVKHSCELGIKCLSLYVFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW R SEI L+ LI +L F +NNI+V V G+ +L + +++A + T
Sbjct: 61 TENWNRTNSEIEHLMFLIADYLSSEFKFYAENNIRVVVSGDIETLSQKVKKSIEDATNYT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ GL L +A NY R+EI RAIK + + + ++ AK+LD ++ D DL
Sbjct: 121 KNFDGLILNLAINYGGRNEIVRAIKKVL----AKGLSVETLNEVEFAKFLDNQELGDLDL 176
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+IRTGG+ R+S+FLLW++AY EF+F WPD+ + L + R R FG
Sbjct: 177 LIRTGGDMRVSNFLLWRLAYCEFIFSNVLWPDYFVFHYERDLECFKNRKRNFG 229
>gi|57641108|ref|YP_183586.1| undecaprenyl diphosphate synthase [Thermococcus kodakarensis KOD1]
gi|73920272|sp|Q5JGE1|UPPS_PYRKO RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|57159432|dbj|BAD85362.1| undecaprenyl diphosphate synthase [Thermococcus kodakarensis KOD1]
Length = 264
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/239 (36%), Positives = 138/239 (57%), Gaps = 2/239 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + S + P H+ IIMDGN RWA P GH G + EI+ E+ I+ LT+
Sbjct: 25 LLEKVKSGNIPKHVAIIMDGNRRWARKLEKPPWYGHLFGSKKLEEILEWCRELNIRTLTV 84
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFS N++R E+ L+ L + K+ + + I+V V+G + L +++ +
Sbjct: 85 YAFSTENFKRSKEEVEALMNLFEEKFKELVQDERVHRYGIRVNVLGRKDMLPENVRKAAE 144
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
EAE TR + NL IA Y R EI+ A++ I +D+ G + D+D I +YL +
Sbjct: 145 EAERATRKYSNYNLNIALAYGGRSEIADAVREIVRDVLEGKIKPEDIDEEAIKRYLYYPN 204
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+PDPD++IRTGGE R+S+FLL+Q+AYSE F+ Y+P+F + F + ++ R RRFG
Sbjct: 205 MPDPDIVIRTGGEVRISNFLLYQIAYSELFFVDVYFPEFRKIDFLRIIREFQKRQRRFG 263
>gi|46204828|ref|ZP_00049422.2| COG0020: Undecaprenyl pyrophosphate synthase [Magnetospirillum
magnetotacticum MS-1]
Length = 220
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 94/223 (42%), Positives = 129/223 (57%), Gaps = 11/223 (4%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA+ARGLPR AGHR G++ + A ++GI LT++AFS +NWRRP E+
Sbjct: 1 MDGNGRWASARGLPRGAGHRAGVKTIQRVAEVAPDLGIGTLTLYAFSSDNWRRPAEEVGG 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L++++L+ L + ++ VIG R L I + AE T L+L IA +
Sbjct: 61 LMRLLRAYLRGETERLARTGTRLSVIGRRDRLPAGIPEAIARAEAATAAGDRLHLRIAVD 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
YSSRD I A + + + + +L A D DL+IRTGGEKRLSDF
Sbjct: 121 YSSRDAILAAAARLGPE----GLSREGLSGALGAD-------GDVDLLIRTGGEKRLSDF 169
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LLW+ AY+E F WPDF A+ ++ RDRRFGGL+
Sbjct: 170 LLWEAAYAELHFTDRMWPDFGTADLATAIADFSARDRRFGGLN 212
>gi|28493253|ref|NP_787414.1| undecaprenyl pyrophosphate synthase [Tropheryma whipplei str.
Twist]
gi|28572635|ref|NP_789415.1| undecaprenyl pyrophosphate synthetase [Tropheryma whipplei TW08/27]
gi|42559958|sp|Q83GJ0|UPPS1_TROWT RecName: Full=Undecaprenyl pyrophosphate synthase 1; Short=UPP
synthase 1; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase 1;
AltName: Full=Undecaprenyl diphosphate synthase 1;
Short=UDS 1
gi|42559959|sp|Q83HN8|UPPS2_TROW8 RecName: Full=Undecaprenyl pyrophosphate synthase 2; Short=UPP
synthase 2; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase 2;
AltName: Full=Undecaprenyl diphosphate synthase 2;
Short=UDS 2
gi|28410767|emb|CAD67153.1| undecaprenyl pyrophosphate synthetase [Tropheryma whipplei TW08/27]
gi|28476294|gb|AAO44383.1| undecaprenyl pyrophosphate synthetase [Tropheryma whipplei str.
Twist]
Length = 249
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/229 (38%), Positives = 137/229 (59%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P H+ ++MDGNGRWA R LPR GH+ G ++VA A +VG+ L+++ FS NW
Sbjct: 20 SLPRHVAVVMDGNGRWANQRNLPRIEGHKAGESALIDVVAGAVQVGVPYLSLYVFSTENW 79
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
R E+ L++ + + + ++VR G L ++ L++ E+ T+ NT
Sbjct: 80 LRAPDEVRFLLRFTRDVIARRRELFAHWGVRVRWSGVPNRLGKVLVKELRDTEEITKKNT 139
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+NL + NY SR EI AIK+I D+ SG + + V+ +I++ + D PD DL +R+
Sbjct: 140 AMNLNVCLNYGSRQEIVNAIKSIVSDVNSGLISAKSVNEKIISRRMYMPDFPDVDLFLRS 199
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
GE R+S+F+LWQ AY+E +F+ + WPDF R+ F+ AL Y+ R RRFG
Sbjct: 200 SGENRMSNFMLWQSAYAELIFMSKLWPDFRRDDFWAALRAYSGRSRRFG 248
>gi|254172267|ref|ZP_04878943.1| undecaprenyl pyrophosphate synthetase 1 [Thermococcus sp. AM4]
gi|214034163|gb|EEB74989.1| undecaprenyl pyrophosphate synthetase 1 [Thermococcus sp. AM4]
Length = 264
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 90/239 (37%), Positives = 138/239 (57%), Gaps = 2/239 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + S + P H+ IIMDGN RWA P GH G EI+ E+GI+ LT+
Sbjct: 25 LFERVKSGNIPRHVAIIMDGNRRWARKLEKPPWYGHFFGSRKLEEILDWCRELGIRTLTV 84
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFS N++R E++ L+ L + K+ + + I+V V+G + L +++ +
Sbjct: 85 YAFSTENFKRSREEVTALMNLFEEKFKELIEDERVHRYGIRVNVLGRKELLPENVRKAAE 144
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
EAE TR L IA Y R EI+ A+K+I D+ +G + ++D LI +YL +
Sbjct: 145 EAERATRKYNNYTLNIALAYGGRSEIADAVKDIVNDVLAGRLKPEEIDEDLIKRYLYYPN 204
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+PDPD++IRTGGE R+S+FLL+Q+AYSE F+ Y+P+F + F + +Y R RRFG
Sbjct: 205 MPDPDIVIRTGGEVRISNFLLYQIAYSELFFVDVYFPEFRKIDFLRIIREYQKRQRRFG 263
>gi|295098666|emb|CBK87756.1| Undecaprenyl pyrophosphate synthetase [Enterobacter cloacae subsp.
cloacae NCTC 9394]
Length = 229
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 86/226 (38%), Positives = 134/226 (59%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA +G R GH+ G + V+ AA GI LT++AFS NW RP E++
Sbjct: 1 MDGNGRWAKRQGKIRAFGHKAGAKSVRRAVSFAANNGIDALTLYAFSSENWNRPAQEVTA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L L SL ++N+++R+IG + + +++AE T NTGL L IA N
Sbjct: 61 LMELFVWALDSEVKSLHRHNVRLRIIGETSRFNSRLQERIRKAEALTENNTGLTLNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I + ++++ + ++ G + +D +++ + +++ DL+IRTGGE R+S+F
Sbjct: 121 YGGRWDIIQGVRHLAEQVQEGLLRPDQIDEEALSQQICMNELAPVDLVIRTGGEHRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
LLWQ+AY+E F WPDF + F AL+ + R+RRFGG G
Sbjct: 181 LLWQIAYAELYFTDVLWPDFDEQDFEGALHAFANRERRFGGTEPGG 226
>gi|332157818|ref|YP_004423097.1| hypothetical protein PNA2_0175 [Pyrococcus sp. NA2]
gi|331033281|gb|AEC51093.1| hypothetical protein PNA2_0175 [Pyrococcus sp. NA2]
Length = 264
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 90/239 (37%), Positives = 138/239 (57%), Gaps = 2/239 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + S P H+ IIMDGN RWA P GH G + EI+ E+GI+ LT+
Sbjct: 25 LIEKVRSGVLPKHVAIIMDGNRRWARKYDKPPWYGHFFGSKKLEEILEWCHELGIRILTV 84
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFS N++R E+ +L++L + ++ + + I+V VIG + L + +
Sbjct: 85 YAFSTENFKRSKEEVEKLMELFERKFRELVSDKRVHEYGIRVNVIGRKELLPKSVRDAAE 144
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
EAE TR L +A Y R EI A+K+I +D+ G + D+D L+ KYL +
Sbjct: 145 EAERVTRKYNNYILNVALAYGGRSEIVDAVKDIVRDVMEGKIKVEDIDEELLKKYLYVPN 204
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+PDPD++IRTGGE R+S+FLL+Q+AYSE F+ Y+P+F + F + +Y R+RRFG
Sbjct: 205 MPDPDIVIRTGGEVRISNFLLYQIAYSELFFVDVYFPEFRKIDFLRIIREYQKRERRFG 263
>gi|149186827|ref|ZP_01865137.1| undecaprenyl diphosphate synthase [Erythrobacter sp. SD-21]
gi|148829494|gb|EDL47935.1| undecaprenyl diphosphate synthase [Erythrobacter sp. SD-21]
Length = 228
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/226 (38%), Positives = 134/226 (59%), Gaps = 9/226 (3%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ +IMDGNGRWA + LPR GHRKG+E E+V + I+ LT++AFS NW+RP
Sbjct: 11 HVAVIMDGNGRWAKRKHLPRAMGHRKGVEAVRELVRSLKHTEIECLTLYAFSSENWKRPE 70
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+ +L+ L++ F+K N++K+ ++G+ L DI+ +L++A +QT L
Sbjct: 71 DEVDDLMNLMRKFIKSDLPEFVANDVKLHILGDWRGLAPDIVAMLEDALEQTS-GGSRTL 129
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A NY + + E GS+ ++++L ++ +P DL+IRT GE
Sbjct: 130 AVALNYGA---QAEIAAAARAAAEQGSITEEAIEANLY-----SAGLPPLDLLIRTSGEV 181
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
RLS+FLLWQ AY+E +F WPDF+ E AL+Q+ R+RRFGG
Sbjct: 182 RLSNFLLWQAAYAEMIFTEVLWPDFTPEHLRDALDQFAGRERRFGG 227
>gi|308184966|ref|YP_003929099.1| undecaprenyl pyrophosphate synthase [Helicobacter pylori SJM180]
gi|308060886|gb|ADO02782.1| undecaprenyl pyrophosphate synthase [Helicobacter pylori SJM180]
Length = 234
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 135/227 (59%), Gaps = 1/227 (0%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPK 66
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
SE+ L+K++K +LK + NNI+ R IG+ ++ + E TR
Sbjct: 67 SEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILRLESDTRHFKDFTQ 126
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A NY S++E+SRA K++ ++ + +++ I+ LDT D+P+ DL++RTGGE
Sbjct: 127 VLALNYGSKNELSRAFKSLLENPPNNMDPLESLENE-ISHRLDTHDLPEVDLLLRTGGEM 185
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 186 RLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 232
>gi|240256454|ref|NP_568884.4| dehydrodolichyl diphosphate synthase [Arabidopsis thaliana]
gi|83305680|sp|Q570Q8|DDPS5_ARATH RecName: Full=Dehydrodolichyl diphosphate synthase 5;
Short=Dedol-PP synthase 5
gi|8843800|dbj|BAA97348.1| cis-prenyltransferase homolog-like; undecaprenyl phosphate
synthetase-like [Arabidopsis thaliana]
gi|332009716|gb|AED97099.1| dehydrodolichyl diphosphate synthase 5 [Arabidopsis thaliana]
Length = 302
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 125/221 (56%), Gaps = 2/221 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +I+DGN RWA RGL GH G E +G +++FAFS NW R
Sbjct: 71 PKHVAVILDGNRRWAEKRGLGTSEGHEAGARRLMENAKDCFAMGTNTISLFAFSTENWER 130
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L + +L L+ + IK+ VIGNR L + +L +++E E+ T+ G
Sbjct: 131 PEDEVKCLMALFEKYLASDMPYLRSDKIKISVIGNRTKLPESLLGLIEEVEEATKSYEGK 190
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT--SDVPDPDLIIRT 188
NL IA +YS R +I +A K++ ++ G + D++ + K L T S+ P+PDL+IRT
Sbjct: 191 NLIIAIDYSGRYDILQACKSLANKVKDGLIQVEDINEKAMEKELLTKCSEFPNPDLLIRT 250
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQY 229
GE+R+S+F LWQ AY+E F WPDF + AL Y
Sbjct: 251 SGEQRISNFFLWQSAYTELYFPTVLWPDFGEAEYLEALTWY 291
>gi|317014607|gb|ADU82043.1| undecaprenyl pyrophosphate synthase [Helicobacter pylori
Gambia94/24]
Length = 234
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/229 (38%), Positives = 138/229 (60%), Gaps = 5/229 (2%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPK 66
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
SE+ L+K++K +LK + NNI+ R IG+ ++ + E TR
Sbjct: 67 SEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILRLESDTRHFKDFTQ 126
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDS--SLIAKYLDTSDVPDPDLIIRTGG 190
+A NY S++E+SRA K++ +ES ++++S + I+ LDT D+P+ DL++RTGG
Sbjct: 127 VLALNYGSKNELSRAFKSL---LESPPNHINNIESLENEISHRLDTHDLPEVDLLLRTGG 183
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 184 EMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 232
>gi|217077681|ref|YP_002335399.1| undecaprenyl diphosphate synthase [Thermosipho africanus TCF52B]
gi|217037536|gb|ACJ76058.1| undecaprenyl diphosphate synthase [Thermosipho africanus TCF52B]
Length = 225
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/229 (39%), Positives = 127/229 (55%), Gaps = 6/229 (2%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+HI IMDGNGRWA + PR GH G E+V AE G+K T +AFS NW+RP
Sbjct: 3 NHIAFIMDGNGRWAKKQNKPRMYGHYAGAYKIEEVVRWCAEYGVKYTTFYAFSTENWKRP 62
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E++ + L++S + + + + K +++ G L + I + + +++T+ N +
Sbjct: 63 KGEVNFIFGLLQSKIGEFYERMNKEGVRLVFSGRLKELGEKIYNICMKYQEKTKNNDKIV 122
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+ +A NY R EI AIK I S D+D ++L D+PDPDLIIRT GE
Sbjct: 123 VNMALNYGGRAEIVDAIKKIIDSKIS------DIDEEKFREFLYFPDIPDPDLIIRTSGE 176
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RLS+FL WQ AYSE F WPDFSRE A+ + R RRFGG+
Sbjct: 177 MRLSNFLTWQSAYSELYFTDVLWPDFSREDLDRAIEDFKKRQRRFGGIK 225
>gi|188528008|ref|YP_001910695.1| putative undecaprenyl pyrophosphate synthase [Helicobacter pylori
Shi470]
gi|188144248|gb|ACD48665.1| putative undecaprenyl pyrophosphate synthase [Helicobacter pylori
Shi470]
Length = 234
Score = 172 bits (436), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 135/227 (59%), Gaps = 1/227 (0%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPK 66
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
SE+ L+K++K +LK + NNI+ R IG+ ++ + + E+ T
Sbjct: 67 SEVDFLMKMLKKYLKDERSTYLDNNIRFRAIGDLEGFSKELRETILQLENDTGHFKDFTQ 126
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A NY S++E+SRA K++ + S +++ I+ LDT D+P+ DL++RTGGE
Sbjct: 127 VLALNYGSKNELSRAFKSLLESPPSNISLLESLENE-ISNRLDTCDLPEVDLLLRTGGEM 185
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 186 RLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 232
>gi|331005982|ref|ZP_08329327.1| Undecaprenyl pyrophosphate synthetase [gamma proteobacterium
IMCC1989]
gi|330420227|gb|EGG94548.1| Undecaprenyl pyrophosphate synthetase [gamma proteobacterium
IMCC1989]
Length = 244
Score = 172 bits (436), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 95/233 (40%), Positives = 138/233 (59%), Gaps = 2/233 (0%)
Query: 6 MSSSPP-DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M++SP H+ IIMDGN RWA +G+ +GH+ G+E ++++A + I LT+FAFS
Sbjct: 1 MTASPSLKHVAIIMDGNNRWAKQQGMMGVSGHKAGVERLRDVLSACKDHNINVLTVFAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+ L+ L +L LKK +++RV+G+R +L + +AE Q
Sbjct: 61 SENWQRPEKEVDALMSLFYLYLSNEAKKLKKEGVRLRVMGSRDRFSPKLLKAIDKAE-QV 119
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
L IA +Y + ++++A K I Q + G +DS L+A LD D+P DL
Sbjct: 120 ACEGDRTLVIAADYGGQWDVAQAAKKIAQKVLQGDCAIDAIDSGLVASCLDLPDLPPLDL 179
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+IRTGGEKR+S+FLLWQ AY+E F WPDF RE A+++Y R RRFG
Sbjct: 180 LIRTGGEKRISNFLLWQAAYAELYFSDALWPDFDREALTAAVDEYGNRQRRFG 232
>gi|58697247|ref|ZP_00372636.1| undecaprenyl diphosphate synthase [Wolbachia endosymbiont of
Drosophila simulans]
gi|58698900|ref|ZP_00373765.1| undecaprenyl diphosphate synthase [Wolbachia endosymbiont of
Drosophila ananassae]
gi|225630153|ref|YP_002726944.1| undecaprenyl diphosphate synthase [Wolbachia sp. wRi]
gi|58534581|gb|EAL58715.1| undecaprenyl diphosphate synthase [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58536415|gb|EAL59847.1| undecaprenyl diphosphate synthase [Wolbachia endosymbiont of
Drosophila simulans]
gi|225592134|gb|ACN95153.1| undecaprenyl diphosphate synthase [Wolbachia sp. wRi]
Length = 231
Score = 172 bits (436), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/235 (42%), Positives = 137/235 (58%), Gaps = 12/235 (5%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S P H+ IIMDGNGRWA +G + G++KG EV +I ++ I LT++AFS+
Sbjct: 4 QESLPKHLAIIMDGNGRWANNQGRVKIDGYKKGSEVAYDIAKYCTDLTIPYLTLYAFSME 63
Query: 67 NWRRPVSEISELVKLIKSFL----KKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
NW RP +E L L S L K F + NIK+ IGN L IL +K+AE+
Sbjct: 64 NWLRPKNETDCLFDLFYSVLTNEDKVNF--ICNCNIKLNFIGNLSLLPSKILDQIKKAEE 121
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T N GL L +A +Y ++ EI++AI NI + E+ + S + K+L T D+P
Sbjct: 122 MTHKNDGLLLTVAVSYGAKQEITQAISNIIK--ENIAYVSEEE----FEKFLYTKDLPKL 175
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRTGGEKRLS+FLLWQ AY+E F WPDFS + AL Y R++++G
Sbjct: 176 DLLIRTGGEKRLSNFLLWQAAYAELYFCDTLWPDFSCQDLSKALEDYTKREKKYG 230
>gi|58585061|ref|YP_198634.1| undecaprenyl pyrophosphate synthase [Wolbachia endosymbiont strain
TRS of Brugia malayi]
gi|58419377|gb|AAW71392.1| Undecaprenyl pyrophosphate synthase [Wolbachia endosymbiont strain
TRS of Brugia malayi]
Length = 231
Score = 172 bits (436), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 100/234 (42%), Positives = 134/234 (57%), Gaps = 14/234 (5%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P H+ IIMDGN RWA ++G + G+RKG EV +I + I LT++AFS+ NW
Sbjct: 6 SLPKHLAIIMDGNSRWANSQGRVKIDGYRKGSEVAYDIAKHCIALAIPYLTLYAFSMENW 65
Query: 69 RRPVSEISELVKLIKSFL----KKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
RP E L L S L K F+ NIK+ +GN L IL +KE+E+ T
Sbjct: 66 LRPKEETDCLFDLFYSILTDRDKVNFFH--NYNIKLNFVGNLSLLPGKILNQIKESEEMT 123
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
R N GL L +A +Y ++ EI A++NI ++I+ V K+L T D+P D
Sbjct: 124 RKNDGLLLTVAVSYGAKQEIIHAVRNITRKNIDC-------VSEDEFEKFLYTKDLPKLD 176
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
L+IRTGGEKRLS+FLLWQ AY+E F WPDFS + AL Y R++R+G
Sbjct: 177 LLIRTGGEKRLSNFLLWQAAYAELYFCDTLWPDFSCQDLSKALEDYTKREKRYG 230
>gi|308183326|ref|YP_003927453.1| undecaprenyl pyrophosphate synthase [Helicobacter pylori PeCan4]
gi|308065511|gb|ADO07403.1| undecaprenyl pyrophosphate synthase [Helicobacter pylori PeCan4]
Length = 234
Score = 172 bits (436), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 135/227 (59%), Gaps = 1/227 (0%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPK 66
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
SE+ L+K++K +LK + NNI+ R IG+ ++ + + E+ T
Sbjct: 67 SEVDFLMKMLKKYLKDERSTYLDNNIRFRAIGDLEGFSKELRETILQLENDTGHFKDFTQ 126
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A NY S++E+SRA K++ + S +++ I+ LDT D+P+ DL++RTGGE
Sbjct: 127 VLALNYGSKNELSRAFKSLLESPPSNISLLESLENE-ISNRLDTRDLPEVDLLLRTGGEM 185
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 186 RLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 232
>gi|242399488|ref|YP_002994913.1| Undecaprenyl pyrophosphate synthetase [Thermococcus sibiricus MM
739]
gi|242265882|gb|ACS90564.1| Undecaprenyl pyrophosphate synthetase [Thermococcus sibiricus MM
739]
Length = 268
Score = 172 bits (436), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 89/229 (38%), Positives = 134/229 (58%), Gaps = 2/229 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGN RWA P GH G + EI+ ++GI+ LT++AFS N+ R
Sbjct: 39 PKHIAIIMDGNRRWARILNKPPWYGHLFGSKKLEEILEWCRDLGIRTLTVYAFSTENFNR 98
Query: 71 PVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
E+ L+ L + K+ + + K I+V V+G + L +++ +EAE T+
Sbjct: 99 SKEEVKMLMDLFEKKFKELIHDRRVHKYGIRVNVLGRKELLPENVRKAAEEAEQATKKYN 158
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
NL IA Y R EI A+K I DI+ G + +++D L+ +YL ++ DPD++IRT
Sbjct: 159 NYNLNIAIAYGGRSEIVDAVKRIVDDIQVGKLNKNEIDEKLLKRYLYVPNMTDPDIVIRT 218
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
GGE R+S+FL++Q+AYSE F+ Y+P+F + F + +Y RDRRFG
Sbjct: 219 GGEVRISNFLIYQIAYSELFFVDVYFPEFRKIDFLRIIREYQKRDRRFG 267
>gi|157147394|ref|YP_001454713.1| undecaprenyl pyrophosphate synthase [Citrobacter koseri ATCC
BAA-895]
gi|157084599|gb|ABV14277.1| hypothetical protein CKO_03192 [Citrobacter koseri ATCC BAA-895]
Length = 229
Score = 172 bits (435), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 132/221 (59%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA +G R GH+ G + V+ AA GI LT++AFS NW RP E+S
Sbjct: 1 MDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIDALTLYAFSSENWNRPAQEVSA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L L SL ++N+++R+IG+ + + ++++E T NTGL L IA N
Sbjct: 61 LMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQDRIRKSEALTAQNTGLTLNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I + ++ + + ++ G + +D ++ + + ++ DL+IRTGGE R+S+F
Sbjct: 121 YGGRWDIVQGVRQLAEQVQEGLLRPDQIDEEMLNQKICMHELAPVDLVIRTGGEHRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
LLWQ+AY+E F WPDF + F AL+ + R+RRFGG
Sbjct: 181 LLWQIAYAELYFTDVLWPDFDEQDFEGALHAFANRERRFGG 221
>gi|14520788|ref|NP_126263.1| hypothetical protein PAB0394 [Pyrococcus abyssi GE5]
gi|13633995|sp|Q9V157|UPPS_PYRAB RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|5458004|emb|CAB49494.1| uppS probable undecaprenyl pyrophosphate synthetase (EC 2.5.1.31)
[Pyrococcus abyssi GE5]
Length = 264
Score = 172 bits (435), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 134/229 (58%), Gaps = 2/229 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGN RWA R P GH G + EI+ E+GI+ LT++AFS N++R
Sbjct: 35 PKHVAIIMDGNRRWAKKREKPPWYGHLFGSKKLEEILEWCHELGIRILTVYAFSTENFKR 94
Query: 71 PVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
E+ L++L + ++ + + ++V VIG + L + +EAE TR
Sbjct: 95 SKEEVERLMQLFEQKFRELVTDKRVHEYGVRVNVIGRKELLPKSVRDAAEEAERATRKYN 154
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
L +A Y R EI A+K+I +D+ G + D+D L+ KYL ++PDPD++IRT
Sbjct: 155 NYVLNVAIAYGGRSEIVDAVKDIVRDVMDGKLRVEDIDEELLKKYLYVPNMPDPDIVIRT 214
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
GGE R+S+FLL+Q+AYSE F+ Y+P+F + F + ++ R+RRFG
Sbjct: 215 GGEVRISNFLLYQIAYSELFFVDVYFPEFRKIDFLRIIREFQKRERRFG 263
>gi|297559707|ref|YP_003678681.1| undecaprenyl diphosphate synthase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296844155|gb|ADH66175.1| undecaprenyl diphosphate synthase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 273
Score = 172 bits (435), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 85/228 (37%), Positives = 129/228 (56%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ ++MDGNGRWA RGL R GH+ G +++ A E+G+ NL+ +AFS NW+R
Sbjct: 35 PRHVAVVMDGNGRWAKERGLARTEGHKAGESSLFDVIEGALEMGVANLSAYAFSTENWKR 94
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ L ++V+ G L ++ L++AE+ TR NT L
Sbjct: 95 SPDEVRFLMGFNRDTIRRRRDELHARGVRVKWAGRAGRLWKSVIRELQDAEEMTRDNTAL 154
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L NY + EI A + + + +G + + +A++L DVP DL +R+ G
Sbjct: 155 TLQFCVNYGGQAEIVDAARELARRAAAGLLSPEKITEDTLAQHLYAPDVPPVDLFVRSSG 214
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S+FLLWQ AY+EFVF+ WPDF R + A Y RDRR+GG
Sbjct: 215 EQRTSNFLLWQSAYAEFVFLDTLWPDFDRRDLWRACEIYASRDRRYGG 262
>gi|332674022|gb|AEE70839.1| di-trans,poly-cis-decaprenylcistransferase [Helicobacter pylori 83]
Length = 234
Score = 172 bits (435), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 135/227 (59%), Gaps = 1/227 (0%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPK 66
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
SE+ L+K++K +LK + NNI+ + IG+ ++ + + E TR
Sbjct: 67 SEVDFLMKMLKKYLKDERSTYLDNNIRFKAIGDLEGFSKELRDTILQLESDTRHFKDFTQ 126
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A NY S++EISRA K++ + S +++ I+ LDT ++P+ DL++RTGGE
Sbjct: 127 VLALNYGSKNEISRAFKSLLESPPSNINLLESLENE-ISNRLDTRNLPEVDLLLRTGGEM 185
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 186 RLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 232
>gi|284990197|ref|YP_003408751.1| undecaprenyl diphosphate synthase [Geodermatophilus obscurus DSM
43160]
gi|284063442|gb|ADB74380.1| undecaprenyl diphosphate synthase [Geodermatophilus obscurus DSM
43160]
Length = 250
Score = 172 bits (435), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 132/227 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I+MDGNGRWA RGLPR AGH G + V A E+G+ ++ +AFS NWRR
Sbjct: 22 PGHVAIVMDGNGRWAKQRGLPRTAGHEAGESSLFDCVEGAIELGVTAISAYAFSTENWRR 81
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ + + ++VR G R L ++ L+ AE+ T+ N L
Sbjct: 82 SPDEVRFLMGFNRDVIRRRRDEMHELGVRVRWAGRRPRLWRSVIKELEVAEELTKDNDVL 141
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R EI+ A I +++ +G + VD +A++LD D+PD DL +R+ G
Sbjct: 142 TLTMCVNYGGRAEIADAAAAIAREVAAGRLDPAKVDEGTVARFLDEPDMPDVDLFVRSSG 201
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R S+FLLWQ AY+EFVF+ WPDF R + A +Y R RRFG
Sbjct: 202 ENRTSNFLLWQSAYAEFVFLDTLWPDFDRRHLWAACEEYASRQRRFG 248
>gi|242045600|ref|XP_002460671.1| hypothetical protein SORBIDRAFT_02g032900 [Sorghum bicolor]
gi|241924048|gb|EER97192.1| hypothetical protein SORBIDRAFT_02g032900 [Sorghum bicolor]
Length = 318
Score = 172 bits (435), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 92/238 (38%), Positives = 129/238 (54%), Gaps = 7/238 (2%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ S P H+G+++DG+ RWA ARGL GH G V + GI+ LT+FA S
Sbjct: 75 AESLPRHVGLVIDGHARWARARGLSVSEGHAVGRRTVERTVRLSRAWGIRALTVFACSHE 134
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
N RP EI +KL K F++ + I++ +IG+ +L +EA + TR
Sbjct: 135 NMTRPKEEIDFFMKLYKGFIRDNVDEFCREGIRLHLIGDSPGRPASLLRAAREAHEATRG 194
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS-------DV 179
N+ + L +A YS R +I RA + + +++ + D+D +LIA L TS
Sbjct: 195 NSEMVLMLAIGYSGRRDILRACRELAAEVQRDLLRPEDIDEALIAGKLGTSVAAGGELSC 254
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDPDL+IRT GE RLS+FLLWQ A+SE F WPDF + + AL Y R RRFG
Sbjct: 255 PDPDLVIRTSGELRLSNFLLWQSAFSELFFSDVMWPDFGEDEYLRALRSYQTRRRRFG 312
>gi|295394791|ref|ZP_06805006.1| di-trans,poly-cis-decaprenylcistransferase [Brevibacterium
mcbrellneri ATCC 49030]
gi|294972387|gb|EFG48247.1| di-trans,poly-cis-decaprenylcistransferase [Brevibacterium
mcbrellneri ATCC 49030]
Length = 258
Score = 172 bits (435), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 128/232 (55%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ ++MDGNGRWA RGLPR GH+ G +++ A E+G+K L+ +AFS NW+R
Sbjct: 23 PTHVAVVMDGNGRWANERGLPRTEGHKAGEASLLDVIYGAMEIGVKYLSAYAFSTENWKR 82
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ L +++ G R L ++ L++A++ T+ NT L
Sbjct: 83 SPEEVRFLMGFNRDVIRRRKEELHAAGVRIVWAGRRGRLWRSVIKELEDAQELTKNNTAL 142
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L NY R E+ A+ +D +G + + + L D+PD DL +R+ G
Sbjct: 143 TLQFCVNYGGRAELVDAMNAAVEDAVAGRIKPGKLTERSLHSRLYNPDIPDVDLFLRSSG 202
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R S+FLLWQ AY+E VF WPD R + A+ +Y RDRRFGG K
Sbjct: 203 EQRTSNFLLWQSAYAEMVFQNVLWPDVDRRTLWDAILEYAQRDRRFGGAVDK 254
>gi|8843798|dbj|BAA97346.1| undecaprenyl pyrophosphate synthetase-like [Arabidopsis thaliana]
Length = 225
Score = 171 bits (434), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 89/222 (40%), Positives = 127/222 (57%), Gaps = 2/222 (0%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGN RWA GL GH G + E ++GI ++ FAFS NW R E+
Sbjct: 1 MDGNRRWAKRAGLLTSQGHEAGAKRLIEFSELCFKLGIHTVSAFAFSTENWGRHKIEVKC 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ LI+ +LK ++ +V VIGN + + +L ++E E+ TR +L +A +
Sbjct: 61 LMSLIQHYLKSKIQYFQREETRVSVIGNLTKIPESLLRTVQEIEEATRSYKKKHLILAID 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT--SDVPDPDLIIRTGGEKRLS 195
YS R +I RA K+I + E G + DVD +LI + L T ++ P PDL+IRT GE+R+S
Sbjct: 121 YSGRLDILRACKSIVKKSEKGLIREEDVDEALIERELLTNCTEFPSPDLLIRTSGEQRIS 180
Query: 196 DFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+F LWQ+AY+E F P WPDF ++ AL Y R+RRFG
Sbjct: 181 NFFLWQLAYTELFFSPVLWPDFDKDKLLEALVSYQRRERRFG 222
>gi|159483069|ref|XP_001699585.1| hypothetical protein CHLREDRAFT_121674 [Chlamydomonas reinhardtii]
gi|158272690|gb|EDO98487.1| predicted protein [Chlamydomonas reinhardtii]
Length = 227
Score = 171 bits (434), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 84/227 (37%), Positives = 126/227 (55%), Gaps = 2/227 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +MDGN RW + G GH +G+ +V E G+K LT++AFS NW R
Sbjct: 2 PAHVAAVMDGNHRWGTSHGGDWRRGHEEGVNALRRVVQFCREDGVKALTVYAFSCENWGR 61
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
SE+ L+ L++ L L+K+ +++ G+R +L + + ++ AE T TGL
Sbjct: 62 SASEVGFLMGLLERTLDAVLPDLQKHGVRLTFAGDRAALPESLQRAMQRAEAATGSCTGL 121
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y +R +I+RA + + + + GS+ V + T V DPDL+IRT G
Sbjct: 122 VLCVALSYGARQDITRAAQELCRRVAEGSLAPEQVGGAAWGGV--TGQVGDPDLLIRTSG 179
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+RLS+FLLW+ AY+E F WPDF R + A+ Y R RRFG
Sbjct: 180 EQRLSNFLLWECAYTELYFTDACWPDFDRPHWDAAMQHYATRTRRFG 226
>gi|210135380|ref|YP_002301819.1| undecaprenyl pyrophosphate synthase [Helicobacter pylori P12]
gi|210133348|gb|ACJ08339.1| undecaprenyl pyrophosphate synthase [Helicobacter pylori P12]
Length = 234
Score = 171 bits (434), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 85/227 (37%), Positives = 136/227 (59%), Gaps = 1/227 (0%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPK 66
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
SE+ L+K++K +LK + N+I+ + IG+ ++ + + E+ TR
Sbjct: 67 SEVDFLMKMLKKYLKDERSTYLDNHIRFKAIGDLEGFSKELRETILQLENDTRHFKDFTQ 126
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A NY S++EISRA K++ + S +++ I+ LDT ++P+ DL++RTGGE
Sbjct: 127 VLALNYGSKNEISRAFKSLLESPPSNISLLESLENE-ISNRLDTHNLPEVDLLLRTGGEM 185
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 186 RLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 232
>gi|298735760|ref|YP_003728285.1| undecaprenyl pyrophosphate synthetase [Helicobacter pylori B8]
gi|298354949|emb|CBI65821.1| undecaprenyl pyrophosphate synthetase [Helicobacter pylori B8]
Length = 234
Score = 171 bits (434), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 85/227 (37%), Positives = 135/227 (59%), Gaps = 1/227 (0%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA + R GH+KG++ +I ++ LT++AFS NW+RP
Sbjct: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCTNHKLECLTLYAFSTENWKRPK 66
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
SE+ L+K++K +LK + NNI+ R IG+ ++ + + E TR
Sbjct: 67 SEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLESDTRHFKDFTQ 126
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A NY S++E+SRA K++ ++ + +++ I+ LDT D+P+ DL++RTGGE
Sbjct: 127 VLALNYGSKNELSRAFKSLLENPPNNIDPLESLENE-ISNRLDTRDLPEVDLLLRTGGEM 185
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 186 RLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 232
>gi|46199853|ref|YP_005520.1| undecaprenyl pyrophosphate synthetase [Thermus thermophilus HB27]
gi|42559907|sp|O87197|UPPS_THET2 RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|3724366|dbj|BAA33784.1| unknown ORF [Thermus thermophilus]
gi|46197480|gb|AAS81893.1| probable undecaprenyl pyrophosphate synthetase [Thermus
thermophilus HB27]
Length = 263
Score = 171 bits (434), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 91/236 (38%), Positives = 138/236 (58%), Gaps = 12/236 (5%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+G+I+DGN R+A A GL GH G++ E++ E+GIK +T++ FS +N++R
Sbjct: 30 PRHLGLILDGNRRYARALGLSPTKGHEFGVQKAYEVLEWCLEMGIKTVTVWVFSTDNFKR 89
Query: 71 PVSEISELVKLIKSFLKKGF-----YSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
P E+ L+ L FL++ + + ++ ++VR IG R +++ ++ E +T
Sbjct: 90 PPEEVETLMNL---FLREAERMAEDHRILEHQVRVRFIGRREGFSPEVVRAIERLERRTE 146
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDVPD 181
+ G+ L IA Y R+EI A+K + + E+ + +V L IA++L T+ +PD
Sbjct: 147 GHRGMFLNIALGYGGREEIVDAVKRLLLEAEARGLSPKEVAEGLTPEDIARHLYTAGLPD 206
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PD IIRT GE RLS FLLWQ AYSEF F WP+F + F AL Y R+RRFG
Sbjct: 207 PDFIIRTSGEIRLSGFLLWQSAYSEFYFADVLWPEFRKIDFLRALRSYQARERRFG 262
>gi|55981884|ref|YP_145181.1| undecaprenyl pyrophosphate synthase [Thermus thermophilus HB8]
gi|73920283|sp|Q5SH15|UPPS_THET8 RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|55773297|dbj|BAD71738.1| probable undecaprenyl pyrophosphate synthetase [Thermus
thermophilus HB8]
Length = 263
Score = 171 bits (434), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 91/236 (38%), Positives = 138/236 (58%), Gaps = 12/236 (5%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+G+I+DGN R+A A GL GH G++ E++ E+GIK +T++ FS +N++R
Sbjct: 30 PRHLGLILDGNRRYARALGLSPTKGHEFGVQKAYEVLEWCLEMGIKTVTVWVFSTDNFKR 89
Query: 71 PVSEISELVKLIKSFLKKGF-----YSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
P E+ L+ L FL++ + + ++ ++VR IG R +++ ++ E +T
Sbjct: 90 PPEEVETLMNL---FLREAERMAEDHRILEHQVRVRFIGRREGFSPEVVRAIERLERRTE 146
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDVPD 181
+ G+ L IA Y R+EI A+K + + E+ + +V L IA++L T+ +PD
Sbjct: 147 GHRGMFLNIAMGYGGREEIVDAVKRLLLEAEARGLSPKEVAEGLTPEDIARHLYTAGLPD 206
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PD IIRT GE RLS FLLWQ AYSEF F WP+F + F AL Y R+RRFG
Sbjct: 207 PDFIIRTSGEIRLSGFLLWQSAYSEFYFADVLWPEFRKIDFLRALRSYQARERRFG 262
>gi|33519741|ref|NP_878573.1| undecaprenyl pyrophosphate synthetase [Candidatus Blochmannia
floridanus]
gi|42559771|sp|Q7VRE1|UPPS_BLOFL RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|33504086|emb|CAD83347.1| undecaprenyl pyrophosphate synthetase [Candidatus Blochmannia
floridanus]
Length = 250
Score = 171 bits (433), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 96/236 (40%), Positives = 138/236 (58%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + S+ P HI IIMDGNGRWA RG R GH+ G + V A LT++
Sbjct: 10 IQPLSSAILPRHIAIIMDGNGRWARGRGKLRIVGHQAGFQAARRAVRFAVHCRFNALTLY 69
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW R +EIS L++L L +L KNNIK+R+IG+ ++ + +E
Sbjct: 70 AFSSENWTRSNTEISSLMQLFIYALNSEINNLNKNNIKLRIIGDVNRFTQELQDCIYRSE 129
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T N GLNL IA NY R +I + +K I I+ G + + ++ +++ KY+ +++
Sbjct: 130 QLTSNNNGLNLNIAANYGGRWDIVQGVKKIIAQIQKGVLKPNQINENILCKYVCMNELSP 189
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRTGGE R+S+FLLWQ+AY+E F WPDF+ +F AL+ + RDRRFG
Sbjct: 190 VDLVIRTGGEHRISNFLLWQIAYAELFFTDVLWPDFNDIVFRRALHSFMKRDRRFG 245
>gi|86160003|ref|YP_466788.1| undecaprenyl pyrophosphate synthetase [Anaeromyxobacter
dehalogenans 2CP-C]
gi|85776514|gb|ABC83351.1| Undecaprenyl pyrophosphate synthetase [Anaeromyxobacter
dehalogenans 2CP-C]
Length = 251
Score = 171 bits (433), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 87/227 (38%), Positives = 126/227 (55%), Gaps = 6/227 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RGLPR AGHR+G E + AA VG++ LT++AFS NW R
Sbjct: 19 PRHVAIIMDGNGRWAENRGLPRVAGHREGSEAVRAVTRAARRVGLEALTLYAFSSENWAR 78
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L+ +L+ + +N I++ IG L D + L A +T N +
Sbjct: 79 PDEEVGALMQLLADYLESERAEMMQNGIRLNAIGELDRLPDFVRERLDAARAETAANDRM 138
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y R E+ + + + +D+ + L T +P+ DL++RT G
Sbjct: 139 VLTLALSYGGRQEL------VHAARAAAAARGTALDAEDLEAALWTRGLPELDLLVRTSG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+R+S+FLLWQ AY+E F WPDF F A+ + R RRFG
Sbjct: 193 ERRISNFLLWQCAYAELYFSEVLWPDFRDAALFEAIADFQRRQRRFG 239
>gi|259507799|ref|ZP_05750699.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
efficiens YS-314]
gi|259164592|gb|EEW49146.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
efficiens YS-314]
Length = 222
Score = 171 bits (433), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 127/220 (57%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA +G+ R GHR+G V ++V A +G+ L+ +AFS NWRR E+
Sbjct: 1 MDGNGRWATEKGMKRTEGHRRGEAVLLDVVDACLALGVPYLSAYAFSTENWRRSTEEVRF 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ + L++ L + ++VR +G R L ++ L+ AE+ T+ NT + L + N
Sbjct: 61 LMGFNRDVLRRQRDGLHEKGVRVRWVGRRPRLWRSVIRELEAAEELTKDNTNMTLAMCVN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R EI A + I + +G + ++ +LD D+PD DL +R GEKR S+F
Sbjct: 121 YGGRAEIIDAAREIARQAAAGQLRPEQINEKTFPDFLDEPDMPDVDLFLRPSGEKRTSNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
LLWQ AY+E V+ + +PDF+ + F A+ +Y RDRRFG
Sbjct: 181 LLWQSAYAEMVYQDKLFPDFTPQDLFDAVEEYARRDRRFG 220
>gi|315587111|gb|ADU41492.1| Di-trans,poly-cis-decaprenylcistransferase [Helicobacter pylori
35A]
Length = 234
Score = 171 bits (433), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 85/227 (37%), Positives = 136/227 (59%), Gaps = 1/227 (0%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLEYLTLYAFSTENWKRPK 66
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
SE+ L+K++K +LK + N+I+ R IG+ ++ + + E+ T
Sbjct: 67 SEVDFLMKMLKKYLKDERSTYLDNHIRFRAIGDLEGFSKELRDTILQLENDTGHFKDFTQ 126
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A NY S++EISRA K++ + S +++ I+ +LDT ++P+ DL++RTGGE
Sbjct: 127 VLALNYGSKNEISRAFKSLLESPPSNISLLESLENE-ISNHLDTRNLPEVDLLLRTGGEM 185
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 186 RLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 232
>gi|162447993|ref|YP_001621125.1| undecaprenyl pyrophosphate synthetase [Acholeplasma laidlawii
PG-8A]
gi|161986100|gb|ABX81749.1| undecaprenyl pyrophosphate synthetase [Acholeplasma laidlawii
PG-8A]
Length = 222
Score = 171 bits (433), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 95/236 (40%), Positives = 137/236 (58%), Gaps = 15/236 (6%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M + P H+ II+DGNGRWA LPR AGH +G +I A + GI+ LT++AFS
Sbjct: 1 MKIQNLPKHVAIILDGNGRWAKRLHLPRSAGHYQGGLNLAKIAEHANKRGIEELTVYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+ L+ + K + + NI++R G + L DIL ++ ED+T
Sbjct: 61 TENWKRPQDEVEYLMTKPIEVVGKNKARICQANIRIRFKGRKDRLSKDILELMDSLEDET 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP-D 183
+ TG+ + + +Y S DE+ AIK + D+ +D + + ++L V P D
Sbjct: 121 KDFTGMTINVCIDYGSYDELITAIKQM--DV---------IDEAHLEQHL---MVNRPVD 166
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
L+IRTGGE+RLS+FLLWQ+AY+E F YWP F + F AL +Y+ R RRFGGL
Sbjct: 167 LLIRTGGEQRLSNFLLWQIAYAELYFTKRYWPAFKIKHFDRALKEYSKRQRRFGGL 222
>gi|321222195|gb|EFX47267.1| Undecaprenyl pyrophosphate synthetase [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|322616045|gb|EFY12962.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322620828|gb|EFY17688.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322623821|gb|EFY20658.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322627269|gb|EFY24060.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322630576|gb|EFY27340.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322638206|gb|EFY34907.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322645525|gb|EFY42052.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322648181|gb|EFY44648.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322657132|gb|EFY53415.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322657502|gb|EFY53774.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322663822|gb|EFY60022.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322666655|gb|EFY62833.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322676502|gb|EFY72573.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322679406|gb|EFY75451.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322686267|gb|EFY82251.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323193447|gb|EFZ78655.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323197531|gb|EFZ82666.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323201200|gb|EFZ86269.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323209595|gb|EFZ94528.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323212153|gb|EFZ96977.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323216458|gb|EGA01184.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323225913|gb|EGA10133.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323228546|gb|EGA12675.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323236841|gb|EGA20917.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323239659|gb|EGA23706.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323242294|gb|EGA26323.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323249956|gb|EGA33852.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323252386|gb|EGA36237.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323255669|gb|EGA39422.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323262894|gb|EGA46444.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323265380|gb|EGA48876.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323271833|gb|EGA55251.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
Length = 229
Score = 171 bits (433), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 132/221 (59%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA +G R GH+ G + V+ AA GI LT++AFS NW RP E+S
Sbjct: 1 MDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIDALTLYAFSSENWNRPAQEVSA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L L SL ++N+++R+IG+ + + ++++E T NTGL L IA N
Sbjct: 61 LMELFVWALDSEVKSLHRHNVRLRIIGDISRFNSRLQERIRKSEALTAHNTGLTLNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I + ++ + + +++G + +D + + + ++ DL+IRTGGE R+S+F
Sbjct: 121 YGGRWDIVQGVRQLAEQVQAGVLRPDQIDEERLGQQICMHELAPVDLVIRTGGEHRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
LLWQ+AY+E F WPDF + F AL+ + R+RRFGG
Sbjct: 181 LLWQIAYAELYFTDVLWPDFDEQDFEGALHAFANRERRFGG 221
>gi|161504660|ref|YP_001571772.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160866007|gb|ABX22630.1| hypothetical protein SARI_02781 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 229
Score = 171 bits (433), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 132/221 (59%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA +G R GH+ G + V+ AA GI LT++AFS NW RP E+S
Sbjct: 1 MDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIDALTLYAFSSENWNRPAQEVSA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L L SL ++N+++R+IG+ + + ++++E T NTGL L IA N
Sbjct: 61 LMELFVWALDSEVKSLHRHNVRLRIIGDISRFNSRLQERIRKSEALTARNTGLTLNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I + ++ + + +++G + +D + + + ++ DL+IRTGGE R+S+F
Sbjct: 121 YGGRWDIVQGVRQLAEQVQAGVLRPDQIDEERLGQQICMHELAPVDLVIRTGGEHRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
LLWQ+AY+E F WPDF + F AL+ + R+RRFGG
Sbjct: 181 LLWQIAYAELYFTDVLWPDFDEQDFEGALHAFANRERRFGG 221
>gi|262370223|ref|ZP_06063549.1| undecaprenyl pyrophosphate synthetase [Acinetobacter johnsonii
SH046]
gi|262314565|gb|EEY95606.1| undecaprenyl pyrophosphate synthetase [Acinetobacter johnsonii
SH046]
Length = 250
Score = 171 bits (432), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 134/232 (57%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGN R+A + + GHR+G V + IV + I+ LT+FAFS NW+R
Sbjct: 11 PKHVAIIMDGNNRFAKKNAMQKGDGHREGKNVLDPIVEHCRKKNIQALTVFAFSSENWKR 70
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L+KL++ + + + + + +R IG+R L + ++ AE T +
Sbjct: 71 PQAEVDLLMKLLEDTIHEQLPRMHQYQMSLRFIGDRSKLSPQLRDLMLHAEQDTANFDKM 130
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA +Y +++ A K I ++S ++ +D + Y+ SD+P DL+IRTGG
Sbjct: 131 TLTIAISYGGMWDMANAAKQIALAVQSQALDPEQIDEHVFGHYVSLSDLPAVDLLIRTGG 190
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+ RLS+F+LWQ AY+E F P WP+FS E F AL + R+RRFG +++
Sbjct: 191 DFRLSNFMLWQAAYAELYFTPTLWPEFSVEEFDDALAVFGGRERRFGKTTEQ 242
>gi|111114942|ref|YP_709560.1| undecaprenyl diphosphate synthase [Borrelia afzelii PKo]
gi|216264096|ref|ZP_03436090.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia afzelii ACA-1]
gi|110890216|gb|ABH01384.1| undecaprenyl diphosphate synthase [Borrelia afzelii PKo]
gi|215980140|gb|EEC20962.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia afzelii ACA-1]
Length = 230
Score = 171 bits (432), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 138/233 (59%), Gaps = 4/233 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M SS P H+GIIMDGN RWA +GL G+++G++ EIV + ++GIK L+ + FS
Sbjct: 1 MNKSSLPSHVGIIMDGNRRWALGKGLSFSEGYKEGLKRAKEIVKHSLKIGIKYLSFYVFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+R EI EL+ LI S+L+ F KKN IK+ V G+ SL +++ +K++ +
Sbjct: 61 TENWKRDDCEIEELMFLIASYLRAEFNFYKKNGIKIIVSGDVDSLGEEVKSSIKDSVSFS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ L L +A NY R+EI RA++ S + +D + + +LD ++PD DL
Sbjct: 121 KNFNNLVLNLAINYGGRNEILRAVRKFV----SNNFDLKSLDENTFSNFLDNPELPDLDL 176
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+IRTGG R+S+F LW++AYSE +F WP++ + L + LR R FG
Sbjct: 177 LIRTGGNIRISNFFLWRIAYSELIFSNVLWPEYYENRYSKDLECFQLRRRNFG 229
>gi|224534893|ref|ZP_03675462.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia spielmanii
A14S]
gi|224513833|gb|EEF84158.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia spielmanii
A14S]
Length = 230
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/236 (38%), Positives = 142/236 (60%), Gaps = 10/236 (4%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M SS P H+GIIMDGN RWA +G+ G+++G++ EIV + ++GIK L+ + FS
Sbjct: 1 MNKSSLPSHVGIIMDGNRRWALGKGVSFSEGYKEGLKRAKEIVIHSLKLGIKYLSFYVFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+R EI EL+ LI S+L+ F KKN IK+ V G+ SL +++ +K++ D +
Sbjct: 61 TENWKRDDCEIKELMFLIASYLRAEFNFYKKNGIKIIVSGDVDSLSEEVKSSIKDSVDFS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQ---DIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ + L L +A NY R+EI RA++ D++S +D S + +LD ++PD
Sbjct: 121 KNFSNLVLNLAINYGGRNEILRAVRKFVSSDFDLDS-------LDESTFSNFLDNPELPD 173
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRTGG R+S+F LW++AYSE +F WP++ + L+ + R R FG
Sbjct: 174 LDLLIRTGGNIRISNFFLWRIAYSELIFSNVLWPEYYGNRYSKDLDCFQFRRRNFG 229
>gi|256396145|ref|YP_003117709.1| undecaprenyl diphosphate synthase [Catenulispora acidiphila DSM
44928]
gi|256362371|gb|ACU75868.1| undecaprenyl diphosphate synthase [Catenulispora acidiphila DSM
44928]
Length = 299
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/229 (36%), Positives = 135/229 (58%), Gaps = 1/229 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVG-IKNLTIFAFSINNWR 69
P H+ ++MDGNGRWA RGL R GH+ G ++V A ++G I +++ +AFS NW+
Sbjct: 41 PRHVALVMDGNGRWAKERGLSRIEGHKVGEASLFDVVEGAVQLGGITHISAYAFSTENWK 100
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ L+ + +++ + + +++R G R L ++ L+ AE++T+ N
Sbjct: 101 RSPEEVRFLMGFNRDTIRRRIGEMDELGVRIRWAGRRPRLWKSVIDELEWAEERTKDNKL 160
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L + NY R EI+ A+ ++ +DI++G + ++ + +YL D+PD DL IR+
Sbjct: 161 LTLTMCVNYGGRWEIADAMADMGRDIKAGRLDPSKINEKTVTRYLYEPDMPDVDLFIRSS 220
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GE R S+FL+W+ AY+EFVF WPDF R + A + RDRR+GG
Sbjct: 221 GEHRTSNFLMWESAYAEFVFDNTLWPDFDRTNLWRACESFAGRDRRYGG 269
>gi|317177963|dbj|BAJ55752.1| putative undecaprenyl pyrophosphate synthase [Helicobacter pylori
F16]
Length = 234
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/227 (37%), Positives = 136/227 (59%), Gaps = 1/227 (0%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPK 66
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
SE+ L+K++K +LK + N+I+ + IG+ ++ + + E+ TR
Sbjct: 67 SEVDFLMKMLKKYLKDERSTYLDNHIRFKAIGDLEGFSKELRDTILKLENDTRHFKDFTQ 126
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A NY S++EISRA K++ + S +++ I+ LDT ++P+ DL++RTGGE
Sbjct: 127 VLALNYGSKNEISRAFKSLLESPPSNISLLESLENE-ISNRLDTRNLPEVDLLLRTGGEM 185
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 186 RLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 232
>gi|315425668|dbj|BAJ47326.1| undecaprenyl pyrophosphate synthetase [Candidatus Caldiarchaeum
subterraneum]
gi|315427570|dbj|BAJ49169.1| undecaprenyl pyrophosphate synthetase [Candidatus Caldiarchaeum
subterraneum]
Length = 260
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/244 (38%), Positives = 140/244 (57%), Gaps = 10/244 (4%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ S P H+G+I+DGN RWA RG P GH G + EI+ E+GIK +T+
Sbjct: 19 LLRNVSSGQMPSHVGLILDGNRRWARVRGWPPWKGHAAGADRVEEILDWLLELGIKTVTL 78
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLK-----KNNIKVRVIGNRLSLDDDILC 115
+ S N RRP+ E+ E+ +LI+ +K + L+ K+ +KV+VIG + L +++
Sbjct: 79 YILSTENLRRPMHEVEEIFRLIE---EKAYSLLRDPKIYKHRVKVKVIGRKDMLPPNVVE 135
Query: 116 VLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD 175
L++ E T + L +A Y R EI A++ I + +++G + +D K+L
Sbjct: 136 ALEKLEHATERHDNRFLNLAIAYGGRLEILEAVRQIAEQVKTGQLSPEQIDEKTFEKHLY 195
Query: 176 TSDV--PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
T+ V P+PDLIIRT GE R+S+FLLWQ AYSEFVF PDF A+ Y R+
Sbjct: 196 TNGVPNPEPDLIIRTSGETRISNFLLWQSAYSEFVFQDVNLPDFRYIDLLRAIRTYQSRE 255
Query: 234 RRFG 237
RRFG
Sbjct: 256 RRFG 259
>gi|317180946|dbj|BAJ58732.1| putative undecaprenyl pyrophosphate synthase [Helicobacter pylori
F32]
Length = 234
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/227 (37%), Positives = 135/227 (59%), Gaps = 1/227 (0%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPK 66
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
SE+ L+K++K +LK + N+I+ + IG+ ++ + + E+ T+
Sbjct: 67 SEVDFLMKMLKKYLKDERSTYLDNHIRFKAIGDLEGFSKELRDTILQLENDTKHFKDFTQ 126
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A NY S++E+SRA K++ + S ++ I+ LDT D+P+ DL++RTGGE
Sbjct: 127 VLALNYGSKNELSRAFKSLLESPPSNISLLESLEDE-ISNRLDTRDLPEVDLLLRTGGEM 185
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 186 RLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 232
>gi|325971043|ref|YP_004247234.1| undecaprenyl pyrophosphate synthase [Spirochaeta sp. Buddy]
gi|324026281|gb|ADY13040.1| Undecaprenyl pyrophosphate synthase [Spirochaeta sp. Buddy]
Length = 232
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 130/237 (54%), Gaps = 7/237 (2%)
Query: 6 MSSSP--PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
M P P H+GIIMDGNGRWA R LPR AGH +G++ ++ AA GI +T + F
Sbjct: 1 MEDKPVAPVHLGIIMDGNGRWAKKRSLPRTAGHAEGLKALKRVICEAAAQGIGYVTFYTF 60
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E++ L+ L + + K+ I++ G+ L D+ +++ +
Sbjct: 61 STENWKRSEQEVAYLMHLFVAKIHGELSFYNKHGIRILARGDLQKLPMDVQQAIEKTVFE 120
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
TR NT + +A NY RDEI RA+ + G D+ + IA LD VP D
Sbjct: 121 TRNNTTITAIVAINYGGRDEICRAVNKCIA-LNPG----QDITEASIADNLDLPQVPPVD 175
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
+I+R+ EKRLS+FLLW AY+E F +YWPD++ E + Y+ R R+FGG+
Sbjct: 176 MIVRSANEKRLSNFLLWDSAYAELAFYEKYWPDWNEEDVRIVCHDYSQRVRKFGGIE 232
>gi|311113055|ref|YP_003984277.1| undecaprenyl diphosphate synthase [Rothia dentocariosa ATCC 17931]
gi|310944549|gb|ADP40843.1| undecaprenyl diphosphate synthase [Rothia dentocariosa ATCC 17931]
Length = 272
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 91/241 (37%), Positives = 134/241 (55%), Gaps = 7/241 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M S+ P HIG+++DGN RWAA RGL GH G E + + A++GI +T+
Sbjct: 34 MATSLTPQMLPTHIGVLVDGNRRWAAQRGLSTREGHAAGAERIIDFLGWCADLGIPQVTL 93
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S N +RP E++ L+ +I FL++ ++ ++ V +GN + ++ L+
Sbjct: 94 YMLSTENLKRPADELTGLIAVIDEFLQR-LHTAQQG--PVHAVGNVSLIPHELRNTLERV 150
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDT 176
++T G+ + IA Y R EI A++ + D E+ D+ +L I++ L T
Sbjct: 151 IEETAPLPGVRVNIAVGYGGRQEIVDAVRELILDAEAQGRSMRDLADTLNVEDISRRLYT 210
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
D+PDPDL+IRT GE+RLS FL WQ AYSEF F WPDF+R F AL Y R RRF
Sbjct: 211 RDMPDPDLLIRTSGEQRLSGFLTWQSAYSEFYFCQALWPDFTRVDFLRALRDYAGRTRRF 270
Query: 237 G 237
G
Sbjct: 271 G 271
>gi|27904718|ref|NP_777844.1| undecaprenyl pyrophosphate synthetase [Buchnera aphidicola str. Bp
(Baizongia pistaciae)]
gi|42559807|sp|Q89AP0|UPPS_BUCBP RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|27904115|gb|AAO26949.1| undecaprenyl pyrophosphate synthetase [Buchnera aphidicola str. Bp
(Baizongia pistaciae)]
Length = 251
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/230 (40%), Positives = 137/230 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNG+WA RG R GH G ++ A +K LT++AFS +NW R
Sbjct: 21 PSHVAIIMDGNGKWARKRGKSRFFGHFSGFYAARRAISFALFHKLKILTLYAFSSDNWNR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
EI L++L L +L K NI+++VIGN+ + + ++ E +T NTGL
Sbjct: 81 SPREIKVLMELFFYALSNETNNLNKYNIRLKVIGNKEKFNTVLKNKIRVVEKETLKNTGL 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NYS R EI AIK I I+ ++ + + S ++ +L ++ DL+IRTGG
Sbjct: 141 LLNIAANYSGRWEILEAIKKIVVAIKCKNLSLNAITESTVSDFLLINEKIPVDLVIRTGG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E RLS+FL+WQ++YSE F WPDF R+ F A+++++ R+RRFG +S
Sbjct: 201 ECRLSNFLVWQISYSELYFTNTLWPDFDRKEFKKAIDEFSNRERRFGRVS 250
>gi|308062500|gb|ADO04388.1| undecaprenyl pyrophosphate synthase [Helicobacter pylori Cuz20]
Length = 234
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/227 (37%), Positives = 135/227 (59%), Gaps = 1/227 (0%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHRLECLTLYAFSTENWKRPK 66
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
SE+ L+K++K +LK + NNI+ + IG+ ++ + + E+ T
Sbjct: 67 SEVDFLMKMLKKYLKDERSTYLDNNIRFKAIGDLEGFSKELRETILQLENDTGHFKDFTQ 126
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A NY S++E+SRA K++ + S +++ I+ LDT D+P+ DL++RTGGE
Sbjct: 127 VLALNYGSKNELSRAFKSLLESPPSNISLLESLENE-ISNRLDTRDLPEVDLLLRTGGEM 185
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 186 RLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 232
>gi|332530831|ref|ZP_08406757.1| undecaprenyl diphosphate synthase [Hylemonella gracilis ATCC 19624]
gi|332039743|gb|EGI76143.1| undecaprenyl diphosphate synthase [Hylemonella gracilis ATCC 19624]
Length = 261
Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/227 (40%), Positives = 125/227 (55%), Gaps = 7/227 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI I+MDGNGRWA R LPR AGHR+G+E + A E G+ LT+FAFS NW R
Sbjct: 21 PTHIAIVMDGNGRWATRRLLPRLAGHRQGMESLRRCIRACLERGVAVLTVFAFSSENWNR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L+ L K + + +++ +G R +L + + L AE T N L
Sbjct: 81 PAEEVSGLMELLAGALAKEVPQMHADGVRLHFVGERANLSEKVRTGLTTAEQATAGNDRL 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + FNY R ++ Q + +V + +A L + V DPDL+IRTGG
Sbjct: 141 ILNVCFNYGGR-------WDLVQAAAKLAAAKVEVTEATLASALALAHVADPDLLIRTGG 193
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E RLS+FLLWQ AY+E F WPDF A+ Y R+RR+G
Sbjct: 194 ELRLSNFLLWQAAYAELYFSEMLWPDFDEAELDRAIAAYAKRERRYG 240
>gi|295098989|emb|CBK88078.1| Undecaprenyl pyrophosphate synthetase [Eubacterium cylindroides
T2-87]
Length = 217
Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/214 (41%), Positives = 125/214 (58%), Gaps = 4/214 (1%)
Query: 28 RGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLK 87
RGLPR AGH++G + + AA E+G+K L ++AFS NW+RP E+ L KL F
Sbjct: 8 RGLPRTAGHKQGADTIRTVALAANELGVKKLILYAFSTENWKRPEDEVGYLCKLPGLFFN 67
Query: 88 KGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRA 147
K L + NI+V G D V+ A + T NTGL L +A NY SR EI
Sbjct: 68 KYIRELMEKNIRVTFAGELERFPSDTQKVINRAVNDTSHNTGLELCLAINYGSRREILLG 127
Query: 148 IKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEF 207
I+ ++++G +D+ ++YL + D DL+IRT GE R+S+FLLWQ+AYSE
Sbjct: 128 IQKYADEVKNGR--KNDLTEEDFSQYLFVPE--DIDLMIRTSGEVRISNFLLWQLAYSEL 183
Query: 208 VFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
+F P WPDF++E + ++ RDRRFGGL+K
Sbjct: 184 IFTPVAWPDFNKEELVKCIEEFKHRDRRFGGLTK 217
>gi|18977971|ref|NP_579328.1| undecaprenyl diphosphate synthase [Pyrococcus furiosus DSM 3638]
gi|42559842|sp|Q8U0I8|UPPS_PYRFU RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|18893747|gb|AAL81723.1| undecaprenyl diphosphate synthase [Pyrococcus furiosus DSM 3638]
Length = 264
Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 90/239 (37%), Positives = 138/239 (57%), Gaps = 2/239 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + + P H+ IIMDGN RWA R P GH G + EIV E+GI+ LT+
Sbjct: 25 LLEKVKAGVIPKHVAIIMDGNRRWARKREKPPWYGHFFGSKKLEEIVEWCHELGIRILTV 84
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFS N++R E+ L+KL + ++ + + I+V V+G + L ++ +
Sbjct: 85 YAFSTENFKRSKEEVDRLMKLFEEKFRELVTDRRVHEYGIRVNVMGRKELLPKNVREAAE 144
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
EAE TR L IA Y R EI AIK+I D+ G + D++ ++ KYL +
Sbjct: 145 EAERVTRKYNNYFLNIALAYGGRSEIVDAIKDIVNDVLEGRLKLEDINEEIVRKYLYVPN 204
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+PDPD++IRTGGE R+S+FLL+Q+AYSE F+ Y+P+F + F + ++ R+RRFG
Sbjct: 205 MPDPDIVIRTGGEVRISNFLLYQIAYSELFFVDVYFPEFRKIDFLRIIREFQKRERRFG 263
>gi|238787230|ref|ZP_04631029.1| Di-trans,poly-cis-decaprenylcistransferase [Yersinia frederiksenii
ATCC 33641]
gi|238724492|gb|EEQ16133.1| Di-trans,poly-cis-decaprenylcistransferase [Yersinia frederiksenii
ATCC 33641]
Length = 230
Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/223 (38%), Positives = 131/223 (58%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA RG R GH+ G++ V+ AA + LT++AFS NW RP E+S
Sbjct: 1 MDGNGRWAKNRGKLRVFGHKAGVKSVRRAVSFAASHQLDALTLYAFSSENWNRPAQEVSA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L L SL K+N+++ VIG+ + + ++ +E+ T N GL L IA N
Sbjct: 61 LMELFVRALDSEVKSLHKHNVRLSVIGDISRFSERLQQRIRRSEELTADNDGLKLNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I + ++++ + ++ G + D+ + ++ + + DL+IRTGGE R+S+F
Sbjct: 121 YGGRWDIIQGMRHLAEQVQLGELQPADISEESLNSHICLHEQSEVDLVIRTGGEHRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LLWQ+AY+E F WPDF +F ALN + R+RRFGG +
Sbjct: 181 LLWQIAYAELYFTDVLWPDFDEHVFEGALNAFAQRERRFGGTT 223
>gi|294624554|ref|ZP_06703231.1| undecaprenyl pyrophosphate synthetase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292601160|gb|EFF45220.1| undecaprenyl pyrophosphate synthetase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 253
Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 132/232 (56%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R PR GHR G N + + + LT+FAFS NW R
Sbjct: 11 PRHIAIIMDGNGRWAQRRRRPRVIGHRAGARAVNRTIDFCLKKRVSALTLFAFSSENWGR 70
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL L + L++ ++VR IG+R + + AE T N+ L
Sbjct: 71 PQDEVDALMKLFLHALDREVEELQRRGVQVRFIGDRSRFAAPLRDRMAGAERSTAANSRL 130
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA +Y R +I+ A + + +D+ +G + +D +L++ + +D+P PDL IRTGG
Sbjct: 131 VLSIAASYGGRQDIAAAARALAEDVAAGRLQPEQIDEALLSSRVALADLPAPDLFIRTGG 190
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+ R+S+FLLWQ+AY+E F WP+F + AL+ Y R+RRFG S +
Sbjct: 191 DTRISNFLLWQLAYTELWFTETLWPEFDAGVLQQALDDYAGRERRFGLTSAQ 242
>gi|255994879|ref|ZP_05428014.1| di-trans,poly-cis-decaprenylcistransferase [Eubacterium saphenum
ATCC 49989]
gi|255993592|gb|EEU03681.1| di-trans,poly-cis-decaprenylcistransferase [Eubacterium saphenum
ATCC 49989]
Length = 233
Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/234 (39%), Positives = 133/234 (56%), Gaps = 17/234 (7%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA L GH G+ E+V + +G+K LT++AFS N++R E+S
Sbjct: 1 MDGNGRWARQNKLSILRGHNAGMLRVKEVVKESDRLGVKYLTVYAFSTENFKRSSEEVSG 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
+ L+ F+ + +NN+KV V+G+ + ++ LK A D+T N GL +A N
Sbjct: 61 IFSLVCKFVDSELDEIFENNVKVGVLGDIDKIPENAAVSLKRAIDRTANNDGLVFNVAIN 120
Query: 138 YSSRDEISR----AIKNIFQDIESGSVCSHDVDSSLIAKYLDT----------SDVPDPD 183
Y R EI+R A K I DI SL+++ D +D+PDPD
Sbjct: 121 YGGRAEITRAARLACKEIINDIGGADAIDR---KSLLSRLCDLNEADLSKNMYADIPDPD 177
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
L+IRT GE+R+S+FLLWQ+AYSEFVF EYWP+F+ +++ + +Y R RRFG
Sbjct: 178 LVIRTSGEERISNFLLWQIAYSEFVFAKEYWPEFTPDVYRRCIEEYKNRQRRFG 231
>gi|14591368|ref|NP_143446.1| hypothetical protein PH1590 [Pyrococcus horikoshii OT3]
gi|6136146|sp|O59258|UPPS_PYRHO RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|3258019|dbj|BAA30702.1| 264aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 264
Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/239 (36%), Positives = 139/239 (58%), Gaps = 2/239 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + S P H+ IIMDGN RWA P GH G + EI+ E+GI+ LT+
Sbjct: 25 LIEKVKSGVLPKHVAIIMDGNRRWARKHEKPPWYGHLFGSKKLEEILEWCHELGIRILTV 84
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFS N++R E+ L+KL + ++ + + ++V VIG + L + ++
Sbjct: 85 YAFSTENFKRSKEEVDRLMKLFEEKFRELVTDKRVHEYGVRVNVIGRKELLPKSVRDAVE 144
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
EAE TR L +A Y R EI A+K+I +D+ SG + ++D L+ +YL +
Sbjct: 145 EAERATRKYNNYILNVALAYGGRSEIVDAVKDIARDVISGKLRIEEIDEELLRRYLYVPN 204
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+PDPD++IRTGGE R+S+FLL+Q+AYSE F+ Y+P+F + F + ++ R+RRFG
Sbjct: 205 MPDPDIVIRTGGEVRISNFLLYQIAYSELFFVDVYFPEFRKIDFLRIIREFQKRERRFG 263
>gi|296119856|ref|ZP_06838410.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
ammoniagenes DSM 20306]
gi|295967010|gb|EFG80281.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
ammoniagenes DSM 20306]
Length = 223
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/221 (38%), Positives = 128/221 (57%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA RG+ R GH++G V ++V A +G+ L+ +AFS NWRR E+
Sbjct: 1 MDGNGRWAKERGMKRTEGHKRGEAVLLDVVEACLALGVPYLSAYAFSTENWRRSPDEVRF 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ + L++ L + ++V G R L ++ L+ AE T NT + L + N
Sbjct: 61 LMGFNRDVLRRQREWLNERGVRVVWAGRRPRLWRSVIRELEAAEKLTENNTKMTLVMCVN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R E++ A + + +D+++G++ V IA YL +PD DL +R GEKR S+F
Sbjct: 121 YGGRAELADAFRKMGEDVKAGTLNPSTVTEKTIANYLYDPGMPDVDLFLRPSGEKRTSNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
LLWQ AY+E V+ + +PDF+ E F A+ +Y RDRRFGG
Sbjct: 181 LLWQSAYAELVYQDKLFPDFTPEDLFAAVEEYARRDRRFGG 221
>gi|152990849|ref|YP_001356571.1| undecaprenyl diphosphate synthase [Nitratiruptor sp. SB155-2]
gi|151422710|dbj|BAF70214.1| undecaprenyl diphosphate synthase [Nitratiruptor sp. SB155-2]
Length = 225
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/230 (37%), Positives = 134/230 (58%), Gaps = 9/230 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVA-AAAEVGIKNLTIFAFSINNWR 69
P HI IIMDGNGRWA +GL R GH +G ++ +I A I+ LT++AFS NW+
Sbjct: 4 PRHIAIIMDGNGRWAQEKGLNRTKGHERGAQIVRDITKYCAIHPEIEVLTLYAFSTENWK 63
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ L++L+ +L+K + ++N I+ VIG+ ++ + + +D T+ T
Sbjct: 64 RPKKEVDFLMRLLDRWLQKELPTYQENEIRFVVIGDISKFSKNLQQRIIQVQDATKNFTK 123
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L +A NY RDEI RA K ++ +++ Y D + + D D++IRTG
Sbjct: 124 LTQVLALNYGGRDEIIRACKRAAKE-------GCEINEENFENYFD-AKLGDVDMLIRTG 175
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GEKR+S+FLLW++AY+E F YWPDF+ + + ++ R RRFGG+
Sbjct: 176 GEKRISNFLLWRIAYAELFFTDTYWPDFTSKELEKLIEEFKKRQRRFGGI 225
>gi|269127438|ref|YP_003300808.1| undecaprenyl diphosphate synthase [Thermomonospora curvata DSM
43183]
gi|268312396|gb|ACY98770.1| undecaprenyl diphosphate synthase [Thermomonospora curvata DSM
43183]
Length = 264
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/228 (40%), Positives = 130/228 (57%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I+MDGNGRWA RGLPR GH+ G +++ A E+GI L+ +AFS NW+R
Sbjct: 26 PRHVAIVMDGNGRWAKQRGLPRTEGHKMGEHSLFDVIMGAIELGIPYLSAYAFSTENWKR 85
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ L ++VR G R L ++ L+EAE T N L
Sbjct: 86 SPEEVRFLMGFNRDVIRRRRDQLHSMGVRVRWAGRRPRLWRSVIKELEEAERLTADNDVL 145
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L NY R EI+ A I +D+ +G + ++ + A+YL +VP+ DL +R G
Sbjct: 146 TLQFCVNYGGRAEITDAAAAIARDVAAGKLNPDKINEKVFARYLYRPEVPEVDLFLRPSG 205
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+RLS+FLLWQ AY+EFVF WPDF R + A Y RDRR+GG
Sbjct: 206 EQRLSNFLLWQSAYAEFVFQDVLWPDFDRRHLWQACEIYATRDRRYGG 253
>gi|218249817|ref|YP_002374648.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia burgdorferi
ZS7]
gi|218165005|gb|ACK75066.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia burgdorferi
ZS7]
Length = 230
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/236 (38%), Positives = 140/236 (59%), Gaps = 10/236 (4%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M SS P H+GIIMDGN RWA +GL G+++G++ EIV + ++GIK L+ + FS
Sbjct: 1 MNKSSLPSHVGIIMDGNRRWALGKGLSFSEGYKEGLKRAKEIVKHSLKIGIKYLSFYVFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+R EI EL+ LI S+L+ F KKN IK+ V G+ SL +++ +K++ +
Sbjct: 61 TENWKRDDCEIEELMFLIASYLRAEFNFYKKNGIKIIVSGDVDSLGEEVKSSIKDSVSFS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQ---DIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ L L +A NY R+EI RA++ D+ES ++ + + +LD ++PD
Sbjct: 121 KNFNNLVLNLAINYGGRNEILRAVRKFVSNNFDLES-------LNENTFSNFLDNPELPD 173
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRTGG R+S+F LW++AYSE +F WP++ + L + LR R FG
Sbjct: 174 LDLLIRTGGNIRISNFFLWRIAYSELIFSNVLWPEYYENRYSKDLECFQLRRRNFG 229
>gi|187917998|ref|YP_001883561.1| undecaprenyl pyrophosphate synthase [Borrelia hermsii DAH]
gi|119860846|gb|AAX16641.1| undecaprenyl pyrophosphate synthetase [Borrelia hermsii DAH]
Length = 230
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/234 (40%), Positives = 140/234 (59%), Gaps = 6/234 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M S+S P H+GIIMDGN RWA +GL GH++G++ EIV + ++GIK L+++ FS
Sbjct: 1 MSSNSLPMHVGIIMDGNRRWALKKGLSFFEGHKEGLKRAKEIVKHSLKLGIKYLSLYVFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW R SEI L+ LI +L F NNIK+ V G+ +L + + + +A + T
Sbjct: 61 TENWNRTKSEIEYLMFLIADYLSSEFEFYSANNIKILVSGDIEALSEKVRKSIIDAIEFT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
R GL L +A NY R+EI RA K I ++ G+ +D + +K+LD ++ D +
Sbjct: 121 RNFDGLMLNLAINYGGRNEIVRATKKILGSGLQFGT-----LDEVVFSKFLDNPELCDLE 175
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
L+IRTGG+ R+S+FLLW++AY EFVF WP++S + L + R R FG
Sbjct: 176 LLIRTGGDMRISNFLLWKIAYCEFVFSSALWPEYSISHYDRDLECFKNRKRNFG 229
>gi|192361948|ref|YP_001981612.1| undecaprenyl diphosphate synthase [Cellvibrio japonicus Ueda107]
gi|190688113|gb|ACE85791.1| undecaprenyl diphosphate synthase [Cellvibrio japonicus Ueda107]
Length = 249
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 135/232 (58%), Gaps = 1/232 (0%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M+ + H+ IIMDGN RWA RG+P +GH+ G+E +++AA E+ ++ LT+FAFS
Sbjct: 1 MTHNKLRHVAIIMDGNNRWAKQRGMPGVSGHKVGVERIRDVMAACQELEVEVLTVFAFSS 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NWRRP E+ L+ L + +LK +LKK ++ +RVIGNR I + AE TR
Sbjct: 61 ENWRRPPKEVDALMSLFQLYLKNEAKALKKKDVALRVIGNRSRFSPSIQQAIASAEAVTR 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
+ L IA +Y R +I++A +++ + G + ++D + +D+P DL+
Sbjct: 121 GGS-TTLVIAADYGGRWDIAQAAQHLAGQVARGELSVDEIDEHKLDSLTSLADLPPLDLL 179
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRTGGE R+S+FLLWQ AY+E F + WPDF A + R RRFG
Sbjct: 180 IRTGGELRISNFLLWQAAYAELYFSDKLWPDFDGSELKRAAESFYSRQRRFG 231
>gi|291544888|emb|CBL17997.1| Undecaprenyl pyrophosphate synthetase [Ruminococcus sp. 18P13]
Length = 246
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/231 (38%), Positives = 128/231 (55%), Gaps = 5/231 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG I+DGNGRWA RGLPR GHR+G + F I + I ++ +AFS NW+R
Sbjct: 19 PRHIGFILDGNGRWAKKRGLPRKLGHREGAKTFKTIARYCRNLNIPYISFYAFSTENWKR 78
Query: 71 PVSEISELVKLIKSFLK--KGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
P E+ L+KL ++ + F+ L+ K+ +G++ ++ + E T
Sbjct: 79 PKDEVDALMKLFDQYIDDVREFFDLE---TKLIFLGDKERFTPELREKMLAVERDTAHFD 135
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+ + IA NY RDEI A K + Q + G + + A+YL T+ VPD DL+IR
Sbjct: 136 KMTMMIAINYGGRDEIVHAAKQVAQLAKDGQLDPDTLTEEQFAQYLYTAGVPDVDLLIRP 195
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE RLS++++WQ AY+EF F WPDFS + AL + R RRFGG+
Sbjct: 196 SGELRLSNYMIWQCAYAEFYFTNVLWPDFSPKELDKALIDFAGRGRRFGGV 246
>gi|256809986|ref|YP_003127355.1| undecaprenyl diphosphate synthase [Methanocaldococcus fervens AG86]
gi|256793186|gb|ACV23855.1| undecaprenyl diphosphate synthase [Methanocaldococcus fervens AG86]
Length = 277
Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/242 (38%), Positives = 141/242 (58%), Gaps = 12/242 (4%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S+ ++ P H+ IIMDGN R A R GH G E +++ A ++GIK +T++AF
Sbjct: 39 SIDKNNLPKHVAIIMDGNRRAAEIYEKDRYYGHYLGAEKVKDVLRWARDLGIKVVTLYAF 98
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSL------KKNNIKVRVIGNRLSLDDDILCVL 117
S N++RP E+ +L++L +K FY + K ++VR IG L ++ +
Sbjct: 99 STENFKRPKEEVEKLMEL----FEKKFYEIADDEEVHKYKVRVRAIGRINLLPKNVQKAI 154
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
K AED+T+ + + +A Y + EI A+K I + ++ G V D+D LI K+L T+
Sbjct: 155 KYAEDKTKNYSEFFINVAIAYGGQQEIIDAVKKIAEKVKKGEVKPEDIDKELIDKHLYTA 214
Query: 178 DVP--DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
D+P +PDLIIRT GE+R+S+FL+WQ +YSE F YWP F R F A+ +Y R RR
Sbjct: 215 DLPFPNPDLIIRTSGEERISNFLIWQSSYSELYFCDIYWPLFRRVDFLRAIREYQRRHRR 274
Query: 236 FG 237
FG
Sbjct: 275 FG 276
>gi|50842426|ref|YP_055653.1| undecaprenyl pyrophosphate synthetase [Propionibacterium acnes
KPA171202]
gi|282854114|ref|ZP_06263451.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
J139]
gi|50840028|gb|AAT82695.1| undecaprenyl pyrophosphate synthetase [Propionibacterium acnes
KPA171202]
gi|282583567|gb|EFB88947.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
J139]
Length = 268
Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/226 (38%), Positives = 124/226 (54%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ I+MDGNGRWA RGL R GH +G + +++ A E+GI L+ +AFS NW+R
Sbjct: 33 HVAIVMDGNGRWARQRGLRRTEGHARGEDALFDVIEGAIEMGIPYLSAYAFSTENWKRSP 92
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+ L+ + + + L +++R G R L ++ L+ AE Q+ NT L L
Sbjct: 93 DEVRWLMGFNRDVIHRRRDQLDAMGVRIRWAGRRPKLWKSVIKELESAEKQSADNTVLTL 152
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
NY R EI A+++I + G + + +LD +VPD DL R+ GE+
Sbjct: 153 QFCVNYGGRAEIVDAVRDIARLTAEGKIDPDHITEKTFRTHLDEPEVPDVDLFWRSSGEQ 212
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R S+FLLWQ AY+E VF WPD R + A+ +Y RDRRFGG
Sbjct: 213 RTSNFLLWQSAYAEMVFSDVLWPDVDRRDLWAAVMEYAKRDRRFGG 258
>gi|311742975|ref|ZP_07716783.1| di-trans,poly-cis-decaprenylcistransferase [Aeromicrobium marinum
DSM 15272]
gi|311313655|gb|EFQ83564.1| di-trans,poly-cis-decaprenylcistransferase [Aeromicrobium marinum
DSM 15272]
Length = 255
Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 132/227 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I+MDGNGRWA ARGLPR AGH G ++V A EVG+ ++ +AFS NW+R
Sbjct: 27 PGHVAIVMDGNGRWAKARGLPRTAGHEMGEAALFDVVEGAIEVGVTAVSAYAFSTENWKR 86
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ + + ++VR G R L ++ L+ AE+ TR N L
Sbjct: 87 SPEEVRFLMGFNRDVIRRRRDQMHELGVRVRWAGRRPRLWRSVIKELEAAEELTRDNRVL 146
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R E++ A + +D+ +G V + VD + A+YLD D+ D DL RT G
Sbjct: 147 TLTMCVNYGGRAEVADAAAALARDVAAGRVNPNRVDERVFARYLDEPDMADVDLFWRTSG 206
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+R S+FLLWQ AY+E VF WPD R + A+ +Y R RR+G
Sbjct: 207 EQRTSNFLLWQSAYAEMVFSDIAWPDVDRLALWAAIEEYAARHRRYG 253
>gi|45644744|gb|AAS73132.1| predicted undecaprenyl pyrophosphate synthetase [uncultured marine
gamma proteobacterium EBAC20E09]
Length = 243
Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/230 (42%), Positives = 137/230 (59%), Gaps = 6/230 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P IGIIMDGNGRWA L GH KG+ V +IV I++LTI+AFS NW R
Sbjct: 12 PKKIGIIMDGNGRWAKLNKLKINKGHEKGVGVVRDIVKECIAQNIESLTIYAFSSENWSR 71
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN-TG 129
P SEI+ + KLI + + L + N+ + G+ + D+I + +AED T +
Sbjct: 72 PQSEINGIKKLIVKAIHEQVPELMEQNVMLDFFGDISNWGDEISRKINKAEDDTFIEYPS 131
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP--DLIIR 187
L L +A Y R++I A I + ++S + + D+D +IAK+ S VPD DLIIR
Sbjct: 132 LRLNVALGYGGRNDIVSASIRIAEHLKSDLISTGDIDEDMIAKF---SQVPDDNIDLIIR 188
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
TGG+KRLS+FLL+Q AY+E F+ + WPDF+R+ F + L+ + DRRFG
Sbjct: 189 TGGDKRLSNFLLFQAAYAEIFFVDKLWPDFTRDDFKNCLDAFKKTDRRFG 238
>gi|126642018|ref|YP_001085002.1| undecaprenyl pyrophosphate synthetase [Acinetobacter baumannii ATCC
17978]
gi|184158416|ref|YP_001846755.1| undecaprenyl pyrophosphate synthase [Acinetobacter baumannii ACICU]
gi|183210010|gb|ACC57408.1| Undecaprenyl pyrophosphate synthase [Acinetobacter baumannii ACICU]
Length = 222
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 82/213 (38%), Positives = 131/213 (61%)
Query: 30 LPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKG 89
+ + GHR+G V + IV + G++ LT+FAFS NW RP E+ L+KL++ + +
Sbjct: 1 MQKGDGHREGKNVLDPIVEHCVKTGVRALTVFAFSSENWNRPQYEVDLLMKLLEETIHEQ 60
Query: 90 FYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIK 149
+KK NI +R IG+R L ++ ++++AE QT + + L IA +Y +I+ A K
Sbjct: 61 IPRMKKFNIALRFIGDRSRLPSHLVALMEDAEQQTAHHDAMTLTIAVSYGGMWDIANAAK 120
Query: 150 NIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVF 209
+ Q + G + + ++ L KY+ +D+P DL+IRTGG+ R+S+FLLWQ AY+E F
Sbjct: 121 QVAQAVSRGEIDADQINVDLFEKYVSLNDLPAVDLLIRTGGDFRISNFLLWQAAYAELYF 180
Query: 210 IPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
WP+F+ E F HALN ++ R+RRFG S++
Sbjct: 181 TDTLWPEFTVEEFDHALNVFSGRERRFGKTSEQ 213
>gi|261838544|gb|ACX98310.1| undecaprenyl pyrophosphate synthase [Helicobacter pylori 51]
Length = 234
Score = 169 bits (428), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 135/227 (59%), Gaps = 1/227 (0%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPK 66
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
SE+ L+K++K +LK + N+I+ + IG+ ++ + + E+ T+
Sbjct: 67 SEVDFLMKMLKKYLKDERSTYLDNHIRFKAIGDLEGFSKELRDTILQLENDTKHFKDFTQ 126
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A NY S++E+SR K++ + S +++ I+ LDT D+P+ DL++RTGGE
Sbjct: 127 VLALNYGSKNELSRVFKSLLESPPSNISLLESLENE-ISNRLDTRDLPEVDLLLRTGGEM 185
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 186 RLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 232
>gi|282891921|ref|ZP_06300400.1| hypothetical protein pah_c200o080 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498181|gb|EFB40521.1| hypothetical protein pah_c200o080 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 263
Score = 169 bits (428), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 125/231 (54%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P H+ II DGN RWA + GHR+G + EIV A E+G++ +T +AFS N
Sbjct: 33 SITPRHVAIIPDGNRRWAKKQQASAKVGHREGADNLIEIVKACKELGVQVVTFYAFSTEN 92
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP E+ L+ L+ +L + ++ + I IG+ + ++ + E + T+
Sbjct: 93 WARPQEEVQALMWLLDVYLVEQRETMLQEGICFDTIGDLSKIPANVAETIAETKRFTKQC 152
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+ + +A NY RD+I RA+ I D + IAKYLDT+D+ DPDL+IR
Sbjct: 153 DQIRMVLAVNYGGRDDICRAVNQIVDDCMQQRGTPEKITEEAIAKYLDTADIGDPDLLIR 212
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
T GE R+S+FLLWQ++Y+E WPDF+ AL + R RR GG
Sbjct: 213 TSGEWRISNFLLWQISYAEVYVTDVLWPDFTPAHLLEALYDFQKRKRRLGG 263
>gi|315084413|gb|EFT56389.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL027PA2]
Length = 268
Score = 169 bits (428), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/226 (38%), Positives = 124/226 (54%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ I+MDGNGRWA RGL R GH +G + +++ A E+GI L+ +AFS NW+R
Sbjct: 33 HVAIVMDGNGRWARQRGLRRTEGHARGEDALFDVIEGAIEMGIPYLSAYAFSTENWKRSP 92
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+ L+ + + + L +++R G R L ++ L+ AE Q+ NT L L
Sbjct: 93 DEVRWLMGFNRDVIHRRRDQLDAMGVRIRWAGRRPKLWKSVIKELESAEKQSTDNTVLTL 152
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
NY R EI A+++I + G + + +LD +VPD DL R+ GE+
Sbjct: 153 QFCVNYGGRAEIVDAVRDIARLAAEGKIDPDHITEKTFRTHLDEPEVPDVDLFWRSSGEQ 212
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R S+FLLWQ AY+E VF WPD R + A+ +Y RDRRFGG
Sbjct: 213 RTSNFLLWQSAYAEMVFSDVLWPDVDRRDLWAAVVEYAKRDRRFGG 258
>gi|289425570|ref|ZP_06427347.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
SK187]
gi|289427255|ref|ZP_06428971.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
J165]
gi|295130502|ref|YP_003581165.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
SK137]
gi|289154548|gb|EFD03236.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
SK187]
gi|289159724|gb|EFD07912.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
J165]
gi|291375317|gb|ADD99171.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
SK137]
gi|332675338|gb|AEE72154.1| undecaprenyl pyrophosphate synthase [Propionibacterium acnes 266]
Length = 268
Score = 169 bits (428), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/226 (38%), Positives = 124/226 (54%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ I+MDGNGRWA RGL R GH +G + +++ A E+GI L+ +AFS NW+R
Sbjct: 33 HVAIVMDGNGRWARQRGLRRTEGHARGEDALFDVIEGAIEMGIPYLSAYAFSTENWKRSP 92
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+ L+ + + + L +++R G R L ++ L+ AE Q+ NT L L
Sbjct: 93 DEVRWLMGFNRDVIHRRRDQLDAMGVRIRWAGRRPKLWKSVIKELESAEKQSTDNTVLTL 152
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
NY R EI A+++I + G + + +LD +VPD DL R+ GE+
Sbjct: 153 QFCVNYGGRAEIVDAVRDIARLAAEGKIDPDHITEKTFRTHLDEPEVPDVDLFWRSSGEQ 212
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R S+FLLWQ AY+E VF WPD R + A+ +Y RDRRFGG
Sbjct: 213 RTSNFLLWQSAYAEMVFSDVLWPDVDRRDLWAAVVEYAKRDRRFGG 258
>gi|56416456|ref|YP_153530.1| putative undecaprenyl diphosphate synthase [Anaplasma marginale
str. St. Maries]
gi|56387688|gb|AAV86275.1| putative undecaprenyl diphosphate synthase [Anaplasma marginale
str. St. Maries]
Length = 232
Score = 169 bits (428), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/238 (36%), Positives = 141/238 (59%), Gaps = 12/238 (5%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S M+ P H+ +IMDGNGRWA +RGLP+ + +G+ ++V A I++LT++AF
Sbjct: 2 SAMAHKLPKHVAVIMDGNGRWAKSRGLPKIEAYTQGMLAAKKVVEACVHHAIRHLTLYAF 61
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKK----NNIKVRVIGNRLSLDDDILCVLKE 119
S+ NW R E+S+++ L ++L L+K + + +R +G+ L D++ + +
Sbjct: 62 SLENWLRSTEEVSDIMSLFTNYLSSP--ELRKLSDDHGVSIRFVGDLKLLRADLVERMSD 119
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV 179
+ TR N L L +A +Y ++ +I +A+ ++SG VD + ++ T D+
Sbjct: 120 IQSVTRNNDALYLNVAVSYGAKQDIIQAVNAA---LDSGV---ESVDGETLRSFMWTKDL 173
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PD DL+IR GGEKR+S+FLLWQ+AY+E F WPDF+ F AL+ Y R+R++G
Sbjct: 174 PDVDLLIRAGGEKRISNFLLWQLAYAELYFCDIMWPDFTAAHFSDALDSYLARNRKYG 231
>gi|317508572|ref|ZP_07966233.1| di-trans,poly-cis-decaprenylcistransferase [Segniliparus rugosus
ATCC BAA-974]
gi|316253116|gb|EFV12525.1| di-trans,poly-cis-decaprenylcistransferase [Segniliparus rugosus
ATCC BAA-974]
Length = 259
Score = 169 bits (427), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 132/231 (57%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S + P H+ +IMDGNGRWA RGLPR GH++G V ++V + E+G+ L+ +AFS
Sbjct: 27 SGAVPKHVALIMDGNGRWAQQRGLPRTEGHKRGESVLMDLVHGSLEIGVTWLSAYAFSTE 86
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW R SE+ L+ + +++ + + +++R G R L ++ L+ A + T+
Sbjct: 87 NWSRSPSEVKFLMGFNRDVIRRRRDEMHELGVRIRWAGRRPRLWRSVIAELESAMELTKR 146
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NT +NL + NY +R E++ A I + G + + + K+L D+PD DL++
Sbjct: 147 NTKMNLVMCVNYGARAELADAASRIGALAKEGKLNPDKLTEEGLRKFLYVPDMPDVDLML 206
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
R GE R+S+FLLWQ AY+E V + +PD R + A +Y R+RRFG
Sbjct: 207 RPSGEMRVSNFLLWQSAYAELVVQDKLFPDIDRRDLWAACEEYARRNRRFG 257
>gi|308161827|gb|EFO64259.1| Undecaprenyl pyrophosphate synthase [Giardia lamblia P15]
Length = 266
Score = 169 bits (427), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 137/238 (57%), Gaps = 9/238 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA + R GH +G+ V +V GI+ LT++AFS NW R
Sbjct: 3 PTHVAVIMDGNGRWARRQLQERSFGHEQGVAVLESVVDECISCGIRFLTVYAFSTENWSR 62
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS-LDDDILCVLKEAEDQTRLNTG 129
P +E+S L +L+ + +++ + ++ ++KV+ G R + + ++++ + E T TG
Sbjct: 63 PPAEVSFLFELLSATIQRVRATYRERDVKVQFCGERTAQIPENVITAMNCIEQDTATCTG 122
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSH-----DVDSSLIAKYLDT---SDVPD 181
L L + FNY EI++A +++ D G + + + +DT + +P
Sbjct: 123 LILSVCFNYGGHTEIAQACRSVLADCLDGDAVENIRARLQMPIEQFIQQIDTHLYASLPP 182
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DL+IRTG EKRLS+FL W +AY+E +FI WP+FS + F L+++ R RRFGG+
Sbjct: 183 VDLLIRTGCEKRLSNFLPWHLAYAEIIFIDLLWPEFSVQAFKECLDEFASRTRRFGGV 240
>gi|222474825|ref|YP_002563240.1| undecaprenyl diphosphate synthase (uppS) [Anaplasma marginale str.
Florida]
gi|254994685|ref|ZP_05276875.1| undecaprenyl diphosphate synthase (uppS) [Anaplasma marginale str.
Mississippi]
gi|255002797|ref|ZP_05277761.1| undecaprenyl diphosphate synthase (uppS) [Anaplasma marginale str.
Puerto Rico]
gi|255003931|ref|ZP_05278732.1| undecaprenyl diphosphate synthase (uppS) [Anaplasma marginale str.
Virginia]
gi|222418961|gb|ACM48984.1| undecaprenyl diphosphate synthase (uppS) [Anaplasma marginale str.
Florida]
Length = 236
Score = 169 bits (427), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 86/238 (36%), Positives = 141/238 (59%), Gaps = 12/238 (5%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S M+ P H+ +IMDGNGRWA +RGLP+ + +G+ ++V A I++LT++AF
Sbjct: 6 SAMAHKLPKHVAVIMDGNGRWAKSRGLPKIEAYTQGMLAAKKVVEACVHHAIRHLTLYAF 65
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKK----NNIKVRVIGNRLSLDDDILCVLKE 119
S+ NW R E+S+++ L ++L L+K + + +R +G+ L D++ + +
Sbjct: 66 SLENWLRSTEEVSDIMSLFTNYLSSP--ELRKLSDDHGVSIRFVGDLKLLRADLVERMSD 123
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV 179
+ TR N L L +A +Y ++ +I +A+ ++SG VD + ++ T D+
Sbjct: 124 IQSVTRNNDALYLNVAVSYGAKQDIIQAVNAA---LDSGV---ESVDGETLRSFMWTKDL 177
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PD DL+IR GGEKR+S+FLLWQ+AY+E F WPDF+ F AL+ Y R+R++G
Sbjct: 178 PDVDLLIRAGGEKRISNFLLWQLAYAELYFCDIMWPDFTAAHFSDALDSYLARNRKYG 235
>gi|297625078|ref|YP_003706512.1| undecaprenyl diphosphate synthase [Truepera radiovictrix DSM 17093]
gi|297166258|gb|ADI15969.1| undecaprenyl diphosphate synthase [Truepera radiovictrix DSM 17093]
Length = 310
Score = 169 bits (427), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 95/240 (39%), Positives = 133/240 (55%), Gaps = 6/240 (2%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S+ S S P HIG+IMDGN R+A + GL AGH G E++ E+GI ++T++ F
Sbjct: 70 SVRSGSLPRHIGLIMDGNRRFARSVGLDVTAGHDYGAGKAREVLEWCFELGIPHVTLWGF 129
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLK--KNNIKVRVIGNRLSLDDDILCVLKEAE 121
S +N R SE+S L L K+ K +N ++VRVIG+ ++ L+E E
Sbjct: 130 STDNRGRAQSEVSHLHSLFARQAKEMVQDPKIHRNRVRVRVIGDIGDFPPEVQAALREVE 189
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSV----CSHDVDSSLIAKYLDTS 177
T + L +A Y R+EI A++N+ +D + + V + I ++L T+
Sbjct: 190 RATEHYDKMQLNVAVGYGGREEIVAAVRNLLRDEAHAHLRPAELAERVSADTIGQHLYTA 249
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
VPDPD IIRT GE RLS FLLWQ AYSE+ F +WP F + F AL Y R+RRFG
Sbjct: 250 GVPDPDFIIRTSGEVRLSGFLLWQAAYSEYYFCDAFWPSFRKVDFLRALRSYQARERRFG 309
>gi|319786510|ref|YP_004145985.1| undecaprenyl diphosphate synthase [Pseudoxanthomonas suwonensis
11-1]
gi|317465022|gb|ADV26754.1| undecaprenyl diphosphate synthase [Pseudoxanthomonas suwonensis
11-1]
Length = 232
Score = 169 bits (427), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 87/225 (38%), Positives = 130/225 (57%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA R PR GHR G + GI LT+FAFS NW RP E++
Sbjct: 1 MDGNGRWAQRRRRPRVVGHRAGARAAERTIDFCLAHGIDALTLFAFSSENWGRPEEEVNA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+KL L++ +L K +++R IG+R I + AE QT N+ L L +A +
Sbjct: 61 LMKLFLGALEREVGALDKRGVRLRFIGDRERFAPKIRERMAAAEAQTAGNSRLELAVAAS 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I+ A + + +++ +G + +D + ++ ++ SD+P PDL IRTGG+ R+S+F
Sbjct: 121 YGGRQDIAVAARALAREVAAGRLDPEQIDEAAMSAHVALSDLPPPDLFIRTGGDHRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
LLWQ+AY+E F WPD ++ HAL+ + R+RRFG S +
Sbjct: 181 LLWQLAYTELWFTDTLWPDVDAKVLQHALDDFGRRERRFGLTSAQ 225
>gi|188577167|ref|YP_001914096.1| undecaprenyl diphosphate synthase [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|188521619|gb|ACD59564.1| undecaprenyl diphosphate synthase [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 236
Score = 169 bits (427), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 88/225 (39%), Positives = 127/225 (56%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA R PR GHR G N + E G+ LT+FAFS NW RP E+
Sbjct: 1 MDGNGRWAQRRRRPRVIGHRAGARAVNRTIDFCLEKGVSALTLFAFSSENWGRPQDEVDA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+KL L + L++ ++VR IG+R + + AE T N L L IA +
Sbjct: 61 LMKLFLHALDREVGELQRRGVQVRFIGDRSRFAAPLRDRMAGAERSTAANARLVLSIAAS 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I+ A + + +D+ +G + +D +L++ + +D+P PDL IRTGG+ R+S+F
Sbjct: 121 YGGRQDIATAARALAEDVAAGRLQPEQIDEALLSSRVALADLPAPDLFIRTGGDTRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
LLWQ+AY+E F WP+F + AL+ Y R+RRFG S +
Sbjct: 181 LLWQLAYTELWFTETLWPEFDAGVMQQALDDYAGRERRFGLTSAQ 225
>gi|300743812|ref|ZP_07072832.1| di-trans,poly-cis-decaprenylcistransferase [Rothia dentocariosa
M567]
gi|300380173|gb|EFJ76736.1| di-trans,poly-cis-decaprenylcistransferase [Rothia dentocariosa
M567]
Length = 259
Score = 168 bits (426), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 91/241 (37%), Positives = 132/241 (54%), Gaps = 7/241 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M S+ P HIG+++DGN RWAA RGL GH G E + + A++GI +T+
Sbjct: 21 MATSLTPQMLPTHIGVLVDGNRRWAAQRGLSTREGHAAGAERIIDFLGWCADLGIPQVTL 80
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S N +RP E++ L+ +I FL++ + ++ V +GN + ++ L+
Sbjct: 81 YMLSTENLKRPADELTGLIAVIDEFLRR-LRTAQQG--PVHAVGNVSLIPHELRNTLERV 137
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDT 176
+T G+ + IA Y R EI A++ + D E+ D+ +L I++ L T
Sbjct: 138 IAETAPLPGVRVNIAVGYGGRQEIVDAVRELILDAEAQGCSMRDLADTLNVEDISRRLYT 197
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
D+PDPDL+IRT GE+RLS FL WQ AYSEF F WPDF+R F AL Y R RRF
Sbjct: 198 RDMPDPDLLIRTSGEQRLSGFLTWQSAYSEFYFCQALWPDFTRVDFLRALRDYAGRTRRF 257
Query: 237 G 237
G
Sbjct: 258 G 258
>gi|224031383|gb|ACN34767.1| unknown [Zea mays]
Length = 306
Score = 168 bits (426), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 130/232 (56%), Gaps = 3/232 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P H+ ++MDGN RWA RGL GH+ G +VA + GI+ LT F S N
Sbjct: 70 SLPRHVAVVMDGNSRWARERGLTPADGHKAGGRNLERVVALSRAWGIRALTAFVCSRENL 129
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP +E+ ++ L + + L + I+++VIG+ + + +A++ TR N+
Sbjct: 130 SRPKAEVDYMMGLSEWLIGDNIDKLSRQGIRLQVIGDAAKMPASLRSAAAQADEATRQNS 189
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD---PDLI 185
L++ +A YS R ++ +A + + ++ ++ + D+D S+IA L TS + PDL+
Sbjct: 190 QLHVMLAICYSGRWDMVQACRELAREAQANRLSPDDIDESIIAGKLATSAAGEFSCPDLV 249
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRT GE RLS+FLLWQ AYSE F + WPDF + AL + RDRRFG
Sbjct: 250 IRTSGEMRLSNFLLWQSAYSELFFTAKMWPDFGEAEYLEALRSFQGRDRRFG 301
>gi|194702840|gb|ACF85504.1| unknown [Zea mays]
Length = 306
Score = 168 bits (426), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 130/232 (56%), Gaps = 3/232 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P H+ ++MDGN RWA RGL GH+ G +VA + GI+ LT F S N
Sbjct: 70 SLPRHVAVVMDGNSRWARERGLTPADGHKAGGRNLERVVALSRAWGIRALTAFVCSRENL 129
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP +E+ ++ L + + L + I+++VIG+ + + +A++ TR N+
Sbjct: 130 SRPKAEVDYMMGLSEWLIGDNIDKLSRQGIRLQVIGDAAKMPASLRSAAAQADEATRQNS 189
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD---PDLI 185
L++ +A YS R ++ +A + + ++ ++ + D+D S+IA L TS + PDL+
Sbjct: 190 QLHVMLAICYSGRWDMVQACRELAREAQANRLSPDDIDESIIAGKLATSAAGEFSCPDLV 249
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRT GE RLS+FLLWQ AYSE F + WPDF + AL + RDRRFG
Sbjct: 250 IRTSGEMRLSNFLLWQSAYSELFFTAKMWPDFGEAEYLEALRSFQGRDRRFG 301
>gi|317178484|dbj|BAJ56272.1| putative undecaprenyl pyrophosphate synthase [Helicobacter pylori
F30]
Length = 234
Score = 168 bits (426), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 84/227 (37%), Positives = 135/227 (59%), Gaps = 1/227 (0%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPK 66
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
SE+ L+K++K +LK + N+I+ + IG+ ++ + + E+ T
Sbjct: 67 SEVDFLMKMLKKYLKDERSTYLDNHIRFKAIGDLEGFSKELRDTILQLENDTGHFKDFTQ 126
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A NY S++EISRA K++ + S +++ I+ LDT ++P+ DL++RTGGE
Sbjct: 127 VLALNYGSKNEISRAFKSLLESPPSNISLLESLENE-ISNRLDTHNLPEVDLLLRTGGEM 185
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 186 RLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 232
>gi|119719672|ref|YP_920167.1| undecaprenyl diphosphate synthase [Thermofilum pendens Hrk 5]
gi|119524792|gb|ABL78164.1| Undecaprenyl pyrophosphate synthetase [Thermofilum pendens Hrk 5]
Length = 268
Score = 168 bits (426), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 132/233 (56%), Gaps = 5/233 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW-R 69
P H+ I+DGN RWA RG P GHR G E +E++ ++G+ +T++ S N R
Sbjct: 36 PRHVAFILDGNRRWARRRGFPPWMGHRFGAEKVDEVLDWCYDLGVVTVTLYVLSTENLER 95
Query: 70 RPVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
R E+ + +++ + + S L + ++V+ IG+ L DI ++E E++TR
Sbjct: 96 RSKEELENIFGILREKIDELASSEELHRRQVRVKFIGDIKRLPVDIQEKMRELEERTRSY 155
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP--DPDLI 185
L IA Y R EI A++ I ++ SG + ++D L AKYL T D P +PDL+
Sbjct: 156 NKRYLNIAVAYGGRHEILEAVRQIAVEVRSGRLSPEEIDEKLFAKYLYTGDEPHPEPDLV 215
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
IRT GE R+S+FLLWQ+AYSE VF+ YWPDF R F A+ Y R RR G
Sbjct: 216 IRTSGEVRISNFLLWQIAYSELVFLDVYWPDFRRIDFLRAIRTYQSRQRRKGA 268
>gi|238792750|ref|ZP_04636381.1| Di-trans,poly-cis-decaprenylcistransferase [Yersinia intermedia
ATCC 29909]
gi|238727858|gb|EEQ19381.1| Di-trans,poly-cis-decaprenylcistransferase [Yersinia intermedia
ATCC 29909]
Length = 230
Score = 168 bits (426), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 84/223 (37%), Positives = 129/223 (57%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA RG R GH+ G++ V+ AA + LT++AFS NW RP E++
Sbjct: 1 MDGNGRWAKNRGKLRVFGHKAGVKSVRRAVSFAANHHLDALTLYAFSSENWNRPAQEVTA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L L SL K+N+++ VIG+ + + ++ +E T N GL L IA N
Sbjct: 61 LMELFVRALDSEVKSLHKHNVRLSVIGDISRFSERLQQRIRRSEALTANNDGLKLNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I + ++ + + ++ G + D+ + ++ + + DL+IRTGGE R+S+F
Sbjct: 121 YGGRWDIIQGVRQLAEQVQQGELQPTDICEESLNSHICLHEQSEVDLVIRTGGEHRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LLWQ+AY+E F WPDF +F ALN + R+RRFGG +
Sbjct: 181 LLWQIAYAELYFTDVLWPDFDEHVFEGALNAFAQRERRFGGTT 223
>gi|224373190|ref|YP_002607562.1| undecaprenyl diphosphate synthase [Nautilia profundicola AmH]
gi|223588901|gb|ACM92637.1| undecaprenyl diphosphate synthase [Nautilia profundicola AmH]
Length = 220
Score = 168 bits (425), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 92/229 (40%), Positives = 138/229 (60%), Gaps = 12/229 (5%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAE-VGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA RGL R GH+KG E +I A+ I LT++AFS NW+RP
Sbjct: 2 HLAIIMDGNGRWAKKRGLKRIEGHKKGAETVRKITEYCAKNEEISVLTLYAFSTENWKRP 61
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E+ L+KL++ +L+K + KN+IK IG+ + + ++ +++T+ N L
Sbjct: 62 KMEVEFLMKLLEGYLEKELETYIKNDIKFETIGDISKFSEKLKKRIQLTKEKTKNNKKLT 121
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP-DPDLIIRTGG 190
+A NY S++EI+RA+K + + E + ++ ++L D+P D DL+IRT G
Sbjct: 122 QVLALNYGSKNEITRAVKKLIEKNE--EITEENIQNNL--------DLPRDVDLLIRTSG 171
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+FLLWQ AY+E F WPDF+ E + ++LR+RRFGG+
Sbjct: 172 EIRLSNFLLWQCAYAEMFFTNTLWPDFTPEELDKIIKSFHLRERRFGGV 220
>gi|289192043|ref|YP_003457984.1| undecaprenyl diphosphate synthase [Methanocaldococcus sp. FS406-22]
gi|288938493|gb|ADC69248.1| undecaprenyl diphosphate synthase [Methanocaldococcus sp. FS406-22]
Length = 277
Score = 168 bits (425), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 92/242 (38%), Positives = 141/242 (58%), Gaps = 12/242 (4%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S+ ++ P H+ IIMDGN R A G R GH G E +++ A ++GIK +T++AF
Sbjct: 39 SIDKNNLPKHVAIIMDGNRRAAEIYGRDRYYGHYLGAEKVRDVLRWARDLGIKVVTLYAF 98
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNN------IKVRVIGNRLSLDDDILCVL 117
S N++RP E+ +L++L +K FY + + ++VR IG L ++ +
Sbjct: 99 STENFKRPREEVDKLMEL----FEKKFYEIADDEEIHEYEVRVRAIGRIHLLPKNVQKAI 154
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
K AE++T+ + +A Y + EI A+K I + ++ G + D+D LI K+L T+
Sbjct: 155 KYAEERTKNYNKFFVNVAIAYGGQQEIIDAVKKIAEKVKRGEIKPEDIDKELIDKHLYTA 214
Query: 178 DVP--DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
D+P +PDLIIRT GE+R+S+FL+WQ +YSE F YWP F R F A+ +Y R RR
Sbjct: 215 DLPFPNPDLIIRTSGEERISNFLIWQSSYSELYFCDIYWPLFRRVDFLRAVREYQRRQRR 274
Query: 236 FG 237
FG
Sbjct: 275 FG 276
>gi|110004373|emb|CAK98711.1| undecaprenyl pyrophosphate synthetase protein [Spiroplasma citri]
Length = 235
Score = 168 bits (425), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 131/232 (56%), Gaps = 9/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI II+DGNGRWA +GL R GH +G + ++ A +G+K LTI+ FS NW+R
Sbjct: 4 PQHIAIILDGNGRWATKQGLERTVGHEEGAKRIKDVALKANALGVKYLTIYCFSTENWKR 63
Query: 71 PVSEISELVKLIKSFLK-KGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
E++ L+ + + L K + K NI + IG R + L + A QT+ N G
Sbjct: 64 NAQEVTYLMAMPERLLNNKQVNNFKNENIVLNHIGRRTKMPPKTLAAINNAILQTKDNNG 123
Query: 130 LNLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+ L AF+Y + +E+ AI + + + S +D + ++L T+D+PD DL+IR
Sbjct: 124 MVLTFAFDYGAIEELLTAINQMLVKKLTS-------IDEKTLFQHLYTADLPDVDLMIRC 176
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
GGE+RLS+FLL Q Y+E F +WP+F A+ YN R+RRFGG+
Sbjct: 177 GGEQRLSNFLLLQNRYAELYFTKAFWPEFDENALTAAILDYNNRNRRFGGIE 228
>gi|227504558|ref|ZP_03934607.1| undecaprenyl diphosphate synthase [Corynebacterium striatum ATCC
6940]
gi|227198878|gb|EEI78926.1| undecaprenyl diphosphate synthase [Corynebacterium striatum ATCC
6940]
Length = 250
Score = 167 bits (424), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 130/228 (57%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI ++MDGNGRWA RG+ R GHR+G V ++V A + I L+ +AFS NWRR
Sbjct: 21 PKHIALVMDGNGRWAEERGMKRTEGHRRGEAVLLDVVDACLSMNIPYLSAYAFSTENWRR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + L++ L + ++V +G R L ++ L+ A++ T+ NT +
Sbjct: 81 SPEEVRFLMAFNRDVLRRQREWLNEKGVRVVWVGRRPRLWRSVIKELETAQELTKNNTRM 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + NY R E+ ++ + + G + ++ + ++ L +PD DL +R G
Sbjct: 141 TLAMCVNYGGRAELVDGVRKLADQVAKGELKPSAINEASLSAALYDPTMPDVDLFLRPSG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
EKR S+FLLWQ AY+E ++ + +PDF+ E + A+ +Y RDRRFGG
Sbjct: 201 EKRTSNFLLWQSAYAEMIYQDKLFPDFTPEDLYAAVEEYARRDRRFGG 248
>gi|224532182|ref|ZP_03672814.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia valaisiana
VS116]
gi|224511647|gb|EEF82053.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia valaisiana
VS116]
Length = 230
Score = 167 bits (424), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 93/236 (39%), Positives = 139/236 (58%), Gaps = 10/236 (4%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M +S P H+GIIMDGN RWA +GL G+++G++ EIV + +VGIK L+ + FS
Sbjct: 1 MNKNSLPRHVGIIMDGNRRWALGKGLSFLEGYKEGLKRAKEIVKHSLKVGIKYLSFYVFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+R EI +L+ LI S+L+ F KKN IK+ V G+ SL +++ +K++ +
Sbjct: 61 TENWKRNDCEIEKLMFLIASYLRAEFNFYKKNGIKIIVSGDIDSLSEEVKSSIKDSTSFS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQ---DIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ L L +A NY R+EI RAIK D+ES +D + + +LD ++PD
Sbjct: 121 KNFNNLILNLAINYGGRNEILRAIKKFVSSDFDLES-------LDENTFSNFLDNPELPD 173
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRTGG R+S+F LW++AYSE +F WP++ + L + R R FG
Sbjct: 174 LDLLIRTGGNIRISNFFLWRIAYSELIFSNVLWPEYYGNEYSKDLECFQFRIRNFG 229
>gi|238784885|ref|ZP_04628885.1| Di-trans,poly-cis-decaprenylcistransferase [Yersinia bercovieri
ATCC 43970]
gi|238714202|gb|EEQ06214.1| Di-trans,poly-cis-decaprenylcistransferase [Yersinia bercovieri
ATCC 43970]
Length = 230
Score = 167 bits (424), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 131/223 (58%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA +G R GH+ G++ V+ AA + LT++AFS NW RP E++
Sbjct: 1 MDGNGRWAKNQGKLRVFGHKAGVKSVRRAVSFAATHHLDALTLYAFSSENWNRPAQEVTA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L L SL K+N+++ VIG+ + + ++ +E T N GL L IA N
Sbjct: 61 LMELFVRALDSEVKSLHKHNVRLSVIGDISRFSERLQQRIRRSEVLTANNDGLKLNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I + ++++ + ++ G + D++ + ++ + + DL+IRTGGE R+S+F
Sbjct: 121 YGGRWDIIQGVRHLAEQVQRGELQPTDINEESLNSHICLHEQSEVDLVIRTGGEHRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LLWQ+AY+E F WPDF +F ALN + R+RRFGG +
Sbjct: 181 LLWQIAYAELYFTDVLWPDFDEHVFEGALNAFAQRERRFGGTT 223
>gi|195628034|gb|ACG35847.1| undecaprenyl pyrophosphate synthetase [Zea mays]
Length = 307
Score = 167 bits (424), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 130/232 (56%), Gaps = 3/232 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P H+ ++MDGN RWA RGL GH+ G +VA + GI+ LT F S N
Sbjct: 71 SLPRHVAVVMDGNSRWARERGLTPADGHKAGGRNLERVVALSRAWGIRALTAFVCSRENL 130
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP +E+ ++ L + + L + I+++VIG+ + + +A++ TR N+
Sbjct: 131 SRPKAEVDYMMGLSEWLIGDNIDKLSRQGIRLQVIGDAAKMPASLRSAAAQADEATRHNS 190
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD---PDLI 185
L++ +A YS R ++ +A + + ++ ++ + D+D S+IA L TS + PDL+
Sbjct: 191 QLHVMLAICYSGRWDMVQACRELAREAQANRLSPDDIDESVIAGKLATSAAGEFSCPDLV 250
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRT GE RLS+FLLWQ AYSE F + WPDF + AL + RDRRFG
Sbjct: 251 IRTSGEMRLSNFLLWQSAYSELFFTGKMWPDFGEAEYLEALRSFQGRDRRFG 302
>gi|149192505|ref|ZP_01870688.1| undecaprenyl pyrophosphate synthase [Vibrio shilonii AK1]
gi|148833662|gb|EDL50716.1| undecaprenyl pyrophosphate synthase [Vibrio shilonii AK1]
Length = 219
Score = 167 bits (424), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 80/206 (38%), Positives = 128/206 (62%)
Query: 32 RCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFY 91
R GH+KG+ + ++ AA++ I+ +T+FAFS NWRRP E+ L++L S L
Sbjct: 1 RVFGHKKGVSAVRKTISTAAKLNIQAVTLFAFSSENWRRPEDEVGLLMELFISVLSSEIN 60
Query: 92 SLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNI 151
L +NN+++ +IG++ +D + + EAE T NTG + IA NY + +I +A K +
Sbjct: 61 KLHQNNLRLCIIGDKSRFNDRLQRKIAEAEKLTENNTGTVINIAANYGGKWDILQATKTL 120
Query: 152 FQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIP 211
+E G + + D+ +I +Y+ SD+PD DL+IRT GE R+S+F+LWQ+AY+E F
Sbjct: 121 AGLVERGELSADDITEDMIGRYVTMSDLPDVDLLIRTSGECRISNFMLWQMAYAEMYFTD 180
Query: 212 EYWPDFSRELFFHALNQYNLRDRRFG 237
EYWP+F+ + A+ + R+RRFG
Sbjct: 181 EYWPEFNEDSLIKAITWFVNRERRFG 206
>gi|227503135|ref|ZP_03933184.1| undecaprenyl diphosphate synthase [Corynebacterium accolens ATCC
49725]
gi|227076196|gb|EEI14159.1| undecaprenyl diphosphate synthase [Corynebacterium accolens ATCC
49725]
Length = 223
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/222 (37%), Positives = 128/222 (57%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA +G+ R GHR+G V ++V A G+ L+ +AFS NWRR E+
Sbjct: 1 MDGNGRWAQEKGMKRTEGHRRGEAVLLDVVDACLAAGVPYLSAYAFSTENWRRSPEEVRF 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ + L++ L + ++V +G R L ++ L+ AE+ T+ NT + L + N
Sbjct: 61 LMGFNRDVLRRQREWLHERGVRVVWVGRRPRLWRSVIKELEAAEELTKNNTKMTLAMCVN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R E+ ++ I + + +G + D+ S IA+ L +PD DL +R GEKR S+F
Sbjct: 121 YGGRAEMVDGVRQIAEKVAAGEIRPRDIRESTIAENLYDPGMPDVDLFLRPSGEKRTSNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
LLWQ AY+E ++ + +PDF+ E F A+ +Y RDRRFG +
Sbjct: 181 LLWQSAYAEMIYQDKLFPDFTPEDLFAAIEEYARRDRRFGAV 222
>gi|13541431|ref|NP_111119.1| undecaprenyl pyrophosphate synthase [Thermoplasma volcanium GSS1]
gi|42560004|sp|Q97B58|UPPS_THEVO RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|14324815|dbj|BAB59742.1| hypothetical protein [Thermoplasma volcanium GSS1]
Length = 258
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/231 (41%), Positives = 132/231 (57%), Gaps = 6/231 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+GII DGN R+A G+P GH KG E++ E+ IK +T +AFS N++R
Sbjct: 29 PRHVGIITDGNRRYARIVGIPENEGHVKGKNKVEEVLDWCMELDIKIVTFYAFSTENFKR 88
Query: 71 PVSEISELVKLIK----SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
E+ L LI S LK + KN I V+VIGN L + + +K E+ T+
Sbjct: 89 SPEEVDFLFHLINDAFISLLKDE--RVYKNKINVKVIGNVSMLPEYLRETIKITEETTKN 146
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
+ ++ +A Y R+EI AIK I +D +G + ++D S YL ++PDPDLI+
Sbjct: 147 FSNYHMNLAIGYGGREEILDAIKRIARDAIAGKINVDEIDESKFRNYLYDGNLPDPDLIL 206
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE+R+S+FLLWQ AYSE F YWP+FS+ F A+ Y R RRFG
Sbjct: 207 RTSGEERISNFLLWQSAYSELYFSDVYWPEFSKLDFLRAIYSYQRRQRRFG 257
>gi|226505658|ref|NP_001149894.1| undecaprenyl pyrophosphate synthetase [Zea mays]
gi|195635319|gb|ACG37128.1| undecaprenyl pyrophosphate synthetase [Zea mays]
Length = 307
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 130/232 (56%), Gaps = 3/232 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P H+ ++MDGN RWA RGL GH+ G +VA + GI+ LT F S N
Sbjct: 71 SLPRHVAVVMDGNSRWARERGLTPADGHKAGGRNLERVVALSRAWGIRALTAFVCSRENL 130
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP +E+ ++ L + + L + I+++VIG+ + + +A++ TR N+
Sbjct: 131 XRPKAEVDYMMGLSEWLIGDNIDKLSRQGIRLQVIGDAAKMPASLRSAAAQADEATRHNS 190
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD---PDLI 185
L++ +A YS R ++ +A + + ++ ++ + D+D S+IA L TS + PDL+
Sbjct: 191 QLHVMLAICYSGRWDMVQACRELAREAQANRLSPDDIDESVIAGKLATSAAGEFSCPDLV 250
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRT GE RLS+FLLWQ AYSE F + WPDF + AL + RDRRFG
Sbjct: 251 IRTSGEMRLSNFLLWQSAYSELFFTGKMWPDFGEAEYLEALRSFQGRDRRFG 302
>gi|148642156|ref|YP_001272669.1| undecaprenyl pyrophosphate synthase, UppS [Methanobrevibacter
smithii ATCC 35061]
gi|222444664|ref|ZP_03607179.1| hypothetical protein METSMIALI_00277 [Methanobrevibacter smithii
DSM 2375]
gi|261350796|ref|ZP_05976213.1| di-trans,poly-cis-decaprenylcistransferase [Methanobrevibacter
smithii DSM 2374]
gi|148551173|gb|ABQ86301.1| undecaprenyl pyrophosphate synthase, UppS [Methanobrevibacter
smithii ATCC 35061]
gi|222434229|gb|EEE41394.1| hypothetical protein METSMIALI_00277 [Methanobrevibacter smithii
DSM 2375]
gi|288860414|gb|EFC92712.1| di-trans,poly-cis-decaprenylcistransferase [Methanobrevibacter
smithii DSM 2374]
Length = 254
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/237 (37%), Positives = 136/237 (57%), Gaps = 3/237 (1%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARG-LPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
++ +S P H+ IIMDGN R++ +G + GH G++ +++ E+GI+ +T +A
Sbjct: 17 NLETSKMPKHVAIIMDGNRRYSKIQGNMDVVKGHEIGVDTLEKVLDWTIELGIEIVTAYA 76
Query: 63 FSINNWRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FS N+ RP E+ L+ L K+ + KN +KV+V+G L D++ + +A
Sbjct: 77 FSTENFNRPEHEVEGLMNLFFKNFKRLVDHEKIHKNEVKVKVVGRIDLLPDNVKEAINDA 136
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E+ T+ L +A Y R EI ++K I +DIE G + DVD LI+K L T+ +
Sbjct: 137 EEATKNYNKRQLNLAIGYDGRLEIVDSVKKIIRDIEKGLITVDDVDEDLISKNLYTAGLD 196
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DP+LIIRT GE+RLS FLLWQ +YSE F WP+ + F A+ Y R+RRFG
Sbjct: 197 DPNLIIRTSGEERLSGFLLWQSSYSELYFCESLWPELRKVDFLRAIRSYQERERRFG 253
>gi|109948079|ref|YP_665307.1| undecaprenyl pyrophosphate synthase [Helicobacter acinonychis str.
Sheeba]
gi|109715300|emb|CAK00308.1| undecaprenyl pyrophosphate synthetase [Helicobacter acinonychis
str. Sheeba]
Length = 223
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/222 (37%), Positives = 133/222 (59%), Gaps = 1/222 (0%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP SE+
Sbjct: 1 MDGNGRWARLKNKARAYGHKKGVKTLKDITIWCANYKLECLTLYAFSTENWKRPKSEVDF 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+K++K +LK + NNI+ R IG+ ++ + + E TR +A N
Sbjct: 61 LMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLESDTRYFKDFTQVLALN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y S++E+SRA K++ ++ ++ S + + I+ LDT D+P+ DL++RTGGE RLS+F
Sbjct: 121 YGSKNELSRAFKSLLEN-PPDNIESLESLENEISNRLDTHDLPEVDLLLRTGGEMRLSNF 179
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
LLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 180 LLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 221
>gi|294852497|ref|ZP_06793170.1| di-trans,poly-cis-decaprenylcistransferase [Brucella sp. NVSL
07-0026]
gi|294821086|gb|EFG38085.1| di-trans,poly-cis-decaprenylcistransferase [Brucella sp. NVSL
07-0026]
Length = 180
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 77/162 (47%), Positives = 109/162 (67%)
Query: 82 IKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSR 141
+K F+++ L +NN++V +IG R L +I +L EAE T NTGLNL IAFNY SR
Sbjct: 1 MKLFIRRDLAELHRNNVRVNIIGERAELAANIRALLNEAESLTHRNTGLNLVIAFNYGSR 60
Query: 142 DEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQ 201
DEI RA++++ +D+ +G + + + L++ LDT+ +PDPDLIIRT GE RLS+FLLWQ
Sbjct: 61 DEIVRAVRSLARDVAAGLLDPSSISAELVSANLDTAGIPDPDLIIRTSGEMRLSNFLLWQ 120
Query: 202 VAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
AYSEF+F+P +WPDF A + R+RRFGG+ +
Sbjct: 121 AAYSEFLFLPCHWPDFRPADLDAAYETFRQRERRFGGVEPRA 162
>gi|159119300|ref|XP_001709868.1| Undecaprenyl pyrophosphate synthase [Giardia lamblia ATCC 50803]
gi|157437986|gb|EDO82194.1| Undecaprenyl pyrophosphate synthase [Giardia lamblia ATCC 50803]
Length = 265
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 135/239 (56%), Gaps = 9/239 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA + R GH +G+ V IV GI+ LT++AFS NW R
Sbjct: 3 PMHVAVIMDGNGRWARKQLQERTFGHEQGVSVLESIVDECINCGIRFLTVYAFSTENWSR 62
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS-LDDDILCVLKEAEDQTRLNTG 129
P +E+S L +L+ + +++ + ++ N+KV+ G R + + + ++ + E T TG
Sbjct: 63 PPTEVSFLFELLSAAIQRVRTTYRERNVKVQFCGERTTQIPETVIAAMNCIEQDTAACTG 122
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSH-----DVDSSLIAKYLDT---SDVPD 181
L L + FNY EI++A +++ D G + + + +DT +++P
Sbjct: 123 LILSVCFNYGGHTEIAQACRSVLADCLEGDAVENIKTRLQMPIEQFIQQIDTHLYANLPP 182
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRTG EKRLS+FL W +AY+E +F WP+FS F L+++ R RRFGG+
Sbjct: 183 VDLLIRTGCEKRLSNFLPWHLAYAEIIFSDLLWPEFSVRAFKDCLDEFASRTRRFGGVQ 241
>gi|297620558|ref|YP_003708695.1| undecaprenyl pyrophosphate synthetase [Waddlia chondrophila WSU
86-1044]
gi|297375859|gb|ADI37689.1| undecaprenyl pyrophosphate synthetase [Waddlia chondrophila WSU
86-1044]
Length = 258
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/237 (34%), Positives = 131/237 (55%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + +S P H+ +I DGN RWA + GH+ G + I+ A ++GI+ LT F
Sbjct: 21 LEELHASPIPKHVALIPDGNRRWAKKHCILPEQGHKLGADSLLNIIKAGHQIGIETLTFF 80
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
FS NW RP EI+ +KL++ L + +N ++ R IG+ ++ ++ E
Sbjct: 81 IFSTENWLRPKKEINAQMKLLEKSLTLQKPRMLENGVRFRPIGDLSKFPPYLIELINRTE 140
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T +N+ A NY RD+I RA + E ++ +LI++YLDT + D
Sbjct: 141 QETAHLDNINVVFAMNYGGRDDIKRAFIKMLNAYEHRIFTKEEISENLISEYLDTCEWSD 200
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PDL+IRT GE R+S+FLLWQ++Y+E ++WP+FS F A+ ++ R+RR GG
Sbjct: 201 PDLLIRTSGESRISNFLLWQLSYAEIYLTKKHWPEFSPRDFLEAVIEFQHRERRLGG 257
>gi|157825710|ref|YP_001493430.1| undecaprenyl pyrophosphate synthetase [Rickettsia akari str.
Hartford]
gi|157799668|gb|ABV74922.1| Undecaprenyl pyrophosphate synthetase [Rickettsia akari str.
Hartford]
Length = 226
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/225 (40%), Positives = 127/225 (56%), Gaps = 6/225 (2%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGN RWA L + GH+ G + E++ + I +T++ FS NW+R
Sbjct: 6 HLAIIMDGNARWADWHNLTKSEGHKAGADKIRELLPEVINLNIPYITLYTFSSENWQRSN 65
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+E+ L+KL+ +LK SL KN +K++VIG L + + A + T N + L
Sbjct: 66 TEVDFLIKLLSIYLKNELNSLHKNGVKIKVIGRLNLLSSSLQKQINNAIELTENNNKITL 125
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IAF+Y SR EI A I I SG +V S I L ++PD DL+IR GG
Sbjct: 126 CIAFSYGSRQEIVDACTKI---IASG---KKEVSESDIQHALYDPEMPDVDLLIRAGGVY 179
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
R+S+FLLWQ AY+E F P+YWPDF+++ A+N Y+ R R FG
Sbjct: 180 RISNFLLWQAAYAELYFSPKYWPDFNKDDILEAINDYSKRKRTFG 224
>gi|156937379|ref|YP_001435175.1| undecaprenyl pyrophosphate synthetase [Ignicoccus hospitalis
KIN4/I]
gi|156566363|gb|ABU81768.1| Undecaprenyl pyrophosphate synthetase [Ignicoccus hospitalis
KIN4/I]
Length = 270
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/238 (39%), Positives = 132/238 (55%), Gaps = 3/238 (1%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + P H+ II DGN RWA RGL GHR+G + E++ E+GI+ +T+FA
Sbjct: 32 AEISKDHLPKHVAIIPDGNRRWARMRGLQEWLGHREGYKKMREVLMWLLELGIEVVTVFA 91
Query: 63 FSINNW-RRPVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVLKE 119
S N RR E +L +LI L++ + +N +KV VIG R ++L KE
Sbjct: 92 MSTENCTRRSPEEREKLYELIAGGLRELAKDEIVHRNEVKVMVIGRRNLWPKELLEAAKE 151
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV 179
E+ T+ + +A Y R EI A++ I ++ G + +D ++I ++L T ++
Sbjct: 152 VEEATKGYNKRVINVAVCYGGRQEIVDAVRKIAWKVKRGELEPDQIDENVITQHLYTENL 211
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDPDLIIRT GE+R+S+FLLWQ AYSE F YWP+ R AL Y R RRFG
Sbjct: 212 PDPDLIIRTSGEERISNFLLWQSAYSELYFANIYWPEIRRIDILRALRDYQRRQRRFG 269
>gi|258652080|ref|YP_003201236.1| undecaprenyl diphosphate synthase [Nakamurella multipartita DSM
44233]
gi|258555305|gb|ACV78247.1| undecaprenyl diphosphate synthase [Nakamurella multipartita DSM
44233]
Length = 273
Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/236 (38%), Positives = 135/236 (57%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ + + P H+ ++MDGNGRWA RGLPR GH++G ++V A E+G+ +L+ +AF
Sbjct: 22 ALPAGAVPRHVALVMDGNGRWAKQRGLPRTEGHKRGEAALFDVVEGAIEIGVTHLSAYAF 81
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + +++ + ++VR G R L ++ L+ AE
Sbjct: 82 STENWKRSPDEVRFLMGFNRDVIRRRRDDMHALGVRVRWAGRRPRLWRSVIKELEVAEQL 141
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T N L L + NY R EI+ A K I + +G + + VD L A+YLD D+PD D
Sbjct: 142 TAGNRVLTLTMCVNYGGRAEIADAAKAIAIEAAAGRLDPNKVDERLFARYLDEPDMPDVD 201
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+ +R GE R S+FLLWQ AY+E VF +PDF R + A +Y R RRFGG+
Sbjct: 202 MFLRPSGELRTSNFLLWQSAYAELVFQDTLYPDFDRRDLWRACQEYASRQRRFGGV 257
>gi|238759943|ref|ZP_04621097.1| Di-trans,poly-cis-decaprenylcistransferase [Yersinia aldovae ATCC
35236]
gi|238701850|gb|EEP94413.1| Di-trans,poly-cis-decaprenylcistransferase [Yersinia aldovae ATCC
35236]
Length = 230
Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/223 (37%), Positives = 128/223 (57%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA RG R GH+ G++ V+ AA + LT++AFS NW RP E++
Sbjct: 1 MDGNGRWAKNRGKLRVFGHKAGVKSVRRAVSFAATHHLDALTLYAFSSENWNRPAQEVTA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L L SL K+N+++ VIG+ + + ++ +E T N GL L IA N
Sbjct: 61 LMELFVRALDSEVKSLHKHNVRLSVIGDISRFSERLQERIRRSEALTANNDGLRLNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I + ++ + ++ G + D+ + ++ + + DL+IRTGGE R+S+F
Sbjct: 121 YGGRWDIIQGMRQLAAQVQRGELQPTDISEESLNSHICLHEQSEVDLVIRTGGEHRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LLWQ+AY+E F WPDF +F ALN + R+RRFGG +
Sbjct: 181 LLWQIAYAELYFTDVLWPDFDEHVFEGALNAFAQRERRFGGTT 223
>gi|294503066|ref|YP_003567128.1| undecaprenyl pyrophosphate synthetase [Yersinia pestis Z176003]
gi|262361103|gb|ACY57824.1| undecaprenyl pyrophosphate synthetase [Yersinia pestis D106004]
gi|294353525|gb|ADE63866.1| undecaprenyl pyrophosphate synthetase [Yersinia pestis Z176003]
Length = 230
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 129/223 (57%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA +G R GH+ G++ V+ AA+ + LT++AFS NW RP E++
Sbjct: 1 MDGNGRWAKNKGKLRVFGHKAGVKSVRRAVSFAAKHNLDALTLYAFSSENWNRPDQEVTA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L L SL K+N+++ +IG+ + ++ +E T N GL L IA N
Sbjct: 61 LMELFVRALDSEVKSLHKHNVRLSIIGDISRFSGRLQERIRRSEKLTANNDGLKLNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I + ++++ + ++ G + D+ + Y+ + DL+IRTGGE R+S+F
Sbjct: 121 YGGRWDIIQGVRHLAEQVQKGELQPTDISEESLNSYICLHEQSQVDLVIRTGGEHRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LLWQ+AY+E F WPDF +F ALN + R+RRFGG +
Sbjct: 181 LLWQIAYAELYFTDVLWPDFDENVFEGALNAFAQRERRFGGTT 223
>gi|320100343|ref|YP_004175935.1| Undecaprenyl pyrophosphate synthetase [Desulfurococcus mucosus DSM
2162]
gi|319752695|gb|ADV64453.1| Undecaprenyl pyrophosphate synthetase [Desulfurococcus mucosus DSM
2162]
Length = 280
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 128/230 (55%), Gaps = 3/230 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR- 69
P HIGII DGN RWA G GH G E E++ ++GI+ +TI+A S N +
Sbjct: 50 PRHIGIIPDGNRRWARRLGFDPSLGHIYGYERMKEVLKWIWDLGIRYVTIYAMSTENCKY 109
Query: 70 RPVSEISELVKLIKSFLK--KGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
R E L L + L+ + + + ++V+V G + DI+ + KE E +T
Sbjct: 110 RSNGEREHLFNLARKGLRELRELRDIHERKVRVKVFGTLDLVPSDIVELAKELEKETEKY 169
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L IA Y R EI A+K + +D+ G + D+ +KYL TS+ PDPDLIIR
Sbjct: 170 DSYQLNIALCYGGRQEILDAVKAVVRDVIDGKITVDDISEEAFSKYLYTSEAPDPDLIIR 229
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
T GE+R+S+FLLWQ AYSE F YWP+F + F+ A+ Y +R+RRFG
Sbjct: 230 TSGEERISNFLLWQSAYSELYFCDVYWPEFRKIDFWRAIRSYQMRERRFG 279
>gi|307721205|ref|YP_003892345.1| Undecaprenyl pyrophosphate synthetase [Sulfurimonas autotrophica
DSM 16294]
gi|306979298|gb|ADN09333.1| Undecaprenyl pyrophosphate synthetase [Sulfurimonas autotrophica
DSM 16294]
Length = 225
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 134/232 (57%), Gaps = 10/232 (4%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAA-EVGIKNLTIFAFSINN 67
+ HI IIMDGNGRWA +G R GH G +V EI + + I+ LT++AFS N
Sbjct: 2 NKAKHIAIIMDGNGRWAELQGKKRVKGHEAGAKVVKEITTYCSNDEDIERLTLYAFSTEN 61
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W+RP E+ L+KL++ +LK S +NN+K IG+ + + ++ E++T
Sbjct: 62 WKRPRLEVEFLMKLLEKYLKDELLSYLQNNVKFEAIGDIRAFSKSLQKTIQMVEEKTAHC 121
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
GL +A NY S+DEI RA+ ++ + E+ +V ++ LD D DL+IR
Sbjct: 122 DGLVQSLALNYGSQDEILRAVNSLKKHDENITV-------EMLNNALDCK--QDVDLLIR 172
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
TGG+KRLS+FLLWQ AY+E F WPDF+ + ++++ +RRFGGL
Sbjct: 173 TGGDKRLSNFLLWQSAYAELFFTDTLWPDFTCKELEKIIHKFTKVERRFGGL 224
>gi|256389945|ref|YP_003111509.1| undecaprenyl diphosphate synthase [Catenulispora acidiphila DSM
44928]
gi|256356171|gb|ACU69668.1| undecaprenyl diphosphate synthase [Catenulispora acidiphila DSM
44928]
Length = 257
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 132/231 (57%), Gaps = 7/231 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+IMDGN RWA G GH++G + +E++ A E G++ +T++ FS +N+ R
Sbjct: 29 PRHIGVIMDGNRRWAKQMGEQIATGHQRGADKIHEVLDWAEEAGVETVTLWLFSTDNFNR 88
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+++L+++I+ ++ +V +G + D LKE E+QTR N G+
Sbjct: 89 PADELTDLLRIIEGSVRS---LADTGRWRVHPLGALDLMPADFARHLKEIEEQTRDNPGI 145
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLDTSDVPDPDLII 186
++ +A Y R EI+ A++++ D + D+ D I ++L T DPDLII
Sbjct: 146 HVNVAIGYGGRREIADAVRSLLADAAARGTSIEDLVQMLDVEHITEHLYTQGQQDPDLII 205
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE+RLS F+LWQ A+SEF F YWP F + F AL Y R RR+G
Sbjct: 206 RTSGEQRLSGFMLWQSAHSEFYFCEAYWPAFRKVDFLRALRDYANRHRRYG 256
>gi|301165593|emb|CBW25164.1| undecaprenyl pyrophosphate synthetase [Bacteriovorax marinus SJ]
Length = 251
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/234 (40%), Positives = 136/234 (58%), Gaps = 5/234 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M + HI IIMDGNGRWA +R R GH +G ++ + IV A ++G K LT++AFS
Sbjct: 1 MKETNLKHIAIIMDGNGRWAQSRSHERIWGHIRGSKIVSNIVEEADDLGAKALTLYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RPV E+ L KL+K FL K + KNNI+ +V+G+ L + ++ E E+ ++
Sbjct: 61 ENWSRPVGEVKVLFKLLKKFLLKERNRILKNNIQFKVMGDITKLPEKTQSLIAELENDSK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N GL L AF Y RDEI +A ++ ++ L+ YL + D DL+
Sbjct: 121 DNKGLKLTFAFGYGGRDEIVQAANKFIKE-----NPGKELTEELLQSYLLMPHLGDVDLL 175
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRTGG++R+S+FLLWQ AY+E F WPDF+R+ F + R+RRFG +
Sbjct: 176 IRTGGDQRISNFLLWQSAYAELYFTQTKWPDFTRKEFKEIFEFVSKRERRFGNV 229
>gi|197124041|ref|YP_002135992.1| undecaprenyl diphosphate synthase [Anaeromyxobacter sp. K]
gi|220918813|ref|YP_002494117.1| undecaprenyl diphosphate synthase [Anaeromyxobacter dehalogenans
2CP-1]
gi|196173890|gb|ACG74863.1| undecaprenyl diphosphate synthase [Anaeromyxobacter sp. K]
gi|219956667|gb|ACL67051.1| undecaprenyl diphosphate synthase [Anaeromyxobacter dehalogenans
2CP-1]
Length = 251
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/227 (37%), Positives = 124/227 (54%), Gaps = 6/227 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RGLPR AGHR+G E + A VG++ LT++AFS NW R
Sbjct: 19 PRHVAIIMDGNGRWAETRGLPRVAGHREGSEAVRAVTRTARRVGLEALTLYAFSAENWAR 78
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L+ +L+ + +N I++ IG L + L A +T N +
Sbjct: 79 PDEEVGALMQLLADYLESERAEMMQNGIRLNAIGELDRLPGFVRERLDAARAETAGNDRM 138
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y R E+ + + + +D+ + L T +P+ DL++RT G
Sbjct: 139 VLTLALSYGGRQEL------VHAARAAAAARGPALDADDLEAALWTRGLPELDLLVRTSG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+R+S+FLLWQ AY+E F WPDF A+ + R+RRFG
Sbjct: 193 ERRISNFLLWQCAYAELYFSEVLWPDFRDAALLEAIASFQARERRFG 239
>gi|15892513|ref|NP_360227.1| undecaprenyl pyrophosphate synthetase [Rickettsia conorii str.
Malish 7]
gi|165933180|ref|YP_001649969.1| undecaprenyl pyrophosphate synthetase [Rickettsia rickettsii str.
Iowa]
gi|229586703|ref|YP_002845204.1| Undecaprenyl pyrophosphate synthetase [Rickettsia africae ESF-5]
gi|238650885|ref|YP_002916741.1| undecaprenyl pyrophosphate synthetase [Rickettsia peacockii str.
Rustic]
gi|42559858|sp|Q92I30|UPPS_RICCN RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|15619673|gb|AAL03128.1| undecaprenyl pyrophosphate synthetase [Rickettsia conorii str.
Malish 7]
gi|165908267|gb|ABY72563.1| undecaprenyl pyrophosphate synthetase [Rickettsia rickettsii str.
Iowa]
gi|228021753|gb|ACP53461.1| Undecaprenyl pyrophosphate synthetase [Rickettsia africae ESF-5]
gi|238624983|gb|ACR47689.1| undecaprenyl pyrophosphate synthetase [Rickettsia peacockii str.
Rustic]
Length = 235
Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/225 (39%), Positives = 126/225 (56%), Gaps = 6/225 (2%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGN RWA L + GH+ G + E++ + I +T++ FS NW+R
Sbjct: 15 HLAIIMDGNARWADQHNLTKSEGHKAGADKIRELLPEFLNLNIPYITLYTFSSENWQRSS 74
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+E+ L+KL+ +LK +L KN +K++VIG L + + A + T+ N + L
Sbjct: 75 TEVDFLIKLLSIYLKTELNNLHKNGVKIKVIGRLTLLSSSLQKQINNAIELTKNNNKITL 134
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IAF+Y SR EI A I I SG D D I L ++PD DL+IR GG
Sbjct: 135 CIAFSYGSRQEIVDACTKI---ITSGKKAVSDSD---IQHALYDPEMPDVDLLIRPGGVY 188
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
R+S+FLLWQ AY+E F P+YWPDF++ A+N Y+ R R FG
Sbjct: 189 RISNFLLWQAAYAELYFSPKYWPDFNKYDIQEAINDYSKRKRTFG 233
>gi|238060551|ref|ZP_04605260.1| undecaprenyl-diphosphate synthase [Micromonospora sp. ATCC 39149]
gi|237882362|gb|EEP71190.1| undecaprenyl-diphosphate synthase [Micromonospora sp. ATCC 39149]
Length = 270
Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/228 (39%), Positives = 129/228 (56%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I+MDGNGRWA RGLPR GH +G + + A E+GI L+ +AFS NWRR
Sbjct: 33 PKHVAIVMDGNGRWAKERGLPRTKGHEQGEHSLFDTIEGAIELGIPYLSAYAFSTENWRR 92
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ L ++V G L ++ L+ AE+ +R N+ L
Sbjct: 93 SPEEVRFLMGFNRDVIRRRRDQLVDLGVRVVWSGRAGRLWKSVISELQTAEEMSRGNSTL 152
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L NY + EI+ A I +D+ +G + V +AKYL ++P+ DL +R G
Sbjct: 153 TLQFCVNYGGQAEIADAAAAIARDVAAGRLDPGKVTEKTVAKYLYHPEIPEVDLFLRPSG 212
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R+S+FLLWQ AY+E VF+ WPDF R ++A Y RDRRFGG
Sbjct: 213 EERISNFLLWQTAYAELVFLDTLWPDFDRRHLWYACELYAQRDRRFGG 260
>gi|77414702|ref|ZP_00790834.1| undecaprenyl diphosphate synthase [Streptococcus agalactiae 515]
gi|77159246|gb|EAO70425.1| undecaprenyl diphosphate synthase [Streptococcus agalactiae 515]
Length = 204
Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/204 (42%), Positives = 120/204 (58%), Gaps = 4/204 (1%)
Query: 40 IEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIK 99
++ E+ AA+ +G+K LT++AFS NW RP E+ ++ L F K L KNN++
Sbjct: 1 MDALQEVTIAASGLGVKVLTVYAFSTENWSRPDDEVKFIMNLPVEFFDKYVPELDKNNVR 60
Query: 100 VRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGS 159
V+VIG+ L ++ A +T+ N+GL L A NY R EI+ AIK I QD+
Sbjct: 61 VQVIGDTHKLPKATYDAMQRACLRTKHNSGLVLNFALNYGGRSEITNAIKEIAQDVLEAK 120
Query: 160 VCSHDVDSSLIAKYLDTSDVP----DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWP 215
+ D+ L+A +L T+ +P DPDLIIRT GE RLS+FL WQ AYSEF F P WP
Sbjct: 121 LNPDDITEDLVANHLMTNSLPYLYRDPDLIIRTSGELRLSNFLPWQSAYSEFYFTPVLWP 180
Query: 216 DFSRELFFHALNQYNLRDRRFGGL 239
DF ++ A+ YN R RRFG +
Sbjct: 181 DFKKDELHKAIVDYNQRHRRFGSV 204
>gi|226228733|ref|YP_002762839.1| undecaprenyl pyrophosphate synthetase [Gemmatimonas aurantiaca
T-27]
gi|226091924|dbj|BAH40369.1| undecaprenyl pyrophosphate synthetase [Gemmatimonas aurantiaca
T-27]
Length = 271
Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 132/232 (56%), Gaps = 11/232 (4%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA ARG PR GH +G EIV+ A +GI LT++AFS +NW+R
Sbjct: 23 PAHVAIIMDGNGRWATARGRPRWMGHVRGAHTVKEIVSHCARLGIGQLTLYAFSSDNWKR 82
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L L S L++ SL K+ I++ +IG R L ++ + AE +T +
Sbjct: 83 PREEVGFLFDLFASHLERQLTSLIKHGIRLSIIGRRDRLPSALVEAIAVAEARTAAGRRM 142
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L +A +YSSR + +A+ SV + +A +T +P DL++RTGG
Sbjct: 143 HLRVAVDYSSRASLQKAL----------SVAAAVTPVDEVALTGETI-LPPVDLLVRTGG 191
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+RLSDFLLW+ AY+E F+ +PD + ++ R+RR+G + +
Sbjct: 192 ERRLSDFLLWECAYAELAFLDVNFPDLAMSELDAVFTDFSRRERRYGAVPAQ 243
>gi|8843799|dbj|BAA97347.1| undecaprenyl pyrophosphate synthetase-like [Arabidopsis thaliana]
Length = 226
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 91/229 (39%), Positives = 125/229 (54%), Gaps = 9/229 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGN RWA GL G+ G + E ++GI ++ FAFS NW R
Sbjct: 2 PRHVAVIMDGNRRWAKQTGLLTSQGYEAGAKRLLEFADLCFKLGINTVSAFAFSTENWGR 61
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
S I F+ K I+V VIGN + + +L + E E+ T+
Sbjct: 62 HKSFS------IAQFVTNNLVCFSKE-IRVSVIGNLAKIPESLLRTVHELEEATKSYKKK 114
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT--SDVPDPDLIIRT 188
+L +A +YS R +I A KNI + E G + DVD +L + L T ++ P PDL+IRT
Sbjct: 115 HLILAIDYSGRFDILGACKNIVKKSEQGLIREEDVDETLFERELQTRCTEFPSPDLLIRT 174
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
GE+R+S+F LWQ+AY+EF F P WPDF ++ F AL Y RDRRFG
Sbjct: 175 SGEQRISNFFLWQLAYTEFFFSPVLWPDFDKQKFIEALVSYQRRDRRFG 223
>gi|317182470|dbj|BAJ60254.1| putative undecaprenyl pyrophosphate synthase [Helicobacter pylori
F57]
Length = 234
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 135/227 (59%), Gaps = 1/227 (0%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPK 66
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
SE+ L+K++K +LK + N+I+ + IG+ ++ + + E+ T
Sbjct: 67 SEVDFLMKMLKKYLKDERSTYLDNHIRFKAIGDLEGFSKELRDTILKLENDTGHFKDFTQ 126
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A NY S++E+SRA K++ + S +++ I+ LDT ++P+ DL++RTGGE
Sbjct: 127 VLALNYGSKNELSRAFKSLLESPPSNINLLESLENE-ISNRLDTRNLPEVDLLLRTGGEM 185
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 186 RLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 232
>gi|51598383|ref|YP_072571.1| undecaprenyl pyrophosphate synthase [Borrelia garinii PBi]
gi|51572954|gb|AAU06979.1| undecaprenyl diphosphate synthase [Borrelia garinii PBi]
Length = 230
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 91/236 (38%), Positives = 137/236 (58%), Gaps = 10/236 (4%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M S P H+GIIMDGN RWA +GL G+ +G++ EIV + +VGIK L+ + FS
Sbjct: 1 MNKRSLPSHVGIIMDGNRRWALGKGLSSLEGYEEGLKRAKEIVKHSLKVGIKYLSFYVFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+R EI +L+ LI +L+ F KKN IK+ V G+ SL +++ +K++ +
Sbjct: 61 TENWKRDDCEIEKLMFLITHYLRAEFNFYKKNGIKIIVSGDVESLGEEVRSSIKDSVSFS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQ---DIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ L L +A NY R+EI RA+K D+ES ++ + + +LD ++PD
Sbjct: 121 KNFNNLVLNLAINYGGRNEILRAVKKFVSSNFDLES-------LNENAFSNFLDNPELPD 173
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRTGG R+S+F LW++AYSE +F WP++ + L + LR R FG
Sbjct: 174 IDLLIRTGGNIRISNFFLWRIAYSELIFSNVLWPEYYDNRYSKDLECFQLRGRNFG 229
>gi|157803817|ref|YP_001492366.1| undecaprenyl pyrophosphate synthetase [Rickettsia canadensis str.
McKiel]
gi|157785080|gb|ABV73581.1| undecaprenyl pyrophosphate synthetase [Rickettsia canadensis str.
McKiel]
Length = 226
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/227 (39%), Positives = 129/227 (56%), Gaps = 10/227 (4%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ I+MDGN RWA LP+ GHR G + E++ GI +T++ FS NW+R
Sbjct: 6 HLAIVMDGNARWADQNNLPKSTGHRTGADKIRELLPEFINFGIPYITLYTFSSENWQRSS 65
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+E+ L+KL +LK +L KN IK++VIG L+ + + A + T+ N + L
Sbjct: 66 TEVDFLIKLFSIYLKTELNNLHKNGIKIKVIGRLNLLNSSLQKQINNAIELTKNNNKITL 125
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESG--SVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
IAF+Y SR EI A I I SG V +D+ +L ++PD DL+IR+GG
Sbjct: 126 CIAFSYGSRQEIVDACTKI---IASGKKEVTENDLQDALY-----DPEMPDVDLLIRSGG 177
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
R+S+FLLWQ AY+E F +YWPDF ++ A+N Y+ R R FG
Sbjct: 178 VYRISNFLLWQAAYAELYFSSKYWPDFHKDDIQDAINDYSKRKRTFG 224
>gi|329935269|ref|ZP_08285235.1| undecaprenyl pyrophosphate synthetase [Streptomyces
griseoaurantiacus M045]
gi|329305092|gb|EGG48951.1| undecaprenyl pyrophosphate synthetase [Streptomyces
griseoaurantiacus M045]
Length = 257
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/233 (38%), Positives = 130/233 (55%), Gaps = 9/233 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+IMDGN RWA A G GHR G + E + +E ++ +T++ FS +N+ R
Sbjct: 29 PKHIGVIMDGNRRWAKAAGSTTAQGHRAGADKIEEFLGWCSETDVEVVTLWLFSTDNFDR 88
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNN-IKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
P E+ L +I+ + SL + +V +G L + VLKEAE+ T G
Sbjct: 89 PQEELVPLFGIIEDVAR----SLAADGRWRVHHVGALDLLPPGMQTVLKEAEEATADVDG 144
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVC----SHDVDSSLIAKYLDTSDVPDPDLI 185
+ + +A Y R EI+ A++++ D + + VD +I ++L TSD PDPDL+
Sbjct: 145 ILVNVAIGYGGRQEIADAVRSMLHDAQQKGTTMEQLAESVDIDMIGRHLYTSDQPDPDLV 204
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
IRT GE+RLS F+LWQ A+SE+ F +WP F + F AL Y R RRFGG
Sbjct: 205 IRTSGEQRLSGFMLWQTAHSEYYFCDVFWPAFRKVDFLRALRDYAARHRRFGG 257
>gi|312880147|ref|ZP_07739947.1| Undecaprenyl pyrophosphate synthetase [Aminomonas paucivorans DSM
12260]
gi|310783438|gb|EFQ23836.1| Undecaprenyl pyrophosphate synthetase [Aminomonas paucivorans DSM
12260]
Length = 239
Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 93/227 (40%), Positives = 134/227 (59%), Gaps = 5/227 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+G++MDGNGRWA RGLPR GH G++ +V AA + GI+ L+++AFS NW+R
Sbjct: 13 PAHVGMVMDGNGRWAKERGLPRVMGHHAGVKAVERVVQAAKDWGIRTLSLYAFSTENWKR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L + +L+ L++ ++R G L +DI +L+E+E+ TR N +
Sbjct: 73 PQGEVLGLMGLFRYYLRSKLDRLREERARLRFAGRLEDLPEDIREILRESEEATRDNDAI 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ I NY R E+ A+ I G VD ++L D+PDPDL+IR+ G
Sbjct: 133 TVVICINYGGRQEVLDAVNRILAQGTPGP-----VDDQAFRRHLYLPDLPDPDLLIRSSG 187
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+F L+Q AYSE+ F YWPDF E F AL Y R+RR+G
Sbjct: 188 ELRMSNFWLYQGAYSEYYFSSLYWPDFGPEEFEKALRDYAGRERRYG 234
>gi|238754802|ref|ZP_04616153.1| Di-trans,poly-cis-decaprenylcistransferase [Yersinia ruckeri ATCC
29473]
gi|238706962|gb|EEP99328.1| Di-trans,poly-cis-decaprenylcistransferase [Yersinia ruckeri ATCC
29473]
Length = 230
Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/223 (37%), Positives = 129/223 (57%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA +G R GH+ G++ V+ AA + LT++AFS NW RP E++
Sbjct: 1 MDGNGRWAKRQGKLRIFGHKAGVKSVRRAVSFAATHHLDALTLYAFSSENWNRPAQEVTA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L L SL K+N+++ VIG+ + ++ +E+ T N GL L IA N
Sbjct: 61 LMELFVRALDSEVKSLHKHNVRLSVIGDISRFSKRLQDRIRRSEELTANNDGLKLNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I + ++ + ++ G + D+ L+ ++ + + DL+IRTGGE R+S+F
Sbjct: 121 YGGRWDIIQGMRQLAGQVQKGLLQPEDITEELLNSHICLHEQSEVDLVIRTGGEHRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LLWQ+AY+E F WPDF +F ALN + R+RRFGG +
Sbjct: 181 LLWQIAYAELYFTDVLWPDFDELVFEGALNAFAQRERRFGGTT 223
>gi|34580494|ref|ZP_00141974.1| undecaprenyl pyrophosphate synthetase [Rickettsia sibirica 246]
gi|157828462|ref|YP_001494704.1| undecaprenyl pyrophosphate synthetase [Rickettsia rickettsii str.
'Sheila Smith']
gi|42559752|sp|Q7PBU9|UPPS_RICSI RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|28261879|gb|EAA25383.1| undecaprenyl pyrophosphate synthetase [Rickettsia sibirica 246]
gi|157800943|gb|ABV76196.1| undecaprenyl pyrophosphate synthetase [Rickettsia rickettsii str.
'Sheila Smith']
Length = 226
Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 89/225 (39%), Positives = 126/225 (56%), Gaps = 6/225 (2%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGN RWA L + GH+ G + E++ + I +T++ FS NW+R
Sbjct: 6 HLAIIMDGNARWADQHNLTKSEGHKAGADKIRELLPEFLNLNIPYITLYTFSSENWQRSS 65
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+E+ L+KL+ +LK +L KN +K++VIG L + + A + T+ N + L
Sbjct: 66 TEVDFLIKLLSIYLKTELNNLHKNGVKIKVIGRLTLLSSSLQKQINNAIELTKNNNKITL 125
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IAF+Y SR EI A I I SG D D I L ++PD DL+IR GG
Sbjct: 126 CIAFSYGSRQEIVDACTKI---ITSGKKAVSDSD---IQHALYDPEMPDVDLLIRPGGVY 179
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
R+S+FLLWQ AY+E F P+YWPDF++ A+N Y+ R R FG
Sbjct: 180 RISNFLLWQAAYAELYFSPKYWPDFNKYDIQEAINDYSKRKRTFG 224
>gi|288560262|ref|YP_003423748.1| undecaprenyl pyrophosphate synthetase UppS [Methanobrevibacter
ruminantium M1]
gi|288542972|gb|ADC46856.1| undecaprenyl pyrophosphate synthetase UppS [Methanobrevibacter
ruminantium M1]
Length = 254
Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/230 (37%), Positives = 133/230 (57%), Gaps = 3/230 (1%)
Query: 11 PDHIGIIMDGNGRWAAARG-LPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IIMDGN R++ +G + GH G + +++ + ++GI+ +T +AFS N+
Sbjct: 24 PRHVAIIMDGNRRYSRMKGDMEVIKGHELGADTLEKVLDWSIDLGIEIVTAYAFSTENFN 83
Query: 70 RPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
RP E+ L++L KK + K+ ++V+V+G L DD+ +KEAED T+
Sbjct: 84 RPEHEVEGLMRLFVENFKKIVDHEKIHKHKVRVKVVGRIELLPDDVREAIKEAEDSTKQY 143
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+A Y R EI AIK I++ +E G + D+D +L+++ L T+ + DP LIIR
Sbjct: 144 NERLFNLAIGYDGRLEIVDAIKKIYKKVEDGEISIDDIDENLVSENLYTAGLEDPSLIIR 203
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
T GE+RLS FLLWQ +YSE F WP+ + + A+ Y RDRRFG
Sbjct: 204 TSGEERLSGFLLWQSSYSELYFCDSLWPELRKVDYLRAIRDYQERDRRFG 253
>gi|15669562|ref|NP_248375.1| hypothetical protein MJ_1372 [Methanocaldococcus jannaschii DSM
2661]
gi|2501569|sp|Q58767|UPPS_METJA RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|1592017|gb|AAB99380.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
2661]
Length = 280
Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 92/235 (39%), Positives = 135/235 (57%), Gaps = 12/235 (5%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGN R A G R GH G E E++ A ++GI +T++AFS N+RR
Sbjct: 49 PKHVAIIMDGNRRAAEIYGKDRYYGHYLGAEKVREVLRWARDLGINVVTLYAFSTENFRR 108
Query: 71 PVSEISELVKLIKSFLKKGFYSL------KKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
P E+ +L++L +K FY + + ++VR IG L ++ +K AE++T
Sbjct: 109 PKEEVDKLMEL----FEKKFYEIADDEEIHRYEVRVRAIGRINLLPKNVQKAIKYAEERT 164
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP--DP 182
+ + IA Y + EI A+K I + ++ G + D+D LI K+L T+++P +P
Sbjct: 165 KNYNKFFVNIAIAYGGQQEIIDAVKKIAEKVKRGEIEPEDIDKELIDKHLYTANLPFPNP 224
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DLIIRT GE+R+S+FL+WQ +YSE F YWP F R F A+ Y R RRFG
Sbjct: 225 DLIIRTSGEERISNFLIWQSSYSELYFCDIYWPLFRRVDFLRAVRDYQRRQRRFG 279
>gi|262376191|ref|ZP_06069421.1| di-trans,poly-cis-decaprenylcistransferase [Acinetobacter lwoffii
SH145]
gi|262308792|gb|EEY89925.1| di-trans,poly-cis-decaprenylcistransferase [Acinetobacter lwoffii
SH145]
Length = 250
Score = 165 bits (418), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 86/242 (35%), Positives = 139/242 (57%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + +S P H+ IIMDGN R+A + + GHR+G V + IV + I+ LT+
Sbjct: 1 MTVAEENSRLPKHVAIIMDGNNRFAKKNQMQKGDGHREGKTVLDPIVEHCKKRNIQALTV 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW RP E+ L+KL+ + + ++K NI +R IG+R L ++ ++ A
Sbjct: 61 FAFSSENWNRPQFEVELLMKLLVDTIHEQLPRMEKFNIALRFIGDRSRLSPELQGLMLHA 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E++T + L IA +Y ++++A + I D+ + + +++ + +Y+ D+P
Sbjct: 121 EERTANFNSMTLTIAISYGGMWDMAQAAQRIASDVLTNKLDLDAINTDVFGQYVSLGDLP 180
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRTGG+ RLS+FLLWQ AY+E F WP+F+ E AL + R+RRFG S
Sbjct: 181 AVDLLIRTGGDFRLSNFLLWQAAYAELYFTETLWPEFTVEELDDALAVFGGRERRFGKTS 240
Query: 241 KK 242
++
Sbjct: 241 EQ 242
>gi|219684868|ref|ZP_03539810.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia garinii PBr]
gi|219671813|gb|EED28868.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia garinii PBr]
Length = 230
Score = 165 bits (418), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 90/236 (38%), Positives = 138/236 (58%), Gaps = 10/236 (4%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M +S P H+GIIMDGN RWA +GL G+ +G++ EIV + +VGIK L+ + FS
Sbjct: 1 MNKNSLPSHVGIIMDGNRRWALGKGLSSLEGYEEGLKRAKEIVKHSLKVGIKYLSFYVFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+R EI +L+ LI +L+ F KKN IK+ V G+ SL +++ +K++ +
Sbjct: 61 TENWKRDDCEIEKLMFLITHYLRAEFNFYKKNGIKIIVSGDVESLGEEVRSSIKDSVSFS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQ---DIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ L L +A NY R+EI RA++ D+ES ++ + + +LD ++PD
Sbjct: 121 KNFNNLILNLAINYGGRNEILRAVRKFVSSDFDLES-------LNENAFSNFLDNPELPD 173
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRTGG R+S+F LW++AYSE +F WP++ + L + LR R FG
Sbjct: 174 IDLLIRTGGNIRISNFFLWRIAYSELIFSNVLWPEYYDNRYSKDLECFQLRGRNFG 229
>gi|328907181|gb|EGG26947.1| undecaprenyl pyrophosphate synthetase [Propionibacterium sp. P08]
Length = 233
Score = 165 bits (418), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 83/221 (37%), Positives = 123/221 (55%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA RGL R GH +G + +++ A E+GI L+++AFS NW+R E+
Sbjct: 1 MDGNGRWAKQRGLKRTDGHARGEDALFDVIEGAIEMGIPYLSVYAFSTENWKRSPDEVRW 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ + + + L +++R G R L ++ L+ AE+Q+ NT L L N
Sbjct: 61 LMGFNRDVIHRRRDQLDAMGVRIRWAGRRPKLWKSVIKELESAEEQSADNTVLTLQFCVN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R EI A+++I + + G + + +LD ++PD DL R+ GE+R S+F
Sbjct: 121 YGGRAEIVDAVRDIARLVAEGKIDPDHITEKTFRTHLDEPEIPDVDLFWRSSGEQRTSNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
LLWQ AY+E VF WPD R + A+ +Y RDRRFGG
Sbjct: 181 LLWQSAYAEMVFSDVLWPDVDRRDLWDAVMEYAKRDRRFGG 221
>gi|223889163|ref|ZP_03623752.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia burgdorferi
64b]
gi|223885412|gb|EEF56513.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia burgdorferi
64b]
Length = 230
Score = 165 bits (418), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 91/236 (38%), Positives = 137/236 (58%), Gaps = 10/236 (4%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M S P H+GIIMDGN RWA +GL G+++G++ EIV + VGIK L+ + FS
Sbjct: 1 MNKGSLPSHVGIIMDGNRRWALGKGLSSLEGYKEGLKRAKEIVKYSLRVGIKYLSFYVFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRR EI L+ LI ++L+ F +KN IK+ V G+ SL ++ +K++ +
Sbjct: 61 TENWRRDDCEIENLMFLIANYLRAEFDFYEKNGIKIIVSGDVESLSGEVKSSIKDSISFS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQ---DIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ L L +A NY R+EI RA+K I D+ES ++ ++ + +LD ++PD
Sbjct: 121 KNFNNLILNLAINYGGRNEILRAVKKIVSSDFDLES-------LNENIFSSFLDNPELPD 173
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRTGG R+S+F LW++AYSE +F WP++ + L + R R FG
Sbjct: 174 LDLLIRTGGNIRISNFFLWRIAYSELIFSNVLWPEYYDTRYSKDLECFQFRRRNFG 229
>gi|313837268|gb|EFS74982.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL037PA2]
gi|314928057|gb|EFS91888.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL044PA1]
gi|314972039|gb|EFT16137.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL037PA3]
Length = 233
Score = 165 bits (417), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 83/221 (37%), Positives = 123/221 (55%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA RGL R GH +G + +++ A E+GI L+++AFS NW+R E+
Sbjct: 1 MDGNGRWAKQRGLKRTDGHARGEDALFDVIEGAIEMGIPYLSVYAFSTENWKRSPDEVRW 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ + + + L +++R G R L ++ L+ AE+Q+ NT L L N
Sbjct: 61 LMGFNRDVIHRRRDQLDAMGVRIRWAGRRPKLWKSVIKELESAEEQSADNTVLTLQFCVN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R EI A+++I + + G + + +LD ++PD DL R+ GE+R S+F
Sbjct: 121 YGGRAEIVDAVRDIARLVAEGKIDPDHITEKTFRTHLDEPEIPDVDLFWRSSGEQRTSNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
LLWQ AY+E VF WPD R + A+ +Y RDRRFGG
Sbjct: 181 LLWQSAYAEMVFSDVLWPDVDRRDLWDAVVEYAKRDRRFGG 221
>gi|269959130|ref|YP_003328919.1| undecaprenyl pyrophosphate synthase [Anaplasma centrale str.
Israel]
gi|269848961|gb|ACZ49605.1| undecaprenyl pyrophosphate synthase [Anaplasma centrale str.
Israel]
Length = 232
Score = 165 bits (417), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 90/239 (37%), Positives = 139/239 (58%), Gaps = 14/239 (5%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S M P H+ IIMDGN RWA +RGLP+ + KG+ ++V A IK+LT++AF
Sbjct: 2 SAMVHKLPRHVAIIMDGNRRWAESRGLPQMEAYTKGLSAAEKVVEACIGHSIKHLTLYAF 61
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKK----NNIKVRVIGNRLSLDDDILCVLKE 119
S+ NW R E+S+++ + S+L L+K +R +G+ L D++ ++ +
Sbjct: 62 SMENWFRNTEEVSDIMGMFASYLSSP--ELRKLADDYGASIRFVGDLKLLRIDVVELMFD 119
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD-IESGSVCSHDVDSSLIAKYLDTSD 178
+ TR N L L +A +Y +R +I +A+ IES VD ++ ++ T
Sbjct: 120 IQSVTRNNDALCLNVAVSYGARQDIIQAVNAALDSGIES-------VDGEMLNSFMWTKG 172
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+PD DL+IR+GGEKRLS+FLLWQ+AY+E F WPDF+ F +AL+ Y R+R++G
Sbjct: 173 LPDVDLLIRSGGEKRLSNFLLWQLAYAELYFCDTMWPDFTAAHFSNALDNYLARNRKYG 231
>gi|302553872|ref|ZP_07306214.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces
viridochromogenes DSM 40736]
gi|302471490|gb|EFL34583.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces
viridochromogenes DSM 40736]
Length = 257
Score = 165 bits (417), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 129/232 (55%), Gaps = 7/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+IMDGN RWA A G GHR G E + +E ++ +T++ S +N+ R
Sbjct: 29 PKHIGVIMDGNRRWAKAAGSSTVDGHRAGAGKIEEFLGWCSETDVEVVTLWLLSTDNFDR 88
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ +I+ ++ +V +G L + VLKEAE+ T G+
Sbjct: 89 PQEELGPLLGIIEDVVRT---LAADGRWRVHHVGTPDLLPSGMQTVLKEAEETTAHVDGI 145
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIE----SGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
+ +A Y R EI+ A++++ D + S + VD+ +I ++L TSD PDPDL+I
Sbjct: 146 LVNVAIGYGGRQEIADAVRSMLLDAQERGTSMEELTEAVDTDMIGRHLYTSDQPDPDLVI 205
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
RT GE+RLS F+LWQ A+SE+ F +WP F + F A+ Y R RRFGG
Sbjct: 206 RTSGEQRLSGFMLWQTAHSEYYFCDVFWPAFRKVDFLRAMRDYAARHRRFGG 257
>gi|183602376|ref|ZP_02963742.1| undecaprenyl pyrophosphate synthetase [Bifidobacterium animalis
subsp. lactis HN019]
gi|183218295|gb|EDT88940.1| undecaprenyl pyrophosphate synthetase [Bifidobacterium animalis
subsp. lactis HN019]
Length = 258
Score = 165 bits (417), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 137/231 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+G+IMDGNGRWA RGL R GH+ V + +A A E G++ L+++ FS NW+R
Sbjct: 28 PRHVGVIMDGNGRWAQQRGLIRTDGHQAAEPVVFDTIAGAIEAGVRYLSLYTFSTENWKR 87
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + + + + + ++VR G R L ++ L+ A ++T+ N +
Sbjct: 88 SPQEVRFLMGFSRDIIHRRVAQMDEWGVRVRWSGRRPKLWKSVIDELEVAMERTKRNKVI 147
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
++ NY R EI+ A I +++ G + V +I+++L D+PD DL+IRT G
Sbjct: 148 DVVFCINYGGRAEIADAAAAIAREVRDGRIKGDRVTEKMISEHLYNPDIPDCDLVIRTSG 207
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E+R S+FL W+ AY+E F+PE +PD R + + ++++Y RDRRFGG+ K
Sbjct: 208 EQRTSNFLPWEAAYAELDFVPELFPDCGRVVLWGSIDRYIHRDRRFGGVKK 258
>gi|225549267|ref|ZP_03770240.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia burgdorferi
94a]
gi|225370125|gb|EEG99565.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia burgdorferi
94a]
Length = 230
Score = 165 bits (417), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 90/236 (38%), Positives = 137/236 (58%), Gaps = 10/236 (4%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M S P H+GIIMDGN RWA +GL G+++G++ EIV + VGIK L+ + FS
Sbjct: 1 MNKGSLPSHVGIIMDGNRRWALGKGLSSLEGYKEGLKRAKEIVKYSLRVGIKCLSFYVFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRR EI L+ LI ++L+ F +KN IK+ V G+ SL +++ +K++ +
Sbjct: 61 TENWRRDYCEIENLMFLIANYLRAEFDFYEKNGIKIIVSGDIESLSEEVKSSIKDSISFS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQ---DIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ L L +A NY R+EI RA+K D+ES ++ ++ + +LD ++PD
Sbjct: 121 KNFNNLILNLAINYGGRNEILRAVKKFASSDFDLES-------LNENIFSSFLDNPELPD 173
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRTGG R+S+F LW++AYSE +F WP++ + L + R R FG
Sbjct: 174 LDLLIRTGGNIRISNFFLWRIAYSELIFSNVLWPEYYDTRYSKDLECFQFRRRNFG 229
>gi|297560286|ref|YP_003679260.1| undecaprenyl diphosphate synthase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296844734|gb|ADH66754.1| undecaprenyl diphosphate synthase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 564
Score = 165 bits (417), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 122/228 (53%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ +IMDGN RWA A GL GH G E +V AA ++GIK +T FAFS NW R
Sbjct: 330 PEHVAVIMDGNRRWALALGLAAVEGHMAGEEAMYRLVDAAGDLGIKYVTTFAFSTENWSR 389
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+S L K+ + L +++R G R ++ + L+ AE+ T N+G+
Sbjct: 390 SPEEVSSLFKVFARRVTGVTGRLHARGVRMRWYGRRTRIEAALRERLEWAEELTSGNSGV 449
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+Y R E+ A+K+ + SG + + S +A YL +PD DL+IRT G
Sbjct: 450 TFTFCLDYGGRQEMVDAVKHAAAEAFSGRLDPTRMAESDLAGYLYDPTLPDVDLLIRTAG 509
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S+FL W AY+E VF WPDF R A+N Y R R FGG
Sbjct: 510 EQRTSNFLPWHTAYAEIVFDDALWPDFDRSHLVRAVNAYAERRRSFGG 557
>gi|87303424|ref|ZP_01086212.1| Undecaprenyl pyrophosphate synthetase (UPPS) [Synechococcus sp. WH
5701]
gi|87282072|gb|EAQ74034.1| Undecaprenyl pyrophosphate synthetase (UPPS) [Synechococcus sp. WH
5701]
Length = 267
Score = 165 bits (417), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 82/230 (35%), Positives = 130/230 (56%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA R LPR GHR+G+E + ++ GI LT++AFS NW R
Sbjct: 31 PAHVAVIMDGNGRWARQRRLPRMMGHREGVEALKRTLRLCSDWGIGALTVYAFSTENWNR 90
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L + L + +L++ +++R +G+ L + + + AE +T NTG+
Sbjct: 91 PGEEVTFLMALFERVLARELQALERERVRIRFLGDLEQLPEGLQERIAAAEARTAANTGI 150
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ + NY R E+ + + + + G + + + L T+ DPDL+IR+ G
Sbjct: 151 HFNVCTNYGGRRELVQVARRLAERAARGDLDPAAISETHFEAELLTAGEVDPDLLIRSSG 210
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E R+S+FLLWQ+AY+E WPDF+ + A+ Y R RRFGG+
Sbjct: 211 EYRISNFLLWQLAYAEIHITDVLWPDFNEQALLRAVLDYQGRQRRFGGVE 260
>gi|217032233|ref|ZP_03437731.1| hypothetical protein HPB128_2g35 [Helicobacter pylori B128]
gi|216946104|gb|EEC24715.1| hypothetical protein HPB128_2g35 [Helicobacter pylori B128]
Length = 223
Score = 165 bits (417), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 83/222 (37%), Positives = 132/222 (59%), Gaps = 1/222 (0%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP SE+
Sbjct: 1 MDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPKSEVDF 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+K++K +LK + NNI+ R IG+ ++ + + E TR +A N
Sbjct: 61 LMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLESDTRHFKDFTQVLALN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y S++E+SRA K++ ++ + +++ I+ LDT D+P+ DL++RTGGE RLS+F
Sbjct: 121 YGSKNELSRAFKSLLENPPNNIDPLESLENE-ISNRLDTRDLPEVDLLLRTGGEMRLSNF 179
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
LLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 180 LLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 221
>gi|322518390|sp|C1K5M2|NDPS_SOLLC RecName: Full=Dimethylallylcistransferase, chloroplastic; AltName:
Full=Neryl-diphosphate synthase; Flags: Precursor
gi|226439923|gb|ACO56895.1| neryl diphosphate synthase 1 [Solanum lycopersicum]
Length = 303
Score = 164 bits (416), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 86/228 (37%), Positives = 133/228 (58%), Gaps = 5/228 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGN RWA +GL GH+ I EI ++++GI+ +T FAFS NW+R
Sbjct: 78 PKHIALIMDGNRRWAKDKGLEVYEGHKHIIPKLKEICDISSKLGIQIITAFAFSTENWKR 137
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+++ + + ++ ++V +IG + L + + E+ T+ N GL
Sbjct: 138 SKEEVDFLLQMFEEI----YDEFSRSGVRVSIIGCKSDLPMTLQKCIALTEETTKGNKGL 193
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L IA NY +I +A K+I +G + D++ +L + L+ S P+PDL+IRTGG
Sbjct: 194 HLVIALNYGGYYDILQATKSIVNKAMNGLLDVEDINKNLFDQELE-SKCPNPDLLIRTGG 252
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R+S+FLLWQ+AY+EF F +PDF E A+ + R RRFGG
Sbjct: 253 EQRVSNFLLWQLAYTEFYFTNTLFPDFGEEDLKEAIMNFQQRHRRFGG 300
>gi|303288207|ref|XP_003063392.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455224|gb|EEH52528.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 228
Score = 164 bits (416), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 86/225 (38%), Positives = 129/225 (57%), Gaps = 5/225 (2%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGN RWA+ARGL GH +G+E E+V A I +T+FAFS NWRR E+
Sbjct: 1 MDGNARWASARGLAPSIGHERGVEALREVVRCCAAWEIPAMTVFAFSHENWRRSREEVEH 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ L++ L+ +L K N++V V+G+ ++DD+ +++A D T N GL L +A +
Sbjct: 61 LMALLRDCLRDELPTLTKENVRVCVMGDLGMVEDDLRRAVRDAIDATSNNDGLRLCVALS 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT-----SDVPDPDLIIRTGGEK 192
Y R +I A + I + +G + ++ A+ L + V +PDL+IRT GE+
Sbjct: 121 YGGRQDIVAATRAIAAEASAGLLDPSEITERTFAERLASGRALPERVREPDLVIRTSGEQ 180
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RLS+FLLW+ AY+E F + WP+F A+ +Y R RRFG
Sbjct: 181 RLSNFLLWESAYAELYFCEKTWPEFDEAALRDAMGEYARRSRRFG 225
>gi|219683309|ref|YP_002469692.1| undecaprenyl pyrophosphate synthase [Bifidobacterium animalis
subsp. lactis AD011]
gi|241191270|ref|YP_002968664.1| undecaprenyl pyrophosphate synthase [Bifidobacterium animalis
subsp. lactis Bl-04]
gi|241196676|ref|YP_002970231.1| undecaprenyl pyrophosphate synthase [Bifidobacterium animalis
subsp. lactis DSM 10140]
gi|219620959|gb|ACL29116.1| di-trans,poly-cis-decaprenylcistransferase [Bifidobacterium
animalis subsp. lactis AD011]
gi|240249662|gb|ACS46602.1| undecaprenyl pyrophosphate synthetase [Bifidobacterium animalis
subsp. lactis Bl-04]
gi|240251230|gb|ACS48169.1| undecaprenyl pyrophosphate synthetase [Bifidobacterium animalis
subsp. lactis DSM 10140]
gi|289177385|gb|ADC84631.1| Omega-trans-poly-cis-decaprenyl diphosphate synthase
[Bifidobacterium animalis subsp. lactis BB-12]
gi|295794263|gb|ADG33798.1| undecaprenyl pyrophosphate synthetase [Bifidobacterium animalis
subsp. lactis V9]
Length = 263
Score = 164 bits (416), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 137/231 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+G+IMDGNGRWA RGL R GH+ V + +A A E G++ L+++ FS NW+R
Sbjct: 33 PRHVGVIMDGNGRWAQQRGLIRTDGHQAAEPVVFDTIAGAIEAGVRYLSLYTFSTENWKR 92
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + + + + + ++VR G R L ++ L+ A ++T+ N +
Sbjct: 93 SPQEVRFLMGFSRDIIHRRVAQMDEWGVRVRWSGRRPKLWKSVIDELEVAMERTKRNKVI 152
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
++ NY R EI+ A I +++ G + V +I+++L D+PD DL+IRT G
Sbjct: 153 DVVFCINYGGRAEIADAAAAIAREVRDGRIKGDRVTEKMISEHLYNPDIPDCDLVIRTSG 212
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E+R S+FL W+ AY+E F+PE +PD R + + ++++Y RDRRFGG+ K
Sbjct: 213 EQRTSNFLPWEAAYAELDFVPELFPDCGRVVLWGSIDRYIHRDRRFGGVKK 263
>gi|219685322|ref|ZP_03540141.1| undecaprenyl pyrophosphate synthetase 1 [Borrelia garinii Far04]
gi|219673095|gb|EED30115.1| undecaprenyl pyrophosphate synthetase 1 [Borrelia garinii Far04]
Length = 230
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 138/236 (58%), Gaps = 10/236 (4%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M +S P H+GIIMDGN RWA +GL G+ +G++ EIV + ++GIK L+ + FS
Sbjct: 1 MNKNSLPSHVGIIMDGNRRWALGKGLSSLEGYEEGLKRAKEIVKHSLKLGIKYLSFYVFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+R EI +L+ LI +L+ F KKN IK+ V G+ SL +++ +K++ +
Sbjct: 61 TENWKRDDCEIEKLMFLITHYLRAEFNFYKKNGIKIIVSGDVESLGEEVRSSIKDSVSFS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQ---DIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ L L +A NY R+EI RA++ D+ES ++ + + +LD ++PD
Sbjct: 121 KNFNNLILNLAINYGGRNEILRAVRKFVSSDFDLES-------LNENAFSNFLDNPELPD 173
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRTGG R+S+F LW++AYSE +F WP++ + L + LR R FG
Sbjct: 174 IDLLIRTGGNIRISNFFLWRIAYSELIFSNVLWPEYYDNRYSKDLECFQLRGRNFG 229
>gi|297796815|ref|XP_002866292.1| hypothetical protein ARALYDRAFT_919084 [Arabidopsis lyrata subsp.
lyrata]
gi|297312127|gb|EFH42551.1| hypothetical protein ARALYDRAFT_919084 [Arabidopsis lyrata subsp.
lyrata]
Length = 245
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 123/221 (55%), Gaps = 2/221 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +I+DGN RWA RGL GH G E +G +++FAFS NW R
Sbjct: 14 PKHVAVILDGNRRWAEKRGLGTSEGHEAGARRLLENAKDCFAMGTNTISLFAFSTENWER 73
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L + + +++ IK+ VIGNR + + + +++E E+ T+ G
Sbjct: 74 PEDEVKCLMALFEKHFRAEMPFFQRDKIKILVIGNRAKIPESLRGLIEEVEEATKSYEGK 133
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT--SDVPDPDLIIRT 188
NL IA +YS R +I +A K++ ++ G + D++ + K L T S+ P+PDL+IRT
Sbjct: 134 NLIIAIDYSGRFDILQACKSLATKVKDGLIQVEDINEEAMEKELLTKCSEFPNPDLLIRT 193
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQY 229
GE+R+S+F LWQ AY+E F WPDF + AL Y
Sbjct: 194 SGEQRISNFFLWQSAYTELYFPTVLWPDFGEAEYLEALTWY 234
>gi|289642683|ref|ZP_06474823.1| undecaprenyl diphosphate synthase [Frankia symbiont of Datisca
glomerata]
gi|289507513|gb|EFD28472.1| undecaprenyl diphosphate synthase [Frankia symbiont of Datisca
glomerata]
Length = 220
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 126/212 (59%)
Query: 28 RGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLK 87
RGLPR GH G + + V A E+G++ L+++AFS NW+R E++ L++
Sbjct: 2 RGLPRTKGHEAGEDALFDCVEGAIELGVRWLSVYAFSTENWKRSPDEVAFLMRFTDGVFG 61
Query: 88 KGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRA 147
+ + ++VR G R L +++ L+ AE++TR N L L + NY R E++ A
Sbjct: 62 RRIDDMDTLGVRVRWAGRRPRLWSNVIRRLETAEERTRGNDRLTLVMCVNYGGRAELADA 121
Query: 148 IKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEF 207
I +D+ G + +D + +A+YLD ++PD DL+IRT GE+RLS+FLLWQ AY+EF
Sbjct: 122 AAAIARDVRDGRLRPERIDENTLARYLDEPEMPDVDLLIRTSGEQRLSNFLLWQAAYAEF 181
Query: 208 VFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
VF+ WPDF R + A + RDRR+GG+
Sbjct: 182 VFVERLWPDFDRRDLWAACLDFAKRDRRYGGV 213
>gi|126466136|ref|YP_001041245.1| undecaprenyl pyrophosphate synthetase [Staphylothermus marinus F1]
gi|126014959|gb|ABN70337.1| Undecaprenyl pyrophosphate synthetase [Staphylothermus marinus F1]
Length = 269
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/241 (37%), Positives = 134/241 (55%), Gaps = 4/241 (1%)
Query: 1 MVASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
M+ + + P P HIGII DGN RWA G GH G + E++ E+ I+ +T
Sbjct: 28 MLWLQIKNGPFPVHIGIIPDGNRRWAKRSGFDPKQGHEYGYQRIKEVLKWIWELNIRYVT 87
Query: 60 IFAFSINN-WRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCV 116
++A S N RP+ E L ++K L++ + + I+V+V G + DI+ +
Sbjct: 88 VYAMSSENCLYRPLDEREHLFNIVKKGLQELMNMPDIHEKKIQVKVFGRLELVPKDIVEL 147
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT 176
K+ E+QT+ L IA Y R EI A++ I +D +SG + ++ ++YL T
Sbjct: 148 AKKIEEQTKDYREYRLNIALCYGGRQEILDAVRKIVKDAQSGKINPESINEETFSRYLYT 207
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
+ PDPDLIIRT GE R+S+FLLWQ AYSE F YWP+F + F+ A+ Y R+RR+
Sbjct: 208 NGCPDPDLIIRTSGEVRISNFLLWQSAYSELYFCEAYWPEFRKIDFWRAIRSYQRRERRY 267
Query: 237 G 237
G
Sbjct: 268 G 268
>gi|56807544|ref|ZP_00365467.1| COG0020: Undecaprenyl pyrophosphate synthase [Streptococcus
pyogenes M49 591]
Length = 187
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/184 (46%), Positives = 110/184 (59%), Gaps = 4/184 (2%)
Query: 58 LTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
LT++AFS NW RP E+S ++ L +F K L +NN+K+++IG L +D L L
Sbjct: 2 LTVYAFSTENWSRPQDEVSFIMNLPVTFFDKYVPVLHENNVKIQMIGETSRLPEDTLAAL 61
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
A D+T+ NTGL L A NY R EI+ A++ I QD+ + D+ LIA YL T
Sbjct: 62 NAAIDKTKRNTGLILNFALNYGGRAEITSAVRFIAQDVLDAKLNPGDITEDLIANYLMTD 121
Query: 178 DVP----DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
+P DPDLIIRT GE RLS+FL WQ AYSEF F P WPDF + A+ YN R
Sbjct: 122 HLPYLYRDPDLIIRTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKAELLKAIADYNRRQ 181
Query: 234 RRFG 237
RRFG
Sbjct: 182 RRFG 185
>gi|296271049|ref|YP_003653681.1| undecaprenyl diphosphate synthase [Thermobispora bispora DSM 43833]
gi|296093836|gb|ADG89788.1| undecaprenyl diphosphate synthase [Thermobispora bispora DSM 43833]
Length = 253
Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/238 (38%), Positives = 136/238 (57%), Gaps = 9/238 (3%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ S+ P H+G+I+DGN RWA A GL + GH+KG + +E++ EVG++ +T++
Sbjct: 19 LASAKIPRHVGVIVDGNRRWARAMGLSDVSRGHQKGADKISELLVWCKEVGVEIVTLWLL 78
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S +N RP SE+ L+++I++ + L + +G L D VLK A++
Sbjct: 79 STDNLGRPKSELESLLRVIENLV----MDLVAQGWHLNPMGALDLLPDHTARVLKYAKEA 134
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLDTSDV 179
T GL + +A Y R EI+ A++++ Q+ S ++ D IAK+L T
Sbjct: 135 TSDRPGLIVNVAVGYGGRREIADAVRSLLQEHASKGATIEELAEILDVEHIAKHLYTRGQ 194
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDPDL+IRT GE+RLS FLLWQ A+SEF F YWPDF + F AL Y R RR+G
Sbjct: 195 PDPDLVIRTSGEQRLSGFLLWQSAHSEFYFCEAYWPDFRKVDFLRALRSYAARHRRYG 252
>gi|296394228|ref|YP_003659112.1| undecaprenyl diphosphate synthase [Segniliparus rotundus DSM 44985]
gi|296181375|gb|ADG98281.1| undecaprenyl diphosphate synthase [Segniliparus rotundus DSM 44985]
Length = 257
Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 130/227 (57%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA RGLPR GH++G V ++V E+G+ L+ +AFS NW R
Sbjct: 29 PKHVALIMDGNGRWAQQRGLPRTEGHKRGEAVLMDLVHGCLELGVPWLSAYAFSTENWSR 88
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
SE++ L+ + +++ + + ++VR G R L ++ L+ A + T+ NT +
Sbjct: 89 SPSEVAFLMGFNRDVIRRRRDEMHELGVRVRWAGRRPRLWRSVIAELEAAMELTKDNTKM 148
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL + NY R E++ A I ++G + + + +L D+PD DL++R G
Sbjct: 149 NLVMCVNYGGRAELADAAAQIAALAKAGKANPDKITEAALRAFLYVPDMPDVDLMLRPSG 208
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+FLLWQ AY+E VF + +PD R + A +Y R+RRFG
Sbjct: 209 EMRVSNFLLWQGAYAELVFQDKLFPDIDRRDLWAACEEYASRNRRFG 255
>gi|294631153|ref|ZP_06709713.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. e14]
gi|292834486|gb|EFF92835.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. e14]
Length = 257
Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 128/233 (54%), Gaps = 9/233 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+IMDGN RWA A G GHR G + E + +E ++ +T++ S +N+ R
Sbjct: 29 PKHIGVIMDGNRRWAKASGSSTVHGHRAGADKIEEFLGWCSETDVEVVTLWLLSTDNFDR 88
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNN-IKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
P E+ L+ +I+ ++ SL + +V +G R L + LKEAE T G
Sbjct: 89 PQEELVPLLGIIEDVVR----SLAADGRWRVHHVGTRDLLPSGMQAALKEAEAATAEVDG 144
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSDVPDPDLI 185
+ + +A Y R EI+ A++++ D V D VD +I ++L T PDPDL+
Sbjct: 145 ILVNVAIGYGGRQEIADAVRSMLHDAHDRGVSMEDLAEAVDVDMIGRHLYTKAQPDPDLV 204
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
IRT GE+RLS F+LWQ A+SE+ F +WP F + F AL Y R RR+GG
Sbjct: 205 IRTSGEQRLSGFMLWQTAHSEYYFCEVFWPAFRKVDFLRALRDYAARHRRYGG 257
>gi|226320688|ref|ZP_03796246.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia burgdorferi
29805]
gi|226233904|gb|EEH32627.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia burgdorferi
29805]
Length = 230
Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/236 (38%), Positives = 136/236 (57%), Gaps = 10/236 (4%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M S P H+GIIMDGN RWA +GL G+++G++ EIV + VGIK L+ + FS
Sbjct: 1 MNKGSLPSHVGIIMDGNRRWALGKGLSSLEGYKEGLKRAKEIVKYSLRVGIKYLSFYVFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRR EI L+ LI ++L+ F +KN IK+ V G+ SL ++ +K++ +
Sbjct: 61 TENWRRDDCEIENLMFLIANYLRAEFDFYEKNGIKIIVSGDVESLSGEVKSSIKDSISFS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQ---DIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ L L +A NY R+EI RA+K D+ES ++ ++ + +LD ++PD
Sbjct: 121 KNFNNLILNLAINYGGRNEILRAVKKFVSSDFDLES-------LNENIFSSFLDNPELPD 173
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRTGG R+S+F LW++AYSE +F WP++ + L + R R FG
Sbjct: 174 LDLLIRTGGNIRISNFFLWRIAYSELIFSNVLWPEYYDTRYSKDLECFQFRRRNFG 229
>gi|318057623|ref|ZP_07976346.1| undecaprenyl pyrophosphate synthase [Streptomyces sp. SA3_actG]
gi|318080077|ref|ZP_07987409.1| undecaprenyl pyrophosphate synthase [Streptomyces sp. SA3_actF]
Length = 253
Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 128/232 (55%), Gaps = 7/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+I+DGN RWA A G GHR G E E + AE ++ +T++ S +N+ R
Sbjct: 25 PKHIGLILDGNRRWARASGGTTAQGHRAGAEKIEEFLGWCAETDVEVVTLWMLSTDNFDR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE+ L+ +I+ ++ +V +G L D+ LKEAE T NTG+
Sbjct: 85 PESELVPLLGIIEDSVRA---LAADGRWRVHHVGALDILPDNTRTTLKEAEAATSDNTGI 141
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVC----SHDVDSSLIAKYLDTSDVPDPDLII 186
+ +A Y R EI+ A++++ D + VD LI+++L T PDPDL+I
Sbjct: 142 LVNVAVGYGGRQEIADAVRSLLHDAARKGTSFEELAEAVDIDLISEHLYTRGQPDPDLVI 201
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
RT GE+RLS F+LWQ A+SE+ F +WP F + F A+ Y R RR+GG
Sbjct: 202 RTSGEQRLSGFMLWQSAHSEYYFCEVFWPAFRKVDFLRAMRDYAARHRRYGG 253
>gi|239979665|ref|ZP_04702189.1| putative undecaprenyl diphosphate synthase [Streptomyces albus
J1074]
gi|291451530|ref|ZP_06590920.1| undecaprenyl pyrophosphate synthetase 1 [Streptomyces albus J1074]
gi|291354479|gb|EFE81381.1| undecaprenyl pyrophosphate synthetase 1 [Streptomyces albus J1074]
Length = 253
Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 133/232 (57%), Gaps = 7/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+I+DGN RWA A G GHR G + E + AE ++ +T++ S +N+ R
Sbjct: 25 PGHIGVILDGNRRWAKASGGTTAQGHRAGADKITEFLGWCAETKVRVVTLWMLSTDNFDR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE++ L+ +I+ ++ G + +V +G L D VLKEAE+ T N G+
Sbjct: 85 PESELTPLLGIIEDSVR-GLAA--DGRWRVHHVGTLDMLPDRTRTVLKEAEEATAANQGI 141
Query: 131 NLFIAFNYSSRDEISRAIKNIFQD-IESGSV---CSHDVDSSLIAKYLDTSDVPDPDLII 186
+ +A Y R EI+ A++++ D E G+ + V I+++L T PDPDL+I
Sbjct: 142 LVNVAVGYGGRQEIADAVRSLLLDHAERGTSFEELAETVSIDSISEHLYTRGQPDPDLVI 201
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
RT GE+RLS F+LWQ A+SE+ F +WP F + F AL Y R+RRFGG
Sbjct: 202 RTSGEQRLSGFMLWQSAHSEYYFCEVFWPAFRKVDFLRALRDYAYRNRRFGG 253
>gi|224533974|ref|ZP_03674558.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia burgdorferi
CA-11.2a]
gi|224512810|gb|EEF83177.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia burgdorferi
CA-11.2a]
Length = 230
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/236 (38%), Positives = 136/236 (57%), Gaps = 10/236 (4%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M S P H+GIIMDGN RWA +GL G+++G++ EIV + VGIK L+ + FS
Sbjct: 1 MNKGSLPSHVGIIMDGNRRWALGKGLSSLEGYKEGLKRAKEIVKYSLRVGIKYLSFYVFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRR EI L+ LI ++L+ F +KN IK+ V G+ SL ++ +K++ +
Sbjct: 61 TENWRRDDCEIENLMFLIANYLRAEFDFYEKNGIKIIVSGDIESLSGEVKSSIKDSISFS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQ---DIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ L L +A NY R+EI RA+K D+ES ++ ++ + +LD ++PD
Sbjct: 121 KNFNNLILNLAINYGGRNEILRAVKKFVSSDFDLES-------LNENIFSSFLDNPELPD 173
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRTGG R+S+F LW++AYSE +F WP++ + L + R R FG
Sbjct: 174 LDLLIRTGGNIRISNFFLWRIAYSELIFSNVLWPEYYDTRYSKDLECFQFRRRNFG 229
>gi|256833106|ref|YP_003161833.1| undecaprenyl diphosphate synthase [Jonesia denitrificans DSM 20603]
gi|256686637|gb|ACV09530.1| undecaprenyl diphosphate synthase [Jonesia denitrificans DSM 20603]
Length = 259
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 132/231 (57%), Gaps = 7/231 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+G+I+DGN RWA + G P GHR+G + + + + E+G++ +T++ S +N R
Sbjct: 31 PRHVGVILDGNRRWAKSFGEPAATGHRRGADKIADFLTWSEELGVEVVTLWMLSTDNLHR 90
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ +I +++ + ++RV+G L DD+ L+ E+ TR GL
Sbjct: 91 PAEELHALLSIISDAVRE---LANEGRWRLRVVGKLDLLPDDLARDLRRYEESTRHIDGL 147
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDVPDPDLII 186
++ +A Y R EI+ A+K++ + + D S + IA +L T PDP+L+I
Sbjct: 148 HVNVAIGYGGRHEIADAVKSLLHTYDEQGLSLADAMSRMCVDDIANHLYTKGQPDPELVI 207
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE+RL FLLWQ A+SEF F +WPDF R + AL ++ R+RR G
Sbjct: 208 RTSGEQRLGGFLLWQSAHSEFYFCEAFWPDFRRVDYLRALRAFSTRERRLG 258
>gi|302521651|ref|ZP_07273993.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. SPB78]
gi|302430546|gb|EFL02362.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. SPB78]
Length = 256
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 128/232 (55%), Gaps = 7/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+I+DGN RWA A G GHR G E E + AE ++ +T++ S +N+ R
Sbjct: 28 PKHIGLILDGNRRWARASGGTTAQGHRAGAEKIEEFLGWCAETDVEVVTLWMLSTDNFDR 87
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE+ L+ +I+ ++ +V +G L D+ LKEAE T NTG+
Sbjct: 88 PESELVPLLGIIEDSVRA---LAADGRWRVHHVGALDILPDNTRTTLKEAEAATSDNTGI 144
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVC----SHDVDSSLIAKYLDTSDVPDPDLII 186
+ +A Y R EI+ A++++ D + VD LI+++L T PDPDL+I
Sbjct: 145 LVNVAVGYGGRQEIADAVRSLLHDAARKGTSFEELAEAVDIDLISEHLYTRGQPDPDLVI 204
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
RT GE+RLS F+LWQ A+SE+ F +WP F + F A+ Y R RR+GG
Sbjct: 205 RTSGEQRLSGFMLWQSAHSEYYFCEVFWPAFRKVDFLRAMRDYAARHRRYGG 256
>gi|291299551|ref|YP_003510829.1| undecaprenyl diphosphate synthase [Stackebrandtia nassauensis DSM
44728]
gi|290568771|gb|ADD41736.1| undecaprenyl diphosphate synthase [Stackebrandtia nassauensis DSM
44728]
Length = 262
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 122/228 (53%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ + MDGNGRWA RGLPR GH G + + A E+GI L+ +AFS NWRR
Sbjct: 27 PKHVAVTMDGNGRWAKQRGLPRTDGHAAGEASLFDTIEGAIELGISTLSAYAFSTENWRR 86
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + + + L +++R G R L ++ L+ A++ ++ N +
Sbjct: 87 SPDEVRWLMGFNRDVIHRRRDELNAMGVRIRWAGRRPKLWRSVIKELEIAQEMSKHNDKI 146
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L NY R EIS A I +D +G + V +AKYL D+PD DL +R G
Sbjct: 147 TLQFCVNYGGRAEISDAAAAIARDAAAGKLNPDKVSEKTVAKYLYNPDLPDVDLFLRPSG 206
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S+FL WQ Y+E VF WPDF R +HA Y RDRR+GG
Sbjct: 207 EQRTSNFLPWQATYAELVFQDVLWPDFDRRHLWHACEVYASRDRRYGG 254
>gi|218661291|ref|ZP_03517221.1| undecaprenyl pyrophosphate synthetase protein [Rhizobium etli
IE4771]
Length = 214
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/211 (43%), Positives = 130/211 (61%), Gaps = 10/211 (4%)
Query: 38 KGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNN 97
KG+E E V AA GIK LT+FAFS NWRRP +E+S+L+ L+K+F+++ L + N
Sbjct: 1 KGVEAVRETVRAAGAAGIKYLTLFAFSSENWRRPEAEVSDLLGLLKAFIRRDLAELHRQN 60
Query: 98 IKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIES 157
+++RVIG+R SL DIL +L EAE+ T+ NT L L IAFNY SRDEISRA+ ++ +D+E+
Sbjct: 61 VRIRVIGDRHSLRSDILGLLLEAEETTKDNTALTLVIAFNYGSRDEISRAVVSLAKDVEA 120
Query: 158 GSVCSHDVDSSLIAKYLDTSDVP-----DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPE 212
G + + D+ +LI LDT P PD R G + S + + S F+PE
Sbjct: 121 GRLRAQDITPALIDARLDTGGHPRSGSHHPDQ--RRGAAFQFSCWGRPPIRNS--FFVPE 176
Query: 213 YWPDFSR-ELFFHALNQYNLRDRRFGGLSKK 242
YW F + F AL ++ RD+RFG ++
Sbjct: 177 YWAGFQPGKSFRSALEKFASRDKRFGRACRR 207
>gi|325913950|ref|ZP_08176306.1| Undecaprenyl pyrophosphate synthetase [Xanthomonas vesicatoria ATCC
35937]
gi|325539719|gb|EGD11359.1| Undecaprenyl pyrophosphate synthetase [Xanthomonas vesicatoria ATCC
35937]
Length = 236
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/225 (39%), Positives = 127/225 (56%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA R PR GHR G N + E G+ LT+FAFS NW RP E+
Sbjct: 1 MDGNGRWAQRRRRPRMIGHRAGARAVNRTIDFCLEKGVSALTLFAFSSENWGRPQEEVDA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+KL L +G L++ ++VR IG R + + AE T N L L IA +
Sbjct: 61 LMKLFLHALDRGVEELQRRGVQVRFIGERSRFATPLRERMATAERITAGNARLVLSIAAS 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I+ A + + +++ +G + +D +L++ + SD+P PDL IRTGG+ R+S+F
Sbjct: 121 YGGRQDIALAARALAEEVAAGRLQPQQIDEALLSSRVALSDLPAPDLFIRTGGDTRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
LLWQ+AY+E F WP+F + AL+ Y R+RRFG S +
Sbjct: 181 LLWQLAYTELWFTETLWPEFDAGVLQQALDDYAGRERRFGLTSAQ 225
>gi|166712736|ref|ZP_02243943.1| undecaprenyl pyrophosphate synthetase [Xanthomonas oryzae pv.
oryzicola BLS256]
Length = 236
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 125/220 (56%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA R PR GHR G N + E G+ LT+FAFS NW RP E+
Sbjct: 1 MDGNGRWAQRRRRPRVIGHRAGARAVNRTIDFCLEKGVSALTLFAFSSENWGRPRDEVDA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+KL L + L++ ++VR IG+R + + AE T N L L IA +
Sbjct: 61 LMKLFLHALDREVGELQRRGVQVRFIGDRSRFAAPLRDRMAGAERSTAANARLVLSIAAS 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I+ A + + +D+ +G + +D +L++ + +D+P PDL IRTGG+ R+S+F
Sbjct: 121 YGGRQDIAAAARALAEDVAAGRLQPEQIDEALLSSRVALADLPAPDLFIRTGGDTRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
LLWQ+AY+E F WP+F + AL+ Y R+RRFG
Sbjct: 181 LLWQLAYTELWFTETLWPEFDAGVLQQALDDYAGRERRFG 220
>gi|221217429|ref|ZP_03588900.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia burgdorferi
72a]
gi|225549869|ref|ZP_03770831.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia burgdorferi
118a]
gi|221192707|gb|EEE18923.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia burgdorferi
72a]
gi|225369560|gb|EEG99011.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia burgdorferi
118a]
Length = 230
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/236 (38%), Positives = 136/236 (57%), Gaps = 10/236 (4%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M S P H+GIIMDGN RWA +GL G+++G++ EIV + VGIK L+ + FS
Sbjct: 1 MNKGSLPSHVGIIMDGNRRWALGKGLSSLEGYKEGLKRAKEIVKYSLRVGIKCLSFYVFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRR EI L+ LI ++L+ F +KN IK+ V G+ SL ++ +K++ +
Sbjct: 61 TENWRRDDCEIENLMFLIANYLRAEFDFYEKNGIKIIVSGDIESLSGEVKSSIKDSISFS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQ---DIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ L L +A NY R+EI RA+K D+ES ++ ++ + +LD ++PD
Sbjct: 121 KNFNNLILNLAINYGGRNEILRAVKKFVSSDFDLES-------LNENIFSSFLDNPELPD 173
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRTGG R+S+F LW++AYSE +F WP++ + L + R R FG
Sbjct: 174 LDLLIRTGGNIRISNFFLWRIAYSELIFSNVLWPEYYDTRYSKDLECFQFRRRNFG 229
>gi|254468133|ref|ZP_05081539.1| undecaprenyl pyrophosphate synthetase 1 [beta proteobacterium KB13]
gi|207086943|gb|EDZ64226.1| undecaprenyl pyrophosphate synthetase 1 [beta proteobacterium KB13]
Length = 229
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 129/230 (56%), Gaps = 7/230 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R LPR GH +G++ ++I + G+K+L+++AFS NW R
Sbjct: 7 PHHVAIIMDGNGRWAKNRNLPRNNGHEEGLKTLSKITPKVFDAGVKSLSVYAFSSENWYR 66
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +EI L+ L + ++ F + N IK ++GN + +K E+ T+ N
Sbjct: 67 PKNEIKHLMDLFEKAIESNFQYMVDNRIKFNLLGNIKKFPSSLQKKIKNLEEITKKNRDY 126
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
N ++A NY S++E+ A + + + + ++ A +L PD DL+IRTGG
Sbjct: 127 NFYLAANYGSKEELIFAAETLRDS--TSKITEKSFKNAFYAPHL-----PDVDLLIRTGG 179
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E RLS+FLLWQ AY+E F WPDF AL ++ + R+FG ++
Sbjct: 180 ETRLSNFLLWQSAYAEIYFTKVLWPDFKPIHLKKALEFFSGKIRKFGKIN 229
>gi|332295555|ref|YP_004437478.1| Undecaprenyl pyrophosphate synthase [Thermodesulfobium narugense
DSM 14796]
gi|332178658|gb|AEE14347.1| Undecaprenyl pyrophosphate synthase [Thermodesulfobium narugense
DSM 14796]
Length = 227
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 131/230 (56%), Gaps = 7/230 (3%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S +HI IIMDGN RW+ AR LP GH +G + E+V E I L+++AFS NW
Sbjct: 2 SKINHIAIIMDGNARWSKARFLPVFNGHFEGFKKLQEMVNIFTEKNIPYLSVYAFSTENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP EI + K+ ++K K +K++ + +L +DIL +++ +E
Sbjct: 62 KRPKEEIEGIFKIFYDGIEKYIEDWSKKGVKLKFFTLKENLSNDILKLIETSEKVEVNPV 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+NL +AFNY SR EI I + + + +K L T P+PD++IRT
Sbjct: 122 KVNLGVAFNYGSRKEILYTANKI-------KSLNIEFNEENFSKLLLTYPFPEPDILIRT 174
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GGEKR+S+F LWQ+AY+E F+ + WPDF+++ + + +++ R RRFGG
Sbjct: 175 GGEKRISNFFLWQIAYTELFFVDKLWPDFTKDDLDNIIAEFHKRQRRFGG 224
>gi|183221972|ref|YP_001839968.1| undecaprenyl pyrophosphate synthase [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
gi|189912040|ref|YP_001963595.1| undecaprenyl pyrophosphate synthase [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167776716|gb|ABZ95017.1| Undecaprenyl pyrophosphate synthase [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167780394|gb|ABZ98692.1| Undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) [Leptospira
biflexa serovar Patoc strain 'Patoc 1 (Paris)']
Length = 237
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 127/239 (53%), Gaps = 7/239 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M + P HI +IMDGNGRWA +G R GHR+G + ++ A E I N++++AFS
Sbjct: 1 MKLHTIPAHIAVIMDGNGRWAENQGKKRTEGHREGANAIDRLLDVALEYKIPNISLYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP++EI + L+ F++ ++ I++ G R L +L + A T
Sbjct: 61 TENWKRPITEIQAIFGLLVEFIETRLDTIHAKGIRIHHSGARNKLSKTVLKKIDHAMAVT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDVP 180
+ N L NY +EI + N + + + +D + KYL TS +P
Sbjct: 121 KKNKKLTANFCLNYGGHEEI---LSNFSRVMAARKAKKETLDKPISPKEFEKYLYTSPLP 177
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DL+IRT GE+R+S+FLLWQ AY+E F WPDF R AL ++ R R+FGGL
Sbjct: 178 PVDLLIRTAGEQRISNFLLWQSAYAEMYFTSTLWPDFGRTSLEEALLFFDSRKRKFGGL 236
>gi|295836755|ref|ZP_06823688.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. SPB74]
gi|197697631|gb|EDY44564.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. SPB74]
Length = 256
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 128/232 (55%), Gaps = 7/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+I+DGN RWA A G GHR G E E + AE ++ +T++ S +N+ R
Sbjct: 28 PKHIGLILDGNRRWARASGGTTAQGHRAGAEKIEEFLGWCAETDVEVVTLWMLSTDNFDR 87
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE+ L+ +I+ ++ +V +G L D+ LKEAE T NTG+
Sbjct: 88 PESELIPLLGIIEDSVRA---LAADGRWRVHHVGALDILPDNTRTTLKEAEAATSDNTGI 144
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVC----SHDVDSSLIAKYLDTSDVPDPDLII 186
+ +A Y R EI+ A++++ D + VD LI+++L T PDPDL+I
Sbjct: 145 LVNVAVGYGGRQEIADAVRSLLHDAARKGTSFEELAEAVDIDLISEHLYTRGQPDPDLVI 204
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
RT GE+RLS F+LWQ A+SE+ F +WP F + F A+ Y R RR+GG
Sbjct: 205 RTSGEQRLSGFMLWQSAHSEYYFCEVFWPAFRKVDFLRAMRDYAARHRRYGG 256
>gi|322967614|sp|B8XA40|ZFPS_SOLHA RecName: Full=(2Z,6Z)-farnesyl diphosphate synthase, chloroplastic;
AltName: Full=Z,Z-FPP synthase; AltName:
Full=Z,Z-farnesyl pyrophosphate synthase; Flags:
Precursor
gi|212727255|gb|ACJ38408.1| Z,Z-farnesyl pyrophosphate synthase [Solanum habrochaites]
Length = 303
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 132/228 (57%), Gaps = 5/228 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGN RWA +GL GH+ EI ++++GI+ +T FAFS NW+R
Sbjct: 78 PKHIALIMDGNRRWAKDKGLDVSEGHKHLFPKLKEICDISSKLGIQVITAFAFSTENWKR 137
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+++ + + ++ ++V +IG + L + + E+ T+ N GL
Sbjct: 138 AKGEVDFLMQMFEEL----YDEFSRSGVRVSIIGCKTDLPMTLQKCIALTEETTKGNKGL 193
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L IA NY +I +A K+I +G + D++ +L + L+ S P+PDL+IRTGG
Sbjct: 194 HLVIALNYGGYYDILQATKSIVNKAMNGLLDVEDINKNLFDQELE-SKCPNPDLLIRTGG 252
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
++R+S+FLLWQ+AY+EF F +PDF E A+ + R RRFGG
Sbjct: 253 DQRVSNFLLWQLAYTEFYFTKTLFPDFGEEDLKEAIINFQQRHRRFGG 300
>gi|20094204|ref|NP_614051.1| undecaprenyl pyrophosphate synthase [Methanopyrus kandleri AV19]
gi|42559839|sp|Q8TXA7|UPPS_METKA RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|19887226|gb|AAM01981.1| Undecaprenyl pyrophosphate synthase [Methanopyrus kandleri AV19]
Length = 271
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/229 (36%), Positives = 128/229 (55%), Gaps = 2/229 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+GIIMDGN R+A GL GHR G + +++ ++G+K +T++A S N R
Sbjct: 42 PEHVGIIMDGNRRFARELGLEPWEGHRYGADKLEDVLEWCLDLGVKAVTVYALSTENLNR 101
Query: 71 PVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
P E+ L L++ K S + + + VR +G L + +K+AE T+
Sbjct: 102 PKEELKRLFDLMEERFKALAESERIHRRKVAVRAVGRLHLLPTRVRRAIKKAERATKEYK 161
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
L +A Y R EI A++ I D++ G + ++D KY+ D+PDP+LIIRT
Sbjct: 162 DRFLNVAVAYGGRQEIIDAVREIAHDVKVGRLDPDEIDEGTFRKYVYVGDLPDPELIIRT 221
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
GE+RLS+FLLW AYSE F+ YWP+F + A+ ++ R+RRFG
Sbjct: 222 SGEERLSNFLLWYSAYSELYFVDVYWPEFRKIDLLRAIREFQKRERRFG 270
>gi|217034076|ref|ZP_03439497.1| hypothetical protein HP9810_893g23 [Helicobacter pylori 98-10]
gi|216943471|gb|EEC22925.1| hypothetical protein HP9810_893g23 [Helicobacter pylori 98-10]
Length = 223
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/222 (36%), Positives = 132/222 (59%), Gaps = 1/222 (0%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP SE+
Sbjct: 1 MDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPKSEVDF 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+K++K +LK + N+I+ + IG+ ++ + + E+ TR +A N
Sbjct: 61 LMKMLKKYLKDEHSTYLDNHIRFKAIGDLEGFSKELRETILKLENDTRHFKDFTQVLALN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y S++E+SRA K++ + S +++ I+ LDT ++P+ DL++RTGGE RLS+F
Sbjct: 121 YGSKNELSRAFKSLLESPPSNISLLESLENE-ISNRLDTRNLPEVDLLLRTGGEMRLSNF 179
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
LLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 180 LLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 221
>gi|67459048|ref|YP_246672.1| undecaprenyl pyrophosphate synthetase [Rickettsia felis URRWXCal2]
gi|73920273|sp|Q4ULR6|UPPS_RICFE RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|67004581|gb|AAY61507.1| Undecaprenyl pyrophosphate synthetase [Rickettsia felis URRWXCal2]
Length = 235
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/225 (38%), Positives = 126/225 (56%), Gaps = 6/225 (2%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGN RWA L + GH+ G + E++ + I +T++ FS NW+R
Sbjct: 15 HLAIIMDGNARWADQHNLTKSEGHKAGADKIRELLPEFINLNIPYITLYTFSSENWQRSS 74
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+E+ L+KL+ + K SL KN +K++VIG L + + A + T+ N + L
Sbjct: 75 TEVDFLIKLLSIYFKNELNSLHKNGVKIKVIGRLNLLSSSLQKQINNAIELTKNNNKITL 134
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IAF+Y SR EI A I I SG ++ S I L ++PD DL+IR GG
Sbjct: 135 CIAFSYGSRQEIVDACTKI---IASG---KKEISESDIGHALYDPEMPDVDLLIRPGGVY 188
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
R+S+FLLWQ AY+E F P+YWP F+++ A+N Y+ R R FG
Sbjct: 189 RISNFLLWQAAYAELYFSPKYWPAFNKDDIIEAINDYSKRKRTFG 233
>gi|15678260|ref|NP_275375.1| hypothetical protein MTH232 [Methanothermobacter thermautotrophicus
str. Delta H]
gi|6136144|sp|O26334|UPPS_METTH RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|2621280|gb|AAB84738.1| conserved protein [Methanothermobacter thermautotrophicus str.
Delta H]
Length = 255
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 132/230 (57%), Gaps = 3/230 (1%)
Query: 11 PDHIGIIMDGNGRWAAARG-LPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IIMDGN R++ +G + GH+KGIE +++ ++GI+ +T +AFS N++
Sbjct: 25 PRHVAIIMDGNRRYSKLQGSMNPIEGHKKGIETLEKVLDWCVDLGIEIVTAYAFSTENFK 84
Query: 70 RPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
RP E+ L+KL + + + KN ++VR +G L +D+ ++ AE T
Sbjct: 85 RPEKEVKGLMKLFRENFEAIASNEKIHKNRVRVRAVGKLELLPEDVRRAIEIAEKSTEQY 144
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+ + IA Y R EI A + I +D+++G + D+D +I + L T+ + DP LIIR
Sbjct: 145 SDRLVNIAIGYDGRQEIVDATRKIAEDVKAGLIDPEDIDEDMINRNLYTAGLEDPHLIIR 204
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
T GE+RLS FLLWQ +YSE F WP+ + F A+ Y R+RRFG
Sbjct: 205 TSGEERLSGFLLWQSSYSELYFCDSLWPELRKVDFLRAIRSYQQRERRFG 254
>gi|157964508|ref|YP_001499332.1| undecaprenyl pyrophosphate synthetase [Rickettsia massiliae MTU5]
gi|157844284|gb|ABV84785.1| Undecaprenyl pyrophosphate synthetase [Rickettsia massiliae MTU5]
Length = 235
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 88/225 (39%), Positives = 127/225 (56%), Gaps = 6/225 (2%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGN RWA + + GH+ G + E++ + I +T++ FS NW+R
Sbjct: 15 HLAIIMDGNARWADRHNVTKSEGHKAGADKIRELLPEFINLNIPYITLYTFSSENWQRSS 74
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+E+ L+KL+ +LK +L KN +K++VIG L + + A + T+ N + L
Sbjct: 75 TEVDFLIKLLSIYLKTELNTLHKNGVKLKVIGRLNLLSIALQKQINNAIELTKNNNKITL 134
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IAF+Y SR EI A I I SG D D I L ++PD DL+IR GG
Sbjct: 135 CIAFSYGSRQEIVDACTTI---ITSGKKAVSDSD---IQHALYDPEMPDVDLLIRPGGVY 188
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
R+S+FLLWQ AY+E F P+YWPDF+++ A+N Y+ R R FG
Sbjct: 189 RISNFLLWQAAYAELYFSPKYWPDFNKDDIQEAINDYSKRKRTFG 233
>gi|225552268|ref|ZP_03773208.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia sp. SV1]
gi|225371266|gb|EEH00696.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia sp. SV1]
Length = 230
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 90/236 (38%), Positives = 136/236 (57%), Gaps = 10/236 (4%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M S P H+GIIMDGN RWA +GL G+++G++ EIV + VGIK L+ + FS
Sbjct: 1 MNKGSLPSHVGIIMDGNRRWALGKGLSFLEGYKEGLKRAKEIVKYSLRVGIKYLSFYVFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRR EI L+ LI ++L+ F +KN IK+ V G+ SL ++ +K++ +
Sbjct: 61 TENWRRDDCEIENLMFLIANYLRAEFDFYEKNGIKIIVSGDVESLSREVKSSIKDSISFS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQ---DIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ L L +A NY R+EI RA+K D+ES ++ ++ + +LD ++PD
Sbjct: 121 KNFNNLILNLAINYGGRNEILRAVKKFVSSDFDLES-------LNENIFSSFLDNPELPD 173
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRTGG R+S+F LW++AYSE +F WP++ + L + R R FG
Sbjct: 174 LDLLIRTGGNIRISNFFLWRIAYSELIFSNVLWPEYYDTRYSKDLECFQFRRRNFG 229
>gi|16081653|ref|NP_394020.1| hypothetical protein Ta0546 [Thermoplasma acidophilum DSM 1728]
gi|42560012|sp|Q9HKQ0|UPPS_THEAC RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|10639714|emb|CAC11686.1| conserved hypothetical protein [Thermoplasma acidophilum]
Length = 258
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/231 (41%), Positives = 126/231 (54%), Gaps = 6/231 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGII DGN R+A G+ GH KG E E+V E+ I+ +T +AFS N+RR
Sbjct: 29 PRHIGIITDGNRRYARNVGISENEGHVKGKEKVEEVVDWCMELDIRIVTFYAFSTENFRR 88
Query: 71 PVSEISELVKLI----KSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
E+ L LI KS LK + KN I V+VIGN L + + E+ T+
Sbjct: 89 SPEEVDFLFHLIDNAFKSLLKDE--RVYKNRINVKVIGNLSILPAYLRQTIHIVEETTKN 146
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
L +A Y R+EI AIK I +D G + ++D YL +PDPDLI+
Sbjct: 147 FNNYQLNLAIGYGGREEILDAIKRITRDAMDGKLNIDELDEEKFRMYLYDGRIPDPDLIL 206
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE+R+S+FLLWQ AYSE F YWP+FS+ F A+ Y R RRFG
Sbjct: 207 RTSGEERISNFLLWQSAYSELYFSDVYWPEFSKLDFLRAIYSYQRRQRRFG 257
>gi|190570532|ref|YP_001974890.1| undecaprenyl diphosphate synthase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213019290|ref|ZP_03335097.1| undecaprenyl diphosphate synthase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|190356804|emb|CAQ54169.1| undecaprenyl diphosphate synthase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995399|gb|EEB56040.1| undecaprenyl diphosphate synthase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 231
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/239 (40%), Positives = 129/239 (53%), Gaps = 22/239 (9%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P H+ IIMDGNGRWA +G + G+RKG EV +I + I LT++AFS+ N
Sbjct: 5 ESLPKHLAIIMDGNGRWANNQGRVKIDGYRKGSEVAFDIAKHCTVLAIPYLTLYAFSMEN 64
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKN---------NIKVRVIGNRLSLDDDILCVLK 118
W R +E L L +Y+L NIK+ IGN L I +K
Sbjct: 65 WLRSENETDYLFNLF-------YYTLTNEDKMKFIYNCNIKLNFIGNLSLLPSKIFDQIK 117
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
+AE+ T N GL L +A +Y ++ EI AI N+ I+ C V K+L T D
Sbjct: 118 KAEEVTHKNDGLLLTVAVSYGAKQEIIHAINNV---IKGNIDC---VLEEEFEKFLYTKD 171
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+P DL+IRTGGEKRLS+FLLWQ AY+E F WPDFS + AL Y R++++G
Sbjct: 172 LPKLDLLIRTGGEKRLSNFLLWQAAYAELYFCDTLWPDFSCQDLTKALEDYTKREKKYG 230
>gi|216264536|ref|ZP_03436528.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia burgdorferi
156a]
gi|215981009|gb|EEC21816.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia burgdorferi
156a]
Length = 230
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 136/236 (57%), Gaps = 10/236 (4%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M S P H+GIIMDGN RWA +GL G+++G++ EIV + VGIK L+ + FS
Sbjct: 1 MNKGSLPSHVGIIMDGNRRWALGKGLASLEGYKEGLKRAKEIVKYSLRVGIKYLSFYVFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+R EI L+ LI ++L+ F +KN IK+ V G+ SL ++ +K++ +
Sbjct: 61 TENWKRDDCEIENLMFLIANYLRAEFDFYEKNGIKIIVSGDVESLSGEVKSSIKDSISFS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQ---DIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ L L +A NY R+EI RA+K D+ES ++ ++ + +LD ++PD
Sbjct: 121 KNFNNLILNLAINYGGRNEILRAVKKFVSSDFDLES-------LNENIFSSFLDNPELPD 173
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRTGG R+S+F LW++AYSE +F WP++ + L + R R FG
Sbjct: 174 LDLLIRTGGNIRISNFFLWRIAYSELIFSNVLWPEYYDTRYSKDLECFQFRRRNFG 229
>gi|195941858|ref|ZP_03087240.1| hypothetical protein Bbur8_03114 [Borrelia burgdorferi 80a]
gi|312148528|gb|ADQ31187.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia burgdorferi
JD1]
gi|312149673|gb|ADQ29744.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia burgdorferi
N40]
Length = 230
Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 136/236 (57%), Gaps = 10/236 (4%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M S P H+GIIMDGN RWA +GL G+++G++ EIV + VGIK L+ + FS
Sbjct: 1 MNKGSLPSHVGIIMDGNRRWALGKGLSSLEGYKEGLKRAKEIVKYSLRVGIKYLSFYVFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+R EI L+ LI ++L+ F +KN IK+ V G+ SL ++ +K++ +
Sbjct: 61 TENWKRDDCEIENLMFLIANYLRAEFDFYEKNGIKIIVSGDVESLSGEVKSSIKDSISFS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQ---DIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ L L +A NY R+EI RA+K D+ES ++ ++ + +LD ++PD
Sbjct: 121 KNFNNLILNLAINYGGRNEILRAVKKFVSSDFDLES-------LNENIFSSFLDNPELPD 173
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRTGG R+S+F LW++AYSE +F WP++ + L + R R FG
Sbjct: 174 LDLLIRTGGNIRISNFFLWRIAYSELIFSNVLWPEYYDTRYSKDLECFQFRRRNFG 229
>gi|304314442|ref|YP_003849589.1| undecaprenyl pyrophosphate synthase [Methanothermobacter
marburgensis str. Marburg]
gi|302587901|gb|ADL58276.1| predicted undecaprenyl pyrophosphate synthase [Methanothermobacter
marburgensis str. Marburg]
Length = 255
Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/230 (37%), Positives = 132/230 (57%), Gaps = 3/230 (1%)
Query: 11 PDHIGIIMDGNGRWAAARG-LPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IIMDGN R++ +G + GH+KGIE +++ ++GI+ +T +AFS N++
Sbjct: 25 PRHVAIIMDGNRRYSRLQGSVDPIEGHKKGIETLEKVLDWCVDLGIEIITAYAFSTENFK 84
Query: 70 RPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
RP +E+ L+KL K + + KN +KV+ +G L +D+ ++ AE T
Sbjct: 85 RPENEVKGLMKLFKENFEAIASNKKIHKNRVKVKAVGKLELLPEDVRKAIEVAERSTEGY 144
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+ + IA Y R EI A + I +D+ +G + D+D +I + L T+ + DP LIIR
Sbjct: 145 SDRLVNIAIGYDGRQEILDAARKIAEDVRAGRIDPEDIDEDMINRNLYTAGLEDPHLIIR 204
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
T GE+RLS FLLWQ +YSE F WP+ + F A+ Y R+RRFG
Sbjct: 205 TSGEERLSGFLLWQSSYSELYFCDSLWPELRKVDFLRAIRSYQQRERRFG 254
>gi|224532924|ref|ZP_03673534.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia burgdorferi
WI91-23]
gi|224512123|gb|EEF82514.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia burgdorferi
WI91-23]
Length = 230
Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 136/236 (57%), Gaps = 10/236 (4%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M S P H+GIIMDGN RWA +GL G+++G++ EIV + VGIK L+ + FS
Sbjct: 1 MNKGSLPSHVGIIMDGNRRWALGKGLSSLEGYKEGLKRAKEIVKYSLRVGIKYLSFYVFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+R EI L+ LI ++L+ F +KN IK+ V G+ SL ++ +K++ +
Sbjct: 61 TENWKRDDCEIENLMFLIANYLRAEFDFYEKNGIKIIVSGDVESLSGEVKSSIKDSISFS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQ---DIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ L L +A NY R+EI RA+K D+ES ++ ++ + +LD ++PD
Sbjct: 121 KNFNNLILNLAINYGGRNEILRAVKKFVSSDFDLES-------LNENVFSSFLDNPELPD 173
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRTGG R+S+F LW++AYSE +F WP++ + L + R R FG
Sbjct: 174 LDLLIRTGGNIRISNFFLWRIAYSELIFSNVLWPEYYDTRYSKDLECFQFRRRNFG 229
>gi|261366578|ref|ZP_05979461.1| di-trans,poly-cis-decaprenylcistransferase [Subdoligranulum
variabile DSM 15176]
gi|282571397|gb|EFB76932.1| di-trans,poly-cis-decaprenylcistransferase [Subdoligranulum
variabile DSM 15176]
Length = 241
Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 131/236 (55%), Gaps = 2/236 (0%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVA-AAAEVGIKNLTIFAFSIN 66
S P H II+DGN RWA R LP GH+ G + EI A + G+K L+++ FS
Sbjct: 7 SRIPTHAAIIVDGNRRWARQRMLPASLGHKAGFDRLKEITRYAVGDRGVKVLSLYVFSTE 66
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
N+ R E+ L+ L + + + + +V G R L +L + D T+
Sbjct: 67 NFARDAKEVGYLMDLFANNFRTIADEMNERGCQVLFSGRREGLQQRVLDAMDYMMDLTKD 126
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NT + NY S EI+ A+++I ++++SG++ +D I +L +P DL+I
Sbjct: 127 NTKGIVNFCLNYGSHAEITDAVRSIAREVKSGTLQPDAIDEKTIESHL-YRQLPPVDLMI 185
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE+RLS+FLLWQ AY+EF F P +PDF++E F AL +Y RDRR GG +KK
Sbjct: 186 RTSGEERLSNFLLWQCAYAEFYFTPVLFPDFTKECFDQALEEYARRDRRMGGNTKK 241
>gi|312136819|ref|YP_004004156.1| undecaprenyl pyrophosphate synthetase [Methanothermus fervidus DSM
2088]
gi|311224538|gb|ADP77394.1| Undecaprenyl pyrophosphate synthetase [Methanothermus fervidus DSM
2088]
Length = 255
Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 90/230 (39%), Positives = 137/230 (59%), Gaps = 3/230 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPR-CAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IIMDGN R+A G GH+KG++ +++ E+GIK +T++AFS N++
Sbjct: 25 PKHVAIIMDGNRRYARLIGSKDPTIGHKKGVKTLEKLLDWCIELGIKIVTVYAFSTENFK 84
Query: 70 RPVSEISELVKLIKSFLK--KGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
RP E+ +L+KL + K K + KN I+V+ IG L ++ +KEAE+ T+
Sbjct: 85 RPKHEVKKLMKLFEENFKRIKTDKKIHKNKIRVKAIGKLELLPKNLRKAIKEAEEATKHY 144
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L +A Y R EI A+K I + ++ G + ++++ ++ K+L T++V DP LIIR
Sbjct: 145 KERLLNVAIGYDGRQEIVDAVKKIAKKVKEGKLSLNEINEEVVDKHLYTAEVEDPQLIIR 204
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
T GE+RLS FLLWQ +YSE F WP+F + F A+ Y R+RRFG
Sbjct: 205 TSGEERLSGFLLWQSSYSELYFCDSLWPEFRKVDFLRAIRSYQQRERRFG 254
>gi|159039356|ref|YP_001538609.1| undecaprenyl diphosphate synthase [Salinispora arenicola CNS-205]
gi|157918191|gb|ABV99618.1| undecaprenyl diphosphate synthase [Salinispora arenicola CNS-205]
Length = 260
Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 128/228 (56%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ ++MDGNGRWA RGLPR GH G + V A E+GI L+ +AFS NWRR
Sbjct: 23 PRHVAVVMDGNGRWAKERGLPRTKGHEAGEFSLFDAVEGAIELGIPYLSAYAFSTENWRR 82
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ L ++V G L ++ L+ AE+ +R N+ L
Sbjct: 83 SPDEVRFLMGFNRDVIRRRRDQLVDLGVRVVWSGRAGRLWKSVITELQTAEEMSRGNSTL 142
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L NY + EI+ A I +D+ +G + V ++A+YL ++P+ DL +R G
Sbjct: 143 TLQFCVNYGGQAEIADAAAAIARDVAAGRLDPAKVTEKMVARYLYHPEIPEVDLFLRPSG 202
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S+FLLWQ AY+E VF+ WPDF R ++A Y RDRRFGG
Sbjct: 203 EQRTSNFLLWQSAYAELVFLDTLWPDFDRRHLWYACELYAQRDRRFGG 250
>gi|78777195|ref|YP_393510.1| di-trans-poly-cis-decaprenylcistransferase [Sulfurimonas
denitrificans DSM 1251]
gi|78497735|gb|ABB44275.1| Undecaprenyl pyrophosphate synthetase [Sulfurimonas denitrificans
DSM 1251]
Length = 225
Score = 162 bits (409), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 89/228 (39%), Positives = 126/228 (55%), Gaps = 10/228 (4%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVA-AAAEVGIKNLTIFAFSINNWRRP 71
HI IIMDGNGRWA RG R GH G +V + A I+ LT++AFS NW+RP
Sbjct: 6 HIAIIMDGNGRWAELRGKKRVKGHEAGAKVARAVTEFCAKHKEIQRLTLYAFSTENWKRP 65
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E+ L+KL++ +L + KNNI+ IG+ + + +++ E+++ GL
Sbjct: 66 KLEVEFLMKLLEKYLNSELETYLKNNIRFEPIGDISAFSSSLQKTIRDVEEKSAHCDGLV 125
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+A NY + DEI RAI + + D+ +++ LD D + DL+IRTGG+
Sbjct: 126 QSLALNYGAHDEILRAINRVKKR-------DDDITEAMLLDALDCKD--NVDLLIRTGGD 176
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLS+FLLWQ AY+E F WPDFS LN + +RRFGGL
Sbjct: 177 HRLSNFLLWQSAYAELFFTDTLWPDFSVNELEKTLNDFTKIERRFGGL 224
>gi|254458061|ref|ZP_05071488.1| undecaprenyl pyrophosphate synthetase 1 [Campylobacterales
bacterium GD 1]
gi|207085454|gb|EDZ62739.1| undecaprenyl pyrophosphate synthetase 1 [Campylobacterales
bacterium GD 1]
Length = 225
Score = 162 bits (409), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 127/231 (54%), Gaps = 14/231 (6%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVA-AAAEVGIKNLTIFAFSINNWRRP 71
HI IIMDGNGRWA G R GH G V EI + I+ LT++AFS NW+RP
Sbjct: 6 HIAIIMDGNGRWAELSGKKRVKGHEAGARVVKEITTYCSNNKEIERLTLYAFSTENWKRP 65
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E+ L+KL++++LK NN++ IG+ + + +K+ +D+T GL
Sbjct: 66 RLEVEFLMKLLENYLKNELPVYLDNNVRFEPIGDIRAFSKSLQKTIKDVKDKTAHCDGLV 125
Query: 132 LFIAFNYSSRDEISRAIKNI--FQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+A NY S+DE+ RAI I ++D D+ ++ LD D DL+IRTG
Sbjct: 126 QSLALNYGSQDEMLRAINKIKNYED---------DITQEMLGNALDCK--HDVDLLIRTG 174
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
G+ RLS+FLLWQ AY+E F+ WPDF+ + + Y +RRFGGL
Sbjct: 175 GDHRLSNFLLWQAAYAELFFVDTLWPDFTTDDLEKIIKSYKKIERRFGGLK 225
>gi|284989528|ref|YP_003408082.1| undecaprenyl diphosphate synthase [Geodermatophilus obscurus DSM
43160]
gi|284062773|gb|ADB73711.1| undecaprenyl diphosphate synthase [Geodermatophilus obscurus DSM
43160]
Length = 259
Score = 162 bits (409), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 89/243 (36%), Positives = 135/243 (55%), Gaps = 7/243 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ ++ ++ P H+G+I+DGN RWA A GL AGHR+G + + E G++ +T
Sbjct: 19 LAQALEGAAIPRHVGVIVDGNRRWARAIGLEDPNAGHRRGADKIASFLGWCDEAGVEVVT 78
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
+F S +N RP E+ L+++I+ + + ++R +G L + + VLK+
Sbjct: 79 LFLLSTDNLSRPEPELLPLLRIIEGVAED--LAAPDRRWQLRPVGALELLPAETVAVLKQ 136
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLD 175
A + TR G + +A Y R EI+ A++++ + + ++ D IA++L
Sbjct: 137 AAEDTRDRPGATVNLAVGYGGRREIADAVRSLLAEHAARGTTLDELVGVLDVEHIAEHLY 196
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
T PDPDL+IRT GE+RLS FLLWQ A+SEF F YWPDF R F AL Y R RR
Sbjct: 197 TRGQPDPDLVIRTSGEQRLSGFLLWQTAHSEFHFTDVYWPDFRRVDFLRALRAYAARHRR 256
Query: 236 FGG 238
FGG
Sbjct: 257 FGG 259
>gi|314923089|gb|EFS86920.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL001PA1]
gi|314966858|gb|EFT10957.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL082PA2]
gi|314981200|gb|EFT25294.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL110PA3]
gi|315091771|gb|EFT63747.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL110PA4]
gi|315093221|gb|EFT65197.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL060PA1]
gi|315103275|gb|EFT75251.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL050PA2]
gi|315105480|gb|EFT77456.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL030PA1]
gi|327327683|gb|EGE69459.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL103PA1]
Length = 231
Score = 162 bits (409), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 84/221 (38%), Positives = 120/221 (54%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA RGL R GH +G + +++ A E+GI L+ +AFS NW+R E+
Sbjct: 1 MDGNGRWARQRGLRRTEGHARGEDALFDVIEGAIEMGIPYLSAYAFSTENWKRSPDEVRW 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ + + + L +++R G R L ++ L+ AE Q+ NT L L N
Sbjct: 61 LMGFNRDVIHRRRDQLDAMGVRIRWAGRRPKLWKSVIKELESAEKQSADNTVLTLQFCVN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R EI A+++I + G + + +LD +VPD DL R+ GE+R S+F
Sbjct: 121 YGGRAEIVDAVRDIARLTAEGKIDPDHITEKTFRTHLDEPEVPDVDLFWRSSGEQRTSNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
LLWQ AY+E VF WPD R + A+ +Y RDRRFGG
Sbjct: 181 LLWQSAYAEMVFSDVLWPDVDRRDLWAAVMEYAKRDRRFGG 221
>gi|162454473|ref|YP_001616840.1| undecaprenyl diphosphate synthase [Sorangium cellulosum 'So ce 56']
gi|161165055|emb|CAN96360.1| Undecaprenyl diphosphate synthase [Sorangium cellulosum 'So ce 56']
Length = 286
Score = 162 bits (409), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 87/223 (39%), Positives = 132/223 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+GIIMDGNGRWA RG PR AGH+ G IV +G++ LT++AFS NW R
Sbjct: 10 PRHVGIIMDGNGRWAELRGEPREAGHKAGSAAVRRIVRVCRRLGVEALTLYAFSEQNWAR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L+ L++ +L + +N+I++ IG+ L + + VL + N +
Sbjct: 70 PRNEVDALMGLLREYLMSERCEILENDIRLVAIGDISRLPEGVRDVLDPLRKASATNRQM 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y +R+EI+ A + + + +G + +D +L+A L + V +PDLIIRTGG
Sbjct: 130 TLALALSYGAREEIAAAARELAMEAVAGRLDPESIDGALLAARLPSLSVGEPDLIIRTGG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
E+RLS+FLL+ AY+E F WPDF+ + F A+ Y RD
Sbjct: 190 EQRLSNFLLYGAAYAELSFTERLWPDFTEDDLFAAIAAYQRRD 232
>gi|48478450|ref|YP_024156.1| undecaprenyl pyrophosphate synthetase [Picrophilus torridus DSM
9790]
gi|73920271|sp|Q6KZ89|UPPS_PICTO RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|48431098|gb|AAT43963.1| undecaprenyl pyrophosphate synthetase [Picrophilus torridus DSM
9790]
Length = 255
Score = 162 bits (409), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 92/243 (37%), Positives = 130/243 (53%), Gaps = 10/243 (4%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + P H+GII DGN R+A + G+ GH KG E E++ + EVGI +T+
Sbjct: 16 LLEEIKKHPVPGHLGIITDGNRRYARSIGISENEGHVKGKEKLEEVLNWSMEVGIHMVTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSL------KKNNIKVRVIGNRLSLDDDIL 114
+AFS N++R E++ L LI F L KN I+V+VIG+ L D +
Sbjct: 76 YAFSTENFKRKSDEVNFLFNLIND----AFIDLLNDERVYKNGIRVKVIGDISKLPDYLK 131
Query: 115 CVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYL 174
+K E +T +A Y R EI AIK I QDI +G + +++ + YL
Sbjct: 132 ETIKRVEGETNKFKNFRFNLAIGYGGRQEIIDAIKKIGQDILNGKIKVDNINEEMFRSYL 191
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
+PDPDLI+RT GE+R+S+FLLWQ AYSE F WP+ + F A+ Y R R
Sbjct: 192 YDKTLPDPDLILRTSGEERISNFLLWQSAYSELYFADVNWPELRKIDFLRAIYSYQNRKR 251
Query: 235 RFG 237
RFG
Sbjct: 252 RFG 254
>gi|297527185|ref|YP_003669209.1| undecaprenyl diphosphate synthase [Staphylothermus hellenicus DSM
12710]
gi|297256101|gb|ADI32310.1| undecaprenyl diphosphate synthase [Staphylothermus hellenicus DSM
12710]
Length = 269
Score = 162 bits (409), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 133/241 (55%), Gaps = 4/241 (1%)
Query: 1 MVASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
M+ + + P P HIGII DGN RWA G GH G + + + E+ I+ +T
Sbjct: 28 MLWLQIKNGPFPAHIGIIPDGNRRWAKRSGFDPKQGHEYGYQRIKDALNWIWELNIRYVT 87
Query: 60 IFAFSINN-WRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCV 116
++A S N RP+ E L ++K L++ + + I+++V G + DI+ +
Sbjct: 88 LYAMSSENCLYRPLDERRHLFNIVKKGLQELINMPEIHEKKIQIKVFGRLELVPKDIVEL 147
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT 176
+ E+QT+ L IA Y R EI A++ I +D +SG + ++D ++YL T
Sbjct: 148 AHKIEEQTKHYKEYRLNIALCYGGRQEILEAVRKIVKDAQSGKINPENIDEETFSRYLYT 207
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
+ PDPDLIIRT GE R+S+FLLWQ AYSE F YWP+F + F+ A+ Y R+RR+
Sbjct: 208 NGCPDPDLIIRTSGEVRISNFLLWQSAYSELYFCEAYWPEFRKIDFWRAIRSYQRRERRY 267
Query: 237 G 237
G
Sbjct: 268 G 268
>gi|330814010|ref|YP_004358249.1| undecaprenyl pyrophosphate synthetase [Candidatus Pelagibacter sp.
IMCC9063]
gi|327487105|gb|AEA81510.1| undecaprenyl pyrophosphate synthetase [Candidatus Pelagibacter sp.
IMCC9063]
Length = 217
Score = 161 bits (408), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 86/222 (38%), Positives = 136/222 (61%), Gaps = 7/222 (3%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA R PR GH++G++ + ++ A + IK LT+F FS++NW+R E++
Sbjct: 1 MDGNGRWALKRNKPRNFGHQEGLKNISSLIDFAKKNKIKFLTLFVFSLDNWKRSKREVNF 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L L++ FL K L K IK++ IG R +L ++ +K+ E + +N + + +AFN
Sbjct: 61 LFNLLEKFLDKNINELIKKKIKIKSIGERKNLSKKLINKIKKVEKLSSVNYDITVNLAFN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
YSS+ EI ++K + I+ + + D I L T ++PDP+L+IRTGG+ RLSDF
Sbjct: 121 YSSKTEIIESLK---KSIKQKAKITVDT----IKNNLYTKNIPDPELLIRTGGKNRLSDF 173
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+LWQ++Y+E F+ + WPDF++ F L +Y R FG +
Sbjct: 174 MLWQMSYTEIFFLNKLWPDFNKNDFKKILREYQKIKRNFGSI 215
>gi|297564922|ref|YP_003683894.1| undecaprenyl diphosphate synthase [Meiothermus silvanus DSM 9946]
gi|296849371|gb|ADH62386.1| undecaprenyl diphosphate synthase [Meiothermus silvanus DSM 9946]
Length = 278
Score = 161 bits (408), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 90/236 (38%), Positives = 131/236 (55%), Gaps = 12/236 (5%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+G+I+DGN R+A + GL GH G+ E++ E+GI+ +T++ FS +NW R
Sbjct: 45 PKHLGMILDGNRRFARSLGLEGHQGHEFGVAKAYEVLEWCLELGIRTVTVWVFSTDNWSR 104
Query: 71 PVSEISELVKLIKSFLKKGFY-----SLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
E+ L+ L F+K+ + N ++V+VIG R +L L+E E T
Sbjct: 105 SQKEVETLMNL---FVKEARRMAVDPRIHANEVRVKVIGRRDRFPPKVLEALEELERTTE 161
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIF----QDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ G+ L IA Y R+EI A+K + Q +S + ++D I + L T+ VPD
Sbjct: 162 QHEGMLLQIAMGYGGREEIVDAVKALLLEAAQTGKSPEELASELDIEHIGERLYTAGVPD 221
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PD IIRT GE RLS FLLWQ A+SE+ F +WP F + F A+ Y R+RRFG
Sbjct: 222 PDFIIRTSGEVRLSGFLLWQSAHSEYYFFDAFWPAFRKVDFLRAIRSYQGRERRFG 277
>gi|330469588|ref|YP_004407331.1| undecaprenyl diphosphate synthase [Verrucosispora maris AB-18-032]
gi|328812559|gb|AEB46731.1| undecaprenyl diphosphate synthase [Verrucosispora maris AB-18-032]
Length = 270
Score = 161 bits (408), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 126/228 (55%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ ++MDGNGRWA RGLPR GH G + V A E+GI L+ +AFS NWRR
Sbjct: 33 PKHVAVVMDGNGRWAKERGLPRTKGHEAGEFSLFDTVEGAIEMGIPYLSAYAFSTENWRR 92
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ L ++V G L ++ L+ AE+ +R N+ L
Sbjct: 93 SPDEVRFLMGFNRDVIRRRRDQLIDLGVRVVWSGRAGRLWKSVISELQTAEEMSRGNSTL 152
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L NY + EI+ A I +D +G + V +A+YL +VP+ DL +R G
Sbjct: 153 TLQFCVNYGGQAEIADAAAAIARDAAAGKLDPAKVTEKTVARYLYHPEVPEVDLFLRPSG 212
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S+F+LWQ AY+E VF+ WPDF R ++A Y RDRRFGG
Sbjct: 213 EQRTSNFMLWQSAYAELVFLDTLWPDFDRRHLWYACELYAQRDRRFGG 260
>gi|313772410|gb|EFS38376.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL074PA1]
gi|313792240|gb|EFS40341.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL110PA1]
gi|313801811|gb|EFS43045.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL110PA2]
gi|313807420|gb|EFS45907.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL087PA2]
gi|313809928|gb|EFS47649.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL083PA1]
gi|313813034|gb|EFS50748.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL025PA1]
gi|313818466|gb|EFS56180.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL046PA2]
gi|313820229|gb|EFS57943.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL036PA1]
gi|313822962|gb|EFS60676.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL036PA2]
gi|313825110|gb|EFS62824.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL063PA1]
gi|313830259|gb|EFS67973.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL007PA1]
gi|313834060|gb|EFS71774.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL056PA1]
gi|313838637|gb|EFS76351.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL086PA1]
gi|314925457|gb|EFS89288.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL036PA3]
gi|314960097|gb|EFT04199.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL002PA2]
gi|314962899|gb|EFT06999.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL082PA1]
gi|314973265|gb|EFT17361.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL053PA1]
gi|314975940|gb|EFT20035.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL045PA1]
gi|314978303|gb|EFT22397.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL072PA2]
gi|314984042|gb|EFT28134.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL005PA1]
gi|314987805|gb|EFT31896.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL005PA2]
gi|314990026|gb|EFT34117.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL005PA3]
gi|315078114|gb|EFT50165.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL053PA2]
gi|315080743|gb|EFT52719.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL078PA1]
gi|315085753|gb|EFT57729.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL002PA3]
gi|315088829|gb|EFT60805.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL072PA1]
gi|315096177|gb|EFT68153.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL038PA1]
gi|327326094|gb|EGE67884.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL096PA2]
gi|327330801|gb|EGE72547.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL097PA1]
gi|327332035|gb|EGE73772.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL096PA3]
gi|327443238|gb|EGE89892.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL013PA2]
gi|327446024|gb|EGE92678.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL043PA2]
gi|327447998|gb|EGE94652.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL043PA1]
gi|327453045|gb|EGE99699.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL092PA1]
gi|328753565|gb|EGF67181.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL020PA1]
gi|328760405|gb|EGF73973.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL099PA1]
Length = 231
Score = 161 bits (407), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 84/221 (38%), Positives = 120/221 (54%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA RGL R GH +G + +++ A E+GI L+ +AFS NW+R E+
Sbjct: 1 MDGNGRWARQRGLRRTEGHARGEDALFDVIEGAIEMGIPYLSAYAFSTENWKRSPDEVRW 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ + + + L +++R G R L ++ L+ AE Q+ NT L L N
Sbjct: 61 LMGFNRDVIHRRRDQLDAMGVRIRWAGRRPKLWKSVIKELESAEKQSTDNTVLTLQFCVN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R EI A+++I + G + + +LD +VPD DL R+ GE+R S+F
Sbjct: 121 YGGRAEIVDAVRDIARLAAEGKIDPDHITEKTFRTHLDEPEVPDVDLFWRSSGEQRTSNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
LLWQ AY+E VF WPD R + A+ +Y RDRRFGG
Sbjct: 181 LLWQSAYAEMVFSDVLWPDVDRRDLWAAVVEYAKRDRRFGG 221
>gi|239947288|ref|ZP_04699041.1| di-trans,poly-cis-decaprenylcistransferase [Rickettsia endosymbiont
of Ixodes scapularis]
gi|239921564|gb|EER21588.1| di-trans,poly-cis-decaprenylcistransferase [Rickettsia endosymbiont
of Ixodes scapularis]
Length = 249
Score = 161 bits (407), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 87/225 (38%), Positives = 127/225 (56%), Gaps = 6/225 (2%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGN RWA L + GH+ G + E++ +G+ +T++ FS NW+R
Sbjct: 29 HLAIIMDGNARWADRHNLTKSEGHKAGADKIRELLPEFINLGVPYVTLYTFSSENWQRSS 88
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+E+ L+KL+ +LK +L KN +K++VIG L + + A + T+ N + L
Sbjct: 89 TEVDFLIKLLSIYLKNELNNLHKNGVKIKVIGRLNLLSSSLQKQINNAIELTKNNNKITL 148
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IAF+Y SR EI A I I SG +V S I L ++PD DL+IR G
Sbjct: 149 CIAFSYGSRQEIVDAYTKI---IASG---KKEVSESDIQHALYDPEMPDVDLLIRPGEVY 202
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
R+S+FLLWQ AY+E F +YWPDF+++ A+N Y+ R R FG
Sbjct: 203 RISNFLLWQAAYAELYFSSKYWPDFNKDDILEAINDYSKRKRTFG 247
>gi|313764552|gb|EFS35916.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL013PA1]
gi|313816093|gb|EFS53807.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL059PA1]
gi|313827679|gb|EFS65393.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL063PA2]
gi|314915548|gb|EFS79379.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL005PA4]
gi|314918499|gb|EFS82330.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL050PA1]
gi|314919985|gb|EFS83816.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL050PA3]
gi|314931998|gb|EFS95829.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL067PA1]
gi|314955867|gb|EFT00267.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL027PA1]
gi|314958348|gb|EFT02451.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL002PA1]
gi|314968024|gb|EFT12123.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL037PA1]
gi|315098439|gb|EFT70415.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL059PA2]
gi|315101204|gb|EFT73180.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL046PA1]
gi|315108425|gb|EFT80401.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL030PA2]
gi|327450878|gb|EGE97532.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL087PA3]
gi|327453773|gb|EGF00428.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL083PA2]
gi|328754298|gb|EGF67914.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL087PA1]
gi|328754450|gb|EGF68066.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL025PA2]
Length = 231
Score = 161 bits (407), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 84/221 (38%), Positives = 120/221 (54%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA RGL R GH +G + +++ A E+GI L+ +AFS NW+R E+
Sbjct: 1 MDGNGRWARQRGLRRTEGHARGEDALFDVIEGAIEMGIPYLSAYAFSTENWKRSPDEVRW 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ + + + L +++R G R L ++ L+ AE Q+ NT L L N
Sbjct: 61 LMGFNRDVIHRRRDQLDAMGVRIRWAGRRPKLWKSVIKELESAEKQSTDNTVLTLQFCVN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R EI A+++I + G + + +LD +VPD DL R+ GE+R S+F
Sbjct: 121 YGGRAEIVDAVRDIARLAAEGKIDPDHITEKTFRTHLDEPEVPDVDLFWRSSGEQRTSNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
LLWQ AY+E VF WPD R + A+ +Y RDRRFGG
Sbjct: 181 LLWQSAYAEMVFSDVLWPDVDRRDLWAAVVEYAKRDRRFGG 221
>gi|269125329|ref|YP_003298699.1| undecaprenyl diphosphate synthase [Thermomonospora curvata DSM
43183]
gi|268310287|gb|ACY96661.1| undecaprenyl diphosphate synthase [Thermomonospora curvata DSM
43183]
Length = 271
Score = 161 bits (407), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 90/241 (37%), Positives = 140/241 (58%), Gaps = 11/241 (4%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+S+ + P H+G+I+DGN RWA A GL + GH++G + +E++ E ++ +T++
Sbjct: 35 SSLPTDKIPRHVGVILDGNRRWARAMGLSDVSTGHQRGADKISELLQWCTEARVEVVTLW 94
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
S +N RP E++ L+++I++ + K L + ++ +G L D VLK AE
Sbjct: 95 MLSTDNLNRPAKELNPLLEIIENTVAK----LAREGWHIKAVGAMDLLPDSTARVLKHAE 150
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD-----VDSSLIAKYLDT 176
+ T GL + +A Y R EI+ A++++ + ++G S + +D IAK+L T
Sbjct: 151 ESTSDRPGLIVNVAVGYGGRREIADAVRSLLLE-QAGKGTSIEELAEVLDVEHIAKHLYT 209
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
PDPDL+IRT GE+RLS FLLWQ A+SEF F +WPDF + F AL Y R RRF
Sbjct: 210 RGQPDPDLVIRTSGEQRLSGFLLWQSAHSEFHFCEVHWPDFRKIDFLRALRSYAARHRRF 269
Query: 237 G 237
G
Sbjct: 270 G 270
>gi|308809740|ref|XP_003082179.1| COG0020: Undecaprenyl pyrophosphate synthase (ISS) [Ostreococcus
tauri]
gi|116060647|emb|CAL57125.1| COG0020: Undecaprenyl pyrophosphate synthase (ISS) [Ostreococcus
tauri]
Length = 740
Score = 161 bits (407), Expect = 8e-38, Method: Composition-based stats.
Identities = 82/239 (34%), Positives = 130/239 (54%), Gaps = 11/239 (4%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
++ + S P+H+ IIMDGN RWA R LPR GH +G+ +V A ++ LT+F
Sbjct: 140 LSGLASDRVPNHVAIIMDGNARWATRRRLPRSVGHERGVSALRGVVRCCAAWDVRTLTVF 199
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS N+ R E++EL+ L+++ L+ L K ++V VIG+ + + + + A
Sbjct: 200 AFSQENFGRNQVEVTELMALVETALQDELPLLVKEGVRVEVIGDLDKVSEGVREAVGRAV 259
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ T+ N+ L L +A +Y R +I +A K + + SG + + D+D +++ +L T D
Sbjct: 260 EATKHNSTLRLVVALSYGGRQDIVQAAKALANKVASGELRAEDIDEDVLSAHLSTYDARS 319
Query: 182 -----------PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQY 229
PDL+IRT GE RLS+FLLW +AY+E F WP+F A + Y
Sbjct: 320 ANEDPLNFSQHPDLLIRTSGEMRLSNFLLWDLAYTELYFANMMWPEFGEAELRRAFHAY 378
>gi|269123369|ref|YP_003305946.1| undecaprenyl diphosphate synthase [Streptobacillus moniliformis DSM
12112]
gi|268314695|gb|ACZ01069.1| undecaprenyl diphosphate synthase [Streptobacillus moniliformis DSM
12112]
Length = 244
Score = 161 bits (407), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 135/230 (58%), Gaps = 7/230 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA R L R GH+ G EI+ ++ IK LT++AFS NW+R
Sbjct: 21 PKHIGIIMDGNGRWAKQRNLARTEGHKAGANKLEEIIECIMDLDIKYLTVYAFSTENWKR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ ++KL +LK K I+V + G+R +L ++ ++ E+ T+ N L
Sbjct: 81 PKLEVTAIMKLFTKYLKINEEKFMKEKIRVCISGSRSNLSSSLIKQIEYIENLTKDNDKL 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IAFNY R EI A+K + + +++ + I+ + S +PD DL+IRTG
Sbjct: 141 VLNIAFNYGGRLEIIDALKKVVAK-------NLEINENNISNNMYNSFIPDVDLVIRTGN 193
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
+ R+S+FLLWQ+AYSE WPDF++E ++ + R+RRFGG+
Sbjct: 194 DFRISNFLLWQIAYSEIYVSELLWPDFTKEELHKSIFSFINRERRFGGIK 243
>gi|51473613|ref|YP_067370.1| bactoprenyl-diphosphate synthase [Rickettsia typhi str. Wilmington]
gi|73920274|sp|Q68WV4|UPPS_RICTY RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|51459925|gb|AAU03888.1| Bactoprenyl-diphosphate synthase [Rickettsia typhi str. Wilmington]
Length = 226
Score = 161 bits (407), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 129/225 (57%), Gaps = 6/225 (2%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGN RWA L + GH+ G + E++ + I +T++ FS NW+R
Sbjct: 6 HLAIIMDGNARWADQHNLTKSEGHKAGADKIRELLPEFINLNIPYITLYTFSSENWQRSS 65
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
SE++ L+KL+ +LK SL +N +K++VIG L + + A + T+ N + L
Sbjct: 66 SEVNFLIKLLSLYLKNELDSLHENGVKIKVIGRLNLLRSSLQKQINNAIELTQNNNKIKL 125
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IAF+Y SR EI A I + + V +D+ +L ++PD DL+IR+GG
Sbjct: 126 CIAFSYGSRQEIVDACTKIIANGKK-QVSENDIQHALY-----DPEMPDVDLLIRSGGVY 179
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
R+S+FLLWQ AY+E F +YWPDF+++ A+N Y+ R R FG
Sbjct: 180 RISNFLLWQAAYAELYFSQKYWPDFNKDDIHEAINDYSKRKRTFG 224
>gi|15604290|ref|NP_220806.1| hypothetical protein RP425 [Rickettsia prowazekii str. Madrid E]
gi|6647891|sp|Q9ZDA7|UPPS_RICPR RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|3860982|emb|CAA14882.1| unknown [Rickettsia prowazekii]
gi|292572039|gb|ADE29954.1| Undecaprenyl pyrophosphate synthetase [Rickettsia prowazekii Rp22]
Length = 226
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 127/225 (56%), Gaps = 6/225 (2%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGN RWA L + GH+ G + E++ + I +T++ FS NW+R
Sbjct: 6 HLAIIMDGNARWADRHNLTKSEGHKAGADKIRELLPEFINLNIPYITLYTFSFENWQRSS 65
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
SE+ L+KL+ +LK SL +N +K++VIG L + + A + T+ N + L
Sbjct: 66 SEVDFLIKLLSIYLKNELDSLHENGVKIKVIGRLNLLRSSLQKQINNAIELTKNNNKIKL 125
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IAF+Y SR EI A I + V +D+ +L ++PD DL+IR+GG
Sbjct: 126 CIAFSYGSRQEIVDACTKIIAHGKK-QVSEYDIQHALY-----DPEMPDVDLLIRSGGVY 179
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
R+S+FLLWQ AY+E F +YWPDF+++ A+N Y+ R R FG
Sbjct: 180 RISNFLLWQAAYAELYFSQKYWPDFNKDDIHEAINDYSKRKRTFG 224
>gi|226355020|ref|YP_002784760.1| undecaprenyl pyrophosphate synthase [Deinococcus deserti VCD115]
gi|226317010|gb|ACO45006.1| putative Undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans,poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS) [Deinococcus
deserti VCD115]
Length = 276
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/236 (38%), Positives = 127/236 (53%), Gaps = 12/236 (5%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+G+I+DGN R+A A GL R GH G E +E++ E+GI TI+ S +N R
Sbjct: 43 PRHLGLILDGNRRFARAAGLQREMGHSFGAEKAHEVLQWCLELGIPAATIWVLSTDNTSR 102
Query: 71 PVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
E++ ++ L++ + + N ++VR IG + +L L+E E++T
Sbjct: 103 DPQELAHILALLEKEARNLATDPRIHANRVRVRAIGQHANFPSHVLTALRELEERTAHYD 162
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQ-------DIESGSVCSHDVDSSLIAKYLDTSDVPD 181
G+ L IA Y R+EI A+K Q D+ + C D I+ +L +D+PD
Sbjct: 163 GMRLNIAVGYGGREEIVDAVKTHLQMQAAAGRDLSEVAACLRPDD---ISAHLYAADIPD 219
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PD IIRT GE RLS F+LWQ YSE+ F YWP F R F AL + RDRRFG
Sbjct: 220 PDFIIRTSGEIRLSGFMLWQSVYSEYYFCDVYWPGFRRVDFLRALRDFQGRDRRFG 275
>gi|297572049|ref|YP_003697823.1| undecaprenyl diphosphate synthase [Arcanobacterium haemolyticum DSM
20595]
gi|296932396|gb|ADH93204.1| undecaprenyl diphosphate synthase [Arcanobacterium haemolyticum DSM
20595]
Length = 252
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 135/242 (55%), Gaps = 9/242 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + S P H+GII+DGN RWA A G P GHRKG + E++ E G+ +T+
Sbjct: 14 LARQIRQSQIPRHVGIILDGNRRWAKALGTPAAHGHRKGADHITEVLGWVQEAGVSIVTL 73
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKN-NIKVRVIGNRLSLDDDILCVLKE 119
+ S +N +R EI EL+ +I +++ L N ++RV+G+ L DD L+
Sbjct: 74 WMLSTDNLQRSAKEIRELLAIIVGAVEQ----LAANPQWQIRVLGDLDLLPDDAAAALRA 129
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLD 175
A ++T + G+ + +A Y R EI+RA+++ ++ +V SS+ I ++
Sbjct: 130 AAERTSAHDGMIVNVAIGYGGRQEITRAVQDYLREQAQSGATLEEVASSITVDAITNHMY 189
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
T PDPDLIIRT GE+R+S F+LWQ ++E F YWPDF R AL +++RDRR
Sbjct: 190 TKGQPDPDLIIRTSGEQRMSGFMLWQTVHTELYFCETYWPDFRRTDLLRALRDFSVRDRR 249
Query: 236 FG 237
G
Sbjct: 250 KG 251
>gi|255327344|ref|ZP_05368418.1| undecaprenyl pyrophosphate synthetase [Rothia mucilaginosa ATCC
25296]
gi|255295624|gb|EET74967.1| undecaprenyl pyrophosphate synthetase [Rothia mucilaginosa ATCC
25296]
Length = 269
Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/241 (38%), Positives = 131/241 (54%), Gaps = 7/241 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ S+ S P HIG+++DGN RWAA RGL GH G E + +A E+ I +++
Sbjct: 31 LARSLSPESLPAHIGVLVDGNRRWAAQRGLSTREGHAAGAERIIDFLAWCTELSIPQVSL 90
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S N +RP E++ LV +I +FL + S VR IGN + + L A
Sbjct: 91 YMLSTENLKRPEKELTGLVAVIDAFLVRLVESACG---PVRAIGNIDLIPRQLHERLDWA 147
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDT 176
+QT G+ + IA Y R EI A++++ ++ + + L I+ +L T
Sbjct: 148 IEQTAHLPGVRVNIAVGYGGRQEIVDAVRSVLREAAAEGASLDSLAEQLSVEDISSHLYT 207
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
+D+PDPDL+IRT GE+RLS F+ WQ AYSEF F WPDF+R F AL Y R RRF
Sbjct: 208 ADMPDPDLLIRTSGEQRLSGFMTWQSAYSEFYFCRALWPDFTRVDFLRALRDYANRSRRF 267
Query: 237 G 237
G
Sbjct: 268 G 268
>gi|170289872|ref|YP_001736688.1| undecaprenyl diphosphate synthase [Candidatus Korarchaeum
cryptofilum OPF8]
gi|170173952|gb|ACB07005.1| undecaprenyl diphosphate synthase [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 262
Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/241 (36%), Positives = 138/241 (57%), Gaps = 7/241 (2%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ S++ P P H+ +I+DGN R+A R L G+R G E++ ++GI+++T+
Sbjct: 23 LESVVREGPIPKHVALILDGNRRYAIKRSLSWLEGYRIGANKTKELLEWLLDLGIEHVTL 82
Query: 61 FAFSINNWRRPVSEISELVKLIKSFL---KKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
FAFS N+RRP ++ + K ++ L K+ +LK+ + RV+G + L + I +
Sbjct: 83 FAFSTENFRRPKDQVEAIFKAMEEKLLELKENIGTLKEREVSFRVVGRKDMLPEGIRSIA 142
Query: 118 KEAEDQTR-LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT 176
+E E T + LNL IA Y R EI A++ I + ++ G++ ++D +I +L
Sbjct: 143 EEMEASTSGFSKTLNLAIA--YGGRAEIVDAVRKIARKVKEGTLNPDEIDDDVIRMHLYA 200
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
D+PDPDLIIRT GE+RLS+FLLWQ AYSE F Y P+ + A+ Y R RRF
Sbjct: 201 PDLPDPDLIIRTSGEERLSNFLLWQSAYSELYFCEVYLPELRKVDLLRAIRDYQRRKRRF 260
Query: 237 G 237
G
Sbjct: 261 G 261
>gi|15594465|ref|NP_212254.1| undecaprenyl pyrophosphate synthase [Borrelia burgdorferi B31]
gi|226321969|ref|ZP_03797494.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia burgdorferi
Bol26]
gi|6136143|sp|O51146|UPPS_BORBU RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|2688015|gb|AAC66517.1| conserved hypothetical protein [Borrelia burgdorferi B31]
gi|226232559|gb|EEH31313.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia burgdorferi
Bol26]
Length = 230
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 135/236 (57%), Gaps = 10/236 (4%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M S P H+GIIMDGN RWA + L G+++G++ EIV + VGIK L+ + FS
Sbjct: 1 MNKGSLPSHVGIIMDGNRRWALGKRLSSLEGYKEGLKRAKEIVKYSLRVGIKCLSFYVFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRR EI L+ LI ++L+ F +KN IK+ V G+ SL ++ +K++ +
Sbjct: 61 TENWRRDDCEIENLMFLIANYLRAEFDFYEKNGIKIIVSGDVESLSGEVKSSIKDSISFS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQ---DIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ L L +A NY R+EI RA+K D+ES ++ ++ + +LD ++PD
Sbjct: 121 KNFNNLILNLAINYGGRNEILRAVKKFVSSDFDLES-------LNENIFSSFLDNPELPD 173
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRTGG R+S+F LW++AYSE +F WP++ + L + R R FG
Sbjct: 174 LDLLIRTGGNIRISNFFLWRIAYSELIFSNVLWPEYYDTRYSKDLECFQFRRRNFG 229
>gi|283458638|ref|YP_003363273.1| undecaprenyl pyrophosphate synthase [Rothia mucilaginosa DY-18]
gi|283134688|dbj|BAI65453.1| undecaprenyl pyrophosphate synthase [Rothia mucilaginosa DY-18]
Length = 290
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/231 (39%), Positives = 128/231 (55%), Gaps = 7/231 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+++DGN RWAA RGL GH G E + +A E+ I ++++ S+ N +R
Sbjct: 62 PAHIGVLVDGNRRWAAQRGLSTREGHAAGAERIIDFLAWCTELSIPQVSLYMLSVENLKR 121
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ LV +I +FL + S VR IGN + + L A QT +G+
Sbjct: 122 PEQELTGLVAVIDNFLVRLVESACG---PVRAIGNIDLIPRQLHERLDWAIAQTAHLSGV 178
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDVPDPDLII 186
+ IA Y R EI A++++ + + D+ L I+ +L T+D+PDPDL+I
Sbjct: 179 RVNIAVGYGGRQEIVDAVRSVLLEAAAKGTSLEDMADLLNVEDISSHLYTADMPDPDLLI 238
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE+RLS F+ WQ AYSEF F WPDF+R F AL Y R RRFG
Sbjct: 239 RTSGEQRLSGFMTWQSAYSEFYFCRALWPDFTRVDFLRALRDYANRSRRFG 289
>gi|224419258|ref|ZP_03657264.1| hypothetical protein HcanM9_08298 [Helicobacter canadensis MIT
98-5491]
gi|253826973|ref|ZP_04869858.1| undecaprenyl pyrophosphate synthetase [Helicobacter canadensis MIT
98-5491]
gi|313142760|ref|ZP_07804953.1| undecaprenyl pyrophosphate synthetase [Helicobacter canadensis MIT
98-5491]
gi|253510379|gb|EES89038.1| undecaprenyl pyrophosphate synthetase [Helicobacter canadensis MIT
98-5491]
gi|313131791|gb|EFR49408.1| undecaprenyl pyrophosphate synthetase [Helicobacter canadensis MIT
98-5491]
Length = 224
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 130/228 (57%), Gaps = 8/228 (3%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA R PR GH++G + + I + GIK L+++AFS NW RP
Sbjct: 4 HLAIIMDGNGRWAKNRFKPRFFGHQEGAKTIHSITETCVKKGIKYLSLYAFSTENWNRPK 63
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN-TGLN 131
EI L+ L++ +L + + +NI +VIG+ + + + + T + GL
Sbjct: 64 KEIDFLMNLLEKYLHEQTQTYLDSNIIFKVIGDISVFNSKLQEKIHHLQSITAESCNGLT 123
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+A NY ++DE+ RA F I++ ++ + I + LDT+ +P+ D++IRTGGE
Sbjct: 124 QILALNYGAKDELRRA----FLKIQNKNL---PITQESITQNLDTAGIPEVDMLIRTGGE 176
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+RLS+FLLWQ AY+E F WPDF + + ++ R RRFG +
Sbjct: 177 QRLSNFLLWQSAYAELFFTKTLWPDFGSDELEAMIEKFATRQRRFGAI 224
>gi|325284097|ref|YP_004256638.1| Undecaprenyl pyrophosphate synthase [Deinococcus proteolyticus MRP]
gi|324315906|gb|ADY27021.1| Undecaprenyl pyrophosphate synthase [Deinococcus proteolyticus MRP]
Length = 286
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 130/233 (55%), Gaps = 6/233 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+G+I+DGN R+A A GL R GH G + +E++ E+GI +TI+ S +N R
Sbjct: 53 PQHLGLILDGNRRFARAAGLQREMGHSIGADKAHEVLEWCLELGIPAVTIWVLSTDNAGR 112
Query: 71 PVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
E+ ++ L++ + + +N +KV+VIG S D+L LK E+ T +
Sbjct: 113 DPDELGHILGLLRREATQLAVDPRIHRNRVKVQVIGQHDSFPPDVLRALKNLEESTAHHD 172
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDVPDPDL 184
G+ L IA Y R+EI A+K ++ + +V + L I+++L T+ +PDPD
Sbjct: 173 GMRLNIAVGYGGREEIVNAVKCHLREQAAQGRTLEEVAAGLHSADISRHLYTAGIPDPDF 232
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IIRT GE RLS F+LWQ YSE+ F YWP F R F AL + R RRFG
Sbjct: 233 IIRTSGEVRLSGFMLWQSVYSEYYFCDVYWPGFRRVDFLRALRDFQGRSRRFG 285
>gi|296118175|ref|ZP_06836756.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
ammoniagenes DSM 20306]
gi|295968733|gb|EFG81977.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
ammoniagenes DSM 20306]
Length = 256
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 138/242 (57%), Gaps = 7/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLT 59
+++ + P H+ ++ DGN RWA G + GHR+G + +E+V+ A+ ++ +T
Sbjct: 16 LISELKGKPQPKHVAVMADGNRRWAREAGFEDISHGHRQGAKKISEMVSWCADTEVEVVT 75
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
I+ S N +R +E+S L +I + S N +VR++G+ L D++ +
Sbjct: 76 IYLLSTENLKRSKNEVSLLFDIITEVVD--HLSHGDLNCQVRLVGHLDLLPDEVTNAMCS 133
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQ-DIESGSVCSHDVDS---SLIAKYLD 175
A D TR N G+ + IA Y R EI+ A+K + + ++E+G+ V+S I+K+L
Sbjct: 134 AADDTRDNDGVIVNIAVGYGGRQEIADAVKAMLKKEVEAGATPEELVESITVDSISKHLY 193
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
T +PDPDL+IRT GE+RLS FLLWQ AYSE F YWP F + F AL ++ R RR
Sbjct: 194 TKGLPDPDLVIRTSGEQRLSGFLLWQAAYSEIWFTDTYWPAFRKIDFLRALRDFSQRSRR 253
Query: 236 FG 237
FG
Sbjct: 254 FG 255
>gi|218884238|ref|YP_002428620.1| undecaprenyl diphosphate synthase [Desulfurococcus kamchatkensis
1221n]
gi|218765854|gb|ACL11253.1| undecaprenyl diphosphate synthase [Desulfurococcus kamchatkensis
1221n]
Length = 261
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 126/230 (54%), Gaps = 3/230 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR- 69
P HIGII DGN RWA GL GH G E E++ E+ I+ +TI+ S N R
Sbjct: 31 PRHIGIIPDGNRRWAKRLGLDPSLGHVYGYEKIKEVLKWIWELKIRYVTIYTMSTENCRF 90
Query: 70 RPVSEISELVKLIKSFLK--KGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
R E L L + L K + + ++V+V G+ + +DI+ + E E +T
Sbjct: 91 RDEREREYLFNLARKGLAELKNMREIHERKVRVKVFGSLDLVPEDIVVLASELEKETARY 150
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L IA Y R EI A+K I ++ G + D++ L +KYL T+ PDPDLIIR
Sbjct: 151 DSFQLNIALCYGGRHEIIDAVKAIVKEALEGKIGLEDINEELFSKYLYTNGAPDPDLIIR 210
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
T GE+R+S+FLLWQ AYSE F +WP+F + F+ A+ Y R+RRFG
Sbjct: 211 TSGEERISNFLLWQSAYSELYFCDVFWPEFRKIDFWRAIRSYQRRERRFG 260
>gi|150399407|ref|YP_001323174.1| undecaprenyl diphosphate synthase [Methanococcus vannielii SB]
gi|150012110|gb|ABR54562.1| undecaprenyl diphosphate synthase [Methanococcus vannielii SB]
Length = 264
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/239 (36%), Positives = 135/239 (56%), Gaps = 4/239 (1%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A ++ P H+GIIMDGN R A G GH G E++ +GI +T++A
Sbjct: 25 ARVIKHPLPKHVGIIMDGNRRLAKKIGENPEIGHHLGASKVREVINWCVSLGIHTVTLYA 84
Query: 63 FSINNWRRPVSEISELVKLI-KSFLKKGFYS-LKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FS+ N+ RP E++ L+ L + FL+ + + KN I+V VIG + L + + A
Sbjct: 85 FSLENFERPKDEVNVLMNLFEREFLEIAKHPDIHKNKIQVNVIGRKKLLPKHVQDAINYA 144
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E+QT+ + + A Y + EI ++K I + ++ GS+ +++ LI++ L TS +P
Sbjct: 145 EEQTKFYSDYYVNFAIAYGGQQEIVDSVKKIAKKVKDGSLSIEEINLELISENLYTSHLP 204
Query: 181 --DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+PDLIIRT GE+R+S+FL WQ YSE F YWP F R F ++ +Y R+RR+G
Sbjct: 205 CPNPDLIIRTSGEERISNFLTWQSCYSELYFCETYWPTFRRVDFLRSIREYQKRERRYG 263
>gi|271969714|ref|YP_003343910.1| Z-farnesyl diphosphate synthase [Streptosporangium roseum DSM
43021]
gi|270512889|gb|ACZ91167.1| Z-farnesyl diphosphate synthase [Streptosporangium roseum DSM
43021]
Length = 255
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/239 (38%), Positives = 132/239 (55%), Gaps = 9/239 (3%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
S P H+G+I+DGN RWA + G+ + GHRKG + +E++ E G++ +T++
Sbjct: 20 SRQKEMAPRHVGVIVDGNRRWARSMGIDDVSRGHRKGADKISELLGWCREAGVEVVTVWL 79
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
S N R E+ LVK+I+ +++ L + + +G L D VLK A++
Sbjct: 80 LSSENINRSKDELDLLVKIIEDVVQE----LVADGWHINPMGALDLLPDHTAHVLKNAKE 135
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLDTSD 178
T GL + +A Y R EI+ A++++ Q+ S D+ D IA++L T
Sbjct: 136 ATSHRPGLIVNVAVGYGGRREIADAVRSLLQEHASKGASIEDLVEVLDVEHIAEHLYTRG 195
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDPDL+IRT GE+RLS FLLWQ A+SEF F YWPDF R F AL Y R RR+G
Sbjct: 196 QPDPDLVIRTSGEQRLSGFLLWQSAHSEFYFCEAYWPDFRRVDFLRALRSYAARHRRYG 254
>gi|291295196|ref|YP_003506594.1| undecaprenyl diphosphate synthase [Meiothermus ruber DSM 1279]
gi|290470155|gb|ADD27574.1| undecaprenyl diphosphate synthase [Meiothermus ruber DSM 1279]
Length = 280
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/241 (36%), Positives = 133/241 (55%), Gaps = 6/241 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + P H+G+I+DGN R+A GL GH G++ E++ E+ I +TI+
Sbjct: 39 AEVKKGHTPKHLGLILDGNRRFARELGLDSHQGHEFGVQKAYEVLEWCLELRIPTVTIWV 98
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FS +N+ R +E+ L++L K+ + + N ++V+VIG +L L+E
Sbjct: 99 FSTDNFNRSQTEVETLMQLFVQEAKRMAHDPRIHANEVRVKVIGRHDRFPPKVLEALEEL 158
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIF----QDIESGSVCSHDVDSSLIAKYLDT 176
E T + G+ L IA Y R+EI A+K++ Q +S + ++D I++ L T
Sbjct: 159 EKATEHHNGMLLNIAMGYGGREEIVDAVKSLLLEAAQTGKSPEELAAELDLKHISERLYT 218
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
+ VPDPD IIRT GE RLS FLLWQ AYSE+ F +WP F + F A+ Y R+RRF
Sbjct: 219 AGVPDPDFIIRTSGEIRLSGFLLWQAAYSEYYFFDAFWPAFRKVDFLRAVRDYQKRERRF 278
Query: 237 G 237
G
Sbjct: 279 G 279
>gi|313682235|ref|YP_004059973.1| undecaprenyl pyrophosphate synthetase [Sulfuricurvum kujiense DSM
16994]
gi|313155095|gb|ADR33773.1| Undecaprenyl pyrophosphate synthetase [Sulfuricurvum kujiense DSM
16994]
Length = 225
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/234 (38%), Positives = 127/234 (54%), Gaps = 11/234 (4%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVG-IKNLTIFAFSIN 66
S+ P HI IIMDGNGRWA A+G R GH KG E I A I LT++AFS
Sbjct: 2 SNLPSHIAIIMDGNGRWAEAQGKNRTYGHEKGAETVRAITTYCARHSEIDRLTLYAFSTE 61
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW+RP E+ L+KL++ +LK + + NI+ IG+ + V+ + ++ T
Sbjct: 62 NWKRPKIEVEFLMKLLERYLKSERSTYLEGNIRFEPIGDLSIFSKSLRSVIDDVQNATAQ 121
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
GL +A NY RDEI RA + E+G + + +L + D DL+I
Sbjct: 122 CDGLTQCLALNYGGRDEIVRAANALR---ENGPLSVETLTRALDCTH-------DVDLLI 171
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RTGG+ RLS+FLLWQ AY+E F WP+F+ + + ++ +RRFGGL+
Sbjct: 172 RTGGDHRLSNFLLWQAAYAELFFTKTLWPEFTTDELESIIKKFRTVERRFGGLN 225
>gi|242048354|ref|XP_002461923.1| hypothetical protein SORBIDRAFT_02g010690 [Sorghum bicolor]
gi|241925300|gb|EER98444.1| hypothetical protein SORBIDRAFT_02g010690 [Sorghum bicolor]
Length = 306
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 130/254 (51%), Gaps = 25/254 (9%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P H+ ++MDGN RWA ARG+ GH G + + GI+ LT+FAFS N+
Sbjct: 49 SLPRHVAVVMDGNRRWAQARGMLTAEGHEAGRRALEHTIWRSHAWGIRALTVFAFSQENF 108
Query: 69 RRPVS----------------------EISELVKLIKSFLKKGFYSLKKNNIKVRVIGNR 106
RP + E+ ++ LI+ ++ +N I++ VIG+
Sbjct: 109 GRPKASPTRADLVLTNCSFLHSLNLKMEVDYVMGLIERTIRDNIDEYARNGIRMHVIGDP 168
Query: 107 LSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVD 166
+ +EAE+ TR N+ L+L +A YS R +I RA + + +++ + D+D
Sbjct: 169 SRRPASLQNAAREAEEMTRNNSQLHLMLATCYSGRWDIVRACRELAGEVQGNLLMPEDID 228
Query: 167 SSLIAKYLDTS---DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFF 223
SL+A L T + PDL+IRT GE RLS+FL+WQ AYSE F WPDF +
Sbjct: 229 ESLLASKLATGVAGEFSCPDLVIRTSGEVRLSNFLMWQSAYSELYFTDTLWPDFGEAEYL 288
Query: 224 HALNQYNLRDRRFG 237
AL + R+RRFG
Sbjct: 289 QALTSFQNRERRFG 302
>gi|237753236|ref|ZP_04583716.1| undecaprenyl pyrophosphate synthetase [Helicobacter winghamensis
ATCC BAA-430]
gi|229375503|gb|EEO25594.1| undecaprenyl pyrophosphate synthetase [Helicobacter winghamensis
ATCC BAA-430]
Length = 225
Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 126/233 (54%), Gaps = 13/233 (5%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R GH+ G + EI + GI L+++AFS NW+R
Sbjct: 2 PKHLAIIMDGNGRWAKNHLQMRTFGHKAGAKKIQEITEFCTKYGIAFLSLYAFSTENWKR 61
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGN----RLSLDDDILCVLKEAEDQTRL 126
P +E+ L++L++ +L F + NNI + IG+ L + I + ++Q
Sbjct: 62 PKTEVDFLMRLLEEYLDSKFSTYLNNNIIFKAIGDLSIFSTQLQEKIHSLELVTKEQC-- 119
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
GL +A NY S+DE+ RA + E + DS I LDT+ +P D+++
Sbjct: 120 -NGLTQILALNYGSQDELRRAFLKLVLKQER----NFSFDS--IENALDTTGIPPVDMLV 172
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RTGGE RLS+FLLWQ AY+E F WP F+ + L ++ R RRFGGL
Sbjct: 173 RTGGEMRLSNFLLWQSAYAELFFTKTLWPSFTSKELEAMLLEFKTRHRRFGGL 225
>gi|311898139|dbj|BAJ30547.1| putative undecaprenyl diphosphate synthase [Kitasatospora setae
KM-6054]
Length = 264
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/235 (37%), Positives = 129/235 (54%), Gaps = 9/235 (3%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
++ P HIG+I+DGN RWA A G GH++G + +E + AE ++ +T++ S +N
Sbjct: 33 ANTPHHIGVILDGNRRWAKATGGTTAYGHQRGADKISEFLGWCAETDVQVVTLWMLSTDN 92
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
RP E+ L+ +I+ ++ KV +G L VLK A +T
Sbjct: 93 LARPADELVPLLGIIEDTVRG---LADSGRWKVHPVGALDLLPAKTAGVLKTAAQETEHV 149
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD-----VDSSLIAKYLDTSDVPDP 182
GL + +A Y R EI+ A++++ Q+ +G S + +D IA++L T PDP
Sbjct: 150 DGLTVNVAIGYGGRQEIADAVRSLLQE-HAGRGTSIEELAEILDVEHIAEHLYTKGQPDP 208
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRT GE+RLS FLLWQ A+SEF F YWP F R F AL Y LR+RR G
Sbjct: 209 DLVIRTSGEQRLSGFLLWQSAHSEFYFCEAYWPAFRRVDFLRALRDYQLRNRRMG 263
>gi|118618530|ref|YP_906862.1| Z-decaprenyl diphosphate synthase [Mycobacterium ulcerans Agy99]
gi|183982599|ref|YP_001850890.1| Z-decaprenyl diphosphate synthase [Mycobacterium marinum M]
gi|118570640|gb|ABL05391.1| Z-decaprenyl diphosphate synthase [Mycobacterium ulcerans Agy99]
gi|183175925|gb|ACC41035.1| Z-decaprenyl diphosphate synthase [Mycobacterium marinum M]
Length = 230
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 127/233 (54%), Gaps = 11/233 (4%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M + P ++ + DGNGRWAA RGL GH G EV V A E+G+ +++ FS
Sbjct: 1 MTARRFPLNVAVCPDGNGRWAAQRGLSAMEGHLAGGEVAFNRVRDACELGLTQFSLYGFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW R +E+S L+ + + +G +L+ I+++V+G R+ L ++L + AE T
Sbjct: 61 TENWGRASAEVSGLMDIFSTLFDRGIQALEPLGIRLKVVGARVGLPHNVLDAIDRAEAAT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N + LF+A NY R E+ A + G H + L ++ DPDL
Sbjct: 121 AHNDRMTLFVALNYGGRQEVLDAAERY---TGGGPEAFH--------RLLYAPEMQDPDL 169
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+IRTGG++RLS+ LW+ AYSE +F+ E WPDF+RE +AL ++ R R G
Sbjct: 170 VIRTGGDRRLSNGFLWESAYSELLFLDELWPDFTREHLENALIEFGQRVRTLG 222
>gi|145595958|ref|YP_001160255.1| undecaprenyl diphosphate synthase [Salinispora tropica CNB-440]
gi|145305295|gb|ABP55877.1| Undecaprenyl pyrophosphate synthetase [Salinispora tropica CNB-440]
Length = 270
Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/228 (38%), Positives = 127/228 (55%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ ++MDGNGRWA RGLPR GH G + + A E+GI L+ +AFS NWRR
Sbjct: 33 PRHVAVVMDGNGRWAKERGLPRTKGHEAGEFSLFDAIEGAIELGIPYLSAYAFSTENWRR 92
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + +++ L ++V G L ++ L+ AE+ ++ N+ L
Sbjct: 93 SPDEVRFLMGFNRDVIRRRRDQLVDLGVRVVWSGRSGRLWKSVISELQAAEELSQGNSTL 152
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L NY + EI+ A I +++ +G + V +A+YL +VPD DL +R G
Sbjct: 153 TLQFCVNYGGQAEIADAAAAIAREVAAGRLDPAKVTEKTLARYLYHPEVPDVDLFLRPSG 212
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R S+FLLWQ AY+E VF+ WPDF R ++A Y RDRRFGG
Sbjct: 213 EQRTSNFLLWQSAYAEMVFLDTLWPDFDRRHLWYACELYAQRDRRFGG 260
>gi|42569260|ref|NP_179921.2| dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase,
putative [Arabidopsis thaliana]
gi|330252357|gb|AEC07451.1| cis-prenyltransferase, dehydrodolichyl diphosphate synthase
[Arabidopsis thaliana]
Length = 253
Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/229 (36%), Positives = 121/229 (52%), Gaps = 17/229 (7%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I+DGN RWA GL GH G + EI E+GI ++ FAFS NW R
Sbjct: 37 PRHVSFILDGNRRWAKRDGLTTAQGHEAGTKRIIEIAEVCFELGIHTVSAFAFSTENWGR 96
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ L +LK ++ ++V VIGN+ + + +L + E E+ T+
Sbjct: 97 DKFEVKCLMSLFNHYLKSNIQYFQRKEVRVSVIGNKTKIPESLLKEIHEIEEATKAT--- 153
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT--SDVPDPDLIIRT 188
IS + ++ + E G + DVD +LI + L T SD P PDL+IRT
Sbjct: 154 ------------RISISSWHLVKKSEKGLIREEDVDEALIERELLTNCSDFPSPDLMIRT 201
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
GE+R+S+F LWQ+AY+E + P WPDF ++ AL Y R+RRFG
Sbjct: 202 SGEQRISNFFLWQLAYTELFYSPVLWPDFDKDKLLEALASYQGRERRFG 250
>gi|290956810|ref|YP_003487992.1| biosynthetic transferase [Streptomyces scabiei 87.22]
gi|260646336|emb|CBG69431.1| putative biosynthetic transferase [Streptomyces scabiei 87.22]
Length = 623
Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/230 (37%), Positives = 129/230 (56%), Gaps = 2/230 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I+MDGNGRWA GLPR GHR G ++V A E+G+ +LT++AFS NW+R
Sbjct: 385 PRHVAIVMDGNGRWATGLGLPRDEGHRAGAVALRDVVQGALEIGLAHLTVYAFSTENWKR 444
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+S+L ++++ L G L +++++R +G+ L +D++ VL+ E TR TGL
Sbjct: 445 SPDEVSKLFAIMRAELLDG--ELLDHDVRLRWVGSPDGLPEDVVEVLRAQEHATRNRTGL 502
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ NY R E++RA + + +G V + L A +L +PD DL+ RT G
Sbjct: 503 TFNVCVNYGGRAELARAGAALARAAVAGEVDPARISEQLFAAHLPHHALPDVDLLWRTSG 562
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E R S+FL W Y+E F E WP+ R + A+ Y R RR G S
Sbjct: 563 EIRTSNFLPWHAHYAELHFTDEPWPEVDRRDLWEAVVAYTHRKRRKGAAS 612
>gi|316977558|gb|EFV60643.1| undecaprenyl diphosphate synthase [Trichinella spiralis]
Length = 273
Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/252 (36%), Positives = 148/252 (58%), Gaps = 12/252 (4%)
Query: 1 MVASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
M+A ++S P P HI IMDGN R+A G+ +GH G E + + +VGI+ +T
Sbjct: 16 MMAKLLSLGPIPQHIAFIMDGNRRFATKLGMEATSGHEYGYETLMKTLQWCCKVGIREVT 75
Query: 60 IFAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCV 116
+FA SI N++R +E++ L+ L + + + + S+++N+++ R GN L D+ +
Sbjct: 76 VFALSIENFKRSEAEVNALMNLARVKFTRILETLNSVEENDVRCRFFGNFDYLPGDVREL 135
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIES-GSVCSHD-VDSSLIAKYL 174
++ +TR N GL L I F Y++ DE+ RA +I + ++ G D + LI+K+L
Sbjct: 136 MEAIALKTRENKGLFLNICFPYTAFDELRRACISIMKTFKANGQPVEEDQLTVELISKHL 195
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS-----RELFFHALNQY 229
D+ +PDL+IRT GE RLSDFLLWQ++YS F P WPD+S R + F+ N
Sbjct: 196 DSGCSTEPDLLIRTSGETRLSDFLLWQLSYSCLYFDPVLWPDYSFWNLFRAILFYQQNYE 255
Query: 230 NLRD-RRFGGLS 240
+++ R++G +S
Sbjct: 256 QIQEVRKYGKIS 267
>gi|47085975|ref|NP_998352.1| dehydrodolichyl diphosphate synthase [Danio rerio]
gi|45501137|gb|AAH67175.1| Dehydrodolichyl diphosphate synthase [Danio rerio]
Length = 335
Score = 159 bits (401), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/238 (36%), Positives = 138/238 (57%), Gaps = 4/238 (1%)
Query: 1 MVASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ A+++ + P P H+ IMDGN R+A R GH +G E E + +GI +T
Sbjct: 15 LTANILKAGPMPKHVAFIMDGNRRYAQKEHKERQEGHTQGFEKLAETLRWCLNLGIHEVT 74
Query: 60 IFAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCV 116
++AFSI N++R E+ L++L + S L +L+K+ + +RV+G+ L +D+ +
Sbjct: 75 VYAFSIENFKRSKEEVDGLMELARQKFSRLLTEQENLEKHGVCIRVLGDLTLLPEDLQTL 134
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT 176
+ +A TR + L + F Y+SR EI+ A+K + +E G + S DV L+++ L +
Sbjct: 135 IAKAVVSTRAHNKCFLNVCFAYTSRHEIANAVKEMAWGVEQGLIKSSDVSEVLLSECLYS 194
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
S+ P+PDL+IRT GE RLSDFLLWQ +YS VF WP++S A+ Q+ + R
Sbjct: 195 SNSPNPDLLIRTSGEVRLSDFLLWQTSYSCLVFQSVLWPEYSFWNLCEAILQFQMSHR 252
>gi|302558679|ref|ZP_07311021.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces
griseoflavus Tu4000]
gi|302476297|gb|EFL39390.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces
griseoflavus Tu4000]
Length = 257
Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 87/237 (36%), Positives = 129/237 (54%), Gaps = 9/237 (3%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
++ P HIG+IMDGN RWA A G GHR G + E + +E ++ +T++ S +
Sbjct: 25 TAQVPKHIGVIMDGNRRWAKAAGSSTVHGHRVGADKIGEFLGWCSETDVEVVTLWLLSTD 84
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNN-IKVRVIGNRLSLDDDILCVLKEAEDQTR 125
N+ RP E+ L+ +I+ ++ SL + +V +G R L + LKEAE T
Sbjct: 85 NFDRPKEELVPLLGIIEDVVR----SLAADGRWRVHHVGTRDLLPAGMQTTLKEAEQSTA 140
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSV----CSHDVDSSLIAKYLDTSDVPD 181
G+ + +A Y R EI+ A++++ D + VD +I ++L T PD
Sbjct: 141 DVGGIVVNVAIGYGGRQEIADAVRSMLLDAHDRGTPMDELAEAVDIDMIGRHLYTRAQPD 200
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PDL+IRT GE+RLS F+LWQ A+SE+ F +WP F + F AL Y R RRFGG
Sbjct: 201 PDLVIRTSGEQRLSGFMLWQTAHSEYYFCDVFWPAFRKVDFLRALRDYAARHRRFGG 257
>gi|206895083|ref|YP_002247440.1| di-trans,poly-cis-decaprenylcistransferase [Coprothermobacter
proteolyticus DSM 5265]
gi|206737700|gb|ACI16778.1| di-trans,poly-cis-decaprenylcistransferase [Coprothermobacter
proteolyticus DSM 5265]
Length = 227
Score = 158 bits (400), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 122/228 (53%), Gaps = 4/228 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HIG I+DGN RWA GLP GH G + +K +T + FS NW+R
Sbjct: 4 PNHIGFIVDGNRRWAKEHGLPTFQGHEVGFNKVLLVTDCLLNTDVKQVTYYLFSTENWKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+S L+ L ++ K NI+VR IG + L + ++ E++T+ NTGL
Sbjct: 64 TQEEVSYLMNLGVRMVEAILEPWAKKNIRVRHIGEKDGLPLSVQKAVQRMEERTKSNTGL 123
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ +A NY + EI +A+ + Q E H + I ++L D D+I+RT G
Sbjct: 124 LVNLAINYGGKLEIVQAVNALLQQKEG----LHQISEKDIDEHLYNPDSNPVDVIVRTSG 179
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R+S+FLLWQ AY+E +F+ +YWPD + L ++N R RRFG
Sbjct: 180 EQRISNFLLWQSAYAELIFLSKYWPDIEESDVHYVLEEFNRRQRRFGA 227
>gi|121608414|ref|YP_996221.1| undecaprenyl diphosphate synthase [Verminephrobacter eiseniae
EF01-2]
gi|121553054|gb|ABM57203.1| Undecaprenyl pyrophosphate synthetase [Verminephrobacter eiseniae
EF01-2]
Length = 243
Score = 158 bits (400), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 129/232 (55%), Gaps = 7/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI I+MDGNGRWA R LPR AGH++G+E A + G+ LT+FAFS NW R
Sbjct: 8 PHHIAIVMDGNGRWATRRLLPRLAGHQQGVEALRRCARACVQRGVAVLTVFAFSSENWNR 67
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L+ L + L+K+ +++ +G R L + L +AE T N L
Sbjct: 68 PADEVSGLLELLALALAREVPQLQKDGVRLYFVGARADLAPKVRADLAQAEAATAANARL 127
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + FNY R +I++A + E + + + L + VPDPDL+IRTGG
Sbjct: 128 VLNVCFNYGGRWDIAQAAAALAARGEP-------ITEASLHGALGLAHVPDPDLLIRTGG 180
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ AYSE F WPDF A+ + R+RRFG S +
Sbjct: 181 EMRISNFLLWQAAYSELFFSDRLWPDFDESALDGAIAAFCGRERRFGKTSAQ 232
>gi|117929088|ref|YP_873639.1| undecaprenyl pyrophosphate synthetase [Acidothermus cellulolyticus
11B]
gi|117649551|gb|ABK53653.1| Undecaprenyl pyrophosphate synthetase [Acidothermus cellulolyticus
11B]
Length = 279
Score = 158 bits (400), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 89/241 (36%), Positives = 133/241 (55%), Gaps = 7/241 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ A++ P H+G+I+DGN RW A GL GHR+G E E + A++ I+ +T+
Sbjct: 41 LAATLPPDRIPRHVGVILDGNRRWGRAMGLGASGGHRRGAEKIEEFLGWCADLRIEVVTL 100
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N RP E+ L+++I+ + + S ++ +G L D LKEA
Sbjct: 101 WLLSTDNLARPADELVPLLRIIEETVAELAAS---RRWRLHPVGALDLLPDQTARTLKEA 157
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD--IESGSV--CSHDVDSSLIAKYLDT 176
E T+ GL + +A Y R EI+ A++ + + I S+ ++ +D IA++L T
Sbjct: 158 EHATQDVDGLLVNVAVGYGGRREIADAVRALLHEHAIRGTSIEDLANVLDVEHIARHLYT 217
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
PDPDL+IRT GE+RLS FLLWQ A+SE F WPDF R F A+ Y R+RRF
Sbjct: 218 KGQPDPDLVIRTSGEQRLSGFLLWQSAHSELFFCEALWPDFRRVDFLRAVRAYAQRERRF 277
Query: 237 G 237
G
Sbjct: 278 G 278
>gi|269794157|ref|YP_003313612.1| Undecaprenyl pyrophosphate synthetase [Sanguibacter keddieii DSM
10542]
gi|269096342|gb|ACZ20778.1| Undecaprenyl pyrophosphate synthetase [Sanguibacter keddieii DSM
10542]
Length = 251
Score = 158 bits (399), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 87/241 (36%), Positives = 134/241 (55%), Gaps = 8/241 (3%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
VA + S P P H+G+I+DGN RWA + G P GHR+G + E + + ++GI+ +T+
Sbjct: 13 VAKALRSRPLPRHVGVILDGNRRWAKSFGEPAAHGHRRGADRIEEFLGWSEDLGIEVVTL 72
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N R E+ L+ +I+ + + ++RV+G L +D L+ A
Sbjct: 73 WMLSTDNLSRGADELDALLTIIEDAVAD---LARSRRWRLRVVGRLDLLPEDFAARLRAA 129
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD-IESG---SVCSHDVDSSLIAKYLDT 176
+ +T GL + +A Y R EI+ A++ + E+G + + +D I ++L T
Sbjct: 130 QAETDDVEGLQVNVAIGYGGRHEIADAVRAFLTERAEAGDSLAEVAASIDVDHIGQHLYT 189
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
PDP+L+IRT GE+RLS FLLWQ A SEF F YWPDF R + AL Y+ R+RR
Sbjct: 190 RGQPDPELVIRTSGEQRLSGFLLWQSANSEFYFCEAYWPDFRRVDYLRALRAYSQRERRL 249
Query: 237 G 237
G
Sbjct: 250 G 250
>gi|239929185|ref|ZP_04686138.1| undecaprenyl diphosphate synthase [Streptomyces ghanaensis ATCC
14672]
gi|291437519|ref|ZP_06576909.1| undecaprenyl pyrophosphate synthetase 1 [Streptomyces ghanaensis
ATCC 14672]
gi|291340414|gb|EFE67370.1| undecaprenyl pyrophosphate synthetase 1 [Streptomyces ghanaensis
ATCC 14672]
Length = 257
Score = 158 bits (399), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 128/236 (54%), Gaps = 7/236 (2%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
++ P HIG+IMDGN RWA A G GHR G + E + E ++ +T++ S +
Sbjct: 25 TAQVPKHIGVIMDGNRRWAKAAGSSTVHGHRAGADKIGEFLGWCTETDVEVVTLWLLSTD 84
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
N+ RP E+ L+ +I+ ++ +V +G L + LKEAE+ T
Sbjct: 85 NFDRPKEELVPLLGIIEDVVRT---LAADGRWRVHHVGTLDLLPSGMQTTLKEAEESTAH 141
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDI-ESGSV---CSHDVDSSLIAKYLDTSDVPDP 182
G+ + +A Y R EI+ A++++ D E G+ + VD +I ++L T PDP
Sbjct: 142 VDGIVVNVAIGYGGRQEIADAVRSMLLDAHEKGTSMEELAEAVDVDMIGRHLYTRAQPDP 201
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DL+IRT GE+RLS F+LWQ A+SE+ F +WP F + F AL Y R RR+GG
Sbjct: 202 DLVIRTSGEQRLSGFMLWQTAHSEYYFCEVFWPAFRKVDFLRALRDYAARHRRYGG 257
>gi|157164000|ref|YP_001466585.1| di-trans,poly-cis-decaprenylcistransferase [Campylobacter concisus
13826]
gi|112800724|gb|EAT98068.1| di-trans,poly-cis-decaprenylcistransferase [Campylobacter concisus
13826]
Length = 223
Score = 158 bits (399), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 89/228 (39%), Positives = 133/228 (58%), Gaps = 9/228 (3%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+H+ IIMDGNGRWA RG R GH G V +++ + G+K L+++AFS NW+RP
Sbjct: 5 NHLAIIMDGNGRWAKKRGFLRTNGHEAGANVVSDMCEFCIDNGVKILSLYAFSTENWKRP 64
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E+ L+ L+K FL KN IK IG+ D++ ++ ++ TR NT L
Sbjct: 65 QKEVDFLMNLLKKFLLLKRDDFIKNGIKFNTIGDISPFSDELKNEIEITKNATRENTNLL 124
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L +A NY S+DEI RAIK + ++ +++ + + LD S+ DL+IRTGGE
Sbjct: 125 LNLAINYGSKDEIIRAIKKL-------NLKGCEINETSLNAALDESE--PVDLLIRTGGE 175
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLS+F+LWQ +Y+E F P WPDF ++ + ++ +RRFGG+
Sbjct: 176 SRLSNFMLWQASYAELFFTPTLWPDFGKDELASIVAKFKDIERRFGGV 223
>gi|261402846|ref|YP_003247070.1| undecaprenyl diphosphate synthase [Methanocaldococcus vulcanius M7]
gi|261369839|gb|ACX72588.1| undecaprenyl diphosphate synthase [Methanocaldococcus vulcanius M7]
Length = 262
Score = 158 bits (399), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 138/242 (57%), Gaps = 12/242 (4%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S+ ++ P HI IIMDGN R A G + GH G E E++ + ++GIK +T++AF
Sbjct: 24 SIDKNNLPKHIAIIMDGNRRTAEIYGKDKYYGHYLGAEKVREVLRWSRDLGIKVVTLYAF 83
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSL------KKNNIKVRVIGNRLSLDDDILCVL 117
S N++R E+++L++L +K FY + K ++VR IG L ++ +
Sbjct: 84 STENFKRSEEEVNKLMEL----FEKKFYEIADDEETHKYEVRVRAIGRINLLPKNVQKAI 139
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
K AE +T + IA Y + EI AIK I + ++ G + D++ LI ++L T+
Sbjct: 140 KYAEKKTENYNKFFVNIAIAYGGQQEIIDAIKKIAEKVKRGEIEPEDINKKLIDEHLYTA 199
Query: 178 DVP--DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
++P +PDLIIRT GE+R+S+FL+WQ +YSE F YWP F + F A+ Y R RR
Sbjct: 200 NLPFPNPDLIIRTSGEERISNFLIWQSSYSELYFCDTYWPLFRKIDFLRAVRDYQRRQRR 259
Query: 236 FG 237
FG
Sbjct: 260 FG 261
>gi|297202102|ref|ZP_06919499.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sviceus
ATCC 29083]
gi|197713537|gb|EDY57571.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sviceus
ATCC 29083]
Length = 257
Score = 157 bits (398), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 125/232 (53%), Gaps = 7/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+I+DG+ RWA A G GHR G E E + +E ++ +T++ S +N+ R
Sbjct: 29 PKHIGVIVDGSRRWAKAAGSTPVDGHRAGAEKIEEFLGWCSETDVEVVTLWLLSTDNFNR 88
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ +I+ ++ +V +G L + LKEAE+ T G+
Sbjct: 89 PPEELGPLLGIIEDVVRT---LAADGRWRVHHVGTPDLLPAPMQTALKEAEESTAHVDGI 145
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSDVPDPDLII 186
+ +A Y R EI+ A++++ D + VD +I ++L T D PDPDL+I
Sbjct: 146 LVNVAIGYGGRQEIADAVRSMLLDAHDKGTSMEELAEAVDIDMIGRHLYTGDQPDPDLVI 205
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
RT GE+RLS F+LWQ A+SE+ F +WP F + F AL Y R RR+GG
Sbjct: 206 RTSGEQRLSGFMLWQTAHSEYYFCEVFWPAFRKVDFLRALRDYAARHRRYGG 257
>gi|119715296|ref|YP_922261.1| undecaprenyl pyrophosphate synthetase [Nocardioides sp. JS614]
gi|119535957|gb|ABL80574.1| Undecaprenyl pyrophosphate synthetase [Nocardioides sp. JS614]
Length = 258
Score = 157 bits (398), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 131/242 (54%), Gaps = 7/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M+ M S + P HIG+++DGN RWA A G GH+ G ++ EVG + +T+
Sbjct: 20 MLRRMPSENLPKHIGVMLDGNRRWARAVGRDTADGHQAGAANIEPLLGWCDEVGTEVVTL 79
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N RP E++ L+++I + + +V +G L + LK A
Sbjct: 80 WLLSTDNLNRPERELAPLLEIIADAVDS---LADQRRWRVHPVGALDLLPASVAERLKAA 136
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDT 176
E+ TR G+ + +A Y R EI+ A++++ Q+ ++ S++ IA++L T
Sbjct: 137 EEATRDVDGMLVNVAVGYGGRREIADAVRSLLQEAAVNGTSLEELASAIDVESIAEHLYT 196
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
PDPDL+IRT GE+RL FLLWQ A SEF F YWPDF R F AL Y LR+RR+
Sbjct: 197 KGQPDPDLVIRTSGEQRLGGFLLWQSAKSEFYFCEAYWPDFRRVDFLRALRAYTLRERRY 256
Query: 237 GG 238
G
Sbjct: 257 GA 258
>gi|321460681|gb|EFX71721.1| hypothetical protein DAPPUDRAFT_189103 [Daphnia pulex]
Length = 256
Score = 157 bits (398), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 121/211 (57%), Gaps = 3/211 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IMDGN R+A G+ + GH KG + E++ +GIK +T++AFSI N+RR
Sbjct: 26 PKHIAFIMDGNRRFANKCGVKKIEGHSKGFDKLTEVLQWCLLLGIKEVTVYAFSIENFRR 85
Query: 71 PVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
E+ +L+ L + K+ L ++ I +RVIGN L D+ ++ E+ + T+LN
Sbjct: 86 SQEEVDQLMSLAREKFKRLLEEKDKLNEHGIGIRVIGNMALLPTDLQKLVVESMESTKLN 145
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T L IAF+Y+SR+E++ AI + + + D+D LI K L T PDL+IR
Sbjct: 146 TKAILNIAFSYTSREEMTHAISEVAWGVHEDLLKIEDIDEDLIQKCLYTRHSLQPDLLIR 205
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS 218
+ GE RLSDFLLWQ F P WP+F+
Sbjct: 206 SSGEVRLSDFLLWQTTCCTLYFTPVLWPEFT 236
>gi|253744438|gb|EET00652.1| Undecaprenyl pyrophosphate synthase [Giardia intestinalis ATCC
50581]
Length = 240
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 135/238 (56%), Gaps = 13/238 (5%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA + R GH++G+ +V E I LTI+AFS+ NW R
Sbjct: 3 PTHVAVIMDGNGRWARRQMQERTFGHKQGVTALESVVDECIEREISFLTIYAFSMENWSR 62
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS-LDDDILCVLKEAEDQTRLNTG 129
P +E+S L+ L+ + +++ + + N+KV+ G R + + + ++ + E T TG
Sbjct: 63 PPAEVSFLLDLLDATIQRVRATYQAKNVKVQFCGERTTQIPEKVINAMDCIERDTAKCTG 122
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----------IAKYLDTSDV 179
L L I FNY + EI++A ++I + G ++ + L I +L + +
Sbjct: 123 LVLSICFNYGGQVEIAQACRSILAECLDGDA-VENIKTQLQMPLEQFVQQIGAHL-YAQL 180
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
P DL+IRTG EKRLS+F+ W +AY+E +F WP+F+ E F + LN++ R RRFG
Sbjct: 181 PPVDLLIRTGCEKRLSNFIPWHLAYAEIIFSDLLWPEFTVEDFRNCLNEFASRTRRFG 238
>gi|254456397|ref|ZP_05069826.1| undecaprenyl pyrophosphate synthetase 1 [Candidatus Pelagibacter
sp. HTCC7211]
gi|207083399|gb|EDZ60825.1| undecaprenyl pyrophosphate synthetase 1 [Candidatus Pelagibacter
sp. HTCC7211]
Length = 214
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/222 (37%), Positives = 126/222 (56%), Gaps = 8/222 (3%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRW + R AGH+ G++ I+ + E IK LT+FAFS NW+RP EI
Sbjct: 1 MDGNGRWGLKQKKSRNAGHKAGLKSVERIIKKSIEYNIKFLTLFAFSTENWKRPKKEIDY 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L L++SFL K +IK +VIG + + + +L AE +T N+ + + +A N
Sbjct: 61 LFNLLESFLISRIDEFDKQDIKFKVIGKK-NFSKKLNLLLNSAEKKTSKNSKIQINLALN 119
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y S+ E+ A + + ++D I K+L T ++P+PD++IRTG KRLS+F
Sbjct: 120 YGSKFELVNA-------FKKIIKNNINIDEKNIEKFLYTKNIPNPDILIRTGNTKRLSNF 172
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
LLWQ+AYSE F + WPDF+ + +N++ R +G +
Sbjct: 173 LLWQIAYSEIFFEKKLWPDFNETDYSKIINKFKKVKRNYGNI 214
>gi|29829779|ref|NP_824413.1| undecaprenyl diphosphate synthase [Streptomyces avermitilis
MA-4680]
gi|42559954|sp|Q82IC1|UPPS1_STRAW RecName: Full=Undecaprenyl pyrophosphate synthase 1; Short=UPP
synthase 1; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase 1;
AltName: Full=Undecaprenyl diphosphate synthase 1;
Short=UDS 1
gi|29606888|dbj|BAC70948.1| putative undecaprenyl diphosphate synthase [Streptomyces
avermitilis MA-4680]
Length = 257
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 122/231 (52%), Gaps = 7/231 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+IMDGN RWA A G GHR G + E + +E + +T++ S +N+ R
Sbjct: 29 PKHIGVIMDGNRRWAKAAGSTTAQGHRAGADKIEEFLGWCSETDVGVVTLWLLSTDNFDR 88
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ +I+ ++ +V +G L + LKEAE+ T G+
Sbjct: 89 PQEELGPLLGIIEGVVRT---LAADGRWRVHHVGTPDILPSQMQNALKEAEETTAHVDGI 145
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSDVPDPDLII 186
+ +A Y R EI+ A++++ D D VD LI K+L T PDPDL+I
Sbjct: 146 LVNVAIGYGGRQEIADAVRSMLLDAHEKGTSIPDLADAVDVDLIGKHLYTGAQPDPDLVI 205
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE+RLS F+LWQ A+SE+ F +WP F + F AL Y R RR+G
Sbjct: 206 RTSGEQRLSGFMLWQTAHSEYYFCEVFWPAFRKVDFLRALRDYAARHRRYG 256
>gi|327310211|ref|YP_004337108.1| undecaprenyl diphosphate synthase [Thermoproteus uzoniensis 768-20]
gi|326946690|gb|AEA11796.1| undecaprenyl diphosphate synthase [Thermoproteus uzoniensis 768-20]
Length = 234
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/237 (38%), Positives = 134/237 (56%), Gaps = 9/237 (3%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEV-GIKNLTIFAFS 64
MS+ P HI +I DGN R+A GL +R G+E + E I+++T FA S
Sbjct: 1 MSAELPRHIAVIPDGNRRYARKYGLSLVEAYRHGVEKVRKFATWVLEYRDIRHMTFFALS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
N +R +E+ L ++ K+ +++ + +N ++VR IG+R L D++ ++ ED
Sbjct: 61 TENLQRSRAELEVLFRIFKNEIRRTQEDPIIHENKVRVRFIGDRSLLPQDLVKEMERLED 120
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV--P 180
T + +L +A Y R EI R IK I SG V VD + + + LDTS + P
Sbjct: 121 ITSSYSDYDLTLALGYGGRAEIVRCIKRII----SGEVRLEAVDENSLFRCLDTSYLKHP 176
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+PD++IRTGGEKRLS+FLL+Q AYSE F+ +YWP+ RE L +Y R RRFG
Sbjct: 177 EPDVLIRTGGEKRLSNFLLYQTAYSELFFLDKYWPEIEREDLRAVLEEYATRQRRFG 233
>gi|159905711|ref|YP_001549373.1| undecaprenyl diphosphate synthase [Methanococcus maripaludis C6]
gi|159887204|gb|ABX02141.1| undecaprenyl diphosphate synthase [Methanococcus maripaludis C6]
Length = 264
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/241 (36%), Positives = 136/241 (56%), Gaps = 5/241 (2%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ S S P P H+GIIMDGN R A G GH G +E++ +GI +T+
Sbjct: 23 LESKTSKYPLPKHVGIIMDGNRRLAKKLGENPELGHNLGASKVHEVIDWCVSLGIPTITL 82
Query: 61 FAFSINNWRRPVSEISELVKLI-KSFLKKGFYS-LKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFS+ N+ RP E+ L+ L K FL+ + + KN I+V VIG R L + + +
Sbjct: 83 YAFSLENFNRPEKEVKVLMDLFEKEFLEIADHPDIHKNKIRVSVIGRREMLPEYVQKAIS 142
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
AED+T+ + + A Y + EI ++K I + +++ + D++ LI+K L TS+
Sbjct: 143 YAEDRTKEYSDYFVNFAIAYGGQQEIIDSVKKIAEKVKNNEIEIEDINVELISKNLYTSN 202
Query: 179 VP--DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
+P +PDLIIRT GE+R+S+FL WQ YSE F YWP F + ++ +Y R+RR+
Sbjct: 203 LPSPNPDLIIRTSGEERISNFLTWQSCYSELYFCETYWPTFRKVDLLRSIREYQKRERRY 262
Query: 237 G 237
G
Sbjct: 263 G 263
>gi|284113717|ref|ZP_06386627.1| Di-trans-poly-cis-decaprenylcistransferase [Candidatus Poribacteria
sp. WGA-A3]
gi|283829643|gb|EFC33975.1| Di-trans-poly-cis-decaprenylcistransferase [Candidatus Poribacteria
sp. WGA-A3]
Length = 267
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/234 (39%), Positives = 132/234 (56%), Gaps = 7/234 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HIG+I+DGN R+A A GL GH +G E++ E+G++ +I+ FS++N++
Sbjct: 33 PRHIGVILDGNRRYAKASGLEDIIDGHYEGANKLEEVLHWCDELGVEIFSIWIFSLDNFK 92
Query: 70 RPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
R E+ ++ LI+ +++ L KN IKVR +G L + ++EAE+ T+
Sbjct: 93 RAAHEVEGILGLIERKMRELVTIEGLHKNQIKVRAMGQIELLPTSLQEAIREAEEATQHY 152
Query: 128 TGLNLFIAFNYSSRDEISRAIK-NIFQDIESGSVCSHDVDSSLIAK---YLDTSDVPDPD 183
L +A Y R+EI A + ++ + ESG D + K YL TS++PDP+
Sbjct: 153 DKFILNVAVAYGGREEIIEAFRGHLKAESESGKPIHQVADELTVDKITPYLYTSNLPDPE 212
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
LIIRT GE RLS FLLWQ YSEF F YWP F + F AL Y+ R RRFG
Sbjct: 213 LIIRTSGEVRLSGFLLWQSVYSEFYFCDTYWPSFRKIDFLRALRAYSQRKRRFG 266
>gi|118602086|ref|YP_903301.1| undecaprenyl pyrophosphate synthetase [Candidatus Ruthia magnifica
str. Cm (Calyptogena magnifica)]
gi|118567025|gb|ABL01830.1| Undecaprenyl pyrophosphate synthetase [Candidatus Ruthia magnifica
str. Cm (Calyptogena magnifica)]
Length = 248
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 123/211 (58%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S HI IIMDGNGRWA+ LPR GH++GI+ + +V A GIK LT+FAFS N
Sbjct: 12 STLKHIAIIMDGNGRWASKHSLPRILGHQQGIKAVHGVVKACVIRGIKTLTLFAFSSENK 71
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
R E+S L KL LK+ L ++NI++++IG+ I +A+ N
Sbjct: 72 NRSTEEVSLLFKLFLGVLKQEVKKLNEHNIRLKIIGDMSLFPAKIQQTALDAQALLASNI 131
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL L IA NY + +I++A I + G + + +++ ++YL +D P+ DL+IRT
Sbjct: 132 GLTLVIAANYGGQWDIAQAAAKIAKAAIDGDIKASNINIDSFSQYLSLADEPNVDLLIRT 191
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSR 219
GE R+S+FLLW +AYSEF F WPDF+
Sbjct: 192 SGELRISNFLLWDIAYSEFYFTETLWPDFNE 222
>gi|327285394|ref|XP_003227419.1| PREDICTED: dehydrodolichyl diphosphate synthase-like [Anolis
carolinensis]
Length = 333
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 137/234 (58%), Gaps = 4/234 (1%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
AS++ + P P HI IMDGN R+A + + GH +G + + +G++ +T+
Sbjct: 16 CASVIKAGPMPKHIAFIMDGNRRYAQKHKVKKLEGHSQGFAKLAQTLQWCLSLGVREVTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++RP E+ L++L + + L + +L+K+ + VR++G+ L DI ++
Sbjct: 76 YAFSIENFKRPREEVDGLMQLAREKFTRLLEEQENLEKHGVCVRILGDLPLLPRDIQELI 135
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+ T+ L IAF Y+SR+EIS A+K + +E G + DV SLI K L +S
Sbjct: 136 AKVVLATKQYNTCFLNIAFAYTSREEISNAVKELAWGVEEGLLQPSDVSESLIDKCLYSS 195
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
P PD++IRT GE RLSDF+LWQ ++S VF P WP++S + A+ Q+ +
Sbjct: 196 KSPHPDILIRTSGEVRLSDFMLWQTSHSCLVFQPVLWPEYSFWNLWEAILQFQM 249
>gi|312138738|ref|YP_004006074.1| undecaprenyl diphosphate synthase [Rhodococcus equi 103S]
gi|311888077|emb|CBH47389.1| undecaprenyl diphosphate synthase [Rhodococcus equi 103S]
Length = 255
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 126/232 (54%), Gaps = 7/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ ++ DGN RWA G + GHR G E++ GI+ TI+ S N R
Sbjct: 25 PRHVAVMCDGNRRWARENGFTDVSHGHRMGARKIAELLRWCDAAGIEMATIYLLSTENLR 84
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ L+++I +++ S N V+++G L +D L+EA D TR TG
Sbjct: 85 REPEELDTLLEIITEVVEE--ISGPGKNWSVKIVGTLDLLPEDQARRLREAADGTRGRTG 142
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDVPDPDLI 185
++ +A Y R EI+ A++++ +D + + D+ ++ I +L TS PDPDL+
Sbjct: 143 THVNVAVGYGGRQEIADAVQSLLRDKLAAGLTGDDLVKAMSVEGIDGHLYTSGQPDPDLV 202
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRT GE+RLS FLLWQ AYSE F YWP+F R F AL Y R RRFG
Sbjct: 203 IRTSGEQRLSGFLLWQSAYSEIWFTEAYWPEFRRVDFLRALRDYAARHRRFG 254
>gi|94984129|ref|YP_603493.1| undecaprenyl diphosphate synthase [Deinococcus geothermalis DSM
11300]
gi|94554410|gb|ABF44324.1| undecaprenyl diphosphate synthase [Deinococcus geothermalis DSM
11300]
Length = 276
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/233 (37%), Positives = 127/233 (54%), Gaps = 6/233 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+G+I+DGN R+A A G+ R GH G++ +E++ E+GI +TI+ S +N R
Sbjct: 43 PRHLGLILDGNRRYARALGVEREMGHEFGVDKAHEVLQWCLELGIPAVTIWVLSTDNTGR 102
Query: 71 PVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+E+ L+ L + + N ++VR IG ++L L+E E++T
Sbjct: 103 DPAEVRHLMALFDREARNLARDPRIHANRVRVRAIGQHQGFPGNVLEALRELEEKTAEYN 162
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDVPDPDL 184
G+ L IA Y R+EI A+K + + DV ++L I+ +L T+ PDPD
Sbjct: 163 GMLLNIAVGYGGREEIVDAVKQHLAEQAAAGASLEDVIAALKPEHISAHLYTAGTPDPDF 222
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IIRT GE RLS F+LWQ YSE+ F YWP F R F AL + R+RRFG
Sbjct: 223 IIRTSGEIRLSGFMLWQSVYSEYYFCDVYWPGFRRVDFLRALRDFQGRERRFG 275
>gi|152965074|ref|YP_001360858.1| undecaprenyl diphosphate synthase [Kineococcus radiotolerans
SRS30216]
gi|151359591|gb|ABS02594.1| undecaprenyl diphosphate synthase [Kineococcus radiotolerans
SRS30216]
Length = 253
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/239 (37%), Positives = 132/239 (55%), Gaps = 7/239 (2%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S+ S + P H+GII+DGN RWA A G P GHR G + E++ A+ GI+ +T++
Sbjct: 18 SLDSDALPRHVGIILDGNRRWAKAFGAPSSHGHRAGADKVVEVMEWCADEGIEVVTLYLL 77
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S +N RP E+ L+++++ + + + KV +G+ L D L+E +
Sbjct: 78 STDNLSRPAEELEPLIEIVEDAVAR---VAARRRWKVHPVGSLELLPDASAARLRELAEA 134
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIF-QDIESGSVC---SHDVDSSLIAKYLDTSDV 179
T T + +A Y R EI+ A++++ + E G+ + +D IA +L T
Sbjct: 135 TAGITSGVVNVAIGYGGRQEIAAAVRSLLLEHAERGTTLEELAEVLDVEHIAAHLYTKGQ 194
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PDPDL+IRT GE+RLS FLLWQ A+SEF F WPDF + F AL Y R+RRFG
Sbjct: 195 PDPDLVIRTSGEQRLSGFLLWQSAHSEFFFTEVLWPDFRKVDFLRALRAYAARERRFGA 253
>gi|302551198|ref|ZP_07303540.1| long-chain Z-isoprenyl diphosphate synthase [Streptomyces
viridochromogenes DSM 40736]
gi|302468816|gb|EFL31909.1| long-chain Z-isoprenyl diphosphate synthase [Streptomyces
viridochromogenes DSM 40736]
Length = 596
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 129/233 (55%), Gaps = 2/233 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA RGLPR GHR G E+V A ++G+++LT++ FS NW R
Sbjct: 365 PTHVAVIMDGNGRWAQRRGLPRHEGHRAGAAAVREVVHGALDIGLRHLTLYTFSTENWNR 424
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ ++ L++S + + + ++++R G L D++ +L E TR TGL
Sbjct: 425 GAQEVDAILGLLRSEVADDPFG--ELDVRLRWHGRARRLPSDLVELLHLRERTTRTRTGL 482
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L + +Y RDE++R + + + +G + + A++L D+PD DL+ RTG
Sbjct: 483 TLTMCIDYGGRDELTRTAAALARRVRAGHLDPDLITEEDFARHLPHPDMPDVDLLWRTGN 542
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
E+R S+FL W AY+E F PE WPD R + A+ Y R RR G G
Sbjct: 543 EQRTSNFLPWHTAYAELHFTPELWPDVDRRHLWQAITTYTHRQRRHGTAPGDG 595
>gi|254390203|ref|ZP_05005422.1| undecaprenyl pyrophosphate synthetase [Streptomyces clavuligerus
ATCC 27064]
gi|294814762|ref|ZP_06773405.1| Undecaprenyl pyrophosphate synthetase 1 [Streptomyces clavuligerus
ATCC 27064]
gi|326443141|ref|ZP_08217875.1| undecaprenyl pyrophosphate synthase [Streptomyces clavuligerus ATCC
27064]
gi|197703909|gb|EDY49721.1| undecaprenyl pyrophosphate synthetase [Streptomyces clavuligerus
ATCC 27064]
gi|294327361|gb|EFG09004.1| Undecaprenyl pyrophosphate synthetase 1 [Streptomyces clavuligerus
ATCC 27064]
Length = 256
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 128/231 (55%), Gaps = 7/231 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+I+DGN RWA A G AGH+ G E++ AE ++ +T++ S +N R
Sbjct: 28 PKHIGVILDGNRRWAKASGGTPEAGHKAGASKIQELLGWCAETDVEVVTLWLLSTDNLDR 87
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ +I+ ++ +V +G L VLKEAE T +TG+
Sbjct: 88 PEDELVPLLGIIEDAVRA---LAADGRWRVHHVGTLDLLPSRTQLVLKEAEQDTLDHTGI 144
Query: 131 NLFIAFNYSSRDEISRAIKNIFQD-IESGSVC---SHDVDSSLIAKYLDTSDVPDPDLII 186
+ +A Y R EI+ A++++ D E G+ + VD LI+K+L T PDPDL+I
Sbjct: 145 LVNVAVGYGGRQEIADAVRSLLLDHAERGTSVEELAETVDVDLISKHLYTRGQPDPDLVI 204
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE+RLS F+LWQ A+SE+ F +WP F + F AL Y R RR+G
Sbjct: 205 RTSGEQRLSGFMLWQSAHSEYYFCEVFWPAFRKVDFLRALRDYAARHRRYG 255
>gi|296109429|ref|YP_003616378.1| undecaprenyl diphosphate synthase [Methanocaldococcus infernus ME]
gi|295434243|gb|ADG13414.1| undecaprenyl diphosphate synthase [Methanocaldococcus infernus ME]
Length = 266
Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/235 (35%), Positives = 135/235 (57%), Gaps = 13/235 (5%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGN R G + GH+ G + E++ E+G+K +T+++FSI N+ R
Sbjct: 36 PKHIGIIMDGNRRLGQILG-NKIEGHKLGAKKVKEVLRWCLELGVKVVTLYSFSIENFNR 94
Query: 71 PVSEISELVKLIKSFLKKGFYS------LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
P E+ L+ L K+ FY + K ++++ IG L +D+ ++ AE++T
Sbjct: 95 PKDEVEALMNL----FKEKFYEAAENRDIHKYKVRIKAIGRLDLLPEDVREAIRYAEEKT 150
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP-- 182
+ + + +A Y + EI A++ I + ++ G + +++ LI K+L T+ +P P
Sbjct: 151 KHYSNYYINVAIAYGGQQEIVDAVRKIAEKVKRGEIEPEEINKELIDKHLYTAHLPYPYP 210
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DLIIRT GE+R+S+FL+WQ +YSE F YWP F R A+ +Y R+RRFG
Sbjct: 211 DLIIRTSGEERISNFLIWQSSYSELYFCDVYWPLFRRIDLLRAIREYQRRERRFG 265
>gi|319441740|ref|ZP_07990896.1| hypothetical protein CvarD4_08237 [Corynebacterium variabile DSM
44702]
Length = 251
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/242 (35%), Positives = 128/242 (52%), Gaps = 7/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLT 59
++ M P H+ I+ DGN RWA G GHR G + E+V E GI +T
Sbjct: 11 LIRFMKGRPRPSHVAIMCDGNRRWARENGFTDVTHGHRVGAKKIVEVVGWCEEQGIDTVT 70
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++ S N R E+ L+++I + + K + ++RVIG L ++ L E
Sbjct: 71 VYLLSTENLGRGADELELLMEIIGDVSDE--IASAKGDFRLRVIGRAELLPQELCDRLSE 128
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLD 175
AE++TR N G+ + IA Y R E+ A++ + ++ V + ++ + + ++L
Sbjct: 129 AEERTRDNKGVRVNIAVGYGGRQEVVDAVRELIGNLAGEGVSAAEIPDRITVDSLTEHLY 188
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
TS PDPDL+IRT GE+RLS FLLWQ AYSE F YWP F R F AL ++ R RR
Sbjct: 189 TSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEIWFTETYWPAFRRMDFLRALRDFSTRQRR 248
Query: 236 FG 237
FG
Sbjct: 249 FG 250
>gi|225022973|ref|ZP_03712165.1| hypothetical protein CORMATOL_03019 [Corynebacterium matruchotii
ATCC 33806]
gi|224944196|gb|EEG25405.1| hypothetical protein CORMATOL_03019 [Corynebacterium matruchotii
ATCC 33806]
Length = 258
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 129/232 (55%), Gaps = 7/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P+H+ I+ DGN RWA G + GHR G + E+V+ A+ ++ +TI+ S N
Sbjct: 28 PEHVAIMCDGNRRWAREAGFIDVSHGHRVGAKKIGELVSWCADTDVELVTIYLLSTENLG 87
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ L+ +I + + S N +VR++G+ L + I L + +QT+ NTG
Sbjct: 88 RDAEELQLLLDIICDVVAE--LSTPHRNCRVRLVGHLNLLPEHISHRLSVSSEQTKTNTG 145
Query: 130 LNLFIAFNYSSRDEISRAIKN-IFQDIESGSVCSH---DVDSSLIAKYLDTSDVPDPDLI 185
+ + +A Y R EI A+++ I + G+ + V + IA +L TS PDPDL+
Sbjct: 146 VTVNVAVGYGGRQEIVDAVRDFIASEARKGTTTTELVEKVSAEAIASHLYTSGQPDPDLV 205
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRT GE+RLS FLLWQ AYSE F YWP F R F AL +Y+ R RRFG
Sbjct: 206 IRTSGEQRLSGFLLWQSAYSEIWFTDTYWPAFRRLDFLRALREYSKRSRRFG 257
>gi|305681959|ref|ZP_07404763.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
matruchotii ATCC 14266]
gi|305658432|gb|EFM47935.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
matruchotii ATCC 14266]
Length = 258
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 129/232 (55%), Gaps = 7/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P+H+ I+ DGN RWA G + GHR G + E+V+ A+ ++ +TI+ S N
Sbjct: 28 PEHVAIMCDGNRRWAREAGFIDVSHGHRVGAKKIGELVSWCADTDVELVTIYLLSTENLG 87
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ L+ +I + + S N +VR++G+ L + I L + +QT+ NTG
Sbjct: 88 RDAEELQLLLDIICDVVAE--LSAPHRNCRVRLVGHLNLLPEHISHRLSVSSEQTKTNTG 145
Query: 130 LNLFIAFNYSSRDEISRAIKN-IFQDIESGSVCSH---DVDSSLIAKYLDTSDVPDPDLI 185
+ + +A Y R EI A+++ I + G+ + V + IA +L TS PDPDL+
Sbjct: 146 VTVNVAVGYGGRQEIVDAVRDFIASEAREGTTTTELVEKVSAEAIASHLYTSGQPDPDLV 205
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRT GE+RLS FLLWQ AYSE F YWP F R F AL +Y+ R RRFG
Sbjct: 206 IRTSGEQRLSGFLLWQSAYSEIWFTDTYWPAFRRLDFLRALREYSKRSRRFG 257
>gi|297559084|ref|YP_003678058.1| undecaprenyl diphosphate synthase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296843532|gb|ADH65552.1| undecaprenyl diphosphate synthase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 253
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 88/238 (36%), Positives = 127/238 (53%), Gaps = 9/238 (3%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ S P H+G+ MDGN RWA GL GH+ G E++ EVG++ +T++
Sbjct: 19 LTSQEIPRHVGVAMDGNRRWAKVSGLGAAEQGHQAGANKIFELLRWCDEVGVQVVTLWML 78
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S +N R SE+ LV++I+ + + L++ R +G L LKEAE
Sbjct: 79 STDNLSRDESELGPLVRIIEQTIAR----LREEGWNTRPVGALDILPASTAQALKEAETA 134
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDV 179
T N GL + +A Y R EI+ A++++ Q + ++ L IA++L T
Sbjct: 135 TSGNPGLVVNVAVGYGGRREIADAVRSLLQAEAAKGTGIQELAERLDIEDIARHLYTRGQ 194
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDPDL+IRT GE+RLS F+LWQ +SEF F YWP F R F AL Y R+RR+G
Sbjct: 195 PDPDLLIRTSGEQRLSGFMLWQSVHSEFYFCEVYWPAFRRVDFLRALRSYGARNRRYG 252
>gi|170031397|ref|XP_001843572.1| dehydrodolichyl diphosphate synthase [Culex quinquefasciatus]
gi|167869832|gb|EDS33215.1| dehydrodolichyl diphosphate synthase [Culex quinquefasciatus]
Length = 317
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/245 (34%), Positives = 133/245 (54%), Gaps = 4/245 (1%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
V ++ + P P H+ IMDGN R+A + + GH KG + +E + ++GI+ +T+
Sbjct: 26 VIRVLKAGPIPQHVAFIMDGNRRFAQKENIAKAEGHSKGFDKLSETLQWCQDIGIREVTV 85
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+ L + +K L + I +R+IGN L +DI L
Sbjct: 86 YAFSIENFKRTKEEVDTLMSLAREKFRKLLEERDKLHERGICIRIIGNTALLPEDIQRFL 145
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
EA TR NT L +AF+Y+SRDE++ +I+ + + G + D+D L+++ + T
Sbjct: 146 AEAVLITRNNTKAFLNVAFSYTSRDEMAHSIRTVAEGFAQGKLQQDDIDEELLSRCMYTK 205
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+PDL++RT GE RLSDFL WQ + F WPDF+ F A+ Y + G
Sbjct: 206 HGTNPDLLVRTSGEVRLSDFLTWQSESTVIYFTETLWPDFNVWQLFGAVFYYQRCHWQLG 265
Query: 238 GLSKK 242
K+
Sbjct: 266 AGGKR 270
>gi|300934080|ref|ZP_07149336.1| hypothetical protein CresD4_08419 [Corynebacterium resistens DSM
45100]
Length = 278
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 130/232 (56%), Gaps = 7/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ I+ DGN RWA G + GHR G + E+ + E+GI N+T++ S N +
Sbjct: 48 PQHVAIMADGNRRWARENGFTDVSHGHRVGAQKIAELCSWCDELGIPNVTVYLLSTENLK 107
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+S L +I ++ + + + ++R +G L + + L++ + T ++G
Sbjct: 108 RSEEELSLLCNIIGDVSEE--LAKHECDFRLRCVGQLDLLPEPLRTRLEDNQKLTEKHSG 165
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAK----YLDTSDVPDPDLI 185
+ + IA Y R EI A++ + +++ V + D+ + + A+ ++ TSD PDPDL+
Sbjct: 166 VRVNIAVGYGGRQEIVDAVQKLVRELAGRGVAAEDIAAQITAEALGEHMYTSDQPDPDLV 225
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRT GE+RLS FLLWQ AYSE F YWP F R F AL +Y+ R RRFG
Sbjct: 226 IRTSGEQRLSGFLLWQSAYSEIWFTDTYWPAFRRVDFLRALREYSQRHRRFG 277
>gi|284043427|ref|YP_003393767.1| undecaprenyl diphosphate synthase [Conexibacter woesei DSM 14684]
gi|283947648|gb|ADB50392.1| undecaprenyl diphosphate synthase [Conexibacter woesei DSM 14684]
Length = 221
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 123/217 (56%), Gaps = 12/217 (5%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P + II DGNGRWA RGLP GHR G E + AAE+GI+ L+I+AFS NW R
Sbjct: 9 PATVAIITDGNGRWAQQRGLPVWEGHRAGAENVRSRLRDAAELGIEQLSIYAFSTENWTR 68
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS-LDDDILCVLKEAEDQTRLNTG 129
EI+ L+ L++ +++ +L +++R IG R + + D++ ++ AE T+ N
Sbjct: 69 DDDEIAALMGLMRLYIEHETPTLHAEGVRMRFIGRRTAPVPRDVVELMSWAERLTQHNRR 128
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ FI FNY R EI A ++ E+ A L ++ P+++IRTG
Sbjct: 129 ITFFIPFNYGGRAEIVDAARSFTGTTEAE-----------FAAQLYAPELRPPEVVIRTG 177
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHAL 226
GE+R+S++L+W +A S+ VF E WPDF+RE AL
Sbjct: 178 GERRISNYLIWHIATSQLVFRDELWPDFTREALLDAL 214
>gi|149001624|ref|ZP_01826597.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
SP14-BS69]
gi|147760082|gb|EDK67071.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
SP14-BS69]
Length = 198
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 111/198 (56%), Gaps = 4/198 (2%)
Query: 46 IVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGN 105
+ AA ++G+K +T++AFS NW RP E+ ++ L F L NN+K+++IG
Sbjct: 1 MTKAANKLGVKVITVYAFSTENWTRPDQEVKFIMNLPVEFYDNYVPELHANNVKIQMIGE 60
Query: 106 RLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV 165
L L +AE+ T+ NTGL L A NY R EI++A+K I QD+ + D+
Sbjct: 61 TDRLPKQTFEALTKAEELTKNNTGLILNFALNYGGRAEITQALKLISQDVLDAKINPGDI 120
Query: 166 DSSLIAKYLDTSDVP----DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSREL 221
LI YL T +P DPDLIIRT GE RLS+FL WQ AYSE F WPDF
Sbjct: 121 TEELIGNYLFTQHLPKDLRDPDLIIRTSGELRLSNFLPWQGAYSELYFTDTLWPDFDEAA 180
Query: 222 FFHALNQYNLRDRRFGGL 239
A+ YN R RRFGG+
Sbjct: 181 LQEAILAYNRRHRRFGGV 198
>gi|332023727|gb|EGI63951.1| Dehydrodolichyl diphosphate synthase [Acromyrmex echinatior]
Length = 295
Score = 155 bits (392), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 131/234 (55%), Gaps = 6/234 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IMDGN R+A + L + GH KG + E++ ++G+ +T++ FSI N++R
Sbjct: 26 PKHVAFIMDGNRRYANKQNLQKKEGHSKGFDKMTEMLNWCMDLGVVEVTVYTFSIENFKR 85
Query: 71 PVSEISELVKLIKSFLKKGFYSLKK---NNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
E+ +L+ L + K+ +K I VRVIGN + +D+ ++ EA TR N
Sbjct: 86 SKEEVDDLMDLARQKFKRLLEEKEKLMDVGICVRVIGNLSLIPEDLCKLVAEAMTITREN 145
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L +AF Y+SRDEI+ AIK+I Q ++ + D++ LI+ L T P+PDL+IR
Sbjct: 146 NKAFLNLAFAYTSRDEITHAIKDIIQGVKDADILPEDINEDLISDCLYTYKSPNPDLLIR 205
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
T GE R SDFL+WQ++ + F WP+F+ F A+ Y R + L K
Sbjct: 206 TSGETRFSDFLMWQISNTCIYFTEVLWPEFNIWNFLSAIFYYQ---RCYPNLQK 256
>gi|303325663|ref|ZP_07356106.1| di-trans,poly-cis-decaprenylcistransferase [Desulfovibrio sp.
3_1_syn3]
gi|302863579|gb|EFL86510.1| di-trans,poly-cis-decaprenylcistransferase [Desulfovibrio sp.
3_1_syn3]
Length = 216
Score = 155 bits (392), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/204 (39%), Positives = 115/204 (56%), Gaps = 4/204 (1%)
Query: 34 AGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSL 93
AGHR G E +V +GI++LT++AFS NW RP SEIS L L+ FL++ +
Sbjct: 8 AGHRAGAEAVRTVVTECRGLGIRHLTLYAFSSENWNRPKSEISALFSLLLEFLRREVPLM 67
Query: 94 KKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQ 153
++ I ++V+G+ L L+ A +T + L +A NY R E+ RA++ +
Sbjct: 68 EEKGIALKVLGDLEGLPLPQRTALRHAMGRTEAGREMTLNLALNYGGRAELVRAVRGFLR 127
Query: 154 DIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEY 213
D + DV +A+ L T+ PDPDL+IRT GE+RLS++LL+Q AYSE F P
Sbjct: 128 D----NARPEDVTEESLAQGLYTAGQPDPDLLIRTSGEQRLSNYLLYQCAYSELYFTPVP 183
Query: 214 WPDFSRELFFHALNQYNLRDRRFG 237
WPDF + AL Y R RRFG
Sbjct: 184 WPDFGADQLREALAVYAGRSRRFG 207
>gi|302542839|ref|ZP_07295181.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces
hygroscopicus ATCC 53653]
gi|302460457|gb|EFL23550.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces
himastatinicus ATCC 53653]
Length = 253
Score = 155 bits (392), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 125/231 (54%), Gaps = 7/231 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+I+DGN RWA A G GH+ G E++ +E ++ +T++ S +N R
Sbjct: 25 PKHIGVILDGNRRWARASGGTTEQGHKAGASKIQEMLGWCSETDVEVVTLWMLSTDNLDR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ +I+ ++ +V +GNR L VLKEAE T G+
Sbjct: 85 PEEELKPLLSIIEGAVRD---LASDGRWRVHHVGNRDLLPSGTQAVLKEAERDTEHIDGI 141
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSDVPDPDLII 186
+ +A Y R EI+ A++++ D + + VD LIA++L T PDPDL+I
Sbjct: 142 LVNVAVGYGGRQEIADAVRSLLLDHATKGTSFEELAEVVDIDLIAEHLYTRGQPDPDLVI 201
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE+RLS F+LWQ A+SE+ F +WP F + F AL Y R RR+G
Sbjct: 202 RTSGEQRLSGFMLWQSAHSEYYFCEVFWPAFRKVDFLRALRDYAARHRRYG 252
>gi|257077032|ref|ZP_05571393.1| undecaprenyl pyrophosphate synthetase [Ferroplasma acidarmanus
fer1]
Length = 258
Score = 155 bits (392), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 88/239 (36%), Positives = 130/239 (54%), Gaps = 2/239 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + + P H+GII DGN R+A GL GH +G + E++ A EVGI+ +T+
Sbjct: 19 LMEEIRKADVPLHLGIITDGNRRYAREAGLTPNEGHVRGKDKLEEVLDWAMEVGIRIVTV 78
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLK--KNNIKVRVIGNRLSLDDDILCVLK 118
+ FS N++R E++ L LI L+ + KN I+VR+IG+ L + ++ +
Sbjct: 79 YGFSSENFKRDPEEVNFLFDLINDSLRGLLKDDRIFKNQIRVRIIGDFKGLPEYLVNTIH 138
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
+ E T IA Y R EI A+KNI D+ S + D++ L YL +
Sbjct: 139 DVEKITAGFKKFKFNIAIGYGGRQEIIDAVKNIAADVVSKKLKIEDINEKLFRNYLYDNT 198
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+ DPDLI+RT GE+R+S+FLLWQ AYSE F WPD + F A+ Y R RR+G
Sbjct: 199 LTDPDLILRTSGEERISNFLLWQSAYSELYFSDVNWPDLKKLDFLRAIYSYQSRKRRYG 257
>gi|170031395|ref|XP_001843571.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167869831|gb|EDS33214.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 322
Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 84/245 (34%), Positives = 133/245 (54%), Gaps = 4/245 (1%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
V ++ + P P H+ IMDGN R+A + + GH KG + +E + ++GI+ +T+
Sbjct: 26 VIRVLKAGPIPQHVAFIMDGNRRFAQKENIAKAEGHSKGFDKLSETLQWCQDIGIREVTV 85
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+ L + +K L + I +R+IGN L +DI L
Sbjct: 86 YAFSIENFKRTKEEVDTLMSLAREKFRKLLEERDKLHERGICIRIIGNTALLPEDIQRFL 145
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
EA TR NT L +AF+Y+SRDE++ +I+ + + G + D+D L+++ + T
Sbjct: 146 AEAVLITRNNTKAFLNVAFSYTSRDEMAHSIRTVAEGFAQGKLQQDDIDEELLSRCMYTK 205
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+PDL++RT GE RLSDFL WQ + F WPDF+ F A+ Y + G
Sbjct: 206 HGTNPDLLVRTSGEVRLSDFLTWQSESTVIYFTETLWPDFNVWQLFGAVFYYQRCHWQLG 265
Query: 238 GLSKK 242
K+
Sbjct: 266 AGGKR 270
>gi|156544802|ref|XP_001606412.1| PREDICTED: similar to dehydrodolichyl diphosphate synthase
(dedol-pp synthase) [Nasonia vitripennis]
Length = 300
Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 133/232 (57%), Gaps = 3/232 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + + + P H+ IIMDGN R+A G+ R GH KG E E + E GI +T+
Sbjct: 16 VIKILRTGNIPRHVAIIMDGNRRYANKIGVERLEGHSKGFEKLAETLQWCLEFGIPEVTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+ L + ++ L ++ + +R+IGN + D+ ++
Sbjct: 76 YAFSIENFKRSDKEVDGLMDLARRKFQRLLDERDKLMEHGVCIRIIGNLSFVPQDVRSLM 135
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
EA T+ N L +AF+Y+SRDEI+ + +I + +++G + D+D +L +K L T
Sbjct: 136 AEAMRITKDNNKAFLNVAFSYTSRDEITNTVSDIVRHVKNGDITVDDIDENLFSKCLYTH 195
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQY 229
+ DPDL+IRT GE R SDFL+WQ +++ F WP+FS +A+ Y
Sbjct: 196 NSEDPDLLIRTSGEVRFSDFLMWQTSHTCVYFTKVLWPEFSAWDLIYAVFYY 247
>gi|325676569|ref|ZP_08156247.1| undecaprenyl diphosphate synthase [Rhodococcus equi ATCC 33707]
gi|325552747|gb|EGD22431.1| undecaprenyl diphosphate synthase [Rhodococcus equi ATCC 33707]
Length = 255
Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 126/232 (54%), Gaps = 7/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ ++ DGN RWA G + GHR G E++ GI+ TI+ S N R
Sbjct: 25 PRHVAVMCDGNRRWARENGFTDVSHGHRMGARKIAELLRWCDAAGIEMATIYLLSTENLR 84
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ L+++I +++ S N V+++G L +D L+EA + TR TG
Sbjct: 85 REPEELDTLLEIITEVVEE--ISGPGKNWSVKIVGTLDLLPEDQARRLREAAEGTRGRTG 142
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDVPDPDLI 185
++ +A Y R EI+ A++++ +D + + D+ ++ I +L TS PDPDL+
Sbjct: 143 THVNVAVGYGGRQEIADAVQSLLRDKLAAGLTGDDLVKAMSVEGIDGHLYTSGQPDPDLV 202
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRT GE+RLS FLLWQ AYSE F YWP+F R F AL Y R RRFG
Sbjct: 203 IRTSGEQRLSGFLLWQSAYSEIWFTEAYWPEFRRVDFLRALRDYAARHRRFG 254
>gi|72160860|ref|YP_288517.1| undecaprenyl pyrophosphate synthetase [Thermobifida fusca YX]
gi|71914592|gb|AAZ54494.1| Undecaprenyl pyrophosphate synthetase [Thermobifida fusca YX]
Length = 254
Score = 155 bits (391), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 91/239 (38%), Positives = 136/239 (56%), Gaps = 12/239 (5%)
Query: 6 MSSSP-PDHIGIIMDGNGRWAAARGL--PRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+S++P P H+G+I+DGN RWA GL P+ GHR G E E++ EVG++ +T++
Sbjct: 20 LSNAPKPRHVGVILDGNRRWARLSGLSSPK-EGHRAGAEKIFELLDWCDEVGVQVVTLWL 78
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
S +N RP E+ L ++I++ +++ L +V +G L V+KEA
Sbjct: 79 LSTDNLARPPEELEPLFEIIENTVRR----LCNEGRRVNPMGALDLLPASTAQVMKEAGT 134
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSD 178
T N GL + +A Y R EI+ A++++ + + ++ L IAK+L T
Sbjct: 135 TTERNPGLLVNVAVGYGGRREIADAVRSLLLEEAAKGTTLEELAERLDLDDIAKHLYTRG 194
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDPDL+IRT GE+RLS FLLWQ A+SEF F +WP F + F AL Y++R RRFG
Sbjct: 195 QPDPDLLIRTSGEQRLSGFLLWQSAHSEFYFCEVFWPAFRKIDFLRALRSYSVRQRRFG 253
>gi|256824594|ref|YP_003148554.1| Undecaprenyl pyrophosphate synthetase [Kytococcus sedentarius DSM
20547]
gi|256687987|gb|ACV05789.1| Undecaprenyl pyrophosphate synthetase [Kytococcus sedentarius DSM
20547]
Length = 262
Score = 155 bits (391), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 129/232 (55%), Gaps = 9/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+G+++DGN RWA ARG AGHR G E + E+GI+ +T++ S +N +R
Sbjct: 34 PCHVGVMLDGNRRWARARGSDPAAGHRAGAENIEPFLDWCEELGIEVVTLWMLSTDNLQR 93
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNN-IKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
P +E+ L+++I+ K L ++ ++G L D VL++A QT G
Sbjct: 94 PAAELEPLLRIIE----KAVCDLAATGRWRLHLVGALGLLPDASRDVLEDAVRQTAEVDG 149
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSV----CSHDVDSSLIAKYLDTSDVPDPDLI 185
L + +A +Y R EIS A+ + ++ ++ V + + I ++L T PDPDL+
Sbjct: 150 LLVNVAISYGGRQEISDAVAALLREWDACGVSLAEAAERMTPEAIGEHLYTKGQPDPDLV 209
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRT GE+RLS FLLWQ SE+ F YWPDF R F AL Y R+RR+G
Sbjct: 210 IRTSGEQRLSGFLLWQSEKSEYYFCEAYWPDFRRVDFLRALRAYAERERRYG 261
>gi|297618677|ref|YP_003706782.1| undecaprenyl diphosphate synthase [Methanococcus voltae A3]
gi|297377654|gb|ADI35809.1| undecaprenyl diphosphate synthase [Methanococcus voltae A3]
Length = 264
Score = 155 bits (391), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 87/245 (35%), Positives = 135/245 (55%), Gaps = 12/245 (4%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+V + + P H+ +IMDGN R A G+ GH+ G +++ + IK +TI
Sbjct: 23 LVEIISKQNVPKHVAVIMDGNRRAAKLLGIEATNGHQLGANKVKDLIEWCVLLDIKVITI 82
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNN------IKVRVIGNRLSLDDDIL 114
+AFS+ N+ R E+ L+KL +K F +L +N IKV+ IG L + +
Sbjct: 83 YAFSLENFNRSDDEVYTLMKL----FEKEFENLSENKYIYEKGIKVKAIGKLEKLPEKVR 138
Query: 115 CVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYL 174
+++ E T N L IA +Y + EI A+KNI +D++ G++ D++ L++K L
Sbjct: 139 DSIEKVEKLTENNKNYYLNIAISYGGQQEIIDAVKNIAKDVKDGNINIEDINEELVSKNL 198
Query: 175 DTSDVP--DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLR 232
T D+P +PDLIIRT GE+R+S+FL WQ YSE F WP F + F ++ Y R
Sbjct: 199 YTKDLPHPEPDLIIRTSGEERISNFLTWQSCYSELYFCESNWPQFRKVDFLRSIRDYQKR 258
Query: 233 DRRFG 237
+RR+G
Sbjct: 259 NRRYG 263
>gi|258592818|emb|CBE69127.1| Undecaprenyl pyrophosphate synthetase 2 (UPP synthetase 2)
(Di-trans,poly-cis-decaprenylcistransferase 2)
(Undecaprenyl diphosphate synthase 2) (UDS 2) [NC10
bacterium 'Dutch sediment']
Length = 258
Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 91/234 (38%), Positives = 127/234 (54%), Gaps = 7/234 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HIG+I+DGN R+A RG GHR+G E E++ E+ I+ +T++ FS N
Sbjct: 24 PRHIGLILDGNRRYARERGYSTLLEGHRRGAEKLEEVLNWCEELAIRMVTVWIFSTENVS 83
Query: 70 RPVSEISELVKLIKSFLKKGFYSLK--KNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
R E++ L+ LI+ + K + +++R IG L + ++EAED TR
Sbjct: 84 RSQEEVNGLLALIEKKMHDIARDPKVHRKRMRIRAIGKMELLPQSTVKAIQEAEDATRDY 143
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSV----CSHDVDSSLIAKYLDTSDVPDPD 183
L +A Y R EI+ AI + +D + V ++ I KYL T D+PDPD
Sbjct: 144 DAFCLNVAVGYGGRQEIADAIATMLRDKTARMVPLEQIIDEISIDEIGKYLYTYDLPDPD 203
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
LIIRT GE RLS FLLWQ AYSE+ F YWP F + F A+ + R+RRFG
Sbjct: 204 LIIRTSGEVRLSGFLLWQSAYSEYYFCDAYWPVFRKIDFLRAIRSFQQRERRFG 257
>gi|269957412|ref|YP_003327201.1| undecaprenyl diphosphate synthase [Xylanimonas cellulosilytica DSM
15894]
gi|269306093|gb|ACZ31643.1| undecaprenyl diphosphate synthase [Xylanimonas cellulosilytica DSM
15894]
Length = 253
Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 134/241 (55%), Gaps = 7/241 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ AS++ + P H+G+I+DGN RWA + G GHR+G + E + A GI+ +T+
Sbjct: 15 LAASLVPNRLPRHVGVILDGNRRWAKSFGETAATGHRRGADKIAEFLGWAEADGIEVVTL 74
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N R E+ +L+ +I+ ++ G ++ ++RV+G L + + L+EA
Sbjct: 75 WMLSTDNLARSAGELGDLLDIIEDAVR-GLADSRR--WRLRVVGRLDLLPERLAVALREA 131
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVC----SHDVDSSLIAKYLDT 176
++T GL + +A Y R EI+ A++ ++ + + +D IA +L T
Sbjct: 132 AERTAGVRGLQVNVAIGYGGRHEIADAVRAYLREQAAAGTTMAELAETIDVDDIADHLYT 191
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
+ PDP+L+IRT GE+R+ FL+WQ A+SE F YWPDF R F AL + R+RR
Sbjct: 192 AGQPDPELVIRTSGEQRIGGFLMWQSAHSELYFCEAYWPDFRRTDFLRALRDFTRRERRL 251
Query: 237 G 237
G
Sbjct: 252 G 252
>gi|325959853|ref|YP_004291319.1| Undecaprenyl pyrophosphate synthase [Methanobacterium sp. AL-21]
gi|325331285|gb|ADZ10347.1| Undecaprenyl pyrophosphate synthase [Methanobacterium sp. AL-21]
Length = 255
Score = 154 bits (390), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 86/230 (37%), Positives = 129/230 (56%), Gaps = 3/230 (1%)
Query: 11 PDHIGIIMDGNGRWAAARG-LPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IIMDGN R++ +G + GH++GI + + ++ I+ +T++AFSI N+
Sbjct: 25 PKHVAIIMDGNRRFSRIQGNIDAIEGHKRGIGTLEKFLDWCVDLEIEIVTVYAFSIENFN 84
Query: 70 RPVSEISELVKLIKSFLK--KGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
R E+ L+ L K + + KN ++++ +G L +D+ ++ AED T
Sbjct: 85 RTEQEVRGLMNLFKENFEGIAKNEKIHKNKVRIKAVGKMELLPEDVRKAIEIAEDSTADY 144
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+ IA Y R EI AIK I +D+E G V D+D L+ + L T+ + DP+LIIR
Sbjct: 145 HERLVNIAIGYDGRLEIVDAIKKIVKDVEDGKVQIDDIDEKLVNQNLYTAGLDDPNLIIR 204
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
T GE+RLS FLLWQ +YSE F WP+ + F AL Y R+RRFG
Sbjct: 205 TSGEERLSGFLLWQSSYSELYFCDSLWPELRKVDFLRALRSYQQRERRFG 254
>gi|134045278|ref|YP_001096764.1| undecaprenyl pyrophosphate synthetase [Methanococcus maripaludis
C5]
gi|132662903|gb|ABO34549.1| Undecaprenyl pyrophosphate synthetase [Methanococcus maripaludis
C5]
Length = 264
Score = 154 bits (390), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 87/241 (36%), Positives = 135/241 (56%), Gaps = 5/241 (2%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ S +S P P H+GIIMDGN R A G GH G +E++ +GI +T+
Sbjct: 23 LESKISKCPLPKHVGIIMDGNRRLAKKLGENPELGHNLGASKVHEVIDWCVSLGIHTITL 82
Query: 61 FAFSINNWRRPVSEISELVKLI-KSFLKKGFY-SLKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFS+ N+ RP E+ L+ L + F++ + + ++ I+V VIG R L + +
Sbjct: 83 YAFSLENFNRPEHEVKVLMDLFEREFIEIANHPNTHRDKIRVSVIGRREMLPKHVQKAIS 142
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
AED+T+ + + A Y + EI ++K I Q ++ + D+ LI+K L TS+
Sbjct: 143 YAEDETKDYSNHFVNFAIAYGGQQEIIDSVKKIAQQVKINEIGIEDITVELISKNLYTSN 202
Query: 179 VP--DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
+P +PDLIIRT GE+R+S+FL WQ YSE F YWP F + F ++ +Y R+RR+
Sbjct: 203 LPSPNPDLIIRTSGEERISNFLTWQSCYSELYFCETYWPTFRKIDFLRSIREYQKRERRY 262
Query: 237 G 237
G
Sbjct: 263 G 263
>gi|219120083|ref|XP_002180788.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407504|gb|EEC47440.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 266
Score = 154 bits (389), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 83/245 (33%), Positives = 127/245 (51%), Gaps = 16/245 (6%)
Query: 7 SSSP---PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S SP P H+ + DGN RWAAA LP AGH G + ++ + ++ T++ F
Sbjct: 15 SGSPVNLPRHVAFVCDGNSRWAAAHNLPSSAGHIAGADRLIHVLDGLRDRRVQYCTMYGF 74
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDIL-----CVLK 118
S NW+RP E+ +++ ++++ ++ + + N+ VR++G+ LDD L +L+
Sbjct: 75 STENWKRPAHEVRDILNVMETTARRFYNRALEENVCVRLLGD---LDDKRLPKGLTTLLR 131
Query: 119 EAEDQTRLNTG---LNLFIAFNYSSRDEISRAIKNIFQDIESGSV--CSHDVDSSLIAKY 173
+ E T G L +A NY R +I A + + + ++ + D+D +
Sbjct: 132 KLEQDTARKDGEDKFTLCVALNYGGRQDILNASRRLVEAVDDANTEFTIADIDEDAFCSF 191
Query: 174 LDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
L T +PDPDLI+RT GE RLS+FLLW AY+E F WPDF AL Y R
Sbjct: 192 LSTVGIPDPDLIVRTSGESRLSNFLLWNAAYAELYFTTVLWPDFDETALDDALEWYAQRK 251
Query: 234 RRFGG 238
RRFG
Sbjct: 252 RRFGA 256
>gi|307210588|gb|EFN87056.1| Dehydrodolichyl diphosphate synthase [Harpegnathos saltator]
Length = 297
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/229 (35%), Positives = 131/229 (57%), Gaps = 3/229 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M + P H+ IMDGN R+A + + + GH KG + + ++ ++GI +T++AFS
Sbjct: 20 MRTGHVPKHVAFIMDGNRRYANKKHVAKVEGHTKGFNMLADTLSWCTDLGITEMTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R E+ L++L K ++ L + I VR+IGN + +DI ++ +
Sbjct: 80 IENFKRNKEEVDALMELAKQKFERLLEEKDKLMERGICVRIIGNLSLIPEDICKLIAKIM 139
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T+ N L IAF Y+SRDEI+ AIK+I + ++ + D++ LI+ L T + PD
Sbjct: 140 TITKDNNKAFLNIAFAYTSRDEITCAIKDIVKGVKHNEIVPEDINEDLISNCLYTYNSPD 199
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
PDL+IRT GE RLSDFL+WQ++ + F WP+F+ F A+ Y
Sbjct: 200 PDLLIRTSGEVRLSDFLMWQISDTCVYFANVLWPEFTIWDFLSAIFYYQ 248
>gi|239917049|ref|YP_002956607.1| Undecaprenyl pyrophosphate synthetase [Micrococcus luteus NCTC
2665]
gi|281414488|ref|ZP_06246230.1| Undecaprenyl pyrophosphate synthetase [Micrococcus luteus NCTC
2665]
gi|239838256|gb|ACS30053.1| Undecaprenyl pyrophosphate synthetase [Micrococcus luteus NCTC
2665]
Length = 257
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 126/232 (54%), Gaps = 5/232 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+++DGN RWA A G GH+ G E + + E GI +T++ S N RR
Sbjct: 25 PRHIGVLVDGNRRWARAFGASTQQGHQAGAERILDFIGWCDEAGIPVVTLYMLSTENLRR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLK-KNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
P E++ L+++I++ ++ + + + V+ +G L + + L E +QT+ + G
Sbjct: 85 PAEELAPLLEIIQTTAERLAQPAEGRAPVCVQPVGAVDLLPEPMARRLAEVAEQTKDHDG 144
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIE----SGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
+++ +A Y R EI A++ + +D S + + V IA L T PDPDL+
Sbjct: 145 VHVNVAVGYGGRQEILDAVRELLRDEHALGHSAAEVAESVTVEQIADRLYTRGQPDPDLV 204
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRT GE+RLS FLLWQ AYSEF F WP F + F AL Y R RRFG
Sbjct: 205 IRTSGEQRLSGFLLWQSAYSEFYFCEAMWPAFRKVDFLRALRDYGSRQRRFG 256
>gi|45358908|ref|NP_988465.1| undecaprenyl pyrophospahte synthetase-like protein [Methanococcus
maripaludis S2]
gi|45047774|emb|CAF30901.1| undecaprenyl pyrophospahte synthetase related protein
(Di-trans-poly-cis-decaprenylcistransferase)
[Methanococcus maripaludis S2]
Length = 264
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 133/232 (57%), Gaps = 4/232 (1%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
PP H+GIIMDGN R A G GH G +E++ + I +T++AFS+ N+
Sbjct: 32 PPKHVGIIMDGNRRLAKKLGENPELGHNLGASKVHEVIDWCVSLKIPTITLYAFSLENFN 91
Query: 70 RPVSEISELVKLI-KSFLKKGFYS-LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
RP E+ L+ L + F++ + + K+ I+V VIG R L + + + AED+T+
Sbjct: 92 RPEKEVKVLMDLFEREFIEIADHPDVHKDKIRVSVIGRREMLPEYVQKAINYAEDKTKGY 151
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP--DPDLI 185
+ + A Y + EI ++K I + +++G + D++ LI+K L TS++P +PDLI
Sbjct: 152 SDYFVNFAIAYGGQQEIIDSVKKIAKQVKNGEIDIEDINIELISKNLYTSNLPSPNPDLI 211
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRT GE+R+S+FL WQ YSE F YWP F + ++ +Y R+RR+G
Sbjct: 212 IRTSGEERISNFLTWQSCYSELYFCETYWPTFRKVDLLRSIREYQKRERRYG 263
>gi|302759657|ref|XP_002963251.1| hypothetical protein SELMODRAFT_404990 [Selaginella moellendorffii]
gi|300168519|gb|EFJ35122.1| hypothetical protein SELMODRAFT_404990 [Selaginella moellendorffii]
Length = 270
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 134/236 (56%), Gaps = 9/236 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVF----NEIVAAAAEVGIKNLTIFAFSIN 66
P+H+ IIMDGN RWA ARG+ + R E EIV +++ GIK LT+FAFS
Sbjct: 32 PNHVAIIMDGNSRWAKARGIAKERQLRAAAEACYSNAREIVRLSSDWGIKALTLFAFSTE 91
Query: 67 NWRRPVSEISELVKLIKSFLK-KGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
N+ RP E+ + ++ L ++ + I+ R IG+ L + + +A+ T
Sbjct: 92 NFLRPREEVDQWMQQFDRVLSLDDPATILLDGIQFRCIGDTARLPRPLQAKISDAQSITS 151
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYL----DTSDVPD 181
NTG+ L +A Y +++ +A + + +++E G + ++D +AK L DV
Sbjct: 152 GNTGMKLVMAIGYGGHNDLVQACQALAREVEQGKMAVEEIDQINLAKRLMLGERCEDVGA 211
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
P+L++RT GE+RLS+F+LW +AYSE VF + WPDF +E + +AL ++ R R FG
Sbjct: 212 PELLVRTSGEQRLSNFMLWHLAYSELVFEKKLWPDFGKEEYKNALVEFQGRMRTFG 267
>gi|256374863|ref|YP_003098523.1| undecaprenyl diphosphate synthase [Actinosynnema mirum DSM 43827]
gi|255919166|gb|ACU34677.1| undecaprenyl diphosphate synthase [Actinosynnema mirum DSM 43827]
Length = 259
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/234 (38%), Positives = 126/234 (53%), Gaps = 11/234 (4%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+G+++DGN RWA G A GH G E++ + ++ +T++ S +N
Sbjct: 29 PRHVGVVLDGNRRWAKEAGFDDVAHGHLAGARKILELLNWCRDAEVEVVTLWLLSTDNLT 88
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ L+ +I + K + N +VR +G L + L A +TR TG
Sbjct: 89 RPTKELEPLLGIIADIVDK--LAEPANPWQVRHVGALDMLPTETAARLSAASLRTRGRTG 146
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQ-DIESGSVCSH-----DVDSSLIAKYLDTSDVPDPD 183
L + +A Y R EI+ A++ + Q ESG DVD IA++L TS PDPD
Sbjct: 147 LQVNVAVGYGGRQEIADAVRKLLQKHAESGGTIEELAEVLDVDH--IAEHLYTSGQPDPD 204
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
L+IRT GE+RLS F+LWQ A+SEF F YWP+F R F AL Y +R RRFG
Sbjct: 205 LLIRTSGEQRLSGFMLWQSAHSEFWFCEAYWPEFRRTDFLRALRDYAIRHRRFG 258
>gi|269219220|ref|ZP_06163074.1| di-trans,poly-cis-decaprenylcistransferase [Actinomyces sp. oral
taxon 848 str. F0332]
gi|269211367|gb|EEZ77707.1| di-trans,poly-cis-decaprenylcistransferase [Actinomyces sp. oral
taxon 848 str. F0332]
Length = 255
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/241 (32%), Positives = 133/241 (55%), Gaps = 7/241 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + S+ P HIG+++DGN RWA G GHR+G + NE + EVG++ +T+
Sbjct: 17 LMGGLESADLPRHIGVMLDGNRRWAKELGRNASFGHRRGADKINEFLTWCDEVGVQLVTL 76
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N +R EI L+++I + +++ + +++ +GN L + + ++ A
Sbjct: 77 WLLSTDNLKRAREEIDTLLEIIAAAVER---LAAAHTWRLKTVGNLQMLPEPFVSRMEAA 133
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDT 176
E +T G+ + IA Y R EI+ A++++ + + +V S+ I +L T
Sbjct: 134 ESKTSDVKGMQVNIAVGYGGRQEITDAVRSLLAEQATSGKTLAEVARSIKVDDITDHLYT 193
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
PDPDL+IRT GE+R+S F+LWQ ++E F YWPDF + F AL Y R+RR
Sbjct: 194 KGQPDPDLVIRTSGEQRMSGFMLWQTVHTELYFCEAYWPDFRKVDFLRALRDYTQRERRL 253
Query: 237 G 237
G
Sbjct: 254 G 254
>gi|229819580|ref|YP_002881106.1| undecaprenyl diphosphate synthase [Beutenbergia cavernae DSM 12333]
gi|229565493|gb|ACQ79344.1| undecaprenyl diphosphate synthase [Beutenbergia cavernae DSM 12333]
Length = 257
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 134/239 (56%), Gaps = 7/239 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A++ + P H+GII+DGN RWA A G GHR+G + +++ + ++G++ +T++
Sbjct: 21 AALPREAVPHHVGIILDGNRRWARAGGNRAAHGHRRGADKIADVLGWSEDIGVQIVTLWM 80
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
S +N R E+ EL+ +I+ + + S + ++RV+G L + L+ A++
Sbjct: 81 LSTDNLARDPEEVGELLGIIEDAVAELATSRR---WRIRVVGALDLLPESTADRLRAAQE 137
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSD 178
T G+ + +A Y R EI+ A++ + ++ ++ +L IA++L T
Sbjct: 138 LTSDVEGMGVNVAIGYGGRREIADAVRGLLKEHALAGTSIDELAQTLTVEHIAEHLYTKG 197
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDPDL+IRT GE+RL FLLWQ +SEF F YWPDF R F A+ Y +R+RR G
Sbjct: 198 QPDPDLVIRTSGEQRLGGFLLWQSVHSEFYFCEAYWPDFRRVDFLRAVRSYAMRERRMG 256
>gi|20092520|ref|NP_618595.1| di-trans-poly-cis-decaprenylcistransferase [Methanosarcina
acetivorans C2A]
gi|42559838|sp|Q8TJQ7|UPPS_METAC RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|19917790|gb|AAM07075.1| di-trans-poly-cis-decaprenylcistransferase [Methanosarcina
acetivorans C2A]
Length = 298
Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/238 (36%), Positives = 136/238 (57%), Gaps = 11/238 (4%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++SS PDHI +IMDGN R+A RG R GH G EV +++ E+G+K LT++AF
Sbjct: 20 EILSSEIPDHIAVIMDGNRRYAGQRGRTRSFGHAMGAEVTEQVIEWCYEIGVKELTLYAF 79
Query: 64 SINNWRRPVSEISELVKLI-KSFLKKGFYSLKKN---NIKVRVIGNRLSLDDDILCVLKE 119
S N++R E+ L LI + FLK Y+ K+ ++RVIG+R L + +++
Sbjct: 80 STENFQRSEEEVDGLFNLINEKFLK--LYNDKRTYEKETQIRVIGDRTKLPAFLNKSIEK 137
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS-- 177
E T + NL +A Y R +I +A+++I + SG + DVD +LI+K+L +
Sbjct: 138 IEKATETHRKFNLNVAIAYGGRQDIMQAVRDIAACVSSGKLSLEDVDENLISKHLYPAPG 197
Query: 178 -DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFV--FIPEYWPDFSRELFFHALNQYNLR 232
VP+ DLI+RTGG++R+S+FL WQ SE F +WP+F + ++ Y R
Sbjct: 198 VSVPNVDLIVRTGGDERVSNFLPWQANGSECATYFCAPFWPEFRKIDLLRSIRVYQAR 255
>gi|110749872|ref|XP_623758.2| PREDICTED: dehydrodolichyl diphosphate synthase-like [Apis
mellifera]
Length = 295
Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 135/231 (58%), Gaps = 3/231 (1%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + + + P H+ IMDGN R+A+ G+ + GH KG + F E + + GI+ +T +
Sbjct: 17 IKILKAGNIPKHVAFIMDGNRRYASKNGIEKIEGHTKGFDKFAETLQWCMDFGIQEVTFY 76
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLK 118
AFSI N++R E++ L+ L + ++ +KK+ + VR+IGN L ++ ++
Sbjct: 77 AFSIENFKRKREEVNGLLNLAEQKFQRLLDEKDKIKKHGLCVRIIGNFSLLPKNLQELIA 136
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
E T+ + L IAF Y+SRDEI+ AIK++ + ++ G + S D+D L+ L T++
Sbjct: 137 ETMIITKEHKKGFLNIAFAYTSRDEITHAIKDVIEGVQCGDILSEDIDEELVCNCLYTNN 196
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQY 229
+PDL+IRT GE R SDFL+WQ++ + F WP+F+ F +A+ Y
Sbjct: 197 SKNPDLLIRTSGEVRFSDFLMWQISNTCIYFSNVLWPEFNLWEFLNAIFYY 247
>gi|290957833|ref|YP_003489015.1| undecaprenyl pyrophosphate synthetase [Streptomyces scabiei 87.22]
gi|260647359|emb|CBG70464.1| Putative undecaprenyl pyrophosphate synthetase [Streptomyces
scabiei 87.22]
Length = 257
Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 129/233 (55%), Gaps = 9/233 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HIG+I+DG+ RWA A G GH+ G E + E +K +T++ S +N+ R
Sbjct: 29 PEHIGVIVDGSRRWAKAAGSTTMQGHQAGAHKIEEFLGWCTETDVKVVTLWLLSTDNFNR 88
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNN-IKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
P E+ L+ +I+ ++ SL + +V +G L + LKEAE+ T G
Sbjct: 89 PKEELVPLLGIIEDTVR----SLAADGRWRVHHVGALDLLSPGMQRALKEAEESTSDIDG 144
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIE----SGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
+ + +A Y R EI+ A++++ + S + VD +I ++L T D PDPDL+
Sbjct: 145 ILVNVAIGYGGRQEIADAVRSMLLEAHDKGTSMEELAESVDIDMIGRHLYTVDQPDPDLV 204
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
IRT GE+RLS F+LWQ A+SE+ F +WP F + F AL Y +R RRFGG
Sbjct: 205 IRTSGEQRLSGFMLWQTAHSEYYFCDVFWPAFRKVDFLRALRDYAVRGRRFGG 257
>gi|320094365|ref|ZP_08026152.1| undecaprenyl diphosphate synthase [Actinomyces sp. oral taxon 178
str. F0338]
gi|319978698|gb|EFW10254.1| undecaprenyl diphosphate synthase [Actinomyces sp. oral taxon 178
str. F0338]
Length = 253
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/243 (35%), Positives = 131/243 (53%), Gaps = 15/243 (6%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + ++ P HIG+I+DGN RWA + G P GHR G +E + A + G+ +T++
Sbjct: 17 AELATAPIPAHIGVILDGNRRWAKSLGAPASQGHRAGAGKISEFLGWANDAGVSIVTLWL 76
Query: 63 FSINNWRRPVSEISELVKLI----KSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
S +N R E+ EL+++I ++ K+G + L ++G+ L D + L
Sbjct: 77 LSTDNLSRDADELGELLRIICEAVEALAKQGAWRLA-------IVGDLSLLPDGVAADLS 129
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYL 174
+ + T G+ + IA Y R EI+ A++ + ++ + +V S IA +L
Sbjct: 130 RSIEATAGREGMKVNIAVGYGGRHEITEAVRAMMREAAAAGRSLAEVAESFTDQDIASHL 189
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
T D PDPDL+IRT GE+RLS F+LWQ +SE+ F YWPDF R F AL Y R+R
Sbjct: 190 YTKDQPDPDLVIRTSGEQRLSGFMLWQSVHSEYYFCEVYWPDFRRVDFLRALRSYAQRER 249
Query: 235 RFG 237
R G
Sbjct: 250 RLG 252
>gi|327400042|ref|YP_004340881.1| Undecaprenyl pyrophosphate synthase [Archaeoglobus veneficus SNP6]
gi|327315550|gb|AEA46166.1| Undecaprenyl pyrophosphate synthase [Archaeoglobus veneficus SNP6]
Length = 263
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/223 (38%), Positives = 123/223 (55%), Gaps = 3/223 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGN R+A RGLP AGH G E++ E+GIKN+T++AFS N+ R
Sbjct: 23 PNHVAIIMDGNRRFARRRGLPPQAGHVFGSRKAEEVLNWCWELGIKNVTVYAFSTENFNR 82
Query: 71 PVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
E + KL+ L++ + +N +KV+VIG L + + ++E E T+
Sbjct: 83 SEEEKQNIFKLVAKELRRLAKDRRIHRNRVKVKVIGKLEMLPEYVREAIREVEKATQGYG 142
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYL-DTSDVPDPDLIIR 187
NL IA Y R E+ AI+ + D+ G + S D+D+ + KYL D DL+IR
Sbjct: 143 NFNLNIALAYGGRQELIDAIRGVLHDVRRGVLRSRDIDAKTLEKYLYGEGDYASVDLVIR 202
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
TGGE+RLS+FL WQ A S F YWP+F + A+ +
Sbjct: 203 TGGEQRLSNFLPWQTANSVAYFCDAYWPEFRKIDLLRAIRAWQ 245
>gi|308176542|ref|YP_003915948.1| di-trans,poly-cis-decaprenylcistransferase [Arthrobacter
arilaitensis Re117]
gi|307744005|emb|CBT74977.1| di-trans,poly-cis-decaprenylcistransferase [Arthrobacter
arilaitensis Re117]
Length = 253
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/241 (36%), Positives = 128/241 (53%), Gaps = 7/241 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ S+ + P HIG+++DGN RWA G P AGH+ G + E + ++ I+ +T+
Sbjct: 15 LAKSLPADKLPHHIGVMVDGNRRWAKLAGTPTMAGHQAGADKILEFLDWCEDLNIQMVTL 74
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N R SE+ +L+++I S L + + N +KV+ +G + L +D+ L
Sbjct: 75 YMLSTDNLNREASELRDLLEVIGSTLDR---LGETNRVKVQQVGAKDLLPEDLAQKLAAL 131
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDT 176
E T G+++ +A Y R EI A K + D ++ SSL I L T
Sbjct: 132 ETITANRDGVHVNVAIGYGGRREILDAFKALLCDAAKDGRTLEELASSLSTDDIESALYT 191
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
PDPDL+IRT GE+RLS FL WQ AYSEF F WPDF R F AL + R RRF
Sbjct: 192 KGQPDPDLVIRTSGEQRLSGFLTWQSAYSEFYFCEALWPDFRRVDFLRALRDFADRQRRF 251
Query: 237 G 237
G
Sbjct: 252 G 252
>gi|157112048|ref|XP_001657391.1| dehydrodolichyl diphosphate synthase (dedol-pp synthase) [Aedes
aegypti]
gi|108878222|gb|EAT42447.1| dehydrodolichyl diphosphate synthase (dedol-pp synthase) [Aedes
aegypti]
Length = 318
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 130/233 (55%), Gaps = 4/233 (1%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ ++ + P P H+ IMDGN R+A + + GH KG + +E + +VGI+ +T+
Sbjct: 24 IIKVLKAGPVPRHVAFIMDGNRRFARKENIAKAEGHSKGFDKLSETLQWCQDVGIREVTV 83
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+ L + +K L + I +R+IGN L DI +
Sbjct: 84 YAFSIENFKRTKEEVDTLMDLAREKFRKLLEERDKLHERGICIRIIGNMGLLPVDIQHCM 143
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
EA T+ N L +AF+Y+SRDEI+ +I+ + + + G + + D+D ++ + + T
Sbjct: 144 AEAVLLTQNNQNAFLNVAFSYTSRDEIAHSIRVVAEGVRDGQLQARDIDEEVLTRCMYTK 203
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
DPDL++RT GE RLSDFLLWQ + + F WP+FS F A+ Y
Sbjct: 204 QCTDPDLLVRTSGEMRLSDFLLWQSSSTVIYFTKTLWPEFSIWHLFGAVFYYQ 256
>gi|260808570|ref|XP_002599080.1| hypothetical protein BRAFLDRAFT_281462 [Branchiostoma floridae]
gi|229284356|gb|EEN55092.1| hypothetical protein BRAFLDRAFT_281462 [Branchiostoma floridae]
Length = 347
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 131/227 (57%), Gaps = 7/227 (3%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A+++ + P P H+ IMDGN R+A +G+ R GH G E E + ++GI +T+
Sbjct: 23 CANVLKTGPIPKHVAFIMDGNRRFARKKGMDRAEGHLMGFEKLAETLKWCRDLGINEVTV 82
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFY---SLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+++ + + ++ K+ + +RV+GN L DI +
Sbjct: 83 YAFSIENFKRSKEEVESLMEIARQKFARLLQEKDAIMKHGVCIRVLGNLTLLPLDIQRSI 142
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
EA ++ N L + F Y+SR EIS A++ + + +E G + DV SL+ + L TS
Sbjct: 143 AEAMVMSKDNDKAFLNVCFAYTSRHEISNAVEEMAEGVEKGLIRPSDVSESLLDRCLYTS 202
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFH 224
PDP L++RT GE RLSDFLLWQ ++S F+ WP+FS F+H
Sbjct: 203 HSPDPHLLVRTSGEVRLSDFLLWQSSFSVLSFMEVLWPEFS---FWH 246
>gi|307332448|ref|ZP_07611512.1| undecaprenyl diphosphate synthase [Streptomyces violaceusniger Tu
4113]
gi|306881917|gb|EFN13039.1| undecaprenyl diphosphate synthase [Streptomyces violaceusniger Tu
4113]
Length = 262
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 126/231 (54%), Gaps = 7/231 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+I+DGN RWA A G GH+ G E++ +E ++ +T++ S +N R
Sbjct: 34 PKHIGVILDGNRRWARAAGGTAEQGHKAGASKIQELLGWCSETDVEVVTLWLLSTDNLDR 93
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L+ +I+ ++ +V +GNR L VLKEAE T G+
Sbjct: 94 PENELGPLLSIIEGAVRD---LATDGRWRVHHVGNRDLLPSRTQTVLKEAERDTEHIDGI 150
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSDVPDPDLII 186
+ +A Y R EI+ A++++ D + + VD LI+++L T PDPDL+I
Sbjct: 151 LVNVAVGYGGRQEIADAVRSLLLDHATKGTSFEELAEVVDIDLISEHLYTRGQPDPDLVI 210
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE+RLS F+LWQ A+SE+ F +WP F + F AL Y R RR+G
Sbjct: 211 RTSGEQRLSGFMLWQSAHSEYYFCEVFWPAFRKVDFLRALRDYAARHRRYG 261
>gi|586925|sp|P20182|UPPS_STRFR RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
Length = 259
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/239 (37%), Positives = 129/239 (53%), Gaps = 15/239 (6%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN-W 68
P HIG+IMDGN RWA G+ + GHR G E +++ GIK++T+F S N
Sbjct: 25 PKHIGLIMDGNRRWARQMGMANPSIGHRYGAEHVESVLSWCETAGIKHVTVFVCSTENLQ 84
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLD----DDILCVLKEAEDQT 124
RR +E+S L+++I+ + + +VR+ G +LD D LKEA + T
Sbjct: 85 RRGDTEVSFLMQVIEQVVAVHL-ARPDARWQVRIAG---TLDXPCADSTAHALKEAVEAT 140
Query: 125 R-LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDV 179
R TG + +A Y R E+ A++ + + + D+ +SL I ++L T+
Sbjct: 141 RRCTTGSQVTLAIGYGGRQEVIDAVRELLHEQAAAGTTLEDLAASLTMDDITRHLYTAGQ 200
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PDPDL+IRT GE+R+S+FLLWQ AYSE F YWP F F AL Y R RR+G
Sbjct: 201 PDPDLVIRTSGEQRMSNFLLWQSAYSELYFCEAYWPAFREIDFLRALRSYAARQRRYGA 259
>gi|307214675|gb|EFN89604.1| Dehydrodolichyl diphosphate synthase [Harpegnathos saltator]
Length = 304
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 131/228 (57%), Gaps = 3/228 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M + P H+ IMDGN R+A + + + GH KG + E ++ ++GI +T++AFS
Sbjct: 20 MRTGHVPKHVAFIMDGNRRYANKKHVAKVEGHTKGFDKLAETLSWCMDLGITEVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R E+ L++L K ++ L + I VR+IGN + +DI ++ +
Sbjct: 80 IENFKRNKEEVDALMELAKQKFERLLEEKDKLMERGICVRIIGNLSLIPEDICKLIAKIM 139
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T+ N L +AF Y+SRDEI+ AIK+I + ++ + D++ LI+ L T + PD
Sbjct: 140 TITKDNNKAFLNVAFAYTSRDEITCAIKDIVKGVKHNEIVPEDINEDLISNCLYTYNSPD 199
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQY 229
PDL+IRT GE RLSDFL+WQ++ + F WP+F+ F A+ Y
Sbjct: 200 PDLLIRTSGEVRLSDFLMWQISDTCVYFANVLWPEFTIWDFLSAIFYY 247
>gi|171186222|ref|YP_001795141.1| undecaprenyl diphosphate synthase [Thermoproteus neutrophilus
V24Sta]
gi|170935434|gb|ACB40695.1| undecaprenyl diphosphate synthase [Thermoproteus neutrophilus
V24Sta]
Length = 238
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 131/232 (56%), Gaps = 9/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEV-GIKNLTIFAFSINNWR 69
P HI +I DGN R+A GL +++G+E + E+ I+N+T +A S N R
Sbjct: 10 PSHIAVIPDGNRRYAKKAGLDFYHAYKRGVEKVRSFLLWTLELREIRNVTFYALSTENLR 69
Query: 70 RPVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
R E+ L ++ + +K + N +++R IG+R L ++ +++E E TR
Sbjct: 70 RSRLELEILFRIFEEEFRKTLEDPLIHDNRVRIRFIGDRSPLPGRVVKLMEELESVTRNY 129
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP--DPDLI 185
T NL A Y R EI R +K + SG V D++ + + LDT D+P +PD++
Sbjct: 130 TSYNLTFALGYGGRAEIVRCVKRLL----SGEVKIADINEDTLFQCLDTRDLPNPEPDVV 185
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+RTGGEKRLS+FLL+Q AYSE +F+ + WP+ RE + + +Y+ R RRFG
Sbjct: 186 VRTGGEKRLSNFLLYQAAYSELIFLDKLWPEVEREDLAYIVEEYSRRQRRFG 237
>gi|320333090|ref|YP_004169801.1| Undecaprenyl pyrophosphate synthase [Deinococcus maricopensis DSM
21211]
gi|319754379|gb|ADV66136.1| Undecaprenyl pyrophosphate synthase [Deinococcus maricopensis DSM
21211]
Length = 276
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/233 (37%), Positives = 124/233 (53%), Gaps = 6/233 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+G+I+DGN R+A A G+ R G+ GI+ +E++ EVG+ +TI+ S +N +R
Sbjct: 43 PKHLGMILDGNRRYARAMGVGRELGYEFGIDKAHEVLQWCLEVGVPAVTIWVLSTDNVKR 102
Query: 71 PVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
E+ L+ L + + N ++VR IG ++L L E E T
Sbjct: 103 DPDEVRHLMGLFDREARNLARDKRIHANRVRVRAIGQHHDFPVNVLEALSELEAATAHYD 162
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDVPDPDL 184
G+ L IA Y R+EI A++ + + + DV +L ++ +L T+ PDPD
Sbjct: 163 GMLLNIAVGYGGREEIVDAVRTYLRKADEDGLTLRDVADTLNAEHVSAHLYTAGTPDPDF 222
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IIRT GE RLS F+LWQ YSEF F YWP F R F AL + RDRRFG
Sbjct: 223 IIRTSGEIRLSGFMLWQSVYSEFYFCDVYWPGFRRVDFLRALRDFQGRDRRFG 275
>gi|307111872|gb|EFN60106.1| hypothetical protein CHLNCDRAFT_29281 [Chlorella variabilis]
Length = 229
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 119/216 (55%), Gaps = 4/216 (1%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGN RWAAAR P G+++G+E +V + LT++AFS NW RP +E+
Sbjct: 1 MDGNSRWAAARKRPAAFGYQQGVEALRSVVRCCHSWRVPCLTVYAFSAENWARPAAEVDA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ L++ L L +++R IG L + ++ AE T N+ L+L +A +
Sbjct: 61 LLALMERTLAAEVAELAAQGVRLRFIGELGMLPQSLQRQMRSAELATGDNSDLHLTVAVS 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLIIRTGGEKR 193
YS R +++ A++ I + G + DV +LI ++L T +P PDL+IRT GE+R
Sbjct: 121 YSGRQDVTLAVQEIARLAAGGELRPADVTPALIEQHLATRQLPHAWRHPDLLIRTSGERR 180
Query: 194 LSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQY 229
LS+FL W+ AYSE F WPDF + F AL Y
Sbjct: 181 LSNFLTWECAYSELYFSDVMWPDFGEKELFQALEDY 216
>gi|54026792|ref|YP_121034.1| putative undecaprenyl pyrophosphate synthetase [Nocardia farcinica
IFM 10152]
gi|54018300|dbj|BAD59670.1| putative undecaprenyl pyrophosphate synthetase [Nocardia farcinica
IFM 10152]
Length = 262
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/242 (35%), Positives = 132/242 (54%), Gaps = 7/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLT 59
+V + P H+ ++ DGN RWA G + GHR G E+V ++ GI+ +T
Sbjct: 22 LVKQLAGRQHPRHVAVMCDGNRRWARENGFTDVSHGHRVGALKIAELVEWCSQAGIEMVT 81
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++ S N +R E+ L ++I +++ S + + VR++G+ + I ++
Sbjct: 82 VYLLSTENLQRDPEELETLFEVITDVVEE--LSAPERDWSVRIVGSLDGFPELIAKRMRT 139
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDS---SLIAKYLD 175
A +QT G+++ +A Y R EI+ A++++ Q+I +G V S + I ++L
Sbjct: 140 AAEQTEGRRGVHVNVAVGYGGRQEIADAVRSLVRQEIAAGETGEDLVQSITVNAIGQHLY 199
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
TS PDPDL+IRT GE+RLS FLLWQ AYSE F YWP+F R F AL Y R RR
Sbjct: 200 TSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEIWFTEVYWPEFRRVDFLRALRDYAARHRR 259
Query: 236 FG 237
FG
Sbjct: 260 FG 261
>gi|255723455|ref|XP_002546661.1| dehydrodolichyl diphosphate synthetase [Candida tropicalis
MYA-3404]
gi|240130792|gb|EER30355.1| dehydrodolichyl diphosphate synthetase [Candida tropicalis
MYA-3404]
Length = 331
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/243 (35%), Positives = 141/243 (58%), Gaps = 9/243 (3%)
Query: 1 MVASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
M+ ++S+ P P H+GIIMDGN R+A + GH G + I+ E G+K+ T
Sbjct: 21 MLGRIVSTGPVPQHVGIIMDGNRRYAKTHKIEIKEGHSLGFDTMASILELLYESGVKSAT 80
Query: 60 IFAFSINNWRRPVSEISELVKLIKS-FLKKGFYSL--KKNNIKVRVIGNRLSLDDDILCV 116
++AFSI N++R E+ L+ L KS F + + L K+ +K+R++GN+ L D+L +
Sbjct: 81 VYAFSIENFKRSSYEVKWLMDLAKSKFTQINQHGLLCKEYGVKIRILGNKKLLPKDVLEI 140
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT 176
L++ E+ T+ NT L + F Y+SRDE++ +I+ + + G++ ++D S I ++L T
Sbjct: 141 LEQTEEITKDNTRAVLNVCFPYTSRDEMTHSIQEVVDRSKEGNI---EIDESTIDEHLYT 197
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSE--FVFIPEYWPDFSRELFFHALNQYNLRDR 234
+VP DL++RT G RLSDFLLWQ + VF+ + WP FS F L ++
Sbjct: 198 REVPPLDLLVRTSGTYRLSDFLLWQTVSPDCAVVFVDKLWPAFSPWDMFKILINWSFNKY 257
Query: 235 RFG 237
+G
Sbjct: 258 MYG 260
>gi|19115869|ref|NP_594957.1| cis-prenyltransferase (predicted) [Schizosaccharomyces pombe 972h-]
gi|6840813|sp|O14171|YE54_SCHPO RecName: Full=Uncharacterized protein C4D7.04c
gi|4038613|emb|CAB11276.1| cis-prenyltransferase (predicted) [Schizosaccharomyces pombe]
Length = 264
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 132/238 (55%), Gaps = 4/238 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M+ ++ P HI +MDGN RWA R + GH G E ++ ++G+K ++
Sbjct: 25 MINTIKRGKVPQHIAFVMDGNRRWARQRRMETIEGHSSGFEALKSLLKVCLKLGVKEVSA 84
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
F FSI N++R E+ L+++ K+ L + + + I++R++G+ L D+L
Sbjct: 85 FTFSIENFKRSKYEVDMLMEIAKNSLTQITAHGDLVDQYGIRIRIVGDLSRLQPDVLETA 144
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+A + T+ NT L + F Y+SR EI+ ++++I + E G++ D+D + K L
Sbjct: 145 LKAVEITKHNTKATLNVCFPYTSRHEIATSVQSIVKMAEDGTITPEDIDEDIFEKNLLIK 204
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
D DL+IRT G +RLSDF+LWQ +E FI YWPDFS FF L QY L+++
Sbjct: 205 DSLPLDLLIRTSGVERLSDFMLWQCHKNTEIKFIDFYWPDFSIWKFFPMLIQYQLQNQ 262
>gi|291228763|ref|XP_002734350.1| PREDICTED: CG10778-like [Saccoglossus kowalevskii]
Length = 326
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/223 (38%), Positives = 125/223 (56%), Gaps = 3/223 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IMDGN R+A L R GH KG E E + ++GI +T++AFSI N++R
Sbjct: 29 PKHVAFIMDGNRRFARKSSLERQEGHIKGFEKLTETLEWCLDLGITEVTVYAFSIENFKR 88
Query: 71 PVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
E+S L++L + +K ++K + +RV+G+ L +D+ + EA + ++ N
Sbjct: 89 SKEEVSGLMELARQKFEKLLEEKKMIQKYGVCIRVLGDIDLLPNDVKRAVAEAVNFSKHN 148
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L + F Y+SR EIS AIK + +E G + DV L+ K L T P+P+L+IR
Sbjct: 149 NRAILNVCFAYTSRHEISNAIKEMALGVEEGFLRPSDVSEELLEKCLYTGKSPNPELLIR 208
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
T GE RLSDFLLWQ +S F+ WP+FS F A+ Y
Sbjct: 209 TSGEVRLSDFLLWQTTFSVLSFVKVLWPEFSVWHLFAAVLHYQ 251
>gi|134097517|ref|YP_001103178.1| putative undecaprenyl pyrophosphate synthetase [Saccharopolyspora
erythraea NRRL 2338]
gi|291009342|ref|ZP_06567315.1| undecaprenyl pyrophosphate synthetase [Saccharopolyspora erythraea
NRRL 2338]
gi|133910140|emb|CAM00253.1| putative undecaprenyl pyrophosphate synthetase [Saccharopolyspora
erythraea NRRL 2338]
Length = 258
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/235 (36%), Positives = 126/235 (53%), Gaps = 6/235 (2%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P H+G+I+DGN RWA G GHR+G E++ E ++ +T++ S +N
Sbjct: 26 SKSPRHVGVILDGNRRWAKEAGFDVNHGHREGARKIAEMLGWCQEADVEVVTLWLLSTDN 85
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
R E+S L+++I + + + +VR++G L + L A +T+
Sbjct: 86 LNRSSDELSALLEIIAGVVDE--LTEPGKPWRVRIVGALDLLPTETAARLSAAALRTKGR 143
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDVPDPD 183
TG+ + +A Y R EI+ A++ + Q ++ L IA++L TS PDPD
Sbjct: 144 TGMQVNVAVGYGGRQEIADAVRKLLQQHAEAGTTIDELAEVLTVDHIAEHLYTSGQPDPD 203
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L+IRT GE+RLS F+LWQ A+SEF F YWP F R F AL +Y R RRFGG
Sbjct: 204 LLIRTSGEQRLSGFMLWQSAHSEFWFCEAYWPAFRRVDFLRALREYAARHRRFGG 258
>gi|226530156|ref|NP_001151824.1| undecaprenyl pyrophosphate synthetase [Zea mays]
gi|195650007|gb|ACG44471.1| undecaprenyl pyrophosphate synthetase [Zea mays]
Length = 313
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 129/237 (54%), Gaps = 6/237 (2%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ S P H+G+++DG+ RWA ARGL GH G V + GI+ LT+FA S
Sbjct: 74 AESLPRHVGLVIDGHARWARARGLSVSEGHAVGRRTVEHTVRLSRAWGIRVLTVFACSHE 133
Query: 67 NWR-RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED-QT 124
N RP +E+ ++L + F++ + I++ +IG+ L +L +EA T
Sbjct: 134 NMTTRPKAEMDFFMQLYEGFIRDNVDQFCREGIRLHLIGDSPGLPASLLRAAREANQLAT 193
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS----DVP 180
+ + + L +A YS R +I RA + + +++ + D+D +LIA L TS ++
Sbjct: 194 QSESEMVLMLAMGYSGRRDILRACQELATEVQRNLLRPEDIDEALIAGKLGTSIAGGELS 253
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDL+IRT GE RLS+FLLWQ A++E F WPDF + + AL Y R RRFG
Sbjct: 254 YPDLVIRTSGELRLSNFLLWQSAFAELFFSDVMWPDFGEDEYLGALRSYQTRQRRFG 310
>gi|328884741|emb|CCA57980.1| Undecaprenyl pyrophosphate synthetase [Streptomyces venezuelae ATCC
10712]
Length = 253
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 128/231 (55%), Gaps = 7/231 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+I+DGN RWA A G GH+ G + E++ AE ++ +T++ S +N R
Sbjct: 25 PKHIGVILDGNRRWAKASGGTPEQGHKAGADKIQELLGWCAETDVEVVTLWMLSTDNLNR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P ++ L+ +I++ ++ +V +G L VLKEAE T NTG+
Sbjct: 85 PEEQLVPLLGIIENAVRA---LAADGRWRVNHVGTMDLLPSRTQSVLKEAEQATHDNTGI 141
Query: 131 NLFIAFNYSSRDEISRAIKNIF-QDIESGSV---CSHDVDSSLIAKYLDTSDVPDPDLII 186
+ +A Y R EI+ A++++ + E G+ + VD I+++L T PDPDL+I
Sbjct: 142 LVNVAVGYGGRQEIADAVRSLLLEHAERGTSFEELAEIVDVEHISEHLYTRGQPDPDLVI 201
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE+RLS F+LWQ A+SE+ F +WP F + F AL Y R RR+G
Sbjct: 202 RTSGEQRLSGFMLWQSAHSEYYFCEVHWPAFRKVDFLRALRDYAARHRRYG 252
>gi|91088189|ref|XP_972722.1| PREDICTED: similar to dehydrodolichyl diphosphate synthase
[Tribolium castaneum]
gi|270012136|gb|EFA08584.1| hypothetical protein TcasGA2_TC006239 [Tribolium castaneum]
Length = 285
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/235 (36%), Positives = 130/235 (55%), Gaps = 6/235 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IMDGN R+A + + GH KG + E + E+G+K +T++AFSI N++R
Sbjct: 26 PRHIAFIMDGNRRYATKTKVEKAEGHIKGFDKLAETLQWCLELGVKEVTVYAFSIENFKR 85
Query: 71 PVSEISELVKLIKSFLKKGFYSLKK---NNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
E+ L+KL ++ +K + +R+IGN L ++ ++ EAE T+ N
Sbjct: 86 SREEVDTLMKLATEKFRQLLDEKEKIMSEGVCIRIIGNLGLLSPELRKLVAEAELMTKDN 145
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L +AF+Y+SRDEI +++I + ++ ++ D+D LI+ L TS PDPDLI+R
Sbjct: 146 NKAFLNVAFSYTSRDEIFNTVQSIVKGVQDEALDVEDIDEDLISGALYTSCSPDPDLIVR 205
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
T GE R SDFLLWQ++ S F WP+F +H L R + L +K
Sbjct: 206 TSGEVRFSDFLLWQISNSFISFTKVLWPEFC---IWHLLACIFYYQRSYNDLQQK 257
>gi|15807434|ref|NP_296167.1| undecaprenyl pyrophosphate synthase [Deinococcus radiodurans R1]
gi|6460263|gb|AAF11988.1|AE002074_6 undecaprenyl diphosphate synthase [Deinococcus radiodurans R1]
Length = 339
Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 127/233 (54%), Gaps = 6/233 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+G+I+DGN R+A A GL R GH G + +E++ E+GI + TI+ S +N R
Sbjct: 106 PRHLGLILDGNRRFARAAGLQREMGHSFGADKAHEVLQWCLELGIPSATIWVLSTDNGSR 165
Query: 71 PVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+E++ ++ L++ ++ + N ++VR IG + +L L E+ T
Sbjct: 166 EPAELAHILSLLEREARQLAVDPRIHANRVRVRAIGQHDNFPPQVLAALNNLEESTAGYE 225
Query: 129 GLNLFIAFNYSSRDEISRAIKNIF--QDIESGSV--CSHDVDSSLIAKYLDTSDVPDPDL 184
G+ L IA Y R+EI A+++ Q + ++ + ++ I +L +D PDPD
Sbjct: 226 GMRLNIAVGYGGREEIVDAVQSYLRTQAAQGATLEQAAENLTPDAIGAHLYAADQPDPDF 285
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IIRT GE RLS F+LWQ YSE+ F YWP F R F AL + RDRRFG
Sbjct: 286 IIRTSGEIRLSGFMLWQSVYSEYYFCDVYWPGFRRVDFLRALRDFQGRDRRFG 338
>gi|10434964|dbj|BAB14439.1| unnamed protein product [Homo sapiens]
Length = 334
Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 134/234 (57%), Gaps = 4/234 (1%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A+++ + P P HI IMDGN R+A + R GH +G E + +GI +T+
Sbjct: 16 CANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R SE+ L+ L + S L + L+K+ + +RV+G+ L D+ ++
Sbjct: 76 YAFSIENFKRSKSEVDGLMDLARQKFSRLMEEKEKLQKHGVCIRVLGDLHLLPLDLQELI 135
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+A T+ L++ F Y+SR EIS A++ + +E G + D+ SL+ K L T+
Sbjct: 136 AQAVQATKNYNKCFLYVCFAYTSRHEISNAVREMAWGVEQGLLDPSDISESLLDKCLYTN 195
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
P PD++IRT GE RLSDFLLWQ ++S VF P WP+++ F A+ Q+ +
Sbjct: 196 RSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQM 249
>gi|148236869|ref|NP_001082651.1| dehydrodolichyl diphosphate synthase [Xenopus laevis]
gi|47937543|gb|AAH72115.1| LOC398626 protein [Xenopus laevis]
gi|76779715|gb|AAI06302.1| LOC398626 protein [Xenopus laevis]
Length = 332
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 82/222 (36%), Positives = 131/222 (59%), Gaps = 4/222 (1%)
Query: 1 MVASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ A+++ + P P H+ IMDGN R+A + R GH +G E E + +GI +T
Sbjct: 15 LCANVLKAGPIPKHVAFIMDGNRRYAQKCHVERQEGHSQGFEKLAETLRWCLNLGICEVT 74
Query: 60 IFAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCV 116
++AFSI N++R E+ L++L + + L + L+K+ + +RV+G+ L DI +
Sbjct: 75 VYAFSIENFKRSAEEVEGLMELARQKFTRLLEEREKLEKHGVCIRVLGDLTLLPLDIQKL 134
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT 176
+ +A +T+ + L + F+Y+SR EIS AI+ ++ G + DV SL+ + L T
Sbjct: 135 IAQAMLETKAYSKCFLNVCFSYTSRHEISNAIREAAWGVQEGLLDPRDVTESLLDQCLYT 194
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS 218
S P+PDL+IRT GE RLSDFLLWQ +YS VF WP+++
Sbjct: 195 SKSPEPDLLIRTSGEVRLSDFLLWQTSYSCLVFQSVLWPEYT 236
>gi|167756902|ref|ZP_02429029.1| hypothetical protein CLORAM_02451 [Clostridium ramosum DSM 1402]
gi|167703077|gb|EDS17656.1| hypothetical protein CLORAM_02451 [Clostridium ramosum DSM 1402]
Length = 193
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 116/189 (61%)
Query: 52 EVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDD 111
++G+K +T++AFS N+ RP E+ + KL K F + L +NN+K+ IG+
Sbjct: 5 KLGVKAMTVYAFSTENFARPEQEVQYIFKLPKDFFELYMKELIENNVKICTIGHLEMAPK 64
Query: 112 DILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIA 171
+ ++ A D+T+ NTGL L AF Y RDEI A K + +++G + ++++ ++
Sbjct: 65 ETQDIINSAIDKTKNNTGLKLCFAFIYGGRDEILEATKKLAMKVKAGELGVNEINETVFN 124
Query: 172 KYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
L T D+P+ DL+IRT GE+RLS+FLLWQ+AY+EF+F WPDF+ A+ Y
Sbjct: 125 DELMTKDLPEVDLMIRTSGEQRLSNFLLWQLAYAEFIFTDVLWPDFNENELDKAIWMYQN 184
Query: 232 RDRRFGGLS 240
RDRRFGGL
Sbjct: 185 RDRRFGGLK 193
>gi|147906875|ref|NP_001079475.1| hypothetical protein LOC379162 [Xenopus laevis]
gi|27882611|gb|AAH43759.1| MGC52912 protein [Xenopus laevis]
gi|115528273|gb|AAI24854.1| MGC52912 protein [Xenopus laevis]
Length = 332
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 129/222 (58%), Gaps = 4/222 (1%)
Query: 1 MVASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ A+++ + P P H+ IMDGN R+A + R GH +G E E + +GI +T
Sbjct: 15 LCANVLKAGPIPKHVAFIMDGNRRYAKKCHVERQEGHSQGFEKLAETLRWCLNLGICEVT 74
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCV 116
++AFSI N++R E+ L++L + + L+K+ +++RV+G+ L DI +
Sbjct: 75 VYAFSIENFKRSAEEVEGLLELARQKFTRLLEEKDKLEKHGVRIRVLGDLTLLPLDIQKL 134
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT 176
+ +A +TR + L + F Y+SR EI+ AI+ ++ G + DV SL+ + L T
Sbjct: 135 IAQAVLETRAYSKCFLNVCFAYTSRHEITNAIREAAWGVQEGLLDPRDVTESLLDQCLYT 194
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS 218
+ P+PDL+IRT GE RLSDFLLWQ +YS VF WP+++
Sbjct: 195 AKSPEPDLLIRTSGEVRLSDFLLWQTSYSCLVFQSVLWPEYT 236
>gi|258654533|ref|YP_003203689.1| undecaprenyl diphosphate synthase [Nakamurella multipartita DSM
44233]
gi|258557758|gb|ACV80700.1| undecaprenyl diphosphate synthase [Nakamurella multipartita DSM
44233]
Length = 255
Score = 152 bits (383), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 87/242 (35%), Positives = 128/242 (52%), Gaps = 7/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPR-CAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ ++ + P H+G+++DGN RWA G GHR G +++ E GI +T
Sbjct: 15 LTRELIGAPIPHHVGVMLDGNRRWARKAGFTNPTEGHRAGAAHIVDLLEWCQESGIGMVT 74
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++ S +N RRP E+ L+++I ++ + K+R++G L + + L
Sbjct: 75 LWLLSTDNLRRPGQELQPLLEIITDVVED--LAAPDRVWKLRIVGALDLLPEPMSARLTA 132
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQ-DIESGSVCSHDVDS---SLIAKYLD 175
A +T L + IA Y R EI A+K++ + I+ G +DS I ++L
Sbjct: 133 AATRTEHRRALQVNIAVGYGGRQEIVDAVKSMLEAGIKQGHGIQEVIDSLNVETIGEHLY 192
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
TS PDPDL+IRT GE+RLS FLLWQ A+SEF F YWPDF R F AL Y R RR
Sbjct: 193 TSGQPDPDLVIRTSGEQRLSGFLLWQSAHSEFWFCEAYWPDFRRVDFLRALRDYAARHRR 252
Query: 236 FG 237
+G
Sbjct: 253 YG 254
>gi|86740912|ref|YP_481312.1| undecaprenyl pyrophosphate synthetase [Frankia sp. CcI3]
gi|86567774|gb|ABD11583.1| Undecaprenyl pyrophosphate synthetase [Frankia sp. CcI3]
Length = 259
Score = 152 bits (383), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 134/242 (55%), Gaps = 8/242 (3%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+M+ P H+G++MDGN RWA G+ + GH+ G E ++++ VGIK++T+F
Sbjct: 19 QVMAGPLPAHVGLVMDGNRRWAREMGMANPSLGHKYGAEHAEDVLSWCELVGIKHVTVFV 78
Query: 63 FSINNWR-RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
S N + R +E++ L+++I+ + +V + G +L D VLKEA
Sbjct: 79 CSTENLQQRGDAEVAFLMQVIEQVVADRL-GRPDARWQVHLAGMLDTLPDSTARVLKEAV 137
Query: 122 DQTR-LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDT 176
+ TR + TG ++ +A Y R E+ A++ + + DV S+L IA++L T
Sbjct: 138 ETTRSVTTGAHVTLAVGYGGRQEVIEALRELLHERAEAGDSLTDVASTLTVDDIAQHLYT 197
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
+ PDPDL+IRT GE+RLS+FLLWQ AYSE F YWP F F AL + R+RR
Sbjct: 198 AGQPDPDLVIRTSGEQRLSNFLLWQSAYSELYFCEAYWPAFREIDFLRALRSFAARERRH 257
Query: 237 GG 238
G
Sbjct: 258 GA 259
>gi|42559893|sp|Q9RRP1|UPPS_DEIRA RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
Length = 274
Score = 152 bits (383), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 127/233 (54%), Gaps = 6/233 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+G+I+DGN R+A A GL R GH G + +E++ E+GI + TI+ S +N R
Sbjct: 41 PRHLGLILDGNRRFARAAGLQREMGHSFGADKAHEVLQWCLELGIPSATIWVLSTDNGSR 100
Query: 71 PVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+E++ ++ L++ ++ + N ++VR IG + +L L E+ T
Sbjct: 101 EPAELAHILSLLEREARQLAVDPRIHANRVRVRAIGQHDNFPPQVLAALNNLEESTAGYE 160
Query: 129 GLNLFIAFNYSSRDEISRAIKNIF--QDIESGSV--CSHDVDSSLIAKYLDTSDVPDPDL 184
G+ L IA Y R+EI A+++ Q + ++ + ++ I +L +D PDPD
Sbjct: 161 GMRLNIAVGYGGREEIVDAVQSYLRTQAAQGATLEQAAENLTPDAIGAHLYAADQPDPDF 220
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IIRT GE RLS F+LWQ YSE+ F YWP F R F AL + RDRRFG
Sbjct: 221 IIRTSGEIRLSGFMLWQSVYSEYYFCDVYWPGFRRVDFLRALRDFQGRDRRFG 273
>gi|255324387|ref|ZP_05365504.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
tuberculostearicum SK141]
gi|311740759|ref|ZP_07714586.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
pseudogenitalium ATCC 33035]
gi|255298293|gb|EET77593.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
tuberculostearicum SK141]
gi|311304279|gb|EFQ80355.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
pseudogenitalium ATCC 33035]
Length = 258
Score = 152 bits (383), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 132/242 (54%), Gaps = 8/242 (3%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLT 59
+A ++ P P HI I+ DGN RWA G + GHR+G + E+++ + I+ +T
Sbjct: 18 LARLIKGKPQPKHIAIMADGNRRWAREAGFTDISHGHRQGAKKIGEMISWCRDTDIEVVT 77
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
I+ S N +R E+ L +I + +S +VR++G+ L D+I +
Sbjct: 78 IYLLSTENLKRSEQEVELLFDIISDVVTHLSHS--DVGCQVRLVGHLDLLPDEIRQRMVT 135
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQ-DIESGSVCSHDVD---SSLIAKYLD 175
A +T NTG+ + +A Y R EI A++N+ + + E G+ + D + I ++L
Sbjct: 136 AAAETEDNTGVIVNVAVGYGGRQEIVDAVQNLVRAEAEKGTTAAEMADRVTAESIGEHLY 195
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
T +PDPDL+IRT GE+RLS FLLWQ AYSE F YWP F + F AL Y+ R RR
Sbjct: 196 TKGLPDPDLVIRTSGEQRLSGFLLWQAAYSEIWFTDTYWPAFRKVDFLRALRDYSQRSRR 255
Query: 236 FG 237
FG
Sbjct: 256 FG 257
>gi|71083607|ref|YP_266326.1| putative undecaprenyl diphosphate synthase [Candidatus Pelagibacter
ubique HTCC1062]
gi|71062720|gb|AAZ21723.1| Putative undecaprenyl diphosphate synthase [Candidatus Pelagibacter
ubique HTCC1062]
Length = 225
Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 132/231 (57%), Gaps = 7/231 (3%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+P H+ IIMDGNGRW R AGHR G+ + I+ IK LT++ FS NW
Sbjct: 2 NPIKHVAIIMDGNGRWGVKHKQSRNAGHRAGLNTVDLIINHCINHKIKFLTLYTFSSENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP +EI L KL+++FL+K + + +IK++ IG L + ++K +E +T
Sbjct: 62 KRPKNEIVFLFKLLENFLQKKISKIIEKDIKLKFIGELNKLPTKLQKLIKLSEKKTFNKK 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
L + IA NY S+ E+ +K I + + + ++D++L K+L P+PD++IRT
Sbjct: 122 TLQVNIALNYGSKIELINTVKKIKRKKITIN--EKNIDNNLYTKHL-----PNPDILIRT 174
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
G RLS+FLLWQ++Y+E F + WPDF + F +N++ R FG +
Sbjct: 175 GNTNRLSNFLLWQLSYTEIFFEKKLWPDFKGKDFDKIMNKFKNIKRNFGSI 225
>gi|297157597|gb|ADI07309.1| putative undecaprenyl diphosphate synthase [Streptomyces
bingchenggensis BCW-1]
Length = 253
Score = 151 bits (382), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 124/231 (53%), Gaps = 7/231 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+I+DGN RWA A G GH+ G E++ E ++ +T++ S +N R
Sbjct: 25 PKHIGVILDGNRRWARAAGGTTEQGHKAGASKIQELLGWCNETDVEVVTLWMLSTDNLDR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ +I+ ++ +V +GNR L VLKEAE T G+
Sbjct: 85 PEEELIPLLGIIEGAVRD---LAADGRWRVHHVGNRDLLPARTQTVLKEAERDTEHIDGI 141
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSDVPDPDLII 186
+ +A Y R EI+ A++++ D S + VD LI+++L T PDPDL+I
Sbjct: 142 LVNVAIGYGGRQEIADAVRSLLLDHASKGTSFEELAEVVDIDLISEHLYTRGQPDPDLVI 201
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE+RLS F+LWQ A+SE+ F +WP F + F AL Y R RR+G
Sbjct: 202 RTSGEQRLSGFMLWQSAHSEYYFCEVFWPAFRKVDFLRALRDYAARHRRYG 252
>gi|262201612|ref|YP_003272820.1| undecaprenyl diphosphate synthase [Gordonia bronchialis DSM 43247]
gi|262084959|gb|ACY20927.1| undecaprenyl diphosphate synthase [Gordonia bronchialis DSM 43247]
Length = 260
Score = 151 bits (382), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 86/242 (35%), Positives = 132/242 (54%), Gaps = 7/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLT 59
++ M + P H+ II DGN RWA G + GHR G + +++ A++GI +T
Sbjct: 20 LIQLMDMARIPRHVAIICDGNRRWAREAGFEDVSHGHRVGAQRIADMLGWCADLGIGAVT 79
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
I+ S N R E+ L++++ + + S +VR++G +L + L+
Sbjct: 80 IYLLSTENLSRESDELDALMEIVPDIVDE--ISAPDGQWRVRIVGTLDNLPGVVADRLRA 137
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD-IESGSVCSHDVDS---SLIAKYLD 175
A D+TR G+N+ +A Y R EI A++ + ++ + +G+ + +D+ I L
Sbjct: 138 ASDRTRGRDGMNVNVAVGYGGRQEIVDAVRALLEERLTAGATPAEMIDAVTVEAIDANLY 197
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
T PDPDL+IRT GE+RLS FLLWQ AYSE F YWP+F R F AL Y+ R+RR
Sbjct: 198 TKGQPDPDLVIRTSGEQRLSGFLLWQSAYSEIWFTDAYWPEFRRVDFLRALRDYSARNRR 257
Query: 236 FG 237
FG
Sbjct: 258 FG 259
>gi|111222976|ref|YP_713770.1| undecaprenyl pyrophosphate synthetase [Frankia alni ACN14a]
gi|111150508|emb|CAJ62207.1| Undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans-poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS) [Frankia alni
ACN14a]
Length = 258
Score = 151 bits (382), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 89/243 (36%), Positives = 139/243 (57%), Gaps = 10/243 (4%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+M+ P H+G++MDGN RWA GL + GHR G E ++++ VGI+++T+F
Sbjct: 18 QVMAGPLPAHVGLVMDGNRRWAREMGLANPSLGHRYGAEHAEDVLSWCEAVGIRHVTVFV 77
Query: 63 FSINNW-RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
S N RR +E++ L+++I+ + + +V + G +L D VLK+A
Sbjct: 78 CSTENLQRRGDAEVAFLMQVIEQVVSDRL-ARPDARWQVHLAGMLDALPDSTARVLKDAV 136
Query: 122 DQTR-LNTGLNLFIAFNYSSRDEISRAIK-NIFQDIESGSVCSHDVDSSL----IAKYLD 175
+ TR + TG ++ +A Y R E+ A++ ++++ E+G + D +SL IA++L
Sbjct: 137 ETTRTVTTGFHVTLAVGYGGRQEVIEALREHLYERAEAGDSLA-DAAASLRMDDIARHLY 195
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
T+ PDPDL+IRT GE+R+S+FLLWQ AYSE F YWP F F AL + R RR
Sbjct: 196 TAGQPDPDLVIRTSGEQRMSNFLLWQSAYSELYFCEAYWPAFREIDFLRALRSFAARGRR 255
Query: 236 FGG 238
G
Sbjct: 256 HGA 258
>gi|284033478|ref|YP_003383409.1| undecaprenyl diphosphate synthase [Kribbella flavida DSM 17836]
gi|283812771|gb|ADB34610.1| undecaprenyl diphosphate synthase [Kribbella flavida DSM 17836]
Length = 259
Score = 151 bits (382), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 87/241 (36%), Positives = 128/241 (53%), Gaps = 7/241 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ S+ P HIG+I+DGN RWA A G P GH G E + EVG+K +T+
Sbjct: 21 LARSLSPDRMPRHIGVIIDGNRRWARAAGDPVSRGHEAGASKIAEFLDWCDEVGVKVVTV 80
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N RP E+ L+++I+ +++ S+ ++ +G L VLK A
Sbjct: 81 WMLSTDNLTRPADELEPLLRIIEQTVEE-LASV--GGRRIHPVGALDLLPAATAEVLKSA 137
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVC----SHDVDSSLIAKYLDT 176
E T+ GL + +A Y R E++ A++++ + + + + VD IA++L T
Sbjct: 138 ETATQHVDGLLVNVAVGYGGRRELADAVRSLLLEEAAKGISIEELAERVDVEHIAEHLYT 197
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
PDPDL+IRT GE+RL FLLWQ A SEF F WPDF F A+ Y R+RRF
Sbjct: 198 KGQPDPDLVIRTSGEQRLGGFLLWQSALSEFYFCEALWPDFRHVDFLRAIRSYAQRERRF 257
Query: 237 G 237
G
Sbjct: 258 G 258
>gi|282865326|ref|ZP_06274378.1| undecaprenyl diphosphate synthase [Streptomyces sp. ACTE]
gi|282559799|gb|EFB65349.1| undecaprenyl diphosphate synthase [Streptomyces sp. ACTE]
Length = 256
Score = 151 bits (382), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 130/232 (56%), Gaps = 7/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+I+DGN RWA A G GH+ G + +E++ +E ++ +T++ S +N+ R
Sbjct: 28 PKHIGVILDGNRRWAKASGGSAVQGHQAGADKISELLGWCSETDVEVVTLWLLSTDNFDR 87
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L+++I++ +++ +V +G L VLKEAE T G+
Sbjct: 88 PEAELVPLLRIIENTVRQ---LAADGRWRVHHVGTLDLLPAQTQLVLKEAEAATSDVEGI 144
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSDVPDPDLII 186
+ +A Y R EI+ A++++ + S + V + LI+++L T PDPDL+I
Sbjct: 145 IVNVAVGYGGRQEIADAVRSLLLEHSSKGTTFEELAEVVSTDLISEHLYTRGQPDPDLVI 204
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
RT GE+RLS F+LWQ A+SE+ F +WP F + F AL Y R RR+G
Sbjct: 205 RTSGEQRLSGFMLWQSAHSEYYFCEVFWPAFRKVDFLRALRDYAARHRRYGA 256
>gi|297192366|ref|ZP_06909764.1| undecaprenyl pyrophosphate synthetase 1 [Streptomyces
pristinaespiralis ATCC 25486]
gi|197723032|gb|EDY66940.1| undecaprenyl pyrophosphate synthetase 1 [Streptomyces
pristinaespiralis ATCC 25486]
Length = 253
Score = 151 bits (381), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 129/232 (55%), Gaps = 7/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+I+DGN RWA A G GH+ G + +E++ AE ++ +T++ S +N+ R
Sbjct: 25 PKHIGVILDGNRRWAKASGGTAAQGHQAGADKISELLGWCAETDVEVVTLWLLSTDNFDR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ +I++ ++ +V +G L D VLKEAE T G+
Sbjct: 85 PEEELKPLLGIIENTVRN---LAADGRWRVHHVGTLDLLPDHTQRVLKEAEQATADVKGI 141
Query: 131 NLFIAFNYSSRDEISRAIKNIF-QDIESGSV---CSHDVDSSLIAKYLDTSDVPDPDLII 186
+ +A Y R EI+ A++++ + E G+ + VD I+++L T PDPDL+I
Sbjct: 142 LVNVAVGYGGRQEIADAVRSLLLEHAEKGTSFEELAEIVDVEHISEHLYTRGQPDPDLVI 201
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
RT GE+RLS F+LWQ A+SE+ F +WP F + F AL Y R RR+G
Sbjct: 202 RTSGEQRLSGFMLWQSAHSEYYFCEVFWPAFRKVDFLRALRDYAARHRRYGA 253
>gi|145591532|ref|YP_001153534.1| undecaprenyl diphosphate synthase [Pyrobaculum arsenaticum DSM
13514]
gi|145283300|gb|ABP50882.1| Undecaprenyl pyrophosphate synthetase [Pyrobaculum arsenaticum DSM
13514]
Length = 238
Score = 151 bits (381), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 133/236 (56%), Gaps = 9/236 (3%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVG-IKNLTIFAFSI 65
S P HI +I DGN R+A GL +++G+E + A E G IKN+T +A S
Sbjct: 6 SVKVPRHIAVIPDGNRRYAKKVGLDFYHAYKRGVEKVRSFLTWALEFGDIKNVTFYALST 65
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
N +R E+ L ++ + KK + +N +++R IG+R + ++ +++E E
Sbjct: 66 ENLQRSRVELEILFRIFEEEFKKTIEDPLIHENKVRIRFIGDRSIIPGRLVKLMEELESA 125
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP--D 181
T + +L A Y R EI R +K I SG V +++ + + LDT D+P +
Sbjct: 126 TSSYSERHLTFALGYGGRAEIVRCVKRII----SGEVKLAEINEESLFQCLDTRDLPNPE 181
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PD++IRTGGEKRLS+FLL+Q AYSE +F+ + WP+ RE + + +Y+ R RRFG
Sbjct: 182 PDVVIRTGGEKRLSNFLLYQTAYSELIFLDKLWPEIEREDLLYVVEEYSRRQRRFG 237
>gi|32450651|gb|AAH54312.1| LOC398626 protein [Xenopus laevis]
Length = 333
Score = 151 bits (381), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 82/221 (37%), Positives = 129/221 (58%), Gaps = 4/221 (1%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A ++ + P P H+ IMDGN R+A + R GH +G E E + +GI +T+
Sbjct: 17 AARILQAGPIPKHVAFIMDGNRRYAQKCHVERQEGHSQGFEKLAETLRWCLNLGICEVTV 76
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L++L + + L + L+K+ + +RV+G+ L DI ++
Sbjct: 77 YAFSIENFKRSAEEVEGLMELARQKFTRLLEEREKLEKHGVCIRVLGDLTLLPLDIQKLI 136
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+A +T+ + L + F+Y+SR EIS AI+ ++ G + DV SL+ + L TS
Sbjct: 137 AQAMLETKAYSKCFLNVCFSYTSRHEISNAIREAAWGVQEGLLDPRDVTESLLDQCLYTS 196
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS 218
P+PDL+IRT GE RLSDFLLWQ +YS VF WP+++
Sbjct: 197 KSPEPDLLIRTSGEVRLSDFLLWQTSYSCLVFQSVLWPEYT 237
>gi|15920367|ref|NP_376036.1| undecaprenyl pyrophosphate synthetase [Sulfolobus tokodaii str. 7]
gi|41018476|sp|Q976K2|UPPS_SULTO RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|15621149|dbj|BAB65145.1| 262aa long hypothetical undecaprenyl pyrophosphate synthetase
[Sulfolobus tokodaii str. 7]
Length = 262
Score = 151 bits (381), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 124/231 (53%), Gaps = 3/231 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW-R 69
P H+GII DGN RWA A L + G +++ E+GIKN+T+FA S N +
Sbjct: 32 PQHVGIIPDGNRRWARANNLSINDAYYSGYRKLKQVLLWLLEMGIKNITVFALSTENCDK 91
Query: 70 RPVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
R E++ + IK+ L++ Y + K +KVR IG L D+L VL + +T
Sbjct: 92 RSNLELNTIFNYIKAGLEELLYGEIIYKYEVKVRAIGLIYKLPLDLLEVLNQLSKKTENF 151
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L +A Y R EI A K I D E G + D++ ++ +YL ++ D DL+IR
Sbjct: 152 NKRKLTLAICYGGRQEIIDATKKIIADYEKGKIKLDDINENIFRQYLYDKELEDIDLVIR 211
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+ GE R+S+FLLW +AYSE F+ YWPDF + + A+ Y R R FG
Sbjct: 212 SSGEIRISNFLLWHIAYSELFFVDTYWPDFRKIDLWRAIRSYQKRKRNFGA 262
>gi|255718933|ref|XP_002555747.1| KLTH0G16390p [Lachancea thermotolerans]
gi|238937131|emb|CAR25310.1| KLTH0G16390p [Lachancea thermotolerans]
Length = 284
Score = 151 bits (381), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 128/221 (57%), Gaps = 6/221 (2%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S + P H+G+IMDGN RWA + + GH G + + E G+ T+FAFSI
Sbjct: 28 SDNVPQHVGLIMDGNRRWAKLKHVEIKEGHNAGFHSMSRALELCYEAGVSTATVFAFSIE 87
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
N++R +E+ L+ L +S +K+ + +K IK+ VIG+R L DD+L ++ AE
Sbjct: 88 NFKRSSAEVDSLMNLARSGIKQVVQNGEMAQKFGIKINVIGDRKLLPDDVLREVEAAETI 147
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N L I F Y+ RDE+ +IK + Q + G + S D++ + I ++L T P D
Sbjct: 148 TKDNKRAVLNICFPYTGRDELLHSIKEVVQATQLGDLASSDINEAAIDRHLYTGGSPPVD 207
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFV--FIPEYWPDF-SREL 221
L+IRT G RLSDFL+WQV+ + V F+ WPDF SR++
Sbjct: 208 LLIRTSGVTRLSDFLIWQVSRRDVVIEFLDCLWPDFGSRQM 248
>gi|320008821|gb|ADW03671.1| undecaprenyl diphosphate synthase [Streptomyces flavogriseus ATCC
33331]
Length = 253
Score = 151 bits (381), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 130/231 (56%), Gaps = 7/231 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+I+DGN RWA A G GH+ G + +E++ +E ++ +T++ S +N+ R
Sbjct: 25 PKHIGVILDGNRRWAKASGGSAVQGHQAGADKISELLGWCSETDVEVVTLWLLSTDNFDR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L+ +I++ +++ +V +G L VLKEAE+ T G+
Sbjct: 85 PEAELIPLLGIIENTVRQ---LASDGRWRVHHVGTLDLLPSRTQTVLKEAEEATAGVDGI 141
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSDVPDPDLII 186
+ +A Y R EI+ A++++ D + + V + LI+++L T PDPDL+I
Sbjct: 142 IVNVAVGYGGRQEIADAVRSLLLDHSARGTTFEELAEVVSTDLISEHLYTRGQPDPDLVI 201
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE+RLS F+LWQ A+SE+ F +WP F + F AL Y R RR+G
Sbjct: 202 RTSGEQRLSGFMLWQSAHSEYYFCEVFWPAFRKVDFLRALRDYAARHRRYG 252
>gi|226823339|ref|NP_001152808.1| dehydrodolichyl diphosphate synthase [Oncorhynchus mykiss]
gi|206994191|emb|CAR79336.1| dehydrodolichyl diphosphate synthase [Oncorhynchus mykiss]
Length = 335
Score = 151 bits (381), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 137/238 (57%), Gaps = 4/238 (1%)
Query: 1 MVASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ A+++ + P P H+ IMDGN R+A R + R GH +G + E + + I +T
Sbjct: 15 LSANILKAGPMPKHVAFIMDGNRRYARKRHVERQEGHTQGFDKLAETLRWCLNLSIHEVT 74
Query: 60 IFAFSINNWRRPVSEISELVKLIKS-FLK--KGFYSLKKNNIKVRVIGNRLSLDDDILCV 116
++AFSI N++R E+ L++L K F++ + +L+K+ + +RV+G+ L D+
Sbjct: 75 VYAFSIENFKRSKDEVDGLMELAKQKFIRLLQEQDNLEKHGVCIRVLGDLTLLPLDLQQH 134
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT 176
+ A TR + L + F Y+SR EI+ A++ + +E G + S DV +L+ L +
Sbjct: 135 IARAVVATRTHNKCFLNVCFAYTSRHEIANAVREMAWGVEQGLIKSSDVSEALLGHCLYS 194
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
S+ P+PDL+IRT GE RLSDFLLWQ ++S VF WP++S A+ QY L R
Sbjct: 195 SNSPNPDLLIRTSGEVRLSDFLLWQTSHSCLVFQSVLWPEYSFWNLCDAILQYQLNHR 252
>gi|301114423|ref|XP_002998981.1| undecaprenyl pyrophosphate synthetase, putative [Phytophthora
infestans T30-4]
gi|262111075|gb|EEY69127.1| undecaprenyl pyrophosphate synthetase, putative [Phytophthora
infestans T30-4]
Length = 257
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 132/232 (56%), Gaps = 5/232 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +I+DGN R+ + GH G + + G++ LT+FAFS NW+R
Sbjct: 25 PRHIAVIIDGNRRYGKNKYGSGTRGHSDGTKTVMNFTDWCIDAGVEALTVFAFSTENWKR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRV-IGNRLSLDDDILCVLKEAEDQTRLNT- 128
+EI L+KL+ F+ NI+VRV + + L ++ ++E E +T+
Sbjct: 85 EKAEIDALMKLVDGFIHDILGEALTRNIRVRVLVSDSRKLPAFLVKSIQEVEAKTQQCNV 144
Query: 129 -GLNLFI--AFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
LNL + A Y +RDEI A K I ++ G D+D +L+ + + T+ +PDPD++
Sbjct: 145 FHLNLCVRQAPVYGARDEIVGACKKIATEVAQGETSIDDIDENLLGQRMLTAGLPDPDIM 204
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+RT GE R+S+FLL+Q+AY+E +F+ ++WP+ +RE + ++N R RRFG
Sbjct: 205 LRTSGELRISNFLLFQIAYAELIFMDKFWPEVTREDLQDIIVEFNRRKRRFG 256
>gi|119871862|ref|YP_929869.1| undecaprenyl diphosphate synthase [Pyrobaculum islandicum DSM 4184]
gi|119673270|gb|ABL87526.1| Undecaprenyl pyrophosphate synthetase [Pyrobaculum islandicum DSM
4184]
Length = 238
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 132/232 (56%), Gaps = 9/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEV-GIKNLTIFAFSINNWR 69
P HI +I DGN R+A GL +++G+E + A E I+N+T +A S N +
Sbjct: 10 PSHIAVIPDGNRRFAKKAGLDFYHAYKRGVEKVRSFLLWALEFREIRNVTFYALSTENLQ 69
Query: 70 RPVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
R E+ L ++ + +K + +N +++R IG+R L ++ +++E E TR
Sbjct: 70 RSRLELEILFRIFEEEFRKSLEDPLIHENKVRIRFIGDRSLLPGRVVKLMEELESVTRSY 129
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP--DPDLI 185
+ NL A Y R EI R IK + +G V D++ + + LDT D+P +PD++
Sbjct: 130 SSYNLTFALGYGGRAEIVRCIKRLL----NGEVKIADINEETLFQCLDTRDLPNPEPDVV 185
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+RTGGEKRLS+FLL+Q AYSE +F+ + WP+ RE + + +Y+ R RRFG
Sbjct: 186 VRTGGEKRLSNFLLYQSAYSELIFLDKLWPEIEREDLVYIVEEYSRRQRRFG 237
>gi|224081661|ref|XP_002194939.1| PREDICTED: similar to Dehydrodolichyl diphosphate synthase
[Taeniopygia guttata]
Length = 333
Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/234 (36%), Positives = 135/234 (57%), Gaps = 4/234 (1%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A+++ + P P H+ IMDGN R+A + R GH +G + + + +GI+ +T+
Sbjct: 16 CANIIKAGPMPKHVAFIMDGNRRYAQKCHVERQQGHSQGFDKLAQTLRWCLNLGIREVTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+ L + S L + +LKK+ + +RV+G+ L DI ++
Sbjct: 76 YAFSIENFKRSKEEVDGLMDLARQKFSRLLEEQENLKKHGVCIRVLGDLPLLPVDIQELI 135
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+A TR L + F Y+SR EIS A++ + +E G + DV SL+ K L T+
Sbjct: 136 AQAVLATRNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLEPSDVSESLLDKCLYTN 195
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
+ PDPDL+IRT GE RLSDFLLWQ ++S VF WP++S A+ Q+ +
Sbjct: 196 NSPDPDLLIRTSGEVRLSDFLLWQTSHSCLVFQSVLWPEYSFWNLCEAILQFQM 249
>gi|315654510|ref|ZP_07907416.1| undecaprenyl diphosphate synthase [Mobiluncus curtisii ATCC 51333]
gi|315490974|gb|EFU80593.1| undecaprenyl diphosphate synthase [Mobiluncus curtisii ATCC 51333]
Length = 258
Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/235 (37%), Positives = 119/235 (50%), Gaps = 16/235 (6%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGII+DGN RWA A G P GH++G E++ E +K +T++ SI+N R
Sbjct: 31 PQHIGIILDGNRRWAKAEGAPATRGHQRGALKITEVLQWCEEWPVKVVTLWMLSIDNLGR 90
Query: 71 PVSEISELV----KLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
+E+ L + ++ G Y L RV+G+ LD D+ +L+ A D T
Sbjct: 91 KAAELQPLQDVIGRTVQGLQASGRYHL-------RVLGDTSLLDSDLAGILRAA-DGTGP 142
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDVPDP 182
L + IA Y R EI A++ + +V L I +L T PDP
Sbjct: 143 EQALVVNIAVAYGGRQEIVNAVREYLNEAAQKGETLAEVTDQLRLEDIEAHLYTKGQPDP 202
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRT GE+RLS FLLWQ A SEF F YWP F + F AL Y R+RR G
Sbjct: 203 DLVIRTSGEQRLSGFLLWQSANSEFYFCETYWPSFRKVDFLRALRDYGNRERRLG 257
>gi|184201411|ref|YP_001855618.1| short-chain Z-isoprenyl diphosphate synthase [Kocuria rhizophila
DC2201]
gi|183581641|dbj|BAG30112.1| short-chain Z-isoprenyl diphosphate synthase [Kocuria rhizophila
DC2201]
Length = 253
Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 125/233 (53%), Gaps = 9/233 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+G+++DGN RWA G GHR G E + E+ I+ +T++ S N R
Sbjct: 25 PHHVGVLVDGNRRWAKQFGATTEEGHRAGARKIVEFLRWCHELDIQVVTLYVLSTENLNR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNI-KVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
P E++ L+++I +++ L+ + +++ +G +L + + + + +T N G
Sbjct: 85 PAEELTALLEIITDLMRQ----LQDEGLCRIQAVGALATLPEALQEQVACSVRRTVSNPG 140
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDVPDPDLI 185
+L IA Y R EI A + + D ++ V SL I+++L T PDPDL+
Sbjct: 141 PHLNIAVGYGGRQEIVDAAREVLADADARGESLAQVARSLSVEDISEHLYTRGQPDPDLL 200
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
IRT GE+RLS FL+WQ AYSEF F WPDF R F AL Y R RRFGG
Sbjct: 201 IRTSGEQRLSGFLMWQSAYSEFYFCEALWPDFRRVDFLRALRDYARRHRRFGG 253
>gi|312380210|gb|EFR26273.1| hypothetical protein AND_07782 [Anopheles darlingi]
Length = 331
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 126/233 (54%), Gaps = 4/233 (1%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
V ++ + P P H+ IMDGN R+A + + GH G E +E + EVGI +T+
Sbjct: 36 VIRVLRAGPIPAHVAFIMDGNRRYAKKANIAKAEGHSAGFEKLSETLQWCLEVGISEVTV 95
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+ L + ++ L + I +R+IGN L DDI +
Sbjct: 96 YAFSIENFKRTQDEVDGLMDLAREKFQRLLAERDKLHERGICIRIIGNWDLLADDIQRSI 155
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
EA T+ N L +AF Y+SRDE++ +I+ + Q I G + DV+ L+ + L T
Sbjct: 156 AEAVLLTKHNRKATLNVAFAYTSRDEMTHSIRTVAQGISDGRLEPGDVNEELLTRCLYTK 215
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
+PDL++RT GE RLSDFLLWQ + F WP+F+ F A+ Y
Sbjct: 216 YSAEPDLLVRTSGEVRLSDFLLWQSTSTVMYFTETLWPEFTIWHLFGAVFYYQ 268
>gi|163782041|ref|ZP_02177040.1| hypothetical protein HG1285_17949 [Hydrogenivirga sp. 128-5-R1-1]
gi|159882573|gb|EDP76078.1| hypothetical protein HG1285_17949 [Hydrogenivirga sp. 128-5-R1-1]
Length = 207
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 120/208 (57%), Gaps = 6/208 (2%)
Query: 30 LPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKG 89
+PR GH +G EV EI A ++G++ LT+FAFS NW RP E+ L L++++L
Sbjct: 1 MPRIMGHYRGAEVAEEITKACIDIGVEYLTLFAFSTENWNRPKEEVELLFDLLRNYLTGK 60
Query: 90 FYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIK 149
L ++++ IG R + D+ +++E E T + + + +A +Y RD+I RA+
Sbjct: 61 KEELIDLGVRLKFIGRRDRIGKDLRLLMEELERDTSKDYRITVVLAVDYGGRDDILRAVN 120
Query: 150 NIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVF 209
+ + + +D + +LD D+PDPDL+IRT GE+R+S+FLLW +AY+E F
Sbjct: 121 KLIR------LEFDHIDEDTFSHFLDLGDIPDPDLLIRTAGERRISNFLLWNLAYTELYF 174
Query: 210 IPEYWPDFSRELFFHALNQYNLRDRRFG 237
WP+F+ E A+ ++ R R+FG
Sbjct: 175 TEVCWPEFTVEELQRAIEDFSNRKRKFG 202
>gi|326331047|ref|ZP_08197346.1| di-trans,poly-cis-decaprenylcistransferase [Nocardioidaceae
bacterium Broad-1]
gi|325951258|gb|EGD43299.1| di-trans,poly-cis-decaprenylcistransferase [Nocardioidaceae
bacterium Broad-1]
Length = 258
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 125/241 (51%), Gaps = 7/241 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M+ + S P H+G+++DGN RWA G GHR G ++ E+GI+ +T+
Sbjct: 20 MLRKLDVSKLPKHVGVMLDGNRRWAKEVGQSTAHGHRAGAANIEPLLTWCDEIGIEVVTL 79
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N RP E++ L+++I + + ++ +G L D + LK A
Sbjct: 80 WLLSTDNLNRPAEELAPLLEIIADAVDS---LADERRWRLHPVGALDLLPDWLAHRLKAA 136
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDT 176
E+ TR G+ + +A Y R EI+ A++ + + S + +D IA +L T
Sbjct: 137 EEATRDVDGMLVNVAVGYGGRREIADAVRALLNEHASRGTSLEELAQIIDVEHIADHLYT 196
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
PDPDL+IRT GE+RL FLLWQ A SEF F YWPDF R F AL Y R+RR
Sbjct: 197 KGQPDPDLVIRTSGEQRLGGFLLWQSAKSEFYFCEAYWPDFRRTDFLRALRAYAHRERRL 256
Query: 237 G 237
G
Sbjct: 257 G 257
>gi|304390374|ref|ZP_07372327.1| undecaprenyl diphosphate synthase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|304326130|gb|EFL93375.1| undecaprenyl diphosphate synthase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
Length = 258
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/235 (37%), Positives = 119/235 (50%), Gaps = 16/235 (6%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGII+DGN RWA A G P GH++G E++ E +K +T++ SI+N R
Sbjct: 31 PQHIGIILDGNRRWAKAEGAPTTRGHQRGALKITEVLQWCEEWPVKVVTLWMLSIDNLGR 90
Query: 71 PVSEISELV----KLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
+E+ L + ++ G Y L RV+G+ LD D+ +L+ A D T
Sbjct: 91 KAAELQPLQDVIGRTVQGLQASGRYHL-------RVLGDTSLLDSDLADILRAA-DGTGP 142
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDVPDP 182
L + IA Y R EI A++ + +V L I +L T PDP
Sbjct: 143 EQALVVNIAVAYGGRQEIVNAVREYLTEAAQKGETLAEVTDQLRLEDIEAHLYTKGQPDP 202
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRT GE+RLS FLLWQ A SEF F YWP F + F AL Y R+RR G
Sbjct: 203 DLVIRTSGEQRLSGFLLWQSANSEFYFCETYWPSFRKVDFLRALRDYGNRERRLG 257
>gi|68536553|ref|YP_251258.1| hypothetical protein jk1467 [Corynebacterium jeikeium K411]
gi|260577695|ref|ZP_05845630.1| undecaprenyl diphosphate synthase [Corynebacterium jeikeium ATCC
43734]
gi|68264152|emb|CAI37640.1| uppS1 [Corynebacterium jeikeium K411]
gi|258604090|gb|EEW17332.1| undecaprenyl diphosphate synthase [Corynebacterium jeikeium ATCC
43734]
Length = 256
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 126/242 (52%), Gaps = 7/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLT 59
+ S+ P H+ I+ DGN RWA G + GHR G E+ E+GI+ +T
Sbjct: 16 LARSLREKPRPKHVAIMADGNRRWARENGFTDVSHGHRVGARKIAEMCGWCDELGIETVT 75
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++ S N +R E+S L +I ++ + ++R +G+ L + + L+E
Sbjct: 76 VYLLSTENLKRSPEELSLLCSIIGDVAEE--LADSDAGFQLRTVGHLELLPEQLRTRLEE 133
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAK----YLD 175
+ +T +TG+ + +A Y R EI A++ + ++ D+ ++ A+ ++
Sbjct: 134 NQAKTNDHTGVRVNVAVGYGGRQEIVDAVQTLVAELAEQGTAPEDMAEAITAEALGNHMY 193
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
TS PDPDL+IRT GE+RLS FLLWQ AYSE F YWP F R F AL Y+ R RR
Sbjct: 194 TSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEIWFTDTYWPAFRRVDFLRALRDYSQRHRR 253
Query: 236 FG 237
FG
Sbjct: 254 FG 255
>gi|315606057|ref|ZP_07881088.1| undecaprenyl diphosphate synthase [Actinomyces sp. oral taxon 180
str. F0310]
gi|315312339|gb|EFU60425.1| undecaprenyl diphosphate synthase [Actinomyces sp. oral taxon 180
str. F0310]
Length = 253
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 130/239 (54%), Gaps = 7/239 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + ++ P HIG+I+DGN RWA + G GHR G +E + A + G+ +T++
Sbjct: 17 AELSEANVPAHIGVILDGNRRWAKSLGATASQGHRAGAGKISEFLQWADDAGVSIVTLWL 76
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
S +N R +E+ EL+++I + + K+ ++G+ L + + L+ +
Sbjct: 77 LSTDNLSRDAAELGELLRIICEAVS---LLADQERWKLALVGDLSLLPERVAEDLRASVA 133
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIES-GSVCSHDVDS---SLIAKYLDTSD 178
+T G+ + IA Y R EI+ A++++ ++ + G DS + I +L T D
Sbjct: 134 RTEGTVGMTVNIAVGYGGRHEITEAVRSMMREAAAEGRTLEELADSFTDADITAHLYTKD 193
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDPDL+IRT GE+RLS F+LWQ +SE+ F YWPDF R F AL Y R+RR G
Sbjct: 194 QPDPDLVIRTSGEQRLSGFMLWQSVHSEYYFCEVYWPDFRRVDFLRALRSYAQRERRMG 252
>gi|38233525|ref|NP_939292.1| putative undecaprenyl pyrophosphate synthetase [Corynebacterium
diphtheriae NCTC 13129]
gi|42559925|sp|P60480|UPPS1_CORDI RecName: Full=Undecaprenyl pyrophosphate synthase 1; Short=UPP
synthase 1; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase 1;
AltName: Full=Undecaprenyl diphosphate synthase 1;
Short=UDS 1
gi|38199785|emb|CAE49448.1| Putative undecaprenyl pyrophosphate synthetase [Corynebacterium
diphtheriae]
Length = 265
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/234 (37%), Positives = 126/234 (53%), Gaps = 11/234 (4%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P+H+ I+ DGN RWA G GHR G + E+V A ++ +T++ S N
Sbjct: 35 PEHVAIMCDGNRRWAREAGFADVTHGHRVGAKKIGEMVRWCAHTDVELVTVYLLSTENLG 94
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ L +I + + + + N ++R++G+ L DD+ L +A+D T NTG
Sbjct: 95 RASDELQMLFDIIGDVVDE--LASPETNCRLRLVGHLDLLPDDVSRRLTQAQDSTNDNTG 152
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSH------DVDSSLIAKYLDTSDVPDPD 183
+ + +A Y R EI A++ + + + VDS I+K+L TS PDPD
Sbjct: 153 VFVNVAVGYGGRQEIVDAVRELIDAEAAAGTTATEMAEKISVDS--ISKHLYTSGQPDPD 210
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
L+IRT GE+RLS FLLWQ AYSE F YWP F R F AL +Y+ R RRFG
Sbjct: 211 LVIRTSGEQRLSGFLLWQAAYSEIWFTDTYWPAFRRVDFLRALREYSKRSRRFG 264
>gi|91761972|ref|ZP_01263937.1| Putative undecaprenyl diphosphate synthase [Candidatus Pelagibacter
ubique HTCC1002]
gi|91717774|gb|EAS84424.1| Putative undecaprenyl diphosphate synthase [Candidatus Pelagibacter
ubique HTCC1002]
Length = 225
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 131/231 (56%), Gaps = 7/231 (3%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+P H+ IIMDGNGRW R AGHR G+ + I+ IK LT++ FS NW
Sbjct: 2 NPIKHVAIIMDGNGRWGVKHKQSRNAGHRAGLNTVDLIINHCINHKIKFLTLYTFSSENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP +EI L KL+++FL+K + + +IK++ IG L + ++K +E +T
Sbjct: 62 KRPKNEIFFLFKLLENFLQKKISKIIEKDIKLKFIGELNKLPTKLQKLIKLSEKKTFNKK 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
L + IA NY S+ E+ IK + ++ ++D++L K+L P+PD++IRT
Sbjct: 122 TLQVNIALNYGSKIELINTIKK--IKQKKITINEKNIDNNLYTKHL-----PNPDILIRT 174
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
G RLS+FLLWQ++Y+E F + WPDF + F +N++ R FG +
Sbjct: 175 GNTHRLSNFLLWQLSYTEIFFEKKLWPDFKGKDFDKIMNKFKNIKRNFGSI 225
>gi|298345923|ref|YP_003718610.1| undecaprenyl pyrophosphate synthetase [Mobiluncus curtisii ATCC
43063]
gi|315657581|ref|ZP_07910463.1| undecaprenyl diphosphate synthase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|298235984|gb|ADI67116.1| undecaprenyl pyrophosphate synthetase [Mobiluncus curtisii ATCC
43063]
gi|315492053|gb|EFU81662.1| undecaprenyl diphosphate synthase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 258
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/235 (37%), Positives = 119/235 (50%), Gaps = 16/235 (6%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGII+DGN RWA A G P GH++G E++ E +K +T++ SI+N R
Sbjct: 31 PQHIGIILDGNRRWAKAEGAPATRGHQRGALKITEVLQWCEEWPVKVVTLWMLSIDNLGR 90
Query: 71 PVSEISELV----KLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
+E+ L + ++ G Y L RV+G+ LD D+ +L+ A D T
Sbjct: 91 KAAELQPLQDVIGRTVQGLQASGRYHL-------RVLGDTSLLDSDLADILRAA-DGTGP 142
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDVPDP 182
L + IA Y R EI A++ + +V L I +L T PDP
Sbjct: 143 EQALVVNIAVAYGGRQEIVNAVREYLTEAAQKGETLAEVTDQLRLEDIEAHLYTKGQPDP 202
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRT GE+RLS FLLWQ A SEF F YWP F + F AL Y R+RR G
Sbjct: 203 DLVIRTSGEQRLSGFLLWQSANSEFYFCETYWPSFRKVDFLRALRDYGNRERRLG 257
>gi|158301316|ref|XP_321028.4| AGAP002026-PA [Anopheles gambiae str. PEST]
gi|157012412|gb|EAA01246.5| AGAP002026-PA [Anopheles gambiae str. PEST]
Length = 312
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/221 (37%), Positives = 122/221 (55%), Gaps = 4/221 (1%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
V ++ + P P H+ IMDGN R+A + + GH G E +E + EVGI +T+
Sbjct: 23 VIRVLQAGPIPRHVAFIMDGNRRYARKANIAKAEGHSAGFEKLSETLQWCLEVGITEVTV 82
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+ L + ++ L + I +R+IGN L+ DI +
Sbjct: 83 YAFSIENFKRTQEEVDTLMNLARDKFQRLLAERDKLHERGICIRIIGNWDLLEPDIRRSI 142
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
EA TR N L +AF Y+SRDEI+ +I+ + Q + G + DV L+ + L T
Sbjct: 143 AEAVLLTRHNRKAILNVAFAYTSRDEITHSIRTVAQAVGDGQLEPDDVSEELLTRCLYTK 202
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS 218
+PDL++RT GE RLSDFLLWQ A + F WP+F+
Sbjct: 203 YSAEPDLLVRTSGEVRLSDFLLWQSATTVMYFTETLWPEFT 243
>gi|296207139|ref|XP_002750512.1| PREDICTED: dehydrodolichyl diphosphate synthase isoform 1
[Callithrix jacchus]
Length = 334
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 133/234 (56%), Gaps = 4/234 (1%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A+++ + P P HI IMDGN R+A + R GH +G E + +GI +T+
Sbjct: 16 CANIIKAGPVPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R SE+ L+ L + S L + L+K+ + +RV+G+ L D+ ++
Sbjct: 76 YAFSIENFKRSKSEVDGLMDLARQKFSRLMEEQEKLQKHGVCIRVLGDLHLLPLDLQELI 135
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+A T+ L + F Y+SR EIS A++ + +E G + D+ SL+ K L T+
Sbjct: 136 AQAVQATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDISESLLDKCLYTN 195
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
P PD++IRT GE RLSDFLLWQ ++S VF P WP+++ F A+ Q+ +
Sbjct: 196 RSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQM 249
>gi|114554903|ref|XP_001143625.1| PREDICTED: dehydrodolichyl diphosphate synthase isoform 4 [Pan
troglodytes]
gi|114554905|ref|XP_001143689.1| PREDICTED: dehydrodolichyl diphosphate synthase isoform 5 [Pan
troglodytes]
gi|114554907|ref|XP_001143769.1| PREDICTED: dehydrodolichyl diphosphate synthase isoform 6 [Pan
troglodytes]
gi|114554909|ref|XP_001143856.1| PREDICTED: dehydrodolichyl diphosphate synthase isoform 7 [Pan
troglodytes]
gi|114554911|ref|XP_001143927.1| PREDICTED: dehydrodolichyl diphosphate synthase isoform 8 [Pan
troglodytes]
Length = 333
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 133/234 (56%), Gaps = 4/234 (1%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A+++ + P P HI IMDGN R+A + R GH +G E + +GI +T+
Sbjct: 16 CANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R SE+ L+ L + S L + L+K+ + +RV+G+ L D+ ++
Sbjct: 76 YAFSIENFKRSKSEVDGLMDLARQKFSRLMEEQEKLQKHGVCIRVLGDLHLLPLDLQELI 135
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+A T+ L + F Y+SR EIS A++ + +E G + D+ SL+ K L T+
Sbjct: 136 AQAVQATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDISESLLDKCLYTN 195
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
P PD++IRT GE RLSDFLLWQ ++S VF P WP+++ F A+ Q+ +
Sbjct: 196 RSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQM 249
>gi|213965509|ref|ZP_03393704.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
amycolatum SK46]
gi|213951893|gb|EEB63280.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
amycolatum SK46]
Length = 261
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/242 (35%), Positives = 131/242 (54%), Gaps = 8/242 (3%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLT 59
+A + P P H+ I+ DGN RWA G + GHR G E V AE I+ +T
Sbjct: 21 LAQELEGKPRPKHVAIMADGNRRWAREAGFTDVSHGHRVGSRKIAEFVGWCAEQEIELVT 80
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
I+ S N R E+ L +I + + + N++++R++G+ L + + L+
Sbjct: 81 IYLLSTENLGRDPEELELLFDIIADVVDE--LAQSPNDVRLRMVGHLELLPERMTTRLRH 138
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLD 175
E+ T NTG+ + IA Y R EI A++ I ++ + + + +++ + I++ L
Sbjct: 139 DEEVTANNTGIQVNIAVGYGGRQEIVDAVRKIIRESVAEGIDASELEERITTDAISRRLY 198
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
TS PDPDL+IRT GE+RLS FLLWQ AYSE F YWP+F R F AL ++ R RR
Sbjct: 199 TSGQPDPDLVIRTSGEQRLSGFLLWQTAYSEIWFTDTYWPEFRRIDFLRALRDFSQRSRR 258
Query: 236 FG 237
FG
Sbjct: 259 FG 260
>gi|114554899|ref|XP_513233.2| PREDICTED: dehydrodolichyl diphosphate synthase isoform 13 [Pan
troglodytes]
gi|114554901|ref|XP_001144304.1| PREDICTED: dehydrodolichyl diphosphate synthase isoform 12 [Pan
troglodytes]
Length = 334
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 133/234 (56%), Gaps = 4/234 (1%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A+++ + P P HI IMDGN R+A + R GH +G E + +GI +T+
Sbjct: 16 CANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R SE+ L+ L + S L + L+K+ + +RV+G+ L D+ ++
Sbjct: 76 YAFSIENFKRSKSEVDGLMDLARQKFSRLMEEQEKLQKHGVCIRVLGDLHLLPLDLQELI 135
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+A T+ L + F Y+SR EIS A++ + +E G + D+ SL+ K L T+
Sbjct: 136 AQAVQATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDISESLLDKCLYTN 195
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
P PD++IRT GE RLSDFLLWQ ++S VF P WP+++ F A+ Q+ +
Sbjct: 196 RSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQM 249
>gi|21234207|ref|NP_639818.1| putative bifunctional undecaprenyl pyrophosphate
synthetase/phytoene synthase [Streptomyces coelicolor
A3(2)]
gi|42558905|sp|Q9ACU1|CRUP_STRCO RecName: Full=Bifunctional protein CrtB/UppS; Includes: RecName:
Full=Phytoene synthase; Includes: RecName:
Full=Undecaprenyl pyrophosphate synthase 3; Short=UPP
synthase 3; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase 3;
AltName: Full=Undecaprenyl diphosphate synthase 3;
Short=UDS 3
gi|13620694|emb|CAC36733.1| putative bifunctional undecaprenyl pyrophosphate
synthetase/phytoene synthase [Streptomyces coelicolor
A3(2)]
Length = 564
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 128/228 (56%), Gaps = 1/228 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +I DGN RWA ARGL GHR GI +V AA GI+++T++ FS NW R
Sbjct: 321 PGHIAVIADGNRRWAEARGLLADQGHRAGIRAVLRLVNAAQRTGIRHVTVYMFSTENWYR 380
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E++ L + +G ++ + ++VR G R L++ + + E T N L
Sbjct: 381 SQGEVAALFGAFADWFARGAQTVHELGVRVRWSGRRDRLEESLASSFELLESMTANNDKL 440
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L I +Y R+E++ A + + + +G++ + + +A++L ++PD DL++RT
Sbjct: 441 TLTICLDYGGREELAAAARALAAEAVAGTIRPEQIGMAEVARHLYVPEMPDVDLLVRT-C 499
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R+S+FL W +AY+E VF P WPDF A++ Y R+RRFGG
Sbjct: 500 EQRISNFLPWHLAYAELVFDPAPWPDFDLARLRDAVDSYAGRERRFGG 547
>gi|108999720|ref|XP_001109252.1| PREDICTED: dehydrodolichyl diphosphate synthase-like isoform 2
[Macaca mulatta]
gi|108999723|ref|XP_001109408.1| PREDICTED: dehydrodolichyl diphosphate synthase-like isoform 3
[Macaca mulatta]
gi|332245104|ref|XP_003271703.1| PREDICTED: dehydrodolichyl diphosphate synthase [Nomascus
leucogenys]
Length = 334
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 133/234 (56%), Gaps = 4/234 (1%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A+++ + P P HI IMDGN R+A + R GH +G E + +GI +T+
Sbjct: 16 CANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R SE+ L+ L + S L + L+K+ + +RV+G+ L D+ ++
Sbjct: 76 YAFSIENFKRSKSEVDGLMDLARQKFSRLMEEQEKLQKHGVCIRVLGDLHLLPLDLQELI 135
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+A T+ L + F Y+SR EIS A++ + +E G + D+ SL+ K L T+
Sbjct: 136 AQAVQATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDISESLLDKCLYTN 195
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
P PD++IRT GE RLSDFLLWQ ++S VF P WP+++ F A+ Q+ +
Sbjct: 196 RSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQM 249
>gi|45580742|ref|NP_079163.2| dehydrodolichyl diphosphate synthase isoform a [Homo sapiens]
gi|56206243|emb|CAI21495.1| dehydrodolichyl diphosphate synthase [Homo sapiens]
gi|119628211|gb|EAX07806.1| dehydrodolichyl diphosphate synthase, isoform CRA_a [Homo sapiens]
gi|119628216|gb|EAX07811.1| dehydrodolichyl diphosphate synthase, isoform CRA_a [Homo sapiens]
Length = 334
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 133/234 (56%), Gaps = 4/234 (1%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A+++ + P P HI IMDGN R+A + R GH +G E + +GI +T+
Sbjct: 16 CANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R SE+ L+ L + S L + L+K+ + +RV+G+ L D+ ++
Sbjct: 76 YAFSIENFKRSKSEVDGLMDLARQKFSRLMEEKEKLQKHGVCIRVLGDLHLLPLDLQELI 135
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+A T+ L + F Y+SR EIS A++ + +E G + D+ SL+ K L T+
Sbjct: 136 AQAVQATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDISESLLDKCLYTN 195
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
P PD++IRT GE RLSDFLLWQ ++S VF P WP+++ F A+ Q+ +
Sbjct: 196 RSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQM 249
>gi|291399523|ref|XP_002716147.1| PREDICTED: dehydrodolichyl diphosphate synthase [Oryctolagus
cuniculus]
Length = 334
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/234 (36%), Positives = 132/234 (56%), Gaps = 4/234 (1%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A+++ + P P HI IMDGN R+A + R GH +G E + +GI +T+
Sbjct: 16 CANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R SE+ L+ L + S L + L+K+ + +RV+G+ L D+ ++
Sbjct: 76 YAFSIENFKRSKSEVDGLMDLARQKFSRLMEEQEKLQKHGVCIRVLGDLHLLPLDLQELI 135
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+A T+ L + F Y+SR EIS A+K + +E G + DV SL+ K L TS
Sbjct: 136 AQAVRATKNYNKCFLNVCFAYTSRHEISNAVKEMAWGVEQGLLDPSDVSESLLDKCLYTS 195
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
P PD++IRT GE RLSDFLLWQ ++S VF P WP+++ A+ Q+ +
Sbjct: 196 HSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLCEAILQFQM 249
>gi|227504089|ref|ZP_03934138.1| undecaprenyl pyrophosphate synthetase [Corynebacterium striatum
ATCC 6940]
gi|227199323|gb|EEI79371.1| undecaprenyl pyrophosphate synthetase [Corynebacterium striatum
ATCC 6940]
Length = 256
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 125/232 (53%), Gaps = 7/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ I+ DGN RWA G + GHR+G + +E+++ + I+ +TI+ S N +
Sbjct: 26 PRHVAIMADGNRRWAREAGFTDISHGHRQGAKKISEMISWCKDTDIEVVTIYLLSTENLK 85
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ L +I +K S + ++R++G+ L ++ ++ A T N G
Sbjct: 86 RSTQEVQLLFDIISDVVK--HLSEGDLDCQIRLVGHLDLLPAEVTEKMRAAAQATEDNKG 143
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDVPDPDLI 185
+ + IA Y R EI A++N+ +D + ++ S+ I +L T +PDPDL+
Sbjct: 144 VIVNIAVGYGGRQEIVDAVQNLIRDEAQKGHSTEEIADSVTADAITSHLYTKGLPDPDLV 203
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRT GE+RLS FLLWQ AYSE F YWP F R F AL Y+ R RRFG
Sbjct: 204 IRTSGEQRLSGFLLWQAAYSEIWFTDTYWPAFRRVDFLRALRDYSQRSRRFG 255
>gi|13177736|gb|AAH03643.1| Dehydrodolichyl diphosphate synthase [Homo sapiens]
gi|317040154|gb|ADU87642.1| epididymis secretory sperm binding protein Li 189m [Homo sapiens]
gi|325464253|gb|ADZ15897.1| dehydrodolichyl diphosphate synthase [synthetic construct]
Length = 333
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 133/234 (56%), Gaps = 4/234 (1%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A+++ + P P HI IMDGN R+A + R GH +G E + +GI +T+
Sbjct: 16 CANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R SE+ L+ L + S L + L+K+ + +RV+G+ L D+ ++
Sbjct: 76 YAFSIENFKRSKSEVDGLMDLARQKFSRLMEEKEKLQKHGVCIRVLGDLHLLPLDLQELI 135
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+A T+ L + F Y+SR EIS A++ + +E G + D+ SL+ K L T+
Sbjct: 136 AQAVQATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDISESLLDKCLYTN 195
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
P PD++IRT GE RLSDFLLWQ ++S VF P WP+++ F A+ Q+ +
Sbjct: 196 RSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQM 249
>gi|45580738|ref|NP_995583.1| dehydrodolichyl diphosphate synthase isoform b [Homo sapiens]
gi|116241329|sp|Q86SQ9|DHDDS_HUMAN RecName: Full=Dehydrodolichyl diphosphate synthase; Short=Dedol-PP
synthase
gi|28557344|dbj|BAC57588.1| dehydrodolichyl diphosphate synthase [Homo sapiens]
gi|119628215|gb|EAX07810.1| dehydrodolichyl diphosphate synthase, isoform CRA_d [Homo sapiens]
gi|119628217|gb|EAX07812.1| dehydrodolichyl diphosphate synthase, isoform CRA_d [Homo sapiens]
Length = 333
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 133/234 (56%), Gaps = 4/234 (1%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A+++ + P P HI IMDGN R+A + R GH +G E + +GI +T+
Sbjct: 16 CANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R SE+ L+ L + S L + L+K+ + +RV+G+ L D+ ++
Sbjct: 76 YAFSIENFKRSKSEVDGLMDLARQKFSRLMEEKEKLQKHGVCIRVLGDLHLLPLDLQELI 135
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+A T+ L + F Y+SR EIS A++ + +E G + D+ SL+ K L T+
Sbjct: 136 AQAVQATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDISESLLDKCLYTN 195
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
P PD++IRT GE RLSDFLLWQ ++S VF P WP+++ F A+ Q+ +
Sbjct: 196 RSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQM 249
>gi|319950189|ref|ZP_08024116.1| putative undecaprenyl pyrophosphate synthetase [Dietzia cinnamea
P4]
gi|319436093|gb|EFV91286.1| putative undecaprenyl pyrophosphate synthetase [Dietzia cinnamea
P4]
Length = 295
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/240 (36%), Positives = 128/240 (53%), Gaps = 7/240 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+S+ P H+ ++ DGN RWA G A GHR G E++ E+GI TI+
Sbjct: 57 SSLEGKRLPRHVAVMCDGNRRWAKEAGFTDVAHGHRAGAVKIAEMLGWCDELGIDVATIY 116
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
S N R E+ EL+++I + + + + N +VR++G L + + L+ AE
Sbjct: 117 LLSTENLGRDADELGELLQIIADVVDE--ITRPERNWEVRIVGRLELLPEWLADRLRHAE 174
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD-IESGSVCSHDVDS---SLIAKYLDTS 177
+ G+ + +A Y R EI+ A + + + I+ G + VD I ++L TS
Sbjct: 175 QVSTGRPGVKVNVAVGYGGRQEIADAARELVEQLIDEGRTGADLVDGITVEGIGEHLYTS 234
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDPDL+IRT GE+RLS FLLWQ AYSE F YWP F R F AL +Y+ R+RRFG
Sbjct: 235 GQPDPDLVIRTSGEQRLSGFLLWQSAYSEIWFTEAYWPAFRRVDFLRALREYSARNRRFG 294
>gi|303244703|ref|ZP_07331034.1| undecaprenyl diphosphate synthase [Methanothermococcus okinawensis
IH1]
gi|302484917|gb|EFL47850.1| undecaprenyl diphosphate synthase [Methanothermococcus okinawensis
IH1]
Length = 263
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 130/231 (56%), Gaps = 4/231 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+IMDGN R A G GH G + E + ++ IK +T+++FS+ N+ R
Sbjct: 32 PKHIGVIMDGNRRMARIMGEKSTKGHYIGAKKVREFIGWCVDLNIKIITLYSFSLENFNR 91
Query: 71 PVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
P E+ L+KL + + ++ K I ++ IG L +++ + AE++T+
Sbjct: 92 PKEEVDALMKLFEREFRAVAEDRNVHKYKIHIKAIGRIELLPENVREAIAYAENKTKDYD 151
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP--DPDLII 186
+ +A Y + E+ AIK I Q I++ + +D+ I+K+L T+ +P +PDLII
Sbjct: 152 NYYVNVAIAYGGQQELVDAIKRIGQKIKNNEMDVNDISVETISKHLYTAHLPYQNPDLII 211
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE+R+S+FL+WQ +YSE F YWP+F + F A+ Y R RRFG
Sbjct: 212 RTSGEERISNFLIWQSSYSELYFCETYWPNFRKIDFLRAIRDYQRRKRRFG 262
>gi|90082170|dbj|BAE90366.1| unnamed protein product [Macaca fascicularis]
Length = 279
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 133/234 (56%), Gaps = 4/234 (1%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A+++ + P P HI IMDGN R+A + R GH +G E + +GI +T+
Sbjct: 16 CANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R SE+ L+ L + S L + L+K+ + +RV+G+ L D+ ++
Sbjct: 76 YAFSIENFKRSKSEVDGLMDLARQKFSRLMEEQEKLQKHGVCIRVLGDLHLLPLDLQELI 135
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+A T+ L + F Y+SR EIS A++ + +E G + D+ SL+ K L T+
Sbjct: 136 AQAVQATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDISESLLDKCLYTN 195
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
P PD++IRT GE RLSDFLLWQ ++S VF P WP+++ F A+ Q+ +
Sbjct: 196 RSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQM 249
>gi|300858143|ref|YP_003783126.1| hypothetical protein cpfrc_00725 [Corynebacterium
pseudotuberculosis FRC41]
gi|300685597|gb|ADK28519.1| hypothetical protein cpfrc_00725 [Corynebacterium
pseudotuberculosis FRC41]
gi|302205864|gb|ADL10206.1| Putative undecaprenyl pyrophosphate synthetase [Corynebacterium
pseudotuberculosis C231]
gi|302330422|gb|ADL20616.1| Putative undecaprenyl pyrophosphate synthetase [Corynebacterium
pseudotuberculosis 1002]
gi|308276099|gb|ADO25998.1| Putative undecaprenyl pyrophosphate synthetase [Corynebacterium
pseudotuberculosis I19]
Length = 265
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 131/242 (54%), Gaps = 7/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLT 59
++ + + P H+ I+ DGN RWA G GHR G + E+V + ++ +T
Sbjct: 25 LLREIAGAKQPSHVAIMCDGNRRWAREAGFADVTHGHRVGAKKVGEMVRWCKDTDVELVT 84
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++ S N R E+ L +I + + + + N ++R++G+ L ++ +
Sbjct: 85 VYLLSTENLGRASDELDMLFDIIGDVVDE--LAAPETNCRLRLVGHLDLLPPEVAERMNY 142
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQ-DIESGS---VCSHDVDSSLIAKYLD 175
A+++T NTG+ + +A Y R EI A++ + ++ESG+ + V I+K+L
Sbjct: 143 AQEKTAHNTGVAVNVAVGYGGRQEIVDAVRELISGEVESGTEPEKIADKVTVESISKHLY 202
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
TS PDPDL+IRT GE+RLS FLLWQ AYSE F YWP F R F AL +Y+ R RR
Sbjct: 203 TSGQPDPDLVIRTSGEQRLSGFLLWQAAYSEIWFTDTYWPAFRRVDFLRALREYSKRSRR 262
Query: 236 FG 237
FG
Sbjct: 263 FG 264
>gi|301755046|ref|XP_002913352.1| PREDICTED: dehydrodolichyl diphosphate synthase-like [Ailuropoda
melanoleuca]
Length = 334
Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 132/234 (56%), Gaps = 4/234 (1%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A+++ + P P HI IMDGN R+A + R GH +G E + +GI +T+
Sbjct: 16 CANIIKAGPMPKHIAFIMDGNRRYARKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R SE+ L+ L + S L + L+K+ + +RV+G+ L D+ ++
Sbjct: 76 YAFSIENFKRSKSEVDGLMDLARQKFSRLMEEQEKLQKHGVCIRVLGDLHLLPLDLQELI 135
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+A T+ L + F Y+SR EIS A++ + +E G + DV SL+ K L T+
Sbjct: 136 AQAVQATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDVSESLLDKCLYTN 195
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
P PD++IRT GE RLSDFLLWQ ++S VF P WP+++ A+ QY +
Sbjct: 196 HSPQPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLCEAILQYQM 249
>gi|114554917|ref|XP_001143091.1| PREDICTED: dehydrodolichyl diphosphate synthase isoform 1 [Pan
troglodytes]
Length = 275
Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 133/234 (56%), Gaps = 4/234 (1%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A+++ + P P HI IMDGN R+A + R GH +G E + +GI +T+
Sbjct: 16 CANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R SE+ L+ L + S L + L+K+ + +RV+G+ L D+ ++
Sbjct: 76 YAFSIENFKRSKSEVDGLMDLARQKFSRLMEEQEKLQKHGVCIRVLGDLHLLPLDLQELI 135
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+A T+ L + F Y+SR EIS A++ + +E G + D+ SL+ K L T+
Sbjct: 136 AQAVQATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDISESLLDKCLYTN 195
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
P PD++IRT GE RLSDFLLWQ ++S VF P WP+++ F A+ Q+ +
Sbjct: 196 RSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQM 249
>gi|149535422|ref|XP_001507272.1| PREDICTED: similar to dehydrodolichyl diphosphate synthase, partial
[Ornithorhynchus anatinus]
Length = 255
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 133/235 (56%), Gaps = 4/235 (1%)
Query: 1 MVASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ A+++ + P P HI IMDGN R+A + R GH +G + E + +G+ +T
Sbjct: 15 LCANIIKAGPMPKHIAFIMDGNRRYAQKCQVERQQGHSQGFDKLAETLRWCLNLGVHEVT 74
Query: 60 IFAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCV 116
++AFSI N++R E+ L+ L + + L + L+K+ + +RV+G+ L D+ +
Sbjct: 75 VYAFSIENFKRTKDEVDGLMDLARQKFTRLLEEQEKLRKHGVCIRVLGDLHLLPRDLREL 134
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT 176
+ A TR + L + F Y+SR EIS A++ + +E G + DV L+ + L T
Sbjct: 135 IARAVRATRSYSKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLKPSDVSEGLLDRCLYT 194
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
+ PDPD++IRT GE RLSDFLLWQ ++S VF P WP+++ AL Q+ +
Sbjct: 195 NHSPDPDILIRTSGEVRLSDFLLWQTSHSCLVFQPMLWPEYTFWNLCEALLQFQV 249
>gi|325002198|ref|ZP_08123310.1| undecaprenyl pyrophosphate synthase [Pseudonocardia sp. P1]
Length = 256
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 127/238 (53%), Gaps = 8/238 (3%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ P H+ +I+DGN RWA GL A GHR G E++ +E G++ +T+F S
Sbjct: 21 GAESPKHVALILDGNRRWAREAGLADPAEGHRAGAAKIAEMLGWCSEAGVEVVTVFLLST 80
Query: 66 NNW-RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
+N R E+ +L+++I + S ++RV+G L + L A +T
Sbjct: 81 DNLDTRSPDELKDLLEIIGGVVDD--LSGPDTPWRLRVVGAMELLPKSLADRLAAAVART 138
Query: 125 RLNTGLNLFIAFNYSSRDEISRAI-KNIFQDIESGSV---CSHDVDSSLIAKYLDTSDVP 180
GL L +A Y R EI+ A+ K + E+G + +D IA++L TS P
Sbjct: 139 GERGGLQLNVAVGYGGRQEIADAVRKMLLSQAEAGRTIEELAETLDVDHIAEHLYTSGQP 198
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DPDL+IRT GE+RLS FLLWQ A+SEF F YWP+F R F AL + R RRFGG
Sbjct: 199 DPDLVIRTSGEQRLSGFLLWQSAHSEFWFCEAYWPEFRRVDFLRALRDFAARHRRFGG 256
>gi|223998744|ref|XP_002289045.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976153|gb|EED94481.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 250
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/250 (37%), Positives = 130/250 (52%), Gaps = 27/250 (10%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIE-VFNEIVAAAAEVGIKNLT------------ 59
HI I DGN RWA LP+ GH G + V N I + + LT
Sbjct: 2 HIAFICDGNSRWARQNMLPKSMGHAAGADRVMNTITSLKQRQTLSQLTTTDGEDTRKQHT 61
Query: 60 -----IFAFSINNWRRPVSEISELVKLIK--SFLKKGFYSLKKNNIKVRVIGNRLSLDDD 112
+FAFS NW RP SEI+ L KL++ + + ++++ I++ ++G+ L+D+
Sbjct: 62 IEYCTLFAFSTENWSRPSSEITTLFKLMERIAIQYRQHDAIREGKIQIDLLGD---LNDE 118
Query: 113 ILCVLKEAEDQTRLNTG---LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV-DSS 168
+ E Q N L + +A NY R +I +A +++ Q I SG + + + S
Sbjct: 119 RIPEGARRELQREENAHADILTICLAINYGGRADILQAARSLAQSIASGELSLDAIHNES 178
Query: 169 LIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQ 228
I+K L T +PDPDL+IRTGGEKRLS+FLLW AY+E F WPDF E AL
Sbjct: 179 EISKRLSTVHLPDPDLVIRTGGEKRLSNFLLWNAAYAELYFTDILWPDFDNEALEEALVW 238
Query: 229 YNLRDRRFGG 238
Y R RRFGG
Sbjct: 239 YGDRSRRFGG 248
>gi|254381930|ref|ZP_04997293.1| undecaprenyl pyrophosphate synthetase 1 [Streptomyces sp. Mg1]
gi|194340838|gb|EDX21804.1| undecaprenyl pyrophosphate synthetase 1 [Streptomyces sp. Mg1]
Length = 253
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 131/233 (56%), Gaps = 7/233 (3%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P HIG+I+DGN RWA A G GH+ G + +E++ E ++ +T++ S +N
Sbjct: 23 AAPKHIGVILDGNRRWAKASGGTTEQGHQAGADKISEMLGWCTETDVEVVTLWMLSTDNL 82
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+ L+ +I++ ++ G + +V +GN L + VLKEAE T
Sbjct: 83 DRPEVELRPLLNIIENTVR-GLAA--DGRWRVHHVGNLDILPERTQSVLKEAEQATHDVD 139
Query: 129 GLNLFIAFNYSSRDEISRAIKNIF-QDIESGSV---CSHDVDSSLIAKYLDTSDVPDPDL 184
G+ + +A Y R EI+ A++++ + E G+ + +D IA++L T PDPDL
Sbjct: 140 GILVNVAVGYGGRQEIADAVRSLLLEHAEKGTSFEELAEILDIDHIAEHLYTRGQPDPDL 199
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+IRT GE+RLS F+LWQ A+SE+ F +WP F + F AL Y R RR+G
Sbjct: 200 VIRTSGEQRLSGFMLWQSAHSEYYFCEVFWPAFRKVDFLRALRDYAARHRRYG 252
>gi|325969297|ref|YP_004245489.1| undecaprenyl pyrophosphate synthase [Vulcanisaeta moutnovskia
768-28]
gi|323708500|gb|ADY01987.1| Undecaprenyl pyrophosphate synthase [Vulcanisaeta moutnovskia
768-28]
Length = 238
Score = 149 bits (375), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 90/237 (37%), Positives = 136/237 (57%), Gaps = 5/237 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M + P H+G+I DGN RWA GLP +R G + E + + + GIK +T++ S
Sbjct: 1 MPGAVPVHVGVIPDGNRRWARKVGLPITEAYRIGSDKVEEFLDWSLDFGIKVVTVYVLST 60
Query: 66 NNW-RRPVSEISELVKLIKSFLKKGFYSLK--KNNIKVRVIGNRLSLDDDILCVLKEAED 122
N+ RR E+ L L+K L K ++ +N ++VRVIG L +D+ ++ E+
Sbjct: 61 ENFLRRSKLELDLLYSLLKEKLIKIRRDVRIHRNRVRVRVIGRTWLLPEDVRREIELTEE 120
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD--VP 180
T + L +A Y R EI A+K + D SG V D+D + + KYL +D P
Sbjct: 121 TTADYSDHYLNLAVVYGGRQEIIDAMKKLLIDYNSGKVNISDLDENALFKYLYVNDEPYP 180
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+PDL+IRTGGE R+S+FLL++ AYSE + +YWP+ +RE A+++Y R+RRFG
Sbjct: 181 EPDLVIRTGGEHRISNFLLYETAYSELYILNKYWPEITREDLKQAIDEYERRERRFG 237
>gi|311900706|dbj|BAJ33114.1| putative undecaprenyl diphosphate synthase [Kitasatospora setae
KM-6054]
Length = 269
Score = 149 bits (375), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 129/234 (55%), Gaps = 8/234 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW- 68
P HIG+IMDGN RWA RGL GHR G ++ +G++++T+F S N
Sbjct: 36 PRHIGLIMDGNRRWARERGLADTRLGHRHGARHAGAVLGWCEALGVRHVTVFVCSAENLE 95
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT-RLN 127
RR +E++ L+++I+ L + + +V + G+ +L D + L+ A D T
Sbjct: 96 RRGDAEVAFLMRVIEDVLARELAG-PRPRWRVHLAGDPATLPDSTVRALRRAVDATAHCA 154
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQ-DIESGS---VCSHDVDSSLIAKYLDTSDVPDPD 183
TG +L +A Y R E+ A++ + ++G + ++ + IA++L T+ PDPD
Sbjct: 155 TGAHLTLAVGYGGRQELVHAVRGLLNAHADTGRPVRALAEELTADHIARHLHTAGHPDPD 214
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
L+IRT GE+R+S+FLLWQ AY+E F +WP F F A+ Y R RR+G
Sbjct: 215 LVIRTSGEQRMSNFLLWQSAYAELYFADAHWPAFRELDFLRAVASYAARGRRYG 268
>gi|182436299|ref|YP_001824018.1| putative undecaprenyl diphosphate synthase [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|178464815|dbj|BAG19335.1| putative undecaprenyl diphosphate synthase [Streptomyces griseus
subsp. griseus NBRC 13350]
Length = 256
Score = 149 bits (375), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 130/232 (56%), Gaps = 7/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+I+DGN RWA A G GH+ G + +E++ E ++ +T++ S +N+ R
Sbjct: 28 PKHIGVILDGNRRWAKASGGSAVQGHQAGADKISELLGWCNETDVEVVTLWMLSTDNFDR 87
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ +I++ ++ +V +G L + VLKEA++ T G+
Sbjct: 88 PEHELKPLLGIIENTVRN---LAADGRWRVHHVGTLDLLPPETQTVLKEAQEATSDIDGI 144
Query: 131 NLFIAFNYSSRDEISRAIKNIF-QDIESGSV---CSHDVDSSLIAKYLDTSDVPDPDLII 186
+ +A Y R EI+ A++++ + E G+ + V + LI+++L T PDPDL+I
Sbjct: 145 IVNVAVGYGGRQEIADAVRSLLLEHSEKGTTFEELAEVVSTDLISEHLYTRGQPDPDLVI 204
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
RT GE+RLS F+LWQ A+SE+ F +WP F + F AL Y R RR+G
Sbjct: 205 RTSGEQRLSGFMLWQSAHSEYYFCEVFWPAFRKVDFLRALRDYAARHRRYGA 256
>gi|326776928|ref|ZP_08236193.1| Undecaprenyl pyrophosphate synthase [Streptomyces cf. griseus
XylebKG-1]
gi|326657261|gb|EGE42107.1| Undecaprenyl pyrophosphate synthase [Streptomyces cf. griseus
XylebKG-1]
Length = 253
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 130/231 (56%), Gaps = 7/231 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+I+DGN RWA A G GH+ G + +E++ E ++ +T++ S +N+ R
Sbjct: 25 PKHIGVILDGNRRWAKASGGSAVQGHQAGADKISELLGWCNETDVEVVTLWMLSTDNFDR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ +I++ ++ +V +G L + VLKEA++ T G+
Sbjct: 85 PEHELKPLLGIIENTVRN---LAADGRWRVHHVGTLDLLPPETQTVLKEAQEATSDIDGI 141
Query: 131 NLFIAFNYSSRDEISRAIKNIF-QDIESGSV---CSHDVDSSLIAKYLDTSDVPDPDLII 186
+ +A Y R EI+ A++++ + E G+ + V + LI+++L T PDPDL+I
Sbjct: 142 IVNVAVGYGGRQEIADAVRSLLLEHSEKGTTFEELAEVVSTDLISEHLYTRGQPDPDLVI 201
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE+RLS F+LWQ A+SE+ F +WP F + F AL Y R RR+G
Sbjct: 202 RTSGEQRLSGFMLWQSAHSEYYFCEVFWPAFRKVDFLRALRDYAARHRRYG 252
>gi|206563907|ref|YP_002234670.1| putative undecaprenyl pyrophosphate synthetase [Burkholderia
cenocepacia J2315]
gi|198039947|emb|CAR55925.1| putative undecaprenyl pyrophosphate synthetase [Burkholderia
cenocepacia J2315]
Length = 256
Score = 148 bits (374), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 134/240 (55%), Gaps = 8/240 (3%)
Query: 3 ASMMSSSPP--DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A++ ++ PP H+ +I+DGN RWA GLP G+R G + +++ E GI +T+
Sbjct: 19 AALDTARPPLPTHLAVILDGNRRWADRLGLPAADGYRAGGRNVHALLSWCEETGIPFVTL 78
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S N +R E+ +L+ +I + ++ VIG+ L ++ A
Sbjct: 79 WPLSTENLQRDAGELRDLLAVIGDVFDE---LAACGRWRLHVIGDLTQLPPATAERIRAA 135
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKN-IFQDIESGSVCS--HDVDSSLIAKYLDTS 177
+ +T GL++ IA YS R ++ A+++ I + + +G+V + LIA L T+
Sbjct: 136 QQRTAHARGLDVNIAVAYSGRLDLLHAVRSLIAEHVAAGTVEQLLAQLSPELIASRLYTA 195
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
P+PDL+IRT GE+RLS+F+LWQ A+SEF F P WPDF R+ F A++ Y R RRFG
Sbjct: 196 GQPEPDLVIRTSGEQRLSNFMLWQTAFSEFYFTPTCWPDFGRDDFEQAIDAYGKRARRFG 255
>gi|281351599|gb|EFB27183.1| hypothetical protein PANDA_001151 [Ailuropoda melanoleuca]
Length = 320
Score = 148 bits (373), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 126/224 (56%), Gaps = 3/224 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IMDGN R+A + R GH +G E + +GI +T++AFSI N++R
Sbjct: 12 PKHIAFIMDGNRRYARKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTVYAFSIENFKR 71
Query: 71 PVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
SE+ L+ L + S L + L+K+ + +RV+G+ L D+ ++ +A T+
Sbjct: 72 SKSEVDGLMDLARQKFSRLMEEQEKLQKHGVCIRVLGDLHLLPLDLQELIAQAVQATKNY 131
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L + F Y+SR EIS A++ + +E G + DV SL+ K L T+ P PD++IR
Sbjct: 132 NKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDVSESLLDKCLYTNHSPQPDILIR 191
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
T GE RLSDFLLWQ ++S VF P WP+++ A+ QY +
Sbjct: 192 TSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLCEAILQYQM 235
>gi|305432151|ref|ZP_07401317.1| di-trans,poly-cis-decaprenylcistransferase [Campylobacter coli
JV20]
gi|304444816|gb|EFM37463.1| di-trans,poly-cis-decaprenylcistransferase [Campylobacter coli
JV20]
Length = 222
Score = 148 bits (373), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 130/226 (57%), Gaps = 11/226 (4%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ ++MDGN RWA A+G G+ +G++ +++ A E GI NL++FAFS NW RP
Sbjct: 6 HLAVVMDGNRRWAKAKGFLAKLGYSQGVKTMQKLMEACVEEGISNLSLFAFSTENWNRPQ 65
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
EI + +L+ L + +KNN+++R IG+ LD + + E++T+ L +
Sbjct: 66 DEIEFIFELLDRCLDEALKEFEKNNVRLRAIGDLSRLDTHLQEKIALVEEKTKHCDLLCV 125
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP-DPDLIIRTGGE 191
+A +Y ++DEI R++K + IE G +++ I+ D D+P D DL++R G
Sbjct: 126 NLAISYGAKDEIVRSVKRL---IEKGL----EINEKNIS---DNLDLPLDVDLMLRVGNA 175
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
KRLS+FLLWQ AY+E F +P ++ F + ++ R+R FG
Sbjct: 176 KRLSNFLLWQCAYAEIYFSETLFPSLTKREFKKIIKEFRKRERTFG 221
>gi|68467877|ref|XP_722097.1| hypothetical protein CaO19.11511 [Candida albicans SC5314]
gi|68468194|ref|XP_721936.1| hypothetical protein CaO19.4028 [Candida albicans SC5314]
gi|46443879|gb|EAL03158.1| hypothetical protein CaO19.4028 [Candida albicans SC5314]
gi|46444045|gb|EAL03323.1| hypothetical protein CaO19.11511 [Candida albicans SC5314]
gi|238882906|gb|EEQ46544.1| dehydrodolichyl diphosphate synthetase [Candida albicans WO-1]
Length = 328
Score = 148 bits (373), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 83/218 (38%), Positives = 127/218 (58%), Gaps = 8/218 (3%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+M+ P H+GIIMDGN R+A + GH G + I+ E G+K T++AFS
Sbjct: 26 IMTGPVPQHVGIIMDGNRRYAKTHKIEIKEGHSLGFDTMASILELLYESGVKCATVYAFS 85
Query: 65 INNWRRPVSEISELVKLIKS-FLKKGFYSL--KKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R E+ L++L KS F + + L ++ +K+R++GN L D+L +L++ E
Sbjct: 86 IENFKRSQYEVKWLMELAKSKFTQINQHGLLCEEYGVKIRILGNTKLLPRDVLEILEKTE 145
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ T+ NT L + F Y+SRDEI+ +IK++ + G + D+ I ++L T DVP
Sbjct: 146 EITKNNTRAVLNVCFPYTSRDEITHSIKSVVDEATKGGI---DITEEAIDRHLYTKDVPP 202
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSE--FVFIPEYWPDF 217
DL++RT G RLSDFLLWQ E VF+ + WP F
Sbjct: 203 LDLLVRTSGTFRLSDFLLWQTVSPECAVVFVDKLWPAF 240
>gi|73950553|ref|XP_854980.1| PREDICTED: similar to dehydrodolichyl diphosphate synthase isoform
a [Canis familiaris]
Length = 334
Score = 148 bits (373), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 131/234 (55%), Gaps = 4/234 (1%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A+++ + P P HI IMDGN R+A + R GH +G E + +GI +T+
Sbjct: 16 CANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R SE+ L+ L + S L + L+K+ + +RV+G+ L D+ ++
Sbjct: 76 YAFSIENFKRSKSEVDGLMDLARQKFSRLMEEQEKLQKHGVCIRVLGDLHLLPLDLQELI 135
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+A T+ L + F Y+SR EIS A++ + +E G + DV SL+ K L T+
Sbjct: 136 AQAVRATKHYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDVSESLLDKCLYTN 195
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
P PD++IRT GE RLSDFLLWQ ++ VF P WP+++ A+ QY +
Sbjct: 196 HSPHPDILIRTSGEVRLSDFLLWQTSHCCLVFQPVLWPEYTFWNLCEAILQYQM 249
>gi|62389881|ref|YP_225283.1| undecaprenyl pyrophosphate synthase [Corynebacterium glutamicum
ATCC 13032]
gi|145295141|ref|YP_001137962.1| undecaprenyl pyrophosphate synthase [Corynebacterium glutamicum R]
gi|41325217|emb|CAF19697.1| PUTATIVE UNDECAPRENYL PYROPHOSPHATE SYNTHETASE [Corynebacterium
glutamicum ATCC 13032]
gi|140845061|dbj|BAF54060.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 256
Score = 148 bits (373), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 130/242 (53%), Gaps = 7/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLT 59
++ + + P H+ I+ DGN RWA G + GHR G + E+V +V + +T
Sbjct: 16 LLRELDGAKQPGHVAIMCDGNRRWAREAGFTDVSHGHRVGAKKIGEMVRWCDDVDVNLVT 75
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++ S+ N R E+ L +I + + + N +VR++G+ L D + C L++
Sbjct: 76 VYLLSMENLGRSSEELQLLFDIIADVADE--LARPETNCRVRLVGHLDLLPDPVACRLRK 133
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLD 175
AE+ T NTG+ + +A Y R EI A++ + + + ++ S+ I+ +L
Sbjct: 134 AEEATVNNTGIAVNMAVGYGGRQEIVDAVQKLLTIGKDEGLSVDELIESVKVDAISTHLY 193
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
TS PDPDL+IRT GE+RLS F+LWQ AYSE F YWP F R F A+ Y+ R RR
Sbjct: 194 TSGQPDPDLVIRTSGEQRLSGFMLWQSAYSEIWFTDTYWPAFRRIDFLRAIRDYSQRSRR 253
Query: 236 FG 237
FG
Sbjct: 254 FG 255
>gi|226322654|ref|ZP_03798172.1| hypothetical protein COPCOM_00426 [Coprococcus comes ATCC 27758]
gi|225208991|gb|EEG91345.1| hypothetical protein COPCOM_00426 [Coprococcus comes ATCC 27758]
Length = 143
Score = 148 bits (373), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 67/139 (48%), Positives = 99/139 (71%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI II+DGNGRWA A+G+PR GH +G + +I AA ++G+K LT++AFS NW R
Sbjct: 4 PQHIAIILDGNGRWAKAKGMPRNYGHVQGSKNVEKICEAAYKMGVKYLTVYAFSTENWSR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE+ L+KL+++++K + +KN ++VRVIG++ LD+DI +KE E+ ++ N GL
Sbjct: 64 PKSEVDALMKLLRNYMKTCLKTAEKNRMRVRVIGDKTGLDEDIRTRIKELEEASKNNDGL 123
Query: 131 NLFIAFNYSSRDEISRAIK 149
N IA NY SRDE+ RA++
Sbjct: 124 NFQIAINYGSRDEMIRAMR 142
>gi|260906823|ref|ZP_05915145.1| short-chain Z-isoprenyl diphosphate synthase [Brevibacterium linens
BL2]
Length = 253
Score = 147 bits (372), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 125/234 (53%), Gaps = 15/234 (6%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+G+I DGN RWA G GHR G E E + E+ + +T++ S N R
Sbjct: 27 PRHVGVITDGNRRWAKEFGATTADGHRAGAEKIVEFLGWCDEIDVDIVTLYVLSKENLAR 86
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+++I ++K +L N ++V+++G+ L + L+ A + +
Sbjct: 87 SAEEVEVLIEIISDLVEK-IAAL--NGVRVQLVGDLEILPPGLRARLEAATSEGDCQMRV 143
Query: 131 NLFIAFNYSSRDEISRAIKNIFQ-------DIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
N +A Y R EI A+K++ + D+E+ ++ I+++L T PDPD
Sbjct: 144 N--VAVGYGGRQEIVNAVKSLLRLRTDEGTDLET---IISELSPQQISEHLYTKGQPDPD 198
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
LIIR+ GE+RLS FL+WQ AYSEF F YWPDF R F A+ Y LR RRFG
Sbjct: 199 LIIRSSGEQRLSGFLMWQSAYSEFYFCEAYWPDFRRTDFLRAVRDYGLRQRRFG 252
>gi|225706224|gb|ACO08958.1| Dehydrodolichyl diphosphate synthase [Osmerus mordax]
Length = 350
Score = 147 bits (372), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 131/233 (56%), Gaps = 3/233 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M S P H+ IMDGN R+A + + R GH +G + E + + I +T++AFS
Sbjct: 21 MAGPSMPKHVAFIMDGNRRYARKQHVERQDGHTQGFDKLAETLRWCLHLNIPEVTVYAFS 80
Query: 65 INNWRRPVSEISELVKLIKS-FLK--KGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R E+ L++L K FLK + +L+K+ + +RV+G+ L D+ + A
Sbjct: 81 IENFKRSKEEVDGLMELAKQKFLKLLEEQENLEKHGVCIRVLGDLNMLPLDLQQAIARAV 140
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
TR + L + F Y+SR EI+ A++ + +E G + S DV L+++ L + + P+
Sbjct: 141 VSTRTHNKCFLNVCFAYTSRYEITNAVREMAWGVEQGLLKSSDVSEGLLSQCLYSRNSPN 200
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
PDL+IRT GE RLSDFLLWQ ++S VF WP++S A+ QY R
Sbjct: 201 PDLLIRTSGEVRLSDFLLWQTSHSCLVFQTVLWPEYSFWNLCEAILQYQFNYR 253
>gi|295395786|ref|ZP_06805974.1| di-trans,poly-cis-decaprenylcistransferase [Brevibacterium
mcbrellneri ATCC 49030]
gi|294971321|gb|EFG47208.1| di-trans,poly-cis-decaprenylcistransferase [Brevibacterium
mcbrellneri ATCC 49030]
Length = 257
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 126/232 (54%), Gaps = 8/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+G+I DGN RWA G GHR G + E + E+GI+ +T++ S N +R
Sbjct: 28 PRHVGVITDGNRRWAKEFGATTEQGHRAGAQKIVEFLGWCDEIGIEVVTLYVLSRENLQR 87
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL-NTG 129
E+ LV +I +++ + + V ++G+ L + + L+ A++++R
Sbjct: 88 TPEEVETLVAIISDMVEQ---IAQSDTYAVNLVGDLSVLPEPLRARLENAQERSRGGQPS 144
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDVPDPDLI 185
+++ +A Y R EI AIK+ + + D ++L +A++L T PDPDLI
Sbjct: 145 VHVNVAVGYGGRQEIVNAIKSYLRAESAAGTSMEDAINALTEERLAEHLYTKGQPDPDLI 204
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IR+ GE+RLS FL+WQ AYSEF F YWP F + F A+ Y+ R RR+G
Sbjct: 205 IRSSGEQRLSGFLIWQSAYSEFFFCEAYWPAFRKTDFLRAVRDYSQRQRRYG 256
>gi|169628302|ref|YP_001701951.1| short-chain Z-isoprenyl diphosphate synthetase [Mycobacterium
abscessus ATCC 19977]
gi|169240269|emb|CAM61297.1| Probable short-chain Z-isoprenyl diphosphate synthetase
[Mycobacterium abscessus]
Length = 260
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 133/238 (55%), Gaps = 7/238 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ +S P HI ++ DGN RWA + G + G+R G +E++ + G++ T++
Sbjct: 24 LVKASKPRHIAVLCDGNRRWARSAGYTDVSHGYRMGARKISEMLGWCQDAGVEMATVYLL 83
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S N R +++EL+++I +++ +N VR +G+ L D++ +++A
Sbjct: 84 SAENLTRDPDQLTELLEIITDVVEE--LCAPQNKWSVRSVGDLDLLPDEVAERMRQAVKS 141
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDS---SLIAKYLDTSDV 179
+ G ++ +A Y R EI+ A++ + +++ +G+ V + I++ L TS
Sbjct: 142 APSDAGFHVNVAVGYGGRQEITDAVRTLLNKELANGASAEQLVQAVTVDAISENLYTSGQ 201
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDPDL+IRT GE+RLS FLLWQ AYSE F YWP+F R F AL Y R+RRFG
Sbjct: 202 PDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTDAYWPEFRRVDFLRALRDYAARNRRFG 259
>gi|302536608|ref|ZP_07288950.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. C]
gi|302445503|gb|EFL17319.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. C]
Length = 253
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 129/233 (55%), Gaps = 7/233 (3%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P HIG+I+DGN RWA A G GH+ G + +E++ E ++ +T++ S +N
Sbjct: 23 ASPKHIGVILDGNRRWAKASGGTTEQGHQAGADKISEMLGWCTETDVEVVTLWMLSTDNL 82
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+ L+ +I++ ++ + +V +GN L VLKEAE T
Sbjct: 83 DRPEVELRPLLNIIENTVRG---LAEDGRWRVHHVGNLDILPARTQTVLKEAEQATHDID 139
Query: 129 GLNLFIAFNYSSRDEISRAIKNIF-QDIESGSV---CSHDVDSSLIAKYLDTSDVPDPDL 184
G+ + +A Y R EI+ A++++ + E G+ + +D IA++L T PDPDL
Sbjct: 140 GILVNVAVGYGGRQEIADAVRSLLLEHAEKGTSFEELAEVLDIDHIAEHLYTRGQPDPDL 199
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+IRT GE+RLS F+LWQ A+SE+ F +WP F + F AL Y R RR+G
Sbjct: 200 VIRTSGEQRLSGFMLWQSAHSEYYFCEVFWPAFRKVDFLRALRDYAARHRRYG 252
>gi|331694815|ref|YP_004331054.1| Undecaprenyl pyrophosphate synthase [Pseudonocardia dioxanivorans
CB1190]
gi|326949504|gb|AEA23201.1| Undecaprenyl pyrophosphate synthase [Pseudonocardia dioxanivorans
CB1190]
Length = 255
Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/240 (37%), Positives = 129/240 (53%), Gaps = 11/240 (4%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ ++ P H+ +++DGN RWA GL GHR G +++ E ++ +T+F
Sbjct: 19 LETAERPRHVALMLDGNRRWARDAGLVDVNDGHRVGAAKIGDLLEWCREADVEVVTLFLL 78
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S +N R E+ L+++I + + + ++RV+G L ++I L A +
Sbjct: 79 STDNLTRAADELEPLLEIIADVVDE--LAGPGRPWQLRVVGALELLPEEIASRLSAATSR 136
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSH-----DVDSSLIAKYLDTS 177
T +GL + +A Y R EI+ A++ + Q ESG+ DVD IA +L TS
Sbjct: 137 TVGRSGLQVNVAVGYGGRQEIADAVRKLLLQHAESGTSIEELADVLDVDH--IAAHLYTS 194
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDPDLIIRT GE+RLS FLLWQ A+SEF F YWP+F R F AL Y R RRFG
Sbjct: 195 GQPDPDLIIRTSGEQRLSGFLLWQSAHSEFWFCEAYWPEFRRVDFLRALRDYAARHRRFG 254
>gi|50549041|ref|XP_501991.1| YALI0C18799p [Yarrowia lipolytica]
gi|49647858|emb|CAG82311.1| YALI0C18799p [Yarrowia lipolytica]
Length = 267
Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 136/247 (55%), Gaps = 5/247 (2%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
VA ++++ P P H+ +MDGN R+A R L GH KG E +I+ + G++++T+
Sbjct: 19 VARILATGPVPRHVAFVMDGNRRYARERQLETREGHSKGFESLAQILELCYDAGVEDVTV 78
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
FAFSI N++R E+ L+++ K L + S ++ I++RV+GNR L D+ +
Sbjct: 79 FAFSIENFKRTPREVESLMEIAKERLTQICESGELAEQYGIRIRVLGNRSLLRKDVAELF 138
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+A+ T+ +T L I F Y+SRD+I+ I+ + +D E G + D+ +A ++ T
Sbjct: 139 DKAQTMTKGHTRATLNICFPYTSRDDIAHGIRGVVRDAEKGEIEPADITEQTLASHMYTG 198
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFV-FIPEYWPDFSRELFFHALNQYNLRDRRF 236
+ P D++IRT G R SDF+LW+ + F+ WPDF L +++ R
Sbjct: 199 NSPPLDILIRTSGVCRFSDFMLWESHQGAHIEFVDTLWPDFGVWRMLAILLKWSWRKAYL 258
Query: 237 GGLSKKG 243
+++G
Sbjct: 259 ADQAEQG 265
>gi|50955271|ref|YP_062559.1| undecaprenyl pyrophosphate synthetase [Leifsonia xyli subsp. xyli
str. CTCB07]
gi|50951753|gb|AAT89454.1| undecaprenyl pyrophosphate synthetase [Leifsonia xyli subsp. xyli
str. CTCB07]
Length = 264
Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 133/242 (54%), Gaps = 9/242 (3%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTI 60
+A++ + P H+ +I+DGN RWA GL A GHR G E + ++GI +T+
Sbjct: 25 LAALGVEALPKHVAMIIDGNRRWARQAGLTTVAHGHRAGAAKMREFLKWCDDLGIAVVTL 84
Query: 61 FAFSINNW-RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
+ S +N R +E+++L+++I + + + +V+ +G+ L D + L
Sbjct: 85 YLLSSDNLTNRESAELADLIEIIAELAED---LSRYRHWRVKHVGSAAGLSDPLGAALTG 141
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIF--QDIESGSV--CSHDVDSSLIAKYLD 175
AED+T N G+++ +A Y R EI+ AI++I E GS+ + + I +L
Sbjct: 142 AEDRTAANEGMHINLAVGYGGRKEITDAIRSIVAAHQAEGGSLETLADLLTPDFIGAHLY 201
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
T PDPDL+IRT GE+RLSDF+LWQ A+SEF F+ PD F A+ Y+ R RR
Sbjct: 202 TGGQPDPDLVIRTSGEQRLSDFMLWQSAHSEFYFVEALGPDLREVDFLRAVRDYSRRQRR 261
Query: 236 FG 237
FG
Sbjct: 262 FG 263
>gi|154507710|ref|ZP_02043352.1| hypothetical protein ACTODO_00191 [Actinomyces odontolyticus ATCC
17982]
gi|153797344|gb|EDN79764.1| hypothetical protein ACTODO_00191 [Actinomyces odontolyticus ATCC
17982]
Length = 253
Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 129/239 (53%), Gaps = 7/239 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + ++ P HIG+I+DGN RWA + G GHR G +E + + + G+ +T++
Sbjct: 17 AELSDAAVPAHIGVILDGNRRWAKSLGATASQGHRAGAGKISEFLQWSDDAGVSIVTLWL 76
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
S +N R E+ EL+++I + + K+ V+G+ L + + L+ +
Sbjct: 77 LSTDNLSRDAGELGELLRIICEAVS---LLADQGRWKLAVVGDLSLLPEKVSEDLRASVA 133
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIES-GSVCSHDVDS---SLIAKYLDTSD 178
+T G+ + IA Y R EI+ A++++ ++ + G DS + I +L T D
Sbjct: 134 RTADVQGMTVNIAVGYGGRHEITEAVRSMMREASAQGRTLDELADSFTDADITAHLYTKD 193
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDPDL+IRT GE+RLS F+LWQ +SE+ F YWPDF R F AL Y R+RR G
Sbjct: 194 QPDPDLVIRTSGEQRLSGFMLWQSVHSEYYFCEVYWPDFRRVDFLRALRSYAQRERRMG 252
>gi|149694217|ref|XP_001504138.1| PREDICTED: similar to Dehydrodolichyl diphosphate synthase [Equus
caballus]
Length = 333
Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 132/234 (56%), Gaps = 4/234 (1%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A+++ + P P HI IMDGN R+A + R GH +G E + +G+ +T+
Sbjct: 16 CANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGVLEVTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R SE+ L+ L + S L + L+K+ + +RV+G+ L D+ ++
Sbjct: 76 YAFSIENFKRSKSEVDGLMDLARQKFSRLMEEQEKLQKHGVCIRVLGDLHLLPLDLQELI 135
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+A T+ L + F Y+SR EIS A++ + +E G + DV SL+ K L T+
Sbjct: 136 AQAVQATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDVSESLLDKCLYTN 195
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
P PD++IRT GE RLSDFLLWQ ++S VF P WP+++ A+ Q+ +
Sbjct: 196 HSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLCEAILQFQM 249
>gi|302759661|ref|XP_002963253.1| hypothetical protein SELMODRAFT_79880 [Selaginella moellendorffii]
gi|300168521|gb|EFJ35124.1| hypothetical protein SELMODRAFT_79880 [Selaginella moellendorffii]
Length = 253
Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 130/236 (55%), Gaps = 9/236 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVF----NEIVAAAAEVGIKNLTIFAFSIN 66
P+H+ +IMDGN RWA RG+ + R E EIV +++ GIK LT+FAFS
Sbjct: 13 PNHVAMIMDGNSRWAQVRGIAKERQLRAAAEACYSNAREIVRLSSDWGIKALTLFAFSTE 72
Query: 67 NWRRPVSEISELVKLIKSFLK-KGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
N+ RP E+ + ++ + L ++ + I+ IG+ L + + +A+ T
Sbjct: 73 NFLRPREEVDQWMQQLDRVLSLDDPATILLDGIQFHCIGDTARLPRPLQAKISDAQSITS 132
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYL----DTSDVPD 181
NTG+ L +A Y ++ + + + +++E G + ++D +AK L DV
Sbjct: 133 GNTGMKLVMAIGYGGHSDLVQTCQALAREVEQGKMAVEEIDQINLAKRLMLGERCEDVGA 192
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
P+L++RT GE+RLS+F+LW +AYSE VF + WPDF E + +AL ++ R R FG
Sbjct: 193 PELLVRTSGEQRLSNFMLWHLAYSELVFEKKLWPDFGEEEYKNALVEFQGRMRTFG 248
>gi|78365263|ref|NP_001030423.1| dehydrodolichyl diphosphate synthase isoform a [Bos taurus]
gi|61553431|gb|AAX46405.1| dehydrodolichyl diphosphate synthase isoform a [Bos taurus]
gi|296490002|gb|DAA32115.1| dehydrodolichyl diphosphate synthase isoform a [Bos taurus]
Length = 316
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 132/234 (56%), Gaps = 4/234 (1%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A+++ + P P HI IMDGN R+A + R GH +G E + +GI +T+
Sbjct: 16 CANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R SE+ L+ L + S L + L+K+ + +RV+G+ L D+ ++
Sbjct: 76 YAFSIENFKRSKSEVDGLMDLAREKFSRLMEEQEKLQKHGVCIRVLGDLHLLPLDLQELV 135
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+A T+ L + F Y+SR EIS A++ + +E G + DV SL+ K L T+
Sbjct: 136 AQAVQTTKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDVSESLLDKCLYTN 195
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
P PD++IRT GE RLSDFLLWQ ++S VF P WP+++ A+ Q+ +
Sbjct: 196 HSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLCEAILQFQM 249
>gi|293189383|ref|ZP_06608106.1| di-trans,poly-cis-decaprenylcistransferase [Actinomyces
odontolyticus F0309]
gi|292821846|gb|EFF80782.1| di-trans,poly-cis-decaprenylcistransferase [Actinomyces
odontolyticus F0309]
Length = 253
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 129/239 (53%), Gaps = 7/239 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + ++ P HIG+I+DGN RWA + G GHR G +E + + + G+ +T++
Sbjct: 17 AELSDAAVPAHIGVILDGNRRWAKSLGATASQGHRAGAGKISEFLQWSDDAGVSIVTLWL 76
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
S +N R E+ EL+++I + + K+ V+G+ L + + L+ +
Sbjct: 77 LSTDNLSRDAGELGELLRIICEAVS---LLADQGRWKLAVVGDLSLLPEKVAEDLRASVA 133
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIES-GSVCSHDVDS---SLIAKYLDTSD 178
+T G+ + IA Y R EI+ A++++ ++ + G DS + I ++ T D
Sbjct: 134 RTAGVQGMTVNIAVGYGGRHEITEAVRSMMREASAQGRTLDELADSFTDADITAHVYTKD 193
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDPDL+IRT GE+RLS F+LWQ +SE+ F YWPDF R F AL Y R+RR G
Sbjct: 194 QPDPDLVIRTSGEQRLSGFMLWQSVHSEYYFCEVYWPDFRRVDFLRALRSYAQRERRMG 252
>gi|325923974|ref|ZP_08185563.1| Undecaprenyl pyrophosphate synthetase [Xanthomonas gardneri ATCC
19865]
gi|325545557|gb|EGD16822.1| Undecaprenyl pyrophosphate synthetase [Xanthomonas gardneri ATCC
19865]
Length = 221
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 117/208 (56%)
Query: 35 GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLK 94
GHR G N + E G+ LT+FAFS NW RP E+ L+KL L + L+
Sbjct: 3 GHRAGARAVNRTIDFCLEKGVSALTLFAFSSENWGRPQEEVDALMKLFLHALDREVDELQ 62
Query: 95 KNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD 154
+ ++VR IG+R + + AE T N+ L L IA +Y R +I+ A + + ++
Sbjct: 63 RRGVQVRFIGDRSRFAAPLRERMAGAERITAANSRLVLSIAASYGGRQDIALAARALAEE 122
Query: 155 IESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYW 214
+ +G + +D +L+A + +D+P PDL IRTGG+ R+S+FLLWQ+AY+E F W
Sbjct: 123 VAAGRLQPQQIDEALLASRIALADLPAPDLFIRTGGDTRISNFLLWQLAYTELWFTETLW 182
Query: 215 PDFSRELFFHALNQYNLRDRRFGGLSKK 242
P+F + AL+ Y R+RRFG S +
Sbjct: 183 PEFDAAVLQQALDDYAGRERRFGLTSAQ 210
>gi|291298259|ref|YP_003509537.1| undecaprenyl diphosphate synthase [Stackebrandtia nassauensis DSM
44728]
gi|290567479|gb|ADD40444.1| undecaprenyl diphosphate synthase [Stackebrandtia nassauensis DSM
44728]
Length = 256
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/243 (35%), Positives = 131/243 (53%), Gaps = 9/243 (3%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLT 59
+A + P P H+G+++DGN RWA GL GHR+G E ++ E+G+ ++T
Sbjct: 15 LARQLEGKPLPQHVGVMVDGNRRWAKDMGLLNPNDGHREGAEHIKRLLRWCDEMGVGHVT 74
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++ S N RP +E+ L+++I+ + + + +R++G L V+K+
Sbjct: 75 VWLLSTENLSRPAAELDPLLQIIEDLAVE--LAEEGQPWGLRIVGALDLLPAKHATVIKD 132
Query: 120 AEDQTR-LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYL 174
A ++TR N G + +A Y EI+ A++++ Q+ G +V + IAK+L
Sbjct: 133 AAERTRDRNDGAIINLAICYGGHREIADAVRSLLQEYARGGKTLDEVADLIEEGHIAKHL 192
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
P PDL+IRT GE+RLS FLLWQ AYSEF F WPDF R F AL Y R R
Sbjct: 193 YLHGQPAPDLLIRTSGEQRLSGFLLWQSAYSEFYFCDMNWPDFRRVDFLRALRSYATRQR 252
Query: 235 RFG 237
RFG
Sbjct: 253 RFG 255
>gi|317471593|ref|ZP_07930937.1| di-trans,poly-cis-decaprenylcistransferase [Anaerostipes sp.
3_2_56FAA]
gi|316900908|gb|EFV22878.1| di-trans,poly-cis-decaprenylcistransferase [Anaerostipes sp.
3_2_56FAA]
Length = 178
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 103/156 (66%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M S P+H+ II+DGNGRWA R LPR GH +G + I+ A ++GIK LT++AFS
Sbjct: 1 MESMRVPEHVAIILDGNGRWAKKRFLPRNMGHAQGSKTVERIIEDAFDMGIKYLTVYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRRP E+ L+KL++ +LK KNN++VRVIG+ L +D+ +++ E+ +
Sbjct: 61 TENWRRPKDEVDALMKLLRDYLKTCIKRANKNNMRVRVIGDVTGLSEDLREKIEQLEEAS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSV 160
+ NTG+N IA NY SRDE+ RA+K + D+ +G++
Sbjct: 121 KGNTGINFTIALNYGSRDEMIRAMKKMAGDLLAGTL 156
>gi|18313705|ref|NP_560372.1| hypothetical protein PAE2942 [Pyrobaculum aerophilum str. IM2]
gi|42559855|sp|Q8ZU54|UPPS_PYRAE RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|18161258|gb|AAL64554.1| conserved hypothetical protein [Pyrobaculum aerophilum str. IM2]
Length = 238
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 127/232 (54%), Gaps = 9/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEV-GIKNLTIFAFSINNWR 69
P HI +I DGN R+A G+ ++KG+E + A E IKN+T FA S N +
Sbjct: 10 PTHIAVIPDGNRRYAKKTGIDFYHAYKKGVEKVRNFLTWALEFRDIKNVTFFALSTENLQ 69
Query: 70 RPVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
R E+ L ++ + L++ + N ++VR IG+R L ++ + E E T+
Sbjct: 70 RSKIELEILFRIFEDELRRTLEDPLIHDNKVRVRFIGDRSLLPGKVVKYIDELESVTKNY 129
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP--DPDLI 185
+ +L IA Y R EI R IK + SG V + + LDT +P +PD++
Sbjct: 130 SNYHLTIALGYGGRAEIVRCIKRVL----SGEVRLETFSEEELFQCLDTRGIPNPEPDVV 185
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+RTGGEKRLS+FLL+Q AYSE +F+ + WP+ RE + + +Y+ R RRFG
Sbjct: 186 VRTGGEKRLSNFLLYQTAYSELIFLEKLWPEVEREDLVYIIEEYSRRQRRFG 237
>gi|283954395|ref|ZP_06371915.1| undecaprenyl diphosphate synthase [Campylobacter jejuni subsp.
jejuni 414]
gi|283794012|gb|EFC32761.1| undecaprenyl diphosphate synthase [Campylobacter jejuni subsp.
jejuni 414]
Length = 222
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 126/225 (56%), Gaps = 9/225 (4%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ ++MDGN RWA A+G G+ +G++ +++ E I NL++FAFS NW+RP
Sbjct: 6 HLAVVMDGNRRWAKAKGFLAKLGYSQGVKTMQKLMEVCMEENISNLSLFAFSTENWKRPK 65
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
EI + +L+ L + +KNN+ +R IG+ L+D + + E++T+ GL +
Sbjct: 66 DEIEFIFELLDRCLDEALEKFEKNNVSLRAIGDLSRLEDKLKEKIILVEEKTKHCNGLCV 125
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A +Y +RDEI RA K + + +++ + + LD S D DLI+R G K
Sbjct: 126 NLAISYGARDEIIRAAKRVIEK-------KLELNEENLTQNLDLS--LDVDLILRVGNAK 176
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RLS+FLLWQ +Y+E F +P ++ F + ++ R+R FG
Sbjct: 177 RLSNFLLWQCSYAEIYFSETLFPSLTKREFKRIIKEFRNRERTFG 221
>gi|227497806|ref|ZP_03927991.1| undecaprenyl pyrophosphate synthetase [Actinomyces urogenitalis DSM
15434]
gi|226832766|gb|EEH65149.1| undecaprenyl pyrophosphate synthetase [Actinomyces urogenitalis DSM
15434]
Length = 261
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 129/249 (51%), Gaps = 15/249 (6%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ A + P H+G+I+DGN RWA G GH++G + E + A + G++ +T+
Sbjct: 15 LAAQVDPQQVPGHVGVILDGNRRWAKQMGFVTSQGHKRGADKIEEFLGWAEDAGVRVVTL 74
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N R +E+S L+ +I ++ +R++G L D + L++A
Sbjct: 75 WLLSTDNLSRDPAELSPLLDIIAQAVES---LAAAQRWSLRLVGAVDLLPDPLAERLRQA 131
Query: 121 EDQTRLNTG--------LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL--- 169
T G + + IA Y R EI+ A++++ ++ + +V SL
Sbjct: 132 VASTHAAGGEADPGDGRVQVNIAVGYGGRQEIADAVRDLLRERAAAGATLEEVADSLSEE 191
Query: 170 -IAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQ 228
I ++L T PDPDL+IRT GE+RLS FLLWQ +SE+ F YWPDF R F AL
Sbjct: 192 DITEHLYTKGQPDPDLVIRTSGEQRLSGFLLWQSVHSEYYFCEVYWPDFRRIDFLRALRD 251
Query: 229 YNLRDRRFG 237
Y+ R+RR G
Sbjct: 252 YSRRERRLG 260
>gi|326381834|ref|ZP_08203527.1| undecaprenyl diphosphate synthase [Gordonia neofelifaecis NRRL
B-59395]
gi|326199260|gb|EGD56441.1| undecaprenyl diphosphate synthase [Gordonia neofelifaecis NRRL
B-59395]
Length = 260
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 7/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLT 59
+V M P H+ II DGN RWA G + GHR G + +++ +E+GI+ +T
Sbjct: 20 LVQLMDPERIPRHVAIICDGNRRWAREAGFEDVSHGHRVGAQRIADMLGWCSELGIEAVT 79
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
I+ S N R E+ L++++ + + S + +VR++GN L + L+E
Sbjct: 80 IYLLSTENLTRESDELDALMEIVPDIVDE--ISDVDADWRVRIVGNLDQLPAPVAQRLRE 137
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDS---SLIAKYLD 175
A +T + + +A Y R EI A++ + + +E+G+ V + I +L
Sbjct: 138 ASSRTEGAADMTVNVAVGYGGRQEIVDAVQQLLVEAVEAGASREEMVRAISVEGIDSHLY 197
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
TS PDPDL+IRT GE+RLS FLLWQ AYSE F YWP+F R F AL + R+RR
Sbjct: 198 TSGTPDPDLVIRTSGEQRLSGFLLWQSAYSEIWFTDAYWPEFRRVDFLRALRDFAARNRR 257
Query: 236 FG 237
FG
Sbjct: 258 FG 259
>gi|322789612|gb|EFZ14832.1| hypothetical protein SINV_06894 [Solenopsis invicta]
Length = 286
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/219 (36%), Positives = 124/219 (56%), Gaps = 6/219 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGN R+A + +PR GH KG + ++ ++GI +T++ FSINN++R
Sbjct: 26 PRHVAIIMDGNRRYATKQNIPRKEGHTKGFNNLLKTISLCKDLGIVEITVYIFSINNFKR 85
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ +++ +IK F + L + +RVIGN L +DIL + A ++ N L
Sbjct: 86 TKEEVDDIMNIIKCFFEHT-DKLADAGVCIRVIGNLSFLREDILKSIARAIITSKDNNKL 144
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y+SRDE++ AIK I + D+ +LI+ L T +PDL+IRT G
Sbjct: 145 ILNLACSYTSRDELTYAIKEITMGKMHNDILLEDITKNLISDCLYTYKSSNPDLLIRTSG 204
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFS-----RELFFH 224
RLSDFL+WQV+ + F WP+F R +F++
Sbjct: 205 VFRLSDFLMWQVSTTCLYFTETLWPEFDLWDLLRAIFYY 243
>gi|317508404|ref|ZP_07966074.1| di-trans,poly-cis-decaprenylcistransferase [Segniliparus rugosus
ATCC BAA-974]
gi|316253251|gb|EFV12651.1| di-trans,poly-cis-decaprenylcistransferase [Segniliparus rugosus
ATCC BAA-974]
Length = 264
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 125/232 (53%), Gaps = 7/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P+HI ++ DGN RWA A G + GHR G E ++ GI ++T++ S N R
Sbjct: 34 PEHIAVLCDGNRRWARANGFSDVSHGHRVGALKIAEFLSWCDAEGIGHVTVWLLSTENLR 93
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+S L+ +I + + N +VR++G L ++ L + +T TG
Sbjct: 94 RDPEELSALLDIIHEVVAE--LCAPDKNWQVRIVGALEFLPEEFAANLVSSAKKTVGRTG 151
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQD-IESGSVCSHDVDS---SLIAKYLDTSDVPDPDLI 185
++ +A Y R EIS A++++ D + SG VDS + I ++L TS PDPDL+
Sbjct: 152 GHVNVAVGYGGRQEISDAVRSLVADRLASGLAGQELVDSIDVAAIGEHLYTSGQPDPDLV 211
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRT GE+RLS FLLWQ +SE F +WP+F R F A+ Y R RRFG
Sbjct: 212 IRTSGEQRLSGFLLWQSVHSEIWFTEAFWPEFRRVDFLRAMRDYAARHRRFG 263
>gi|296394377|ref|YP_003659261.1| undecaprenyl diphosphate synthase [Segniliparus rotundus DSM 44985]
gi|296181524|gb|ADG98430.1| undecaprenyl diphosphate synthase [Segniliparus rotundus DSM 44985]
Length = 264
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 124/232 (53%), Gaps = 7/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI ++ DGN RWA A G + GHR G E ++ G+ ++T++ S N R
Sbjct: 34 PQHIAVLCDGNRRWARANGFADVSHGHRVGALKIAEFLSWCDAEGVGHVTVWLLSTENLR 93
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E++ L+ +I + + N +VR++G L ++ L + QT TG
Sbjct: 94 RDPEELAALLDVIHEVVAE--LCAPDKNWQVRIVGALEFLPEEFATNLLRSAKQTVGRTG 151
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSDVPDPDLI 185
++ +A Y R EIS A++++ + S + ++ +D + I ++L TS PDPDL+
Sbjct: 152 NHVNVAVGYGGRQEISDAVRSLVAEKLSAGLTGNELVQSIDVAGIGEHLYTSGQPDPDLV 211
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRT GE+RLS FLLWQ +SE F YWP+F R F AL Y R RRFG
Sbjct: 212 IRTSGEQRLSGFLLWQSVHSEIWFTEAYWPEFRRVDFLRALRDYAARHRRFG 263
>gi|227501561|ref|ZP_03931610.1| undecaprenyl pyrophosphate synthetase [Corynebacterium accolens
ATCC 49725]
gi|227077586|gb|EEI15549.1| undecaprenyl pyrophosphate synthetase [Corynebacterium accolens
ATCC 49725]
Length = 249
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 126/232 (54%), Gaps = 7/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ I+ DGN RWA G + GHR+G + E++A + I+ +TI+ S N +
Sbjct: 19 PKHVAIMADGNRRWAREAGFTDISHGHRQGAKKIGEMIAWCRDTDIEVVTIYLLSTENLK 78
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ L +I + S + +VR++GN L + + +A ++T+ N G
Sbjct: 79 RSQQEVQLLFDIISDVVT--HLSRGDLDCQVRLVGNLDLLPAPVTQRMVDAAEETKDNQG 136
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQ-DIESGSVCSH---DVDSSLIAKYLDTSDVPDPDLI 185
+ + +A Y R EI A++ + + + E G+ + V + I ++L T +PDPDL+
Sbjct: 137 VIVNVAVGYGGRQEIVDAVQKLVRSEAEKGTSAAEMAERVTADSITEHLYTKGLPDPDLV 196
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRT GE+RLS FLLWQ AYSE F YWP F + F AL Y+ R RRFG
Sbjct: 197 IRTSGEQRLSGFLLWQAAYSEIWFTDTYWPAFRKVDFLRALRDYSQRSRRFG 248
>gi|326936335|ref|XP_003214211.1| PREDICTED: dehydrodolichyl diphosphate synthase-like [Meleagris
gallopavo]
Length = 333
Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 130/221 (58%), Gaps = 4/221 (1%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A+++ + P P H+ IMDGN R+A + R GH +G + + + +GI+ +T+
Sbjct: 16 CANIIKAGPMPKHVAFIMDGNRRYAQKCHVERQQGHSQGFDKLAQTLRWCLNLGIREVTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+ L + S L + +LKK+ + +RV+G+ L DI ++
Sbjct: 76 YAFSIENFKRSKEEVDGLMDLARQKFSRLLEERENLKKHGVCIRVLGDLPLLPLDIQELI 135
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+A TR L + F Y+SR EIS A++ + +E G + DV SL+ K L TS
Sbjct: 136 AQAVMATRNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLEPSDVSESLLDKCLYTS 195
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS 218
+ PDPDL+IRT GE RLSDFLLWQ ++S VF WP++S
Sbjct: 196 NSPDPDLLIRTSGEVRLSDFLLWQTSHSCLVFQSVLWPEYS 236
>gi|306835719|ref|ZP_07468725.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
accolens ATCC 49726]
gi|304568437|gb|EFM43996.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
accolens ATCC 49726]
Length = 256
Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 126/232 (54%), Gaps = 7/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ I+ DGN RWA G + GHR+G + E++A + I+ +TI+ S N +
Sbjct: 26 PKHVAIMADGNRRWAREAGFTDISHGHRQGAKKIGEMIAWCRDTDIEVVTIYLLSTENLK 85
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ L +I + S + +VR++GN L + + +A ++T+ N G
Sbjct: 86 RSQQEVQLLFDIISDVVT--HLSRGDLDCQVRLVGNLDLLPAPVTQRMVDAAEETKDNQG 143
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQ-DIESGSVCSH---DVDSSLIAKYLDTSDVPDPDLI 185
+ + +A Y R EI A++ + + + E G+ + V + I ++L T +PDPDL+
Sbjct: 144 VIVNVAVGYGGRQEIVDAVQKLVRSEAEKGTSAAEMAERVTADSITEHLYTKGLPDPDLV 203
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRT GE+RLS FLLWQ AYSE F YWP F + F AL Y+ R RRFG
Sbjct: 204 IRTSGEQRLSGFLLWQAAYSEIWFTDTYWPAFRKVDFLRALRDYSQRSRRFG 255
>gi|317124136|ref|YP_004098248.1| undecaprenyl pyrophosphate synthetase [Intrasporangium calvum DSM
43043]
gi|315588224|gb|ADU47521.1| Undecaprenyl pyrophosphate synthetase [Intrasporangium calvum DSM
43043]
Length = 253
Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 125/233 (53%), Gaps = 7/233 (3%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P H+ +++DGN RWA ARG GH+ G + E++ E G++ +T++ S +N
Sbjct: 23 SLPRHVAVMLDGNRRWARARGAGTAHGHQAGADKIEELLQWCEEAGVEYVTLWLLSTDNL 82
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+R +E++ L+K+I++ + ++R+ G L D L+ + T +
Sbjct: 83 QRAEAELAPLLKIIENAVAD---LAATGRWRLRIAGAVDLLPPDTAESLQRSVAATEAVS 139
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDVPDPDL 184
G+ + +A Y R EI+ A++++ + + D+ + L IA++L T PDPDL
Sbjct: 140 GMTVNVAVAYGGRREIADAVRDMLLEHSARGESIEDIAARLRIEDIAEHLYTKGQPDPDL 199
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+IRT GE+RL FLLWQ A SEF F YWPDF F AL Y R RR G
Sbjct: 200 VIRTSGEQRLGGFLLWQSATSEFYFCEAYWPDFRHVDFLRALRAYAGRHRRHG 252
>gi|148698094|gb|EDL30041.1| dehydrodolichyl diphosphate synthase, isoform CRA_b [Mus musculus]
Length = 355
Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/246 (34%), Positives = 134/246 (54%), Gaps = 7/246 (2%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A+++ + P P HI IMDGN R+A + R GH +G E + +GI +T+
Sbjct: 37 CANIIKAGPVPKHIAFIMDGNRRYAKKCQVERQEGHTQGFNKLAETLRWCLNLGILEVTV 96
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R SE+ L+ L + S L + L+K+ + +RV+G+ L D+ +
Sbjct: 97 YAFSIENFKRSKSEVDGLLDLARQKFSCLMEEQEKLQKHGVCIRVLGDLHLLPLDLQEKI 156
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
A T+ L + F Y+SR EI+ A++ + +E G + DV SL+ K L ++
Sbjct: 157 AHAIQATKNYNKCFLNVCFAYTSRHEIANAVREMAWGVEQGLLEPSDVSESLLDKCLYSN 216
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
P PD++IRT GE RLSDFLLWQ ++S VF P WP+++ A+ Q+ R G
Sbjct: 217 HSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLCEAILQFQ---RNHG 273
Query: 238 GLSKKG 243
L +K
Sbjct: 274 ALQQKA 279
>gi|21226720|ref|NP_632642.1| undecaprenyl pyrophosphate synthetase [Methanosarcina mazei Go1]
gi|20905008|gb|AAM30314.1| Undecaprenyl pyrophosphate synthetase [Methanosarcina mazei Go1]
Length = 324
Score = 145 bits (366), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/237 (36%), Positives = 134/237 (56%), Gaps = 11/237 (4%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
++SS P+HI +IMDGN R+A G R GH G EV +++ E+G+K LT++AFS
Sbjct: 47 ILSSEIPEHIAVIMDGNRRYAGQLGKARIFGHAMGAEVTEQVIEWCYEIGVKQLTLYAFS 106
Query: 65 INNWRRPVSEISELVKLI-KSFLKKGFYSLKKN---NIKVRVIGNRLSLDDDILCVLKEA 120
N++R E+ L LI + FLK ++ K+ ++VRVIG+R L + +
Sbjct: 107 TENFQRSEEEVGGLFNLINEKFLK--LHTDKRTYEKEMQVRVIGDRTKLPAYLNESIDRI 164
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS--- 177
E T + +L +A Y R +I +A+++I + SG + DV+ SLI+K+L +
Sbjct: 165 EKATEHHRKFSLNVAIAYGGRQDIMQAVRDIATCVSSGKLSLEDVNESLISKHLYPAPGV 224
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFV--FIPEYWPDFSRELFFHALNQYNLR 232
VP+ DLIIRTGG++R+S+FL WQ SE F +WP+F + ++ Y R
Sbjct: 225 PVPNVDLIIRTGGDERISNFLPWQANGSECATYFCAPFWPEFRKIDLLRSVRVYQAR 281
>gi|26329837|dbj|BAC28657.1| unnamed protein product [Mus musculus]
gi|126540561|emb|CAM46106.1| dehydrodolichyl diphosphate synthase [Mus musculus]
gi|126541193|emb|CAM46083.1| dehydrodolichyl diphosphate synthase [Mus musculus]
Length = 334
Score = 145 bits (366), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/246 (34%), Positives = 134/246 (54%), Gaps = 7/246 (2%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A+++ + P P HI IMDGN R+A + R GH +G E + +GI +T+
Sbjct: 16 CANIIKAGPVPKHIAFIMDGNRRYAKKCQVERQEGHTQGFNKLAETLRWCLNLGILEVTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R SE+ L+ L + S L + L+K+ + +RV+G+ L D+ +
Sbjct: 76 YAFSIENFKRSKSEVDGLLDLARQKFSCLMEEQEKLQKHGVCIRVLGDLHLLPLDLQEKI 135
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
A T+ L + F Y+SR EI+ A++ + +E G + DV SL+ K L ++
Sbjct: 136 AHAIQATKNYNKCFLNVCFAYTSRHEIANAVREMAWGVEQGLLEPSDVSESLLDKCLYSN 195
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
P PD++IRT GE RLSDFLLWQ ++S VF P WP+++ A+ Q+ R G
Sbjct: 196 HSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLCEAILQFQ---RNHG 252
Query: 238 GLSKKG 243
L +K
Sbjct: 253 ALQQKA 258
>gi|300789889|ref|YP_003770180.1| undecaprenyl pyrophosphate synthetase [Amycolatopsis mediterranei
U32]
gi|299799403|gb|ADJ49778.1| undecaprenyl pyrophosphate synthetase [Amycolatopsis mediterranei
U32]
Length = 252
Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 124/232 (53%), Gaps = 7/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI I++DGN RWA G + GHR G + + ++ E ++ +T++ S +N
Sbjct: 22 PRHIAIMLDGNRRWAREAGFTDVSDGHRAGAKKIADFLSWCQEADVEVVTMWLLSTDNLN 81
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E++ L+K+I + + ++R++G L ++ L EA +T TG
Sbjct: 82 RDPDELTPLLKIITDVTDE--LAGPGTAWQLRIVGALDLLPAEVAKRLSEAAARTEGRTG 139
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLDTSDVPDPDLI 185
+ + IA Y R EI+ A++ + + H++ D I+++L TS PDPDLI
Sbjct: 140 MEVNIAVGYGGRQEIADAVRKLLRQHADEGTSIHELAKILDVDHISEHLYTSGQPDPDLI 199
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRT GE+RLS FLLWQ A+SEF F YWP F R F A+ Y R RRFG
Sbjct: 200 IRTSGEQRLSGFLLWQSAHSEFWFTEAYWPAFRRVDFLRAIRDYAWRHRRFG 251
>gi|257057126|ref|YP_003134958.1| Undecaprenyl pyrophosphate synthetase [Saccharomonospora viridis
DSM 43017]
gi|256586998|gb|ACU98131.1| Undecaprenyl pyrophosphate synthetase [Saccharomonospora viridis
DSM 43017]
Length = 259
Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 86/234 (36%), Positives = 126/234 (53%), Gaps = 8/234 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HIGII+DGN RWA G GHR G + + E ++ +T++ S +N R
Sbjct: 28 PRHIGIILDGNRRWAREAGFTDVNGGHRVGARKIADFLGWCREAKVEVVTLWLLSTDNVR 87
Query: 70 -RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
R E++ L+++I + + + N ++ ++G L D+ L A +T
Sbjct: 88 NRSSEEVAALLEIIPDVVDE--LAKPGNPWRLSIVGALDMLPTDVAARLTAAAQRTDGRN 145
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQD-IESGSV---CSHDVDSSLIAKYLDTSDVPDPDL 184
G+ + +A Y R EI+ A++ + Q E G+ + +D IA++L TS PDPDL
Sbjct: 146 GMIVNVAVGYGGRQEIADAVRKLLQQHAEEGTSIQQLAETLDVDHIAEHLYTSGQPDPDL 205
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
IIRT GE+RLS FLLWQ A+SEF F YWP F + F AL Y +R RR+GG
Sbjct: 206 IIRTSGEQRLSGFLLWQSAHSEFWFTEAYWPAFRKVDFLRALRDYAVRHRRYGG 259
>gi|84489974|ref|YP_448206.1| hypothetical protein Msp_1182 [Methanosphaera stadtmanae DSM 3091]
gi|84373293|gb|ABC57563.1| UppS [Methanosphaera stadtmanae DSM 3091]
Length = 255
Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 126/230 (54%), Gaps = 3/230 (1%)
Query: 11 PDHIGIIMDGNGRWAAARG-LPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P+H+ IIMDGN R++ +G + GH+KG++ ++ ++GI +T++AFS N+
Sbjct: 25 PNHVAIIMDGNRRYSKIQGNMDPIEGHKKGVDTLENVIEWCIDLGINIVTVYAFSTENFN 84
Query: 70 RPVSEISELVKL-IKSFLK-KGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
R E+ L+ L ++SFL + KN I++ +G + + AE+ T+
Sbjct: 85 RDKKEVEGLMDLFVQSFLNISTNKKIHKNKIRLNAVGKLELFPKKVRDAIDTAEESTKDY 144
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+ IA Y R EI A K I ++++ G++ +++ +I L T+ + DP+L+IR
Sbjct: 145 NERMINIAMGYDGRVEIVDAFKKIAREVQKGNIEPDEINEKMINDNLYTAGLEDPNLVIR 204
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
T GE+RLS FLLWQ +YSE F WP + F A+ Y R RRFG
Sbjct: 205 TSGEERLSGFLLWQSSYSELYFTDSLWPQLRKVDFLRAIRSYTQRQRRFG 254
>gi|257069432|ref|YP_003155687.1| Undecaprenyl pyrophosphate synthetase [Brachybacterium faecium DSM
4810]
gi|256560250|gb|ACU86097.1| Undecaprenyl pyrophosphate synthetase [Brachybacterium faecium DSM
4810]
Length = 252
Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 126/231 (54%), Gaps = 8/231 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+G+I+DGN RWA G GHR G E ++ ++ I +T++ S +N RR
Sbjct: 25 PQHLGVIVDGNRRWAKEAGETTEHGHRVGAAKILEFLSWCDDLDIPLVTVWMLSTDNLRR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L ++I + + + + VR+ GN +L ++ + ++QT + L
Sbjct: 85 PPEELTALYEIIGATIGR----IIDAGYCVRLTGNAEALPQEMRADISREQEQTAPESRL 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDVPDPDLII 186
+ +A Y R+EI A++ + +D+ + + + + + IA++L T PDPDLII
Sbjct: 141 TVNVAIGYGGREEIVDAVQELVRDLAAQGLDGDGIAAGISIGSIAEHLYTRGQPDPDLII 200
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE+RLS FLLWQ +SE+ F YWP F R AL + R+RRFG
Sbjct: 201 RTSGEQRLSGFLLWQSVHSEYWFCETYWPGFRRVDLLRALRDFCRRERRFG 251
>gi|42559834|sp|Q8PZ76|UPPS_METMA RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
Length = 298
Score = 145 bits (365), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 86/237 (36%), Positives = 134/237 (56%), Gaps = 11/237 (4%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
++SS P+HI +IMDGN R+A G R GH G EV +++ E+G+K LT++AFS
Sbjct: 21 ILSSEIPEHIAVIMDGNRRYAGQLGKARIFGHAMGAEVTEQVIEWCYEIGVKQLTLYAFS 80
Query: 65 INNWRRPVSEISELVKLI-KSFLKKGFYSLKKN---NIKVRVIGNRLSLDDDILCVLKEA 120
N++R E+ L LI + FLK ++ K+ ++VRVIG+R L + +
Sbjct: 81 TENFQRSEEEVGGLFNLINEKFLK--LHTDKRTYEKEMQVRVIGDRTKLPAYLNESIDRI 138
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS--- 177
E T + +L +A Y R +I +A+++I + SG + DV+ SLI+K+L +
Sbjct: 139 EKATEHHRKFSLNVAIAYGGRQDIMQAVRDIATCVSSGKLSLEDVNESLISKHLYPAPGV 198
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFV--FIPEYWPDFSRELFFHALNQYNLR 232
VP+ DLIIRTGG++R+S+FL WQ SE F +WP+F + ++ Y R
Sbjct: 199 PVPNVDLIIRTGGDERISNFLPWQANGSECATYFCAPFWPEFRKIDLLRSVRVYQAR 255
>gi|118101494|ref|XP_417694.2| PREDICTED: similar to Dehydrodolichyl diphosphate synthase [Gallus
gallus]
Length = 333
Score = 145 bits (365), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 84/221 (38%), Positives = 130/221 (58%), Gaps = 4/221 (1%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A+++ + P P H+ IMDGN R+A + R GH +G + + + +GI+ +T+
Sbjct: 16 CANIIKAGPMPKHVAFIMDGNRRYAQKCHVERQQGHSQGFDKLAQTLRWCLNLGIREVTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+ L + S L + +LKK+ + +RV+G+ L D+ ++
Sbjct: 76 YAFSIENFKRSKEEVDGLMDLARQKFSRLLEEQENLKKHGVCIRVLGDLPLLPLDVQELI 135
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+A TR L + F Y+SR EIS A++ + +E G + DV SL+ K L TS
Sbjct: 136 AQAVMATRNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLEPSDVSESLLDKCLYTS 195
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS 218
+ PDPDL+IRT GE RLSDFLLWQ ++S VF WP++S
Sbjct: 196 NSPDPDLLIRTSGEVRLSDFLLWQTSHSCLVFQSVLWPEYS 236
>gi|307595062|ref|YP_003901379.1| undecaprenyl diphosphate synthase [Vulcanisaeta distributa DSM
14429]
gi|307550263|gb|ADN50328.1| undecaprenyl diphosphate synthase [Vulcanisaeta distributa DSM
14429]
Length = 238
Score = 145 bits (365), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 91/237 (38%), Positives = 133/237 (56%), Gaps = 5/237 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M + P HIG+I DGN RWA GLP +R G + E + + + GIK +T++ S
Sbjct: 1 MQGALPIHIGVIPDGNRRWARKVGLPITEAYRIGSDKVEEFLDWSLDFGIKIVTVYVLST 60
Query: 66 NNW-RRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
N+ RR E+ L +L+K L K + +N ++VRVIG L +D+ + E+
Sbjct: 61 ENFLRRSKLELDLLYRLLKEKLIKVRKDERIHRNRVRVRVIGRTWLLPEDVRREIALTEE 120
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD--VP 180
T + L +A Y R EI AIK I D SG + D++ + +YL D P
Sbjct: 121 ATANYSDHYLNLAVVYGGRQEIIDAIKKILVDYNSGKLNISDLNEDTLFRYLYIGDEPYP 180
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+PDLIIRTGGE R+S+FLL++ AYSE + +YWP+ ++E AL+ Y+ R+RRFG
Sbjct: 181 EPDLIIRTGGEHRISNFLLYETAYSELYILNKYWPEITKEDLKQALDDYSRRERRFG 237
>gi|325962612|ref|YP_004240518.1| undecaprenyl pyrophosphate synthetase [Arthrobacter
phenanthrenivorans Sphe3]
gi|323468699|gb|ADX72384.1| Undecaprenyl pyrophosphate synthetase [Arthrobacter
phenanthrenivorans Sphe3]
Length = 257
Score = 145 bits (365), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 127/242 (52%), Gaps = 7/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + S P HIG+++DGN RWA P GH+ G + +E + E+G+K +T+
Sbjct: 19 LLKDLARDSIPQHIGVMVDGNRRWAKQFNAPTSQGHQAGADKIHEFLGWCQELGVKVVTL 78
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N R E+ L+ +I + L + + NI V +G L D + L +
Sbjct: 79 YMLSTDNMNRSSEELDLLMGIIANTLDR---LDEDENISVHAMGAPELLPDYLADRLNKL 135
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD-IESG---SVCSHDVDSSLIAKYLDT 176
+T + +++ +A Y R EI A++ + D + G S + ++ I+++L T
Sbjct: 136 TARTPVTENIHVNVAVGYGGRREIVDAVRELLHDAVARGADISALADELTVDDISRFLYT 195
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
PDPDL+IRT GE+RLS FL+WQ AYSEF F WP F + F AL Y R RRF
Sbjct: 196 RGQPDPDLVIRTSGEQRLSGFLMWQSAYSEFYFCEALWPAFRKVDFLRALRDYAGRQRRF 255
Query: 237 GG 238
G
Sbjct: 256 GA 257
>gi|166157941|ref|NP_001107380.1| dehydrodolichyl diphosphate synthase [Xenopus (Silurana)
tropicalis]
gi|163915444|gb|AAI57267.1| LOC100135207 protein [Xenopus (Silurana) tropicalis]
gi|213624533|gb|AAI71230.1| hypothetical protein LOC100135207 [Xenopus (Silurana) tropicalis]
gi|213627802|gb|AAI71232.1| hypothetical protein LOC100135207 [Xenopus (Silurana) tropicalis]
Length = 332
Score = 145 bits (365), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 127/222 (57%), Gaps = 4/222 (1%)
Query: 1 MVASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ A+++ + P P H+ IMDGN R+A + R GH +G E E + +GI +T
Sbjct: 15 LCANVLKAGPIPKHVAFIMDGNRRYAKKCHVERQEGHSQGFEKLAETLRWCLNLGICEVT 74
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCV 116
++AFSI N++R E+ L++L + + LKK+ + +RV+G+ L DI +
Sbjct: 75 VYAFSIENFKRSAEEVEGLMELARQKFARLLEEKDKLKKHGVCIRVLGDMTLLPLDIQKL 134
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT 176
+ +A +T+ + L + F Y+SR EIS AI+ ++ G + DV SL+ + L T
Sbjct: 135 IAQAVLETKDYSTCFLNVCFAYTSRHEISNAIREAAWGVQEGLLDPRDVSESLLDQCLYT 194
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS 218
+ +PDL+IRT GE RLSDFLLWQ ++S VF WP+++
Sbjct: 195 AKSLEPDLLIRTSGEVRLSDFLLWQTSHSCLVFQSVLWPEYT 236
>gi|119962556|ref|YP_947074.1| undecaprenyl diphosphate synthase [Arthrobacter aurescens TC1]
gi|119949415|gb|ABM08326.1| undecaprenyl diphosphate synthase [Arthrobacter aurescens TC1]
Length = 268
Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 127/241 (52%), Gaps = 7/241 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ S+ P HIG+++DGN RWA P GH+ G + +E + E+G+K +T+
Sbjct: 30 LLRSLKQDRIPRHIGVMVDGNRRWARQFNAPTSQGHQAGADKIHEFLGWCQELGVKVVTL 89
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N R E+ L+ +I + + + + ++ V +G L D + L +
Sbjct: 90 YMLSTDNMSRSGEELDLLMGIIANTMDR---LDEDEDVSVHAMGAPELLPDYLAERLNKL 146
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDT 176
+T ++ +++ +A Y R EI A++ + D ++ DV L I+K+L T
Sbjct: 147 TARTPVHEKIHVNVAVGYGGRREIVDAVRELLHDADAKGRKMSDVADELSVDDISKFLYT 206
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
PDPDL+IRT GE+RLS FL+WQ AYSEF F WP F + F AL Y R RRF
Sbjct: 207 RGQPDPDLVIRTSGEQRLSGFLMWQSAYSEFYFCEALWPAFRKVDFLRALRDYAGRQRRF 266
Query: 237 G 237
G
Sbjct: 267 G 267
>gi|148698093|gb|EDL30040.1| dehydrodolichyl diphosphate synthase, isoform CRA_a [Mus musculus]
Length = 336
Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 133/244 (54%), Gaps = 7/244 (2%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A+++ + P P HI IMDGN R+A + R GH +G E + +GI +T+
Sbjct: 19 CANIIKAGPVPKHIAFIMDGNRRYAKKCQVERQEGHTQGFNKLAETLRWCLNLGILEVTV 78
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R SE+ L+ L + S L + L+K+ + +RV+G+ L D+ +
Sbjct: 79 YAFSIENFKRSKSEVDGLLDLARQKFSCLMEEQEKLQKHGVCIRVLGDLHLLPLDLQEKI 138
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
A T+ L + F Y+SR EI+ A++ + +E G + DV SL+ K L ++
Sbjct: 139 AHAIQATKNYNKCFLNVCFAYTSRHEIANAVREMAWGVEQGLLEPSDVSESLLDKCLYSN 198
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
P PD++IRT GE RLSDFLLWQ ++S VF P WP+++ A+ Q+ R G
Sbjct: 199 HSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLCEAILQFQ---RNHG 255
Query: 238 GLSK 241
L K
Sbjct: 256 ALQK 259
>gi|126540560|emb|CAM46105.1| dehydrodolichyl diphosphate synthase [Mus musculus]
gi|126541192|emb|CAM46082.1| dehydrodolichyl diphosphate synthase [Mus musculus]
Length = 258
Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 133/244 (54%), Gaps = 7/244 (2%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A+++ + P P HI IMDGN R+A + R GH +G E + +GI +T+
Sbjct: 16 CANIIKAGPVPKHIAFIMDGNRRYAKKCQVERQEGHTQGFNKLAETLRWCLNLGILEVTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R SE+ L+ L + S L + L+K+ + +RV+G+ L D+ +
Sbjct: 76 YAFSIENFKRSKSEVDGLLDLARQKFSCLMEEQEKLQKHGVCIRVLGDLHLLPLDLQEKI 135
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
A T+ L + F Y+SR EI+ A++ + +E G + DV SL+ K L ++
Sbjct: 136 AHAIQATKNYNKCFLNVCFAYTSRHEIANAVREMAWGVEQGLLEPSDVSESLLDKCLYSN 195
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
P PD++IRT GE RLSDFLLWQ ++S VF P WP+++ A+ Q+ R G
Sbjct: 196 HSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLCEAILQFQ---RNHG 252
Query: 238 GLSK 241
L K
Sbjct: 253 ALQK 256
>gi|27754093|ref|NP_080420.2| dehydrodolichyl diphosphate synthase [Mus musculus]
gi|46395956|sp|Q99KU1|DHDDS_MOUSE RecName: Full=Dehydrodolichyl diphosphate synthase; Short=Dedol-PP
synthase
gi|13278394|gb|AAH04011.1| Dhdds protein [Mus musculus]
gi|26340716|dbj|BAC34020.1| unnamed protein product [Mus musculus]
gi|74149270|dbj|BAE22416.1| unnamed protein product [Mus musculus]
gi|74222941|dbj|BAE42313.1| unnamed protein product [Mus musculus]
gi|74225950|dbj|BAE28748.1| unnamed protein product [Mus musculus]
gi|126540558|emb|CAM46103.1| dehydrodolichyl diphosphate synthase [Mus musculus]
gi|126541190|emb|CAM46080.1| dehydrodolichyl diphosphate synthase [Mus musculus]
gi|148698095|gb|EDL30042.1| dehydrodolichyl diphosphate synthase, isoform CRA_c [Mus musculus]
Length = 333
Score = 144 bits (364), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 133/244 (54%), Gaps = 7/244 (2%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A+++ + P P HI IMDGN R+A + R GH +G E + +GI +T+
Sbjct: 16 CANIIKAGPVPKHIAFIMDGNRRYAKKCQVERQEGHTQGFNKLAETLRWCLNLGILEVTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R SE+ L+ L + S L + L+K+ + +RV+G+ L D+ +
Sbjct: 76 YAFSIENFKRSKSEVDGLLDLARQKFSCLMEEQEKLQKHGVCIRVLGDLHLLPLDLQEKI 135
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
A T+ L + F Y+SR EI+ A++ + +E G + DV SL+ K L ++
Sbjct: 136 AHAIQATKNYNKCFLNVCFAYTSRHEIANAVREMAWGVEQGLLEPSDVSESLLDKCLYSN 195
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
P PD++IRT GE RLSDFLLWQ ++S VF P WP+++ A+ Q+ R G
Sbjct: 196 HSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLCEAILQFQ---RNHG 252
Query: 238 GLSK 241
L K
Sbjct: 253 ALQK 256
>gi|126459770|ref|YP_001056048.1| undecaprenyl pyrophosphate synthetase [Pyrobaculum calidifontis JCM
11548]
gi|126249491|gb|ABO08582.1| Undecaprenyl pyrophosphate synthetase [Pyrobaculum calidifontis JCM
11548]
Length = 234
Score = 144 bits (364), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 86/237 (36%), Positives = 130/237 (54%), Gaps = 9/237 (3%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEV-GIKNLTIFAFS 64
M P HI +I DGN R+A GL +++G+E + A E IKN+T FA S
Sbjct: 1 MYVKIPTHIAVIPDGNRRYAKKVGLDFYHAYKRGVEKVRSFLLWALEYREIKNVTFFALS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
N +R E+ L ++ + L+K + +N ++VR IG+ L ++ +E E
Sbjct: 61 TENLQRSRLELEILFRIFEEELRKTLEDPLIHENRVRVRFIGDMSLLPSRVVKWAEELEA 120
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP-- 180
T+ +L +A Y R EI R +K + SG V +V + + LDT D+P
Sbjct: 121 ATKNYGNYHLTLALGYGGRAEIVRCVKRLL----SGEVKLAEVTEESLFQCLDTRDLPNP 176
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+PD+++RTGGEKRLS+FLL+Q AYSE VF+ + WP+ RE + + +Y+ R RRFG
Sbjct: 177 EPDVVVRTGGEKRLSNFLLYQTAYSELVFLDKLWPEVEREDLAYIVEEYSRRQRRFG 233
>gi|115627881|ref|XP_796039.2| PREDICTED: similar to dehydrodolichyl diphosphate synthase
[Strongylocentrotus purpuratus]
gi|115929439|ref|XP_001194130.1| PREDICTED: similar to dehydrodolichyl diphosphate synthase
[Strongylocentrotus purpuratus]
Length = 334
Score = 144 bits (364), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 82/225 (36%), Positives = 124/225 (55%), Gaps = 3/225 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IMDGN R+A + + GH G E E + ++GI +T++AFSI N++R
Sbjct: 49 PQHVAFIMDGNRRFAKKKSVQTLEGHSLGFEKLAETLQWCLDLGITEVTVYAFSIENFKR 108
Query: 71 PVSEISELVKLI-KSFLK--KGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
E+ L++L K FL+ + + K+ + V+VIG+ L D+ V+ EA +R N
Sbjct: 109 SRQEVDGLMELARKKFLRLLEEKDQIMKHGVCVQVIGDLNLLPRDVQEVVAEAMFISRNN 168
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T L + Y+SR E++ A+K + +E G + DV L+ + L T DP+L++R
Sbjct: 169 TRATLNVCLAYTSRQEMANAVKEVALGVEEGILEPSDVSEELLEECLYTHRCKDPELLVR 228
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLR 232
T GE RLSDFLLWQ YS F+ WP+FS F A+ Y +
Sbjct: 229 TSGEVRLSDFLLWQSGYSVLSFVEVLWPEFSIWHLFAAVLHYQTK 273
>gi|1262287|gb|AAA96784.1| ORF1; open reading frame in cdsA 5' region; hypothetical protein
[Brucella abortus]
Length = 153
Score = 144 bits (364), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 67/132 (50%), Positives = 91/132 (68%)
Query: 112 DILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIA 171
+I +L EAE T NTGLNL IAFNY SRDEI RA++++ +D+ +G + + + L++
Sbjct: 4 NIRALLNEAESLTHRNTGLNLVIAFNYGSRDEIVRAVRSLARDVAAGLLDPSSISAELVS 63
Query: 172 KYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
LDT+ +PDPDLIIRT GE RLS+FLLWQ AYSEF+F+P +WPDF A +
Sbjct: 64 ANLDTAGIPDPDLIIRTSGEMRLSNFLLWQAAYSEFLFLPCHWPDFRPADLDAAYETFRQ 123
Query: 232 RDRRFGGLSKKG 243
R+RRFGG+ +
Sbjct: 124 RERRFGGVEPRA 135
>gi|296128803|ref|YP_003636053.1| undecaprenyl diphosphate synthase [Cellulomonas flavigena DSM
20109]
gi|296020618|gb|ADG73854.1| undecaprenyl diphosphate synthase [Cellulomonas flavigena DSM
20109]
Length = 253
Score = 144 bits (364), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 131/241 (54%), Gaps = 7/241 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ S+ P HIG+I+DGN RWA GL GHR+G + ++++ + +VG++ +T+
Sbjct: 15 LAGSLEPDQVPRHIGVILDGNRRWARDSGLSSATGHRRGADKISDLLQWSEDVGVEVVTL 74
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N R E+ +L+ +I+ + + + +++ +G L D LK A
Sbjct: 75 WMLSTDNLARDPEELEQLLGVIEDVVGE---LAAERRWRIQAVGALDMLPDCTAAALKAA 131
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQ-DIESGSVC---SHDVDSSLIAKYLDT 176
+D T GL++ A Y R EI+ A++ + E+GS + D IA++L T
Sbjct: 132 QDATADVQGLHVNAAVGYGGRREIADAVRAFLRMHAEAGSSLDELAEAFDVEHIAEHLYT 191
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
PDPDL+IRT GE+RL FLLWQ +SEF F YWPDF R F A+ Y R+RR
Sbjct: 192 KGQPDPDLVIRTSGEQRLGGFLLWQSTHSEFYFCDAYWPDFRRVDFLRAVRAYGQRERRL 251
Query: 237 G 237
G
Sbjct: 252 G 252
>gi|172040282|ref|YP_001799996.1| hypothetical protein cur_0602 [Corynebacterium urealyticum DSM
7109]
gi|171851586|emb|CAQ04562.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
Length = 271
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 119/232 (51%), Gaps = 7/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI I+ DGN RWA G + GHR G E+ E+GI ++T++ S N +
Sbjct: 41 PAHIAIMADGNRRWARENGFTDVSHGHRVGARKIAEMCNWCDEMGIASVTVYLLSTENLK 100
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ L+K+I + K +VR +G+ L + L+ E T NTG
Sbjct: 101 REPEELELLIKIIGDVADE--LGQAKAGFRVRSVGHLELLPQQLRERLERNEKLTANNTG 158
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDVPDPDLI 185
+ + +A Y R EI A+++ ++ + + + + + ++ T PDPDL+
Sbjct: 159 VCVNVAVGYGGRQEIVDAVRDTVAELAADGTPAEKIAEKITVDSLGNHMYTKGQPDPDLV 218
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRT GE+RLS FLLWQ AYSE F YWP F R F AL +Y+ R RRFG
Sbjct: 219 IRTSGEQRLSGFLLWQSAYSEIWFTDTYWPAFRRVDFLRALREYSQRHRRFG 270
>gi|58865532|ref|NP_001011978.1| dehydrodolichyl diphosphate synthase [Rattus norvegicus]
gi|55250438|gb|AAH85875.1| Dehydrodolichyl diphosphate synthase [Rattus norvegicus]
gi|149024198|gb|EDL80695.1| rCG31494 [Rattus norvegicus]
Length = 333
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 130/234 (55%), Gaps = 4/234 (1%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A+++ P P HI IMDGN R+A + R GH +G E + +GI +T+
Sbjct: 16 CANIIKVGPVPKHIAFIMDGNRRYAKKCQVERQEGHTQGFNKLAETLRWCLNLGILEVTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R SE+ L+ L + S L + LKK+ + +RV+G+ L D+ +
Sbjct: 76 YAFSIENFKRSKSEVDGLLDLARQKFSCLMEEQEKLKKHGVCIRVLGDLHLLPLDLQKKI 135
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+A T+ L + F Y+SR EI+ A++ + +E G + DV SL+ + L ++
Sbjct: 136 AQAVQATKNYNKCFLNVCFAYTSRHEITNAVREMAWGVEQGLLEPSDVSESLLDQCLYSN 195
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
P PD++IRT GE RLSDFLLWQ ++S VF P WP+++ A+ Q+ +
Sbjct: 196 HSPQPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLCEAILQFQM 249
>gi|227494767|ref|ZP_03925083.1| undecaprenyl pyrophosphate synthetase [Actinomyces coleocanis DSM
15436]
gi|226831767|gb|EEH64150.1| undecaprenyl pyrophosphate synthetase [Actinomyces coleocanis DSM
15436]
Length = 263
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 130/242 (53%), Gaps = 19/242 (7%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+G+I+DGN RWA A G GHRKG + E + A E G++ +T++ S +N R
Sbjct: 25 PAHVGVILDGNRRWAKAVGNATSYGHRKGADKITEFLGWAREFGVQVVTLWMLSTDNLSR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKN-NIKVRVIGNRLSLDDDIL----------CVLKE 119
+E++ L+ +I ++ + N +V+V+G+ L + + L +
Sbjct: 85 SEAELAPLLSIIVDATRE----IAANPEYRVQVVGDLNLLPEGVASELSQIVAASAALGD 140
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI-ESGSVCSHDVDSSLI---AKYLD 175
AE + + L + +A Y R EI+ A++++ + E G D I +++L
Sbjct: 141 AEGFYQGSLRLTVNVAIGYGGRHEITDAVRSLLRSYAERGMTLEQAADVLTIDDISEHLY 200
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
T+ VPDPDL+IRT GE+RLS F+LWQ +SEF F +WPDF R F AL Y R+RR
Sbjct: 201 TAGVPDPDLLIRTSGEQRLSGFMLWQSVHSEFYFCEAFWPDFRRVDFLRALRDYGQRERR 260
Query: 236 FG 237
G
Sbjct: 261 LG 262
>gi|70606556|ref|YP_255426.1| undecaprenyl pyrophosphate synthetase [Sulfolobus acidocaldarius
DSM 639]
gi|41018481|sp|Q9HH76|UPPS_SULAC RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|9988414|dbj|BAB12723.1| cis-polyprenyl diphosphate synthase [Sulfolobus acidocaldarius]
gi|68567204|gb|AAY80133.1| undecaprenyl pyrophosphate synthetase [Sulfolobus acidocaldarius
DSM 639]
Length = 262
Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 127/242 (52%), Gaps = 4/242 (1%)
Query: 1 MVASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
++ S + P P H+GII DGN RWA LP G+ G +++ E+GI +T
Sbjct: 21 ILWSQIKDGPFPFHVGIIPDGNRRWARNNRLPLDQGYYTGYVKLRDVLTWILEIGISTVT 80
Query: 60 IFAFSINNW-RRPVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCV 116
+FA S N +R E+S + K +K L + S + K ++V+ IG L +D+ +
Sbjct: 81 VFALSAENCEKRTQQELSMIFKYLKIGLDELLTSDLVHKYQVRVKAIGMLDKLPEDLKKL 140
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT 176
+ + E T L +A Y R EI AI+ I D + G + S +D S KYL
Sbjct: 141 VVDLESTTEKYNKKKLILAICYGGRQEILDAIRKIMNDYKLGIIDSKSIDESTFRKYLYD 200
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
++ D DL+IR+ GE R+S+FLLW +AYSE F+ YWPDF + + A+ + R R F
Sbjct: 201 QELSDIDLLIRSSGEIRISNFLLWHLAYSELFFVDVYWPDFRKIDLWRAIRSFQKRKRNF 260
Query: 237 GG 238
G
Sbjct: 261 GA 262
>gi|77409697|ref|ZP_00786362.1| undecaprenyl diphosphate synthase [Streptococcus agalactiae COH1]
gi|77171695|gb|EAO74899.1| undecaprenyl diphosphate synthase [Streptococcus agalactiae COH1]
Length = 182
Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 103/179 (57%), Gaps = 4/179 (2%)
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
+ NW RP E+ ++ L F K L KNN++V+VIG+ L ++ A +T
Sbjct: 4 LQNWSRPDDEVKFIMNLPVEFFDKYVPELDKNNVRVQVIGDTHKLPKATYDAMQRACLRT 63
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP---- 180
+ N+GL L A NY R EI+ AIK I QD+ + D+ L+A +L T+ +P
Sbjct: 64 KHNSGLVLNFALNYGGRSEITNAIKEIAQDVLEAKLNPDDITEDLVANHLMTNSLPYLYR 123
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDLIIRT GE RLS+FL WQ AYSEF F P WPDF ++ A+ YN R RRFG +
Sbjct: 124 DPDLIIRTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKDELHKAIVDYNQRHRRFGSV 182
>gi|158314885|ref|YP_001507393.1| undecaprenyl diphosphate synthase [Frankia sp. EAN1pec]
gi|158110290|gb|ABW12487.1| undecaprenyl diphosphate synthase [Frankia sp. EAN1pec]
Length = 258
Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 134/244 (54%), Gaps = 10/244 (4%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIF 61
AS+ + P H+G+IMDGN RWA G+ + GH+ G + ++++ GIK++T+F
Sbjct: 17 ASLKGAELPRHVGLIMDGNRRWARQMGMANPSLGHKFGADHVEDVLSWCEAAGIKHVTVF 76
Query: 62 AFSINNW-RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
S N R +EI+ L+++I+ + + ++ + G +L D LK A
Sbjct: 77 VCSTENLAHREDAEIAFLMRVIEQVVSDKI-ATPDPAWQMHIAGLLDALPDSTARALKNA 135
Query: 121 EDQTR-LNTGLNLFIAFNYSSRDEISRAIKNIFQD-IESGSVCSHDVDSSL----IAKYL 174
E+ TR +TG ++ +A Y R E+ A + + + E+G + D+ +L +A++L
Sbjct: 136 EEVTRSCSTGAHVTLAVGYGGRQEVVDAFRALLHEQAETGGSLA-DLAETLTAEDVARHL 194
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
T+ PDPDL+IRT GE+R+S+FLLWQ AYSE F YWP F F AL Y R R
Sbjct: 195 YTAGQPDPDLVIRTSGEQRMSNFLLWQSAYSELYFCEAYWPAFREIDFLRALRSYAARGR 254
Query: 235 RFGG 238
R G
Sbjct: 255 RHGA 258
>gi|309810960|ref|ZP_07704760.1| putative di-trans,poly-cis-decaprenylcistransferase [Dermacoccus
sp. Ellin185]
gi|308435114|gb|EFP58946.1| putative di-trans,poly-cis-decaprenylcistransferase [Dermacoccus
sp. Ellin185]
Length = 254
Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 124/241 (51%), Gaps = 7/241 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+V + P H+G+++DGN RWA RG GH+ G + ++ E+GI+ +T+
Sbjct: 16 LVKGLPPERLPRHVGLMLDGNRRWAKKRGANTAHGHKAGADNIEPLLTWCEELGIEVVTL 75
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N +R +E++ L+ +I+ + + N + ++G L + L+ A
Sbjct: 76 WLLSTDNLKRSETELAPLLAIIEDVVDE---LSAAGNRRFNLVGALGLLPEATRTRLENA 132
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI----ESGSVCSHDVDSSLIAKYLDT 176
T+ G+ + IA Y R EI A + I D E + + + + YL T
Sbjct: 133 VSATQDGDGMVVNIAVGYGGRQEIVDAFRAILLDAAERGEDMTQLAQRLTIDSVGDYLYT 192
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
PDPDL+IRT GE+RL FLLWQ A+SEF F +WPDF R F AL Y R+RRF
Sbjct: 193 KGQPDPDLVIRTSGEQRLGGFLLWQSAHSEFYFCEAFWPDFRRVDFLRALRAYAERERRF 252
Query: 237 G 237
G
Sbjct: 253 G 253
>gi|241956133|ref|XP_002420787.1| cis-prenyltransferase, putative; dehydrodolichyl diphosphate
synthetase, putative [Candida dubliniensis CD36]
gi|223644129|emb|CAX41872.1| cis-prenyltransferase, putative [Candida dubliniensis CD36]
Length = 327
Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 125/218 (57%), Gaps = 8/218 (3%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+M+ P H+GIIMDGN R+A + GH G + I+ E G+K T++AFS
Sbjct: 26 IMTGPVPQHVGIIMDGNRRYAKTHKIEIKEGHSLGFDTMASILELLYESGVKCATVYAFS 85
Query: 65 INNWRRPVSEISELVKLIKS-FLKKGFYSL--KKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R E+ L++L KS F + + L ++ +K+R++GN L D+L +L+ E
Sbjct: 86 IENFKRSQYEVKWLMELAKSKFTQINQHGLLCEEYGVKIRILGNTKLLPKDVLEILERTE 145
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ T+ N L + F Y+SRDEI+ +IK++ + G + ++ I K+L T DVP
Sbjct: 146 EITKNNKRAVLNVCFPYTSRDEITHSIKSVVDEATKGGI---EITEEAIDKHLYTKDVPP 202
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSE--FVFIPEYWPDF 217
DL++RT G RLSDFLLWQ + VF+ + WP F
Sbjct: 203 LDLLVRTSGTFRLSDFLLWQTVSPDCAVVFVDKLWPAF 240
>gi|50426751|ref|XP_461973.1| DEHA2G09812p [Debaryomyces hansenii CBS767]
gi|49657643|emb|CAG90443.1| DEHA2G09812p [Debaryomyces hansenii]
Length = 306
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 135/227 (59%), Gaps = 13/227 (5%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ SMM +SP P HIG+IMDGN R+A ++ + GH G + +++ ++GI ++T+
Sbjct: 26 IVSMMRTSPIPKHIGLIMDGNRRYAKSKDMELKDGHNAGADSLIQVLNTCYKLGILHVTV 85
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKK------NNIKVRVIGNRLSLDDDIL 114
+AFSI N+ R E+ L L++ LK F S K+ NNI++++IGNR + DIL
Sbjct: 86 YAFSIENFNRSKEEVDTLFALLRDRLK--FISEKEESYARFNNIRIKIIGNRTMIPSDIL 143
Query: 115 CVLKEAEDQTR-LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCS--HDVDSSLIA 171
L++ E++T+ +++ L + F Y+SRD+I +I++I + +ES + S H +L
Sbjct: 144 KDLEDIEERTKHVSSAKVLNVCFPYTSRDDIVHSIQSIAEKVESKEIESNQHITLETLTN 203
Query: 172 KYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFV-FIPEYWPDF 217
+ P D++IRT G RLSDF+LWQ Y+ + F+ WP+F
Sbjct: 204 NMYMGPNTPPLDILIRTSGHTRLSDFMLWQCNYNCMIEFVDTLWPEF 250
>gi|301114427|ref|XP_002998983.1| undecaprenyl pyrophosphate synthetase, putative [Phytophthora
infestans T30-4]
gi|262111077|gb|EEY69129.1| undecaprenyl pyrophosphate synthetase, putative [Phytophthora
infestans T30-4]
Length = 308
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 133/234 (56%), Gaps = 7/234 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN--NW 68
P HI +IMDGN R+ A+ GH G + + G++ LT++AFS NW
Sbjct: 74 PRHIAVIMDGNRRYGKAKYGAGVRGHADGSKTLVNFTDWCIDAGMQALTVYAFSTGELNW 133
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRV-IGNRLSLDDDILCVLKEAEDQTRLN 127
R SE+ L+ L F+ + K +++VRV + + L I+ +KE E +T+
Sbjct: 134 NREQSEVDALMNLFNQFMHEIVPEALKRDVRVRVLVSDGRKLPAYIVEAIKEIETKTQAC 193
Query: 128 T--GLNLFIAFN--YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
+ LNL + ++ Y +RDEI + I ++ G V D++ L+++ + T+ +PDPD
Sbjct: 194 SRFSLNLCVRYDIRYGARDEIVGVCRKIATEVAKGEVSVEDINEDLLSQRMLTAGLPDPD 253
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
++IRT GE R+S+FLL+Q+AY+E +F+ + WP+ +++ + ++N R RRFG
Sbjct: 254 ILIRTSGELRISNFLLFQIAYTELIFMDKMWPEVTKDDVQDIIIEFNRRKRRFG 307
>gi|183984351|ref|YP_001852642.1| short (C15) chain Z-isoprenyl diphosphate synthase, UppS
[Mycobacterium marinum M]
gi|183177677|gb|ACC42787.1| short (C15) chain Z-isoprenyl diphosphate synthase, UppS
[Mycobacterium marinum M]
Length = 262
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/239 (34%), Positives = 128/239 (53%), Gaps = 7/239 (2%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ SS P HI ++ DGN RWA G + G+R G E++ E GI+ T++
Sbjct: 25 AATSSELPRHIAVLCDGNRRWARDAGYDDVSYGYRMGAAKIAEMLRWCQEAGIEMTTVYL 84
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
S N +R E++ L+++I +++ N VR +G+ L D+ L+EA +
Sbjct: 85 LSTENLQRDADELAALIEIITDVVEE--ICAPANRWSVRTVGDLELLGDEPARRLREAVE 142
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDS---SLIAKYLDTSD 178
T ++ +A Y R EI A++ + +++ +G+ +D+ I++ L TS
Sbjct: 143 STPATAQFHVNVAVGYGGRREIVDAVRALLSKELANGATAEELIDAVSVEGISENLYTSG 202
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDPDL+IRT GE+RLS FLLWQ AYSE F +WP F R F AL Y++R RR+G
Sbjct: 203 QPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRRVDFLRALRDYSMRHRRYG 261
>gi|302819586|ref|XP_002991463.1| hypothetical protein SELMODRAFT_236294 [Selaginella moellendorffii]
gi|300140856|gb|EFJ07575.1| hypothetical protein SELMODRAFT_236294 [Selaginella moellendorffii]
Length = 254
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 134/232 (57%), Gaps = 9/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +I DGN RW A GL KG+ V +I + + GI+ LT FAFS +N++R
Sbjct: 23 PRHVAVIPDGNVRWTKANGL----SAYKGLSVLRDIARISNQWGIEVLTAFAFSTDNFKR 78
Query: 71 PVSEISELVK-LIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
P +E+ +++ L F ++ K+ +KVR IG+ L + + EA + TR +
Sbjct: 79 PKAEVEFVLEHLDNMFTLDHPNTVLKDGLKVRCIGDMSKLPRSLQAKISEAHEMTRDSKD 138
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD----VPDPDLI 185
L +A Y +++ +A + I ++E G V ++D+D + K + ++ V DPDL+
Sbjct: 139 LKFILAIAYGGWEDVLQACQRIASEVEQGVVKANDIDQCYLRKKMLLTEWDEEVGDPDLL 198
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRT GE+RLS++L+ ++Y+E VF + WPDF+ E + A+ ++ R+RR+G
Sbjct: 199 IRTSGEQRLSNYLMNNLSYTELVFTEKLWPDFNEEDYVKAVVEFQERNRRYG 250
>gi|307166541|gb|EFN60608.1| Dehydrodolichyl diphosphate synthase [Camponotus floridanus]
Length = 276
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/207 (39%), Positives = 118/207 (57%), Gaps = 7/207 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IMDGN R+A + GH +G + E + ++GI +T++AFSI N+ R
Sbjct: 14 PKHVAFIMDGNRRYAEKQKKAGIEGHVEGFDKLAETLKWCRDLGIIEVTVYAFSIENFNR 73
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+S L++L + L + I +RVIGN L +D+ + EA T N
Sbjct: 74 SEEEVSGLMELARD-------KLAEQGICIRVIGNLSLLSEDMRKLFAEAMIITENNDKA 126
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IAF+Y+SRDEI+ AIK+I ++ + DV+ +LI++ L T +PDL+IRT G
Sbjct: 127 TLNIAFSYTSRDEITHAIKDIAVGVKHADILPEDVNENLISQCLYTYKSLNPDLLIRTSG 186
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDF 217
E RLSDFLLWQ++ S F WP+F
Sbjct: 187 EVRLSDFLLWQISNSCVYFTNVLWPEF 213
>gi|57242352|ref|ZP_00370291.1| Undecaprenyl pyrophosphate synthetase [Campylobacter upsaliensis
RM3195]
gi|57017032|gb|EAL53814.1| Undecaprenyl pyrophosphate synthetase [Campylobacter upsaliensis
RM3195]
Length = 222
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 126/226 (55%), Gaps = 11/226 (4%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ ++MDGN RWA A+G G+ +G++ ++++ E I LT+FAFS NW RPV
Sbjct: 6 HLAVVMDGNRRWAKAKGFLAKFGYTRGVKTLQKLMSVCIEEQISQLTLFAFSTENWNRPV 65
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+ + KL++ L +KN ++++ IGN L++ + + E++T+ L +
Sbjct: 66 DEVEFIFKLLERCLDDALKEFEKNGVRLKAIGNLSRLNEKLKEKIALVEEKTKHCERLCV 125
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP-DPDLIIRTGGE 191
+A +Y SRDEI RA K + +E G S + S+ + D+P D DL++R G
Sbjct: 126 NLAISYGSRDEIVRAAKRV---VEKGLELSEENLSANL-------DLPLDVDLMLRVGDA 175
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
KRLS+FLLWQ +Y+E F +P + F + +Y R+R FG
Sbjct: 176 KRLSNFLLWQSSYAEICFSETLFPSLTIREFKKIIKEYRKRERTFG 221
>gi|153951523|ref|YP_001398259.1| undecaprenyl diphosphate synthase [Campylobacter jejuni subsp.
doylei 269.97]
gi|152938969|gb|ABS43710.1| undecaprenyl diphosphate synthase [Campylobacter jejuni subsp.
doylei 269.97]
Length = 222
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 127/226 (56%), Gaps = 11/226 (4%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ ++MDGN RWA A+G G+ +G++ +++ E I NL++FAFS NW+RP
Sbjct: 6 HLAVVMDGNRRWARAKGFLTKLGYSQGVKTMQKLMEVCMEENISNLSLFAFSTENWKRPK 65
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
EI + +L+ L + +KNN+++R IG+ L+D + + E++T+ L +
Sbjct: 66 DEIDFIFELLDHCLDEALEKFEKNNVRLRAIGDLSRLEDKVREKITLVEEKTKHCDALCI 125
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP-DPDLIIRTGGE 191
+A +Y +RDEI RA K + + +++ + + L D+P D DL++R G
Sbjct: 126 NLAISYGARDEIIRAAKRVIEK-------RLELNEENLTQNL---DLPLDVDLMLRVGNA 175
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
KRLS+FLLWQ +Y+E F +P ++ F + ++ R+R FG
Sbjct: 176 KRLSNFLLWQCSYAEIYFSETLFPSLTKREFKRIIKEFRNRERTFG 221
>gi|254574318|ref|XP_002494268.1| Cis-prenyltransferase involved in dolichol synthesis [Pichia
pastoris GS115]
gi|238034067|emb|CAY72089.1| Cis-prenyltransferase involved in dolichol synthesis [Pichia
pastoris GS115]
gi|328353911|emb|CCA40308.1| cis-prenyltransferase, dehydrodolichyl diphosphate synthase [Pichia
pastoris CBS 7435]
Length = 280
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/224 (36%), Positives = 127/224 (56%), Gaps = 8/224 (3%)
Query: 1 MVASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ AS++ + P P HIG IMDGN R+A + GH G E ++ + G+K+ T
Sbjct: 21 LFASVVRTGPVPQHIGFIMDGNRRYARINQIEVKEGHNAGFESLARLLQVCYKCGVKSAT 80
Query: 60 IFAFSINNWRRPVSEISELVKLIK----SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILC 115
IFAFSI N++R E+ L++L K ++KG +K IK+R +G++ L D++
Sbjct: 81 IFAFSIENYKRNSFEVDWLMELAKMRFGQMIEKGDLC-EKYGIKIRTLGDKSLLPRDVVE 139
Query: 116 VLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD 175
L+EAE T N+ L + F+Y+SR EI+ I NI ++++ G + D+ +I L
Sbjct: 140 CLEEAERTTANNSKAVLNVCFSYTSRHEITTTIVNILENVKKGLIEPGDITEDMITNNLY 199
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQV--AYSEFVFIPEYWPDF 217
T D P DL+IR+ G +R+SDFLLWQ + + I WP+F
Sbjct: 200 TGDQPPLDLLIRSSGVRRISDFLLWQCHQEHCDIEIIDTLWPEF 243
>gi|195394061|ref|XP_002055664.1| GJ19485 [Drosophila virilis]
gi|194150174|gb|EDW65865.1| GJ19485 [Drosophila virilis]
Length = 303
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/237 (35%), Positives = 131/237 (55%), Gaps = 6/237 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A +S P HI +MDGN R+A ++ L + GH +G +++ ++GI+ +T FA
Sbjct: 19 ALQLSGHIPHHIAFVMDGNRRFARSKQLDKIEGHSRGFSKLADVLRWCLDMGIREVTTFA 78
Query: 63 FSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
FSI N++R E+ L L + S L + L ++ I++RVIGN L L D+ ++
Sbjct: 79 FSIENFKRSNEEVEGLFNLARDKFSKLLEETSRLDEHGIRIRVIGNLLLLPADLQRLIAT 138
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGS--VCSHDVDSSLIAKYLDTS 177
A +T N L L +AF Y+SRDEI++A++ + ++ E + D++ L+ L T
Sbjct: 139 AMLRTERNDKLFLNVAFAYTSRDEITQAVEAVLREDEQADDPLQPTDINERLLEACLYTR 198
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
P PDL+ RT GE RLSDF++WQ++ S F WP + F ++ Y RDR
Sbjct: 199 HSPPPDLVFRTSGETRLSDFMMWQLSTSVLYFTDVLWPQITIWNFLASIVAYQ-RDR 254
>gi|226307742|ref|YP_002767702.1| short-chain Z-isoprenyl diphosphate synthase [Rhodococcus
erythropolis PR4]
gi|229493884|ref|ZP_04387656.1| di-trans,poly-cis-decaprenylcistransferase [Rhodococcus
erythropolis SK121]
gi|226186859|dbj|BAH34963.1| short-chain Z-isoprenyl diphosphate synthase [Rhodococcus
erythropolis PR4]
gi|229319161|gb|EEN85010.1| di-trans,poly-cis-decaprenylcistransferase [Rhodococcus
erythropolis SK121]
Length = 255
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 122/232 (52%), Gaps = 7/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ ++ DGN RWA G + GHR G E++ GI+ TI+ S N R
Sbjct: 25 PRHVAVMCDGNRRWARENGFTDVSHGHRMGALKIAELLEWCDAAGIEMATIYLLSTENLR 84
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ L+++I +++ S N V+++G L + L+EA T TG
Sbjct: 85 REPEELDTLLEIITDVVEE--ISGPGKNWSVQIVGALDLLPPEQSRRLREAAAGTSGRTG 142
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDVPDPDLI 185
++ +A Y R EI+ A++++ +D + ++ ++ I +L TS PDPDL+
Sbjct: 143 THVNVAIGYGGRQEIADAVQSLLRDKIGAGLSGDELIQAVTVDGIDGHLYTSGQPDPDLV 202
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRT GE+RLS FLLWQ AYSE F YWP+F R F AL Y R RRFG
Sbjct: 203 IRTSGEQRLSGFLLWQSAYSEIWFTEAYWPEFRRVDFLRALRDYAARHRRFG 254
>gi|118616083|ref|YP_904415.1| short (C15) chain Z-isoprenyl diphosphate synthase, UppS
[Mycobacterium ulcerans Agy99]
gi|118568193|gb|ABL02944.1| short (C15) chain Z-isoprenyl diphosphate synthase, UppS
[Mycobacterium ulcerans Agy99]
Length = 271
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/239 (34%), Positives = 128/239 (53%), Gaps = 7/239 (2%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ SS P HI ++ DGN RWA G + G+R G E++ E GI+ T++
Sbjct: 34 AATSSELPRHIAVLCDGNRRWARDAGYDDVSYGYRMGAAKIAEMLRWCQEAGIEMTTVYL 93
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
S N +R E++ L+++I +++ N VR +G+ L D+ L+EA +
Sbjct: 94 LSTENLQRDADELAALIEIITDVVEE--ICAPANRWSVRTVGDLELLGDEPARRLREAVE 151
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDS---SLIAKYLDTSD 178
T ++ +A Y R EI A++ + +++ +G+ +D+ I++ L TS
Sbjct: 152 STPATAQFHVNVAVGYGGRREIVDAVRALLSKELANGATAEELIDAVSVEGISENLYTSG 211
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDPDL+IRT GE+RLS FLLWQ AYSE F +WP F R F AL Y++R RR+G
Sbjct: 212 QPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRRVDFLRALRDYSMRHRRYG 270
>gi|57237665|ref|YP_178913.1| undecaprenyl diphosphate synthase [Campylobacter jejuni RM1221]
gi|86150230|ref|ZP_01068457.1| undecaprenyl diphosphate synthase [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|86152074|ref|ZP_01070286.1| undecaprenyl diphosphate synthase [Campylobacter jejuni subsp.
jejuni 260.94]
gi|86153441|ref|ZP_01071645.1| undecaprenyl diphosphate synthase [Campylobacter jejuni subsp.
jejuni HB93-13]
gi|88597571|ref|ZP_01100805.1| undecaprenyl diphosphate synthase [Campylobacter jejuni subsp.
jejuni 84-25]
gi|121612397|ref|YP_001000509.1| undecaprenyl diphosphate synthase [Campylobacter jejuni subsp.
jejuni 81-176]
gi|157415091|ref|YP_001482347.1| undecaprenyl diphosphate synthase [Campylobacter jejuni subsp.
jejuni 81116]
gi|167005445|ref|ZP_02271203.1| putative undecaprenyl diphosphate synthase [Campylobacter jejuni
subsp. jejuni 81-176]
gi|218562452|ref|YP_002344231.1| undecaprenyl diphosphate synthase [Campylobacter jejuni subsp.
jejuni NCTC 11168]
gi|283957188|ref|ZP_06374652.1| undecaprenyl diphosphate synthase [Campylobacter jejuni subsp.
jejuni 1336]
gi|315124342|ref|YP_004066346.1| putative undecaprenyl diphosphate synthase [Campylobacter jejuni
subsp. jejuni ICDCCJ07001]
gi|42559890|sp|Q9PP99|UPPS_CAMJE RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|73920256|sp|Q5HUX2|UPPS_CAMJR RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|57166469|gb|AAW35248.1| undecaprenyl diphosphate synthase [Campylobacter jejuni RM1221]
gi|85839346|gb|EAQ56608.1| undecaprenyl diphosphate synthase [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|85840859|gb|EAQ58109.1| undecaprenyl diphosphate synthase [Campylobacter jejuni subsp.
jejuni 260.94]
gi|85843167|gb|EAQ60378.1| undecaprenyl diphosphate synthase [Campylobacter jejuni subsp.
jejuni HB93-13]
gi|87249397|gb|EAQ72357.1| undecaprenyl diphosphate synthase [Campylobacter jejuni subsp.
jejuni 81-176]
gi|88190163|gb|EAQ94138.1| undecaprenyl diphosphate synthase [Campylobacter jejuni subsp.
jejuni 84-25]
gi|112360158|emb|CAL34952.1| undecaprenyl diphosphate synthase [Campylobacter jejuni subsp.
jejuni NCTC 11168]
gi|157386055|gb|ABV52370.1| putative undecaprenyl diphosphate synthase [Campylobacter jejuni
subsp. jejuni 81116]
gi|283791364|gb|EFC30169.1| undecaprenyl diphosphate synthase [Campylobacter jejuni subsp.
jejuni 1336]
gi|284926069|gb|ADC28421.1| undecaprenyl diphosphate synthase [Campylobacter jejuni subsp.
jejuni IA3902]
gi|307747733|gb|ADN91003.1| Undecaprenyl pyrophosphate synthetase [Campylobacter jejuni subsp.
jejuni M1]
gi|315018064|gb|ADT66157.1| putative undecaprenyl diphosphate synthase [Campylobacter jejuni
subsp. jejuni ICDCCJ07001]
gi|315058274|gb|ADT72603.1| Undecaprenyl pyrophosphate synthetase [Campylobacter jejuni subsp.
jejuni S3]
gi|315928244|gb|EFV07560.1| di-trans,poly-cis-decaprenylcistransferase [Campylobacter jejuni
subsp. jejuni DFVF1099]
gi|315928908|gb|EFV08165.1| undecaprenyl diphosphate synthase [Campylobacter jejuni subsp.
jejuni 305]
Length = 222
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 127/226 (56%), Gaps = 11/226 (4%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ ++MDGN RWA A+G G+ +G++ +++ E I NL++FAFS NW+RP
Sbjct: 6 HLAVVMDGNRRWARAKGFLAKLGYSQGVKTMQKLMEVCMEENISNLSLFAFSTENWKRPK 65
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
EI + +L+ L + +KNN+++R IG+ L+D + + E++T+ L +
Sbjct: 66 DEIDFIFELLDRCLDEALEKFEKNNVRLRAIGDLSRLEDKVREKITLVEEKTKHCDALCV 125
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP-DPDLIIRTGGE 191
+A +Y +RDEI RA K + + +++ + + L D+P D DL++R G
Sbjct: 126 NLAISYGARDEIIRAAKRVIEK-------KLELNEENLTQNL---DLPLDVDLMLRVGNA 175
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
KRLS+FLLWQ +Y+E F +P ++ F + ++ R+R FG
Sbjct: 176 KRLSNFLLWQCSYAEIYFSETLFPSLTKREFKRIIKEFRNRERTFG 221
>gi|26331826|dbj|BAC29643.1| unnamed protein product [Mus musculus]
Length = 333
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 133/244 (54%), Gaps = 7/244 (2%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A+++ + P P HI IMDGN R+A + R GH +G E + +GI +T+
Sbjct: 16 CANIIKAGPVPKHILFIMDGNRRYAKKCQVERQEGHTQGFNKLAETLRWCLNLGILEVTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R SE+ L+ L + S L + L+K+ + +RV+G+ L D+ +
Sbjct: 76 YAFSIENFKRSKSEVDGLLDLARQKFSCLMEEQEKLQKHGVCIRVLGDLHLLPLDLQEKI 135
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
A T+ L + F Y+SR EI+ A++ + +E G + DV SL+ K L ++
Sbjct: 136 AHAIQATKNYNKCFLNVCFAYTSRHEIANAVREMAWGVEQGLLEPSDVSESLLDKCLYSN 195
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
P PD++IRT GE RLSDFLLWQ ++S VF P WP+++ A+ Q+ R G
Sbjct: 196 HSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLCEAILQFQ---RNHG 252
Query: 238 GLSK 241
L K
Sbjct: 253 ALQK 256
>gi|111022819|ref|YP_705791.1| di-trans,poly-cis-decaprenylcistransferase [Rhodococcus jostii
RHA1]
gi|110822349|gb|ABG97633.1| di-trans,poly-cis-decaprenylcistransferase [Rhodococcus jostii
RHA1]
Length = 279
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 122/232 (52%), Gaps = 7/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI ++ DGN RWA G + GHR G +E++ GI+ TI+ S N R
Sbjct: 49 PRHIAVMCDGNRRWARENGFEDVSHGHRMGALKISEMLGWCDAAGIEMATIYLLSTENLR 108
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ L+++I +++ S N V+++G L + L++A T TG
Sbjct: 109 RDPGELDTLLEIITDVVEE--ISGPDKNWSVKIVGALDLLPAEQSRRLRDAAAGTEGRTG 166
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDVPDPDLI 185
++ +A Y R EI+ A++++ + + D+ S+ I +L TS PDPDL+
Sbjct: 167 THVNVAIGYGGRQEIADAVQSLLSEKLLAGLSGDDLVKSITIDGIDGHLYTSGQPDPDLV 226
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRT GE+RLS FLLWQ AYSE F YWP+F R F AL Y R RRFG
Sbjct: 227 IRTSGEQRLSGFLLWQSAYSEIWFTEAYWPEFRRVDFLRALRDYAARHRRFG 278
>gi|330465770|ref|YP_004403513.1| undecaprenyl diphosphate synthase [Verrucosispora maris AB-18-032]
gi|328808741|gb|AEB42913.1| undecaprenyl diphosphate synthase [Verrucosispora maris AB-18-032]
Length = 256
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/243 (35%), Positives = 132/243 (54%), Gaps = 8/243 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARG-LPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ A + P H+G++ DGN RWA G + GHR G E E++ G+ ++T
Sbjct: 15 LTAKLAGRPVPRHVGVMCDGNRRWAREMGFVDPNDGHRMGAERIKELLRWCDAAGVGHVT 74
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++ S +N RP +E+ L+++I+ + + N ++R++G L LK
Sbjct: 75 LWLLSTDNLSRPAAELDPLLQIIEDLTTE--LAEAGNPWRLRMVGALDVLPAHHAAALKA 132
Query: 120 AEDQTR-LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYL 174
AE++TR + G + IA Y R EI+ A++++ + + ++ SL I+++L
Sbjct: 133 AEERTRDRSGGAQVNIAVGYGGRREIADAVRSLLLEHAANGGTLEELAGSLDVDDISEHL 192
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
T +PDPDLIIRT GE+RLS F+LWQ A+SEF F WPDF R F AL Y R R
Sbjct: 193 YTRGLPDPDLIIRTSGEQRLSGFMLWQSAHSEFYFCELNWPDFRRVDFLRALRSYATRQR 252
Query: 235 RFG 237
RFG
Sbjct: 253 RFG 255
>gi|222823978|ref|YP_002575552.1| undecaprenyl diphosphate synthetase [Campylobacter lari RM2100]
gi|222539200|gb|ACM64301.1| undecaprenyl diphosphate synthetase [Campylobacter lari RM2100]
Length = 222
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 124/225 (55%), Gaps = 9/225 (4%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ ++MDGN RWA GL G+ +G +V +I+ + I+NLT++AFS NW+RP
Sbjct: 6 HLAVVMDGNRRWARKNGLLEKIGYTQGAKVVEKIIEVCVDEKIQNLTLYAFSTENWQRPK 65
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+ L KL+ +L + N ++ + IGN LD+ L ++ ++QT+ T L +
Sbjct: 66 EEVEFLFKLLNKYLDESLNKFITNEVRFKAIGNLSLLDELTLKKIQNFQEQTKNYTKLCV 125
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A +Y +DEI RA+K + + S +++ I LD S+ D DL +R G K
Sbjct: 126 NLAISYGGKDEIVRAVKKVLEK-------SLEINEENIQANLDLSE--DVDLFLRVGSAK 176
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
R+S+FL+WQ +Y+E F +P +++ + + + R R FG
Sbjct: 177 RISNFLIWQTSYAEIYFSQTLFPALTKKEITNIITDFKKRKRTFG 221
>gi|159036466|ref|YP_001535719.1| undecaprenyl diphosphate synthase [Salinispora arenicola CNS-205]
gi|157915301|gb|ABV96728.1| undecaprenyl diphosphate synthase [Salinispora arenicola CNS-205]
Length = 256
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/243 (34%), Positives = 131/243 (53%), Gaps = 8/243 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARG-LPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ A + P H+G++ DGN RWA G + GHR G E E++ G+ ++T
Sbjct: 15 LTAKLAGKPVPRHVGVMCDGNRRWAREMGFVDPNDGHRVGAERIKELLRWCDAAGVGHVT 74
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++ S +N RP +++ L+++I+ + + + N ++R++G L LK
Sbjct: 75 LWLLSTDNLTRPAAQLDPLLQIIEDLTLE--LAEEGNPWRLRMVGALDVLPAPHAAGLKA 132
Query: 120 AEDQTRLNTG-LNLFIAFNYSSRDEISRAIKNIF-QDIESGSV---CSHDVDSSLIAKYL 174
AE++TR G + IA Y R EI+ A++++ Q ++G+ + D I ++L
Sbjct: 133 AEERTRDRVGGAQVNIAVGYGGRREIADAVRSLLHQHAKAGTSIEQLAETFDVEHITEHL 192
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
T +PDPDLIIRT GE+R+S FLLWQ +SEF F WP+F R F AL Y R R
Sbjct: 193 YTRGLPDPDLIIRTSGEQRMSGFLLWQSVHSEFYFCELNWPEFRRVDFLRALRSYATRQR 252
Query: 235 RFG 237
RFG
Sbjct: 253 RFG 255
>gi|213405209|ref|XP_002173376.1| dehydrodolichyl diphosphate synthase [Schizosaccharomyces japonicus
yFS275]
gi|212001423|gb|EEB07083.1| dehydrodolichyl diphosphate synthase [Schizosaccharomyces japonicus
yFS275]
Length = 265
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 128/235 (54%), Gaps = 4/235 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
MV + SS P HIG +MDGN RWA + GH G E +++ +G+K ++
Sbjct: 25 MVNIIRCSSVPQHIGFVMDGNRRWARQHRMETAEGHSLGFETLKDLLRVCLRLGVKEVSA 84
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
F FS+ N++R E+ ++++ KS L + + + NI++RV+G+ L DD+
Sbjct: 85 FGFSLENFKRSKYEVDMIMEIAKSSLAQICSHGDLVDQYNIRIRVVGDLDRLPDDLHEQF 144
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+ +T NTG L + F Y+SR EI+++++ + + E G + ++D + K L +
Sbjct: 145 VKIMKRTEKNTGATLNLCFPYTSRYEITQSLQRLVKKAEDGRLTPDEIDEKVFEKCLLIT 204
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQV-AYSEFVFIPEYWPDFSRELFFHALNQYNL 231
D D+++RT G KRLSDF+LWQ ++ F+ YWPDF F + +Y +
Sbjct: 205 DSHPLDILVRTSGVKRLSDFMLWQCHENTDIQFVRNYWPDFKVWRFLPMILRYQI 259
>gi|238062721|ref|ZP_04607430.1| undecaprenyl-diphosphate synthase [Micromonospora sp. ATCC 39149]
gi|237884532|gb|EEP73360.1| undecaprenyl-diphosphate synthase [Micromonospora sp. ATCC 39149]
Length = 256
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/243 (34%), Positives = 132/243 (54%), Gaps = 8/243 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARG-LPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ A++ P H+G++ DGN RWA G + GHR G E E++ G+ ++T
Sbjct: 15 LTATLAGKPVPRHVGVMCDGNRRWAREMGFVDPNDGHRMGAERIKELLRWCDAAGVGHVT 74
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++ S +N RP E+ L+++I+ + + + N ++R++G L LK
Sbjct: 75 LWLLSTDNLSRPAEELDPLLQIIEDLSTE--LAEEGNPWRLRMVGALDVLPAHHAAALKA 132
Query: 120 AEDQTRLNTG-LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYL 174
AE++TR G + IA Y R EI+ A++++ + + ++ +L I+++L
Sbjct: 133 AEERTRERAGGAQVNIAVGYGGRREIADAVRSLLHEHAAAGGTIEELAETLDVDDISEHL 192
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
T +PDPDLIIRT GE+RLS F+LWQ A+SEF F WPDF R F AL Y R R
Sbjct: 193 YTRGLPDPDLIIRTSGEQRLSGFMLWQSAHSEFYFCELNWPDFRRVDFLRALRSYANRQR 252
Query: 235 RFG 237
RFG
Sbjct: 253 RFG 255
>gi|126328611|ref|XP_001363623.1| PREDICTED: similar to dehydrodolichyl diphosphate synthase isoform
2 [Monodelphis domestica]
Length = 334
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/221 (37%), Positives = 132/221 (59%), Gaps = 4/221 (1%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A+++ + P P HI IMDGN R+A + R GH +G + E + +GI+ +T+
Sbjct: 16 CANIIKAGPMPKHIAFIMDGNRRYAQKCQVERQEGHSQGFDKLAETLRWCLNLGIREVTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R +E+ L++L + + L + L+K+ + +RV+G+ L D+ ++
Sbjct: 76 YAFSIENFKRSKNEVDGLMELARQKFTRLMEEQEKLEKHGVCIRVLGDLQLLPLDLQELI 135
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+A T + L + F Y+SR EIS A+K + +E G + DV SL+ K L T+
Sbjct: 136 AKAVQATHNYSKCFLNVCFAYTSRHEISNAVKEMAWGVEQGLLDPSDVSESLLDKCLYTN 195
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS 218
+ P+PD++IRT GE RLSDFLLWQ ++S VF P WP++S
Sbjct: 196 NSPNPDILIRTSGEVRLSDFLLWQTSHSCLVFQPILWPEYS 236
>gi|126328609|ref|XP_001363539.1| PREDICTED: similar to dehydrodolichyl diphosphate synthase isoform
1 [Monodelphis domestica]
Length = 333
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/221 (37%), Positives = 132/221 (59%), Gaps = 4/221 (1%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A+++ + P P HI IMDGN R+A + R GH +G + E + +GI+ +T+
Sbjct: 16 CANIIKAGPMPKHIAFIMDGNRRYAQKCQVERQEGHSQGFDKLAETLRWCLNLGIREVTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R +E+ L++L + + L + L+K+ + +RV+G+ L D+ ++
Sbjct: 76 YAFSIENFKRSKNEVDGLMELARQKFTRLMEEQEKLEKHGVCIRVLGDLQLLPLDLQELI 135
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+A T + L + F Y+SR EIS A+K + +E G + DV SL+ K L T+
Sbjct: 136 AKAVQATHNYSKCFLNVCFAYTSRHEISNAVKEMAWGVEQGLLDPSDVSESLLDKCLYTN 195
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS 218
+ P+PD++IRT GE RLSDFLLWQ ++S VF P WP++S
Sbjct: 196 NSPNPDILIRTSGEVRLSDFLLWQTSHSCLVFQPILWPEYS 236
>gi|262277276|ref|ZP_06055069.1| undecaprenyl pyrophosphate synthetase 1 [alpha proteobacterium
HIMB114]
gi|262224379|gb|EEY74838.1| undecaprenyl pyrophosphate synthetase 1 [alpha proteobacterium
HIMB114]
Length = 226
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/230 (37%), Positives = 125/230 (54%), Gaps = 9/230 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW-R 69
P H+ IIMDGNGRW R GH+KG+E + + IKNLT++A S +N +
Sbjct: 4 PSHVAIIMDGNGRWGLKNYKNRIKGHQKGVENIKPFIDFFLKKKIKNLTLYALSKDNLLK 63
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL-NT 128
R EI+ ++ L+ +L++ KN I + IG +L +I +LK+ T+L
Sbjct: 64 RDQKEINNILDLLDKYLRQNNDFFIKNKIHLNFIGENRNLPKNIKILLKKTSKVTKLPKA 123
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
L L IAFNYSSR +I +IK F++ + ++ + + K L T D DL+IRT
Sbjct: 124 NLVLNIAFNYSSRSDIILSIKKTFKNKNNLTIKN-------LTKNLSTYISGDLDLVIRT 176
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GG KRLSDFLLW+ +YSE F + WPDF+ L ++ R FG
Sbjct: 177 GGHKRLSDFLLWESSYSEIYFCNKLWPDFNIRDLNRLLYNFSKIKRNFGS 226
>gi|284161607|ref|YP_003400230.1| undecaprenyl diphosphate synthase [Archaeoglobus profundus DSM
5631]
gi|284011604|gb|ADB57557.1| undecaprenyl diphosphate synthase [Archaeoglobus profundus DSM
5631]
Length = 252
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/235 (33%), Positives = 126/235 (53%), Gaps = 3/235 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + PP H+ IMDGN R+A +GLP GH G E++ E+ IK +T
Sbjct: 12 LLKEVKKFPPPKHVAFIMDGNRRYAKKKGLPSYMGHFFGSRKAEEVLKWCLELKIKTVTA 71
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFS N+RR E L KL++ L++ + KN ++VR++G R L +++ V+
Sbjct: 72 YAFSTENFRRSEEEKINLFKLMERELRRLMEDRRIHKNKVRVRIVGKRELLPENVQKVVD 131
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
+ E TR NL IA Y R E+ AI+ + + +E G + ++D LI ++L + +
Sbjct: 132 DLERATRDYDRYNLNIALAYGGRQELVDAIRCVLRLVEGGKIRPEEIDRHLIERFLYSDN 191
Query: 179 -VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLR 232
D++IRTGGE+RLS+FL WQ F +WP+F + F A+ + R
Sbjct: 192 GYESVDILIRTGGEQRLSNFLPWQTTNCLAYFSDVFWPEFRKIDFLRAIRMWQRR 246
>gi|332671442|ref|YP_004454450.1| undecaprenyl diphosphate synthase [Cellulomonas fimi ATCC 484]
gi|332340480|gb|AEE47063.1| undecaprenyl diphosphate synthase [Cellulomonas fimi ATCC 484]
Length = 253
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/241 (34%), Positives = 133/241 (55%), Gaps = 7/241 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ AS+ P H+G+I+DGN RWA + G GH+ G + E++ + +VG++ +T+
Sbjct: 15 LAASLPRDRVPRHVGVILDGNRRWARSMGESTAHGHQAGADKIAELLGWSEDVGVEVVTL 74
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N RP E+ L+ +I+ ++ + +++ +G+ L L EA
Sbjct: 75 WMLSTDNLNRPAEELDPLLAIIEHAVRD---LAESGRWRLQAVGSLHLLPPQTAAALHEA 131
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD-IESGSVC---SHDVDSSLIAKYLDT 176
E+ T TGL++ +A Y R EI+ A+++ ++ ++G+ + D IA+ L T
Sbjct: 132 EEATADVTGLHVNVAVGYGGRHEIADAVRSFLREHAQTGTSVDELAEQFDVEHIAERLYT 191
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
PDPDL+IRT GE+RL FLLWQ +SEF F YWPDF R F A+ + R+RR
Sbjct: 192 KGQPDPDLVIRTSGEQRLGGFLLWQSVHSEFYFCEAYWPDFRRVDFLRAVRSFAARERRL 251
Query: 237 G 237
G
Sbjct: 252 G 252
>gi|315638465|ref|ZP_07893642.1| undecaprenyl diphosphate synthase [Campylobacter upsaliensis JV21]
gi|315481456|gb|EFU72083.1| undecaprenyl diphosphate synthase [Campylobacter upsaliensis JV21]
Length = 222
Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 125/226 (55%), Gaps = 11/226 (4%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ ++MDGN RWA A+G G+ +G++ ++++ E I LT+FAFS NW RP
Sbjct: 6 HLAVVMDGNRRWAKAKGFLAKFGYTRGVKTLQKLMSVCIEEQISQLTLFAFSTENWNRPA 65
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+ + KL++ L +KN ++++ IG+ LD+ + + E++T+ L +
Sbjct: 66 DEVEFIFKLLERCLDDALKEFEKNGVRLKAIGDLSRLDEKLKEKIALVEEKTKHCERLCV 125
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP-DPDLIIRTGGE 191
+A +Y SRDEI RA K + +E G S + S+ + D+P D DL++R G
Sbjct: 126 NLAISYGSRDEIVRAAKRV---VEKGLELSEENLSANL-------DLPLDVDLMLRVGNA 175
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
KRLS+FLLWQ +Y+E F +P + F + +Y R+R FG
Sbjct: 176 KRLSNFLLWQSSYAEICFSETLFPSLTIREFKKIIKEYRKRERTFG 221
>gi|269976189|ref|ZP_06183185.1| undecaprenyl pyrophosphate synthetase 1 [Mobiluncus mulieris 28-1]
gi|269935518|gb|EEZ92056.1| undecaprenyl pyrophosphate synthetase 1 [Mobiluncus mulieris 28-1]
Length = 258
Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 120/235 (51%), Gaps = 16/235 (6%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGII+DGN RWA A G P GH++G E++ ++ +T++ SI+N +R
Sbjct: 31 PAHIGIILDGNRRWARAEGAPDVKGHQRGALKIREVLEWCEAWPVRVVTLWMLSIDNLQR 90
Query: 71 PVSEISELV----KLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
+E+ L K ++ + G Y L RV+G+ SL D L + A +T L
Sbjct: 91 DAAELEPLQDTIGKTVQRLQRAGKYRL-------RVLGD-TSLIDPKLAEILAAAHETGL 142
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDVPDP 182
+ + IA Y R EI A+K + + V+ + I +L T PDP
Sbjct: 143 AEAMVVNIAVAYGGRQEIVAAVKEYLHEQAAAGRGLAQVEREITLEDIEAHLYTKGQPDP 202
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRT GE+RLS FLLWQ A SEF F YWP F F AL Y+ R+RR G
Sbjct: 203 DLVIRTSGEQRLSGFLLWQSANSEFYFCETYWPSFRHIDFLRALRDYSSRERRNG 257
>gi|195131549|ref|XP_002010213.1| GI14820 [Drosophila mojavensis]
gi|193908663|gb|EDW07530.1| GI14820 [Drosophila mojavensis]
Length = 304
Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 123/214 (57%), Gaps = 6/214 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI +MDGN R+A ++ L + GH +G +++ ++GIK +T FAFSI N++R
Sbjct: 27 PNHIAFVMDGNRRFARSKQLDKIEGHSRGFSKLADVLRWCVDLGIKEVTTFAFSIENFKR 86
Query: 71 PVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
E+ L L + K L ++ I++RVIGN L L +D+ + A +T N
Sbjct: 87 SNEEVEGLFNLAREKFAKLLEETNRLNEHGIRIRVIGNILLLPEDLQRHIATAMLRTEHN 146
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGS---VCSHDVDSSLIAKYLDTSDVPDPDL 184
L L +AF Y+SRDE+++A++++ ++ ES + D++ L+ + L T P PD+
Sbjct: 147 DKLFLNVAFAYTSRDEMTQAVESVLKNDESADDEPLHPSDINERLLEECLYTRHSPPPDM 206
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS 218
+ RT GE RLSDF++WQ++ S F WP +
Sbjct: 207 VFRTSGETRLSDFMMWQLSSSVLYFTDVLWPQIT 240
>gi|254254359|ref|ZP_04947676.1| Di-trans-poly-cis-decaprenylcistransferase [Burkholderia dolosa
AUO158]
gi|124899004|gb|EAY70847.1| Di-trans-poly-cis-decaprenylcistransferase [Burkholderia dolosa
AUO158]
Length = 297
Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 133/240 (55%), Gaps = 7/240 (2%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
V S +S P P H+ +I+DGN RWA G+ G+R G + +++ E GI +T+
Sbjct: 60 VESAAASQPVPTHVAVILDGNRRWAERCGVSIADGYRAGGRNVHALLSWCEEAGIPFVTL 119
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S N R +E+ L+ +I + S + ++ VIG+ L ++ A
Sbjct: 120 WPLSTENLSRDAAELGGLLAVIADVFDELAASGRS---RLHVIGDLTKLPAATAARIRAA 176
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD-IESGSV--CSHDVDSSLIAKYLDTS 177
E +T GL++ +A YS R ++ AI+ + ++ + +G+V + + IA L T+
Sbjct: 177 EQRTTHAHGLDVTVAVAYSGRLDLLHAIRTLIEEHVAAGTVDRLPAQLSAESIASRLYTA 236
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
P+PDL+IRT GE+RLS+F+LWQ A+SEF F P WPDF R+ F A++ Y R RRFG
Sbjct: 237 GQPEPDLVIRTSGEQRLSNFMLWQTAFSEFYFSPVCWPDFGRDDFERAIDAYGKRARRFG 296
>gi|302865360|ref|YP_003833997.1| undecaprenyl diphosphate synthase [Micromonospora aurantiaca ATCC
27029]
gi|315501904|ref|YP_004080791.1| undecaprenyl diphosphate synthase [Micromonospora sp. L5]
gi|302568219|gb|ADL44421.1| undecaprenyl diphosphate synthase [Micromonospora aurantiaca ATCC
27029]
gi|315408523|gb|ADU06640.1| undecaprenyl diphosphate synthase [Micromonospora sp. L5]
Length = 256
Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 84/243 (34%), Positives = 134/243 (55%), Gaps = 8/243 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARG-LPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ A + P H+G++ DGN RWA G + GHR G E E++ G+ ++T
Sbjct: 15 LTAKLAGKPVPAHVGVMCDGNRRWAREMGFVDPNDGHRMGAERIKELLRWCDAAGVGHVT 74
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++ S +N RP +E+ L+++I+ + + + N ++R++G L LK
Sbjct: 75 LWLLSTDNLSRPAAELDPLLQIIEDLTTE--LAEEGNPWRLRMVGALDVLPAQHAAALKA 132
Query: 120 AEDQTR-LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYL 174
AE++TR + G + IA Y R EI+ A++++ + + ++ +S+ I+++L
Sbjct: 133 AEERTRDRDGGAQVNIAVGYGGRREIADAVRSLLVEHAANGGTIEELATSINVDHISEHL 192
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
T +PDPDLIIRT GE+RLS F+LWQ A+SEF F WPDF + F AL Y R R
Sbjct: 193 YTKGLPDPDLIIRTSGEQRLSGFMLWQSAHSEFYFCELNWPDFRKVDFLRALRSYATRQR 252
Query: 235 RFG 237
RFG
Sbjct: 253 RFG 255
>gi|150402515|ref|YP_001329809.1| undecaprenyl diphosphate synthase [Methanococcus maripaludis C7]
gi|150033545|gb|ABR65658.1| undecaprenyl diphosphate synthase [Methanococcus maripaludis C7]
Length = 264
Score = 142 bits (357), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 136/241 (56%), Gaps = 5/241 (2%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ S +S P P H+GIIMDGN R A G GH G +E++ +GI +T+
Sbjct: 23 LESKISKYPLPKHVGIIMDGNRRLAKKLGENPELGHNLGASKVHEVINWCVSLGIHTVTL 82
Query: 61 FAFSINNWRRPVSEISELVKLI-KSFLKKGFY-SLKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFS+ N+ RP +E+ L+ L K F++ + + K+ I+V VIG R L + + +
Sbjct: 83 YAFSLENFNRPENEVKVLMDLFEKEFIEIADHPGVHKDKIRVSVIGRREMLPEYVQKAIM 142
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
AE++T+ + + A Y + EI ++K I + ++ + D+ LI+K L TS+
Sbjct: 143 YAEEKTKDYSDHFVNFAIAYGGQQEIIDSVKKIAEKVKDNEIEIEDITIELISKNLYTSN 202
Query: 179 VP--DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
+P +PDLIIRT GE+R+S+FL WQ YSE F YWP F + ++ +Y R+RR+
Sbjct: 203 LPSPNPDLIIRTSGEERISNFLTWQSCYSELYFCETYWPTFRKVDLLRSIREYQKRERRY 262
Query: 237 G 237
G
Sbjct: 263 G 263
>gi|323446987|gb|EGB02967.1| hypothetical protein AURANDRAFT_16553 [Aureococcus anophagefferens]
Length = 230
Score = 142 bits (357), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 125/231 (54%), Gaps = 6/231 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLP--RCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ IMDGN R+ A R P R GH G E+V G+ +T FAFS NW
Sbjct: 2 PAHVAFIMDGNRRFGAKRFGPARRLEGHAAGGRKLGEVVDWCLRAGVAEVTAFAFSTENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS-LDDDILCVLKEAEDQTRL- 126
R +E++ L++ + ++ ++ V+ + L D+ L+ E +T
Sbjct: 62 HRDSAEVALLMRTFVDQCAEILKHAREKRVRCDVLCTDATRLPADVRAALETLETETAFA 121
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
+ L L +A +Y +R EI+ A + + + + +G + + DVD + + L PDL++
Sbjct: 122 DAALTLHLAVSYGARGEIASAARKLAERVAAGEIDAGDVDEASLGAALALR--SPPDLLV 179
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE+RLS+FLLWQ+AY+E VF+ ++WP+ + + F L++Y R RR+G
Sbjct: 180 RTSGERRLSNFLLWQMAYTELVFLDKHWPELAEDDFDAVLDEYARRQRRYG 230
>gi|226365327|ref|YP_002783110.1| short-chain Z-isoprenyl diphosphate synthase [Rhodococcus opacus
B4]
gi|226243817|dbj|BAH54165.1| short-chain Z-isoprenyl diphosphate synthase [Rhodococcus opacus
B4]
Length = 255
Score = 142 bits (357), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 122/232 (52%), Gaps = 7/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI ++ DGN RWA G + GHR G +E++ GI+ TI+ S N R
Sbjct: 25 PRHIAVMCDGNRRWARENGFEDVSHGHRMGALKISEMLGWCDAAGIEMATIYLLSTENLR 84
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ L+++I +++ S N V+++G L + L++A T TG
Sbjct: 85 RDPEELDTLLEIITDVVEE--ISGPDKNWSVKIVGALDLLPAEQSRRLRDAAAGTEGRTG 142
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDVPDPDLI 185
++ +A Y R EI+ A++++ + + ++ S+ I +L TS PDPDL+
Sbjct: 143 THVNVAIGYGGRQEIADAVQSLLSEKLLAGLAGDELVKSITVDGIDGHLYTSGQPDPDLV 202
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRT GE+RLS FLLWQ AYSE F YWP+F R F AL Y R RRFG
Sbjct: 203 IRTSGEQRLSGFLLWQSAYSEIWFTEAYWPEFRRVDFLRALRDYAARHRRFG 254
>gi|84497880|ref|ZP_00996677.1| di-trans-poly-cis-decaprenylcistransferase [Janibacter sp.
HTCC2649]
gi|84381380|gb|EAP97263.1| di-trans-poly-cis-decaprenylcistransferase [Janibacter sp.
HTCC2649]
Length = 267
Score = 142 bits (357), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 128/242 (52%), Gaps = 7/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + S P H+G+++DGN RWA ARG GH+ G + ++ EVG++ +T+
Sbjct: 29 LTKRLPPESVPRHVGVMLDGNRRWAKARGAGTSEGHQAGADNIAHFLSWCEEVGVEVVTL 88
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N R SE+ L+ +I+ + + + ++ +G L L+ A
Sbjct: 89 WLLSTDNLSRAESELRPLLGIIERTVDE---LADSHQWRLNPVGALSLLPAATRERLEGA 145
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIF-QDIESGSV---CSHDVDSSLIAKYLDT 176
+T GL + IA Y R EI+ A++++ + + G+ + +D IA +L T
Sbjct: 146 ATRTAEVDGLLVNIAVGYGGRREIADAVRSLLLEHADRGTTIEELAEFLDVEHIADHLYT 205
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
PDPDL+IRT GE+RL FLLWQ A+SEF F YWPDF + F AL Y R+RRF
Sbjct: 206 KGQPDPDLVIRTSGEQRLGGFLLWQSAHSEFYFCEAYWPDFRKVDFLRALRAYGERNRRF 265
Query: 237 GG 238
G
Sbjct: 266 GA 267
>gi|146418124|ref|XP_001485028.1| hypothetical protein PGUG_02757 [Meyerozyma guilliermondii ATCC
6260]
gi|146390501|gb|EDK38659.1| hypothetical protein PGUG_02757 [Meyerozyma guilliermondii ATCC
6260]
Length = 318
Score = 142 bits (357), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 136/244 (55%), Gaps = 10/244 (4%)
Query: 4 SMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+M+ + P P HI IMDGN R++ + GH KG EV E++ A ++ I ++T++A
Sbjct: 51 NMLRTGPNPKHIAFIMDGNRRFSKRNHMKLADGHSKGAEVLFEVLTTAYQLDISHVTVYA 110
Query: 63 FSINNWRRPVSEISELVKLIK---SFLKKGFYSLKK-NNIKVRVIGNRLSLDDDILCVLK 118
FSI N+ RP E+ L L++ + L S + N++K+++IGNR + DDIL L+
Sbjct: 111 FSIENFNRPQDEVDTLFGLLRDKLAILADNETSFAQVNHVKIKIIGNRSYIPDDILSQLE 170
Query: 119 EAEDQT-RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAK--YLD 175
E E +T + ++ L + F Y+SRD+I+ A++ + + S + D++ ++ Y+D
Sbjct: 171 EIERKTNKPDSHKVLNVCFPYTSRDDITEAMRKVVSSLVSSDLQRQDLNEDVLQHQMYMD 230
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQ-VAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
+ P D++IRT G RLSDF+LWQ A + F+ WP+F FF L ++
Sbjct: 231 -PNTPQLDILIRTSGHTRLSDFMLWQCTANCDIEFVETLWPEFGFFQFFQILVKWGWSKT 289
Query: 235 RFGG 238
G
Sbjct: 290 ALAG 293
>gi|240849357|ref|NP_001155508.1| dehydrodolichyl diphosphate synthase-like [Acyrthosiphon pisum]
gi|239789978|dbj|BAH71580.1| ACYPI003077 [Acyrthosiphon pisum]
Length = 287
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 123/229 (53%), Gaps = 3/229 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IMDGN R+A + + + GH +G + E + +GIK +T++AFS++N++R
Sbjct: 26 PKHVAFIMDGNRRYAKKKSVAKQEGHVRGFDKLAETLQWCLHLGIKEVTVYAFSLDNFKR 85
Query: 71 PVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
EI L L + K+ L ++ + + +GN L DD++ ++ E+ T+ N
Sbjct: 86 TQEEIDALFDLAREKFKRLLEEKDKLNEHGVCINFVGNIKKLPDDLIKLIAESMLITKQN 145
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L +AF+Y+ DE++ A I I++ + D+ ++ + T P PDL+IR
Sbjct: 146 NKAFLNVAFSYTGHDELTNAFNKISLGIKNNDLEESDLSVEILDNCMYTYPSPPPDLLIR 205
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
T GE RLSDF++WQ +YS F P WP+F+ F A+ Y R F
Sbjct: 206 TSGETRLSDFMIWQCSYSYIYFTPVLWPEFTAWDFMIAIFMYQSNFRAF 254
>gi|255514170|gb|EET90432.1| undecaprenyl diphosphate synthase [Candidatus Micrarchaeum
acidiphilum ARMAN-2]
Length = 238
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 125/231 (54%), Gaps = 6/231 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR- 69
P+++G+I DGN RWA + G+ GI F + + G K LT++A S N +
Sbjct: 9 PENVGLIPDGNRRWAKTHKMDLLRGYDAGINKFLDFSLWLRDFGAKTLTVWALSTENIKN 68
Query: 70 RPVSEISELVKL-IKSFL-KKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
R +E++ L KL IK+ K+ ++ N +K+RVIGN L D + LK E TR N
Sbjct: 69 RKKNELNALYKLYIKTTKDKRALGIIRDNKVKIRVIGNMNLLPDKVRNALKGLEHDTRNN 128
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
G + + Y RD+I A K + ++ G + V+ ++ L T VPDPDL+I
Sbjct: 129 KGFKINLLIGYGGRDDIIYAFKKFYAHAMKIGRRIA--VNEDVLRSSLRTYAVPDPDLVI 186
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE RLS FL WQ AYSE F +YWP+F + AL ++ R RR+G
Sbjct: 187 RTSGEMRLSGFLPWQTAYSELYFAEKYWPEFQIDDLKKALTEFQKRKRRYG 237
>gi|148926527|ref|ZP_01810209.1| putative undecaprenyl diphosphate synthase [Campylobacter jejuni
subsp. jejuni CG8486]
gi|205356324|ref|ZP_03223089.1| putative undecaprenyl diphosphate synthase [Campylobacter jejuni
subsp. jejuni CG8421]
gi|145845221|gb|EDK22315.1| putative undecaprenyl diphosphate synthase [Campylobacter jejuni
subsp. jejuni CG8486]
gi|205345709|gb|EDZ32347.1| putative undecaprenyl diphosphate synthase [Campylobacter jejuni
subsp. jejuni CG8421]
Length = 222
Score = 141 bits (356), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 126/226 (55%), Gaps = 11/226 (4%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ ++MDGN RWA A+G G+ +G++ +++ E I NL++FAFS NW+RP
Sbjct: 6 HLAVVMDGNRRWARAKGFLAKLGYSQGVKTMQKLMEVCMEENISNLSLFAFSTENWKRPK 65
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
EI + +L+ L + +KNN+++R IG+ L+D + + E++T+ L +
Sbjct: 66 DEIDFIFELLDRCLDEALEKFEKNNVRLRAIGDLSRLEDKVREKITLVEEKTKHCDALCV 125
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP-DPDLIIRTGGE 191
+A +Y +RDEI RA K + +++ + + L D+P D DL++R G
Sbjct: 126 NLAISYGARDEIIRAAKRAIEK-------KLELNEENLTQNL---DLPLDVDLMLRVGNA 175
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
KRLS+FLLWQ +Y+E F +P ++ F + ++ R+R FG
Sbjct: 176 KRLSNFLLWQCSYAEIYFSETLFPSLTKREFKRIIKEFRNRERTFG 221
>gi|23004445|ref|ZP_00047773.1| COG0020: Undecaprenyl pyrophosphate synthase [Magnetospirillum
magnetotacticum MS-1]
Length = 124
Score = 141 bits (356), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 63/120 (52%), Positives = 83/120 (69%)
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E +TR NTGL L +AFNY R EI RA++ I Q + G + ++ IA LDT+ +P
Sbjct: 1 ETRTRANTGLTLVVAFNYGGRQEILRAVRRIAQAVAEGRLRPEEIGLPTIADALDTAGIP 60
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GE+RLS+FL WQ AY+E+V P +WPDF F A+++Y+ RDRRFGGLS
Sbjct: 61 DPDLVIRTSGEQRLSNFLTWQTAYAEYVIEPGFWPDFDHAAFLAAVDEYHRRDRRFGGLS 120
>gi|326431644|gb|EGD77214.1| dehydrodolichyl diphosphate synthase [Salpingoeca sp. ATCC 50818]
Length = 331
Score = 141 bits (356), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 119/222 (53%), Gaps = 4/222 (1%)
Query: 1 MVASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
MV + + + P P H+ IMDGN RWA AGH G + + ++G+ +T
Sbjct: 8 MVGAAVKTGPVPQHVAFIMDGNRRWARRAKTETVAGHSMGFSTLKKTLEWCLDLGVHMVT 67
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCV 116
++AFS N++R E+ +L+KL + + + + + VRV+G+ L +
Sbjct: 68 VYAFSSENFKRSEKEVGDLMKLAEEKFIQLLNEEEMIHRLGVCVRVLGDVKRLPPSLQQA 127
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT 176
+ +A D ++ NT L + F Y++R+E++ A I Q ++ G + D+ L+ + L T
Sbjct: 128 IGKAVDISKDNTRAILNVCFVYTAREEMAMAAHEITQAVQEGELYESDITEHLVEQCLYT 187
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS 218
+ P P LIIR+ GE RLSDFLLWQ AY F P WPDFS
Sbjct: 188 NASPPPSLIIRSSGEVRLSDFLLWQGAYVHLAFSPVLWPDFS 229
>gi|242011401|ref|XP_002426439.1| Dehydrodolichyl diphosphate synthase, putative [Pediculus humanus
corporis]
gi|212510544|gb|EEB13701.1| Dehydrodolichyl diphosphate synthase, putative [Pediculus humanus
corporis]
Length = 290
Score = 141 bits (356), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 135/236 (57%), Gaps = 13/236 (5%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGN R+A + + GH +G + E++ ++GI +T++AFSI N++R
Sbjct: 26 PRHIAIIMDGNRRYANKNKVLKVEGHSRGFDKLTEVLRWCLDIGIIEVTVYAFSIENFKR 85
Query: 71 PVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
E+++++ L + +K L K + +RVIG+ L D+ ++ +A T+ N
Sbjct: 86 SEDEVNQIMNLARRKFEKLLEEKDKLIKEGVNIRVIGDLSLLPHDLFQLISKAVYLTKDN 145
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T + L +AF+Y+ ++EI +I+ I + ++ + D+ L+ K L + + PDL+IR
Sbjct: 146 TKVRLTVAFSYTGQNEICESIRCISKGVKEERLKLSDISMDLLGKSLYSENSDVPDLVIR 205
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS-----RELFFHA-----LNQYNLRD 233
T GE R+SDF+LWQ +YS + F WP+F+ + +FF+ LN+ ++D
Sbjct: 206 TSGEVRISDFMLWQSSYSCYYFTSILWPEFTFWELLKAIFFYQRSYKILNKLKIKD 261
>gi|332016625|gb|EGI57496.1| Dehydrodolichyl diphosphate synthase [Acromyrmex echinatior]
Length = 435
Score = 141 bits (355), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 82/213 (38%), Positives = 118/213 (55%), Gaps = 3/213 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I DGN R+A L R G+ KG+ N I+ +GI TI+ FSI N++R
Sbjct: 2 PKHVAFITDGNRRYANKYNLSRREGYLKGLNKINNILNWCMHLGIVETTIYLFSITNFKR 61
Query: 71 PVSEISELVKLIKSFLK---KGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
EI L+ +IK K + LK N I VRVIGN L +D+ ++ E T N
Sbjct: 62 SKKEIDNLMDIIKQLFKSLLENKEKLKDNGICVRVIGNLSLLSEDLNKLIAEVMIVTGEN 121
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+ + A Y+SRDEI+ AIK+I Q +++ + D++ LI L T P+PDL+IR
Sbjct: 122 NRIFINFAVAYTSRDEITHAIKDIIQGVKNTDILPEDINEDLITDCLYTYKSPNPDLLIR 181
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRE 220
T GE RLSDFL+WQ++ + F ++ SR+
Sbjct: 182 TSGENRLSDFLMWQISSTCIYFAKTFYRCDSRD 214
>gi|237750995|ref|ZP_04581475.1| undecaprenyl diphosphate synthase [Helicobacter bilis ATCC 43879]
gi|229373440|gb|EEO23831.1| undecaprenyl diphosphate synthase [Helicobacter bilis ATCC 43879]
Length = 222
Score = 141 bits (355), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 120/225 (53%), Gaps = 9/225 (4%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ ++MDGN RWA G+ G+ G +++ E GIK+LT+FAFS NW+RP
Sbjct: 6 HLAVVMDGNRRWARKNGILEKIGYLHGANTIQKVIEVCIEEGIKHLTLFAFSTENWQRPQ 65
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
EI L KL+K +L + N+++ R IG L D+ + E+QT+ L +
Sbjct: 66 EEIDYLFKLLKKYLDESLERFLSNDVRFRAIGQLDKLSQDLRKDIANFEEQTKHCKTLCV 125
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A +Y ++DEI RA+K + ++ I+ LD S+ D DL++R G
Sbjct: 126 NVAISYGAKDEIVRAVKRVVDK-------KLEITEENISANLDISE--DVDLLLRVGSAS 176
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
R+S+FLLWQ AY+E F +P +++ ++ + R+R FG
Sbjct: 177 RISNFLLWQCAYAEIFFSKTLFPGLTKKECKRIIDDFKQRERTFG 221
>gi|296140818|ref|YP_003648061.1| undecaprenyl diphosphate synthase [Tsukamurella paurometabola DSM
20162]
gi|296028952|gb|ADG79722.1| undecaprenyl diphosphate synthase [Tsukamurella paurometabola DSM
20162]
Length = 281
Score = 141 bits (355), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 124/233 (53%), Gaps = 7/233 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ ++ DGN RWA A G + G+R G + E++ E G++ TI+ S N R
Sbjct: 51 PRHVAVLCDGNRRWARAAGFDDVSHGYRMGAKKIAEMLEWCDEAGVELATIYLLSTENLR 110
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E++ L+++I +++ S N V+++G L + L A + T+ TG
Sbjct: 111 RDPEELAALLEIITDVVEE--ISGPDKNWSVKIVGAMDLLPEAAARRLTAAAEGTKGRTG 168
Query: 130 LNLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDSSLIA---KYLDTSDVPDPDLI 185
++ +A Y R EI A+ ++ + + G+ D+ + ++L TS PDPDL+
Sbjct: 169 AHVNVAVGYGGRKEIVDAVHSLLDEKLREGASAEELADAVTVEGIDQHLYTSGQPDPDLV 228
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
IRT GE+RLS FLLWQ AYSE F YWP+F R F AL Y R RRFG
Sbjct: 229 IRTSGEQRLSGFLLWQSAYSEIWFTEAYWPEFRRVDFLRALRDYAARHRRFGA 281
>gi|294656760|ref|XP_459077.2| DEHA2D13794p [Debaryomyces hansenii CBS767]
gi|199431722|emb|CAG87245.2| DEHA2D13794p [Debaryomyces hansenii]
Length = 347
Score = 141 bits (355), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 83/220 (37%), Positives = 128/220 (58%), Gaps = 11/220 (5%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P H+G+IMDGN R+A + GH G E I+ E G++ T++AFS
Sbjct: 26 IQTGPTPRHVGMIMDGNRRYAKTHKIELKEGHNMGFESMANILELLYESGVECATVYAFS 85
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R E++ L+ L KS K+ + ++ IK++++G+ L D+ +LKE E
Sbjct: 86 IENFKRSSYEVNWLMDLAKSKFKQISQNGELCEQYGIKIKILGSTELLPPDVYTILKETE 145
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD--VDSSLIAKYLDTSDV 179
+ T+ NT L I F Y+SRDEI+ IKNI + SV ++D VD + + ++L TS+
Sbjct: 146 EITKDNTRAVLNICFPYTSRDEITSTIKNIVNE----SVQNNDFVVDENTVDRFLYTSNS 201
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYS--EFVFIPEYWPDF 217
P D+++RT G RLSDFLLWQ S VF+ + WP+F
Sbjct: 202 PPLDILLRTSGTFRLSDFLLWQCVSSSCSIVFVDKLWPEF 241
>gi|268324172|emb|CBH37760.1| undecaprenyl pyrophosphate synthetase [uncultured archaeon]
Length = 322
Score = 141 bits (355), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 130/247 (52%), Gaps = 14/247 (5%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+V + SPP+H+ IIMDGN R+A G+ G+ G E+ +++ E G+K LTI
Sbjct: 35 LVDEVRERSPPEHVAIIMDGNRRYAKKIGVSTEEGYLYGAEITEQVIEWCFEAGVKQLTI 94
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFSI N+ R E L KL++ +K + K ++V+ IGN L D + ++
Sbjct: 95 YAFSIENFCRSAEEKERLFKLMRVEFEKISKDERVHKRGVRVKAIGNLNLLPDSVKEAIQ 154
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
+AE +T LF+A YS R EI +++ I ++ GS+ ++D I+K+L S+
Sbjct: 155 KAEQETAHYNSFKLFVAVAYSGRMEIVDSVRIIADRVKRGSLSVDEIDEETISKHLYISE 214
Query: 179 V----------PDPDLIIRTGGEKRLSDFLLWQVAYSEFV--FIPEYWPDFSRELFFHAL 226
+ DLIIRTGGE RLS+F+ WQ +E F +WP+F + A+
Sbjct: 215 IEAGDSDSGAKTGVDLIIRTGGEMRLSNFVPWQALGNECAAYFCAPFWPEFRKIDLLRAI 274
Query: 227 NQYNLRD 233
Y R+
Sbjct: 275 RTYQERE 281
>gi|300781598|ref|ZP_07091452.1| Di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
genitalium ATCC 33030]
gi|300533305|gb|EFK54366.1| Di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
genitalium ATCC 33030]
Length = 259
Score = 141 bits (355), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 123/239 (51%), Gaps = 9/239 (3%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P HI ++ DGN RWA G A GHR G E+VA +AE+ + +TI+
Sbjct: 23 LQGKNQPKHIAVMADGNRRWAREAGFTDIAHGHRVGAAKIAELVAWSAEMNVDVVTIYLL 82
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S N R E+ L +I + + + ++R++G+ L + + ++ A
Sbjct: 83 STENLSRTAEEVQLLYDIISGVVDE--LCSDEFEARIRLVGHLDLLPEKVSQRMRSAAAA 140
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIF-----QDIESGSVCSHDVDSSLIAKYLDTSD 178
T G+ + IA Y R EI A+++ + + + + H V ++++L TS
Sbjct: 141 TEAKNGIVVNIAVGYGGRQEIVDAVQHFIRAKVDEGVPAAELADH-VSVESLSEHLYTSG 199
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDPDL+IRT GE+RLS FLLWQ AYSE F YWP F + F AL Y+ R RRFG
Sbjct: 200 QPDPDLVIRTSGEQRLSGFLLWQSAYSEIWFTDTYWPAFRKIDFLRALRDYSQRSRRFG 258
>gi|145222643|ref|YP_001133321.1| undecaprenyl diphosphate synthase [Mycobacterium gilvum PYR-GCK]
gi|315443107|ref|YP_004075986.1| undecaprenyl pyrophosphate synthetase [Mycobacterium sp. Spyr1]
gi|145215129|gb|ABP44533.1| Undecaprenyl pyrophosphate synthetase [Mycobacterium gilvum
PYR-GCK]
gi|315261410|gb|ADT98151.1| Undecaprenyl pyrophosphate synthetase [Mycobacterium sp. Spyr1]
Length = 263
Score = 141 bits (355), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 129/240 (53%), Gaps = 8/240 (3%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
S+ S P HI ++ DGN RWA G A G+R G E++ E GI+ T++
Sbjct: 25 SVKRSELPRHIAVLCDGNRRWARETGHDDVAYGYRVGAGKIAEMLRWCQEAGIEMATVYL 84
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
S N +R E+S L+++I +++ N VR +G+ + +D L++A
Sbjct: 85 LSTENLQREPEELSCLIEIITEVVEE--ICAPANQWSVRTVGDLELIGEDQARRLRDAVS 142
Query: 123 QTRLNTG-LNLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDS---SLIAKYLDTS 177
T N G ++ +A Y R EI A++ + +++ +G+ V++ I++ L TS
Sbjct: 143 STDGNGGAFHVNVAVGYGGRQEIVDAVRALLSKELANGATGDQLVEAVTAEAISENLYTS 202
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDPDL+IRT GE+RLS FLLWQ AYSE F YWP+F R F AL Y+ R RR+G
Sbjct: 203 GQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAYWPEFRRVDFLRALRDYSARHRRYG 262
>gi|327187688|dbj|BAK09179.1| Z-prenyltransferase 1 [Mycobacterium chlorophenolicum]
Length = 282
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/240 (35%), Positives = 125/240 (52%), Gaps = 8/240 (3%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
S S P HI ++ DGN RWA G A G+R G E++ A+ GI+ T++
Sbjct: 44 SRQKSELPRHIAVLCDGNRRWARELGHDDVAYGYRAGAHKIAEMLRWCADAGIEMATVYP 103
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
S N +R E++ L+++I +++ N VR +G+ + ++ L+EA
Sbjct: 104 LSTENLQRDPDELASLIEIITDVVEE--ICAPANQWSVRTVGDLELIGEEPARRLREAVQ 161
Query: 123 QTRLNTG-LNLFIAFNYSSRDEISRAIKNIFQ----DIESGSVCSHDVDSSLIAKYLDTS 177
T N G ++ +A Y R EI A++ + + +G V + I++ L TS
Sbjct: 162 STDGNGGAFHVNVAVGYGGRQEIVDAVRALLSKELANGPTGDQLIEAVTAEAISENLYTS 221
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDPDL+IRT GE+RLS FLLWQ AYSE F YWP+F R F AL Y+ R RR+G
Sbjct: 222 GQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAYWPEFRRVDFLRALRDYSARHRRYG 281
>gi|326405216|ref|YP_004285298.1| undecaprenyl pyrophosphate synthetase [Acidiphilium multivorum
AIU301]
gi|325052078|dbj|BAJ82416.1| undecaprenyl pyrophosphate synthetase [Acidiphilium multivorum
AIU301]
Length = 283
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 130/244 (53%), Gaps = 8/244 (3%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAG-HRKGIEVFNEIVAAAAEVGIKNLT 59
+A +++ P P H+GII+DGN R A GL +R G +EI+A +AE+GI +T
Sbjct: 39 LAREVAAGPLPHHVGIILDGNRRHARLAGLSDPGEIYRLGAAKLDEILAWSAELGIPMIT 98
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
++ FS N RP +E+ ++ +++ ++ ++ +++ IG R L +L +
Sbjct: 99 LWVFSPANLGRPEAEVGGILGAVEAKMRALVADPHIRSRGVRLAAIGRRDILPPALLAAI 158
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKY 173
AED T N G+ + +A Y R+EI+ A++ + + + V I ++
Sbjct: 159 DAAEDATSGNDGMTVTLAIGYGGREEIADAVRALLAECAGAGMDCAAAAAAVSPEAIRRH 218
Query: 174 LDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
L +PDPDLIIRT GE RLS F+LWQ +SE F WP F R + A+ + RD
Sbjct: 219 LYLGGMPDPDLIIRTSGEIRLSGFMLWQSVHSELHFCDATWPAFRRIDYLRAIRAFQRRD 278
Query: 234 RRFG 237
RRFG
Sbjct: 279 RRFG 282
>gi|288932337|ref|YP_003436397.1| undecaprenyl diphosphate synthase [Ferroglobus placidus DSM 10642]
gi|288894585|gb|ADC66122.1| undecaprenyl diphosphate synthase [Ferroglobus placidus DSM 10642]
Length = 251
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/228 (36%), Positives = 125/228 (54%), Gaps = 4/228 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGN R+A RGLP GH G + +++ E+GIK LT+FAFS N++R
Sbjct: 20 PNHIAIIMDGNRRYARKRGLPPQMGHFFGSKKAEKVLEWCYELGIKTLTVFAFSTENFKR 79
Query: 71 PVSEISELVKLIKS--FLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
E L +LI+ F + +N +KVR+IG + L +L E +T+
Sbjct: 80 NEEEKRNLFQLIRRELFRLAEDKRIHRNRVKVRIIGKKELLPKYVLEAASFVEKRTKEYD 139
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
L IA Y +R EI+ A++ + + + +G V + ++D +I + L ++P D+IIRT
Sbjct: 140 NFRLNIAIAYGARQEIAEAVRKVLEKVLNGEVKAEEIDLKMIEENL-YENMP-VDIIIRT 197
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
G E RLS+FL+WQ A F YWP+F R A+ + R R+
Sbjct: 198 GKEMRLSNFLIWQSASKYAYFCDVYWPEFRRIDLLRAIRSWQKRVERW 245
>gi|167042193|gb|ABZ06926.1| putative undecaprenyl diphosphate synthase [uncultured marine
crenarchaeote HF4000_ANIW93H17]
Length = 263
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 126/231 (54%), Gaps = 4/231 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI I++DGN RWA + + GH KG + ++ E IK +T++ S N R
Sbjct: 32 PNHIAIVLDGNRRWAKRNLVMQTHGHFKGADAVENLLDWCEEFDIKIITLYVLSAENLDR 91
Query: 71 PVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
E+ + LIK+ L+K + + KN ++V+ IG L D I VL ++ T+ +
Sbjct: 92 KNEELDYIYDLIKTRLEKLYNDPRIHKNEMRVKGIGRIELLPDSIKDVLSRLDNATKDYS 151
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP--DLII 186
L IA Y ++E+ A++ I I+ G + D+ +I + L TS +P P D+I+
Sbjct: 152 NHFLNIAIAYGGQNELVDAVRKIGTKIKEGKLDVKDITKDVIEENLYTSHLPQPSADMIL 211
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GEKR+S FL+WQ AYSE VF+ +WP+F + A+ + R RR G
Sbjct: 212 RTSGEKRMSGFLMWQSAYSELVFLDVFWPEFRKIDLMRAIRTFQKRKRRTG 262
>gi|15828335|ref|NP_302598.1| undecaprenyl pyrophosphate synthetase [Mycobacterium leprae TN]
gi|221230812|ref|YP_002504228.1| putative undecaprenyl pyrophosphate synthetase [Mycobacterium
leprae Br4923]
gi|44888532|sp|Q9CB36|ZFPP_MYCLE RecName: Full=Short-chain Z-isoprenyl diphosphate synthase;
AltName: Full=(2Z,6E)-farnesyl diphosphate synthase;
AltName: Full=Z-FPP synthase; AltName: Full=Z-isoprenyl
diphosphate synthase
gi|13094028|emb|CAC31984.1| possible undecaprenyl pyrophosphate synthetase [Mycobacterium
leprae]
gi|219933919|emb|CAR72566.1| possible undecaprenyl pyrophosphate synthetase [Mycobacterium
leprae Br4923]
Length = 262
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 125/232 (53%), Gaps = 7/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI ++ DGN RWA G + G+R G E++ E GI+ T++ S N +
Sbjct: 32 PRHIAVLCDGNRRWARDAGYDDVSYGYRMGAAKIAEMLRWCQEAGIEMTTVYLLSTENLQ 91
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E++ L+++I +++ N VR +G+ L ++ C L+ A + T
Sbjct: 92 RDPDELAALIEIITDVVEE--ICAPANRWSVRTVGDLELLGEEPACRLRGAVESTPGVAP 149
Query: 130 LNLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDSSL---IAKYLDTSDVPDPDLI 185
++ +A Y R EI A++ + +++ +G+ V++ IA+ L TS PDPDL+
Sbjct: 150 FHVNVAVGYGGRREIVGAVRALLGKELANGATAEELVEAVTVEGIARNLYTSGQPDPDLV 209
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRT GE+RLS FLLWQ AYSE F +WP F R F AL Y++R RR+G
Sbjct: 210 IRTSGEQRLSGFLLWQSAYSEMWFTETHWPAFRRVDFLRALRDYSMRHRRYG 261
>gi|237785176|ref|YP_002905881.1| Undecaprenyl pyrophosphate synthase [Corynebacterium kroppenstedtii
DSM 44385]
gi|237758088|gb|ACR17338.1| Undecaprenyl pyrophosphate synthase [Corynebacterium kroppenstedtii
DSM 44385]
Length = 326
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/276 (33%), Positives = 137/276 (49%), Gaps = 41/276 (14%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLT 59
+V ++ P HI ++ DGN RWA G + GHR G + +E+V + E G++ +T
Sbjct: 52 LVRALQGKPVPRHIAVMCDGNRRWAREAGFIDVSHGHRVGAKKISELVQWSGERGVELVT 111
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
I+ S N R +E+ L ++I + + K N ++RV+G+R L D + L
Sbjct: 112 IYLLSTENLHRDKAELELLYRIIGDVSDE--LAKSKLNARLRVVGHRDILPDALTDRLAA 169
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI---------ESGSV---CSHDVDS 167
E T +TG+ + +A Y R EI A++++ +D ES + +H VDS
Sbjct: 170 NEKATADHTGVCVNMAVGYGGRQEIVDAVRSLLEDRVKEKHEASRESSAKDDEGAHQVDS 229
Query: 168 SL--------------------------IAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQ 201
+ I+ +L TS PDPDL+IRT GE+RLS FLLWQ
Sbjct: 230 ASSSKASELGDDQRFSLDDIAEAITVQGISDHLYTSGQPDPDLVIRTSGEQRLSGFLLWQ 289
Query: 202 VAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
AYSE F YWP F R F AL ++ R+RRFG
Sbjct: 290 SAYSEIWFTDTYWPAFRRVDFLRALRDFSRRNRRFG 325
>gi|294495894|ref|YP_003542387.1| undecaprenyl pyrophosphate synthetase [Methanohalophilus mahii DSM
5219]
gi|292666893|gb|ADE36742.1| Undecaprenyl pyrophosphate synthetase [Methanohalophilus mahii DSM
5219]
Length = 295
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 131/235 (55%), Gaps = 7/235 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ +S P HI IIMDGN R+A G GH +G ++ +++ + E GIK LTI+AFS
Sbjct: 21 IRNSKLPQHIAIIMDGNRRYAKKLGKFTSYGHTRGADITEKVIEWSYENGIKELTIYAFS 80
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLK--KNNIKVRVIGNRLSLDDDILCVLKEAED 122
N+ R E ++KLI + L++ + K +KVR+IG+R L D+L + + E
Sbjct: 81 TENFSRKKDEKKSILKLIGTRLEEMCVDERTHKRRLKVRIIGDRDLLPGDLLQSIDKVEM 140
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYL---DTSDV 179
T+ L L IA Y R +I +AI+ + + ++ G + + ++ I+++L + S V
Sbjct: 141 ATKDYDSLKLNIAIAYGGRQDIIQAIREVARKVKVGDIKTGEITEKTISRHLYPEENSPV 200
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFV--FIPEYWPDFSRELFFHALNQYNLR 232
+ DLIIRTGG +R+S+FL WQ +E F YWPDF + F ++ Y R
Sbjct: 201 SNVDLIIRTGGNERVSNFLPWQACGNECAAYFCAPYWPDFRKIDFLRSIRTYQQR 255
>gi|227828237|ref|YP_002830017.1| undecaprenyl diphosphate synthase [Sulfolobus islandicus M.14.25]
gi|227830995|ref|YP_002832775.1| undecaprenyl diphosphate synthase [Sulfolobus islandicus L.S.2.15]
gi|229579875|ref|YP_002838274.1| undecaprenyl diphosphate synthase [Sulfolobus islandicus Y.G.57.14]
gi|229581466|ref|YP_002839865.1| undecaprenyl diphosphate synthase [Sulfolobus islandicus Y.N.15.51]
gi|229585465|ref|YP_002843967.1| undecaprenyl diphosphate synthase [Sulfolobus islandicus M.16.27]
gi|238620429|ref|YP_002915255.1| undecaprenyl diphosphate synthase [Sulfolobus islandicus M.16.4]
gi|284998487|ref|YP_003420255.1| undecaprenyl diphosphate synthase [Sulfolobus islandicus L.D.8.5]
gi|227457443|gb|ACP36130.1| undecaprenyl diphosphate synthase [Sulfolobus islandicus L.S.2.15]
gi|227460033|gb|ACP38719.1| undecaprenyl diphosphate synthase [Sulfolobus islandicus M.14.25]
gi|228010590|gb|ACP46352.1| undecaprenyl diphosphate synthase [Sulfolobus islandicus Y.G.57.14]
gi|228012182|gb|ACP47943.1| undecaprenyl diphosphate synthase [Sulfolobus islandicus Y.N.15.51]
gi|228020515|gb|ACP55922.1| undecaprenyl diphosphate synthase [Sulfolobus islandicus M.16.27]
gi|238381499|gb|ACR42587.1| undecaprenyl diphosphate synthase [Sulfolobus islandicus M.16.4]
gi|284446383|gb|ADB87885.1| undecaprenyl diphosphate synthase [Sulfolobus islandicus L.D.8.5]
gi|323475304|gb|ADX85910.1| undecaprenyl diphosphate synthase [Sulfolobus islandicus REY15A]
gi|323478030|gb|ADX83268.1| undecaprenyl diphosphate synthase [Sulfolobus islandicus HVE10/4]
Length = 262
Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 129/246 (52%), Gaps = 12/246 (4%)
Query: 1 MVASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
++ + + + P PDH+GII DGN RWA L + G + E++ E+G+KN+T
Sbjct: 21 LLWNQIRNGPLPDHVGIIPDGNRRWARNNNLSLNDAYFYGYKKLKEVLIWLLELGVKNIT 80
Query: 60 IFAFSINNW-RRPVSEISELVKLIKSFLKKGFYSLKKN------NIKVRVIGNRLSLDDD 112
+FA S N +R SE+S ++ +++K+G L ++ +KV IG L D
Sbjct: 81 VFALSTENCEKRKQSELS----IVTTYIKRGLQELLEDPIVDRYEVKVSAIGKLDKLPKD 136
Query: 113 ILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAK 172
+ L + ++T L +A Y R EI A+ + D +G + ++++ K
Sbjct: 137 LTDYLNKVIEKTSNYDKRKLTLAICYGGRQEILDAVVRLLDDYRNGKISKNEINEETFRK 196
Query: 173 YLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLR 232
Y S++ D DL+IRT GE R+S+FLLW VAYSE F YWP+F + + A+ + R
Sbjct: 197 YFYDSELHDIDLVIRTSGEVRISNFLLWHVAYSELFFCEAYWPEFRKIDLWRAIRSFQKR 256
Query: 233 DRRFGG 238
R FG
Sbjct: 257 KRNFGA 262
>gi|148261723|ref|YP_001235850.1| undecaprenyl diphosphate synthase [Acidiphilium cryptum JF-5]
gi|146403404|gb|ABQ31931.1| Undecaprenyl pyrophosphate synthetase [Acidiphilium cryptum JF-5]
Length = 283
Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 130/244 (53%), Gaps = 8/244 (3%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAG-HRKGIEVFNEIVAAAAEVGIKNLT 59
+A +++ P P H+GII+DGN R A GL +R G +EI+A +AE+GI +T
Sbjct: 39 LAREVAAGPLPRHVGIILDGNRRHARLAGLSDPGEIYRLGAAKLDEILAWSAELGIPMIT 98
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
++ FS N RP +E+ ++ +++ ++ ++ +++ IG R L +L +
Sbjct: 99 LWVFSPANLGRPEAEVGGILGAVEAKMRALVADPHIRSRGVRLAAIGRRDILPPALLAAI 158
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKY 173
AED T N G+ + +A Y R+EI+ A++ + + + V I ++
Sbjct: 159 DAAEDATSGNDGMTVTLAIGYGGREEIADAVRALLAECAGAGMDCAAAAAAVSPEAIRRH 218
Query: 174 LDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
L +PDPDLIIRT GE RLS F+LWQ +SE F WP F R + A+ + RD
Sbjct: 219 LYLGGMPDPDLIIRTSGEIRLSGFMLWQSVHSELHFCDATWPAFRRIDYLRAIRAFQRRD 278
Query: 234 RRFG 237
RRFG
Sbjct: 279 RRFG 282
>gi|167044307|gb|ABZ08986.1| putative undecaprenyl diphosphate synthase [uncultured marine
crenarchaeote HF4000_APKG6B14]
Length = 263
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 126/231 (54%), Gaps = 4/231 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI I++DGN RWA + + GH KG + ++ E IK +T++ S N R
Sbjct: 32 PNHIAIVLDGNRRWAKRNLVMQTHGHFKGADAVENLLDWCEEFDIKIITLYVLSAENLDR 91
Query: 71 PVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
E+ + LIK+ L+K + + KN ++V+ IG L D I VL ++ T+ +
Sbjct: 92 KNEELDYIYDLIKTRLEKLYNDPRIHKNEMRVKGIGRIELLPDSIKDVLSRLDNATKDYS 151
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP--DLII 186
L IA Y ++E+ A++ I I+ G + D+ +I + L TS +P P D+I+
Sbjct: 152 NHFLNIAIAYGGQNELVDAVRKIGTKIKEGKLDVKDITKDVIEENLYTSHLPQPSADMIL 211
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GEKR+S FL+WQ AYSE VF+ +WP+F + A+ + R RR G
Sbjct: 212 RTSGEKRMSGFLMWQSAYSELVFLDVFWPEFRKIDLMRAIRTFQKRKRRAG 262
>gi|196005207|ref|XP_002112470.1| hypothetical protein TRIADDRAFT_56521 [Trichoplax adhaerens]
gi|190584511|gb|EDV24580.1| hypothetical protein TRIADDRAFT_56521 [Trichoplax adhaerens]
Length = 344
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 115/211 (54%), Gaps = 3/211 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IMDGN R+A R GH G + E + ++GIK +T++AFSI N++R
Sbjct: 42 PKHVAFIMDGNRRYALKMNYSRIIGHSMGFDKLAETLEWCLDLGIKEVTVYAFSIENFKR 101
Query: 71 PVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
E+ +L+KL K + + K+ I +R+ G+ L D+ + +R N
Sbjct: 102 SKKEVEDLMKLAKGKFDRLLLERDKIDKHGICIRIFGDISLLPPDVQVAVANTVKISRHN 161
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L + Y++R+E++ A+K + +E+ + D+ L+ K + T + PDLIIR
Sbjct: 162 NRAFLNVCLAYTARNEMTNAMKELAIGVENQMLRPSDICEDLLEKCMYTGEATQPDLIIR 221
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS 218
T GE RLSDFLLWQ AYS F+ YWP+F+
Sbjct: 222 TSGEVRLSDFLLWQSAYSCLTFLDVYWPEFT 252
>gi|219116104|ref|XP_002178847.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409614|gb|EEC49545.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 247
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 119/240 (49%), Gaps = 19/240 (7%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI ++MDGN R+ R +GH G E I LT++AFS NWRR
Sbjct: 13 PQHIAVVMDGNRRYGTLRYGKATSGHWDGSRKVLECAKWCLAEHIPVLTVYAFSTENWRR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNR------------LSLDDDILCVLK 118
E++ L+ L ++ ++ + NI+VRV+ L L+ D
Sbjct: 73 DPQEVATLMSLFVTYCEELRVEAIQRNIRVRVVSTEHDPIPPPVRAGLLRLEHDTRHCAA 132
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
E D GL + I +Y SR EI +A + + + G++ D+ S + + L TS
Sbjct: 133 EGTD------GLQMNILLSYGSRGEIVQACQALASECLHGNLALQDISESHLQQRLLTSH 186
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL-RDRRFG 237
VPDPD++IRT GE RLS+FLLWQ+AY+E F+ + WP+ + + Y R RR+G
Sbjct: 187 VPDPDVVIRTSGEFRLSNFLLWQIAYAELFFLEKNWPELQKADLVEIIRSYAAKRQRRYG 246
>gi|145354782|ref|XP_001421655.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581893|gb|ABO99948.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 311
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 133/243 (54%), Gaps = 15/243 (6%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+A + + P P H+ +IMDGN R+A A G+ GH +G +V E A E+G++ L++
Sbjct: 28 IARALRAGPIPRHVAVIMDGNRRFACASGVALARGHARGADVLREACAWCFELGVETLSV 87
Query: 61 FAFSINNWRRPVSEISELVKL----IKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCV 116
+A S N++R E+ L L I + + L+ +V V G+ +L +
Sbjct: 88 YALSTENFKRSERELEALFDLACGEIGTLIDD--EGLRLREARVHVSGDLDALPKRVRDK 145
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT 176
KEA ++T+ N G L + Y+ R++I+RA+ +D+ G++ + +VD +A L
Sbjct: 146 AKEAMEKTKDNRGPMLNVCMAYTGREDIARAVMKTREDVRGGALDASEVDERAVASRLHG 205
Query: 177 SD--------VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQ 228
++ +P+ DL++RT GE RLSDF+L+ +++ VF+ WPDF+ F HA+ Q
Sbjct: 206 AEREIELGAGMPEVDLLVRTSGETRLSDFMLFNARFAKLVFVEVLWPDFTFMDFVHAVWQ 265
Query: 229 YNL 231
Y L
Sbjct: 266 YQL 268
>gi|306817611|ref|ZP_07451354.1| undecaprenyl diphosphate synthase [Mobiluncus mulieris ATCC 35239]
gi|304649653|gb|EFM46935.1| undecaprenyl diphosphate synthase [Mobiluncus mulieris ATCC 35239]
Length = 258
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 119/235 (50%), Gaps = 16/235 (6%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGII+DGN RWA A G P GH++G E++ ++ +T++ SI+N +R
Sbjct: 31 PAHIGIILDGNRRWARAEGAPDVKGHQRGALKIREVLEWCEAWPVRVVTLWMLSIDNLQR 90
Query: 71 PVSEISELV----KLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
+E+ L K ++ + G Y L RV+G+ SL D L + A +T
Sbjct: 91 DATELEPLQDTIGKTVQRLQRAGKYRL-------RVLGD-TSLIDPKLAEILAAAHETGP 142
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDVPDP 182
+ + IA Y R EI A+K + + V+ + I +L T PDP
Sbjct: 143 AEAMVVNIAVAYGGRQEIVAAVKEYLHEQAAAGRGLAQVEREITLEDIEAHLYTKGQPDP 202
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRT GE+RLS FLLWQ A SEF F YWP F F AL Y+ R+RR G
Sbjct: 203 DLVIRTSGEQRLSGFLLWQSANSEFYFCETYWPSFRHIDFLRALRDYSSRERRNG 257
>gi|118468157|ref|YP_889502.1| undecaprenyl diphosphate synthase [Mycobacterium smegmatis str. MC2
155]
gi|118169444|gb|ABK70340.1| undecaprenyl diphosphate synthase [Mycobacterium smegmatis str. MC2
155]
Length = 263
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 124/233 (53%), Gaps = 8/233 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI ++ DGN RWA G + G+RKG E++ GI+ TI+ S N +
Sbjct: 32 PRHIAVLCDGNRRWARDAGYDDVSIGYRKGAAKIAEMLRWCQAAGIEMATIYLLSTENLQ 91
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA-EDQTRLNT 128
R E++ L+++I +++ N VR +G+ L D+ L+EA E T
Sbjct: 92 RDPDELTALIEIITDVVEE--ICAPYNKWSVRTVGDLELLGDEPARRLREAVESTTTKGA 149
Query: 129 GLNLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDSSL---IAKYLDTSDVPDPDL 184
++ +A Y R EI A++++ +++ +G+ +++ I++ L TS PDPDL
Sbjct: 150 NFHVNVAVAYGGRQEIVDAVRSLLSKELANGATAEQLIEAVTVDGISENLYTSGQPDPDL 209
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+IRT GE+RLS FLLWQ AYSE F YWP F R F AL Y R RRFG
Sbjct: 210 VIRTSGEQRLSGFLLWQSAYSEMWFTEAYWPAFRRVDFLRALRDYTARHRRFG 262
>gi|15897113|ref|NP_341718.1| undecaprenyl diphosphate synthase [Sulfolobus solfataricus P2]
gi|284174354|ref|ZP_06388323.1| undecaprenyl diphosphate synthase [Sulfolobus solfataricus 98/2]
gi|41018477|sp|Q980W4|UPPS_SULSO RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|13813292|gb|AAK40508.1| Undecaprenyl diphosphate synthase [Sulfolobus solfataricus P2]
gi|22212911|tpg|DAA00056.1| TPA_exp: undecaprenyl diphosphate synthase [Sulfolobus
solfataricus]
gi|261601775|gb|ACX91378.1| undecaprenyl diphosphate synthase [Sulfolobus solfataricus 98/2]
Length = 262
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 120/235 (51%), Gaps = 11/235 (4%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW-R 69
PDH+GII DGN RWA L + G + E++ E+GIKN+T+F S N +
Sbjct: 32 PDHVGIIPDGNRRWARDNNLSLNDAYFYGYKKLKEVLIWLLELGIKNITVFVLSTENCDK 91
Query: 70 RPVSEISELVKLIKSFLKKGFYSL------KKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
R +E+S +I +++K+G L K +KV IG L D++ L ++
Sbjct: 92 RKQNELS----IITTYIKRGIQDLLEDPIVDKYEVKVSAIGKLDKLPKDLIDYLNRVVEK 147
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T L +A Y R EI A+ + D +G + +++ KY S++ D D
Sbjct: 148 TSNYDKRKLTLAICYGGRQEILDAVVRLLDDYRNGKIVKSEINEETFRKYFYDSELQDID 207
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L+IRT GE R+S+FLLW VAYSE F YWP+F + + A+ + R R FG
Sbjct: 208 LVIRTSGEVRISNFLLWHVAYSELFFCEAYWPEFRKIDLWRAIRSFQKRKRNFGA 262
>gi|227876661|ref|ZP_03994770.1| undecaprenyl pyrophosphate synthetase [Mobiluncus mulieris ATCC
35243]
gi|307699880|ref|ZP_07636931.1| putative di-trans,poly-cis-decaprenylcistransferase [Mobiluncus
mulieris FB024-16]
gi|227842558|gb|EEJ52758.1| undecaprenyl pyrophosphate synthetase [Mobiluncus mulieris ATCC
35243]
gi|307614918|gb|EFN94136.1| putative di-trans,poly-cis-decaprenylcistransferase [Mobiluncus
mulieris FB024-16]
Length = 258
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 119/235 (50%), Gaps = 16/235 (6%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGII+DGN RWA A G P GH++G E++ ++ +T++ SI+N +R
Sbjct: 31 PAHIGIILDGNRRWARAEGAPDVKGHQRGALKIREVLEWCEAWPVRVVTLWMLSIDNLQR 90
Query: 71 PVSEISELV----KLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
+E+ L K ++ + G Y L RV+G+ SL D L + A +T
Sbjct: 91 DAAELEPLQDTIGKTVQRLQRAGKYRL-------RVLGD-TSLIDPKLAEILAAAHETGP 142
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDVPDP 182
+ + IA Y R EI A+K + + V+ + I +L T PDP
Sbjct: 143 AEAMVVNIAVAYGGRQEIVAAVKEYLHEQAAAGRGLAQVEREITLEDIEAHLYTKGQPDP 202
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRT GE+RLS FLLWQ A SEF F YWP F F AL Y+ R+RR G
Sbjct: 203 DLVIRTSGEQRLSGFLLWQSANSEFYFCETYWPSFRHIDFLRALRDYSSRERRNG 257
>gi|227487838|ref|ZP_03918154.1| undecaprenyl pyrophosphate synthetase [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227542478|ref|ZP_03972527.1| undecaprenyl pyrophosphate synthetase [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227092165|gb|EEI27477.1| undecaprenyl pyrophosphate synthetase [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227181676|gb|EEI62648.1| undecaprenyl pyrophosphate synthetase [Corynebacterium
glucuronolyticum ATCC 51866]
Length = 256
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 123/232 (53%), Gaps = 7/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ ++ DGN RWA G + GHR G + E++ + ++ +T++ S N +
Sbjct: 26 PRHVAVMCDGNRRWAREAGFADVSHGHRVGAKKIGELIRWCEDTKVEIVTVYLLSTENLK 85
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ L +I + + S N ++R++G+ L + I + +T +TG
Sbjct: 86 RSSEEVGLLFDIIADVVDE--LSATDLNCRIRLVGHMDLLPEKISTRMARGAAKTADHTG 143
Query: 130 LNLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDSSLI---AKYLDTSDVPDPDLI 185
+ + IA Y R EI A++ + ++ E G+ D+ I +++L T D PDPDL+
Sbjct: 144 VVVNIAVGYGGRQEIVDAVQALVNEEAEKGTPADKIADAVTIESLSRHLYTRDQPDPDLV 203
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRT GE+RLS FLLWQ AYSE F YWP F R F AL ++ R RRFG
Sbjct: 204 IRTSGEQRLSGFLLWQAAYSEIWFTDTYWPAFRRIDFLRALRDFSSRSRRFG 255
>gi|26554404|ref|NP_758338.1| undecaprenyl diphosphate synthase [Mycoplasma penetrans HF-2]
gi|26454414|dbj|BAC44742.1| undecaprenyl diphosphate synthase [Mycoplasma penetrans HF-2]
Length = 225
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/227 (38%), Positives = 125/227 (55%), Gaps = 11/227 (4%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
HI IMDGNGRWA R R GH +GI+ EIV E I+ ++ FAFS+ NW+R
Sbjct: 6 HIAFIMDGNGRWAKVRNKSRTYGHSQGIKNLLEIVQCCIEKEIEQVSFFAFSMENWKRGK 65
Query: 73 SEIS-ELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT-RLNTGL 130
E++ L L+K+ K ++ I + IG +L ++ LK+ E Q+ + +
Sbjct: 66 EEVNFLLNLLLKNLNGKLLNKMEDLGIVGKWIGFENNLPRTLVTTLKKIESQSSKFEKKI 125
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ + FNYS EI A+K+ D E + +YL T + DL+IRT G
Sbjct: 126 QVNLFFNYSGTLEILEALKDAQLDKEKMKP---------VEEYLITHSLLPIDLLIRTSG 176
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+RLS+F L+ +AYSE +F P+YWPD++RE + QY RDRRFG
Sbjct: 177 EQRLSNFCLFNLAYSEIIFEPKYWPDYNRETLLDNIEQYYQRDRRFG 223
>gi|167043021|gb|ABZ07733.1| putative undecaprenyl diphosphate synthase [uncultured marine
microorganism HF4000_ANIW141A21]
Length = 259
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 125/236 (52%), Gaps = 2/236 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + + P H+G+I+DGN R+A G GH G + + + E GI+N+T+
Sbjct: 21 LASQIGKEAKPKHVGVILDGNRRYANHFGFDFRRGHEIGSKRGKDFLIWCLEYGIENITL 80
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVLK 118
FAFS N+ RP E+ +++K+IK ++ + KN +++R +G L DD+ +
Sbjct: 81 FAFSSENFSRPKEEVDDILKIIKERFEELADDPIVHKNKVRIRALGRLEMLPDDLRKAID 140
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
A T+ NL +A Y R E+ A I Q +++G + S DV I K L D
Sbjct: 141 RASRATKNYDKFNLNVAVAYGGRTELVDATVEIAQQVKNGQLLSKDVTEETITKSLYLPD 200
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
+P D+I+RT GEKRLS+F+LWQ S +FI YWP+ + ++ + R R
Sbjct: 201 LPPLDIILRTSGEKRLSNFMLWQALGSFVIFIDIYWPEIRKIDLARSIRTFQSRSR 256
>gi|116669734|ref|YP_830667.1| undecaprenyl pyrophosphate synthetase [Arthrobacter sp. FB24]
gi|116609843|gb|ABK02567.1| Undecaprenyl pyrophosphate synthetase [Arthrobacter sp. FB24]
Length = 253
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 128/242 (52%), Gaps = 9/242 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ S+ P HIG+++DGN RWA P GH+ G + +E + E+GIK +T+
Sbjct: 15 LLRSLDKDRIPKHIGVMVDGNRRWAKQFNAPTSQGHQAGADKIHEFLGWCQELGIKVVTL 74
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKN-NIKVRVIGNRLSLDDDILCVLKE 119
+ S +N R E+ L+ +I + L + L ++ +I V +G L D + L +
Sbjct: 75 YMLSTDNMSRSGEELDLLMGIIANTLDR----LDEDADISVHAMGAPELLPDYLAERLNK 130
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD-IESG---SVCSHDVDSSLIAKYLD 175
+T + L++ +A Y R EI A++ + D + G + ++ I+++L
Sbjct: 131 LTARTPAHEKLHVNVAVGYGGRREIVDAVRELLHDAVARGKDIGKLADELSVDDISRFLY 190
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
T PDPDL+IRT GE+RLS FL+WQ AYSEF F WP F + F AL Y R RR
Sbjct: 191 TRGQPDPDLVIRTSGEQRLSGFLMWQSAYSEFYFCEALWPAFRKVDFLRALRDYAGRQRR 250
Query: 236 FG 237
FG
Sbjct: 251 FG 252
>gi|120405614|ref|YP_955443.1| undecaprenyl diphosphate synthase [Mycobacterium vanbaalenii PYR-1]
gi|119958432|gb|ABM15437.1| Undecaprenyl pyrophosphate synthetase [Mycobacterium vanbaalenii
PYR-1]
Length = 265
Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 123/236 (52%), Gaps = 8/236 (3%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S P HI ++ DGN RWA G + G+R G E++ E GI+ T++ S
Sbjct: 31 SELPRHIAVLCDGNRRWARESGHDDVSYGYRAGARKIAEMLRWCQEAGIEMATVYLLSTE 90
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
N +R E+S L+++I +++ N VR +G+ + ++ L++A T
Sbjct: 91 NLQRDTEELSALIEIITEVVEE--ICAPANQWSVRTVGDLELIGEESARRLRDAVSSTDG 148
Query: 127 NTG-LNLFIAFNYSSRDEISRAIKNIFQ----DIESGSVCSHDVDSSLIAKYLDTSDVPD 181
N G ++ +A Y R EI A++ + + +G V + I++ L TS PD
Sbjct: 149 NGGTFHVNVAVGYGGRQEIVDAVRALLSKELANGLTGEQLIESVTAEAISENLYTSGQPD 208
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDL+IRT GE+RLS FLLWQ AYSE F YWP+F R F AL Y+ R RR+G
Sbjct: 209 PDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAYWPEFRRVDFLRALRDYSARHRRYG 264
>gi|227832755|ref|YP_002834462.1| Undecaprenyl pyrophosphate synthase [Corynebacterium aurimucosum
ATCC 700975]
gi|262182755|ref|ZP_06042176.1| Undecaprenyl pyrophosphate synthase [Corynebacterium aurimucosum
ATCC 700975]
gi|227453771|gb|ACP32524.1| Undecaprenyl pyrophosphate synthase [Corynebacterium aurimucosum
ATCC 700975]
Length = 256
Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 121/232 (52%), Gaps = 7/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ I+ DGN RWA G + GHR+G +E+++ I+ +TI+ S N +
Sbjct: 26 PRHVAIMADGNRRWAREAGFTDISHGHRQGARKISEMISWCQGTDIEVVTIYLLSTENLK 85
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ L +I + S + ++R++G+ L + + ++ A + T + G
Sbjct: 86 RSEQEVQLLFDIISDVVTH--LSQGDLDCQIRLVGHLDLLPEQVTAKMQCAAEATEDHQG 143
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIE----SGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
+ + IA Y R EI A++++ + S + +V + I L T +PDPDL+
Sbjct: 144 VIVNIAVGYGGRQEIVDAVQSLIRSESEKGLSAEEIAENVTAEAITGNLYTKGLPDPDLV 203
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRT GE+RLS FLLWQ AYSE F YWP F R F AL Y+ R RRFG
Sbjct: 204 IRTSGEQRLSGFLLWQAAYSEIWFTDTYWPAFRRVDFLRALRDYSQRSRRFG 255
>gi|19552216|ref|NP_600218.1| undecaprenyl pyrophosphate synthase [Corynebacterium glutamicum
ATCC 13032]
gi|22261824|sp|P38118|UPPS1_CORGL RecName: Full=Undecaprenyl pyrophosphate synthase 1; Short=UPP
synthase 1; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase 1;
AltName: Full=Undecaprenyl diphosphate synthase 1;
Short=UDS 1
gi|21323758|dbj|BAB98384.1| Undecaprenyl pyrophosphate synthase [Corynebacterium glutamicum
ATCC 13032]
Length = 225
Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 122/226 (53%), Gaps = 7/226 (3%)
Query: 17 IMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEI 75
+ DGN RWA G + GHR G + E+V +V + +T++ S+ N R E+
Sbjct: 1 MCDGNRRWAREAGFTDVSHGHRVGAKKIGEMVRWCDDVDVNLVTVYLLSMENLGRSSEEL 60
Query: 76 SELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIA 135
L +I + + + N +VR++G+ L D + C L++AE+ T NTG+ + +A
Sbjct: 61 QLLFDIIADVADE--LARPETNCRVRLVGHLDLLPDPVACRLRKAEEATVNNTGIAVNMA 118
Query: 136 FNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDVPDPDLIIRTGGE 191
Y R EI A++ + + + ++ S+ I+ +L TS PDPDL+IRT GE
Sbjct: 119 VGYGGRQEIVDAVQKLLTIGKDEGLSVDELIESVKVDAISTHLYTSGQPDPDLVIRTSGE 178
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+RLS F+LWQ AYSE F YWP F R F A+ Y+ R RRFG
Sbjct: 179 QRLSGFMLWQSAYSEIWFTDTYWPAFRRIDFLRAIRDYSQRSRRFG 224
>gi|149238383|ref|XP_001525068.1| dehydrodolichyl diphosphate synthetase [Lodderomyces elongisporus
NRRL YB-4239]
gi|146451665|gb|EDK45921.1| dehydrodolichyl diphosphate synthetase [Lodderomyces elongisporus
NRRL YB-4239]
Length = 350
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 129/243 (53%), Gaps = 9/243 (3%)
Query: 1 MVASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
M ++S+ P P H+GIIMDGN R+A + GH G + I+ E G++ T
Sbjct: 21 MFGKIISTGPVPKHVGIIMDGNRRYARTHKIEIKEGHSMGFDTMANILELLYESGVQAAT 80
Query: 60 IFAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCV 116
++AFSI N+ R E+ L+ L K + + + K ++++++GN L D+L +
Sbjct: 81 VYAFSIENFNRSSYEVKWLMDLAKAKFTQINQNGLLCKDYGVRIKILGNLKLLPADVLEI 140
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT 176
L E E+ T+ NT L + F Y+SRDE++ AI+ + + + +++ I KYL T
Sbjct: 141 LHETEEITKNNTRAVLNVCFPYTSRDEMTHAIRRVVDETTRSQI---EINEETIDKYLYT 197
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFV--FIPEYWPDFSRELFFHALNQYNLRDR 234
D P DL++RT G RLSDFLLWQ + F+ + WP+F+ L +Y+
Sbjct: 198 GDSPPLDLLVRTSGTFRLSDFLLWQCVSPDCAIEFVDKLWPEFTPWDMVKVLIKYSFNKY 257
Query: 235 RFG 237
+G
Sbjct: 258 WYG 260
>gi|73667812|ref|YP_303827.1| undecaprenyl pyrophosphate synthetase [Methanosarcina barkeri str.
Fusaro]
gi|72394974|gb|AAZ69247.1| Undecaprenyl pyrophosphate synthetase [Methanosarcina barkeri str.
Fusaro]
Length = 292
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 132/238 (55%), Gaps = 11/238 (4%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+++S P HI +IMDGN R+A G R GH G EV +++ E+G+K LT++AFS
Sbjct: 21 ILNSEIPHHIAVIMDGNRRYAGQFGKARSFGHAMGAEVTEKVIEWCYEIGVKQLTLYAFS 80
Query: 65 INNWRRPVSEISELVKLIK-SFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEA 120
N++R E+ L LI FLK YS + +VRVIG+R L + +++
Sbjct: 81 TENFQRSEEEVDGLFNLINDKFLK--LYSDPRTHEKETQVRVIGDRSKLPAFLNESIEKI 138
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS--- 177
E T+ L +A Y R +I +A+++I I +G + +VD SLI+K+L +
Sbjct: 139 EKATKNYGKFYLNVAIAYGGRQDIIQAVRDIAGCISNGKLSLEEVDESLISKHLYPAPGF 198
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFV--FIPEYWPDFSRELFFHALNQYNLRD 233
VP+ DL+IRTGG++R+S+FL WQ SE F +WP+F + ++ Y R+
Sbjct: 199 SVPNVDLVIRTGGDERVSNFLPWQANGSECAAYFCAPFWPEFRKIDLLRSVRVYQARE 256
>gi|195438892|ref|XP_002067366.1| GK16221 [Drosophila willistoni]
gi|194163451|gb|EDW78352.1| GK16221 [Drosophila willistoni]
Length = 302
Score = 139 bits (349), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 117/211 (55%), Gaps = 3/211 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +MDGN R+A ++ + + GH G + + ++GI+ +T FAFSI N++R
Sbjct: 27 PHHVAFVMDGNRRFARSQHIDKIEGHSMGFAKLADCLRWCLDIGIREVTTFAFSIENFKR 86
Query: 71 PVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
E+ L L + K L ++ I++RVIGN L D+ ++ A +T N
Sbjct: 87 SSEEVEGLFNLAREKFCKLLDETDRLNEHGIRIRVIGNIELLPLDLQKLIALAMLRTEHN 146
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L L +AF+Y+SRDEI++A+K + + E G + D+ L+ + + T P PDL+ R
Sbjct: 147 DKLFLNVAFSYTSRDEITQAVKTVLELGEEGHLTGEDISERLLEECMYTRHSPPPDLVFR 206
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS 218
T GE RLSDF++WQ++ S F WP +
Sbjct: 207 TSGESRLSDFMMWQLSNSVLYFTNVLWPQIT 237
>gi|220912015|ref|YP_002487324.1| undecaprenyl diphosphate synthase [Arthrobacter chlorophenolicus
A6]
gi|219858893|gb|ACL39235.1| undecaprenyl diphosphate synthase [Arthrobacter chlorophenolicus
A6]
Length = 257
Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 121/231 (52%), Gaps = 7/231 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+++DGN RWA P GH+ G + +E + E+G+K +T++ S +N R
Sbjct: 29 PRHIGVMVDGNRRWAKQFNAPTSQGHQAGADKIHEFLGWCRELGVKVVTLYMLSTDNMNR 88
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ +I + L + + NI V +G L + L + +T ++ +
Sbjct: 89 SSEELDLLMGIIANTLDR---LDEDENISVHAMGAPELLPGYLAERLNKLTARTPVHEKI 145
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDVPDPDLII 186
++ +A Y R EI A++ + D + + + L I+++L T PDPDL+I
Sbjct: 146 HVNVAVGYGGRREIVDAVRELLHDAVAKGADINQLADELSVDDISRFLYTRGQPDPDLVI 205
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE+RLS FL+WQ AYSEF F WP F + F AL Y R RR+G
Sbjct: 206 RTSGEQRLSGFLMWQSAYSEFYFCEALWPAFRKVDFLRALRDYAGRQRRYG 256
>gi|163841776|ref|YP_001626181.1| trans,cis-farnesyl diphosphate synthase [Renibacterium salmoninarum
ATCC 33209]
gi|162955252|gb|ABY24767.1| trans,cis-farnesyl diphosphate synthase [Renibacterium salmoninarum
ATCC 33209]
Length = 255
Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 122/242 (50%), Gaps = 9/242 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ S+ P H+ I++DGN RWA GH+ G+E +E + + G+K LTI
Sbjct: 17 LAKSLKGQKIPAHVAIVVDGNRRWAKQFNATTGHGHQAGVEKIHEFLGWCQDFGVKTLTI 76
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNN-IKVRVIGNRLSLDDDILCVLKE 119
+ S N R E+ EL+ +I + + + L+ + I V +G L D + L
Sbjct: 77 YMLSTENVNRSKEELDELLGIIATLMDR----LESDKAISVSAMGAPELLPDYLAERLIR 132
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD-IESG---SVCSHDVDSSLIAKYLD 175
+ L++ +A Y R EI A++ + ++ + G + ++D I++YL
Sbjct: 133 LTQHKPASEKLHINLAVGYGGRREIVDAVRGLLREAVTEGKDIGELAQELDVEDISRYLY 192
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
TS PDPDL IRT GE+RLS FLLWQ AYSE F WP F + F AL Y R RR
Sbjct: 193 TSGQPDPDLFIRTSGEQRLSGFLLWQSAYSEMYFCEVLWPAFRKVDFLRALRDYAGRHRR 252
Query: 236 FG 237
+G
Sbjct: 253 YG 254
>gi|313837028|gb|EFS74742.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL037PA2]
gi|314929384|gb|EFS93215.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL044PA1]
gi|314971532|gb|EFT15630.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL037PA3]
gi|328907906|gb|EGG27668.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium sp. P08]
Length = 273
Score = 138 bits (347), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 129/235 (54%), Gaps = 12/235 (5%)
Query: 11 PDHIGIIMDGNGRWAA--ARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ ++ DGN RWA A G P AG+ G + E A VGI +T++ S +N
Sbjct: 42 PQHVAVLADGNRRWARLNAPGEPLVAGYAAGADRLREFCAWCDAVGIPIITLWVLSTDNL 101
Query: 69 RRP-VSEISELVKLIKSFLKKGFYSLKKNN-IKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
+R E+ L+K+I+S + SL N+ +V+ +G+ L DD+ L A +
Sbjct: 102 QRAETGELGPLLKVIESLVD----SLAANSRWRVQAVGDLDLLPDDMAESLCRAGRTSAK 157
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIF-QDIESGS---VCSHDVDSSLIAKYLDTSDVPDP 182
+ G+++ +A Y R E+ A++++ ++ E G+ + ++ I +L T PDP
Sbjct: 158 HVGMHINVAVAYGGRHELRDAVRSLLAEEAEKGTRLAELAQTLEIDQIEDHLYTRGQPDP 217
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DLIIRT GE+RLS FL+WQ A+SEF F WPDF + F AL + R+RR+G
Sbjct: 218 DLIIRTSGEQRLSGFLMWQSAHSEFYFCEALWPDFRKVDFLRALRSFTQRERRYG 272
>gi|126275948|ref|XP_001387164.1| cis-prenyltransferase involved in dolichol synthesis
[Scheffersomyces stipitis CBS 6054]
gi|126213033|gb|EAZ63141.1| cis-prenyltransferase involved in dolichol synthesis [Pichia
stipitis CBS 6054]
Length = 318
Score = 138 bits (347), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 130/225 (57%), Gaps = 15/225 (6%)
Query: 5 MMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+M + P P+H+ +IMDGN R++ A+ LP GH G E ++ +GI ++TI+AF
Sbjct: 41 VMKTGPIPNHVALIMDGNRRYSKAKNLPLKEGHISGAETLLTVLDVCYRLGIDHVTIYAF 100
Query: 64 SINNWRRPVSEISELVKLIKSFLKK-----GFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
SI N+ R E+ L L++ + + Y+ + NN+++R+IGNR + DIL L+
Sbjct: 101 SIENFNRSQEEVDTLFGLLRDKITQISEHEDSYA-RFNNVRIRIIGNRTYIPPDILADLE 159
Query: 119 EAE---DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD--VDSSLIAKY 173
AE ++ N LN + F Y+SRD+I+ ++KNI + ++ + S D +L
Sbjct: 160 RAELVTKDSKHNRTLN--VCFPYTSRDDIAISMKNIAEKVQVQEIPSKDEITLQTLKENN 217
Query: 174 LDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFV-FIPEYWPDF 217
+DVP+ D++IRT G RLSDF+LWQ ++ + F+ WPDF
Sbjct: 218 YFGADVPELDILIRTSGHTRLSDFMLWQANFNCMIEFVDTLWPDF 262
>gi|161528924|ref|YP_001582750.1| undecaprenyl diphosphate synthase [Nitrosopumilus maritimus SCM1]
gi|160340225|gb|ABX13312.1| undecaprenyl diphosphate synthase [Nitrosopumilus maritimus SCM1]
Length = 263
Score = 138 bits (347), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 130/240 (54%), Gaps = 6/240 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAAR-GLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + + P+H+ +I+DGN RWA LP+ AGH KG + ++ E IK +T++
Sbjct: 24 SEIQTGDIPNHVALILDGNRRWAKRHLSLPK-AGHWKGADAVENLLDWCEEFNIKIVTLY 82
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVLKE 119
A S N R E+ L +LI+ L+K + + ++ ++V+ IG L D I +L++
Sbjct: 83 ALSAENLDRNDEELDHLYELIRMRLEKLYNDPRIHRSKMRVKGIGRIELLPDSIKEILQK 142
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV 179
+D T+ L IA Y + E+ A+K I + I+ G + + I L TS +
Sbjct: 143 LDDATKDYDNHFLNIALAYGGQYELVDAVKKIGEKIKDGQLDVEKITKKEIESNLYTSHL 202
Query: 180 PD--PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
P PD+I+RT GEKRLS FL+WQ AYSE VF+ +WP+F + A+ + R RR G
Sbjct: 203 PQSSPDMILRTSGEKRLSGFLMWQSAYSELVFMDIFWPEFRKIDLMRAIRTFQERKRRLG 262
>gi|118576653|ref|YP_876396.1| undecaprenyl pyrophosphate synthase [Cenarchaeum symbiosum A]
gi|118195174|gb|ABK78092.1| undecaprenyl pyrophosphate synthase [Cenarchaeum symbiosum A]
Length = 262
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 124/231 (53%), Gaps = 4/231 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +I+DGN RWA AGH +G + ++ E IK +T++A S N R
Sbjct: 31 PRHVALILDGNRRWARRNLDFSGAGHTRGADAVENLLDWCEEFDIKIVTLYALSAENLDR 90
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRV--IGNRLSLDDDILCVLKEAEDQTRLNT 128
E+ L LI++ L+K + + + +K+RV +G + + + VL ++ T+
Sbjct: 91 KDEELDLLYDLIRARLEKLYVDPRIHRMKMRVKAMGRKELMPPPVRDVLDRLDEATKGYD 150
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD--PDLII 186
L IA Y +DE+ A+K I + I+ G + + +D I L TS +P PD+I+
Sbjct: 151 EHFLNIAVAYGGQDEMLDAVKKIGKKIQDGELDADKIDKDEIESNLYTSHLPQSSPDMIL 210
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GEKRLS FLLWQ AYSE VF+ +WPDF + A+ + R RR G
Sbjct: 211 RTSGEKRLSGFLLWQSAYSELVFMDVFWPDFRKIDLMRAIRMFQKRKRRIG 261
>gi|18857969|ref|NP_572425.1| CG10778 [Drosophila melanogaster]
gi|17861830|gb|AAL39392.1| GM02310p [Drosophila melanogaster]
gi|22831913|gb|AAF46296.2| CG10778 [Drosophila melanogaster]
gi|220943196|gb|ACL84141.1| CG10778-PA [synthetic construct]
Length = 300
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 125/227 (55%), Gaps = 5/227 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +MDGN R+A ++ + + GH +G E + + +VG++ +T FAFSI N++R
Sbjct: 27 PHHVAFVMDGNRRFARSQQIDKIEGHSRGFEKLADCLRWCLDVGVREVTTFAFSIENFKR 86
Query: 71 PVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
E+ L L + + L + L ++ I++RVIGN L D+ ++ A T N
Sbjct: 87 SNEEVEGLFNLAREKFARLLEETARLDEHGIRIRVIGNIELLPHDLQKLVASAMLSTERN 146
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L L +AF Y+SRDEI++A++ I + S + D+ L+ + L T P PDL+ R
Sbjct: 147 DKLFLNVAFAYTSRDEITQAVETILRH-GSQDLAGEDISERLLEECLYTRHSPPPDLVFR 205
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
T GE RLSDF++WQ++ S F WP + F ++ Y RDR
Sbjct: 206 TSGETRLSDFMMWQLSTSVLYFSNVLWPQITFWHFLASILAYQ-RDR 251
>gi|302792989|ref|XP_002978260.1| hypothetical protein SELMODRAFT_233104 [Selaginella moellendorffii]
gi|300154281|gb|EFJ20917.1| hypothetical protein SELMODRAFT_233104 [Selaginella moellendorffii]
Length = 235
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 126/231 (54%), Gaps = 9/231 (3%)
Query: 16 IIMDGNGRWAAARGLPRCAGHRKGIEVF----NEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+IMDGN RWA ARG+ + R E EIV +++ GIK LT+FAFS N+ RP
Sbjct: 1 MIMDGNSRWAKARGIAKEFQLRAAAEACYSNAREIVRLSSDWGIKALTLFAFSTENFLRP 60
Query: 72 VSEISELVKLIKSFLK-KGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ + ++ + L ++ + I+ IG+ L + + EA+ T NTG+
Sbjct: 61 REEVDQWMQQFERVLSLDDPATMLLDGIQFHCIGDTARLPRTLQVKISEAQCITSGNTGM 120
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYL----DTSDVPDPDLII 186
+A Y ++ +A + + ++++ G++ D+D +++ L DV P+L++
Sbjct: 121 KFVMAIGYGGHSDLVQACQALAREVQQGNLAVQDIDQINLSRRLMLGERCEDVGAPELLV 180
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE+RLS+F+LW +AYSE VF + WPDF E + +AL + R R G
Sbjct: 181 RTSGEQRLSNFMLWHLAYSELVFEKQLWPDFGEEEYKNALVAFQGRKRTLG 231
>gi|305662458|ref|YP_003858746.1| Undecaprenyl pyrophosphate synthetase [Ignisphaera aggregans DSM
17230]
gi|304377027|gb|ADM26866.1| Undecaprenyl pyrophosphate synthetase [Ignisphaera aggregans DSM
17230]
Length = 282
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/233 (36%), Positives = 125/233 (53%), Gaps = 7/233 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN-WR 69
P H+ II DGN RWA GL GH G E++ ++GIK +TI+A S N
Sbjct: 50 PMHVAIIPDGNRRWARQLGLDPKEGHVHGYMKMKEVLQWLYDLGIKIVTIYAMSYENCLY 109
Query: 70 RPVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
R E L ++I + ++ S ++K I V+V G +L L L + +Q +N
Sbjct: 110 RSEDEKERLFEIIANGFRELMSSGIIEKYGIHVKVFG-KLELAKKTLVEEAKKLEQISIN 168
Query: 128 TGLN-LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD--VPDPDL 184
L IA Y R EI A+K I ++++ G + ++ + K L TS +P+PDL
Sbjct: 169 NRERYLNIALCYGGRQEIVDAVKAIAEEVKRGILDPSEITEETLLKKLSTSHLPIPEPDL 228
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+IRT GE R+S+FLLWQ+AYSE F YWP+F + + A+ Y R+RRFG
Sbjct: 229 VIRTSGELRISNFLLWQIAYSELYFCDVYWPNFRKIDLYRAIRSYQSRERRFG 281
>gi|195480296|ref|XP_002101214.1| GE17496 [Drosophila yakuba]
gi|194188738|gb|EDX02322.1| GE17496 [Drosophila yakuba]
Length = 300
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 125/227 (55%), Gaps = 5/227 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +MDGN R+A ++ + + GH +G E + + +VG++ +T FAFSI N++R
Sbjct: 27 PHHVAFVMDGNRRFARSQQIDKIEGHSRGFEKLADCLRWCLDVGVREVTTFAFSIENFKR 86
Query: 71 PVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
E+ L L + + L + L ++ I++RVIGN L D+ ++ A T N
Sbjct: 87 SNEEVEGLFNLAREKFARLLEETARLDEHGIRIRVIGNIELLPLDLQKLVASAMLSTECN 146
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L L +AF Y+SRDEI++A++ I + S + D+ L+ + L T P PDL+ R
Sbjct: 147 DKLFLNVAFAYTSRDEITQAVETILRH-GSQDLAGEDISERLLEECLYTRHSPPPDLVFR 205
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
T GE RLSDF++WQ++ S F WP + F ++ Y RDR
Sbjct: 206 TSGETRLSDFMMWQLSTSVLYFSNVLWPQITFWHFLASILAYQ-RDR 251
>gi|150401559|ref|YP_001325325.1| undecaprenyl diphosphate synthase [Methanococcus aeolicus Nankai-3]
gi|150014262|gb|ABR56713.1| undecaprenyl diphosphate synthase [Methanococcus aeolicus Nankai-3]
Length = 263
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 124/231 (53%), Gaps = 4/231 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+IMDGN R G GH+ G + E V +G+K +T+++FS N+ R
Sbjct: 32 PKHIGVIMDGNRRMTKTIGSKSMIGHKIGAKKSLEFVDWCVNLGVKVITLYSFSQENFNR 91
Query: 71 PVSEISELVKLI-KSFLKKGFYSL-KKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
E+ L+ L + F+ S+ K I+++ IG L + + + AE++T+
Sbjct: 92 SKEEVDFLMDLFEQEFMATADDSMVHKKKIRIKAIGRVDLLPERVRKAIDYAEERTKDYN 151
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP--DPDLII 186
+ +A Y + EI AIK+I I++ + D+ + I++ L TS +P +PDLII
Sbjct: 152 NYYVNVAIAYGGQQEIVDAIKDIAYKIKNNELNVEDISVNTISERLYTSHLPHPNPDLII 211
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE+R+S+FL WQ YSE F YWP F + F A+ Y R RR+G
Sbjct: 212 RTSGEERISNFLTWQSIYSELYFCEVYWPQFRKIDFLRAIRDYQKRKRRYG 262
>gi|302765779|ref|XP_002966310.1| hypothetical protein SELMODRAFT_230863 [Selaginella moellendorffii]
gi|300165730|gb|EFJ32337.1| hypothetical protein SELMODRAFT_230863 [Selaginella moellendorffii]
Length = 235
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 125/231 (54%), Gaps = 9/231 (3%)
Query: 16 IIMDGNGRWAAARGLPRCAGHRKGIEVF----NEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+IMDGN RWA ARG+ + R E EIV +++ GIK LT+FAFS N+ RP
Sbjct: 1 MIMDGNSRWAKARGIAKEFQLRAAAEACYSNAREIVRLSSDWGIKALTLFAFSTENFLRP 60
Query: 72 VSEISELVKLIKSFLK-KGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ + ++ + L ++ + I+ IG+ L + + EA+ T NTG+
Sbjct: 61 REEVDQWMQQFERVLSLDDPATMLLDGIQFHCIGDTARLPRTLQDKISEAQCITSGNTGM 120
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYL----DTSDVPDPDLII 186
+A Y ++ +A K + ++++ G + D+D +++ L DV P+L++
Sbjct: 121 KFVMAIGYGGHSDLVQACKALAREVQQGKLAVQDIDQINLSRRLMLGERCEDVGAPELLV 180
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE+RLS+F+LW +AYSE VF + WPDF E + +AL + R R G
Sbjct: 181 RTSGEQRLSNFMLWHLAYSELVFEKKLWPDFGEEEYKNALVAFQGRKRTLG 231
>gi|195355990|ref|XP_002044466.1| GM11961 [Drosophila sechellia]
gi|194131631|gb|EDW53673.1| GM11961 [Drosophila sechellia]
Length = 300
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 125/227 (55%), Gaps = 5/227 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +MDGN R+A ++ + + GH +G E + + +VG++ +T FAFSI N++R
Sbjct: 27 PHHVAFVMDGNRRFARSQQIDKIEGHSRGFEKLADCLRWCLDVGVREVTTFAFSIENFKR 86
Query: 71 PVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
E+ L L + + L + L ++ I++RVIGN L D+ ++ A T N
Sbjct: 87 SNEEVEGLFNLAREKFARLLEETARLDEHGIRIRVIGNIELLPLDLQKLVASAMLSTERN 146
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L L +AF Y+SRDEI++A++ I + S + D+ L+ + L T P PDL+ R
Sbjct: 147 DKLFLNVAFAYTSRDEITQAVETILRH-GSQDLAGEDISERLLEECLYTRHSPPPDLVFR 205
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
T GE RLSDF++WQ++ S F WP + F ++ Y RDR
Sbjct: 206 TSGETRLSDFMMWQLSTSVLYFSNVLWPQITFWHFLASILAYQ-RDR 251
>gi|225712398|gb|ACO12045.1| Dehydrodolichyl diphosphate synthase [Lepeophtheirus salmonis]
Length = 265
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 128/220 (58%), Gaps = 6/220 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+++ + + S P H+ IMDGN R+A + GH G + +E + ++GI+ +++
Sbjct: 20 LLSILRTGSLPRHVAFIMDGNRRFARKSKVELIKGHSSGFDKLSETLFWCRDLGIEEVSV 79
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++RP E+++L+ L +S +K F + L + ++V+VIGN L +D+ V+
Sbjct: 80 YAFSIENFKRPQHEVNDLLDLARSKFQKLFSEIHRLAEKGVRVQVIGNLALLPEDLQEVI 139
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
++ + T+ ++ L +AF Y+SRDE++ AI++ +ES S ++ + +
Sbjct: 140 RKCVESTKDHSKCTLNVAFAYTSRDELTTAIRSA---VESEKDSSAHIEPKTLENHFYGK 196
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDF 217
DLIIRT GE RLSDF+LWQ +Y+ F WP+F
Sbjct: 197 GRSQVDLIIRTSGEVRLSDFMLWQGSYAVTYFTKVLWPEF 236
>gi|297626870|ref|YP_003688633.1| Undecaprenyl pyrophosphate synthase
(di-trans,poly-cis-decaprenylcistransferase)
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
gi|296922635|emb|CBL57212.1| Undecaprenyl pyrophosphate synthase
(di-trans,poly-cis-decaprenylcistransferase)
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
Length = 269
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 124/233 (53%), Gaps = 8/233 (3%)
Query: 11 PDHIGIIMDGNGRWAA--ARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ ++ DGN RWA A G P G++ G + E V EVGI +T++ S N
Sbjct: 38 PRHVAVLADGNRRWARTNAPGQPLEVGYKAGADKLREFVGWCDEVGIGVVTLWVLSTENL 97
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+R S EL+ L+ + + +V+ +G+ L + + L EA +T NT
Sbjct: 98 QR--SGPDELLPLMGVIDRLTRDLAAVPDYRVQPMGDLDLLPESLATTLCEAALETIDNT 155
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQ-DIESGSVC---SHDVDSSLIAKYLDTSDVPDPDL 184
G+++ IA Y R E+ A++++ + G+ S +D + IA +L T PDPDL
Sbjct: 156 GIHINIAVAYGGRHELRDAVRSLLAAEAAKGTTLEELSRTLDPNQIADHLYTKGQPDPDL 215
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+IRT GE+RLS FL WQ A+SE F WPDF + F+ AL Y R+RRFG
Sbjct: 216 LIRTSGEQRLSGFLPWQSAHSELYFCEALWPDFRKIDFYRALRSYQQRERRFG 268
>gi|110669210|ref|YP_659021.1| di-trans,poly-cis-decaprenylcistransferase [Haloquadratum walsbyi
DSM 16790]
gi|109626957|emb|CAJ53429.1| di-trans,poly-cis-decaprenylcistransferase [Haloquadratum walsbyi
DSM 16790]
Length = 317
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 119/227 (52%), Gaps = 4/227 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ II DGN R+A +G GHR+G + ++ E+GI+ LT++AFS N+ R
Sbjct: 27 PTHVAIIQDGNRRYAREQGNDAHEGHREGAQTTERVLEWCEELGIEELTLYAFSTENFTR 86
Query: 71 PVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
P +E+ L LI+S L + +N++++ IG+ L + ++ AE QT
Sbjct: 87 PDAELQPLFDLIESKLYEFADAERTHENSVRIGAIGDIDRLPQRVQSAVEYAESQTAAYD 146
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
L IA Y R E+ RA +++ D+++G + VD+ + L D DLI+RT
Sbjct: 147 DFRLNIALAYGGRSELLRAARSVAHDVDAGELDPSTVDAETVECRLSRHTTRDVDLIVRT 206
Query: 189 GGEKRLSDFLLWQVAYSEFV--FIPEYWPDFSRELFFHALNQYNLRD 233
GG++R S+FL W +E F YWP+FS+ F L Y R+
Sbjct: 207 GGDERTSNFLPWHANGNEAAVYFCAPYWPEFSKIDFLRGLRTYESRE 253
>gi|302024533|ref|ZP_07249744.1| undecaprenyl pyrophosphate synthase [Streptococcus suis 05HAS68]
Length = 165
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/165 (45%), Positives = 95/165 (57%), Gaps = 4/165 (2%)
Query: 79 VKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNY 138
+ L F K L NN+K+++IG+ L L L +AE +T+ NTGL L A NY
Sbjct: 1 MNLPVEFYDKYVPELHANNVKIQMIGDHSKLPVPTLNALYKAEQKTKSNTGLILNFALNY 60
Query: 139 SSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLIIRTGGEKRL 194
RDE++RA+K I QD+ D+D LIA YL T + DPDL+IRT GE RL
Sbjct: 61 GGRDEVTRAVKAIAQDVLDAKFNPGDIDEKLIADYLYTGTLSPTLRDPDLVIRTSGELRL 120
Query: 195 SDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
S+FL WQ AYSE F WPDF E A+ +YN R RRFGG+
Sbjct: 121 SNFLPWQTAYSELYFTDIAWPDFDGEALKLAIKEYNRRHRRFGGV 165
>gi|194897094|ref|XP_001978589.1| GG17596 [Drosophila erecta]
gi|190650238|gb|EDV47516.1| GG17596 [Drosophila erecta]
Length = 300
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 125/227 (55%), Gaps = 5/227 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +MDGN R+A ++ + + GH +G E + + +VG++ +T FAFSI N++R
Sbjct: 27 PHHVAFVMDGNRRFARSQQIDKIEGHSRGFEKLADCLRWCLDVGVREVTTFAFSIENFKR 86
Query: 71 PVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
E+ L L + + L + L ++ I++RVIGN L D+ ++ A T N
Sbjct: 87 SNEEVEGLFNLAREKFARLLEETARLDEHGIRIRVIGNIELLPLDLQKLVASAMLSTERN 146
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L L +AF Y+SRDEI++A++ I + S + D+ L+ + L T P PDL+ R
Sbjct: 147 DKLFLNVAFAYTSRDEITQAVETILRH-GSQDLAGEDISERLLEECLYTRHSPPPDLVFR 205
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
T GE RLSDF++WQ++ S F WP + F ++ Y RDR
Sbjct: 206 TSGETRLSDFMMWQLSTSVLYFSNVLWPQITFWHFLASILAYQ-RDR 251
>gi|313814867|gb|EFS52581.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL059PA1]
gi|315098905|gb|EFT70881.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL059PA2]
Length = 273
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 124/235 (52%), Gaps = 12/235 (5%)
Query: 11 PDHIGIIMDGNGRWAA--ARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ ++ DGN RWA A G P AG+ G + E VGI +T++ S +N
Sbjct: 42 PQHVAVLADGNRRWARLNAPGEPLVAGYEAGADRLREFCTWCDAVGIPIITLWVLSTDNL 101
Query: 69 RRP-VSEISELVKLIKSFLKKGFYSLKKNN-IKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
+R E+ L+K+IKS + SL N+ +V+ +G+ L DD+ L A +
Sbjct: 102 QRAETGELGPLLKVIKSLVD----SLADNSRWRVQAVGDLDLLPDDMAESLCRAGRTSIG 157
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDVPDP 182
+ G+++ +A Y R E+ A +++ + D+ +L I +L T PDP
Sbjct: 158 HVGMHINVAVAYGGRHELRDAFRSLLAEEAEKGTSLADLARTLEIDQIEDHLYTRGQPDP 217
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DLIIRT GE+RLS FL+WQ A+SEF F WPDF + F AL + R+RR+G
Sbjct: 218 DLIIRTSGEQRLSGFLMWQSAHSEFYFCEALWPDFRKVDFLRALRSFTQRERRYG 272
>gi|307352897|ref|YP_003893948.1| undecaprenyl diphosphate synthase [Methanoplanus petrolearius DSM
11571]
gi|307156130|gb|ADN35510.1| undecaprenyl diphosphate synthase [Methanoplanus petrolearius DSM
11571]
Length = 257
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 122/217 (56%), Gaps = 11/217 (5%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
PDHI II DGN R+A RG+ GHR G E N ++ A ++G+++LT++ FS N+ R
Sbjct: 24 PDHIAIIQDGNRRYAKERGIDVAIGHRMGAEKTNMVLEWARDIGVRHLTLYCFSTENFNR 83
Query: 71 PVSEISELVKLIKSFLKKGFYSLK-----KNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
E +EL KL F +K +L+ +N I+ +++G+R + +D+L +++ E+ T+
Sbjct: 84 SEYEQNELFKL---FTEKAMETLEDERVHENRIRFQMVGDRDLVPEDLLKRIEKVEEVTK 140
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYL-DTSDVPDPDL 184
+ +A Y R+EI A K+I DIE G + D+ LI +L ++P DL
Sbjct: 141 NYNNFTINLALAYGGRNEILHATKSILNDIERGVLTPEDITEDLINAHLYHGMNIPPVDL 200
Query: 185 IIRTGGEKRLSDFLLWQVAYSE--FVFIPEYWPDFSR 219
IIRTG +KR S+FL W +E F YWP F +
Sbjct: 201 IIRTGDDKRTSNFLPWLANGNESAVYFCAPYWPVFRK 237
>gi|290462293|gb|ADD24194.1| Dehydrodolichyl diphosphate synthase [Lepeophtheirus salmonis]
Length = 265
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 128/220 (58%), Gaps = 6/220 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+++ + + S P H+ IMDGN R+A + GH G + +E + ++GI+ +++
Sbjct: 20 LLSILRTGSLPRHVAFIMDGNRRFARKSKVELIEGHSSGFDKLSETLFWCRDLGIEEVSV 79
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++RP E+++L+ L +S +K F + L + ++V+VIGN L +D+ V+
Sbjct: 80 YAFSIENFKRPQHEVNDLLDLARSKFQKLFSEIHRLAEKGVRVQVIGNLALLPEDLQEVI 139
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
++ + T+ ++ L +AF Y+SRDE++ AI++ +ES S ++ + +
Sbjct: 140 RKCVESTKDHSKCTLNVAFAYTSRDELTTAIRSA---VESEKDSSAHIEPKTLENHFYGK 196
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDF 217
DLIIRT GE RLSDF+LWQ +Y+ F WP+F
Sbjct: 197 GRSQVDLIIRTSGEVRLSDFVLWQGSYAVTYFTKVLWPEF 236
>gi|18376082|emb|CAD21109.1| probable cis-prenyltransferase [Neurospora crassa]
Length = 283
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 132/247 (53%), Gaps = 19/247 (7%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ +MDGN R+A + + GH G E ++ + G++ +T+
Sbjct: 30 LIGALKQGPVPRHVAFVMDGNRRYARSHKIETIEGHHLGFEALARVLEICYKCGVEVVTV 89
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N+ RP E+ L++L K L++ L++ VRV+G R L DD+L V+
Sbjct: 90 YAFSIENFNRPKYEVDGLMQLAKVKLEQLIQHGELLERYGASVRVLGERDLLSDDVLEVI 149
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKN--------IFQDIESGSVCSHDVDSSL 169
A T+ N L I F Y+SR+E++ AI++ I+ ++E ++ +
Sbjct: 150 DRAVSTTKNNKKCILNICFPYTSREEMTTAIRSTDGSNHVTIYPNVE-------NITTET 202
Query: 170 IAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFFHALNQ 228
I K++ T+D P D+ +RT G +RLSDF+LWQ ++ F+ +WP+F F L +
Sbjct: 203 IDKHMYTADCPPLDIFVRTSGVERLSDFMLWQCHQDTQMFFLKCFWPEFDLRHFLPVLLE 262
Query: 229 YNLRDRR 235
+ R ++
Sbjct: 263 WQWRQKK 269
>gi|282854468|ref|ZP_06263805.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes J139]
gi|282583921|gb|EFB89301.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes J139]
gi|314980829|gb|EFT24923.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL110PA3]
gi|315090284|gb|EFT62260.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL110PA4]
Length = 273
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 124/235 (52%), Gaps = 12/235 (5%)
Query: 11 PDHIGIIMDGNGRWAA--ARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ ++ DGN RWA A G P AG+ G + E VGI +T++ S +N
Sbjct: 42 PQHVAVLADGNRRWARLNAPGEPLVAGYEAGADRLREFCTWCDAVGIPIITLWVLSTDNL 101
Query: 69 RRP-VSEISELVKLIKSFLKKGFYSLKKNN-IKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
+R E+ L+K+I+S + SL N+ +V+ +G+ L DD+ L A +
Sbjct: 102 QRAETGELGPLLKVIESLVD----SLADNSRWRVQAVGDLDLLPDDMAESLCRAGHTSAG 157
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDVPDP 182
+ G+++ +A Y R E+ A +++ + D+ +L I +L T PDP
Sbjct: 158 HVGMHINVAVAYGGRHELRDAFRSLLAEEAEKGTSLADLARTLEIDQIEDHLYTRGQPDP 217
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DLIIRT GE+RLS FL+WQ A+SEF F WPDF + F AL + R+RR+G
Sbjct: 218 DLIIRTSGEQRLSGFLMWQSAHSEFYFCEALWPDFRKVDFLRALRSFTQRERRYG 272
>gi|52548907|gb|AAU82756.1| undecaprenyl pyrophosphate synthetase [uncultured archaeon
GZfos19C8]
Length = 322
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 126/237 (53%), Gaps = 14/237 (5%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGN R+A G+ G+ G E+ ++ EVG+K LTI+AFSI N+ R
Sbjct: 45 PEHVAIIMDGNRRYAKKIGISTEEGYLYGAEITEHVIEWCFEVGVKQLTIYAFSIENFCR 104
Query: 71 PVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
E L KL++ +K + K ++V+ IG+ L D + +++AE +T
Sbjct: 105 SAEEKERLFKLMRVEFEKISKDERVHKRGVRVKAIGDLNLLPDSVKEAIQKAEQETAHYN 164
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV--------- 179
LF+A YS R EI +++ I + ++ GS+ ++D I+K+L S++
Sbjct: 165 SFKLFVAVAYSGRMEIVDSVRIIAEMVKRGSLSVEEIDEETISKHLYISEIEAGDSDSGA 224
Query: 180 -PDPDLIIRTGGEKRLSDFLLWQVAYSEFV--FIPEYWPDFSRELFFHALNQYNLRD 233
DLIIRTGGE RLS+F+ WQ +E F +WP+F + A+ Y R+
Sbjct: 225 KASVDLIIRTGGEMRLSNFVPWQALGNECAAYFCAPFWPEFRKIDLLRAIRTYQERE 281
>gi|227548187|ref|ZP_03978236.1| undecaprenyl pyrophosphate synthetase [Corynebacterium
lipophiloflavum DSM 44291]
gi|227079748|gb|EEI17711.1| undecaprenyl pyrophosphate synthetase [Corynebacterium
lipophiloflavum DSM 44291]
Length = 256
Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 123/232 (53%), Gaps = 7/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI ++ DGN RWA G + GHR G E+V +AE+ I+ +TI+ S N +
Sbjct: 26 PRHIAVMADGNRRWARHVGYTDVSHGHRAGAAKIGELVRWSAEMDIEVVTIYLLSTENLQ 85
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ L +I + + + + +++++G+ L ++ ++ + T G
Sbjct: 86 RTTEEVELLFDIISDVVAD--LAAEDYSCRIKLVGHLELLPPEVAERMQRSAAATSAKRG 143
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDVPDPDLI 185
L++ IA Y R EI A++ + D + + D+ S + I + L TS PDPDL+
Sbjct: 144 LSVNIAVGYGGRQEIVDAVRALIGDELAAGTAAADLASRVTIDSIGENLYTSGQPDPDLV 203
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRT GE+RLS FLLWQ AYSE F YWP F + F AL Y+ R RRFG
Sbjct: 204 IRTSGEQRLSGFLLWQAAYSEIWFTDTYWPAFRKIDFLRALRDYSQRSRRFG 255
>gi|314922872|gb|EFS86703.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL001PA1]
gi|314966302|gb|EFT10401.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL082PA2]
gi|315093467|gb|EFT65443.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL060PA1]
gi|315103023|gb|EFT74999.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL050PA2]
gi|327327083|gb|EGE68864.1| undecaprenyl diphosphate synthase [Propionibacterium acnes
HL103PA1]
Length = 273
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 124/235 (52%), Gaps = 12/235 (5%)
Query: 11 PDHIGIIMDGNGRWAA--ARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ ++ DGN RWA A G P AG+ G + E VGI +T++ S +N
Sbjct: 42 PQHVAVLADGNRRWARLNAPGEPLVAGYEAGADRLREFCTWCDAVGIPIITLWVLSTDNL 101
Query: 69 RRP-VSEISELVKLIKSFLKKGFYSLKKNN-IKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
+R E+ L+K+I+S + SL N+ +V+ +G+ L DD+ L A +
Sbjct: 102 QRAETGELGPLLKVIESLVD----SLADNSRWRVQAVGDLDLLPDDMAESLCRAGRTSAG 157
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDVPDP 182
+ G+++ +A Y R E+ A +++ + D+ +L I +L T PDP
Sbjct: 158 HVGMHINVAVAYGGRHELRDAFRSLLAEEAEKGTSLADLARTLEIDQIEDHLYTRGQPDP 217
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DLIIRT GE+RLS FL+WQ A+SEF F WPDF + F AL + R+RR+G
Sbjct: 218 DLIIRTSGEQRLSGFLMWQSAHSEFYFCEALWPDFRKVDFLRALRSFTQRERRYG 272
>gi|323454443|gb|EGB10313.1| hypothetical protein AURANDRAFT_58856 [Aureococcus anophagefferens]
Length = 223
Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 122/224 (54%), Gaps = 6/224 (2%)
Query: 18 MDGNGRWAAARGLP--RCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEI 75
MDGN R+ A R P R GH G E+V G+ +T FAFS NW R +E+
Sbjct: 1 MDGNRRFGAKRFGPARRLEGHAAGGRKLGEVVDWCLRAGVAEVTAFAFSTENWHRDSAEV 60
Query: 76 SELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS-LDDDILCVLKEAEDQTRL-NTGLNLF 133
+ L++ + ++ ++ V+ + L D+ L+ E +T + L L
Sbjct: 61 ALLMRTFVDQCSEILKHAREKRVRCDVLCTDATRLPADVRAALETLETETAFADAALTLH 120
Query: 134 IAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKR 193
+A +Y +R EI+RA + + + + +G + + DVD + + L PDL++RT GE+R
Sbjct: 121 LAVSYGARGEIARAARKLAERVAAGEMDAGDVDEASLGAALALR--SPPDLLVRTSGERR 178
Query: 194 LSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
LS+FLLWQ+AY+E VF+ ++WP+ + + F L++Y R RR+G
Sbjct: 179 LSNFLLWQMAYTELVFLDKHWPELAEDDFDAVLDEYARRQRRYG 222
>gi|296416580|ref|XP_002837953.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633847|emb|CAZ82144.1| unnamed protein product [Tuber melanosporum]
Length = 267
Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 134/245 (54%), Gaps = 18/245 (7%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+V ++ S P H+ +MDGN R+A + + GH G E + A + G+K +TI
Sbjct: 8 LVNALRQGSVPQHVAFVMDGNRRFARSNHIETVEGHNMGFEALAK--ALCYKAGVKVVTI 65
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++RP+ E++ L+++ K S L + + + +R++G+R L D+L +
Sbjct: 66 YAFSIENFKRPLHEVNALMEIAKIKLSQLCQHGELMDRYGASLRILGHRSLLRQDVLEAI 125
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNI-----FQDIESGSVCSHDVDSSLIAK 172
++A + T+ N L + F Y+SRDE++ AI++I DIES + I +
Sbjct: 126 EQATEMTKHNDKAILNVCFPYTSRDEMTTAIRDITATPGLMDIES-------ITEKTITQ 178
Query: 173 YLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFFHALNQYNL 231
++ TSD P DL++RT G +RLSDF++WQ ++ VF WP F F L + +
Sbjct: 179 HMFTSDCPPLDLLVRTSGVERLSDFMMWQCHQDTDIVFSDCLWPQFDIWKFLPILINWGV 238
Query: 232 RDRRF 236
+ R+
Sbjct: 239 KRRKL 243
>gi|328771204|gb|EGF81244.1| hypothetical protein BATDEDRAFT_10818 [Batrachochytrium
dendrobatidis JAM81]
Length = 294
Score = 135 bits (339), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 120/213 (56%), Gaps = 6/213 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +MDGN R+A L GH+ G + E + ++GIK +T++AFSI N++R
Sbjct: 37 PKHVAFVMDGNRRFAKRLHLQPSEGHQLGFKKLEETLDWCMKLGIKVVTVYAFSIENFKR 96
Query: 71 PVSEISELVKLIK----SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
P E+ L++L + F+ K ++K+ I +RVIG+ L + + + +T
Sbjct: 97 PKEEVDVLMELAERKFGEFVTKSDL-VQKHGISIRVIGDTKLLREPVYKAACKVTSETCN 155
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTG L I Y+S++EI A++ + Q ++SG V DV +I + L T + P D+++
Sbjct: 156 NTGAILNICCPYTSQNEILVAMQEVVQGVQSGKVLESDVCEKMIEQCLYTEECPPLDVLV 215
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIP-EYWPDFS 218
RT GE RLSDF+LWQ + P + WP+FS
Sbjct: 216 RTSGEARLSDFMLWQAGRDCLLHFPKKLWPEFS 248
>gi|50842050|ref|YP_055277.1| undecaprenyl pyrophosphate synthase [Propionibacterium acnes
KPA171202]
gi|289425871|ref|ZP_06427625.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes SK187]
gi|289426694|ref|ZP_06428422.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes J165]
gi|295130133|ref|YP_003580796.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes SK137]
gi|50839652|gb|AAT82319.1| undecaprenyl pyrophosphate synthase [Propionibacterium acnes
KPA171202]
gi|289153814|gb|EFD02521.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes SK187]
gi|289160020|gb|EFD08196.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes J165]
gi|291375726|gb|ADD99580.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes SK137]
gi|313764006|gb|EFS35370.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL013PA1]
gi|313771463|gb|EFS37429.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL074PA1]
gi|313791663|gb|EFS39781.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL110PA1]
gi|313802251|gb|EFS43477.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL110PA2]
gi|313808123|gb|EFS46597.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL087PA2]
gi|313811410|gb|EFS49124.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL083PA1]
gi|313812593|gb|EFS50307.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL025PA1]
gi|313818890|gb|EFS56604.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL046PA2]
gi|313820717|gb|EFS58431.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL036PA1]
gi|313822516|gb|EFS60230.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL036PA2]
gi|313825688|gb|EFS63402.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL063PA1]
gi|313828030|gb|EFS65744.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL063PA2]
gi|313830835|gb|EFS68549.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL007PA1]
gi|313839019|gb|EFS76733.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL086PA1]
gi|314915038|gb|EFS78869.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL005PA4]
gi|314918631|gb|EFS82462.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL050PA1]
gi|314920439|gb|EFS84270.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL050PA3]
gi|314925632|gb|EFS89463.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL036PA3]
gi|314932113|gb|EFS95944.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL067PA1]
gi|314954621|gb|EFS99027.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL027PA1]
gi|314958580|gb|EFT02682.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL002PA1]
gi|314959816|gb|EFT03918.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL002PA2]
gi|314962389|gb|EFT06490.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL082PA1]
gi|314968340|gb|EFT12439.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL037PA1]
gi|314973723|gb|EFT17819.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL053PA1]
gi|314976370|gb|EFT20465.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL045PA1]
gi|314979199|gb|EFT23293.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL072PA2]
gi|314983347|gb|EFT27439.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL005PA1]
gi|314986754|gb|EFT30846.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL005PA2]
gi|314989495|gb|EFT33586.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL005PA3]
gi|315077476|gb|EFT49536.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL053PA2]
gi|315080219|gb|EFT52195.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL078PA1]
gi|315084101|gb|EFT56077.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL027PA2]
gi|315085303|gb|EFT57279.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL002PA3]
gi|315089082|gb|EFT61058.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL072PA1]
gi|315096498|gb|EFT68474.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL038PA1]
gi|315100855|gb|EFT72831.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL046PA1]
gi|315107207|gb|EFT79183.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL030PA1]
gi|315108073|gb|EFT80049.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL030PA2]
gi|327326748|gb|EGE68531.1| undecaprenyl diphosphate synthase [Propionibacterium acnes
HL096PA2]
gi|327330555|gb|EGE72302.1| undecaprenyl diphosphate synthase [Propionibacterium acnes
HL096PA3]
gi|327331074|gb|EGE72814.1| undecaprenyl diphosphate synthase [Propionibacterium acnes
HL097PA1]
gi|327443051|gb|EGE89705.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL043PA1]
gi|327445174|gb|EGE91828.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL043PA2]
gi|327446892|gb|EGE93546.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL013PA2]
gi|327450155|gb|EGE96809.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL087PA3]
gi|327455118|gb|EGF01773.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL092PA1]
gi|327455288|gb|EGF01943.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL083PA2]
gi|328752568|gb|EGF66184.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL020PA1]
gi|328752821|gb|EGF66437.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL087PA1]
gi|328759256|gb|EGF72872.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL025PA2]
gi|328760257|gb|EGF73830.1| undecaprenyl diphosphate synthase [Propionibacterium acnes
HL099PA1]
gi|332674973|gb|AEE71789.1| undecaprenyl pyrophosphate synthase [Propionibacterium acnes 266]
Length = 273
Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 124/235 (52%), Gaps = 12/235 (5%)
Query: 11 PDHIGIIMDGNGRWAA--ARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ ++ DGN RWA A G P AG+ G + E VGI +T++ S +N
Sbjct: 42 PQHVAVLADGNRRWARLNAPGEPLVAGYEAGADRLREFCTWCDAVGIPIITLWVLSTDNL 101
Query: 69 RRP-VSEISELVKLIKSFLKKGFYSLKKNN-IKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
+R E+ L+K+I+S + SL N+ +V+ +G+ L DD+ L A +
Sbjct: 102 QRAETGELGPLLKVIESLVD----SLADNSRWRVQAVGDLDLLPDDMAESLCRAGRTSIG 157
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDVPDP 182
+ G+++ +A Y R E+ A +++ + D+ +L I +L T PDP
Sbjct: 158 HVGMHINVAVAYGGRHELRDAFRSLLAEEAEKGTSLADLARTLEIDQIEDHLYTRGQPDP 217
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DLIIRT GE+RLS FL+WQ A+SEF F WPDF + F AL + R+RR+G
Sbjct: 218 DLIIRTSGEQRLSGFLMWQSAHSEFYFCEALWPDFRKVDFLRALRSFTQRERRYG 272
>gi|254819722|ref|ZP_05224723.1| short-chain Z-isoprenyl diphosphate synthetase [Mycobacterium
intracellulare ATCC 13950]
Length = 264
Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 80/235 (34%), Positives = 125/235 (53%), Gaps = 7/235 (2%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S P HI ++ DGN RWA G + G+R G E++ E GI+ T++ S
Sbjct: 31 SELPRHIAVLCDGNRRWARDAGYDDVSYGYRMGAAKIAEMLRWCQEAGIEMTTVYLLSTE 90
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
N +R E++ L+++I +++ N VR +G+ L + L+ A + T +
Sbjct: 91 NLQRDPDELAGLIEIITDVVEE--ICAPANRWSVRTVGDLELLGEQPARRLRGAVESTPV 148
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDS---SLIAKYLDTSDVPDP 182
++ +A Y R EI A++++ +++ +G+ +D+ I++ L TS PDP
Sbjct: 149 VAPFHVNVAVGYGGRREIVDAVRSLLSKELANGATAEELIDTVTVDAISENLYTSGQPDP 208
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRT GE+RLS FLLWQ AYSE F +WP F R F AL Y+ R RR+G
Sbjct: 209 DLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRRVDFLRALRDYSQRHRRYG 263
>gi|320532420|ref|ZP_08033256.1| di-trans,poly-cis-decaprenylcistransferase-like protein
[Actinomyces sp. oral taxon 171 str. F0337]
gi|320135367|gb|EFW27479.1| di-trans,poly-cis-decaprenylcistransferase-like protein
[Actinomyces sp. oral taxon 171 str. F0337]
Length = 275
Score = 134 bits (338), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 134/263 (50%), Gaps = 29/263 (11%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ A + ++ P H+G+I+DGN RWA + G GH++G + E + A ++G++ +T+
Sbjct: 15 LAARIDPATVPHHVGVILDGNRRWAKSMGFGAAQGHKRGADKIEEFLGWAEQMGVQVVTL 74
Query: 61 FAFSINNWRRPVSEISELVKLIK----SFLKKGFYSLK------------KNNIKVRVIG 104
+ S +N R +E+S L+ +I + G +SL+ ++ V+
Sbjct: 75 WLLSTDNLSRDPAELSPLLDIIAHAVDELAETGRWSLRLVGAVDLLPEPLAERLRAAVVR 134
Query: 105 NRLSL------DDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESG 158
+R + D +K AE + R + + IA Y R EI+ A++ + ++ +
Sbjct: 135 SRPASAGASESDGAAGHAVKTAEVEDRR---MQVNIAVGYGGRQEIADAVRELLRERAAA 191
Query: 159 SVCSHDVDSSL----IAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYW 214
+V +SL I ++L T PDPDL+IRT GE+RLS FLLWQ +SE+ F W
Sbjct: 192 GASLEEVAASLSEEDITEHLYTKGQPDPDLVIRTSGEQRLSGFLLWQSVHSEYYFCEVNW 251
Query: 215 PDFSRELFFHALNQYNLRDRRFG 237
P F R F AL + R+RR G
Sbjct: 252 PAFRRVDFLRALRDFAGRERRLG 274
>gi|42559990|sp|Q8FQR4|UPPS1_COREF RecName: Full=Undecaprenyl pyrophosphate synthase 1; Short=UPP
synthase 1; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase 1;
AltName: Full=Undecaprenyl diphosphate synthase 1;
Short=UDS 1
Length = 256
Score = 134 bits (338), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 127/242 (52%), Gaps = 7/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLT 59
++ + + P H+ I+ DGN RWA G + GHR G + E+V +V + +T
Sbjct: 16 LLKELNGARQPGHVAIMCDGNRRWAREAGFVDLSHGHRVGAKKIGELVRWCDDVDVDLVT 75
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++ S N R +E+ L +I + + SL + N +VR++G+ L + L+
Sbjct: 76 VYLLSTENLGRDEAELQLLYDIIGDVVAE--LSLPETNCRVRLVGHLDLLPKEFAERLRG 133
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI-ESGSVCSH---DVDSSLIAKYLD 175
+T +TG+ + IA Y R EI A++++ + G VD+ I+ +L
Sbjct: 134 TVCETVDHTGVAVNIAVGYGGRQEIVDAVRDLLTSARDEGKTLDEVIESVDAQAISTHLY 193
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
TS PDPDL+IRT GE+RLS F+LWQ AYSE F YWP F R F AL Y+ R RR
Sbjct: 194 TSGQPDPDLVIRTSGEQRLSGFMLWQSAYSEIWFTDTYWPAFRRIDFLRALRDYSQRSRR 253
Query: 236 FG 237
FG
Sbjct: 254 FG 255
>gi|259506987|ref|ZP_05749887.1| undecaprenyl diphosphate synthase [Corynebacterium efficiens
YS-314]
gi|259165439|gb|EEW49993.1| undecaprenyl diphosphate synthase [Corynebacterium efficiens
YS-314]
Length = 269
Score = 134 bits (338), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 127/242 (52%), Gaps = 7/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLT 59
++ + + P H+ I+ DGN RWA G + GHR G + E+V +V + +T
Sbjct: 29 LLKELNGARQPGHVAIMCDGNRRWAREAGFVDLSHGHRVGAKKIGELVRWCDDVDVDLVT 88
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++ S N R +E+ L +I + + SL + N +VR++G+ L + L+
Sbjct: 89 VYLLSTENLGRDEAELQLLYDIIGDVVAE--LSLPETNCRVRLVGHLDLLPKEFAERLRG 146
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI-ESGSVCSH---DVDSSLIAKYLD 175
+T +TG+ + IA Y R EI A++++ + G VD+ I+ +L
Sbjct: 147 TVCETVDHTGVAVNIAVGYGGRQEIVDAVRDLLTSARDEGKTLDEVIESVDAQAISTHLY 206
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
TS PDPDL+IRT GE+RLS F+LWQ AYSE F YWP F R F AL Y+ R RR
Sbjct: 207 TSGQPDPDLVIRTSGEQRLSGFMLWQSAYSEIWFTDTYWPAFRRIDFLRALRDYSQRSRR 266
Query: 236 FG 237
FG
Sbjct: 267 FG 268
>gi|25027611|ref|NP_737665.1| putative undecaprenyl diphosphate synthase [Corynebacterium
efficiens YS-314]
gi|23492893|dbj|BAC17865.1| putative undecaprenyl diphosphate synthase [Corynebacterium
efficiens YS-314]
Length = 304
Score = 134 bits (338), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 127/242 (52%), Gaps = 7/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLT 59
++ + + P H+ I+ DGN RWA G + GHR G + E+V +V + +T
Sbjct: 64 LLKELNGARQPGHVAIMCDGNRRWAREAGFVDLSHGHRVGAKKIGELVRWCDDVDVDLVT 123
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++ S N R +E+ L +I + + SL + N +VR++G+ L + L+
Sbjct: 124 VYLLSTENLGRDEAELQLLYDIIGDVVAE--LSLPETNCRVRLVGHLDLLPKEFAERLRG 181
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI-ESGSVCSH---DVDSSLIAKYLD 175
+T +TG+ + IA Y R EI A++++ + G VD+ I+ +L
Sbjct: 182 TVCETVDHTGVAVNIAVGYGGRQEIVDAVRDLLTSARDEGKTLDEVIESVDAQAISTHLY 241
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
TS PDPDL+IRT GE+RLS F+LWQ AYSE F YWP F R F AL Y+ R RR
Sbjct: 242 TSGQPDPDLVIRTSGEQRLSGFMLWQSAYSEIWFTDTYWPAFRRIDFLRALRDYSQRSRR 301
Query: 236 FG 237
FG
Sbjct: 302 FG 303
>gi|312438360|gb|ADQ77431.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus TCH60]
Length = 164
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 96/159 (60%)
Query: 84 SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDE 143
+FLK L + N+KV IG L + + A+++T NTGL L A NY R E
Sbjct: 6 NFLKTFLPELIEKNVKVETIGFTDKLPKSTIEAINNAKEKTANNTGLKLIFAINYGGRAE 65
Query: 144 ISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVA 203
+ +IKN+F ++ + S +D + I +L T D PDP+L+IRT GE+R+S+FL+WQV+
Sbjct: 66 LVHSIKNMFDELHQQGLNSDIIDETYINNHLMTKDYPDPELLIRTSGEQRISNFLIWQVS 125
Query: 204 YSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
YSEF+F + WPDF + + Y R RRFGGLS++
Sbjct: 126 YSEFIFNQKLWPDFDEDELIKCIKIYQSRQRRFGGLSEE 164
>gi|329948136|ref|ZP_08295008.1| di-trans,poly-cis-decaprenylcistransferase-like protein
[Actinomyces sp. oral taxon 170 str. F0386]
gi|328522869|gb|EGF49974.1| di-trans,poly-cis-decaprenylcistransferase-like protein
[Actinomyces sp. oral taxon 170 str. F0386]
Length = 268
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 127/257 (49%), Gaps = 24/257 (9%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ A + ++ P H+G+I+DGN RWA + G GH++G + E + A + G++ +T+
Sbjct: 15 LAARIDPATVPHHVGVILDGNRRWAKSMGFGAAQGHKRGADKIEEFLGWAEQTGVEVVTL 74
Query: 61 FAFSINNWRRPVSEISELVKLIK----SFLKKGFYSLK------------KNNIKVRVIG 104
+ S +N R +E+S L+ +I + G +SL+ ++ V
Sbjct: 75 WLLSTDNLSRDPAELSPLLDIIAHAVDELAETGRWSLRLVGAVDLLPEPLAERLRAAVAK 134
Query: 105 NRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD 164
+R + K A + R+ IA Y R EI+ A++ + ++ + +
Sbjct: 135 SRPEAAEAGEGAGKVAGEDRRMQVN----IAVGYGGRQEIADAVRELLRERAAAGASLEE 190
Query: 165 VDSSL----IAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRE 220
V +SL I +L T PDPDL+IRT GE+RLS FLLWQ +SE+ F WP F R
Sbjct: 191 VAASLSEEDITDHLYTKGQPDPDLVIRTSGEQRLSGFLLWQSVHSEYYFCEVNWPAFRRV 250
Query: 221 LFFHALNQYNLRDRRFG 237
F AL + R+RR G
Sbjct: 251 DFLRALRDFASRERRLG 267
>gi|219850791|ref|YP_002465223.1| undecaprenyl diphosphate synthase [Methanosphaerula palustris
E1-9c]
gi|219545050|gb|ACL15500.1| undecaprenyl diphosphate synthase [Methanosphaerula palustris
E1-9c]
Length = 256
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 128/236 (54%), Gaps = 13/236 (5%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI II DGN R+A G+ GHR G ++ +++ A ++G++++T+++FS N+ R
Sbjct: 23 PRHIAIIQDGNRRFARKIGVDTAVGHRAGADITEQMLEWAGDLGVQHITLYSFSTENFHR 82
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKN------NIKVRVIGNRLSLDDDILCVLKEAEDQT 124
SE+ EL L ++ F S+ KN +I+V+++G+R L D+L +++AE T
Sbjct: 83 DASEVQELFDL----FREKFLSMVKNERVHRRHIRVQMVGDRTLLPSDLLAAIEQAEAST 138
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYL-DTSDVPDPD 183
L IA Y R+EI +A K I +++ G++ + +++ +L + + +P D
Sbjct: 139 AGYHDFFLNIAIAYGGRNEIVQAAKRILAEVKDGTLAPEAITPAMVENHLYEGNPLPPVD 198
Query: 184 LIIRTGGEKRLSDFLLWQVAYSE--FVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
LIIRTG E R S+FL W +E F YWP F + A+ Y R+ G
Sbjct: 199 LIIRTGNEYRTSNFLPWLANGNECAVYFCAPYWPLFRKIDLLRAIRVYQQRNEPMG 254
>gi|330506565|ref|YP_004382993.1| di-trans,poly-cis-decaprenylcistransferase [Methanosaeta concilii
GP-6]
gi|328927373|gb|AEB67175.1| di-trans,poly-cis-decaprenylcistransferase [Methanosaeta concilii
GP-6]
Length = 259
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 128/243 (52%), Gaps = 15/243 (6%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + +++ SP +HI II DGN R+A +GL + GH G E + EVG+++LT+
Sbjct: 17 LKSQILAGSPVEHIAIIQDGNRRYARQKGLAKTLGHSLGAETSERVSDWCLEVGVRHLTL 76
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKK------NNIKVRVIGNRLSLDDDIL 114
+AFS N+ R SE + LI KK F L+ N ++VR IG L DD+
Sbjct: 77 YAFSTENFSREDSEKRYIFDLI----KKKFNELRNSKKIHFNRVRVRAIGRLEMLPDDLQ 132
Query: 115 CVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYL 174
++ E+ T+ + L +A Y + E+ A +++ +E G + S D+D ++IA++L
Sbjct: 133 EEIRLTEEATKDYKKMYLNVALAYGGQRELVDAARSLAHLVEEGRIRSKDLDETIIAQHL 192
Query: 175 DTSD---VPDPDLIIRTGGEKRLSDFLLWQVAYSEFV--FIPEYWPDFSRELFFHALNQY 229
D VP DLIIRT G+ R S+FL WQ +E F +WP+F + F A+
Sbjct: 193 YPQDGISVPKVDLIIRTAGDFRTSNFLPWQANGNECAAYFCAPFWPEFRKIDFLRAIRTA 252
Query: 230 NLR 232
R
Sbjct: 253 QTR 255
>gi|317155471|ref|XP_001825131.2| hypothetical protein AOR_1_268074 [Aspergillus oryzae RIB40]
Length = 297
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 122/232 (52%), Gaps = 7/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IMDGN R+A G+P GH G E + +V A G+K +T++AFS+ N++R
Sbjct: 20 PQHIAFIMDGNRRYAKGHGIPTAKGHYLGAEAMSNVVEACFLSGVKGVTVYAFSLENFKR 79
Query: 71 PVSEISELVKLIK----SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
P EI +L+ L K K G + ++ + +RV+G LD+D+ +L++ TR
Sbjct: 80 PKEEIVQLMNLFKFQIYELCKPGGLA-ERFQVSIRVLGQLDLLDEDLKALLRQIMVDTRN 138
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
TG + Y+SRDEI A+ + + S D+ ++ +Y+ T+D P D+++
Sbjct: 139 RTGGFINCCVAYTSRDEIVTAMSRAVRSSQLKH-SSADITDEVLTRYMYTADDPAVDVLV 197
Query: 187 RTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT G RLSDFLLWQ ++ + WP+F F + ++ + G
Sbjct: 198 RTSGVSRLSDFLLWQCHEDTDIQIVDAMWPEFGIYHLFLVIVRWQRKQMNIG 249
>gi|50285867|ref|XP_445362.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524666|emb|CAG58268.1| unnamed protein product [Candida glabrata]
Length = 274
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 120/218 (55%), Gaps = 10/218 (4%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+S+ P HIG IMDGN R+A + + GH G ++I+ E G+ T+FAFSI
Sbjct: 23 VSNCVPRHIGFIMDGNRRYAKKKQMESKEGHEAGFRSMSKILELCYEAGVDTATVFAFSI 82
Query: 66 NNWRRPVSEISELVKL----IKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
N++R E+ ++ L I+ + G + +K +++RVIG+ LD D+L +K
Sbjct: 83 ENFKRSAYEVDAIMSLARERIRQIREHGELA-QKYGVRIRVIGDISLLDKDLLKEIKNTM 141
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ TR NT L I Y+ R+EI ++K + D S S ++ +I ++L T+ P
Sbjct: 142 ELTRNNTRATLNICMPYTGREEIYHSMKTVLDD---DSYSSKNISEEIIDEHLYTAGQPP 198
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFV--FIPEYWPDF 217
DL+IRT G RLSDF+LWQ ++ + FI WP+F
Sbjct: 199 LDLLIRTSGVTRLSDFMLWQTCSNDVMIEFIDCLWPEF 236
>gi|83773873|dbj|BAE63998.1| unnamed protein product [Aspergillus oryzae]
Length = 273
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 122/232 (52%), Gaps = 7/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IMDGN R+A G+P GH G E + +V A G+K +T++AFS+ N++R
Sbjct: 33 PQHIAFIMDGNRRYAKGHGIPTAKGHYLGAEAMSNVVEACFLSGVKGVTVYAFSLENFKR 92
Query: 71 PVSEISELVKLIK----SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
P EI +L+ L K K G + ++ + +RV+G LD+D+ +L++ TR
Sbjct: 93 PKEEIVQLMNLFKFQIYELCKPGGLA-ERFQVSIRVLGQLDLLDEDLKALLRQIMVDTRN 151
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
TG + Y+SRDEI A+ + + S D+ ++ +Y+ T+D P D+++
Sbjct: 152 RTGGFINCCVAYTSRDEIVTAMSRAVRSSQLKH-SSADITDEVLTRYMYTADDPAVDVLV 210
Query: 187 RTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT G RLSDFLLWQ ++ + WP+F F + ++ + G
Sbjct: 211 RTSGVSRLSDFLLWQCHEDTDIQIVDAMWPEFGIYHLFLVIVRWQRKQMNIG 262
>gi|41408801|ref|NP_961637.1| hypothetical protein MAP2703c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|118463939|ref|YP_880457.1| short chain Z-isoprenyl diphosphate synthetase [Mycobacterium avium
104]
gi|41397160|gb|AAS05020.1| hypothetical protein MAP_2703c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|118165226|gb|ABK66123.1| short-chain Z-isoprenyl diphosphate synthetase [Mycobacterium avium
104]
Length = 264
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 124/232 (53%), Gaps = 7/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI ++ DGN RWA G + G+R G E++ GI+ T++ S N +
Sbjct: 34 PRHIAVLCDGNRRWARDAGYDDVSYGYRMGAVKIAEMLRWCQAAGIEMTTVYLLSTENLQ 93
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E++ L+++I +++ N VR +G+ L ++ L+ A + T +
Sbjct: 94 RDPDELAGLIEIITDVVEE--ICAPANRWSVRTVGDLELLGEEPARRLRGAVESTPVEAS 151
Query: 130 LNLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDS---SLIAKYLDTSDVPDPDLI 185
++ +A Y R EI A++++ +++ +G+ +D+ I++ L TS PDPDL+
Sbjct: 152 FHVNVAVGYGGRREIVDAVRSLLSKELANGATAEELIDAVTVDAISENLYTSGQPDPDLV 211
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRT GE+RLS FLLWQ AYSE F +WP F R F AL Y+ R RR+G
Sbjct: 212 IRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRRVDFLRALRDYSQRHRRYG 263
>gi|145593421|ref|YP_001157718.1| undecaprenyl diphosphate synthase [Salinispora tropica CNB-440]
gi|145302758|gb|ABP53340.1| Undecaprenyl pyrophosphate synthetase [Salinispora tropica CNB-440]
Length = 256
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 125/243 (51%), Gaps = 8/243 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARG-LPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ A + P H+G++ DGN RWA G + GHR G E E++ G+ ++T
Sbjct: 15 LTAKLAGKPVPRHVGVMCDGNRRWAREMGFVDPNDGHRVGAERIKELLRWCDAAGVGHVT 74
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++ S +N RP +++ L+++I+ + + + N ++R++G L LK
Sbjct: 75 LWLLSTDNLTRPAAQLDPLLQIIEDLTSE--LAEEANPWRLRMVGALDVLPAQHAAALKA 132
Query: 120 AEDQTRLNTG-LNLFIAFNYSSRDEISRAIKNIFQDIESGSVC----SHDVDSSLIAKYL 174
A ++TR G + IA Y R EI+ ++++ + + D I ++L
Sbjct: 133 AAERTRDRVGGAQVNIAVGYGGRREIADSVRSFLHEHAKAGTSIEQLAETFDVEHITEHL 192
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
T +PDPDLIIRT GE+R+S FLLWQ +SEF F WP+F R F AL Y R R
Sbjct: 193 YTRGLPDPDLIIRTSGEQRMSGFLLWQSVHSEFYFCELNWPEFRRVDFLRALRSYATRQR 252
Query: 235 RFG 237
RFG
Sbjct: 253 RFG 255
>gi|239990965|ref|ZP_04711629.1| putative undecaprenyl pyrophosphate synthetase [Streptomyces
roseosporus NRRL 11379]
Length = 260
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 127/244 (52%), Gaps = 11/244 (4%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ A+++ P H+GI++DGN RWA G G+R G + GI+++T
Sbjct: 20 LAATLVGLPRPQHVGIMVDGNRRWARKAGHTDVREGYRAGGAKVTTFLGWCTAAGIEHVT 79
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
+F S +N RP E+ L+++I+ ++ + + + +VR IG+ L VLKE
Sbjct: 80 LFMLSDDNLGRPAEELGPLIEVIEETVRD--ITAEGRDWEVRAIGSLDMLPGSSARVLKE 137
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD-IESGS-----VCSHDVDSSLIAKY 173
A T GL + +A Y R EI A+K+ F++ I +G V +D I+++
Sbjct: 138 ATAATTGRGGLKVDVAVGYGGRREIVDAVKSAFEEHIAAGGDPAELVARFGIDD--ISRH 195
Query: 174 LDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
L + D IIRT GE+RLS FLLWQ AY+E ++ YWP F F AL Y R+
Sbjct: 196 LYSPVADHTDFIIRTSGEQRLSGFLLWQSAYAEMHWVDCYWPAFRHVDFLRALRSYANRE 255
Query: 234 RRFG 237
RRFG
Sbjct: 256 RRFG 259
>gi|240170280|ref|ZP_04748939.1| short (C15) chain Z-isoprenyl diphosphate synthase, UppS
[Mycobacterium kansasii ATCC 12478]
Length = 262
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 126/235 (53%), Gaps = 7/235 (2%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S P HI ++ DGN RWA + G + G+R G E++ + GI+ T++ S
Sbjct: 29 SELPRHIAVLCDGNRRWARSAGYEDVSYGYRMGAAKIAEMLRWCQDAGIEMTTVYLLSTE 88
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
N +R E++ L+++I +++ N VR +G+ + ++ +++A + T
Sbjct: 89 NLQRDPDELAGLIEIITDVVEE--ICAPANRWSVRTVGDLGLIGEEPARRVRDAVESTPE 146
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDSSL---IAKYLDTSDVPDP 182
++ +A Y R EI A++ + +++ +G+ VD+ I++ L TS PDP
Sbjct: 147 TASFHVNVAVGYGGRREIVDAVRALLSKELANGASAEELVDAVTEDGISENLYTSGQPDP 206
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRT GE+RLS FLLWQ AYSE F +WP F R F AL Y+ R RR+G
Sbjct: 207 DLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRRVDFLRALRDYSQRHRRYG 261
>gi|313833263|gb|EFS70977.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL056PA1]
Length = 273
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 123/235 (52%), Gaps = 12/235 (5%)
Query: 11 PDHIGIIMDGNGRWAA--ARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ ++ DG RWA A G P AG+ G + E VGI +T++ S +N
Sbjct: 42 PQHVAVLADGTRRWARLNAPGEPLVAGYEAGADRLREFCTWCDAVGIPIITLWVLSTDNL 101
Query: 69 RRP-VSEISELVKLIKSFLKKGFYSLKKNN-IKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
+R E+ L+K+I+S + SL N+ +V+ +G+ L DD+ L A +
Sbjct: 102 QRAETGELGPLLKVIESLVD----SLADNSRWRVQAVGDLDLLPDDMAESLCRAGRTSIG 157
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDVPDP 182
+ G+++ +A Y R E+ A +++ + D+ +L I +L T PDP
Sbjct: 158 HVGMHINVAVAYGGRHELRDAFRSLLAEEAEKGTSLADLARTLEIDQIEDHLYTRGQPDP 217
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DLIIRT GE+RLS FL+WQ A+SEF F WPDF + F AL + R+RR+G
Sbjct: 218 DLIIRTSGEQRLSGFLMWQSAHSEFYFCEALWPDFRKVDFLRALRSFTQRERRYG 272
>gi|156377922|ref|XP_001630894.1| predicted protein [Nematostella vectensis]
gi|156217924|gb|EDO38831.1| predicted protein [Nematostella vectensis]
Length = 296
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 111/226 (49%), Gaps = 36/226 (15%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ S P H+ IIMDGN R+A R GH KG E E++ E+GI +T++AFS
Sbjct: 21 LKSGEIPKHVAIIMDGNRRFAKKVNCERSKGHEKGFEKLTEVLEWCFELGIPEVTVYAFS 80
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
I N++R E+ L++L K R++ R L+
Sbjct: 81 IENFKRSKDEVECLMELAKQKFD-------------RLLEERHVLN-------------- 113
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ Y+SR EI AIK + + +E G++ D+ +++ + L T P+PDL
Sbjct: 114 ---------VCMAYTSRHEICEAIKTMAKAVEDGALKPMDISENVLDQCLYTHQSPEPDL 164
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
+IRT GE R SDFLLWQ +Y+ F+ WP+FS F+ A+ Y
Sbjct: 165 LIRTSGEVRFSDFLLWQCSYTSLSFLKVLWPEFSVWNFYSAILSYQ 210
>gi|125983160|ref|XP_001355345.1| GA10557 [Drosophila pseudoobscura pseudoobscura]
gi|195169447|ref|XP_002025533.1| GL15247 [Drosophila persimilis]
gi|54643659|gb|EAL32402.1| GA10557 [Drosophila pseudoobscura pseudoobscura]
gi|194109012|gb|EDW31055.1| GL15247 [Drosophila persimilis]
Length = 303
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 125/227 (55%), Gaps = 5/227 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +MDGN R+A ++ + + GH +G + + ++GI +T FAFSI N++R
Sbjct: 27 PKHVAFVMDGNRRFARSQQIDKIEGHSRGFSKLADCLRWCLDLGINEVTTFAFSIENFKR 86
Query: 71 PVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
E+ L L + + L K L ++ I++RVIGN L D+ ++ A T +N
Sbjct: 87 SSEEVEGLFNLARDKFAKLLKETDRLNQHGIRIRVIGNIGLLPLDLQELVATAMLSTEVN 146
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L L +AF+Y+SRDEI++A++ + Q S + ++ L+ + + T P PDLI R
Sbjct: 147 DKLFLNVAFSYTSRDEITQALETVLQQGNSF-ISGSNISERLLEECMYTRHSPAPDLIFR 205
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
T GE RLSDF++WQ++ S F WP + F ++ Y RDR
Sbjct: 206 TSGETRLSDFMMWQLSGSVLYFSNVLWPQITFWNFLASILAYQ-RDR 251
>gi|134074493|emb|CAK38787.1| unnamed protein product [Aspergillus niger]
Length = 296
Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 124/236 (52%), Gaps = 6/236 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+V ++ P HI +MDGN R+A G+ GH G E I+ + G+K +TI
Sbjct: 31 LVGAIRQGPVPQHIAFVMDGNRRFARTHGIETVEGHNMGFEALARILEVCYKSGVKVVTI 90
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+++ + S + + L + KVR++G L D+L +
Sbjct: 91 YAFSIENFKRSKFEVDALMEMARVKLSQMAQHGEILDRYGAKVRILGRLDLLRPDVLAAV 150
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
A + T N L I F Y+SRDEI+ A+++ D+ S + ++++L T
Sbjct: 151 NRAVEMTSNNGDCVLNICFPYTSRDEITTAVRDTVADLVFMS--PETITRQTLSEHLFTH 208
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFFHALNQYNLR 232
D P DL++RT G +RLSDF+LWQ +E VF+ WPDF F + ++ R
Sbjct: 209 DNPPLDLLVRTSGVERLSDFMLWQCHEDTEIVFLDVLWPDFDLWQFLPVMLRWQRR 264
>gi|326772301|ref|ZP_08231586.1| undecaprenyl diphosphate synthase [Actinomyces viscosus C505]
gi|326638434|gb|EGE39335.1| undecaprenyl diphosphate synthase [Actinomyces viscosus C505]
Length = 275
Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 130/260 (50%), Gaps = 23/260 (8%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ A + ++ P H+G+I+DGN RWA + G GH++G + E + A ++G++ +T+
Sbjct: 15 LAARIDPATVPHHVGVILDGNRRWAKSMGFGAAQGHKRGADKIEEFLGWAEQMGVQVVTL 74
Query: 61 FAFSINNWRRPVSEISELVKLIK----SFLKKGFYSLK------------KNNIKVRVIG 104
+ S +N R +E+S L+ +I + G +SL+ ++ V+
Sbjct: 75 WLLSTDNLSRDPAELSPLLDIIAHAVDELAETGRWSLRLVGAVDLLPEPLAERLRAAVVR 134
Query: 105 NRLSLDDDILCVLKEAEDQTRLNTG---LNLFIAFNYSSRDEISRAIKNIFQDIESGSVC 161
+R + + E G + + IA Y R EI+ A++ + ++ +
Sbjct: 135 SRPTSAEASEQGGPAGEAAKVAEAGDRRMQVNIAVGYGGRQEIADAVRELLRERAAAGAS 194
Query: 162 SHDVDSSL----IAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDF 217
+V +SL I ++L T PDPDL+IRT GE+RLS FLLWQ +SE+ F WP F
Sbjct: 195 LEEVAASLSEEDITEHLYTKGQPDPDLVIRTSGEQRLSGFLLWQSVHSEYYFCEVNWPAF 254
Query: 218 SRELFFHALNQYNLRDRRFG 237
R F AL + R+RR G
Sbjct: 255 RRVDFLRALRDFASRERRLG 274
>gi|309804276|ref|ZP_07698353.1| putative di-trans,poly-cis-decaprenylcistransferase [Lactobacillus
iners LactinV 11V1-d]
gi|308163679|gb|EFO65949.1| putative di-trans,poly-cis-decaprenylcistransferase [Lactobacillus
iners LactinV 11V1-d]
Length = 161
Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/146 (47%), Positives = 91/146 (62%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
DH+ IIMDGNGRWA R LPR GHR G+ EI A E+G+K LT++AFS NW RP
Sbjct: 9 DHLAIIMDGNGRWAQERHLPRIIGHRSGMNKVKEIALVANELGVKVLTLYAFSTENWGRP 68
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E++ L+KL +F K L+KNNIKV ++G L ++K+AE +T N G+
Sbjct: 69 RDEVNYLMKLPINFFDKFMPELQKNNIKVNIMGFNDKLPLATAEIIKKAEQETADNDGMI 128
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIES 157
L AFNY SR EI+ AI I DI++
Sbjct: 129 LNFAFNYGSRQEITAAISKIALDIQN 154
>gi|330835760|ref|YP_004410488.1| undecaprenyl pyrophosphate synthetase [Metallosphaera cuprina Ar-4]
gi|329567899|gb|AEB96004.1| undecaprenyl pyrophosphate synthetase [Metallosphaera cuprina Ar-4]
Length = 255
Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 118/235 (50%), Gaps = 13/235 (5%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW-R 69
P+H+GII DGN RWA + G + E++ ++ +KN+T+FA S N +
Sbjct: 27 PNHVGIIPDGNRRWARYNNFSVNEAYMMGYKKLREVLIWLLDLNVKNVTVFALSTENCTK 86
Query: 70 RPVSEISELVKLIKSFLKKGFYSL------KKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
R +E+ +I ++KKG + K ++VR IG +D+ + E +
Sbjct: 87 RTKTELD----IIMGYIKKGIKEMISEEFIDKYEVRVRAIGKLEMTSEDLRSTVNEVMTR 142
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
+ + L +A Y R EI A+ + +D E G + + + KY ++ D D
Sbjct: 143 SSIYDKRKLTLAICYGGRQEILDAVSRMLKDFEKGDI--NTISEQDFRKYFYDEELEDID 200
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L+IRT GE R+S+FLLW +AYSE F YWPDF + + A+ Y R RR+G
Sbjct: 201 LVIRTSGEMRISNFLLWHLAYSELFFCEAYWPDFRKIDLWRAIRAYQKRARRYGA 255
>gi|315616342|gb|EFU96960.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli 3431]
Length = 231
Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 117/210 (55%), Gaps = 10/210 (4%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++AFS NW RP
Sbjct: 19 HVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPA 78
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+S L++L L SL ++N+++R+IG+ + + ++++E T NTGL L
Sbjct: 79 QEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTL 138
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA NY R +I + ++ + + ++ G++ +D ++ +++ ++ DL+IRTGG
Sbjct: 139 NIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGS- 197
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELF 222
+A F F P+F+ ++F
Sbjct: 198 ---------IALVTFCFGKLPMPNFTLQMF 218
>gi|224004994|ref|XP_002296148.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209586180|gb|ACI64865.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 240
Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 116/229 (50%), Gaps = 2/229 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGN R+ + GH G + E GI+ LT++AFS NW R
Sbjct: 11 PRHVAVIMDGNRRYGKQKYGNATRGHWDGSKTLIEFSKWCIAEGIETLTVYAFSTENWDR 70
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS-LDDDILCVLKEAEDQTRLNTG 129
+E+S L+ + + ++ I++RV+ + D+ + QT T
Sbjct: 71 DPAEVSALMSIFCKYCEELRVEAINRGIRIRVLATEEDRIPKDVQEGIGRMVSQTEHCTN 130
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ I +Y +R EI A K+I +++SG + + + + + + T DPD+IIRT
Sbjct: 131 FTMNICLSYGARGEIVNACKSIAMEVKSGQLDVNAIGEKELQQKMLTEHCRDPDVIIRTS 190
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQY-NLRDRRFG 237
GE+RLS+FLLWQ AYSE F+ + WP+ +E + + R RR+G
Sbjct: 191 GEERLSNFLLWQAAYSELFFLKKQWPELQKEDLLEVIRTFAQGRKRRYG 239
>gi|332796574|ref|YP_004458074.1| undecaprenyl diphosphate synthase [Acidianus hospitalis W1]
gi|332694309|gb|AEE93776.1| undecaprenyl diphosphate synthase [Acidianus hospitalis W1]
Length = 257
Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 126/242 (52%), Gaps = 10/242 (4%)
Query: 4 SMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ + S P P H+GII DGN RWA + +G + E++ AE+G+K++T+FA
Sbjct: 19 NQIKSGPIPRHVGIIPDGNRRWARENNSSFNEAYLQGYKKLKEVLIWLAELGVKDVTVFA 78
Query: 63 FSINNW-RRPVSEISELVKLIK----SFLKKGFYSLKKNNIKVRVIGNRLSLDDDI-LCV 116
S N +R E+S ++K IK L + + + K +KVR IG L +D+ L +
Sbjct: 79 LSTENCGKRSSQELSVILKYIKMGIDDLLTEDY--IYKYKVKVRAIGQLHKLPEDLRLSI 136
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT 176
+ E + N +L +A Y R EI A+ + + + G + ++ KY
Sbjct: 137 SRVVEKSSSFNER-SLTLAICYGGRQEILDAVAKLLDEYKKGLIKDIVLNEETFRKYFYD 195
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
++ D DL+IRT GE R+S+FLLW +AYSE F YWP+F + + A+ Y R R F
Sbjct: 196 KELEDIDLVIRTSGEMRISNFLLWHLAYSELFFCDAYWPEFRKIDLWRAIRSYQRRKRNF 255
Query: 237 GG 238
G
Sbjct: 256 GA 257
>gi|298676135|ref|YP_003727884.1| undecaprenyl diphosphate synthase [Methanohalobium evestigatum
Z-7303]
gi|298289123|gb|ADI75088.1| undecaprenyl diphosphate synthase [Methanohalobium evestigatum
Z-7303]
Length = 284
Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 127/241 (52%), Gaps = 10/241 (4%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGN R+A G GH+ G + +++ A E+GI+ +T++AFS N+ R
Sbjct: 27 PKHVAIIMDGNRRYAKNMGKAGYYGHKLGSDTTEKVIEWACEIGIEEMTVYAFSTENFSR 86
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNN--IKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
P E +L +LI + L + + +N +K+R +G+R L + ++ AE T
Sbjct: 87 PPEETEKLFELIDTRLNEMVEDERTHNRQMKIRAVGDRKRLPQYLQDSIERAEKATCHYE 146
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYL---DTSDVPDPDLI 185
L +A Y R +I +A++ I + ++ G + V+ S I+ +L V D D+I
Sbjct: 147 NFKLNVALAYGGRQDIIQAVQEIARKVKRGDLTVEKVNESTISNHLYPDCEQPVSDVDMI 206
Query: 186 IRTGGEKRLSDFLLWQVAYSEFV--FIPEYWPDFSRELFFHALNQYNLR---DRRFGGLS 240
+RTGG +R+S+FL WQ +E F YWP F + F A+ Y R + +G LS
Sbjct: 207 VRTGGNERVSNFLPWQANGNECTAYFCAPYWPMFRKIDFLRAIRVYQARLTKKKGYGRLS 266
Query: 241 K 241
+
Sbjct: 267 R 267
>gi|254774094|ref|ZP_05215610.1| short-chain Z-isoprenyl diphosphate synthetase [Mycobacterium avium
subsp. avium ATCC 25291]
Length = 264
Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 124/232 (53%), Gaps = 7/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI ++ DGN RWA G + G+R G E++ GI+ T++ S N +
Sbjct: 34 PRHIAVLCDGNRRWARDAGYDDVSYGYRMGAVKIAEMLRWCQAAGIEMTTVYLLSTENLQ 93
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E++ L+++I +++ N VR +G+ L ++ L+ A + T +
Sbjct: 94 RDPDELAGLIEIITDVVEE--ICAPANRWSVRTVGDLELLGEEPARRLRGAVESTPVEAS 151
Query: 130 LNLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDS---SLIAKYLDTSDVPDPDLI 185
++ +A Y R EI A++++ +++ +G+ +++ I++ L TS PDPDL+
Sbjct: 152 FHVNVAVGYGGRREIVDAVRSLLSKELANGATAEELIEAVTVDAISENLYTSGQPDPDLV 211
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRT GE+RLS FLLWQ AYSE F +WP F R F AL Y+ R RR+G
Sbjct: 212 IRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRRVDFLRALRDYSQRHRRYG 263
>gi|296169955|ref|ZP_06851562.1| undecaprenyl diphosphate synthase [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295895359|gb|EFG75065.1| undecaprenyl diphosphate synthase [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 262
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 124/232 (53%), Gaps = 7/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI ++ DGN RWA G + G+R G E++ E GI+ T++ S N +
Sbjct: 32 PRHIAVLCDGNRRWARDAGYTDVSYGYRMGAAKIAEMLRWCQEAGIEMTTVYLLSTENLQ 91
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E++ L+++I +++ N VR +G+ L ++ L+ A + T +
Sbjct: 92 RDPDELAGLIEIITDVVEE--ICAPANRWSVRTVGDLELLGEEPARRLRGAVESTPVVAP 149
Query: 130 LNLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDSSL---IAKYLDTSDVPDPDLI 185
++ +A Y R EI A++ + +++ +G+ +++ I++ L TS PDPDL+
Sbjct: 150 FHVNVAVGYGGRREIVDAVRALLSKELANGASAEELIEAVTVDGISENLYTSGQPDPDLV 209
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRT GE+RLS FLLWQ AYSE F +WP F R F AL Y+ R RR+G
Sbjct: 210 IRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRRVDFLRALRDYSQRHRRYG 261
>gi|215410698|ref|ZP_03419506.1| Short (C15) chain Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis 94_M4241A]
gi|298524583|ref|ZP_07011992.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis 94_M4241A]
gi|298494377|gb|EFI29671.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis 94_M4241A]
Length = 262
Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 124/233 (53%), Gaps = 7/233 (3%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HI ++ DGN RWA + G + G+R G E++ E GI+ T++ S N
Sbjct: 31 PARHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWCHEAGIELATVYLLSTENL 90
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+R E++ L+++I +++ N+ VR +G+ + ++ L+ A + T
Sbjct: 91 QRDPDELAALIEIITDVVEE--ICAPANHWSVRTVGDLGLIGEEPARRLRGAVESTPEVA 148
Query: 129 GLNLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDSSL---IAKYLDTSDVPDPDL 184
++ +A Y R EI A++ + +++ +G+ VD+ I++ L TS PDPDL
Sbjct: 149 SFHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVDAVTVEGISENLYTSGQPDPDL 208
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+IRT GE+RLS FLLWQ AYSE F +WP F F AL Y+ R RR+G
Sbjct: 209 VIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDFLRALRDYSARHRRYG 261
>gi|222480474|ref|YP_002566711.1| undecaprenyl diphosphate synthase [Halorubrum lacusprofundi ATCC
49239]
gi|222453376|gb|ACM57641.1| undecaprenyl diphosphate synthase [Halorubrum lacusprofundi ATCC
49239]
Length = 340
Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 117/227 (51%), Gaps = 4/227 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ II DGN R+A RG GHR G ++ A++G+ LT++AFS N+ R
Sbjct: 25 PTHVAIIQDGNRRYARERGDNAPDGHRAGAATTERVLDWCADLGVAELTLYAFSTENFER 84
Query: 71 PVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
P E+ L L+++ L+ + + ++VR IG+ L + + + AE +T N
Sbjct: 85 PDEELEPLFDLLETKLRDFADADRVHEQGVRVRAIGDVDRLPERVRDAVDYAERRTADND 144
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
L +A Y R E+ A I +D+++G + DVD + + L V D DLI+RT
Sbjct: 145 RFTLNVALAYGGRTELLDAATAIARDVDAGDLDPTDVDVETVEERLYDRPVRDVDLIVRT 204
Query: 189 GGEKRLSDFLLWQVAYSEFV--FIPEYWPDFSRELFFHALNQYNLRD 233
GG++R S+FL W +E F YWP+FS F A+ Y R+
Sbjct: 205 GGDERTSNFLPWHANGNEAAVYFCAPYWPEFSEVEFLRAIRTYQSRE 251
>gi|31792277|ref|NP_854770.1| short (C15) chain Z-isoprenyl diphosphate synthase (Z-FPP synthase)
(Z-farnesyl diphosphate synthase) (Z-FPP synthetase)
(Z-farnesyl diphosphate synthetase)
(geranyltranstransferase) (farnesyl pyrophosphate
synthetase) [Mycobacterium bovis AF2122/97]
gi|121637015|ref|YP_977238.1| Short (C15) chain Z-isoprenyl diphosphate synthase [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|215426375|ref|ZP_03424294.1| Short (C15) chain Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T92]
gi|215429952|ref|ZP_03427871.1| Short (C15) chain Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis EAS054]
gi|215445243|ref|ZP_03431995.1| Short (C15) chain Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T85]
gi|219556964|ref|ZP_03536040.1| Short (C15) chain Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T17]
gi|224989488|ref|YP_002644175.1| short (C15) chain Z-isoprenyl diphosphate synthase [Mycobacterium
bovis BCG str. Tokyo 172]
gi|260186006|ref|ZP_05763480.1| short (C15) chain Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis CPHL_A]
gi|260204314|ref|ZP_05771805.1| short (C15) chain Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis K85]
gi|289446672|ref|ZP_06436416.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis CPHL_A]
gi|289569074|ref|ZP_06449301.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T17]
gi|289573729|ref|ZP_06453956.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis K85]
gi|289749619|ref|ZP_06508997.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T92]
gi|289753149|ref|ZP_06512527.1| short-chain Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis EAS054]
gi|289757171|ref|ZP_06516549.1| short chain z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T85]
gi|294993269|ref|ZP_06798960.1| short (C15) chain Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis 210]
gi|44888396|sp|Q7U0P8|ZFPP_MYCBO RecName: Full=Short-chain Z-isoprenyl diphosphate synthase;
AltName: Full=(2Z,6E)-farnesyl diphosphate synthase;
AltName: Full=Z-FPP synthase; AltName: Full=Z-isoprenyl
diphosphate synthase
gi|31617865|emb|CAD93975.1| SHORT (C15) CHAIN Z-ISOPRENYL DIPHOSPHATE SYNTHASE (Z-FPP SYNTHASE)
(Z-FARNESYL DIPHOSPHATE SYNTHASE) (Z-FPP SYNTHETASE)
(Z-FARNESYL DIPHOSPHATE SYNTHETASE)
(GERANYLTRANSTRANSFERASE) (FARNESYL PYROPHOSPHATE
SYNTHETASE) [Mycobacterium bovis AF2122/97]
gi|121492662|emb|CAL71131.1| Short (C15) chain Z-Isoprenyl diphosphate synthase [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|224772601|dbj|BAH25407.1| short (C15) chain Z-isoprenyl diphosphate synthase [Mycobacterium
bovis BCG str. Tokyo 172]
gi|289419630|gb|EFD16831.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis CPHL_A]
gi|289538160|gb|EFD42738.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis K85]
gi|289542828|gb|EFD46476.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T17]
gi|289690206|gb|EFD57635.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T92]
gi|289693736|gb|EFD61165.1| short-chain Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis EAS054]
gi|289712735|gb|EFD76747.1| short chain z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T85]
gi|326904689|gb|EGE51622.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis W-148]
Length = 262
Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 124/232 (53%), Gaps = 7/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI ++ DGN RWA + G + G+R G E++ E GI+ T++ S N +
Sbjct: 32 PRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWCHEAGIELATVYLLSTENLQ 91
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E++ L+++I +++ N+ VR +G+ + ++ L+ A + T
Sbjct: 92 RDPDELAALIEIITDVVEE--ICAPANHWSVRTVGDLGLIGEEPARRLRGAVESTPEVAS 149
Query: 130 LNLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDSSL---IAKYLDTSDVPDPDLI 185
++ +A Y R EI A++ + +++ +G+ VD+ I++ L TS PDPDL+
Sbjct: 150 FHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVDAVTVEGISENLYTSGQPDPDLV 209
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRT GE+RLS FLLWQ AYSE F +WP F F AL Y+ R RR+G
Sbjct: 210 IRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDFLRALRDYSARHRRYG 261
>gi|195048163|ref|XP_001992481.1| GH24772 [Drosophila grimshawi]
gi|193893322|gb|EDV92188.1| GH24772 [Drosophila grimshawi]
Length = 308
Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 125/234 (53%), Gaps = 11/234 (4%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +MDGN R+A ++ + + GH G +++ ++GI+ +T FAFSI N++R
Sbjct: 27 PHHIAFVMDGNRRFARSKHIDKIEGHSLGFAKLADVLRWCLDMGIREVTTFAFSIENFKR 86
Query: 71 PVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
E+ L L + S L L ++ I++RVIGN L D+ ++ A +T N
Sbjct: 87 SSEEVEGLFNLAREKFSTLLAETSRLDEHGIQIRVIGNIELLPKDLQRLVATAMLRTERN 146
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIE-------SGSVCSHDVDSSLIAKYLDTSDVP 180
L L +AF Y+SRDEI++A++ + ++ ++ D++ L+ L T P
Sbjct: 147 DKLFLNVAFAYTSRDEITQAVEAVLKNNNDDDDDEGQDALQPTDINERLLEACLYTRHSP 206
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
PDL+ RT GE RLSDF++WQ++ S F WP + F ++ Y RDR
Sbjct: 207 PPDLVFRTSGETRLSDFMMWQLSTSVLYFTDVLWPQITIWNFLASIVAYQ-RDR 259
>gi|11498818|ref|NP_070047.1| hypothetical protein AF1219 [Archaeoglobus fulgidus DSM 4304]
gi|6136142|sp|O29049|UPPS_ARCFU RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|2649365|gb|AAB90027.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
Length = 251
Score = 131 bits (330), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 130/235 (55%), Gaps = 3/235 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ S+ + P HI IIMDGN R+A +GL GH G + E++ ++G+K LT+
Sbjct: 11 LLRSVRKGAIPHHIAIIMDGNRRFARKKGLEPHEGHFFGSKKAEEVLEWCWDLGVKMLTL 70
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLK--KNNIKVRVIGNRLSLDDDILCVLK 118
+AFS N+RR E + +L++S L++ + + ++V+V+G R L +++ +K
Sbjct: 71 YAFSTENFRRSEKEKKNIFQLLESELRRLLKDRRTYERELRVKVVGKRELLPENLRETIK 130
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYL-DTS 177
E E++T+ + L +A Y R EI A++ I + + G V ++D ++ ++L
Sbjct: 131 EVEERTKKHRRHYLNVAVAYGGRQEIIDAVRAILRKVRKGEVRPEEIDEKMLEEHLYGEG 190
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLR 232
DLIIRTGGE+RLS+FL WQ A S F YWP+F + A+ + R
Sbjct: 191 RYSKVDLIIRTGGEQRLSNFLPWQAANSVAYFCDVYWPEFRKIDLLRAIRAWQYR 245
>gi|118381126|ref|XP_001023724.1| undecaprenyl diphosphate synthase family protein [Tetrahymena
thermophila]
gi|89305491|gb|EAS03479.1| undecaprenyl diphosphate synthase family protein [Tetrahymena
thermophila SB210]
Length = 292
Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 122/226 (53%), Gaps = 7/226 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IMDGN R+A +G + GH G F + +G+K +T+FAF+I N+ R
Sbjct: 55 PNHVAFIMDGNRRYATNQGKQKTEGHFSGFVTFKKCCEWCFHLGVKEMTVFAFAIENFNR 114
Query: 71 PVSEISELVKLIKSFLKK----GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
E+ L+ L + L+K G + L++ NIKV+V G+ L ++ + E E+ T+
Sbjct: 115 SKEEVEVLMNLAQKSLRKLANDGEF-LQRYNIKVKVCGDLKLLPQEVQQSMLEMEELTKN 173
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N L L I F Y+S++EI I + +E + + +D+ +I + + PD++I
Sbjct: 174 NKTLLLNICFAYNSQNEIENCFSQIKKQVEDKKLDINKIDNKVIMENMHIKTC--PDILI 231
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLR 232
RT E RLS+FL +Q ++ +FI E WP+ S + QY L+
Sbjct: 232 RTSNENRLSNFLTYQSTNTQIIFIKENWPELSIFSILKIIIQYQLQ 277
>gi|224173175|ref|XP_002339738.1| predicted protein [Populus trichocarpa]
gi|222832143|gb|EEE70620.1| predicted protein [Populus trichocarpa]
Length = 211
Score = 131 bits (329), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 112/205 (54%), Gaps = 2/205 (0%)
Query: 35 GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLK 94
GH +G + E++ A EVGI+ +T++ FS N++R E++ L LI L+ +
Sbjct: 6 GHVRGKDKLEEVLDWAMEVGIRIVTVYGFSSENFKRDPEEVNFLFDLINDSLRGLLKDDR 65
Query: 95 --KNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIF 152
KN I+VR+IG+ L + ++ + + E T IA Y R EI A+KNI
Sbjct: 66 IFKNQIRVRIIGDFKGLPEYLVNTIHDVEKITAGFKKFKFNIAIGYGGRQEIIDAVKNIA 125
Query: 153 QDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPE 212
D+ S + D++ L YL + + DPDLI+RT GE+R+S+FLLWQ AYSE F
Sbjct: 126 ADVVSKKLKIEDINEKLFRNYLYDNTLTDPDLILRTSGEERISNFLLWQSAYSELYFSDV 185
Query: 213 YWPDFSRELFFHALNQYNLRDRRFG 237
WPD + F A+ Y R RR+G
Sbjct: 186 NWPDLKKLDFLRAIYSYQSRKRRYG 210
>gi|215402910|ref|ZP_03415091.1| Short (C15) chain Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis 02_1987]
gi|289744826|ref|ZP_06504204.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis 02_1987]
gi|289685354|gb|EFD52842.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis 02_1987]
Length = 262
Score = 131 bits (329), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 123/232 (53%), Gaps = 7/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI ++ DGN RWA + G + G+R G E++ E GI T++ S N +
Sbjct: 32 PRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWCHEAGIDLATVYLLSTENLQ 91
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E++ L+++I +++ N+ VR +G+ + ++ L+ A + T
Sbjct: 92 RDPDELAALIEIITDVVEE--ICAPANHWSVRTVGDLGLIGEEPARRLRGAVESTPEVAS 149
Query: 130 LNLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDSSL---IAKYLDTSDVPDPDLI 185
++ +A Y R EI A++ + +++ +G+ VD+ I++ L TS PDPDL+
Sbjct: 150 FHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVDAVTVEGISENLYTSGQPDPDLV 209
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRT GE+RLS FLLWQ AYSE F +WP F F AL Y+ R RR+G
Sbjct: 210 IRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDFLRALRDYSARHRRYG 261
>gi|241950137|ref|XP_002417791.1| dehydrodolichyl diphosphate synthetase, putative [Candida
dubliniensis CD36]
gi|223641129|emb|CAX45505.1| dehydrodolichyl diphosphate synthetase, putative [Candida
dubliniensis CD36]
Length = 314
Score = 131 bits (329), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 127/227 (55%), Gaps = 11/227 (4%)
Query: 1 MVASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
V S++ + P P HI +IMDGN +A LP GH G +++ +VGI+ +T
Sbjct: 35 FVISIIKTGPIPKHIAMIMDGNRTYAKKHRLPLKEGHFAGANALVKVLEVCYKVGIEQVT 94
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLK-----KGFYSLKKNNIKVRVIGNRLSLDDDIL 114
I+AFS+ N+ R E+ L L++ LK + Y+ + N +++R+IGNR + +DIL
Sbjct: 95 IYAFSLENFNRSKEEVDTLFALLRDKLKVMSEHEDSYA-RYNKVRIRIIGNRSFIPEDIL 153
Query: 115 CVLKEAEDQTR-LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD-VDSSLIAK 172
L+ E+ T+ + L + F Y++RDEI+ A+K+I SG + + + + + I K
Sbjct: 154 KDLENVEETTKDFGSKKTLNVCFPYTARDEITYAVKSIASKRVSGELNNRNKITTKTIEK 213
Query: 173 -YLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPE-YWPDF 217
+ DVP D++IRT G RLSDFLLWQ + P+ WPDF
Sbjct: 214 NFYFGDDVPPLDILIRTSGHTRLSDFLLWQCTTECTIEFPDVLWPDF 260
>gi|312070081|ref|XP_003137981.1| hypothetical protein LOAG_02395 [Loa loa]
gi|307766849|gb|EFO26083.1| hypothetical protein LOAG_02395 [Loa loa]
Length = 303
Score = 131 bits (329), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 128/237 (54%), Gaps = 15/237 (6%)
Query: 11 PDHIGIIMDGNGRWA-AARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P+HI IMDGN R++ R GHRKG + +++ E G+K +T++A S+ N++
Sbjct: 26 PEHIAFIMDGNRRYSRLQRYSSFVEGHRKGFDKLTKVMQWCREFGVKEVTVYALSLENFK 85
Query: 70 RPVSEISELVKLIKSFLKK------GFY---SLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
R +EI +L+ L + L + Y L +N+I+++ G+ L + + +
Sbjct: 86 RSATEIDDLMTLFEHKLTQLLDESLRLYFRDKLIENDIRIQFFGDLKHLPPKLRQYIAKI 145
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E TR + + + Y+++DE+ RA I ++ G + + D++ LI++ LD+
Sbjct: 146 ELLTREHNSGRVNVCIAYTAQDELRRAFVTIAHGVQKGLLATTDINEYLISRCLDSRFSN 205
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDF-----SRELFFHALNQYNLR 232
DPDL+IRT GE RLSDFLLWQ + F WP+F + ++F+ NQ +L+
Sbjct: 206 DPDLLIRTSGETRLSDFLLWQCSKCYIYFDKVLWPNFDYWNLCKAIYFYQQNQMSLK 262
>gi|257053890|ref|YP_003131723.1| undecaprenyl diphosphate synthase [Halorhabdus utahensis DSM 12940]
gi|256692653|gb|ACV12990.1| undecaprenyl diphosphate synthase [Halorhabdus utahensis DSM 12940]
Length = 309
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 116/227 (51%), Gaps = 4/227 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +I DGN R+A G AGHR+G E ++ E+GI+ LT++AFS N+ R
Sbjct: 25 PTHIAVIQDGNRRYARKEGQETSAGHREGAETTEALLEWCDELGIEELTLYAFSTENFDR 84
Query: 71 PVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
P + + L LI+ L S + + +++R IG L + + + AE QTR
Sbjct: 85 PADQRAVLFDLIEDKLYDFADSDRVHEAGVRIRAIGETHRLPERVREAIDYAEAQTRGYD 144
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+L IA Y R E+ A+K++ D++ G + +D + L D DLIIRT
Sbjct: 145 QFHLNIALAYGGRAELLGAVKDLAADVDRGDLDPATIDVETVENRLYEGPTRDVDLIIRT 204
Query: 189 GGEKRLSDFLLWQVAYSEFV--FIPEYWPDFSRELFFHALNQYNLRD 233
GG++R S+FL W +E F YWP+F + F A+ Y R+
Sbjct: 205 GGDERTSNFLPWHANGNEAAAYFCAPYWPEFRKIDFLRAIRTYEHRE 251
>gi|198428531|ref|XP_002120306.1| PREDICTED: similar to dehydrodolichyl diphosphate synthase [Ciona
intestinalis]
Length = 306
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 129/234 (55%), Gaps = 7/234 (2%)
Query: 1 MVASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ +S++ P P H+ IMDGN R+A + + R GH +G + E++ E+G++ +T
Sbjct: 15 LYSSILKVGPIPKHLAFIMDGNRRYAVKKHVERIEGHSQGFDKLAEVLQWCQELGVEEVT 74
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCV 116
++AFS N++R E+ L++L ++ ++ L++ +++ V+G L D + +
Sbjct: 75 VYAFSAENFKRSKEEVDSLMELARTKFERILKEKDKLEELGVRLCVVGELDMLPDSLQTL 134
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT 176
K+ T+ N L + Y+SR E+++A+++I ++ G + D+ L+ K T
Sbjct: 135 AKQLITTTKNNYKCKLNVCAAYTSRLEMTQAVRDIKWGVDEGLIYVSDISERLMDK---T 191
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
+P DL+IRT GE RLSDFLLWQ + S F+ WP+ + F+ A+ Y
Sbjct: 192 LQIPKVDLLIRTSGEVRLSDFLLWQSSLSYLSFLRHLWPEMTIWDFYGAILLYQ 245
>gi|328856647|gb|EGG05767.1| hypothetical protein MELLADRAFT_87649 [Melampsora larici-populina
98AG31]
Length = 271
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 124/234 (52%), Gaps = 18/234 (7%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+G IMDGN R++ G+P GH G E ++ + + N+T+
Sbjct: 14 VIQTLKQGPTPRHVGFIMDGNRRFSRTNGVPVEEGHMAGFEALKRVLELLLRLEVPNVTV 73
Query: 61 FAFSINNWRRPVSEISELVKLIKSFL----KKGFYSLKKNNIKVRVIGNRLSLDDDILCV 116
+AF+I+N+ RP E+S+L+ + ++ L ++G L + I+V VIG + L DI
Sbjct: 74 YAFAIDNFNRPAHEVSKLMDMARTKLIEICERG-QLLDRYGIRVVVIGRKDLLPADIQNS 132
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT 176
+ + E T NT L +AF YSS++E++ A+ QD S + + +D I K++ T
Sbjct: 133 VAKVESMTAHNTRGCLNVAFPYSSQEEMATALCRTVQDSISQNQPTSMIDIETIGKHIYT 192
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFV-------------FIPEYWPDF 217
S P D+++RT G +RLSDFLLWQ F+ YWPDF
Sbjct: 193 SHSPPLDILVRTSGVRRLSDFLLWQTTLDTMKTSSKIEALGPSVHFVDRYWPDF 246
>gi|260948780|ref|XP_002618687.1| hypothetical protein CLUG_02146 [Clavispora lusitaniae ATCC 42720]
gi|238848559|gb|EEQ38023.1| hypothetical protein CLUG_02146 [Clavispora lusitaniae ATCC 42720]
Length = 298
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 122/219 (55%), Gaps = 7/219 (3%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P H+G+IMDGN R+A L GH G + ++ + G+++ T++AFS
Sbjct: 25 LQTGPTPRHVGVIMDGNRRFAREHKLEVKEGHSFGFDAMAAVLELLYQSGVEHATVYAFS 84
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I+N+RR E+ L+ L KS LK+ + I++RV+GN L D+ L++ E
Sbjct: 85 IDNFRRSRQEVDWLMDLAKSKLKQMAQHGELCDQYGIRIRVLGNVSLLPPDVRAALRDTE 144
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T N+ L + F Y++RDE++ A++ + + C VD + + ++L T + P
Sbjct: 145 RRTAHNSRAVLNVCFPYTARDEMAHAVRAVVGAAAADPHCK--VDQAALERHLYTGEAPP 202
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSE--FVFIPEYWPDFS 218
DL++RT G RLSDFLLWQ S VF P+ WP+F+
Sbjct: 203 LDLLVRTSGTFRLSDFLLWQAVPSSCAVVFCPKLWPEFT 241
>gi|320169531|gb|EFW46430.1| dehydrodolichyl diphosphate synthase [Capsaspora owczarzaki ATCC
30864]
Length = 467
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 118/223 (52%), Gaps = 5/223 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IMDGN R+A + GH G + + + E+G++ +T++AFSI N++R
Sbjct: 164 PRHVAFIMDGNRRFAKKIHVNTAMGHALGFDKLEQTLDWCLELGVRIVTVYAFSIENFKR 223
Query: 71 PVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
E++ L+ L K + L + ++K+ + +RV+G+ L D+ + A +R N
Sbjct: 224 SSQEVTALMDLAKVKFARLIEESEVIQKHGVSIRVLGDVTMLPLDVQQAIARAVTLSRNN 283
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+ L I F Y+SR E+ A K I + G + D+ L + + T+D PDL +R
Sbjct: 284 SKSILNICFPYTSRHEMVEATKQIATGLSEGRLQESDITEDLFERCMYTADA--PDLFVR 341
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
T GE RLSDF+LWQ A+S F WP+FS F A+ Y
Sbjct: 342 TSGEVRLSDFMLWQSAFSHMYFAEVLWPEFSLWDLFVAVLHYQ 384
>gi|15790698|ref|NP_280522.1| hypothetical protein VNG1779C [Halobacterium sp. NRC-1]
gi|169236439|ref|YP_001689639.1| di-trans,poly-cis-decaprenylcistransferase / (Z)-prenyl diphosphate
synthase [Halobacterium salinarum R1]
gi|42559881|sp|Q9HP68|UPPS_HALSA RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|10581234|gb|AAG20002.1| conserved hypothetical protein [Halobacterium sp. NRC-1]
gi|167727505|emb|CAP14293.1| di-trans,poly-cis-decaprenylcistransferase / (Z)-prenyl diphosphate
synthase [Halobacterium salinarum R1]
Length = 302
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 116/226 (51%), Gaps = 4/226 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +I DGN R+A G G++ G ++ +++G++ LT++AFS N+ R
Sbjct: 25 PAHVAVIQDGNRRYAREHGDDPTDGYQSGARTTERVLEWCSDLGVEELTLYAFSTENFER 84
Query: 71 PVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
P + L L++S L++ + + +++R IG+ L + + AE +T
Sbjct: 85 PPDQQQHLFDLLESKLREFADADRVHADRVRIRAIGDTGRLPQRVRDAITYAESRTAGYD 144
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
G L +A Y RDE+ A + + + +G + D+D+ I L TS V D DLIIRT
Sbjct: 145 GFTLNVALAYGGRDELLTAARGVADAVAAGDLDPADIDAQAIESRLHTSPVRDVDLIIRT 204
Query: 189 GGEKRLSDFLLWQVAYSEFV--FIPEYWPDFSRELFFHALNQYNLR 232
GG++R S+FL W SE F YWP+FS+ A+ Y R
Sbjct: 205 GGDERTSNFLPWHANGSEAAVFFCTPYWPEFSKVDLLRAIRTYESR 250
>gi|190344687|gb|EDK36415.2| hypothetical protein PGUG_00513 [Meyerozyma guilliermondii ATCC
6260]
Length = 317
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 120/213 (56%), Gaps = 10/213 (4%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGN R+A + + GH G E ++ E G++ T++AFSI N++R
Sbjct: 32 PKHVAIIMDGNRRYARSHKMEIREGHNIGFETMASVLELLFEAGVECATVYAFSIENFKR 91
Query: 71 PVSEISELVKLIKSFL---KKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
E+ L+ + +S L ++ +K +++RV+GNR L D+ +++E ED T+ N
Sbjct: 92 SAYEVEALMDMARSRLCQIRQHGELCEKYGVRLRVVGNRKLLPVDVQQIVQETEDMTKNN 151
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T L++ F Y++RD+++++I+N+ ES ++ S +L T P DL+IR
Sbjct: 152 TRAVLYMCFPYTARDDMTQSIRNVVA--ESLINPEFEISESAFNHFLYT---PPLDLLIR 206
Query: 188 TGGEKRLSDFLLWQVAYSE--FVFIPEYWPDFS 218
T G RLSDFLLWQ + VF WP+FS
Sbjct: 207 TSGTYRLSDFLLWQSVSPKCSVVFSDRLWPEFS 239
>gi|225719016|gb|ACO15354.1| Dehydrodolichyl diphosphate synthase [Caligus clemensi]
Length = 282
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 123/229 (53%), Gaps = 5/229 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + S P H+ IMDGN R+A + GH G + +E + ++G++ +T++AFS
Sbjct: 40 LRTGSLPRHVAFIMDGNRRFARKSQVDLIKGHSSGFDKLSETLFWCRDLGVEEVTVYAFS 99
Query: 65 INNWRRPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++RP EI +L++L ++ ++ + L++ ++V+V+G L D+ + +
Sbjct: 100 IENFKRPQKEIDDLMELAQNKFERMLSEIHRLREKGVRVQVLGKLSLLPQDLQNTIHQCV 159
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ T+ + L +AF Y+SR+E++ AI D S S D+D + +Y
Sbjct: 160 EATKDHKECTLNVAFAYTSREELTSAISLAASD--SSSNVQEDLDVKSLERYFYGEGSRK 217
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
DL+IRT GE RLSDF+LWQ +Y+ F WP+F F A+ Y
Sbjct: 218 VDLLIRTSGEVRLSDFMLWQGSYAVTYFTKVLWPEFKVTHFMGAIFHYQ 266
>gi|66802670|ref|XP_635207.1| hypothetical protein DDB_G0291436 [Dictyostelium discoideum AX4]
gi|60463517|gb|EAL61702.1| hypothetical protein DDB_G0291436 [Dictyostelium discoideum AX4]
Length = 420
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 126/229 (55%), Gaps = 10/229 (4%)
Query: 1 MVASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ +S + + P P HIG+IMDGN R+A L GH+KG ++ +G+K ++
Sbjct: 113 IASSTLKNGPIPKHIGVIMDGNRRFAERNHLETKEGHKKGFNTMLDLCQWGLTLGVKIIS 172
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCV 116
++AFSI N++R SE+ +L++L + + + L++ +++RV+G+ + + +
Sbjct: 173 VYAFSIENFKRSKSEVQDLMELANNKFTEMISKSHKLQQLGVRIRVVGDHSHIPEKTKSI 232
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI-ESGSVCSHDVDSSLIAKYLD 175
L +A T NT L I +Y+S +EI ++K + + + + + D+D L L
Sbjct: 233 LAKAVKSTENNTKALLNICLSYTSHEEILHSMKILSKGVNQEKKIEIEDIDQDLFENCLY 292
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFH 224
+ D D++IRT GE RLSDF+LWQ ++ + WPDFS FFH
Sbjct: 293 IKE--DLDILIRTSGEYRLSDFMLWQSCFTNLALVNTLWPDFS---FFH 336
>gi|311743134|ref|ZP_07716942.1| di-trans,poly-cis-decaprenylcistransferase [Aeromicrobium marinum
DSM 15272]
gi|311313814|gb|EFQ83723.1| di-trans,poly-cis-decaprenylcistransferase [Aeromicrobium marinum
DSM 15272]
Length = 253
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 118/231 (51%), Gaps = 7/231 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+G I+DGN RWA L G+R G +E + ++G++ +T + S +N +R
Sbjct: 25 PHHVGAIVDGNRRWAKGADLDLERGYRAGAAKVDEFLGWCDDLGVQIVTFWVLSTDNLQR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ ++ ++ + + +V ++G+ L + L+ A D T + GL
Sbjct: 85 SPEEVRSILGAVEDLVDR---LSADGRWRVAIMGSLDLLPPESATRLQRAADSTAGHEGL 141
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDVPDPDLII 186
+ + Y R E++ AI+++ + + +V +L IA++L T PDPDL+I
Sbjct: 142 RVNVCVGYGGRQELTDAIRSLLLEQAAKGRDLTEVAETLVVDDIAEHLYTKGQPDPDLVI 201
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE+RLS FLLWQ +SEF F WP F R A+ Y R RRFG
Sbjct: 202 RTSGEQRLSGFLLWQSVHSEFYFCDALWPAFRRVDLLRAMRSYAARQRRFG 252
>gi|50309435|ref|XP_454725.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643860|emb|CAG99812.1| KLLA0E17205p [Kluyveromyces lactis]
Length = 275
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 117/217 (53%), Gaps = 5/217 (2%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S P H+ IMDGN R+A + GH G E I+ E G+K T+FAFSI
Sbjct: 28 SDKVPQHVAFIMDGNRRFAKKNNMEVNEGHNAGFESMCRILELCYESGMKVATVFAFSIE 87
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
N++R E++ L++L K +K+ ++ IKV++IG+R L D+L ++ AE+
Sbjct: 88 NFKRSTFEVNWLMELAKDKIKQISQHGELAEQYGIKVQIIGDRSLLPADVLKEVELAEEI 147
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T N+ L I F Y+ R+EI +I+ I ++ G + D+D I +L T P +
Sbjct: 148 TMNNSRAVLNICFPYTGREEIVHSIQGIMKETAMGEIDYRDIDEQTIEDHLYTQGQPPVE 207
Query: 184 LIIRTGGEKRLSDFLLWQVAY--SEFVFIPEYWPDFS 218
L+IRT G RLSDFLLWQ++ + WP+F+
Sbjct: 208 LLIRTSGVTRLSDFLLWQLSNRGCTIELVDCLWPEFT 244
>gi|126179731|ref|YP_001047696.1| undecaprenyl diphosphate synthase [Methanoculleus marisnigri JR1]
gi|125862525|gb|ABN57714.1| Undecaprenyl pyrophosphate synthetase [Methanoculleus marisnigri
JR1]
Length = 259
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 123/229 (53%), Gaps = 5/229 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +I DGN R+A +GL GHR G + +++ A E+G++++T++ FS N+RR
Sbjct: 22 PRHVAVIQDGNRRFAREQGLDTAIGHRLGADATEQVLDWACELGVQHITLYTFSTENFRR 81
Query: 71 PVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+E+ L L + + +N I+V++IG+R L D++L + AE+ TR +
Sbjct: 82 DSAELESLFLLFREKFAAILRDKRVHRNRIRVQMIGDRSLLPDELLTTIDAAEEATRDYS 141
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT-SDVPDPDLIIR 187
+ IA Y R+EI A ++I ++ G++ +D + + +L+ + +P DLIIR
Sbjct: 142 DYFINIALAYGGRNEIVHAARSILDEVRQGAIDPAAIDPATVEAHLNRGAPIPPVDLIIR 201
Query: 188 TGGEKRLSDFLLWQV--AYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
TG + R S+FL W S F +WP F + A+ Y+ R R
Sbjct: 202 TGNDYRTSNFLPWLANGHESAVYFCAPFWPAFRKIDLLRAMRVYDQRMR 250
>gi|170584842|ref|XP_001897201.1| Undecaprenyl diphosphate synthase family protein [Brugia malayi]
gi|158595391|gb|EDP33948.1| Undecaprenyl diphosphate synthase family protein [Brugia malayi]
Length = 322
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 129/254 (50%), Gaps = 32/254 (12%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P+HI IMDGN R+A + A GHRKG + +++ E G+K +T++A S+ N++
Sbjct: 28 PEHIAFIMDGNRRYARRQRYSSFAEGHRKGFDKLTKVMQWCREFGVKEVTVYALSLENFK 87
Query: 70 RPVSEISELVKLIKSFLK--------------KGFY------------SLKKNNIKVRVI 103
R +E+ +L+ L + L K F+ L +N I+++
Sbjct: 88 RSRTEVDDLMTLFEHKLLQLLDESLVLPHIKLKTFFVSSMCIICANQDKLTENGIRIQFF 147
Query: 104 GNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSH 163
GN L + + + E TR + + + Y+S+DE+ RA I I+ G + +
Sbjct: 148 GNLKHLPRKLQQYMAKIELLTREHNSGTVNVCIAYTSQDELRRAFVTIAHGIQKGLLTTT 207
Query: 164 DVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDF-----S 218
D++ LI++ LD+ DPDL+IRT GE RLSDFLLWQ + + F WP+F
Sbjct: 208 DINECLISRCLDSRFSRDPDLLIRTSGETRLSDFLLWQCSKCQIYFDGVLWPNFDYWNLC 267
Query: 219 RELFFHALNQYNLR 232
+ ++F+ +Q L+
Sbjct: 268 KAIYFYQQSQIPLK 281
>gi|108801101|ref|YP_641298.1| undecaprenyl pyrophosphate synthetase [Mycobacterium sp. MCS]
gi|108771520|gb|ABG10242.1| Undecaprenyl pyrophosphate synthetase [Mycobacterium sp. MCS]
Length = 246
Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 116/225 (51%), Gaps = 8/225 (3%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S P HI ++ DGN RWA G + G+R G E++ GI+ T++ S
Sbjct: 12 SQLPRHIAVLCDGNRRWARDAGHDDVSYGYRVGAAKIAEMLRWCQAAGIEMATVYLLSTE 71
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
N +R E++EL+++I +++ N VR +G+ L D+ L++A + T
Sbjct: 72 NLQRDADELAELIEIITGVVEE--ICAPANRWSVRTVGDLSLLGDEPARRLRDAVESTTG 129
Query: 127 N-TGLNLFIAFNYSSRDEISRAIKNIFQ----DIESGSVCSHDVDSSLIAKYLDTSDVPD 181
N T ++ +A Y R EI A++ + D +G V + I++ L TS PD
Sbjct: 130 NGTAFHVNVAVAYGGRQEIVDAVRALLSKKLADGVTGEQLVEAVTAEAISENLYTSGQPD 189
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHAL 226
PDL+IRT GE+RLS FLLWQ AYSE F YWP F R F AL
Sbjct: 190 PDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAYWPAFRRVDFLRAL 234
>gi|313232664|emb|CBY19334.1| unnamed protein product [Oikopleura dioica]
Length = 281
Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 118/226 (52%), Gaps = 7/226 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IMDGN R+A G GH++G E+++ + I +T++AFS +N++R
Sbjct: 27 PHHVAFIMDGNRRFARRTGDAPIHGHKQGFSKLAEVLSWCEMLSIPEVTVYAFSADNFKR 86
Query: 71 PVSEISELVKLIKS-FLK--KGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
P +E+ L+ L + FL+ LK+ +++R+IG L D+ E E +TR N
Sbjct: 87 PQAEVDGLMTLAREKFLQLLSEQAKLKEKGVRIRMIGEIDLLPADVRQPAAELEQKTRNN 146
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L I Y+SR E A K + E+ + +D L++K + S P L+IR
Sbjct: 147 NSYTLNICIAYTSRLECVNAAKKLLHAFETSKGLA--IDEQLVSKSMYLSS--PPQLLIR 202
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
T GE RLSDFLL+Q ++ F+ +WPDFS F L +Y D
Sbjct: 203 TSGEARLSDFLLFQCQKAQICFVAPFWPDFSLYDFLGCLLKYQKAD 248
>gi|284034435|ref|YP_003384366.1| undecaprenyl diphosphate synthase [Kribbella flavida DSM 17836]
gi|283813728|gb|ADB35567.1| undecaprenyl diphosphate synthase [Kribbella flavida DSM 17836]
Length = 261
Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 123/242 (50%), Gaps = 16/242 (6%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPR-CAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
++ P H+G++MDGN RWA +G GHR G + G++++T+F
Sbjct: 24 QLVGKPRPQHVGLVMDGNRRWARGQGHANPSVGHRYGALHVENALGWCEAAGVRHVTVFV 83
Query: 63 FSINNWR-RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
S N R R E++ L+ LI+ + + S +V V G L LKEA
Sbjct: 84 CSTENLRKRGDVEVAYLMSLIEEVVAQRL-SEPDGRWQVHVAGLLDLLPASTAQALKEAV 142
Query: 122 DQT-RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL-------IAKY 173
+ T + TG ++ +A Y R E+ A++++ +ES + +D+D I K+
Sbjct: 143 EATEKCATGNHVTLAIGYGGRQEVVEAVRSL---LESEAAAGNDLDGVAETLEIEDITKH 199
Query: 174 LDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
L T+ PDPDLIIRT GE+R+S+FLLWQ A++E F YWP F F AL Y D
Sbjct: 200 LYTAGRPDPDLIIRTSGEQRMSNFLLWQSAHAELYFCDPYWPAFREIDFLRALRSYA--D 257
Query: 234 RR 235
RR
Sbjct: 258 RR 259
>gi|15608226|ref|NP_215602.1| short (C15) chain Z-isoprenyl diphosphate synthase (Z-FPP synthase)
(Z-farnesyl diphosphate synthase) (Z-FPP synthetase)
(Z-farnesyl diphosphate synthetase)
(geranyltranstransferase) (farnesyl pyrophosphate
synthetase) [Mycobacterium tuberculosis H37Rv]
gi|15840523|ref|NP_335560.1| undecaprenyl diphosphate synthase [Mycobacterium tuberculosis
CDC1551]
gi|148660871|ref|YP_001282394.1| undecaprenyl diphosphate synthase [Mycobacterium tuberculosis
H37Ra]
gi|148822295|ref|YP_001287049.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis F11]
gi|218752766|ref|ZP_03531562.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis GM 1503]
gi|253799878|ref|YP_003032879.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis KZN 1435]
gi|254550079|ref|ZP_05140526.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis '98-R604 INH-RIF-EM']
gi|289555131|ref|ZP_06444341.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis KZN 605]
gi|289761224|ref|ZP_06520602.1| short chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis GM 1503]
gi|297633621|ref|ZP_06951401.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis KZN 4207]
gi|297730606|ref|ZP_06959724.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis KZN R506]
gi|306775234|ref|ZP_07413571.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu001]
gi|306781850|ref|ZP_07420187.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu002]
gi|306783791|ref|ZP_07422113.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu003]
gi|306788150|ref|ZP_07426472.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu004]
gi|306792483|ref|ZP_07430785.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu005]
gi|306796879|ref|ZP_07435181.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu006]
gi|306802766|ref|ZP_07439434.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu008]
gi|306806948|ref|ZP_07443616.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu007]
gi|306967150|ref|ZP_07479811.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu009]
gi|306971338|ref|ZP_07483999.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu010]
gi|307079066|ref|ZP_07488236.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu011]
gi|307083629|ref|ZP_07492742.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu012]
gi|313657933|ref|ZP_07814813.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis KZN V2475]
gi|6136589|sp|O53434|ZFPP_MYCTU RecName: Full=Short-chain Z-isoprenyl diphosphate synthase;
AltName: Full=(2Z,6E)-farnesyl diphosphate synthase;
AltName: Full=Z-FPP synthase; Short=Z-FPPS; AltName:
Full=Z-isoprenyl diphosphate synthase
gi|2896723|emb|CAA17202.1| SHORT (C15) CHAIN Z-ISOPRENYL DIPHOSPHATE SYNTHASE (Z-FPP SYNTHASE)
(Z-FARNESYL DIPHOSPHATE SYNTHASE) (Z-FPP SYNTHETASE)
(Z-FARNESYL DIPHOSPHATE SYNTHETASE)
(GERANYLTRANSTRANSFERASE) (FARNESYL PYROPHOSPHATE
SYNTHETASE) [Mycobacterium tuberculosis H37Rv]
gi|13880699|gb|AAK45374.1| undecaprenyl diphosphate synthase [Mycobacterium tuberculosis
CDC1551]
gi|148505023|gb|ABQ72832.1| undecaprenyl diphosphate synthase [Mycobacterium tuberculosis
H37Ra]
gi|148720822|gb|ABR05447.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis F11]
gi|253321381|gb|ACT25984.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis KZN 1435]
gi|289439763|gb|EFD22256.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis KZN 605]
gi|289708730|gb|EFD72746.1| short chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis GM 1503]
gi|308216241|gb|EFO75640.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu001]
gi|308325418|gb|EFP14269.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu002]
gi|308331433|gb|EFP20284.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu003]
gi|308335242|gb|EFP24093.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu004]
gi|308339048|gb|EFP27899.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu005]
gi|308342726|gb|EFP31577.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu006]
gi|308346620|gb|EFP35471.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu007]
gi|308350526|gb|EFP39377.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu008]
gi|308355174|gb|EFP44025.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu009]
gi|308359130|gb|EFP47981.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu010]
gi|308363045|gb|EFP51896.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu011]
gi|308366698|gb|EFP55549.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu012]
gi|323720456|gb|EGB29543.1| short-chain Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis CDC1551A]
gi|328459623|gb|AEB05046.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis KZN 4207]
Length = 262
Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 123/232 (53%), Gaps = 7/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI ++ DGN RWA + G + G+R G E++ E GI+ T++ S N +
Sbjct: 32 PRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWCHEAGIELATVYLLSTENLQ 91
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E++ L+++I +++ N+ VR +G+ + ++ L+ A + T
Sbjct: 92 RDPDELAALIEIITDVVEE--ICAPANHWSVRTVGDLGLIGEEPARRLRGAVESTPEVAS 149
Query: 130 LNLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDSSL---IAKYLDTSDVPDPDLI 185
++ +A Y R EI A++ + +++ +G+ VD+ I++ L TS PDPDL+
Sbjct: 150 FHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVDAVTVEGISENLYTSGQPDPDLV 209
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRT GE+RLS FLLWQ AYSE F +WP F F AL Y+ R R +G
Sbjct: 210 IRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDFLRALRDYSARHRSYG 261
>gi|313125504|ref|YP_004035768.1| undecaprenyl pyrophosphate synthetase [Halogeometricum borinquense
DSM 11551]
gi|312291869|gb|ADQ66329.1| Undecaprenyl pyrophosphate synthetase [Halogeometricum borinquense
DSM 11551]
Length = 310
Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/228 (33%), Positives = 117/228 (51%), Gaps = 4/228 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ II DGN R+A RG GH++G + +++ E G++ LT++ FS N+ R
Sbjct: 25 PAHVAIIQDGNRRYARRRGDEAPDGHKEGAKTAEQVLHWCEEFGVEELTLYTFSTENFDR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRV--IGNRLSLDDDILCVLKEAEDQTRLNT 128
P E+ L LI+ L + + + + VR+ IG L + ++ AE +TR
Sbjct: 85 PQEELEPLFDLIEEKLYEFADAERVHEAGVRICTIGETDRLPPRVREAIEYAESRTRGYD 144
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
G L IA Y R E+ A++++ +D+ SG++ DV I L D DLIIRT
Sbjct: 145 GFCLNIALAYGGRAELLGAVRDVARDVTSGTLSPDDVTVEEIDSRLCQHPTRDVDLIIRT 204
Query: 189 GGEKRLSDFLLWQVAYSEFV--FIPEYWPDFSRELFFHALNQYNLRDR 234
GG +R S+FL W +E F YWP+FS+ F L Y R++
Sbjct: 205 GGAERTSNFLPWHANGNEAAVYFCAPYWPEFSKVDFLRGLRTYESREK 252
>gi|291533212|emb|CBL06325.1| undecaprenyl diphosphate synthase [Megamonas hypermegale ART12/1]
Length = 164
Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 99/164 (60%)
Query: 79 VKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNY 138
+ L SFL + + ++N+++ IG L ++ L AE++T+ TG+ +A NY
Sbjct: 1 MNLFSSFLAEQIDEMCEDNVRIHFIGRVDELPGNLPNELHAAEERTKKITGVRFNVAVNY 60
Query: 139 SSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFL 198
RDEI A+KNI +++SG + +D +I L T D+P DL+IRT G+ RLS+FL
Sbjct: 61 GGRDEIVTAVKNIASEVQSGDLSIDKIDDKVIDDNLYTKDLPPVDLMIRTSGDIRLSNFL 120
Query: 199 LWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
LWQ AY+EF F WPDFS E F A+ + RDRRFGGLS K
Sbjct: 121 LWQAAYAEFWFTKTNWPDFSSEEFLQAIVDFQKRDRRFGGLSSK 164
>gi|320580945|gb|EFW95167.1| cis-prenyltransferase [Pichia angusta DL-1]
Length = 264
Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 118/213 (55%), Gaps = 8/213 (3%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGN R+A GLP GHR G E +++ ++G+K++T++AFSI N+ RP +EI
Sbjct: 1 MDGNRRYAKNAGLPLKEGHRAGAESLAKVLNCCFKLGVKDVTVYAFSIENFNRPQNEIDT 60
Query: 78 LVKLIKS---FLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFI 134
+ L+KS ++ + ++ ++++GNR + D+L L++ E+ T + NLFI
Sbjct: 61 IFSLLKSRLAYIANEDTDFRDYDVAIKIVGNRSLVPTDVLADLEKIEESTVSHGSHNLFI 120
Query: 135 AFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAK-YLDTSDVPDPDLIIRTGGEKR 193
AF Y+SRD+I ++ I Q ++ + +D + + + + D+++RT G R
Sbjct: 121 AFPYTSRDDIVHSMSEIVQKVKRNELGVDSIDEHTVEENFYYRGEAEKVDILVRTSGHTR 180
Query: 194 LSDFLLWQVAYSEFV-FIPEYWPDFSRELFFHA 225
LSD++LWQ + F WP+F F+H
Sbjct: 181 LSDYMLWQCHQDSVIEFSNTLWPNFK---FYHT 210
>gi|195604846|gb|ACG24253.1| dehydrodolichyl diphosphate synthase 6 [Zea mays]
gi|195625304|gb|ACG34482.1| dehydrodolichyl diphosphate synthase 6 [Zea mays]
Length = 303
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 125/245 (51%), Gaps = 19/245 (7%)
Query: 4 SMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+++S P P HI IMDGN R+A R + AGHR G + E+G+K +T++A
Sbjct: 41 AILSYGPMPKHIAFIMDGNRRYAKFRSMQEGAGHRMGFSTLIASLMYCYEMGVKYITVYA 100
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKE 119
FSI+N++R SE+ L++L++ + + + + K N K+ GN L + + ++
Sbjct: 101 FSIDNFKRDPSEVESLMQLMEEKINELLENQSVINKINCKINFWGNLDLLYEPVRLAAEK 160
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNI-------FQDIESGSVCSHDVDSSL--- 169
T NTGL I Y+S EI A+ + FQ G H ++ +
Sbjct: 161 LMASTAGNTGLVFSICMPYNSTSEIVNAVSQVCAERMEMFQSEHIGECNGHAANNGVRSE 220
Query: 170 -----IAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFH 224
+ +++ +++ PDPD++IRT GE RLS+FLLWQ +S WP+FS
Sbjct: 221 ISVADLDRHMYSAECPDPDIVIRTSGETRLSNFLLWQTTFSHLQNPDPLWPEFSFRHLVW 280
Query: 225 ALNQY 229
A+ QY
Sbjct: 281 AILQY 285
>gi|298674769|ref|YP_003726519.1| undecaprenyl diphosphate synthase [Methanohalobium evestigatum
Z-7303]
gi|298287757|gb|ADI73723.1| undecaprenyl diphosphate synthase [Methanohalobium evestigatum
Z-7303]
Length = 282
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 125/238 (52%), Gaps = 25/238 (10%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGN R+A G GHRKG ++ +++ + E+G+K LTI+AFS N+ R
Sbjct: 23 PEHIAIIMDGNRRFAQHIGKHSYYGHRKGSDITEKVIEWSCEIGVKELTIYAFSTENFNR 82
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNI-----------KVRVIGNRLSLDDDILCVLKE 119
P E +L +LI SLK N I K+R IG+ L + +++
Sbjct: 83 PKHETEKLFELI---------SLKFNEITDDERTHERRMKIRAIGDIERLPIHLQESIEK 133
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS-- 177
AE T L +A Y R +I +A++ + + I +G + D++ S I++YL +
Sbjct: 134 AETATCNYENFKLNVALTYGGRQDIVQAVQEMARKISNGYLELDDINESTISEYLYPACG 193
Query: 178 -DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFV--FIPEYWPDFSRELFFHALNQYNLR 232
V + DLIIRTGG +R+S+FL WQ +E F +WP F + F ++ Y R
Sbjct: 194 PSVSNVDLIIRTGGNERISNFLPWQTNGNECATYFCAPFWPSFRKIDFLRSIRLYQSR 251
>gi|296207143|ref|XP_002750514.1| PREDICTED: dehydrodolichyl diphosphate synthase isoform 3
[Callithrix jacchus]
Length = 294
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 117/231 (50%), Gaps = 37/231 (16%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A+++ + P P HI IMDGN R+A + R GH +G E + +GI +T+
Sbjct: 16 CANIIKAGPVPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFSI N++R SE+ L+ L + + F L
Sbjct: 76 YAFSIENFKRSKSEVDGLMDLAR----QKFSRL--------------------------M 105
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E+Q LN + F Y+SR EIS A++ + +E G + D+ SL+ K L T+ P
Sbjct: 106 EEQCFLN------VCFAYTSRHEISNAVREMAWGVEQGLLDPSDISESLLDKCLYTNRSP 159
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
PD++IRT GE RLSDFLLWQ ++S VF P WP+++ F A+ Q+ +
Sbjct: 160 HPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQM 210
>gi|119870242|ref|YP_940194.1| undecaprenyl pyrophosphate synthetase [Mycobacterium sp. KMS]
gi|119696331|gb|ABL93404.1| Undecaprenyl pyrophosphate synthetase [Mycobacterium sp. KMS]
Length = 263
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 116/225 (51%), Gaps = 8/225 (3%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S P HI ++ DGN RWA G + G+R G E++ GI+ T++ S
Sbjct: 29 SQLPRHIAVLCDGNRRWARDAGHDDVSYGYRVGAAKIAEMLRWCQAAGIEMATVYLLSTE 88
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
N +R E++EL+++I +++ N VR +G+ L D+ L++A + T
Sbjct: 89 NLQRDADELAELIEIITGVVEE--ICAPANRWSVRTVGDLSLLGDEPARRLRDAVESTTG 146
Query: 127 N-TGLNLFIAFNYSSRDEISRAIKNIFQ----DIESGSVCSHDVDSSLIAKYLDTSDVPD 181
N T ++ +A Y R EI A++ + D +G V + I++ L TS PD
Sbjct: 147 NGTAFHVNVAVAYGGRQEIVDAVRALLSKKLADGVTGEQLVEAVTAEAISENLYTSGQPD 206
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHAL 226
PDL+IRT GE+RLS FLLWQ AYSE F YWP F R F AL
Sbjct: 207 PDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAYWPAFRRVDFLRAL 251
>gi|212723440|ref|NP_001131688.1| hypothetical protein LOC100193048 [Zea mays]
gi|194692248|gb|ACF80208.1| unknown [Zea mays]
gi|224031727|gb|ACN34939.1| unknown [Zea mays]
Length = 303
Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 125/245 (51%), Gaps = 19/245 (7%)
Query: 4 SMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+++S P P HI IMDGN R+A R + AGHR G + E+G+K +T++A
Sbjct: 41 AILSYGPMPKHIAFIMDGNRRYAKFRSMQEGAGHRMGFSTLIASLMYCYEMGVKYITVYA 100
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKE 119
FSI+N++R SE+ L++L++ + + + + K N K+ GN L + + ++
Sbjct: 101 FSIDNFKRDPSEVESLMQLMEEKINELLENRSVINKINCKINFWGNLDLLYEPVRLAAEK 160
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNI-------FQDIESGSVCSHDVDSSL--- 169
T NTGL I Y+S EI A+ + FQ G H ++ +
Sbjct: 161 LMASTAGNTGLVFSICMPYNSTSEIVNAVSQVCAERMEMFQSEHIGECNGHAANNGVRSE 220
Query: 170 -----IAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFH 224
+ +++ +++ PDPD++IRT GE RLS+FLLWQ +S WP+FS
Sbjct: 221 ISVADLDRHMYSAECPDPDIVIRTSGETRLSNFLLWQTTFSHLQNPDPLWPEFSFRHLVW 280
Query: 225 ALNQY 229
A+ QY
Sbjct: 281 AVLQY 285
>gi|115466642|ref|NP_001056920.1| Os06g0167400 [Oryza sativa Japonica Group]
gi|5091516|dbj|BAA78751.1| putative cis-prenyltransferase [Oryza sativa Japonica Group]
gi|55296219|dbj|BAD67960.1| putative cis-prenyltransferase [Oryza sativa Japonica Group]
gi|113594960|dbj|BAF18834.1| Os06g0167400 [Oryza sativa Japonica Group]
gi|215717034|dbj|BAG95397.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635028|gb|EEE65160.1| hypothetical protein OsJ_20261 [Oryza sativa Japonica Group]
Length = 299
Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 128/243 (52%), Gaps = 15/243 (6%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ +++S P P HI IMDGN R+A R + +GHR G + E+G+K +T+
Sbjct: 39 IVAVLSYGPMPKHIAFIMDGNRRYAKFRSIQEGSGHRVGFSALIASLLYCYEMGVKYITV 98
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI+N++R +E+ L++L++ + + + + K N K+ GN L +
Sbjct: 99 YAFSIDNFKRDPTEVKSLMELMEEKINELLENRNVINKVNCKINFWGNLDMLSKSVRVAA 158
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAI-------KNIFQDIESGSVCSHDVDSSLI 170
++ T NTGL + Y+S EI A+ ++I Q ++ SV ++ V S +
Sbjct: 159 EKLMATTAENTGLVFSVCMPYNSTSEIVNAVNKVCAERRDILQREDADSVANNGVYSDIS 218
Query: 171 AKYLD----TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHAL 226
LD ++ PDPD++IRT GE RLS+FLLWQ +S WP+FS + A+
Sbjct: 219 VADLDRHMYSAGCPDPDIVIRTSGETRLSNFLLWQTTFSHLQNPDPLWPEFSFKHLVWAI 278
Query: 227 NQY 229
QY
Sbjct: 279 LQY 281
>gi|146302956|ref|YP_001190272.1| undecaprenyl pyrophosphate synthetase [Metallosphaera sedula DSM
5348]
gi|145701206|gb|ABP94348.1| Undecaprenyl pyrophosphate synthetase [Metallosphaera sedula DSM
5348]
Length = 255
Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 119/235 (50%), Gaps = 13/235 (5%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW-R 69
P+H+GII DGN RWA + + G + ++ ++G+KN+T+FA S N +
Sbjct: 27 PNHVGIIPDGNRRWARSNNSSINEAYLMGYKKLRNVLIWLLDLGVKNVTVFALSTENCTK 86
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNN------IKVRVIGNRLSLDDDILCVLKEAEDQ 123
R +E+ +I ++K+G + N IKVR IG + DD+ +K+ ++
Sbjct: 87 RTRTELD----VIMGYIKRGIEEMVTENFVDRYRIKVRAIGKLEMVSDDLRDTVKKVMER 142
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
+ L +A Y R EI A+ + +D + ++ KY ++ D D
Sbjct: 143 SASYLDRKLTLAICYGGRQEILDAVSRMIRDTNKKDLS--NLTEEEFRKYFYDEELSDID 200
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L+IRT GE R+S+FLLW +AYSE F YWPDF R + A+ Y R RRFG
Sbjct: 201 LVIRTSGEMRISNFLLWHLAYSELFFCEAYWPDFRRIDLWRAIRAYQRRVRRFGA 255
>gi|126436939|ref|YP_001072630.1| undecaprenyl pyrophosphate synthetase [Mycobacterium sp. JLS]
gi|126236739|gb|ABO00140.1| Undecaprenyl pyrophosphate synthetase [Mycobacterium sp. JLS]
Length = 263
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 116/225 (51%), Gaps = 8/225 (3%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S P HI ++ DGN RWA G + G+R G E++ GI+ T++ S
Sbjct: 29 SQLPRHIAVLCDGNRRWARDAGHDDVSYGYRVGAAKIAEMLRWCQAAGIEMATVYLLSTE 88
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
N +R E++EL+++I +++ N VR +G+ L D+ L++A + T
Sbjct: 89 NLQRDADELAELIEIITGVVEE--ICAPANRWSVRTVGDLSLLGDEPARRLRDAVESTTG 146
Query: 127 N-TGLNLFIAFNYSSRDEISRAIKNIFQ----DIESGSVCSHDVDSSLIAKYLDTSDVPD 181
N T ++ +A Y R EI A++ + D +G V + I++ L TS PD
Sbjct: 147 NGTAFHVNVAVAYGGRQEIVDAVRALLSKKLADGVTGEKLVEAVTAEAISENLYTSGQPD 206
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHAL 226
PDL+IRT GE+RLS FLLWQ AYSE F YWP F R F AL
Sbjct: 207 PDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAYWPAFRRVDFLRAL 251
>gi|108999735|ref|XP_001109446.1| PREDICTED: dehydrodolichyl diphosphate synthase-like isoform 4
[Macaca mulatta]
Length = 294
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 117/231 (50%), Gaps = 37/231 (16%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A+++ + P P HI IMDGN R+A + R GH +G E + +GI +T+
Sbjct: 16 CANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFSI N++R SE+ L+ L + + F L
Sbjct: 76 YAFSIENFKRSKSEVDGLMDLAR----QKFSRL--------------------------M 105
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E+Q LN + F Y+SR EIS A++ + +E G + D+ SL+ K L T+ P
Sbjct: 106 EEQCFLN------VCFAYTSRHEISNAVREMAWGVEQGLLDPSDISESLLDKCLYTNRSP 159
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
PD++IRT GE RLSDFLLWQ ++S VF P WP+++ F A+ Q+ +
Sbjct: 160 HPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQM 210
>gi|114554919|ref|XP_001143406.1| PREDICTED: dehydrodolichyl diphosphate synthase isoform 2 [Pan
troglodytes]
gi|114554921|ref|XP_001144219.1| PREDICTED: dehydrodolichyl diphosphate synthase isoform 11 [Pan
troglodytes]
Length = 294
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 117/231 (50%), Gaps = 37/231 (16%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A+++ + P P HI IMDGN R+A + R GH +G E + +GI +T+
Sbjct: 16 CANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFSI N++R SE+ L+ L + + F L
Sbjct: 76 YAFSIENFKRSKSEVDGLMDLAR----QKFSRL--------------------------M 105
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E+Q LN + F Y+SR EIS A++ + +E G + D+ SL+ K L T+ P
Sbjct: 106 EEQCFLN------VCFAYTSRHEISNAVREMAWGVEQGLLDPSDISESLLDKCLYTNRSP 159
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
PD++IRT GE RLSDFLLWQ ++S VF P WP+++ F A+ Q+ +
Sbjct: 160 HPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQM 210
>gi|76802908|ref|YP_331003.1| di-trans,poly-cis-decaprenylcistransferase 1; (Z)-prenyl
diphosphate synthase 1 [Natronomonas pharaonis DSM 2160]
gi|76558773|emb|CAI50366.1| di-trans,poly-cis-decaprenylcistransferase 1; (Z)-prenyl
diphosphate synthase 1 [Natronomonas pharaonis DSM 2160]
Length = 306
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 111/230 (48%), Gaps = 4/230 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S+ P H+ +I DGN R+A +G AGHR G E ++ A++G++ LT++AFS N
Sbjct: 21 SAAPSHVAVIQDGNRRYAETQGEAATAGHRAGAETTERVLEWCADLGVEELTLYAFSTEN 80
Query: 68 WRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
+ RP E L LI L++ + +++R IG L D + AE +T
Sbjct: 81 FERPPDEREALFDLIAEKLREFADHEEVHDREVRIRAIGQTHRLPDRVREAAAYAERRTE 140
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
L L IA Y R E+ ++I + +G + V I L DLI
Sbjct: 141 GYDALRLNIALAYGGRAELLDVARDIAAEAAAGDLDPEAVTVDEIESRLTAGPTQAVDLI 200
Query: 186 IRTGGEKRLSDFLLWQVAYSEFV--FIPEYWPDFSRELFFHALNQYNLRD 233
IRTGG++R S+FL W +E F YWP+FSR F A+ Y R+
Sbjct: 201 IRTGGDERTSNFLPWHANGNEAAVYFCTPYWPEFSRIDFLRAIRTYEARE 250
>gi|326776409|ref|ZP_08235674.1| undecaprenyl diphosphate synthase [Streptomyces cf. griseus
XylebKG-1]
gi|326656742|gb|EGE41588.1| undecaprenyl diphosphate synthase [Streptomyces cf. griseus
XylebKG-1]
Length = 260
Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 125/244 (51%), Gaps = 11/244 (4%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ A+++ P H+GI++DGN RWA G G+R G + GI+++T
Sbjct: 20 LAATLVGLPRPQHVGIMVDGNRRWARKAGHTDVREGYRAGGAKVTTFLGWCTAAGIEHVT 79
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
+F S +N RP E+ L+++I+ ++ + + + +VR IG+ L V KE
Sbjct: 80 LFMLSDDNLGRPAEELGPLIEVIEETVRD--ITAEGRDWEVRAIGSLDMLPAASARVFKE 137
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD-IESGS-----VCSHDVDSSLIAKY 173
A T GL + +A Y R EI A+++ F++ I +G +D I+++
Sbjct: 138 ATAATAGRGGLKVDVAVGYGGRREIVDAVRSAFEEHIAAGGDPAELAARFGIDD--ISRH 195
Query: 174 LDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
L + D IIRT GE+RLS FLLWQ AY+E ++ YWP F F AL Y R+
Sbjct: 196 LYSPVADHTDFIIRTSGEQRLSGFLLWQSAYAEMHWVDCYWPAFRHVDFLRALRSYANRE 255
Query: 234 RRFG 237
RRFG
Sbjct: 256 RRFG 259
>gi|324507560|gb|ADY43204.1| Dehydrodolichyl diphosphate synthase [Ascaris suum]
Length = 303
Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/225 (34%), Positives = 122/225 (54%), Gaps = 8/225 (3%)
Query: 5 MMSSSP-PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+M ++P P HI IMDGN R+A + GH KG + +I+ E+ IK +T++A
Sbjct: 25 LMKTAPMPKHIAFIMDGNRRYARSHCYSSVLDGHAKGFDQLTKILEWCRELCIKEVTVYA 84
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKE 119
FSI N+ R E+ L+ L ++ L++ F L + I VR G+ L + ++ +
Sbjct: 85 FSIENFNRAEEEVGGLMTLFENKLQRLFREKDKLIEKEISVRFFGDLSYLPTKVQKLVAQ 144
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV 179
E T+ + + Y+++DE+ RA I + I+ G + +D++ LI+ LD+
Sbjct: 145 IELLTKDYKKSVINVCIAYTAQDEMKRAFTYISRGIQKGLLEENDINEYLISHCLDSRKS 204
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFH 224
+PDL+IRT GEKRLSDFLLWQ + F WPDF F+H
Sbjct: 205 ANPDLLIRTSGEKRLSDFLLWQCSNCYIHFDDVLWPDFD---FWH 246
>gi|116753902|ref|YP_843020.1| undecaprenyl diphosphate synthase [Methanosaeta thermophila PT]
gi|116665353|gb|ABK14380.1| Undecaprenyl pyrophosphate synthetase [Methanosaeta thermophila PT]
Length = 264
Score = 128 bits (321), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 119/222 (53%), Gaps = 7/222 (3%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+H+ +I DGN R+A +P GHR G + +I E+GIK+LT++AFS N+ R
Sbjct: 30 EHVAVIQDGNRRYANRHNMPVSNGHRLGAKTTEKISDWCLELGIKHLTVYAFSTENFSRS 89
Query: 72 VSEISELVKLIKSFLKKGFYSLK--KNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
E + LI L + S K KN ++VR IG L + + +KE E T +
Sbjct: 90 EPEKRYIFNLITEKLLELCSSEKIHKNRVRVRAIGRIDMLPEYLQNAIKEVEAATEGYSQ 149
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYL-DTSDVPDP--DLII 186
+ L +A Y + E+ A + + +D+ +G + D+D L+ +YL T++ P P DLII
Sbjct: 150 MYLNVALAYGGQYELIDATRAMARDLRAGVIRISDLDEDLVGRYLYPTTETPVPKVDLII 209
Query: 187 RTGGEKRLSDFLLWQVAYSEFV--FIPEYWPDFSRELFFHAL 226
RTGGE R S+FL WQ SE F YWP+F + F A+
Sbjct: 210 RTGGEIRTSNFLPWQANGSECAAYFCAPYWPEFRKIDFLRAI 251
>gi|255018776|ref|ZP_05290902.1| hypothetical protein LmonF_15556 [Listeria monocytogenes FSL
F2-515]
Length = 179
Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 100/173 (57%)
Query: 30 LPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKG 89
LPR AGH++G++V + A +GI LT++AFS NW+RP E+ L+KL F
Sbjct: 7 LPRIAGHKEGMDVVKRVTRYANAIGIDVLTLYAFSTENWKRPTDEVDFLMKLPVEFFDSF 66
Query: 90 FYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIK 149
L + N++V V+G R +L D + +++A T TGL L A NY R EI A K
Sbjct: 67 VPELIEENVRVNVMGYRENLPDHTMRAVEKAIADTAHCTGLTLNFALNYGGRSEIITAAK 126
Query: 150 NIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQV 202
+++E + D+ + +L +S + DPDL+IRT GE RLS+F+LWQ+
Sbjct: 127 EAMKELELEGKSADDLTEEKLNDHLMSSGLGDPDLLIRTSGELRLSNFMLWQL 179
>gi|291446615|ref|ZP_06586005.1| uppS1 [Streptomyces roseosporus NRRL 15998]
gi|291349562|gb|EFE76466.1| uppS1 [Streptomyces roseosporus NRRL 15998]
Length = 255
Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 117/230 (50%), Gaps = 6/230 (2%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S+ P H+ +I+DGN RWA G GH G E++ ++G++ +T++ S +N
Sbjct: 17 SAVPRHMALILDGNRRWATVHGRTASEGHEAGFSRVPEVLRWCHDLGVETVTLWLLSTDN 76
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
RR +E+ L+++I + G + + ++ R G R + + +L L E +T N
Sbjct: 77 LRRDPAEVDALMRIITDLVN-GLAASDRWRLRHR--GVRAMVPEPLLTALDEVAARTTDN 133
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD---TSDVPDPDL 184
TG+ + +A Y R+E++ A + + + + + + A+ + +D P P+L
Sbjct: 134 TGMRVNLAICYGGREEVTEACRELLEGYAHEGLSPAEAARRVTAEAVTEAIAADDPAPEL 193
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
++RT GE+R S FLLW ++E F YWPDF + AL Y R R
Sbjct: 194 VVRTSGEQRSSGFLLWTARHAEHYFTTTYWPDFGYDDLKAALTHYERRSR 243
>gi|330796809|ref|XP_003286457.1| hypothetical protein DICPUDRAFT_150424 [Dictyostelium purpureum]
gi|325083580|gb|EGC37029.1| hypothetical protein DICPUDRAFT_150424 [Dictyostelium purpureum]
Length = 572
Score = 127 bits (320), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 128/245 (52%), Gaps = 11/245 (4%)
Query: 1 MVASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ S + + P P HIG+IMDGN R+A L GH+KG E+ + +G+K ++
Sbjct: 284 LACSTLKNGPIPKHIGVIMDGNRRFAERNHLQTKDGHKKGFNTMLELCQWSLALGVKIIS 343
Query: 60 IFAFSINNWRRPVSEISELVKLI-KSF--LKKGFYSLKKNNIKVRVIGNRLSLDDDILCV 116
++AFSI N++R SE+ +L+ L K F + + L++ +++RV+G+ + + +
Sbjct: 344 VYAFSIENFKRSKSEVEDLMDLANKKFEEMVSKSHKLQQLGVRIRVVGDFKHIPEKTQSI 403
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT 176
L A T N L I +Y++ EI ++K + + + S D+D L L
Sbjct: 404 LARAVKATENNNKALLNICLSYTAHAEILHSMKTLSNGVSDNLIESEDIDQDLFENCLYI 463
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS-----RELFFHALNQYNL 231
+ D D++IRT GE RLSDF+LWQ ++ + WPDFS +F + N+ L
Sbjct: 464 KE--DLDILIRTSGEYRLSDFMLWQSCFTNLALVGILWPDFSFLHFVYVIFIYQFNKKKL 521
Query: 232 RDRRF 236
++ F
Sbjct: 522 KNEIF 526
>gi|163784141|ref|ZP_02179082.1| Undecaprenyl pyrophosphate synthetase [Hydrogenivirga sp.
128-5-R1-1]
gi|159880585|gb|EDP74148.1| Undecaprenyl pyrophosphate synthetase [Hydrogenivirga sp.
128-5-R1-1]
Length = 145
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 93/148 (62%), Gaps = 6/148 (4%)
Query: 93 LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIF 152
L ++NIK++ IG R +L + IL ++E E++T+ +G+NL +A NYS R EI A+ I
Sbjct: 1 LIEDNIKLKFIGRRENLPEMILKTIEEGEEKTKNCSGMNLVVALNYSGRAEIVDAVNEII 60
Query: 153 QDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPE 212
+ + G + Y D+PDPDL+IRT GE+R+S+F+LWQ+AY+EF F P
Sbjct: 61 KSGKKG------ITEENFKNYFYFPDLPDPDLLIRTSGEQRISNFMLWQMAYTEFYFTPV 114
Query: 213 YWPDFSRELFFHALNQYNLRDRRFGGLS 240
WPDF + F AL Y R+RRFG ++
Sbjct: 115 LWPDFDEDEFLKALYDYQSRERRFGRIT 142
>gi|195565661|ref|XP_002106417.1| GD16139 [Drosophila simulans]
gi|194203793|gb|EDX17369.1| GD16139 [Drosophila simulans]
Length = 291
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 121/227 (53%), Gaps = 14/227 (6%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +MDGN R+A ++ + + GH +G E + + +VG++ +T FAFSI N++R
Sbjct: 27 PHHVAFVMDGNRRFARSQQIDKIEGHSRGFEKLADCLRWCLDVGVREVTTFAFSIENFKR 86
Query: 71 PVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
E+ L L + + L + L ++ I++RVIGN L D+ ++ A T N
Sbjct: 87 SNEEVEGLFNLAREKFARLLEETARLDEHGIRIRVIGNIELLPLDLQKLVASAMLSTERN 146
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L L +AF Y+SRDEI++ QD+ D+ L+ + L T P PDL+ R
Sbjct: 147 DKLFLNVAFAYTSRDEITQR-----QDL-----AGEDISERLLEECLYTRHSPPPDLVFR 196
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
T GE RLSDF++WQ++ S F WP + F ++ Y RDR
Sbjct: 197 TSGETRLSDFMMWQLSTSVLYFSNVLWPQITFWHFLASILAYQ-RDR 242
>gi|329893774|ref|ZP_08269862.1| Undecaprenyl pyrophosphate synthetase [gamma proteobacterium
IMCC3088]
gi|328923497|gb|EGG30811.1| Undecaprenyl pyrophosphate synthetase [gamma proteobacterium
IMCC3088]
Length = 170
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 102/164 (62%)
Query: 79 VKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNY 138
+ L +L+ L ++ ++++ IG R L ++ +++ +E T N L IA +Y
Sbjct: 1 MALFMRYLRNEVQELHEDGVQIKFIGRRDRLSARVVQLMERSEALTADNHRSTLVIAVDY 60
Query: 139 SSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFL 198
R +I++A + DI++G V ++ V+ +++++YL T +P+PDL IRTGG+ R+S+F+
Sbjct: 61 GGRWDIAQASLRLAADIQAGRVDANSVNETMMSEYLVTGHLPEPDLCIRTGGDARVSNFM 120
Query: 199 LWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
LWQ AY+EF F WPDF R F HAL + RDRRFGG +++
Sbjct: 121 LWQFAYTEFYFTDTLWPDFDRTAFEHALIDFGSRDRRFGGRNEE 164
>gi|182435784|ref|YP_001823503.1| putative undecaprenyl pyrophosphate synthetase [Streptomyces
griseus subsp. griseus NBRC 13350]
gi|178464300|dbj|BAG18820.1| putative undecaprenyl pyrophosphate synthetase [Streptomyces
griseus subsp. griseus NBRC 13350]
Length = 260
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 125/244 (51%), Gaps = 11/244 (4%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ A+++ P H+GI++DGN RWA G G+R G + GI+++T
Sbjct: 20 LAATLVGLPRPQHVGIMVDGNRRWARKAGHTDVREGYRAGGAKVTTFLGWCTAAGIEHVT 79
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
+F S +N RP E+ L+++I+ ++ + + + +VR IG+ L V KE
Sbjct: 80 LFMLSDDNLGRPAEELGPLIEVIEETVRD--ITAEGRDWEVRAIGSLDMLPAASARVFKE 137
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD-IESGS-----VCSHDVDSSLIAKY 173
A T GL + +A Y R EI A+++ F++ I +G +D I+++
Sbjct: 138 ATAATAGRGGLKVDVAVGYGGRREIVDAVRSAFEEHIAAGGDPAELAARFGIDD--ISRH 195
Query: 174 LDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
L + D IIRT GE+RLS FLLWQ AY+E ++ YWP F F AL Y R+
Sbjct: 196 LYSPVSDHTDFIIRTSGEQRLSGFLLWQSAYAEMHWVDCYWPAFRHVDFLRALRSYANRE 255
Query: 234 RRFG 237
RRFG
Sbjct: 256 RRFG 259
>gi|195626378|gb|ACG35019.1| dehydrodolichyl diphosphate synthase 6 [Zea mays]
Length = 303
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 124/245 (50%), Gaps = 19/245 (7%)
Query: 4 SMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+++S P P HI IMDGN R+A R + AGHR G + E+G+K +T++A
Sbjct: 41 AILSYGPMPKHIAFIMDGNRRYAKFRSMQEGAGHRMGFSTLIASLMYCYEMGVKYITVYA 100
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKE 119
FSI+N++R SE+ L++L++ + + + + K N K+ GN L + + ++
Sbjct: 101 FSIDNFKRDPSEVESLMQLMEEKINELLENRSVINKINCKINFWGNLDLLYEPVRLAAEK 160
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNI-------FQDIESGSVCSHDVDSSL--- 169
T NTGL I Y+S EI A+ + FQ G H ++ +
Sbjct: 161 LMASTAGNTGLVFSICMPYNSTSEIVNAVSEVCAERMEMFQSEHIGDCNGHAANNGVRSE 220
Query: 170 -----IAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFH 224
+ +++ ++ PDPD++IRT GE RLS+FLLWQ +S WP+FS
Sbjct: 221 ISVADLDRHMYSAGCPDPDIVIRTSGETRLSNFLLWQTTFSHLQNPDPLWPEFSFRHLVW 280
Query: 225 ALNQY 229
A+ QY
Sbjct: 281 AILQY 285
>gi|329766443|ref|ZP_08257987.1| undecaprenyl diphosphate synthase [Candidatus Nitrosoarchaeum
limnia SFB1]
gi|329137042|gb|EGG41334.1| undecaprenyl diphosphate synthase [Candidatus Nitrosoarchaeum
limnia SFB1]
Length = 227
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 119/226 (52%), Gaps = 4/226 (1%)
Query: 16 IIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEI 75
+I+DGN RWA GH KG + ++ E IK +T++A S N R E+
Sbjct: 1 MILDGNRRWAKRHLTIPKTGHWKGADAVENLLDWCEEFDIKIITLYALSAENLDRDDEEL 60
Query: 76 SELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLF 133
L +LI+ L+K + + KN ++V+ IG L + I +L + T+ L
Sbjct: 61 KHLYELIRIRLEKLYNDPRIHKNKMRVKGIGRIELLPESIREILDRLDVATKNYDNHFLN 120
Query: 134 IAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD--PDLIIRTGGE 191
IA Y ++E+ A+K I + I+ G++ D+ I L TS +P PD+I+RT GE
Sbjct: 121 IALAYGGQNELVDAVKKIAEKIKVGTLDVKDISKKEIESNLYTSHLPQSSPDMILRTSGE 180
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
KRLS FL+WQ AYSE +F+ +WP+F + A+ + R RR G
Sbjct: 181 KRLSGFLMWQSAYSELIFMDIFWPEFRKIDLMRAIRTFQERKRRLG 226
>gi|268536404|ref|XP_002633337.1| C. briggsae CBR-KLP-12 protein [Caenorhabditis briggsae]
gi|187034478|emb|CAP26295.1| CBR-KLP-12 protein [Caenorhabditis briggsae AF16]
Length = 1874
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 117/219 (53%), Gaps = 8/219 (3%)
Query: 6 MSSSP-PDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++S P P H+ +MDGN R+A + L GH KG +I+ + GI+ +T++AF
Sbjct: 31 IASGPIPRHVAFVMDGNRRFAKNKNLGSVIKGHEKGFVQLAKILDWCSRFGIREITVYAF 90
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
SI N++R E+ L++L + +K L + I R GNR L + ++ +
Sbjct: 91 SIENFKRSEDEVGGLMRLAEEKFQKLLNDSEKLDEKRICFRFYGNRTLLSARLQKLMSDI 150
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS--D 178
E +T G L + Y+SRDEISR+ + I ++ G + D++ S+I LD+
Sbjct: 151 EGRTEKFEGGRLNVCMPYTSRDEISRSFETIRTHVKEGKLNVEDINESMIDACLDSGCGG 210
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDF 217
P PDL IRT GE RLSDF++WQ A + F WP+F
Sbjct: 211 TP-PDLFIRTSGEHRLSDFMMWQAADTHIYFDSVLWPEF 248
>gi|124027955|ref|YP_001013275.1| undecaprenyl pyrophosphate synthetase [Hyperthermus butylicus DSM
5456]
gi|123978649|gb|ABM80930.1| Undecaprenyl pyrophosphate synthetase [Hyperthermus butylicus DSM
5456]
Length = 244
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 114/230 (49%), Gaps = 9/230 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN-WR 69
P HI II DGN RWA +GLP AGH G V + E+G+ +T +A S N R
Sbjct: 20 PRHIAIIPDGNRRWARKQGLPVYAGHAAGYRVARRTLDLLWELGVDYVTFYALSRENCLR 79
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRV--IGNRLSLDDDILCVLKEAEDQTRLN 127
RP+ E L KL+ + + N VRV +G+ L + L+E T N
Sbjct: 80 RPLEEREHLYKLLLRAIDDLLTDPRVVNGSVRVYFVGDFTLLPGQLAERLEEVNAATATN 139
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L IA Y R E+ ++++ G V + D + K + +P+PDL+IR
Sbjct: 140 GPNVLTIATCYGGRWEVLETLRSL---ATKGFVPN---DEEELRKLMPLGLLPEPDLLIR 193
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
TGGE RLS FLL+ VAY+E F WP+F AL Y +R+RRFG
Sbjct: 194 TGGELRLSGFLLYHVAYTELYFTRRLWPEFDEFELLRALRSYQMRERRFG 243
>gi|256079779|ref|XP_002576162.1| dehydrodolichyl diphosphate synthase (dedol-pp synthase)
[Schistosoma mansoni]
gi|238661424|emb|CAZ32397.1| dehydrodolichyl diphosphate synthase (dedol-pp synthase), putative
[Schistosoma mansoni]
Length = 311
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 126/226 (55%), Gaps = 5/226 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IMDGN R+A + L + GH G +E + ++GI+ ++IF FSI+N+ R
Sbjct: 27 PKHVAFIMDGNRRFADGKMLKKSDGHLHGFTKLSETLQWCRDIGIEEVSIFTFSIDNFNR 86
Query: 71 PVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
E+S L+ L + L++ + LK ++I +RVIGN L + + + TR +
Sbjct: 87 SHEEVSFLMNLAEEKLQELLDNKDELKADDICIRVIGNLALLPAKVQSLAAQLMLVTRNH 146
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+ L I Y+SR++I+ A++ + ++ G + D+ L++K L T DL+IR
Sbjct: 147 SKSILNICMAYNSRNDITNAMEIVRLGVKEGKIIPSDITRELLSKCLYTRLSKPLDLLIR 206
Query: 188 TGGEKRLSDFLLWQVAYSE--FVFIPEYWPDFSRELFFHALNQYNL 231
T GE RLSDFL WQV+ ++ + FI YWP+FS F ++ Y +
Sbjct: 207 TSGEIRLSDFLTWQVSENDTIYKFINNYWPEFSWWDFLSSIIHYQM 252
>gi|13278672|gb|AAH04117.1| DHDDS protein [Homo sapiens]
gi|119628213|gb|EAX07808.1| dehydrodolichyl diphosphate synthase, isoform CRA_c [Homo sapiens]
gi|119628214|gb|EAX07809.1| dehydrodolichyl diphosphate synthase, isoform CRA_c [Homo sapiens]
Length = 294
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 117/231 (50%), Gaps = 37/231 (16%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A+++ + P P HI IMDGN R+A + R GH +G E + +GI +T+
Sbjct: 16 CANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFSI N++R SE+ L+ L + + F L
Sbjct: 76 YAFSIENFKRSKSEVDGLMDLAR----QKFSRL--------------------------M 105
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E++ LN + F Y+SR EIS A++ + +E G + D+ SL+ K L T+ P
Sbjct: 106 EEKCFLN------VCFAYTSRHEISNAVREMAWGVEQGLLDPSDISESLLDKCLYTNRSP 159
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
PD++IRT GE RLSDFLLWQ ++S VF P WP+++ F A+ Q+ +
Sbjct: 160 HPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQM 210
>gi|71993029|ref|NP_001023351.1| hypothetical protein T01G1.4 [Caenorhabditis elegans]
gi|58081826|emb|CAI46583.1| C. elegans protein T01G1.4, confirmed by transcript evidence
[Caenorhabditis elegans]
Length = 299
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 119/223 (53%), Gaps = 6/223 (2%)
Query: 1 MVASMMSSSP-PDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNL 58
++ ++S P P H+ +MDGN R+A + L GH KG +I+ GI+ +
Sbjct: 26 LLRRFIASGPIPRHVAFVMDGNRRFAKTKHLGNVIKGHEKGFTQLAKILDWCNRFGIREI 85
Query: 59 TIFAFSINNWRRPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILC 115
T++AFSI N++R E+S L++L + +K L + I R GNR L +
Sbjct: 86 TVYAFSIENFKRSEEEVSGLMRLAEEKFQKLLNDSEKLDEKRICFRFYGNRSLLSSRLQK 145
Query: 116 VLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD 175
++ + E +T G L + Y+SRDEI+R+ + I + ++ G V +++ S+I LD
Sbjct: 146 LMSDIEHRTENFDGGRLNVCMPYTSRDEIARSFETIRKHVKDGKVNVDEINESMIDACLD 205
Query: 176 T-SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDF 217
+ PDL IRT GE RLSDFL+WQ + + F WP+F
Sbjct: 206 SGCGGTSPDLFIRTSGEHRLSDFLMWQASETHVYFDDVLWPEF 248
>gi|146422394|ref|XP_001487136.1| hypothetical protein PGUG_00513 [Meyerozyma guilliermondii ATCC
6260]
Length = 317
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 118/213 (55%), Gaps = 10/213 (4%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGN R+A + + GH G E ++ E G++ T++AFSI N++R
Sbjct: 32 PKHVAIIMDGNRRYARSHKMEIREGHNIGFETMASVLELLFEAGVECATVYAFSIENFKR 91
Query: 71 PVSEISELVKLIKSFL---KKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
E+ L+ + + L ++ +K +++RV+GNR L D+ +++E ED T+ N
Sbjct: 92 LAYEVEALMDMARLRLCQIRQHGELCEKYGVRLRVVGNRKLLPVDVQQIVQETEDMTKNN 151
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T L++ F Y++RD++++ I+N+ ES ++ S +L T P DL+IR
Sbjct: 152 TRAVLYMCFPYTARDDMTQLIRNVVA--ESLINPEFEISESAFNHFLYT---PPLDLLIR 206
Query: 188 TGGEKRLSDFLLWQ--VAYSEFVFIPEYWPDFS 218
T G RLSDFLLWQ + VF WP+FS
Sbjct: 207 TSGTYRLSDFLLWQSVLPKCSVVFSDRLWPEFS 239
>gi|126540559|emb|CAM46104.1| dehydrodolichyl diphosphate synthase [Mus musculus]
gi|126541191|emb|CAM46081.1| dehydrodolichyl diphosphate synthase [Mus musculus]
Length = 294
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/241 (32%), Positives = 119/241 (49%), Gaps = 40/241 (16%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A+++ + P P HI IMDGN R+A + R GH +G E + +GI +T+
Sbjct: 16 CANIIKAGPVPKHIAFIMDGNRRYAKKCQVERQEGHTQGFNKLAETLRWCLNLGILEVTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFSI N++R SE+ L+ L + C++
Sbjct: 76 YAFSIENFKRSKSEVDGLLDLAR---------------------------QKFSCLM--- 105
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E+Q LN + F Y+SR EI+ A++ + +E G + DV SL+ K L ++ P
Sbjct: 106 EEQCFLN------VCFAYTSRHEIANAVREMAWGVEQGLLEPSDVSESLLDKCLYSNHSP 159
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
PD++IRT GE RLSDFLLWQ ++S VF P WP+++ A+ Q+ R G L
Sbjct: 160 HPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLCEAILQFQ---RNHGALQ 216
Query: 241 K 241
K
Sbjct: 217 K 217
>gi|254363994|ref|ZP_04980040.1| short chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis str. Haarlem]
gi|134149508|gb|EBA41553.1| short chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis str. Haarlem]
Length = 262
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 122/232 (52%), Gaps = 7/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI ++ DGN RWA + G + G+R G E++ E GI+ T++ S N +
Sbjct: 32 PRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWCHEAGIELATVYLLSTENLQ 91
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E++ L+++I +++ N+ VR +G+ + ++ L+ A + T
Sbjct: 92 RDPDELAALIEIITDVVEE--ICAPANHWSVRTVGDLGLIGEEPARRLRGAVESTPEVAS 149
Query: 130 LNLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDSSL---IAKYLDTSDVPDPDLI 185
++ +A Y R EI A++ + +++ +G+ VD+ I++ L TS PDPD +
Sbjct: 150 FHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVDAVTVEGISENLYTSGQPDPDSV 209
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRT GE+RLS FLLWQ AYSE F +WP F F AL Y+ R R +G
Sbjct: 210 IRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDFLRALRDYSARHRSYG 261
>gi|254577167|ref|XP_002494570.1| ZYRO0A04598p [Zygosaccharomyces rouxii]
gi|238937459|emb|CAR25637.1| ZYRO0A04598p [Zygosaccharomyces rouxii]
Length = 285
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 116/218 (53%), Gaps = 11/218 (5%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+S+S P H+G +MDGN R+A + GH G ++++ + G+ T+FAFSI
Sbjct: 28 VSNSAPKHVGFVMDGNRRYAKKMDIEVKEGHEAGYMSMSKVLELCYQAGVDTATVFAFSI 87
Query: 66 NNWRRPVSEISELVKL----IKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
N++R E+ L++L I+ KG + +K I+V+VIG+ L DI +K
Sbjct: 88 ENFKRSSLEVDNLMQLARERIRQLADKGELA-EKYGIRVKVIGDLTLLPKDIYKEVKRTT 146
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
D T+ NT L I F Y+ R+EI ++K + S V ++ + K+L T D P
Sbjct: 147 DLTKNNTRATLNICFPYTGREEIFHSVKELI----SEDVPIDSINEICLEKHLYTGDSPP 202
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFV--FIPEYWPDF 217
DL++RT G RLSDF+LWQ + V I WP+F
Sbjct: 203 LDLLVRTSGVSRLSDFMLWQASNKGVVIELIDRLWPEF 240
>gi|225709932|gb|ACO10812.1| Dehydrodolichyl diphosphate synthase [Caligus rogercresseyi]
Length = 267
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 121/220 (55%), Gaps = 6/220 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+++ + + + P H+ IMDGN R+A + GH G + +E + ++GI+ +T+
Sbjct: 20 LMSILQTGALPRHVAFIMDGNRRFARKSQVDLIRGHSSGFDKLSETLFWCRDLGIEEVTV 79
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++RP E+ EL++L + K+ LK+ ++V+V+GN L +D+ +
Sbjct: 80 YAFSIENFKRPQKEVQELMELAREKFKRLLSETERLKEKGVRVQVLGNLSLLPEDLQKTI 139
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+ + T+ + L +AF Y+SR+E++ +I+ D S + ++ + Y
Sbjct: 140 GQCVNATKGHNKCTLNVAFAYTSREELTSSIRRAATDPSSQNTT---LNPKSLENYFYGE 196
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDF 217
DL+IRT GE RLSDF+LWQ +Y+ F WP+F
Sbjct: 197 GSRRVDLLIRTSGEVRLSDFMLWQSSYAVTYFTQVLWPEF 236
>gi|223944707|gb|ACN26437.1| unknown [Zea mays]
gi|238009764|gb|ACR35917.1| unknown [Zea mays]
Length = 412
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 123/247 (49%), Gaps = 18/247 (7%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++AS+ P HI IMDGN R+A R + AGHR G + E+G+K +T+
Sbjct: 148 LIASLSYGPMPKHIAFIMDGNRRYAKFRSMQEGAGHRMGFSTLIASLMYCYEMGVKYITV 207
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI+N++R SE+ L++L++ + + + + K K+ GN L + +
Sbjct: 208 YAFSIDNFKRDPSEVESLMQLMEEKINELLENQSVINKIKCKINFWGNLDLLYEPVRLAA 267
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNI-------FQDIESGSVCSH------- 163
++ T NTGL I Y+S EI A+ + FQ G H
Sbjct: 268 EKLMASTAGNTGLVFSICMPYNSTSEIVNAVSEVCAERMEMFQSEHIGDCNGHAANNGVR 327
Query: 164 -DVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELF 222
++ + + +++ ++ PDPD++IRT GE RLS+FLLWQ +S WP+FS
Sbjct: 328 SEISVAELDRHMYSAGCPDPDIVIRTSGETRLSNFLLWQTTFSHLQNPDPLWPEFSFRHL 387
Query: 223 FHALNQY 229
A+ QY
Sbjct: 388 VWAILQY 394
>gi|56206244|emb|CAI21496.1| dehydrodolichyl diphosphate synthase [Homo sapiens]
Length = 216
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 117/231 (50%), Gaps = 37/231 (16%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A+++ + P P HI IMDGN R+A + R GH +G E + +GI +T+
Sbjct: 16 CANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFSI N++R SE+ L+ L + + F L
Sbjct: 76 YAFSIENFKRSKSEVDGLMDLAR----QKFSRL--------------------------M 105
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E++ LN + F Y+SR EIS A++ + +E G + D+ SL+ K L T+ P
Sbjct: 106 EEKCFLN------VCFAYTSRHEISNAVREMAWGVEQGLLDPSDISESLLDKCLYTNRSP 159
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
PD++IRT GE RLSDFLLWQ ++S VF P WP+++ F A+ Q+ +
Sbjct: 160 HPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQM 210
>gi|170782747|ref|YP_001711081.1| putative undecaprenyl pyrophosphate synthetase [Clavibacter
michiganensis subsp. sepedonicus]
gi|169157317|emb|CAQ02504.1| putative undecaprenyl pyrophosphate synthetase [Clavibacter
michiganensis subsp. sepedonicus]
Length = 261
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 125/233 (53%), Gaps = 9/233 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEV-FNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI +I+DGN RWA GL A + F E + ++ IK T++ S +N
Sbjct: 31 PHHIAMILDGNRRWARQLGLESAAHGHRAGAAKFLEFLEWCDDLDIKVTTLYLLSTDNLT 90
Query: 70 -RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
R +E++ L+ +I + K + +V+ +G+ L +++ L +E++++ N
Sbjct: 91 GRGSAELTALIDIIGELAED---LSKHRDWRVKHVGSDEGLPPELIARLDASEERSQGNG 147
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDS----SLIAKYLDTSDVPDPDL 184
GL++ +A Y R EI+ A+++I Q D+ + LI ++L TS PDPDL
Sbjct: 148 GLHINLAVGYGGRTEIADAMRSIVQQHHLAGGTLEDLAALLTPDLIGEHLYTSGQPDPDL 207
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+IRT GE+R+SDF+LWQ A+SE F+ PD F AL Y+ R RRFG
Sbjct: 208 VIRTSGEQRISDFMLWQSAHSELYFMEALGPDLREVDFLRALRDYSSRQRRFG 260
>gi|292656443|ref|YP_003536340.1| undecaprenyl diphosphate synthase [Haloferax volcanii DS2]
gi|291371400|gb|ADE03627.1| undecaprenyl diphosphate synthase [Haloferax volcanii DS2]
Length = 309
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 117/228 (51%), Gaps = 4/228 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ II DGN R+A G GH+ G + +++ E+GI+ LT++ FS N+ R
Sbjct: 25 PTHVAIIQDGNRRYARKNGDDAPDGHKAGAQTTEDVLTWCEELGIEELTLYTFSTENFDR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNN--IKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
P E L LI+ L + S + ++ + VR IG L D + ++ AE +T
Sbjct: 85 PEHERGPLFDLIEDKLYEFADSERVHDREVAVRAIGEVHLLPDRVRDAVEYAESRTADYD 144
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
G L IA Y R E+ A +++ + +E G + +VD S + + L V D DLIIR
Sbjct: 145 GFTLNIALAYGGRAELLGAARDVCRAVERGDLSPDEVDVSAVDRRLSRKPVRDVDLIIRP 204
Query: 189 GGEKRLSDFLLWQVAYSEFV--FIPEYWPDFSRELFFHALNQYNLRDR 234
GG++R S+FL W +E F YWP+FS+ F + Y R++
Sbjct: 205 GGDERTSNFLPWHANGNEAAVYFCAPYWPEFSKVDFLRGIRTYESREQ 252
>gi|239943134|ref|ZP_04695071.1| hypothetical protein SrosN15_19226 [Streptomyces roseosporus NRRL
15998]
gi|239989592|ref|ZP_04710256.1| hypothetical protein SrosN1_19986 [Streptomyces roseosporus NRRL
11379]
Length = 254
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 124/244 (50%), Gaps = 10/244 (4%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGL--PRCAGHRKGIEVFNEIVAAAAEVGIKNL 58
+ A + P HIGI++DGN RWA G PR G++ G + + I+++
Sbjct: 13 LSARLAGRPRPGHIGIMLDGNRRWAKVAGYKDPR-EGYKAGGAKVVQFLQWCGSAEIEHV 71
Query: 59 TIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
T+F S +N RP E+ L+ +I+ + + + N V ++G L + LK
Sbjct: 72 TLFMLSDDNLNRPERELLPLIGVIEDVVDQ--LAAPANPWVVEIVGALDLLPAESANRLK 129
Query: 119 EAEDQTRLNTG-LNLFIAFNYSSRDEISRAIKN-IFQDIESGSVCSHDVDS---SLIAKY 173
A +T TG + IA Y R EI A+++ I + E G ++ I+K+
Sbjct: 130 RAAAETHGRTGGTRVDIAVGYGGRREIVHAVRSAILEHGERGGDLEELAETFTMEHISKH 189
Query: 174 LDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
L + P+ DLIIRT GE+RLS FLLWQ AY+E F YWPDF F AL Y+ RD
Sbjct: 190 LYSKVRPESDLIIRTSGEQRLSGFLLWQSAYAEVYFCECYWPDFREIDFLRALRSYSERD 249
Query: 234 RRFG 237
RR+G
Sbjct: 250 RRYG 253
>gi|307711002|ref|ZP_07647424.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus mitis
SK321]
gi|307616964|gb|EFN96142.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus mitis
SK321]
Length = 165
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 86/152 (56%), Gaps = 4/152 (2%)
Query: 92 SLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNI 151
L NN+K+++IG L L +AE+ T+ NTGL L A NY R EI++A+K I
Sbjct: 14 ELHANNVKIQMIGETDRLPKQTFEALTKAEELTKNNTGLILNFALNYGGRAEITQALKLI 73
Query: 152 FQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLIIRTGGEKRLSDFLLWQVAYSEF 207
QD+ + D+ LI YL T +P DPDLIIRT GE RLS+FL WQ AYSE
Sbjct: 74 SQDVLDAKINPGDITEELIGNYLFTQHLPKDLRDPDLIIRTSGELRLSNFLPWQGAYSEL 133
Query: 208 VFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
F WPDF A+ YN R RRFGG+
Sbjct: 134 YFTDTLWPDFDEAALQEAILAYNRRHRRFGGV 165
>gi|18398467|ref|NP_565420.1| undecaprenyl pyrophosphate synthetase family protein / UPP
synthetase family protein [Arabidopsis thaliana]
gi|84029498|sp|Q8S2T1|DDPS6_ARATH RecName: Full=Dehydrodolichyl diphosphate synthase 6;
Short=Dedol-PP synthase 6
gi|20198261|gb|AAD32914.2| expressed protein [Arabidopsis thaliana]
gi|61742588|gb|AAX55115.1| hypothetical protein At2g17570 [Arabidopsis thaliana]
gi|330251560|gb|AEC06654.1| dehydrodolichyl diphosphate synthase 6 [Arabidopsis thaliana]
Length = 295
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 123/242 (50%), Gaps = 26/242 (10%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IMDGN R+A GL +GH+ G ++ E+GIK +TI+AFSI+N+RR
Sbjct: 40 PCHIAFIMDGNRRYAKKCGLLDGSGHKAGFSALMSMLQYCYELGIKYVTIYAFSIDNFRR 99
Query: 71 PVSEISELVKL----IKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
E+ ++ L IKS L+K + + I+V IGN L+D + ++ T
Sbjct: 100 KPEEVESVMDLMLEKIKSLLEKESI-VHQYGIRVYFIGNLALLNDQVRAAAEKVMKATAK 158
Query: 127 NTGLNLFIAFNYSSRDEISRAIK----NIFQDIESGSVCSHDVDSSL------------- 169
N+ + L I Y+S DEI +A+K N +IE+ + D DS +
Sbjct: 159 NSRVVLLICIAYNSTDEIVQAVKKSCINKSDNIEASNYKHEDSDSDIEGTDMENQEKKIQ 218
Query: 170 ---IAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS-RELFFHA 225
I + + S P+PD++IR+ GE RLS+FLLWQ ++ WP+ R L +
Sbjct: 219 LVDIEENMQMSVAPNPDILIRSSGETRLSNFLLWQTGNTQLCSPAALWPEIGLRHLLWAI 278
Query: 226 LN 227
LN
Sbjct: 279 LN 280
>gi|291446610|ref|ZP_06586000.1| undecaprenyl pyrophosphate synthetase 2 [Streptomyces roseosporus
NRRL 15998]
gi|291349557|gb|EFE76461.1| undecaprenyl pyrophosphate synthetase 2 [Streptomyces roseosporus
NRRL 15998]
Length = 260
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 124/244 (50%), Gaps = 10/244 (4%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGL--PRCAGHRKGIEVFNEIVAAAAEVGIKNL 58
+ A + P HIGI++DGN RWA G PR G++ G + + I+++
Sbjct: 19 LSARLAGRPRPGHIGIMLDGNRRWAKVAGYKDPR-EGYKAGGAKVVQFLQWCGSAEIEHV 77
Query: 59 TIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
T+F S +N RP E+ L+ +I+ + + + N V ++G L + LK
Sbjct: 78 TLFMLSDDNLNRPERELLPLIGVIEDVVDQ--LAAPANPWVVEIVGALDLLPAESANRLK 135
Query: 119 EAEDQTRLNTG-LNLFIAFNYSSRDEISRAIKN-IFQDIESGSVCSHDVDS---SLIAKY 173
A +T TG + IA Y R EI A+++ I + E G ++ I+K+
Sbjct: 136 RAAAETHGRTGGTRVDIAVGYGGRREIVHAVRSAILEHGERGGDLEELAETFTMEHISKH 195
Query: 174 LDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
L + P+ DLIIRT GE+RLS FLLWQ AY+E F YWPDF F AL Y+ RD
Sbjct: 196 LYSKVRPESDLIIRTSGEQRLSGFLLWQSAYAEVYFCECYWPDFREIDFLRALRSYSERD 255
Query: 234 RRFG 237
RR+G
Sbjct: 256 RRYG 259
>gi|150864446|ref|XP_001383263.2| hypothetical protein PICST_41956 [Scheffersomyces stipitis CBS
6054]
gi|149385702|gb|ABN65234.2| cis-prenyltransferase [Scheffersomyces stipitis CBS 6054]
Length = 343
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 123/237 (51%), Gaps = 16/237 (6%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P H+GIIMDGN R+A + GH G + ++ E G+K +++AFS
Sbjct: 26 IQTGPTPKHVGIIMDGNRRYAKNHKIEIKEGHNLGFDSMANVLEILYESGVKCASVYAFS 85
Query: 65 INNWRRPVSEISELVKLIKS-FLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N+RR E+ L+ L KS F + +S + I++++IGN+ + D+ +L++ E
Sbjct: 86 IENFRRSSLEVKWLMDLAKSKFQQINQHSDLCAEYGIRIKIIGNKKLIPPDVAKILQQTE 145
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD--VDSSLIAKYLDTSDV 179
+ T+ N L I F Y+SRDE++ +IK S HD +D + T D
Sbjct: 146 EITKDNKRALLNICFPYTSRDEMTNSIKCAVDQ----STIDHDFVIDEDTLESLFYTHDA 201
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSE--FVFIPEYWP-----DFSRELFFHALNQY 229
P DL++RT G RLSDFLLWQ + VF+ + WP D ++ LF N Y
Sbjct: 202 PPLDLLVRTSGTFRLSDFLLWQCVSPDCSIVFVDKLWPAFTPFDMAKILFNWGFNMY 258
>gi|328869193|gb|EGG17571.1| Dehydrodolichyl diphosphate synthase [Dictyostelium fasciculatum]
Length = 383
Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 119/222 (53%), Gaps = 5/222 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+IMDGN R+A + GH+ G ++ +G++ ++++AFSI N++R
Sbjct: 112 PKHIGVIMDGNRRFARKLHIETSEGHKLGFTKMLDLCQWGLALGVEIISVYAFSIENFKR 171
Query: 71 PVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
P E+ L+ L ++ + L+K I++RV+G+ + + +L A T+ N
Sbjct: 172 PKQEVEYLMDLANKKFEEMISKTHKLQKMGIRIRVVGDLSYIPEKTKSILARAVLATQHN 231
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T L + +Y+S +E+ ++ I ++ + D++ L K L D D D+++R
Sbjct: 232 TRALLNVCMSYTSHNEMLHSMNTISNAVKDNVLLPEDINQELFEKCLYIPD--DLDILVR 289
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQY 229
T GE RLSDF+LWQ +S F+ WPDFS FF+ + Y
Sbjct: 290 TSGEYRLSDFMLWQTCFSGTNFLNVLWPDFSSFHFFYIIFLY 331
>gi|148273420|ref|YP_001222981.1| putative undecaprenyl diphosphate synthase [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
gi|147831350|emb|CAN02306.1| putative undecaprenyl diphosphate synthase [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
Length = 261
Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 125/233 (53%), Gaps = 9/233 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEV-FNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI +I+DGN RWA GL A + F E + ++ IK T++ S +N
Sbjct: 31 PHHIAMILDGNRRWARQLGLESAAHGHRAGAAKFLEFLEWCDDLDIKVTTLYLLSTDNLT 90
Query: 70 -RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
R +E++ L+ +I + + + +V+ +G+ L +++ L +E++++ N
Sbjct: 91 GRGSAELTALIDIIGELAED---LSRHRDWRVKHVGSDEGLPLELIARLDASEERSKGNA 147
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDS----SLIAKYLDTSDVPDPDL 184
GL++ +A Y R EI+ A+++I Q D+ + LI ++L TS PDPDL
Sbjct: 148 GLHINLAVGYGGRTEIADAMRSIVQQHHLAGGTLEDLAALLTPDLIGEHLYTSGQPDPDL 207
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+IRT GE+R+SDF+LWQ A+SE F+ PD F AL Y+ R RRFG
Sbjct: 208 VIRTSGEQRISDFMLWQSAHSELYFMEALGPDLREVDFLRALRDYSSRQRRFG 260
>gi|297832372|ref|XP_002884068.1| undecaprenyl pyrophosphate synthetase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297329908|gb|EFH60327.1| undecaprenyl pyrophosphate synthetase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 296
Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 123/243 (50%), Gaps = 27/243 (11%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IMDGN R+A L +GH+ G ++ E+GIK +TI+AFSI+N+RR
Sbjct: 40 PSHLAFIMDGNRRYAKKHSLEDGSGHQAGFSALMSMLQYCYELGIKYVTIYAFSIDNFRR 99
Query: 71 PVSEISELVKL----IKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
E+ L+ L IKS L+K + + I+V IGN L+D + ++ T
Sbjct: 100 KPEEVQSLMDLMLEKIKSLLEKESI-VHQYGIRVYFIGNLALLNDQVRAAAEKVMKATAK 158
Query: 127 NTGLNLFIAFNYSSRDEISRAIK----NIFQDIE-SGSVCSHDVDSSL------------ 169
N+ + L I Y+S DEI +A+K N +IE SG+ D DS +
Sbjct: 159 NSRVVLLICIAYNSTDEIVQAVKKSCINTSDNIEASGNYKHEDRDSDIEGTDMENQEKRI 218
Query: 170 ----IAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS-RELFFH 224
I + + S PDPD+++R+ GE RLS+FLLWQ ++ WP+ + L +
Sbjct: 219 QLVDIEENMRMSVAPDPDILVRSSGETRLSNFLLWQTGNTQLFSPAALWPEIGLKHLLWA 278
Query: 225 ALN 227
LN
Sbjct: 279 VLN 281
>gi|322368359|ref|ZP_08042928.1| undecaprenyl pyrophosphate synthase [Haladaptatus paucihalophilus
DX253]
gi|320552375|gb|EFW94020.1| undecaprenyl pyrophosphate synthase [Haladaptatus paucihalophilus
DX253]
Length = 313
Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 120/233 (51%), Gaps = 4/233 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P H+ +I DGN R+A+ +G GHR+G + ++ E+G++ LT++ FS N
Sbjct: 28 SGAPAHVAVIQDGNRRYASKQGGEASDGHREGAKTTERVLDWCDEIGVEELTLYTFSTEN 87
Query: 68 WRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
+ RP E L L+++ L + + + + +R IG+ L + + AE QT
Sbjct: 88 FERPDHEREALFDLLENKLYEFADAERVHDSGVCIRAIGDVQQLPPRVREAIDYAERQTG 147
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
L IA Y R+E+ A +++ +++ESG++ D+ I L + D DLI
Sbjct: 148 DYDNFVLNIALAYGGRNELLGAARDVAREVESGNLDPADISVETIESRLYARPLRDVDLI 207
Query: 186 IRTGGEKRLSDFLLWQVAYSEFV--FIPEYWPDFSRELFFHALNQYNLRDRRF 236
IRTGG++R S+FL W +E F YWP+FS+ F A+ Y R + F
Sbjct: 208 IRTGGDERTSNFLPWHANGNEAAVFFCTPYWPEFSKIDFLRAVRTYESRAQSF 260
>gi|88602078|ref|YP_502256.1| undecaprenyl diphosphate synthase [Methanospirillum hungatei JF-1]
gi|88187540|gb|ABD40537.1| Undecaprenyl pyrophosphate synthetase [Methanospirillum hungatei
JF-1]
Length = 258
Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 115/229 (50%), Gaps = 6/229 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI II DGN R+A RG+ +GHR G + E++ A E+GI+++T++ FS N+ R
Sbjct: 22 PRHIAIIQDGNRRYAKKRGIATSSGHRAGADRTEEVLEWAQELGIRHITLYTFSTENFTR 81
Query: 71 PVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
E+ L L K L + + K I++++IG++ L DD+ +++AE T
Sbjct: 82 SDEEVQNLFALFKEKLSRISIDERVHKYGIRIQMIGDKDMLPDDLRGAVEQAEAATAHYD 141
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAK--YLDTSDVPDPDLII 186
L +A Y R+E+ R I D+ + D+ L + Y ++ +P DLII
Sbjct: 142 NFYLNMALAYGGRNEMLRTTAKILDDVRKKKIKREDITPELFEENLYGNSVSLPPVDLII 201
Query: 187 RTGGEKRLSDFLLWQV--AYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
RTG E R S+FL W S F YWP F + A+ Y+ R
Sbjct: 202 RTGNECRTSNFLPWLANGHESAVYFCAPYWPMFRKLDMLRAIRVYSERQ 250
>gi|323359457|ref|YP_004225853.1| undecaprenyl pyrophosphate synthase [Microbacterium testaceum
StLB037]
gi|323275828|dbj|BAJ75973.1| undecaprenyl pyrophosphate synthase [Microbacterium testaceum
StLB037]
Length = 257
Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 133/238 (55%), Gaps = 9/238 (3%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEV-FNEIVAAAAEVGIKNLTIFAFS 64
M ++ P H+ +++DGN RWA G A + +E + ++GI ++++ S
Sbjct: 22 MPATVPHHVAMMIDGNRRWARQLGYDSAAHGHRAGAAKMHEFLRWCDDLGIGVVSLYLLS 81
Query: 65 INNW-RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
+N +R E+++L+++I ++ SL+ + +V+ +G L ++ VL E ++
Sbjct: 82 NDNLVKRDSRELNDLLEIIAELARE--LSLEPD-WRVQHVGRAEGLPTELADVLHEVTER 138
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDV 179
TR +TGL++ +A Y R EI A+++I ++ ++ +SL I ++L T
Sbjct: 139 TRSHTGLHVNLAVGYGGRSEIVDAVRSIIAKHDASGGSLEELAASLTPEQIGEHLYTGGQ 198
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DPDL+IRT GE+RLSDFLLWQ A+SEF F+ PD F A+ ++ RDRRFG
Sbjct: 199 ADPDLVIRTSGEQRLSDFLLWQSAHSEFYFVEALGPDLREVDFLRAIRDFSARDRRFG 256
>gi|45190609|ref|NP_984863.1| AER003Cp [Ashbya gossypii ATCC 10895]
gi|44983588|gb|AAS52687.1| AER003Cp [Ashbya gossypii ATCC 10895]
Length = 274
Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 112/219 (51%), Gaps = 14/219 (6%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S P H+G IMDGN R+A + GH G N+++ E G+ T+FAFS++
Sbjct: 28 SGRVPKHVGFIMDGNRRYAKKHNIEVREGHSAGFMSMNKVLELCYESGVTTATVFAFSVD 87
Query: 67 NWRRPVSEISELVKLIK----SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
N+RR E+ L++L K + G + ++ I VR+IG+R L D+ + AE
Sbjct: 88 NFRRSAFEVDSLMELAKERVMQITQHGELA-EQYGIHVRIIGDRSLLPADVQEEMARAEK 146
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIES--GSVCSHDVDSSLIAKYLDTSDVP 180
T NT L + Y++R EI A+K D +S + D+D+ ++ T +P
Sbjct: 147 ATEANTRAVLNVCIPYTARGEILHAMKGTIADAQSDGAPITEADLDA-----HMYTGGLP 201
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFV--FIPEYWPDF 217
DL+IRT G RLSDFLLWQV V + WPDF
Sbjct: 202 PLDLLIRTSGVSRLSDFLLWQVCQKGVVIELLSCLWPDF 240
>gi|115473277|ref|NP_001060237.1| Os07g0607700 [Oryza sativa Japonica Group]
gi|50508667|dbj|BAD31153.1| putative cis-prenyltransferase [Oryza sativa Japonica Group]
gi|50509860|dbj|BAD32032.1| putative cis-prenyltransferase [Oryza sativa Japonica Group]
gi|113611773|dbj|BAF22151.1| Os07g0607700 [Oryza sativa Japonica Group]
gi|215697311|dbj|BAG91305.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 299
Score = 124 bits (312), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 127/244 (52%), Gaps = 15/244 (6%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ +++S P P HI IMDGN R+A R + +GHR G + E+G+K +T+
Sbjct: 39 IVAVLSYGPMPKHIAFIMDGNRRYAKFRSIQEGSGHRMGFSALIASLLYCYEMGVKYITV 98
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI+N++R ++E+ L++L++ + + + + K N K+ G L + +
Sbjct: 99 YAFSIDNFKRDLTEVKSLMELMEEKINELLENRNVINKVNCKINFWGKLDMLSEPVRVAA 158
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAI-------KNIFQDIESGSVCSHDVDSSLI 170
++ T N GL + Y+S EI A+ ++I Q + SV ++ V S +
Sbjct: 159 EKLMVSTAENKGLVFSVCMPYNSTSEIVIAVNKVCAERRDILQREDVDSVANNGVHSDIS 218
Query: 171 AKYLD----TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHAL 226
LD ++ PDPD++IRT GE RLS+FLLWQ +S WP+FS + A+
Sbjct: 219 VADLDHHMYSAGCPDPDIVIRTSGETRLSNFLLWQTTFSHLQNPDPLWPEFSFKHLVWAI 278
Query: 227 NQYN 230
QY
Sbjct: 279 LQYQ 282
>gi|20336659|gb|AAM19345.1|AF499435_1 hypothetical protein [Arabidopsis thaliana]
Length = 295
Score = 124 bits (312), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 122/242 (50%), Gaps = 26/242 (10%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IMDGN R+A GL +GH+ G ++ E+GIK +TI+AFSI+N+RR
Sbjct: 40 PCHIAFIMDGNRRYAKKCGLLDGSGHKAGFSALMSMLQYCYELGIKYVTIYAFSIDNFRR 99
Query: 71 PVSEISELVKL----IKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
E ++ L IKS L+K + + I+V IGN L+D + ++ T
Sbjct: 100 KPEEXESVMDLMLEKIKSLLEKESI-VHQYGIRVYFIGNLALLNDQVRAAAEKVMKATAK 158
Query: 127 NTGLNLFIAFNYSSRDEISRAIK----NIFQDIESGSVCSHDVDSSL------------- 169
N+ + L I Y+S DEI +A+K N +IE+ + D DS +
Sbjct: 159 NSRVVLLICIAYNSTDEIVQAVKKSCINKSDNIEASNYKHEDSDSDIEGTDMENQEKKIQ 218
Query: 170 ---IAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS-RELFFHA 225
I + + S P+PD++IR+ GE RLS+FLLWQ ++ WP+ R L +
Sbjct: 219 LVDIEENMQMSVAPNPDILIRSSGETRLSNFLLWQTGNTQLCSPAALWPEIGLRHLLWAI 278
Query: 226 LN 227
LN
Sbjct: 279 LN 280
>gi|218199994|gb|EEC82421.1| hypothetical protein OsI_26813 [Oryza sativa Indica Group]
Length = 299
Score = 124 bits (312), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 126/244 (51%), Gaps = 15/244 (6%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ +++S P P HI IMDGN R+A R + +GHR G + E+G+K +T+
Sbjct: 39 IVAVLSYGPMPKHIAFIMDGNRRYAKFRSIQEGSGHRMGFSALIASLLYCYEMGVKYITV 98
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI+N++R +E+ L++L++ + + + + K N K+ G L + +
Sbjct: 99 YAFSIDNFKRDPTEVKSLMELMEEKINELLENRNVINKVNCKINFWGKLDMLSEPVRVAA 158
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAI-------KNIFQDIESGSVCSHDVDSSLI 170
++ T N GL + Y+S EI A+ ++I Q + SV ++ V S +
Sbjct: 159 EKLMASTAENKGLVFSVCMPYNSTSEIVIAVNKVCAERRDILQREDVDSVANYGVHSDIS 218
Query: 171 AKYLD----TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHAL 226
LD ++ PDPD++IRT GE RLS+FLLWQ +S WP+FS + A+
Sbjct: 219 VADLDHHMYSAGCPDPDIVIRTSGETRLSNFLLWQTTFSHLQNPDPLWPEFSFKHLVWAI 278
Query: 227 NQYN 230
QY
Sbjct: 279 LQYQ 282
>gi|125601027|gb|EAZ40603.1| hypothetical protein OsJ_25064 [Oryza sativa Japonica Group]
Length = 335
Score = 124 bits (312), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 127/244 (52%), Gaps = 15/244 (6%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ +++S P P HI IMDGN R+A R + +GHR G + E+G+K +T+
Sbjct: 75 IVAVLSYGPMPKHIAFIMDGNRRYAKFRSIQEGSGHRMGFSALIASLLYCYEMGVKYITV 134
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI+N++R ++E+ L++L++ + + + + K N K+ G L + +
Sbjct: 135 YAFSIDNFKRDLTEVKSLMELMEEKINELLENRNVINKVNCKINFWGKLDMLSEPVRVAA 194
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAI-------KNIFQDIESGSVCSHDVDSSLI 170
++ T N GL + Y+S EI A+ ++I Q + SV ++ V S +
Sbjct: 195 EKLMVSTAENKGLVFSVCMPYNSTSEIVIAVNKVCAERRDILQREDVDSVANNGVHSDIS 254
Query: 171 AKYLD----TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHAL 226
LD ++ PDPD++IRT GE RLS+FLLWQ +S WP+FS + A+
Sbjct: 255 VADLDHHMYSAGCPDPDIVIRTSGETRLSNFLLWQTTFSHLQNPDPLWPEFSFKHLVWAI 314
Query: 227 NQYN 230
QY
Sbjct: 315 LQYQ 318
>gi|294882917|ref|XP_002769885.1| Dehydrodolichyl diphosphate synthase, putative [Perkinsus marinus
ATCC 50983]
gi|239873698|gb|EER02603.1| Dehydrodolichyl diphosphate synthase, putative [Perkinsus marinus
ATCC 50983]
Length = 409
Score = 124 bits (312), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 127/234 (54%), Gaps = 21/234 (8%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IMDGN R+A + LP+ GHR G E +++ +G+K ++ + FS++N+ R
Sbjct: 169 PNHVAFIMDGNRRYATSHHLPKVQGHRYGYEKLLQVLKWCLHLGVKYVSAYTFSVDNFNR 228
Query: 71 PVSEISELVKLIKS-FLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR-- 125
E++ L+ L S F++ G ++ L+++ I V+ G+ L DI + E++TR
Sbjct: 229 SREEVTYLMDLASSKFVELGKHNGFLEQHGICVKFWGDLSLLPTDIHQKCIQLEEKTRKY 288
Query: 126 -LNTGLNLFIAFNYSSRDEISRAIKNIF-------QDIESGSVCSHDVDSSLIAKYLDTS 177
LNL F+YSS+ EIS+A+ Q + + D++S L ++
Sbjct: 289 PARATLNLL--FSYSSKLEISQAVDKAIEKKRAEQQQSQGTPLAWSDIESQLY-----SA 341
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFV-FIPEYWPDFSRELFFHALNQYN 230
P PDLI+RT GE RLSDFLLWQ++ + F+ WPD + F L +Y+
Sbjct: 342 GTPPPDLILRTSGETRLSDFLLWQISPETLICFVKPNWPDMTLLDFARCLMKYD 395
>gi|289675262|ref|ZP_06496152.1| undecaprenyl pyrophosphate synthetase [Pseudomonas syringae pv.
syringae FF5]
Length = 174
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 100/165 (60%)
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L + L++ L +N I +R+IG+R ++ ++EAE +T N+ L IA N
Sbjct: 3 LMELFFTALRRETKRLNENEISLRIIGDRSRFHPELQAAMREAEVRTSGNSRFVLQIAAN 62
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y + +I++A + + +++++G + D+ L+ L T D+P PDL IRTGGE R+S+F
Sbjct: 63 YGGQWDIAQAAQRLAREVQAGHLQPEDITPQLLQTCLATGDLPLPDLCIRTGGEHRISNF 122
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
LLWQ+AY+E F +WPDF + AL + R RRFG S++
Sbjct: 123 LLWQLAYAELYFSDLFWPDFKHDAMRAALADFASRQRRFGKTSEQ 167
>gi|160286196|pdb|2VFW|A Chain A, Rv1086 Native
gi|160286197|pdb|2VFW|B Chain B, Rv1086 Native
gi|160286201|pdb|2VG0|A Chain A, Rv1086 Citronelly Pyrophosphate Complex
gi|160286202|pdb|2VG0|B Chain B, Rv1086 Citronelly Pyrophosphate Complex
Length = 227
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 120/227 (52%), Gaps = 7/227 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI ++ DGN RWA + G + G+R G E++ E GI+ T++ S N +
Sbjct: 3 PRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWCHEAGIELATVYLLSTENLQ 62
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E++ L+++I +++ N+ VR +G+ + ++ L+ A + T
Sbjct: 63 RDPDELAALIEIITDVVEE--ICAPANHWSVRTVGDLGLIGEEPARRLRGAVESTPEVAS 120
Query: 130 LNLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDSSL---IAKYLDTSDVPDPDLI 185
++ +A Y R EI A++ + +++ +G+ VD+ I++ L TS PDPDL+
Sbjct: 121 FHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVDAVTVEGISENLYTSGQPDPDLV 180
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLR 232
IRT GE+RLS FLLWQ AYSE F +WP F F AL Y+ R
Sbjct: 181 IRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDFLRALRDYSAR 227
>gi|160286204|pdb|2VG1|A Chain A, Rv1086 E,E-Farnesyl Diphosphate Complex
gi|160286205|pdb|2VG1|B Chain B, Rv1086 E,E-Farnesyl Diphosphate Complex
Length = 228
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 121/230 (52%), Gaps = 7/230 (3%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S P HI ++ DGN RWA + G + G+R G E++ E GI+ T++ S
Sbjct: 1 SDLPRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWCHEAGIELATVYLLSTE 60
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
N +R E++ L+++I +++ N+ VR +G+ + ++ L+ A + T
Sbjct: 61 NLQRDPDELAALIEIITDVVEE--ICAPANHWSVRTVGDLGLIGEEPARRLRGAVESTPE 118
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDSSL---IAKYLDTSDVPDP 182
++ +A Y R EI A++ + +++ +G+ VD+ I++ L TS PDP
Sbjct: 119 VASFHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVDAVTVEGISENLYTSGQPDP 178
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLR 232
DL+IRT GE+RLS FLLWQ AYSE F +WP F F AL Y+ R
Sbjct: 179 DLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDFLRALRDYSAR 228
>gi|331218399|ref|XP_003321877.1| undecaprenyl pyrophosphate synthetase [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|309300867|gb|EFP77458.1| undecaprenyl pyrophosphate synthetase [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 325
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/206 (37%), Positives = 116/206 (56%), Gaps = 5/206 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+G IMDGN R++ + GLP GHR G E I+ + + N+T++AF+I N++R
Sbjct: 42 PNHVGFIMDGNRRFSRSVGLPVEDGHRAGFEALKRILELLLRLEVPNVTVYAFAIGNFKR 101
Query: 71 PVSEISELVKLIKSFL----KKGFYSL-KKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
E+++L+ L ++ L +KGF L + I+V VIG + L DI + + E+ T
Sbjct: 102 SAEEVNKLMDLARTKLVQICEKGFRQLLDRYGIRVVVIGRKDLLPPDIKESVCKVEEMTI 161
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N L +AF YSS++E++ AI QD S + +D I K L TS P D++
Sbjct: 162 NNKRGCLNVAFPYSSQEEMASAIYKTAQDSISDQTPTSLIDIDTIDKNLYTSHSPPLDIL 221
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIP 211
IRT G RLSDFLLWQ + + P
Sbjct: 222 IRTSGVSRLSDFLLWQTTLNSSEYEP 247
>gi|56206245|emb|CAI21497.1| dehydrodolichyl diphosphate synthase [Homo sapiens]
Length = 222
Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 116/207 (56%), Gaps = 7/207 (3%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A+++ + P P HI IMDGN R+A + R GH +G E + +GI +T+
Sbjct: 16 CANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R SE+ L+ L + S L + L+K+ + +RV+G+ L D+ ++
Sbjct: 76 YAFSIENFKRSKSEVDGLMDLARQKFSRLMEEKEKLQKHGVCIRVLGDLHLLPLDLQELI 135
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSV---CSHDVDSSLIAKYL 174
+A T+ L + F Y+SR EIS A++ + +E G + D+ SL+ K L
Sbjct: 136 AQAVQATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPRYPDDISESLLDKCL 195
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQ 201
T+ P PD++IRT GE RLSDFLLWQ
Sbjct: 196 YTNRSPHPDILIRTSGEVRLSDFLLWQ 222
>gi|91772122|ref|YP_564814.1| undecaprenyl pyrophosphate synthetase [Methanococcoides burtonii
DSM 6242]
gi|91711137|gb|ABE51064.1| undecaprenyl diphosphate synthase [Methanococcoides burtonii DSM
6242]
Length = 283
Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 128/240 (53%), Gaps = 9/240 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ASM + P+HI IIMDGN R+A G GH +G ++ ++ + E+G+K LT+
Sbjct: 16 LLASMKGKAVPEHIAIIMDGNRRFAGKLGKRVDYGHSRGADITERVIEWSYEIGVKELTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIKS---FLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFS N+ R E L +LI + +++K + ++ I+VR +G+ L ++
Sbjct: 76 YAFSTENFNRTDDETVRLFELIANKFDYMRKNERTHER-EIRVRAVGDIGLLSKELQEAT 134
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYL--- 174
+ E+ T+ L +A Y R +I +A+K + + + D+ + +A++L
Sbjct: 135 RRIEEATKDYRKFKLNVAIAYGGRQDIVQAVKKMADKVLINELMPEDISENTVAEHLYPI 194
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFV--FIPEYWPDFSRELFFHALNQYNLR 232
++ V + DLIIRTGG +R+S+FL WQ +E F +WP+F + ++ Y R
Sbjct: 195 ESPSVSNVDLIIRTGGNERISNFLPWQANGNECAAYFCAPFWPEFRKIDLLRSIRIYQTR 254
>gi|284166508|ref|YP_003404787.1| undecaprenyl diphosphate synthase [Haloterrigena turkmenica DSM
5511]
gi|284016163|gb|ADB62114.1| undecaprenyl diphosphate synthase [Haloterrigena turkmenica DSM
5511]
Length = 318
Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 115/229 (50%), Gaps = 4/229 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P H+ +I DGN R+A +G GHR+G + ++ ++G++ LT++ FS N
Sbjct: 22 SGAPTHVAVIQDGNRRYARRKGDDAPEGHREGAQTTERVLEWCQDIGVEELTLYTFSTEN 81
Query: 68 WRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
+ RP E +L L++ L + + N +++R +G+ L + + + AE +TR
Sbjct: 82 FDRPDEENEQLFDLLERKLHEFGDADRVHDNGVRIRALGDVDRLPERVREAVDYAERRTR 141
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
L IA Y R ++ A + + D+E+ + ++D I L V D DLI
Sbjct: 142 GYDQFVLNIALAYGGRSQLLEAARGVATDVENERLEPDEIDVETIEDRLYERPVRDVDLI 201
Query: 186 IRTGGEKRLSDFLLWQVAYSEFV--FIPEYWPDFSRELFFHALNQYNLR 232
IRTGG++R S+FL W +E F YWP+FS+ F + Y R
Sbjct: 202 IRTGGDERTSNFLPWHANGNEAAVFFCTPYWPEFSKTDFLRGIRTYEHR 250
>gi|255030984|ref|ZP_05302935.1| hypothetical protein LmonL_21017 [Listeria monocytogenes LO28]
Length = 177
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 90/147 (61%)
Query: 93 LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIF 152
L + N++V V+G R +L D + +++A T TGL L A NY R EI A K
Sbjct: 31 LIEENVRVNVMGYRENLPDHTMRAVEKAIADTAHCTGLTLNFALNYGGRSEIITAAKEAM 90
Query: 153 QDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPE 212
+++E + D+ + +L +S + DPDL+IRT GE RLS+F+LWQ+AYSEF F
Sbjct: 91 KELELEGKSADDLTEEKLNDHLMSSGLGDPDLLIRTSGELRLSNFMLWQLAYSEFYFTDT 150
Query: 213 YWPDFSRELFFHALNQYNLRDRRFGGL 239
+WPDFS+E F A+ +Y R RRFGGL
Sbjct: 151 HWPDFSKEDFLQAIIEYQNRSRRFGGL 177
>gi|156848547|ref|XP_001647155.1| hypothetical protein Kpol_1036p40 [Vanderwaltozyma polyspora DSM
70294]
gi|156117839|gb|EDO19297.1| hypothetical protein Kpol_1036p40 [Vanderwaltozyma polyspora DSM
70294]
Length = 291
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 119/217 (54%), Gaps = 11/217 (5%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S+ P H+G +MDGN R+A + + GH G ++I+ E G++ T+FAFSI
Sbjct: 28 SNCVPKHVGFVMDGNRRYAKKKDIEIKEGHEAGFLSMSKILELCYESGVEITTVFAFSIE 87
Query: 67 NWRRPVSEISELVKL----IKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
N++R E+ L+KL I+ + G + +K I+VRVIG+ L D+L ++ A +
Sbjct: 88 NFKRSSKEVDHLMKLASDRIRQITEHGDLA-EKYGIRVRVIGDLSLLPTDVLKDIELATE 146
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T+ N L I F Y+ R+EI ++K + SG ++++ L+ L TS +P
Sbjct: 147 ITKNNNRATLNICFPYTGREEIFHSVKTVLSQNLSG----NEINEKLLDSNLYTSGLPPL 202
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFV--FIPEYWPDF 217
DL++RT G RLSDF+LWQV + + WP+F
Sbjct: 203 DLLVRTSGVTRLSDFMLWQVINHDVTIELLDCLWPEF 239
>gi|154151602|ref|YP_001405220.1| undecaprenyl diphosphate synthase [Candidatus Methanoregula boonei
6A8]
gi|154000154|gb|ABS56577.1| undecaprenyl diphosphate synthase [Methanoregula boonei 6A8]
Length = 255
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 118/233 (50%), Gaps = 5/233 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M + P H+ II DGN R+A G+ GHR G + E++ A E+GI+ +TI++FS
Sbjct: 17 MQCTQIPTHVAIIQDGNRRFAKEIGIDTAQGHRAGADKTEEMLDWAHELGIRFVTIYSFS 76
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRV--IGNRLSLDDDILCVLKEAED 122
N+ R EI EL +L K + + K+RV +G+R L +D+ ++ AE+
Sbjct: 77 TENFHRTEEEIRELFRLFKEKFISTISDERVHRYKIRVQMLGDRSLLPEDLRAAVEAAEE 136
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYL-DTSDVPD 181
T+ G L +A Y R+EI A + I + G + +D ++ +L + ++P
Sbjct: 137 ATKDYDGFTLNVALAYGGRNEIVLAAREIVSAVREGKIAPDTIDQKMVESHLHEGKEIPP 196
Query: 182 PDLIIRTGGEKRLSDFLLWQV--AYSEFVFIPEYWPDFSRELFFHALNQYNLR 232
DLIIRTG E R S+FL W S F YWP F + A+ Y+ R
Sbjct: 197 VDLIIRTGNEYRTSNFLPWLANGHESAVYFCAPYWPLFRKIDLLRAIRIYDQR 249
>gi|300710596|ref|YP_003736410.1| undecaprenyl pyrophosphate synthase [Halalkalicoccus jeotgali B3]
gi|299124279|gb|ADJ14618.1| undecaprenyl pyrophosphate synthase [Halalkalicoccus jeotgali B3]
Length = 287
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 116/227 (51%), Gaps = 4/227 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +I DGN R+A +G GHR G + ++ E+GI+ LT++AFS N R
Sbjct: 14 PTHVAVIQDGNRRYARKQGTETSDGHRAGAQTTERVLNWCEELGIEELTLYAFSTENLER 73
Query: 71 PVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
P E + L+ L++ + +++R +GN L + + + AE +TR
Sbjct: 74 PPDEREAIYGLLCEKLREFADADRVHDGGVRIRALGNLSLLPERVQEAARYAERRTREYD 133
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
L IA Y R E+ +++ + +E+ + ++D+ I + L ++ D DLIIRT
Sbjct: 134 TFVLNIALAYGGRAELLGVARDVARAVETSDLRPREIDADEIDRRLYDDELRDVDLIIRT 193
Query: 189 GGEKRLSDFLLWQVAYSEFV--FIPEYWPDFSRELFFHALNQYNLRD 233
GG++R S+FL W +E F YWP+FS+ F A+ Y R+
Sbjct: 194 GGDERTSNFLPWHANGNEAAVFFCAPYWPEFSKVDFLRAVRTYQHRE 240
>gi|309807204|ref|ZP_07701178.1| di-trans,poly-cis-decaprenylcistransferase-like protein
[Lactobacillus iners LactinV 03V1-b]
gi|308166425|gb|EFO68630.1| di-trans,poly-cis-decaprenylcistransferase-like protein
[Lactobacillus iners LactinV 03V1-b]
Length = 140
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 84/127 (66%), Gaps = 3/127 (2%)
Query: 116 VLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD 175
++K+AE +T N G+ L AFNY SR EI+ AI I DI++ + ++ L++ YL
Sbjct: 14 IIKKAEQETADNDGMILNFAFNYGSRQEITAAISKIALDIQNKKIEVDSINEQLVSDYLM 73
Query: 176 TS---DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLR 232
T+ D DPDL+IRT GE+RLS+F+LWQ+AYSEF F YWPDF+ + F + +Y R
Sbjct: 74 TAKFGDYADPDLLIRTSGEERLSNFMLWQLAYSEFYFTKTYWPDFTTDEFKKIVEEYQHR 133
Query: 233 DRRFGGL 239
DRRFG +
Sbjct: 134 DRRFGKI 140
>gi|226327049|ref|ZP_03802567.1| hypothetical protein PROPEN_00910 [Proteus penneri ATCC 35198]
gi|225204267|gb|EEG86621.1| hypothetical protein PROPEN_00910 [Proteus penneri ATCC 35198]
Length = 169
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 95/151 (62%)
Query: 92 SLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNI 151
SL K+N+K+ VIG+ + +K + T NTGLNL IA NY R +I++++K +
Sbjct: 11 SLHKHNVKLTVIGDISRFSRRLQDRIKSSVALTANNTGLNLNIAANYGGRWDITQSVKQL 70
Query: 152 FQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIP 211
+ G + D++ + I+ +L + PD DL+IRTGGE R+S+FL+WQ+AY+E F
Sbjct: 71 ATSLAKGEISLEDINENAISSHLCLHNQPDVDLVIRTGGEHRISNFLIWQIAYAELYFTQ 130
Query: 212 EYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
WPDF ++F +AL+ + R+RRFGG + +
Sbjct: 131 VLWPDFDEQVFQNALDAFAKRERRFGGTTSE 161
>gi|302306512|ref|NP_982925.2| ABL022Wp [Ashbya gossypii ATCC 10895]
gi|299788551|gb|AAS50749.2| ABL022Wp [Ashbya gossypii ATCC 10895]
Length = 401
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 121/230 (52%), Gaps = 21/230 (9%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IMDGN R+A + LP GH G + GI+ ++ +AFSI N+ R
Sbjct: 125 PQHVSFIMDGNRRYAKSMNLPLKLGHEAGSVALMRTLHTCKRAGIEAVSAYAFSIENFNR 184
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRL-----------SLDDDILCVLKE 119
P EI L +++ L+ ++ + N+K R+ G RL L+D I +
Sbjct: 185 PKEEIDTLTEMLSRRLQD--FANRATNLKDRMYGARLLVVGDRALLSPELNDKITYI--- 239
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLI--AKYLDTS 177
ED T+ NT ++I Y++R++I A+ ++ + ++G++ S D+ + ++ A YL +
Sbjct: 240 -EDMTKHNTAFTVYICLPYTTRNDIYHAMFDLVRLCQAGALDSKDISTEMLTNAMYLG-A 297
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFV-FIPEYWPDFSRELFFHAL 226
+ D+++RT G RLSD++LWQV ++ F WPDF+ FF L
Sbjct: 298 NSNRADILVRTSGHTRLSDYMLWQVHEQSYIEFSNCMWPDFTFRTFFTIL 347
>gi|189502956|gb|ACE06859.1| unknown [Schistosoma japonicum]
gi|226468238|emb|CAX69796.1| hypothetical protein [Schistosoma japonicum]
Length = 326
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 124/226 (54%), Gaps = 5/226 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IMDGN R+A ++ L + GH G ++ + +VG++ ++IF FSI+N+ R
Sbjct: 27 PKHVAFIMDGNRRFADSKMLKQSDGHLYGFSKLSDTLQWCRDVGVEEVSIFTFSIDNFNR 86
Query: 71 PVSEISELVKLIKSFLKK---GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
E+S L+ L + L++ LK ++I +RVIG+ L I + + TR +
Sbjct: 87 SPEEVSFLMNLAEEKLQELLDNIEELKADDICIRVIGSLGLLPTKIQSLAAQLMLVTRNH 146
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+ L I Y+SR++I+ A++ + ++ G + D+ L++K L T DL+IR
Sbjct: 147 SRSILNICMAYNSRNDITNAMETVRLGVKEGKIIPSDITRELLSKCLYTRLSKPLDLLIR 206
Query: 188 TGGEKRLSDFLLWQVAY--SEFVFIPEYWPDFSRELFFHALNQYNL 231
T GE RLSDFL WQ + + + FI YWP+FS F ++ Y +
Sbjct: 207 TSGEIRLSDFLTWQASENGTIYKFIGNYWPEFSWWDFLSSIFHYQM 252
>gi|226468240|emb|CAX69797.1| hypothetical protein [Schistosoma japonicum]
Length = 323
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 124/226 (54%), Gaps = 5/226 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IMDGN R+A ++ L + GH G ++ + +VG++ ++IF FSI+N+ R
Sbjct: 27 PKHVAFIMDGNRRFADSKMLKQSDGHLYGFSKLSDTLQWCRDVGVEEVSIFTFSIDNFNR 86
Query: 71 PVSEISELVKLIKSFLKK---GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
E+S L+ L + L++ LK ++I +RVIG+ L I + + TR +
Sbjct: 87 SPEEVSFLMNLAEEKLQELLDNIEELKADDICIRVIGSLGLLPTKIQSLAAQLMLVTRNH 146
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+ L I Y+SR++I+ A++ + ++ G + D+ L++K L T DL+IR
Sbjct: 147 SRSILNICMAYNSRNDITNAMETVRLGVKEGKIIPSDITRELLSKCLYTRLSKPLDLLIR 206
Query: 188 TGGEKRLSDFLLWQVAY--SEFVFIPEYWPDFSRELFFHALNQYNL 231
T GE RLSDFL WQ + + + FI YWP+FS F ++ Y +
Sbjct: 207 TSGEIRLSDFLTWQASENGTIYKFIGNYWPEFSWWDFLSSIFHYQM 252
>gi|29841377|gb|AAP06409.1| similar to GenBank Accession Number BC003643 RIKEN cDNA 3222401G21
gene in Homo sapiens [Schistosoma japonicum]
Length = 317
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 124/226 (54%), Gaps = 5/226 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IMDGN R+A ++ L + GH G ++ + +VG++ ++IF FSI+N+ R
Sbjct: 18 PKHVAFIMDGNRRFADSKMLKQSDGHLYGFSKLSDTLQWCRDVGVEEVSIFTFSIDNFNR 77
Query: 71 PVSEISELVKLIKSFLKK---GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
E+S L+ L + L++ LK ++I +RVIG+ L I + + TR +
Sbjct: 78 SPEEVSFLMNLAEEKLQELLDNIEELKADDICIRVIGSLGLLPTKIQSLAAQLMLVTRNH 137
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+ L I Y+SR++I+ A++ + ++ G + D+ L++K L T DL+IR
Sbjct: 138 SRSILNICMAYNSRNDITNAMETVRLGVKEGKIIPSDITRELLSKCLYTRLSKPLDLLIR 197
Query: 188 TGGEKRLSDFLLWQVAY--SEFVFIPEYWPDFSRELFFHALNQYNL 231
T GE RLSDFL WQ + + + FI YWP+FS F ++ Y +
Sbjct: 198 TSGEIRLSDFLTWQASENGTIYKFIGNYWPEFSWWDFLSSIFHYQM 243
>gi|255522543|ref|ZP_05389780.1| undecaprenyl diphosphate synthase [Listeria monocytogenes FSL
J1-175]
Length = 152
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 90/147 (61%)
Query: 93 LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIF 152
L + N++V V+G R +L + + +++A T TGL L A NY R EI A K
Sbjct: 6 LIEENVRVNVMGYRENLPNHTMRAVEKAIADTAHCTGLTLNFALNYGGRSEIITAAKEAM 65
Query: 153 QDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPE 212
+++E + D+ + +L +S + DPDL+IRT GE RLS+F+LWQ+AYSEF F
Sbjct: 66 KELELEGKSADDLTEEKLNDHLMSSGLGDPDLLIRTSGELRLSNFMLWQLAYSEFYFTDT 125
Query: 213 YWPDFSRELFFHALNQYNLRDRRFGGL 239
+WPDFS+E F A+ +Y R RRFGGL
Sbjct: 126 HWPDFSKEDFLQAIIEYQNRSRRFGGL 152
>gi|73920261|sp|Q5V1I1|UPPS_HALMA RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
Length = 304
Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 117/230 (50%), Gaps = 4/230 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S PDH+ +IMDGN R+A +G + GH++G + ++ E+GI+ +T++ FS N
Sbjct: 22 SGTPDHVAVIMDGNRRYAEKQGTKKQEGHKEGAQTTEALLNWCDELGIREVTLYTFSTEN 81
Query: 68 WRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
+ R E + L++ L+ + + + +R IG L + + + AE +T
Sbjct: 82 FDRDPEEREHIFDLVEQKLRTFADADRVHEAGVCIRAIGETEMLPERVRDAIDYAEGRTA 141
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
LNL IA Y R E+ A +++ +E+ ++ DV + I + L D DLI
Sbjct: 142 QYDQLNLNIALAYGGRAELLGAARDVAAAVENETLDPTDVSAETIEERLYEGPTRDVDLI 201
Query: 186 IRTGGEKRLSDFLLWQVAYSEFV--FIPEYWPDFSRELFFHALNQYNLRD 233
+RTGG++R S+FL W +E F YWP+F + F A+ Y R+
Sbjct: 202 VRTGGDERTSNFLPWHANGNEAATFFCTPYWPEFRKVDFLRAIRTYQNRE 251
>gi|55378477|ref|YP_136327.1| undecaprenyl pyrophosphate synthetase [Haloarcula marismortui ATCC
43049]
gi|55231202|gb|AAV46621.1| undecaprenyl pyrophosphate synthetase [Haloarcula marismortui ATCC
43049]
Length = 308
Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 117/230 (50%), Gaps = 4/230 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S PDH+ +IMDGN R+A +G + GH++G + ++ E+GI+ +T++ FS N
Sbjct: 26 SGTPDHVAVIMDGNRRYAEKQGTKKQEGHKEGAQTTEALLNWCDELGIREVTLYTFSTEN 85
Query: 68 WRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
+ R E + L++ L+ + + + +R IG L + + + AE +T
Sbjct: 86 FDRDPEEREHIFDLVEQKLRTFADADRVHEAGVCIRAIGETEMLPERVRDAIDYAEGRTA 145
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
LNL IA Y R E+ A +++ +E+ ++ DV + I + L D DLI
Sbjct: 146 QYDQLNLNIALAYGGRAELLGAARDVAAAVENETLDPTDVSAETIEERLYEGPTRDVDLI 205
Query: 186 IRTGGEKRLSDFLLWQVAYSEFV--FIPEYWPDFSRELFFHALNQYNLRD 233
+RTGG++R S+FL W +E F YWP+F + F A+ Y R+
Sbjct: 206 VRTGGDERTSNFLPWHANGNEAATFFCTPYWPEFRKVDFLRAIRTYQNRE 255
>gi|68066222|ref|XP_675094.1| dehydrodolichyl diphosphate synthetase [Plasmodium berghei strain
ANKA]
gi|56494076|emb|CAI00192.1| dehydrodolichyl diphosphate synthetase, putative [Plasmodium
berghei]
Length = 317
Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 131/267 (49%), Gaps = 50/267 (18%)
Query: 15 GIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSE 74
IIMDGN R+A GL GH G + I+ ++ IK L++FAFS+ N+ R E
Sbjct: 38 SIIMDGNRRFAKQMGLHTSIGHYLGSKNLIHIIEICIQLNIKILSVFAFSLLNYNRSPEE 97
Query: 75 ISELVKLIKSFLKKGFYSL---KKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
I L L FL Y L K+N I++R+IGN +++ ++ E++T+ + L
Sbjct: 98 IHILFYLNLFFLINEEYFLKFVKQNKIRIRIIGNLSYINEAYREIIHNTEEKTKHHDNLI 157
Query: 132 LFIAFNYSSRDE----------------------------------------ISRAIKN- 150
L I F+Y+SR+E I+ IKN
Sbjct: 158 LNIFFSYTSRNEMNLCKINPNLYFDSYKDLLKKRNINYACANSNNSDKKNIQINPKIKNT 217
Query: 151 -IFQ-DIESGSVCSHDVDSSLIAKY---LDTSDVPDPDLIIRTGGEKRLSDFLLWQVA-Y 204
I Q G VCS D + I Y L TSD+P PD++IRT GE+RLSDFLL+Q++ +
Sbjct: 218 QISQVQCNCGKVCSLDENQIKILNYHNKLLTSDIPPPDILIRTSGEQRLSDFLLYQISEF 277
Query: 205 SEFVFIPEYWPDFSRELFFHALNQYNL 231
+E FI +YWP F+ F + + Y +
Sbjct: 278 TEIYFIDDYWPLFNFLKFTYVILHYTI 304
>gi|254565945|ref|XP_002490083.1| Cis-prenyltransferase involved in synthesis of long-chain dolichols
[Pichia pastoris GS115]
gi|238029879|emb|CAY67802.1| Cis-prenyltransferase involved in synthesis of long-chain dolichols
[Pichia pastoris GS115]
Length = 279
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 120/213 (56%), Gaps = 6/213 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI ++MDGN R+A G+ +GH G + +++ VG+K +TI+AFSI N+ R
Sbjct: 37 PQHIALVMDGNRRYAKVNGIQLRSGHDAGADALVDVLGCCYRVGVKAVTIYAFSIENFNR 96
Query: 71 PVSEISELVKLIKSFL---KKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
+EI+ L++L+K L + ++ N+++ ++GN+ + D+ L + E+ TR +
Sbjct: 97 SQAEINTLLELLKQKLLYLSDTSHYAERYNVRINIVGNKDMIPDEFRSDLDKVEELTRYH 156
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T L + F ++SRD+I+ +I N+ + S + D++ ++ + P D++IR
Sbjct: 157 TKRTLNVCFPFTSRDDITSSIANVANRVLSKELAVADINLQQVSNSVIDRTSPPLDILIR 216
Query: 188 TGGEKRLSDFLLWQVAY---SEFVFIPEYWPDF 217
T G RLSDFL WQ++ S VF WP+F
Sbjct: 217 TSGHTRLSDFLTWQLSQNPTSTVVFTNTLWPNF 249
>gi|193716231|ref|XP_001949834.1| PREDICTED: dehydrodolichyl diphosphate synthase-like [Acyrthosiphon
pisum]
Length = 306
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 120/226 (53%), Gaps = 3/226 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IMDG+ + + + KG + E + +GIK +T++AFS++N++R
Sbjct: 51 PKHVAFIMDGS--YGEKNCISAQESYAKGFDKLVETLQWCLHLGIKEVTVYAFSLHNFKR 108
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
EI L + +K+FL++ L + + + GN L DD++ + ++ T+ N +
Sbjct: 109 TREEIDALFEEVKTFLEER-DRLNELGVCINFFGNIKKLPDDLVKLFAKSMLITKQNNKI 167
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L +AF+Y+ DE++ A K I I++ ++ D+ ++ + T P PDL+IRT G
Sbjct: 168 SLNVAFSYTGHDELTNAFKQISHGIKNNNLEESDLSVEILDSCMYTYPSPPPDLLIRTSG 227
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
E RLSDF+LWQ +YS F W + + F A+ Y R F
Sbjct: 228 ETRLSDFMLWQCSYSYIYFTSVLWSELTAWDFMIAIFMYQRNVRAF 273
>gi|294462538|gb|ADE76815.1| unknown [Picea sitchensis]
Length = 318
Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 131/243 (53%), Gaps = 29/243 (11%)
Query: 5 MMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++++ P P H+ IIMDGN R+AA R + + +GH+ G + + ++GIK ++++AF
Sbjct: 43 IITAGPIPKHVAIIMDGNRRYAARRQMEKTSGHQFGYDSLMHTLRDCFDLGIKCVSVYAF 102
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEA 120
SI N++R E++ L+ L++ L+ + + I+V+V+G L + + ++A
Sbjct: 103 SIENFKRSKEEVATLMNLMQEKLEALIEKESMVTEYGIRVQVLGELSLLPESVRRAAEKA 162
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNI-------------------FQDIESGSVC 161
+R N L I Y+S EI +A++N+ QD + GS+
Sbjct: 163 MAMSRGNEKAVLNIFAPYTSTQEIVKAVENVRHEVLTRKIEVHEKIHGFHSQDDDDGSIT 222
Query: 162 S--HDVDSSL----IAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWP 215
H + SS+ I ++L T+D +P L+IRT GE RLS+FLLWQ +++ P WP
Sbjct: 223 EEIHGLQSSVTEDEIERHLYTADCGEPQLLIRTSGEIRLSNFLLWQSSFTFLYVTPVLWP 282
Query: 216 DFS 218
+FS
Sbjct: 283 EFS 285
>gi|282164487|ref|YP_003356872.1| undecaprenyl pyrophosphate synthetase [Methanocella paludicola
SANAE]
gi|282156801|dbj|BAI61889.1| undecaprenyl pyrophosphate synthetase [Methanocella paludicola
SANAE]
Length = 325
Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 123/237 (51%), Gaps = 8/237 (3%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
++ S P H+ II DGN R+A G GH G + +++ E+GI+ LT++AFS
Sbjct: 33 VLRHSIPQHVAIIQDGNRRYAKRLGKSVEQGHIYGADTTEKVLDWCGELGIRQLTLYAFS 92
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRV--IGNRLSLDDDILCVLKEAED 122
N++RP E L L K F ++ S + + K+R+ +G+ L D+ + E
Sbjct: 93 TENFKRPEQEKKALFDLFKHFARQARESKRTHESKLRIRSVGDISMLPQDVKDEIALTEA 152
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYL--DTSDVP 180
T L +A Y R EI + + ++++SGS+ ++ ++ KYL +
Sbjct: 153 ATATYDKFYLNVAVAYGGRQEIVDGARKMAKEVKSGSLEPENITEEMVDKYLYFGSETRS 212
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSE---FVFIPEYWPDFSRELFFHALNQYNLRDR 234
DLIIRTGG++R S+FL WQ + +E ++ P +WP+F + F A+ Y R++
Sbjct: 213 QVDLIIRTGGDERTSNFLPWQASGNECAIYIAAP-FWPEFRKIDFIRAVRAYQSREK 268
>gi|328350485|emb|CCA36885.1| cis-prenyltransferase, dehydrodolichyl diphosphate synthase [Pichia
pastoris CBS 7435]
Length = 276
Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 126/223 (56%), Gaps = 7/223 (3%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ +++ + P P HI ++MDGN R+A G+ +GH G + +++ VG+K +TI
Sbjct: 24 IINVVKTGPVPQHIALVMDGNRRYAKVNGIQLRSGHDAGADALVDVLGCCYRVGVKAVTI 83
Query: 61 FAFSINNWRRPVSEISELVKLIKSFL---KKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N+ R +EI+ L++L+K L + ++ N+++ ++GN+ + D+ L
Sbjct: 84 YAFSIENFNRSQAEINTLLELLKQKLLYLSDTSHYAERYNVRINIVGNKDMIPDEFRSDL 143
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+ E+ TR +T L + F ++SRD+I+ +I N+ + S + D++ ++ +
Sbjct: 144 DKVEELTRYHTKRTLNVCFPFTSRDDITSSIANVANRVLSKELAVADINLQQVSNSVIDR 203
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAY---SEFVFIPEYWPDF 217
P D++IRT G RLSDFL WQ++ S VF WP+F
Sbjct: 204 TSPPLDILIRTSGHTRLSDFLTWQLSQNPTSTVVFTNTLWPNF 246
>gi|169860188|ref|XP_001836730.1| dehydrodolichyl diphosphate synthetase [Coprinopsis cinerea
okayama7#130]
gi|116502247|gb|EAU85142.1| dehydrodolichyl diphosphate synthetase [Coprinopsis cinerea
okayama7#130]
Length = 261
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 124/237 (52%), Gaps = 10/237 (4%)
Query: 1 MVASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
++ ++++ P P H+ +MDGN R+A GH +G ++ +G+ +T
Sbjct: 16 IIIKILAAGPVPKHVAFVMDGNRRYARKHQKEIPQGHSEGFVALKRVLEVCLYLGVSCVT 75
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCV 116
++AF+I+N++R E+ L+ L ++ L + L K +++ V+G + L + +
Sbjct: 76 VYAFAIDNFKRSPEEVDALMHLAETKLVELCEHGDLLDKYGVRLNVLGRKELLPEPVRAA 135
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGS--VCSHDVDSSLIAKYL 174
+ +AED TR N L + Y SRDEI+ A+++ Q+ G V D++S+L+
Sbjct: 136 IAKAEDMTRNNKRAILNVCMPYGSRDEITTAVQSSVQNAMEGDCVVTEEDIESNLMTTL- 194
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFFHALNQYN 230
+ P D++IRT G KRLSDFLLWQ ++ F +WPDF+ F L Y
Sbjct: 195 --GNSPPLDILIRTSGVKRLSDFLLWQCCEDTQIHFTDTFWPDFALTDFIPILLDYQ 249
>gi|21222267|ref|NP_628046.1| undecaprenyl pyrophosphate synthase [Streptomyces coelicolor A3(2)]
gi|42560021|sp|Q9XA06|UPPS2_STRCO RecName: Full=Undecaprenyl pyrophosphate synthase 2; Short=UPP
synthase 2; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase 2;
AltName: Full=Undecaprenyl diphosphate synthase 2;
Short=UDS 2
gi|5102810|emb|CAB45225.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)]
Length = 258
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 124/247 (50%), Gaps = 16/247 (6%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGL--PRCAGHRKGIEVFNEIVAAAAEVGIKNL 58
+V + P HIGI++DGN RWA G+ PR G+R G + + I+++
Sbjct: 17 LVRELEGRPRPQHIGIMLDGNRRWAKMSGIDDPR-EGYRAGGAKVLDFLRWCDSAQIEHV 75
Query: 59 TIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
T+F S +N RP +++ L+ +I +++ + N V +G L + LK
Sbjct: 76 TLFMLSDDNLARPEEQLNPLIDIIAEVVEQ--LAAPGNPWPVEAVGALDLLPAESASRLK 133
Query: 119 EAEDQTR-LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL-------I 170
A T+ G + +A Y R EI A+++ + S D+D + I
Sbjct: 134 TATAATQGRKGGTKVDVAVGYGGRREIVDAVRSALTEHSS---QGGDIDEFIETFTMEHI 190
Query: 171 AKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
+K+L + + DLIIRT GE+RLS FLLWQ AY+E F YWPDF F AL Y+
Sbjct: 191 SKHLYSKTRSESDLIIRTSGEQRLSGFLLWQSAYAEVHFCETYWPDFREIDFLRALRSYS 250
Query: 231 LRDRRFG 237
LR+RR+G
Sbjct: 251 LRERRYG 257
>gi|50550943|ref|XP_502945.1| YALI0D17556p [Yarrowia lipolytica]
gi|49648813|emb|CAG81137.1| YALI0D17556p [Yarrowia lipolytica]
Length = 337
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 124/244 (50%), Gaps = 22/244 (9%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+V + + P H+ IMDGN R+A L GH G E+ +++ +GI +TI
Sbjct: 23 LVRVLRTGPVPRHVAFIMDGNRRFAKTNNLELREGHVAGTELLLKLLEVCFRMGINTVTI 82
Query: 61 FAFSINNWRRPVSEISELVKLIKS---FLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N+ RP E L LI++ L ++ + ++++GNR + +DIL ++
Sbjct: 83 YAFSIENFNRPKVETDALFDLIRNNIVVLGSKDEMAERYGLAIKILGNRDLIPEDILELI 142
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSH-------------- 163
E+ T+ N L I F Y+SRD+I++AI+ + D+ + + +
Sbjct: 143 VRVEETTKDNKRGTLNICFPYTSRDDIAQAIQKVVTDVFADTKQAPPPKSFGPPSSTSRP 202
Query: 164 ---DVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYS-EFVFIPEYWPDFS- 218
V ++ K + T + P D++IRT G RLSDF+LWQ + F+ WPDF
Sbjct: 203 SPLHVTEKMLEKAMYTGESPPLDIMIRTSGVTRLSDFMLWQSHKNCTLEFVDTLWPDFGV 262
Query: 219 RELF 222
REL+
Sbjct: 263 RELY 266
>gi|47216331|emb|CAG03368.1| unnamed protein product [Tetraodon nigroviridis]
Length = 283
Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 118/230 (51%), Gaps = 37/230 (16%)
Query: 3 ASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
A+++ + P P H+ IMDGN R+A + + GH +G E + + I+ +T++
Sbjct: 17 ANVLKAGPMPKHVAFIMDGNRRFARKKNMECLKGHMQGFNKLAETLRWCKHLNIQEVTVY 76
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFSI N++R E+ L++L + V+++ R L+
Sbjct: 77 AFSIENFKRTKEEVDGLMELARQKF-------------VKLLEERCFLN----------- 112
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ F+Y+SR EI+ A++ + +E G + + DV SL+ + L +++ P+
Sbjct: 113 ------------VCFSYTSRHEITNAVREMAWGVEEGLLKASDVSESLLNECLYSNNSPN 160
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
PDL+IRT GE RLSDFLLWQ ++S VF WP++S A+ +Y L
Sbjct: 161 PDLLIRTSGEVRLSDFLLWQSSHSCIVFQSVLWPEYSFWNLCEAILRYQL 210
>gi|239943139|ref|ZP_04695076.1| undecaprenyl diphosphate synthase [Streptomyces roseosporus NRRL
15998]
gi|239989597|ref|ZP_04710261.1| undecaprenyl diphosphate synthase [Streptomyces roseosporus NRRL
11379]
Length = 233
Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 113/224 (50%), Gaps = 6/224 (2%)
Query: 14 IGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVS 73
+ +I+DGN RWA G GH G E++ ++G++ +T++ S +N RR +
Sbjct: 1 MALILDGNRRWATVHGRTASEGHEAGFSRVPEVLRWCHDLGVETVTLWLLSTDNLRRDPA 60
Query: 74 EISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLF 133
E+ L+++I + G + + ++ R G R + + +L L E +T NTG+ +
Sbjct: 61 EVDALMRIITDLVN-GLAASDRWRLRHR--GVRAMVPEPLLTALDEVAARTTDNTGMRVN 117
Query: 134 IAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD---TSDVPDPDLIIRTGG 190
+A Y R+E++ A + + + + + + A+ + +D P P+L++RT G
Sbjct: 118 LAICYGGREEVTEACRELLEGYAHEGLSPAEAARRVTAEAVTEAIAADDPAPELVVRTSG 177
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
E+R S FLLW ++E F YWPDF + AL Y R R
Sbjct: 178 EQRSSGFLLWTARHAEHYFTTTYWPDFGYDDLKAALTHYERRSR 221
>gi|302785998|ref|XP_002974771.1| hypothetical protein SELMODRAFT_414870 [Selaginella moellendorffii]
gi|300157666|gb|EFJ24291.1| hypothetical protein SELMODRAFT_414870 [Selaginella moellendorffii]
Length = 155
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/143 (44%), Positives = 91/143 (63%), Gaps = 3/143 (2%)
Query: 98 IKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIES 157
I V IG+ L + + + +++TR N GL L + +YS R ++ +A K + +++
Sbjct: 8 ICVHFIGDLSRLPGTLRLLACQIQERTRHNKGLKLVVGLSYSGRQDLVQACKAVAAEVQR 67
Query: 158 GSVCSHDVDSS-LIAKYLDTSD--VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYW 214
GSV ++D S L +K L T D + DPDL+IRT GEKRLS+F+LWQ+AY+E VF+PE W
Sbjct: 68 GSVDLDEIDESKLESKLLTTWDEEISDPDLLIRTSGEKRLSNFMLWQLAYTELVFVPELW 127
Query: 215 PDFSRELFFHALNQYNLRDRRFG 237
PDF + AL +Y RDRRFG
Sbjct: 128 PDFGENEYRVALAEYQERDRRFG 150
>gi|121729974|ref|ZP_01682392.1| flagellar protein FliG [Vibrio cholerae V52]
gi|121628278|gb|EAX60790.1| flagellar protein FliG [Vibrio cholerae V52]
Length = 167
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 93/154 (60%)
Query: 84 SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDE 143
+ L L KNN+++RVIG++ + + + +AE T NTG+ + IA NY + +
Sbjct: 2 TVLSTEIKKLHKNNLRLRVIGDKSRFSERLQTKIAQAEQLTASNTGMVVNIAANYGGQWD 61
Query: 144 ISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVA 203
I +A + + + + G + D+D ++ ++L +D+PD DL+IRT GE R+S+F+LWQ+A
Sbjct: 62 ILQATQALAEKVTQGELQPSDIDEAVFKQHLTMADLPDVDLLIRTSGECRISNFMLWQLA 121
Query: 204 YSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
Y+E F P +WP+F A+ + R+RRFG
Sbjct: 122 YAEMYFTPVFWPEFDENCLIEAVTWFVNRERRFG 155
>gi|159476400|ref|XP_001696299.1| predicted protein [Chlamydomonas reinhardtii]
gi|158282524|gb|EDP08276.1| predicted protein [Chlamydomonas reinhardtii]
Length = 229
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 117/220 (53%), Gaps = 18/220 (8%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ +MDGN R+A + + + GH G E++ E+G+++++++AFSI+N+RR
Sbjct: 1 PEHVAFVMDGNRRYAERQHVDKATGHTHGYGKMVEVIHWCMELGVRHISVYAFSIDNFRR 60
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNN-------IKVRVIGNRL----SLDDDILCVLKE 119
E++ L++L + ++ L ++N I + ++G+ S+ +++
Sbjct: 61 SPEEVTALMRLAED----KYFELARDNGLAEREGICMHIVGDLTLPPPSVQGAAARLMRN 116
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT-SD 178
R LN + F+Y++ +E A+ + + G + DV + L T D
Sbjct: 117 TAALRRHRATLN--VCFSYTASEESVAAVSELQAAVRQGLLQPGDVTPVALHGALRTRHD 174
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS 218
P DL++RT GE RLSDFLLWQVA++ ++P WPD S
Sbjct: 175 CPPVDLLVRTSGETRLSDFLLWQVAHAHLCYLPTLWPDLS 214
>gi|239944505|ref|ZP_04696442.1| putative undecaprenyl pyrophosphate synthetase [Streptomyces
roseosporus NRRL 15998]
gi|291447970|ref|ZP_06587360.1| undecaprenyl pyrophosphate synthetase 2 [Streptomyces roseosporus
NRRL 15998]
gi|291350917|gb|EFE77821.1| undecaprenyl pyrophosphate synthetase 2 [Streptomyces roseosporus
NRRL 15998]
Length = 261
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 120/234 (51%), Gaps = 11/234 (4%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ A+++ P H+GI++DGN RWA G G+R G + GI+++T
Sbjct: 20 LAATLVGLPRPQHVGIMVDGNRRWARKAGHTDVREGYRAGGAKVTTFLGWCTAAGIEHVT 79
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
+F S +N RP E+ L+++I+ ++ + + + +VR IG+ L VLKE
Sbjct: 80 LFMLSDDNLGRPAEELGPLIEVIEETVRD--ITAEGRDWEVRAIGSLDMLPGSSARVLKE 137
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD-IESGS-----VCSHDVDSSLIAKY 173
A T GL + +A Y R EI A+K+ F++ I +G V +D I+++
Sbjct: 138 ATAATTGRGGLKVDVAVGYGGRREIVDAVKSAFEEHIAAGGDPAELVARFGIDD--ISRH 195
Query: 174 LDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALN 227
L + D IIRT GE+RLS FLLWQ AY+E ++ YWP F F AL
Sbjct: 196 LYSPVADHTDFIIRTSGEQRLSGFLLWQSAYAEMHWVDCYWPAFRHVDFLRALR 249
>gi|147918805|ref|YP_687470.1| putative undecaprenyl pyrophosphate synthetase [uncultured
methanogenic archaeon RC-I]
gi|110622866|emb|CAJ38144.1| putative undecaprenyl pyrophosphate synthetase [uncultured
methanogenic archaeon RC-I]
Length = 318
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 121/241 (50%), Gaps = 8/241 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M ++ P HI IIMDGN R+A G GH G + ++ ++ ++ LT+
Sbjct: 21 MKREILKGPIPQHIAIIMDGNRRYAKRMGEVVEKGHMLGADTTERVIQWCEQLRVRQLTL 80
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRV--IGNRLSLDDDILCVLK 118
++FS N++R E + LIK L+K S + + K+R+ IG+ L DD+ ++
Sbjct: 81 YSFSTENFQRNEREKKAIFNLIKDKLRKSRESPETHKYKIRINCIGDMDMLPDDMREEIR 140
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYL--DT 176
E + T L +A Y R EI I + +++ + ++ I +YL D
Sbjct: 141 ETHNATGKYDNFFLNVALAYGGRKEIVDGAARIAEKVKAREMNPEEITEDTIDQYLYFDK 200
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSE---FVFIPEYWPDFSRELFFHALNQYNLRD 233
DLIIRTGG++R S+FL WQ + +E ++ P YWP+F + F+ A+ Y RD
Sbjct: 201 KQKSSVDLIIRTGGDERTSNFLPWQASGNECAIYISAP-YWPEFRKIDFYRAIRAYQNRD 259
Query: 234 R 234
R
Sbjct: 260 R 260
>gi|215445245|ref|ZP_03431997.1| Short (C15) chain Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T85]
gi|289757172|ref|ZP_06516550.1| short chain Z-Isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T85]
gi|289712736|gb|EFD76748.1| short chain Z-Isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T85]
Length = 263
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 120/238 (50%), Gaps = 18/238 (7%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGI-------EVFNEIVAAAAEVGIKNLTIFAF 63
P HI ++ DGN RW R A H G E++ E GI+ T++
Sbjct: 32 PRHIAVLCDGNRRWER-----RAAYHYVGYGYRDVVRPKIAEMLRWCHEAGIELATVYLL 86
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S N +R E++ L+++I +++ N+ VR +G+ + ++ L+ A +
Sbjct: 87 STENLQRDPDELAALIEIITDVVEE--ICAPANHWSVRTVGDLGLIGEEPARRLRGAVES 144
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDSSL---IAKYLDTSDV 179
T ++ +A Y R EI A++ + +++ +G+ VD+ I++ L TS
Sbjct: 145 TPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVDAVTVEGISENLYTSGQ 204
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDPDL+IRT GE+RLS FLLWQ AYSE F +WP F F AL Y+ R RR+G
Sbjct: 205 PDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDFLRALRDYSARHRRYG 262
>gi|315053979|ref|XP_003176364.1| dehydrodolichyl diphosphate synthase [Arthroderma gypseum CBS
118893]
gi|311338210|gb|EFQ97412.1| dehydrodolichyl diphosphate synthase [Arthroderma gypseum CBS
118893]
Length = 305
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 129/245 (52%), Gaps = 4/245 (1%)
Query: 1 MVASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
++ S++ P P HI II DGN R+A +RG GH G +V N ++ A E G++ +T
Sbjct: 19 LLVSIVQQGPIPRHIAIIADGNRRYAKSRGFSIKKGHTLGADVLNNVLDLAFETGVEFIT 78
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFY-SLKKNNIKVRVIGNRLSLDDDILCVLK 118
+ FSI N++RP +++ +L+ L + ++ K Y S K ++ R +G + I ++K
Sbjct: 79 AYLFSIENFKRPKNQVDDLMGLFEIWILKCLYPSPNKRKLRFRFLGRLELFPNKIRKLMK 138
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
+ ++T G I Y+SRDE++RAI+ ++ + + + ++ +D ++
Sbjct: 139 KLVEKTANCDGATFNICVAYTSRDEMARAIETTVRNHNDSPQSENHITAEILDSNMDINE 198
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEY-WPDFSR-ELFFHALNQYNLRDRRF 236
D++IRT G RLSDFLLWQ + + + WP F +LFF L + R
Sbjct: 199 GSPLDILIRTSGVGRLSDFLLWQCHRDTVIEVLDMQWPAFQYWDLFFVILRWQRKKMARM 258
Query: 237 GGLSK 241
G +K
Sbjct: 259 GFHTK 263
>gi|302786458|ref|XP_002975000.1| hypothetical protein SELMODRAFT_102749 [Selaginella moellendorffii]
gi|300157159|gb|EFJ23785.1| hypothetical protein SELMODRAFT_102749 [Selaginella moellendorffii]
Length = 310
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 124/246 (50%), Gaps = 22/246 (8%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
++ P HI IIMDGN R+A G+ R +GH G + + + ++G++ +T++AFS
Sbjct: 21 LLCGPVPQHIAIIMDGNRRFADRAGIDRKSGHGFGYDSLIQTLELCLDLGVRYVTVYAFS 80
Query: 65 INNWRRPVSEISELVKLIKSFL-----KKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
I+N+ R E+S L++L++ L +G + K I+V V+G+ L +D+
Sbjct: 81 IDNFARSQEEVSALMELMREKLDLLVSNEGLATAK--GIRVCVLGDLTLLPEDVRASANR 138
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD---IESGSVCSHDVDSSL------- 169
A T+ N+ L I Y+S EI A + ++ + S V SS
Sbjct: 139 AMAATKHNSITVLNICVAYTSTQEIVNATREAVKEALGLSSSKVLDSYFLSSFLFTLDSQ 198
Query: 170 -----IAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFH 224
I ++L T+ P PD++IRT GE RLS+F+LWQ +S F WP+FS F
Sbjct: 199 ITKESIERHLYTAGSPWPDVLIRTSGETRLSNFMLWQACHSHLAFCNVLWPNFSFRHLFW 258
Query: 225 ALNQYN 230
+ QY
Sbjct: 259 IIFQYQ 264
>gi|257387597|ref|YP_003177370.1| undecaprenyl diphosphate synthase [Halomicrobium mukohataei DSM
12286]
gi|257169904|gb|ACV47663.1| undecaprenyl diphosphate synthase [Halomicrobium mukohataei DSM
12286]
Length = 304
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 112/230 (48%), Gaps = 6/230 (2%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P H+ +I DGN R+A +G AG+ +G E ++ E+ + +T++ FS N
Sbjct: 22 SDAPSHVAVIQDGNRRYAREQGADTTAGYTEGAETTEALLHWCDELAVDEVTLYTFSTEN 81
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKK---NNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
+ RP + L LI+ L+ F + N +++R IG L + + + AE +T
Sbjct: 82 FDRPKEQQEHLFDLIERKLR-AFADTDRVHDNEVRIRAIGETERLPERVRDAIDYAESRT 140
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
L L +A Y R E+ A ++I + ++ G + VD+ I L D DL
Sbjct: 141 ACYDRLQLNVALAYGGRAELLGATRDIARAVDDGELDPESVDADTIEGRLYEGPTRDVDL 200
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFV--FIPEYWPDFSRELFFHALNQYNLR 232
I+RTGG++R S+FL W +E F YWP+F + F A+ Y R
Sbjct: 201 IVRTGGDERTSNFLPWHAKGNEAAVYFCAPYWPEFRKIDFLRAIRTYEHR 250
>gi|194763633|ref|XP_001963937.1| GF20994 [Drosophila ananassae]
gi|190618862|gb|EDV34386.1| GF20994 [Drosophila ananassae]
Length = 300
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 125/227 (55%), Gaps = 5/227 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +MDGN R+A ++ + + GH +G + + ++G++ +T FAFSI N++R
Sbjct: 27 PHHVAFVMDGNRRFARSQQIDKIEGHSRGFAKLADCLRWCLDIGVREVTTFAFSIENFKR 86
Query: 71 PVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
E+ L L + + L + L ++ I++R+IGN L D+ ++ A T N
Sbjct: 87 SSEEVEGLFNLAREKFARLLEETERLNEHGIRIRIIGNIGLLPQDLQKLVATAMLSTEQN 146
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L L +AF Y+SRDEI++A++ + + S + D++ L+ + L T P PDL+ R
Sbjct: 147 DKLFLNVAFAYTSRDEITQAVETVLRH-SSDDLRPEDINERLMEECLYTRHSPPPDLVFR 205
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
T GE RLSDF++WQ++ S F WP + F ++ Y RDR
Sbjct: 206 TSGETRLSDFMMWQLSTSVLYFSNVLWPQITFWHFLASILAYQ-RDR 251
>gi|290890490|ref|ZP_06553565.1| hypothetical protein AWRIB429_0955 [Oenococcus oeni AWRIB429]
gi|290479886|gb|EFD88535.1| hypothetical protein AWRIB429_0955 [Oenococcus oeni AWRIB429]
Length = 167
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 91/164 (55%), Gaps = 3/164 (1%)
Query: 79 VKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNY 138
+KL F L +NNIKV IG L + A + T+ NTGL L A NY
Sbjct: 1 MKLPIDFFNTFVPELIENNIKVEGIGEIDDLPEKTRQAFLNAVEDTKDNTGLILNFAINY 60
Query: 139 SSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD---PDLIIRTGGEKRLS 195
R EI A K+I + G + + D+D L L T+ + + PDLIIRT GE+R+S
Sbjct: 61 GGRTEIVDATKSIVNQVLQGKIKTEDIDEKLFQNNLLTNTLAEKANPDLIIRTSGEQRIS 120
Query: 196 DFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+FLLWQ AYSEF F P+ WPD++ E AL Y+ RDRRFG +
Sbjct: 121 NFLLWQSAYSEFYFSPKLWPDYTAEDLEEALAAYSNRDRRFGKI 164
>gi|302692104|ref|XP_003035731.1| hypothetical protein SCHCODRAFT_81158 [Schizophyllum commune H4-8]
gi|300109427|gb|EFJ00829.1| hypothetical protein SCHCODRAFT_81158 [Schizophyllum commune H4-8]
Length = 261
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 129/237 (54%), Gaps = 8/237 (3%)
Query: 1 MVASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+V ++++ P P H+ +MDGN R+A +R + GH G ++ + ++ ++
Sbjct: 20 IVIRILAAGPVPKHVAFVMDGNRRYARSRHMRVQEGHSDGFVALRRLLGICLRLNVRCVS 79
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCV 116
++AF+I+N++RP E+ L+ L ++ L + L++ +++ V+G + L + +
Sbjct: 80 VYAFAIDNFKRPPEEVDALMTLAETKLTELCRHGDLLQQYGVRLNVVGRKDMLPESVREA 139
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT 176
++ AE+ TR N L + Y+SRDE++ A++ Q+ ++ SV VD I K+L T
Sbjct: 140 VRVAEEMTRNNHRAILNLCMPYASRDEMTHAVQAAAQE-KADSVGYPLVDEKDIEKHLMT 198
Query: 177 SDVPDP--DLIIRTGGEKRLSDFLLWQ-VAYSEFVFIPEYWPDFSRELFFHALNQYN 230
S P D+++RT G +RLSD++LWQ ++ F YWP+F F + Y
Sbjct: 199 STAGSPPLDILVRTSGVQRLSDYMLWQSCEKAQLHFSTTYWPEFGLSDFLPIILDYQ 255
>gi|302829146|ref|XP_002946140.1| hypothetical protein VOLCADRAFT_55634 [Volvox carteri f.
nagariensis]
gi|300268955|gb|EFJ53135.1| hypothetical protein VOLCADRAFT_55634 [Volvox carteri f.
nagariensis]
Length = 262
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 115/230 (50%), Gaps = 14/230 (6%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +MDGN R+A + L + GH G +++ E+G+K +T++AFSI+N++R
Sbjct: 26 PVHVAFVMDGNRRYAERQHLDKATGHTHGYGKMVDVIHWCIELGVKYITVYAFSIDNFKR 85
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDI----LCVLKEAEDQTRL 126
E++ L++L ++ + L ++N G R+ + D+ V A R
Sbjct: 86 SPDEVAALMQLA----EQKYIELAQDNGLAEREGIRMHIVGDLELPPPAVQGAAARLMRG 141
Query: 127 NTGL-----NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT-SDVP 180
L L + F+Y++ +E A+ I Q + G + DV S + L T S P
Sbjct: 142 TAALPRHRATLNVCFSYTASEESVNAVHEIQQAVRDGLLLPGDVTSETLMGALHTGSSCP 201
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
DL+IRT GE RLSDFLLWQ A++ ++ WPD S F + Y
Sbjct: 202 PVDLLIRTSGETRLSDFLLWQAAHAHLCYLRTLWPDLSYWDFARCVMSYK 251
>gi|262167721|ref|ZP_06035423.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae RC27]
gi|262023786|gb|EEY42485.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae RC27]
Length = 157
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 92/150 (61%)
Query: 93 LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIF 152
+ KNN+++RVIG++ + + + +AE T NTG+ + IA NY + +I +A + +
Sbjct: 1 MHKNNLRLRVIGDKSRFSERLQTKIAQAEQLTASNTGMVVNIAANYGGQWDILQATQALA 60
Query: 153 QDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPE 212
+ + G + D+D + ++L +D+PD DL+IRT GE R+S+F+LWQ+AY+E F P
Sbjct: 61 EKVTQGELQPSDIDEDVFKQHLTMADLPDVDLLIRTSGECRISNFMLWQLAYAEMYFTPV 120
Query: 213 YWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+WP+F A+ + R+RRFG ++
Sbjct: 121 FWPEFDENCLIEAVTWFVNRERRFGCTGEQ 150
>gi|114554915|ref|XP_001144064.1| PREDICTED: similar to dehydrodolichyl diphosphate synthase isoform
10 [Pan troglodytes]
gi|332808106|ref|XP_001143548.2| PREDICTED: dehydrodolichyl diphosphate synthase isoform 3 [Pan
troglodytes]
Length = 299
Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 119/234 (50%), Gaps = 38/234 (16%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A+++ + P P HI IMDGN R+A + R GH +G E + +GI +T+
Sbjct: 16 CANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R SE+ L+ L + S L + L+K+ + +RV+G+ L D+ ++
Sbjct: 76 YAFSIENFKRSKSEVDGLMDLARQKFSRLMEEQEKLQKHGVCIRVLGDLHLLPLDLQELI 135
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+A T+ NY++ D+ SL+ K L T+
Sbjct: 136 AQAVQATK-----------NYNN-----------------------DISESLLDKCLYTN 161
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
P PD++IRT GE RLSDFLLWQ ++S VF P WP+++ F A+ Q+ +
Sbjct: 162 RSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQM 215
>gi|296207141|ref|XP_002750513.1| PREDICTED: dehydrodolichyl diphosphate synthase isoform 2
[Callithrix jacchus]
Length = 299
Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 119/234 (50%), Gaps = 38/234 (16%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A+++ + P P HI IMDGN R+A + R GH +G E + +GI +T+
Sbjct: 16 CANIIKAGPVPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R SE+ L+ L + S L + L+K+ + +RV+G+ L D+ ++
Sbjct: 76 YAFSIENFKRSKSEVDGLMDLARQKFSRLMEEQEKLQKHGVCIRVLGDLHLLPLDLQELI 135
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+A T+ NY++ D+ SL+ K L T+
Sbjct: 136 AQAVQATK-----------NYNN-----------------------DISESLLDKCLYTN 161
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
P PD++IRT GE RLSDFLLWQ ++S VF P WP+++ F A+ Q+ +
Sbjct: 162 RSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQM 215
>gi|169860208|ref|XP_001836739.1| undecaprenyl pyrophosphate synthetase [Coprinopsis cinerea
okayama7#130]
gi|116502061|gb|EAU84956.1| undecaprenyl pyrophosphate synthetase [Coprinopsis cinerea
okayama7#130]
Length = 261
Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 122/237 (51%), Gaps = 10/237 (4%)
Query: 1 MVASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
++ ++++ P P H+ +MDGN R+A GH +G ++ +G+ +T
Sbjct: 16 IIIKILAAGPVPKHVAFVMDGNRRYARKHQKEIPQGHSEGFVALKRVLEVCLYLGVSCVT 75
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCV 116
++AF+I+N++R E+ L+ L ++ L + L K +++ V+G + L + +
Sbjct: 76 VYAFAIDNFKRSPEEVDALMHLAETKLVELCEHGDLLDKYGVRLNVLGRKELLPEPVRAA 135
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGS--VCSHDVDSSLIAKYL 174
+ +AED TR N L + Y SRDEI+ A++ Q G V D++S+L+
Sbjct: 136 IAKAEDMTRNNKRAILNVCMPYGSRDEITTAVQLSVQKAMEGDCVVTEDDIESNLMTTL- 194
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFFHALNQYN 230
+ P D++IRT G KRLSDFLLWQ ++ F +WPD++ F L Y
Sbjct: 195 --GNSPPLDILIRTSGVKRLSDFLLWQCCEDTQIHFTDTFWPDYALTDFIPILLDYQ 249
>gi|297282609|ref|XP_002802297.1| PREDICTED: dehydrodolichyl diphosphate synthase-like [Macaca
mulatta]
Length = 299
Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 119/234 (50%), Gaps = 38/234 (16%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A+++ + P P HI IMDGN R+A + R GH +G E + +GI +T+
Sbjct: 16 CANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R SE+ L+ L + S L + L+K+ + +RV+G+ L D+ ++
Sbjct: 76 YAFSIENFKRSKSEVDGLMDLARQKFSRLMEEQEKLQKHGVCIRVLGDLHLLPLDLQELI 135
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+A T+ NY++ D+ SL+ K L T+
Sbjct: 136 AQAVQATK-----------NYNN-----------------------DISESLLDKCLYTN 161
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
P PD++IRT GE RLSDFLLWQ ++S VF P WP+++ F A+ Q+ +
Sbjct: 162 RSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQM 215
>gi|221046358|dbj|BAH14856.1| unnamed protein product [Homo sapiens]
Length = 299
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 119/234 (50%), Gaps = 38/234 (16%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A+++ + P P HI IMDGN R+A + R GH +G E + +GI +T+
Sbjct: 16 CANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R SE+ L+ L + S L + L+K+ + +RV+G+ L D+ ++
Sbjct: 76 YAFSIENFKRSKSEVDGLMDLARQKFSRLMEEKEKLQKHGVCIRVLGDLHLLPLDLQELI 135
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+A T+ NY++ D+ SL+ K L T+
Sbjct: 136 AQAVQATK-----------NYNN-----------------------DISESLLDKCLYTN 161
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
P PD++IRT GE RLSDFLLWQ ++S VF P WP+++ F A+ Q+ +
Sbjct: 162 RSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQM 215
>gi|164659390|ref|XP_001730819.1| hypothetical protein MGL_1818 [Malassezia globosa CBS 7966]
gi|159104717|gb|EDP43605.1| hypothetical protein MGL_1818 [Malassezia globosa CBS 7966]
Length = 291
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 119/218 (54%), Gaps = 13/218 (5%)
Query: 6 MSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVG-IKNLTIFAF 63
+S+ P P HI IMDGN RW+ A + GH KG E ++ + I+ +T++AF
Sbjct: 61 LSTGPLPRHIAFIMDGNRRWSRAHNMRVQEGHLKGFEALKRVLDLCLSLQRIEVVTVYAF 120
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+I+N++R E+ L++L ++ L + + + +++I +RV+G+R L + +
Sbjct: 121 AIDNFKRDPDEVHALMELARTRLLELYEHSDFVARHSICIRVVGHREYLPPSVQETARRV 180
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E+ T+ NTG L I Y+S+ EI A + ++ S + + ++ +L D P
Sbjct: 181 EEATQHNTGPTLNICMPYASQAEICHAAQQATKN-------SQQLTPASLSSHLMVPDDP 233
Query: 181 DPDLIIRTGGEKRLSDFLLWQV-AYSEFVFIPEYWPDF 217
D+++RT RLSDFLLWQ +++ F+ +YWP F
Sbjct: 234 PVDILVRTSRVSRLSDFLLWQSNEHTQMHFVDQYWPMF 271
>gi|221041656|dbj|BAH12505.1| unnamed protein product [Homo sapiens]
Length = 299
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 119/234 (50%), Gaps = 38/234 (16%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A+++ + P P HI IMDGN R+A + R GH +G E + +GI +T+
Sbjct: 16 CANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R SE+ L+ L + S L + L+K+ + +RV+G+ L D+ ++
Sbjct: 76 YAFSIENFKRSKSEVDGLMDLARQKFSRLMEEKEKLQKHGVCIRVLGDLHLLPLDLQELI 135
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+A T+ NY++ D+ SL+ K L T+
Sbjct: 136 AQAVQATK-----------NYNN-----------------------DISESLLDKCLYTN 161
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
P PD++IRT GE RLSDFLLWQ ++S VF P WP+++ F A+ Q+ +
Sbjct: 162 RSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQM 215
>gi|294817708|ref|ZP_06776350.1| Undecaprenyl pyrophosphate synthetase [Streptomyces clavuligerus
ATCC 27064]
gi|326446583|ref|ZP_08221317.1| undecaprenyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
gi|294322523|gb|EFG04658.1| Undecaprenyl pyrophosphate synthetase [Streptomyces clavuligerus
ATCC 27064]
Length = 300
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 117/227 (51%), Gaps = 4/227 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+G+I+DGN RWA G A + +G ++V+ GI +T++A S +N RR
Sbjct: 77 PRHVGVILDGNRRWAEGHGTTLEAAYARGAARVADLVSWCETEGIAVVTVWALSRDNLRR 136
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
+ + ++ L G + + +I R+IG L L+ D+T +
Sbjct: 137 DAAAVGRILDATAVGLA-GIAASGRWHI--RLIGETDLLPAAPARRLRSVADRTATGSPG 193
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A Y R +I+ A++ + + +G + V S + +YL T+ +PD DL+IRT G
Sbjct: 194 TLNVAVAYDGRADIAGAVRGLLRSGVTGGTAA-AVRESDVERYLSTAGLPDVDLVIRTSG 252
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+RLS FL WQ AY+E F WP FS + F AL Y R RRFG
Sbjct: 253 ERRLSGFLPWQTAYAELHFTAALWPAFSFDDFTVALRSYRARRRRFG 299
>gi|254550078|ref|ZP_05140525.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis '98-R604 INH-RIF-EM']
Length = 242
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 114/212 (53%), Gaps = 7/212 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI ++ DGN RWA + G + G+R G E++ E GI+ T++ S N +
Sbjct: 32 PRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWCHEAGIELATVYLLSTENLQ 91
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E++ L+++I +++ N+ VR +G+ + ++ L+ A + T
Sbjct: 92 RDPDELAALIEIITDVVEE--ICAPANHWSVRTVGDLGLIGEEPARRLRGAVESTPEVAS 149
Query: 130 LNLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDSSL---IAKYLDTSDVPDPDLI 185
++ +A Y R EI A++ + +++ +G+ VD+ I++ L TS PDPDL+
Sbjct: 150 FHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVDAVTVEGISENLYTSGQPDPDLV 209
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDF 217
IRT GE+RLS FLLWQ AYSE F +WP F
Sbjct: 210 IRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAF 241
>gi|308457866|ref|XP_003091294.1| hypothetical protein CRE_01415 [Caenorhabditis remanei]
gi|308257399|gb|EFP01352.1| hypothetical protein CRE_01415 [Caenorhabditis remanei]
Length = 317
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 119/239 (49%), Gaps = 22/239 (9%)
Query: 1 MVASMMSSSP-PDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNL 58
++ ++S P P H+ +MDGN R+A ++ L GH KG +I+ GI+ +
Sbjct: 26 LLRRFIASGPIPRHVAFVMDGNRRFAKSKHLGNVIKGHEKGFVQLAKILDWCNRFGIREI 85
Query: 59 TIFAFSINNWRRPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILC 115
T++AFSI N++R E+S L++L + +K L + I R GNR L +
Sbjct: 86 TVYAFSIENFKRSEDEVSGLMRLAEEKFQKLLNDSEKLDEKRICFRFYGNRSLLSSRLQK 145
Query: 116 VLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV---------- 165
++ + E +T G L + Y+SRDEI+R+ + I ++ G V DV
Sbjct: 146 LMSDIEKRTEKFDGGRLNVCMPYTSRDEITRSFETIRNHVKEGKVDVDDVSEYFLNILKK 205
Query: 166 ------DSSLIAKYLDT-SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDF 217
+ S+I LD+ PDL IRT GE RLSDFL+WQ A + F WP+F
Sbjct: 206 CGKFQINESMIDACLDSGCGGTVPDLFIRTSGEHRLSDFLMWQAADTHVYFDDVLWPEF 264
>gi|148698096|gb|EDL30043.1| dehydrodolichyl diphosphate synthase, isoform CRA_d [Mus musculus]
Length = 310
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 108/192 (56%), Gaps = 6/192 (3%)
Query: 53 VGIKNLTIFAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSL 109
+GI +T++AFSI N++R SE+ L+ L + S L + L+K+ + +RV+G+ L
Sbjct: 45 LGILEVTVYAFSIENFKRSKSEVDGLLDLARQKFSCLMEEQEKLQKHGVCIRVLGDLHLL 104
Query: 110 DDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL 169
D+ + A T+ L + F Y+SR EI+ A++ + +E G + DV SL
Sbjct: 105 PLDLQEKIAHAIQATKNYNKCFLNVCFAYTSRHEIANAVREMAWGVEQGLLEPSDVSESL 164
Query: 170 IAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQY 229
+ K L ++ P PD++IRT GE RLSDFLLWQ ++S VF P WP+++ A+ Q+
Sbjct: 165 LDKCLYSNHSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLCEAILQF 224
Query: 230 NLRDRRFGGLSK 241
R G L K
Sbjct: 225 Q---RNHGALQK 233
>gi|145628149|ref|ZP_01783950.1| hypothetical protein CGSHi22121_03890 [Haemophilus influenzae
22.1-21]
gi|144979924|gb|EDJ89583.1| hypothetical protein CGSHi22121_03890 [Haemophilus influenzae
22.1-21]
Length = 173
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 88/146 (60%)
Query: 93 LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIF 152
L KNNI +++IG+ + + +K+AE+ T NT L L IA NY +I +A K I
Sbjct: 26 LHKNNICLKIIGDVSRFSETLQEKIKKAENLTEKNTALTLNIAANYGGCWDIVQATKQIA 85
Query: 153 QDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPE 212
+ ++ + D+++S +L T + P DL+IRT GE+R+S+FLLWQ+AY+E F
Sbjct: 86 EKVKKEEMSVSDINNSTFQHHLATQNAPPVDLLIRTSGEQRISNFLLWQIAYAELYFSDV 145
Query: 213 YWPDFSRELFFHALNQYNLRDRRFGG 238
WPDF++ F A+ Y R RRFGG
Sbjct: 146 LWPDFNQLEFNRAIASYQQRHRRFGG 171
>gi|88856093|ref|ZP_01130754.1| undecaprenyl pyrophosphate synthetase [marine actinobacterium
PHSC20C1]
gi|88814661|gb|EAR24522.1| undecaprenyl pyrophosphate synthetase [marine actinobacterium
PHSC20C1]
Length = 226
Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 121/231 (52%), Gaps = 15/231 (6%)
Query: 16 IIMDGNGRWAAARGLPRCAGHRKGIEV-FNEIVAAAAEVGIKNLTIFAFSINNWR-RPVS 73
+I+DGN RWA + L A + + E + ++ I T++ S +N R
Sbjct: 1 MIIDGNRRWAKLKDLETAAHGHRAGAAKYREFLVWCDDLDISVATLYLLSTDNLTGRSPE 60
Query: 74 EISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLF 133
E+ EL +I L + + + +V+ +G+ L D + L A D+T NTGL++
Sbjct: 61 ELGELFTIIGD-LAEDLSHFR--DWRVQHVGSDAGLPDQLKAQLTGARDRTASNTGLHVN 117
Query: 134 IAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDS-------SLIAKYLDTSDVPDPDLII 186
+A Y R EI+ A++ I + + S H +D+ LI ++L T+ PDPDL+I
Sbjct: 118 LAIGYGGRHEIAEAMRRI---VRNHSEEGHSLDALAELLTPELIGEHLYTTGQPDPDLVI 174
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE+R+SDF+LWQ A+SE F+ PD F AL ++ R+RR+G
Sbjct: 175 RTSGEQRISDFMLWQTAHSELYFVEALGPDLREVDFLRALRDFSRRNRRYG 225
>gi|57167824|ref|ZP_00366964.1| undecaprenyl diphosphate synthase [Campylobacter coli RM2228]
gi|57020946|gb|EAL57610.1| undecaprenyl diphosphate synthase [Campylobacter coli RM2228]
Length = 187
Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 110/196 (56%), Gaps = 11/196 (5%)
Query: 43 FNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRV 102
+++ A E GI NL++FAFS NW RP EI + +L+ L + +KNN+++R
Sbjct: 1 MQKLMEACVEEGISNLSLFAFSTENWNRPQDEIEFIFELLDRCLDEALKEFEKNNVRLRA 60
Query: 103 IGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCS 162
IG+ LD + + E++T+ L + +A +Y ++DEI R++K + IE G
Sbjct: 61 IGDLSRLDTHLQEKIALVEEKTKHCDLLCVNLAISYGAKDEIVRSVKRL---IEKG---- 113
Query: 163 HDVDSSLIAKYLDTSDVP-DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSREL 221
+++ I+ D D+P D DL++R G KRLS+FLLWQ AY+E F +P ++
Sbjct: 114 LEINEKNIS---DNLDLPLDVDLMLRVGNAKRLSNFLLWQCAYAEIYFSETLFPSLTKRE 170
Query: 222 FFHALNQYNLRDRRFG 237
F + ++ R+R FG
Sbjct: 171 FKKIIKEFRKRERTFG 186
>gi|327308808|ref|XP_003239095.1| hypothetical protein TERG_01080 [Trichophyton rubrum CBS 118892]
gi|326459351|gb|EGD84804.1| hypothetical protein TERG_01080 [Trichophyton rubrum CBS 118892]
Length = 304
Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 122/229 (53%), Gaps = 3/229 (1%)
Query: 1 MVASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
++ ++ P P HI II DGN RWA +R + GH+ G + I+ + G++ +T
Sbjct: 19 LLMKIVQQGPVPKHIAIIADGNRRWAKSREINVRNGHQMGAKSLENILDLFFDTGVECVT 78
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFY-SLKKNNIKVRVIGNRLSLDDDILCVLK 118
+ FSI N++RP ++ +L+ + +++++K Y S K I+ RV+G L + I +++
Sbjct: 79 AYLFSIENFKRPKEQVDDLMDISETWIQKYLYPSPNKRKIRFRVLGRLELLPEKIRKLIE 138
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
+ ++T + F Y+SRDEI+RAI+ ++ ++ + I +D +
Sbjct: 139 KLTEKTADFDEGTFNVCFPYTSRDEIARAIEMTVRNHNDSPENVENITAEAIDSNMDICN 198
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPE-YWPDFSRELFFHAL 226
P D++IRT G RLSDFLLWQ + + +WP+F F A+
Sbjct: 199 DPPLDVLIRTSGVCRLSDFLLWQCHRDTVIEVLNIHWPEFRYWHLFLAV 247
>gi|289580902|ref|YP_003479368.1| undecaprenyl diphosphate synthase [Natrialba magadii ATCC 43099]
gi|289530455|gb|ADD04806.1| undecaprenyl diphosphate synthase [Natrialba magadii ATCC 43099]
Length = 325
Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 111/229 (48%), Gaps = 4/229 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+ P H+ +I DGN R+A G GHR G + +++ ++G++ LT++ FS N
Sbjct: 22 AGAPTHVAVIQDGNRRYARRNGGDAHEGHRAGAQTTEQVLEWCQDIGVEELTLYTFSTEN 81
Query: 68 WRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
+ RP E L +L+ L + + N + ++ IG L + + + AE +T+
Sbjct: 82 FNRPEDEREALYELLCEKLTEFADADRVHDNEVCIQAIGEIDLLPEHVRDAVAYAERRTQ 141
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
L IA Y R + A + + +D+++ + ++D I + L V D DLI
Sbjct: 142 EYDQFVLNIALAYGGRSRLLEAARGVARDVDADKIDPGEIDVGTIEQRLYDQPVRDVDLI 201
Query: 186 IRTGGEKRLSDFLLWQVAYSEFV--FIPEYWPDFSRELFFHALNQYNLR 232
IR GGE+R S+FL W +E F YWP+FS+ F + Y R
Sbjct: 202 IRPGGEERTSNFLPWHANGNEAAVFFCTPYWPEFSKADFLRGIRTYEHR 250
>gi|126540557|emb|CAM46102.1| dehydrodolichyl diphosphate synthase [Mus musculus]
gi|126541189|emb|CAM46079.1| dehydrodolichyl diphosphate synthase [Mus musculus]
Length = 299
Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 122/244 (50%), Gaps = 41/244 (16%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A+++ + P P HI IMDGN R+A + R GH +G E + +GI +T+
Sbjct: 16 CANIIKAGPVPKHIAFIMDGNRRYAKKCQVERQEGHTQGFNKLAETLRWCLNLGILEVTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R SE+ L+ L + S L + L+K+ + +RV+G+ L D+
Sbjct: 76 YAFSIENFKRSKSEVDGLLDLARQKFSCLMEEQEKLQKHGVCIRVLGDLHLLPLDL---- 131
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+++I+ A I++ ++DV SL+ K L ++
Sbjct: 132 -----------------------QEKIAHA-------IQATKNYNNDVSESLLDKCLYSN 161
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
P PD++IRT GE RLSDFLLWQ ++S VF P WP+++ A+ Q+ R G
Sbjct: 162 HSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLCEAILQFQ---RNHG 218
Query: 238 GLSK 241
L K
Sbjct: 219 ALQK 222
>gi|224084084|ref|XP_002307209.1| predicted protein [Populus trichocarpa]
gi|222856658|gb|EEE94205.1| predicted protein [Populus trichocarpa]
Length = 287
Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 118/239 (49%), Gaps = 28/239 (11%)
Query: 4 SMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
++S P P+H IMDGN R+A L AGHR G V ++ E+G+ +TI+A
Sbjct: 26 CILSMGPIPNHFAFIMDGNRRYAKKEKLEEGAGHRAGFSVLMSMLKYCYELGVTYVTIYA 85
Query: 63 FSINNWRRPVSEISELVKL----IKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
FSI N++R E+ L+ L I+ LK+ + K I+V IGN L + +
Sbjct: 86 FSIENFKRKPDEVQNLMDLILEKIEGLLKEESL-VNKYGIRVYFIGNLKLLSKPVRVAAE 144
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAI----KNIFQDIESGSVCSHD---------- 164
+ T NT L I Y+S DEI +A+ KN +++I+ + SH
Sbjct: 145 KVMKATANNTKCVLLICIAYTSCDEIVQAVHESCKNKWEEIQPCN--SHKSFSGRVEEKL 202
Query: 165 -VDSSL-----IAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDF 217
VD S+ I ++ S P+PD++IR+ GE RLS+FLLWQ + WPD
Sbjct: 203 LVDLSILKVVDIESHMYMSVAPNPDIVIRSSGETRLSNFLLWQTSNCLLYSPNALWPDM 261
>gi|23491567|dbj|BAC16756.1| cis-prenyltransferase [Periploca sepium]
Length = 331
Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 133/268 (49%), Gaps = 30/268 (11%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ S++S P P HI IMDGN R+A + L GHR G ++ E+GIK +TI
Sbjct: 22 IVSIVSVGPIPVHIAFIMDGNRRYAKKKNLLEGTGHRFGYLALINMLKCCYELGIKYVTI 81
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNI---KVRVIGNRLSLDDDILCVL 117
+AFSI+N++R E+ +KLI+ +++ NI +V +GN L+ +
Sbjct: 82 YAFSIDNFKRRPEEVESTMKLIQEKIEELIKEESLLNIYGVRVYFLGNLKLLNKSVRLTA 141
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNI-------FQDIESG-------SVCSH 163
+ A T N+ L I Y+S DEI A++ ++++S S+ ++
Sbjct: 142 ERAMAATAGNSKAVLSICVGYTSTDEIVHAVQECCERKWDEIRELDSSGAGYGLISIGTN 201
Query: 164 D-------VDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPD 216
+ V + I K++ + VPDPD+IIRT GE RLS+FLLWQ A S WP+
Sbjct: 202 EESKGENIVGVADIEKHMYAAVVPDPDIIIRTSGETRLSNFLLWQSADSLLYSPSILWPE 261
Query: 217 FS-RELFFHALNQYNLRDRRFGGLSKKG 243
R L + L+ R F L KKG
Sbjct: 262 IGFRHLVWAVLD----FQRNFHYLKKKG 285
>gi|307107718|gb|EFN55960.1| hypothetical protein CHLNCDRAFT_10741 [Chlorella variabilis]
Length = 254
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 114/211 (54%), Gaps = 4/211 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ + MDGN R+A AR + + GH G + + E+G++ ++++AFSI+N+RR
Sbjct: 21 PRHVALCMDGNRRYAQARHMRQVEGHTFGYRRLIDALEWCLELGVRYVSVYAFSIDNYRR 80
Query: 71 PVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
E+ L+ L + + + + + L ++ ++VRV+G+ + + T +
Sbjct: 81 CGEEVDTLMALAEEKLAHMLQEYDVLVRHGVQVRVVGDLSLAPAAVQVAATRIMEATAQH 140
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
L + F+Y++ +E+ RA+ ++ S S S + ++ + L T P DL++
Sbjct: 141 DRAVLNLCFSYTASEELQRALDDLAAHPAPSSSSGSGSLTAAGLDGQLYTRGCPPVDLLV 200
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDF 217
RT GE RLSDFLLWQ ++ VF P WPDF
Sbjct: 201 RTSGETRLSDFLLWQCRHALLVFTPVLWPDF 231
>gi|297744131|emb|CBI37101.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 124/232 (53%), Gaps = 13/232 (5%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ S++S P P+HI IMDGN R+A + L AGH+ G ++ + E+G+K +TI
Sbjct: 24 IFSVLSVGPIPNHIAFIMDGNRRFAKKQNLIEGAGHKVGYLALMSMLRYSYELGVKYVTI 83
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ ++ L++ +++ L ++V IGN L +
Sbjct: 84 YAFSIENFKRRPEEVQSVMDLMQEKIEQLINEESILNHFGVRVHFIGNLKLLSAPVRLAA 143
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKN--IFQDIESGSVCSHDVDSSLIAKYLD 175
+ A T N+ L I Y+S +EI A++ + + E + + VD I K+L
Sbjct: 144 ERAMLVTACNSKAVLSICVAYTSTNEIMHAVEESCVKKWDEIRELKASGVD--YIEKHLY 201
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPE-YWPDFSRELFFHAL 226
+ PDPD++IRT GE RLS+FLLWQ Y +++ P WP+ F+H L
Sbjct: 202 MAVAPDPDILIRTSGETRLSNFLLWQSQYC-YLYSPSVLWPEIG---FWHLL 249
>gi|158321700|ref|YP_001514207.1| di-trans-poly-cis-decaprenylcistransferase [Alkaliphilus oremlandii
OhILAs]
gi|158141899|gb|ABW20211.1| Di-trans-poly-cis-decaprenylcistransferase [Alkaliphilus oremlandii
OhILAs]
Length = 213
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 114/233 (48%), Gaps = 28/233 (12%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HIGII DGN RWA +GL + G++ GI+ + G+K +T + F+++N +R
Sbjct: 4 PEHIGIIPDGNRRWAEGKGLSKSEGYQSGIDPGLLLFKMCEAAGVKEITYYGFTVDNTKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLS--LDDDILCVLKEAEDQTR 125
P +I K+F +S L K N + V GN S ++L Q
Sbjct: 64 PTDQI-------KAFTDACIHSVEILSKENASLLVAGNTQSPMFPKELLPYTTR---QNF 113
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N G+ + NYS + +++ K+ S+ I K ++T D+ DLI
Sbjct: 114 GNGGIKVNFLVNYSWKWDLNYLKKS-------------KSKSNNINKQIETYDISKVDLI 160
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+R GG +RLS FL Q Y++F + +YWPDF F ALN YN +D GG
Sbjct: 161 VRWGGRRRLSGFLPVQSIYADFYVVDDYWPDFKPSHFIEALNWYNNQDITLGG 213
>gi|3236388|gb|AAD09946.1| unknown [Coxiella burnetii]
Length = 157
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 83/135 (61%), Gaps = 7/135 (5%)
Query: 11 PDHIGIIMDGNGR-WAAA---RGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
P H+ I+M GR W+ RGLPR AGHR G +V IV AAE ++ LT+FAFSI
Sbjct: 26 PRHVAIVM---GRQWSGGLTRRGLPRVAGHRAGAKVVRRIVEYAAEKPLEVLTLFAFSIE 82
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
N RP SE++ L+ L LKK L KNN+++RVIG+ D +L ++ ++D T+
Sbjct: 83 NRARPQSEVNFLMSLFLDSLKKNTEELHKNNVQLRVIGDHREFDKKMLAQIQTSQDLTKH 142
Query: 127 NTGLNLFIAFNYSSR 141
NTGL L IA NYS R
Sbjct: 143 NTGLKLIIALNYSGR 157
>gi|330975397|gb|EGH75463.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 150
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 86/142 (60%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ SS P H+ IIMDGN RWA R LP AGH+ G++ ++ AE ++ LT+FAFS
Sbjct: 8 VPSSVPRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAEARVEVLTLFAFSS 67
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP E+ L++L + L++ L +N I +R+IG+R ++ ++EAE +T
Sbjct: 68 ENWQRPAEEVGALMELFFTALRRETKRLNENEISLRIIGDRSRFHPELQAAMREAEVRTS 127
Query: 126 LNTGLNLFIAFNYSSRDEISRA 147
N+ L IA NY + +I++A
Sbjct: 128 GNSRFVLQIAANYGGQWDIAQA 149
>gi|6319474|ref|NP_009556.1| Rer2p [Saccharomyces cerevisiae S288c]
gi|465535|sp|P35196|RER2_YEAST RecName: Full=Dehydrodolichyl diphosphate synthase; Short=DEDOL-PP
synthase
gi|403317|emb|CAA81271.1| unknown [Saccharomyces cerevisiae]
gi|536188|emb|CAA84938.1| unnamed protein product [Saccharomyces cerevisiae]
gi|4126457|dbj|BAA36577.1| cis-prenyltransferase [Saccharomyces cerevisiae]
gi|285810338|tpg|DAA07123.1| TPA: Rer2p [Saccharomyces cerevisiae S288c]
gi|1582565|prf||2118405F ORF YBR0107
Length = 286
Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 114/217 (52%), Gaps = 11/217 (5%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S+ P H+G IMDGN R+A + + GH G + I+ E G+ T+FAFSI
Sbjct: 28 SNCVPRHVGFIMDGNRRFARKKEMDVKEGHEAGFVSMSRILELCYEAGVDTATVFAFSIE 87
Query: 67 NWRRPVSEISELVKL----IKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
N++R E+ L+ L I+ ++G + K +++++IG+ LD +L ++ A +
Sbjct: 88 NFKRSSREVESLMTLARERIRQITERGELAC-KYGVRIKIIGDLSLLDKSLLEDVRVAVE 146
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T+ N L I F Y+ R+EI A+K + G+ +D S + +L T+ VP
Sbjct: 147 TTKNNKRATLNICFPYTGREEILHAMKETIVQHKKGAA----IDESTLESHLYTAGVPPL 202
Query: 183 DLIIRTGGEKRLSDFLLWQVAYS--EFVFIPEYWPDF 217
DL+IRT G RLSDFL+WQ + + WP+F
Sbjct: 203 DLLIRTSGVSRLSDFLIWQASSKGVRIELLDCLWPEF 239
>gi|124484946|ref|YP_001029562.1| undecaprenyl pyrophosphate synthetase [Methanocorpusculum labreanum
Z]
gi|124362487|gb|ABN06295.1| Undecaprenyl pyrophosphate synthetase [Methanocorpusculum labreanum
Z]
Length = 252
Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 116/230 (50%), Gaps = 11/230 (4%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ II DGN R+A A+G GHR G E+ ++ E+G+ + T +AFS N++R
Sbjct: 23 PTHVAIIQDGNRRYAKAKGKDTAFGHRAGAEITMKVFDWMEELGVIHTTFYAFSTENFKR 82
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNI-----KVRVIGNRLSLDDDILCVLKEAEDQTR 125
E++EL++L F++K +K I + VIG+R ++D +L + + E+ T+
Sbjct: 83 SPEEVNELLEL---FIEKFSEMIKDQRIYDKKVNITVIGDRSLINDRLLQKIHDVEEATK 139
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYL-DTSDVPDPDL 184
+ L A Y R+EI K+I + +G + + + + + ++P DL
Sbjct: 140 DHHHYYLHFAIAYGGRNEILETTKSIVAKVRAGELSPDLITPDCVTERMYPEVEMPPVDL 199
Query: 185 IIRTGGEKRLSDFLLWQVAYSE--FVFIPEYWPDFSRELFFHALNQYNLR 232
IIRT +KR S+FL W +E F WP+F AL Y+ R
Sbjct: 200 IIRTANDKRTSNFLPWLANGNEAAVCFCVPPWPEFRYVDMVRALRTYDQR 249
>gi|294671223|ref|ZP_06736076.1| hypothetical protein NEIELOOT_02933 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307051|gb|EFE48294.1| hypothetical protein NEIELOOT_02933 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 152
Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 90/150 (60%), Gaps = 6/150 (4%)
Query: 93 LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIF 152
+ ++N++++VIG+R + +I+ ++ AE T N+GL L IA +Y R +I +A+ +
Sbjct: 1 MHEHNMRLKVIGDRSRFNAEIVAGIEAAESLTAGNSGLTLTIAADYGGRWDILQAVNKLL 60
Query: 153 QDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPE 212
+ ++ S + L DVP+PDL IRTGGE R+S+FLLWQ+AY+E F
Sbjct: 61 ------AAGKKEITESDLNAGLMLGDVPEPDLFIRTGGEMRISNFLLWQMAYAELYFTDT 114
Query: 213 YWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
WPDF + F A+ + R+RRFG S++
Sbjct: 115 LWPDFDSQAFQTAIASFQQRERRFGRTSEQ 144
>gi|221053366|ref|XP_002258057.1| dehydrodolichyl diphosphate synthetase [Plasmodium knowlesi strain
H]
gi|193807890|emb|CAQ38594.1| dehydrodolichyl diphosphate synthetase,putative [Plasmodium
knowlesi strain H]
Length = 314
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 130/277 (46%), Gaps = 58/277 (20%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
HI IIMDGN R+A +GL GH G + +I+ + IK L++F+ S+ N+ R
Sbjct: 22 HISIIMDGNRRFAKEKGLHSSLGHYMGSKALIQIIEICVRLKIKVLSVFSLSLLNYNRSP 81
Query: 73 SEISELVKL-IKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
EI L L + + + F+ ++ N I+++VIGN +++ ++ + E +T
Sbjct: 82 EEIHFLFYLNLLILINEDFFMNFIRDNKIRIKVIGNLSYINEAYRKIIHDIEQKTEQFDN 141
Query: 130 LNLFIAFNYSSRDEIS-------------------------------------------R 146
L L I F+Y+SR+E+S R
Sbjct: 142 LLLNIFFSYTSRNEMSLCKFNPNLYFNTYKSLLEERKVLCTSSSTLANQDDSDECDYLER 201
Query: 147 AIKN----IFQDIESGSVCS-------HDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLS 195
+KN + Q E +C + K L TSD+P P+++IRT GEKRLS
Sbjct: 202 ILKNERIDLDQMFEVDCICGGKSFLNREQIKIVNYHKKLLTSDLPPPNILIRTSGEKRLS 261
Query: 196 DFLLWQVA-YSEFVFIPEYWPDFSRELFFHALNQYNL 231
DF+L+Q++ ++E FI EYWP F+ F + + Y +
Sbjct: 262 DFMLYQISEFTEIYFINEYWPIFNFLQFIYVILHYTI 298
>gi|255525210|ref|ZP_05392152.1| Di-trans-poly-cis-decaprenylcistransferase [Clostridium
carboxidivorans P7]
gi|296188748|ref|ZP_06857135.1| hypothetical protein CLCAR_4283 [Clostridium carboxidivorans P7]
gi|255511073|gb|EET87371.1| Di-trans-poly-cis-decaprenylcistransferase [Clostridium
carboxidivorans P7]
gi|296046675|gb|EFG86122.1| hypothetical protein CLCAR_4283 [Clostridium carboxidivorans P7]
Length = 210
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 113/233 (48%), Gaps = 31/233 (13%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HIGII DGN RWA GL + AG+ G++ EI E+GIK LT + F+++N +R
Sbjct: 4 PNHIGIIPDGNRRWAVNHGLEKEAGYAWGLQPGMEIFKICKELGIKELTYYGFTVDNTKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS--LDDDILCVLKE---AEDQTR 125
P + K + + L K + + V+GN S ++L K + +
Sbjct: 64 PKVQ----TKAFTTACVEAVRMLSKEDASLLVVGNSSSPMFPRELLPFTKRKFFGKGTMK 119
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
+N NY ++S H++D++ YL +SD+ DLI
Sbjct: 120 IN------FLVNYGWEWDLSPV---------------HNLDNN-TKHYLKSSDINRVDLI 157
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
IR GG +RLS FL Q YS+F I +YWPDF + ALN Y+ +D GG
Sbjct: 158 IRWGGRRRLSGFLPVQSVYSDFYIIDDYWPDFKKSQLMDALNWYSTQDVTLGG 210
>gi|255713306|ref|XP_002552935.1| KLTH0D04906p [Lachancea thermotolerans]
gi|238934315|emb|CAR22497.1| KLTH0D04906p [Lachancea thermotolerans]
Length = 362
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 115/228 (50%), Gaps = 7/228 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IMDGN R+A + LP +GH G ++ +G+K ++ +AFSI N+ R
Sbjct: 83 PEHVSFIMDGNRRYAKSLSLPVKSGHEAGAITLLNLLTVCRALGVKTVSAYAFSIENFNR 142
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNN-----IKVRVIGNRLSLDDDILCVLKEAEDQTR 125
P E+ L L+ L + + N +++ V+G R + ++ + E T
Sbjct: 143 PQEEVDTLTSLLAEKLDEVARRAQDCNSELFGLRLCVVGERSRISKELNDRISSVERMTS 202
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT-SDVPDPDL 184
+ L+I F Y+SR++I AI + + + + +D S++ ++ + + DL
Sbjct: 203 EGDSMMLYICFPYTSRNDIYHAIYDCAETAKYHGFPAAQIDESVLTNHMMLRENSNNCDL 262
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFV-FIPEYWPDFSRELFFHALNQYNL 231
++RT G RLSD++LWQV + V F WPD+ FF L +++
Sbjct: 263 LVRTSGHTRLSDYMLWQVHQNGHVEFSSTLWPDYGFLEFFRVLLKWSF 310
>gi|331236692|ref|XP_003331004.1| hypothetical protein PGTG_12967 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309309994|gb|EFP86585.1| hypothetical protein PGTG_12967 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 320
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 132/269 (49%), Gaps = 38/269 (14%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IMDGN R++ +G+ GH +G ++ +G+ ++T++AF+I+N+RR
Sbjct: 45 PKHISFIMDGNRRYSREQGISIQQGHFRGFLSLKRLLEFLLRLGVSHITVYAFAIDNYRR 104
Query: 71 PVSEISELVKLIKSFL----KKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
EI +L+ + KS + ++G ++ I+VR++G L D+ ++ + T
Sbjct: 105 TAEEIEKLMDMGKSKMLEICERGEL-FERFGIRVRMVGRVDLLPPDVQVLVARVQALTAK 163
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N + IAF+YS+++EI+ AI Q+ + +D +A +L T+ P D+++
Sbjct: 164 NNRGVINIAFSYSAQEEIASAITQTVQEAMDRKISPSSIDIDTLASHLYTTHTPPLDMLV 223
Query: 187 RTGGEKRLSDFLLWQ--------------------------------VAYSEFVFIPEYW 214
R+ G R+SD+LLWQ V + + +P +W
Sbjct: 224 RSSGVNRISDYLLWQLIINSTRYVKNNEEETTDDWGNHTPIKLDRNIVEGAAYHIVPTHW 283
Query: 215 PDFSRELFFHALNQYNLRD-RRFGGLSKK 242
P+F + + ++ L + R++ GL+ +
Sbjct: 284 PNFGMDDMVPIILKWQLGEFRKYLGLTTE 312
>gi|332016624|gb|EGI57495.1| Dehydrodolichyl diphosphate synthase [Acromyrmex echinatior]
Length = 239
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 99/204 (48%), Gaps = 30/204 (14%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGN R+A + LP G+ KG + E++ + I TI+AFSI N++R E+
Sbjct: 1 MDGNRRYAKKQNLPIAEGYSKGYDKMVELIYLCRTLDIVEFTIYAFSIGNFKRNKEEVDS 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR---LNTGLNLFI 134
L+ L + K +L++ + R ++
Sbjct: 61 LMNLARQKFKD---------------------------LLEDKHNMFRPAFRKCAISAIA 93
Query: 135 AFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRL 194
+F + RDEI+ AIK+I Q ++ + D++ LI L T P+PD++IRT GE RL
Sbjct: 94 SFCHPPRDEITHAIKDIIQGVKDNDILLEDINEDLITNCLYTYKSPNPDILIRTSGEIRL 153
Query: 195 SDFLLWQVAYSEFVFIPEYWPDFS 218
SDFLLWQ++ + FI WPD S
Sbjct: 154 SDFLLWQISNTCIYFIKVLWPDIS 177
>gi|308812834|ref|XP_003083724.1| MGC52912 protein (ISS) [Ostreococcus tauri]
gi|116055605|emb|CAL58273.1| MGC52912 protein (ISS) [Ostreococcus tauri]
Length = 298
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 112/224 (50%), Gaps = 6/224 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ A++ P H+ +IMDGN R A RG GHR G E + ++G+K L++
Sbjct: 21 VCAALRRRGVPGHVAVIMDGNRRHARRRGASATVGHRAGAETLSAACEWCFDLGVKVLSV 80
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLK--KGFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+A S N+ R E+ L +L L+ L ++ +V V G+ +L +
Sbjct: 81 YALSTENFGRAEDELDGLFELATERLEMLGKDARLARHRARVTVSGDLNALPKAVREAAM 140
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAK--YLDT 176
+ T N G L + Y+ R++++RAI +++++G + + DV+ + + Y +
Sbjct: 141 AVMEATAANDGPILNVCMAYTGREDLARAIVETRKEVKAGRLDASDVNERALERRLYGQS 200
Query: 177 SDVPDP--DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS 218
P P DL++RT GE RLSD++L ++ VF WPDF+
Sbjct: 201 GGAPLPAVDLLVRTSGETRLSDYMLMNCRFAALVFTETLWPDFT 244
>gi|150389054|ref|YP_001319103.1| di-trans-poly-cis-decaprenylcistransferase [Alkaliphilus
metalliredigens QYMF]
gi|149948916|gb|ABR47444.1| Di-trans-poly-cis-decaprenylcistransferase [Alkaliphilus
metalliredigens QYMF]
Length = 219
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 117/229 (51%), Gaps = 15/229 (6%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+I DGN RWAA +GL + AG+ KG+ E+ E+G+K LT + F+ +N +R
Sbjct: 5 PSHIGVIPDGNRRWAAGQGLAKEAGYEKGLNPGLELYGLCKELGVKELTFYGFTQDNTKR 64
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG- 129
P + K ++ L K + ++ VIGN S + L +T+ G
Sbjct: 65 PSIQREAFQKSCVDAVEM----LSKEDAELLVIGNDSS--NLFPKQLIPYRKRTKFGEGR 118
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L + NY + ++S + Q+++ S + ++ +++ ++D+ DLIIR G
Sbjct: 119 LKVNFLVNYGWQWDLSHGLS---QEVKKNSSSNENIMTNIA-----SADISRVDLIIRWG 170
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
G +RLS FL Q YS+ + YWPDF + + AL YN +D GG
Sbjct: 171 GRRRLSGFLPVQSIYSDLYVVDAYWPDFKPQHLYDALEWYNQQDVTLGG 219
>gi|255027466|ref|ZP_05299452.1| undecaprenyl diphosphate synthase [Listeria monocytogenes FSL
J2-003]
Length = 112
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/112 (48%), Positives = 71/112 (63%)
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
TGL L A NY R EI A K +++E + D+ + +L +S + DPDL+IR
Sbjct: 1 TGLTLNFALNYGGRSEIITAAKEAMKELELEGKSADDLTEEKLNDHLMSSGLGDPDLLIR 60
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
T GE RLS+F+LWQ+AYSEF F +WPDFS+E F A+ +Y R RRFGGL
Sbjct: 61 TSGELRLSNFMLWQLAYSEFYFTDTHWPDFSKEDFLQAIIEYQNRSRRFGGL 112
>gi|323704142|ref|ZP_08115721.1| Di-trans-poly-cis-decaprenylcistransferase [Thermoanaerobacterium
xylanolyticum LX-11]
gi|323536208|gb|EGB25980.1| Di-trans-poly-cis-decaprenylcistransferase [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 216
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 118/231 (51%), Gaps = 22/231 (9%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HIG+I DGN RWA R +P+ AG+ G+E + E+GIK LT + F+ +N +R
Sbjct: 5 PNHIGVIPDGNRRWAQNRNMPKEAGYSYGLEPGITLYKMCREIGIKELTFYGFTQDNTKR 64
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS--LDDDILCVLKEAEDQTRLNT 128
P + K +K L+K + + VIGN S ++L K + R+ +
Sbjct: 65 PSVQTEAFKKACIDAVK----MLEKEDANLLVIGNYNSPMFPQELLPYCK----RKRIGS 116
Query: 129 G-LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
G + + NY + +++ A+K + SG + I + + ++ DLIIR
Sbjct: 117 GKMKVNFLVNYGWQWDLNNALKAL----SSG-------EKRDILDLISSKEISRIDLIIR 165
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GG +RLS FL Q YS+F I +YWPDF + F+ AL Y+ +D GG
Sbjct: 166 WGGRRRLSGFLPVQSIYSDFYVIDDYWPDFKPQHFYDALEWYSKQDITLGG 216
>gi|151946396|gb|EDN64618.1| cis-prenyltransferase [Saccharomyces cerevisiae YJM789]
Length = 286
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 113/217 (52%), Gaps = 11/217 (5%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S+ P H+G IMDGN R+A + + GH G + I+ E G+ T+FAFSI
Sbjct: 28 SNCVPRHVGFIMDGNRRFARKKEMDVKEGHEAGFVSMSRILELCYEAGVDTATVFAFSIE 87
Query: 67 NWRRPVSEISELVKL----IKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
N++R E+ L+ L I+ ++G + K +++++IG+ LD +L ++ A +
Sbjct: 88 NFKRSSREVESLMTLARERIRQITERGELAC-KYGVRIKIIGDLSLLDKSLLEDVRVAVE 146
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T+ N L I F Y+ R+EI AIK + G+ + S + +L T+ VP
Sbjct: 147 TTKNNKRATLNICFPYTGREEILHAIKETIVQHKKGAA----IGESTLESHLYTAGVPPL 202
Query: 183 DLIIRTGGEKRLSDFLLWQVAYS--EFVFIPEYWPDF 217
DL+IRT G RLSDFL+WQ + + WP+F
Sbjct: 203 DLLIRTSGVSRLSDFLIWQASSKGVRIELLDCLWPEF 239
>gi|18148934|dbj|BAB83522.1| cis-prenyltransferase [Hevea brasiliensis]
Length = 284
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 115/232 (49%), Gaps = 23/232 (9%)
Query: 4 SMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
S+++ P P HI I+DGNGR+A LP GH+ G ++ E+G+K TI+A
Sbjct: 25 SILTQGPIPTHIAFILDGNGRFAKKHKLPEGGGHKAGFLALLNVLTYCYELGVKYATIYA 84
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKE 119
FSI+N+RR E+ ++ L+ ++ + +I VR +GN LD+ + +
Sbjct: 85 FSIDNFRRKPHEVQYVMNLMLEKIEGMIMEESIINAYDICVRFVGNLKLLDEPLKTAADK 144
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD-IESGSVCSHD-------------- 164
T N+ L +A Y+S DEI A++ +D ++S +C+
Sbjct: 145 IMRATAKNSKFVLLLAVCYTSTDEIVHAVEESSKDKLKSDEICNDGNGDCVIKIEEMEPY 204
Query: 165 VDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQ----VAYSEFVFIPE 212
+ L+ +T P PD++IRT GE RLS++LLWQ + YS PE
Sbjct: 205 SEIKLVELERNTYINPYPDVLIRTSGETRLSNYLLWQTTNCILYSPHALWPE 256
>gi|145484001|ref|XP_001428023.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124395106|emb|CAK60625.1| unnamed protein product [Paramecium tetraurelia]
Length = 238
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 121/213 (56%), Gaps = 13/213 (6%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+G+IMDGN R+A R + GH +G + F ++ + ++GI+ +++FAFSI N+ R
Sbjct: 18 PNHVGVIMDGNRRYARQRRIESTEGHIQGYQSFLNLLQWSQKLGIREISVFAFSIENYNR 77
Query: 71 PVSEISELVKLIKS---FLKKGFYSLKKNNIKVRVIGNRLSLDDDILC-VLKEAEDQTRL 126
E+ L++L+K L+ + KN + + G+ L D L L+E E+ +
Sbjct: 78 QKEEVQFLMQLMKQKIHHLQHDLNFIDKNQVNFKCCGDLDFLQDQELKEKLQELENYSSK 137
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
+ L + F+Y+ +E+ +AI+++ + + S + +++S L+ + PD+++
Sbjct: 138 YSQYKLNLCFSYNFTNELDKAIQSMPKGL-SKNEFFQNLNSHLMV-------LNSPDILL 189
Query: 187 RTGGEKRLSDFLLWQVAYSEFV-FIPEYWPDFS 218
RT GE RLS+FLL+Q+ + FI + WP+ S
Sbjct: 190 RTSGETRLSNFLLYQIREKTVIHFIDKKWPELS 222
>gi|300856706|ref|YP_003781690.1| undecaprenyl pyrophosphate synthase [Clostridium ljungdahlii DSM
13528]
gi|300436821|gb|ADK16588.1| undecaprenyl pyrophosphate synthase [Clostridium ljungdahlii DSM
13528]
Length = 214
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 114/230 (49%), Gaps = 21/230 (9%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HIGII DGN RWA RGL + G+ G++ E+ ++GI LT + F+ +N +R
Sbjct: 4 PNHIGIIPDGNRRWAVKRGLSKEKGYSFGLKPGIELFKLCEKLGINELTYYGFTTDNTKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS--LDDDILCVLKEAEDQTRLNT 128
P + K +K L K N + V+GN S ++L + +D +
Sbjct: 64 PSIQAKAFTKACIEAVK----ILSKENASLLVVGNSESPMFPKELLPYMVR-KDFGKGGI 118
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+N + NY ++ + KN+ + H + SSL ++ D+ DLIIR
Sbjct: 119 KVNFLV--NYGWEWDLGKT-KNL------STTNRHSIISSL-----NSHDISRVDLIIRW 164
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GG +RLS FL Q YS+F I +YWPDF E HAL YN +D GG
Sbjct: 165 GGRRRLSGFLPVQSVYSDFYIIDDYWPDFKMEHLIHALKWYNDQDITLGG 214
>gi|145520405|ref|XP_001446058.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124413535|emb|CAK78661.1| unnamed protein product [Paramecium tetraurelia]
Length = 238
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 118/213 (55%), Gaps = 13/213 (6%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+G+IMDGN R+A R + GH +G + F ++ + ++GIK +++FAFSI N+ R
Sbjct: 18 PNHVGVIMDGNRRYAKQRRIEPTEGHIQGYQSFLNLLEWSQKLGIKEISVFAFSIENYNR 77
Query: 71 PVSEISELVKLIKS---FLKKGFYSLKKNNIKVRVIGNRLSLDDDIL-CVLKEAEDQTRL 126
E+ L++L+K L+ + +N ++V+ G+ L D L L E E +
Sbjct: 78 QRDEVQFLMELMKQKMHHLQHDLNFIDQNQVRVKCCGDLDILQDQELKSKLLELETYSSK 137
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
+ L I F+Y+ +E+ +AI+++ + + L + + T+ PD+++
Sbjct: 138 YSQYKLNICFSYNFTNELEKAIQSM-----PKGLTKQEFFQQLSSHLMVTN---SPDILL 189
Query: 187 RTGGEKRLSDFLLWQVAYSEFV-FIPEYWPDFS 218
RT GE RLS+FLL+Q+ + + FI + WP+ S
Sbjct: 190 RTSGETRLSNFLLYQIRENTVIHFIDKKWPELS 222
>gi|15894711|ref|NP_348060.1| undecaprenyl pyrophosphate synthase related enzyme [Clostridium
acetobutylicum ATCC 824]
gi|15024373|gb|AAK79400.1|AE007654_9 Undecaprenyl pyrophosphate synthase related enzyme [Clostridium
acetobutylicum ATCC 824]
gi|325508849|gb|ADZ20485.1| Undecaprenyl pyrophosphate synthase related enzyme [Clostridium
acetobutylicum EA 2018]
Length = 213
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 119/230 (51%), Gaps = 22/230 (9%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HIGII DGN RWA ++G+ + G+ GI +++ +VGIK +T + F+++N +R
Sbjct: 4 PNHIGIIPDGNRRWAVSKGMSKEEGYNPGISPGLQLLRLCKQVGIKEVTYYGFTVDNTKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILC--VLKEAEDQTRLNT 128
P ++ K + K N + V+GN S D+ +L + ++ +
Sbjct: 64 PKNQRLAFTDA----CIKAVDVISKENASLLVVGNTES---DMFPKELLPYTKRKSFGDG 116
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
G+ + NY ++++ I+ G S V S Y+++S + DLIIR
Sbjct: 117 GIKVNFLVNYGWEWDLNK--------IKEGEKSSKKVVS-----YINSSYISRVDLIIRW 163
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GG +RLS FL Q YS+F + +YWPDF E FF AL+ Y+ +D GG
Sbjct: 164 GGRRRLSGFLPVQSIYSDFYVVDDYWPDFKPEHFFDALDWYSKQDITLGG 213
>gi|326469492|gb|EGD93501.1| hypothetical protein TESG_01045 [Trichophyton tonsurans CBS 112818]
gi|326484399|gb|EGE08409.1| dehydrodolichyl diphosphate synthase [Trichophyton equinum CBS
127.97]
Length = 304
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 122/229 (53%), Gaps = 3/229 (1%)
Query: 1 MVASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
++ S++ P P H+ II DGN RWA + + GH+ G + I+ + G++ +T
Sbjct: 19 LLMSIVQQGPVPKHVAIIADGNRRWAKSHEINIKRGHQIGAMTMHNILDLFFDTGVECVT 78
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFY-SLKKNNIKVRVIGNRLSLDDDILCVLK 118
++ FSI N++RP ++ +L+ L + +++ K I+ + +G L + I ++K
Sbjct: 79 VYLFSIENFKRPKDQVDDLMDLSEIWIRWHLSPPPNKRKIRFQFLGRLELLPEKIRKLIK 138
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
E ++T + F+Y+SRDE++RAI+ ++ + ++ + I +DT +
Sbjct: 139 ELVEKTADYDEGTFNVCFSYTSRDEMARAIEMTVRNHNNSPENGGNITAETIDNNMDTFN 198
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPE-YWPDFSRELFFHAL 226
P D++IRT G RLSDFLLWQ + + + +WP+F F A+
Sbjct: 199 DPPLDVLIRTSGVNRLSDFLLWQCHRDTIIEVLDIHWPEFRYWHLFRAV 247
>gi|299472389|emb|CBN77577.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 148
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 78/130 (60%)
Query: 108 SLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDS 167
L + +L +++AED TR TG I +Y +R E++ A + I Q++ SG VD
Sbjct: 18 QLPERVLSAIQKAEDATRDCTGFLFNICLSYGARQEMANACRQIAQEVASGVTSLDLVDE 77
Query: 168 SLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALN 227
+ ++L T +PDPDL+IRT GEKR+S+FLL+Q+AY+E F+ + WPD +R
Sbjct: 78 CAVERHLLTKGLPDPDLLIRTSGEKRVSNFLLFQMAYTELFFVDKLWPDITRRDVLDIFE 137
Query: 228 QYNLRDRRFG 237
+ R RRFG
Sbjct: 138 AFKTRKRRFG 147
>gi|68304118|gb|AAY89717.1| YaeS [Escherichia coli LW1655F+]
Length = 161
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 89/148 (60%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++AFS NW RP
Sbjct: 11 HVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPA 70
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+S L++L L SL ++N+++R+IG+ + + ++++E T NTGL L
Sbjct: 71 QEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTL 130
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSV 160
IA NY R +I + ++ + + ++ G++
Sbjct: 131 NIAANYGGRWDIVQGVRQLAEKVQQGNL 158
>gi|322782795|gb|EFZ10595.1| hypothetical protein SINV_80008 [Solenopsis invicta]
Length = 437
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 110/208 (52%), Gaps = 14/208 (6%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRK-----------GIEVFNEIVAAAAEVGIKNLT 59
P H+ IIMDGN R+A + R GH K G I+ ++GI +T
Sbjct: 129 PRHVTIIMDGNRRYAKKEKILRNEGHIKEYVSLKSEFARGFNNLLRIILLCKDLGIVEIT 188
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++ FSI+N++ E+ +++ +IK F + L + +RVIGN L +D+L +
Sbjct: 189 VYIFSIDNFKCTKEEVDDIMNIIKRFFE-DINELADVGVCIRVIGNLSFLREDVLKSIAR 247
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV 179
A ++ N L L +A +Y+SRDE++ AIK I + D+ +LI+ L T
Sbjct: 248 AIITSKDNNKLILNLACSYTSRDELTHAIKEIAMGTMHNDILREDITENLISDCLYTYKS 307
Query: 180 PDPDLIIRTGGEKRL--SDFLLWQVAYS 205
+PDL+IRT GE RL S+FL+WQ ++
Sbjct: 308 SNPDLLIRTSGEVRLIVSNFLMWQYFHA 335
>gi|207347805|gb|EDZ73867.1| YBR002Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 284
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 113/217 (52%), Gaps = 11/217 (5%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S+ P H+G IMDGN R+A + + GH G + I+ E G+ T+FAFSI
Sbjct: 28 SNCVPRHVGFIMDGNRRFARKKEMDVKEGHEAGFVSMSRILELCYEAGVDTATVFAFSIE 87
Query: 67 NWRRPVSEISELVKL----IKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
N++R E+ L+ L I+ ++G + K +++++IG+ LD +L ++ A +
Sbjct: 88 NFKRSSREVESLMTLARERIRQITERGELAC-KYGVRIKIIGDLSLLDKSLLEDVRVAVE 146
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T+ N L I F Y+ R+EI A+K + G+ + S + +L T+ VP
Sbjct: 147 TTKNNKRATLNICFPYTGREEILHAMKETIVQHKKGAA----IGESTLESHLYTAGVPPL 202
Query: 183 DLIIRTGGEKRLSDFLLWQVAYS--EFVFIPEYWPDF 217
DL+IRT G RLSDFL+WQ + + WP+F
Sbjct: 203 DLLIRTSGVSRLSDFLIWQASSKGVRIELLDCLWPEF 239
>gi|302504363|ref|XP_003014140.1| hypothetical protein ARB_07445 [Arthroderma benhamiae CBS 112371]
gi|291177708|gb|EFE33500.1| hypothetical protein ARB_07445 [Arthroderma benhamiae CBS 112371]
Length = 306
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 124/225 (55%), Gaps = 14/225 (6%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI II DGN RWA + + GH+ G + ++I+ + G++ +T + FSI N++R
Sbjct: 30 PKHIAIIADGNRRWAKSSEINVKRGHQMGAKNLDDILDLFFDTGVECVTAYLFSIENFKR 89
Query: 71 PVSEISELVKLIKSFLKKGF-YSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
P ++ +L+ + + +++K S K I+ RV+G L + I ++K+ ++T
Sbjct: 90 PKEQVDDLMDISEIWVQKYLSRSPNKRKIRFRVLGRLELLPEKIRKLIKKLVEKTADYDE 149
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDI-------ESGSVCSHDVDSSLIAKYLDTSDVPDP 182
L + F+Y+SRDE++RAI+ ++ E G++ + +D++ +D + P
Sbjct: 150 GTLNVCFSYTSRDEMARAIEMTVRNHNDSPKNGERGNITAETIDNN-----MDICNDPPL 204
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPE-YWPDFSRELFFHAL 226
D++IRT G RLSDFLLWQ + + + +WP+F F A+
Sbjct: 205 DVLIRTSGVCRLSDFLLWQCHRDTVIEVLDIHWPEFRYWHLFLAV 249
>gi|50291875|ref|XP_448370.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527682|emb|CAG61331.1| unnamed protein product [Candida glabrata]
Length = 342
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 117/227 (51%), Gaps = 11/227 (4%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ + P H+ IMDGN R+A ++ +P GH G E +V +G+K ++
Sbjct: 55 LIFALRTGPVPAHVAFIMDGNRRFAKSKDIPLRKGHEAGGETLLTLVYICKTLGVKCISA 114
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIK-------VRVIGNRLSLDDDI 113
+AFSI N+ RP E+ L+ L L + ++ K N+ K +R++G+R + ++
Sbjct: 115 YAFSIENFNRPREEVETLMNLFGDKLDE--FAQKANDYKDPLYGSSLRIVGDRSLISPEL 172
Query: 114 LCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKY 173
++ E T + L+I F Y+SR++I + + + ++ ++ + K
Sbjct: 173 RERIENVEKLTENSEKFILYICFPYTSRNDIFQTVTKVTDKYVQSNIIDSNLSINEFTKS 232
Query: 174 LDTSDVPD-PDLIIRTGGEKRLSDFLLWQV-AYSEFVFIPEYWPDFS 218
+ + D D++IRT G KRLSDF+LWQV ++ F WP F+
Sbjct: 233 MHFKEYSDNCDILIRTSGHKRLSDFMLWQVNEHATMEFSTSLWPQFN 279
>gi|225437860|ref|XP_002263977.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 290
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 127/251 (50%), Gaps = 30/251 (11%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ S++S P P+HI IMDGN R+A + L AGH+ G ++ + E+G+K +TI
Sbjct: 24 IFSVLSVGPIPNHIAFIMDGNRRFAKKQNLIEGAGHKVGYLALMSMLRYSYELGVKYVTI 83
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ ++ L++ +++ L ++V IGN L +
Sbjct: 84 YAFSIENFKRRPEEVQSVMDLMQEKIEQLINEESILNHFGVRVHFIGNLKLLSAPVRLAA 143
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIK--------NIFQDIESGSVC-------- 161
+ A T N+ L I Y+S +EI A++ I + SG C
Sbjct: 144 ERAMLVTACNSKAVLSICVAYTSTNEIMHAVEESCVKKWDEIRELKASGVDCGLTKLEGY 203
Query: 162 ----SHD-VDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPE-YWP 215
+ D ++ + I K+L + PDPD++IRT GE RLS+FLLWQ Y +++ P WP
Sbjct: 204 EKGEAQDLINLTDIEKHLYMAVAPDPDILIRTSGETRLSNFLLWQSQYC-YLYSPSVLWP 262
Query: 216 DFSRELFFHAL 226
+ F+H L
Sbjct: 263 EIG---FWHLL 270
>gi|190408826|gb|EDV12091.1| cis-prenyltransferase [Saccharomyces cerevisiae RM11-1a]
gi|256273182|gb|EEU08131.1| Rer2p [Saccharomyces cerevisiae JAY291]
gi|259144848|emb|CAY77787.1| Rer2p [Saccharomyces cerevisiae EC1118]
gi|323310185|gb|EGA63377.1| Rer2p [Saccharomyces cerevisiae FostersO]
gi|323338818|gb|EGA80033.1| Rer2p [Saccharomyces cerevisiae Vin13]
gi|323349820|gb|EGA84034.1| Rer2p [Saccharomyces cerevisiae Lalvin QA23]
Length = 286
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 113/217 (52%), Gaps = 11/217 (5%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S+ P H+G IMDGN R+A + + GH G + I+ E G+ T+FAFSI
Sbjct: 28 SNCVPRHVGFIMDGNRRFARKKEMDVKEGHEAGFVSMSRILELCYEAGVDTATVFAFSIE 87
Query: 67 NWRRPVSEISELVKL----IKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
N++R E+ L+ L I+ ++G + K +++++IG+ LD +L ++ A +
Sbjct: 88 NFKRSSREVESLMTLARERIRQITERGELAC-KYGVRIKIIGDLSLLDKSLLEDVRVAVE 146
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T+ N L I F Y+ R+EI A+K + G+ + S + +L T+ VP
Sbjct: 147 TTKNNKRATLNICFPYTGREEILHAMKETIVQHKKGAA----IGESTLESHLYTAGVPPL 202
Query: 183 DLIIRTGGEKRLSDFLLWQVAYS--EFVFIPEYWPDF 217
DL+IRT G RLSDFL+WQ + + WP+F
Sbjct: 203 DLLIRTSGVSRLSDFLIWQASSKGVRIELLDCLWPEF 239
>gi|220932284|ref|YP_002509192.1| Di-trans-poly-cis-decaprenylcistransferase [Halothermothrix orenii
H 168]
gi|219993594|gb|ACL70197.1| Di-trans-poly-cis-decaprenylcistransferase [Halothermothrix orenii
H 168]
Length = 214
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 115/230 (50%), Gaps = 21/230 (9%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
PDHIG+I DGN RWA + GL R G+ G++ E+ +VG+K LT + F+++N +R
Sbjct: 4 PDHIGVIPDGNRRWALSHGLTREKGYASGLKPGLEVFKLCKKVGVKELTFYGFTMDNTKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS--LDDDILCVLKEAEDQTRLNT 128
P ++ K ++ L + + + V+GN S ++L ++ +
Sbjct: 64 PSTQTEAFTKACIDAVE----MLSREDASLLVVGNTESPKFPRELLKYTRKRHKFGKGGL 119
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+N + + + D+ + V S + KYL++SD+ DLIIR
Sbjct: 120 KVNFLVNYGWH-------------WDLYNLKQKK--VKKSKLQKYLNSSDISRVDLIIRW 164
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GG +RLS FL Q Y++F I +YWPDF E F+ AL Y+ +D GG
Sbjct: 165 GGRRRLSGFLPVQSIYADFYVIDDYWPDFKPEHFYEALAWYDKQDITLGG 214
>gi|62318659|dbj|BAD95141.1| dehydrodolichyl diphosphate synthase - like protein [Arabidopsis
thaliana]
Length = 146
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 82/134 (61%), Gaps = 2/134 (1%)
Query: 98 IKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIES 157
IK+ VIGNR L + +L +++E E+ T+ G NL IA +YS R +I +A K++ ++
Sbjct: 2 IKISVIGNRTKLPESLLGLIEEVEEATKSYEGKNLIIAIDYSGRYDILQACKSLANKVKD 61
Query: 158 GSVCSHDVDSSLIAKYLDT--SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWP 215
G + D++ + K L T S+ P+PDL+IRT GE+R+S+F LWQ AY+E F WP
Sbjct: 62 GLIQVEDINEKAMEKELLTKCSEFPNPDLLIRTSGEQRISNFFLWQSAYTELYFPTVLWP 121
Query: 216 DFSRELFFHALNQY 229
DF + AL Y
Sbjct: 122 DFGEAEYLEALTWY 135
>gi|86475811|dbj|BAE78988.1| Probable short-chain Z-isoprenyl diphosphate synthase [Streptomyces
sp. KO-3988]
Length = 282
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 122/254 (48%), Gaps = 32/254 (12%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGH---RKGIEVFNEIVAAAAEVG--- 54
+A + P P H+ +++DGN RWA R AGH R+G V A+VG
Sbjct: 42 LARKLEGRPRPRHVAVMLDGNRRWA------RGAGHDDVREGYRV------GGAKVGDFL 89
Query: 55 -------IKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRL 107
I+++T++ S +N P +E+ L+++I+ + + ++ VIG
Sbjct: 90 RWCDASDIEHVTLWMLSDDNLSAPPAELGPLLEIIEETVAS--ICAADEDWQIEVIGALD 147
Query: 108 SLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGS----VCSH 163
L + LK+A +T +GL + +A Y R E+ A+K+ F +G +
Sbjct: 148 LLPGETARTLKDAVARTTGRSGLKVDVAVGYGGRREVVDAVKSAFDKHIAGGGDPRELAE 207
Query: 164 DVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFF 223
+ D I L + D D IIRT GE+RLS FLLWQ AY+E F+ WP F +
Sbjct: 208 NFDLQHITDNLYSPAGHDTDFIIRTSGEQRLSGFLLWQSAYAEVHFVEVLWPAFRQIDLL 267
Query: 224 HALNQYNLRDRRFG 237
AL Y RDRR+G
Sbjct: 268 RALRSYADRDRRYG 281
>gi|291001823|ref|XP_002683478.1| predicted protein [Naegleria gruberi]
gi|284097107|gb|EFC50734.1| predicted protein [Naegleria gruberi]
Length = 241
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 114/239 (47%), Gaps = 21/239 (8%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IMDGN R+A + +P GHR G + + + +G+K +T++AFSI+N++R
Sbjct: 4 PQHIAFIMDGNRRYATKKNIPIKEGHRSGYKKLKQCLNWCEMLGVKTVTVYAFSIDNFKR 63
Query: 71 PVSEISELVKLI----KSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
E+ ++ L+ K + K + K + +RV+G+ + + A D +
Sbjct: 64 DKQEVDNIMDLMDRRFKDMVTKKKSFIIKYKVILRVLGDFNRFPQYVQDSAQRAMDYSYK 123
Query: 127 ------NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSH---------DVDSSLIA 171
N L L + Y+S EI AI N D S S+ + ++ L+
Sbjct: 124 INSKYGNDALILNLCCPYTSTYEIENAITNYISDKISNKDLSNEEKKKSIVIEEETKLLD 183
Query: 172 KYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
KY T+ +PD+I+RT GE RLSDFL WQ S YWP+FS + QY
Sbjct: 184 KYFLTT--SEPDIIVRTSGEMRLSDFLTWQCEKSMIYISSLYWPEFSFWQLVSVILQYQ 240
>gi|71027595|ref|XP_763441.1| undecaprenyl diphosphate synthase [Theileria parva strain Muguga]
gi|68350394|gb|EAN31158.1| undecaprenyl diphosphate synthase, putative [Theileria parva]
Length = 267
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 122/229 (53%), Gaps = 14/229 (6%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
MV M +H+ +IMDGN R+A L + GH G EI+ ++ G+K +TI
Sbjct: 10 MVFVMKPMLRVEHMALIMDGNRRYAKNLNLQQSQGHLNGFNKLLEILEFSSLFGLKVITI 69
Query: 61 FAFSINNWRRPVSEISELVKLI------KSFLKKGFYSLKKNNIKVRVIGNRLSLDDDIL 114
FAFS+ N+ R EIS+L+ L KS L++ ++ K+R G+ L +DI
Sbjct: 70 FAFSLLNFSRTRKEISDLLNLFVDLSGPKSQLEE---LCERIGCKIRFCGDFSFLGEDIK 126
Query: 115 CVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----I 170
+L + + +T + + L + +Y R+EI A+ ++E+ + + D ++
Sbjct: 127 QILNDIQSKTNHYSKMTLNVCASYGGRNEIINALNKFNSNVENNTTFNTDNTNNNAREEY 186
Query: 171 AKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVA-YSEFVFIPEYWPDFS 218
+ L T D P+L+IRT GE RLSDFL++Q + ++ F F+ E WP+ S
Sbjct: 187 YRNLYTGDFTPPNLLIRTSGESRLSDFLIYQCSEHTCFYFVKEMWPELS 235
>gi|56292027|emb|CAI29179.1| cis-isopentenyltransferase [Trypanosoma brucei brucei]
Length = 419
Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 132/293 (45%), Gaps = 58/293 (19%)
Query: 3 ASMMSSSPPDH----IGIIMDGNGRWAAARGL---------------------------- 30
+S +++P DH + +IMDGN R+ +
Sbjct: 126 SSRAATTPHDHNVKHLAVIMDGNRRYGQRHSVETVCVKELEDVCEFIFNEDMPLFGVETN 185
Query: 31 ----------PRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVK 80
+ GHR G E E V + I LT++AFS NW RP E+ L+
Sbjct: 186 FKRLAFLLKRTKLDGHRVGGEKLLEFVKDCIDFNISMLTVYAFSTENWSRPALEVKVLMT 245
Query: 81 LIKSFLKKGFYSLKKNNIKVRVIGNRLSL-DDDILCVLKEAEDQTRLNTGLNLFI--AFN 137
L + ++ + +K I +R I + I ++ + E++TR + + + +
Sbjct: 246 LFYCYFERMRQTARKQGIFIRFISPAFEMIPSRIRRIMVDIEEETRRHVPRRIVVNVCVS 305
Query: 138 YSSRDEISRAIKNIFQD------IESGSVCSHDVDSSLIAKYL--DTSDVPD-----PDL 184
YS RDEI A + Q I +G + S + S A + D S + D P +
Sbjct: 306 YSGRDEIINACNGLLQKRSEYSPISTGDLMSQMLRSVTQADHEEEDASVLFDGGGAEPQI 365
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
++RT GE+RLS+FLL++ AY+EF+F+ + WP+ +RE L ++ RD+R+G
Sbjct: 366 LLRTSGEQRLSNFLLFECAYTEFLFVDKTWPEINREDLVKLLQDHDKRDKRYG 418
>gi|147774323|emb|CAN61413.1| hypothetical protein VITISV_029565 [Vitis vinifera]
Length = 384
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 127/251 (50%), Gaps = 30/251 (11%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ S++S P P+HI IMDGN R+A + L AGH+ G ++ + E+G+K +TI
Sbjct: 118 IFSVLSVGPIPNHIAFIMDGNRRFAKKQNLIEGAGHKVGYLALMSMLRYSYELGVKYVTI 177
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ ++ L++ +++ L ++V IGN L +
Sbjct: 178 YAFSIENFKRRPEEVQSVMDLMQEKIEQLINEESILNHFGVRVHFIGNLKLLSAPVRLAA 237
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIK--------NIFQDIESGSVC-------- 161
+ A T N+ L I Y+S +EI A++ I + SG C
Sbjct: 238 ERAMLVTACNSKAVLSICVAYTSTNEIMHAVEESCVKKWDEIRELNASGVDCGLTKLEGY 297
Query: 162 ----SHD-VDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPE-YWP 215
+ D ++ + I K+L + PDPD++IRT GE RLS+FLLWQ Y +++ P WP
Sbjct: 298 EKGEAQDLINLTDIEKHLYMAVAPDPDILIRTSGETRLSNFLLWQSQYC-YLYSPSVLWP 356
Query: 216 DFSRELFFHAL 226
+ F+H L
Sbjct: 357 EIG---FWHLL 364
>gi|72391834|ref|XP_846211.1| cis-prenyltransferase-like protein [Trypanosoma brucei TREU927]
gi|62358365|gb|AAX78829.1| cis-prenyltransferase-like protein [Trypanosoma brucei]
gi|70802747|gb|AAZ12652.1| cis-prenyltransferase-like protein [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 419
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 132/293 (45%), Gaps = 58/293 (19%)
Query: 3 ASMMSSSPPDH----IGIIMDGNGRWAAARGL---------------------------- 30
+S +++P DH + +IMDGN R+ +
Sbjct: 126 SSRAATTPHDHNVKHLAVIMDGNRRYGQRHSVETVCVKELEDVCEFIFNEDMPLFGVEPI 185
Query: 31 ----------PRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVK 80
+ GHR G E E V + I LT++AFS NW RP E+ L+
Sbjct: 186 FKRLAFLLKRTKLDGHRVGGEKLLEFVKDCIDFNISMLTVYAFSTENWSRPALEVKVLMT 245
Query: 81 LIKSFLKKGFYSLKKNNIKVRVIGNRLSL-DDDILCVLKEAEDQTRLNTGLNLFI--AFN 137
L + ++ + +K I +R I + I ++ + E++TR + + + +
Sbjct: 246 LFYCYFERMRQTARKQGIFIRFISPAFEMIPSRIRRIMVDIEEETRRHVPRRIVVNVCVS 305
Query: 138 YSSRDEISRAIKNIFQD------IESGSVCSHDVDSSLIAKYL--DTSDVPD-----PDL 184
YS RDEI A + Q I +G + S + S A + D S + D P +
Sbjct: 306 YSGRDEIINACNGLLQKRSEYSPISTGDLMSQMLRSVTQADHEEEDASVLFDGGGAEPQI 365
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
++RT GE+RLS+FLL++ AY+EF+F+ + WP+ +RE L ++ RD+R+G
Sbjct: 366 LLRTSGEQRLSNFLLFECAYTEFLFVDKTWPEINREDLVKLLQDHDKRDKRYG 418
>gi|326480880|gb|EGE04890.1| prenyltransferase [Trichophyton equinum CBS 127.97]
Length = 292
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 121/241 (50%), Gaps = 21/241 (8%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ +MDGN R+A +G+ R GH G E +I+ GIK +TI
Sbjct: 31 LIGALRQGPIPQHVAFVMDGNRRFARNQGIERVEGHNLGFEALAKILEVCYSSGIKVVTI 90
Query: 61 FAFSINNWRRPVSEISELVKLIK-SFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+++ K L+ + L++ VRV+G R + D+L
Sbjct: 91 YAFSIENFKRSKYEVDALMEMAKLKLLQLSEHGELLERYGASVRVLGRRDQIRPDVL--- 147
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
EA D+T T N N D++ +F E+ + + ++ ++ T+
Sbjct: 148 -EAVDRTVELTSGNGDAILNICFPDQL------LFHSPET-------ITTQTLSDHMLTA 193
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
P D++IRT G +RLSDF+LWQ ++ VF+ WP FS F + + R R+
Sbjct: 194 GCPPLDILIRTSGVERLSDFMLWQCHQDTQIVFLDTLWPAFSLWEFLPVIWDWQRRIRKT 253
Query: 237 G 237
G
Sbjct: 254 G 254
>gi|261329812|emb|CBH12794.1| cis-prenyltransferase-like protein, putative [Trypanosoma brucei
gambiense DAL972]
Length = 419
Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 132/293 (45%), Gaps = 58/293 (19%)
Query: 3 ASMMSSSPPDH----IGIIMDGNGRWAAARGL---------------------------- 30
+S +++P DH + +IMDGN R+ +
Sbjct: 126 SSRAATTPHDHNVKHLAVIMDGNRRYGQRHSVETVCVKELEDVCEFIFNEDMPLFGVEPI 185
Query: 31 ----------PRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVK 80
+ GHR G E E V + I LT++AFS NW RP E+ L+
Sbjct: 186 FKRLAFLLKRTKLDGHRVGGEKLLEFVKDCIDFNISMLTVYAFSTENWSRPALEVKVLMT 245
Query: 81 LIKSFLKKGFYSLKKNNIKVRVIGNRLSL-DDDILCVLKEAEDQTRLNTGLNLFI--AFN 137
L + ++ + +K I +R I + I ++ + E++TR + + + +
Sbjct: 246 LFYCYFERMRQTARKQGIFIRFISPAFEMIPSRIRRIMVDIEEETRRHVPRRIVVNVCVS 305
Query: 138 YSSRDEISRAIKNIFQD------IESGSVCSHDVDSSLIAKYL--DTSDVPD-----PDL 184
YS RDEI A + Q I +G + S + S A + D S + D P +
Sbjct: 306 YSGRDEIINACNGLLQKRNEYSPISTGDLMSQMLRSVTQADHEEEDASVLFDGGGAEPQI 365
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
++RT GE+RLS+FLL++ AY+EF+F+ + WP+ +RE L ++ RD+R+G
Sbjct: 366 LLRTSGEQRLSNFLLFECAYTEFLFVDKTWPEINREDLVKLLQYHDKRDKRYG 418
>gi|323306066|gb|EGA59800.1| Rer2p [Saccharomyces cerevisiae FostersB]
Length = 258
Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 112/217 (51%), Gaps = 11/217 (5%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S+ P H+G IMDGN R+A + + GH G + I+ E G+ T+FAFSI
Sbjct: 28 SNCVPRHVGFIMDGNRRFARKKEMDVKEGHEAGFVSMSRILELCYEAGVDTATVFAFSIE 87
Query: 67 NWRRPVSEISELVKL----IKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
N++R E+ L+ L I+ ++G + K +++++IG+ LD +L ++ A +
Sbjct: 88 NFKRSSREVESLMTLARERIRQITERGELAC-KYGVRIKIIGDLSLLDKSLLEDVRVAVE 146
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T+ N L I F Y+ R+EI A K + G+ + S + +L T+ VP
Sbjct: 147 TTKNNKRATLNICFPYTGREEILHAXKETIVQHKKGAA----IGESTLESHLYTAGVPPL 202
Query: 183 DLIIRTGGEKRLSDFLLWQVAYS--EFVFIPEYWPDF 217
DL+IRT G RLSDFL+WQ + + WP+F
Sbjct: 203 DLLIRTSGVSRLSDFLIWQASSKGVRIELLDCLWPEF 239
>gi|28572591|ref|NP_789371.1| undecaprenyl pyrophosphate synthetase [Tropheryma whipplei TW08/27]
gi|42559960|sp|Q83HR7|UPPS1_TROW8 RecName: Full=Undecaprenyl pyrophosphate synthase 1; Short=UPP
synthase 1; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase 1;
AltName: Full=Undecaprenyl diphosphate synthase 1;
Short=UDS 1
gi|28410723|emb|CAD67109.1| undecaprenyl pyrophosphate synthetase [Tropheryma whipplei TW08/27]
Length = 258
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 121/234 (51%), Gaps = 12/234 (5%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ +I+DGN RWA R + GHR G + + E+ I +T++ S +N +
Sbjct: 31 PGHVALIVDGNRRWARKEKRDRISDGHRAGAGKAVDFLHWCDELDINIVTLYLLSNDNLK 90
Query: 70 -RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
R E+++LV++I + + + K N++ G+ +L + + L+ + T+ N
Sbjct: 91 NRNRQELNDLVQVICNLIAQVSKRWKVNHV-----GSCENLPELLGNSLEGVKSSTKTNR 145
Query: 129 ----GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ + +A YS R EI+ A++ I G + + +I+ L T + DPDL
Sbjct: 146 YSERSMTVNLAIGYSGRAEITEAVRKIVNTYPIGDL-PEKITEEVISANLYTGGLSDPDL 204
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
IIRT GE+RLSDF+ WQ +SEF F+ PD + F A+ +++R R FG
Sbjct: 205 IIRTSGEQRLSDFMPWQSTHSEFYFLEALGPDLRKVDFLRAIRDFSIRRRSFGA 258
>gi|153955945|ref|YP_001396710.1| UppS2 [Clostridium kluyveri DSM 555]
gi|219856287|ref|YP_002473409.1| hypothetical protein CKR_2944 [Clostridium kluyveri NBRC 12016]
gi|146348803|gb|EDK35339.1| UppS2 [Clostridium kluyveri DSM 555]
gi|219570011|dbj|BAH07995.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 214
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 111/232 (47%), Gaps = 21/232 (9%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P HIGII DGN RWA G+ + G+ G++ E+ ++GIK LT + F+ +N
Sbjct: 2 SMPAHIGIIPDGNRRWALKNGMAKENGYNFGLKPGIELFKLCEKLGIKELTYYGFTTDNT 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDIL--CVLKEAEDQTRL 126
+RP + + +K L K N + V+GN D + +L +
Sbjct: 62 KRPAPQTKAFTRACIEAVK----ILSKENASLLVVGNS---DSPMFPKSLLPYTVRKKFG 114
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
G+ + NY ++S ++KN+ + +C+ L++SD+ DLII
Sbjct: 115 TGGIKINFLVNYGWEWDLS-SVKNLGTTNRTSIMCN-----------LNSSDITRIDLII 162
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q YS+F I +YWPDF E AL Y +D GG
Sbjct: 163 RWGGRRRLSGFLPVQSVYSDFYMIEDYWPDFKPEHLMQALKWYRHQDITLGG 214
>gi|28493298|ref|NP_787459.1| undecaprenyl pyrophosphate synthase [Tropheryma whipplei str.
Twist]
gi|42559957|sp|Q83GG2|UPPS2_TROWT RecName: Full=Undecaprenyl pyrophosphate synthase 2; Short=UPP
synthase 2; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase 2;
AltName: Full=Undecaprenyl diphosphate synthase 2;
Short=UDS 2
gi|28476339|gb|AAO44428.1| undecaprenyl pyrophosphate synthetase [Tropheryma whipplei str.
Twist]
Length = 258
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 120/234 (51%), Gaps = 12/234 (5%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ +I+DGN RWA R + GHR G + + E+ I +T++ S +N +
Sbjct: 31 PGHVALIVDGNRRWARKEKRDRISDGHRAGAGKAVDFLHWCDELDINIVTLYLLSNDNLK 90
Query: 70 -RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
R E+++LV++I + + K N++ G+ +L + + L+ + T+ N
Sbjct: 91 NRNRQELNDLVQVICDLIAQVSKRWKVNHV-----GSCENLPELLGNSLEGVKSSTKTNR 145
Query: 129 ----GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ + +A YS R EI+ A++ I G + + +I+ L T + DPDL
Sbjct: 146 YSERSMTVNLAIGYSGRAEITEAVRKIVNTYPIGDL-PEKITEEVISANLYTGGLSDPDL 204
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
IIRT GE+RLSDF+ WQ +SEF F+ PD + F A+ +++R R FG
Sbjct: 205 IIRTSGEQRLSDFMPWQSTHSEFYFLEALGPDLRKVDFLRAIRDFSIRRRSFGA 258
>gi|302392591|ref|YP_003828411.1| Di-trans-poly-cis-decaprenylcistransferase [Acetohalobium
arabaticum DSM 5501]
gi|302204668|gb|ADL13346.1| Di-trans-poly-cis-decaprenylcistransferase [Acetohalobium
arabaticum DSM 5501]
Length = 215
Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 114/238 (47%), Gaps = 36/238 (15%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
PDHIGII DGN RWA ++GL + G+ G+ +++ EVG+ +T + F+ +N R
Sbjct: 4 PDHIGIIPDGNRRWAESKGLSKEQGYTHGLSPGVKLLRLCKEVGVNEVTYYGFTTDNTER 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS--LDDDILCVLKEAEDQTRLNT 128
P +I+ + ++ L + + VIG+R + D++ +E +
Sbjct: 64 PPKQITAFRQACVDAVEM----LANEDASLLVIGDRQADEFPDELESYTEERQPFGNNEI 119
Query: 129 GLNLFIAFNY-------SSRDEISR-AIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+N + + + S DE+SR +KN L+++ V
Sbjct: 120 KVNFLVNYGWKWDLNSLSQADEVSRRKLKN----------------------QLNSNQVS 157
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DL+IR G +RLS FL Q Y++F + EYWPDF E F+ AL Y+ +D +GG
Sbjct: 158 QVDLVIRWGNRRRLSGFLPVQSVYADFYVVDEYWPDFEPEQFYEALEWYDKQDITYGG 215
>gi|170104577|ref|XP_001883502.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164641566|gb|EDR05826.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 265
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 116/220 (52%), Gaps = 10/220 (4%)
Query: 5 MMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++++ P P H+ +MDGN R+A + GH G ++ + ++ ++ +AF
Sbjct: 26 VLAAGPVPRHVAFVMDGNRRYARRQQKQVQEGHVDGYVALRRMLEVCLRLNVQCVSAYAF 85
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEA 120
SI N++R E+ L+KL + L + L + +++ V+G L + + +++A
Sbjct: 86 SIENFKRSEDEVEALMKLAEEKLLELCEHGDILDEYGVRLNVLGRTSLLPEKVQLAVQKA 145
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQ--DIESGSVCSHDVDSSLIAKYLDTSD 178
E TR NT L + Y+SRDEI+ A+++ + D + + D+D+ L+ L S
Sbjct: 146 ESMTRHNTRAILNLCMPYTSRDEITTAVESCVRNADPSNPQITEKDIDAQLMTS-LGCS- 203
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPE-YWPDF 217
P D+++RT G KRLSDFLLWQ + I +WPDF
Sbjct: 204 -PPLDILVRTSGVKRLSDFLLWQCCEDTQIQISSTFWPDF 242
>gi|187932432|ref|YP_001887098.1| undecaprenyl pyrophosphate synthetase [Clostridium botulinum B str.
Eklund 17B]
gi|187720585|gb|ACD21806.1| undecaprenyl pyrophosphate synthetase [Clostridium botulinum B str.
Eklund 17B]
Length = 213
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 110/230 (47%), Gaps = 22/230 (9%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+I DGN RWA A GL + G+ GI E+ + GI +T + F+++N +R
Sbjct: 4 PKHIGVIPDGNRRWALANGLTKDKGYSFGINPGLEVFKLCQKEGISEVTFYGFTVDNTKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILC--VLKEAEDQTRLNT 128
P + + +K L K N ++ V+GN +D + +L ++ T
Sbjct: 64 PSEQKIAFTEACIESVK----LLTKENCEILVLGN---IDSKLFPKELLPFSKRTTFGTG 116
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
G+ + NY ++ NI ++ +D I Y+ + D+ DLIIR
Sbjct: 117 GIKVNFLMNYGWEWDL-----NILKE--------NDPSHKGIIPYIHSKDISRIDLIIRW 163
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GG +RLS FL Q YS+F I YWP F F+ ALN YN +D GG
Sbjct: 164 GGRRRLSGFLPAQCVYSDFYVIDSYWPAFKEHEFYDALNWYNDQDVTLGG 213
>gi|134110838|ref|XP_775883.1| hypothetical protein CNBD2910 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258549|gb|EAL21236.1| hypothetical protein CNBD2910 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 279
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 116/226 (51%), Gaps = 19/226 (8%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +MDGN R+A G +GH +G + + I+ ++I+AF+I+N+ R
Sbjct: 30 PHHVAFVMDGNRRYARELGQQVESGHAEGFNALRRTLEICLRLRIRAVSIYAFAIDNFSR 89
Query: 71 PVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
E+ L+ L K L + L++ +K+R IG L D+L +++ E T+ N
Sbjct: 90 SEKEVGALMNLAKQRLAELCEHGDLLEEYGVKIRFIGQLDMLPPDVLQAVRDMEAMTQDN 149
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV------DSSLIAKYLDTSD--- 178
L + Y+SRDEI+ A+K + G + D+ DS ++K ++T D
Sbjct: 150 KNGVLNVCCPYASRDEITTAMKESVRRAYEGELAPSDITAKDVFDSLGVSKAINTVDKSL 209
Query: 179 ---VPDP---DLIIRTGGEKRLSDFLLWQVA-YSEFVFIPEYWPDF 217
+P D+++RT KRLSDF++WQ + ++ F+ YWP+F
Sbjct: 210 FVNPEEPEKLDILVRTSDVKRLSDFMMWQASDDTQLHFVKTYWPEF 255
>gi|71005722|ref|XP_757527.1| hypothetical protein UM01380.1 [Ustilago maydis 521]
gi|46096650|gb|EAK81883.1| hypothetical protein UM01380.1 [Ustilago maydis 521]
Length = 357
Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 120/238 (50%), Gaps = 31/238 (13%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEV-GIKNLTIFAFSINNWR 69
P HI +MDGN RWA GH G ++ + G+ +T++AF+I+N+R
Sbjct: 92 PRHIAFVMDGNRRWARTSHHSIQHGHLTGFATLKSVLEVCLNLDGLDTVTVYAFAIDNFR 151
Query: 70 RPVSEISELVKLIKSFLKK--GFYSL-KKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
R +E+S L+++ K+ L + G L + +++VR+ G + L D+ ++ E+ T+
Sbjct: 152 RSEAEVSTLMQIAKTRLIELAGHGELIARYSVRVRIAGRKDLLPADVREAVERMENMTKH 211
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNI----FQDIE---------------SGSVCSH---D 164
NT L I Y+SRDEI+ A + + +E S S H D
Sbjct: 212 NTRATLNICMPYASRDEITGAARTCLDRKLRHVERAAVAAQAQQIAQNNSHSSLHHLLDD 271
Query: 165 VDSSLIAKYLDT----SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFV-FIPEYWPDF 217
+D S+ A+ L+ + P D+++RT G RLSDF+LWQ S + F+ ++WP F
Sbjct: 272 IDFSISAQDLEHNMQLAHSPPLDILVRTSGVSRLSDFMLWQCTDSTHLHFVDKFWPQF 329
>gi|71068242|gb|AAZ23097.1| hypothetical protein [Streptomyces fradiae]
Length = 221
Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 108/225 (48%), Gaps = 15/225 (6%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ +I DGN RWA RGL AGH +G + + GI +LT+F S +N+ RP
Sbjct: 11 HVAVIPDGNRRWAKRRGLDSGAGHAEGARRAVSLAEWCRDWGISHLTVFLMSRSNFNRPD 70
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E++ L++ ++ + ++ ++ IG+ L ++ A + L++
Sbjct: 71 EELAPLLEAVEGVFSR-LSAVPATSLST--IGDLGLLPASSRQRIEGAVGLSPDRPDLHV 127
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A Y S DEI A+ ++ D + I L + PD DL+IRT GE+
Sbjct: 128 NLAVGYDSEDEIRHAVHSVI------------TDGADIKDALALAGQPDVDLVIRTSGER 175
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RLS FL Q A +E F WPDF R F A+ + R RR+G
Sbjct: 176 RLSGFLPLQTAMAELHFTDTLWPDFGRSDFELAVKDFFTRQRRYG 220
>gi|66357138|ref|XP_625747.1| hypothetical protein [Cryptosporidium parvum Iowa II]
gi|46226625|gb|EAK87604.1| conserved hypothetical protein [Cryptosporidium parvum Iowa II]
Length = 252
Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 117/214 (54%), Gaps = 7/214 (3%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+H+ II+DGN R+A A G+ + GH++G + +I+ ++ +K +++F FS+ N+ R
Sbjct: 23 NHVAIILDGNRRYAKAMGISQLEGHKQGALLIKKILPLFIKLKVKYISMFVFSMENFSRN 82
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
+ + +IK ++ K L + N KV + G L ++L LK+ E +T+ N G+
Sbjct: 83 QENVDDTFNVIKDYILKEGNWLNEKNSKVVISGKIEMLPKELLDTLKDLELKTKENNGIV 142
Query: 132 LFIAFNYSSRDEISRAIKNI---FQDIESGSVCS-HDVDSS--LIAKYLDTSDVPDPDLI 185
L I YS E+ A K ++++ S ++ D+ S ++ ++P P+++
Sbjct: 143 LNICCAYSWTAELEMASKKYLENYKNVNSNNINQIQDITLSDEKFKSFIYNPEIPFPNIL 202
Query: 186 IRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFS 218
IRT GE RLSDFL++QV + + F+ WP +
Sbjct: 203 IRTSGETRLSDFLIYQVCHNTRIYFVKTLWPQIN 236
>gi|159041359|ref|YP_001540611.1| undecaprenyl diphosphate synthase [Caldivirga maquilingensis
IC-167]
gi|157920194|gb|ABW01621.1| undecaprenyl diphosphate synthase [Caldivirga maquilingensis
IC-167]
Length = 235
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 118/232 (50%), Gaps = 11/232 (4%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW-R 69
P+HIGII DGN RWA A G+ + G + E++ A + ++ +T++ S N+
Sbjct: 9 PNHIGIIPDGNRRWAMAHGMDIYTAYLIGSDKVEEVLEWALDNNVQAVTVYILSYENFMN 68
Query: 70 RPVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
R E L +L+ LKK + N +KV +IG +L ++ + + T +
Sbjct: 69 RSEMEKRILYELLIRKLKKAREDPRIHGNKVKVTLIGRWRNLPPYVVDEAIKTMNATEMY 128
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP--DLI 185
L +A Y I + I G + + D LI K L TS +P+P DL+
Sbjct: 129 NSHFLNLAVVYGGYQSIVDLVNTAITKI--GRLIN---DDELI-KLLPTSFLPNPFIDLV 182
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRTGGE+RLS+F + Y+E F+ +YWPDFSRE F AL Y +R+FG
Sbjct: 183 IRTGGERRLSNFFPLESIYAELYFLDKYWPDFSREDFQEALRYYASVERKFG 234
>gi|164605018|dbj|BAF98305.1| cis-prenyl transferase [Hevea brasiliensis]
Length = 296
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 116/243 (47%), Gaps = 35/243 (14%)
Query: 5 MMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+++ P P H+ I+DGN R+A LP GH+ G ++ E+G+K TI+AF
Sbjct: 26 ILTQGPIPTHLAFILDGNRRFAKKHKLPEGGGHKAGFLALLNVLTYCYELGVKYATIYAF 85
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEA 120
SI+N+RR E+ ++ L+ ++ + +I VR +GN L + + ++
Sbjct: 86 SIDNFRRKPHEVQYVMDLMLEKIEGMIMEESIINAYDICVRFVGNLKLLSEPVKTAADQS 145
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD-IESGSVCSHDVDSS----------- 168
T N+ L IA YSS DEI A++ +D + S VC++ +++
Sbjct: 146 MRATANNSRFVLLIAVAYSSTDEIVHAVEESSKDKLNSNEVCNNGIEAEQEFKEANGTGN 205
Query: 169 ---------------LIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQ----VAYSEFVF 209
L+ +T P PD++IRT GE RLS++LLWQ + YS +
Sbjct: 206 SVIPVQKTESYSGIKLVDLEKNTYINPYPDVLIRTSGETRLSNYLLWQTTNCILYSPYAL 265
Query: 210 IPE 212
PE
Sbjct: 266 WPE 268
>gi|188590328|ref|YP_001922033.1| undecaprenyl pyrophosphate synthetase [Clostridium botulinum E3
str. Alaska E43]
gi|188500609|gb|ACD53745.1| undecaprenyl pyrophosphate synthetase [Clostridium botulinum E3
str. Alaska E43]
Length = 213
Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 108/230 (46%), Gaps = 22/230 (9%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+I DGN RWA A GL + G+ G+ E+ + GI +T + F+++N +R
Sbjct: 4 PKHIGVIPDGNRRWALANGLTKDKGYSFGVNPGLEVFKLCQKEGISEVTFYGFTVDNTKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS--LDDDILCVLKEAEDQTRLNT 128
P + + +K L K N ++ V+GN S ++L K T
Sbjct: 64 PSEQKIAFTEACIESVK----LLTKENCEILVLGNTDSKLFPKELLPFSKRTTFGT---G 116
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
G+ + NY ++ NI ++ +D I Y+ + D+ DLIIR
Sbjct: 117 GIKVNFLMNYGWEWDL-----NILKE--------NDSSHKGIIPYIHSKDISRIDLIIRW 163
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GG +RLS FL Q YS+F I YWP F F+ ALN YN +D GG
Sbjct: 164 GGRRRLSGFLPAQCVYSDFYVIDSYWPAFKTTEFYDALNWYNDQDVTLGG 213
>gi|296132449|ref|YP_003639696.1| Di-trans-poly-cis-decaprenylcistransferase [Thermincola sp. JR]
gi|296031027|gb|ADG81795.1| Di-trans-poly-cis-decaprenylcistransferase [Thermincola potens JR]
Length = 225
Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 112/230 (48%), Gaps = 16/230 (6%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+I DGN RWA GLP+ AG+ GI + A+E+GI+ +T + F+ +N +R
Sbjct: 10 PRHIGVIPDGNRRWAEKNGLPKEAGYSWGIAPGFYLYELASELGIEEMTFYGFTHDNTKR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS--LDDDILCVLKEAEDQTRLNT 128
P + K + L + + + V+GN S ++L K+ + +
Sbjct: 70 PTVQKRAFQKACVD----AVFKLLEKDAALLVVGNTESPAFPRELLPFTKKRVNIGKGGM 125
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+N + NY ++ +K + S H SL ++D+ DL+IR
Sbjct: 126 RVNFLV--NYGWHWDLYHGMK---AALPRKSAAKHVFHQSLA-----SADISRIDLVIRW 175
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GG +RLS FL Q Y++F + + WPDF E F++AL Y ++D GG
Sbjct: 176 GGRRRLSGFLPVQTIYADFFIVDDLWPDFKPEHFYNALRWYEVQDITLGG 225
>gi|255089078|ref|XP_002506461.1| predicted protein [Micromonas sp. RCC299]
gi|226521733|gb|ACO67719.1| predicted protein [Micromonas sp. RCC299]
Length = 264
Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 117/225 (52%), Gaps = 5/225 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I+MDGN R+A RGL + +GH G E E++ + +G++ L+++AFS +N++R
Sbjct: 4 PKHVAIVMDGNRRFAETRGLRKESGHEFGAEKLLEVLEWSLALGVECLSVYAFSTDNFKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+E+ L +L + L + S + N++V+V+G L + T ++
Sbjct: 64 SETEVDVLFQLAERRLDEMATSRVIHDRNVRVQVLGELHMLPPGVRRAAARVMAATAAHS 123
Query: 129 -GLNLFIAFNYSSRDEISRAIKNIFQDIESGSV-CSHDVDSSLIAKYLDTSDVPDPDLII 186
G L + F Y+ R+++ A+ + + + G++ DV + P DL+I
Sbjct: 124 DGPVLNVCFAYTGREDVCLAVGAMARGVGEGTLDPVDDVTERPSDETGRKPGAPPVDLLI 183
Query: 187 RTGGEKRLSDFLLWQVA-YSEFVFIPEYWPDFSRELFFHALNQYN 230
RT GE RLSDF+LW ++ ++ F WPDFS +A+ Y
Sbjct: 184 RTSGETRLSDFMLWGISGHAVLCFQEVLWPDFSFTDMCYAVWTYQ 228
>gi|22213585|gb|AAM92880.1| cis-prenyltransferase 1 [Hevea brasiliensis]
gi|22213603|gb|AAM92889.1| cis-prenyltransferase 10 [Hevea brasiliensis]
gi|22213605|gb|AAM92890.1| cis-prenyltransferase 11 [Hevea brasiliensis]
Length = 290
Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 117/239 (48%), Gaps = 31/239 (12%)
Query: 4 SMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
S+++ P P HI I+DGN R+A LP GH+ G ++ E+G+K TI+A
Sbjct: 25 SILTQGPIPTHIAFILDGNRRFAKKHKLPEGGGHKAGFLALLNVLTYCYELGVKYATIYA 84
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKE 119
FSI+N+RR E+ ++ L+ ++ + +I VR +GN L + + +
Sbjct: 85 FSIDNFRRKPHEVQYVMDLMLEKIEGMIMEESIINAYDICVRFVGNLKLLSEPVKTAADK 144
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSH----DVDSSLIAKYLD 175
T N+ L IA Y+S DEI A++ ++ S VC++ + +++ + +
Sbjct: 145 IMRATANNSKCVLLIAVCYTSTDEIVHAVEE-SSELNSNEVCNNQELEEANATGSSTVIQ 203
Query: 176 TSDV------------------PDPDLIIRTGGEKRLSDFLLWQ----VAYSEFVFIPE 212
T ++ P PD++IRT GE RLS++LLWQ + YS + PE
Sbjct: 204 TENMESYSGIKLVDLEKNTYINPYPDVLIRTSGETRLSNYLLWQTTNCILYSPYALWPE 262
>gi|322805647|emb|CBZ03212.1| undecaprenyl pyrophosphate synthetase [Clostridium botulinum H04402
065]
Length = 215
Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 111/230 (48%), Gaps = 20/230 (8%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HIGII DGN RWA +G+ + G++ G+ + VGI +T + F+ +N +R
Sbjct: 4 PNHIGIIPDGNRRWANNKGMEKQCGYKFGLNPGLILFRLCKAVGINEITYYGFTTDNNKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS--LDDDILCVLKEAEDQTRLNT 128
P + K ++ L + + V+GN S ++L KE + +
Sbjct: 64 PKVQRESFTKACVEAVE----MLCNEDASLLVVGNTESSMFPKELLPYTKERKVFKKGGI 119
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+N + + + QD+E+ + S + I K++ ++D+ DLIIR
Sbjct: 120 KVNFLVNYGWEWD----------LQDLENNKLSSRNK----INKHIKSTDISRVDLIIRW 165
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GG +RLS FL Q YS+F I +YWPDF E + AL Y+ +D GG
Sbjct: 166 GGRRRLSGFLPIQSVYSDFYIIEDYWPDFKSEHLYEALEWYDKQDITLGG 215
>gi|22213587|gb|AAM92881.1| cis-prenyltransferase 2 [Hevea brasiliensis]
Length = 290
Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 117/239 (48%), Gaps = 31/239 (12%)
Query: 4 SMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
S+++ P P HI I+DGN R+A LP GH+ G ++ E+G+K TI+A
Sbjct: 25 SILTQGPIPTHIAFILDGNRRFAKKHKLPEGGGHKAGFLALLNVLTYCYELGVKYATIYA 84
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKE 119
FSI+N+RR E+ ++ L+ ++ + +I VR +GN L + + +
Sbjct: 85 FSIDNFRRKPHEVQYVMDLMLEKIEGMIMEESIINAYDICVRFVGNLKLLSEPVKTAADK 144
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSH----DVDSSLIAKYLD 175
T N+ L IA Y+S DEI A++ ++ S VC++ + +++ + +
Sbjct: 145 IMRATANNSKCVLLIAVCYTSTDEIVHAVEE-SSELNSNEVCNNQELEEANATGSSTVIQ 203
Query: 176 TSDV------------------PDPDLIIRTGGEKRLSDFLLWQ----VAYSEFVFIPE 212
T ++ P PD++IRT GE RLS++LLWQ + YS + PE
Sbjct: 204 TENMESYSGIKLVDLEKNTYINPYPDVLIRTSGETRLSNYLLWQTTNCILYSPYALWPE 262
>gi|251780875|ref|ZP_04823795.1| undecaprenyl pyrophosphate synthetase [Clostridium botulinum E1
str. 'BoNT E Beluga']
gi|243085190|gb|EES51080.1| undecaprenyl pyrophosphate synthetase [Clostridium botulinum E1
str. 'BoNT E Beluga']
Length = 213
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 109/230 (47%), Gaps = 22/230 (9%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+I DGN RWA A GL + G+ G+ E+ + GI +T + F+++N +R
Sbjct: 4 PKHIGVIPDGNRRWALANGLTKDKGYSFGVNPGLEVFKLCQKEGISEVTFYGFTVDNTKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILC--VLKEAEDQTRLNT 128
P + + +K L K N ++ V+GN D + +L ++ T
Sbjct: 64 PSEQKIAFTEACIESVK----LLTKENCEILVLGNT---DSKLFPKELLPFSKRTTFGAG 116
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
G+ + NY ++ NI ++ +D I Y+ + D+ DLIIR
Sbjct: 117 GIKVNFLMNYGWEWDL-----NILKE--------NDSSHKGIIPYIHSKDISRIDLIIRW 163
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GG +RLS FL Q YS+F I YWP F F+ ALN YN +D GG
Sbjct: 164 GGRRRLSGFLPAQCVYSDFYVIDSYWPAFKTTEFYDALNWYNDQDVTLGG 213
>gi|322489442|emb|CBZ24700.1| cis-prenyltransferase-like protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 389
Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 123/243 (50%), Gaps = 29/243 (11%)
Query: 23 RWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLI 82
R+AAA GHR G E E+++ + E I +T++AFS +NW RP +E+ L+ L
Sbjct: 147 RFAAAIQHSSLDGHRVGGEKLLEVISHSMEAHIDMVTVYAFSTDNWNRPAAEVDALMSLF 206
Query: 83 KSFLKKGFYSLKKNNIKVRVIGNR-LSLDDDILCVLKEAEDQTRLNTG--LNLFIAFNYS 139
F + + +I VR I L ++ ++ E +TR+ L L I +YS
Sbjct: 207 FFFFDRIRKEALERHIFVRFISTEPFRLPPRVVEFMRSVERETRVVQPRRLVLNICVSYS 266
Query: 140 SRDEI----SRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS------------------ 177
+ E+ +R + +D SG+ + V + + + LD
Sbjct: 267 GQSEVVVACNRLVARRLRD-SSGTASAAAVATEVTKEELDREMLRSITQNEHEAEDAHIF 325
Query: 178 --DVP-DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
DV +P+LI+RT GE+R+S+FLL++ AYSEFVF+ + WP+ ++E AL+ + R++
Sbjct: 326 GGDVSVEPELILRTSGEQRISNFLLYECAYSEFVFLDKTWPEVTKEDIRQALSDFTRREK 385
Query: 235 RFG 237
R G
Sbjct: 386 RKG 388
>gi|304316706|ref|YP_003851851.1| Di-trans-poly-cis-decaprenylcistransferase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778208|gb|ADL68767.1| Di-trans-poly-cis-decaprenylcistransferase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 216
Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 114/233 (48%), Gaps = 26/233 (11%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HIGII DGN RWA + +P+ AG+ G+E + E+G+K LT + F+ +N +R
Sbjct: 5 PNHIGIIPDGNRRWAQNKNMPKEAGYSYGLEPGIALYRLCRELGVKELTFYGFTQDNTKR 64
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS--LDDDILCVLKE---AEDQTR 125
P + K +K L+K + + VIGN S ++L L E + +
Sbjct: 65 PSVQTEAFKKACIDAVK----MLEKEDADLLVIGNYNSPMFPKELLPYLSRKTIGEGKMK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
+N NY + +++ A+K + + + I + + D+ DLI
Sbjct: 121 VN------FLVNYGWQWDLNSALKAL-----------SNGEKRDILDLISSKDISRIDLI 163
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
IR GG +RLS FL Q YS+F I +YWPDF + + AL Y+ +D GG
Sbjct: 164 IRWGGRRRLSGFLPVQSIYSDFYVIDDYWPDFKPQHLYEALEWYSKQDITLGG 216
>gi|16751461|dbj|BAB71777.1| cis-prenyltransferase [Hevea brasiliensis]
Length = 284
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 113/232 (48%), Gaps = 23/232 (9%)
Query: 4 SMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
S+++ P P HI I+DGN R+A LP GH+ G ++ E+G+K TI+A
Sbjct: 25 SILTQGPIPTHIAFILDGNRRFAKKHKLPEGGGHKAGFLALLNVLTYCYELGVKYATIYA 84
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKE 119
FSI+N+RR E+ ++ L+ ++ + +I VR +GN L + + +
Sbjct: 85 FSIDNFRRKPHEVQYVMDLMLEKIEGMIMEESIINAYDICVRFVGNLKLLSEPVKTAADK 144
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD-IESGSVCSHD-------------- 164
T N+ L +A Y+S DEI A++ +D ++S +C+
Sbjct: 145 IMRATANNSKFVLLLAVCYTSTDEIVHAVEESSKDKLKSNEICNDGNGDCVIKIEEMEPY 204
Query: 165 VDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQ----VAYSEFVFIPE 212
+ L+ +T P PD++IRT GE RLS++LLWQ + YS PE
Sbjct: 205 SEIKLVELERNTYINPYPDVLIRTSGETRLSNYLLWQTTNCILYSPHALWPE 256
>gi|254585101|ref|XP_002498118.1| ZYRO0G02662p [Zygosaccharomyces rouxii]
gi|238941012|emb|CAR29185.1| ZYRO0G02662p [Zygosaccharomyces rouxii]
Length = 346
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 111/225 (49%), Gaps = 8/225 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IMDGN R+A +P GH G + ++G++ ++ +AFSI N+ R
Sbjct: 68 PQHISFIMDGNRRFAKKMNMPVKRGHEAGGVTLLSLCYVLKKMGVRCVSAYAFSIENFNR 127
Query: 71 PVSEISEL-----VKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
P E++ L VKL + K Y +++++G+ + +++ +K E+ T
Sbjct: 128 PPEEVNALTNMFAVKLDEFARKANDYRDPLYQSRLKIVGDHSLISEEMREKIKRVEEMTN 187
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP-DL 184
LFI F Y+SR++I A + ++ S+ + K + +D DL
Sbjct: 188 DGDEFTLFICFPYTSRNDIWHATQTSVEECVQQSLEPRALTVEEFNKKMYLNDYSHKCDL 247
Query: 185 IIRTGGEKRLSDFLLWQVAYS-EFVFIPEYWPDFS-RELFFHALN 227
+IRT G RLSD++LWQV S + F P WPDF +L+ LN
Sbjct: 248 LIRTSGHLRLSDYMLWQVHESGDIKFSPTLWPDFKFFQLYLMILN 292
>gi|156054508|ref|XP_001593180.1| hypothetical protein SS1G_06102 [Sclerotinia sclerotiorum 1980]
gi|154703882|gb|EDO03621.1| hypothetical protein SS1G_06102 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 353
Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 131/305 (42%), Gaps = 71/305 (23%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ +MDGN R+A + + GH G E I+ + G+K +T+
Sbjct: 30 LIGALRQGPIPQHVAFVMDGNRRFARSHKIETVEGHNLGFEALARILEVCYKSGVKVVTV 89
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+++ K L + L + VRV+G R + DD+L +
Sbjct: 90 YAFSIENFKRSKYEVDALMEMAKVKLVQLAQHGDLLDRYGASVRVLGQRNLVKDDVLEAI 149
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKN--------------------IFQDIES 157
A + T+ N L I F Y+SRDEI+ AIK I Q ++S
Sbjct: 150 DRAVEMTKNNGDCALNICFPYTSRDEITTAIKTTVENYSKPTYTQQRPFSQTRITQKLKS 209
Query: 158 ---GSVCSHDV-------------------DSSLIAKYLDTSD-----VPDPDLI----- 185
SV + D+ ++L + TS PDP+LI
Sbjct: 210 RNVNSVSNQDLREISPTPSSRSEPDESVSSSTTLNPESSTTSSPEAGVFPDPELISVDTL 269
Query: 186 ---------------IRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFFHALNQY 229
IRT G RLSDF+LWQ +E VF+ WP+F F L ++
Sbjct: 270 AENLFTAGDPPLDLLIRTSGVNRLSDFMLWQCHEDTEIVFLDCLWPEFDLWQFLPVLVEW 329
Query: 230 NLRDR 234
+ +
Sbjct: 330 QWKQK 334
>gi|46203623|ref|ZP_00051246.2| COG0020: Undecaprenyl pyrophosphate synthase [Magnetospirillum
magnetotacticum MS-1]
Length = 117
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 64/92 (69%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWAA+ GLPR GHR+G+E V +A +GI LT+++FS NW R
Sbjct: 26 PRHVAIIMDGNGRWAASLGLPRFEGHRRGVEAVRRAVRSAISLGIGYLTVYSFSSENWSR 85
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRV 102
P SE+S+L+ L+K F++ L +N++VRV
Sbjct: 86 PASEVSDLMGLLKLFVRGDLADLHASNVRVRV 117
>gi|153939822|ref|YP_001390687.1| undecaprenyl pyrophosphate synthetase-like protein [Clostridium
botulinum F str. Langeland]
gi|152935718|gb|ABS41216.1| undecaprenyl pyrophosphate synthetase homolog [Clostridium
botulinum F str. Langeland]
gi|295318761|gb|ADF99138.1| undecaprenyl pyrophosphate synthetase-like protein [Clostridium
botulinum F str. 230613]
Length = 215
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 111/230 (48%), Gaps = 20/230 (8%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HIGII DGN RWA +G+ + G++ G+ + VGI +T + F+ +N +R
Sbjct: 4 PNHIGIIPDGNRRWANNKGMEKQCGYKFGLNPGLILFRLCKAVGINEITYYGFTTDNNKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS--LDDDILCVLKEAEDQTRLNT 128
P + K ++ L + + V+GN S +++L KE + +
Sbjct: 64 PKVQRESFTKACVEAVE----MLCNEDASLLVVGNTESSMFPNELLPYTKERKVFKKGGI 119
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+N + + + Q +E+ + S + I K++ ++D+ DLIIR
Sbjct: 120 KVNFLVNYGWEWD----------LQSLENNKLSSRNK----INKHIKSTDISRVDLIIRW 165
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GG +RLS FL Q YS+F I +YWPDF E + AL Y+ +D GG
Sbjct: 166 GGRRRLSGFLPIQSVYSDFYIIEDYWPDFKSEHLYEALEWYDKQDITLGG 215
>gi|258514281|ref|YP_003190503.1| Di-trans,poly-cis-decaprenylcistransferase [Desulfotomaculum
acetoxidans DSM 771]
gi|257777986|gb|ACV61880.1| Di-trans,poly-cis-decaprenylcistransferase [Desulfotomaculum
acetoxidans DSM 771]
Length = 220
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 114/229 (49%), Gaps = 19/229 (8%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGII DGN RWA ++G + AG+ G+E ++ ++G+K LT + F+ +N +R
Sbjct: 10 PKHIGIIPDGNRRWAQSKGFAKEAGYEFGLEPGLQLYDLCVKLGVKELTFYGFTQDNTKR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS-LDDDILCVLKEAEDQTRLNTG 129
P ++ K +K L + + + VIGN S L L V + + +
Sbjct: 70 PSAQRKAFQKACTDAVK----MLSQKDASLLVIGNAASPLFPPELKVYTKRQVFGKDLIK 125
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+N + NY + ++ A++ + + + K + +S+V DLIIR G
Sbjct: 126 INFLV--NYGWKWDLYSALQ------------TSSFNQTNPVKAIASSEVSRIDLIIRWG 171
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
G +RLS FL Q YS+F + + WPDF + F+ AL Y+ +D GG
Sbjct: 172 GRRRLSGFLPIQSIYSDFYIVEDMWPDFKPDHFYEALAWYDCQDTTLGG 220
>gi|239623282|ref|ZP_04666313.1| di-trans-poly-cis-decaprenylcistransferase [Clostridiales bacterium
1_7_47_FAA]
gi|239522248|gb|EEQ62114.1| di-trans-poly-cis-decaprenylcistransferase [Clostridiales bacterium
1_7_47FAA]
Length = 217
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 112/230 (48%), Gaps = 18/230 (7%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGII DGN RWA RG+ + G+R GI + E+GI+ ++ + F+++N +R
Sbjct: 4 PKHIGIIPDGNRRWALDRGMEKKDGYRHGISPGMTLYHMCRELGIEEMSFYGFTVDNTKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS--LDDDILCVLKEAEDQTRLNT 128
P ++ K + +++ L K + + V+GN S ++L + +
Sbjct: 64 PSTQRQAFTKACVAAVEE----LSKEDASLLVLGNTQSPMFPPELLPYTRRHDFGA---G 116
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
G+ + NYS ++ N + + S+ I L T+DV DL+IR
Sbjct: 117 GMRINFLVNYSWEWDMGFKPDNSRKAPAA---------SAAIGPVLRTADVSRIDLVIRW 167
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GG +RLS FL Q YS+ + +YWPDF +E AL Y+ +D GG
Sbjct: 168 GGRRRLSGFLPVQSVYSDIYVVDDYWPDFRKEHVEAALKWYSDQDVTLGG 217
>gi|170754428|ref|YP_001780961.1| undecaprenyl pyrophosphate synthetase-like protein [Clostridium
botulinum B1 str. Okra]
gi|169119640|gb|ACA43476.1| undecaprenyl pyrophosphate synthetase homolog [Clostridium
botulinum B1 str. Okra]
Length = 215
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 110/230 (47%), Gaps = 20/230 (8%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HIGII DGN RWA +G+ + G++ G+ + VGI +T + F+ +N +R
Sbjct: 4 PNHIGIIPDGNRRWANNKGMEKQCGYKFGLNPGLILFRLCKAVGINEITYYGFTTDNNKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS--LDDDILCVLKEAEDQTRLNT 128
P + K ++ L + + V+GN S ++L KE + +
Sbjct: 64 PKVQRESFTKACVEAVE----MLCNEDASLLVVGNTESSMFPKELLPYTKERKVFKKGGI 119
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+N + + + Q +E+ + S + I K++ ++D+ DLIIR
Sbjct: 120 KVNFLVNYGWEWD----------LQSLENNKLSSRNK----INKHIKSTDISRVDLIIRW 165
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GG +RLS FL Q YS+F I +YWPDF E + AL Y+ +D GG
Sbjct: 166 GGRRRLSGFLPIQSVYSDFYIIEDYWPDFKSEHLYEALKWYDKQDITLGG 215
>gi|16751459|dbj|BAB71776.1| cis-prenyltransferase [Hevea brasiliensis]
Length = 290
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 115/239 (48%), Gaps = 31/239 (12%)
Query: 4 SMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
S+++ P P HI I+DGN R+A LP GH+ G ++ E+G+K TI+A
Sbjct: 25 SILTQGPIPTHIAFILDGNRRFAKKHKLPEGGGHKAGFLALLNVLTYCYELGVKYATIYA 84
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKE 119
FSI+N+RR E+ ++ L+ ++ + +I VR +GN L + + +
Sbjct: 85 FSIDNFRRKPHEVQYVMDLMLEKIEGMIMEESIINAYDICVRFVGNLKLLSEPVKTAADK 144
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSH---------------- 163
T N+ L IA Y+S DEI A++ ++ S VC++
Sbjct: 145 IMRATANNSKCVLLIAVCYTSTDEIVHAVEE-SSELNSNEVCNNQELEEANATGSGTVIQ 203
Query: 164 --DVDSSLIAKYLD----TSDVPDPDLIIRTGGEKRLSDFLLWQ----VAYSEFVFIPE 212
+++S K +D T P PD++IRT GE RLS++LLWQ + YS PE
Sbjct: 204 IENMESYSGIKLVDLEKNTYINPYPDVLIRTSGETRLSNYLLWQTTNCILYSPHALWPE 262
>gi|20563020|dbj|BAB92023.1| cis-prenyltransferase1 [Hevea brasiliensis]
gi|22213591|gb|AAM92883.1| cis-prenyltransferase 4 [Hevea brasiliensis]
gi|22213593|gb|AAM92884.1| cis-prenyltransferase 5 [Hevea brasiliensis]
gi|22213595|gb|AAM92885.1| cis-prenyltransferase 6 [Hevea brasiliensis]
gi|22213599|gb|AAM92887.1| cis-prenyltransferase 8 [Hevea brasiliensis]
gi|22213601|gb|AAM92888.1| cis-prenyltransferase 9 [Hevea brasiliensis]
Length = 290
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 115/239 (48%), Gaps = 31/239 (12%)
Query: 4 SMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
S+++ P P HI I+DGN R+A LP GH+ G ++ E+G+K TI+A
Sbjct: 25 SILTQGPIPTHIAFILDGNRRFAKKHKLPEGGGHKAGFLALLNVLTYCYELGVKYATIYA 84
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKE 119
FSI+N+RR E+ ++ L+ ++ + +I VR +GN L + + +
Sbjct: 85 FSIDNFRRKPHEVQYVMDLMLEKIEGMIMEESIINAYDICVRFVGNLKLLSEPVKTAADK 144
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSH---------------- 163
T N+ L IA Y+S DEI A++ ++ S VC++
Sbjct: 145 IMRATANNSKCVLLIAVCYTSTDEIVHAVEE-SSELNSNEVCNNQELEEANATGSGTVIQ 203
Query: 164 --DVDSSLIAKYLD----TSDVPDPDLIIRTGGEKRLSDFLLWQ----VAYSEFVFIPE 212
+++S K +D T P PD++IRT GE RLS++LLWQ + YS PE
Sbjct: 204 IENMESYSGIKLVDLEKNTYINPYPDVLIRTSGETRLSNYLLWQTTNCILYSPHALWPE 262
>gi|77410087|ref|ZP_00786620.1| undecaprenyl diphosphate synthase [Streptococcus agalactiae COH1]
gi|77171303|gb|EAO74639.1| undecaprenyl diphosphate synthase [Streptococcus agalactiae COH1]
Length = 138
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 63/99 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA R PR GH+ G++ E AA+E+G+K LT++AFS NW R
Sbjct: 18 PAHIGIIMDGNGRWAKKRLKPRVMGHKAGMDALQEXTIAASELGVKVLTVYAFSTENWSR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSL 109
P E+ ++ L F K L KNN++V+VIG+ L
Sbjct: 78 PDDEVKFIMNLPVEFFDKYVPELDKNNVRVQVIGDTHKL 116
>gi|260899615|ref|ZP_05908010.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio parahaemolyticus
AQ4037]
gi|308108744|gb|EFO46284.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio parahaemolyticus
AQ4037]
Length = 146
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 79/124 (63%)
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
EAE+ T NTG+ + IA NY + +I+ A K + +G + D++ LI ++L +D
Sbjct: 15 EAENLTASNTGMVINIAANYGGKWDITEAAKALALKARNGEIRVEDINEQLITEHLTMAD 74
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+P+ DL+IRT GE R+S+F+LWQ+AY+E F PE+WP+F + A+ + R+RRFG
Sbjct: 75 LPEVDLLIRTSGECRISNFMLWQMAYAEMYFTPEFWPEFDEDSLVEAVTWFINRERRFGC 134
Query: 239 LSKK 242
++
Sbjct: 135 TGEQ 138
>gi|148379307|ref|YP_001253848.1| undecaprenyl pyrophosphate synthetase-like protein [Clostridium
botulinum A str. ATCC 3502]
gi|153933992|ref|YP_001383682.1| undecaprenyl pyrophosphate synthetase-like protein [Clostridium
botulinum A str. ATCC 19397]
gi|153935982|ref|YP_001387230.1| undecaprenyl pyrophosphate synthetase-like protein [Clostridium
botulinum A str. Hall]
gi|148288791|emb|CAL82875.1| putative undecaprenyl pyrophosphate synthetase [Clostridium
botulinum A str. ATCC 3502]
gi|152930036|gb|ABS35536.1| undecaprenyl pyrophosphate synthetase homolog [Clostridium
botulinum A str. ATCC 19397]
gi|152931896|gb|ABS37395.1| undecaprenyl pyrophosphate synthetase homolog [Clostridium
botulinum A str. Hall]
Length = 215
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 110/230 (47%), Gaps = 20/230 (8%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HIGII DGN RWA +G+ + G++ G+ + VGI +T + F+ +N +R
Sbjct: 4 PNHIGIIPDGNRRWANNKGMEKQCGYKFGLNPGLILFRLCKAVGINEITYYGFTTDNNKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS--LDDDILCVLKEAEDQTRLNT 128
P + K ++ L + + V+GN S ++L KE + +
Sbjct: 64 PKVQRQSFTKACVEAVE----MLCNEDASLLVVGNTESSMFPKELLPYTKERKVFKKGGI 119
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+N + + + Q +E+ + S + I K++ ++D+ DLIIR
Sbjct: 120 KVNFLVNYGWEWD----------LQALENNKLSSRNK----INKHIKSTDISRVDLIIRW 165
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GG +RLS FL Q YS+F I +YWPDF E + AL Y+ +D GG
Sbjct: 166 GGRRRLSGFLPIQSVYSDFYIIEDYWPDFKSEHLYEALEWYDKQDITLGG 215
>gi|303288111|ref|XP_003063344.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455176|gb|EEH52480.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 222
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 114/234 (48%), Gaps = 20/234 (8%)
Query: 4 SMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
++ S P P+H+ I+MDGN R+AA+R LP GH G + +++ +G++ L+++A
Sbjct: 1 ALRSRGPIPEHVAIVMDGNRRFAASRSLPTGVGHSAGADKLVDVMRWCHLLGVRVLSVYA 60
Query: 63 FSINNWRRPVSEISELVKLIKSFLK--KGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FS N+ RP E+ L L ++ ++ + ++VRV+G+ SL + +
Sbjct: 61 FSSENFARPRDELDALFSLAETRFDDLATHPAVTERRVRVRVLGDLASLPKGVRDAAERV 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
T + G L + F Y+ R ++ + + G C+ D S+ +A
Sbjct: 121 TAATAAHDGPRLDVYFAYTGRGDV---VGATLERCMRGGACAEDGTSTTVAV-------- 169
Query: 181 DPDLIIRTGGEKRLSDFLLWQV----AYSEFVFIPEYWPDFSRELFFHALNQYN 230
DL++RT GE RLSDF LW + ++ F WPDFS HA+ Y
Sbjct: 170 --DLLVRTSGETRLSDFTLWGIRRVLKHAVLCFADVLWPDFSFADMCHAVWTYQ 221
>gi|6323748|ref|NP_013819.1| Srt1p [Saccharomyces cerevisiae S288c]
gi|2501565|sp|Q03175|SRT1_YEAST RecName: Full=Putative dehydrodolichyl diphosphate synthase;
Short=DEDOL-PP synthase
gi|854438|emb|CAA89902.1| unknown [Saccharomyces cerevisiae]
gi|4126459|dbj|BAA36578.1| cis-prenyltransferase homologue [Saccharomyces cerevisiae]
gi|151946257|gb|EDN64488.1| cis-prenyltransferase [Saccharomyces cerevisiae YJM789]
gi|190408330|gb|EDV11595.1| hypothetical protein SCRG_01991 [Saccharomyces cerevisiae RM11-1a]
gi|256269980|gb|EEU05230.1| Srt1p [Saccharomyces cerevisiae JAY291]
gi|285814103|tpg|DAA09998.1| TPA: Srt1p [Saccharomyces cerevisiae S288c]
Length = 343
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 119/238 (50%), Gaps = 16/238 (6%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IMDGN R+A +R LP GH G ++ +G+K ++ +AFSI N+ R
Sbjct: 67 PEHVSFIMDGNRRYAKSRRLPVKKGHEAGGLTLLTLLYICKRLGVKCVSAYAFSIENFNR 126
Query: 71 PVSEISELVKL----IKSFLKKGF-YSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
P E+ L+ L + F K+ Y K+R++G++ L ++ +K+ E+ T+
Sbjct: 127 PKEEVDTLMNLFTVKLDEFAKRAKDYKDPLYGSKIRIVGDQSLLSPEMRKKIKKVEEITQ 186
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
LFI F Y+SR+++ I++ +D ++ Y+ +L+
Sbjct: 187 DGDDFTLFICFPYTSRNDMLHTIRDSVEDHLENKSPRINIRKFTNKMYMGFHS-NKCELL 245
Query: 186 IRTGGEKRLSDFLLWQVAYSEFV-FIPEYWPDFS---------RELFFHALNQYNLRD 233
IRT G +RLSD++LWQV + + F WP+FS + FF + +YN ++
Sbjct: 246 IRTSGHRRLSDYMLWQVHENATIEFSDTLWPNFSFFAMYLMILKWSFFSTIQKYNEKN 303
>gi|259148674|emb|CAY81919.1| Srt1p [Saccharomyces cerevisiae EC1118]
Length = 343
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 119/238 (50%), Gaps = 16/238 (6%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IMDGN R+A +R LP GH G ++ +G+K ++ +AFSI N+ R
Sbjct: 67 PEHVSFIMDGNRRYAKSRRLPVKKGHEAGGLTLLTLLYICKRLGVKCVSAYAFSIENFNR 126
Query: 71 PVSEISELVKL----IKSFLKKGF-YSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
P E+ L+ L + F K+ Y K+R++G++ L ++ +K+ E+ T+
Sbjct: 127 PKEEVDTLMNLFTVKLDEFAKRAKDYKDPLYGSKIRIVGDQSLLSPEMRKKIKKVEEITQ 186
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
LFI F Y+SR+++ I++ +D ++ Y+ +L+
Sbjct: 187 DGDDFTLFICFPYTSRNDMLHTIRDSVEDHLENKSPRINIRKFTNKMYMGFHS-NKCELL 245
Query: 186 IRTGGEKRLSDFLLWQVAYSEFV-FIPEYWPDFS---------RELFFHALNQYNLRD 233
IRT G +RLSD++LWQV + + F WP+FS + FF + +YN ++
Sbjct: 246 IRTSGHRRLSDYMLWQVHENATIEFSDTLWPNFSFFAMYLMILKWSFFSTIQKYNEKN 303
>gi|168184150|ref|ZP_02618814.1| undecaprenyl pyrophosphate synthetase homolog [Clostridium
botulinum Bf]
gi|237794682|ref|YP_002862234.1| putative undecaprenyl pyrophosphate synthetase [Clostridium
botulinum Ba4 str. 657]
gi|182672709|gb|EDT84670.1| undecaprenyl pyrophosphate synthetase homolog [Clostridium
botulinum Bf]
gi|229263867|gb|ACQ54900.1| putative undecaprenyl pyrophosphate synthetase [Clostridium
botulinum Ba4 str. 657]
Length = 215
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 110/230 (47%), Gaps = 20/230 (8%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HIGII DGN RWA +G+ + G++ G+ + VGI +T + F+ +N +R
Sbjct: 4 PNHIGIIPDGNRRWANNKGMEKQCGYKFGLNPGLILFRLCKAVGINEITYYGFTTDNNKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS--LDDDILCVLKEAEDQTRLNT 128
P + K ++ L + + V+GN S ++L KE + +
Sbjct: 64 PKVQRESFTKACVEAVE----MLCNEDASLLVVGNTESSMFPKELLPYTKERKVFKKGGI 119
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+N + + + Q +E+ + S + I K++ ++D+ DLIIR
Sbjct: 120 KVNFLVNYGWEWD----------LQALENNKLSSRNK----INKHIKSTDISRVDLIIRW 165
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GG +RLS FL Q YS+F I +YWPDF E + AL Y+ +D GG
Sbjct: 166 GGRRRLSGFLPIQSVYSDFYIIEDYWPDFKSEHLYEALKWYDKQDITLGG 215
>gi|150016164|ref|YP_001308418.1| di-trans-poly-cis-decaprenylcistransferase [Clostridium
beijerinckii NCIMB 8052]
gi|149902629|gb|ABR33462.1| Di-trans-poly-cis-decaprenylcistransferase [Clostridium
beijerinckii NCIMB 8052]
Length = 213
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 110/233 (47%), Gaps = 28/233 (12%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGII DGN RWA + L + G+ GI E+ + I+ +T + F+I+N +R
Sbjct: 4 PKHIGIIPDGNRRWALSNSLGKDKGYDHGINPGLEVFKLCQKENIQEVTFYGFTIDNTKR 63
Query: 71 PVSEISELVK-LIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT- 128
P + K I S + L K + ++ V+GN S C KE T+
Sbjct: 64 PSDQKIAFTKACIDSVM-----LLTKEDCEILVLGNTESS-----CFPKELLPFTKRKKF 113
Query: 129 ---GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
G+ NY +++ +KN D+ I +L + D+ DLI
Sbjct: 114 GSGGIKANFLINYGWEWDLN-LLKNA------------DISKKHIQPHLQSKDISRIDLI 160
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
IR GG +RLS L Q YS+F + YWPDF +E F++AL+ YN +D GG
Sbjct: 161 IRWGGRRRLSGLLPVQSVYSDFYILDNYWPDFKKEDFYNALSWYNEQDVTLGG 213
>gi|296005088|ref|XP_001349261.2| dehydrodolichyl diphosphate synthetase, putative [Plasmodium
falciparum 3D7]
gi|225632278|emb|CAD51110.2| dehydrodolichyl diphosphate synthetase, putative [Plasmodium
falciparum 3D7]
Length = 317
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 138/280 (49%), Gaps = 61/280 (21%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
HI IIMDGN R+A +GL GH G + +I+ ++ IK L++F+FS+ N+ R
Sbjct: 22 HISIIMDGNRRFAKEKGLHTAIGHFMGSKTLIQIIEICIKLNIKILSVFSFSLLNYNRSP 81
Query: 73 SEISELVKL-IKSFLKKGFY--SLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
EI L L + + + F+ +K N IK+++IGN ++D ++ + E++T+
Sbjct: 82 EEIHFLFYLNLLVLINEDFFFKFIKDNKIKIKIIGNLSYVNDSYRKIIYDIEEKTKNFNN 141
Query: 130 LNLFIAFNYSSRDEISRA----------IKNIFQD--IESGS------------------ 159
+ L I F+Y+SR+E+S KN+ Q+ I SG+
Sbjct: 142 IRLNIFFSYTSRNEMSLCSFNPNLYRDTYKNLLQEKNIYSGTNILTDPIKEGYFDIPTQE 201
Query: 160 --------------------VCSHDV----DSSLIAKY---LDTSDVPDPDLIIRTGGEK 192
+C V + I Y L TSD+P P+++IRT GE+
Sbjct: 202 EELKYPDHENENELKFDGKCLCREKVKYNEEQLEIVNYHNKLLTSDLPPPNILIRTSGEQ 261
Query: 193 RLSDFLLWQVA-YSEFVFIPEYWPDFSRELFFHALNQYNL 231
RLSDF+L+Q++ ++E FI EYWP F+ F + + Y L
Sbjct: 262 RLSDFMLYQISEFTEIYFINEYWPVFNFLQFIYIILHYTL 301
>gi|315931169|gb|EFV10142.1| di-trans,poly-cis-decaprenylcistransferase [Campylobacter jejuni
subsp. jejuni 327]
Length = 150
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 83/141 (58%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ ++MDGN RWA A+G G+ +G++ +++ E I NL++FAFS NW+RP
Sbjct: 6 HLAVVMDGNRRWARAKGFLAKLGYSQGVKTMQKLMEVCMEENISNLSLFAFSTENWKRPK 65
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
EI + +L+ L + +KNN+++R IG+ L+D + + E++T+ L +
Sbjct: 66 DEIDFIFELLDRCLDEALEKFEKNNVRLRAIGDLSRLEDKVREKITLVEEKTKHCDALCV 125
Query: 133 FIAFNYSSRDEISRAIKNIFQ 153
+A +Y +RDEI RA K + +
Sbjct: 126 NLAISYGARDEIIRAAKRVIE 146
>gi|146080559|ref|XP_001464029.1| cis-prenyltransferase-like protein [Leishmania infantum JPCM5]
Length = 391
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 112/230 (48%), Gaps = 27/230 (11%)
Query: 35 GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLK 94
GHR G E E++ + E GI +T++AFS +NW RP +E+ L+ L F +
Sbjct: 161 GHRVGGEKLLEVIKHSMEAGIDMVTVYAFSTDNWNRPAAEVDALMSLFFFFFDRIRKEAL 220
Query: 95 KNNIKVRVIGNRL-SLDDDILCVLKEAEDQTRLNTGLNLFIAF--NYSSRDEISRAIKNI 151
+ +I VR I L L + ++ E +TR L + F +YS + E+ A +
Sbjct: 221 ERHIFVRFISTELFRLPPRAVEFMRSVERETRAVQPRRLVLNFWVSYSGQSEVVAACNRL 280
Query: 152 F-------QDIESGSVCSHDVDSSLIAKYLDTSDVPD-----------------PDLIIR 187
D S + + +V + + + S D P+LI+R
Sbjct: 281 VARRLRDSTDPASAAAVATEVTKKELDREMLRSITQDEHEAEDAHLFGGDVSVEPELILR 340
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
T GE+R+S+FLL++ AYSEFVF+ + WP+ ++E AL+ + R++R G
Sbjct: 341 TSGEQRISNFLLYECAYSEFVFLDKAWPEVTQEDIRQALSDFTRREKRKG 390
>gi|114052074|ref|NP_001040452.1| dehydrodolichyl diphosphate synthase [Bombyx mori]
gi|95102950|gb|ABF51416.1| dehydrodolichyl diphosphate synthase [Bombyx mori]
Length = 234
Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 99/208 (47%), Gaps = 50/208 (24%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IMDGN R+A + + GH KG + +E + ++GI +T++AFSI N++R
Sbjct: 27 PQHIAFIMDGNRRYAKKNSVDKSTGHHKGFDKLSETLKWCLDLGIPEVTVYAFSIENFKR 86
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L++L + + F +L LD+
Sbjct: 87 SKEEVDALMELAR----EKFQNL---------------LDE------------------- 108
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
DEISRA I ++ + ++D LI++ LD + +P+L++RT G
Sbjct: 109 ---------MSDEISRAASRIIDGVKENKISPENIDEELISQSLD---LGEPELLVRTSG 156
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFS 218
E RLSDF+LWQ++ + F WP+F+
Sbjct: 157 EVRLSDFMLWQISNTVLYFTDVLWPEFT 184
>gi|323347184|gb|EGA81459.1| Srt1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 342
Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 119/238 (50%), Gaps = 16/238 (6%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IMDGN R+A +R LP GH G ++ +G+K ++ +AFSI N+ R
Sbjct: 67 PEHVSFIMDGNRRYAKSRRLPVKKGHEAGGLTLLTLLYICKRLGVKCVSAYAFSIENFNR 126
Query: 71 PVSEISELVKL----IKSFLKKGF-YSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
P E+ L+ L + F K+ Y K+R++G++ L ++ +K+ E+ T+
Sbjct: 127 PKEEVDTLMNLFTVKLDEFAKRAKDYKDPLYGSKIRIVGDQSLLSPEMRKKIKKVEEITQ 186
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
LFI F Y+SR+++ I++ +D ++ Y+ +L+
Sbjct: 187 DGDDFTLFICFPYTSRNDMLHTIRDSVEDHLENKSPRINIRKFTNKMYMGFHS-NKCELL 245
Query: 186 IRTGGEKRLSDFLLWQVAYSEFV-FIPEYWPDFS---------RELFFHALNQYNLRD 233
IRT G +RLSD++LWQV + + F WP+FS + FF + +YN ++
Sbjct: 246 IRTSGHRRLSDYMLWQVHENATIEFSDTLWPNFSFFAMYLMILKWSFFSTIQKYNEKN 303
>gi|168179991|ref|ZP_02614655.1| undecaprenyl pyrophosphate synthetase homolog [Clostridium
botulinum NCTC 2916]
gi|226948608|ref|YP_002803699.1| undecaprenyl pyrophosphate synthetase-like protein [Clostridium
botulinum A2 str. Kyoto]
gi|182668961|gb|EDT80937.1| undecaprenyl pyrophosphate synthetase homolog [Clostridium
botulinum NCTC 2916]
gi|226842900|gb|ACO85566.1| undecaprenyl pyrophosphate synthetase homolog [Clostridium
botulinum A2 str. Kyoto]
Length = 215
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 110/230 (47%), Gaps = 20/230 (8%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HIGII DGN RWA +G+ + G++ G+ + VGI +T + F+ +N +R
Sbjct: 4 PNHIGIIPDGNRRWANNKGMEKQCGYKFGLNPGLILFRLCKAVGINEITYYGFTTDNNKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS--LDDDILCVLKEAEDQTRLNT 128
P + K ++ L + + V+GN S ++L KE + +
Sbjct: 64 PKVQRESFTKACVEAVE----MLCNEDASLLVVGNTESSMFPKELLPYTKERKVFKKGGI 119
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+N + + + Q +E+ + S + I K++ ++D+ DLIIR
Sbjct: 120 KVNFLVNYGWEWD----------LQALENNKLSSRNK----INKHIKSTDISRVDLIIRW 165
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GG +RLS FL Q YS+F I +YWPDF E + AL Y+ +D GG
Sbjct: 166 GGRRRLSGFLPIQSVYSDFYIIEDYWPDFKSEHLYEALEWYDKQDITLGG 215
>gi|254518216|ref|ZP_05130272.1| di-trans-poly-cis-decaprenylcistransferase [Clostridium sp.
7_2_43FAA]
gi|226911965|gb|EEH97166.1| di-trans-poly-cis-decaprenylcistransferase [Clostridium sp.
7_2_43FAA]
Length = 213
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 110/232 (47%), Gaps = 26/232 (11%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HIGII DGN RWA + L + G+ GI E+ + IK +T + F+I+N +R
Sbjct: 4 PEHIGIIPDGNRRWALSNNLSKDKGYSHGINPGLEVFKLCQKENIKEVTFYGFTIDNTKR 63
Query: 71 PVSEISELVK-LIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
P + ++ I S + L K + ++ VIGN S D L + + G
Sbjct: 64 PSEQKKAFIRACIDSVM-----LLTKEDCEILVIGNTES--DVFPQELPPFITRQKFGNG 116
Query: 130 ---LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
+N I + + + + ES S H I + + D+ DLII
Sbjct: 117 GIKVNFLIHYGWEWDLNLLK---------ESDSSKKH------ILPCIHSEDISRIDLII 161
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q YS+F I YWPDF+ + F+ ALN YN +D GG
Sbjct: 162 RWGGRRRLSGFLPVQSVYSDFYVIDTYWPDFNSQDFYSALNWYNDQDITLGG 213
>gi|322497428|emb|CBZ32502.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 391
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 112/230 (48%), Gaps = 27/230 (11%)
Query: 35 GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLK 94
GHR G E E++ + E GI +T++AFS +NW RP +E+ L+ L F +
Sbjct: 161 GHRVGGEKLLEVIKHSMEAGIDMVTVYAFSTDNWNRPAAEVDALMSLFFFFFDRIRKEAL 220
Query: 95 KNNIKVRVIGNRL-SLDDDILCVLKEAEDQTRLNTG--LNLFIAFNYSSRDEISRAIKNI 151
+ +I VR I L L + ++ E +TR L L I +YS + E+ A +
Sbjct: 221 ERHIFVRFISTELFRLPPRAVEFMRSVERETRAVQPRRLVLNICVSYSGQSEVVAACNRL 280
Query: 152 F-------QDIESGSVCSHDVDSSLIAKYLDTSDVPD-----------------PDLIIR 187
D S + + +V + + + S D P+LI+R
Sbjct: 281 VARRLRDSTDPASAAAVATEVTKKELDREMLRSITQDEHEAEDAHLFGGDVSVEPELILR 340
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
T GE+R+S+FLL++ AYSEFVF+ + WP+ ++E AL+ + R++R G
Sbjct: 341 TSGEQRISNFLLYECAYSEFVFLDKAWPEVTQEDIRQALSDFTRREKRKG 390
>gi|40716449|gb|AAR88763.1| cis-prenyltransferase [Hevea brasiliensis]
Length = 290
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 114/238 (47%), Gaps = 31/238 (13%)
Query: 5 MMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+++ P P H+ I+DGN R+A LP GH+ G ++ E+G+K TI+AF
Sbjct: 26 ILTQGPIPTHLAFILDGNRRFAKKHKLPEGGGHKAGFLALLNVLTYCYELGVKYATIYAF 85
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEA 120
SI+N+RR E+ ++ L+ ++ + +I VR +GN L + + +
Sbjct: 86 SIDNFRRKPHEVQYVMNLMLEKIEGMIMEESIINAYDICVRFVGNLKLLSEPVKTAADKI 145
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVC------------------S 162
T N+ L +A Y+S DEI A++ ++ S VC +
Sbjct: 146 MRATANNSKCVLLLAVCYTSTDEIVHAVEE-SSELNSNEVCNNQELEEANATGSGTVIQT 204
Query: 163 HDVDSSLIAKYLD----TSDVPDPDLIIRTGGEKRLSDFLLWQ----VAYSEFVFIPE 212
+++S K +D T P PD++IRT GE RLS++LLWQ + YS + PE
Sbjct: 205 ENMESYSGIKLVDLEKNTYINPYPDVLIRTSGETRLSNYLLWQTTNCILYSPYALWPE 262
>gi|321399160|emb|CAM66404.2| cis-prenyltransferase-like protein [Leishmania infantum JPCM5]
Length = 391
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 112/230 (48%), Gaps = 27/230 (11%)
Query: 35 GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLK 94
GHR G E E++ + E GI +T++AFS +NW RP +E+ L+ L F +
Sbjct: 161 GHRVGGEKLLEVIKHSMEAGIDMVTVYAFSTDNWNRPAAEVDALMSLFFFFFDRIRKEAL 220
Query: 95 KNNIKVRVIGNRL-SLDDDILCVLKEAEDQTRLNTG--LNLFIAFNYSSRDEISRAIKNI 151
+ +I VR I L L + ++ E +TR L L I +YS + E+ A +
Sbjct: 221 ERHIFVRFISTELFRLPPRAVEFMRSVERETRAVQPRRLVLNICVSYSGQSEVVAACNRL 280
Query: 152 F-------QDIESGSVCSHDVDSSLIAKYLDTSDVPD-----------------PDLIIR 187
D S + + +V + + + S D P+LI+R
Sbjct: 281 VARRLRDSTDPASAAAVATEVTKKELDREMLRSITQDEHEAEDAHLFGGDVSVEPELILR 340
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
T GE+R+S+FLL++ AYSEFVF+ + WP+ ++E AL+ + R++R G
Sbjct: 341 TSGEQRISNFLLYECAYSEFVFLDKAWPEVTQEDIRQALSDFTRREKRKG 390
>gi|253682797|ref|ZP_04863592.1| UppS2 [Clostridium botulinum D str. 1873]
gi|253560996|gb|EES90450.1| UppS2 [Clostridium botulinum D str. 1873]
Length = 214
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 111/230 (48%), Gaps = 21/230 (9%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HIGII DGN RWA GL + G+ G+ + ++G+K +T + F+ +N +R
Sbjct: 4 PNHIGIIPDGNRRWAVNNGLTKEKGYNSGLTPGLMLFRLCKKIGVKEITYYGFTTDNTKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS--LDDDILCVLKEAEDQTRLNT 128
P + K + L K + + V+GN S ++L K +
Sbjct: 64 PKIQRLAFSKACVDAVN----LLSKEDADLLVVGNSDSPMFPKELLPFTKR---KAFGKG 116
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
G+ + NY ++S +N + S IA L ++D+ DLIIR
Sbjct: 117 GIKVNFLVNYGWEWDLSNLKENTSSNRNS------------IANTLKSNDISRVDLIIRW 164
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GG +RLS FL Q YS+F + EYWP+F+++ F++AL YN +D GG
Sbjct: 165 GGRRRLSGFLPVQSIYSDFYVVDEYWPNFNKDHFYNALKWYNTQDITLGG 214
>gi|20563022|dbj|BAB92024.1| cis-prenyltransferase2 [Hevea brasiliensis]
Length = 290
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 113/240 (47%), Gaps = 27/240 (11%)
Query: 4 SMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
S+++ P P HI I+DGN R+A LP GH+ G ++ E+G+K TI+A
Sbjct: 25 SILTQGPIPTHIAFILDGNRRFAKKHKLPEGGGHKAGFLALLNVLTYCYELGVKYATIYA 84
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKE 119
FSI+N+RR E+ ++ L+ ++ + +I VR +GN L + + +
Sbjct: 85 FSIDNFRRKPHEVQYVMDLMLEKIEGMIMEESIINAYDICVRFVGNLKLLSEPVKTAADK 144
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSH---------------- 163
T N+ L IA Y+S DEI A++ ++ S VC++
Sbjct: 145 IMRATANNSKCVLLIAVCYTSTDEIVHAVEE-SSELNSNEVCANQELEEANATGSGTVIQ 203
Query: 164 --DVDSSLIAKYLD----TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDF 217
+++S K +D T P PD++IRT GE RLS++LLWQ WP+
Sbjct: 204 IENMESYSGIKLVDLEKNTYINPYPDVLIRTSGETRLSNYLLWQTTNCILDSPHALWPEI 263
>gi|229822230|ref|YP_002883756.1| Di-trans-poly-cis-decaprenylcistransferase [Beutenbergia cavernae
DSM 12333]
gi|229568143|gb|ACQ81994.1| Di-trans-poly-cis-decaprenylcistransferase [Beutenbergia cavernae
DSM 12333]
Length = 264
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 121/242 (50%), Gaps = 21/242 (8%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGL--PRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
++ + P H+G++MDGN RWA G PR GHR G E + ++ A GI +++
Sbjct: 27 ALAGAPVPRHVGLVMDGNRRWARLAGSLDPRV-GHRAGAEHLSVVLGWCARAGIDRASVY 85
Query: 62 AFSINN-WRRPVSEISELVKLIKSFLKKGFYSLKKNNIK--VRVIGNRLSLDDDILCVLK 118
S N +R E++ L+ L+++ + + ++++ + + V G+ L D LK
Sbjct: 86 VLSAANIAKRGPDEVAHLMTLLETTIAR----QRRDDAEWSLAVAGSLDLLPDRTAHALK 141
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI-----ESGSVCSHDVDSSLIAKY 173
EA D T +L +A Y +EI+ A++ D G+ + D+ + A
Sbjct: 142 EAIDAT-AGRPRSLTLAIGYDPHEEIAAAVRAHLADAADDAGRPGATLT-DLARAFDADD 199
Query: 174 LDTSDVP---DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
LD + +P D DL+IRT GE+RLS F W+ A +E VF YWP F R F AL Y
Sbjct: 200 LD-ARIPGGSDIDLVIRTSGERRLSGFFPWRSAGAELVFCDVYWPGFRRLDFLRALRTYA 258
Query: 231 LR 232
R
Sbjct: 259 QR 260
>gi|168186443|ref|ZP_02621078.1| undecaprenyl pyrophosphate synthetase [Clostridium botulinum C str.
Eklund]
gi|169295497|gb|EDS77630.1| undecaprenyl pyrophosphate synthetase [Clostridium botulinum C str.
Eklund]
Length = 214
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 113/230 (49%), Gaps = 21/230 (9%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HIGII DGN RWA GL + G+ G+ + ++G+K +T + F+ +N +R
Sbjct: 4 PNHIGIIPDGNRRWAVENGLTKEKGYNSGLNPGLILFHLCKKIGVKEITYYGFTTDNTKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIG--NRLSLDDDILCVLKEAEDQTRLNT 128
P + K + L+K + + V+G N ++L K +T N
Sbjct: 64 PKIQRQAFSKACVDAVN----LLRKEDADLLVVGDYNSPMFPKELLPFTKR---KTIGNG 116
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
G+ + NY ++ ++++ + + D I +L ++D+ DLIIR
Sbjct: 117 GIKVNFLVNYGWEWDLG--------NLKNNTSTNRDT----ITNHLRSNDISRVDLIIRW 164
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GG +RLS FL Q YS+F + +YWP+F++ F+ AL YN +D GG
Sbjct: 165 GGRRRLSGFLPVQSIYSDFYVVDDYWPNFTKNHFYDALKWYNTQDITLGG 214
>gi|329942495|ref|ZP_08291305.1| di-trans,poly-cis-decaprenylcistransferase [Chlamydophila psittaci
Cal10]
gi|328815405|gb|EGF85393.1| di-trans,poly-cis-decaprenylcistransferase [Chlamydophila psittaci
Cal10]
Length = 173
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 87/157 (55%), Gaps = 4/157 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAAR----GLPRCAGHRKGIEVFNEIVAAAAEVGIKNL 58
AS+ S P H+ IIMDGN RW + R +GH G +V +I+ +A +GI+ L
Sbjct: 11 ASLSMQSLPKHVAIIMDGNRRWYQQHQTQCSVKRSSGHYYGAKVLPKIIESAFSLGIEVL 70
Query: 59 TIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
T+FAFS N+ R E++EL L S L + L +N I++R IGN L+L + +
Sbjct: 71 TLFAFSTENFLRSAEEVAELFSLFHSQLDEQLPYLIENKIRLRCIGNLLALPHYLQKQIS 130
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI 155
+ ++T+ + L +A NY +DE+ RA K + D+
Sbjct: 131 KVAEETQGHGIRELVLAINYGGKDELVRAFKKLHHDL 167
>gi|156083825|ref|XP_001609396.1| undecaprenyl pyrophosphate synthetase [Babesia bovis T2Bo]
gi|154796647|gb|EDO05828.1| undecaprenyl pyrophosphate synthetase, putative [Babesia bovis]
Length = 229
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 109/208 (52%), Gaps = 13/208 (6%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGN R+A G+ GHR G+ E++ +GIK +T++AFS+ N++R +E++
Sbjct: 1 MDGNRRFARLMGMEVHKGHRCGLNKLMEVIEMCQLLGIKVITVYAFSLQNFQRSETEVNN 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE---DQTRLNTGLNLFI 134
++ L K K ++ G+ L + + L+EAE D+ + + + +
Sbjct: 61 IINLATETAKSRLQPGHKQTFAIKFHGDMRFLPEYLRKTLQEAEELSDKLKTEDQILVNV 120
Query: 135 AFNYSSRDEISRA---IKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+Y R+EI+RA I NI D +H+ ++ L L + P+++IRT G
Sbjct: 121 CVSYGGRNEIARAKEKIANIPGDR------THEEEAKLFYSLLVGGEYKPPEILIRTSGV 174
Query: 192 KRLSDFLLWQVA-YSEFVFIPEYWPDFS 218
RLSDFL++Q + ++ F F+ + WP+ S
Sbjct: 175 TRLSDFLIYQCSEFTTFYFLHDTWPELS 202
>gi|22213589|gb|AAM92882.1| cis-prenyltransferase 3 [Hevea brasiliensis]
gi|22213597|gb|AAM92886.1| cis-prenyltransferase 7 [Hevea brasiliensis]
gi|193876217|gb|ACF24746.1| cis-prenyl transferase II [Hevea brasiliensis]
gi|193876219|gb|ACF24747.1| cis-prenyl transferase II [Hevea brasiliensis]
Length = 296
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 119/244 (48%), Gaps = 35/244 (14%)
Query: 4 SMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
S+++ P P H+ IMDGN R+A + G++ G + E+G++ +TI+A
Sbjct: 25 SILTQGPIPTHLAFIMDGNRRFAKKHKMKEAEGYKAGYLALLRTLTYCYELGVRYVTIYA 84
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNN---IKVRVIGNRLSLDDDILCVLKE 119
FSI+N+RR E+ ++ L+ +++ N + VR++GN LD+ I ++
Sbjct: 85 FSIDNFRRQPREVQCVMNLMMEKIEEIIVEESIMNAYDVGVRIVGNLNLLDEPIRIAAEK 144
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD-IESGSVCSHDVDSSLIAKY----- 173
T N+ L IA YSS DEI A++ +D + S VC++ +++ K
Sbjct: 145 IMRATANNSRFVLLIAVAYSSTDEIVHAVEESSKDKLNSNEVCNNGIEAEQEFKEANGTG 204
Query: 174 --------------LDTSDV-------PDPDLIIRTGGEKRLSDFLLWQ----VAYSEFV 208
++ +D+ P PD++IRT G RLS++LLWQ + YS F
Sbjct: 205 NSVIPVQKTESYSGINLADLEKNTYVNPHPDVLIRTSGLSRLSNYLLWQTSNCILYSPFA 264
Query: 209 FIPE 212
PE
Sbjct: 265 LWPE 268
>gi|148469574|gb|ABQ65716.1| cis-prenyltransferase [Hevea brasiliensis]
Length = 290
Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 115/238 (48%), Gaps = 31/238 (13%)
Query: 5 MMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+++ P P H+ I+DGN R+A LP GH+ G ++ E+G+K TI+AF
Sbjct: 26 ILTQGPIPTHLAFILDGNRRFAKKHKLPEGGGHKAGFLALLNVLTYCYELGVKYATIYAF 85
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEA 120
SI+N+RR E+ ++ L+ ++ + +I VR +GN L + + +
Sbjct: 86 SIDNFRRKPHEVQYVMDLMLEKIEGMIMEESIINAYDICVRFVGNLKLLSEPVKTAADKI 145
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSH----DVDSSLIAKYLDT 176
T N+ L +A Y+S DEI A++ ++ S VC++ + +++ + T
Sbjct: 146 MRATANNSKCVLLLAVCYTSTDEIVHAVEE-SSELNSNEVCNNQELEEANATGSGTVIQT 204
Query: 177 SDV------------------PDPDLIIRTGGEKRLSDFLLWQ----VAYSEFVFIPE 212
++ P PD++IRT GE RLS++LLWQ + YS + PE
Sbjct: 205 ENMESYSGIKLVDLEKNTYINPYPDVLIRTSGETRLSNYLLWQTTNCILYSPYALWPE 262
>gi|28211040|ref|NP_781984.1| undecaprenyl pyrophosphate synthetase [Clostridium tetani E88]
gi|28203479|gb|AAO35921.1| undecaprenyl pyrophosphate synthetase [Clostridium tetani E88]
Length = 220
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 112/229 (48%), Gaps = 19/229 (8%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HIGII DGN RWA + + G++ G++ E+ E+GIK LT + F+ +N +R
Sbjct: 10 PEHIGIIPDGNRRWAVKNNMQKKDGYKYGLQPGFEMYDLCRELGIKELTFYGFTKDNNKR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG- 129
P + +E + + SL K + ++ V+G+ S D L +T+ G
Sbjct: 70 PKDQTTEF----RRACVEAVMSLCKKDAELLVVGDYES--DLFPKELIPFTRRTKFGKGG 123
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ + NY +I +D + G + K + +S++ DLIIR G
Sbjct: 124 IKINFLVNYGWDWDI--------KDYKEGKKLRY----KNTIKNIHSSEISRIDLIIRWG 171
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
G RLS FL Q YS+F I + WPDF +E F+ ALN Y +D GG
Sbjct: 172 GRCRLSGFLPLQTVYSDFYIIDDLWPDFKKEHFYDALNWYQNQDITLGG 220
>gi|323483879|ref|ZP_08089256.1| hypothetical protein HMPREF9474_01005 [Clostridium symbiosum
WAL-14163]
gi|323402833|gb|EGA95154.1| hypothetical protein HMPREF9474_01005 [Clostridium symbiosum
WAL-14163]
Length = 207
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 26/229 (11%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+GII DGN RWA +GL + G+ +GI + ++GIK ++ + F+ +N +R
Sbjct: 4 PEHVGIIPDGNRRWALQKGLNKEDGYERGISPGMSLFHTCQKLGIKEMSFYGFTADNTKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS-LDDDILCVLKEAEDQTRLNTG 129
P + K + +K L + N + V+GN S + L D +
Sbjct: 64 PSVQRLAFTKACVAAVK----VLSEENASLLVVGNTDSAMFPKELLPYTTRRDFGKGGMK 119
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+N + +++ E +KN +I L T+DV DL+IR G
Sbjct: 120 INFLVNYSW----EWDLGLKN-----------------GMIGPKLGTADVSRVDLVIRWG 158
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
G +RLS FL Q YS+F + +YWPDFS A++ Y+ +D GG
Sbjct: 159 GRRRLSGFLPVQSVYSDFYVVDDYWPDFSPRHVEEAISWYSRQDVTLGG 207
>gi|60617766|gb|AAX31281.1| cis-prenyltransferase [Hevea brasiliensis]
Length = 290
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 117/239 (48%), Gaps = 33/239 (13%)
Query: 5 MMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+++ P P H+ I+DGN R+A LP GH+ G ++ E+G+K TI+AF
Sbjct: 26 ILTQGPIPTHLAFILDGNRRFAKKHKLPEGGGHKAGFLALLNVLTYCYELGVKYATIYAF 85
Query: 64 SINNWRRPVSEISELVKL----IKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
SI+N+RR E+ ++ L I +K+ + +I VR +GN L + + +
Sbjct: 86 SIDNFRRKPHEVQYVMDLMLEKIDGMIKEESI-INAYDICVRFVGNLKLLSEPVKTAADK 144
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSH----DVDSSLIAKYLD 175
T N+ L +A Y+S DEI A++ ++ S VC++ + +++ + +
Sbjct: 145 IMRATANNSKCVLLLAVCYTSTDEIVHAVEE-SSELNSNEVCNNQELEEANATGSSTVIQ 203
Query: 176 TSDV------------------PDPDLIIRTGGEKRLSDFLLWQ----VAYSEFVFIPE 212
T ++ P PD++IRT GE RLS++LLWQ + YS + PE
Sbjct: 204 TENMESYSGIKLVDLEKNTYINPYPDVLIRTSGETRLSNYLLWQTTNCILYSPYALWPE 262
>gi|323692883|ref|ZP_08107108.1| Di-trans-poly-cis-decaprenylcistransferase [Clostridium symbiosum
WAL-14673]
gi|323503058|gb|EGB18895.1| Di-trans-poly-cis-decaprenylcistransferase [Clostridium symbiosum
WAL-14673]
Length = 207
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 26/229 (11%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+GII DGN RWA +GL + G+ +GI + ++GIK ++ + F+ +N +R
Sbjct: 4 PEHVGIIPDGNRRWALQKGLNKEDGYERGISPGMSLFRTCQKLGIKEMSFYGFTADNTKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS-LDDDILCVLKEAEDQTRLNTG 129
P + K + +K L + N + V+GN S + L D +
Sbjct: 64 PSVQRLAFTKACVAAVK----VLSEENASLLVVGNTDSAMFPKELLPYTTRRDFGKGGMK 119
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+N + +++ E +KN +I L T+DV DL+IR G
Sbjct: 120 INFLVNYSW----EWDLGLKN-----------------GMIGPKLGTADVSRVDLVIRWG 158
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
G +RLS FL Q YS+F + +YWPDFS A++ Y+ +D GG
Sbjct: 159 GRRRLSGFLPVQSVYSDFYVVDDYWPDFSPRHVEEAISWYSRQDVTLGG 207
>gi|331270100|ref|YP_004396592.1| Di-trans-poly-cis-decaprenylcistransferase [Clostridium botulinum
BKT015925]
gi|329126650|gb|AEB76595.1| Di-trans-poly-cis-decaprenylcistransferase [Clostridium botulinum
BKT015925]
Length = 214
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 115/230 (50%), Gaps = 21/230 (9%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HIGII DGN RWA GL + G+ G+ + ++GIK +T + F+ +N +R
Sbjct: 4 PNHIGIIPDGNRRWAINNGLTKEKGYDSGLNPGLILFRLCKKIGIKEITYYGFTTDNTKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS--LDDDILCVLKEAEDQTRLNT 128
P + K + L K + + V+GN S ++L K +T
Sbjct: 64 PKIQRLAFSKACVDAVN----LLSKEDADLLVVGNYDSPMFPKELLPFTKR---KTFGKG 116
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
G+ + NY ++S N+ ++ S + + IA L ++D+ DLIIR
Sbjct: 117 GIKVNFLVNYGWEWDLS----NLKENTSS--------NRNTIANTLKSNDISRVDLIIRW 164
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GG +RLS FL Q YS+F + +YWP+F+++ F++AL YN +D GG
Sbjct: 165 GGRRRLSGFLPVQSIYSDFYVVDDYWPNFNKDHFYNALKWYNTQDITLGG 214
>gi|328958240|ref|YP_004375626.1| undecaprenyl pyrophosphate synthase [Carnobacterium sp. 17-4]
gi|328674564|gb|AEB30610.1| undecaprenyl pyrophosphate synthase [Carnobacterium sp. 17-4]
Length = 219
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 108/231 (46%), Gaps = 22/231 (9%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGII DGN RWA G + G++ GIE E+ E+GI+ +T + F+++N +R
Sbjct: 8 PKHIGIIPDGNRRWAQENGFKKQEGYKFGIEPGLELYHLCLELGIEEMTFYGFTVDNTKR 67
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS--LDDDILCVLKEAEDQTRLNT 128
P + K + K LK + + V+GN S ++L K +T+
Sbjct: 68 PAEQTKAFQKACVDAVNK----LKDRDADLLVVGNTNSPLFPKELLPYTK----RTKFGK 119
Query: 129 GL-NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
GL + NY +++ IK D + S K + +SD+ DLIIR
Sbjct: 120 GLMKINFLVNYGWNWDLNYGIKQNDFDPKQDST-----------KNIASSDISRMDLIIR 168
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GG +RLS FL Q YS+F E WPD++ AL Y +D GG
Sbjct: 169 WGGRRRLSGFLPIQSIYSDFYVAEEMWPDYNLNQVHAALQWYQDQDITLGG 219
>gi|226322653|ref|ZP_03798171.1| hypothetical protein COPCOM_00425 [Coprococcus comes ATCC 27758]
gi|225208990|gb|EEG91344.1| hypothetical protein COPCOM_00425 [Coprococcus comes ATCC 27758]
Length = 96
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 59/89 (66%)
Query: 153 QDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPE 212
+D G ++ L YLDT +PDPDL+IRT GE RLS++LLWQ+AY+EF F
Sbjct: 3 KDCADGRFAPEEITEELFEGYLDTHGIPDPDLLIRTSGELRLSNYLLWQLAYTEFYFTDV 62
Query: 213 YWPDFSRELFFHALNQYNLRDRRFGGLSK 241
WPDFS+E A+ QYN RDRR+GG+ +
Sbjct: 63 PWPDFSKEELEKAIEQYNSRDRRYGGIKE 91
>gi|170759900|ref|YP_001786718.1| undecaprenyl pyrophosphate synthetase-like protein [Clostridium
botulinum A3 str. Loch Maree]
gi|169406889|gb|ACA55300.1| undecaprenyl pyrophosphate synthetase homolog [Clostridium
botulinum A3 str. Loch Maree]
Length = 215
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 109/230 (47%), Gaps = 20/230 (8%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HIGII DGN RWA +G+ + G++ G+ + VGI +T + F+ +N +R
Sbjct: 4 PNHIGIIPDGNRRWANNKGMEKQCGYKFGLNPGLILFRLCKVVGINEITYYGFTTDNNKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS--LDDDILCVLKEAEDQTRLNT 128
P + K ++ L + + V+GN S ++L KE +
Sbjct: 64 PKVQRESFTKACVEAVE----MLCNEDASLLVVGNTESPMFPKELLPYTKERKVFKEGGI 119
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+N + + + Q +E+ + S + I K++ ++D+ DLIIR
Sbjct: 120 KVNFLVNYGWEWD----------LQALENNKLSSRNK----INKHIKSTDISRVDLIIRW 165
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GG +RLS FL Q YS+F I +YWPDF E + AL Y+ +D GG
Sbjct: 166 GGRRRLSGFLPIQSVYSDFYIIEDYWPDFKSEHLYEALKWYDKQDITLGG 215
>gi|164605016|dbj|BAF98304.1| cis-prenyl transferase [Hevea brasiliensis]
Length = 290
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 118/242 (48%), Gaps = 39/242 (16%)
Query: 5 MMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+++ P P H+ I+DGN R+A LP GH+ G ++ E+G+K TI+AF
Sbjct: 26 ILTQGPIPTHLAFILDGNRRFAKKHKLPEGGGHKAGFLALLNVLTYCYELGVKYATIYAF 85
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEA 120
SI+N+RR E+ ++ L+ ++ + +I VR +GN L + + K A
Sbjct: 86 SIDNFRRKPHEVQYVMDLMLEKIEGMIMEESIINAYDICVRFVGNLKLLSEPV----KTA 141
Query: 121 EDQ----TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSH----DVDSSLIAK 172
DQ T N+ L +A Y+S DEI A++ ++ S VC++ + +++ +
Sbjct: 142 ADQIMRATANNSKCVLLLAVCYTSTDEIVHAVEE-SSELNSNEVCNNQELEEANATGSST 200
Query: 173 YLDTSDV------------------PDPDLIIRTGGEKRLSDFLLWQ----VAYSEFVFI 210
+ T ++ P PD++IR GE RLS++LLWQ + YS +
Sbjct: 201 VIQTENMESYSGIKLVDLEKNTYINPYPDVLIRASGETRLSNYLLWQTTNCILYSPYALW 260
Query: 211 PE 212
PE
Sbjct: 261 PE 262
>gi|302523388|ref|ZP_07275730.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. SPB78]
gi|318059747|ref|ZP_07978470.1| undecaprenyl diphosphate synthase [Streptomyces sp. SA3_actG]
gi|318075794|ref|ZP_07983126.1| undecaprenyl diphosphate synthase [Streptomyces sp. SA3_actF]
gi|302432283|gb|EFL04099.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. SPB78]
Length = 165
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 87/162 (53%), Gaps = 5/162 (3%)
Query: 82 IKSFLKKGFYSLKKNNIKVRVIG-NRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSS 140
++ ++K L I+ R +G + + + + + T N G+ L IAF++
Sbjct: 1 MRHTVRKHAPLLHARGIRCRFLGADDARVPEGLARDFADLTTLTAGNRGMTLTIAFDHGG 60
Query: 141 RDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLW 200
R +I A +++ + V + +V A +L D PD DL+IRT GE+R+S+F+LW
Sbjct: 61 RGDIVAAARSLIR----AGVPAEEVTERSFAAHLPFPDTPDVDLVIRTSGEQRISNFMLW 116
Query: 201 QVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
QVAY+E+VF WPDF F L+ Y R+RRFGG+ +
Sbjct: 117 QVAYAEWVFPTVLWPDFRAPHFLECLHHYRHRERRFGGVPAQ 158
>gi|145607055|ref|XP_361476.2| hypothetical protein MGG_12110 [Magnaporthe oryzae 70-15]
gi|145014659|gb|EDJ99227.1| hypothetical protein MGG_12110 [Magnaporthe oryzae 70-15]
Length = 351
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 133/308 (43%), Gaps = 73/308 (23%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ MDGN R+A + + AGH G E ++ G+K +T+
Sbjct: 30 LIGALRQGPIPRHVAFEMDGNRRYARSHKIETVAGHHMGFEALARVLEICYNCGVKVVTV 89
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N+ RP E+ L+++ K L++ L + +V + G R + D+L +
Sbjct: 90 YAFSIENFNRPKYEVEGLMQMAKYKLEQLLEHGEVLDRYGARVIISGQRDLIPPDVLGFV 149
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKN--------------------IFQDIES 157
A ++T+ N G L I F Y+SR+EI++AI++ I Q I S
Sbjct: 150 DRAVNETKHNKGHILNICFPYTSREEITQAIRSTAVEYSSHPRPQNSAFSQTRIKQKILS 209
Query: 158 ----------GSV----CSHDVDSSLIAKYL-----------DTSDVP----DPDLI--- 185
GS+ DVD S+ + T DVP +P+ I
Sbjct: 210 KHAGNKEAALGSIQESPPPDDVDCSVSSGTTLPPGTPPSSDSTTQDVPRAFKNPETITAE 269
Query: 186 -----------------IRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFFHALN 227
IRT G +RLSDF+LWQ ++ F+ WPDF F L
Sbjct: 270 TLNNHMYTAECPPLDLFIRTSGVERLSDFMLWQCHQDTQIFFLKCLWPDFDLWYFLPVLV 329
Query: 228 QYNLRDRR 235
++ R ++
Sbjct: 330 EWQWRQKQ 337
>gi|170103362|ref|XP_001882896.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164642267|gb|EDR06524.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 282
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 115/236 (48%), Gaps = 25/236 (10%)
Query: 5 MMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++++ P P H+ +MDGN R+A + GH G ++ + ++ ++ +AF
Sbjct: 26 VLAAGPVPRHVAFVMDGNRRYARKQQKQVQEGHVDGYVALRRMLEVCLRLNVQCVSAYAF 85
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEA 120
SI N++R E+ L+KL + L + L + +++ V+G L + + +++A
Sbjct: 86 SIENFKRSEDEVEALMKLAEEKLLELCEHGDILDEYGVRLNVLGRTSLLPEKVQLAVQKA 145
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIES-----------------GSVCSH 163
E TR NT L + Y+SRDEI+ A+++ ++ + GS C
Sbjct: 146 EYMTRHNTRAILNLCMPYTSRDEITTAVESCVRNADPSNPIPATFAGPDRVPDHGSRCPS 205
Query: 164 DVDSSLIAKYL-DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPE-YWPDF 217
S + YL D P D+++RT G KRLSDFLLWQ + I +WPDF
Sbjct: 206 KTFSRQL--YLHDRHPTPPLDILVRTSGVKRLSDFLLWQCCEDTQIQISSTFWPDF 259
>gi|323336297|gb|EGA77568.1| Srt1p [Saccharomyces cerevisiae Vin13]
Length = 343
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 119/239 (49%), Gaps = 16/239 (6%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IMDGN R+A +R LP GH G ++ +G+K ++ +AFSI N+ R
Sbjct: 67 PEHVSFIMDGNRRYAKSRRLPVKKGHEAGGLTLLTLLYICKRLGVKCVSAYAFSIENFNR 126
Query: 71 PVSEISELVKL----IKSFLKKGF-YSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
P E+ L+ L + F K+ Y K+R++G++ L ++ +K+ E+ T+
Sbjct: 127 PKEEVDTLMNLFTVKLDEFAKRAKDYKDPLYGSKIRIVGDQSLLSPEMKKKIKKVEEITQ 186
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
LFI F Y+SR+++ I++ +D ++ Y+ +L+
Sbjct: 187 DGDDFTLFICFPYTSRNDMLHTIRDSVEDHLENKSPRINIRKFTNKMYMGFHS-NKCELL 245
Query: 186 IRTGGEKRLSDFLLWQVAYSEFV-FIPEYWPDFS---------RELFFHALNQYNLRDR 234
IRT G +RLSD++LWQV + + F WP+FS + FF + +YN ++
Sbjct: 246 IRTSGHRRLSDYMLWQVHENATIEFSDTLWPNFSFFAMYLMILKWSFFSTIQKYNEKNH 304
>gi|71662517|ref|XP_818264.1| cis-prenyltransferase [Trypanosoma cruzi strain CL Brener]
gi|70883505|gb|EAN96413.1| cis-prenyltransferase, putative [Trypanosoma cruzi]
Length = 414
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 120/279 (43%), Gaps = 54/279 (19%)
Query: 13 HIGIIMDGNGRWAAARGLP--------------------------RCA------------ 34
H+ +IMDGN R+ L RC+
Sbjct: 135 HLAVIMDGNRRFGELTSLSTVSVDAVTKLCDSILEEKNPPESSVERCSALVSLLRHTTLD 194
Query: 35 GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLK 94
GHR G E E + E I+ LT++AFS NW R E++ L+ L F ++ S +
Sbjct: 195 GHRCGGEKLIEFIDNCLEFNIQMLTVYAFSTENWERSALEVNVLMALFYFFFERVRSSAR 254
Query: 95 KNNIKVRVIG---NRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNI 151
+ I +R I R+ + L +L E E + + + + +YS R+E+ A +
Sbjct: 255 EKGIFIRFISPAFERIPISLRKLMLLVEEESRGHRPRRIVVNVCVSYSGREEVLEACNRL 314
Query: 152 FQ------DIESGSVCSHDVDS-------SLIAKYLDTSDVPDPDLIIRTGGEKRLSDFL 198
+ I + SH + S + A L +P +++RT GE+RLS+F+
Sbjct: 315 LRRVDKSIPISNAEFMSHMLRSITQEGHEAEDATVLADGGGAEPQVLLRTSGEQRLSNFM 374
Query: 199 LWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
L++ AY+EF F + WP+ RE F L ++ R RR G
Sbjct: 375 LYECAYTEFFFTKKTWPEIGREDFIRLLCDFSQRGRRHG 413
>gi|256079777|ref|XP_002576161.1| dehydrodolichyl diphosphate synthase (dedol-pp synthase)
[Schistosoma mansoni]
gi|238661423|emb|CAZ32396.1| dehydrodolichyl diphosphate synthase (dedol-pp synthase), putative
[Schistosoma mansoni]
Length = 277
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 110/226 (48%), Gaps = 39/226 (17%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IMDGN R+A + L + GH G +E + ++GI+ ++IF FSI+N+ R
Sbjct: 27 PKHVAFIMDGNRRFADGKMLKKSDGHLHGFTKLSETLQWCRDIGIEEVSIFTFSIDNFNR 86
Query: 71 PVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
E+S L+ L + L++ + LK ++I +RVIGN L + + + TR
Sbjct: 87 SHEEVSFLMNLAEEKLQELLDNKDELKADDICIRVIGNLALLPAKVQSLAAQLMLVTR-- 144
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
N+S+ D+ L++K L T DL+IR
Sbjct: 145 ---------NHSN-----------------------DITRELLSKCLYTRLSKPLDLLIR 172
Query: 188 TGGEKRLSDFLLWQVAYSE--FVFIPEYWPDFSRELFFHALNQYNL 231
T GE RLSDFL WQV+ ++ + FI YWP+FS F ++ Y +
Sbjct: 173 TSGEIRLSDFLTWQVSENDTIYKFINNYWPEFSWWDFLSSIIHYQM 218
>gi|20090682|ref|NP_616757.1| di-trans-poly-cis-decaprenylcistransferase [Methanosarcina
acetivorans C2A]
gi|19915731|gb|AAM05237.1| di-trans-poly-cis-decaprenylcistransferase [Methanosarcina
acetivorans C2A]
Length = 224
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 112/231 (48%), Gaps = 24/231 (10%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI II DGN RWA RGL + G++ GI E+ ++GI +T F F+ +N +R
Sbjct: 15 PGHIAIIPDGNRRWALDRGLEKHEGYKHGIVPGLELYDICVKIGIGEVTFFGFTQDNTKR 74
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS--LDDDILCVLKEAEDQTRLNT 128
P + V +K+ L K++ ++ V+GN S ++L K +T+
Sbjct: 75 PQIQRKAFVDACIKSVKE----LSKHDAELLVVGNTNSDMFPKELLAYTK----RTKFGK 126
Query: 129 G-LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
G + + NY +++ A +N DS + + + ++++P DL+IR
Sbjct: 127 GKVRINFLVNYGWYWDLTYAFEN-------------SSDSKKMIENIASAEIPRIDLLIR 173
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GG +RLS L Q YS+ + E WPDF E F+AL Y +D GG
Sbjct: 174 WGGRRRLSGMLPVQTVYSDIYVVDEMWPDFKPEHLFNALEFYQDQDITLGG 224
>gi|85000775|ref|XP_955106.1| dehydrodolichyl diphosphate synthase [Theileria annulata strain
Ankara]
gi|65303252|emb|CAI75630.1| dehydrodolichyl diphosphate synthase, putative [Theileria annulata]
Length = 205
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 110/211 (52%), Gaps = 16/211 (7%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M+ M DH+ +IMDGN R+A L + GH G EI+ ++ VG+K +TI
Sbjct: 1 MIFVMKPMLKVDHMALIMDGNRRYAKNLNLQQSQGHLNGFNKLLEILEFSSLVGLKVITI 60
Query: 61 FAFSINNWRRPVSEISELVKLI------KSFLKKGFYSLKKNNIKVRVIGNRLSLDDDIL 114
FAFS+ N+ R EIS+L+ L KS L++ ++ ++R G+ L DI
Sbjct: 61 FAFSLLNFSRTRKEISDLLNLFVDPSGPKSQLEE---LCERIGCRIRFCGDFSFLGQDIK 117
Query: 115 CVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKY- 173
+L + + +T + L + +Y R+EI A+ I ++ S D SL +Y
Sbjct: 118 QILNDVQSKTNHYNKMTLNLCASYGGRNEIINALNKINPKNDTN---SSDF-KSLKEQYY 173
Query: 174 --LDTSDVPDPDLIIRTGGEKRLSDFLLWQV 202
L T D P+L+IRT GE RLSDFL++QV
Sbjct: 174 RNLYTGDFTPPNLLIRTSGESRLSDFLIYQV 204
>gi|182416900|ref|ZP_02948284.1| undecaprenyl pyrophosphate synthetase [Clostridium butyricum 5521]
gi|237667680|ref|ZP_04527664.1| Di-trans-poly-cis-decaprenylcistransferase [Clostridium butyricum
E4 str. BoNT E BL5262]
gi|182379198|gb|EDT76699.1| undecaprenyl pyrophosphate synthetase [Clostridium butyricum 5521]
gi|237656028|gb|EEP53584.1| Di-trans-poly-cis-decaprenylcistransferase [Clostridium butyricum
E4 str. BoNT E BL5262]
Length = 213
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 110/232 (47%), Gaps = 26/232 (11%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGII DGN RWA + + + G+ GI+ ++ + ++ +T + F+++N +R
Sbjct: 4 PKHIGIIPDGNRRWALSNDMTKDMGYSYGIDPGLQVFKLCQKEKVEEVTFYGFTVDNTKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE----AEDQTRL 126
P + K ++ L K N ++ V+GN S C KE E +
Sbjct: 64 PSDQKEAFTKACIESVE----LLTKENCEILVLGNTNSS-----CFPKELLQYTERKVFG 114
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
+ G+ + NY +++ +KN + S I YL + D+ DLII
Sbjct: 115 SGGIKVNFLINYGWEWDLN-LLKN------------PALSKSGIIPYLHSKDISRIDLII 161
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q YS+F I YWP F E F+ AL+ Y+ +D GG
Sbjct: 162 RWGGRRRLSGFLPAQSVYSDFYIINNYWPSFKEEDFYGALSWYDKQDVTLGG 213
>gi|289524565|ref|ZP_06441419.1| di-trans,poly-cis-decaprenylcistransferase [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289502196|gb|EFD23360.1| di-trans,poly-cis-decaprenylcistransferase [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 144
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 79/145 (54%), Gaps = 5/145 (3%)
Query: 97 NIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIE 156
NI++R G L +D+ + AE +T L+L + NY R EI A+ I +
Sbjct: 1 NIRLRFSGRIDKLPEDLRDLALWAEKETEAGDKLDLILCLNYGGRQEIIDAVNKI---LA 57
Query: 157 SGSVCSH--DVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYW 214
+ + C ++D +L DVPDPDLIIRT GEKRLS+F LWQ +YSE F W
Sbjct: 58 AKTDCDDVLEIDEDCFRGHLYLPDVPDPDLIIRTSGEKRLSNFWLWQSSYSELYFTDCLW 117
Query: 215 PDFSRELFFHALNQYNLRDRRFGGL 239
P+F A+ +Y R+RR+GG+
Sbjct: 118 PEFDEGKLREAVEEYQRRERRYGGI 142
>gi|302530104|ref|ZP_07282446.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. AA4]
gi|302438999|gb|EFL10815.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. AA4]
Length = 260
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 111/206 (53%), Gaps = 12/206 (5%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI I++DGN RWA G A GHR G + + ++ E ++ +T++ S +N
Sbjct: 22 PRHIAIMLDGNRRWAREAGFTDVADGHRAGAKKIADFLSWCQEADVEVVTMWLLSTDNLN 81
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E++ L+K+I + + + ++R++G L ++ L A +T ++G
Sbjct: 82 RDPDELTPLLKIITDVTDE--LAGAEAPWRLRIVGALDLLPLEVAQKLTAAAARTENHSG 139
Query: 130 LNLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSH-----DVDSSLIAKYLDTSDVPDPD 183
+ + IA Y R EI+ A++ + Q + G+ DVD I+++L TS PDPD
Sbjct: 140 MEVNIAVGYGGRQEIADAVRKLLLQHADEGTSIRELAKILDVDH--ISEHLYTSGQPDPD 197
Query: 184 LIIRTGGEKRLSDFLL-WQVAYSEFV 208
LIIRT GE+RLS FLL + AY+ F+
Sbjct: 198 LIIRTSGEQRLSGFLLTFGDAYATFI 223
>gi|56206240|emb|CAI21492.1| dehydrodolichyl diphosphate synthase [Homo sapiens]
gi|119628212|gb|EAX07807.1| dehydrodolichyl diphosphate synthase, isoform CRA_b [Homo sapiens]
Length = 240
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 83/139 (59%)
Query: 93 LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIF 152
L+K+ + +RV+G+ L D+ ++ +A T+ L + F Y+SR EIS A++ +
Sbjct: 18 LQKHGVCIRVLGDLHLLPLDLQELIAQAVQATKNYNKCFLNVCFAYTSRHEISNAVREMA 77
Query: 153 QDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPE 212
+E G + D+ SL+ K L T+ P PD++IRT GE RLSDFLLWQ ++S VF P
Sbjct: 78 WGVEQGLLDPSDISESLLDKCLYTNRSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPV 137
Query: 213 YWPDFSRELFFHALNQYNL 231
WP+++ F A+ Q+ +
Sbjct: 138 LWPEYTFWNLFEAILQFQM 156
>gi|323701427|ref|ZP_08113101.1| Di-trans-poly-cis-decaprenylcistransferase [Desulfotomaculum
nigrificans DSM 574]
gi|323533686|gb|EGB23551.1| Di-trans-poly-cis-decaprenylcistransferase [Desulfotomaculum
nigrificans DSM 574]
Length = 217
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 105/229 (45%), Gaps = 21/229 (9%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGII DGN RWA LP+ AG+ GI+ + E+GI +T + F+ +N +R
Sbjct: 9 PKHIGIIPDGNRRWAQLHNLPKHAGYDYGIKPGFTLYETCLELGIPEVTFYGFTQDNTKR 68
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLD-DDILCVLKEAEDQTRLNTG 129
P + K + L + + VIGN S L + R
Sbjct: 69 PAVQKQAFQKACVDAVN----ILANRDASLLVIGNSASPQFPKELLPFTSRQTFGRDLIK 124
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+N + NYS + ++S + N + D+ S+ +K D+ DLIIR G
Sbjct: 125 INFLV--NYSWKWDLSYGLNN---------GPTQDLHESIASK-----DISRIDLIIRWG 168
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
G +RLS FL Q Y++F + E WPDF + F+ AL Y +D GG
Sbjct: 169 GRRRLSGFLPVQSIYADFYIVDELWPDFQLDQFYEALRWYETQDITLGG 217
>gi|322825454|gb|EFZ30404.1| cis-prenyltransferase, putative [Trypanosoma cruzi]
Length = 414
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 120/279 (43%), Gaps = 54/279 (19%)
Query: 13 HIGIIMDGNGRWAAARGLP--------------------------RCA------------ 34
H+ +IMDGN R+ L RC+
Sbjct: 135 HLAVIMDGNRRFGELTSLSTVSVDAVTKLCDSILEEKNPPGSSVERCSALVSLLRHTTLD 194
Query: 35 GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLK 94
GHR G E E + E I+ LT++AFS NW R E++ L+ L F ++ S +
Sbjct: 195 GHRCGGEKLIEFIDNCLEFNIQMLTVYAFSTENWERSALEVNVLMALFYFFFERVRSSAR 254
Query: 95 KNNIKVRVIG---NRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNI 151
+ I +R I R+ + L +L E E + + + + +YS R+E+ A +
Sbjct: 255 EKGIFIRFISPAFERIPISLRKLMLLVEEESRGHRPRRIVVNVCVSYSGREEVLEACNRL 314
Query: 152 FQ------DIESGSVCSHDVDS-------SLIAKYLDTSDVPDPDLIIRTGGEKRLSDFL 198
+ I + SH + S + A L +P +++RT GE+RLS+F+
Sbjct: 315 LRRVDKSIPISNAEFMSHMLRSITQEGHEAEDATVLADGGGAEPQVLLRTSGEQRLSNFM 374
Query: 199 LWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
L++ AY+EF F + WP+ RE F L ++ R RR G
Sbjct: 375 LYECAYTEFFFTKKTWPEIGREDFIRLLCDFSQRGRRQG 413
>gi|302385340|ref|YP_003821162.1| Di-trans,poly-cis-decaprenylcistransferase [Clostridium
saccharolyticum WM1]
gi|302195968|gb|ADL03539.1| Di-trans,poly-cis-decaprenylcistransferase [Clostridium
saccharolyticum WM1]
Length = 207
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 106/232 (45%), Gaps = 32/232 (13%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGII DGN RWA +G+ + AG+ GI + ++GIK +T + F+++N +R
Sbjct: 4 PKHIGIIPDGNRRWAVDKGMGKEAGYENGISPGMVLYHLCRKLGIKEMTFYGFTVDNTKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT-- 128
P + K K L K + ++ V+G S KE + T +
Sbjct: 64 PAVQRDAFSKA----CVKAVEELSKEDAELLVLGKTTSA-----MFPKELKPYTSRHQFG 114
Query: 129 --GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
G+ + NYS ++ HD I L T+DV DL+I
Sbjct: 115 SGGIKINFLVNYSWEWDLGL----------------HD---GAIGPALKTADVSRIDLVI 155
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q YS+ I +YWPDF+ + + A+ Y+ +D GG
Sbjct: 156 RWGGRRRLSGFLPVQSVYSDMYVIDDYWPDFTPQHVYDAIEWYSRQDVTLGG 207
>gi|218197660|gb|EEC80087.1| hypothetical protein OsI_21824 [Oryza sativa Indica Group]
Length = 289
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 103/192 (53%), Gaps = 14/192 (7%)
Query: 52 EVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLS 108
E+G+K +T++AFSI+N++R +E+ L++L++ + + + + K N K+ GN
Sbjct: 80 EMGVKYITVYAFSIDNFKRDPTEVKSLMELMEEKINELLENRNVINKVNCKINFWGNLDM 139
Query: 109 LDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAI-------KNIFQDIESGSVC 161
L + ++ T NTGL + Y+S EI A+ ++I Q ++ SV
Sbjct: 140 LSKSVRVAAEKLMATTAENTGLVFSVCMPYNSTSEIVNAVNKVCAERRDILQREDADSVA 199
Query: 162 SHDVDSSLIAKYLD----TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDF 217
++ V S + LD ++ PDPD++IRT GE RLS+FLLWQ +S WP+F
Sbjct: 200 NNGVYSDISVADLDRHMYSAGCPDPDIVIRTSGETRLSNFLLWQTTFSHLQNPDPLWPEF 259
Query: 218 SRELFFHALNQY 229
S + A+ QY
Sbjct: 260 SFKHLVWAILQY 271
>gi|76664634|emb|CAI77470.1| undecaprenyl pyrophosphate synthetase [Lactobacillus reuteri]
Length = 105
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 57/76 (75%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HI IIMDGNGRWA R LPR AGH++G++ +I AA+E+G+K L+++AFS NW+R
Sbjct: 25 PNHIAIIMDGNGRWAQKRHLPRVAGHKQGMQTVKKITIAASELGVKVLSLYAFSTENWKR 84
Query: 71 PVSEISELVKLIKSFL 86
P SE+S L++L F
Sbjct: 85 PSSEVSYLMQLPVRFF 100
>gi|50304307|ref|XP_452103.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641235|emb|CAH02496.1| KLLA0B12848p [Kluyveromyces lactis]
Length = 361
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 120/233 (51%), Gaps = 26/233 (11%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
MV + P H+ IMDGN R+A P GHR G +I+ + + +++
Sbjct: 71 MVRILRMGPVPRHLSFIMDGNRRYAKKLDQPVKEGHRAGGATLIDILHICRRLNVSSVSA 130
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNN-------IKVRVIGNRLSLDDDI 113
+AFSI N+ R E++ L++L+ ++ + ++ + N I++RV+G+ L +++
Sbjct: 131 YAFSIENFNRSPQEVATLMELLGYYIDQ--FTERATNAKDELYGIRLRVVGDLSLLSEEL 188
Query: 114 LCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIK-------NIFQDIESGSVCSHDVD 166
L ++ AE TR L++A Y+SR++I+ +++ N +DI ++ D
Sbjct: 189 LKKIRNAEKLTRDGQEFVLYLALPYTSRNDIAHSMQVTTDKCINSNEDITEQAL----TD 244
Query: 167 SSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFV-FIPEYWPDFS 218
+ +Y + DL+IRT G RLSD++LWQV + F+ WPDF+
Sbjct: 245 NMYFEQYSNKC-----DLLIRTSGHTRLSDYMLWQVHEGSIIEFVDCLWPDFN 292
>gi|302759659|ref|XP_002963252.1| hypothetical protein SELMODRAFT_404991 [Selaginella moellendorffii]
gi|300168520|gb|EFJ35123.1| hypothetical protein SELMODRAFT_404991 [Selaginella moellendorffii]
Length = 210
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 104/195 (53%), Gaps = 12/195 (6%)
Query: 29 GLPRCAG----HRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKS 84
G PR A R+ I + +++ GIK LT+FAFS N+ RP E+ + ++ +
Sbjct: 13 GSPRSASCEQRRRRAIPTPGRL---SSDWGIKALTLFAFSTENFLRPREEVDQWMQQLDR 69
Query: 85 FLK-KGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDE 143
L ++ + I+ R IG+ L + + +A+ T NTG+ L +A YS ++
Sbjct: 70 VLSLDDPATILLDGIQFRCIGDTARLPRPLQAKISDAQSITSGNTGMKLVMAIGYSGHND 129
Query: 144 ISRAIKNIFQDIESGSVCSHDVDSSLIAKYL----DTSDVPDPDLIIRTGGEKRLSDFLL 199
+ +A + + +++E + ++D +AK L DV P+L++RT G++RLS+F+L
Sbjct: 130 LVQACQALAREVEQAKLAVEEIDQINLAKRLMLGERCEDVGAPELLVRTSGKQRLSNFML 189
Query: 200 WQVAYSEFVFIPEYW 214
W +AYSE VF W
Sbjct: 190 WHLAYSELVFEKMPW 204
>gi|73669833|ref|YP_305848.1| di-trans-poly-cis-decaprenylcistransferase [Methanosarcina barkeri
str. Fusaro]
gi|72396995|gb|AAZ71268.1| di-trans-poly-cis-decaprenylcistransferase [Methanosarcina barkeri
str. Fusaro]
Length = 223
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 112/232 (48%), Gaps = 26/232 (11%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ II DGN RWA ARGL + G+ G+ ++ ++GI +T F F+ +N +R
Sbjct: 14 PRHVAIIPDGNRRWAMARGLEKHEGYDNGVIPGLKVYDICVKIGIDEVTFFGFTQDNTKR 73
Query: 71 PVSEISELV-KLIKSFLKKGFYSLKKNNIKVRVIGNRLS--LDDDILCVLKEAEDQTRLN 127
P + V IKS + + K + ++ V+GN S ++L K +T++
Sbjct: 74 PQIQRKAFVDACIKSVQE-----ISKRDAEILVVGNTDSTIFPKELLAYTK----RTKVG 124
Query: 128 TG-LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
G + + NY +++ A N DS I + + ++++P DL+I
Sbjct: 125 KGKIKINFLINYGWYWDLAYAFDN-------------SSDSKKIVENIASAEIPRIDLLI 171
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS L Q YS+ + E WPDF E F+AL Y +D GG
Sbjct: 172 RWGGRRRLSGMLPVQTVYSDIYVVDEMWPDFKPEHLFNALEFYQEQDITLGG 223
>gi|160939966|ref|ZP_02087312.1| hypothetical protein CLOBOL_04856 [Clostridium bolteae ATCC
BAA-613]
gi|158437110|gb|EDP14876.1| hypothetical protein CLOBOL_04856 [Clostridium bolteae ATCC
BAA-613]
Length = 207
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 106/229 (46%), Gaps = 26/229 (11%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGII DGN RWA +G+ + G+ GI + E+GI ++ + F+ +N +R
Sbjct: 4 PKHIGIIPDGNRRWAKGQGMDKSEGYGHGISPGMSLYRMCRELGIGEMSFYGFTTDNTKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS-LDDDILCVLKEAEDQTRLNTG 129
P ++ + + +++ L K + + V+GN S + L D +
Sbjct: 64 PSAQRQAFTRACVAAVEE----LAKEDASLLVLGNTKSPMFPHELLPFTARHDFGKGGMK 119
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+N + NYS ++ ++D I L T++V DLIIR G
Sbjct: 120 INFLV--NYSWEWDLG------YKD-------------ETIGPGLKTAEVSRIDLIIRWG 158
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
G +RLS FL Q YS+F + +YWPDF RE AL Y +D GG
Sbjct: 159 GRRRLSGFLPVQSVYSDFYVVDDYWPDFKREHVEDALKWYAAQDITLGG 207
>gi|326792335|ref|YP_004310156.1| Di-trans,poly-cis-decaprenylcistransferase [Clostridium lentocellum
DSM 5427]
gi|326543099|gb|ADZ84958.1| Di-trans,poly-cis-decaprenylcistransferase [Clostridium lentocellum
DSM 5427]
Length = 214
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 105/230 (45%), Gaps = 21/230 (9%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ II DGN RWA GL + G+ G+ E + A GI+ LT + F+ +N +R
Sbjct: 4 PKHVAIIPDGNRRWANESGLEKHQGYEHGLNPGVEALRLAKTYGIEELTYYGFTTDNCKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS--LDDDILCVLKEAEDQTRLNT 128
P ++ V + +K ++++ V+GN S ++L KE T
Sbjct: 64 PPVQVKAFVDACIDAIN----LIKNEDVRLLVVGNTQSPMFPSELLPYTKERVAFGTGTT 119
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+N + + + + + G + + + I L + D+ DLIIR
Sbjct: 120 KVNFLVNYGW---------------EWDLGHMHTDTTNRHTIMDCLCSKDISRIDLIIRW 164
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GG RLS L Q Y++F + E WP+FS++ F A+ YN +D GG
Sbjct: 165 GGRNRLSGLLPVQSVYADFYTLDEMWPEFSKDQFSRAIEWYNKQDVTLGG 214
>gi|18310540|ref|NP_562474.1| di-trans, poly-cis-decaprenylcistransferase [Clostridium
perfringens str. 13]
gi|168206784|ref|ZP_02632789.1| putative undecaprenyl diphosphate synthase [Clostridium perfringens
E str. JGS1987]
gi|18145221|dbj|BAB81264.1| probable di-trans,poly-cis- decaprenylcistransferase [Clostridium
perfringens str. 13]
gi|170661785|gb|EDT14468.1| putative undecaprenyl diphosphate synthase [Clostridium perfringens
E str. JGS1987]
Length = 213
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 112/240 (46%), Gaps = 42/240 (17%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+I DGN RWA GL + G+ GIE E+ ++ IK +T + F+ +N +R
Sbjct: 4 PKHIGVIPDGNRRWAVENGLEKDQGYLHGIEPGLELFKLCQKLDIKEITYYGFTTDNTKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYS--------LKKNNIKVRVIGNRLSLDDDILCV-LKEAE 121
P S+ KK F + + ++ VIGN D + LK+
Sbjct: 64 P------------SYQKKAFIDACIKSVELIANEDCELLVIGN---ADSPVFPEELKKYT 108
Query: 122 DQTRLNTG---LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
+T++ G +N + + + D+ C D+ S I + + D
Sbjct: 109 KRTKMGKGGIRVNFLVNYGWE-------------WDLNLLKAC--DIKSKNIYDNIQSKD 153
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+ DL+IR GG +RLS FL Q YS+ I + WP+F+++ FF+AL YN +D GG
Sbjct: 154 ISRIDLLIRWGGRRRLSGFLPVQSVYSDIYIIDDLWPNFNKDHFFNALEWYNDQDITLGG 213
>gi|134299309|ref|YP_001112805.1| di-trans,poly-cis-decaprenylcistransferase [Desulfotomaculum
reducens MI-1]
gi|134052009|gb|ABO49980.1| Di-trans,poly-cis-decaprenylcistransferase [Desulfotomaculum
reducens MI-1]
Length = 219
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 111/231 (48%), Gaps = 23/231 (9%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGII DGN RWA +GL + AG+ GI ++ E+GI +T + F+++N +R
Sbjct: 9 PKHIGIIPDGNRRWAQNQGLAKEAGYDHGITPGFDLYQICLELGIPEITFYGFTVDNTKR 68
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLD---DDILCVLKEAEDQTRLN 127
P + K + L + + VIGN S + + ++ R+
Sbjct: 69 PPVQKKAFQKACVDAVN----ILANRDASLLVIGNHESAQFPKELLPYTTRKIFGSNRIK 124
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+N + NY + ++++A N + +DSS + + + D+ DLIIR
Sbjct: 125 --INFLV--NYGWKWDLNQAFNN------------NSMDSSYFHEKIASKDISRIDLIIR 168
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GG +RLS FL Q Y++F + + WP+F E F+ AL Y +D GG
Sbjct: 169 WGGRRRLSGFLPVQSIYADFYVVEDLWPNFRSEQFYEALMWYQDQDITLGG 219
>gi|114554923|ref|XP_001143997.1| PREDICTED: hypothetical protein isoform 9 [Pan troglodytes]
Length = 263
Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 103/206 (50%), Gaps = 38/206 (18%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A+++ + P P HI IMDGN R+A + R GH +G E + +GI +T+
Sbjct: 16 CANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R SE+ L+ L + S L + L+K+ + +RV+G+ L D+ ++
Sbjct: 76 YAFSIENFKRSKSEVDGLMDLARQKFSRLMEEQEKLQKHGVCIRVLGDLHLLPLDLQELI 135
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+A T+ NY++ D+ SL+ K L T+
Sbjct: 136 AQAVQATK-----------NYNN-----------------------DISESLLDKCLYTN 161
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVA 203
P PD++IRT GE RLSDFLLWQ A
Sbjct: 162 RSPHPDILIRTSGEVRLSDFLLWQKA 187
>gi|156845438|ref|XP_001645610.1| hypothetical protein Kpol_1033p59 [Vanderwaltozyma polyspora DSM
70294]
gi|156116275|gb|EDO17752.1| hypothetical protein Kpol_1033p59 [Vanderwaltozyma polyspora DSM
70294]
Length = 348
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 114/228 (50%), Gaps = 13/228 (5%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M+ + + P+HI IMDGN +A +P GH G +V A +G++ ++
Sbjct: 59 MINIIKTGRVPEHISFIMDGNRTYAKNLNMPIKKGHEAGGITLLSLVYACKRMGVRCVSA 118
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNI-------KVRVIGNRLSLDDDI 113
+AFSI N+ RP E+ L L L + ++++ + K++++G+ + D++
Sbjct: 119 YAFSIENFNRPKDEVDTLNNLFADKLDE--FAIRAKDFQDPLYGAKIKIVGDATMIGDEM 176
Query: 114 LCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAK- 172
+K E T+ L+I + Y+SR++I A++ + + + ++ +
Sbjct: 177 KRRIKRVEKITQDGEDFILYICYPYTSRNDIYHAVQRSVEQTLNNEISKDEITIKHFTEN 236
Query: 173 -YLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFV-FIPEYWPDFS 218
YL+ S DL++RT G KRLSD++LWQ + + F WPDF+
Sbjct: 237 MYLE-SFSNRCDLLVRTSGHKRLSDYMLWQTHENATIDFHSGLWPDFT 283
>gi|46105340|ref|XP_380474.1| hypothetical protein FG00298.1 [Gibberella zeae PH-1]
Length = 363
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 88/157 (56%), Gaps = 3/157 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ MDGN R+A + GH +G E I+ + G+K +T+
Sbjct: 30 LIGALKQGPIPQHVSFEMDGNRRYARNHRMEALEGHHRGFEALARIMEICYKSGVKVVTV 89
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLK---KGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N+ RP E+ L++L K+ L+ K + L + +VRV+G R + +D+L V+
Sbjct: 90 YAFSIENFNRPAREVEGLMELAKTKLEQLTKYGHILDRYGARVRVLGQREMIREDVLQVV 149
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD 154
+A +TR N L I F Y+SR EI+ A+K+ Q+
Sbjct: 150 DKAVARTRHNNKAVLNICFPYTSRAEITTAVKSTVQE 186
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 157 SGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWP 215
SG + + + K++ T++ P D+ +RT G +RLSDF+LWQ ++ FI WP
Sbjct: 269 SGLPNPETITAETLDKHMYTANDPPLDIFVRTSGVERLSDFMLWQCHQDTQIFFIDTLWP 328
Query: 216 DFSRELFFHALNQYNLRDRR 235
DF + F L ++ R ++
Sbjct: 329 DFDLKDFIWILLEWQWRQKQ 348
>gi|237801531|ref|ZP_04589992.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331024391|gb|EGI04447.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 122
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 70/111 (63%)
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L IA NY + +I++A + + +++++G + D+ L+ L T D+P PDL IRTGGE
Sbjct: 5 LQIAANYGGQWDIAQAAQRLAREVQAGHLQPEDITPELLQTCLATGDLPLPDLCIRTGGE 64
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
R+S+FLLWQ+AY+E F +WPDF + AL + R RRFG S++
Sbjct: 65 HRISNFLLWQLAYAELYFSDLFWPDFKHDAMRAALADFASRQRRFGRTSEQ 115
>gi|117626790|gb|ABK51403.1| LLA-66 [Lilium longiflorum]
Length = 308
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 124/252 (49%), Gaps = 24/252 (9%)
Query: 4 SMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+++S P P HI I+DGN R+ L H G I+ E+G++ +T++A
Sbjct: 35 AVLSVGPMPRHIAFILDGNRRYGKKWKLKEGESHNIGFLTLVRILRYCCEMGVEYVTLYA 94
Query: 63 FSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
FSI+N+ R +E+ ++ LI+ L + ++ + ++V IG LD + +
Sbjct: 95 FSIDNFNRKPNEVQYVMNLIRENTQALVRDLDTVNRLGVRVNFIGRLDLLDGPLREAART 154
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD------IESG--SVCSHDVDSSLIA 171
T NT + L++ Y+S +EI ++ +D +E + D++ +
Sbjct: 155 VMKATAGNTRIVLWVCTAYTSTEEIVHGVQGAVEDEWARLRMEGTKREISLEDLEGKM-- 212
Query: 172 KYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPE-YWPDFS-RELFFHALNQY 229
Y + + PDPD++IRT GE RLS+F+LWQ ++ ++ P WPD S R L + L
Sbjct: 213 -YFERN--PDPDILIRTSGETRLSNFVLWQTSFC-LLYAPRCLWPDLSLRHLVWAVL--- 265
Query: 230 NLRDRRFGGLSK 241
L R + L K
Sbjct: 266 -LYQRSYAYLEK 276
>gi|182627107|ref|ZP_02954826.1| putative undecaprenyl diphosphate synthase [Clostridium perfringens
D str. JGS1721]
gi|177907517|gb|EDT70172.1| putative undecaprenyl diphosphate synthase [Clostridium perfringens
D str. JGS1721]
Length = 213
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 109/240 (45%), Gaps = 42/240 (17%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+I DGN RWA GL + G+ GIE E+ ++ IK +T + F+ +N +R
Sbjct: 4 PKHIGVIPDGNRRWAVENGLEKDQGYLHGIEPGLELFKLCQKLDIKEITYYGFTTDNTKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYS--------LKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
P S+ KK F + + ++ VIGN DD +E +
Sbjct: 64 P------------SYQKKAFIDACIKSVELIANEDCELLVIGN-----DDSPVFPEELKK 106
Query: 123 QTRLNT----GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
T+ T G+ + NY D+ C D+ S I + + D
Sbjct: 107 YTKRTTMGKGGIRVNFLVNYGWE-----------WDLNLLKAC--DIKSKNIYDNIQSKD 153
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+ DL+IR GG +RLS FL Q YS+ I + WP+F+++ FF+AL Y +D GG
Sbjct: 154 ISRIDLLIRWGGRRRLSGFLPVQSVYSDIYIIDDLWPNFNKDHFFNALEWYKDQDITLGG 213
>gi|169342881|ref|ZP_02863912.1| putative undecaprenyl diphosphate synthase [Clostridium perfringens
C str. JGS1495]
gi|169299138|gb|EDS81210.1| putative undecaprenyl diphosphate synthase [Clostridium perfringens
C str. JGS1495]
Length = 230
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 112/240 (46%), Gaps = 42/240 (17%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+I DGN RWA GL + G+ GIE E+ ++ IK +T + F+ +N +R
Sbjct: 21 PKHIGVIPDGNRRWAVENGLEKDQGYLHGIEPGLELFKLCQKLDIKEITYYGFTTDNTKR 80
Query: 71 PVSEISELVKLIKSFLKKGFYS--------LKKNNIKVRVIGNRLSLDDDILCV-LKEAE 121
P S+ KK F + + ++ VIGN D + LK+
Sbjct: 81 P------------SYQKKAFIDACIKSVELIANEDCELLVIGN---ADSPVFPEELKKYT 125
Query: 122 DQTRLNTG---LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
+T++ G +N + + + D+ C D+ S I + + D
Sbjct: 126 KRTKMGKGGIRVNFLVNYGWE-------------WDLNLLKAC--DIKSKNIYDNIQSKD 170
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+ DL+IR GG +RLS+FL Q YS+ I + WP+F+++ FF+AL Y +D GG
Sbjct: 171 ISRIDLLIRWGGRRRLSEFLPVQSVYSDIYIIDDLWPNFNKDHFFNALEWYKDQDITIGG 230
>gi|187780037|ref|ZP_02996510.1| hypothetical protein CLOSPO_03633 [Clostridium sporogenes ATCC
15579]
gi|187773662|gb|EDU37464.1| hypothetical protein CLOSPO_03633 [Clostridium sporogenes ATCC
15579]
Length = 215
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 109/230 (47%), Gaps = 20/230 (8%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HIGII DGN RWA +G+ + G+ G+ + GI +T + F+ +N +R
Sbjct: 4 PNHIGIIPDGNRRWANNKGMEKQCGYDFGLNPGLMLFRLCRAAGINEITYYGFTTDNTKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS--LDDDILCVLKEAEDQTRLNT 128
P + K ++ L + + V+GN S ++L K+ +
Sbjct: 64 PKVQRESFTKACIEAVE----MLCNEDASLLVVGNTESPMFPKELLPYTKKRKVFKEGGI 119
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+N + + + + +E+ ++ S + I K++ ++D+ DLIIR
Sbjct: 120 KVNFLVNYGWEWD----------LEALENNNLSSRNK----INKHIKSTDISRVDLIIRW 165
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GG +RLS FL Q YS+F I +YWPDF E F+ AL Y+ +D GG
Sbjct: 166 GGRRRLSGFLPIQSVYSDFYIIEDYWPDFKPEHFYGALKWYDEQDITLGG 215
>gi|182420522|ref|ZP_02643323.2| putative undecaprenyl diphosphate synthase [Clostridium perfringens
NCTC 8239]
gi|182380267|gb|EDT77746.1| putative undecaprenyl diphosphate synthase [Clostridium perfringens
NCTC 8239]
Length = 230
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 111/240 (46%), Gaps = 42/240 (17%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+I DGN RWA GL + G+ GIE E+ ++ IK +T + F+ +N +R
Sbjct: 21 PKHIGVIPDGNRRWAVENGLEKDQGYLHGIEPGLELFKLCQKLDIKEITYYGFTTDNTKR 80
Query: 71 PVSEISELVKLIKSFLKKGFYS--------LKKNNIKVRVIGNRLSLDDDILCV-LKEAE 121
P S+ KK F + + ++ VIGN D + LK+
Sbjct: 81 P------------SYQKKAFIDACIKSVELIANEDCELLVIGN---ADSPVFPEELKKYT 125
Query: 122 DQTRLNTG---LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
+T++ G +N + + + D+ C D+ S I + + D
Sbjct: 126 KRTKMGKGGIRVNFLVNYGWE-------------WDLNLLKAC--DIKSKNIYDNIQSKD 170
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+ DL+IR GG +RLS FL Q YS+ I + WP+F+++ FF+AL Y +D GG
Sbjct: 171 ISRIDLLIRWGGRRRLSGFLPVQSVYSDIYIIDDLWPNFNKDHFFNALEWYKDQDITLGG 230
>gi|213421851|ref|ZP_03354917.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
Length = 135
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 78/134 (58%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA +G R GH+ G + V+ AA GI LT++AFS NW RP E+S
Sbjct: 1 MDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIDALTLYAFSSENWNRPAQEVSA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L L SL ++N+++R+IG+ + + ++++E T NTGL L IA N
Sbjct: 61 LMELFVWALDSEVKSLHRHNVRLRIIGDISRFNSRLQERIRKSEALTAHNTGLTLNIAAN 120
Query: 138 YSSRDEISRAIKNI 151
Y R +I + ++ +
Sbjct: 121 YGGRWDIVQGVRQL 134
>gi|14423546|gb|AAK62455.1|AF387010_1 Unknown protein [Arabidopsis thaliana]
gi|18377518|gb|AAL66925.1| unknown protein [Arabidopsis thaliana]
Length = 221
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 103/201 (51%), Gaps = 26/201 (12%)
Query: 52 EVGIKNLTIFAFSINNWRRPVSEISELVKL----IKSFLKKGFYSLKKNNIKVRVIGNRL 107
E+GIK +TI+AFSI+N+RR E+ ++ L IKS L+K + + I+V IGN
Sbjct: 7 ELGIKYVTIYAFSIDNFRRKPEEVESVMDLMLEKIKSLLEKESI-VHQYGIRVYFIGNLA 65
Query: 108 SLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIK----NIFQDIESGSVCSH 163
L+D + ++ T N+ + L I Y+S DEI +A+K N +IE+ +
Sbjct: 66 LLNDQVRAAAEKVMKATAKNSRVVLLICIAYNSTDEIVQAVKKSCINKSDNIEASNYKHE 125
Query: 164 DVDSSL----------------IAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEF 207
D DS + I + + S P+PD++IR+ GE RLS+FLLWQ ++
Sbjct: 126 DSDSDIEGTDMENQEKKIQLVDIEENMQMSVAPNPDILIRSSGETRLSNFLLWQTGNTQL 185
Query: 208 VFIPEYWPDFS-RELFFHALN 227
WP+ R L + LN
Sbjct: 186 CSPAALWPEIGLRHLLWAILN 206
>gi|157866080|ref|XP_001681746.1| cis-prenyltransferase-like protein [Leishmania major]
gi|68125045|emb|CAJ02376.1| cis-prenyltransferase-like protein [Leishmania major strain
Friedlin]
Length = 391
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 117/244 (47%), Gaps = 31/244 (12%)
Query: 23 RWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLI 82
R+AA GHR G E E++ + I +T++AFS +NW RP +E+ L+ L
Sbjct: 149 RFAAVIQHSSLVGHRLGGEKLLEVIKHSMAAHIDMVTVYAFSTDNWNRPAAEVDALISLF 208
Query: 83 KSFLKKGFYSLKKNNIKVRVIGNR-LSLDDDILCVLKEAEDQTRLNTG--LNLFIAFNYS 139
F + + +I VR I L + ++ E +TR L L I +YS
Sbjct: 209 FFFFDRIRKEALERHIFVRFISTEPFRLPPRAVEFMRSVERETRAVQPRRLVLNICVSYS 268
Query: 140 SRDEI----SRAIKNIFQD-IESGSVCSHDVDSSLIAKYLD-------TSDVPD------ 181
+ E+ +R + +D + GS + V + + K LD T D +
Sbjct: 269 GQSEVLAACNRLVARRLRDSTDPGSAAA--VATEVTKKELDREMLRSITQDEHEAEDAHI 326
Query: 182 --------PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
P+LIIRT GE+R+S+FLL++ AYSEFVF+ + WP+ ++E AL + R+
Sbjct: 327 FGGGASVEPELIIRTSGEQRISNFLLYECAYSEFVFLDKAWPEVTQEDIRQALADFARRE 386
Query: 234 RRFG 237
+R G
Sbjct: 387 KRKG 390
>gi|302660453|ref|XP_003021906.1| hypothetical protein TRV_03995 [Trichophyton verrucosum HKI 0517]
gi|291185825|gb|EFE41288.1| hypothetical protein TRV_03995 [Trichophyton verrucosum HKI 0517]
Length = 292
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 121/236 (51%), Gaps = 29/236 (12%)
Query: 1 MVASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
++ +++ P P HI II DGN RWA + L I+ ++GI+ +T
Sbjct: 19 LLMNIVQQGPVPKHIAIIADGNRRWAKSSEL--------------NILDLFFDIGIECVT 64
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFY-SLKKNNIKVRVIGNRLSLDDDILCVLK 118
+ FSI N++RP ++ +L+ + +++++K S K I+ RV+G L + I +++
Sbjct: 65 AYLFSIENFKRPKEQVDDLMDIFETWIQKYLSPSPNKRKIRFRVLGRLELLPEKIRKLIE 124
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIES-------GSVCSHDVDSSLIA 171
+ ++T + F+Y+SRDE++RAI+ ++ G + + +D+++
Sbjct: 125 KLVEKTADYDEGTFNVCFSYTSRDEMARAIEMTVRNYNESPKNGGKGKITAETIDNNM-- 182
Query: 172 KYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPE-YWPDFSRELFFHAL 226
D + P D++IRT G RLSDFLLWQ + + + +WP F F A+
Sbjct: 183 ---DICNDPPLDVLIRTSGVCRLSDFLLWQCHRDTVIEVLDIHWPGFRYWHLFLAV 235
>gi|110800504|ref|YP_696243.1| putative undecaprenyl diphosphate synthase [Clostridium perfringens
ATCC 13124]
gi|168213527|ref|ZP_02639152.1| putative undecaprenyl diphosphate synthase [Clostridium perfringens
CPE str. F4969]
gi|110675151|gb|ABG84138.1| putative undecaprenyl diphosphate synthase [Clostridium perfringens
ATCC 13124]
gi|170714909|gb|EDT27091.1| putative undecaprenyl diphosphate synthase [Clostridium perfringens
CPE str. F4969]
Length = 213
Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 110/240 (45%), Gaps = 42/240 (17%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+I DGN RWA GL + G+ GIE E+ ++ IK +T + F+ +N +R
Sbjct: 4 PKHIGVIPDGNRRWAVENGLEKDQGYLHGIEPGLELFKLCQKLDIKEITYYGFTTDNTKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYS--------LKKNNIKVRVIGNRLSLDDDILCV-LKEAE 121
P S+ KK F + + ++ VIGN D + LK+
Sbjct: 64 P------------SYQKKAFIDACIKSVELIANEDCELLVIGN---ADSPVFPEELKKYT 108
Query: 122 DQTRLNTG---LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
+T + G +N + + + D+ C D+ S I + + D
Sbjct: 109 KRTTMGKGGIRVNFLVNYGWE-------------WDLNLLKAC--DIKSKNIYDNIQSKD 153
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+ DL+IR GG +RLS FL Q YS+ I + WP+F+++ FF+AL Y +D GG
Sbjct: 154 ISRIDLLIRWGGRRRLSGFLPVQSVYSDIYIIDDLWPNFNKDHFFNALEWYKDQDITLGG 213
>gi|170763909|ref|ZP_02634995.2| putative undecaprenyl diphosphate synthase [Clostridium perfringens
B str. ATCC 3626]
gi|170712474|gb|EDT24656.1| putative undecaprenyl diphosphate synthase [Clostridium perfringens
B str. ATCC 3626]
Length = 230
Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 112/233 (48%), Gaps = 28/233 (12%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+I DGN RWA GL + G+ GIE E+ ++ IK +T + F+ +N +R
Sbjct: 21 PKHIGVIPDGNRRWAVENGLEKDQGYLHGIEPGLELFKLCQKLDIKEITYYGFTTDNTKR 80
Query: 71 P-VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCV-LKEAEDQTRLNT 128
P +++ + IKS + + ++ VIGN D + LK+ +T +
Sbjct: 81 PSYQKMAFIDACIKSV-----ELIANEDCELLVIGNA---DSPVFPEELKKYTKRTTMGK 132
Query: 129 G---LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
G +N + + + D+ C D+ S I + + D+ DL+
Sbjct: 133 GGIRVNFLVNYGWE-------------WDLNLLKAC--DIKSKNIYDNIQSKDISRIDLL 177
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
IR GG +RLS FL Q YS+ I + WP+F+++ FF+AL Y +D GG
Sbjct: 178 IRWGGRRRLSGFLPVQSVYSDIYIIDDLWPNFNKDHFFNALEWYKDQDITLGG 230
>gi|154333782|ref|XP_001563146.1| cis-prenyltransferase-like protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134060158|emb|CAM45565.1| cis-prenyltransferase-like protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 393
Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 110/229 (48%), Gaps = 26/229 (11%)
Query: 35 GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLK 94
GHR G E E++ E I +T++AFS +NW RP +E+ L+ L F +
Sbjct: 164 GHRVGGEKLLEVINFCMEARISIMTVYAFSTDNWNRPAAEVDALMLLFFFFFDRIQKVAL 223
Query: 95 KNNIKVRVIGNR-LSLDDDILCVLKEAEDQTRLNTG--LNLFIAFNYSSRDEISRAIKNI 151
+I VR I L ++ ++ E +TR L L I +YS + E+ A +
Sbjct: 224 DRHIFVRFISTEPCRLPPRVVEFMRTVEGETRAVQPRRLVLNICVSYSGQSEVVAACNRL 283
Query: 152 F-------QDIESGS----VCSHDVDSSLIAKYL-DTSDVPD-----------PDLIIRT 188
D + + V D+D ++ D + D P+LI+RT
Sbjct: 284 LARRLRDSTDPAAAAIGTEVTKADLDQEMLRSITQDEHEAEDAQVFGGDVSVEPELILRT 343
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
GE+R+S+FLL++ AYSEFVF+ + WP+ ++E AL+ + RD+R G
Sbjct: 344 SGEQRMSNFLLYECAYSEFVFLNKTWPEVTQEDIQQALSDFACRDKRRG 392
>gi|78042817|ref|YP_359109.1| putative undecaprenyl diphosphate synthase [Carboxydothermus
hydrogenoformans Z-2901]
gi|77994932|gb|ABB13831.1| putative undecaprenyl diphosphate synthase [Carboxydothermus
hydrogenoformans Z-2901]
Length = 213
Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 107/230 (46%), Gaps = 28/230 (12%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGII DGN RWA A+G+ + G+ GI+ + +GI LT + F+++N +R
Sbjct: 10 PKHIGIIPDGNRRWAEAQGMTKEKGYFFGIDPGIRLYELCLALGIPELTFYGFTVDNTKR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS--LDDDILCVLKEAEDQTRLNT 128
P + K +K+ L + + + V+GN S ++L ++ + +
Sbjct: 70 PNYQRDAFRKACVEAVKR----LSQRDSALLVVGNTSSPQFPPELLPYTQKRTVFGKGSV 125
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+N + NY + ++ + L ++D+ DLIIR
Sbjct: 126 KVNFLV--NYGWKWDLEHLAQGF--------------------SALPSADISRVDLIIRW 163
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GG +RLS FL Q Y++F I +YWPDF E + AL+ Y +D GG
Sbjct: 164 GGRRRLSGFLPIQSIYADFYVIDDYWPDFKDEHLYQALSWYQEQDITLGG 213
>gi|15239358|ref|NP_200859.1| undecaprenyl pyrophosphate synthetase family protein / UPP
synthetase family protein [Arabidopsis thaliana]
gi|93117611|sp|Q8LAR7|DDPS8_ARATH RecName: Full=Dehydrodolichyl diphosphate synthase 8;
Short=Dedol-PP synthase 8
gi|332009955|gb|AED97338.1| dehydrodolichyl diphosphate synthase 8 [Arabidopsis thaliana]
Length = 272
Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 4/211 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P +I IMDGN R+A R L AGHR G I+ E+G+ +T++AF ++N++
Sbjct: 36 PTNISFIMDGNRRFAKKRNLEGLDAGHRAGFISVKYILQYCKEIGVPYVTLYAFGMDNFK 95
Query: 70 RPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
R E+ ++ L+ ++ S N +++ G+ SL++ K+ + T
Sbjct: 96 RGPEEVKCVMDLMLEKVELTIDQAVSGNMNGVRIIFAGDLNSLNERFRAATKKLMELTEE 155
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N L + + YS+ EI A+++ S ++ S I + + TS VP PDL++
Sbjct: 156 NRDLIVVVCVAYSTSVEIVHAVRDSCVRKSKTGDGSSALELSDIEECMYTSVVPVPDLVV 215
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDF 217
RTGG RLS+F+ WQ + + WP+
Sbjct: 216 RTGGGDRLSNFMTWQTSRALLHRTEALWPEL 246
>gi|9757753|dbj|BAB08234.1| undecaprenyl pyrophosphate synthetase-like protein [Arabidopsis
thaliana]
Length = 251
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 4/211 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P +I IMDGN R+A R L AGHR G I+ E+G+ +T++AF ++N++
Sbjct: 15 PTNISFIMDGNRRFAKKRNLEGLDAGHRAGFISVKYILQYCKEIGVPYVTLYAFGMDNFK 74
Query: 70 RPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
R E+ ++ L+ ++ S N +++ G+ SL++ K+ + T
Sbjct: 75 RGPEEVKCVMDLMLEKVELTIDQAVSGNMNGVRIIFAGDLNSLNERFRAATKKLMELTEE 134
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N L + + YS+ EI A+++ S ++ S I + + TS VP PDL++
Sbjct: 135 NRDLIVVVCVAYSTSVEIVHAVRDSCVRKSKTGDGSSALELSDIEECMYTSVVPVPDLVV 194
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDF 217
RTGG RLS+F+ WQ + + WP+
Sbjct: 195 RTGGGDRLSNFMTWQTSRALLHRTEALWPEL 225
>gi|325288645|ref|YP_004264826.1| Di-trans,poly-cis-decaprenylcistransferase [Syntrophobotulus
glycolicus DSM 8271]
gi|324964046|gb|ADY54825.1| Di-trans,poly-cis-decaprenylcistransferase [Syntrophobotulus
glycolicus DSM 8271]
Length = 194
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 107/208 (51%), Gaps = 22/208 (10%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HIGII DGN RWA +GL + G+ G+ E++ + ++G+K LT + F+++N +R
Sbjct: 4 PNHIGIIPDGNRRWAQGKGLSKEKGYAYGLHPGLELLRLSQKLGVKELTFYGFTVDNTKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS--LDDDILCVLKEAEDQTRLNT 128
P ++ K + + + + ++ + VIGN S +++ + E +
Sbjct: 64 PANQ----TKAFQQACIEAIHCIADEDVSLLVIGNTESKMFPRELMPL---TERKIFGQG 116
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
G+ + NY +++ +++ Q ESG + L ++D+ DL+IR
Sbjct: 117 GMKVNFLVNYGWEWDLANLLRDSAQ--ESGIISG-----------LKSNDISRIDLVIRW 163
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPD 216
GG +RLS FL Q Y++F + +YWPD
Sbjct: 164 GGRRRLSGFLPAQSVYADFFILDDYWPD 191
>gi|302874890|ref|YP_003843523.1| Di-trans-poly-cis-decaprenylcistransferase [Clostridium
cellulovorans 743B]
gi|307690493|ref|ZP_07632939.1| Di-trans-poly-cis-decaprenylcistransferase [Clostridium
cellulovorans 743B]
gi|302577747|gb|ADL51759.1| Di-trans-poly-cis-decaprenylcistransferase [Clostridium
cellulovorans 743B]
Length = 213
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 111/233 (47%), Gaps = 28/233 (12%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGII DGN R+A A+G+ + G+ GI+ + + G++ +T + F+ +N +R
Sbjct: 4 PRHIGIIPDGNRRYAVAKGMSKEKGYDLGIDPGLTVFKLCKQYGVEEITFYGFTTDNTKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS--LDDDILCVLKE---AEDQTR 125
P + K ++ L + + V+GN S +++L K + +
Sbjct: 64 PREQRLAYTKACIDAVR----LLTNEDADLLVVGNTESPMFPEELLAFTKRNAFGSGRIK 119
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
+N +N ++ ++ ++ KNI ++I+S +D+ DLI
Sbjct: 120 VNFLVNYGWEWDLNNLKTLNDGRKNITKNIKS-------------------NDISRVDLI 160
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
IR GG +RLS FL Q YS+F + +YWPDF E F A+ Y +D GG
Sbjct: 161 IRWGGRRRLSGFLPVQSIYSDFYVVDDYWPDFKAEHFTEAIEWYQSQDVTLGG 213
>gi|154321075|ref|XP_001559853.1| hypothetical protein BC1G_01412 [Botryotinia fuckeliana B05.10]
gi|150851950|gb|EDN27142.1| hypothetical protein BC1G_01412 [Botryotinia fuckeliana B05.10]
Length = 353
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 83/157 (52%), Gaps = 3/157 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ +MDGN R+A + + GH G E I+ + G+K +T+
Sbjct: 30 LIGALRQGPIPQHVAFVMDGNRRFARSHKIETVEGHNLGFEALARILEVCYKSGVKVVTV 89
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+++ K L + L + VRV+G R + DD+L +
Sbjct: 90 YAFSIENFKRSKYEVDALMEMAKVKLVQLAQHGDLLDRYGASVRVLGQRNLVKDDVLEAI 149
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD 154
A D T+ N L I F Y+SRDEI+ AIK +D
Sbjct: 150 DRAVDMTKSNGDCALNICFPYTSRDEITTAIKTTVED 186
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Query: 144 ISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVA 203
IS +F D ES S+ + + L T+ P DL+IRT G RLSDF+LWQ
Sbjct: 250 ISSPEAGVFPDPESISI-------DTLEENLFTAGDPPLDLLIRTSGVNRLSDFMLWQCH 302
Query: 204 Y-SEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
+E VF+ WP+F F L ++ + +
Sbjct: 303 EDTEIVFLDCLWPEFDLWQFLPVLVEWQWKQK 334
>gi|255947692|ref|XP_002564613.1| Pc22g05810 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591630|emb|CAP97869.1| Pc22g05810 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 403
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ +MDGN R+A + G+ GH G E I+ + G+K +TI
Sbjct: 31 LIGALKQGPVPQHVAFVMDGNRRFARSHGIETVEGHNLGFEALARILEVCYKSGVKVVTI 90
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+++ K L + L + KVRV+G L D+L +
Sbjct: 91 YAFSIENFKRSKFEVDALMEMAKVKLSQMAQHGDLLDRYGAKVRVLGRLDMLKPDVLEAV 150
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD 154
+A D T N L I F Y+SRDEI+ AI++ +D
Sbjct: 151 NKAVDMTSRNGDRVLNICFPYTSRDEITSAIRDTVED 187
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 160 VCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQV-AYSEFVFIPEYWPDF 217
+ + + ++ T P D++IRT G +RLSDF+LWQ +E VF+ WP+F
Sbjct: 291 ISPETISRQTLNDHMLTKGTPPLDILIRTSGVERLSDFMLWQTHENTEIVFLNVMWPEF 349
>gi|145630004|ref|ZP_01785786.1| UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
[Haemophilus influenzae R3021]
gi|144984285|gb|EDJ91708.1| UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
[Haemophilus influenzae R3021]
Length = 180
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 69/118 (58%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
++ P H+ IIMDGNGRWA + R GH G+ + VA A ++G++ LT++AFS
Sbjct: 6 QTNIPKHVAIIMDGNGRWAKQKNKMRIFGHTNGVTAVRKAVAYARQIGVEVLTLYAFSSE 65
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP EIS L+ L L + L KNNI +++IG+ + + +K+AE+ T
Sbjct: 66 NWSRPEQEISTLMSLFMQALDREVKKLHKNNICLKIIGDVSRFSETLQEKIKKAENLT 123
>gi|85077739|ref|XP_956051.1| hypothetical protein NCU03460 [Neurospora crassa OR74A]
gi|28917094|gb|EAA26815.1| hypothetical protein NCU03460 [Neurospora crassa OR74A]
Length = 359
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 87/163 (53%), Gaps = 3/163 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ +MDGN R+A + + GH G E ++ + G++ +T+
Sbjct: 30 LIGALKQGPVPRHVAFVMDGNRRYARSHKIETIEGHHLGFEALARVLEICYKCGVEVVTV 89
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N+ RP E+ L++L K L++ L++ VRV+G R L DD+L V+
Sbjct: 90 YAFSIENFNRPKYEVDGLMQLAKVKLEQLIQHGELLERYGASVRVLGERDLLSDDVLEVI 149
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSV 160
A T+ N L I F Y+SR+E++ AI++ ++ S
Sbjct: 150 DRAVSTTKNNKKCILNICFPYTSREEMTTAIRSTVEEYSKSSA 192
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 164 DVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELF 222
++ + I K++ T+D P D+ +RT G +RLSDF+LWQ ++ F+ +WP+F F
Sbjct: 273 NITTETIDKHMYTADCPPLDIFVRTSGVERLSDFMLWQCHQDTQMFFLKCFWPEFDLRHF 332
Query: 223 FHALNQYNLRDRR 235
L ++ R ++
Sbjct: 333 LPVLLEWQWRQKK 345
>gi|110803373|ref|YP_698846.1| undecaprenyl diphosphate synthase [Clostridium perfringens SM101]
gi|110683874|gb|ABG87244.1| putative undecaprenyl diphosphate synthase [Clostridium perfringens
SM101]
Length = 213
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 111/241 (46%), Gaps = 44/241 (18%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+I DGN RWA GL + G+ GI+ E+ ++ IK +T + F+ +N +R
Sbjct: 4 PKHIGVIPDGNRRWAVENGLEKDQGYLNGIKPGLELFKLCQKLDIKEITYYGFTTDNTKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYS--------LKKNNIKVRVIGNRLS--LDDDILCVLKEA 120
P S+ KK F + + ++ VIGN S +D LK+
Sbjct: 64 P------------SYQKKAFIDACIKSVELIANEDCELLVIGNADSPVFPED----LKKY 107
Query: 121 EDQTRLNTG---LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+T + G +N + + + D+ C D+ S I + +
Sbjct: 108 TKRTTIGKGGIRVNFLVNYGWE-------------WDLNLLKAC--DIKSKNIYDNIQSK 152
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
D+ DL+IR GG +RLS FL Q YS+ I + WP+F+++ FF+AL Y +D G
Sbjct: 153 DISRIDLLIRWGGRRRLSGFLPVQSVYSDIYIIDDLWPNFNKDHFFNALEWYKDQDITLG 212
Query: 238 G 238
G
Sbjct: 213 G 213
>gi|21593244|gb|AAM65193.1| undecaprenyl diphosphate synthase [Arabidopsis thaliana]
Length = 272
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 4/211 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P +I IMDGN R+A R L AGHR G I+ E+G+ +T++AF ++N++
Sbjct: 36 PTNISFIMDGNRRFAKKRNLEGLDAGHRAGFISVKYILQYCKEIGVPYVTLYAFGMDNFK 95
Query: 70 RPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
R E+ ++ L+ ++ S N +++ G+ SL++ K+ + T
Sbjct: 96 RGPEEVKCVMDLMLEKVELTIDQAVSGNMNGVRIIFAGDLNSLNERFRAATKKLMELTEE 155
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N L + + YS+ EI A+++ S ++ S I + + TS VP PDL++
Sbjct: 156 NRDLIVVVCVAYSTSVEIVHAVRDSCVRKSKTGDGSSALELSDIEECMYTSVVPVPDLMV 215
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDF 217
RTGG RLS+F+ WQ + + WP+
Sbjct: 216 RTGGGDRLSNFMTWQTSRALLHRTEALWPEL 246
>gi|297793607|ref|XP_002864688.1| undecaprenyl pyrophosphate synthetase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297310523|gb|EFH40947.1| undecaprenyl pyrophosphate synthetase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 272
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 107/214 (50%), Gaps = 10/214 (4%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P +I IMDGN R+A R L AGHR G I+ E+G+ +T++AF ++N++
Sbjct: 36 PTNISFIMDGNRRFAKKRNLEGLDAGHRAGFISVKYILQYCKEIGVPYVTLYAFGMDNFK 95
Query: 70 RPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
R E+ ++ L+ ++ S N +++ G+ SL++ ++ T
Sbjct: 96 RGPEEVKCVMDLMLEKVELTIDQAVSGNMNGVRIIFAGDLNSLNERFRAATQKLMKLTEE 155
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIF---QDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
N L + + YS+ EI A+++ I GSV ++ S I + + TS VP PD
Sbjct: 156 NRDLIVVVCVAYSTSVEIVHAVRDSCVRKSKIGDGSVA---LELSDIEECMYTSVVPVPD 212
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDF 217
L+IRTGG RLS+F+ WQ + S WP+
Sbjct: 213 LVIRTGGGDRLSNFMTWQTSKSLLHRTEALWPEL 246
>gi|289616972|emb|CBI56301.1| unnamed protein product [Sordaria macrospora]
Length = 359
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 87/163 (53%), Gaps = 3/163 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ +MDGN R+A + + GH G E ++ + G++ +T+
Sbjct: 30 LIGALKQGPIPRHVAFVMDGNRRYARSHKIETIEGHHLGFEALARVLEICYKCGVEVVTV 89
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N+ RP E+ L++L K L++ L++ VRV+G R L DD+L V+
Sbjct: 90 YAFSIENFNRPKYEVDGLMQLAKVKLEQLIQHGELLERYGASVRVLGERDLLSDDVLEVI 149
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSV 160
A T+ N L I F Y+SR+E++ AI++ ++ S
Sbjct: 150 DRAVSTTKNNKKCILNICFPYTSREEMTTAIRSTVEEYSKSSA 192
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 162 SHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRE 220
+ ++ + I K++ T+D P D+ +RT +RLSDF+LWQ ++ F+ +WP+F
Sbjct: 271 AENITAETIDKHMYTADCPPLDMFVRTSDVERLSDFMLWQCHQDTQMFFLKCFWPEFDLR 330
Query: 221 LFFHALNQYNLRDRR 235
F L ++ R ++
Sbjct: 331 HFLPVLLEWQWRQKK 345
>gi|322710526|gb|EFZ02100.1| undecaprenyl diphosphate synthase family protein [Metarhizium
anisopliae ARSEF 23]
Length = 357
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 86/157 (54%), Gaps = 10/157 (6%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ MDGN R+A + + GH +G E A A G+K +T+
Sbjct: 29 LIGALRQGPVPQHVAFEMDGNRRYARSHRMETVEGHHRGFE-------ALARCGVKVITV 81
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKK-GFYS--LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFS+ N+ RP E+ L++L K L++ Y L + VRV+G R + +D+L V+
Sbjct: 82 YAFSVENYNRPKHEVEGLMQLAKVKLEQLTTYGDILDRYGACVRVLGQREMIREDVLKVV 141
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD 154
+A +T+ N L I F Y+SR EI+ AI+N QD
Sbjct: 142 DKAVARTKHNNKTVLNICFPYTSRAEITTAIRNTVQD 178
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 165 VDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFF 223
+ + + ++ T+ P +L +RT G +RLSDF+LWQ ++ VFI WPDF + F
Sbjct: 267 ITTDTLNDHMYTASDPPLELFVRTSGVERLSDFMLWQCHQDTQIVFIDCLWPDFDLQHFI 326
Query: 224 HALNQYNLRDRR 235
+ ++ R ++
Sbjct: 327 WVMLEWQWRQKQ 338
>gi|207342321|gb|EDZ70113.1| YMR101Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 268
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 114/231 (49%), Gaps = 16/231 (6%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGN R+A +R LP GH G ++ +G+K ++ +AFSI N+ RP E+
Sbjct: 1 MDGNRRYAKSRRLPVKKGHEAGGLTLLTLLYICKRLGVKCVSAYAFSIENFNRPKEEVDT 60
Query: 78 LVKL----IKSFLKKGF-YSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
L+ L + F K+ Y K+R++G++ L ++ +K+ E+ T+ L
Sbjct: 61 LMNLFTVKLDEFAKRAKDYKDPLYGSKIRIVGDQSLLSPEMRKKIKKVEEITQDGDDFTL 120
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
FI F Y+SR+++ I++ +D ++ Y+ +L+IRT G +
Sbjct: 121 FICFPYTSRNDMLHTIRDSVEDHLENKSPRINIRKFTNKMYMGFHS-NKCELLIRTSGHR 179
Query: 193 RLSDFLLWQVAYSEFV-FIPEYWPDFS---------RELFFHALNQYNLRD 233
RLSD++LWQV + + F WP+FS + FF + +YN ++
Sbjct: 180 RLSDYMLWQVHENATIEFSDTLWPNFSFFAMYLMILKWSFFSTIQKYNEKN 230
>gi|126700378|ref|YP_001089275.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile 630]
gi|254976356|ref|ZP_05272828.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile
QCD-66c26]
gi|255093741|ref|ZP_05323219.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile CIP
107932]
gi|255101932|ref|ZP_05330909.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile
QCD-63q42]
gi|255307801|ref|ZP_05351972.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile ATCC
43255]
gi|255315493|ref|ZP_05357076.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile
QCD-76w55]
gi|255518156|ref|ZP_05385832.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile
QCD-97b34]
gi|255651272|ref|ZP_05398174.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile
QCD-37x79]
gi|255656746|ref|ZP_05402155.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile
QCD-23m63]
gi|260684336|ref|YP_003215621.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile CD196]
gi|260687995|ref|YP_003219129.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile
R20291]
gi|296452425|ref|ZP_06894126.1| possible Di-trans,poly-cis-decaprenylcistransferase [Clostridium
difficile NAP08]
gi|296877774|ref|ZP_06901800.1| possible Di-trans,poly-cis-decaprenylcistransferase [Clostridium
difficile NAP07]
gi|306521111|ref|ZP_07407458.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile
QCD-32g58]
gi|115251815|emb|CAJ69650.1| putative undecaprenyl pyrophosphate synthetase [Clostridium
difficile]
gi|260210499|emb|CBA64992.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile CD196]
gi|260214012|emb|CBE06141.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile
R20291]
gi|296258755|gb|EFH05649.1| possible Di-trans,poly-cis-decaprenylcistransferase [Clostridium
difficile NAP08]
gi|296431225|gb|EFH17046.1| possible Di-trans,poly-cis-decaprenylcistransferase [Clostridium
difficile NAP07]
Length = 214
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 104/233 (44%), Gaps = 27/233 (11%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+GII DGN RWA+ G+ + G+ GI+ E ++G + +T + F+ +N RR
Sbjct: 4 PKHVGIIPDGNRRWASQNGMTKDKGYESGIDPGLESYRLCRDLGCEEVTFYGFTTDNTRR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS--LDDDILCV---LKEAEDQTR 125
P + K L + V+GN S +++L +K E Q +
Sbjct: 64 PSVQTKAFTKACIDAAN----ILIDEGAALLVVGNTKSPMFPEELLPYTNRIKAKEGQIK 119
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N +N ++ ++ + KN QD Y+ + DV DLI
Sbjct: 120 ANLLVNYGWYWDLNNISGVENVNKNNIQD------------------YIQSFDVSRLDLI 161
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
IR GG +RLS FL Q Y++F I YWPDF + A + Y+ +D GG
Sbjct: 162 IRWGGRRRLSGFLPVQSIYADFYVIDNYWPDFKSDDIKDAFSWYDTQDVTLGG 214
>gi|302412783|ref|XP_003004224.1| dehydrodolichyl diphosphate synthase [Verticillium albo-atrum
VaMs.102]
gi|261356800|gb|EEY19228.1| dehydrodolichyl diphosphate synthase [Verticillium albo-atrum
VaMs.102]
Length = 366
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 97/190 (51%), Gaps = 9/190 (4%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ MDGN R+A + + GH G E ++ + G+K +T+
Sbjct: 29 LIGALKQGPVPQHVAFEMDGNRRYARGKRMETIEGHHHGFEALARVLEICYKSGVKVVTV 88
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N+ RP E+ L++L K L++ + L K VRV+G R L +D+L V+
Sbjct: 89 YAFSIENFNRPQYEVDGLMELAKVKLEQLTHHGDLLDKYGAAVRVLGQRDLLREDVLEVV 148
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIES------GSVCSHDVDSSLIA 171
A + T+ N L I Y+SR+E++ AI++ +D + + + + +++
Sbjct: 149 DRAVEMTKNNKKNALNICLPYTSREEMATAIRSTVEDYMTPPEPKFTAFPASRITQKILS 208
Query: 172 KYLDTSDVPD 181
K LD D D
Sbjct: 209 KQLDEKDQKD 218
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 165 VDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFF 223
+ + + ++ T+ P D+ +RT G +RLSDF+LWQ ++ F+ WP+F + +
Sbjct: 276 ITAETLNNHMYTAGDPPLDIFVRTSGVERLSDFMLWQAHQDTQIFFLKCLWPEFDLQHWL 335
Query: 224 HALNQYNLRDRRF 236
L ++ R ++
Sbjct: 336 PVLLEWQWRQKQM 348
>gi|322699257|gb|EFY91020.1| undecaprenyl diphosphate synthase family protein [Metarhizium
acridum CQMa 102]
Length = 358
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 86/157 (54%), Gaps = 10/157 (6%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ MDGN R+A + + GH +G E A A G+K +T+
Sbjct: 29 LIGALRQGPVPQHVAFEMDGNRRYARSHRMETVEGHHRGFE-------ALARCGVKVITV 81
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKK-GFYS--LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFS+ N+ RP E+ L++L K L++ Y L + VRV+G R + +D+L V+
Sbjct: 82 YAFSVENYNRPKHEVEGLMQLAKVKLEQLTTYGDILDRYGACVRVLGQREMVREDVLKVV 141
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD 154
+A +T+ N L I F Y+SR EI+ AI+N QD
Sbjct: 142 DKAVARTKHNNKTVLNICFPYTSRAEITTAIRNTVQD 178
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 165 VDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFF 223
+ + + ++ T+ P +L +RT G +RLSDF+LWQ ++ VFI WPDF + F
Sbjct: 268 ITTDTLNDHMYTAADPPLELFVRTSGVERLSDFMLWQCHQDTQIVFIDCLWPDFDLQHFI 327
Query: 224 HALNQYNLRDRR 235
+ ++ R ++
Sbjct: 328 WVMLEWQWRQKQ 339
>gi|167966591|ref|ZP_02548868.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis H37Ra]
Length = 163
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 80/146 (54%), Gaps = 4/146 (2%)
Query: 96 NNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIF-QD 154
N+ VR +G+ + ++ L+ A + T ++ +A Y R EI A++ + ++
Sbjct: 17 NHWSVRTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKE 76
Query: 155 IESGSVCSHDVDSSL---IAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIP 211
+ +G+ VD+ I++ L TS PDPDL+IRT GE+RLS FLLWQ AYSE F
Sbjct: 77 LANGATAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTE 136
Query: 212 EYWPDFSRELFFHALNQYNLRDRRFG 237
+WP F F AL Y+ R R +G
Sbjct: 137 AHWPAFRHVDFLRALRDYSARHRSYG 162
>gi|320591879|gb|EFX04318.1| dehydrodolichyl diphosphate synthase [Grosmannia clavigera kw1407]
Length = 354
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 84/160 (52%), Gaps = 3/160 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P HI MDGN R+A + GH G E +++ + G+K +T+
Sbjct: 30 LIGALSQGPIPQHISFEMDGNRRYAKMHKIEAIEGHHLGFEALAKVLEICYKCGVKVVTV 89
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N+ RP E+ L++L K L++ L + + VRV G R + D+L V+
Sbjct: 90 YAFSIENYHRPQYEVDGLMELAKVKLQQLMQHGAVLDRYGVSVRVQGQRDLIRADVLEVV 149
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIES 157
+ T+ N L I F Y+SR+EIS++I+N + S
Sbjct: 150 HRIVETTKHNARATLNICFPYTSREEISQSIRNTVSEYSS 189
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 165 VDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFF 223
+ + I ++ + P D+ +RT G +RLSDF+LWQ +E F+ +WP+F F
Sbjct: 269 ITAETIDSHMYITGDPPLDIFVRTSGVERLSDFMLWQCHQNTEIFFLKCFWPEFDLYHFL 328
Query: 224 HALNQYNLRDRR 235
L ++ R ++
Sbjct: 329 PVLVEWQRRQKQ 340
>gi|296808123|ref|XP_002844400.1| dehydrodolichyl diphosphate synthase [Arthroderma otae CBS 113480]
gi|238843883|gb|EEQ33545.1| dehydrodolichyl diphosphate synthase [Arthroderma otae CBS 113480]
Length = 419
Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ +MDGN R+A +G+ R GH G E +I+ GIK +TI
Sbjct: 31 LIGALRQGPIPQHVAFVMDGNRRFARNQGIERVEGHNLGFEALAKILEVCYSSGIKVVTI 90
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+++ K L++ L++ VRV+G R + D+L +
Sbjct: 91 YAFSIENFKRSKYEVDALMEMAKLKLQQLSEHGELLERYGASVRVLGRRDQIRPDVLEAV 150
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD 154
+ T N L I F Y+SRDEI+ A++N D
Sbjct: 151 DRTVETTSGNGDAILNICFPYTSRDEITSAVRNTVVD 187
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 165 VDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFF 223
+ + ++ ++ T+ P D++IRT G +RLSDF+LWQ ++ VF+ WP FS F
Sbjct: 308 ITTQTLSDHMLTAGCPPLDILIRTSGVERLSDFMLWQCHQETQIVFLDTLWPAFSLWDFL 367
Query: 224 HALNQYNLRDRRFG 237
+ + R R+ G
Sbjct: 368 PVVWDWQRRQRKTG 381
>gi|302923503|ref|XP_003053690.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256734631|gb|EEU47977.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 363
Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 86/157 (54%), Gaps = 3/157 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ MDGN R+A + + GH G E I+ + G+K +T+
Sbjct: 30 LIGALKQGPIPQHVSFEMDGNRRYARSHRMETVEGHHHGFEALARIMEICYKCGVKVVTV 89
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N+ RP E+ L++L K L++ + L + +VRV+G R + D+L V+
Sbjct: 90 YAFSIENYNRPKYEVEGLMQLAKVKLEQLTNYGHILDRYGARVRVLGQREMIRADVLEVV 149
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD 154
+A +T+ N L I F Y+SR E++ A+++ Q+
Sbjct: 150 DKAVARTKHNNKAVLNICFPYTSRAEMTTAVRSTVQE 186
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 157 SGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWP 215
SG + + + K++ T+ P D+ +RT G +RLSDF+LWQ ++ FI WP
Sbjct: 269 SGLPNPETITAETLDKHMYTASDPPLDIFVRTSGVERLSDFMLWQCHQDTQIFFIDTLWP 328
Query: 216 DFSRELFFHALNQYNLRDRR 235
DF F L ++ R ++
Sbjct: 329 DFDLHDFIWILLEWQWRQKQ 348
>gi|302825792|ref|XP_002994478.1| hypothetical protein SELMODRAFT_432400 [Selaginella moellendorffii]
gi|300137561|gb|EFJ04456.1| hypothetical protein SELMODRAFT_432400 [Selaginella moellendorffii]
Length = 167
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 52/78 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGN RWA RGL GH G+ EIVAA++ +GIK LT+FAFS NWRR
Sbjct: 83 PEHVAIIMDGNSRWAKLRGLATDRGHEAGVHALREIVAASSRLGIKTLTVFAFSTENWRR 142
Query: 71 PVSEISELVKLIKSFLKK 88
P EI L++L + + +
Sbjct: 143 PTIEIQFLMQLFERVISE 160
>gi|310798483|gb|EFQ33376.1| di-trans,poly-cis-decaprenylcistransferase [Glomerella graminicola
M1.001]
Length = 360
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 83/157 (52%), Gaps = 3/157 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ MDGN R+A + + GH G E ++ + G+K +T+
Sbjct: 30 LIGALKQGPVPQHVAFEMDGNRRYARGKKMETIEGHHHGFEALARVLEICYKCGVKVVTV 89
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N+ RP E+ L++L K L K L + VRV+G R + D+L V+
Sbjct: 90 YAFSIENFNRPQYEVDGLMQLAKVKLEQLTKHGDILDRYGAAVRVLGQRDLIRKDVLEVV 149
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD 154
A D T+ N L I F Y++R+E++ AI++ Q+
Sbjct: 150 DRAVDMTKYNKRNVLNICFPYTAREEMTTAIRSTVQE 186
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 165 VDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFV-FIPEYWPDFSRELFF 223
+ + + ++ T+ P D+ +RT G +RLSDF+LWQ + F+ WPDF + F
Sbjct: 270 ITAETLNNHMYTAGNPPLDIFVRTSGVERLSDFMLWQCHQDTHIFFLKCLWPDFDLQHFL 329
Query: 224 HALNQYNLRDRR 235
L ++ R ++
Sbjct: 330 PVLLEWQWRQKK 341
>gi|303311335|ref|XP_003065679.1| undecaprenyl diphosphate synthase family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240105341|gb|EER23534.1| undecaprenyl diphosphate synthase family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|320039524|gb|EFW21458.1| prenyltransferase [Coccidioides posadasii str. Silveira]
Length = 397
Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 83/157 (52%), Gaps = 3/157 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ +MDGN R+A + R GH G E +I+ + G+K +TI
Sbjct: 31 LIGALKQGPIPQHVAFVMDGNRRFARNHAIERVEGHNLGFEALAKILEVCYKAGVKVVTI 90
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+++ K S L + L + VRV+G R + D+L +
Sbjct: 91 YAFSIENFKRSKFEVDALMEMAKVKLSQLSQHGDLLDRYGASVRVLGRRELVKADVLEAI 150
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD 154
A + T N L I F Y+SRDEI+ AI+N D
Sbjct: 151 DRAVELTSRNGDAILNICFPYTSRDEITSAIRNTVID 187
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 165 VDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFF 223
+ + + ++ T+D P DL+IRT G +RLSDF+LWQ ++ +F+ WP F F
Sbjct: 284 ISTQTLDDHMLTADSPPLDLLIRTSGVERLSDFMLWQCHEDTDIIFLDTLWPSFGLWDFL 343
Query: 224 HALNQYNLRDRRFG 237
L ++ R R+ G
Sbjct: 344 PVLWEWQWRVRKQG 357
>gi|299473464|emb|CBN77861.1| undecaprenyl diphosphate synthase [Ectocarpus siliculosus]
Length = 373
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 67/112 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +MDGNGRWAA R LPR GH +G E V A +G++ +T++AFS NWRR
Sbjct: 72 PRHVAFVMDGNGRWAANRNLPRRIGHAEGARRAGEAVEACRRLGVEFVTLYAFSTENWRR 131
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
P E+S ++ L++ L + SL++N I++ IG L + +L E ++
Sbjct: 132 PTGEVSFIMDLMEETLLEQRDSLRRNGIRLTAIGELDRLPARLRSLLLEIQE 183
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS--DVPDPDLIIR 187
+ L +A +Y R E+ A + + + +G + D+D +A+ L T+ +PDPDL++R
Sbjct: 255 MTLCLAISYGGRSELVAAARELAAEAAAGRLDPADIDEPALARRLSTARLGIPDPDLVVR 314
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
T GE RLS+ L+WQ AYSE + + WPDF R A Y R RRFG
Sbjct: 315 TSGESRLSNLLVWQSAYSELCVVGKAWPDFRRPDLVEAFRDYGRRRRRFG 364
>gi|258567684|ref|XP_002584586.1| saccharopine dehydrogenase [Uncinocarpus reesii 1704]
gi|237906032|gb|EEP80433.1| saccharopine dehydrogenase [Uncinocarpus reesii 1704]
Length = 769
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 83/157 (52%), Gaps = 3/157 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ +MDGN R+A + R GH G E +I+ + G+K +TI
Sbjct: 31 LIGAIKQGPIPQHVAFVMDGNRRFARNHAIERVEGHNLGFEALAKILEVCYKAGVKVVTI 90
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+++ K S L + L + VRV+G R + D+L +
Sbjct: 91 YAFSIENFKRSKFEVDALMEMAKVKLSQLSQHGDLLDRYGASVRVLGRRELVKADVLEAI 150
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD 154
A + T N L I F Y+SRDEI+ AI+N D
Sbjct: 151 DRAVEVTSRNGDAILNICFPYTSRDEITSAIRNTVID 187
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 27/39 (69%)
Query: 165 VDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVA 203
+ + + +++ T+ P D+++RT G +RLSDF+LWQ +
Sbjct: 287 ISTQTLEEHMLTAGSPPLDVLVRTPGVERLSDFMLWQCS 325
>gi|325067237|ref|ZP_08125910.1| undecaprenyl pyrophosphate synthase [Actinomyces oris K20]
Length = 131
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 69/123 (56%), Gaps = 9/123 (7%)
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYL 174
EAED+ + + IA Y R EI+ A++ + ++ + +V +SL I ++L
Sbjct: 13 EAEDRR-----MQVNIAVGYGGRQEIADAVRELLRERAAAGASLEEVAASLSEEDITEHL 67
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
T PDPDL+IRT GE+RLS FLLWQ +SE+ F WP F R F AL + R+R
Sbjct: 68 YTKGQPDPDLVIRTSGEQRLSGFLLWQSVHSEYYFCEVNWPAFRRVDFLRALRDFASRER 127
Query: 235 RFG 237
R G
Sbjct: 128 RLG 130
>gi|254392806|ref|ZP_05007977.1| undecaprenyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
gi|197706464|gb|EDY52276.1| undecaprenyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
Length = 202
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 95/184 (51%), Gaps = 4/184 (2%)
Query: 54 GIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDI 113
GI +T++A S +N RR + + ++ L G + + +I R+IG L
Sbjct: 22 GIAVVTVWALSRDNLRRDAAAVGRILDATAVGLA-GIAASGRWHI--RLIGETDLLPAAP 78
Query: 114 LCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKY 173
L+ D+T + L +A Y R +I+ A++ + + +G + V S + +Y
Sbjct: 79 ARRLRSVADRTATGSPGTLNVAVAYDGRADIAGAVRGLLRSGVTGGTAAA-VRESDVERY 137
Query: 174 LDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
L T+ +PD DL+IRT GE+RLS FL WQ AY+E F WP FS + F AL Y R
Sbjct: 138 LSTAGLPDVDLVIRTSGERRLSGFLPWQTAYAELHFTAALWPAFSFDDFTVALRSYRARR 197
Query: 234 RRFG 237
RRFG
Sbjct: 198 RRFG 201
>gi|119500270|ref|XP_001266892.1| prenyltransferase, putative [Neosartorya fischeri NRRL 181]
gi|119415057|gb|EAW24995.1| prenyltransferase, putative [Neosartorya fischeri NRRL 181]
Length = 403
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 82/157 (52%), Gaps = 3/157 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P HI +MDGN R+A + G+ GH G E I+ + G+K +TI
Sbjct: 31 LIGALKQGPVPQHIAFVMDGNRRFARSHGIETVEGHNLGFEALARILEVCYKCGVKVVTI 90
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+ + K L++ L + KVRV+G L D+L +
Sbjct: 91 YAFSIENFKRSKFEVDALMDMAKVKLQQMAQHGDLLDRYGAKVRVLGRLDLLKPDVLEAV 150
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD 154
A + T N L I F Y+SRDEI+ AI++ D
Sbjct: 151 NRAVEMTSRNGERVLNICFPYTSRDEITGAIRDTVAD 187
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 156 ESGSVCSHDVDS---SLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIP 211
ESG + D+ + ++ T P DL++RT G +RLSDF+LWQ +E VF+
Sbjct: 288 ESGKIVFPSPDTITRQTLTDHMLTKGNPPLDLLVRTSGVERLSDFMLWQCDEDTEIVFLD 347
Query: 212 EYWPDFSRELFFHALNQYNLR 232
WP+F F L + R
Sbjct: 348 VLWPEFDLWHFLPVLLGWQRR 368
>gi|159125384|gb|EDP50501.1| prenyltransferase, putative [Aspergillus fumigatus A1163]
Length = 403
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 82/157 (52%), Gaps = 3/157 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P HI +MDGN R+A + G+ GH G E I+ + G+K +TI
Sbjct: 31 LIGALKQGPVPQHIAFVMDGNRRFARSHGIETVEGHNLGFEALARILEVCYKCGVKVVTI 90
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+ + K L++ L + KVRV+G L D+L +
Sbjct: 91 YAFSIENFKRSKFEVDALMDMAKVKLQQMAQHGDLLDRYGAKVRVLGRLDLLKPDVLDAV 150
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD 154
A + T N L I F Y+SRDEI+ AI++ D
Sbjct: 151 NRAVEMTSRNGERVLNICFPYTSRDEITGAIRDTVAD 187
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 156 ESGSVCSHDVDS---SLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIP 211
ESG + D+ + ++ T P DL++RT G +RLSDF+LWQ +E VF+
Sbjct: 288 ESGKIVFPSPDTITRQTLTDHMLTKGNPPLDLLVRTSGVERLSDFMLWQCDEDTEIVFLD 347
Query: 212 EYWPDFSRELFFHALNQYNLR 232
WP+F F L + R
Sbjct: 348 VLWPEFDLWHFLPVLLSWQRR 368
>gi|70993694|ref|XP_751694.1| prenyltransferase [Aspergillus fumigatus Af293]
gi|66849328|gb|EAL89656.1| prenyltransferase, putative [Aspergillus fumigatus Af293]
Length = 403
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 82/157 (52%), Gaps = 3/157 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P HI +MDGN R+A + G+ GH G E I+ + G+K +TI
Sbjct: 31 LIGALKQGPVPQHIAFVMDGNRRFARSHGIETVEGHNLGFEALARILEVCYKCGVKVVTI 90
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+ + K L++ L + KVRV+G L D+L +
Sbjct: 91 YAFSIENFKRSKFEVDALMDMAKVKLQQMAQHGDLLDRYGAKVRVLGRLDLLKPDVLDAV 150
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD 154
A + T N L I F Y+SRDEI+ AI++ D
Sbjct: 151 NRAVEMTSRNGERVLNICFPYTSRDEITGAIRDTVAD 187
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 156 ESGSVCSHDVDS---SLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIP 211
ESG + D+ + ++ T P DL++RT G +RLSDF+LWQ +E VF+
Sbjct: 288 ESGKIVFPSPDTITRQTLTDHMLTKGNPPLDLLVRTSGVERLSDFMLWQCDEDTEIVFLD 347
Query: 212 EYWPDFSRELFFHALNQYNLR 232
WP+F F L + R
Sbjct: 348 VLWPEFDLWHFLPVLLSWQRR 368
>gi|302498967|ref|XP_003011480.1| hypothetical protein ARB_02330 [Arthroderma benhamiae CBS 112371]
gi|291175031|gb|EFE30840.1| hypothetical protein ARB_02330 [Arthroderma benhamiae CBS 112371]
Length = 520
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ +MDGN R+A +G+ R GH G E +I+ GIK +TI
Sbjct: 31 LIGALRQGPIPQHVAFVMDGNRRFARNQGIERVEGHNLGFEALAKILEVCYSSGIKVVTI 90
Query: 61 FAFSINNWRRPVSEISELVKLIK-SFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+++ K L+ + L++ VRV+G R + D+L +
Sbjct: 91 YAFSIENFKRSKYEVDALMEMAKLKLLQLSEHGELLERYGASVRVLGRRDQIRPDVLEAV 150
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD 154
+ T N L I F Y+SRDEI+ A++N +
Sbjct: 151 DRTVELTSGNGDAILNICFPYTSRDEITSAVRNTVME 187
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 165 VDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFF 223
+ + ++ ++ T+ P D++IRT G +RLSDF+LWQ ++ VF+ WP FS F
Sbjct: 322 ITTQTLSDHMLTAGCPPLDILIRTSGVERLSDFMLWQCHQDTQIVFLDTLWPAFSLWEFL 381
Query: 224 HALNQYNLRDRRFGG 238
+ + R R+ G
Sbjct: 382 PVIWDWQRRIRKTGS 396
>gi|121707995|ref|XP_001271998.1| prenyltransferase, putative [Aspergillus clavatus NRRL 1]
gi|119400146|gb|EAW10572.1| prenyltransferase, putative [Aspergillus clavatus NRRL 1]
Length = 408
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 82/157 (52%), Gaps = 3/157 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P HI +MDGN R+A + + GH G E I+ + G+K +TI
Sbjct: 31 LIGALRQGPVPQHIAFVMDGNRRFARSHRIETVEGHNLGFEALARILEVCYKCGVKVVTI 90
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+++ K L++ L + +VRV+G L D+L +
Sbjct: 91 YAFSIENFKRSKFEVDALMEMAKVKLQQMAQHGDLLDRYGARVRVLGRLDLLKPDVLAAV 150
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD 154
A D T N L I F Y+SRDEI+ AI++ D
Sbjct: 151 NRAVDMTSRNGDRVLNICFPYTSRDEITGAIRDTVAD 187
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 160 VCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQV-AYSEFVFIPEYWPDF 217
V + ++ ++ T P DL++RT G +RLSDF+LWQ +E VF+ WP+F
Sbjct: 295 VSPETITRQTLSDHMLTKGNPPLDLLVRTSGVERLSDFMLWQCHEETEIVFLDVLWPEF 353
>gi|302659128|ref|XP_003021259.1| hypothetical protein TRV_04691 [Trichophyton verrucosum HKI 0517]
gi|291185147|gb|EFE40641.1| hypothetical protein TRV_04691 [Trichophyton verrucosum HKI 0517]
Length = 532
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ +MDGN R+A +G+ R GH G E +I+ GIK +TI
Sbjct: 31 LIGALRQGPIPQHVAFVMDGNRRFARNQGIERVEGHNLGFEALAKILEVCYSSGIKVVTI 90
Query: 61 FAFSINNWRRPVSEISELVKLIK-SFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+++ K L+ + L++ VRV+G R + D+L +
Sbjct: 91 YAFSIENFKRSKYEVDALMEMAKLKLLQLSEHGELLERYGASVRVLGRRDQIRPDVLEAV 150
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD 154
+ T N L I F Y+SRDEI+ A++N +
Sbjct: 151 DRTVELTSGNGDAILNICFPYTSRDEITSAVRNTVME 187
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 165 VDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFF 223
+ + ++ ++ T+ P D++IRT G +RLSDF+LWQ ++ VF+ WP FS F
Sbjct: 325 ITTQTLSDHMLTAGCPPLDILIRTSGVERLSDFMLWQCHQDTQIVFLDTLWPAFSLWEFL 384
Query: 224 HALNQYNLRDRRFGG 238
+ + R R+ G
Sbjct: 385 PVIWDWQRRIRKTGS 399
>gi|326476258|gb|EGE00268.1| prenyltransferase [Trichophyton tonsurans CBS 112818]
Length = 427
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ +MDGN R+A +G+ R GH G E +I+ GIK +TI
Sbjct: 31 LIGALRQGPIPQHVAFVMDGNRRFARNQGIERVEGHNLGFEALAKILEVCYSSGIKVVTI 90
Query: 61 FAFSINNWRRPVSEISELVKLIK-SFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+++ K L+ + L++ VRV+G R + D+L +
Sbjct: 91 YAFSIENFKRSKYEVDALMEMAKLKLLQLSEHGELLERYGASVRVLGRRDQIRPDVLEAV 150
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD 154
+ T N L I F Y+SRDEI+ A++N +
Sbjct: 151 DRTVELTSGNGDAILNICFPYTSRDEITSAVRNTVME 187
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 165 VDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFF 223
+ + ++ ++ T+ P D++IRT G +RLSDF+LWQ ++ VF+ WP FS F
Sbjct: 316 ITTQTLSDHMLTAGCPPLDILIRTSGVERLSDFMLWQCHQDTQIVFLDTLWPAFSLWEFL 375
Query: 224 HALNQYNLRDRRFG 237
+ + R R+ G
Sbjct: 376 PVIWDWQRRIRKTG 389
>gi|327295398|ref|XP_003232394.1| prenyltransferase [Trichophyton rubrum CBS 118892]
gi|326465566|gb|EGD91019.1| prenyltransferase [Trichophyton rubrum CBS 118892]
Length = 429
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ +MDGN R+A +G+ R GH G E +I+ GIK +TI
Sbjct: 31 LIGALRQGPIPQHVAFVMDGNRRFARNQGIERVEGHNLGFEALAKILEVCYSSGIKVVTI 90
Query: 61 FAFSINNWRRPVSEISELVKLIK-SFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+++ K L+ + L++ VRV+G R + D+L +
Sbjct: 91 YAFSIENFKRSKYEVDALMEMAKLKLLQLSEHGELLERYGASVRVLGRRDQIRPDVLEAV 150
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD 154
+ T N L I F Y+SRDEI+ A++N +
Sbjct: 151 DRTVELTSGNGDAILNICFPYTSRDEITSAVRNTVME 187
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 165 VDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFF 223
+ + ++ ++ T+ P D++IRT G +RLSDF+LWQ ++ VF+ WP FS F
Sbjct: 318 ITTQTLSDHMLTAGCPPLDILIRTSGVERLSDFMLWQCHQDTQIVFLDTLWPAFSLWEFL 377
Query: 224 HALNQYNLRDRRFG 237
+ + R R+ G
Sbjct: 378 PVIWDWQRRIRKTG 391
>gi|56206239|emb|CAI21491.1| dehydrodolichyl diphosphate synthase [Homo sapiens]
Length = 161
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 71/120 (59%)
Query: 112 DILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIA 171
D+ ++ +A T+ L + F Y+SR EIS A++ + +E G + D+ SL+
Sbjct: 6 DLQELIAQAVQATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDISESLLD 65
Query: 172 KYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
K L T+ P PD++IRT GE RLSDFLLWQ ++S VF P WP+++ F A+ Q+ +
Sbjct: 66 KCLYTNRSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQM 125
>gi|323334501|gb|EGA75875.1| Rer2p [Saccharomyces cerevisiae AWRI796]
Length = 236
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 97/189 (51%), Gaps = 11/189 (5%)
Query: 35 GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKL----IKSFLKKGF 90
GH G + I+ E G+ T+FAFSI N++R E+ L+ L I+ ++G
Sbjct: 6 GHEAGFVSMSRILELCYEAGVDTATVFAFSIENFKRSSREVESLMTLARERIRQITERGE 65
Query: 91 YSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKN 150
+ K +++++IG+ LD +L ++ A + T+ N L I F Y+ R+EI AIK
Sbjct: 66 LACK-YGVRIKIIGDLSLLDKSLLEDVRVAVETTKNNKRATLNICFPYTGREEILHAIKE 124
Query: 151 IFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYS--EFV 208
+ G+ + S + +L T+ VP DL+IRT G RLSDFL+WQ +
Sbjct: 125 TIVQHKKGAA----IGESTLESHLYTAGVPPLDLLIRTSGVSRLSDFLIWQASSKGVRIE 180
Query: 209 FIPEYWPDF 217
+ WP+F
Sbjct: 181 LLDCLWPEF 189
>gi|115391235|ref|XP_001213122.1| hypothetical protein ATEG_03944 [Aspergillus terreus NIH2624]
gi|114194046|gb|EAU35746.1| hypothetical protein ATEG_03944 [Aspergillus terreus NIH2624]
Length = 397
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 81/157 (51%), Gaps = 3/157 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+V ++ P H+ +MDGN R+A G+ GH G E I+ G+K +TI
Sbjct: 31 LVGAIRQGPVPQHVAFVMDGNRRFARTHGIETVEGHNLGFEALARILEVCYRSGVKVVTI 90
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+++ + S + + L + KVRV+G L D+L +
Sbjct: 91 YAFSIENFKRSKFEVDALMEMARVKLSQMAQHGEILDRYGAKVRVLGRLDLLRPDVLAAV 150
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD 154
A D T N L I F Y+SRDEI+ AI++ +
Sbjct: 151 NRAMDMTSNNGDCVLNICFPYTSRDEITGAIRDTVTE 187
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 170 IAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDF 217
+ +L T D P DL++RT G +RLSDF+LWQ +E VF+ WP+F
Sbjct: 304 LTSHLLTKDNPPLDLLVRTSGVERLSDFMLWQCHEDTEIVFLDVLWPEF 352
>gi|259484938|tpe|CBF81586.1| TPA: prenyltransferase, putative (AFU_orthologue; AFUA_4G11350)
[Aspergillus nidulans FGSC A4]
Length = 403
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 81/152 (53%), Gaps = 3/152 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+V ++ P HI IMDGN R+A + G+ GH G E I+ G++ +TI
Sbjct: 31 LVGAIKQGPVPQHIAFIMDGNRRFARSHGIETVEGHNLGFEALARILEVCYRSGVQVVTI 90
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+++ + S + + L + KVR++G L D+L +
Sbjct: 91 YAFSIENFKRSKFEVDALMEMARVKLSQMAQHGEILDRYGAKVRILGRLDLLRPDVLAAV 150
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIK 149
A D T+ N L I F Y+SRDEI+ AI+
Sbjct: 151 NRAVDMTKNNGDRVLNICFPYTSRDEITGAIR 182
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 170 IAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQV-AYSEFVFIPEYWPDF 217
+A ++ T D P DL+IRT G +RLSDF+LWQ +E F+ WP+F
Sbjct: 300 LADHMLTRDNPPLDLLIRTSGVERLSDFMLWQCHENTEIAFLDILWPEF 348
>gi|323356279|gb|EGA88083.1| Rer2p [Saccharomyces cerevisiae VL3]
Length = 236
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 97/189 (51%), Gaps = 11/189 (5%)
Query: 35 GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKL----IKSFLKKGF 90
GH G + I+ E G+ T+FAFSI N++R E+ L+ L I+ ++G
Sbjct: 6 GHEAGFVSMSRILELCYEAGVDTATVFAFSIENFKRSSREVESLMTLARERIRQITERGE 65
Query: 91 YSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKN 150
+ K +++++IG+ LD +L ++ A + T+ N L I F Y+ R+EI A+K
Sbjct: 66 LACK-YGVRIKIIGDLSLLDKSLLEDVRVAVETTKNNKRATLNICFPYTGREEILHAMKE 124
Query: 151 IFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYS--EFV 208
+ G+ + S + +L T+ VP DL+IRT G RLSDFL+WQ +
Sbjct: 125 TIVQHKKGAA----IGESTLESHLYTAGVPPLDLLIRTSGVSRLSDFLIWQASSKGVRIE 180
Query: 209 FIPEYWPDF 217
+ WP+F
Sbjct: 181 LLDCLWPEF 189
>gi|317038645|ref|XP_001401889.2| prenyltransferase [Aspergillus niger CBS 513.88]
Length = 398
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 81/153 (52%), Gaps = 3/153 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+V ++ P HI +MDGN R+A G+ GH G E I+ + G+K +TI
Sbjct: 31 LVGAIRQGPVPQHIAFVMDGNRRFARTHGIETVEGHNMGFEALARILEVCYKSGVKVVTI 90
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+++ + S + + L + KVR++G L D+L +
Sbjct: 91 YAFSIENFKRSKFEVDALMEMARVKLSQMAQHGEILDRYGAKVRILGRLDLLRPDVLAAV 150
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKN 150
A + T N L I F Y+SRDEI+ A+++
Sbjct: 151 NRAVEMTSNNGDCVLNICFPYTSRDEITTAVRD 183
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 170 IAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFFHALNQ 228
++++L T D P DL++RT G +RLSDF+LWQ +E VF+ WPDF F + +
Sbjct: 303 LSEHLFTHDNPPLDLLVRTSGVERLSDFMLWQCHEDTEIVFLDVLWPDFDLWQFLPVMLR 362
Query: 229 YNLR 232
+ R
Sbjct: 363 WQRR 366
>gi|2231183|gb|AAB61966.1| ORF1 [Haemophilus influenzae]
Length = 106
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 63/104 (60%)
Query: 135 AFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRL 194
A NY +I +A K I + ++ + D+++S +L T + P DL+IRT GE+R+
Sbjct: 1 AANYGGCWDIIQAAKQIAEKVKKEEMSVSDINNSTFQHHLATQNAPPVDLLIRTSGEQRI 60
Query: 195 SDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
S+FLLWQ+AY+E F WPDF++ F A+ Y R RRFGG
Sbjct: 61 SNFLLWQIAYAELYFSDVLWPDFNQLEFNRAIASYQQRHRRFGG 104
>gi|309807181|ref|ZP_07701155.1| di-trans,poly-cis-decaprenylcistransferase-like protein
[Lactobacillus iners LactinV 03V1-b]
gi|308166402|gb|EFO68607.1| di-trans,poly-cis-decaprenylcistransferase-like protein
[Lactobacillus iners LactinV 03V1-b]
Length = 107
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 54/84 (64%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
DH+ IIMDGNGRWA R LPR GHR G+ EI A E+G+K LT++AFS NW RP
Sbjct: 9 DHLAIIMDGNGRWAQERHLPRIIGHRSGMNKVKEIALVANELGVKVLTLYAFSTENWGRP 68
Query: 72 VSEISELVKLIKSFLKKGFYSLKK 95
E++ L+KL +FL S +K
Sbjct: 69 RDEVNYLMKLPINFLINLCQSCRK 92
>gi|307824399|ref|ZP_07654624.1| Di-trans-poly-cis-decaprenylcistransferase [Methylobacter
tundripaludum SV96]
gi|307734383|gb|EFO05235.1| Di-trans-poly-cis-decaprenylcistransferase [Methylobacter
tundripaludum SV96]
Length = 204
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 105/234 (44%), Gaps = 30/234 (12%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M ++ P H+G I DGN RWA GLP+ G+ GI + E GIK +I+ F+
Sbjct: 1 MAKNNIPRHVGFIPDGNRRWAIDHGLPKETGYAHGINPGFLLYELCKEYGIKEASIYCFT 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
+N +RP + + +F + + + V+G+ S + + +
Sbjct: 61 QDNTKRPSIQKQAFSEASVAFA----LEIARRGAALLVVGDETSTQFPKELI----KFRQ 112
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
R G+ + + NY ++ +++G + S DV S L DL
Sbjct: 113 RQGDGIKVNLLVNYGWEWDLV--------GLKNGGLRSEDV-SRL-------------DL 150
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
IIR GG +RLS FL Q Y++F EYWPDF + F AL Y +D+ GG
Sbjct: 151 IIRWGGGRRLSGFLPVQSVYADFYVRDEYWPDFDPQHFEQALAWYKKQDQTLGG 204
>gi|9757752|dbj|BAB08233.1| undecaprenyl pyrophosphate synthetase-like protein [Arabidopsis
thaliana]
Length = 251
Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 103/216 (47%), Gaps = 14/216 (6%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P +I IMDGN R+A L AGHR G I+ E+G+ +T+ AF ++N++
Sbjct: 15 PTNISFIMDGNRRFAKKHNLIGLDAGHRAGFISVKYILQYCKEIGVPYVTLHAFGMDNFK 74
Query: 70 RPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
R E+ ++ L+ ++ S N +++ G+ SL++ K+ + T
Sbjct: 75 RGPEEVKCVMDLMLEKVELAIDQAVSGNMNGVRIIFAGDLDSLNEHFRAATKKLMELTEE 134
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL-----IAKYLDTSDVPD 181
N L + + YS+ EI A++ C++ D L + + + TS VP
Sbjct: 135 NRDLIVVVCVAYSTSLEIVHAVRK-----SCVRKCTNGDDLVLLELSDVEECMYTSIVPV 189
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDF 217
PDL+IRTGG RLS+F+ WQ + S WP+
Sbjct: 190 PDLVIRTGGGDRLSNFMTWQTSRSLLHRTEALWPEL 225
>gi|321257983|ref|XP_003193770.1| prenyltransferase [Cryptococcus gattii WM276]
gi|317460240|gb|ADV21983.1| prenyltransferase, putative [Cryptococcus gattii WM276]
Length = 245
Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 106/218 (48%), Gaps = 24/218 (11%)
Query: 5 MMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++S P P H+ +MDGN R+A G +GH +G + + I+ ++I+AF
Sbjct: 23 LLSLGPIPQHVAFVMDGNRRYARELGQQVESGHTEGFNALRRTLEICLRLRIRAVSIYAF 82
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+I+N+ R E+ L+ L K L + L++ +K+R IG L D+L +++
Sbjct: 83 AIDNFSRSEKEVGALMNLAKQRLTELCQHGDLLEEYGVKIRFIGQLDLLPPDVLQAVRDM 142
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E T+ N N A + +S+AI VD SL +++ +
Sbjct: 143 EAMTQGNK--NDITAKDVFDSLGVSKAINT--------------VDKSL---FVNPEEPE 183
Query: 181 DPDLIIRTGGEKRLSDFLLWQVA-YSEFVFIPEYWPDF 217
D+++RT KRLSDF++WQ ++ F+ YWP+F
Sbjct: 184 KLDILVRTSDVKRLSDFMMWQACDDTQLHFVKTYWPEF 221
>gi|238486016|ref|XP_002374246.1| prenyltransferase, putative [Aspergillus flavus NRRL3357]
gi|220699125|gb|EED55464.1| prenyltransferase, putative [Aspergillus flavus NRRL3357]
Length = 403
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 81/157 (51%), Gaps = 3/157 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P HI +MDGN R+A G+ GH G E I+ G+K +TI
Sbjct: 31 LIGAIRQGPVPQHIAFVMDGNRRFARTHGIETVEGHNLGFEALARILEVCYRSGVKVVTI 90
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+++ + S + + L + KVRV+G L D+L +
Sbjct: 91 YAFSIENFKRSKFEVDALMEMARVKLSQMAQHGEILDRYGAKVRVLGRLDLLRPDVLKAV 150
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD 154
A + T N L I F Y+SRDEI+ AI++ D
Sbjct: 151 NRAMEMTSNNGDRVLNICFPYTSRDEITSAIRDTVAD 187
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 144 ISRAIKNIFQDIESGSVCSHD-VDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQV 202
+ +A + ++E+ + S + + ++ +L T D P DL+IRT G +RLSDF+LWQ
Sbjct: 275 LKKATQGASAELENPAYLSPETITRQTLSDHLHTKDNPPLDLLIRTSGVERLSDFMLWQC 334
Query: 203 AY-SEFVFIPEYWPDF 217
++ VF+ WP+F
Sbjct: 335 DEDTDIVFLDVLWPEF 350
>gi|169771429|ref|XP_001820184.1| prenyltransferase [Aspergillus oryzae RIB40]
gi|83768043|dbj|BAE58182.1| unnamed protein product [Aspergillus oryzae]
Length = 403
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 81/157 (51%), Gaps = 3/157 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P HI +MDGN R+A G+ GH G E I+ G+K +TI
Sbjct: 31 LIGAIRQGPVPQHIAFVMDGNRRFARTHGIETVEGHNLGFEALARILEVCYRSGVKVVTI 90
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+++ + S + + L + KVRV+G L D+L +
Sbjct: 91 YAFSIENFKRSKFEVDALMEMARVKLSQMAQHGEILDRYGAKVRVLGRLDLLRPDVLKAV 150
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD 154
A + T N L I F Y+SRDEI+ AI++ D
Sbjct: 151 NRAMEMTSNNGDRVLNICFPYTSRDEITSAIRDTVAD 187
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 170 IAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDF 217
++ +L T D P DL+IRT G +RLSDF+LWQ ++ VF+ WP+F
Sbjct: 302 LSDHLHTKDNPPLDLLIRTSGVERLSDFMLWQCDEDTDIVFLDVLWPEF 350
>gi|15239357|ref|NP_200858.1| undecaprenyl pyrophosphate synthetase family protein / UPP
synthetase family protein [Arabidopsis thaliana]
gi|75246018|sp|Q8LED0|DDPS7_ARATH RecName: Full=Dehydrodolichyl diphosphate synthase 7;
Short=Dedol-PP synthase 7
gi|21553621|gb|AAM62714.1| undecaprenyl diphosphate synthase [Arabidopsis thaliana]
gi|332009954|gb|AED97337.1| dehydrodolichyl diphosphate synthase 7 [Arabidopsis thaliana]
Length = 271
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 103/216 (47%), Gaps = 14/216 (6%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P +I IMDGN R+A L AGHR G I+ E+G+ +T+ AF ++N++
Sbjct: 35 PTNISFIMDGNRRFAKKHNLIGLDAGHRAGFISVKYILQYCKEIGVPYVTLHAFGMDNFK 94
Query: 70 RPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
R E+ ++ L+ ++ S N +++ G+ SL++ K+ + T
Sbjct: 95 RGPEEVKCVMDLMLEKVELAIDQAVSGNMNGVRIIFAGDLDSLNEHFRAATKKLMELTEE 154
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL-----IAKYLDTSDVPD 181
N L + + YS+ EI A++ C++ D L + + + TS VP
Sbjct: 155 NRDLIVVVCVAYSTSLEIVHAVRK-----SCVRKCTNGDDLVLLELSDVEECMYTSIVPV 209
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDF 217
PDL+IRTGG RLS+F+ WQ + S WP+
Sbjct: 210 PDLVIRTGGGDRLSNFMTWQTSRSLLHRTEALWPEL 245
>gi|241121705|ref|XP_002403312.1| undecaprenyl pyrophosphate synthetase, putative [Ixodes scapularis]
gi|215493421|gb|EEC03062.1| undecaprenyl pyrophosphate synthetase, putative [Ixodes scapularis]
Length = 396
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 101/224 (45%), Gaps = 37/224 (16%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P +G I DGN R+A GL GHR G + + A ++G+ +++ FS +N++R
Sbjct: 42 PGVLGFIPDGNRRFARKLGLRVEQGHRAGSDKLGSVRTWATKLGVSQTSVYVFSTHNFKR 101
Query: 71 PVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
P +E++ + +F ++ K+ ++R +G+ L D+ + +A+ T N
Sbjct: 102 PENELNGIFSETVTFCREIIDDPARQKRRGFRIRFVGDLEMLPRDLQRTVAKADIATSGN 161
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+G D+ LI +Y++ D P+ +++ R
Sbjct: 162 SG----------------------------------DITPQLIDEYMNIEDAPETEMLTR 187
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
T GE RLSDF+LWQ ++ F P+ P+ + A+ Y +
Sbjct: 188 TSGEARLSDFILWQSDFAMLYFEPKNMPEVGLFDYVKAIIHYQI 231
>gi|58266028|ref|XP_570170.1| prenyltransferase [Cryptococcus neoformans var. neoformans JEC21]
gi|57226403|gb|AAW42863.1| prenyltransferase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 245
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 107/211 (50%), Gaps = 23/211 (10%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +MDGN R+A G +GH +G + + I+ ++I+AF+I+N+ R
Sbjct: 30 PHHVAFVMDGNRRYARELGQQVESGHAEGFNALRRTLEICLRLRIRAVSIYAFAIDNFSR 89
Query: 71 PVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
E+ L+ L K L + L++ +K+R IG L D+L +++ E T+ N
Sbjct: 90 SEKEVGALMNLAKQRLAELCEHGDLLEEYGVKIRFIGQLDMLPPDVLQAVRDMEAMTQDN 149
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+++I+ K++F + S + VD SL +++ + D+++R
Sbjct: 150 -------------KNDIT--AKDVFDSL-GVSKAINTVDKSL---FVNPEEPEKLDILVR 190
Query: 188 TGGEKRLSDFLLWQVA-YSEFVFIPEYWPDF 217
T KRLSDF++WQ + ++ F+ YWP+F
Sbjct: 191 TSDVKRLSDFMMWQASDDTQLHFVKTYWPEF 221
>gi|209881398|ref|XP_002142137.1| dehydrodolichyl diphophate synthase protein [Cryptosporidium muris
RN66]
gi|209557743|gb|EEA07788.1| dehydrodolichyl diphophate synthase protein, putative
[Cryptosporidium muris RN66]
Length = 284
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 112/253 (44%), Gaps = 45/253 (17%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P+H+ I+DGN R+A GH+KG EV I+ +GIK +++F FS +N+
Sbjct: 18 PNHVAFILDGNRRYARLHSFESVIDGHKKGAEVVLNIIPLLKSLGIKYVSLFIFSRDNFL 77
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ +++L+ K L N K+ + G+ L ++I +L E ++T+
Sbjct: 78 RK-GEVENMMELLHRNFHKEKQWLYNLNAKILISGDMNLLPENIKAILNEIVNETKDKNE 136
Query: 130 LNLFIAFNYSSRDEISRAIK-------------------NIFQDIESGSVCSH------- 163
+ L + YS EI +++ N+ + + G +
Sbjct: 137 MILNLCCAYSCSTEIETSLRTFSKEFVDIREDIKDNNHRNVMKSTKLGCITDRNKLFYVK 196
Query: 164 -------DVDSSLIA---------KYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SE 206
DVDS ++ + L +P P ++IRT GE RLSDFL +Q + ++
Sbjct: 197 FEDLYDCDVDSHILNYKLKIREFWQCLYNPQIPPPKILIRTSGETRLSDFLFYQACFNTK 256
Query: 207 FVFIPEYWPDFSR 219
FI WP +R
Sbjct: 257 IYFIETLWPAINR 269
>gi|309804304|ref|ZP_07698381.1| di-trans,poly-cis-decaprenylcistransferase-like protein
[Lactobacillus iners LactinV 11V1-d]
gi|308163707|gb|EFO65977.1| di-trans,poly-cis-decaprenylcistransferase-like protein
[Lactobacillus iners LactinV 11V1-d]
Length = 74
Score = 87.8 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/72 (54%), Positives = 52/72 (72%), Gaps = 3/72 (4%)
Query: 169 LIAKYLDTS---DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHA 225
+++ YL T+ D DPDL+IRT GE+RLS+F+LWQ+AYSEF F YWPDF+ + F
Sbjct: 1 MVSDYLMTAKFGDYADPDLLIRTSGEERLSNFMLWQLAYSEFYFTKTYWPDFTTDEFKKI 60
Query: 226 LNQYNLRDRRFG 237
+ +Y RDRRFG
Sbjct: 61 VEEYQHRDRRFG 72
>gi|298675491|ref|YP_003727241.1| Di-trans-poly-cis-decaprenylcistransferase [Methanohalobium
evestigatum Z-7303]
gi|298288479|gb|ADI74445.1| Di-trans-poly-cis-decaprenylcistransferase [Methanohalobium
evestigatum Z-7303]
Length = 219
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 111/229 (48%), Gaps = 14/229 (6%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+I DGN RWA RGL + G+ G++ E++ ++G++ LT + F+++N +R
Sbjct: 4 PKHIGVIPDGNRRWALKRGLSKEKGYDYGVDPGIELIRLCKKMGVEELTFYGFTMDNTKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS-LDDDILCVLKEAEDQTRLNTG 129
SE K + + + V+G+ S + + L + N
Sbjct: 64 ----TSEQTKAFTNACIQAANGAINEGSQFLVVGDTESPMFPEKLIPYTSRKTFGDGNIK 119
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+NL + NY + ++ + +KN+ + + I +++ ++ DLIIR G
Sbjct: 120 VNLLV--NYGWQWDL-KGLKNL------DNKNKSTNNKKNIMYLINSKEISRIDLIIRWG 170
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
G +RLS FL Q YS+F + YWPDF + A++ Y+ +D GG
Sbjct: 171 GRRRLSGFLPVQSVYSDFYVVDNYWPDFKPKHLNDAIDWYDKQDITLGG 219
>gi|167534288|ref|XP_001748822.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772784|gb|EDQ86432.1| predicted protein [Monosiga brevicollis MX1]
Length = 379
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 92/175 (52%), Gaps = 3/175 (1%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
V ++ + P H+ IMDGN R+A R + R AGH G + E + ++ I+ ++++
Sbjct: 25 VQTLRAGKLPKHVAFIMDGNRRFARQRHIARIAGHSAGFDKLKETLQWCLDLDIRIVSVY 84
Query: 62 AFSINNWRRPVSEISELVKL-IKSF--LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
AFSI N+ R E+ L++L ++ F L L ++ + VR++GN L + + VL
Sbjct: 85 AFSIENFNRSKEEVDALMQLALEKFETLLDESEVLHQHQVSVRIVGNMDLLPEALQRVLG 144
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKY 173
+ +TR T L + F Y++RD+I+ A I ++ G + S + L+ Y
Sbjct: 145 KVVYETRAYTKAILNVCFAYTARDDITTAANRILTALDEGRIQSWLISVYLLEYY 199
>gi|289746139|ref|ZP_06505517.1| long-chain (C50) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis 02_1987]
gi|289686667|gb|EFD54155.1| long-chain (C50) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis 02_1987]
Length = 168
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 63/98 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ I+MDGNGRWA RGL R GH+ G V +I A E+GIK L+++AFS NW+R
Sbjct: 68 PNHVAIVMDGNGRWATQRGLARTEGHKMGEAVVIDIACGAIELGIKWLSLYAFSTENWKR 127
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS 108
E+ L+ + +++ +LKK +++R +G+R +
Sbjct: 128 SPEEVRFLMGFNRDVVRRRRDTLKKLGVRIRWVGSRPT 165
>gi|330975396|gb|EGH75462.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 95
Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 55/88 (62%)
Query: 155 IESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYW 214
+++G + D+ L+ L T D+P PDL IRTGGE R+S+FLLWQ+AY+E F +W
Sbjct: 1 VQAGHLQPEDITPQLLQTCLATGDLPLPDLCIRTGGEHRISNFLLWQLAYAELYFSDLFW 60
Query: 215 PDFSRELFFHALNQYNLRDRRFGGLSKK 242
PDF + AL + R RRFG S++
Sbjct: 61 PDFKHDAMRAALADFASRQRRFGKTSEQ 88
>gi|238584309|ref|XP_002390522.1| hypothetical protein MPER_10182 [Moniliophthora perniciosa FA553]
gi|215454020|gb|EEB91452.1| hypothetical protein MPER_10182 [Moniliophthora perniciosa FA553]
Length = 253
Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 26/208 (12%)
Query: 1 MVASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
++ ++++ P P H+ +MDGN R+A G GH +G E
Sbjct: 39 LLFKVLAAGPVPQHVAFVMDGNRRYARMLGKEVKHGHGEGYESLRR-------------A 85
Query: 60 IFAFSINNWRRPVSEISELVKL----IKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILC 115
I+AF+I N++R E+ L+ L + + G L + N+++ VIG +
Sbjct: 86 IYAFAIENFKRSKQEVDTLMALAVDKLDELCRHGDL-LNQYNVRLNVIGRTDLFPSHVKT 144
Query: 116 VLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD 175
V+K+ ED TR+N G L I Y S DEI A+ D ++ S L+ +
Sbjct: 145 VVKKPEDLTRMNDGFILNICMPYESTDEIRTAV-----DSAPITITPEKXTSRLMTT--E 197
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVA 203
P D++IRT G RLSD +LWQ A
Sbjct: 198 RGSPPRVDILIRTSGVTRLSDIMLWQRA 225
>gi|289670227|ref|ZP_06491302.1| undecaprenyl pyrophosphate synthase [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 110
Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 58/90 (64%)
Query: 153 QDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPE 212
+D+ +G + +D +L++ + +D+P PDL IRTGG+ R+S+FLLWQ+AY+E F
Sbjct: 10 EDVAAGRLQPEQIDEALLSSRVALADLPAPDLFIRTGGDTRISNFLLWQLAYTELWFTET 69
Query: 213 YWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
WP+F + AL+ Y R+RRFG S +
Sbjct: 70 LWPEFDAGVLQQALDDYAGRERRFGLTSAQ 99
>gi|171689896|ref|XP_001909887.1| hypothetical protein [Podospora anserina S mat+]
gi|170944910|emb|CAP71021.1| unnamed protein product [Podospora anserina S mat+]
Length = 351
Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 82/157 (52%), Gaps = 3/157 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ S+ P H+ MDGN R+A + + GH G E ++ + G+K +T+
Sbjct: 30 LIGSLSQGPIPGHVAFEMDGNRRYARSHKIETVEGHHLGFEALARVLEICYKCGVKVVTV 89
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFS+ N+ RP E+ L++L K L++ L + V+V+G + D+L V+
Sbjct: 90 YAFSLENFHRPKYEVDGLMQLAKVKLEQLIQHGELLDRYGASVKVLGRLDLIPPDVLEVV 149
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD 154
+ A T NT L I F Y+SR+E++ AI+ ++
Sbjct: 150 ERAVAATSHNTTCVLNICFPYTSREEMTTAIRTTVEE 186
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 165 VDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFF 223
+ I K+L T+ P D+ +RT G +RLSDF+LWQ + F+ +WP+F F
Sbjct: 267 ITPETIDKHLYTAGCPPLDIFVRTSGVERLSDFMLWQCHQDTHIFFLKCFWPEFDLWHFL 326
Query: 224 HALNQYNLRDRR 235
L ++ R ++
Sbjct: 327 PVLVEWQHRQKQ 338
>gi|149239562|ref|XP_001525657.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451150|gb|EDK45406.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 194
Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 75/128 (58%), Gaps = 4/128 (3%)
Query: 94 KKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLF-IAFNYSSRDEISRAIKNIF 152
K N + +++IGNR + +DIL L ED T+ N + + F+Y++RDE++ AIK+I
Sbjct: 11 KYNKVAIKIIGNREYIPEDILKDLVAIEDSTKNNVSKKVLNVCFSYTARDEMTHAIKSIM 70
Query: 153 QDIESGSVCSHDVD--SSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFI 210
Q G + D S++ + + +VP D++IRT G RLSDFLLWQ + S +
Sbjct: 71 QKRIDGKIQHRDEIGISTIESNFYFDDNVPPLDILIRTSGHTRLSDFLLWQCSTSCTIEF 130
Query: 211 PE-YWPDF 217
PE WPDF
Sbjct: 131 PETLWPDF 138
>gi|116200041|ref|XP_001225832.1| hypothetical protein CHGG_08176 [Chaetomium globosum CBS 148.51]
gi|88179455|gb|EAQ86923.1| hypothetical protein CHGG_08176 [Chaetomium globosum CBS 148.51]
Length = 1204
Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 47/157 (29%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ MDGN R+A + + GH G E ++ + G+K +T+
Sbjct: 30 LIGALSQGPIPQHVAFEMDGNRRYARSHKIETIEGHHLGFEALARVLEVCYKCGVKVVTV 89
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFS+ N+ RP E+ L++L K L++ L + +V+V+G + D+L V+
Sbjct: 90 YAFSLENFHRPKYEVDGLMQLAKLKLEQLIQHGELLDRYGARVKVLGRLDLIPPDVLEVV 149
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD 154
+ A T+ NT L I F Y+SR+E++ AI+ Q+
Sbjct: 150 ERAAATTKNNTDCVLNICFPYTSREEMTTAIRTTVQE 186
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 170 IAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPE-YWPDF 217
I ++ T+ P D+ +RT G +RLSDF+LWQ + +F + +WP+F
Sbjct: 277 IDSHMYTAGCPPLDIFVRTSGVERLSDFMLWQCHQNTHIFFLKCFWPEF 325
>gi|116754793|ref|YP_843911.1| undecaprenyl diphosphate synthase [Methanosaeta thermophila PT]
gi|116666244|gb|ABK15271.1| undecaprenyl diphosphate synthase [Methanosaeta thermophila PT]
Length = 186
Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 35/203 (17%)
Query: 35 GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLK 94
GH G+E F +++ +A +GI+NL I + +L ++S LK +
Sbjct: 18 GH--GLEKFRDLIEWSASLGIENLLIHVGQHSG---------DLASPLESMLKDAPADV- 65
Query: 95 KNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD 154
++ ++ G+++ I+ Y + E++ AI+++ D
Sbjct: 66 --------------------SIIDADRSKSTGKGGISVTISLGYGGKREVTEAIRSVLMD 105
Query: 155 IESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYW 214
+ +G + ++D + I +YL PDL+IR GG +RLSDF++WQ AYSE F W
Sbjct: 106 VAAGLIEPEEIDRNTIERYLRFKQ--KPDLVIRAGG-RRLSDFMIWQAAYSELYFTDVDW 162
Query: 215 PDFSRELFFHALNQYNLRDRRFG 237
R F A+ + R+RRFG
Sbjct: 163 ASLRRLDFLRAIRDFQRRERRFG 185
>gi|241745120|ref|XP_002405496.1| cis-prenyltransferase, putative [Ixodes scapularis]
gi|215505821|gb|EEC15315.1| cis-prenyltransferase, putative [Ixodes scapularis]
Length = 211
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 80/143 (55%), Gaps = 3/143 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGN R+A + + GH G E +E++ +E+GI +T++AFSI N++R
Sbjct: 26 PTHLAVIMDGNRRFAKKQNMQCVEGHLHGFEKLSEVLFWCSELGITEVTVYAFSIENFKR 85
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIK---VRVIGNRLSLDDDILCVLKEAEDQTRLN 127
E+ L+ L L+ ++K + K VRV+GN L ++ V+ + QT+ N
Sbjct: 86 SKEEVDGLMDLALKKLESLLNEMEKIHEKGLCVRVLGNLSYLPVEVQKVIADVVLQTQHN 145
Query: 128 TGLNLFIAFNYSSRDEISRAIKN 150
T L I +Y+SR+E+ KN
Sbjct: 146 TRCYLNICISYTSREEMCNEYKN 168
>gi|56206246|emb|CAI21498.1| dehydrodolichyl diphosphate synthase [Homo sapiens]
Length = 209
Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 87/161 (54%), Gaps = 4/161 (2%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A+++ + P P HI IMDGN R+A + R GH +G E + +GI +T+
Sbjct: 16 CANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R SE+ L+ L + S L + L+K+ + +RV+G+ L D+ ++
Sbjct: 76 YAFSIENFKRSKSEVDGLMDLARQKFSRLMEEKEKLQKHGVCIRVLGDLHLLPLDLQELI 135
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESG 158
+A T+ L + F Y+SR EIS A++ + +E G
Sbjct: 136 AQAVQATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQG 176
>gi|331092449|ref|ZP_08341274.1| hypothetical protein HMPREF9477_01917 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330401292|gb|EGG80881.1| hypothetical protein HMPREF9477_01917 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 206
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 108/232 (46%), Gaps = 33/232 (14%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI II DGN RWA L + G++KG++ +++ A E GI +T + F+ +N +R
Sbjct: 4 PKHIAIIPDGNRRWAVQHKLEKKDGYQKGLDPGVQVLRKAKEYGISEITYYGFTTDNCKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P + K L+ ++ N+ + V+GN E+E+ +
Sbjct: 64 PTEQKEAFKKACVDALR---LIKEEGNVSLLVLGN------------AESENFPKE---- 104
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSH--DVDSSLIAKYLD--TSDVPDPDLII 186
Y++R EI +I+ + ++ D D S IA D + ++ DL+I
Sbjct: 105 ----LIQYTTRQEIGNP------EIKVNFLVNYGWDWDLSGIAHRKDAYSKEISRIDLVI 154
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R G +RLS L Q Y++F + + WPDF F A++ Y+ +D GG
Sbjct: 155 RWGNMRRLSGMLPIQSVYADFYVVEDLWPDFDERDFDAAISWYDKQDITLGG 206
>gi|225559853|gb|EEH08135.1| dehydrodolichyl diphosphate synthetase [Ajellomyces capsulatus
G186AR]
Length = 412
Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 83/157 (52%), Gaps = 3/157 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ +MDGN R+A + R GH G E +I+ + G+K +T+
Sbjct: 32 LIGALREGPIPQHVAFVMDGNRRFARNHQIERVEGHHLGFEALAKILEVCYKAGVKVVTV 91
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+ + + + L + L + VRV+G R + ++L +
Sbjct: 92 YAFSIENFKRSKYEVDALMDMARVKLAQLSQHGDLLDRYGASVRVLGRRDLVKPEVLEAI 151
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD 154
+A + T N L I F Y+SRDE++ AI+N +
Sbjct: 152 DKAVEITSRNGDAILNICFPYTSRDEMTTAIRNTVTE 188
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 165 VDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFF 223
+ + ++ T P DL++RT G +RLSDF+LWQ +E VF+ WP F F
Sbjct: 296 ITQQTLTDHMLTVGCPPLDLLVRTSGVERLSDFMLWQCHQNTEVVFLETLWPSFDLWTFL 355
Query: 224 HALNQYNLRDRRFG 237
L ++ R R+ G
Sbjct: 356 PVLWEWQWRVRKQG 369
>gi|330941380|ref|XP_003306054.1| hypothetical protein PTT_19071 [Pyrenophora teres f. teres 0-1]
gi|311316647|gb|EFQ85851.1| hypothetical protein PTT_19071 [Pyrenophora teres f. teres 0-1]
Length = 360
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 85/170 (50%), Gaps = 6/170 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ S+ P H+ +MDGN R+A + GH G E I+ + G+K +TI
Sbjct: 30 LIGSLKQGPVPQHVAFVMDGNRRFARNHHIETVEGHNLGFESLARILEVCYKTGVKVVTI 89
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+ + K L++ L + VRV+G R + D+L +
Sbjct: 90 YAFSIENFKRSKHEVDALMSMAKVKLQQLAEHGALLDRYGASVRVLGQRELISPDVLMAV 149
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDS 167
+A T N L + F Y+SR EI+ A + + +E+ S H++ +
Sbjct: 150 DKAVAMTAHNKKAVLNVCFPYTSRHEITTA---VMKTVETYSTPIHNLTT 196
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 10/83 (12%)
Query: 136 FNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLS 195
N S +D++ F D ES + + + + T+D P DL++RT G +RLS
Sbjct: 254 INPSEKDDVQNG--PTFLDPES-------ISAQTLNDNMMTADAPPLDLLVRTSGVERLS 304
Query: 196 DFLLWQVAY-SEFVFIPEYWPDF 217
DF+LWQ + VF+ WP+F
Sbjct: 305 DFMLWQAHENTSIVFLKCLWPEF 327
>gi|295669340|ref|XP_002795218.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
gi|226285152|gb|EEH40718.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
Length = 404
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 82/153 (53%), Gaps = 3/153 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M+ ++ P H+ +MDGN R+A + + GH G E +I+ + G++ +T+
Sbjct: 27 MIGALREGPVPQHVAFVMDGNRRFARHHRIEKLEGHNLGFEALAKILEVCYKAGVRVVTV 86
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+ + + + L + L + VRV+G R L ++L +
Sbjct: 87 YAFSIENFKRSKYEVDALMDMARVKLAQLSQHGDLLDRYGASVRVLGRRDLLKPEVLEAI 146
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKN 150
+A + T N L I F Y+SRDEI+ AI++
Sbjct: 147 DKAVELTSRNGDAILNICFPYTSRDEITTAIRD 179
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 165 VDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFF 223
+ S I ++ T+ P DL+IRT G +RLSDF+LWQ +E VF+ WP+F F
Sbjct: 290 ITSQTITDHMLTAGCPALDLLIRTSGVERLSDFMLWQCHQGTEIVFLDTLWPNFDLWTFL 349
Query: 224 HALNQYNLRDRR 235
L ++ R R+
Sbjct: 350 PVLWEWQWRIRK 361
>gi|189193273|ref|XP_001932975.1| dehydrodolichyl diphosphate synthase [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187978539|gb|EDU45165.1| dehydrodolichyl diphosphate synthase [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 360
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 85/170 (50%), Gaps = 6/170 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ S+ P H+ +MDGN R+A + GH G E I+ + G+K +TI
Sbjct: 30 LIGSLKQGPVPQHVAFVMDGNRRFARNHHIETVEGHNLGFESLARILEVCYKTGVKVVTI 89
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+ + K L++ L + VRV+G R + D+L +
Sbjct: 90 YAFSIENFKRSKHEVDALMSMAKVKLQQLAEHGALLDRYGASVRVLGQRELISPDVLMAV 149
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDS 167
+A T N L + F Y+SR EI+ A + + +E+ S H++ +
Sbjct: 150 DKAVAMTAHNKKAVLNVCFPYTSRHEITTA---VMKTVETYSTPIHNLTT 196
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFFHALNQYN 230
T+D P DL++RT G +RLSDF+LWQ + VF+ WP+F F L ++
Sbjct: 285 TADAPPLDLLVRTSGVERLSDFMLWQAHENTSIVFLKCLWPEFDLWQFLPVLVEWQ 340
>gi|85014491|ref|XP_955741.1| undecaprenyl pyrophosphatase synthetase [Encephalitozoon cuniculi
GB-M1]
gi|74630068|sp|Q8SQJ8|RER2_ENCCU RecName: Full=Dehydrodolichyl diphosphate synthase; Short=DEDOL-PP
synthase
gi|19171435|emb|CAD27160.1| UNDECAPRENYL PYROPHOSPHATE SYNTHETASE [Encephalitozoon cuniculi
GB-M1]
Length = 270
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 112/229 (48%), Gaps = 35/229 (15%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
+I I DGN R+A GL KG++ E + GIK ++ F F+++N++R
Sbjct: 74 NIAFICDGNRRYARKLGLEDSFIKDKGLQKIYEFIEFGCFYGIKEISFFCFALSNFKRSP 133
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNI--KVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+++L+ L+K +++ K+ I K RV G L++D+ L + E++++ NT +
Sbjct: 134 EEVNKLMGLVKQKIERP----KEIGIRPKFRVYGRLDLLEEDVRKRLMDIEEESKNNTSI 189
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ I F YS+ DEI+R I+ SH D++IRT
Sbjct: 190 IVNIFFAYSAEDEITRGIQ----------FNSH------------------VDILIRTSN 221
Query: 191 EKRLSDFLLWQVAYSEFVFIPE-YWPDFSRELFFHALNQYNLRDRRFGG 238
KRLS+F++ QVA VF + WP+ + F L ++ L ++ G
Sbjct: 222 TKRLSNFMIRQVAKGTSVFFAKALWPELTTAHLFLILLKHRLENKYLLG 270
>gi|147920634|ref|YP_685567.1| undecaprenyl pyrophosphate synthetase [uncultured methanogenic
archaeon RC-I]
gi|110620963|emb|CAJ36241.1| undecaprenyl pyrophosphate synthetase [uncultured methanogenic
archaeon RC-I]
Length = 216
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L + ++ Y + E++ A++ I +D+ +G + D+D +++ +L +PDL IRTG
Sbjct: 111 LTVSLSIGYGGKHELTNALREIMEDVRAGKIQPKDIDEAMVEAHLIFR--CEPDLFIRTG 168
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+RLSDFL+WQ YSE F W +F + A+ Y LR RRFG
Sbjct: 169 -EERLSDFLIWQSVYSELYFTDVNWEEFRKVDLLRAIRDYQLRQRRFG 215
>gi|325089868|gb|EGC43178.1| dehydrodolichyl diphosphate synthetase [Ajellomyces capsulatus H88]
Length = 411
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 83/157 (52%), Gaps = 3/157 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ +MDGN R+A + R GH G E +I+ + G+K +T+
Sbjct: 32 LIGALREGPIPQHVAFVMDGNRRFARNHQIERVEGHHLGFEALAKILEVCYKAGVKVVTV 91
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+ + + + L + L + VRV+G R + ++L +
Sbjct: 92 YAFSIENFKRSKYEVDALMDMARVKLAQLSQHGDLLDRYGASVRVLGRRDLVKPEVLEAI 151
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD 154
+A + T N L I F Y+SRDE++ AI+N +
Sbjct: 152 DKAVEITSRNGDAILNICFPYTSRDEMTTAIRNTVTE 188
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 165 VDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFF 223
+ + ++ T P DL++RT G +RLSDF+LWQ +E VF+ WP F F
Sbjct: 296 ITQQTLTDHMLTVGCPPLDLLVRTSGVERLSDFMLWQCHQNTEVVFLETLWPSFDLWTFL 355
Query: 224 HALNQYNLRDRRFG 237
L ++ R R+ G
Sbjct: 356 PVLWEWQWRVRKQG 369
>gi|240276271|gb|EER39783.1| dehydrodolichyl diphosphate synthetase [Ajellomyces capsulatus
H143]
Length = 411
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 83/157 (52%), Gaps = 3/157 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ +MDGN R+A + R GH G E +I+ + G+K +T+
Sbjct: 32 LIGALREGPIPQHVAFVMDGNRRFARNHQIERVEGHHLGFEALAKILEVCYKAGVKVVTV 91
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+ + + + L + L + VRV+G R + ++L +
Sbjct: 92 YAFSIENFKRSKYEVDALMDMARVKLAQLSQHGDLLDRYGASVRVLGRRDLVKPEVLEAI 151
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD 154
+A + T N L I F Y+SRDE++ AI+N +
Sbjct: 152 DKAVEITSRNGDAILNICFPYTSRDEMTTAIRNTVTE 188
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 165 VDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFF 223
+ + ++ T P DL++RT G +RLSDF+LWQ +E VF+ WP F F
Sbjct: 296 ITQQTLTDHMLTVGCPPLDLLVRTSGVERLSDFMLWQCHQNTEVVFLETLWPSFDLWTFL 355
Query: 224 HALNQYNLRDRRFG 237
L ++ R R+ G
Sbjct: 356 PVLWEWQWRVRKQG 369
>gi|226290086|gb|EEH45570.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 404
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 82/153 (53%), Gaps = 3/153 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M+ ++ P H+ +MDGN R+A + + GH G E +I+ + G++ +T+
Sbjct: 27 MIGALREGPVPQHVAFVMDGNRRFARHHRIEKLEGHNLGFEALAKILEVCYKAGVRVVTV 86
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+ + + + L + L + VRV+G R L ++L +
Sbjct: 87 YAFSIENFKRSKYEVDALMDMARVKLAQLSQHGDLLDRYGASVRVLGRRDLLKPEVLEAI 146
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKN 150
+A + T N L I F Y+SRDEI+ AI++
Sbjct: 147 DKAVELTSRNGDAILNICFPYTSRDEITTAIRD 179
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 165 VDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFF 223
+ S I ++ T+ P DL+IRT G +RLSDF+LWQ +E VF+ WP+F F
Sbjct: 290 ITSQTITDHMLTAGCPALDLLIRTSGVERLSDFMLWQCHQDTEIVFLDTLWPNFDLWTFL 349
Query: 224 HALNQYNLRDRR 235
L ++ R R+
Sbjct: 350 PVLWEWQWRIRK 361
>gi|225682657|gb|EEH20941.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 409
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 82/153 (53%), Gaps = 3/153 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M+ ++ P H+ +MDGN R+A + + GH G E +I+ + G++ +T+
Sbjct: 32 MIGALREGPVPQHVAFVMDGNRRFARHHRIEKLEGHNLGFEALAKILEVCYKAGVRVVTV 91
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+ + + + L + L + VRV+G R L ++L +
Sbjct: 92 YAFSIENFKRSKYEVDALMDMARVKLAQLSQHGDLLDRYGASVRVLGRRDLLKPEVLEAI 151
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKN 150
+A + T N L I F Y+SRDEI+ AI++
Sbjct: 152 DKAVELTSRNGDAILNICFPYTSRDEITTAIRD 184
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 165 VDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFF 223
+ S I ++ T+ P D++IRT G +RLSDF+LWQ +E VF+ WP+F F
Sbjct: 295 ITSQTITDHMLTAGCPALDILIRTSGVERLSDFMLWQCHQDTEIVFLDTLWPNFDLWTFL 354
Query: 224 HALNQYNLRDRR 235
L ++ R R+
Sbjct: 355 PVLWEWQWRIRK 366
>gi|315042888|ref|XP_003170820.1| dehydrodolichyl diphosphate synthase [Arthroderma gypseum CBS
118893]
gi|311344609|gb|EFR03812.1| dehydrodolichyl diphosphate synthase [Arthroderma gypseum CBS
118893]
Length = 416
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 84/157 (53%), Gaps = 7/157 (4%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAA----AEVGIK 56
++ ++ P H+ +MDGN R+A +G+ R GH G E ++ + + GIK
Sbjct: 31 LIGALRQGPIPQHVAFVMDGNRRFARNQGIERVEGHNLGFEALAKVFPFSFVIQTDSGIK 90
Query: 57 NLTIFAFSINNWRRPVSEISELVKLIK-SFLKKGFYS--LKKNNIKVRVIGNRLSLDDDI 113
+TI+AFSI N++R E+ L+++ K L+ + L++ VRV+G R + D+
Sbjct: 91 VVTIYAFSIENFKRSKYEVDALMEMAKLKLLQLSEHGELLERYGASVRVLGRRDQIRPDV 150
Query: 114 LCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKN 150
L + + T N L I F Y+SRDEI+ A++N
Sbjct: 151 LEAVDRTVELTSGNGDAILNICFPYTSRDEITSAVRN 187
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 165 VDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFF 223
+ + + ++ T+ P D++IRT G +RLSDF+LWQ ++ +F+ WP FS F
Sbjct: 305 IATQTLNDHMLTAGCPPLDILIRTSGVERLSDFMLWQCHQETQIIFLDTLWPAFSLWEFL 364
Query: 224 HALNQYNLRDRRFG 237
+ + R R+ G
Sbjct: 365 PVIWDWQRRIRKTG 378
>gi|237800147|ref|ZP_04588608.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|331023004|gb|EGI03061.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv.
oryzae str. 1_6]
Length = 99
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 55/89 (61%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
SS P H+ IIMDGN RWA R LP AGH+ G++ ++ AE ++ LT+FAFS N
Sbjct: 10 SSVPRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAEAKVEVLTLFAFSSEN 69
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKN 96
W+RP E+ L++L + L++ L +N
Sbjct: 70 WQRPAEEVGALMELFFTALRRETKRLNEN 98
>gi|311258746|ref|XP_003127762.1| PREDICTED: dehydrodolichyl diphosphate synthase-like [Sus scrofa]
Length = 289
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 87/161 (54%), Gaps = 4/161 (2%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A+++ + P P HI IMDGN R+A + R GH +G E + +G+ +T+
Sbjct: 16 CANIIKAGPMPKHIAFIMDGNRRYARKCQVERQEGHSQGFNKLAETLRWCLNLGVLEVTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R SE+ L+ L + S L + L+K+ + +RV+G+ L D+ ++
Sbjct: 76 YAFSIENFKRSKSEVDGLMDLARQKFSRLMEEQEKLQKHGVCIRVLGDLHLLPLDLQELI 135
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESG 158
+A T+ L + F Y+SR EIS A++ + +E G
Sbjct: 136 AQAVQATKNYNRCFLNVCFAYTSRHEISNAVREMAWGVEQG 176
>gi|329942494|ref|ZP_08291304.1| di-trans,poly-cis-decaprenylcistransferase [Chlamydophila psittaci
Cal10]
gi|328815404|gb|EGF85392.1| di-trans,poly-cis-decaprenylcistransferase [Chlamydophila psittaci
Cal10]
Length = 67
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/65 (55%), Positives = 44/65 (67%)
Query: 173 YLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLR 232
YLDTS++PDPDL+IRTGGE R+S+FLLWQ+AY+E WPDF A+ Y R
Sbjct: 2 YLDTSEIPDPDLLIRTGGEMRVSNFLLWQIAYTELYVTDVLWPDFKPYHLLDAIKAYQHR 61
Query: 233 DRRFG 237
RR G
Sbjct: 62 SRRGG 66
>gi|312214381|emb|CBX94373.1| similar to undecaprenyl diphosphate synthase family protein
[Leptosphaeria maculans]
Length = 359
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 76/151 (50%), Gaps = 3/151 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ S+ P H+ +MDGN R+A + GH G E I+ + G+K +TI
Sbjct: 30 LIGSLKQGPIPQHVAFVMDGNRRFARNHHIETVEGHNLGFESLARILEVCYKTGVKVVTI 89
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+ + K L++ L + VRV+G R + D+L +
Sbjct: 90 YAFSIENFKRSKHEVDALMSMAKVKLQQLAEHGALLDRYGASVRVLGQRALIQPDVLMAV 149
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAI 148
+A T N L + F Y+SR EI+ A+
Sbjct: 150 DKAVAMTAHNKKAVLNVCFPYTSRHEITTAV 180
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 14/117 (11%)
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV 179
AED+ +T N S +D++S + F D E+ + + + + T+D
Sbjct: 241 AEDERSSSTS----TVINPSEKDDLSYS--PAFLDPET-------ITAQTLTDNMMTADA 287
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
P DL++RT G +RLSDF+LWQ + VF+ WP+F F L ++ + ++
Sbjct: 288 PPLDLLVRTSGVQRLSDFMLWQCHENTSIVFLKCLWPEFDLWHFLPVLVEWQWQQKK 344
>gi|167957223|ref|ZP_02544297.1| Undecaprenyl pyrophosphate synthetase [candidate division TM7
single-cell isolate TM7c]
Length = 88
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 171 AKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
+KYL +D PDPDL+IRT GE R+S+FLLWQ+AYSEF WPDF + A+ +N
Sbjct: 18 SKYL-YNDFPDPDLVIRTSGEMRISNFLLWQIAYSEFYITDTLWPDFDEKEIDKAIESFN 76
Query: 231 LRDRRFGGL 239
R+RRFGG+
Sbjct: 77 QRERRFGGV 85
>gi|91806246|gb|ABE65851.1| dehydrodolichyl diphosphate synthase/DEDOL-PP synthase [Arabidopsis
thaliana]
Length = 126
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I+DGN RWA GL GH G + EI E+GI ++ FAFS NW R
Sbjct: 2 PRHVSFILDGNRRWAKRDGLTTAQGHEAGTKRIIEIAEVCFELGIHTVSAFAFSTENWGR 61
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
E+ L+ L +LK ++ ++V VIGN+ + + +L + E E+ T+
Sbjct: 62 DKFEVKCLMSLFNHYLKSNIQYFQRKEVRVSVIGNKTKIPESLLKEIHEIEEATK 116
>gi|327357575|gb|EGE86432.1| prenyltransferase [Ajellomyces dermatitidis ATCC 18188]
Length = 412
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 82/153 (53%), Gaps = 3/153 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ +MDGN R+A + + GH G E +I+ + G+K +T+
Sbjct: 32 LIGALREGPIPQHVAFVMDGNRRFARNHRIEKVEGHNLGFEALAKILEVCYKAGVKVVTV 91
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+ + + + L + L + VRV+G R + ++L +
Sbjct: 92 YAFSIENFKRSKYEVDALMDMARVKLAQLSQHGDLLDRYGASVRVLGRRDLVKPEVLEAI 151
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKN 150
+A + T N L I F Y+SRDE++ AI+N
Sbjct: 152 DKAVELTSRNGDAILNICFPYTSRDEMTTAIRN 184
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 165 VDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFF 223
+ + ++ T+ P DL++RT G +RLSDF+LWQ +E VF+ WP F F
Sbjct: 296 ITQQTLTDHMLTAGCPPLDLLVRTSGVERLSDFMLWQCHQNTEIVFLDILWPSFDLWTFL 355
Query: 224 HALNQYNLRDRRFGG 238
L ++ R R+ GG
Sbjct: 356 PVLWEWQWRVRKQGG 370
>gi|261191681|ref|XP_002622248.1| prenyltransferase [Ajellomyces dermatitidis SLH14081]
gi|239589564|gb|EEQ72207.1| prenyltransferase [Ajellomyces dermatitidis SLH14081]
gi|239608690|gb|EEQ85677.1| prenyltransferase [Ajellomyces dermatitidis ER-3]
Length = 412
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 82/153 (53%), Gaps = 3/153 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ +MDGN R+A + + GH G E +I+ + G+K +T+
Sbjct: 32 LIGALREGPIPQHVAFVMDGNRRFARNHRIEKVEGHNLGFEALAKILEVCYKAGVKVVTV 91
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+ + + + L + L + VRV+G R + ++L +
Sbjct: 92 YAFSIENFKRSKYEVDALMDMARVKLAQLSQHGDLLDRYGASVRVLGRRDLVKPEVLEAI 151
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKN 150
+A + T N L I F Y+SRDE++ AI+N
Sbjct: 152 DKAVELTSRNGDAILNICFPYTSRDEMTTAIRN 184
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 165 VDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFF 223
+ + ++ T+ P DL++RT G +RLSDF+LWQ +E VF+ WP F F
Sbjct: 296 ITQQTLTDHMLTAGCPPLDLLVRTSGVERLSDFMLWQCHQNTEIVFLDILWPSFDLWTFL 355
Query: 224 HALNQYNLRDRRFGG 238
L ++ R R+ GG
Sbjct: 356 PVLWEWQWRVRKQGG 370
>gi|169838900|ref|ZP_02872088.1| Undecaprenyl pyrophosphate synthetase [candidate division TM7
single-cell isolate TM7a]
Length = 115
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 45/69 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA RG R GHR G I+ A E+G+K LT++AFS NW+R
Sbjct: 9 PRHIAIIMDGNGRWAKERGKIRLEGHRAGAASLERILRYAGEIGVKYLTVYAFSTENWKR 68
Query: 71 PVSEISELV 79
P E++ L+
Sbjct: 69 PQKEVNGLM 77
>gi|210616165|ref|ZP_03290968.1| hypothetical protein CLONEX_03187 [Clostridium nexile DSM 1787]
gi|210149927|gb|EEA80936.1| hypothetical protein CLONEX_03187 [Clostridium nexile DSM 1787]
Length = 224
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 110/229 (48%), Gaps = 18/229 (7%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI II DGN RWA + + G++ G+ E++ A E G+ +T + F+++N +R
Sbjct: 13 PKHIAIIPDGNRRWATQHQMEKKDGYQHGLNPGLEVLRKAKEYGVAEITYYGFTVDNCKR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLD-DDILCVLKEAEDQTRLNTG 129
P + + K ++ K+ N+ + V+G+ S+ + L + ++ +
Sbjct: 73 PKVQQNAFKKACVDAVR---LIQKEGNVSLLVVGDSSSVHFPEELLKYTQRKEIGIADIK 129
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+N + NY ++S AI+ + G +DV + + +K D+ DL+IR G
Sbjct: 130 VNFLV--NYGWEWDLS-AIR------KEGMEQENDVMTQIHSK-----DISRIDLVIRWG 175
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+RLS L Q Y++F + WPD+ F A+ Y+ +D GG
Sbjct: 176 NMRRLSGMLPVQSVYADFYVVENLWPDYKERDFDKAIRWYDKQDVTLGG 224
>gi|154287464|ref|XP_001544527.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150408168|gb|EDN03709.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 407
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 82/157 (52%), Gaps = 3/157 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ +MDGN R+A + R GH G E +I+ + G+K +T+
Sbjct: 27 LIGALREGPIPQHVAFVMDGNRRFARNHQIERVEGHHLGFEALAKILKMCYKAGVKGVTV 86
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E L+ + + + L + L + VRV+G R + ++L +
Sbjct: 87 YAFSIENFKRAKYEGDALMDMGRVKLAQLSQHGDLLDRYGASVRVLGRRDLVKPEVLEAI 146
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD 154
+A + T N L I F Y+SRDE++ AI+N +
Sbjct: 147 DKAVEITSQNGDAVLNICFPYTSRDEMTTAIRNTVTE 183
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 165 VDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFF 223
+ + ++ T P DL++RT G +RLSDF+LWQ +E VF+ WP F F
Sbjct: 291 ITQQTLTDHMLTVGCPPLDLLVRTSGVERLSDFMLWQCHQNTEVVFLETLWPSFDLWTFL 350
Query: 224 HALNQYNLRDRRFG 237
L ++ R R+ G
Sbjct: 351 PVLWEWQWRVRKQG 364
>gi|260200121|ref|ZP_05767612.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T46]
gi|289442513|ref|ZP_06432257.1| undecaprenyl diphosphate synthase [Mycobacterium tuberculosis T46]
gi|289415432|gb|EFD12672.1| undecaprenyl diphosphate synthase [Mycobacterium tuberculosis T46]
Length = 216
Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 97/187 (51%), Gaps = 7/187 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI ++ DGN RWA + G + G+R G E++ E GI+ T++ S N +
Sbjct: 32 PRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWCHEAGIELATVYLLSTENLQ 91
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E++ L+++I +++ N+ VR +G+ + ++ L+ A + T
Sbjct: 92 RDPDELAALIEIITDVVEE--ICAPANHWSVRTVGDLGLIGEEPARRLRGAVESTPEVAS 149
Query: 130 LNLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDSSL---IAKYLDTSDVPDPDLI 185
++ +A Y R EI A++ + +++ +G+ VD+ I++ L TS PDPDL+
Sbjct: 150 FHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVDAVTVEGISENLYTSGQPDPDLV 209
Query: 186 IRTGGEK 192
IRT GE+
Sbjct: 210 IRTSGEQ 216
>gi|296084797|emb|CBI25938.3| unnamed protein product [Vitis vinifera]
Length = 242
Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 102/222 (45%), Gaps = 22/222 (9%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P+HI IMDGN R+A L AG++ G ++ ++G+K + I+AFSI+N
Sbjct: 26 SHIPNHIAFIMDGNRRYAKKWKLEEGAGYKAGFLALLSMIKYCYKLGVKYIAIYAFSIDN 85
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
+RR E+ ++ L+ ++ N V V+ S D+ + V + +D+
Sbjct: 86 FRRRPQEVQYVMDLMHEKIQGLLKEQSIVNQHVCVV--YTSSDEIVHSVQESCKDKWGET 143
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
LN N DEI D+E K++ PDPD++IR
Sbjct: 144 QVLNPSKGCNVGGDDEIQDYSIIKLVDLE---------------KHMYMRFAPDPDILIR 188
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPE-YWPDFS-RELFFHALN 227
T G LS+FLLWQ A + ++ P WP+ R L + LN
Sbjct: 189 TSG--CLSNFLLWQ-ATTCLLYCPTALWPEVGLRHLMWAVLN 227
>gi|226327050|ref|ZP_03802568.1| hypothetical protein PROPEN_00911 [Proteus penneri ATCC 35198]
gi|225204268|gb|EEG86622.1| hypothetical protein PROPEN_00911 [Proteus penneri ATCC 35198]
Length = 89
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 51/75 (68%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S+S P H+ IIMDGNGRWA +G R GHR GI+ + V+ + + I++LT++AFS
Sbjct: 9 SASKPKHVAIIMDGNGRWAKKQGKLRVTGHRAGIKAVRDAVSFSVKHKIESLTLYAFSSE 68
Query: 67 NWRRPVSEISELVKL 81
NW RP E+S L++L
Sbjct: 69 NWNRPEQEVSSLMEL 83
>gi|123471694|ref|XP_001319045.1| undecaprenyl diphosphate synthase family protein [Trichomonas
vaginalis G3]
gi|121901819|gb|EAY06822.1| undecaprenyl diphosphate synthase family protein [Trichomonas
vaginalis G3]
Length = 240
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 107/219 (48%), Gaps = 26/219 (11%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEV-GIKNLTIFAFSINNW 68
P H+ I+MDGN R+A L GH+ G + E++ +++ GI+ L+++AFSI N+
Sbjct: 18 PRHVAIVMDGNRRYARKEHLESITMGHKMGADKLKEVIEWFSKLNGIEMLSVYAFSILNF 77
Query: 69 RRPVSEISELVKLIKSFLKK-----GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
+R E++ L+ L +S K+ F++ KNN K+ IG L+ ++ +
Sbjct: 78 QRAQQEVNGLMDLAESTFKELADNPEFFT--KNNCKINFIGRIEMLEQRVIDQINRVNQL 135
Query: 124 TRLNTGLNLFIAFNYSSRDEISRA----IKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV 179
N L I Y+S DEI + I+N F+ + + K+L
Sbjct: 136 GPKNPKFILNICVCYTSHDEIEHSRDECIENQFEP-----------NYENVFKHLQLP-- 182
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS 218
DL+IRT G R+S++LL Q + + + + WP+ S
Sbjct: 183 MKVDLLIRTSGVMRMSNYLLLQCSDANIIVTDKLWPELS 221
>gi|255561403|ref|XP_002521712.1| undecaprenyl diphosphate synthase, putative [Ricinus communis]
gi|223539103|gb|EEF40699.1| undecaprenyl diphosphate synthase, putative [Ricinus communis]
Length = 381
Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 5 MMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++S P P+HI IMDGN R+A + AGHR G I+ E+G+K +T++AF
Sbjct: 27 ILSVGPIPNHIAFIMDGNRRYAKKENMKEGAGHRAGFSALISILKYCYELGVKYVTVYAF 86
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEA 120
SI+N++R E+ +L+ L+ +++ + + I+V IGN L++ + ++
Sbjct: 87 SIDNFKRRPDEVQDLMDLMLEKIEELLKEESIVNQYGIRVYFIGNLTLLNEPVRIAAEKV 146
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIK 149
T NT I Y+S DEI A++
Sbjct: 147 MRATANNTKCTFLICIAYTSCDEIVHAVQ 175
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPD 216
P+PD++IR+ GE RLS+FLLWQ + WP+
Sbjct: 294 PEPDILIRSSGETRLSNFLLWQASDCMLYSPDALWPE 330
>gi|68479121|ref|XP_716366.1| hypothetical protein CaO19.12700 [Candida albicans SC5314]
gi|68479252|ref|XP_716305.1| hypothetical protein CaO19.5236 [Candida albicans SC5314]
gi|46437971|gb|EAK97309.1| hypothetical protein CaO19.5236 [Candida albicans SC5314]
gi|46438033|gb|EAK97370.1| hypothetical protein CaO19.12700 [Candida albicans SC5314]
gi|238878379|gb|EEQ42017.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 191
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 72/126 (57%), Gaps = 4/126 (3%)
Query: 96 NNIKVRVIGNRLSLDDDILCVLKEAEDQTR-LNTGLNLFIAFNYSSRDEISRAIKNIFQD 154
N +++R+IGNR + +DIL L+ E+ T+ + L + F Y++RDEI+ AIK I
Sbjct: 12 NKVRIRIIGNRSFIPEDILKDLENVEETTKDFGSKKTLNVCFPYTARDEITYAIKTIASK 71
Query: 155 IESGSVCSHD-VDSSLIAK-YLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPE 212
SG + + + + I K + DVP D++IRT G RLSDFLLWQ + P+
Sbjct: 72 RVSGELNDRNKITTKTIEKNFYFGDDVPPLDILIRTSGHTRLSDFLLWQCTTECTIEFPD 131
Query: 213 -YWPDF 217
WPDF
Sbjct: 132 VLWPDF 137
>gi|255728575|ref|XP_002549213.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240133529|gb|EER33085.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 195
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 73/128 (57%), Gaps = 4/128 (3%)
Query: 94 KKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL-NLFIAFNYSSRDEISRAIKNIF 152
+ N +++R+IGNR + DIL L+ E+ T+ ++ L + F Y++RDEI+ A+K I
Sbjct: 11 RYNKVRIRIIGNRSYIPSDILKDLENIEEITKDHSSKKTLNVCFPYTARDEITYAVKRIA 70
Query: 153 QDIESGSVCSHD--VDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFI 210
+ +G + S D ++ + DVP D++IRT G RLSDFLLWQ +
Sbjct: 71 EKRVNGEITSRDEITTKTIEENFYFGGDVPPLDILIRTSGHTRLSDFLLWQCNTECTIEF 130
Query: 211 PE-YWPDF 217
P+ WPDF
Sbjct: 131 PDVLWPDF 138
>gi|145630003|ref|ZP_01785785.1| hypothetical protein CGSHi22421_08128 [Haemophilus influenzae
R3021]
gi|144984284|gb|EDJ91707.1| hypothetical protein CGSHi22421_08128 [Haemophilus influenzae
R3021]
Length = 81
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 50/75 (66%)
Query: 164 DVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFF 223
D+++S +L T + P DL+IRT GE+R+S+FLLWQ+AY+E F WPDF++ F
Sbjct: 5 DINNSTFQHHLATQNAPPVDLLIRTSGEQRISNFLLWQIAYAELYFSDVLWPDFNQLEFN 64
Query: 224 HALNQYNLRDRRFGG 238
A+ Y R RRFGG
Sbjct: 65 RAIASYQQRHRRFGG 79
>gi|255582903|ref|XP_002532223.1| undecaprenyl diphosphate synthase, putative [Ricinus communis]
gi|223528080|gb|EEF30154.1| undecaprenyl diphosphate synthase, putative [Ricinus communis]
Length = 370
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 78/150 (52%), Gaps = 9/150 (6%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGN R+ L AG+R G ++ E+G+K +TIFAF I+N++R
Sbjct: 34 PSHLSVIMDGNRRFTKKENLKPGAGYRAGFSALMSMLKYCYELGVKYVTIFAFGIDNFKR 93
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNI------KVRVIGNRLSLDDDILCVLKEAEDQT 124
E+ ++ L+ L+K LK+ +I +V IGN LD+ + ++ T
Sbjct: 94 RSDEVQVIMDLM---LEKTLGMLKEESIVHQYGVRVYFIGNLKLLDEPLRVAAEKVMRTT 150
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQD 154
NT L I YSS DEI+ A++ Q+
Sbjct: 151 SNNTKFVLLICVAYSSTDEIAHAVQESCQE 180
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 170 IAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS-RELFFHALN 227
+ K++ + PDPD++IRT GE RLS+FLLWQ WP+F R L + LN
Sbjct: 297 LQKHMYMAVAPDPDILIRTAGETRLSNFLLWQAGDCPLYSPDVLWPEFGLRHLVWAVLN 355
>gi|20093189|ref|NP_619264.1| undecaprenyl diphosphate synthase [Methanosarcina acetivorans C2A]
gi|19918535|gb|AAM07744.1| undecaprenyl diphosphate synthase [Methanosarcina acetivorans C2A]
Length = 224
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
++++ + R EI+RA+ +I +++++GSV +VD ++ +L +PD++IR+GG+
Sbjct: 121 VYVSLGFGGRGEITRAVLSILEEVKTGSVSPEEVDEKMLESHLLVKH--EPDIMIRSGGQ 178
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
K LSDFL+WQ YSE F W D R + + R RR+G
Sbjct: 179 K-LSDFLVWQSVYSELYFTDVNWKDVRRIDLLRVIRDFQKRQRRYG 223
>gi|302523390|ref|ZP_07275732.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. SPB78]
gi|302432285|gb|EFL04101.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. SPB78]
Length = 102
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 49/80 (61%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A+ + P H+ +MDGNGRWA R LPR AGHR +I+ AA GI+ L+++A
Sbjct: 22 AATRTGRGPRHVACVMDGNGRWAERRSLPRTAGHRAAETTVIDIIEAARSAGIEWLSLYA 81
Query: 63 FSINNWRRPVSEISELVKLI 82
FS NW RP +E+ L+ L+
Sbjct: 82 FSTENWSRPSAEVGYLMDLV 101
>gi|303390895|ref|XP_003073678.1| undecaprenyl pyrophosphatase synthetase [Encephalitozoon
intestinalis ATCC 50506]
gi|303302825|gb|ADM12318.1| undecaprenyl pyrophosphatase synthetase [Encephalitozoon
intestinalis ATCC 50506]
Length = 246
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 104/225 (46%), Gaps = 35/225 (15%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
+ I DGN R+ G G++ E + G+K ++ F F+++N RR
Sbjct: 50 RVAFICDGNRRYMKKIGQKDKFTRDPGLQKIYEFINFGYFYGLKEVSFFCFALSNLRRTP 109
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVR--VIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E++ ++ +I+ +K KK +IK + V G LD D+ L E E +T NT +
Sbjct: 110 EEVNGIMNIIRKKIKNP----KKTSIKPKFLVYGRLDLLDSDVRNKLIEVEKETENNTDI 165
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ I F YSS DEI+R IK DS + D++IRTG
Sbjct: 166 VVNIFFAYSSEDEINRGIK---------------FDSKV-------------DILIRTGD 197
Query: 191 EKRLSDFLLWQVAYSEFVFIPE-YWPDFSRELFFHALNQYNLRDR 234
KRLS+F++ QVA VF + WP+ + F L ++ L ++
Sbjct: 198 AKRLSNFMVRQVATGTSVFFAKVLWPELTIVHLFLILLKHQLENK 242
>gi|14601375|ref|NP_147911.1| undecaprenyl pyrophosphate synthetase [Aeropyrum pernix K1]
gi|42559900|sp|Q9YC66|UPPS_AERPE RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|5105068|dbj|BAA80382.1| undecaprenyl pyrophosphate synthetase [Aeropyrum pernix K1]
Length = 219
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 108/232 (46%), Gaps = 22/232 (9%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEV--GIKNLTIFAFSINNW 68
P IGII DGN RWA+ RG + G I+ + I+++ ++ S +N
Sbjct: 4 PRAIGIIPDGNRRWASLRGENLYIAYYTGYRNVKRILTYIRDFYPAIRSVYLYVLSRDNC 63
Query: 69 -RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIG--NRLSLDDDILCVLKEAEDQTR 125
+R +E+S L ++++ +++ ++K + ++G N +L D+I L
Sbjct: 64 SKRSRAELSILYRIMRRSIERDIAEIEKGGASLVIVGDINHPNLPDNIRESLAPYHFDMY 123
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
L G R ++ + F +IE H +L ++ LD + DL+
Sbjct: 124 LKKGSLP------DGRRVVAGLCYDPFWEIE------HYTPKTLPSRLLD-----EIDLV 166
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRTGGEKRLS F Y+E FI + WPDF+RE A+ ++ R R G
Sbjct: 167 IRTGGEKRLSSFFPLLTRYAELYFIDKLWPDFTREDLDRAVQWFSTRRRPMG 218
>gi|322368362|ref|ZP_08042931.1| hypothetical protein ZOD2009_02730 [Haladaptatus paucihalophilus
DX253]
gi|320552378|gb|EFW94023.1| hypothetical protein ZOD2009_02730 [Haladaptatus paucihalophilus
DX253]
Length = 202
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 134 IAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKR 193
I+ + E + A++ + +D+E+G+V + D+D S I L DPDL+I+TG E R
Sbjct: 101 ISIGLGGKHEFAEAVRAVAEDVEAGTVSAADIDESEIESRLVFP--TDPDLVIKTGAE-R 157
Query: 194 LSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
LSDF++WQ YSE F W DF + + A+ Y R RRFG
Sbjct: 158 LSDFMIWQSVYSELYFTDVNWRDFRKRDYLRAIFDYKNRQRRFG 201
>gi|62320372|dbj|BAD94770.1| dehydrodolichyl diphosphate - like protein [Arabidopsis thaliana]
Length = 146
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 41/61 (67%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RGL GHR G+E EIV + GI+ LT+FAFS +NW R
Sbjct: 78 PKHVAIIMDGNGRWAKNRGLQPWDGHRAGVEALKEIVELCGKWGIQVLTVFAFSTDNWIR 137
Query: 71 P 71
P
Sbjct: 138 P 138
>gi|256079781|ref|XP_002576163.1| dehydrodolichyl diphosphate synthase (dedol-pp synthase)
[Schistosoma mansoni]
gi|238661425|emb|CAZ32398.1| dehydrodolichyl diphosphate synthase (dedol-pp synthase), putative
[Schistosoma mansoni]
Length = 249
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 79/141 (56%), Gaps = 2/141 (1%)
Query: 93 LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIF 152
LK ++I +RVIGN L + + + TR ++ L I Y+SR++I+ A++ +
Sbjct: 50 LKADDICIRVIGNLALLPAKVQSLAAQLMLVTRNHSKSILNICMAYNSRNDITNAMEIVR 109
Query: 153 QDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFV--FI 210
++ G + D+ L++K L T DL+IRT GE RLSDFL WQV+ ++ + FI
Sbjct: 110 LGVKEGKIIPSDITRELLSKCLYTRLSKPLDLLIRTSGEIRLSDFLTWQVSENDTIYKFI 169
Query: 211 PEYWPDFSRELFFHALNQYNL 231
YWP+FS F ++ Y +
Sbjct: 170 NNYWPEFSWWDFLSSIIHYQM 190
>gi|255582905|ref|XP_002532224.1| undecaprenyl diphosphate synthase, putative [Ricinus communis]
gi|223528081|gb|EEF30155.1| undecaprenyl diphosphate synthase, putative [Ricinus communis]
Length = 363
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 78/150 (52%), Gaps = 9/150 (6%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IMDGN R+ L AG+R G ++ E+G+K++TIFAF I+N++R
Sbjct: 26 PSHLSFIMDGNRRFTKKENLKPGAGYRAGFLALMSMLKYCYELGVKHVTIFAFGIDNFKR 85
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNN------IKVRVIGNRLSLDDDILCVLKEAEDQT 124
E+ ++ LI L+K LK+ + I+V IGN LD+ + ++ T
Sbjct: 86 RPDEVRFIMDLI---LEKTLGLLKEESIVHQYGIRVHFIGNLKLLDEPLRVAAEKVTRTT 142
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQD 154
NT L I YSS +EI+ A++ ++
Sbjct: 143 SSNTKFVLLICVAYSSTNEITHAVQQYCKE 172
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 152 FQDIESGSVCSHDVDSSL-IAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFI 210
+D E + SH + + + K++ + PDPD++IRT GE RLS+FLLWQ +
Sbjct: 271 IRDEEREKMQSHSIIKQVDLEKHMPMAVAPDPDILIRTSGETRLSNFLLWQAGDCQGYSP 330
Query: 211 PEYWPDFS-RELFFHALN-QYN 230
WPD R+L + LN QYN
Sbjct: 331 DALWPDIVLRQLVWAVLNFQYN 352
>gi|67538860|ref|XP_663204.1| hypothetical protein AN5600.2 [Aspergillus nidulans FGSC A4]
gi|40743053|gb|EAA62243.1| hypothetical protein AN5600.2 [Aspergillus nidulans FGSC A4]
Length = 356
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 3/135 (2%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGN R+A + G+ GH G E I+ G++ +TI+AFSI N++R E+
Sbjct: 1 MDGNRRFARSHGIETVEGHNLGFEALARILEVCYRSGVQVVTIYAFSIENFKRSKFEVDA 60
Query: 78 LVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFI 134
L+++ + S + + L + KVR++G L D+L + A D T+ N L I
Sbjct: 61 LMEMARVKLSQMAQHGEILDRYGAKVRILGRLDLLRPDVLAAVNRAVDMTKNNGDRVLNI 120
Query: 135 AFNYSSRDEISRAIK 149
F Y+SRDEI+ AI+
Sbjct: 121 CFPYTSRDEITGAIR 135
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 170 IAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQV-AYSEFVFIPEYWPDF 217
+A ++ T D P DL+IRT G +RLSDF+LWQ +E F+ WP+F
Sbjct: 253 LADHMLTRDNPPLDLLIRTSGVERLSDFMLWQCHENTEIAFLDILWPEF 301
>gi|289675261|ref|ZP_06496151.1| undecaprenyl pyrophosphate synthetase [Pseudomonas syringae pv.
syringae FF5]
Length = 77
Score = 77.8 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/68 (47%), Positives = 44/68 (64%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
SS P H+ IIMDGN RWA R LP AGH+ G++ ++ AE ++ LT+FAFS N
Sbjct: 10 SSVPRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAEARVEVLTLFAFSSEN 69
Query: 68 WRRPVSEI 75
W+RP + +
Sbjct: 70 WQRPAAAV 77
>gi|242769358|ref|XP_002341752.1| prenyltransferase, putative [Talaromyces stipitatus ATCC 10500]
gi|218724948|gb|EED24365.1| prenyltransferase, putative [Talaromyces stipitatus ATCC 10500]
Length = 385
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 3/157 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P HI +MDGN R+A + G+ GH G E I+ + G+K +TI
Sbjct: 31 LLGALRQGPIPQHIAFVMDGNRRFARSHGIETIEGHHLGFEALARILEVCYKSGVKVVTI 90
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N+ R E++ L+ + + L + L + +R +G + L D++ +
Sbjct: 91 YAFSIENFNRSQFEVNGLMDMANVKLAQLAQHGDILDRYGASIRFLGRKDLLRPDVVAAV 150
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD 154
A + T N L I Y+SRDEI++AI+ D
Sbjct: 151 DRAVEVTSRNGDRVLNICCPYTSRDEITQAIRQTVID 187
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 165 VDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFF 223
+ + + + T + P D++IRT G +RLSDF+LWQ +E F+ WP+F F
Sbjct: 281 ITPQTLTERMYTGNNPPIDILIRTSGVERLSDFMLWQCHEDTELAFLDVLWPEFDLWHFL 340
Query: 224 HALNQYNLR 232
L ++ R
Sbjct: 341 PVLWKWQRR 349
>gi|300708517|ref|XP_002996436.1| hypothetical protein NCER_100483 [Nosema ceranae BRL01]
gi|239605738|gb|EEQ82765.1| hypothetical protein NCER_100483 [Nosema ceranae BRL01]
Length = 281
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 101/226 (44%), Gaps = 40/226 (17%)
Query: 14 IGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVS 73
I I DGN R+ G++ EI+ + I + + FSI N++R
Sbjct: 89 IAFIADGNRRYLKKMNKDIEQVKEDGLKRIKEIIEFCNQFNIPEVGFYCFSIKNFKRSDK 148
Query: 74 EISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL--N 131
E+ +++L+ Y+ N KVRVIGN L I +++ E T+ NTG+ N
Sbjct: 149 EVQNVLQLLT-------YNPYITNYKVRVIGNLDLLPPAIGENMRKLEISTKNNTGIIVN 201
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
LFIA YS++DE+ IK +G V DLI+RT GE
Sbjct: 202 LFIA--YSTQDEVENGIK------FTGEV----------------------DLIVRTSGE 231
Query: 192 KRLSDFLLWQVAYSEFVFIPEY-WPDFSRELFFHALNQYNLRDRRF 236
KRLSDFL+ Q +F ++ WP+ + + + +Y L F
Sbjct: 232 KRLSDFLILQCCRGTNIFFCDFLWPEITLVHLYLIMLKYKLEQIFF 277
>gi|330508960|ref|YP_004385388.1| di-trans,poly-cis-decaprenylcistransferase [Methanosaeta concilii
GP-6]
gi|328929768|gb|AEB69570.1| di-trans,poly-cis-decaprenylcistransferase [Methanosaeta concilii
GP-6]
Length = 203
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ + ++ Y + E++ A +++ ++E G + D+D I L S PDL+IR G
Sbjct: 98 MRVTVSLGYGGKREVTEAFRDLLSEVEEGRLIPEDIDEKAIESRLRFSQ--KPDLVIRAG 155
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
G K+LSDF++WQ AYSE F W + F A+ Y R+RRFG
Sbjct: 156 G-KQLSDFMIWQSAYSELYFTDVNWLRLRKIDFLRAIRDYQGRERRFG 202
>gi|212542253|ref|XP_002151281.1| prenyltransferase, putative [Penicillium marneffei ATCC 18224]
gi|210066188|gb|EEA20281.1| prenyltransferase, putative [Penicillium marneffei ATCC 18224]
Length = 387
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 78/157 (49%), Gaps = 3/157 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P HI +MDGN R+A G+ GH G E I+ + G+K +TI
Sbjct: 31 LLGALRQGPIPQHIAFVMDGNRRFAKTHGIETIEGHHLGFEALARILEVCYKSGVKVVTI 90
Query: 61 FAFSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N+ R E++ L+ + + L + L + +R +G + L D++ +
Sbjct: 91 YAFSIENFNRSQFEVNGLMDMANVKLAQLAQHGDILDRYGASIRFLGRKDLLRPDVVAAV 150
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD 154
A + T N L I Y+SRDE+++AI+ D
Sbjct: 151 DRAVELTSRNGDKILNICCPYTSRDEMTQAIRQTVVD 187
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 160 VCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFS 218
+ S + S + + T P D+++RT G +RLSDF+LWQ +E F+ WP+F
Sbjct: 278 LSSESITSQTLTDRMYTGGNPPIDILVRTSGVERLSDFMLWQCHEDTEIAFLDVLWPEFD 337
Query: 219 RELFFHALNQYNLR 232
F L ++ R
Sbjct: 338 LWHFLPVLWKWQRR 351
>gi|318058215|ref|ZP_07976938.1| undecaprenyl diphosphate synthase [Streptomyces sp. SA3_actG]
Length = 110
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 48/79 (60%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A+ + P H+ +MDGNGRWA R LPR AGHR +I+ AA GI+ L+++A
Sbjct: 28 AATRTGRGPRHVACVMDGNGRWAERRSLPRTAGHRAAETTVIDIIEAARSAGIEWLSLYA 87
Query: 63 FSINNWRRPVSEISELVKL 81
FS NW RP +E+ L+ L
Sbjct: 88 FSTENWSRPSAEVGYLMDL 106
>gi|318079182|ref|ZP_07986514.1| undecaprenyl diphosphate synthase [Streptomyces sp. SA3_actF]
Length = 109
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 48/79 (60%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A+ + P H+ +MDGNGRWA R LPR AGHR +I+ AA GI+ L+++A
Sbjct: 28 AATRTGRGPRHVACVMDGNGRWAERRSLPRTAGHRAAETTVIDIIEAARSAGIEWLSLYA 87
Query: 63 FSINNWRRPVSEISELVKL 81
FS NW RP +E+ L+ L
Sbjct: 88 FSTENWSRPSAEVGYLMDL 106
>gi|242216368|ref|XP_002473992.1| predicted protein [Postia placenta Mad-698-R]
gi|220726857|gb|EED80793.1| predicted protein [Postia placenta Mad-698-R]
Length = 200
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 92/172 (53%), Gaps = 9/172 (5%)
Query: 53 VGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSL 109
+ ++ ++ +AF+I N++R E+ L+ L + L + L + +++ V+G L
Sbjct: 3 LNVRCVSAYAFAIENFKRTPEEVDALMSLAEEKLLEICQHGDLLGEYGVRLNVLGKTSLL 62
Query: 110 DDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD-IESGSVCSHDVDSS 168
+ V+ +AE+ TR N L + Y++R++I+ A+ + + I G ++
Sbjct: 63 PPRVQAVITKAEEMTRHNNRAILNLCMPYAARNDIAFAVDSTIEHAIAEG--WDREITED 120
Query: 169 LIAKYLDTSDVPDP--DLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDF 217
IA +L T+ P D+++RT G KRLSD+LLWQ + ++ F YWPDF
Sbjct: 121 DIAAHLMTAAAGSPPLDVLVRTSGVKRLSDYLLWQCSENTQLQFSSTYWPDF 172
>gi|58375626|ref|XP_307411.2| Anopheles gambiae str. PEST AGAP012908-PA [Anopheles gambiae str.
PEST]
gi|55247443|gb|EAA45968.2| AGAP012908-PA [Anopheles gambiae str. PEST]
Length = 181
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
V ++ + P P H+ IMDGN R+A + + GH G E +E + EVGI +T+
Sbjct: 43 VIRVLQAGPIPRHVAFIMDGNRRYARKANIAKAEGHSAGFEKLSETLQWCLEVGITEVTV 102
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+ L + ++ L + I +R+IGN L+ DI +
Sbjct: 103 YAFSIENFKRTQEEVDTLMNLARDKFQRLLAERDKLHERGICIRIIGNWDLLEPDIRRSI 162
Query: 118 KEAEDQTRLNTGLNLFIAF 136
EA TR N L +AF
Sbjct: 163 AEAVLLTRHNRKAILNVAF 181
>gi|255582899|ref|XP_002532221.1| undecaprenyl diphosphate synthase, putative [Ricinus communis]
gi|223528078|gb|EEF30152.1| undecaprenyl diphosphate synthase, putative [Ricinus communis]
Length = 331
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 85/181 (46%), Gaps = 8/181 (4%)
Query: 5 MMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++S P P H+ +MDGN R+A L AGH+ G I+ ++ +K +T++AF
Sbjct: 19 VLSMGPIPGHLSFLMDGNRRFAKKENLETGAGHKAGSSALITILKYCYDLRVKYVTVYAF 78
Query: 64 SINNWRRPVSEISELVKLI---KSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
SI N+ RP E+ ++ L+ L K + ++ I+V IGN LD + ++
Sbjct: 79 SIENFNRPPHEVQTVMDLMLETTEGLLKEESVVHQHGIRVHFIGNLKLLDKPLRVAAEKV 138
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAI----KNIFQDIESGSVCSHDVDSSLIAKYLDT 176
T NT L I YSS DEI A+ K + IE V +V + K D
Sbjct: 139 MRATSKNTKYVLLICVAYSSSDEIIHAVQESCKEKWNKIEHSKVSRGEVKVEVGNKNTDN 198
Query: 177 S 177
+
Sbjct: 199 A 199
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 153 QDIESGSVCSHDVDSSL-IAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIP 211
+D E + SH + + + K + + PDPD++IRT GE RLS+FLLWQ +
Sbjct: 240 RDEERAKMQSHSIIKQVDVEKPMYMAVAPDPDILIRTSGETRLSNFLLWQASNCPLYSPD 299
Query: 212 EYWPDFS-RELFFHALN 227
WP+F R L + LN
Sbjct: 300 VLWPEFGLRHLVWAVLN 316
>gi|21227185|ref|NP_633107.1| undecaprenyl pyrophosphate synthetase [Methanosarcina mazei Go1]
gi|20905523|gb|AAM30779.1| Undecaprenyl pyrophosphate synthetase [Methanosarcina mazei Go1]
Length = 224
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 114 LCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKY 173
+C L+ + +R ++++ + R EI+RA+ +I ++++G + +VD ++ +
Sbjct: 103 ICGLEGEVNCSRQGKDFFVYLSLGFGGRGEITRAVISILDEVKAGRIRPEEVDEKMLESH 162
Query: 174 LDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
L +PD++IR+GG+K LSDFL+WQ YSE F W D + + + R
Sbjct: 163 LLVKH--EPDIMIRSGGQK-LSDFLVWQSVYSELYFTDVNWKDVRKIDLLRVIRDFQKRQ 219
Query: 234 RRFG 237
RR+G
Sbjct: 220 RRYG 223
>gi|213419022|ref|ZP_03352088.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
Length = 79
Score = 75.5 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 32/56 (57%), Positives = 41/56 (73%)
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DL+IRTGGE R+S+FLLWQ+AY+E F WPDF + F AL+ + R+RRFGG
Sbjct: 16 DLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALHAFANRERRFGG 71
>gi|73668607|ref|YP_304622.1| undecaprenyl pyrophosphate synthetase [Methanosarcina barkeri str.
Fusaro]
gi|72395769|gb|AAZ70042.1| undecaprenyl pyrophosphate synthetase [Methanosarcina barkeri str.
Fusaro]
Length = 224
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 62/106 (58%), Gaps = 3/106 (2%)
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
++++ + RDEI RA+ I +++++ +V +VD +I +L + +PD++IR+GG+
Sbjct: 121 VYVSLGFGGRDEIMRAVLTILEEVKARTVRPEEVDEKMIESHLLVNH--EPDIMIRSGGQ 178
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
LSDFL+WQ YSE F W D + A+ + R RR+G
Sbjct: 179 N-LSDFLVWQSVYSELYFTDVNWKDVRKVDLLRAMRDFQKRKRRYG 223
>gi|257051279|ref|YP_003129112.1| undecaprenyl diphosphate synthase [Halorhabdus utahensis DSM 12940]
gi|256690042|gb|ACV10379.1| undecaprenyl diphosphate synthase [Halorhabdus utahensis DSM 12940]
Length = 214
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 3/104 (2%)
Query: 134 IAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKR 193
I+ + E + A+ + +++E+G + D+D S I + L DPDL+I+TG E R
Sbjct: 113 ISIGLGGKHEFATAVSALAREVEAGELDPADIDESEIERRLVFR--SDPDLVIKTGAE-R 169
Query: 194 LSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
LSDF++WQ YSE F W DF + + A+ Y R RRFG
Sbjct: 170 LSDFMIWQSVYSELYFTDVNWRDFRKRDYLRAIRDYQQRQRRFG 213
>gi|169606342|ref|XP_001796591.1| hypothetical protein SNOG_06208 [Phaeosphaeria nodorum SN15]
gi|160706970|gb|EAT86039.2| hypothetical protein SNOG_06208 [Phaeosphaeria nodorum SN15]
Length = 377
Score = 75.1 bits (183), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 89/186 (47%), Gaps = 22/186 (11%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIE----VFNEIVAA------- 49
++ S+ P H+ +MDGN R+A + GH G E V N +V+A
Sbjct: 30 LIGSLKQGPIPQHVAFVMDGNRRFARNHHIETVEGHNLGFESLARVRNGLVSALFHTNPS 89
Query: 50 -----AAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVR 101
+ G+K +T++AFSI N++R E+ L+ + K L++ L + +R
Sbjct: 90 KILEVCYKTGVKVVTVYAFSIENFKRSKHEVDALMSMAKVKLEQIAEHGALLDRYGASIR 149
Query: 102 VIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVC 161
V+G R + D+L + A T N L + F Y+SRDEI+ A + + +E+ S
Sbjct: 150 VLGQRDLMRKDVLAAVDTAVAMTAHNKKAVLNVCFPYTSRDEITTA---VMKTVETYSTP 206
Query: 162 SHDVDS 167
H++ +
Sbjct: 207 IHNLPT 212
Score = 51.6 bits (122), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 10/114 (8%)
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
K+A + T + A N S +D+ + + F D ES +C+ + +++ T+
Sbjct: 253 KDASNLTEDELSSSTSTAINPSEKDDSND--EAAFLDPES--ICAQTLTDNMM-----TA 303
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQV-AYSEFVFIPEYWPDFSRELFFHALNQYN 230
D P DL+IRT G +RLSDF+LWQ + VF+ WP+F F L ++
Sbjct: 304 DSPPLDLLIRTSGVERLSDFMLWQCHENTSIVFLKCLWPEFDLWQFLPVLVEWQ 357
>gi|294494879|ref|YP_003541372.1| undecaprenyl diphosphate synthase [Methanohalophilus mahii DSM
5219]
gi|292665878|gb|ADE35727.1| undecaprenyl diphosphate synthase [Methanohalophilus mahii DSM
5219]
Length = 228
Score = 75.1 bits (183), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 3/107 (2%)
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
++ Y + EI+ +++ I D+E G++ D+D + + +L +PDLIIR+GG
Sbjct: 124 SIIFVLGYGGKKEITSSVRTILCDVEKGNIEPEDIDENTLESHLTIEG--EPDLIIRSGG 181
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+ LSDFL+WQ YSE F W F R F + + R RR+G
Sbjct: 182 -RHLSDFLIWQSVYSELYFTDINWNRFRRIDFLRIIRDFQKRKRRYG 227
>gi|300122760|emb|CBK23324.2| unnamed protein product [Blastocystis hominis]
Length = 132
Score = 74.7 bits (182), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 7/106 (6%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGN RWA R L GHR+G EVF E + ++G++ T++AFS NW R E+ +
Sbjct: 1 MDGNRRWARTRNLEVVEGHRRGSEVFRESIKWCIDLGVQEYTVYAFSCENWNRSNKEVED 60
Query: 78 LVKLIKSFLKKGFYSLKK------NNIKVRVIGNRLSLDDDILCVL 117
L+ L ++ K S+KK N ++R IG + L LC L
Sbjct: 61 LMTLFNLYMGKVIESMKKDKDSIYNACQLRFIGRHI-LSSFFLCFL 105
>gi|282165609|ref|YP_003357994.1| di-trans-poly-cis-decaprenylcistransferase family protein
[Methanocella paludicola SANAE]
gi|282157923|dbj|BAI63011.1| di-trans-poly-cis-decaprenylcistransferase family protein
[Methanocella paludicola SANAE]
Length = 213
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 94/218 (43%), Gaps = 39/218 (17%)
Query: 30 LPRCAG---------HRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVK 80
+PRC R + +++ AE+G+ +I+ S+ + S +S LV+
Sbjct: 24 VPRCIALVISDGDLIDRPALNKLLQLIEWCAELGVHEASIYV-SVTD----TSAVSRLVE 78
Query: 81 LIKS-FLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYS 139
I+ F GF K+ G ++ D+ C + ++ Y
Sbjct: 79 CIRDVFDGAGFPG------KIVSPGGIADIEGDMPCTVS---------------VSIGYG 117
Query: 140 SRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLL 199
+ E+ A++ +D++ G + +D I L +PDL IRTG E+RL+DFL+
Sbjct: 118 GKHELINALRAAMKDVKEGRLSEDSIDEQAIDSRLVFK--CEPDLFIRTG-EERLTDFLI 174
Query: 200 WQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
WQ YSE F W DF + A+ Y R RR+G
Sbjct: 175 WQAVYSELYFTDVNWEDFRKIDLLRAIRDYQYRQRRYG 212
>gi|154151604|ref|YP_001405222.1| di-trans-poly-cis-decaprenylcistransferase [Candidatus
Methanoregula boonei 6A8]
gi|154000156|gb|ABS56579.1| Di-trans-poly-cis-decaprenylcistransferase [Methanoregula boonei
6A8]
Length = 213
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 63/122 (51%), Gaps = 9/122 (7%)
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD-IESGSVCSHDVDSSLIAKYLD 175
L + L TGL + +A S R+EI+ I+ + Q+ ++ + ++S L +Y
Sbjct: 99 LHHGTTEEVLGTGLGVVVAIGKSGREEITDCIRRLAQEGVQPTEIDEKMLESCLTFRY-- 156
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
DPD++++TGG+ L+DFL+WQ YSE F W F R F L Y R RR
Sbjct: 157 -----DPDIVVKTGGDH-LTDFLIWQSVYSELFFSDVNWKYFRRVDFLRVLRDYQARIRR 210
Query: 236 FG 237
FG
Sbjct: 211 FG 212
>gi|289670226|ref|ZP_06491301.1| undecaprenyl pyrophosphate synthase [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 108
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 50/89 (56%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA R PR GHR G N + E G+ LT+FAFS NW RP E+
Sbjct: 1 MDGNGRWAQRRRRPRVIGHRAGARAVNRTIDFCLEKGVSALTLFAFSSENWGRPQDEVDA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNR 106
L+KL L + L++ ++VR IG+R
Sbjct: 61 LMKLFLHALDREVEELQRRGVQVRFIGDR 89
>gi|168188135|ref|ZP_02622770.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum
C str. Eklund]
gi|169294031|gb|EDS76164.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum
C str. Eklund]
Length = 81
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 38/54 (70%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
P+HI IIMDGNGRWA R LPR GH+ G+E EIV +++ +K LT++AF
Sbjct: 23 PEHIAIIMDGNGRWAKKRKLPRTVGHKAGVETIREIVKECSKLNVKILTLYAFQ 76
>gi|291446618|ref|ZP_06586008.1| undecaprenyl pyrophosphate synthetase 1 [Streptomyces roseosporus
NRRL 15998]
gi|291349565|gb|EFE76469.1| undecaprenyl pyrophosphate synthetase 1 [Streptomyces roseosporus
NRRL 15998]
Length = 235
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 101/235 (42%), Gaps = 11/235 (4%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIV--AAAAEVGIKNLTIFAFSINNW 68
P H+ +++DG ++A +G+ +R G EI A G L I + +
Sbjct: 3 PRHVAVLLDGLAQFAEEQGVSEAMAYRAGCAKQLEIARWCHARGAGTVTLEILPPTHTDP 62
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGN--RLSLDDDILCVLKEAEDQTRL 126
++ +E ++ FL G+ + +I + +G+ RL + A
Sbjct: 63 HEDIAADAEWAAVLDDFLV-GWDGAR--DIALNHLGDPARLPVKLADRFRASAARRDAAT 119
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS----DVPDP 182
+ +A Y EI A++ ++ DV ++L + L+T +P
Sbjct: 120 QGSFQVNLALGYDGHGEILDAVRATLHQAQADGRGLTDVAAALDVESLETQLASGPLPPV 179
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DLIIR GG + LS FLLWQ AY+EF F P +++ A Y R+RR+G
Sbjct: 180 DLIIRAGGGQYLSGFLLWQSAYAEFYFSGTPAPALTQDDLTAAFADYARRNRRYG 234
>gi|52549200|gb|AAU83049.1| undecaprenyl diphosphate synthase [uncultured archaeon GZfos26D6]
Length = 234
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Query: 134 IAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKR 193
I+ + R E+++ IK I +E G + ++D L+ L +PDL+IR+G R
Sbjct: 133 ISIGFGGRSELTKGIKEIVARVERGELEPEEIDEKLLESQLIFK--SEPDLVIRSGA-TR 189
Query: 194 LSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
L+DFL+WQ YSEF F W F + + A+ + R+RR+G
Sbjct: 190 LADFLIWQSVYSEFYFTDVNWLKFRKIDLYRAVRDFQWRERRYG 233
>gi|300122759|emb|CBK23323.2| unnamed protein product [Blastocystis hominis]
Length = 97
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 170 IAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQY 229
+A L T + P D++IRTGGE R+S+FLLWQ+AY+E + E+WPDF+ E AL
Sbjct: 30 VADNLSTGNSP-VDVMIRTGGEYRISNFLLWQLAYAELYIVDEFWPDFTFEKLKEALKSV 88
Query: 230 NLRDRRFG 237
+ R RRFG
Sbjct: 89 SKRSRRFG 96
>gi|317471592|ref|ZP_07930936.1| di-trans,poly-cis-decaprenylcistransferase [Anaerostipes sp.
3_2_56FAA]
gi|316900907|gb|EFV22877.1| di-trans,poly-cis-decaprenylcistransferase [Anaerostipes sp.
3_2_56FAA]
Length = 55
Score = 72.4 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 30/55 (54%), Positives = 42/55 (76%)
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE+RLS+F+LWQ+AY+EF F WPDF+++ A+ YN R+RRFGG+
Sbjct: 1 MIRTSGEQRLSNFMLWQLAYTEFYFTDVLWPDFNKKELKKAVEYYNGRERRFGGI 55
>gi|110669209|ref|YP_659020.1| di-trans,poly-cis-decaprenylcistransferase [Haloquadratum walsbyi
DSM 16790]
gi|109626956|emb|CAJ53428.1| di-trans,poly-cis-decaprenylcistransferase [Haloquadratum walsbyi
DSM 16790]
Length = 202
Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 143 EISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQV 202
E + A++ I + ++ GS+ VD+ I L D +PDL+I+TG E RLSDFL+WQ
Sbjct: 110 EFAAAVRQIAEAVDEGSIDPDTVDADTIEDRLVFDD--EPDLVIKTGAE-RLSDFLIWQS 166
Query: 203 AYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
YSE F W DF R + A+ Y R RRFG
Sbjct: 167 VYSELYFTDVNWRDFRRRDYVRAVIDYQNRQRRFG 201
>gi|290890489|ref|ZP_06553564.1| hypothetical protein AWRIB429_0954 [Oenococcus oeni AWRIB429]
gi|290479885|gb|EFD88534.1| hypothetical protein AWRIB429_0954 [Oenococcus oeni AWRIB429]
Length = 90
Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 40/61 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA + R GH+ G++ I AA +G+K LT+FAFS NW R
Sbjct: 20 PEHVAIIMDGNGRWAKRQHKSRIFGHKAGMQNVKTIALAANNLGVKVLTLFAFSTENWGR 79
Query: 71 P 71
P
Sbjct: 80 P 80
>gi|284166510|ref|YP_003404789.1| undecaprenyl diphosphate synthase [Haloterrigena turkmenica DSM
5511]
gi|284016165|gb|ADB62116.1| undecaprenyl diphosphate synthase [Haloterrigena turkmenica DSM
5511]
Length = 210
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Query: 134 IAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKR 193
I + E + A++ + + ++ G + ++D + +L +PDL+I+TG E R
Sbjct: 109 IGIGLGGKHEFTSAVRTLAEHVDDGQLAPEEIDDERVENHLVFPS--EPDLVIKTGAE-R 165
Query: 194 LSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
LSDF++WQ YSE F W DF + F A+ +Y R RRFG
Sbjct: 166 LSDFMIWQSVYSELYFTDVNWRDFRKRDFLRAVREYCNRSRRFG 209
>gi|20387101|dbj|BAB91251.1| cis-prenyltransferase [Hevea brasiliensis]
Length = 207
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 30/205 (14%)
Query: 17 IMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEIS 76
IMDGN R+A + G++ G + E+G++ +TI+AFSI+N+RR E+
Sbjct: 3 IMDGNRRFAKKHKMKEAEGYKAGYLALLRTLTYCYELGVRYVTIYAFSIDNFRRQPREVQ 62
Query: 77 ELVKLIKSFLKKGFYSLKKNN---IKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLF 133
++ L+ +++ N + VR++GN LD+ I ++ T N+ L
Sbjct: 63 CVMNLMMEKIEEIIVEESIMNAYDVGVRIVGNLNLLDEPIRIAAEKIMRATANNSRFVLL 122
Query: 134 IAFNYSSRDEISRAIKNIFQD-IESGSVCSHDVDSSLIAKY------------------- 173
IA YSS DEI A++ +D + S VC++ +++ K
Sbjct: 123 IAVAYSSTDEIVHAVEESSKDKLNSNEVCNNGIEAEQEFKEANGTGNSVIPVQKTESYSG 182
Query: 174 LDTSDV-------PDPDLIIRTGGE 191
++ +D+ P PD++I T GE
Sbjct: 183 INLADLEKNTYVNPHPDVLISTSGE 207
>gi|292656446|ref|YP_003536343.1| Undecaprenyl pyrophosphate synthetase [Haloferax volcanii DS2]
gi|291371120|gb|ADE03347.1| Undecaprenyl pyrophosphate synthetase [Haloferax volcanii DS2]
Length = 202
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 66/121 (54%), Gaps = 5/121 (4%)
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT 176
L+E D R + + + I + E + ++++ +++ G++ D+D++ I + L
Sbjct: 86 LREPGDTERADAPVQVSIGLG--GKREFASVVRSLAGEVDEGALEPDDIDAADIEQRLVF 143
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
D +PD +++TG E RLSDF++WQ Y+E F W DF + + AL Y R RRF
Sbjct: 144 PD--EPDFVVKTGAE-RLSDFMIWQSVYAELYFTDVNWRDFRKRDYLRALRDYQDRQRRF 200
Query: 237 G 237
G
Sbjct: 201 G 201
>gi|88602079|ref|YP_502257.1| di-trans-poly-cis-decaprenylcistransferase [Methanospirillum
hungatei JF-1]
gi|88187541|gb|ABD40538.1| Di-trans-poly-cis-decaprenylcistransferase [Methanospirillum
hungatei JF-1]
Length = 208
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 58/111 (52%), Gaps = 7/111 (6%)
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
TG+++ IA S R+EIS AI Q + +V DV + ++ KYL S PD +I+
Sbjct: 105 TGISVTIAIGKSGREEISDAI----QSMADNNVAPEDVTTDVLEKYLTFSHTPD--CVIK 158
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
TGG L DFL+WQ YSE F+ W + A Y R+RRFG
Sbjct: 159 TGG-AHLVDFLIWQSVYSELFFLDLNWEKIRKIDLIRAFRDYQSRNRRFGA 208
>gi|307352896|ref|YP_003893947.1| Di-trans-poly-cis-decaprenylcistransferase [Methanoplanus
petrolearius DSM 11571]
gi|307156129|gb|ADN35509.1| Di-trans-poly-cis-decaprenylcistransferase [Methanoplanus
petrolearius DSM 11571]
Length = 219
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 59/109 (54%), Gaps = 7/109 (6%)
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
G ++ +A S R+EI R I+++ Q+ + DVD +I +L S +PDL+I+
Sbjct: 117 GADVHVAIGVSGREEIVRCIRHMAQE----KLHPKDVDEEMIESHL--SFRYEPDLVIKA 170
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
GG L+DFL+WQ YSE F W +F + AL Y R RR+G
Sbjct: 171 GG-SHLTDFLIWQSVYSELFFTDVNWSEFRKIDLLRALRDYQTRKRRYG 218
>gi|257387596|ref|YP_003177369.1| undecaprenyl diphosphate synthase [Halomicrobium mukohataei DSM
12286]
gi|257169903|gb|ACV47662.1| undecaprenyl diphosphate synthase [Halomicrobium mukohataei DSM
12286]
Length = 202
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Query: 134 IAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKR 193
++ + E + A+++I Q + G + ++D S++ + L PD L+++TG E R
Sbjct: 101 VSIGLGGKHEFAIAVRSIAQSVADGDLAPDEIDESVVEEQLVFPTAPD--LVVKTGAE-R 157
Query: 194 LSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
LSDF++WQ YSE F W +F + AL Y R RRFG
Sbjct: 158 LSDFMIWQSVYSELYFTDVNWQNFGERDYLRALRDYQDRQRRFG 201
>gi|268323338|emb|CBH36926.1| putative undecaprenyl pyrophosphate synthetase [uncultured
archaeon]
Length = 234
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Query: 134 IAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKR 193
I+ + R E+++ IK I ++ G + ++D L+ L +PDL+IR+G R
Sbjct: 133 ISIGFGGRSELTKGIKEIVARVKIGELEPEEIDEKLLESQLIFK--SEPDLVIRSGA-TR 189
Query: 194 LSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
L+DFL+WQ YSEF F W F + + A+ + R+RR+G
Sbjct: 190 LADFLIWQSVYSEFYFTDVNWLKFRKIDLYRAVRDFRWRERRYG 233
>gi|313125505|ref|YP_004035769.1| undecaprenyl diphosphate synthase [Halogeometricum borinquense DSM
11551]
gi|312291870|gb|ADQ66330.1| undecaprenyl diphosphate synthase [Halogeometricum borinquense DSM
11551]
Length = 202
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 134 IAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKR 193
++ + E + +++I +D+++G + D+ + + + L D +PDL+I+TG E R
Sbjct: 101 VSIGLGGKREFADVVRDIAEDVDAGDLSPEDIGAEHVEERLVFQD--EPDLLIKTGAE-R 157
Query: 194 LSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
LSDF++WQ YSE F W DF + + A+ + R RRFG
Sbjct: 158 LSDFMIWQSVYSELYFTDVNWRDFRKRDYLRAVLDFQNRQRRFG 201
>gi|206994195|emb|CAR79339.1| dehydrodolichyl diphosphate synthase [Oncorhynchus mykiss]
Length = 154
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 45/71 (63%)
Query: 164 DVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFF 223
DV +L+ L +S+ P+PDL+IRT GE RLSDFLLWQ ++S VF WP++S
Sbjct: 1 DVSEALLGHCLYSSNSPNPDLLIRTSGEVRLSDFLLWQTSHSCLVFQSVLWPEYSFWNLC 60
Query: 224 HALNQYNLRDR 234
A+ QY L R
Sbjct: 61 DAILQYQLNHR 71
>gi|70939189|ref|XP_740170.1| dehydrodolichyl diphosphate synthetase [Plasmodium chabaudi
chabaudi]
gi|56517698|emb|CAH76718.1| dehydrodolichyl diphosphate synthetase, putative [Plasmodium
chabaudi chabaudi]
Length = 163
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 158 GSVCSHDVDSSLIAKY---LDTSDVPDPDLIIRTGGEKRLSDFLLWQVA-YSEFVFIPEY 213
G VCS D + I Y L T+D P PD++IRT GE+RLSDF+L+QV+ ++E FI +Y
Sbjct: 70 GKVCSFDKNQIKILNYHNKLLTADFPPPDILIRTSGEQRLSDFMLYQVSEFTEVYFIDDY 129
Query: 214 WPDFSRELFFHALNQYNL 231
WP F+ F + + Y +
Sbjct: 130 WPIFNFLKFIYVILHYTI 147
>gi|120402706|ref|YP_952535.1| di-trans-poly-cis-decaprenylcistransferase [Mycobacterium
vanbaalenii PYR-1]
gi|119955524|gb|ABM12529.1| Di-trans-poly-cis-decaprenylcistransferase [Mycobacterium
vanbaalenii PYR-1]
Length = 215
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 90/204 (44%), Gaps = 23/204 (11%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+G+I DG RWA A +R+G E E++ A ++ +T++ S N R
Sbjct: 3 PAHVGLIPDGLRRWARANDTTLTDAYRRGAETVVELLLALQRNQVQTVTVYNLSRANLAR 62
Query: 71 PVSEISELVKLIKSFLKKGFYS-LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
P E+ + FL + + VRV G+R L D ++ E T + G
Sbjct: 63 PSDELDAVYAASTYFLSTLIPARFDPADCGVRVHGDRSLLPDAFAAAARDIE--TAMTGG 120
Query: 130 ---LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
+N+ A Y + DE+ A + +D D D + D ++ + DL+I
Sbjct: 121 GFRINMLAA--YDAADELRAAHQRALRD---------DCDIN------DAFEIGEVDLVI 163
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFI 210
RT E LS FL Q Y++ +F+
Sbjct: 164 RTTAEPLLSGFLPMQSQYAQLLFL 187
>gi|298675729|ref|YP_003727479.1| Di-trans-poly-cis-decaprenylcistransferase [Methanohalobium
evestigatum Z-7303]
gi|298288717|gb|ADI74683.1| Di-trans-poly-cis-decaprenylcistransferase [Methanohalobium
evestigatum Z-7303]
Length = 221
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 3/110 (2%)
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+ +++++ + + EI+ A++++ D+ S + D+D + I L +PD+IIR
Sbjct: 114 SSMHVYLFLGFGGKSEITNAVRSVLSDVSSQKIDPEDIDENEIESRLLVKH--EPDMIIR 171
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
GG K LSDFL+WQ YSE F W + A+ + R R+FG
Sbjct: 172 AGG-KNLSDFLIWQSVYSELYFTDVNWDKVRKIDMIRAIRDFQKRQRKFG 220
>gi|156097733|ref|XP_001614899.1| dehydrodolichyl diphosphate synthetase [Plasmodium vivax SaI-1]
gi|148803773|gb|EDL45172.1| dehydrodolichyl diphosphate synthetase, putative [Plasmodium vivax]
Length = 289
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 112/274 (40%), Gaps = 62/274 (22%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEIS- 76
MDGN R+A +G+ GH G + +I+ + +K L++F+ S+ N+ R EI
Sbjct: 1 MDGNRRFAKEKGVHSSVGHYLGSKTLIQILEICVRLNVKVLSVFSLSLLNYNRSPEEIHF 60
Query: 77 ----ELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
L+ LI F + N I+V+V+GN + + ++++ E +T L L
Sbjct: 61 LFFLNLIILINEEFFMNF--IMDNKIRVKVLGNLSYISEAYRKIIQDIEQKTEQFDNLLL 118
Query: 133 FIAFNYSSRDEISRAI----------------KNIFQDIESGSVCSHDVDSSLIAKYLDT 176
I F+Y+SR+E+S KNI S ++ D + +
Sbjct: 119 NIFFSYTSRNEMSLCKFDPNLYFNTYKSLLEEKNILCAPSSTLTEQNEPDKCDYLESILK 178
Query: 177 SDVPDPDLIIRT----GGEKRLS----------------------------------DFL 198
S+ DP+ + GG L+ DF+
Sbjct: 179 SERNDPNKLFEVECICGGRSFLNRGQIKIVNYHKKLLTCDLPPPNILIRTSGEKRLSDFM 238
Query: 199 LWQVA-YSEFVFIPEYWPDFSRELFFHALNQYNL 231
L+Q++ ++E FI EYWP FS F + + Y +
Sbjct: 239 LYQISEFTEIYFINEYWPIFSFLQFIYVILHYTI 272
>gi|300710600|ref|YP_003736414.1| hypothetical protein HacjB3_06155 [Halalkalicoccus jeotgali B3]
gi|299124283|gb|ADJ14622.1| hypothetical protein HacjB3_06155 [Halalkalicoccus jeotgali B3]
Length = 202
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 17/127 (13%)
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGS-----VCSHDVDSSLIA 171
++ +D R++ +++ I + E +RA++ + ++E G + D++S L+
Sbjct: 86 VRGPDDTRRVDAPISVGIGLG--GKREFTRAVRGLAHEVERGERDPDGIRDADIESQLV- 142
Query: 172 KYLDTSDVPD-PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
PD PDL+I+TG E RLSDF++WQ Y+E F W DF + + A+ Y
Sbjct: 143 -------FPDEPDLLIKTGAE-RLSDFMIWQSVYAELYFTDVNWRDFRKRDYLRAVLDYK 194
Query: 231 LRDRRFG 237
R RRFG
Sbjct: 195 KRSRRFG 201
>gi|76802905|ref|YP_331000.1| di-trans,poly-cis-decaprenylcistransferase 2; (Z)-prenyl
diphosphate synthase 2 [Natronomonas pharaonis DSM 2160]
gi|76558770|emb|CAI50363.1| di-trans,poly-cis-decaprenylcistransferase 2; (Z)-prenyl
diphosphate synthase 2 [Natronomonas pharaonis DSM 2160]
Length = 202
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 134 IAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKR 193
++ R+E + A++ I +D +G++ D+D S I + L + PDL+I+TG E R
Sbjct: 101 VSIGLGGREEFAAAVRQIAEDAAAGALAPDDIDESEIERRLVFRN--QPDLVIKTGAE-R 157
Query: 194 LSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
LSDFL+WQ YSE F W F R F A+ ++ R RRFG
Sbjct: 158 LSDFLIWQSVYSELYFTDVNWRAFRRRDFLRAVREFQERQRRFG 201
>gi|239943142|ref|ZP_04695079.1| short-chain Z-isoprenyl diphosphate synthase [Streptomyces
roseosporus NRRL 15998]
gi|239989600|ref|ZP_04710264.1| short-chain Z-isoprenyl diphosphate synthase [Streptomyces
roseosporus NRRL 11379]
Length = 230
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 99/232 (42%), Gaps = 11/232 (4%)
Query: 14 IGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIV--AAAAEVGIKNLTIFAFSINNWRRP 71
+ +++DG ++A +G+ +R G EI A G L I + +
Sbjct: 1 MAVLLDGLAQFAEEQGVSEAMAYRAGCAKQLEIARWCHARGAGTVTLEILPPTHTDPHED 60
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGN--RLSLDDDILCVLKEAEDQTRLNTG 129
++ +E ++ FL G+ + +I + +G+ RL + A
Sbjct: 61 IAADAEWAAVLDDFLV-GWDGAR--DIALNHLGDPARLPVKLADRFRASAARRDAATQGS 117
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT----SDVPDPDLI 185
+ +A Y EI A++ ++ DV ++L + L+T +P DLI
Sbjct: 118 FQVNLALGYDGHGEILDAVRATLHQAQADGRGLTDVAAALDVESLETQLASGPLPPVDLI 177
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IR GG + LS FLLWQ AY+EF F P +++ A Y R+RR+G
Sbjct: 178 IRAGGGQYLSGFLLWQSAYAEFYFSGTPAPALTQDDLTAAFADYARRNRRYG 229
>gi|126179730|ref|YP_001047695.1| di-trans-poly-cis-decaprenylcistransferase [Methanoculleus
marisnigri JR1]
gi|125862524|gb|ABN57713.1| Di-trans-poly-cis-decaprenylcistransferase [Methanoculleus
marisnigri JR1]
Length = 196
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 60/109 (55%), Gaps = 7/109 (6%)
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
G+++ +A S R+EI+ ++ + +D V VD L+ YL + +PDL+I+T
Sbjct: 94 GMDVTVAIGKSGREEIAGCVRRMAED----GVDPELVDEDLLESYLTFN--YEPDLVIKT 147
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
GG+ L+DFL+WQ YSE F+ W + F AL + R RRFG
Sbjct: 148 GGDH-LTDFLIWQSVYSELFFLDVNWALLRKVDFLRALRDFQSRARRFG 195
>gi|241574064|ref|XP_002403240.1| undecaprenyl pyrophosphate synthetase, putative [Ixodes scapularis]
gi|215500203|gb|EEC09697.1| undecaprenyl pyrophosphate synthetase, putative [Ixodes scapularis]
Length = 99
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 56/99 (56%)
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+F A +YSS+ ++SR + ++ G + D+ +SLI +Y++ D P D +RT GE
Sbjct: 1 IFYAASYSSQHQMSRMALTLCHAVKEGLLEPRDITASLIDRYIEIEDGPMIDCYLRTSGE 60
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
+RLSDF+ WQ + F+ + +PDF F + Y+
Sbjct: 61 RRLSDFMTWQSERAAIYFLTKNFPDFVLLDMFKMMLHYS 99
>gi|323307742|gb|EGA61005.1| Srt1p [Saccharomyces cerevisiae FostersO]
Length = 220
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 78/150 (52%), Gaps = 6/150 (4%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IMDGN R+A +R LP GH G ++ +G+K ++ +AFSI N+ R
Sbjct: 67 PEHVSFIMDGNRRYAKSRRLPVKKGHEAGGLTLLTLLYICKRLGVKCVSAYAFSIENFNR 126
Query: 71 PVSEISELVKL----IKSFLKKGF-YSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
P E+ L+ L + F K+ Y K+R++G++ L ++ + ++
Sbjct: 127 PKEEVDTLMNLFTVKLDEFAKRAKDYKDPLYGSKIRIVGDQSLLSPEMKKKKLKRWKKSH 186
Query: 126 LNTGLNLFI-AFNYSSRDEISRAIKNIFQD 154
++L++ F Y+SR+++ I++ +D
Sbjct: 187 RMETISLYLYCFPYTSRNDMLHTIRDSVED 216
>gi|289580904|ref|YP_003479370.1| undecaprenyl diphosphate synthase [Natrialba magadii ATCC 43099]
gi|289530457|gb|ADD04808.1| undecaprenyl diphosphate synthase [Natrialba magadii ATCC 43099]
Length = 201
Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 58/104 (55%), Gaps = 3/104 (2%)
Query: 134 IAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKR 193
I + E + A++ + + +E+G++ D+D + +L +PDL+I+TG E R
Sbjct: 100 IGIGLGGKHEFTSAVRTLAEGVEAGALEPDDIDDDRVEDHLVFPS--EPDLVIKTGAE-R 156
Query: 194 LSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
LSDF++WQ YSE F W DF + F A+ +Y R RRFG
Sbjct: 157 LSDFMIWQSVYSELYFTDVNWRDFRKRDFLRAVREYCNRSRRFG 200
>gi|15790699|ref|NP_280523.1| hypothetical protein VNG1781C [Halobacterium sp. NRC-1]
gi|10581235|gb|AAG20003.1| conserved hypothetical protein [Halobacterium sp. NRC-1]
Length = 326
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Query: 134 IAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKR 193
++ + + E + A++++ + +G + +D +I L +PDL+I+TG E R
Sbjct: 225 VSVGHGGKHEFATAVRSVADAVAAGDLDPDAIDEDVIESELVFP--AEPDLVIKTGAE-R 281
Query: 194 LSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
LSDF++WQ YSE F W DF + + A+ Y R RRFG
Sbjct: 282 LSDFMIWQSVYSELYFTDVNWRDFRKRDYLRAVLDYQNRQRRFG 325
>gi|169236440|ref|YP_001689640.1| di-trans,poly-cis-decaprenylcistransferase / (Z)-prenyl diphosphate
synthase [Halobacterium salinarum R1]
gi|167727506|emb|CAP14294.1| di-trans,poly-cis-decaprenylcistransferase / (Z)-prenyl diphosphate
synthase [Halobacterium salinarum R1]
Length = 202
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 115 CVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYL 174
++ +D R + + ++ + + E + A++++ + +G + +D +I L
Sbjct: 84 VAVRGPDDDERADAPIQ--VSVGHGGKHEFATAVRSVADAVAAGDLDPDAIDEDVIESEL 141
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
+PDL+I+TG E RLSDF++WQ YSE F W DF + + A+ Y R R
Sbjct: 142 VFP--AEPDLVIKTGAE-RLSDFMIWQSVYSELYFTDVNWRDFRKRDYLRAVLDYQNRQR 198
Query: 235 RFG 237
RFG
Sbjct: 199 RFG 201
>gi|169806090|ref|XP_001827790.1| dehydrodolichyl diphosphate synthetase [Enterocytozoon bieneusi
H348]
gi|161779076|gb|EDQ31102.1| dehydrodolichyl diphosphate synthetase [Enterocytozoon bieneusi
H348]
Length = 282
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 38/211 (18%)
Query: 14 IGIIMDGNGRWAAARGLPRCAGH-RKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
I I DGN RWA + + GIE +I+ + G+++++ + FSI N++R
Sbjct: 80 IVFICDGNRRWATKNNIDNNQTKIQYGIEKIEQIIEFSYLHGLRSVSFYIFSIRNFQRDS 139
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDD----DILCVLKEAEDQTRLNT 128
+EI IK F+ G ++ ++++ G+ +D + L ++E D +
Sbjct: 140 AEIMA----IKKFITNG--KIQNYPFQLKLYGDFSYFEDATIIEKLLEIEEKSDSRNNSF 193
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+N+FI++N ++ D+ + F D + DL+IRT
Sbjct: 194 IVNIFISYNSTNCDKDKTNKRQFFND--------------------------NVDLVIRT 227
Query: 189 GGEKRLSDFLLWQVAYSEFV-FIPEYWPDFS 218
GEKRLSDF++ QVA V F+ WP+ +
Sbjct: 228 SGEKRLSDFMIRQVASGCGVNFVNCLWPELT 258
>gi|284161380|ref|YP_003400003.1| Di-trans-poly-cis-decaprenylcistransferase [Archaeoglobus profundus
DSM 5631]
gi|284011377|gb|ADB57330.1| Di-trans-poly-cis-decaprenylcistransferase [Archaeoglobus profundus
DSM 5631]
Length = 181
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 7/134 (5%)
Query: 105 NRLSLDDDILCVLK-EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSH 163
+ +++ +CV + E + +T L G+ + YS +DEI A++ + + ++ G + +
Sbjct: 53 KKFGVEELTVCVRRGEKKVETSLLNGVKVNYVIGYSGKDEIVDAVRELARLVDKGVLKAE 112
Query: 164 DVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFF 223
DVD ++ ++L PDLII G E + +FL+WQ YSE F F F
Sbjct: 113 DVDEKVVERFLKIR--SSPDLIINVGDE--IPEFLIWQSIYSELYFAD--ISQFRYVDFL 166
Query: 224 HALNQYNLRDRRFG 237
L Y R+RR+G
Sbjct: 167 RCLRDYQRRERRYG 180
>gi|219850795|ref|YP_002465227.1| Di-trans-poly-cis-decaprenylcistransferase [Methanosphaerula
palustris E1-9c]
gi|219545054|gb|ACL15504.1| Di-trans-poly-cis-decaprenylcistransferase [Methanosphaerula
palustris E1-9c]
Length = 196
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 61/118 (51%), Gaps = 9/118 (7%)
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E+Q+ G+ + +A S R+EI+ I+ + ++ + VD S+ +YL P
Sbjct: 88 EEQS--GKGIAVTVAVGKSGREEITACIRAMAEE----HIAPEAVDESVFERYLTFHYTP 141
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
D L+I+TGG+ L+DFL+WQ YSE F W + F AL Y R RRFG
Sbjct: 142 D--LMIKTGGD-HLTDFLIWQSVYSELFFSDVNWKFLRKVDFLRALRDYQSRVRRFGA 196
>gi|218682880|ref|ZP_03530481.1| undecaprenyl pyrophosphate synthase protein [Rhizobium etli CIAT
894]
Length = 48
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/43 (62%), Positives = 33/43 (76%)
Query: 201 QVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
Q AYSE +F+PEYWPDFS E+F AL ++ RDRRFGGLS +
Sbjct: 1 QAAYSEPIFLPEYWPDFSPEIFRQALEKFASRDRRFGGLSSQA 43
>gi|302819584|ref|XP_002991462.1| hypothetical protein SELMODRAFT_429770 [Selaginella moellendorffii]
gi|300140855|gb|EFJ07574.1| hypothetical protein SELMODRAFT_429770 [Selaginella moellendorffii]
Length = 160
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 70/122 (57%), Gaps = 5/122 (4%)
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT 176
+ EA + T+ + L +A Y +++ +A + ++E G V ++D++ + K +
Sbjct: 40 ISEAHEMTQDSKDLKFILAITYGGWEDVLQACRRA-SEVEQGVVKANDINQCYLWKKMLL 98
Query: 177 SD----VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLR 232
++ V DPDL+I T E+RLS++L+ ++Y+E VF + PDF+ E + AL ++ R
Sbjct: 99 TELDGEVSDPDLLICTSREQRLSNYLVNNLSYTELVFTKKLQPDFNEEDYVKALVEFQER 158
Query: 233 DR 234
+R
Sbjct: 159 NR 160
>gi|20387099|dbj|BAB91250.1| cis-prenyltransferase [Hevea brasiliensis]
Length = 198
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 23/199 (11%)
Query: 15 GIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSE 74
IMDGN R+A + G+R ++ E+G+K TI+AF +N++ E
Sbjct: 1 AFIMDGNRRYAKKWNIAEATGYRAVFLAVMCMLKYCYELGVKYTTIYAFGYDNFKIRPEE 60
Query: 75 ISELVKL----IKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
+ L+ L I+ +K+ + + ++V +G+ L++ + ++A T +T
Sbjct: 61 VQYLMDLMLEKIEGLIKQESI-VNEYGVRVHFVGDLKLLNERVRVAAEKAMQATVNSTNS 119
Query: 131 NLFIAFNYSSRDEISRAIK-------NIFQDI-----ESGSVCSHDVDSSLIAKYLDTSD 178
L I Y+S DEI A++ N Q++ ++G + + I K +D
Sbjct: 120 TLLICVAYTSTDEILHAVQSSCLEKWNEIQELDANQAQNGEITEEKQELKHIIKLVDIER 179
Query: 179 ------VPDPDLIIRTGGE 191
PDPD++IRT GE
Sbjct: 180 HTYMGLAPDPDVLIRTSGE 198
>gi|124484953|ref|YP_001029569.1| ATP-dependent carboligase [Methanocorpusculum labreanum Z]
gi|124362494|gb|ABN06302.1| Di-trans-poly-cis-decaprenylcistransferase [Methanocorpusculum
labreanum Z]
Length = 197
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 62/118 (52%), Gaps = 8/118 (6%)
Query: 121 EDQTRLNTGL-NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV 179
E T + TG+ + IA + R+EI+ AI I ++ V +++ +I K+L
Sbjct: 86 EHDTIIGTGIPEILIALGKTGREEITDAIIKIAKE----GVEPNEITEDMIEKHLIFH-- 139
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+PD +I+TGG L+DFL+WQ YSE F W F + + AL Y R RR+G
Sbjct: 140 VNPDFVIKTGG-NHLTDFLIWQSVYSELFFTDINWGGFRKVDYLRALRDYQSRGRRYG 196
>gi|167948136|ref|ZP_02535210.1| Undecaprenyl pyrophosphate synthetase family protein [Endoriftia
persephone 'Hot96_1+Hot96_2']
Length = 89
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 31/40 (77%)
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDF 217
D+PDPDL IRTGGE R+S+FLLWQ AYSE F WP+F
Sbjct: 5 DLPDPDLFIRTGGECRVSNFLLWQAAYSELYFTDLLWPEF 44
>gi|56752989|gb|AAW24706.1| unknown [Schistosoma japonicum]
Length = 172
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y+SR++I+ A++ + ++ G + D+ ++K L T DL+IRT GE RLSDF
Sbjct: 3 YNSRNDITNAMETVRLGVKEGKIIPSDITREPLSKCLYTRLSKPLDLLIRTSGEIRLSDF 62
Query: 198 LLWQVAY--SEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
L WQ + + + FI YWP+FS F ++ Y + + L
Sbjct: 63 LTWQASENGTIYKFIGNYWPEFSWWDFLSSIFHYQMSYLQLSTL 106
>gi|117662873|gb|ABK55727.1| dehydrodolichyl diphosphate synthase [Cucumis sativus]
Length = 117
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 58/116 (50%)
Query: 24 WAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIK 83
W A + GH G+ E+V E I L++FAFS +NW R E+ L+ L +
Sbjct: 1 WELAMNMADSKGHDAGVRSLREMVDLCLEWDIPVLSVFAFSYDNWLRSKREVEFLMFLFE 60
Query: 84 SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYS 139
LK + I++ VIG+ L + ++ EA ++T+ NT L L +A +YS
Sbjct: 61 RVLKSEMEKSSRKGIRLSVIGDLSLLPKSLQNLINEAVERTKSNTKLQLIVAASYS 116
>gi|222480070|ref|YP_002566307.1| Di-trans-poly-cis-decaprenylcistransferase [Halorubrum
lacusprofundi ATCC 49239]
gi|222452972|gb|ACM57237.1| Di-trans-poly-cis-decaprenylcistransferase [Halorubrum
lacusprofundi ATCC 49239]
Length = 286
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Query: 134 IAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKR 193
I + E + A++ + D+++G + +D + ++ L + +PDL+I+TG E R
Sbjct: 185 ITVGLGGKAEFAAAVRELAVDVDAGDLDPESIDPADVSDRLVFPE--EPDLVIKTGAE-R 241
Query: 194 LSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
LSDF +WQ Y+E F W DF + + A+ + R RRFG
Sbjct: 242 LSDFAIWQSVYAELYFTDVNWRDFRKRDYLRAVLDFQDRQRRFG 285
>gi|56206242|emb|CAI21494.1| dehydrodolichyl diphosphate synthase [Homo sapiens]
Length = 155
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 70/132 (53%), Gaps = 3/132 (2%)
Query: 30 LPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIK---SFL 86
+ R GH +G E + +GI +T++AFSI N++R SE+ L+ L + S L
Sbjct: 2 VERQEGHSQGFNKLAETLRWCLNLGILEVTVYAFSIENFKRSKSEVDGLMDLARQKFSRL 61
Query: 87 KKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISR 146
+ L+K+ + +RV+G+ L D+ ++ +A T+ L + F Y+SR EIS
Sbjct: 62 MEEKEKLQKHGVCIRVLGDLHLLPLDLQELIAQAVQATKNYNKCFLNVCFAYTSRHEISN 121
Query: 147 AIKNIFQDIESG 158
A++ + +E G
Sbjct: 122 AVREMAWGVEQG 133
>gi|70954337|ref|XP_746220.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56526760|emb|CAH77319.1| hypothetical protein PC000141.02.0 [Plasmodium chabaudi chabaudi]
Length = 135
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 13 HI-GIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
HI IIMDGN R+A GL GH G + I+ ++ IK L++FAFS+ N+ R
Sbjct: 29 HIEAIIMDGNRRFAKQMGLQTSIGHYLGSKNLMHIIEICIQLNIKILSVFAFSLLNYNRT 88
Query: 72 VSEISELVKLIKSFLKKGFYSL---KKNNIKVRVIGN 105
E+ L L FL Y + K+N I++R+IGN
Sbjct: 89 PEEVHVLFYLNLFFLINEEYFIKFVKQNKIRIRIIGN 125
>gi|241574068|ref|XP_002403242.1| cis-prenyltransferase, putative [Ixodes scapularis]
gi|215500205|gb|EEC09699.1| cis-prenyltransferase, putative [Ixodes scapularis]
Length = 145
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P + +I DGN R+A A+G GH +G+ E AA GI+ L F S+NN+ R
Sbjct: 25 PHTVAVIPDGNRRYARAKGRSIHEGHNEGLSQL-EKATAAPSFGIRRLVTFLLSVNNFNR 83
Query: 71 PVSEISELVKLIKSFLK---KGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
E S L LI S L+ K ++ +VR +G+ L DI +AE TR N
Sbjct: 84 TEEEKSHLYALISSTLRNICKSCMRYRERGQRVRCVGDLEMLPRDIQRHAADAELSTRHN 143
>gi|206994193|emb|CAR79337.1| dehydrodolichyl diphosphate synthase [Oncorhynchus mykiss]
Length = 107
Score = 61.6 bits (148), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 1 MVASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ A+++ + P P H+ IMDGN R+A R + R GH +G + E + + I +T
Sbjct: 15 LSANILKAGPMPKHVAFIMDGNRRYARKRHVERQEGHTQGFDKLAETLRWCLNLSIHEVT 74
Query: 60 IFAFSINNWRRPVSEISELVKLIKS 84
++AFSI N++R E+ L++L K
Sbjct: 75 VYAFSIENFKRSKDEVDGLMELAKQ 99
>gi|237831087|ref|XP_002364841.1| dehydrodolichyl diphosphate synthase, putative [Toxoplasma gondii
ME49]
gi|211962505|gb|EEA97700.1| dehydrodolichyl diphosphate synthase, putative [Toxoplasma gondii
ME49]
gi|221507725|gb|EEE33329.1| dehydrodolichyl diphosphate synthase, putative [Toxoplasma gondii
VEG]
Length = 270
Score = 61.6 bits (148), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 16/152 (10%)
Query: 11 PDHIGIIMDGNGRWAAA-RGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IMDGN R+A + GHR G + + + E+GI+ +T++AF++ N+
Sbjct: 26 PRHVAFIMDGNRRFARRNKEASAVEGHRAGAHTLSVMCESCLELGIQFVTVYAFALGNFH 85
Query: 70 RPVSEISELVKLIKS-FLKK----GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
R E++ L+ L + F K GF+ K+ I++R +G+ L + L A +T
Sbjct: 86 RQPEEVTGLLNLAEEKFADKAWIDGFF--KRLGIRLRFLGDFSYLPPRLRSALATASRET 143
Query: 125 RLNTG--------LNLFIAFNYSSRDEISRAI 148
G L + + Y SR EI+RA+
Sbjct: 144 ADACGDPRGFGCRLLVTVCVAYGSRREIARAL 175
>gi|325067376|ref|ZP_08126049.1| undecaprenyl pyrophosphate synthetase [Actinomyces oris K20]
Length = 106
Score = 61.6 bits (148), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 50/82 (60%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ A + ++ P H+G+I+DGN RWA + G GH++G + E + A ++G++ +T+
Sbjct: 15 LAARIDPATVPHHVGVILDGNRRWAKSMGFGAAQGHKRGADKIEEFLGWAEQMGVQVVTL 74
Query: 61 FAFSINNWRRPVSEISELVKLI 82
+ S +N R +E+S L+ +I
Sbjct: 75 WLLSTDNLSRDPAELSPLLDII 96
>gi|221487943|gb|EEE26175.1| dehydrodolichyl diphosphate synthase, putative [Toxoplasma gondii
GT1]
Length = 270
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 16/152 (10%)
Query: 11 PDHIGIIMDGNGRWAAA-RGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IMDGN R+A + GHR G + + + E+GI+ +T++AF++ N+
Sbjct: 26 PRHVAFIMDGNRRFARRNKEASAVEGHRAGAHTLSVMCESCLELGIQFVTVYAFALGNFH 85
Query: 70 RPVSEISELVKLIKS-FLKK----GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
R E++ L+ L + F K GF+ K+ I++R +G+ L + L A +T
Sbjct: 86 RQPEEVTGLLNLAEEKFADKAWIDGFF--KRLGIRLRFLGDFSYLPPRLRSALATASRET 143
Query: 125 RLNTG--------LNLFIAFNYSSRDEISRAI 148
G L + + Y SR EI+RA+
Sbjct: 144 ADACGDPRGFGCRLLVTVCVAYGSRREIARAL 175
>gi|302349063|ref|YP_003816701.1| Undecaprenyl pyrophosphate synthetase [Acidilobus saccharovorans
345-15]
gi|302329475|gb|ADL19670.1| Undecaprenyl pyrophosphate synthetase [Acidilobus saccharovorans
345-15]
Length = 163
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 37/61 (60%)
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
+ VP DL+IRTGG +RLS F Q +Y+E F WP+F+RE AL + L+ R F
Sbjct: 102 AGVPPIDLVIRTGGMRRLSGFFPLQTSYAELYFTETLWPEFTREELKKALEWFELQKRNF 161
Query: 237 G 237
G
Sbjct: 162 G 162
>gi|315445629|ref|YP_004078508.1| undecaprenyl pyrophosphate synthase [Mycobacterium sp. Spyr1]
gi|315263932|gb|ADU00674.1| undecaprenyl pyrophosphate synthase [Mycobacterium sp. Spyr1]
Length = 226
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 86/201 (42%), Gaps = 17/201 (8%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+G++ DG RWA G +R+G E EI+ A ++ ++++ S N R
Sbjct: 14 PAHVGLVPDGLRRWAETNGATLTDAYRRGSEKVIEILLALQRNDVQTVSVYNLSRANLGR 73
Query: 71 PVSEISELVKLIKSFLKKGFYS-LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
E+ + F + VR+ G+R L ++ + + E + + G
Sbjct: 74 TDDELEAVYTASIYFFNALIPAHFDPATTSVRLHGDRSLLPNEYVAAAQHVESAS-ADDG 132
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ I Y + DE+ A +D C IA+ + DV DL+IRT
Sbjct: 133 FRINILAAYDAADELGEAYLRAQRD-----GCD-------IAEAFEIGDV---DLVIRTT 177
Query: 190 GEKRLSDFLLWQVAYSEFVFI 210
E LS FL +Q Y++ +F+
Sbjct: 178 PEPLLSGFLPYQSQYAQLIFL 198
>gi|302832029|ref|XP_002947579.1| hypothetical protein VOLCADRAFT_44343 [Volvox carteri f.
nagariensis]
gi|300266927|gb|EFJ51112.1| hypothetical protein VOLCADRAFT_44343 [Volvox carteri f.
nagariensis]
Length = 179
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 84/180 (46%), Gaps = 4/180 (2%)
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW R E++ L++L++ + L I++ G+R +L + V E+
Sbjct: 1 YAFSTENWERGREEVAFLMRLMERTIILEVPELHAQGIRLVFAGDRTALPNRCDEV-AES 59
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIE--SGSVCSHDVD-SSLIAKYLDTS 177
+ L + E + + + + +E + V S ++ ++ S
Sbjct: 60 LWMGHSSVFLRFPCFLGHDVWKEAPQGLHEVDKRVEWLTNRPLPEGVHLSDRLSTHMTHS 119
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
V DPD +IR E++LS+FLL AY+E F WP+F+ + + A+ + + RR+G
Sbjct: 120 LVGDPDPLIRVSWEQQLSNFLLSNCAYTELYFTSTCWPNFAEKGWEDAVRHFASKQRRYG 179
>gi|255522288|ref|ZP_05389525.1| undecaprenyl diphosphate synthase [Listeria monocytogenes FSL
J1-175]
Length = 73
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/50 (52%), Positives = 34/50 (68%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
P H+ IIMDGNGRWA R LPR AGH++G++V + A +GI LT+
Sbjct: 24 PRHVAIIMDGNGRWAKKRFLPRIAGHKEGMDVVKRVTRYANAIGIDVLTL 73
>gi|260204329|ref|ZP_05771820.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis K85]
gi|289573741|ref|ZP_06453968.1| short chain Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis K85]
gi|289538172|gb|EFD42750.1| short chain Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis K85]
Length = 202
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 79/159 (49%), Gaps = 4/159 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI ++ DGN RWA + G + G+R G E++ E GI+ T++ S N +
Sbjct: 32 PRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWCHEAGIELATVYLLSTENLQ 91
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E++ L+++I +++ N+ VR +G+ + ++ L+ A + T
Sbjct: 92 RDPDELAALIEIITDVVEE--ICAPANHWSVRTVGDLGLIGEEPARRLRGAVESTPEVAS 149
Query: 130 LNLFIAFNYSSRDEISRAIKNIF-QDIESGSVCSHDVDS 167
++ +A Y R EI A++ + +++ +G+ VD+
Sbjct: 150 FHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVDA 188
>gi|332023688|gb|EGI63912.1| Dehydrodolichyl diphosphate synthase [Acromyrmex echinatior]
Length = 108
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
Query: 53 VGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLK---KGFYSLKKNNIKVRVIGNRLSL 109
+GI +T++AFSI N++R E+ L+ L++ K + LK + I +RV GN L
Sbjct: 6 LGIAEVTVYAFSIENFKRNKEEVDNLIDLMRQKFKDLLENKKKLKDDGICIRVFGNLSLL 65
Query: 110 DDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNI 151
+DI ++ E TR N + + A Y+SRDEI+ AIK+I
Sbjct: 66 PEDICKLIAEVMIVTRENNRIFINFAVAYTSRDEITHAIKDI 107
>gi|327400914|ref|YP_004341753.1| Di-trans-poly-cis-decaprenylcistransferase [Archaeoglobus veneficus
SNP6]
gi|327316422|gb|AEA47038.1| Di-trans-poly-cis-decaprenylcistransferase [Archaeoglobus veneficus
SNP6]
Length = 195
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 56/116 (48%), Gaps = 6/116 (5%)
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
D+ R N LN+ R EI A++ + + +E G + +VD LI +L
Sbjct: 85 DRQRGNVRLNVIAGLG--GRAEIVEAVRKLAELVEKGELEPEEVDEELIEAFLRIKS--P 140
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDLI+R G + DFL+WQ YSE F+ W F F L Y R+RR+G
Sbjct: 141 PDLIVRAGA--LIPDFLIWQSIYSEMHFLDMDWKSFRYIDFLRCLRDYQRRERRYG 194
>gi|308446618|ref|XP_003087223.1| hypothetical protein CRE_13882 [Caenorhabditis remanei]
gi|308259556|gb|EFP03509.1| hypothetical protein CRE_13882 [Caenorhabditis remanei]
Length = 148
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 5/111 (4%)
Query: 1 MVASMMSSSP-PDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNL 58
++ ++S P P H+ +MDGN R+A ++ L GH KG +I+ GI+ +
Sbjct: 26 LLRRFIASGPIPRHVAFVMDGNRRFAKSKHLGNVIKGHEKGFVQLAKILDWCNRFGIREI 85
Query: 59 TIFAFSINNWRRPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNR 106
T++AFSI N++R E++ L++L + +K L + I R GNR
Sbjct: 86 TVYAFSIENFKRSEDEVTGLMRLAEEKFQKLLNDSEKLDEKRICFRFYGNR 136
>gi|225388938|ref|ZP_03758662.1| hypothetical protein CLOSTASPAR_02679 [Clostridium asparagiforme
DSM 15981]
gi|225044991|gb|EEG55237.1| hypothetical protein CLOSTASPAR_02679 [Clostridium asparagiforme
DSM 15981]
Length = 132
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 40/69 (57%)
Query: 170 IAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQY 229
+ L T DV DLIIR GG +RLS FL Q Y++F + +YWPDF+ + AL Y
Sbjct: 64 VGPCLKTEDVSRIDLIIRWGGRRRLSGFLPVQSVYADFYVVDDYWPDFTPDHITQALEWY 123
Query: 230 NLRDRRFGG 238
+ +D GG
Sbjct: 124 SGQDVTLGG 132
>gi|261884429|ref|ZP_06008468.1| undecaprenyl diphosphate synthase [Campylobacter fetus subsp.
venerealis str. Azul-94]
Length = 68
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 35/53 (66%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+H+ IIMDGNGRWA RGL R GH+ G V +IV+ + NLT++AFS
Sbjct: 5 NHLAIIMDGNGRWAKKRGLVRTNGHQIGANVVEDIVSYWRRNSLINLTLYAFS 57
>gi|299472388|emb|CBN77576.1| Di-trans-poly-cis-decaprenylcistransferase [Ectocarpus siliculosus]
Length = 192
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGN R+ + GH G + E + E G+ T FAFS NW+R
Sbjct: 80 PRHVAVIMDGNRRFGRVKYGDPLKGHSDGGKRLGEFLEWCMEAGVAVATAFAFSTENWKR 139
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGN 105
E+ L+ L+ + + K N+++RV+ +
Sbjct: 140 DAHEVKLLMDLVCTSCGELMEDAGKKNMRIRVLAS 174
>gi|1196916|gb|AAA88567.1| unknown protein [Streptomyces fradiae]
Length = 125
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW- 68
P HIG+IMDGN RWA G+ + GHR G E +++ GIK++T+F S N
Sbjct: 25 PKHIGLIMDGNRRWARQMGMANPSIGHRYGAEHVESVLSWCETAGIKHVTVFVCSTENLQ 84
Query: 69 RRPVSEISELVKLIKSFL 86
RR +E+S L+++I+ +
Sbjct: 85 RRGDTEVSFLMQVIEQVV 102
>gi|242001680|ref|XP_002435483.1| cis-prenyltransferase, putative [Ixodes scapularis]
gi|215498819|gb|EEC08313.1| cis-prenyltransferase, putative [Ixodes scapularis]
Length = 218
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P + ++ DG+ RWA RG P GH KG + ++ AA +G++ +F FS+ N+ R
Sbjct: 62 PSSLALVPDGHRRWAKQRGAPLHLGHIKGSSLLEQVQAAVLALGVRESYVFTFSVRNFGR 121
Query: 71 PVSEISELVKLIKSFLKKGFYSL-------KKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
P + +L + +K+ F S+ +K R G+ ++ + E
Sbjct: 122 PEKQRVDLF----NHMKRSFDSICNNWEFYQKKEWSFRTRGDIERFPKELHKRAAKMELL 177
Query: 124 TRLNTGL-NLFIAFNYSSRDEISRAIKNIFQDIESG 158
T + N++ Y SR +I+R + + G
Sbjct: 178 THQTSAKSNIYSCGPYESRHQITRMAVTLCHAVRDG 213
>gi|108800549|ref|YP_640746.1| di-trans-poly-cis-decaprenylcistransferase [Mycobacterium sp. MCS]
gi|119869688|ref|YP_939640.1| di-trans-poly-cis-decaprenylcistransferase [Mycobacterium sp. KMS]
gi|126436165|ref|YP_001071856.1| di-trans-poly-cis-decaprenylcistransferase [Mycobacterium sp. JLS]
gi|108770968|gb|ABG09690.1| Di-trans-poly-cis-decaprenylcistransferase [Mycobacterium sp. MCS]
gi|119695777|gb|ABL92850.1| Di-trans-poly-cis-decaprenylcistransferase [Mycobacterium sp. KMS]
gi|126235965|gb|ABN99365.1| Di-trans-poly-cis-decaprenylcistransferase [Mycobacterium sp. JLS]
Length = 210
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 87/210 (41%), Gaps = 23/210 (10%)
Query: 14 IGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVS 73
+G+I DG RWA A +R+G +I+ A E G++ ++++ S N R
Sbjct: 1 MGLIPDGLRRWADANKATLVDAYRRGAMKVVDILLALQEHGVQTVSVYNLSRANLARRDD 60
Query: 74 EISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDIL----CVLKEAEDQTRLNTG 129
E+ + F F +L N G R+ D D+L + +QT
Sbjct: 61 ELEAVFAASTHF----FSTLIPANFDHTACGVRIHGDLDLLPDEYVAAARSVEQTMTGRD 116
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ I Y + DE+ A + Q+ D+ ++L ++ D DL+IRT
Sbjct: 117 FRINILAAYDAADELRAAHRRARQN-------GCDITAAL--------EIGDVDLVIRTT 161
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSR 219
E LS FL Q Y++ +F+ D R
Sbjct: 162 PEPLLSGFLPLQSQYAQLMFLTTALNDLQR 191
>gi|213029203|ref|ZP_03343650.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. 404ty]
Length = 73
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 33/53 (62%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
H+ IIMDGNGRWA +G R GH+ G + V+ AA GI LT++AF +
Sbjct: 19 HVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIDALTLYAFRV 71
>gi|20270243|ref|NP_612468.1| nogo-B receptor precursor [Homo sapiens]
gi|74762651|sp|Q96E22|NGBR_HUMAN RecName: Full=Nogo-B receptor; Short=NgBR; AltName: Full=Nuclear
undecaprenyl pyrophosphate synthase 1 homolog; Flags:
Precursor
gi|15278225|gb|AAH13026.1| Nuclear undecaprenyl pyrophosphate synthase 1 homolog (S.
cerevisiae) [Homo sapiens]
gi|39645747|gb|AAH63794.1| Nuclear undecaprenyl pyrophosphate synthase 1 homolog (S.
cerevisiae) [Homo sapiens]
gi|44890420|gb|AAH66910.1| Nuclear undecaprenyl pyrophosphate synthase 1 homolog (S.
cerevisiae) [Homo sapiens]
gi|55665703|emb|CAH71370.1| nuclear undecaprenyl pyrophosphate synthase 1 homolog (S.
cerevisiae) [Homo sapiens]
gi|56208161|emb|CAI19895.1| nuclear undecaprenyl pyrophosphate synthase 1 homolog (S.
cerevisiae) [Homo sapiens]
gi|82571486|gb|AAI10326.1| Nuclear undecaprenyl pyrophosphate synthase 1 homolog (S.
cerevisiae) [Homo sapiens]
gi|119568586|gb|EAW48201.1| hCG1782986, isoform CRA_a [Homo sapiens]
gi|187956225|gb|AAI50655.1| Nuclear undecaprenyl pyrophosphate synthase 1 homolog (S.
cerevisiae) [Homo sapiens]
gi|187956505|gb|AAI50656.1| Nuclear undecaprenyl pyrophosphate synthase 1 homolog (S.
cerevisiae) [Homo sapiens]
Length = 293
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+D LN L + + + +I RA ++ Q + D+D +A L ++ P
Sbjct: 177 KDDQVLNCHLAVKVLSPEDGKADIVRAAQDFCQLVAQKQKRPTDLDVDTLASLLSSNGCP 236
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DPDL+++ G FL W + +E V +P + + S E FF AL QY ++R G
Sbjct: 237 DPDLVLKFGPVDSTLGFLPWHIRLTEIVSLPSHL-NISYEDFFSALRQYAACEQRLG 292
>gi|169835793|ref|ZP_02868981.1| undecaprenyl diphosphate synthase [candidate division TM7
single-cell isolate TM7a]
Length = 99
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 52/98 (53%)
Query: 54 GIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDI 113
G++ ++ + FS NW+R E+ L+ L+ L ++ NI+++++G+R +D I
Sbjct: 2 GVEYVSAYVFSTENWQRTKGEVKHLMGLVLRLLTDDLPEFERYNIRLKILGSRDGVDAKI 61
Query: 114 LCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNI 151
L + AE +T N L + FNY + ++ +K +
Sbjct: 62 LSAIDNAEAKTANNHSGTLALCFNYGGQQKLQMLLKRL 99
>gi|296199107|ref|XP_002747063.1| PREDICTED: nogo-B receptor-like [Callithrix jacchus]
Length = 159
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+D LN L + + + +I RA ++ Q + D+D ++ L ++ P
Sbjct: 43 KDDQVLNCHLAVKVLSAEDGKADIVRAAQDFCQLVAQKQKRPTDLDVDMLGSLLSSNGCP 102
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DPDL+++ G FL W + +E V +P + + S E FF AL QY ++R G
Sbjct: 103 DPDLVLKFGPVDSTLGFLPWHIRLTEIVSLPSHL-NISYEDFFSALRQYAACEQRLG 158
>gi|302565570|ref|NP_001181421.1| nogo-B receptor [Macaca mulatta]
Length = 293
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+D LN L + + + +I RA ++ Q + D+D ++ L ++ P
Sbjct: 177 KDDQVLNCHLAVKVLSPEDGKADIVRAAQDFCQLVAQKQKRPTDLDVDMLGSLLSSNGCP 236
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DPDL+++ G FL W + +E V +P + + S E FF AL QY ++R G
Sbjct: 237 DPDLVLKFGPVDSTLGFLPWHIRLTEIVSLPSHL-NISYEDFFSALRQYAACEQRLG 292
>gi|296814904|ref|XP_002847789.1| dehydrodolichyl diphosphate synthetase [Arthroderma otae CBS
113480]
gi|238840814|gb|EEQ30476.1| dehydrodolichyl diphosphate synthetase [Arthroderma otae CBS
113480]
Length = 245
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 8/96 (8%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGN R++ +RGL GH G ++ AA VGI+ +T++AFSI ++ RP ++
Sbjct: 1 MDGNRRFSRSRGLTIRNGHLLGAFALENVMGAAHAVGIEAITVYAFSIESFHRPKEQLMR 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDI 113
FL+ G + + I+VRV+G L+D+I
Sbjct: 61 -------FLRSGDI-IDRRGIRVRVLGRLELLNDNI 88
>gi|260204330|ref|ZP_05771821.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis K85]
gi|289573742|ref|ZP_06453969.1| short chain Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis K85]
gi|289538173|gb|EFD42751.1| short chain Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis K85]
Length = 171
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 68/140 (48%), Gaps = 3/140 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI ++ DGN RWA + G + G+R G E++ E GI+ T++ S N +
Sbjct: 32 PRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWCHEAGIELATVYLLSTENLQ 91
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E++ L+++I +++ N+ VR +G+ + ++ L+ A + T
Sbjct: 92 RDPDELAALIEIITDVVEE--ICAPANHWSVRTVGDLGLIGEEPARRLRGAVESTPEVAS 149
Query: 130 LNLFIAFNYSSRDEISRAIK 149
++ +A Y R EI ++
Sbjct: 150 FHVNVAVGYGGRREIVDVVR 169
>gi|119568587|gb|EAW48202.1| hCG1782986, isoform CRA_b [Homo sapiens]
Length = 145
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+D LN L + + + +I RA ++ Q + D+D +A L ++ P
Sbjct: 29 KDDQVLNCHLAVKVLSPEDGKADIVRAAQDFCQLVAQKQKRPTDLDVDTLASLLSSNGCP 88
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DPDL+++ G FL W + +E V +P + + S E FF AL QY ++R G
Sbjct: 89 DPDLVLKFGPVDSTLGFLPWHIRLTEIVSLPSHL-NISYEDFFSALRQYAACEQRLG 144
>gi|73946289|ref|XP_541219.2| PREDICTED: similar to CG4775-PA [Canis familiaris]
Length = 293
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 143 EISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQV 202
+I RA ++ Q + S D+D ++ L ++ PDPDL+++ G FL W +
Sbjct: 199 DIVRAAQDFCQLVAQQQKRSADLDVDMLDSLLSSTGFPDPDLVLKFGPVDSTLGFLPWHI 258
Query: 203 AYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+E V +P Y + S E FF AL QY ++R G
Sbjct: 259 RLTEIVSLPSYL-NISYEDFFSALRQYAACEQRLG 292
>gi|310118105|ref|XP_003120351.1| PREDICTED: nogo-B receptor-like [Homo sapiens]
gi|119579713|gb|EAW59309.1| chromosome 6 open reading frame 68 [Homo sapiens]
Length = 323
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+D LN L + + + +I RA ++ Q + D+D + L ++ P
Sbjct: 207 KDDQVLNCHLAVKVLSPEDGKADIVRAAQDFCQLVAQKQKRPTDLDVDTLGSLLSSNGCP 266
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DPDL+++ G FL W + +E V +P + + S E FF AL QY ++R G
Sbjct: 267 DPDLVLKFGPVDSTLGFLPWHIRLTEIVSLPSHL-NISYEDFFSALRQYAACEQRLG 322
>gi|193784995|dbj|BAG54148.1| unnamed protein product [Homo sapiens]
Length = 293
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+D LN L + + + +I RA ++ Q + D+D +A L ++ P
Sbjct: 177 KDDQVLNCHLAVKVLSPEDGKADIVRAAQDFCQLVAQKQKRPTDLDVDTLASLLSSNGCP 236
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DPDL+++ G FL W + +E V +P + + S E FF AL QY ++R G
Sbjct: 237 DPDLVLKFGPVDSTLGFLPWHIRLTETVSLPSHL-NISYEDFFSALRQYAACEQRLG 292
>gi|218513927|ref|ZP_03510767.1| undecaprenyl pyrophosphate synthase protein [Rhizobium etli 8C-3]
Length = 42
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 29/37 (78%)
Query: 207 FVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
F+F+PEYWPD+S E+F AL ++ RDRRFGGLS +
Sbjct: 1 FIFVPEYWPDYSPEIFRSALEKFASRDRRFGGLSSQA 37
>gi|148673133|gb|EDL05080.1| DNA segment, Chr 10, ERATO Doi 438, expressed [Mus musculus]
Length = 242
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+D LN + + + +I RA ++ Q + D+D L+ L + P
Sbjct: 126 KDDQDLNCPSAVKVLSPEDGKADIVRAAQDFCQLVAQQQRKPTDLDVDLLGSLLSSHGFP 185
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DPDL+++ G FL WQ+ +E V +P + + S E FF AL QY ++R G
Sbjct: 186 DPDLVLKFGPVDSTLGFLPWQIRLTEIVSLPSHL-NISYEDFFSALRQYAACEQRLG 241
>gi|194216392|ref|XP_001504211.2| PREDICTED: similar to nuclear undecaprenyl pyrophosphate synthase 1
homolog [Equus caballus]
Length = 428
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+D LN + + + +I RA ++ Q + S D+D +++ L ++ P
Sbjct: 312 KDDQVLNCQSAVKVLSPEDGKADIVRAAQDFCQLVAQQQKKSTDLDVAMLDSLLSSNGFP 371
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DPDL+++ G FL W + +E V +P + + S E FF AL QY ++R G
Sbjct: 372 DPDLVLKFGPVDSTLGFLPWHIRLTEIVSLPSHL-NISYEDFFSALRQYAACEQRLG 427
>gi|13384840|ref|NP_084526.1| nogo-B receptor precursor [Mus musculus]
gi|81880242|sp|Q99LJ8|NGBR_MOUSE RecName: Full=Nogo-B receptor; Short=NgBR; AltName: Full=Nuclear
undecaprenyl pyrophosphate synthase 1 homolog; Flags:
Precursor
gi|13096852|gb|AAH03223.1| Nuclear undecaprenyl pyrophosphate synthase 1 homolog (S.
cerevisiae) [Mus musculus]
Length = 297
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Query: 141 RDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLW 200
+ +I RA ++ Q + D+D L+ L + PDPDL+++ G FL W
Sbjct: 201 KADIVRAAQDFCQLVAQQQRKPTDLDVDLLGSLLSSHGFPDPDLVLKFGPVDSTLGFLPW 260
Query: 201 QVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
Q+ +E V +P + + S E FF AL QY ++R G
Sbjct: 261 QIRLTEIVSLPSHL-NISYEDFFSALRQYAACEQRLG 296
>gi|74198604|dbj|BAE39779.1| unnamed protein product [Mus musculus]
Length = 297
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Query: 141 RDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLW 200
+ +I RA ++ Q + D+D L+ L + PDPDL+++ G FL W
Sbjct: 201 KADIVRAAQDFCQLVAQQQRKPTDLDVDLLGSLLSSHGFPDPDLVLKFGPVDSTLGFLPW 260
Query: 201 QVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
Q+ +E V +P + + S E FF AL QY ++R G
Sbjct: 261 QIRLTEIVSLPSHL-NISYEDFFSALRQYAACEQRLG 296
>gi|112180385|gb|AAH18372.1| Nus1 protein [Mus musculus]
Length = 193
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+D LN + + + +I RA ++ Q + D+D L+ L + P
Sbjct: 77 KDDQDLNCPSAVKVLSPEDGKADIVRAAQDFCQLVAQQQRKPTDLDVDLLGSLLSSHGFP 136
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DPDL+++ G FL WQ+ +E V +P + + S E FF AL QY ++R G
Sbjct: 137 DPDLVLKFGPVDSTLGFLPWQIRLTEIVSLPSHL-NISYEDFFSALRQYAACEQRLG 192
>gi|332213125|ref|XP_003255669.1| PREDICTED: nogo-B receptor-like [Nomascus leucogenys]
Length = 293
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+D LN L + + + +I RA ++ Q + D+D + L ++ P
Sbjct: 177 KDDQVLNCHLAVKVLSPEDGKADIVRAAQDFCQLVAQKQKRPTDLDVDTLGSLLSSNGCP 236
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DPDL+++ G FL W + +E V +P + + S E FF AL QY ++R G
Sbjct: 237 DPDLVLKFGPVDSTLGFLPWHIRLTEIVSLPSHL-NISYEDFFSALRQYAACEQRLG 292
>gi|312438361|gb|ADQ77432.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus TCH60]
Length = 73
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 30/42 (71%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVA 48
SS+ P+HI IIMDGNGRWA R +PR GH +G++ +++
Sbjct: 32 SSNIPEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKLLG 73
>gi|311244042|ref|XP_001928107.2| PREDICTED: LOW QUALITY PROTEIN: nogo-B receptor [Sus scrofa]
Length = 381
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+D LN + + + +I RA ++ Q + S D+D ++ L ++ P
Sbjct: 265 KDDQVLNCQSAVKVLSPEDGKADIVRAAQDFCQLVAQQQKKSTDLDVDMLDSLLSSNGFP 324
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DPDL+++ G FL W + +E V +P + + S E FF AL QY ++R G
Sbjct: 325 DPDLVLKFGPVDSTLGFLPWHIRLTEIVSLPSHL-NISYEDFFSALRQYAACEQRLG 380
>gi|21226116|ref|NP_632038.1| undecaprenyl pyrophosphate synthetase [Methanosarcina mazei Go1]
gi|20904338|gb|AAM29710.1| Undecaprenyl pyrophosphate synthetase [Methanosarcina mazei Go1]
Length = 123
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%)
Query: 166 DSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHA 225
D + + + ++++P DL+IR GG RLS L Q YS+ + E WPDF E F A
Sbjct: 51 DGKKMIENIASAEIPRVDLLIRWGGRCRLSGMLPVQTVYSDIYVVDEMWPDFKPEHLFKA 110
Query: 226 LNQYNLRDRRFGG 238
L Y +D GG
Sbjct: 111 LEFYQNQDITLGG 123
>gi|315302966|ref|ZP_07873689.1| di-trans,poly-cis-decaprenylcistransferase [Listeria ivanovii FSL
F6-596]
gi|313628665|gb|EFR97075.1| di-trans,poly-cis-decaprenylcistransferase [Listeria ivanovii FSL
F6-596]
Length = 59
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 27/36 (75%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEI 46
P H+ IIMDGNGRWA R LPR AGH++G++V +
Sbjct: 24 PRHVAIIMDGNGRWAKKRFLPRIAGHKEGMDVVKRV 59
>gi|224157244|ref|XP_002337819.1| predicted protein [Populus trichocarpa]
gi|222869858|gb|EEF06989.1| predicted protein [Populus trichocarpa]
Length = 199
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 85/187 (45%), Gaps = 25/187 (13%)
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNN------IKVRVIGNRLSLDDDILCV 116
FSI+N+++ I L+ SFL+ +K+++ I+V GN L + +
Sbjct: 1 FSIDNFKQRPDGIQ---PLMDSFLEHVEGLMKEDSLVSRYGIRVYFQGNLELLSEPVRLA 57
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD------------ 164
+ A T N+ L L + Y+S + I A++ ++ G + ++
Sbjct: 58 AENAMLATAHNSKLLLIVCIAYTSTNVIVHAVQESCREKWGGIIVLNESAEPEENEKNDG 117
Query: 165 ---VDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS-RE 220
V + + K + + +PD++IRT G+ RLS FLLWQ + F +WP+ R
Sbjct: 118 ESFVKVTDVDKNMYMAIAAEPDILIRTSGDTRLSYFLLWQTTCTYLYFPSAFWPEIGFRH 177
Query: 221 LFFHALN 227
L + LN
Sbjct: 178 LLWAILN 184
>gi|297695479|ref|XP_002824967.1| PREDICTED: nogo-B receptor-like [Pongo abelii]
Length = 293
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+D LN L + + + +I RA ++ Q + D+D + L ++ P
Sbjct: 177 KDDQVLNCHLAVKVLSPEDGKADILRAAQDFCQLVAQKQKRPTDLDVDTLGSLLSSNGCP 236
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DPDL+++ G FL W + +E V +P + + S E FF AL QY ++R G
Sbjct: 237 DPDLVLKFGPVDSTLGFLPWHIRLTEIVSLPSH-LNISYEDFFSALRQYAACEQRLG 292
>gi|56206241|emb|CAI21493.1| dehydrodolichyl diphosphate synthase [Homo sapiens]
Length = 169
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 151 IFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQ 201
I Q +++ ++D+ SL+ K L T+ P PD++IRT GE RLSDFLLWQ
Sbjct: 40 IAQAVQATKNYNNDISESLLDKCLYTNRSPHPDILIRTSGEVRLSDFLLWQ 90
>gi|126310498|ref|XP_001369297.1| PREDICTED: similar to chromosome 6 open reading frame 68
[Monodelphis domestica]
Length = 300
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
+ EDQ LN ++ + +++I RA ++ Q + S D+D +++ L +
Sbjct: 183 DKEDQV-LNCQSSVKVLSPEDGKEDIVRAARDFCQLVAQQQKKSTDMDVNILGNLLSLNG 241
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDPDL+++ G +L W + +E + +P + + S E FF AL +Y ++R G
Sbjct: 242 FPDPDLVLKFGPVDSTLGYLPWHIRLTEIISLPSHL-NISYEDFFSALRRYAACEQRLG 299
>gi|119497973|ref|XP_001265744.1| hypothetical protein NFIA_034130 [Neosartorya fischeri NRRL 181]
gi|119413908|gb|EAW23847.1| hypothetical protein NFIA_034130 [Neosartorya fischeri NRRL 181]
Length = 94
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y+SRDE++RA+ ++ ++ + ++ L T D P DL++R+ G RLSDF
Sbjct: 3 YTSRDEMARAMLRCVEEYPHTAITAQS-----LSDKLHTGDNPPVDLVVRSSGMYRLSDF 57
Query: 198 LLWQVAYSEFVFIPE-YWPDF-SRELFFHALNQYNLR 232
LLWQ + I + WP+F + E F + Y R
Sbjct: 58 LLWQCHEDTQIQIADAMWPEFGAWEPFMRLYDLYQAR 94
>gi|281202833|gb|EFA77035.1| hypothetical protein PPL_09788 [Polysphondylium pallidum PN500]
Length = 523
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 65/117 (55%), Gaps = 3/117 (2%)
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCV 116
++AFSI N++RP E++ L++L + + L+K +++R++G+ + + +
Sbjct: 329 VYAFSIENFKRPQHEVNYLMELANQKFGEVISRSHKLQKLGVRIRIVGDISHIPEKTQII 388
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKY 173
L +A T NT L I +Y+S +E+ +++ + + +E + + D+D +L K+
Sbjct: 389 LAKAVKATESNTKALLNICMSYTSHEEMLHSMRTLSKGVEDKVIRTEDIDQNLFEKF 445
>gi|327261654|ref|XP_003215644.1| PREDICTED: nogo-B receptor-like [Anolis carolinensis]
Length = 291
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Query: 141 RDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLW 200
+ +I RA + + D+D +++ L T+ PDPDLI++ G + FL W
Sbjct: 195 KTDIVRAAQKFCHLVAQKQKKCTDLDMNVLENLLSTNGFPDPDLILKFGPVDSVLGFLPW 254
Query: 201 QVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
Q+ +E V +P + + S E FF AL Y D+R G
Sbjct: 255 QIRLTEIVSLPSH-VNVSYEEFFSALCHYADCDQRVG 290
>gi|74204379|dbj|BAE39943.1| unnamed protein product [Mus musculus]
Length = 297
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Query: 141 RDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLW 200
+ +I RA ++ + + D+D L+ L + PDPDL+++ G FL W
Sbjct: 201 KADIVRAAQDFCKLVAQQQRKPTDLDVDLLGSLLSSHGFPDPDLVLKFGPVDSTLGFLPW 260
Query: 201 QVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
Q+ +E V +P + + S E FF AL QY ++R G
Sbjct: 261 QIRLTEIVSLPSHL-NISYEDFFSALRQYAACEQRLG 296
>gi|22213621|gb|AAM92879.1| cis-prenyltransferase 12 [Hevea brasiliensis]
Length = 183
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 28/168 (16%)
Query: 97 NIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIE 156
+I VR +GN L + + + T N+ L IA Y+S DEI A++ ++
Sbjct: 15 DICVRFVGNLKLLSEPVKTAADKIMRATANNSKCVLLIAVCYTSTDEIVHAVEE-SSELN 73
Query: 157 SGSVCSH------------------DVDSSLIAKYLD----TSDVPDPDLIIRTGGEKRL 194
S VC++ +++S K +D T P PD++IRT GE RL
Sbjct: 74 SNEVCNNQELEEANATGSGTVIQIENMESYSGIKLVDLEKNTYINPYPDVLIRTSGETRL 133
Query: 195 SDFLLWQVAYSEFVFIPEYWPDFS-RELFFHALNQYNLRDRRFGGLSK 241
S++LLWQ WP+ R + + +N R + L K
Sbjct: 134 SNYLLWQTTNCILYSPHALWPEIGLRHVVWAVINC----QRHYSYLEK 177
>gi|126540556|emb|CAM46101.1| dehydrodolichyl diphosphate synthase [Mus musculus]
gi|126541188|emb|CAM46078.1| dehydrodolichyl diphosphate synthase [Mus musculus]
Length = 168
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%)
Query: 149 KNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVA 203
+ I I++ ++DV SL+ K L ++ P PD++IRT GE RLSDFLLWQ A
Sbjct: 38 EKIAHAIQATKNYNNDVSESLLDKCLYSNHSPHPDILIRTSGEVRLSDFLLWQKA 92
>gi|301783741|ref|XP_002927286.1| PREDICTED: LOW QUALITY PROTEIN: nogo-B receptor-like [Ailuropoda
melanoleuca]
Length = 325
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 143 EISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQV 202
+I RA ++ Q + S D+D + L ++ PDPDL+++ G FL W +
Sbjct: 231 DIVRAAQDFCQLVAQQQKRSTDLDVDMFNSLLSSAGFPDPDLVLKFGPVDSTLGFLPWHI 290
Query: 203 AYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+E + +P + + S E FF AL+QY ++R G
Sbjct: 291 RLTEIISLPSHL-NISYEDFFSALHQYAACEQRLG 324
>gi|82595919|ref|XP_726047.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
gi|23481290|gb|EAA17612.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 107
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 41/66 (62%), Gaps = 6/66 (9%)
Query: 143 EISRAIKN--IFQ-DIESGSVCSHDVDSSLIAKY---LDTSDVPDPDLIIRTGGEKRLSD 196
+I+ IKN I Q G CS D + I Y L T+D+P PD++IRT GE+RLSD
Sbjct: 40 QINPKIKNTQISQVQCNCGKACSLDENQIKILNYHNKLLTADLPPPDILIRTSGEQRLSD 99
Query: 197 FLLWQV 202
F+L+QV
Sbjct: 100 FMLYQV 105
>gi|241997690|ref|XP_002433494.1| Nogo-B receptor, putative [Ixodes scapularis]
gi|215490917|gb|EEC00558.1| Nogo-B receptor, putative [Ixodes scapularis]
Length = 266
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 76 SELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIA 135
SEL K + KK F S + + + V G + E + +++ +A
Sbjct: 116 SELYKEVLRSQKKHFGSCDTSKVVLYVEGKETT----------EKNGRNGYTHHVHVRLA 165
Query: 136 FNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLS 195
N R ++ + + Q+++ G + D+ LI K + + D PDPD+++R G +
Sbjct: 166 SNEDGRPLFAKFARKLCQEVKEGRLSPSDIVPDLIQKQV-SGDWPDPDILLRFGKAHSVF 224
Query: 196 DFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+ WQ+ +E + +P + + F AL Y+ R++RFG
Sbjct: 225 GYQPWQLRLTEIISLPTH-HNLRLSEFLGALRTYDNREQRFG 265
>gi|322781687|gb|EFZ10269.1| hypothetical protein SINV_11806 [Solenopsis invicta]
Length = 79
Score = 52.0 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGN R+A R + + GH KG + E + ++GIK +T++AFSI N+ R E+
Sbjct: 1 MDGNRRYAQKRNMTKKEGHLKGFDKMIETLNWCMDLGIKEITVYAFSIGNFNRSQEELDG 60
Query: 78 LVKLIKSFLKKGFYSLKKN 96
L+ L ++ F +L KN
Sbjct: 61 LMDLS----RQKFNNLLKN 75
>gi|119194363|ref|XP_001247785.1| hypothetical protein CIMG_01556 [Coccidioides immitis RS]
Length = 287
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 165 VDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFF 223
+ + + ++ T+D P DL+IRT G +RLSDF+LWQ ++ +F+ WP F F
Sbjct: 174 ISTQTLDDHMLTADSPPLDLLIRTSGVERLSDFMLWQCHEDTDIIFLDTLWPSFGLWDFL 233
Query: 224 HALNQYNLRDRRFG 237
L ++ R R+ G
Sbjct: 234 PVLWEWQWRVRKQG 247
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 93 LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIF 152
L + VRV+G R + D+L + A + T N L I F Y+SRDEI+ AI+N
Sbjct: 16 LDRYGASVRVLGRRELVKADVLEAIDRAVELTSRNGDAILNICFPYTSRDEITSAIRNTV 75
Query: 153 QD 154
D
Sbjct: 76 ID 77
>gi|55627276|ref|XP_518713.1| PREDICTED: nogo-B receptor-like [Pan troglodytes]
Length = 293
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
+ +DQ N L + + + +I RA ++ Q + D+D + L ++
Sbjct: 176 DKDDQVS-NCHLAVKVLSPEDGKADIVRAAQDFCQLVAQKQKRPTDLDVDTLGSLLSSNG 234
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDPDL+++ G FL W + +E V +P + + S E FF AL QY ++R G
Sbjct: 235 CPDPDLVLKFGPVDSTLGFLPWHIRLTEIVSLPSHL-NISYEDFFSALRQYAACEQRLG 292
>gi|114692525|ref|XP_001141832.1| PREDICTED: similar to Chromosome 6 open reading frame 68 [Pan
troglodytes]
gi|332864110|ref|XP_003318219.1| PREDICTED: nogo-B receptor [Pan troglodytes]
Length = 308
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 141 RDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLW 200
+ +I RA ++ Q + D+D + L ++ PDPDL+++ G FL W
Sbjct: 212 KADIVRAAQDFCQLVAQKQKRPTDLDVDTLGSLLSSNGCPDPDLVLKFGPVDSTLGFLPW 271
Query: 201 QVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+ +E V +P + + S E FF AL QY ++R G
Sbjct: 272 HIRLTEIVSLPSHL-NISYEDFFSALRQYAACEQRLG 307
>gi|294671222|ref|ZP_06736075.1| hypothetical protein NEIELOOT_02932 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307050|gb|EFE48293.1| hypothetical protein NEIELOOT_02932 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 66
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 35 GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKL 81
GH+KG++ + A + G++ LT+FAFS NWRRP E+ L+ L
Sbjct: 2 GHKKGLDALENLCAECSAAGVEYLTVFAFSTENWRRPSDEVGFLMGL 48
>gi|297678993|ref|XP_002817336.1| PREDICTED: LOW QUALITY PROTEIN: nogo-B receptor-like [Pongo abelii]
Length = 478
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 3/120 (2%)
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+D LN L + + + +I RA ++ Q + D+D + L ++ P
Sbjct: 350 KDDQVLNCHLAVKVLSPEDGKADIVRAAQDFCQLVAQKQKRPTDLDVDTLGSLLSSNGCP 409
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWP---DFSRELFFHALNQYNLRDRRFG 237
DPDL+++ G FL W + +E V + P + S E FF AL QY ++R G
Sbjct: 410 DPDLVLKFGPVDSTLGFLPWHIRLTEIVXLFASIPTTLNISYEDFFSALRQYAACEQRLG 469
>gi|241574066|ref|XP_002403241.1| undecaprenyl pyrophosphate synthetase, putative [Ixodes scapularis]
gi|215500204|gb|EEC09698.1| undecaprenyl pyrophosphate synthetase, putative [Ixodes scapularis]
Length = 163
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%)
Query: 155 IESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYW 214
+ G + D+ LI +Y D PD D ++RT GE+RLSDFLL Q YS +Y+
Sbjct: 9 VRDGLLEPSDITEDLIDEYNKIEDAPDVDFLLRTSGERRLSDFLLLQSNYSLIQVERKYF 68
Query: 215 PDFSRELFFHALNQYN 230
P+ + + AL ++
Sbjct: 69 PECTPRDVWRALLSFS 84
>gi|225388937|ref|ZP_03758661.1| hypothetical protein CLOSTASPAR_02678 [Clostridium asparagiforme
DSM 15981]
gi|225044990|gb|EEG55236.1| hypothetical protein CLOSTASPAR_02678 [Clostridium asparagiforme
DSM 15981]
Length = 117
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGII DGN RWA G+ + G+R GI + ++GI+ ++ + F+++N +R
Sbjct: 4 PQHIGIIPDGNRRWAVQNGMEKQDGYRHGISPGLSLYRTCRDLGIREMSFYGFTVDNTKR 63
>gi|197127299|gb|ACH43797.1| hypothetical protein [Taeniopygia guttata]
Length = 282
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 139 SSRDE---ISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD-TSDVPDPDLIIRTGGEKRL 194
SS DE I +A +N Q + D+D +++ L T+ PDPDL+++ G
Sbjct: 180 SSEDEKADIVKAAQNFCQLVAQQQRTHSDLDVNMLDNLLSSTNGFPDPDLVLKFGPVDST 239
Query: 195 SDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
FL W + +E + +P + + S E FF AL+ Y ++R+G
Sbjct: 240 LGFLPWHIRLTEIISLPSHL-NISYEDFFSALHHYAACEQRWG 281
>gi|291519554|emb|CBK74775.1| Undecaprenyl pyrophosphate synthase [Butyrivibrio fibrisolvens
16/4]
Length = 36
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/29 (62%), Positives = 23/29 (79%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKG 39
P+HI II+DGNGRWA ++G+PR GH G
Sbjct: 4 PEHIAIILDGNGRWAKSKGMPRTYGHTVG 32
>gi|213512010|ref|NP_001133241.1| Nogo-B receptor [Salmo salar]
gi|209147404|gb|ACI32888.1| Nogo-B receptor precursor [Salmo salar]
Length = 281
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYL-DTS 177
+ +DQ L+ L + + I +A + + + +E S D++ +++ L ++
Sbjct: 162 DKQDQQVLSCQSVLKVLSPDDGKLRIVQAAQQLCRAVEQREKTSKDINVTVLDSLLRESK 221
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDPDL+++ G + FL W + +EF+ +P + D S E F AL +Y ++R G
Sbjct: 222 STPDPDLVLKFGPVESTLGFLPWHIRLTEFISLPSH-VDVSYEDLFSALQRYASCEQRLG 280
>gi|224048245|ref|XP_002190167.1| PREDICTED: nuclear undecaprenyl pyrophosphate synthase 1
[Taeniopygia guttata]
Length = 280
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 141 RDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD-TSDVPDPDLIIRTGGEKRLSDFLL 199
+ +I +A +N Q + D+D +++ L T+ PDPDL+++ G FL
Sbjct: 183 KADIVKAAQNFCQLVAQQQRTHSDLDVNMLDNLLSSTNGFPDPDLVLKFGPVDSTLGFLP 242
Query: 200 WQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
W + +E + +P + + S E FF AL+ Y ++R+G
Sbjct: 243 WHIRLTEIISLPSHL-NISYEDFFSALHHYAACEQRWG 279
>gi|197127300|gb|ACH43798.1| hypothetical protein [Taeniopygia guttata]
Length = 282
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 141 RDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD-TSDVPDPDLIIRTGGEKRLSDFLL 199
+ +I +A +N Q + D+D +++ L T+ PDPDL+++ G FL
Sbjct: 185 KADIVKAAQNFCQLVAQQQRTHSDLDVNMLDNLLSSTNGFPDPDLVLKFGPVDSTLGFLP 244
Query: 200 WQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
W + +E + +P + + S E FF AL+ Y ++R+G
Sbjct: 245 WHIRLTEIISLPSHL-NISYEDFFSALHHYAACEQRWG 281
>gi|11498314|ref|NP_069541.1| hypothetical protein AF0707 [Archaeoglobus fulgidus DSM 4304]
gi|2649909|gb|AAB90534.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
Length = 207
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 54/107 (50%), Gaps = 7/107 (6%)
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV 179
E++ L +N+ ++ R+EI ++ + + +E G + +VD +L K+L T
Sbjct: 96 VEEKDGLKPTINIL---TFTGREEIINVVRKVAKMVERGELEVDEVDENLFEKFL-TIKS 151
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHAL 226
P PD+II+ G + + DFL+WQ Y+E F W + F L
Sbjct: 152 P-PDMIIKAGND--IPDFLIWQGIYAELYFADIDWQNLRYADFLRIL 195
>gi|118088626|ref|XP_419766.2| PREDICTED: hypothetical protein [Gallus gallus]
gi|326915999|ref|XP_003204299.1| PREDICTED: nogo-B receptor-like [Meleagris gallopavo]
Length = 177
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD-T 176
++ DQ LN L + + +I +A +N Q + D+D +++ L T
Sbjct: 58 QDKADQV-LNCQSTLKVLSPEDGKADIVKAAQNFCQLVAQQQRTYTDLDVNVLDNLLSST 116
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
S PDPDL+++ G FL W + +E + +P + + S E FF AL++Y ++R+
Sbjct: 117 SGFPDPDLVLKFGPVDSTLGFLPWHIRLTEIISLPSH-QNISYEDFFSALHRYAACEQRW 175
Query: 237 G 237
G
Sbjct: 176 G 176
>gi|288931400|ref|YP_003435460.1| Di-trans-poly-cis-decaprenylcistransferase [Ferroglobus placidus
DSM 10642]
gi|288893648|gb|ADC65185.1| Di-trans-poly-cis-decaprenylcistransferase [Ferroglobus placidus
DSM 10642]
Length = 198
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 5/106 (4%)
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+F+ + ++EI A+K I + + + + ++ +I + L PDLII+ +
Sbjct: 97 VFVNVGITGKEEILLAVKEILKKKDLSEIDLNSIEK-MIEENLRFK--IQPDLIIK--AD 151
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+ +FL+WQ+ YSE F+ W F F L Y R+RR+G
Sbjct: 152 DSVPEFLIWQIVYSELYFLDADWESFRYIDFLRCLRDYQRRERRYG 197
>gi|255918181|ref|NP_001157629.1| nuclear undecaprenyl pyrophosphate synthase 1 [Rattus norvegicus]
gi|149038647|gb|EDL92936.1| similar to hypothetical protein D10Ertd438e (predicted), isoform
CRA_a [Rattus norvegicus]
gi|149038648|gb|EDL92937.1| similar to hypothetical protein D10Ertd438e (predicted), isoform
CRA_a [Rattus norvegicus]
Length = 293
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 141 RDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLW 200
+ +I RA ++ Q + ++ L+ L + PDPDL+++ G FL W
Sbjct: 197 KADIVRAAQDFCQSVAQQQRRPTELGVELLDSLLSSHGFPDPDLVLKFGPVDSTLGFLPW 256
Query: 201 QVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
Q+ +E + +P + + S E F AL QY ++R G
Sbjct: 257 QIRLTEIISLPSH-SNISYEDLFSALRQYAACEQRLG 292
>gi|149572624|ref|XP_001517963.1| PREDICTED: similar to chromosome 6 open reading frame 68
[Ornithorhynchus anatinus]
Length = 172
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
E E+Q LN + + + +I RA ++ Q + S D+D +++ L +
Sbjct: 55 EKEEQV-LNCQSAVKVLSPEDGKADIVRAARDFCQLVAQQQKRSTDMDVNVLDNLLSSDG 113
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDPDL+++ G +L W + +E V +P + D S E F AL+ Y ++R G
Sbjct: 114 FPDPDLVLKFGPVDSTLGYLPWHIRLTEIVSLPSHL-DVSYEDFLSALHCYAACEQRLG 171
>gi|315931168|gb|EFV10141.1| undecaprenyl diphosphate synthase [Campylobacter jejuni subsp.
jejuni 327]
Length = 54
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
++R G KRLS+FLLWQ +Y+E F +P ++ F + ++ R+R FG
Sbjct: 1 MLRVGNAKRLSNFLLWQCSYAEIYFSETLFPSLTKREFKRIIKEFRNRERTFG 53
>gi|82595921|ref|XP_726048.1| undecaprenyl pyrophosphate synthetase-like-related [Plasmodium
yoelii yoelii str. 17XNL]
gi|23481291|gb|EAA17613.1| undecaprenyl pyrophosphate synthetase-like-related [Plasmodium
yoelii yoelii]
Length = 76
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 36/69 (52%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGN R+A GL GH G + I+ ++ IK L++FAFS+ N+ R EI
Sbjct: 1 MDGNRRFAKQMGLHTSIGHYLGSKNLIHIIELCIQLNIKILSVFAFSLLNYNRSPEEIHI 60
Query: 78 LVKLIKSFL 86
L L FL
Sbjct: 61 LFYLNLFFL 69
>gi|325119940|emb|CBZ55493.1| GF20994, related [Neospora caninum Liverpool]
Length = 219
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 14/117 (11%)
Query: 52 EVGIKNLTIFAFSINNWRRPVSEISELVKLIKS-FLKKGFYS--LKKNNIKVRVIGNRLS 108
E+GI+ +T++AF++ N+ R +E++ L+ L + F KG+ K+ I++R +G+
Sbjct: 7 ELGIQFVTVYAFALGNFHRDPAEVTGLLNLAEEKFADKGWIDGFFKRLGIRLRFLGDFSY 66
Query: 109 LDDDILCVLKEAEDQTR--------LNTGLNLFIAFNYSSRDEISRAIK---NIFQD 154
L D + L A +T L L + + Y SR EI+RA+ ++ QD
Sbjct: 67 LPDRLRTALATAVQETSEACADPNGLGCRLLVTVCVAYGSRREIARALAGEVSLLQD 123
>gi|328790733|ref|XP_001120453.2| PREDICTED: nogo-B receptor-like [Apis mellifera]
Length = 222
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 54/108 (50%), Gaps = 1/108 (0%)
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ +F+ + + EI K + + + +G++ +++ L+ + L++ +PDPDL I G
Sbjct: 115 MRIFLLSSLDGKKEIVSLTKTLAEAVITGTIKPEEINIELLDEKLNSRKMPDPDLGIIYG 174
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
L WQ +EF +P + S + F L +YN ++R+G
Sbjct: 175 RVCSTYGVLPWQTRITEFYMLPLH-ISLSAKDFICLLEKYNKSEQRYG 221
>gi|145477969|ref|XP_001425007.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392075|emb|CAK57609.1| unnamed protein product [Paramecium tetraurelia]
Length = 173
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 8/106 (7%)
Query: 46 IVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGN 105
IV ++GI L+ F W+RPV E+ +++ ++ +LK KK ++V
Sbjct: 13 IVEGCHQLGINYLSGFLLLSEKWKRPVGELKAILRFMEYYLKIKEICCKKWCLQV----- 67
Query: 106 RLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNI 151
L + +++E ED T N L L IAF+Y R++I + K +
Sbjct: 68 ---LSPFMQKLIQEVEDLTANNRYLRLKIAFSYCGRNDICKLCKKL 110
>gi|50539772|ref|NP_001002356.1| nogo-B receptor precursor [Danio rerio]
gi|82183326|sp|Q6DHR8|NGBR_DANRE RecName: Full=Nogo-B receptor; Short=NgBR; AltName: Full=Nuclear
undecaprenyl pyrophosphate synthase 1 homolog; Flags:
Precursor
gi|49900370|gb|AAH75899.1| Zgc:92136 [Danio rerio]
gi|169146317|emb|CAQ13476.1| novel protein (zgc:92136) [Danio rerio]
Length = 274
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 141 RDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYL-DTSDVPDPDLIIRTGGEKRLSDFLL 199
R I +A + + + +E S D++ S++ L ++ ++PDPDL+++ G + FL
Sbjct: 177 RLSIVQAAQQLCRAVEQKEKTSKDINVSVLDSLLKESKNIPDPDLVLKFGTVQSTLGFLP 236
Query: 200 WQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
W + +E + +P + D S + + AL ++ ++R G
Sbjct: 237 WHIRLTEIISMPSH-IDASYDDLYDALQRFAGCEQRLG 273
>gi|322794684|gb|EFZ17665.1| hypothetical protein SINV_13250 [Solenopsis invicta]
Length = 130
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+N+ + N S+ +I +++ + I SG + ++ LI + L ++PDPDL + G
Sbjct: 25 INVSLLSNVDSKGKIVTLAQSLGKAISSGDLDPKEITDELITEKLQIKEMPDPDLALIYG 84
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
L W +EF+ +P Y + S + F + L +YN +R+
Sbjct: 85 YTYSTHGILPWHTRTTEFLMLPMYV-NVSVKDFIYLLERYNKCIQRY 130
>gi|290563066|gb|ADD38927.1| Nogo-B receptor [Lepeophtheirus salmonis]
Length = 261
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 13/124 (10%)
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSH--------DVDSSLIAKYL 174
++ L + LNL IA + + +AI ++ D++S ++ S+ D+ LI L
Sbjct: 143 KSTLKSCLNLRIASHLDGK----KAIADLANDLKSKTLHSYSSSVIKPEDISEKLIHSLL 198
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
T +PDPD++IR GG + FL W + +E +F + ++Y+ ++
Sbjct: 199 TTDSLPDPDVLIRCGGLESNMGFLPWHIRLAE-IFDLYSHKGLRKADVISIFHKYSRCEK 257
Query: 235 RFGG 238
RFG
Sbjct: 258 RFGA 261
>gi|207111315|ref|ZP_03245477.1| putative undecaprenyl pyrophosphate synthase [Helicobacter pylori
HPKX_438_CA4C1]
Length = 44
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEI 46
H+ IIMDGNGRWA + R GH+KG++ +I
Sbjct: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDI 40
>gi|207108680|ref|ZP_03242842.1| hypothetical protein HpylH_04134 [Helicobacter pylori
HPKX_438_CA4C1]
Length = 50
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 2 RLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 48
>gi|330956444|gb|EGH56704.1| sigma-54 factor, interaction region [Pseudomonas syringae Cit 7]
Length = 47
Score = 44.3 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 20/29 (68%), Positives = 23/29 (79%), Gaps = 1/29 (3%)
Query: 173 YLD-TSDVPDPDLIIRTGGEKRLSDFLLW 200
YLD D+P PDL IRTGGE R+S+FLLW
Sbjct: 19 YLDEIGDLPLPDLCIRTGGEHRISNFLLW 47
>gi|159476404|ref|XP_001696301.1| predicted protein [Chlamydomonas reinhardtii]
gi|158282526|gb|EDP08278.1| predicted protein [Chlamydomonas reinhardtii]
Length = 386
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 139 SSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT-SDVPDPDLIIRTGGEKRLSDF 197
S+ +E A+ + + G + DV + L T D P DL++RT GE RLSDF
Sbjct: 215 SASEESVAAVSELQAAVRQGLLQPGDVTPVALHGALRTRHDCPPVDLLVRTSGETRLSDF 274
Query: 198 LLWQV 202
LLWQ
Sbjct: 275 LLWQA 279
>gi|224148360|ref|XP_002336638.1| predicted protein [Populus trichocarpa]
gi|222836414|gb|EEE74821.1| predicted protein [Populus trichocarpa]
Length = 196
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Query: 143 EISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQV 202
E SR + +++S + DVDS + Y+ + +PD++IR+ GE RLS+FLLWQ
Sbjct: 126 EASRTGDGVIPNVKSEKLLVVDVDSHM---YMSVA--TNPDIVIRSSGENRLSNFLLWQT 180
Query: 203 A 203
+
Sbjct: 181 S 181
>gi|194670088|ref|XP_604346.4| PREDICTED: chromosome 6 open reading frame 68-like [Bos taurus]
Length = 278
Score = 43.5 bits (101), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 174 LDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
L ++ PDPDL+++ G FL W + +E + +P + + S E FF AL QY +
Sbjct: 215 LSSNGFPDPDLVLKFGPVDSTLGFLPWHIRLTEIISLPSHL-NISYEDFFSALRQYAACE 273
Query: 234 RRFG 237
+R G
Sbjct: 274 QRLG 277
>gi|156386671|ref|XP_001634035.1| predicted protein [Nematostella vectensis]
gi|156221113|gb|EDO41972.1| predicted protein [Nematostella vectensis]
Length = 251
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 52/117 (44%), Gaps = 2/117 (1%)
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD-TSDVP 180
D T T + + + + +I A + ++ +D+ L L T+ +P
Sbjct: 135 DHTLAPTQVCITVLSAEDGKQDIVEAAQEFCMSVKQKKYSPKQLDTDLFNDMLKATTGLP 194
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DPDL ++ G + FL WQ+ +EF+ + + F +L +Y+ ++RFG
Sbjct: 195 DPDLALKFGAVSSVMGFLPWQIRLTEFL-THQTHHNVKYSAFLQSLQKYSRCEKRFG 250
>gi|21707890|gb|AAH34152.1| Similar to hypothetical protein FLJ13102 [Homo sapiens]
Length = 124
Score = 42.7 bits (99), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
RLSDFLLWQ ++S VF P WP+++ F A+ Q+ +
Sbjct: 2 RLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQM 40
>gi|145628148|ref|ZP_01783949.1| undecaprenyl pyrophosphate synthetase [Haemophilus influenzae
22.1-21]
gi|144979923|gb|EDJ89582.1| undecaprenyl pyrophosphate synthetase [Haemophilus influenzae
22.1-21]
Length = 53
Score = 42.7 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Query: 47 VAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKV 100
+A A ++G+K LT++AFS NW RP EIS L+ L L + KN IK+
Sbjct: 1 MAYARQIGVKVLTLYAFSSENWSRPEQEISALMSLFMQALDREV----KNYIKI 50
>gi|169838901|ref|ZP_02872089.1| Undecaprenyl pyrophosphate synthetase [candidate division TM7
single-cell isolate TM7a]
Length = 43
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 25/41 (60%)
Query: 202 VAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+AYSEF +WPDF A+ +N RDRR+GGL+ K
Sbjct: 3 IAYSEFYITDVFWPDFDENELDKAILSFNKRDRRYGGLNVK 43
>gi|196006097|ref|XP_002112915.1| hypothetical protein TRIADDRAFT_56532 [Trichoplax adhaerens]
gi|190584956|gb|EDV25025.1| hypothetical protein TRIADDRAFT_56532 [Trichoplax adhaerens]
Length = 224
Score = 42.0 bits (97), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 4/103 (3%)
Query: 137 NYSSRDEISRAIKNIFQD--IESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRL 194
N R +I A + + D +V ++D + + T PDP+L+I+ G +
Sbjct: 123 NSDGRQDIVTAAQKLCSDSNFYHATVTDQEIDR-VTSTLHATHGFPDPELVIKFGDIDSM 181
Query: 195 SDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
FL WQ+ +E + +W + LF + + Y+ +RFG
Sbjct: 182 LGFLPWQIRLTEITSLLSHW-NLPYSLFLNVIRDYSNCQQRFG 223
>gi|260204316|ref|ZP_05771807.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis K85]
gi|289573731|ref|ZP_06453958.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|289538162|gb|EFD42740.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
Length = 222
Score = 42.0 bits (97), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Query: 52 EVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDD 111
E GI+ T++ S N +R E++ L+++I +++ N+ VR +G+ + +
Sbjct: 7 EAGIELATVYLLSTENLQRDPDELAALIEIITDVVEE--ICAPANHWSVRTVGDLGLIGE 64
Query: 112 DILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD 154
+ L+ A + T ++ +A Y R EI A++ +F+
Sbjct: 65 EPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALFEQ 107
>gi|332374598|gb|AEE62440.1| unknown [Dendroctonus ponderosae]
Length = 263
Score = 41.6 bits (96), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT 176
LK + +++ ++L I + R I R +++ QD ++G +D L A++
Sbjct: 147 LKPLAENGKVHVTIHLRIISPQNGRQSIVRLAQDLCQDAQAGEWTIESLDQKLRAEF--- 203
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFI 210
+ PDPDL + G L + WQ+ +EF+ I
Sbjct: 204 -EFPDPDLGLSCGNFLSLLHYPPWQIRVTEFLSI 236
>gi|170595985|ref|XP_001902594.1| hypothetical protein [Brugia malayi]
gi|158589640|gb|EDP28556.1| conserved hypothetical protein [Brugia malayi]
Length = 235
Score = 41.6 bits (96), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 38/68 (55%)
Query: 170 IAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQY 229
I++YL + +PD +++ G ++D+ W + +E + + +FS + F L++Y
Sbjct: 167 ISEYLAREHIWEPDFLLQIGNLGTMADYSPWVLRITEILQLKSLPSNFSYQQFLSYLHEY 226
Query: 230 NLRDRRFG 237
+ RDRR G
Sbjct: 227 SSRDRRIG 234
>gi|62859459|ref|NP_001016090.1| nuclear undecaprenyl pyrophosphate synthase 1 homolog [Xenopus
(Silurana) tropicalis]
Length = 218
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 6/118 (5%)
Query: 125 RLNTGLNLFIAFNYSSRD----EISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV- 179
R++ GL +F + + +I +A +N Q + ++D + + L T+
Sbjct: 101 RVDRGLTHMPSFKVLAPEDGKMQIVKAAQNFCQLVAQEQRKPIEMDVNALDSLLRTTQTF 160
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDPDLI++ G FL W + SE + +P + + E F+ L+ Y ++R G
Sbjct: 161 PDPDLILKFGSVDSTLGFLPWHIRLSEIISLPSH-VNMRYEDFYSVLSCYAACEQRLG 217
>gi|322781596|gb|EFZ10255.1| hypothetical protein SINV_16122 [Solenopsis invicta]
Length = 127
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 16/79 (20%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
HI I+DGN R+A ++I A + IK +T++AFSI+N+ R
Sbjct: 30 KHIAFILDGNRRYAKK----------------HKITKKAQQGVIKEVTVYAFSIHNFNRS 73
Query: 72 VSEISELVKLIKSFLKKGF 90
+I +K+ K+ L+ +
Sbjct: 74 KKKIKNHMKIYKNILENTY 92
>gi|111305738|gb|AAI21527.1| hypothetical protein LOC548844 [Xenopus (Silurana) tropicalis]
Length = 218
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 6/118 (5%)
Query: 125 RLNTGLNLFIAFNYSSRD----EISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV- 179
R++ GL +F + + +I +A +N Q + ++D + + L T+
Sbjct: 101 RVDRGLTHMPSFKVLAPEDGKMQIVKAAQNFCQLVAQEQRKPIEMDVNALDSLLRTTQTF 160
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDPDLI++ G FL W + SE + +P + + E F+ L+ Y ++R G
Sbjct: 161 PDPDLILKFGSVDSTLGFLPWHIRLSEIISLPSH-VNMRYEDFYSVLSCYAACEQRLG 217
>gi|302822396|ref|XP_002992856.1| hypothetical protein SELMODRAFT_136096 [Selaginella moellendorffii]
gi|300139304|gb|EFJ06047.1| hypothetical protein SELMODRAFT_136096 [Selaginella moellendorffii]
Length = 53
Score = 40.8 bits (94), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%)
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
GE+RLS+F++ +++ VF + WPDF E + AL ++ +RRFG
Sbjct: 2 GEQRLSNFIVNNFIFTKLVFDRKLWPDFREEDYVRALVEFQGGNRRFG 49
>gi|324521907|gb|ADY47952.1| Nogo-B receptor [Ascaris suum]
Length = 235
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/120 (20%), Positives = 61/120 (50%), Gaps = 5/120 (4%)
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+ AED + ++ L + + + + I + + + + + S+ + ++ +SL L+T
Sbjct: 120 ETAEDLEKASSALIVNLLGKDAGKRAIVKVCRKLCANGDPSSINAQNITASL---ALET- 175
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+ +P+L+++ G + + + W + +E + + SR+ L+Q+N R+RRFG
Sbjct: 176 -ISEPELLLKVGQVESMCGYPPWSLRVTEILPLRRLDGHLSRQHLISFLDQFNRRERRFG 234
>gi|213402121|ref|XP_002171833.1| di-trans,poly-cis-decaprenylcistransferase [Schizosaccharomyces
japonicus yFS275]
gi|211999880|gb|EEB05540.1| di-trans,poly-cis-decaprenylcistransferase [Schizosaccharomyces
japonicus yFS275]
Length = 264
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 87/227 (38%), Gaps = 23/227 (10%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +I+D + G ++ E+ A GI LT++ +
Sbjct: 60 PKHIAVIVDYSEE----------GGIEALVDSVCELSAWCLCSGIYELTVYEKNGYLKEH 109
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P + L K I+S L F L+ N + + S + + DQT L
Sbjct: 110 PTA----LQKAIESHLPYYFGELRINV----NVSSPCSPEASAASTTESHSDQT----SL 157
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL + RD I + + + S V+ LI K L S +P+PDL+I
Sbjct: 158 NLRLIAREDGRDAIIDLARGLVDLSVKHVITSTQVNMELIDKELSESVIPEPDLLIVFSK 217
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+ RL F W + E ++ E + +F AL Y+ + R G
Sbjct: 218 KFRLQGFPPWHLRLCE-IYYDESLRGVNYLTYFKALIHYSDAEMRLG 263
>gi|156537017|ref|XP_001608303.1| PREDICTED: similar to ENSANGP00000028832 [Nasonia vitripennis]
Length = 277
Score = 40.4 bits (93), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 163 HDVDSSLIAKYLDTS-DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSREL 221
HDV S L+ + L+ VPDPDL I G FL WQ +EF IP + D S +
Sbjct: 202 HDVTSELLDEKLNFGMGVPDPDLAIVFGKTMCTYGFLPWQTRVTEFFTIPSH-RDISYKD 260
Query: 222 FFHALNQYNLRDRRFG 237
F + +++ +R+G
Sbjct: 261 FVDTIIRFSECQQRYG 276
>gi|322692317|gb|EFY84240.1| di-trans, poly-cis-decaprenylcistransferase [Metarhizium acridum
CQMa 102]
Length = 153
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 4/108 (3%)
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L++ RD ++ + + +G V DV LI K L+ + +P+PDL+I GG
Sbjct: 47 KLYLIAGEDGRDTVAELTCAWAKKVYAGEVDMDDVSMQLIQKELEETIMPNPDLLIVFGG 106
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQY---NLRDRR 235
L + WQ +E + + F ++F +AL Y +RD +
Sbjct: 107 HIDLCGYPPWQSRSAELSCMRDNG-RFRYKVFLNALKAYAGAEMRDTK 153
>gi|256077806|ref|XP_002575191.1| hypothetical protein [Schistosoma mansoni]
gi|238660422|emb|CAZ31424.1| expressed protein [Schistosoma mansoni]
Length = 233
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 79/188 (42%), Gaps = 33/188 (17%)
Query: 30 LPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSE----ISELVKLIKSF 85
LP+ H + +F EI +A I NL I+ +I +S+ I L ++ F
Sbjct: 47 LPKIPQHISFV-IFEEIFSAQ---DIANLVIWCSAIGVSYLSLSDMKGNILHLRDSVEQF 102
Query: 86 LKKGFYSLKKNN-IKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEI 144
+K+ YS+KKNN IK VI + LS VL + I NY + D+
Sbjct: 103 IKEKDYSVKKNNGIKSSVIYSPLSR------VLSK--------------ITVNYLNCDD- 141
Query: 145 SRAIKNIFQDIESGSVCSHDVDSSLIAKYL-DTSDVPDPDLIIRTGGEKRLSDFLLWQVA 203
I Q S + + + + + + + VPD DL I G S L WQ
Sbjct: 142 --GFDQICQSARYLSTSTSTLTDERVNQTITELTKVPDVDLTIHCGLSSSFSGLLPWQSR 199
Query: 204 YSEFVFIP 211
+SEF+ P
Sbjct: 200 FSEFIQCP 207
>gi|169146318|emb|CAQ13477.1| novel protein (zgc:92136) [Danio rerio]
Length = 211
Score = 40.0 bits (92), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 141 RDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYL-DTSDVPDPDLIIRTGGEKRLSDFLL 199
R I +A + + + +E S D++ S++ L ++ ++PDPDL+++ G + FL
Sbjct: 131 RLSIVQAAQQLCRAVEQKEKTSKDINVSVLDSLLKESKNIPDPDLVLKFGTVQSTLGFLP 190
Query: 200 WQVAYSEFVFI 210
W + +E +++
Sbjct: 191 WHIRLTEIMYM 201
>gi|307183319|gb|EFN70188.1| Nogo-B receptor [Camponotus floridanus]
Length = 250
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+N+ + + ++ +I ++++ + + G + D+ LI++ L+ +P+PDL + G
Sbjct: 143 INVLLLSDTDNKGKIVTLVQSLTRAVSLGKLDPEDITDQLISEKLNMKGLPNPDLALIYG 202
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
L +EF+ +P Y S E F + L +Y+ +R+G
Sbjct: 203 YTCSTHGLLPLHTRTTEFLTLPLYI-SISVEDFIYLLERYSKFVQRYG 249
>gi|312066094|ref|XP_003136106.1| hypothetical protein LOAG_00518 [Loa loa]
gi|307768718|gb|EFO27952.1| hypothetical protein LOAG_00518 [Loa loa]
Length = 234
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/97 (20%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 141 RDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLW 200
R I RA + + + + ++ + L ++ + +PD +++ G + ++ + W
Sbjct: 142 RQSIVRACRKLCMECKPENITIEQISECLAEEH-----ICEPDFLLQIGNLETMAGYSPW 196
Query: 201 QVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+ +E + + +FS + F L++Y+ RDRR G
Sbjct: 197 VLRITEILQVKSLPSNFSHQQFLSYLHEYSSRDRRIG 233
>gi|291230748|ref|XP_002735327.1| PREDICTED: nuclear undecaprenyl pyrophosphate synthase 1-like
[Saccoglossus kowalevskii]
Length = 268
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 141 RDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV-PDPDLIIRTGGEKRLSDFLL 199
R +I RA K Q + +D++ +++ L +D+ PDPDLII+ G L FL
Sbjct: 171 RQDIVRAAKYFCQQVACKRRKVNDLNPTVLENDLQGNDIFPDPDLIIKFGDVDSLLGFLP 230
Query: 200 WQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+Q+ SE + + ++F L +Y +R+G
Sbjct: 231 YQIRLSE-ILCSSSHHNMDYKVFISLLYRYAGCAQRYG 267
>gi|119497971|ref|XP_001265743.1| hypothetical protein NFIA_034120 [Neosartorya fischeri NRRL 181]
gi|119413907|gb|EAW23846.1| hypothetical protein NFIA_034120 [Neosartorya fischeri NRRL 181]
Length = 110
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 19/73 (26%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I DGN R+A +R +GIK +T++AFSI N++R
Sbjct: 24 PQHVAFIKDGNRRFARSR-------------------ETGFIIGIKVITLYAFSIANFKR 64
Query: 71 PVSEISELVKLIK 83
P +I ++ L +
Sbjct: 65 PRDQIEAIMALFR 77
>gi|260943067|ref|XP_002615832.1| hypothetical protein CLUG_04714 [Clavispora lusitaniae ATCC
42720]
gi|238851122|gb|EEQ40586.1| hypothetical protein CLUG_04714 [Clavispora lusitaniae ATCC
42720]
Length = 83
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 1 MVASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEI 46
++ ++SS P P H+G+IMDGN R+A RG+ GH G + +
Sbjct: 30 IMMDVLSSGPVPGHLGLIMDGNRRFAKKRGVDSKQGHTAGADSLTSV 76
>gi|302760249|ref|XP_002963547.1| hypothetical protein SELMODRAFT_404826 [Selaginella moellendorffii]
gi|300168815|gb|EFJ35418.1| hypothetical protein SELMODRAFT_404826 [Selaginella moellendorffii]
Length = 575
Score = 38.9 bits (89), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 93 LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIF 152
L +N+I+ IG+ L + + EA T NTG+ +A Y ++ +A + +
Sbjct: 468 LARNDIQFHCIGDSARLPRPLQAKISEA---TSGNTGMKFVMAIGYGGHSDLVQACQALA 524
Query: 153 QDIESGSVCSHDVDSSLIAKYL 174
+++E G++ ++D +A+ L
Sbjct: 525 REVEQGTMAVEEIDQINLARRL 546
>gi|296413656|ref|XP_002836525.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630352|emb|CAZ80716.1| unnamed protein product [Tuber melanosporum]
Length = 324
Score = 38.9 bits (89), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 92/235 (39%), Gaps = 43/235 (18%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ ++++ RG G I+ +EI A GIK L+++
Sbjct: 124 PEHVSVVLEYE------RG-----GLDTLIDEVSEISCWCASAGIKTLSVY--------- 163
Query: 71 PVSEISELVKLIKSFLKKGFYSLK--------KNNIKVRVIGNRLSLDDDILCVLKEAED 122
E ++KS++ S+ K+ +RV LS L E +
Sbjct: 164 ------EQTGILKSYISTSHRSISQRLHSYFGKSRPSIRVHAPPLS-------SLHEPGE 210
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
+ R L + + R+ + K + + G + S DV LI + + + +P
Sbjct: 211 EGR-EVDLEVILISEEDGRESLVDLTKTLCDMAQRGKISSEDVSVELIDAEVTENTISEP 269
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+I L + WQ+ +E +F + ++F AL+++ + RFG
Sbjct: 270 DLLILFSPSVVLRGYPPWQIRLTE-IFHVQDNSGVGYQVFLRALHRFAKTEMRFG 323
>gi|227874986|ref|ZP_03993135.1| hypothetical protein HMPREF0577_0436 [Mobiluncus mulieris ATCC
35243]
gi|227844435|gb|EEJ54595.1| hypothetical protein HMPREF0577_0436 [Mobiluncus mulieris ATCC
35243]
Length = 82
Score = 38.9 bits (89), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 20/32 (62%)
Query: 14 IGIIMDGNGRWAAARGLPRCAGHRKGIEVFNE 45
+ IIMDGNGRWA A+GL R AG G E
Sbjct: 1 MAIIMDGNGRWANAQGLNRTAGREAGEYALTE 32
>gi|260808672|ref|XP_002599131.1| hypothetical protein BRAFLDRAFT_81798 [Branchiostoma floridae]
gi|229284407|gb|EEN55143.1| hypothetical protein BRAFLDRAFT_81798 [Branchiostoma floridae]
Length = 251
Score = 38.9 bits (89), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Query: 141 RDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD-TSDVPDPDLIIRTGGEKRLSDFLL 199
R ++ +A + Q +E+ D++ + + L T PD DL+++ G L FL
Sbjct: 154 RTDLLQAAQRWCQAVEARRKKVGDLEPTALEGLLQATKGAPDVDLVLKFGTVDSLLGFLP 213
Query: 200 WQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
WQ+ +E + +P + + F AL + ++RFG
Sbjct: 214 WQIRLTEILSLPTH-HSIDYQTFLLALQSFGNIEQRFG 250
>gi|3242703|gb|AAC23755.1| hypothetical protein [Arabidopsis thaliana]
Length = 121
Score = 38.5 bits (88), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
P H+ I+DGN RWA GL GH G + EI E K + +
Sbjct: 37 PRHVSFILDGNRRWAKRDGLTTAQGHEAGTKRIIEIAERIGEETRKEVRV 86
>gi|254550081|ref|ZP_05140528.1| hypothetical protein Mtube_06424 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
Length = 110
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 170 IAKYLDTSDVPDPDLIIRTGGEKRLS 195
I + L+TS PDPDL+IRT GE+RLS
Sbjct: 25 ICENLNTSGQPDPDLVIRTSGEQRLS 50
>gi|15840524|ref|NP_335561.1| hypothetical protein MT1118.2 [Mycobacterium tuberculosis CDC1551]
gi|31792279|ref|NP_854772.1| hypothetical protein Mb1116A [Mycobacterium bovis AF2122/97]
gi|57116822|ref|YP_177637.1| hypothetical protein Rv1087A [Mycobacterium tuberculosis H37Rv]
gi|121637017|ref|YP_977240.1| hypothetical protein BCG_1146 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148660873|ref|YP_001282396.1| hypothetical protein MRA_1098 [Mycobacterium tuberculosis H37Ra]
gi|148822297|ref|YP_001287051.1| hypothetical protein TBFG_11106 [Mycobacterium tuberculosis F11]
gi|224989490|ref|YP_002644177.1| hypothetical protein JTY_1119 [Mycobacterium bovis BCG str. Tokyo
172]
gi|253799876|ref|YP_003032877.1| hypothetical protein TBMG_02899 [Mycobacterium tuberculosis KZN
1435]
gi|254363995|ref|ZP_04980041.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
Haarlem]
gi|260186010|ref|ZP_05763484.1| hypothetical protein MtubCP_08288 [Mycobacterium tuberculosis
CPHL_A]
gi|260200123|ref|ZP_05767614.1| hypothetical protein MtubT4_08353 [Mycobacterium tuberculosis T46]
gi|260204319|ref|ZP_05771810.1| hypothetical protein MtubK8_08433 [Mycobacterium tuberculosis K85]
gi|289442515|ref|ZP_06432259.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289446675|ref|ZP_06436419.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
gi|289555129|ref|ZP_06444339.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605]
gi|289569076|ref|ZP_06449303.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289573733|ref|ZP_06453960.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|289744828|ref|ZP_06504206.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289749621|ref|ZP_06508999.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289753150|ref|ZP_06512528.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|294992927|ref|ZP_06798618.1| hypothetical protein Mtub2_00070 [Mycobacterium tuberculosis 210]
gi|297633623|ref|ZP_06951403.1| hypothetical protein MtubK4_05859 [Mycobacterium tuberculosis KZN
4207]
gi|297730609|ref|ZP_06959727.1| hypothetical protein MtubKR_05944 [Mycobacterium tuberculosis KZN
R506]
gi|313657937|ref|ZP_07814817.1| hypothetical protein MtubKV_05939 [Mycobacterium tuberculosis KZN
V2475]
gi|13880700|gb|AAK45375.1| hypothetical protein MT1118.2 [Mycobacterium tuberculosis CDC1551]
gi|31617867|emb|CAD93977.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
gi|41353644|emb|CAE55355.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
gi|121492664|emb|CAL71133.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|134149509|gb|EBA41554.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
Haarlem]
gi|148505025|gb|ABQ72834.1| hypothetical protein MRA_1098 [Mycobacterium tuberculosis H37Ra]
gi|148720824|gb|ABR05449.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
gi|224772603|dbj|BAH25409.1| hypothetical protein JTY_1119 [Mycobacterium bovis BCG str. Tokyo
172]
gi|253321379|gb|ACT25982.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
1435]
gi|289415434|gb|EFD12674.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289419633|gb|EFD16834.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
gi|289439761|gb|EFD22254.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605]
gi|289538164|gb|EFD42742.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|289542830|gb|EFD46478.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289685356|gb|EFD52844.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289690208|gb|EFD57637.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289693737|gb|EFD61166.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|326904687|gb|EGE51620.1| hypothetical protein TBPG_02596 [Mycobacterium tuberculosis W-148]
gi|328459621|gb|AEB05044.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
4207]
Length = 106
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 170 IAKYLDTSDVPDPDLIIRTGGEKRLS 195
I + L+TS PDPDL+IRT GE+RLS
Sbjct: 21 ICENLNTSGQPDPDLVIRTSGEQRLS 46
>gi|320169506|gb|EFW46405.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 421
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIP--EYWPDFSRELFFHALNQYNLR 232
D +P+P+L+ + G L +L W + +E I EYW + +F H L+ Y+
Sbjct: 359 DMIPLPEPELLFQIGRTHSLVGYLPWHIRVTEIFHIRDLEYW---NYAMFIHLLHLYSKC 415
Query: 233 DRRFG 237
++R+G
Sbjct: 416 EQRYG 420
>gi|288801828|ref|ZP_06407270.1| beta-ketoacyl-acyl-carrier-protein synthase II [Prevotella
melaninogenica D18]
gi|302344777|ref|YP_003813130.1| beta-ketoacyl-acyl-carrier-protein synthase II [Prevotella
melaninogenica ATCC 25845]
gi|288335870|gb|EFC74303.1| beta-ketoacyl-acyl-carrier-protein synthase II [Prevotella
melaninogenica D18]
gi|302149193|gb|ADK95455.1| beta-ketoacyl-acyl-carrier-protein synthase II [Prevotella
melaninogenica ATCC 25845]
Length = 420
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 61/148 (41%), Gaps = 16/148 (10%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
M G G A A + A H +G+ + AA + G+K I +++ PV +ISE
Sbjct: 260 MVGEGESADAHHI--TASHPEGLGAKLVMKAALEDAGLKPEDIDYINVHGTSTPVGDISE 317
Query: 78 LVKLIKSFLKKGFYSLKKNNIK------------VRVIGNRLSLDDDIL-CVLKEAEDQT 124
K IK+ Y L ++ K V + +S+ +DI+ + ED
Sbjct: 318 -AKAIKALFGDAAYKLNISSTKSMTGHLLGAAGAVEALACVMSVKEDIVPPTINHEEDDK 376
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIF 152
NL FN + + E+ A+ N F
Sbjct: 377 DPELDYNLNFTFNKAQKREVRAALSNTF 404
>gi|167966604|ref|ZP_02548881.1| hypothetical protein MtubH3_00439 [Mycobacterium tuberculosis
H37Ra]
Length = 109
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 170 IAKYLDTSDVPDPDLIIRTGGEKRLS 195
I + L+TS PDPDL+IRT GE+RLS
Sbjct: 18 ICENLNTSGQPDPDLVIRTSGEQRLS 43
>gi|215402913|ref|ZP_03415094.1| hypothetical protein Mtub0_04311 [Mycobacterium tuberculosis
02_1987]
gi|215410701|ref|ZP_03419509.1| hypothetical protein Mtub9_05110 [Mycobacterium tuberculosis
94_M4241A]
gi|215410704|ref|ZP_03419512.1| hypothetical protein Mtub9_05125 [Mycobacterium tuberculosis
94_M4241A]
gi|215426378|ref|ZP_03424297.1| hypothetical protein MtubT9_08327 [Mycobacterium tuberculosis T92]
gi|215429955|ref|ZP_03427874.1| hypothetical protein MtubE_04573 [Mycobacterium tuberculosis
EAS054]
gi|215445248|ref|ZP_03432000.1| hypothetical protein MtubT_04638 [Mycobacterium tuberculosis T85]
gi|219556966|ref|ZP_03536042.1| hypothetical protein MtubT1_06555 [Mycobacterium tuberculosis T17]
gi|254231368|ref|ZP_04924695.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|289757174|ref|ZP_06516552.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|308231729|ref|ZP_07413574.2| hypothetical protein TMAG_03906 [Mycobacterium tuberculosis
SUMu001]
gi|308370068|ref|ZP_07420184.2| hypothetical protein TMBG_01521 [Mycobacterium tuberculosis
SUMu002]
gi|308370610|ref|ZP_07422116.2| hypothetical protein TMCG_00710 [Mycobacterium tuberculosis
SUMu003]
gi|308371857|ref|ZP_07426475.2| hypothetical protein TMDG_03909 [Mycobacterium tuberculosis
SUMu004]
gi|308373030|ref|ZP_07430787.2| hypothetical protein TMEG_00981 [Mycobacterium tuberculosis
SUMu005]
gi|308374200|ref|ZP_07435183.2| hypothetical protein TMFG_02912 [Mycobacterium tuberculosis
SUMu006]
gi|308375351|ref|ZP_07443619.2| hypothetical protein TMGG_03169 [Mycobacterium tuberculosis
SUMu007]
gi|308376614|ref|ZP_07439436.2| hypothetical protein TMHG_00265 [Mycobacterium tuberculosis
SUMu008]
gi|308377616|ref|ZP_07479814.2| hypothetical protein TMIG_03836 [Mycobacterium tuberculosis
SUMu009]
gi|308378824|ref|ZP_07484001.2| hypothetical protein TMJG_02768 [Mycobacterium tuberculosis
SUMu010]
gi|308379966|ref|ZP_07488239.2| hypothetical protein TMKG_01584 [Mycobacterium tuberculosis
SUMu011]
gi|308398601|ref|ZP_07492745.2| hypothetical protein TMLG_03966 [Mycobacterium tuberculosis
SUMu012]
gi|124600427|gb|EAY59437.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|289712738|gb|EFD76750.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|308216236|gb|EFO75635.1| hypothetical protein TMAG_03906 [Mycobacterium tuberculosis
SUMu001]
gi|308325422|gb|EFP14273.1| hypothetical protein TMBG_01521 [Mycobacterium tuberculosis
SUMu002]
gi|308331427|gb|EFP20278.1| hypothetical protein TMCG_00710 [Mycobacterium tuberculosis
SUMu003]
gi|308335239|gb|EFP24090.1| hypothetical protein TMDG_03909 [Mycobacterium tuberculosis
SUMu004]
gi|308339043|gb|EFP27894.1| hypothetical protein TMEG_00981 [Mycobacterium tuberculosis
SUMu005]
gi|308342721|gb|EFP31572.1| hypothetical protein TMFG_02912 [Mycobacterium tuberculosis
SUMu006]
gi|308346598|gb|EFP35449.1| hypothetical protein TMGG_03169 [Mycobacterium tuberculosis
SUMu007]
gi|308350520|gb|EFP39371.1| hypothetical protein TMHG_00265 [Mycobacterium tuberculosis
SUMu008]
gi|308355168|gb|EFP44019.1| hypothetical protein TMIG_03836 [Mycobacterium tuberculosis
SUMu009]
gi|308359122|gb|EFP47973.1| hypothetical protein TMJG_02768 [Mycobacterium tuberculosis
SUMu010]
gi|308363041|gb|EFP51892.1| hypothetical protein TMKG_01584 [Mycobacterium tuberculosis
SUMu011]
gi|308366691|gb|EFP55542.1| hypothetical protein TMLG_03966 [Mycobacterium tuberculosis
SUMu012]
gi|323720448|gb|EGB29536.1| hypothetical protein TMMG_03088 [Mycobacterium tuberculosis
CDC1551A]
Length = 103
Score = 38.1 bits (87), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 170 IAKYLDTSDVPDPDLIIRTGGEKRLS 195
I + L+TS PDPDL+IRT GE+RLS
Sbjct: 18 ICENLNTSGQPDPDLVIRTSGEQRLS 43
>gi|46108748|ref|XP_381432.1| hypothetical protein FG01256.1 [Gibberella zeae PH-1]
Length = 326
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 1/108 (0%)
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L + RD + + + + + G + D+ + LI L + +PDL++ G
Sbjct: 219 LRLHLISEQDGRDSMVDLTRTLAEMSQRGKLSPRDISTELIDAELSEGIMAEPDLLLTFG 278
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
LS + WQ+ +E +F + E+F AL Y R G
Sbjct: 279 PYLELSGYPPWQIRLTE-IFCLQDNERVGYEVFLKALQHYGRAQMRHG 325
>gi|169835794|ref|ZP_02868982.1| hypothetical protein cdivTM_01531 [candidate division TM7
single-cell isolate TM7a]
Length = 60
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQ 228
+LW+ AYSEF+FI + WPD ++E + LN
Sbjct: 1 MLWRAAYSEFMFIDKPWPDMTKEDVYLILNN 31
>gi|312215630|emb|CBX95582.1| similar to di-trans,poly-cis-decaprenylcistransferase
[Leptosphaeria maculans]
Length = 350
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 97/242 (40%), Gaps = 37/242 (15%)
Query: 11 PDHIGIIM-----DGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS- 64
P H+ +I+ DG+ A GL + EI A A GI L+++ +
Sbjct: 130 PKHLSVIVEYQEDDGSQGTAGLEGL---------VNDVCEIAAWTASAGIPFLSVYERTG 180
Query: 65 -INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
+ N+ P + S I S L+ F +K ++ +R LS L+ AE
Sbjct: 181 VLKNYL-PQTHAS-----IWSTLEAYFGPQRKPSLSLR--APHLSSYSPPNTPLQNAE-- 230
Query: 124 TRLNTG--------LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD 175
LN G L + + + RD I + + + + G V ++S LI L+
Sbjct: 231 --LNEGAPKEERQHLTVLLLSEHDGRDTIVDLTRTLAEMAQKGDVQQEQINSDLIDAQLN 288
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
+PDL++ +L + WQ+ +E +P+ + ++F AL + + R
Sbjct: 289 DHVSSEPDLLVLFSPTVQLKGYPPWQLRLTEIFHLPDN-KGVNYQVFLRALYNFAKVEMR 347
Query: 236 FG 237
G
Sbjct: 348 LG 349
>gi|154342524|ref|XP_001567210.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134064539|emb|CAM42634.1| hypothetical protein, unknown function [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 812
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 28/56 (50%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNL 58
A + SS P D + +DGNG WAA+ G P A R N+ A A+ +N+
Sbjct: 668 ADVASSEPEDMVRPDLDGNGVWAASHGYPAVAPPRTTAAAGNDACATRAQKRQRNI 723
>gi|239943926|ref|ZP_04695863.1| putative undecaprenyl diphosphate synthase [Streptomyces
roseosporus NRRL 15998]
gi|239990380|ref|ZP_04711044.1| putative undecaprenyl diphosphate synthase [Streptomyces
roseosporus NRRL 11379]
gi|291447390|ref|ZP_06586780.1| predicted protein [Streptomyces roseosporus NRRL 15998]
gi|291350337|gb|EFE77241.1| predicted protein [Streptomyces roseosporus NRRL 15998]
Length = 75
Score = 37.7 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Query: 198 LLWQVAYSEFVFIPEYWP-----DFSRELFFHALNQYNLRDRRFGG 238
+LWQ A+SE+ F +WP DF R L Y R RR+G
Sbjct: 1 MLWQSAHSEYCFCEVFWPASRKVDFLRACGPAGLRDYAARHRRYGA 46
>gi|310793946|gb|EFQ29407.1| Di-trans,poly-cis-decaprenylcistransferase [Glomerella graminicola
M1.001]
Length = 328
Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 87/223 (39%), Gaps = 25/223 (11%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +I L R G R G E+ +VA AAE+ + + + + R
Sbjct: 118 PKHLSVI------------LKREEGGRHGAEL-ERLVAEAAEIAVWCVCAKIPVLTVYER 164
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE----DQTRL 126
L L +S ++K ++ + V + DD+L + D L
Sbjct: 165 TGLLKHYLPHLQQSIIQKSRSYFGRHQPSLTVA---MPHSDDVLESPAHGDFVRDDPRHL 221
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
LFI+ RD + + + + + G + D+ + LI L +P+PDL+I
Sbjct: 222 KV---LFISAE-DGRDSMVDLTRTLTEMSQKGKLHPGDISTDLIDAELSEGIMPEPDLLI 277
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQY 229
G L + W + +E +P+ ++F ALN +
Sbjct: 278 SFGPYVDLDGYPPWPIRLTEIFCLPDNQ-GVGYQVFLRALNNF 319
>gi|302925552|ref|XP_003054118.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735059|gb|EEU48405.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 327
Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 46/111 (41%), Gaps = 1/111 (0%)
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
+ L L + R+ + + + + + G + D+ LI L +P+PDL+I
Sbjct: 217 KSHLRLHLISQQDGRESMVDLTRTLAEMSQKGKLSPRDISMELIDAELSEGIMPEPDLLI 276
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
G LS + WQ+ +E +F + ++F AL Y R G
Sbjct: 277 TFGPYLELSGYPPWQIRLTE-IFCLQDNERVGYQVFLKALQHYGGAQMRRG 326
>gi|56206247|emb|CAI21499.1| dehydrodolichyl diphosphate synthase [Homo sapiens]
Length = 73
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 3 ASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVA 48
A+++ + P P HI IMDGN R+A + R GH +G E++A
Sbjct: 17 ANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAELLA 63
>gi|91091696|ref|XP_972659.1| PREDICTED: similar to AGAP000402-PA [Tribolium castaneum]
gi|270001062|gb|EEZ97509.1| hypothetical protein TcasGA2_TC011353 [Tribolium castaneum]
Length = 235
Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 174 LDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
L + PDPDL + G L + WQ+ +EF+ + + + + E F H L ++N +
Sbjct: 172 LKQFEFPDPDLGVCCGKTFSLYGYPPWQIRVTEFLTLQTH-HNITLETFIHLLYRFNKCE 230
Query: 234 RRFG 237
+R+G
Sbjct: 231 QRYG 234
>gi|167966576|ref|ZP_02548853.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis H37Ra]
Length = 109
Score = 37.4 bits (85), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI ++ DGN RWA + G + G+R G E++ E GI+ T++ S R
Sbjct: 32 PRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWCHEAGIELATVYLLST---R 88
Query: 70 RPVS 73
+P +
Sbjct: 89 KPAA 92
>gi|55378478|ref|YP_136328.1| hypothetical protein rrnAC1717 [Haloarcula marismortui ATCC 43049]
gi|55231203|gb|AAV46622.1| unknown [Haloarcula marismortui ATCC 43049]
Length = 41
Score = 37.4 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 20/40 (50%)
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
++WQ YSE F W +F + AL Y R RRFG
Sbjct: 1 MIWQSVYSELYFTDVNWQNFRLRDYLRALRDYQERQRRFG 40
>gi|322701570|gb|EFY93319.1| di-trans, poly-cis-decaprenylcistransferase [Metarhizium acridum
CQMa 102]
Length = 253
Score = 37.4 bits (85), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 1/108 (0%)
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L + R+ I + + + + G + D+ L+ L +P+PDL+I
Sbjct: 146 LKLHLISTQDGRESIVDLTRTLAEMSQRGKISPRDISMELVDAELSEGIMPEPDLLILFS 205
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
LS + WQ+ +E +F + F ++F AL ++ R G
Sbjct: 206 PNVELSGYPPWQIRLTE-IFCLQDNEGFGYQVFLKALRKFAKAQMRNG 252
>gi|157167417|ref|XP_001653915.1| hypothetical protein AaeL_AAEL009647 [Aedes aegypti]
gi|108874239|gb|EAT38464.1| conserved hypothetical protein [Aedes aegypti]
Length = 275
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 69/159 (43%), Gaps = 11/159 (6%)
Query: 88 KGFYSLKKNNIKVRVIGNR--LSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEIS 145
+GF LK+N ++ R + D I+ + + L G + + + S ++
Sbjct: 118 RGF--LKRNAYLIKNFAERQPFAKTDQIVWTHQLKKGTVPLRNGYHRQVVVSCFSPEDGK 175
Query: 146 RAI----KNIFQDIESGSVCS-HDVDSSLIAKYLDTS--DVPDPDLIIRTGGEKRLSDFL 198
R++ + I + +GSV S D+ + L+ + L +PDP+L + G L
Sbjct: 176 RSVVKTARAISDQLTTGSVASPSDITAELVDQRLQDQFHHIPDPELAVYFGSVCSTYGML 235
Query: 199 LWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
WQ+ +EF+ + D F L ++ ++RFG
Sbjct: 236 PWQIRLTEFLPLGARMQDVEPSHFVSCLYRFAKCEQRFG 274
>gi|149001625|ref|ZP_01826598.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
SP14-BS69]
gi|147760083|gb|EDK67072.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
SP14-BS69]
Length = 54
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 14/15 (93%), Positives = 14/15 (93%)
Query: 11 PDHIGIIMDGNGRWA 25
P HIGIIMDGNGRWA
Sbjct: 20 PAHIGIIMDGNGRWA 34
>gi|50310593|ref|XP_455316.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644452|emb|CAG98024.1| KLLA0F05203p [Kluyveromyces lactis]
Length = 333
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 83/225 (36%), Gaps = 21/225 (9%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P + I++ GLP I +++V GIK+L ++ + ++
Sbjct: 115 PKRLAAILESKPEGDIGGGLPGL------INDASDVVCWTVSAGIKHLILYDYD-GKMKQ 167
Query: 71 PVSEISELV--KLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
V E+ + KL K F G ++ K IK+ D+ L + T+
Sbjct: 168 NVHELRAGIHHKLAKYF---GLDNVPKFAIKIPHTNQIFFDKDEDQKDLSPEKSTTKHKV 224
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+ + + RD I K + G + DVD+ L+ + L +PDL++
Sbjct: 225 AVEISLLSKVDGRDTILELTKTMADLCAKGQLKVEDVDTKLVNQELTQLVGHEPDLLLFF 284
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWP----DFSRELFFHALNQY 229
G L F W + +E YW S +F L QY
Sbjct: 285 GPALDLQGFPPWHIRLTEL-----YWETDNDQVSYYVFIRGLKQY 324
>gi|332146760|dbj|BAK19924.1| 1-aminocyclopropane-1-carboxylate synthase [Dianthus petraeus]
Length = 506
Score = 37.0 bits (84), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 18/143 (12%)
Query: 83 KSFLKKGFYSLKKNN--IKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSS 140
K++ + ++S K +N I++ + N+L D +LK + N G+N F+
Sbjct: 33 KAYDRDPYHSTKNSNGVIQMGLAENQLCFDLVTEWLLKNPQASICTNEGVNKFMDIA--- 89
Query: 141 RDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLW 200
IFQD G + + K D + +PD I+ +GG S+ LL+
Sbjct: 90 ----------IFQDYH-GLPEFRSAVAKFMGKARDEKVIFNPDRIVMSGGATGASETLLF 138
Query: 201 QVAYS--EFVFIPEYWPDFSREL 221
+A F+ Y+P FSR+L
Sbjct: 139 CLANPGDAFLIPSPYYPAFSRDL 161
>gi|190345789|gb|EDK37733.2| hypothetical protein PGUG_01831 [Meyerozyma guilliermondii ATCC
6260]
Length = 309
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 78/201 (38%), Gaps = 26/201 (12%)
Query: 43 FNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRV 102
+E+ A + G+ +LTI+ S ISELV+ + L+ F + VRV
Sbjct: 128 ISELAAWSVSAGVPHLTIYEHD----GVVKSHISELVRYVSKNLRLYFGTDSIPTFAVRV 183
Query: 103 IGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAF--NYSSRDEISRAIKNIFQDIESGSV 160
+ A L T ++L I+ + I K + + + +
Sbjct: 184 PHTNAT-----------AYSHPALGTNVDLTISVLSRVDGKPTILELTKTMSELAANKEL 232
Query: 161 CSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYW----PD 216
D+ L+ + L P+PDL+I G L +F W + +E YW D
Sbjct: 233 SIKDISVELVDEELVELVGPEPDLLICFGPSLDLQNFPPWHIRLTEI-----YWEPGNTD 287
Query: 217 FSRELFFHALNQYNLRDRRFG 237
+ +F AL QY+ + + G
Sbjct: 288 VNYAVFIAALQQYSQCEMKVG 308
>gi|29840879|gb|AAP05880.1| similar to GenBank Accession Number BC003223 unknown (protein for
MGC:7199) in Mus musculus [Schistosoma japonicum]
Length = 233
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 75/188 (39%), Gaps = 33/188 (17%)
Query: 30 LPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSE----ISELVKLIKSF 85
LP+ H + +F EI +A I NL I+ +I +S+ I L I+ F
Sbjct: 47 LPKIPQHISFV-IFEEIFSAQ---DIANLIIWCSAIGVSYLSMSDMKGNILHLRDSIEQF 102
Query: 86 LK-KGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEI 144
+K K F+ K K V+ N LS CVL + I NY D+
Sbjct: 103 VKEKNFFVEKDKTNKSSVVYNPLS------CVLSK--------------ITVNYLGCDD- 141
Query: 145 SRAIKNIFQDIESGSVCSHDVDSSLIAKYL-DTSDVPDPDLIIRTGGEKRLSDFLLWQVA 203
I Q S ++ + + + + + + VPD DL I G S L WQ
Sbjct: 142 --GFDQICQSARYLSTSNYSLTDEKVNQTINELTKVPDVDLTIHCGLCSSFSGLLPWQSR 199
Query: 204 YSEFVFIP 211
+SEF+ P
Sbjct: 200 FSEFIRCP 207
>gi|157140710|ref|XP_001647659.1| hypothetical protein AaeL_AAEL015541 [Aedes aegypti]
gi|108867010|gb|EAT32327.1| conserved hypothetical protein [Aedes aegypti]
Length = 156
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 66/154 (42%), Gaps = 9/154 (5%)
Query: 93 LKKNNIKVRVIGNR--LSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAI-- 148
LK+N ++ R + D I+ + + L G + + + S ++ R++
Sbjct: 2 LKRNAYLIKNFAERQPFAKTDQIVWTHQLKKGTVPLRNGYHRQVVVSCFSPEDGKRSVVK 61
Query: 149 --KNIFQDIESGSVCS-HDVDSSLIAKYLDTS--DVPDPDLIIRTGGEKRLSDFLLWQVA 203
+ I + +GSV S D+ + L+ + L +PDP+L + G L WQ+
Sbjct: 62 TARAISDQLTTGSVASPSDITAELVDQRLQDQFHHIPDPELAVYFGSVCSTYGMLPWQIR 121
Query: 204 YSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+EF+ + D F L ++ ++RFG
Sbjct: 122 LTEFLPLGARMQDVKPSHFVSCLYRFAKCEQRFG 155
>gi|253744885|gb|EET01022.1| BC2 protein [Giardia intestinalis ATCC 50581]
Length = 373
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 167 SSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQV 202
S AK++ S +P PD+ RT GEKR+ D LW++
Sbjct: 216 SPATAKWV-ASPLPPPDIFARTSGEKRIGDCFLWEI 250
>gi|6062592|gb|AAF02905.1|AF065605_2 BC2-ORF2/B [Giardia intestinalis]
Length = 373
Score = 36.6 bits (83), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 167 SSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQV 202
S AK++ S +P PD+ RT GEKR+ D LW++
Sbjct: 216 SPATAKWV-VSPLPPPDIFARTSGEKRIGDCFLWEI 250
>gi|209516154|ref|ZP_03265013.1| citrate lyase, alpha subunit [Burkholderia sp. H160]
gi|209503438|gb|EEA03435.1| citrate lyase, alpha subunit [Burkholderia sp. H160]
Length = 512
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 25/38 (65%)
Query: 37 RKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSE 74
R G V N+++AAAA GIKNLTI A S+ + P+ E
Sbjct: 75 RNGDGVLNQVLAAAARKGIKNLTIAASSLFSVHAPLVE 112
>gi|332146762|dbj|BAK19925.1| 1-aminocyclopropane-1-carboxylate synthase [Dianthus petraeus]
Length = 507
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 18/143 (12%)
Query: 83 KSFLKKGFYSLKKNN--IKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSS 140
K++ + ++S K +N I++ + N+L D +LK + N G+N F+
Sbjct: 33 KAYDRDPYHSTKNSNGVIQMGLAENQLCFDLVTEWLLKNPQASICTNEGVNKFMDIA--- 89
Query: 141 RDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLW 200
IFQD G + + K D + +PD I+ +GG S+ LL+
Sbjct: 90 ----------IFQDYH-GLPEFRSAVAKFMGKARDEKVIFNPDRIVMSGGATGASETLLF 138
Query: 201 QVAY-SEFVFIPE-YWPDFSREL 221
+A E IP Y+P F+R+L
Sbjct: 139 CLANPGEAFLIPSPYYPAFNRDL 161
>gi|322705651|gb|EFY97235.1| di-trans, poly-cis-decaprenylcistransferase [Metarhizium anisopliae
ARSEF 23]
Length = 327
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 1/108 (0%)
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L + R+ I + + + + G + D+ L+ L +P+PDL+I
Sbjct: 220 LKLHLISAQDGRESIVDLTRTLAEMSQRGKISPRDISMELVDAELSEGIMPEPDLLILFS 279
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
LS + WQ+ +E +F + F ++F AL ++ R G
Sbjct: 280 PNVELSGYPPWQIRLTE-IFCLQDNEGFGYQVFLKALRKFAKAQMRNG 326
>gi|171687915|ref|XP_001908898.1| hypothetical protein [Podospora anserina S mat+]
gi|170943919|emb|CAP69571.1| unnamed protein product [Podospora anserina S mat+]
Length = 358
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 44/230 (19%), Positives = 92/230 (40%), Gaps = 21/230 (9%)
Query: 11 PDHIGIIM--DGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ +I+ + GR A G K + +I A A GI L+I+
Sbjct: 146 PKHLSVILTLEDQGRSGA--------GLEKLVNEAADIAAWCASAGITQLSIYE-KTGIL 196
Query: 69 RRPVSEISELV-KLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
+ V E + + + ++++ F S+ + + +L + ++ R N
Sbjct: 197 KGYVKETHQTISQRLQTYFGPSFPSVSLGAPHIPPV------QSGLLSLSNSPNNENRKN 250
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+N+ + RD I K + + + + D+ + L+ L S + +PDL++
Sbjct: 251 --INILLISAEDGRDSIVDLTKTLAEMSQRKKLQPADITTELVDAELSESVMEEPDLLVL 308
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
L+ + WQ+ +E +P+ ++F+ AL ++ R G
Sbjct: 309 FSPFVELAGYPPWQIRLTEIFHVPDNQ-GVGYQVFYRALCKFAKAQMRMG 357
>gi|305304|gb|AAA29158.1| permease [Giardia intestinalis]
Length = 377
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 160 VCSHDVDSSLIAKYLD--TSDVPDPDLIIRTGGEKRLSDFLLWQV 202
+C D SL+ + T+ +P PD+ RT EKR+ D LW++
Sbjct: 209 ICPDQSDWSLLHPFTKCVTTPLPPPDIFARTSDEKRIGDCFLWEI 253
>gi|170103366|ref|XP_001882898.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164642269|gb|EDR06526.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 68
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPE-YWPDF 217
P D+++RT G KRLSDF+L Q + I +WPD
Sbjct: 8 PPLDILVRTSGVKRLSDFILCQCCEDTQIQISSTFWPDL 46
>gi|19113007|ref|NP_596215.1| di-trans,poly-cis-decaprenylcistransferase [Schizosaccharomyces
pombe 972h-]
gi|74639014|sp|Q9Y7K8|UPPS_SCHPO RecName: Full=Probable undecaprenyl pyrophosphate synthase;
Short=UPP synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|4539259|emb|CAB39848.1| di-trans,poly-cis-decaprenylcistransferase [Schizosaccharomyces
pombe]
Length = 258
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 82/196 (41%), Gaps = 8/196 (4%)
Query: 46 IVAAAAEVGIKNLTIFAFSINNWRRPVSEISEL-VKLIKSFLKKGFYSLKK---NNIKVR 101
I+ + GI+ L A ++ W S I EL + K FLK+ +++K +++
Sbjct: 66 IIECVEDGGIEGLIHDACELSAWCV-CSNIRELTIYERKGFLKQSPEAVEKAIYSHLPFY 124
Query: 102 VIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVC 161
+ G++ ++ C E ++ ++L + RD I + + +
Sbjct: 125 LGGDKCTVHVTNPCSPDEKNQNDCVDLKVHLIAKED--GRDAIIDLTRGLADLCTKKVIS 182
Query: 162 SHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSREL 221
S V LI K L S +P+PDL+I +L F WQ+ E P + +
Sbjct: 183 STQVTLELIDKELKESVIPEPDLLIIFAPLLKLQGFPPWQLRLCEIFHDPILYTT-NYLT 241
Query: 222 FFHALNQYNLRDRRFG 237
FF AL Y+ + R G
Sbjct: 242 FFKALVHYSNAEMRLG 257
>gi|187736197|ref|YP_001878309.1| ATP-dependent DNA helicase, RecQ family [Akkermansia muciniphila
ATCC BAA-835]
gi|187426249|gb|ACD05528.1| ATP-dependent DNA helicase, RecQ family [Akkermansia muciniphila
ATCC BAA-835]
Length = 716
Score = 36.2 bits (82), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Query: 81 LIKSFLKKGFYSLKKNNIKVRVIGNRLSL---DDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ F ++G S+ +VR GN +L D+D+ LKE ++ G+ + F+
Sbjct: 611 LVWPFARRGKISVSMEQARVRSTGNLAALGEFDEDLFLKLKELRNELAREAGIPAYAVFH 670
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD 175
S+ + ++R + G++ H + A+YLD
Sbjct: 671 NSTLEGLAR----LKPTTRRGAMNVHGIGEQKAARYLD 704
>gi|306818305|ref|ZP_07452034.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
gi|304648950|gb|EFM46246.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
Length = 82
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/21 (76%), Positives = 17/21 (80%)
Query: 16 IIMDGNGRWAAARGLPRCAGH 36
IIMDGNGRWA A+GL R AG
Sbjct: 3 IIMDGNGRWANAQGLNRTAGR 23
>gi|169334628|ref|ZP_02861821.1| hypothetical protein ANASTE_01031 [Anaerofustis stercorihominis DSM
17244]
gi|169259345|gb|EDS73311.1| hypothetical protein ANASTE_01031 [Anaerofustis stercorihominis DSM
17244]
Length = 308
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
N +P+ ELV++IK+ + K F+ + K+ K R+ ++D+I + + ED
Sbjct: 169 NREEKPIETTYELVEIIKNAIPKKFHQM-KHPAKKTFQAIRIEVNDEIDALKQSVEDMID 227
Query: 126 -LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVC 161
L+ G L + +S D R +K +F + G C
Sbjct: 228 VLDKGGRLAVITFHSLED---RIVKKVFSEYAKGCTC 261
>gi|206994194|emb|CAR79338.1| dehydrodolichyl diphosphate synthase [Oncorhynchus mykiss]
Length = 72
Score = 35.8 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 39/71 (54%)
Query: 92 SLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNI 151
+L+K+ + +RV+G+ L D+ + A TR + L + F Y+SR EI+ A++ +
Sbjct: 2 NLEKHGVCIRVLGDLTLLPLDLQQHIARAVVATRTHNKCFLNVCFAYTSRHEIANAVREM 61
Query: 152 FQDIESGSVCS 162
+E G + S
Sbjct: 62 AWGVEQGLIKS 72
>gi|189203665|ref|XP_001938168.1| di-trans,poly-cis-decaprenylcistransferase [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187985267|gb|EDU50755.1| di-trans,poly-cis-decaprenylcistransferase [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 347
Score = 35.8 bits (81), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 92/236 (38%), Gaps = 25/236 (10%)
Query: 11 PDHIGIIM-----DGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS- 64
P H+ +I+ DG+ A GL + EI A AA GI L+++ +
Sbjct: 127 PRHLSVIVEYQEDDGSQGTAGLEGL---------VNDVCEIAAWAASAGIPLLSVYERTG 177
Query: 65 -INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRV--IGNRLSLDDDILCVLKEAE 121
+ N+ P + S I + L+ F +K + +R + + + + E
Sbjct: 178 VLKNYL-PQTHAS-----IWNTLEAYFGPRRKPTLSLRAPHLSSYSPPNTPPQTATSDGE 231
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
L + + + RD I + + + + G V ++ LI L+ +
Sbjct: 232 VSKEERQHLTVLLLSEHDGRDTIVDLTRTLAEMAQKGDVREEQINMDLIDAQLNDHVSSE 291
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDL+I +L + WQ+ +E +P+ + ++F AL Y + R G
Sbjct: 292 PDLLILFSPTVQLKGYPPWQLRLTEIFHLPDN-KGVNYQVFLRALYNYAKVEMRLG 346
>gi|207111198|ref|ZP_03245360.1| hypothetical protein HpylH_19223 [Helicobacter pylori
HPKX_438_CA4C1]
Length = 61
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%)
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
RP SE+ L+K++K +LK ++ NNI+ R IG+ ++ + + E+ TR
Sbjct: 1 RPKSEVDFLMKMLKKYLKDERFTYLDNNIRFRAIGDLEGFSKELRDTILQLENDTR 56
>gi|302771307|ref|XP_002969072.1| hypothetical protein SELMODRAFT_4954 [Selaginella moellendorffii]
gi|300163577|gb|EFJ30188.1| hypothetical protein SELMODRAFT_4954 [Selaginella moellendorffii]
Length = 71
Score = 35.8 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 35/68 (51%)
Query: 99 KVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESG 158
KVR IG+ L + + EA T + GL + Y SR+++ + + I ++E G
Sbjct: 3 KVRCIGDVSLLPSSLQARIAEAHVMTSNSKGLKFILPTAYGSREDVVQDCRRIAFEVECG 62
Query: 159 SVCSHDVD 166
+V + D+D
Sbjct: 63 AVRASDID 70
>gi|18320|emb|CAA79477.1| 1-aminocyclopropane 1-carboxylate synthase [Dianthus caryophyllus]
gi|299889071|dbj|BAJ10418.1| 1-aminocyclopropane-1-carboxylate synthase [Dianthus caryophyllus]
gi|327343830|dbj|BAK09605.1| 1-aminocyclopropane-1-carboxylate synthase [Dianthus caryophyllus]
Length = 518
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 18/143 (12%)
Query: 83 KSFLKKGFYSLKKNN--IKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSS 140
K++ + ++S K +N I++ + N+L D +LK + N G+N F+
Sbjct: 33 KAYDRDPYHSTKNSNGVIQMGLAENQLCFDLVTEWLLKNPQASICTNEGVNKFMDIA--- 89
Query: 141 RDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLW 200
IFQD G + + K D + +PD I+ +GG S+ LL+
Sbjct: 90 ----------IFQDYH-GLPEFRSAVAKFMGKARDEKVIFNPDRIVMSGGATGASETLLF 138
Query: 201 QVAYS--EFVFIPEYWPDFSREL 221
+A F+ Y+P F+R+L
Sbjct: 139 CLANPGDAFLIPSPYYPAFNRDL 161
>gi|330918953|ref|XP_003298414.1| hypothetical protein PTT_09135 [Pyrenophora teres f. teres 0-1]
gi|311328387|gb|EFQ93491.1| hypothetical protein PTT_09135 [Pyrenophora teres f. teres 0-1]
Length = 347
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 92/236 (38%), Gaps = 25/236 (10%)
Query: 11 PDHIGIIM-----DGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS- 64
P H+ +I+ DG+ A GL + EI A AA GI L+++ +
Sbjct: 127 PRHLSVIVEYQEDDGSQGTAGLEGL---------VNDVCEIAAWAASAGIPLLSVYERTG 177
Query: 65 -INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRV--IGNRLSLDDDILCVLKEAE 121
+ N+ P + S I + L+ F +K + +R + + + + E
Sbjct: 178 VLKNYL-PQTHTS-----IWNTLEAYFGPRRKPTLSLRAPHLSSYSPPNTPPQTATSDGE 231
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
L + + + RD I + + + + G V ++ LI L+ +
Sbjct: 232 VSKEDRQHLTVLLLSEHDGRDTIVDLTRTLAEMAQKGDVREEQINMDLIDAQLNDHVSSE 291
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDL+I +L + WQ+ +E +P+ + ++F AL Y + R G
Sbjct: 292 PDLLILFSPTVQLKGYPPWQLRLTEIFHLPDN-KGVNYQVFLRALYNYAKVEMRLG 346
>gi|258645236|ref|ZP_05732705.1| S-adenosyl-methyltransferase MraW [Dialister invisus DSM 15470]
gi|260402586|gb|EEW96133.1| S-adenosyl-methyltransferase MraW [Dialister invisus DSM 15470]
Length = 310
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ-TRL 126
RRP+S ELV +IK+ + + K R+ +++++ + K ED L
Sbjct: 173 MRRPISTTEELVHVIKAAIPSAARRDGPHPAKRTFQAIRIEVNNELGILRKAMEDCINHL 232
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV 165
N G L + +S D I IKN F+D+ +C ++
Sbjct: 233 NKGGRLGVITFHSLEDRI---IKNTFRDMSKDCICPSEI 268
>gi|158288876|ref|XP_565967.2| AGAP000402-PA [Anopheles gambiae str. PEST]
gi|157018782|gb|EAL41212.2| AGAP000402-PA [Anopheles gambiae str. PEST]
Length = 238
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 53/125 (42%), Gaps = 6/125 (4%)
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAI----KNIFQDIESGSVCSHDVDSSLIAKYL 174
E +D R G + + S ++ + + ++I + + + + DV L+ L
Sbjct: 113 EVDDSPRQPVGSGRTVVVGFLSPEDGKQGLVSLSRSIGESVRRRDLYAADVSIELLDSRL 172
Query: 175 DTS--DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLR 232
+ VPDPDL + G L WQ+ +EF+ + D + F L++Y
Sbjct: 173 QAALGAVPDPDLALYFGDVCSTYGLLPWQIRLTEFLPLGTRLRDSTEREFVRCLHRYAKC 232
Query: 233 DRRFG 237
++R G
Sbjct: 233 EQRLG 237
>gi|299889041|dbj|BAJ10403.1| 1-aminocyclopropane-1-carboxylate synthase [Dianthus caryophyllus]
Length = 515
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 18/143 (12%)
Query: 83 KSFLKKGFYSLKKNN--IKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSS 140
K++ + ++S K +N I++ + N+L D +LK + N G+N F+
Sbjct: 30 KAYDRDPYHSTKNSNGVIQMGLAENQLCFDLVTEWLLKNPQASICTNEGVNKFMDIA--- 86
Query: 141 RDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLW 200
IFQD G + + K D + +PD I+ +GG S+ LL+
Sbjct: 87 ----------IFQDYH-GLPEFRSAVAKFMGKARDEKVIFNPDRIVMSGGATGASETLLF 135
Query: 201 QVAYS--EFVFIPEYWPDFSREL 221
+A F+ Y+P F+R+L
Sbjct: 136 CLANPGDAFLIPSPYYPAFNRDL 158
>gi|327343828|dbj|BAK09604.1| 1-aminocyclopropane-1-carboxylate synthase [Dianthus caryophyllus]
Length = 518
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 18/143 (12%)
Query: 83 KSFLKKGFYSLKKNN--IKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSS 140
K++ + ++S K +N I++ + N+L D +LK + N G+N F+
Sbjct: 33 KAYDRDPYHSTKNSNGVIQMGLAENQLCFDLVTEWLLKNPQASICTNEGVNKFMDIA--- 89
Query: 141 RDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLW 200
IFQD G + + K D + +PD I+ +GG S+ LL+
Sbjct: 90 ----------IFQDYH-GLPEFRSAVAKFMGKARDEKVIFNPDRIVMSGGATGASETLLF 138
Query: 201 QVAYS--EFVFIPEYWPDFSREL 221
+A F+ Y+P F+R+L
Sbjct: 139 CLANPGDAFLIPSPYYPAFNRDL 161
>gi|299889075|dbj|BAJ10420.1| 1-aminocyclopropane-1-carboxylate synthase [Dianthus longicalyx]
gi|299889077|dbj|BAJ10421.1| 1-aminocyclopropane-1-carboxylate synthase [Dianthus longicalyx]
Length = 504
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 18/143 (12%)
Query: 83 KSFLKKGFYSLKKNN--IKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSS 140
K++ + ++S K +N I++ + N+L D +LK + N G+N F+
Sbjct: 33 KAYDRDPYHSTKNSNGVIQMGLAENQLCFDLVTEWLLKNPQASICTNEGVNKFMDIA--- 89
Query: 141 RDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLW 200
IFQD G + + K D + +PD I+ +GG S+ LL+
Sbjct: 90 ----------IFQDYH-GLPEFRSAVAKFMGKARDEKVIFNPDRIVMSGGATGASETLLF 138
Query: 201 QVAYS--EFVFIPEYWPDFSREL 221
+A F+ Y+P F+R+L
Sbjct: 139 CLANPGDAFLIPSPYYPAFNRDL 161
>gi|299889045|dbj|BAJ10405.1| 1-aminocyclopropane-1-carboxylate synthase [Dianthus caryophyllus]
gi|299889073|dbj|BAJ10419.1| 1-aminocyclopropane-1-carboxylate synthase [Dianthus caryophyllus]
Length = 512
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 18/143 (12%)
Query: 83 KSFLKKGFYSLKKNN--IKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSS 140
K++ + ++S K +N I++ + N+L D +LK + N G+N F+
Sbjct: 33 KAYDRDPYHSTKNSNGVIQMGLAENQLCFDLVTEWLLKNPQASICTNEGVNKFMDIA--- 89
Query: 141 RDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLW 200
IFQD G + + K D + +PD I+ +GG S+ LL+
Sbjct: 90 ----------IFQDYH-GLPEFRSAVAKFMGKARDEKVIFNPDRIVMSGGATGASETLLF 138
Query: 201 QVAYS--EFVFIPEYWPDFSREL 221
+A F+ Y+P F+R+L
Sbjct: 139 CLANPGDAFLIPSPYYPAFNRDL 161
>gi|299889063|dbj|BAJ10414.1| 1-aminocyclopropane-1-carboxylate synthase [Dianthus longicalyx]
Length = 501
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 18/143 (12%)
Query: 83 KSFLKKGFYSLKKNN--IKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSS 140
K++ + ++S K +N I++ + N+L D +LK + N G+N F+
Sbjct: 30 KAYDRDPYHSTKNSNGVIQMGLAENQLCFDLVTEWLLKNPQASICTNEGVNKFMDIA--- 86
Query: 141 RDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLW 200
IFQD G + + K D + +PD I+ +GG S+ LL+
Sbjct: 87 ----------IFQDYH-GLPEFRSAVAKFMGKARDEKVIFNPDRIVMSGGATGASETLLF 135
Query: 201 QVAYS--EFVFIPEYWPDFSREL 221
+A F+ Y+P F+R+L
Sbjct: 136 CLANPGDAFLIPSPYYPAFNRDL 158
>gi|299889055|dbj|BAJ10410.1| 1-aminocyclopropane-1-carboxylate synthase [Dianthus longicalyx]
Length = 501
Score = 35.4 bits (80), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 18/143 (12%)
Query: 83 KSFLKKGFYSLKKNN--IKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSS 140
K++ + ++S K +N I++ + N+L D +LK + N G+N F+
Sbjct: 30 KAYDRDPYHSTKNSNGVIQMGLAENQLCFDLVTEWLLKNPQASICTNEGVNKFMDIA--- 86
Query: 141 RDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLW 200
IFQD G + + K D + +PD I+ +GG S+ LL+
Sbjct: 87 ----------IFQDYH-GLPEFRSAVAKFMGKARDEKVIFNPDRIVMSGGATGASETLLF 135
Query: 201 QVAYS--EFVFIPEYWPDFSREL 221
+A F+ Y+P F+R+L
Sbjct: 136 CLANPGDAFLIPSPYYPAFNRDL 158
>gi|299889067|dbj|BAJ10416.1| 1-aminocyclopropane-1-carboxylate synthase [Dianthus longicalyx]
Length = 500
Score = 35.4 bits (80), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 18/143 (12%)
Query: 83 KSFLKKGFYSLKKNN--IKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSS 140
K++ + ++S K +N I++ + N+L D +LK + N G+N F+
Sbjct: 30 KAYDRDPYHSTKNSNGVIQMGLAENQLCFDLVTEWLLKNPQASICTNEGVNKFMDIA--- 86
Query: 141 RDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLW 200
IFQD G + + K D + +PD I+ +GG S+ LL+
Sbjct: 87 ----------IFQDYH-GLPEFRSAVAKFMGKARDEKVIFNPDRIVMSGGATGASETLLF 135
Query: 201 QVAYS--EFVFIPEYWPDFSREL 221
+A F+ Y+P F+R+L
Sbjct: 136 CLANPGDAFLIPSPYYPAFNRDL 158
>gi|299889047|dbj|BAJ10406.1| 1-aminocyclopropane-1-carboxylate synthase [Dianthus longicalyx]
gi|299889051|dbj|BAJ10408.1| 1-aminocyclopropane-1-carboxylate synthase [Dianthus longicalyx]
Length = 501
Score = 35.4 bits (80), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 18/143 (12%)
Query: 83 KSFLKKGFYSLKKNN--IKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSS 140
K++ + ++S K +N I++ + N+L D +LK + N G+N F+
Sbjct: 30 KAYDRDPYHSTKNSNGVIQMGLAENQLCFDLVTEWLLKNPQASICTNEGVNKFMDIA--- 86
Query: 141 RDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLW 200
IFQD G + + K D + +PD I+ +GG S+ LL+
Sbjct: 87 ----------IFQDYH-GLPEFRSAVAKFMGKARDEKVIFNPDRIVMSGGATGASETLLF 135
Query: 201 QVAYS--EFVFIPEYWPDFSREL 221
+A F+ Y+P F+R+L
Sbjct: 136 CLANPGDAFLIPSPYYPAFNRDL 158
>gi|150866879|ref|XP_001386621.2| hypothetical protein PICST_63927 [Scheffersomyces stipitis CBS
6054]
gi|149388135|gb|ABN68592.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 354
Score = 35.4 bits (80), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 143 EISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQV 202
E+++ + + Q+ E + +D+ LI + L P+PDL+I G L D+ W +
Sbjct: 263 ELTKTMSELAQNNE---LSVNDITIDLIDEELAELVGPEPDLLISFGPSLDLQDYPPWHI 319
Query: 203 AYSEFVFIPEYWPDFSRELFFHALNQY 229
SE + PE D +F AL Q+
Sbjct: 320 RLSEIYWEPEN-KDVIYAVFIRALQQF 345
>gi|328945300|gb|EGG39453.1| DeoR family transcriptional regulator [Streptococcus sanguinis
SK1087]
Length = 247
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 75 ISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDD-DILCVLKEAEDQTRLNTG--LN 131
+ E+VKL+ F + +L + +KV + R LD + +L+ LN+G LN
Sbjct: 4 LDEIVKLVSEFERIDVNTLS-DRLKVSKVTIRKDLDKLETKGLLRREHGYAVLNSGDDLN 62
Query: 132 LFIAFNYSSRDEISRAIKNIFQD-----IESGSVCS 162
+ ++F+Y ++ I++ I QD IESGS C+
Sbjct: 63 VRLSFHYDTKRRIAQEAAKIVQDNETIMIESGSTCA 98
>gi|332023940|gb|EGI64158.1| Nogo-B receptor [Acromyrmex echinatior]
Length = 249
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 67/159 (42%), Gaps = 15/159 (9%)
Query: 85 FLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN------TGLNLFIAFNY 138
FLKK + LK+ + R D I C+ +T N + +N+ + +
Sbjct: 99 FLKKNEFILKEEFARKR--------PDLIECITWNPHAKTHQNGVIEGKSKINVSLLSDV 150
Query: 139 SSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFL 198
++ +I+ +++ + + SG++ + I + L +PDPDL + L
Sbjct: 151 DNKGKIATLTQSLAKMVSSGNLDQEKITIERITEELQIKGMPDPDLALIRDYSCSTHGVL 210
Query: 199 LWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
W +EF+ +P Y + + F L +YN +R G
Sbjct: 211 PWHTRTTEFLMLPLY-VNIPVKDFTCLLEKYNKCVQRHG 248
>gi|323353533|ref|ZP_08088066.1| DeoR family transcriptional regulator [Streptococcus sanguinis
VMC66]
gi|322121479|gb|EFX93242.1| DeoR family transcriptional regulator [Streptococcus sanguinis
VMC66]
gi|324990393|gb|EGC22331.1| DeoR family transcriptional regulator [Streptococcus sanguinis
SK353]
gi|325688592|gb|EGD30609.1| DeoR family transcriptional regulator [Streptococcus sanguinis
SK72]
gi|327459134|gb|EGF05482.1| DeoR family transcriptional regulator [Streptococcus sanguinis
SK1057]
gi|332359363|gb|EGJ37184.1| DeoR family transcriptional regulator [Streptococcus sanguinis
SK49]
Length = 247
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 75 ISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDD-DILCVLKEAEDQTRLNTG--LN 131
+ E+VKL+ F + +L + +KV + R LD + +L+ LN+G LN
Sbjct: 4 LDEIVKLVSEFERIDVNTLS-DRLKVSKVTIRKDLDKLETKGLLRREHGYAVLNSGDDLN 62
Query: 132 LFIAFNYSSRDEISRAIKNIFQD-----IESGSVCS 162
+ ++F+Y ++ I++ I QD IESGS C+
Sbjct: 63 VRLSFHYDTKRRIAQEAAKIVQDNETIMIESGSTCA 98
>gi|327472948|gb|EGF18375.1| DeoR family transcriptional regulator [Streptococcus sanguinis
SK408]
Length = 247
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 75 ISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDD-DILCVLKEAEDQTRLNTG--LN 131
+ E+VKL+ F + +L + +KV + R LD + +L+ LN+G LN
Sbjct: 4 LDEIVKLVSEFERIDVNTLS-DRLKVSKVTIRKDLDKLETKGLLRREHGYAVLNSGDDLN 62
Query: 132 LFIAFNYSSRDEISRAIKNIFQD-----IESGSVCS 162
+ ++F+Y ++ I++ I QD IESGS C+
Sbjct: 63 VRLSFHYDTKRRIAQEAAKIVQDNETIMIESGSTCA 98
>gi|325689505|gb|EGD31510.1| DeoR family transcriptional regulator [Streptococcus sanguinis
SK115]
Length = 247
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 75 ISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDD-DILCVLKEAEDQTRLNTG--LN 131
+ E+VKL+ F + +L + +KV + R LD + +L+ LN+G LN
Sbjct: 4 LDEIVKLVSEFERIDVNTLS-DRLKVSKVTIRKDLDKLETKGLLRREHGYAVLNSGDDLN 62
Query: 132 LFIAFNYSSRDEISRAIKNIFQD-----IESGSVCS 162
+ ++F+Y ++ I++ I QD IESGS C+
Sbjct: 63 VRLSFHYDTKRRIAQEAAKIVQDNETIMIESGSTCA 98
>gi|125717153|ref|YP_001034286.1| sugar metabolism transcriptional repressor [Streptococcus sanguinis
SK36]
gi|125497070|gb|ABN43736.1| Transcriptional repressor of sugar metabolism, GlpR/DeoR family,
putative [Streptococcus sanguinis SK36]
gi|327468652|gb|EGF14131.1| DeoR family transcriptional regulator [Streptococcus sanguinis
SK330]
Length = 247
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 75 ISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDD-DILCVLKEAEDQTRLNTG--LN 131
+ E+VKL+ F + +L + +KV + R LD + +L+ LN+G LN
Sbjct: 4 LDEIVKLVSEFERIDVNTLS-DRLKVSKVTIRKDLDKLETKGLLRREHGYAVLNSGDDLN 62
Query: 132 LFIAFNYSSRDEISRAIKNIFQD-----IESGSVCS 162
+ ++F+Y ++ I++ I QD IESGS C+
Sbjct: 63 VRLSFHYDTKRRIAQEAAKIVQDNETIMIESGSTCA 98
>gi|332364334|gb|EGJ42108.1| DeoR family transcriptional regulator [Streptococcus sanguinis
SK355]
Length = 247
Score = 35.0 bits (79), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 75 ISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDD-DILCVLKEAEDQTRLNTG--LN 131
+ E+VKL+ F + +L + +KV + R LD + +L+ LN+G LN
Sbjct: 4 LDEIVKLVSEFERIDVNTLS-DRLKVSKVTIRKDLDKLETKGLLRREHGYAVLNSGDDLN 62
Query: 132 LFIAFNYSSRDEISRAIKNIFQD-----IESGSVCS 162
+ ++F+Y ++ I++ I QD IESGS C+
Sbjct: 63 VRLSFHYDTKRRIAQEAAKIVQDNETIMIESGSTCA 98
>gi|324992218|gb|EGC24140.1| DeoR family transcriptional regulator [Streptococcus sanguinis
SK405]
gi|324994309|gb|EGC26223.1| DeoR family transcriptional regulator [Streptococcus sanguinis
SK678]
gi|325697842|gb|EGD39726.1| DeoR family transcriptional regulator [Streptococcus sanguinis
SK160]
gi|327490736|gb|EGF22517.1| DeoR family transcriptional regulator [Streptococcus sanguinis
SK1058]
gi|332364833|gb|EGJ42602.1| DeoR family transcriptional regulator [Streptococcus sanguinis
SK1059]
Length = 247
Score = 35.0 bits (79), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 75 ISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDD-DILCVLKEAEDQTRLNTG--LN 131
+ E+VKL+ F + +L + +KV + R LD + +L+ LN+G LN
Sbjct: 4 LDEIVKLVSEFERIDVNTLS-DRLKVSKVTIRKDLDKLETKGLLRREHGYAVLNSGDDLN 62
Query: 132 LFIAFNYSSRDEISRAIKNIFQD-----IESGSVCS 162
+ ++F+Y ++ I++ I QD IESGS C+
Sbjct: 63 VRLSFHYDTKRRIAQEAAKIVQDNETIMIESGSTCA 98
>gi|170103368|ref|XP_001882899.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164642270|gb|EDR06527.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 94
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 93 LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIF 152
L + +++ V+G L + + +++AE TR NT L + +Y+SRDEI+ A+++
Sbjct: 18 LDEYGVRLNVLGRTSLLPEKVQLAVQKAEYITRRNTRAILNLCMSYTSRDEITTAVESCV 77
Query: 153 Q--DIESGSVCSHDVDS 167
+ D + + D+D+
Sbjct: 78 RNADPSNPQITEEDIDA 94
>gi|83286235|ref|XP_730073.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
gi|23489661|gb|EAA21638.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 264
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 32/74 (43%)
Query: 53 VGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDD 112
+G KN++I + +N+ S+ E I F + SL KN K R N+ +L DD
Sbjct: 128 IGTKNMSINKSNYSNYTHMYSDNEENNICIDKFQDNKYPSLVKNKTKNRYFKNKNTLTDD 187
Query: 113 ILCVLKEAEDQTRL 126
C E L
Sbjct: 188 STCTPDEENSNNEL 201
>gi|151941813|gb|EDN60169.1| nuclear undecaprenyl pyrophosphate synthase [Saccharomyces
cerevisiae YJM789]
gi|190405187|gb|EDV08454.1| prenyltransferase [Saccharomyces cerevisiae RM11-1a]
gi|207347128|gb|EDZ73415.1| YDL193Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270067|gb|EEU05312.1| Nus1p [Saccharomyces cerevisiae JAY291]
gi|259145051|emb|CAY78315.1| Nus1p [Saccharomyces cerevisiae EC1118]
Length = 375
Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 75/196 (38%), Gaps = 19/196 (9%)
Query: 44 NEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVI 103
+EIV GIK+L ++ + R + EL I S L K F N V++
Sbjct: 180 SEIVCWTVSAGIKHLMLYDYDGILQRN----VPELRMEIHSNLAKYFGPAHVPNYAVKIP 235
Query: 104 -GNRLSLDDDILCVLKEAEDQTRLNT-----GLNLFIAFNYSSRDEISRAIKNIFQDIES 157
N++ + D + + ++ N + + + N R+ I K + +
Sbjct: 236 HSNKIFYNLDGIETETDVGNEIEANQEKDKIAIEISLLSNRDGRETIVDLTKTMAELCAV 295
Query: 158 GSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDF 217
+ D+ L+ L P+PDL++ G L F W + +EF YW
Sbjct: 296 NELSVSDITMDLVDSELKQLVGPEPDLLLYFGPSLDLQGFPPWHIRLTEF-----YWEKD 350
Query: 218 SRE----LFFHALNQY 229
+ E +F L QY
Sbjct: 351 NNEVIYSVFIRGLRQY 366
Searching..................................................done
Results from round 2
>gi|20807851|ref|NP_623022.1| undecaprenyl pyrophosphate synthase [Thermoanaerobacter
tengcongensis MB4]
gi|254479462|ref|ZP_05092789.1| undecaprenyl pyrophosphate synthetase 1 [Carboxydibrachium
pacificum DSM 12653]
gi|42559997|sp|Q8RA26|UPPS_THETN RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|20516414|gb|AAM24626.1| Undecaprenyl pyrophosphate synthase [Thermoanaerobacter
tengcongensis MB4]
gi|214034605|gb|EEB75352.1| undecaprenyl pyrophosphate synthetase 1 [Carboxydibrachium
pacificum DSM 12653]
Length = 247
Score = 328 bits (840), Expect = 6e-88, Method: Composition-based stats.
Identities = 106/239 (44%), Positives = 147/239 (61%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + + P H+GIIMDGNGRWA RG+PR GH+ G+ E++ + E+GIK LT+
Sbjct: 9 LIKKLDKTRLPQHVGIIMDGNGRWAQKRGMPRVYGHKAGVNAVREVIRSCRELGIKYLTL 68
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E+ L+ L+ +L K L KNN+ V+ IG+ L + +++A
Sbjct: 69 YAFSTENWKRPKEEVDFLMDLLVEYLSKEVDELNKNNVVVKFIGDISRLPEKCQIEIEKA 128
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ T NTGL + IA NY RDEI +A +NI + + + + D+ I ++L T+ P
Sbjct: 129 QKLTEKNTGLVVNIALNYGGRDEIVKATQNICKKVLNRELSPEDITEDTITQHLYTASQP 188
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDLIIRT GEKRLS+FLLWQ AYSE F WPDF + AL Y R RRFGG+
Sbjct: 189 DPDLIIRTSGEKRLSNFLLWQSAYSELWFTEVLWPDFKKRHLIEALLYYQTRKRRFGGV 247
>gi|289578397|ref|YP_003477024.1| undecaprenyl diphosphate synthase [Thermoanaerobacter italicus Ab9]
gi|297544673|ref|YP_003676975.1| undecaprenyl diphosphate synthase [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|289528110|gb|ADD02462.1| undecaprenyl diphosphate synthase [Thermoanaerobacter italicus Ab9]
gi|296842448|gb|ADH60964.1| undecaprenyl diphosphate synthase [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 249
Score = 323 bits (827), Expect = 2e-86, Method: Composition-based stats.
Identities = 107/239 (44%), Positives = 143/239 (59%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + P HIGIIMDGNGRWA RG+ R GH+ G+ E+V A E+GIK LT+
Sbjct: 11 LTGKIDKNKLPTHIGIIMDGNGRWAQKRGMMRFYGHKAGVNAVREVVKACRELGIKYLTL 70
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E++ L+ L+ +L K L KNN+ + IG+ L ++ A
Sbjct: 71 YAFSTENWKRPKEEVNFLMDLLVEYLSKEVDELNKNNVLINFIGDISVLPQGCKTEIERA 130
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
++ T+ N GL L IA NY RDEI +A+K I + + + + I+ L T + P
Sbjct: 131 QNITKNNFGLVLNIALNYGGRDEIVKAVKKICTKVLNKELTIEGITEQTISDNLYTKNQP 190
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDLIIRT GEKRLS+FLLWQ AYSEF F WPDF +E A+ Y R RRFGG+
Sbjct: 191 DPDLIIRTSGEKRLSNFLLWQSAYSEFWFTEVLWPDFKKEHLIKAILYYQTRQRRFGGV 249
>gi|260063794|ref|YP_003196874.1| Undecaprenyl pyrophosphate synthase [Robiginitalea biformata
HTCC2501]
gi|88783239|gb|EAR14412.1| Undecaprenyl pyrophosphate synthase [Robiginitalea biformata
HTCC2501]
Length = 246
Score = 321 bits (822), Expect = 7e-86, Method: Composition-based stats.
Identities = 103/241 (42%), Positives = 153/241 (63%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+A + P H+ IIMDGNGRWA RG R GH G++ E V AA++G++ LT++
Sbjct: 4 IAEIKKGRLPRHLAIIMDGNGRWAKQRGKLRVFGHENGVKAVRETVETAAKIGVEYLTLY 63
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E+ L+KL+ + L+K +L NNI++R IG SL L L+E
Sbjct: 64 AFSTENWKRPKLEVETLMKLLVASLRKELKTLNDNNIRLRAIGRIESLPKKALKELREVM 123
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ T NTG L +A +Y SR+E++ A+K++ +++ + D+D ++I ++L T D+PD
Sbjct: 124 EMTGKNTGTTLTLALSYGSREELTTAVKSLCTKVKNNIISPGDIDEAIINEHLYTHDLPD 183
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRT GE R+S+FLLWQ+AY+E F +WPDFS + AL Y R+RRFG S+
Sbjct: 184 VDLLIRTSGEHRISNFLLWQIAYAELYFTDVFWPDFSEQHLIEALKDYQNRERRFGKTSE 243
Query: 242 K 242
+
Sbjct: 244 Q 244
>gi|254780775|ref|YP_003065188.1| undecaprenyl diphosphate synthase [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040452|gb|ACT57248.1| undecaprenyl diphosphate synthase [Candidatus Liberibacter
asiaticus str. psy62]
Length = 243
Score = 319 bits (818), Expect = 2e-85, Method: Composition-based stats.
Identities = 243/243 (100%), Positives = 243/243 (100%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI
Sbjct: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA
Sbjct: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP
Sbjct: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS
Sbjct: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
Query: 241 KKG 243
KKG
Sbjct: 241 KKG 243
>gi|327403113|ref|YP_004343951.1| Undecaprenyl pyrophosphate synthase [Fluviicola taffensis DSM
16823]
gi|327318621|gb|AEA43113.1| Undecaprenyl pyrophosphate synthase [Fluviicola taffensis DSM
16823]
Length = 245
Score = 318 bits (816), Expect = 3e-85, Method: Composition-based stats.
Identities = 103/242 (42%), Positives = 148/242 (61%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + ++ P HI IIMDGNGRWA +G R GH G++ + A +VG+K +T+
Sbjct: 3 LLEQIDLTNIPKHIAIIMDGNGRWAKKQGQERLYGHSFGVDSVRATLTACKDVGVKFVTM 62
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP E+ L+ L+ + L N+K+ IG+ L +D LK A
Sbjct: 63 YAFSTENWNRPQDEVEGLMSLLVYTIANEVNELNAQNVKLLSIGDTAGLPEDCQDELKNA 122
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ T+ NTG+NL IA NYSSR EI+ A K + +I++G + ++ LI+ L T +P
Sbjct: 123 IESTKNNTGVNLVIALNYSSRWEIAEAFKQLASNIQAGDLTISEITPELISSTLSTKHIP 182
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DP+L+IRT GE+RLS+FLLWQVAYSEF F P WPDF + A+ Y R+RRFG +S
Sbjct: 183 DPELLIRTSGEQRLSNFLLWQVAYSEFYFTPVLWPDFREVDLYKAVLDYQSRERRFGMVS 242
Query: 241 KK 242
++
Sbjct: 243 EQ 244
>gi|253681610|ref|ZP_04862407.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum D
str. 1873]
gi|253561322|gb|EES90774.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum D
str. 1873]
Length = 253
Score = 318 bits (814), Expect = 5e-85, Method: Composition-based stats.
Identities = 107/238 (44%), Positives = 149/238 (62%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+++ + P HI IIMDGNGRWA + LPR GH+ G+E EIV + +G+K LT++A
Sbjct: 16 SNLNKDNIPKHIAIIMDGNGRWAKQKKLPRTLGHKSGVETIREIVKECSNLGVKILTLYA 75
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW+RP E+ L+KL+ +LKK L + N+ +R IG+ L L A +
Sbjct: 76 FSTENWKRPKEEVGALMKLLVEYLKKELKELHEENVIIRTIGDISKLPKICQEELTNAYN 135
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T+ NTGL L +A NY RDEI A+K I I+ G++ D++ +I++ L T ++ DP
Sbjct: 136 TTKNNTGLILNLALNYGGRDEIINAMKEIGAKIKEGTLSPEDINEEVISQVLYTKNLSDP 195
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
D+IIRT GE+RLS+FLLWQ AYSEF + WPDF ++ A+ Y RDRRFGGL
Sbjct: 196 DIIIRTAGEQRLSNFLLWQCAYSEFWYTDIKWPDFKKDDLCKAIYDYQNRDRRFGGLK 253
>gi|167037632|ref|YP_001665210.1| undecaprenyl pyrophosphate synthase [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320116047|ref|YP_004186206.1| undecaprenyl diphosphate synthase [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|326389446|ref|ZP_08211013.1| undecaprenyl diphosphate synthase [Thermoanaerobacter ethanolicus
JW 200]
gi|166856466|gb|ABY94874.1| undecaprenyl diphosphate synthase [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319929138|gb|ADV79823.1| undecaprenyl diphosphate synthase [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|325994451|gb|EGD52876.1| undecaprenyl diphosphate synthase [Thermoanaerobacter ethanolicus
JW 200]
Length = 249
Score = 317 bits (813), Expect = 7e-85, Method: Composition-based stats.
Identities = 107/239 (44%), Positives = 146/239 (61%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + P HIGIIMDGNGRWA RG+ R GH+ G+ E+V A+ E+GIK LT+
Sbjct: 11 LSDKIDKNKLPIHIGIIMDGNGRWAQKRGMMRFYGHKAGVNAVREVVKASRELGIKYLTL 70
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E++ L+ L+ +L K L KNN+ + IG+ L + + A
Sbjct: 71 YAFSTENWKRPKEEVNFLMDLLVEYLSKEVDELNKNNVLINFIGDISVLPEKCKIEIDRA 130
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
++ T+ N+GL L IA NY RDEI +A+K I I + + ++ I++ L T + P
Sbjct: 131 QNVTKNNSGLVLNIALNYGGRDEIVKAVKKICTKILNKELSIEEITEQTISENLYTKNQP 190
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDLIIRT GEKRLS+FLLWQ AYSE F WPDF +E A+ Y R RRFGG+
Sbjct: 191 DPDLIIRTSGEKRLSNFLLWQSAYSELWFTEVLWPDFGKEHLIEAILYYQTRQRRFGGV 249
>gi|307264904|ref|ZP_07546466.1| undecaprenyl diphosphate synthase [Thermoanaerobacter wiegelii
Rt8.B1]
gi|306920162|gb|EFN50374.1| undecaprenyl diphosphate synthase [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 249
Score = 316 bits (811), Expect = 1e-84, Method: Composition-based stats.
Identities = 107/239 (44%), Positives = 145/239 (60%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + P HIGIIMDGNGRWA RG+ R GH+ G+ E+V A+ E+GIK LT+
Sbjct: 11 LSDKIDKNKLPIHIGIIMDGNGRWAQKRGMMRFYGHKAGVNAVREVVKASRELGIKYLTL 70
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E++ L+ L+ +L K L KNN+ + IG+ L + A
Sbjct: 71 YAFSTENWKRPKEEVNFLMDLLVEYLSKEVDELNKNNVLINFIGDISVLPQKCKIEIDRA 130
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
++ T+ N+GL L IA NY RDEI +A+K I I + + ++ I++ L T + P
Sbjct: 131 QNVTKNNSGLVLNIALNYGGRDEIVKAVKKICTKILNKELSIEEITEQTISENLYTKNQP 190
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDLIIRT GEKRLS+FLLWQ AYSE F WPDF +E A+ Y R RRFGG+
Sbjct: 191 DPDLIIRTSGEKRLSNFLLWQSAYSELWFTEVLWPDFGKEHLIEAILYYQTRQRRFGGV 249
>gi|167040293|ref|YP_001663278.1| undecaprenyl pyrophosphate synthase [Thermoanaerobacter sp. X514]
gi|256750777|ref|ZP_05491662.1| undecaprenyl diphosphate synthase [Thermoanaerobacter ethanolicus
CCSD1]
gi|300914377|ref|ZP_07131693.1| undecaprenyl diphosphate synthase [Thermoanaerobacter sp. X561]
gi|307724387|ref|YP_003904138.1| undecaprenyl diphosphate synthase [Thermoanaerobacter sp. X513]
gi|166854533|gb|ABY92942.1| undecaprenyl diphosphate synthase [Thermoanaerobacter sp. X514]
gi|256750360|gb|EEU63379.1| undecaprenyl diphosphate synthase [Thermoanaerobacter ethanolicus
CCSD1]
gi|300889312|gb|EFK84458.1| undecaprenyl diphosphate synthase [Thermoanaerobacter sp. X561]
gi|307581448|gb|ADN54847.1| undecaprenyl diphosphate synthase [Thermoanaerobacter sp. X513]
Length = 249
Score = 316 bits (811), Expect = 1e-84, Method: Composition-based stats.
Identities = 108/239 (45%), Positives = 146/239 (61%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + P HIGIIMDGNGRWA RG+ R GH+ G+ E+V A+ E+GIK LT+
Sbjct: 11 LSDKIDKNKLPIHIGIIMDGNGRWAQKRGMMRFYGHKAGVNAVREVVKASRELGIKYLTL 70
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E++ L+ L+ FL K L KNN+ + IG+ L ++ A
Sbjct: 71 YAFSTENWKRPKEEVNFLMDLLVEFLSKEIDELNKNNVLINFIGDISVLPQKCKIEIERA 130
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
++ T+ N+GL L IA NY RDEI +A+K I I + + ++ I++ L T + P
Sbjct: 131 QNVTKNNSGLVLNIALNYGGRDEIVKAVKKICTKILNKELSIEEITEQTISENLYTKNQP 190
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDLIIRT GEKRLS+FLLWQ AYSE F WPDF +E A+ Y R RRFGG+
Sbjct: 191 DPDLIIRTSGEKRLSNFLLWQSAYSELWFTEVLWPDFGKEHLIEAILYYQTRQRRFGGV 249
>gi|298207449|ref|YP_003715628.1| Undecaprenyl pyrophosphate synthase [Croceibacter atlanticus
HTCC2559]
gi|83850085|gb|EAP87953.1| Undecaprenyl pyrophosphate synthase [Croceibacter atlanticus
HTCC2559]
Length = 258
Score = 316 bits (809), Expect = 2e-84, Method: Composition-based stats.
Identities = 105/239 (43%), Positives = 154/239 (64%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ + P HI IIMDGNGRWA +GL R AGH KG + E V AE+G+KNLT++AF
Sbjct: 18 TINKDALPKHIAIIMDGNGRWAKKQGLLRVAGHEKGTKAVREAVEGCAELGVKNLTLYAF 77
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP E+ +L+ L+ S LKK +L+ N IK+ IG SL L E +++
Sbjct: 78 STENWNRPKFEVDKLMNLLVSSLKKEIKTLQDNKIKLSTIGTISSLPKKAQKELAEVKEK 137
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NT +NL +A +Y SR+EI + +K I + + S + D+ + LI ++L T+ +PD D
Sbjct: 138 TKDNTHMNLTLALSYGSREEILQMVKGIGEQVASNQITPEDITTKLIEEHLYTNFLPDVD 197
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRT GE+R+S+FLLWQ+AY+E F WPDF ++ +A++ Y R+RRFG S++
Sbjct: 198 LLIRTSGEQRISNFLLWQIAYAELFFTEVLWPDFRKKDLLNAIHNYQNRERRFGKTSEQ 256
>gi|295399843|ref|ZP_06809824.1| undecaprenyl diphosphate synthase [Geobacillus thermoglucosidasius
C56-YS93]
gi|312111645|ref|YP_003989961.1| undecaprenyl diphosphate synthase [Geobacillus sp. Y4.1MC1]
gi|294978246|gb|EFG53843.1| undecaprenyl diphosphate synthase [Geobacillus thermoglucosidasius
C56-YS93]
gi|311216746|gb|ADP75350.1| undecaprenyl diphosphate synthase [Geobacillus sp. Y4.1MC1]
Length = 258
Score = 315 bits (808), Expect = 3e-84, Method: Composition-based stats.
Identities = 107/235 (45%), Positives = 153/235 (65%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
++ P H+ IIMDGNGRWA R LPR AGH +G++V +I A E+GIK L+++AFS
Sbjct: 24 ILQHPIPKHVAIIMDGNGRWAKKRALPRAAGHYEGMQVVRKITRFANELGIKILSLYAFS 83
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP SE+ L+KL + FL L + N+ VRVIGN L + +++A ++T
Sbjct: 84 TENWKRPKSEVEYLMKLPEQFLTTFLPELIEENVNVRVIGNTEQLPEHTRRAVEKAINET 143
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NTGL L A NY SR EI+ A++ I +DI++G + + L++ YL T D+ DPDL
Sbjct: 144 KDNTGLILNFALNYGSRAEITYAVQQIAKDIQNGRLSPEQITEELVSSYLMTKDLMDPDL 203
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE RLS+F+LWQ+AY+EF F WPDF+ + A+ + R+RRFGG+
Sbjct: 204 LIRTSGEIRLSNFMLWQLAYTEFWFTDVLWPDFTEQHLLEAIAAFQKRNRRFGGV 258
>gi|261419453|ref|YP_003253135.1| undecaprenyl pyrophosphate synthase [Geobacillus sp. Y412MC61]
gi|297530572|ref|YP_003671847.1| undecaprenyl diphosphate synthase [Geobacillus sp. C56-T3]
gi|319766268|ref|YP_004131769.1| undecaprenyl diphosphate synthase [Geobacillus sp. Y412MC52]
gi|261375910|gb|ACX78653.1| undecaprenyl diphosphate synthase [Geobacillus sp. Y412MC61]
gi|297253824|gb|ADI27270.1| undecaprenyl diphosphate synthase [Geobacillus sp. C56-T3]
gi|317111134|gb|ADU93626.1| undecaprenyl diphosphate synthase [Geobacillus sp. Y412MC52]
Length = 257
Score = 315 bits (807), Expect = 3e-84, Method: Composition-based stats.
Identities = 112/240 (46%), Positives = 155/240 (64%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
++ P+H+ IIMDGNGRWA R LPR AGH +G++V +I A E+GI+ L+++A
Sbjct: 18 EEVLRHPMPNHVAIIMDGNGRWAKKRALPRAAGHYEGMQVVRKITRFANELGIQILSLYA 77
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW+RP SE+ L+KL + FL L N+KV+VIG+ +L D +++A
Sbjct: 78 FSTENWKRPKSEVDYLMKLPEQFLTTFLPELVAENVKVQVIGHTEALPDHTRRAVEKAVK 137
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
+T NTGL L A NY SR EI+ A+K I +D+E G + D+ LI+ YL TS + DP
Sbjct: 138 ETSGNTGLVLNFALNYGSRAEITAAVKQIAKDVERGMLAPEDITEPLISSYLMTSGLADP 197
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL+IRT GE RLS+F+LWQ+AY+E F WPDF+ + F A+ Y RDRRFGG+S +
Sbjct: 198 DLLIRTSGEIRLSNFMLWQLAYTELWFTDVLWPDFTEQHFLEAIAAYQRRDRRFGGVSAR 257
>gi|56419788|ref|YP_147106.1| undecaprenyl pyrophosphate synthase [Geobacillus kaustophilus
HTA426]
gi|73920260|sp|Q5L0J8|UPPS_GEOKA RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|56379630|dbj|BAD75538.1| undecaprenyl pyrophosphate synthetase (UPP synthetase) [Geobacillus
kaustophilus HTA426]
Length = 257
Score = 315 bits (807), Expect = 4e-84, Method: Composition-based stats.
Identities = 112/240 (46%), Positives = 155/240 (64%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
++ P+H+ IIMDGNGRWA R LPR AGH +G++V +I A E+GI+ L+++A
Sbjct: 18 EEVLRHPMPNHVAIIMDGNGRWAKKRALPRAAGHYEGMQVVRKITRFANELGIQILSLYA 77
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW+RP SE+ L+KL + FL L N+KV+VIG+ +L D +++A
Sbjct: 78 FSTENWKRPKSEVDYLMKLPEQFLTTFLPELVAENVKVQVIGHTEALPDHTRRAVEKAVK 137
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
+T NTGL L A NY SR EI+ A+K I +D+E G + D+ LI+ YL TS + DP
Sbjct: 138 ETSGNTGLVLNFALNYGSRAEIAAAVKQIAKDVERGMLAPEDITEPLISSYLMTSGLADP 197
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL+IRT GE RLS+F+LWQ+AY+E F WPDF+ + F A+ Y RDRRFGG+S +
Sbjct: 198 DLLIRTSGEIRLSNFMLWQLAYTELWFTDVLWPDFTEQHFLEAIAAYQRRDRRFGGVSAR 257
>gi|138894773|ref|YP_001125226.1| undecaprenyl pyrophosphate synthase [Geobacillus
thermodenitrificans NG80-2]
gi|196247604|ref|ZP_03146306.1| undecaprenyl diphosphate synthase [Geobacillus sp. G11MC16]
gi|134266286|gb|ABO66481.1| Undecaprenyl diphosphate synthase [Geobacillus thermodenitrificans
NG80-2]
gi|196212388|gb|EDY07145.1| undecaprenyl diphosphate synthase [Geobacillus sp. G11MC16]
Length = 257
Score = 315 bits (807), Expect = 4e-84, Method: Composition-based stats.
Identities = 111/238 (46%), Positives = 155/238 (65%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
++S P+H+ IIMDGNGRWA R LPR AGH +G++V +I A E+G++ L+++AFS
Sbjct: 20 VLSHPIPNHVAIIMDGNGRWAKKRALPRVAGHYEGMQVVRKITRFANELGVRVLSLYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP SE+ L+KL + FL L N+KV+VIG L D ++ A +T
Sbjct: 80 TENWKRPKSEVDYLMKLPEQFLTTFLPELVAENVKVQVIGRTDELPDHTRQAVRRAIHET 139
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NTGL L A NY SR EI+ A++ I +D++ G++ D+ SLI+ YL T + DPDL
Sbjct: 140 SGNTGLILNFALNYGSRAEITAAVQQIAKDVQRGALAPGDITESLISSYLMTGGLDDPDL 199
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IRT GE RLS+F+LWQ+AY+EF F WPDF+ + F A+ Y RDRRFGG+S +
Sbjct: 200 LIRTSGEIRLSNFMLWQLAYTEFWFTDVLWPDFTEQHFLQAIAAYQQRDRRFGGVSAR 257
>gi|331269637|ref|YP_004396129.1| undecaprenyl diphosphate synthase [Clostridium botulinum BKT015925]
gi|329126187|gb|AEB76132.1| undecaprenyl diphosphate synthase [Clostridium botulinum BKT015925]
Length = 253
Score = 315 bits (807), Expect = 4e-84, Method: Composition-based stats.
Identities = 107/238 (44%), Positives = 151/238 (63%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+++ + P HI IIMDGNGRWA + LPR GH+ G+E EIV +++ +K LT++A
Sbjct: 16 SNLNKDNIPKHIAIIMDGNGRWAKQKKLPRTLGHKAGVETIREIVKECSKLDVKILTLYA 75
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW+RP E+ L+KL+ +LKK L + N+ +R IG+ L + L A +
Sbjct: 76 FSTENWKRPKEEVGALMKLLVEYLKKELKELHEENVVIRTIGDISKLPNICQEELTNAYN 135
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T+ NTGL L +A NY RDEI A+K I + I+ G + D++ LI+++L T ++ DP
Sbjct: 136 TTKNNTGLTLNLALNYGGRDEIINAMKVIGEKIQEGDLSPEDINEKLISQFLYTKNLDDP 195
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
D+IIRT GE+RLS+FLLWQ AYSEF + WPDF ++ A+ Y RDRRFGGL
Sbjct: 196 DIIIRTAGEQRLSNFLLWQCAYSEFWYTDIKWPDFKKDDLCKAIYDYQNRDRRFGGLK 253
>gi|239826647|ref|YP_002949271.1| undecaprenyl pyrophosphate synthase [Geobacillus sp. WCH70]
gi|239806940|gb|ACS24005.1| undecaprenyl diphosphate synthase [Geobacillus sp. WCH70]
Length = 258
Score = 314 bits (806), Expect = 4e-84, Method: Composition-based stats.
Identities = 106/237 (44%), Positives = 153/237 (64%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+M + P H+ IIMDGNGRWA R LPR AGH +G++V +I A E+GIK L+++A
Sbjct: 22 EEIMQNPIPKHVAIIMDGNGRWAKKRALPRAAGHYEGMQVVRKITRFANELGIKILSLYA 81
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW+RP SE+ L+KL + FL L + N+ VRVIG+ L + ++ A D
Sbjct: 82 FSTENWKRPKSEVDYLMKLPEQFLTTFLPELAEENVNVRVIGHIERLPEHTRRAVERAID 141
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
+T+ NTGL L A NY SR EI+ A++ I ++++ G + ++ L++ YL T D+ DP
Sbjct: 142 ETKENTGLILNFALNYGSRAEITYAMQQIAKEVQKGWLSPEEITEELVSSYLMTKDLTDP 201
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DL+IRT GE RLS+F+LWQ+AY+EF F WPDF+ + A+ + R+RRFGG+
Sbjct: 202 DLLIRTSGEIRLSNFMLWQLAYTEFWFTDVLWPDFTEQHLLEAIAAFQKRNRRFGGV 258
>gi|164687910|ref|ZP_02211938.1| hypothetical protein CLOBAR_01555 [Clostridium bartlettii DSM
16795]
gi|164602323|gb|EDQ95788.1| hypothetical protein CLOBAR_01555 [Clostridium bartlettii DSM
16795]
Length = 243
Score = 314 bits (804), Expect = 8e-84, Method: Composition-based stats.
Identities = 108/240 (45%), Positives = 148/240 (61%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + P HI IIMDGNGRWA R LPR AGH+ G+E I+ +GIK++T+
Sbjct: 4 MFFDINMEKLPKHIAIIMDGNGRWAKKRFLPRTAGHKAGVETVRTIITECKRLGIKHVTL 63
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW+RP E+ L+ L++++LKK L +NN+++ IG+ L L LK A
Sbjct: 64 YTFSTENWKRPALEVETLMMLLQTYLKKEVEELNRNNVRLTAIGDIEKLPKACLEELKRA 123
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ T+ N G NL +A NY R +I+ A+K I +DIE+ + S D+ I YL T +P
Sbjct: 124 MELTKDNDGPNLNLALNYGGRYDITNAVKQISRDIENHKLNSDDITEETIKNYLSTKSIP 183
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GE+RLS+FLLW++AY+E F YWPDF + A+ Y RDRRFGGL
Sbjct: 184 DPDLVIRTSGEQRLSNFLLWELAYAELYFTDVYWPDFDEKELQKAIYTYQNRDRRFGGLK 243
>gi|124006242|ref|ZP_01691077.1| undecaprenyl diphosphate synthase [Microscilla marina ATCC 23134]
gi|123988166|gb|EAY27824.1| undecaprenyl diphosphate synthase [Microscilla marina ATCC 23134]
Length = 248
Score = 314 bits (804), Expect = 9e-84, Method: Composition-based stats.
Identities = 110/242 (45%), Positives = 161/242 (66%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M ++ S + P HI +IMDGNGRWA +G R GH+ ++ ++ A+AE+GIK LT+
Sbjct: 1 MKDNINSENLPQHIAVIMDGNGRWAKKKGARRVFGHKNAVKAVRDVTEASAELGIKYLTL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP +E+ L+KL+ S ++K +L KNN+K++ IGNR L L EA
Sbjct: 61 YAFSTENWSRPKAEVEALMKLLVSTIRKEVKTLVKNNVKLQSIGNRDDLPKGCQRELAEA 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ T+ +TGL L +A +YS R +I A+K+I D+++G V HD++++L +KYL T +P
Sbjct: 121 IELTKDHTGLTLTLALSYSGRWDIVNAVKDIAHDVKNGKVDPHDINTNLFSKYLSTDKMP 180
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DP+L+IRT GE R+S+FLLWQ+AYSE P WPDF RE + A+ Y R+RRFG S
Sbjct: 181 DPELMIRTSGEMRVSNFLLWQLAYSEIYISPILWPDFRREHLYEAIIDYQKRERRFGKTS 240
Query: 241 KK 242
++
Sbjct: 241 EQ 242
>gi|295696147|ref|YP_003589385.1| undecaprenyl diphosphate synthase [Bacillus tusciae DSM 2912]
gi|295411749|gb|ADG06241.1| undecaprenyl diphosphate synthase [Bacillus tusciae DSM 2912]
Length = 258
Score = 314 bits (804), Expect = 9e-84, Method: Composition-based stats.
Identities = 109/235 (46%), Positives = 152/235 (64%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P H+ IIMDGNGRWA RGLPR AGHR G++ E+ AA E+GI+ LT++AFS
Sbjct: 12 VNPVNLPRHVAIIMDGNGRWAHRRGLPRVAGHRAGMKAVKEVTRAADEIGIQVLTLYAFS 71
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+ L++L + FL + L ++ ++VR+IG L L ++ A +T
Sbjct: 72 TENWKRPPEEVDYLMRLPQEFLDRELQELDEHGVRVRLIGETDGLPPHTLRAVEAAMGRT 131
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
R NTGL L A NY +R E+ A+++I + ++ G + DVD + I+ L T D+PDPDL
Sbjct: 132 RNNTGLILNFALNYGARAELVNAVRSIARRVQDGELGPEDVDEATISAALQTRDLPDPDL 191
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE R+S+FLLWQ+AYSE F WPDF+RE F A+ Y R RRFGG+
Sbjct: 192 LIRTSGELRISNFLLWQIAYSELWFTEVLWPDFTREHLFEAVRAYQSRKRRFGGV 246
>gi|258516350|ref|YP_003192572.1| undecaprenyl diphosphate synthase [Desulfotomaculum acetoxidans DSM
771]
gi|257780055|gb|ACV63949.1| undecaprenyl diphosphate synthase [Desulfotomaculum acetoxidans DSM
771]
Length = 266
Score = 314 bits (804), Expect = 9e-84, Method: Composition-based stats.
Identities = 101/241 (41%), Positives = 147/241 (60%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++AS+ + P HI IIMDGNGRWA RGLPR GHR G++ IV ++ I+ LT
Sbjct: 25 LIASIDPARLPKHIAIIMDGNGRWAKKRGLPRALGHRAGVDALRNIVKLCRQLEIEYLTC 84
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E++ L+ L+ FL+K L N ++V IG L L+ A
Sbjct: 85 YAFSTENWKRPPKEVTALMNLLVEFLQKEIDELCANYVRVSSIGRTEELPPAAQKALQMA 144
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+++ N GL L +A NY R E+ A++ + ++++ G V +D + I +YL TS++P
Sbjct: 145 VNKSSNNNGLILNLALNYGGRAELVEAVRQLAREVKQGLVDPEAIDENTIGRYLYTSELP 204
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT G+ R+S+FLLWQ+AY+EF P WPDF +A+ Y R+RRFGG+
Sbjct: 205 DPDLLIRTSGDFRISNFLLWQLAYTEFWLTPVLWPDFKPLHLLNAIVDYQNRERRFGGIK 264
Query: 241 K 241
Sbjct: 265 D 265
>gi|126663128|ref|ZP_01734126.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase)
[Flavobacteria bacterium BAL38]
gi|126624786|gb|EAZ95476.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase)
[Flavobacteria bacterium BAL38]
Length = 251
Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats.
Identities = 104/242 (42%), Positives = 154/242 (63%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+V + ++S P H+ IIMDGNGRWA +GL R GH G + V A++GI+NLT+
Sbjct: 3 LVQQINTASLPKHLAIIMDGNGRWAKQKGLIRALGHESGTKSVKVTVETCAKLGIQNLTL 62
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP E+ L+KL+ S LKK +L+ NNIK+ IGN +L + L+E
Sbjct: 63 YAFSTENWNRPKLEVETLMKLLISSLKKEIKTLQSNNIKLNAIGNLTNLPTKVQKELQEV 122
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
D+T NT + L +A +Y +R+EI +A+K I +++ + +D S+I ++L T ++P
Sbjct: 123 IDKTSENTRMTLTLALSYGAREEIVQAVKKISDKVKNNIISEQAIDESIINQHLYTHNLP 182
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
D DL+IRT GE R+S+FLLWQ+AY+EF F WPDF+ + A+ Y R+RRFG S
Sbjct: 183 DVDLVIRTSGEHRISNFLLWQIAYAEFYFTDVLWPDFTENNLYEAIISYQKRERRFGKTS 242
Query: 241 KK 242
++
Sbjct: 243 EQ 244
>gi|237795866|ref|YP_002863418.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum
Ba4 str. 657]
gi|229261238|gb|ACQ52271.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum
Ba4 str. 657]
Length = 252
Score = 313 bits (802), Expect = 1e-83, Method: Composition-based stats.
Identities = 109/237 (45%), Positives = 152/237 (64%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ ++ P HI IIMDGNGRWA R LPR GH+ G+E EIV +G+K LT++AF
Sbjct: 16 NLDMNNIPKHIAIIMDGNGRWAKERSLPRTMGHKAGVETIREIVKECNNLGVKYLTLYAF 75
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP E+S L+ L+ +L+K L +NN+ V IGN L + + L++A ++
Sbjct: 76 STENWKRPKDEVSALMTLLVQYLRKEVKELNENNVIVNTIGNIEKLPEVCIKELEKAYEE 135
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NTGL L +A NY RDEI RA+K +++DI+ G + D++ ++ YL T + DPD
Sbjct: 136 TKNNTGLVLNLALNYGGRDEIIRAVKYMYEDIKVGKIKEEDINEENLSDYLYTKGMLDPD 195
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LIIR GEKR+S+FLLWQ AYSEF + WPDF +E A+ Y RDRRFG +
Sbjct: 196 LIIRPSGEKRISNFLLWQCAYSEFWYSDIKWPDFKKEHLHKAIYDYQNRDRRFGTVK 252
>gi|148380388|ref|YP_001254929.1| undecaprenyl diphosphate synthase [Clostridium botulinum A str.
ATCC 3502]
gi|153930833|ref|YP_001384606.1| undecaprenyl diphosphate synthase [Clostridium botulinum A str.
ATCC 19397]
gi|153937234|ref|YP_001388122.1| undecaprenyl diphosphate synthase [Clostridium botulinum A str.
Hall]
gi|168180689|ref|ZP_02615353.1| undecaprenyl diphosphate synthase [Clostridium botulinum NCTC 2916]
gi|148289872|emb|CAL83980.1| undecaprenyl pyrophosphate synthetase [Clostridium botulinum A str.
ATCC 3502]
gi|152926877|gb|ABS32377.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum A
str. ATCC 19397]
gi|152933148|gb|ABS38647.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum A
str. Hall]
gi|182668409|gb|EDT80388.1| undecaprenyl diphosphate synthase [Clostridium botulinum NCTC 2916]
Length = 252
Score = 313 bits (801), Expect = 2e-83, Method: Composition-based stats.
Identities = 109/237 (45%), Positives = 152/237 (64%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ ++ P HI IIMDGNGRWA R LPR GH+ G+E EIV +G+K LT++AF
Sbjct: 16 NLDMNNIPKHIAIIMDGNGRWAKERSLPRTMGHKAGVETIREIVKECNNLGVKYLTLYAF 75
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP E+S L+ L+ +L+K L +NN+ V IGN L + + L++A ++
Sbjct: 76 STENWKRPKDEVSALMTLLVQYLRKEVKELNENNVIVNAIGNIEKLPEVCIKELEKAYEE 135
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NTGL L +A NY RDEI RA+K +++DI+ G + D++ ++ YL T + DPD
Sbjct: 136 TKDNTGLVLNLALNYGGRDEIIRAVKYMYEDIKVGKIKEEDINEENLSDYLYTKGMLDPD 195
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LIIR GEKR+S+FLLWQ AYSEF + WPDF +E A+ Y RDRRFG +
Sbjct: 196 LIIRPSGEKRISNFLLWQCAYSEFWYSDIKWPDFKKEHLHKAIYDYQNRDRRFGTVK 252
>gi|293374699|ref|ZP_06621007.1| di-trans,poly-cis-decaprenylcistransferase [Turicibacter sanguinis
PC909]
gi|292646613|gb|EFF64615.1| di-trans,poly-cis-decaprenylcistransferase [Turicibacter sanguinis
PC909]
Length = 254
Score = 313 bits (801), Expect = 2e-83, Method: Composition-based stats.
Identities = 98/239 (41%), Positives = 151/239 (63%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
++ + P HI II+DGNGRWA RGLPR AGH++G EI ++G+K LT++A
Sbjct: 14 EQILKAPLPQHIAIILDGNGRWAKKRGLPRTAGHQEGAMNVREITKLCGKLGVKALTVYA 73
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW+RP E+ L+KL F + L +N+I+++VIGN L ++ ++E
Sbjct: 74 FSTENWKRPEEEVKFLMKLPLKFFDEFAPELIENDIRLKVIGNTEDLPTELQEKIRELSH 133
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
QT+ N + L IA NY S+DEI +A++ I +++++G + ++ +I +L T D+P
Sbjct: 134 QTKDNQTMTLTIALNYGSQDEIKQAVQQIAKEVKAGELKVEEITEDVIENHLMTHDLPPL 193
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRT GE+R+S++LLWQ+AY+E F WPDF + A+ Y R+RRFGGL++
Sbjct: 194 DLMIRTSGEQRISNYLLWQLAYAELYFTSVAWPDFKENQLYEAIYDYQKRNRRFGGLTE 252
>gi|284039283|ref|YP_003389213.1| undecaprenyl diphosphate synthase [Spirosoma linguale DSM 74]
gi|283818576|gb|ADB40414.1| undecaprenyl diphosphate synthase [Spirosoma linguale DSM 74]
Length = 245
Score = 312 bits (800), Expect = 3e-83, Method: Composition-based stats.
Identities = 98/242 (40%), Positives = 143/242 (59%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + S+ P HI +IMDGNGRWA +GL R GH I+ E+ AE+G+K LT+
Sbjct: 1 MKEHIDPSNLPQHIAVIMDGNGRWAKRQGLARVFGHNSAIKAVREVTEGCAELGVKYLTL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP E+ L+ L+ ++ +L NN+++ IG+ SL D L EA
Sbjct: 61 YAFSTENWNRPKYEVDALMTLLVRTIRGEIKTLMDNNVRLATIGHTESLPGDCQRELAEA 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+T NTGL L +A +YS R EI A + + D+ G + +D + ++L T +P
Sbjct: 121 MRETSQNTGLTLVLALSYSGRWEILEAARQLAADVRDGKLTPDQIDETTFGQHLSTKGIP 180
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DP+L+IRT GE R+S+F+LWQ+AYSE WPDF +E ++A+ Y R+RRFG S
Sbjct: 181 DPELMIRTSGEMRISNFMLWQLAYSELYMPDVLWPDFRKEHLYNAIVSYQQRERRFGKTS 240
Query: 241 KK 242
++
Sbjct: 241 EQ 242
>gi|329768877|ref|ZP_08260305.1| undecaprenyl pyrophosphate synthase [Gemella sanguinis M325]
gi|328837240|gb|EGF86877.1| undecaprenyl pyrophosphate synthase [Gemella sanguinis M325]
Length = 252
Score = 312 bits (800), Expect = 3e-83, Method: Composition-based stats.
Identities = 105/233 (45%), Positives = 152/233 (65%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ IIMDGNGRWA R +PR GH +G++ +I A+++GIK LT++AFS NW
Sbjct: 19 KTPTHVAIIMDGNGRWAKKRNMPRIKGHYEGMQTVKKITKFASKLGIKYLTLYAFSTENW 78
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+S L+ L + L ++N+KV VIG L ++ + +A +QT+ NT
Sbjct: 79 ARPKEEVSYLMDLPEKMFSSFMPELMESNVKVEVIGVIEKLPENTRKAVSDAIEQTKNNT 138
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL L A NY S+DEI A+K I D++S D+ +++ L T++ PDPDL+IRT
Sbjct: 139 GLKLIFALNYGSKDEIISAVKTIASDVKSDKYSIEDITEETLSRNLFTANTPDPDLLIRT 198
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
GE+R+S+FLLWQ+AYSEF+F WPDF+ E F+++L +Y RDRR+GGL++
Sbjct: 199 SGEQRISNFLLWQIAYSEFIFTKVAWPDFTEEEFYNSLLEYQNRDRRYGGLNE 251
>gi|170757615|ref|YP_001781974.1| undecaprenyl diphosphate synthase [Clostridium botulinum B1 str.
Okra]
gi|169122827|gb|ACA46663.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum
B1 str. Okra]
Length = 252
Score = 312 bits (800), Expect = 3e-83, Method: Composition-based stats.
Identities = 110/237 (46%), Positives = 152/237 (64%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ ++ P HI IIMDGNGRWA R LPR GH+ G+E EIV +G+K LT++AF
Sbjct: 16 NLDMNNIPKHIAIIMDGNGRWAKERSLPRTMGHKAGVETIREIVKECNNLGVKYLTLYAF 75
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP E+S L+ L+ +L+K L +NN+ V IGN L D + L++A ++
Sbjct: 76 STENWKRPKDEVSALMTLLVQYLRKEVKELNENNVIVNTIGNIEKLPDVCIKELEKAYEE 135
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NTGL L +A NY RDEI RA+K +++DI+ G + D++ ++ YL T + DPD
Sbjct: 136 TKDNTGLVLNLALNYGGRDEIIRAVKYMYEDIKVGKIKEEDINEENLSDYLYTKGMLDPD 195
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LIIR GEKR+S+FLLWQ AYSEF + WPDF +E A+ Y RDRRFG +
Sbjct: 196 LIIRPSGEKRISNFLLWQCAYSEFWYSDIKWPDFKKEHLHKAIYDYQNRDRRFGTVK 252
>gi|229006099|ref|ZP_04163787.1| Undecaprenyl pyrophosphate synthetase [Bacillus mycoides Rock1-4]
gi|228755175|gb|EEM04532.1| Undecaprenyl pyrophosphate synthetase [Bacillus mycoides Rock1-4]
Length = 258
Score = 312 bits (799), Expect = 3e-83, Method: Composition-based stats.
Identities = 108/239 (45%), Positives = 156/239 (65%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + P+HI IIMDGNGRWA R +PR AGH +G++V +I A+++ +K LT+
Sbjct: 20 LIEKVKKGHIPEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLDVKVLTL 79
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E+ L+KL + FL L + N++VRVIG + L +++A
Sbjct: 80 YAFSTENWKRPKKEVDYLMKLPEEFLGTFLPELIEENVQVRVIGQKDRLPTHTRRAMEKA 139
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ T+ NTGL L A NY SRDEI A++++ +D E G V S DV+ +++ YL TS +P
Sbjct: 140 MEDTKENTGLILNFALNYGSRDEIVSAVQHMMKDSEEGKVRSEDVNEEMLSSYLMTSSLP 199
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRT GE R+S+F+LWQ+AYSE F YWPDF+ E +A+ + R RRFGG+
Sbjct: 200 DPDLLIRTSGELRISNFMLWQIAYSELWFTDVYWPDFTEEHLLNAITDFQHRGRRFGGV 258
>gi|153940911|ref|YP_001391729.1| undecaprenyl diphosphate synthase [Clostridium botulinum F str.
Langeland]
gi|152936807|gb|ABS42305.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum F
str. Langeland]
gi|295319755|gb|ADG00133.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum F
str. 230613]
Length = 252
Score = 312 bits (799), Expect = 3e-83, Method: Composition-based stats.
Identities = 109/237 (45%), Positives = 152/237 (64%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ ++ P HI IIMDGNGRWA R LPR GH+ G+E EIV +G+K LT++AF
Sbjct: 16 NLDMNNIPKHIAIIMDGNGRWAKERSLPRTMGHKAGVETIREIVKECNNLGVKYLTLYAF 75
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP E+S L+ L+ +L+K L +NN+ V IGN L + + L++A ++
Sbjct: 76 STENWKRPKDEVSALMTLLVQYLRKEVKELNENNVIVNTIGNIEKLPEVCIKELEKAYEE 135
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NTGL L +A NY RDEI RA+K +++DI+ G + D++ ++ YL T + DPD
Sbjct: 136 TKDNTGLVLNLALNYGGRDEIIRAVKYMYEDIKVGKIKEEDINEENLSDYLYTKGMLDPD 195
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LIIR GEKR+S+FLLWQ AYSEF + WPDF +E A+ Y RDRRFG +
Sbjct: 196 LIIRPSGEKRISNFLLWQCAYSEFWYSDIKWPDFKKEHLHKAIYDYQNRDRRFGTVK 252
>gi|228998599|ref|ZP_04158186.1| Undecaprenyl pyrophosphate synthetase [Bacillus mycoides Rock3-17]
gi|228761067|gb|EEM10026.1| Undecaprenyl pyrophosphate synthetase [Bacillus mycoides Rock3-17]
Length = 257
Score = 312 bits (799), Expect = 4e-83, Method: Composition-based stats.
Identities = 108/239 (45%), Positives = 156/239 (65%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + P+HI IIMDGNGRWA R +PR AGH +G++V +I A+++ +K LT+
Sbjct: 19 LIEKVKKGHIPEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLDVKVLTL 78
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E+ L+KL + FL L + N++VRVIG + L +++A
Sbjct: 79 YAFSTENWKRPKKEVDYLMKLPEEFLGAFLPELIEENVQVRVIGQKDRLPTHTRRAMEKA 138
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ T+ NTGL L A NY SRDEI A++++ +D E G V S DV+ +++ YL TS +P
Sbjct: 139 MEDTKENTGLILNFALNYGSRDEIVSAVQHMMKDSEEGKVRSEDVNEEMLSSYLMTSSLP 198
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRT GE R+S+F+LWQ+AYSE F YWPDF+ E +A+ + R RRFGG+
Sbjct: 199 DPDLLIRTSGELRISNFMLWQIAYSELWFTDVYWPDFTEEHLLNAITDFQHRGRRFGGV 257
>gi|168184637|ref|ZP_02619301.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum
Bf]
gi|182672276|gb|EDT84237.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum
Bf]
Length = 252
Score = 311 bits (798), Expect = 4e-83, Method: Composition-based stats.
Identities = 109/237 (45%), Positives = 152/237 (64%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ ++ P HI IIMDGNGRWA R LPR GH+ G+E EIV +G+K LT++AF
Sbjct: 16 NLDMNNIPKHIAIIMDGNGRWAKERSLPRTMGHKAGVETIREIVKECNNLGVKYLTLYAF 75
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP E+S L+ L+ +L+K L +NN+ V IGN L + + L++A ++
Sbjct: 76 STENWKRPKDEVSALMTLLVQYLRKEVKELNENNVIVNTIGNIEKLPEVCIKELEKAYEE 135
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NTGL L +A NY RDEI RA+K +++DI+ G + D++ ++ YL T + DPD
Sbjct: 136 TKNNTGLVLNLALNYGGRDEIIRAVKYMYEDIKVGKIKEEDINEENLSDYLYTKSMLDPD 195
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LIIR GEKR+S+FLLWQ AYSEF + WPDF +E A+ Y RDRRFG +
Sbjct: 196 LIIRPSGEKRISNFLLWQCAYSEFWYSDIKWPDFKKEHLHKAIYDYQNRDRRFGTVK 252
>gi|228992551|ref|ZP_04152478.1| Undecaprenyl pyrophosphate synthetase [Bacillus pseudomycoides DSM
12442]
gi|228767185|gb|EEM15821.1| Undecaprenyl pyrophosphate synthetase [Bacillus pseudomycoides DSM
12442]
Length = 258
Score = 311 bits (798), Expect = 4e-83, Method: Composition-based stats.
Identities = 108/239 (45%), Positives = 156/239 (65%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + P+HI IIMDGNGRWA R +PR AGH +G++V +I A+++ +K LT+
Sbjct: 20 LIEKVKKGHIPEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLDVKVLTL 79
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E+ L+KL + FL L + N++VRVIG + L +++A
Sbjct: 80 YAFSTENWKRPKKEVDYLMKLPEEFLGAFLPELIEENVQVRVIGQKDRLPTHTRRAMEKA 139
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ T+ NTGL L A NY SRDEI A++++ +D E G V S DV+ +++ YL TS +P
Sbjct: 140 MEDTKENTGLILNFALNYGSRDEIVSAVQHMMKDSEEGKVRSEDVNEEMLSSYLMTSSLP 199
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRT GE R+S+F+LWQ+AYSE F YWPDF+ E +A+ + R RRFGG+
Sbjct: 200 DPDLLIRTSGELRISNFMLWQIAYSELWFTDVYWPDFTEEHLLNAITDFQHRGRRFGGV 258
>gi|325840623|ref|ZP_08167104.1| di-trans,poly-cis-decaprenylcistransferase [Turicibacter sp. HGF1]
gi|325490272|gb|EGC92605.1| di-trans,poly-cis-decaprenylcistransferase [Turicibacter sp. HGF1]
Length = 254
Score = 311 bits (798), Expect = 4e-83, Method: Composition-based stats.
Identities = 97/239 (40%), Positives = 151/239 (63%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
++ + P HI II+DGNGRWA RGLPR AGH++G EI ++G+K LT++A
Sbjct: 14 EQILKAPLPQHIAIILDGNGRWAKKRGLPRTAGHQEGAMNVREITKLCGKLGVKALTVYA 73
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW+RP E+ L+KL F + L +N+I++++IGN L ++ ++E
Sbjct: 74 FSTENWKRPEEEVKFLMKLPLKFFDEFAPELIENDIRLKIIGNTEDLPTELQEKIRELSH 133
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
QT+ N + L IA NY S+DEI +A++ I +++++G + ++ +I +L T D+P
Sbjct: 134 QTKDNQTMTLTIALNYGSQDEIKQAVQQIAKEVKAGELKVEEITEDVIENHLMTHDLPPL 193
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRT GE+R+S++LLWQ+AY+E F WPDF + A+ Y R+RRFGGL++
Sbjct: 194 DLMIRTSGEQRISNYLLWQLAYAELYFTSVAWPDFKENQLYEAIYDYQKRNRRFGGLTE 252
>gi|146299451|ref|YP_001194042.1| undecaprenyl diphosphate synthase [Flavobacterium johnsoniae UW101]
gi|146153869|gb|ABQ04723.1| undecaprenyl diphosphate synthase [Flavobacterium johnsoniae UW101]
Length = 246
Score = 311 bits (797), Expect = 5e-83, Method: Composition-based stats.
Identities = 96/242 (39%), Positives = 150/242 (61%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ S+ S+ P H+ IIMDGNGRWA +G R GH G + + + A++GI+ LT+
Sbjct: 3 LLDSIDQSNLPKHLAIIMDGNGRWAKQQGFLRAFGHENGTKSVKKTITTCAKLGIEYLTL 62
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP E+ L+K++ + LKK +L++NNI++ IGN L L +
Sbjct: 63 YAFSTENWNRPKLEVEALMKILINSLKKELVTLQENNIRLNAIGNLDKLPKTAQKELLDV 122
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
D+T+ NT L L +A +Y SR+E+ A++ I +++ + +D S+I ++L T ++P
Sbjct: 123 IDKTKNNTRLTLTLALSYGSREELVNAVRAISDKVKNNIISIDTIDDSIINEHLYTQNLP 182
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
D DL+IRT GE R+S+FLLWQ+AY+E F WPDF + + A+ Y R+RRFG S
Sbjct: 183 DVDLLIRTSGEHRISNFLLWQIAYAELYFTNVLWPDFKDQDLYEAIISYQKRERRFGKTS 242
Query: 241 KK 242
++
Sbjct: 243 EQ 244
>gi|229086376|ref|ZP_04218552.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus Rock3-44]
gi|228696892|gb|EEL49701.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus Rock3-44]
Length = 258
Score = 311 bits (796), Expect = 6e-83, Method: Composition-based stats.
Identities = 108/239 (45%), Positives = 156/239 (65%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + P+HI IIMDGNGRWA R +PR AGH +G++V +I A+++ +K LT+
Sbjct: 20 LIEEVKKGYIPEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLDVKVLTL 79
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E+ L+KL + FL L + N++VRVIG + L +++A
Sbjct: 80 YAFSTENWKRPKKEVDYLMKLPEEFLGTFLPDLIEENVQVRVIGQKDRLPTHTRRAMEKA 139
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ T+ NTGL L A NY SRDEI A++++ +D E G V S D++ +I+ YL TS +P
Sbjct: 140 MEDTKENTGLILNFALNYGSRDEIVSAVQHMMRDSEEGKVRSEDINEEMISSYLMTSSLP 199
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRT GE R+S+F+LWQ+AYSE F YWPDF+ E +A+ + R RRFGG+
Sbjct: 200 DPDLLIRTSGELRISNFMLWQIAYSELWFTDVYWPDFTEEHLLNAITDFQHRGRRFGGV 258
>gi|152976189|ref|YP_001375706.1| undecaprenyl diphosphate synthase [Bacillus cereus subsp. cytotoxis
NVH 391-98]
gi|152024941|gb|ABS22711.1| undecaprenyl diphosphate synthase [Bacillus cytotoxicus NVH 391-98]
Length = 258
Score = 311 bits (796), Expect = 7e-83, Method: Composition-based stats.
Identities = 108/239 (45%), Positives = 155/239 (64%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ P+HI IIMDGNGRWA R +PR AGH +G++V +I A+++ +K LT+
Sbjct: 20 LIEEAKKGHIPEHIAIIMDGNGRWAKKRAMPRIAGHHEGMQVVKKITKFASKLDVKVLTL 79
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E+ L+KL + FL L + N++VRVIG + L +++A
Sbjct: 80 YAFSTENWKRPKKEVEYLMKLPEEFLGTFLPELIEENVQVRVIGQKDRLPMHTRRAMEKA 139
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ T+ NTGL L A NY SRDEI A++++ +D E G V S D++ +I+ YL TS +P
Sbjct: 140 MEDTKENTGLILNFALNYGSRDEIVSAVQHMMKDSEEGKVRSEDINEEMISSYLMTSALP 199
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRT GE R+S+F+LWQ+AY+E F YWPDF+ E HA+ + R RRFGG+
Sbjct: 200 DPDLLIRTSGEVRISNFMLWQIAYTELWFTNVYWPDFTEEHLLHAITDFQQRGRRFGGV 258
>gi|89889538|ref|ZP_01201049.1| undecaprenyl pyrophosphate synthetase [Flavobacteria bacterium
BBFL7]
gi|89517811|gb|EAS20467.1| undecaprenyl pyrophosphate synthetase [Flavobacteria bacterium
BBFL7]
Length = 244
Score = 311 bits (796), Expect = 7e-83, Method: Composition-based stats.
Identities = 102/238 (42%), Positives = 147/238 (61%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + + P HI +IMDGNGRWA +GL R GH KG + E V AE+GIKNLT++AFS
Sbjct: 6 LHTHNIPQHIAVIMDGNGRWAKKQGLMRVRGHEKGAKAVRETVETCAELGIKNLTLYAFS 65
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+ L++L+ S LKK +L+KNNI ++ +G+ L L+E T
Sbjct: 66 TENWKRPKLEVDTLMRLLVSSLKKELPTLQKNNISLKAVGSLELLPKTAQKELQEVITAT 125
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N +NL +A +Y SR+E+ IKN+ ++ G + +++ I L T+ +PD DL
Sbjct: 126 ASNDHMNLTLALSYGSREELITVIKNVASKVKEGEIEVDNINQDTINSLLYTNYMPDVDL 185
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IRT GE+R+S+FLLWQ+AY+E F WPDF +E AL Y R+RRFG S++
Sbjct: 186 LIRTSGEQRISNFLLWQIAYAELYFTDVLWPDFRKEHLIEALKNYQDRERRFGKTSEQ 243
>gi|212639531|ref|YP_002316051.1| undecaprenyl pyrophosphate synthase [Anoxybacillus flavithermus
WK1]
gi|212561011|gb|ACJ34066.1| Undecaprenyl pyrophosphate synthase [Anoxybacillus flavithermus
WK1]
Length = 254
Score = 311 bits (796), Expect = 7e-83, Method: Composition-based stats.
Identities = 105/237 (44%), Positives = 158/237 (66%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+++ P H+ IIMDGNGRWA R LPR AGH +G++ +I A E+G+K LT++A
Sbjct: 18 EAILQGPIPAHVAIIMDGNGRWAKKRALPRMAGHYEGMQTVRKITRFANELGVKVLTLYA 77
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW+RP +E+ L++L + FL L + N++VRV+G++ L L + +A +
Sbjct: 78 FSTENWKRPKTEVDYLMQLPEQFLNTFLPELIEENVQVRVMGHKDQLPLHTLRAVDKAIE 137
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
+T+ NTGL L A NY SR EI A++ + D+++G++ + DV+ L YL T+D+PDP
Sbjct: 138 ETKQNTGLILNFALNYGSRAEIVHAVQKLVDDVQNGAIQASDVNEQLFHSYLMTNDLPDP 197
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DL+IRT GE RLS+F+LWQ+AY+EF F WPDF+ + F A++++ R RRFGG+
Sbjct: 198 DLLIRTSGEIRLSNFMLWQLAYTEFWFTDVLWPDFTEQHFLQAVHEFQQRSRRFGGV 254
>gi|329767298|ref|ZP_08258824.1| di-trans,poly-cis-decaprenylcistransferase [Gemella haemolysans
M341]
gi|328836220|gb|EGF85890.1| di-trans,poly-cis-decaprenylcistransferase [Gemella haemolysans
M341]
Length = 254
Score = 311 bits (796), Expect = 8e-83, Method: Composition-based stats.
Identities = 106/233 (45%), Positives = 152/233 (65%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ IIMDGNGRWA R +PR GH +G++ +I A+++G+K LT++AFS NW
Sbjct: 21 KIPTHVAIIMDGNGRWAKKRNMPRIKGHYEGMQTVKKITKYASKLGVKYLTLYAFSTENW 80
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+S L+ L + L +NN+KV VIG L ++ + +A +QT+ NT
Sbjct: 81 ARPKEEVSYLMDLPEKMFSSFMPELMENNVKVEVIGVVEKLPENTRKAVNDAIEQTKNNT 140
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL L A NY S+DE+ RAIK I +D++ + ++ ++ L TS+ PDPDL+IRT
Sbjct: 141 GLKLIFALNYGSKDEMLRAIKQIAKDVQDNKYSAEEISEEHVSANLFTSNTPDPDLLIRT 200
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
GE+R+S+FLLWQ+AYSEF+F WPDF+ + F+ AL +Y RDRRFGGL++
Sbjct: 201 SGEQRISNFLLWQIAYSEFLFTKVAWPDFNEDEFYQALLEYQSRDRRFGGLNE 253
>gi|86140715|ref|ZP_01059274.1| Undecaprenyl pyrophosphate synthase [Leeuwenhoekiella blandensis
MED217]
gi|85832657|gb|EAQ51106.1| Undecaprenyl pyrophosphate synthase [Leeuwenhoekiella blandensis
MED217]
Length = 246
Score = 311 bits (796), Expect = 8e-83, Method: Composition-based stats.
Identities = 100/241 (41%), Positives = 154/241 (63%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + P HI +IMDGNGRWA +GL R GH+KG + E + A AE+G+ +T++
Sbjct: 4 LDEIDQHKLPKHIAVIMDGNGRWAKNQGLLRVKGHKKGTKAVRETIEACAELGVPFVTLY 63
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+ L+ L+ S LKK +L+ NNI + IG+ SL + LKE
Sbjct: 64 AFSTENWNRPKLEVDTLMNLLVSSLKKEIKTLQDNNISLSAIGSLQSLPEKAQRELKEVM 123
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T+ N+ L L +A +Y +R+E+ + I++I ++ + H ++ S+I ++L T D+PD
Sbjct: 124 EKTKNNSRLRLTLALSYGAREELVKTIQDISLKVKKNLISPHLINESVIKEHLYTHDMPD 183
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRT GE+R+S+FLLWQ+AY+E F P WPDF+R+ + A+ Y R+RRFG S+
Sbjct: 184 VDLLIRTSGEQRISNFLLWQIAYAELYFTPVLWPDFTRKHLYEAIYNYQKRERRFGKTSE 243
Query: 242 K 242
+
Sbjct: 244 Q 244
>gi|317495511|ref|ZP_07953879.1| di-trans,poly-cis-decaprenylcistransferase [Gemella moribillum
M424]
gi|316914325|gb|EFV35803.1| di-trans,poly-cis-decaprenylcistransferase [Gemella moribillum
M424]
Length = 254
Score = 310 bits (795), Expect = 9e-83, Method: Composition-based stats.
Identities = 109/231 (47%), Positives = 149/231 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R +PR GH +G++ +I A+++GI+ LT++AFS NW R
Sbjct: 23 PTHVAIIMDGNGRWAKKRNMPRVKGHYEGMQTVKKITKYASKLGIQYLTLYAFSTENWAR 82
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L + L +NN+KV VIG L ++ +++A +QT+ NTGL
Sbjct: 83 PKEEVSYLMDLPEKMFTSFMPELMENNVKVEVIGVVEKLPENTRKAVEDAIEQTKNNTGL 142
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L A NY S+DEI A+K I Q + ++D LI+ L T D PDPDL+IRT G
Sbjct: 143 KLIFALNYGSKDEIVTAVKRIAQGATNNEYKVEEIDEQLISDNLFTKDTPDPDLLIRTSG 202
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E+R+S+FLLWQ+AYSEF+F WPDF E F+ AL +Y RDRRFGGL++
Sbjct: 203 EQRISNFLLWQIAYSEFIFTKVAWPDFVEEEFYKALLEYQSRDRRFGGLNE 253
>gi|323701851|ref|ZP_08113521.1| undecaprenyl diphosphate synthase [Desulfotomaculum nigrificans DSM
574]
gi|323533155|gb|EGB23024.1| undecaprenyl diphosphate synthase [Desulfotomaculum nigrificans DSM
574]
Length = 262
Score = 310 bits (795), Expect = 9e-83, Method: Composition-based stats.
Identities = 103/242 (42%), Positives = 147/242 (60%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + P HI IIMDGNGRWA RG PR GHR G+E +V A +E+ +K LT
Sbjct: 21 LLQLIDRQRLPKHIAIIMDGNGRWAQRRGWPRSFGHRAGVESLRGVVKACSELDVKFLTC 80
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E+S L+ L+ +L+K L +NN+K+ IG L L +A
Sbjct: 81 YAFSTENWKRPEEEVSFLMGLLVEYLEKEMDELHQNNVKIYAIGGLHELPQRAQDALNKA 140
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+T NTGL L +A NY R E+++AI I + + GS+ +++ L+++ L T+ +P
Sbjct: 141 FTKTANNTGLTLNLALNYGGRSELTQAIVKIAKAVADGSIQLSEINEQLVSENLFTAGMP 200
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IR G+ R+S+FLLWQ+AY+EF WPDF + A+ Y R+RRFGGL
Sbjct: 201 DPDLLIRPSGDFRISNFLLWQLAYTEFWLSDVMWPDFKKIHLLQAIVDYQQRERRFGGLK 260
Query: 241 KK 242
KK
Sbjct: 261 KK 262
>gi|226949784|ref|YP_002804875.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum
A2 str. Kyoto]
gi|226842308|gb|ACO84974.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum
A2 str. Kyoto]
Length = 252
Score = 310 bits (795), Expect = 9e-83, Method: Composition-based stats.
Identities = 109/237 (45%), Positives = 151/237 (63%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ ++ P HI IIMDGNGRWA R LPR GH+ G+E EIV +G+K LT++AF
Sbjct: 16 NLDMNNIPKHIAIIMDGNGRWAKERSLPRTMGHKAGVETIREIVKECNNLGVKYLTLYAF 75
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP E+S L+ L+ +L+K L +NN+ V IGN L + + L++A ++
Sbjct: 76 STENWKRPKDEVSALMTLLVQYLRKEVKELNENNVIVNAIGNIEKLPEVCIKELEKAYEE 135
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NTGL L +A NY RDEI RA+K +++DI+ G + D++ + YL T + DPD
Sbjct: 136 TKDNTGLVLNLALNYGGRDEIIRAVKYMYEDIKVGKIKEEDINEENLPDYLYTKGMLDPD 195
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LIIR GEKR+S+FLLWQ AYSEF + WPDF +E A+ Y RDRRFG +
Sbjct: 196 LIIRPSGEKRISNFLLWQCAYSEFWYSDIKWPDFKKEHLHKAIYDYQNRDRRFGTVK 252
>gi|118443581|ref|YP_878218.1| undecaprenyl diphosphate synthase [Clostridium novyi NT]
gi|118134037|gb|ABK61081.1| undecaprenyl diphosphate synthase [Clostridium novyi NT]
Length = 252
Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats.
Identities = 109/239 (45%), Positives = 154/239 (64%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ S+ P+HI IIMDGNGRWA R LPR GH+ G+E EIV +++ +K LT++
Sbjct: 14 IISIDMDRIPEHIAIIMDGNGRWAKKRKLPRTVGHKAGVETIREIVKECSKLNVKALTLY 73
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E+S L+KL+ +LKK L + N+ +R IG+ L L A
Sbjct: 74 AFSTENWKRPKDEVSALMKLLVEYLKKELKELHEENVVIRYIGDISKLPKICQDELINAS 133
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T+ NTGL L +A NY R+EI AIK+I + +++ ++ H++D S I ++L T ++ D
Sbjct: 134 NRTQNNTGLILNLALNYGGRNEIVNAIKSIAEKVKNNTLQIHEIDESTIEEFLYTKNLKD 193
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
PD+IIRT GE+RLS+FLLWQ AYSEF + WPDF ++ A+ Y RDRRFGGL
Sbjct: 194 PDIIIRTAGEQRLSNFLLWQCAYSEFWYTDIKWPDFKKQDLLRAIYDYQNRDRRFGGLK 252
>gi|229019018|ref|ZP_04175859.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus AH1273]
gi|229025263|ref|ZP_04181683.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus AH1272]
gi|228736016|gb|EEL86591.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus AH1272]
gi|228742258|gb|EEL92417.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus AH1273]
Length = 258
Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats.
Identities = 108/239 (45%), Positives = 157/239 (65%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+V + P+HI IIMDGNGRWA R +PR AGH +G++V +I A+++G+K LT+
Sbjct: 20 LVEEVKKGYIPEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLGVKVLTL 79
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E+ L+KL + FL L + N++VRVIG + L +++A
Sbjct: 80 YAFSTENWKRPKKEVDYLMKLPEEFLGTFLPELIEENVQVRVIGQKDRLPTHTRRAMEKA 139
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ T+ NTGL L A NY SRDEI A++++ +D E G + + +V +I+ YL TS +P
Sbjct: 140 MEDTKENTGLILNFALNYGSRDEIVSAVQHMMKDSEEGKIRAEEVSEEMISSYLMTSSLP 199
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DP+L+IRT GE R+S+F+LWQ+AYSEF F YWPDF+ E +A+ + R RRFGG+
Sbjct: 200 DPELLIRTSGELRISNFMLWQIAYSEFWFTDVYWPDFTEEHLLNAITDFQHRGRRFGGV 258
>gi|163786496|ref|ZP_02180944.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase)
[Flavobacteriales bacterium ALC-1]
gi|159878356|gb|EDP72412.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase)
[Flavobacteriales bacterium ALC-1]
Length = 246
Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats.
Identities = 101/242 (41%), Positives = 148/242 (61%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P+H+ IIMDGNGRWA +G R GH G + + V A+AE+GIKNLT+
Sbjct: 3 LKEQIHKEKLPNHVAIIMDGNGRWAKQQGFMRVIGHESGTKSVRQTVEASAELGIKNLTL 62
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP E+ L+KL+ LKK +L+ NNIK+ IG L L +
Sbjct: 63 YAFSTENWNRPKLEVQTLMKLLVKSLKKEIKTLQDNNIKLAAIGCLDDLPKKAHQELLDV 122
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
++T+ NT + L +A +Y SR+EI +K + +++ + +D S+I K+L T ++P
Sbjct: 123 IEKTKNNTNMTLTLALSYGSREEIVNVVKELSLKVKNNIISPESIDESIINKHLYTQNLP 182
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
D DL+IRT GE+R+S+FLLWQ+AY+E F WPDF +E + AL Y R+RRFG S
Sbjct: 183 DVDLLIRTSGEQRISNFLLWQIAYAELYFTDILWPDFKKENLYEALISYQNRERRFGKTS 242
Query: 241 KK 242
++
Sbjct: 243 EQ 244
>gi|78043658|ref|YP_360601.1| undecaprenyl diphosphate synthase [Carboxydothermus
hydrogenoformans Z-2901]
gi|77995773|gb|ABB14672.1| undecaprenyl diphosphate synthase [Carboxydothermus
hydrogenoformans Z-2901]
Length = 255
Score = 310 bits (794), Expect = 1e-82, Method: Composition-based stats.
Identities = 98/239 (41%), Positives = 142/239 (59%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
++ + P HI IIMDGNGRWA RG+PR GHR G+E +V A++ + LT++
Sbjct: 15 ISDLDFRKMPRHIAIIMDGNGRWAKKRGMPRYFGHRAGVETVRRVVKFCAKLNVPYLTLY 74
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP E++ L+ L+ +++K L + +++ VIG L + L +
Sbjct: 75 AFSTENWRRPQEEVNVLMNLLVEYIEKETDELNREGVRLTVIGEISELPEKARIALAQGI 134
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T N+ LNL +A NY R EI A + I +I++G + +D + A YL T + PD
Sbjct: 135 EKTCHNSRLNLILALNYGGRREIVEAARKIAYEIKNGKLSPEQIDEKVFANYLYTKEFPD 194
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
PDL+IR GE R+S+FLLWQ+AYSE WPDFS E A+ Y R+RRFGG++
Sbjct: 195 PDLLIRPSGEIRISNFLLWQIAYSEIWLTDVLWPDFSEEHLLQAIKDYQKRERRFGGVN 253
>gi|134299820|ref|YP_001113316.1| undecaprenyl diphosphate synthase [Desulfotomaculum reducens MI-1]
gi|134052520|gb|ABO50491.1| Undecaprenyl pyrophosphate synthetase [Desulfotomaculum reducens
MI-1]
Length = 263
Score = 309 bits (793), Expect = 1e-82, Method: Composition-based stats.
Identities = 106/242 (43%), Positives = 147/242 (60%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ S+ + P HI IIMDGNGRWA RG+PR GHR G+E IV +E+GI LT
Sbjct: 22 LLQSIDRNKLPQHIAIIMDGNGRWAQRRGMPRSLGHRAGVESLRNIVKLCSEIGIGYLTC 81
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E+S L+ L+ +L+K L KNN++V IG L L+ A
Sbjct: 82 YAFSTENWKRPQKEVSYLMDLLVEYLEKEVVELHKNNVRVNAIGRLEELPQRAQEALQAA 141
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+T+ NTGL L +A NY R EI+ A+ I ++S + +++ LI L T+ +P
Sbjct: 142 FQKTKNNTGLTLNLALNYGGRTEITDAVIKIANMVKSNEMEVANINDKLICDSLYTAGMP 201
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DP+L+IR GE R+S+FLLWQ+AY+EF WPDF R A+ + R+RRFGGL+
Sbjct: 202 DPELLIRPSGECRISNFLLWQLAYTEFWLADVMWPDFQRYHLLQAIIGFQRRERRFGGLN 261
Query: 241 KK 242
KK
Sbjct: 262 KK 263
>gi|149369709|ref|ZP_01889561.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase)
[unidentified eubacterium SCB49]
gi|149357136|gb|EDM45691.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase)
[unidentified eubacterium SCB49]
Length = 245
Score = 309 bits (792), Expect = 2e-82, Method: Composition-based stats.
Identities = 97/239 (40%), Positives = 150/239 (62%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P HI IIMDGNGRWA +GL R GH+ G + E V A++ + LT++AF
Sbjct: 6 QINKEKLPQHIAIIMDGNGRWAKQKGLLRAIGHQNGSKAVRETVETCAKLNVPYLTLYAF 65
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP E+ L+KL+ S LKK +L+ N+IK+ IGN SL L++ +
Sbjct: 66 STENWKRPKLEVETLMKLLVSSLKKEIKTLQDNDIKLNAIGNLESLPPKAQRELQDVISK 125
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N+ + L +A +Y +R+EI++ I+ I +++ + D+D L+ +L T+++PD D
Sbjct: 126 TKQNSRMTLTLALSYGAREEITKTIREISLKVKNNLISPLDIDERLVNDHLYTNNLPDVD 185
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRT GE+R+S+FLLWQ+AY+E F WPDF+++ F A+ Y R+RRFG S++
Sbjct: 186 LLIRTSGEQRISNFLLWQIAYAELSFTETLWPDFTKKHLFEAILNYQNRERRFGKTSEQ 244
>gi|322806697|emb|CBZ04266.1| undecaprenyl pyrophosphate synthetase [Clostridium botulinum H04402
065]
Length = 252
Score = 309 bits (792), Expect = 2e-82, Method: Composition-based stats.
Identities = 108/237 (45%), Positives = 150/237 (63%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ ++ P HI IIMDGNGRWA R LPR GH+ G+E EIV +G+K LT++AF
Sbjct: 16 NLDMNNIPKHIAIIMDGNGRWAKERSLPRTMGHKAGVETIREIVKECNNLGVKYLTLYAF 75
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP E+ L+ L+ +L+K L +NN+ V IGN L + + L++A ++
Sbjct: 76 STENWKRPKDEVRALMTLLVQYLRKEVKELNENNVIVNAIGNIEKLPEVCIKELEKAYEE 135
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NTGL L +A NY RDEI RA+K +++DI+ G + D++ + YL T + DPD
Sbjct: 136 TKDNTGLVLNLALNYGGRDEIIRAVKYMYEDIKVGKIKEEDINEENLPDYLYTKGMLDPD 195
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LIIR GEKR+S+FLLWQ AYSEF + WPDF +E A+ Y RDRRFG +
Sbjct: 196 LIIRPSGEKRISNFLLWQCAYSEFWYSDIKWPDFKKEHLHKAIYDYQNRDRRFGTVK 252
>gi|18310678|ref|NP_562612.1| undecaprenyl diphosphate synthase [Clostridium perfringens str. 13]
gi|110801370|ref|YP_696383.1| undecaprenyl diphosphate synthase [Clostridium perfringens ATCC
13124]
gi|110803535|ref|YP_698983.1| undecaprenyl pyrophosphate synthase [Clostridium perfringens SM101]
gi|168208113|ref|ZP_02634118.1| undecaprenyl diphosphate synthase [Clostridium perfringens E str.
JGS1987]
gi|168211416|ref|ZP_02637041.1| undecaprenyl diphosphate synthase [Clostridium perfringens B str.
ATCC 3626]
gi|168214471|ref|ZP_02640096.1| undecaprenyl diphosphate synthase [Clostridium perfringens CPE str.
F4969]
gi|168216983|ref|ZP_02642608.1| undecaprenyl diphosphate synthase [Clostridium perfringens NCTC
8239]
gi|169342721|ref|ZP_02863762.1| undecaprenyl diphosphate synthase [Clostridium perfringens C str.
JGS1495]
gi|182627140|ref|ZP_02954855.1| undecaprenyl diphosphate synthase [Clostridium perfringens D str.
JGS1721]
gi|42559847|sp|Q8XJQ9|UPPS_CLOPE RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|18145359|dbj|BAB81402.1| undecaprenyl pyrophosphate synthase [Clostridium perfringens str.
13]
gi|110676017|gb|ABG85004.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium perfringens
ATCC 13124]
gi|110684036|gb|ABG87406.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium perfringens
SM101]
gi|169299227|gb|EDS81297.1| undecaprenyl diphosphate synthase [Clostridium perfringens C str.
JGS1495]
gi|170660606|gb|EDT13289.1| undecaprenyl diphosphate synthase [Clostridium perfringens E str.
JGS1987]
gi|170710581|gb|EDT22763.1| undecaprenyl diphosphate synthase [Clostridium perfringens B str.
ATCC 3626]
gi|170714048|gb|EDT26230.1| undecaprenyl diphosphate synthase [Clostridium perfringens CPE str.
F4969]
gi|177907477|gb|EDT70143.1| undecaprenyl diphosphate synthase [Clostridium perfringens D str.
JGS1721]
gi|182380984|gb|EDT78463.1| undecaprenyl diphosphate synthase [Clostridium perfringens NCTC
8239]
Length = 253
Score = 309 bits (792), Expect = 2e-82, Method: Composition-based stats.
Identities = 104/236 (44%), Positives = 150/236 (63%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
++ P HI IIMDGNGRWA RGLPR GHR G++ IV ++G+K LT++AFS
Sbjct: 18 LIEDKMPKHIAIIMDGNGRWAKKRGLPRTMGHRAGVKTIKTIVKECDKLGVKYLTLYAFS 77
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E++ L+KL+ F+K L +N ++V+ IG+ ++ + A ++T
Sbjct: 78 TENWKRPEDEVNALMKLVVEFIKNEIDELHQNGVRVQTIGDLSRFPEEPKKAILWAMEKT 137
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NTG+ L +A NY R+EI R IK++ +D+++G + D++ + YL T +PDPDL
Sbjct: 138 KDNTGVVLSLALNYGGRNEIVRGIKSVIEDVKAGKISIDDINEDMFNDYLYTKGMPDPDL 197
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IIR GE+RLS+FLLWQ AYSEF + WPDF+ E A+ Y RDRRFGG+
Sbjct: 198 IIRPSGEQRLSNFLLWQCAYSEFWYSQINWPDFNGEDLRKAIFDYQNRDRRFGGIK 253
>gi|121533726|ref|ZP_01665553.1| undecaprenyl diphosphate synthase [Thermosinus carboxydivorans
Nor1]
gi|121307717|gb|EAX48632.1| undecaprenyl diphosphate synthase [Thermosinus carboxydivorans
Nor1]
Length = 261
Score = 309 bits (791), Expect = 3e-82, Method: Composition-based stats.
Identities = 106/240 (44%), Positives = 147/240 (61%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ S+ +S P HI IIMDGNGRWA RGLPR GH G E IV AAE+G+K LT
Sbjct: 19 LQNSLDPNSIPAHIAIIMDGNGRWAQKRGLPRTLGHHAGAETLRNIVKTAAELGVKVLTA 78
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E+ L++L+ +L L NN+++R IG L + + +A
Sbjct: 79 YAFSTENWKRPAEEVDVLMRLLSDYLDSEIDELDSNNVQIRFIGKTDELAPSLYHKVTQA 138
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ +T NTGL L +A NY R E++RA++ I + + +G + ++ I +L T+D+P
Sbjct: 139 QKRTSKNTGLILNLAVNYGGRAELTRAVQLIARKVAAGVIAPDNISEQTIQDHLYTADLP 198
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IR G+ RLS+FLLWQ AY+EF F WPDF+ + A+ Y RDRRFGGL
Sbjct: 199 DPDLLIRPSGDLRLSNFLLWQSAYTEFWFTNTNWPDFTPDHLIQAIADYQRRDRRFGGLK 258
>gi|255524237|ref|ZP_05391196.1| undecaprenyl diphosphate synthase [Clostridium carboxidivorans P7]
gi|296185358|ref|ZP_06853768.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium
carboxidivorans P7]
gi|255512062|gb|EET88343.1| undecaprenyl diphosphate synthase [Clostridium carboxidivorans P7]
gi|296050192|gb|EFG89616.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium
carboxidivorans P7]
Length = 257
Score = 309 bits (791), Expect = 3e-82, Method: Composition-based stats.
Identities = 111/237 (46%), Positives = 153/237 (64%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ ++ P HI IIMDGNGRWA R LPR GH+ G+E EIV A+ +G+K LT++AF
Sbjct: 21 EIDMNNIPKHIAIIMDGNGRWARERNLPRTMGHKAGVEAIREIVKEASTLGVKYLTLYAF 80
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP E+ L+ L+ +LKK F L NN+ ++ IG+ L L +A +
Sbjct: 81 STENWKRPSDEVGALMNLLVQYLKKEFKELNNNNVIIKHIGDISKLPSACQKELIDAYNN 140
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NTGL L +A NY R+EI RA I++DI+S + +D ++I+KY+ TS++PDPD
Sbjct: 141 TKNNTGLTLNLALNYGGRNEIVRAFNLIYEDIKSHKLSEECIDETVISKYMYTSNMPDPD 200
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LIIR GE+RLS+FLLWQ AYSEF + WPDF ++ A+ Y RDRRFGG+
Sbjct: 201 LIIRPSGEQRLSNFLLWQCAYSEFWYSNIKWPDFGKKDLHKAIYDYQNRDRRFGGVK 257
>gi|228986966|ref|ZP_04147092.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228772744|gb|EEM21184.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 258
Score = 308 bits (790), Expect = 4e-82, Method: Composition-based stats.
Identities = 108/239 (45%), Positives = 156/239 (65%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+V + P+HI IIMDGNGRWA R +PR AGH +G++V +I A+++ +K LT+
Sbjct: 20 LVEEVKKGYIPEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLNVKVLTL 79
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E+ L+KL + FL L + N++VRVIG + L +++A
Sbjct: 80 YAFSTENWKRPKKEVDYLMKLPEEFLGTFLPELIEENVQVRVIGQQDRLPTHTRRAMEKA 139
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
++T+ NTGL L A NY SRDEI A++++ +D E G V DV +++ YL TS +P
Sbjct: 140 MEETKENTGLILNFALNYGSRDEIVSAVQHMMKDSEKGKVRVEDVSEEMLSSYLMTSSLP 199
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DP+L+IRT GE R+S+F+LWQ+AYSEF F YWPDF+ E +A+ + R RRFGG+
Sbjct: 200 DPELLIRTSGELRISNFMLWQIAYSEFWFTDVYWPDFTEEHLLNAITDFQHRGRRFGGV 258
>gi|228947542|ref|ZP_04109832.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228812062|gb|EEM58393.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
Length = 257
Score = 308 bits (790), Expect = 4e-82, Method: Composition-based stats.
Identities = 108/239 (45%), Positives = 156/239 (65%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+V + P+HI IIMDGNGRWA R +PR AGH +G++V +I A+++ +K LT+
Sbjct: 19 LVEEVKKGYIPEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLNVKVLTL 78
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E+ L+KL + FL L + N++VRVIG + L +++A
Sbjct: 79 YAFSTENWKRPKKEVDYLMKLPEEFLGTFLPELIEENVQVRVIGQQDRLPTHTRRAMEKA 138
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
++T+ NTGL L A NY SRDEI A++++ +D E G V DV +++ YL TS +P
Sbjct: 139 MEETKENTGLILNFALNYGSRDEIVSAVQHMMKDSEEGKVRVEDVSEEMLSSYLMTSSLP 198
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DP+L+IRT GE R+S+F+LWQ+AYSEF F YWPDF+ E +A+ + R RRFGG+
Sbjct: 199 DPELLIRTSGELRISNFMLWQIAYSEFWFTDVYWPDFTEEHLLNAITDFQHRGRRFGGV 257
>gi|323705411|ref|ZP_08116986.1| undecaprenyl diphosphate synthase [Thermoanaerobacterium
xylanolyticum LX-11]
gi|323535313|gb|EGB25089.1| undecaprenyl diphosphate synthase [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 253
Score = 308 bits (789), Expect = 4e-82, Method: Composition-based stats.
Identities = 109/236 (46%), Positives = 150/236 (63%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ ++ P H+ IIMDGNGRWA RG R GHR G+E IV A++E+GIK LT++AF
Sbjct: 18 KLDKNNVPKHVAIIMDGNGRWAKKRGFIRTLGHRAGMEAVRRIVKASSEIGIKYLTLYAF 77
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RPV E++ L+ L+ +L + L +NN+K+ IG+ + + +KE+E+
Sbjct: 78 STENWKRPVDEVNGLMDLLIEYLGREVNELNENNVKLNFIGDLSMIPEKCRIKIKESEEI 137
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NTGL L IA NY R EI RA K I + SG + +D+D ++IA L TS PDPD
Sbjct: 138 TKNNTGLTLNIALNYGGRSEIVRAFKMIGSSLLSGKIDLNDIDENVIADNLYTSGQPDPD 197
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
LIIR GE R+S+F+LWQ AYSE F WPDF ++ A+ Y R+RRFGG+
Sbjct: 198 LIIRPSGELRISNFMLWQSAYSELWFSDVLWPDFEKKHLLQAIFDYQKRNRRFGGI 253
>gi|304316873|ref|YP_003852018.1| undecaprenyl diphosphate synthase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778375|gb|ADL68934.1| undecaprenyl diphosphate synthase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 253
Score = 308 bits (789), Expect = 4e-82, Method: Composition-based stats.
Identities = 103/239 (43%), Positives = 147/239 (61%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + ++ P H+ IIMDGNGRWA RG R GHR G+E +V A+ E+GIK LT+
Sbjct: 15 MGKKLDMNNIPKHVAIIMDGNGRWAKKRGFIRTLGHRAGMEAVKRVVRASCEIGIKYLTL 74
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E++ L+ L+ +L + L +N++K+ IG+ + + +KE+
Sbjct: 75 YAFSTENWKRPAEEVNGLMDLLIEYLGREINELNENDVKLNFIGDLSKIPEKCKIKIKES 134
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E+ T+ N GL L IA NY R+EI A+K I + + G + +D+D +IA L T+ P
Sbjct: 135 EEITKNNKGLTLNIALNYGGRNEIVNAVKKIGKSLLDGKIKLNDIDEQIIADNLYTAGQP 194
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDLIIR GE R+S+F+LWQ AYSE F WPDF + A+ Y R+RRFGG+
Sbjct: 195 DPDLIIRPSGELRISNFMLWQSAYSELWFSDILWPDFDKNHLLEAIIDYQKRNRRFGGI 253
>gi|218264482|ref|ZP_03478315.1| hypothetical protein PRABACTJOHN_04015 [Parabacteroides johnsonii
DSM 18315]
gi|218221975|gb|EEC94625.1| hypothetical protein PRABACTJOHN_04015 [Parabacteroides johnsonii
DSM 18315]
Length = 247
Score = 308 bits (789), Expect = 4e-82, Method: Composition-based stats.
Identities = 98/242 (40%), Positives = 153/242 (63%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + + P H+ IIMDGNGRWA A+G R GH++G+ ++V AA VG+K LT+
Sbjct: 3 LIEQIDKNRLPQHVAIIMDGNGRWAKAKGKDRSYGHQEGVVSVRKVVEAATTVGLKYLTM 62
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW RP +E+ L+ L+ + + + L KNN+++ IGN L D L++
Sbjct: 63 YTFSTENWNRPEAEVQALMSLLVAAIHRETPDLMKNNVRLMAIGNLDRLPADAHATLQDC 122
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
QT NTG+ L +A +YS+R EI+ A+K + ++ + D+ ++++ +L T +P
Sbjct: 123 IAQTSANTGVTLILALSYSARWEITEAVKRLAGEVAEKKINPDDITEAVVSDHLTTKGIP 182
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRTGGE+R+S+FLLWQ++Y+EF F YWPDF E + A+ Y R+RRFG S
Sbjct: 183 DPDLLIRTGGEQRVSNFLLWQLSYAEFFFTDVYWPDFREEELYGAILYYQQRERRFGKTS 242
Query: 241 KK 242
++
Sbjct: 243 EQ 244
>gi|299534750|ref|ZP_07048080.1| undecaprenyl pyrophosphate synthetase [Lysinibacillus fusiformis
ZC1]
gi|298729838|gb|EFI70383.1| undecaprenyl pyrophosphate synthetase [Lysinibacillus fusiformis
ZC1]
Length = 264
Score = 308 bits (789), Expect = 4e-82, Method: Composition-based stats.
Identities = 102/239 (42%), Positives = 147/239 (61%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
VA S P H+ IIMDGNGRWA R +PR AGH +G++ ++ A+++GIK LT++
Sbjct: 21 VALAKSEPIPAHVAIIMDGNGRWAKKRAMPRVAGHHEGMKTVRKVTRFASDLGIKVLTVY 80
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E+ L++L FL + + N++V +IG+ L L EA
Sbjct: 81 AFSTENWKRPKPEVDFLMRLPVEFLGSFLPEMMERNVRVEMIGDPSLLPAHTQKALYEAM 140
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T+ NTGL L A NY SR E+ A+K + Q ++ G + D+ + +L T+ +P+
Sbjct: 141 EETKHNTGLILNFALNYGSRSEMVNAMKMMLQKVQDGQLTMQDITEDCLTSHLMTAHLPE 200
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
PDL+IRT GE RLS+F+LWQ+AY+EF F WPDFS E A+ Y R+RR+GGL
Sbjct: 201 PDLLIRTSGEVRLSNFMLWQLAYTEFWFTDTLWPDFSEENLLEAVENYQKRNRRYGGLK 259
>gi|241890062|ref|ZP_04777360.1| di-trans,poly-cis-decaprenylcistransferase [Gemella haemolysans
ATCC 10379]
gi|241863684|gb|EER68068.1| di-trans,poly-cis-decaprenylcistransferase [Gemella haemolysans
ATCC 10379]
Length = 254
Score = 308 bits (789), Expect = 4e-82, Method: Composition-based stats.
Identities = 105/233 (45%), Positives = 151/233 (64%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ IIMDGNGRWA R +PR GH +G++ +I A+++G++ LT++AFS NW
Sbjct: 21 KIPTHVAIIMDGNGRWAKKRNMPRIKGHYEGMQTVKKITKYASKLGVEYLTLYAFSTENW 80
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+S L+ L + L +NN+KV VIG L ++ + +A + T+ NT
Sbjct: 81 ARPKEEVSYLMDLPEKMFSSFMPELMENNVKVEVIGVVEKLPENTRKAVNDAIENTKNNT 140
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL L A NY S+DE+ RAIK I +D++ ++ +++ L TS+ PDPDL+IRT
Sbjct: 141 GLKLIFALNYGSKDEMLRAIKQITKDVQDNKYSIDEISEEHVSQNLFTSNTPDPDLLIRT 200
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
GE+R+S+FLLWQ+AYSEF+F WPDF+ E F+ AL +Y RDRRFGGL++
Sbjct: 201 SGEQRISNFLLWQIAYSEFLFTKVAWPDFTEEEFYKALLEYQSRDRRFGGLNE 253
>gi|49478396|ref|YP_037884.1| undecaprenyl pyrophosphate synthase [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|52141665|ref|YP_085164.1| undecaprenyl diphosphate synthase [Bacillus cereus E33L]
gi|118479045|ref|YP_896196.1| undecaprenyl pyrophosphate synthase [Bacillus thuringiensis str. Al
Hakam]
gi|167635808|ref|ZP_02394117.1| undecaprenyl diphosphate synthase [Bacillus anthracis str. A0442]
gi|170687893|ref|ZP_02879107.1| undecaprenyl diphosphate synthase [Bacillus anthracis str. A0465]
gi|196036914|ref|ZP_03104298.1| undecaprenyl diphosphate synthase [Bacillus cereus W]
gi|196042152|ref|ZP_03109435.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus cereus
NVH0597-99]
gi|196044641|ref|ZP_03111876.1| undecaprenyl diphosphate synthase [Bacillus cereus 03BB108]
gi|206978509|ref|ZP_03239366.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus cereus
H3081.97]
gi|217961243|ref|YP_002339811.1| undecaprenyl diphosphate synthase [Bacillus cereus AH187]
gi|218904951|ref|YP_002452785.1| undecaprenyl diphosphate synthase [Bacillus cereus AH820]
gi|225865804|ref|YP_002751182.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus cereus
03BB102]
gi|228916460|ref|ZP_04080026.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228928871|ref|ZP_04091903.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228935137|ref|ZP_04097964.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|229123336|ref|ZP_04252540.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus 95/8201]
gi|229140464|ref|ZP_04269019.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus BDRD-ST26]
gi|229157399|ref|ZP_04285477.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus ATCC 4342]
gi|229186062|ref|ZP_04313232.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus BGSC 6E1]
gi|229197933|ref|ZP_04324649.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus m1293]
gi|254683470|ref|ZP_05147330.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus anthracis str.
CNEVA-9066]
gi|254721991|ref|ZP_05183780.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus anthracis str.
A1055]
gi|254739613|ref|ZP_05197307.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus anthracis str.
Kruger B]
gi|301055313|ref|YP_003793524.1| undecaprenyl diphosphate synthase [Bacillus anthracis CI]
gi|73920253|sp|Q6HEZ2|UPPS_BACHK RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|49329952|gb|AAT60598.1| undecaprenyl diphosphate synthase [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|51975134|gb|AAU16684.1| undecaprenyl diphosphate synthase [Bacillus cereus E33L]
gi|118418270|gb|ABK86689.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis str.
Al Hakam]
gi|167528765|gb|EDR91523.1| undecaprenyl diphosphate synthase [Bacillus anthracis str. A0442]
gi|170668209|gb|EDT18958.1| undecaprenyl diphosphate synthase [Bacillus anthracis str. A0465]
gi|195990469|gb|EDX54453.1| undecaprenyl diphosphate synthase [Bacillus cereus W]
gi|196024676|gb|EDX63348.1| undecaprenyl diphosphate synthase [Bacillus cereus 03BB108]
gi|196027004|gb|EDX65628.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus cereus
NVH0597-99]
gi|206743278|gb|EDZ54728.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus cereus
H3081.97]
gi|217065567|gb|ACJ79817.1| undecaprenyl diphosphate synthase [Bacillus cereus AH187]
gi|218535849|gb|ACK88247.1| undecaprenyl diphosphate synthase [Bacillus cereus AH820]
gi|225786641|gb|ACO26858.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus cereus
03BB102]
gi|228585651|gb|EEK43753.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus m1293]
gi|228597481|gb|EEK55131.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus BGSC 6E1]
gi|228626126|gb|EEK82875.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus ATCC 4342]
gi|228643025|gb|EEK99301.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus BDRD-ST26]
gi|228660112|gb|EEL15748.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus 95/8201]
gi|228824502|gb|EEM70307.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228830678|gb|EEM76283.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228843039|gb|EEM88121.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|300377482|gb|ADK06386.1| undecaprenyl diphosphate synthase [Bacillus cereus biovar anthracis
str. CI]
Length = 258
Score = 308 bits (789), Expect = 4e-82, Method: Composition-based stats.
Identities = 108/239 (45%), Positives = 156/239 (65%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+V + P+HI IIMDGNGRWA R +PR AGH +G++V +I A+++ +K LT+
Sbjct: 20 LVEEVKKGYIPEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLNVKVLTL 79
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E+ L+KL + FL L + N++VRVIG + L +++A
Sbjct: 80 YAFSTENWKRPKKEVDYLMKLPEEFLGTFLPELIEENVQVRVIGQQDRLPTHTRRAMEKA 139
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
++T+ NTGL L A NY SRDEI A++++ +D E G V DV +++ YL TS +P
Sbjct: 140 MEETKENTGLILNFALNYGSRDEIVSAVQHMMKDSEEGKVRVEDVSEEMLSSYLMTSSLP 199
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DP+L+IRT GE R+S+F+LWQ+AYSEF F YWPDF+ E +A+ + R RRFGG+
Sbjct: 200 DPELLIRTSGELRISNFMLWQIAYSEFWFTDVYWPDFTEEHLLNAITDFQHRGRRFGGV 258
>gi|229162759|ref|ZP_04290716.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus R309803]
gi|228620641|gb|EEK77510.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus R309803]
Length = 258
Score = 308 bits (789), Expect = 5e-82, Method: Composition-based stats.
Identities = 108/239 (45%), Positives = 155/239 (64%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+V + P+HI IIMDGNGRWA R +PR AGH +G++V +I A+++ +K LT+
Sbjct: 20 LVEEVKKGYIPEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLNVKVLTL 79
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E+ L+KL + FL L + N++VRVIG + L +++A
Sbjct: 80 YAFSTENWKRPKKEVDYLMKLPEEFLGTFLPELIEENVQVRVIGQQDRLPTHTRRAMEKA 139
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ T+ NTGL L A NY SRDEI A++++ +D E G V DV +++ YL TS +P
Sbjct: 140 MEDTKENTGLILNFALNYGSRDEIVSAVQHMMKDSEEGKVRVEDVSEEMLSSYLMTSSLP 199
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DP+L+IRT GE R+S+F+LWQ+AYSEF F YWPDF+ E +A+ + R RRFGG+
Sbjct: 200 DPELLIRTSGELRISNFMLWQIAYSEFWFTDVYWPDFTEEHLLNAITDFQHRGRRFGGV 258
>gi|188588608|ref|YP_001920607.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum
E3 str. Alaska E43]
gi|251778482|ref|ZP_04821402.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum
E1 str. 'BoNT E Beluga']
gi|188498889|gb|ACD52025.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum
E3 str. Alaska E43]
gi|243082797|gb|EES48687.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum
E1 str. 'BoNT E Beluga']
Length = 252
Score = 308 bits (789), Expect = 5e-82, Method: Composition-based stats.
Identities = 107/236 (45%), Positives = 143/236 (60%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P HI IIMDGNGRWA R LPR GH+ G+E +IV + +GIK LT++AFS
Sbjct: 17 LDMYKIPQHIAIIMDGNGRWAKKRKLPRSMGHKAGVETIRKIVKESKRLGIKYLTLYAFS 76
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+ L++L+ +LK+ L KN +K+ V+G+ + L +A T
Sbjct: 77 TENWKRPKEEVGALMQLLVVYLKREVAELNKNGVKINVLGDMSKFPAECREELNKAIQIT 136
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NT +NL +A NY RDE+ RAIK I D+E + D+ LI+ Y+ T +PDPDL
Sbjct: 137 NNNTEINLNLALNYGGRDELVRAIKLIIDDLEDDKIKKEDISEDLISNYIYTKGMPDPDL 196
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IIR GE+R+S+FLLWQ AYSEF + WPDF E A+ Y RDRRFGG+
Sbjct: 197 IIRPSGEQRISNFLLWQCAYSEFWYSDIAWPDFKEEDLQKAILDYQNRDRRFGGVK 252
>gi|301155651|emb|CBW15119.1| undecaprenyl pyrophosphate synthase [Haemophilus parainfluenzae
T3T1]
Length = 239
Score = 308 bits (788), Expect = 6e-82, Method: Composition-based stats.
Identities = 93/239 (38%), Positives = 142/239 (59%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + +++ P+H+ IIMDGNGRWA + R GH G+ V+ A + G+K LT++
Sbjct: 1 MKELDNNNIPEHVAIIMDGNGRWAKQQNKLRIFGHTNGVAAVRRAVSYARQTGVKFLTLY 60
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+S L+ L L + L KNNI++++IG+ + + + +AE
Sbjct: 61 AFSSENWNRPEQEVSALMTLFMQALDREVKKLHKNNIRLKIIGDVSRFSEKLQEKIAKAE 120
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ T NT L L IA NY +I +A + + + +++ + D++ SL ++L T D P
Sbjct: 121 NLTENNTALTLNIAANYGGCWDIVQATQQLAEKVKNNEISVSDINESLFQQHLVTQDEPP 180
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRT GE+R+S+FLLWQ+AY+E F+ WPDFS + F A+ Y R RRFGG
Sbjct: 181 VDLLIRTSGEQRISNFLLWQIAYAELCFLDVLWPDFSEKDFNQAIACYQQRHRRFGGTE 239
>gi|187932579|ref|YP_001885460.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum B
str. Eklund 17B]
gi|187720732|gb|ACD21953.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum B
str. Eklund 17B]
Length = 252
Score = 308 bits (788), Expect = 6e-82, Method: Composition-based stats.
Identities = 106/237 (44%), Positives = 146/237 (61%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ + P HI IIMDGNGRWA R LPR GH+ G+E +IV + +GIK LT++AF
Sbjct: 16 ALDMNKIPQHIAIIMDGNGRWAKKRKLPRSMGHKAGVETIRKIVKESKRLGIKYLTLYAF 75
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP E+ L++L+ +LK+ L KN +K+ V+G+ + L +A +
Sbjct: 76 STENWKRPKEEVGALMQLLVVYLKREVAELNKNGVKINVLGDMSKFPAECKKELNKAIEI 135
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NT +NL +A NY RDE+ RA+K I D+E + D+ LI+ Y+ T +PDPD
Sbjct: 136 TNNNTEINLNLALNYGGRDELVRAMKLIIDDLEDDKIKKEDIGEDLISNYIYTKGMPDPD 195
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LIIR GE+R+S+FLLWQ AYSEF + WPDF E A+ Y RDRRFGG+
Sbjct: 196 LIIRPSGEQRISNFLLWQCAYSEFWYSDIAWPDFKEEDLQKAILDYQNRDRRFGGVK 252
>gi|229136694|ref|ZP_04265353.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus BDRD-ST196]
gi|228646764|gb|EEL02940.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus BDRD-ST196]
Length = 258
Score = 308 bits (788), Expect = 6e-82, Method: Composition-based stats.
Identities = 106/239 (44%), Positives = 155/239 (64%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+V + P+HI IIMDGNGRWA R +PR AGH +G+++ +I A+++ +K LT+
Sbjct: 20 LVKKIKQGYIPEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQIVKKITKFASKLDVKVLTL 79
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E+ L+KL + FL L + N++VRVIG + L ++ A
Sbjct: 80 YAFSTENWKRPKKEVDYLMKLPEEFLGTFLPELIEENVQVRVIGQKDRLPTHTRRAMERA 139
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ T+ NTGL L A NY SRDEI A++++ +D E G + S ++ +I+ YL TS +P
Sbjct: 140 MEDTKDNTGLILNFALNYGSRDEIVSAVQHMMKDSEEGKIRSEEISEEMISSYLMTSSLP 199
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DP+L+IRT GE R+S+F+LWQ+AYSEF F YWPDF+ E +A+ + R RRFGG+
Sbjct: 200 DPELLIRTSGELRISNFMLWQIAYSEFWFTDVYWPDFTEEHLLNAIADFQHRGRRFGGV 258
>gi|324327720|gb|ADY22980.1| undecaprenyl pyrophosphate synthase [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 257
Score = 308 bits (788), Expect = 6e-82, Method: Composition-based stats.
Identities = 108/239 (45%), Positives = 156/239 (65%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+V + P+HI IIMDGNGRWA R +PR AGH +G++V +I A+++ +K LT+
Sbjct: 19 LVEEVKKGYIPEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLNVKVLTL 78
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E+ L+KL + FL L + N++VRVIG + L +++A
Sbjct: 79 YAFSTENWKRPKKEVDYLMKLPEEFLGTFLPELIEENVQVRVIGQQDRLPTHTRRAMEKA 138
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
++T+ NTGL L A NY SRDEI A++++ +D E G V DV +++ YL TS +P
Sbjct: 139 MEETKENTGLILNFALNYGSRDEIVSAVQHMMKDREEGKVRVEDVSEEMLSSYLMTSSLP 198
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DP+L+IRT GE R+S+F+LWQ+AYSEF F YWPDF+ E +A+ + R RRFGG+
Sbjct: 199 DPELLIRTSGELRISNFMLWQIAYSEFWFTDVYWPDFTEEHLLNAITDFQHRGRRFGGV 257
>gi|150390446|ref|YP_001320495.1| undecaprenyl diphosphate synthase [Alkaliphilus metalliredigens
QYMF]
gi|149950308|gb|ABR48836.1| undecaprenyl diphosphate synthase [Alkaliphilus metalliredigens
QYMF]
Length = 248
Score = 308 bits (788), Expect = 6e-82, Method: Composition-based stats.
Identities = 109/239 (45%), Positives = 157/239 (65%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + S+ P HI IIMDGNGRWA R +PR GHR G+E +++ A+ VG++ LT+
Sbjct: 10 LYEQVKSNDIPKHIAIIMDGNGRWAKKRKMPRAFGHRAGVEALRDVIRTASNVGVEYLTL 69
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP E+S L+KL+ +L+K L +N++K+ IG+ SL ++ + +A
Sbjct: 70 YAFSTENWNRPPEEVSLLMKLLIEYLRKEVRELHENHVKITTIGDIESLPSEVRIEIGKA 129
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
T N GL++ IA NY SRDE++RA+K+I + + + + +I K+LDTS++P
Sbjct: 130 VKMTNENKGLSVNIALNYGSRDEMTRAVKSIASQLLANEISLEQISYDMIEKHLDTSNIP 189
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRT GE RLS+FLLWQ+AYSEF F YWPDF E A+N + R+RRFGG+
Sbjct: 190 DPDLLIRTSGEHRLSNFLLWQLAYSEFYFTETYWPDFKGENLLQAINDFQNRERRFGGI 248
>gi|30263827|ref|NP_846204.1| undecaprenyl diphosphate synthase [Bacillus anthracis str. Ames]
gi|47778228|ref|YP_020600.2| undecaprenyl diphosphate synthase [Bacillus anthracis str. 'Ames
Ancestor']
gi|49186673|ref|YP_029925.1| undecaprenyl pyrophosphate synthase [Bacillus anthracis str.
Sterne]
gi|65321150|ref|ZP_00394109.1| COG0020: Undecaprenyl pyrophosphate synthase [Bacillus anthracis
str. A2012]
gi|165872608|ref|ZP_02217239.1| undecaprenyl diphosphate synthase [Bacillus anthracis str. A0488]
gi|167639832|ref|ZP_02398101.1| undecaprenyl diphosphate synthase [Bacillus anthracis str. A0193]
gi|170706781|ref|ZP_02897239.1| undecaprenyl diphosphate synthase [Bacillus anthracis str. A0389]
gi|177651999|ref|ZP_02934545.1| undecaprenyl diphosphate synthase [Bacillus anthracis str. A0174]
gi|190568468|ref|ZP_03021375.1| undecaprenyl diphosphate synthase [Bacillus anthracis
Tsiankovskii-I]
gi|227813269|ref|YP_002813278.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus anthracis str.
CDC 684]
gi|229603927|ref|YP_002868061.1| undecaprenyl pyrophosphate synthetase 1 [Bacillus anthracis str.
A0248]
gi|254735861|ref|ZP_05193567.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus anthracis str.
Western North America USA6153]
gi|254756014|ref|ZP_05208045.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus anthracis str.
Vollum]
gi|254759325|ref|ZP_05211350.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus anthracis str.
Australia 94]
gi|42559791|sp|Q81WL2|UPPS_BACAN RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|30258471|gb|AAP27690.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus anthracis str.
Ames]
gi|47551933|gb|AAT33075.2| undecaprenyl diphosphate synthase [Bacillus anthracis str. 'Ames
Ancestor']
gi|49180600|gb|AAT55976.1| undecaprenyl diphosphate synthase [Bacillus anthracis str. Sterne]
gi|164711640|gb|EDR17186.1| undecaprenyl diphosphate synthase [Bacillus anthracis str. A0488]
gi|167512233|gb|EDR87610.1| undecaprenyl diphosphate synthase [Bacillus anthracis str. A0193]
gi|170128199|gb|EDS97068.1| undecaprenyl diphosphate synthase [Bacillus anthracis str. A0389]
gi|172082368|gb|EDT67433.1| undecaprenyl diphosphate synthase [Bacillus anthracis str. A0174]
gi|190560472|gb|EDV14450.1| undecaprenyl diphosphate synthase [Bacillus anthracis
Tsiankovskii-I]
gi|227002926|gb|ACP12669.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus anthracis str.
CDC 684]
gi|229268335|gb|ACQ49972.1| undecaprenyl pyrophosphate synthetase 1 [Bacillus anthracis str.
A0248]
Length = 258
Score = 308 bits (788), Expect = 7e-82, Method: Composition-based stats.
Identities = 107/239 (44%), Positives = 156/239 (65%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+V + P+HI IIMDGNGRWA R +PR AGH +G++V +I A+++ +K LT+
Sbjct: 20 LVEEVKKGYIPEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLNVKVLTL 79
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E+ L++L + FL L + N++VRVIG + L +++A
Sbjct: 80 YAFSTENWKRPKKEVDYLMQLPEEFLGTFLPELIEENVQVRVIGQQDRLPTHTRRAMEKA 139
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
++T+ NTGL L A NY SRDEI A++++ +D E G V DV +++ YL TS +P
Sbjct: 140 MEETKENTGLILNFALNYGSRDEIVSAVQHMMKDSEEGKVRVEDVSEEMLSSYLMTSSLP 199
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DP+L+IRT GE R+S+F+LWQ+AYSEF F YWPDF+ E +A+ + R RRFGG+
Sbjct: 200 DPELLIRTSGELRISNFMLWQIAYSEFWFTDVYWPDFTEEHLLNAITDFQHRGRRFGGV 258
>gi|325954735|ref|YP_004238395.1| undecaprenyl pyrophosphate synthase [Weeksella virosa DSM 16922]
gi|323437353|gb|ADX67817.1| Undecaprenyl pyrophosphate synthase [Weeksella virosa DSM 16922]
Length = 261
Score = 307 bits (787), Expect = 7e-82, Method: Composition-based stats.
Identities = 97/241 (40%), Positives = 143/241 (59%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + P HI IIMDGNGRWA G R GH+ ++ + A E+GI LT++
Sbjct: 19 IDQIDRKRVPQHIAIIMDGNGRWAKKTGHERTFGHKNALKAVRAAIEACRELGIPYLTLY 78
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+S L+ L+ ++K L +NN+++ VIGN L L LK+
Sbjct: 79 AFSSENWNRPKLEVSLLMTLLAQTIQKEIKELHQNNVRLNVIGNVERLPQATLKELKKGL 138
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ T+ NTG L +A +Y S++EI A K+I Q ++G + ++D L ++L T +P
Sbjct: 139 ELTQNNTGSTLTLALSYGSKEEILSATKSIAQSYKNGEISLEEIDEQLFEQHLYTRHLPM 198
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRT GE+R+S+FLLWQ+AY+E F WPDF+ E + A+ Y R+RRFG S+
Sbjct: 199 VDLMIRTSGEERISNFLLWQIAYAELYFTDTLWPDFTHENLYEAVLNYQGRERRFGKTSE 258
Query: 242 K 242
+
Sbjct: 259 Q 259
>gi|288553031|ref|YP_003424966.1| undecaprenyl pyrophosphate synthase [Bacillus pseudofirmus OF4]
gi|288544191|gb|ADC48074.1| undecaprenyl pyrophosphate synthetase [Bacillus pseudofirmus OF4]
Length = 257
Score = 307 bits (787), Expect = 7e-82, Method: Composition-based stats.
Identities = 112/236 (47%), Positives = 156/236 (66%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ ++ P H+ IIMDGNGRWA +GLPR AGHR+G++V N+IV A E+G++ LT++AF
Sbjct: 22 ELDPAAVPRHVAIIMDGNGRWAKQKGLPRIAGHREGMKVVNKIVRRANELGVEVLTLYAF 81
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP +E+ L+KL + FL L + N+KVR++G+ L + L + +A +
Sbjct: 82 STENWKRPKTEVDYLMKLPERFLGMELPKLMEENVKVRLMGSLDHLPEHTLRAVNKAVHE 141
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NTGL L A NY SR E+ A+K I +E G + D+D +I L T+D+ DPD
Sbjct: 142 TKDNTGLILNFALNYGSRFEMVEAMKEIALKVEKGELKPSDIDDKVIESNLMTADLKDPD 201
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
L+IRT GE RLS+F+LWQVAYSEF F WPDF+ E F A++ Y R RRFGG+
Sbjct: 202 LLIRTSGEIRLSNFMLWQVAYSEFWFTDVLWPDFNEEHFTEAISIYQKRARRFGGV 257
>gi|126654120|ref|ZP_01725938.1| undecaprenyl diphosphate synthase [Bacillus sp. B14905]
gi|169827158|ref|YP_001697316.1| undecaprenyl pyrophosphate synthetase [Lysinibacillus sphaericus
C3-41]
gi|126589400|gb|EAZ83550.1| undecaprenyl diphosphate synthase [Bacillus sp. B14905]
gi|168991646|gb|ACA39186.1| Undecaprenyl pyrophosphate synthetase [Lysinibacillus sphaericus
C3-41]
Length = 264
Score = 307 bits (787), Expect = 7e-82, Method: Composition-based stats.
Identities = 102/239 (42%), Positives = 147/239 (61%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
VA S P H+ IIMDGNGRWA R +PR AGH +G++ ++ A+++GIK LT++
Sbjct: 21 VALTKSEPIPAHVAIIMDGNGRWAKKRAMPRVAGHHEGMKTVRKVTRFASDLGIKVLTVY 80
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E+ L++L FL + + N++V +IG+ L L EA
Sbjct: 81 AFSTENWKRPKPEVDFLMRLPVEFLGSFLPEMMERNVRVEMIGDPSLLPAHTQKALYEAM 140
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T+ NTGL L A NY SR E+ A+K + Q ++ G + D+ + +L T+ +P+
Sbjct: 141 EETKHNTGLILNFALNYGSRSEMVNAMKMMLQKVQDGQLTMQDLTEECLTSHLMTAHLPE 200
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
PDL+IRT GE RLS+F+LWQ+AY+EF F WPDFS E A+ Y R+RR+GGL
Sbjct: 201 PDLLIRTSGEVRLSNFMLWQLAYTEFWFTDTLWPDFSEETLLEAVENYQKRNRRYGGLK 259
>gi|218232974|ref|YP_002368624.1| undecaprenyl diphosphate synthase [Bacillus cereus B4264]
gi|228954099|ref|ZP_04116128.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|229047509|ref|ZP_04193099.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus AH676]
gi|229111294|ref|ZP_04240847.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus Rock1-15]
gi|218160931|gb|ACK60923.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus cereus B4264]
gi|228672070|gb|EEL27361.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus Rock1-15]
gi|228723756|gb|EEL75111.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus AH676]
gi|228805665|gb|EEM52255.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar kurstaki str. T03a001]
Length = 257
Score = 307 bits (787), Expect = 8e-82, Method: Composition-based stats.
Identities = 107/239 (44%), Positives = 155/239 (64%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+V + P+HI IIMDGNGRWA R +PR AGH +G++V +I A+++ +K LT+
Sbjct: 19 LVEEVKKGYIPEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLNVKVLTL 78
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E+ L+KL + FL L + N++VRVIG + L +++A
Sbjct: 79 YAFSTENWKRPKKEVDYLMKLPEEFLGTFLPELIEENVQVRVIGQKDRLPTHTRRAMEKA 138
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ T+ NTGL L A NY SRDEI A++++ +D E G + S +V +++ YL TS +P
Sbjct: 139 MEDTKENTGLILNFALNYGSRDEIVSAVQHMMKDNEEGKIRSEEVSEEMLSSYLMTSSLP 198
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DP+L+IRT GE R+S+F+LWQ+AYSEF F YWPDF E +A+ + R RRFGG+
Sbjct: 199 DPELLIRTSGELRISNFMLWQIAYSEFWFTDVYWPDFKEEHLLNAITDFQHRGRRFGGV 257
>gi|219669722|ref|YP_002460157.1| undecaprenyl diphosphate synthase [Desulfitobacterium hafniense
DCB-2]
gi|219539982|gb|ACL21721.1| undecaprenyl diphosphate synthase [Desulfitobacterium hafniense
DCB-2]
Length = 256
Score = 307 bits (787), Expect = 8e-82, Method: Composition-based stats.
Identities = 100/242 (41%), Positives = 152/242 (62%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + ++ P HI IIMDGNGRWA RGLPR GH+ G+E +IV A + +GI+ LT+
Sbjct: 15 LADQLDKNNLPRHIAIIMDGNGRWAQKRGLPRTVGHKAGVEALRDIVKACSNLGIEALTV 74
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP E++ L+ L+ +L++ L N ++V++IGN L + LK +
Sbjct: 75 YAFSTENWSRPKEEVNILMNLLIDYLRRELDELHDNKVRVQMIGNMEQLPLEAQRELKRS 134
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+T N GL L +A NY R EI+ A++ + + + + ++ LI+++L TS +
Sbjct: 135 IKKTVNNGGLILNLALNYGGRAEITCAVRQLCEKVLKKELTPEEITGELISQHLFTSGLS 194
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GE R+S+FLLWQ+AY+E + WPDFS + AL ++ R+RRFGGL+
Sbjct: 195 DPDLLIRTSGELRVSNFLLWQIAYTEIIVTECLWPDFSPDQLVEALLEFQKRERRFGGLN 254
Query: 241 KK 242
K+
Sbjct: 255 KR 256
>gi|42782914|ref|NP_980161.1| undecaprenyl diphosphate synthase [Bacillus cereus ATCC 10987]
gi|73920252|sp|Q732P6|UPPS_BACC1 RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|42738841|gb|AAS42769.1| undecaprenyl diphosphate synthase [Bacillus cereus ATCC 10987]
Length = 258
Score = 307 bits (787), Expect = 8e-82, Method: Composition-based stats.
Identities = 108/239 (45%), Positives = 156/239 (65%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+V + P+HI IIMDGNGRWA R +PR AGH +G++V +I A+++ +K LT+
Sbjct: 20 LVEEVKKGYIPEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLNVKVLTL 79
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E+ L+KL + FL L + N++VRVIG + L +++A
Sbjct: 80 YAFSTENWKRPKKEVDYLMKLPEEFLGTFLPELIEENVQVRVIGQQDRLPTHTRRAMEKA 139
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
++T+ NTGL L A NY SRDEI A++++ +D E G V DV +++ YL TS +P
Sbjct: 140 MEETKENTGLILNFALNYGSRDEIVSAVQHMMKDREEGKVRVEDVSEEMLSSYLMTSSLP 199
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DP+L+IRT GE R+S+F+LWQ+AYSEF F YWPDF+ E +A+ + R RRFGG+
Sbjct: 200 DPELLIRTSGELRISNFMLWQIAYSEFWFTDVYWPDFTEEHLLNAITDFQHRGRRFGGV 258
>gi|226313031|ref|YP_002772925.1| undecaprenyl pyrophosphate synthetase [Brevibacillus brevis NBRC
100599]
gi|226095979|dbj|BAH44421.1| undecaprenyl pyrophosphate synthetase [Brevibacillus brevis NBRC
100599]
Length = 236
Score = 307 bits (787), Expect = 9e-82, Method: Composition-based stats.
Identities = 104/234 (44%), Positives = 155/234 (66%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
S P+H+ IIMDGNGRWA R LPR AGHR G++ E+V AA E+G++ +T++AFS
Sbjct: 3 RSGKIPEHVAIIMDGNGRWANKRSLPRVAGHRAGMKAVKEVVKAADEIGVRYMTMYAFST 62
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP E+ L+KL + FL L + +++R++G++ L L L EAE++T+
Sbjct: 63 ENWKRPRDEVDFLMKLPQEFLSTELDELIERGVRIRMLGSKNELPSHTLKALLEAEERTK 122
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N+GL L A NY RDE+++A + + +++G + + LI+ YL TS++PDPDL+
Sbjct: 123 DNSGLQLNFALNYGGRDELAKAFSVMAEQVKAGELQPEQLTEELISSYLYTSEIPDPDLL 182
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRT GE RLS+F+LWQ+AY+E F WPDF+RE F+ A+ +Y R RR+G +
Sbjct: 183 IRTSGEIRLSNFMLWQLAYTELWFTDVLWPDFTREHFYQAIVEYQGRARRYGAV 236
>gi|30021911|ref|NP_833542.1| undecaprenyl diphosphate synthase [Bacillus cereus ATCC 14579]
gi|206972650|ref|ZP_03233591.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus cereus AH1134]
gi|218898976|ref|YP_002447387.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus cereus G9842]
gi|228902326|ref|ZP_04066483.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis IBL
4222]
gi|228909647|ref|ZP_04073470.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis IBL
200]
gi|228922577|ref|ZP_04085877.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228960039|ref|ZP_04121703.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|229071321|ref|ZP_04204544.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus F65185]
gi|229081078|ref|ZP_04213588.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus Rock4-2]
gi|229129099|ref|ZP_04258072.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus BDRD-Cer4]
gi|229146394|ref|ZP_04274765.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus BDRD-ST24]
gi|229152022|ref|ZP_04280217.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus m1550]
gi|229180099|ref|ZP_04307443.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus 172560W]
gi|296504318|ref|YP_003666018.1| undecaprenyl diphosphate synthase [Bacillus thuringiensis BMB171]
gi|42559785|sp|Q819Y1|UPPS_BACCR RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|29897467|gb|AAP10743.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus ATCC 14579]
gi|206732407|gb|EDZ49588.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus cereus AH1134]
gi|218542759|gb|ACK95153.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus cereus G9842]
gi|228603308|gb|EEK60785.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus 172560W]
gi|228631371|gb|EEK88005.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus m1550]
gi|228637027|gb|EEK93486.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus BDRD-ST24]
gi|228654336|gb|EEL10201.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus BDRD-Cer4]
gi|228702122|gb|EEL54598.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus Rock4-2]
gi|228711775|gb|EEL63727.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus F65185]
gi|228799555|gb|EEM46508.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228837006|gb|EEM82347.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228849936|gb|EEM94767.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis IBL
200]
gi|228857295|gb|EEN01798.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis IBL
4222]
gi|296325370|gb|ADH08298.1| undecaprenyl diphosphate synthase [Bacillus thuringiensis BMB171]
Length = 258
Score = 307 bits (787), Expect = 9e-82, Method: Composition-based stats.
Identities = 107/239 (44%), Positives = 155/239 (64%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+V + P+HI IIMDGNGRWA R +PR AGH +G++V +I A+++ +K LT+
Sbjct: 20 LVEEVKKGYIPEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLNVKVLTL 79
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E+ L+KL + FL L + N++VRVIG + L +++A
Sbjct: 80 YAFSTENWKRPKKEVDYLMKLPEEFLGTFLPELIEENVQVRVIGQKDRLPTHTRRAMEKA 139
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ T+ NTGL L A NY SRDEI A++++ +D E G + S +V +++ YL TS +P
Sbjct: 140 MEDTKENTGLILNFALNYGSRDEIVSAVQHMMKDNEEGKIRSEEVSEEMLSSYLMTSSLP 199
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DP+L+IRT GE R+S+F+LWQ+AYSEF F YWPDF E +A+ + R RRFGG+
Sbjct: 200 DPELLIRTSGELRISNFMLWQIAYSEFWFTDVYWPDFKEEHLLNAITDFQHRGRRFGGV 258
>gi|326336680|ref|ZP_08202848.1| di-trans,poly-cis-decaprenylcistransferase [Capnocytophaga sp. oral
taxon 338 str. F0234]
gi|325691150|gb|EGD33121.1| di-trans,poly-cis-decaprenylcistransferase [Capnocytophaga sp. oral
taxon 338 str. F0234]
Length = 242
Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats.
Identities = 91/240 (37%), Positives = 141/240 (58%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
++ P H+ IIMDGNGRWA +G R GH KG +I+ +++GI LT++
Sbjct: 1 MNIDKERLPKHLAIIMDGNGRWAKQQGKKRIFGHEKGARTVRKIIEEVSQIGIPYLTLYT 60
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW+RP E+ L+ L+ +LKK ++KNN+++ IG+ SL I L++A +
Sbjct: 61 FSSENWKRPKLEVDALMHLLSRYLKKEMAVMQKNNVRLNAIGDLQSLPKSIQRELQKAME 120
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T+ NT + +A Y + EI + ++ + Q +E G + D+ +++ + L T +P
Sbjct: 121 LTQNNTKTTVSLALGYGGQQEILQMVQRVAQKVEKGELSPCDITPNIVEESLYTKGIPPV 180
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL+IRT GE R+S+FLLWQ+AY+E F WPDF+ E AL Y R+RRFG S++
Sbjct: 181 DLLIRTSGEYRISNFLLWQIAYAELYFTNVLWPDFTPEELHKALLDYQNRERRFGKTSEQ 240
>gi|89895288|ref|YP_518775.1| hypothetical protein DSY2542 [Desulfitobacterium hafniense Y51]
gi|89334736|dbj|BAE84331.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 256
Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats.
Identities = 100/242 (41%), Positives = 151/242 (62%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + P HI IIMDGNGRWA RGLPR GH+ G+E +IV A + +GI+ LT+
Sbjct: 15 LADQLDKDNLPRHIAIIMDGNGRWAQKRGLPRTVGHKAGVEALRDIVKACSNLGIEALTV 74
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP E++ L+ L+ +L++ L N ++V++IGN L + LK +
Sbjct: 75 YAFSTENWSRPKEEVNILMNLLIDYLRRELDELHDNKVRVQMIGNMEQLPLEAQRELKRS 134
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+T N GL L +A NY R EI+ A++ + + + + ++ LI+++L TS +
Sbjct: 135 IKKTVNNGGLILNLALNYGGRAEITCAVRQLCEKVLKKELTPEEITGELISQHLFTSGLS 194
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GE R+S+FLLWQ+AY+E + WPDFS + AL ++ R+RRFGGL+
Sbjct: 195 DPDLLIRTSGELRVSNFLLWQIAYTEIIVTECLWPDFSPDQLVEALLEFQKRERRFGGLN 254
Query: 241 KK 242
K+
Sbjct: 255 KR 256
>gi|163941561|ref|YP_001646445.1| undecaprenyl diphosphate synthase [Bacillus weihenstephanensis
KBAB4]
gi|229061426|ref|ZP_04198771.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus AH603]
gi|229134630|ref|ZP_04263440.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus BDRD-ST196]
gi|229168562|ref|ZP_04296285.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus AH621]
gi|163863758|gb|ABY44817.1| undecaprenyl diphosphate synthase [Bacillus weihenstephanensis
KBAB4]
gi|228614968|gb|EEK72070.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus AH621]
gi|228648891|gb|EEL04916.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus BDRD-ST196]
gi|228717849|gb|EEL69497.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus AH603]
Length = 258
Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats.
Identities = 106/239 (44%), Positives = 155/239 (64%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + P+HI IIMDGNGRWA R +PR AGH +G++V +I A+++ +K LT+
Sbjct: 20 LIEKVKKGYIPEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLDVKVLTL 79
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E+ L+KL + FL L + N++VRVIG + L +++A
Sbjct: 80 YAFSTENWKRPKKEVDYLMKLPEEFLGAFLPELIEENVQVRVIGQKDRLPTHTRRAMEKA 139
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ T+ NTGL L A NY SRDEI A++++ +D E G + S ++ I+ YL TS +P
Sbjct: 140 MEDTKENTGLILNFALNYGSRDEIVSAVQHMMKDSEEGKIRSEEISEEKISSYLMTSSLP 199
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DP+L+IRT GE R+S+F+LWQ+AYSEF F YWPDF+ E +A+ + R RRFGG+
Sbjct: 200 DPELLIRTSGELRISNFMLWQIAYSEFWFTDVYWPDFTEEHLLNAITDFQHRGRRFGGV 258
>gi|229013006|ref|ZP_04170171.1| Undecaprenyl pyrophosphate synthetase [Bacillus mycoides DSM 2048]
gi|228748260|gb|EEL98120.1| Undecaprenyl pyrophosphate synthetase [Bacillus mycoides DSM 2048]
Length = 258
Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats.
Identities = 106/239 (44%), Positives = 155/239 (64%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + P+HI IIMDGNGRWA R +PR AGH +G++V +I A+++ +K LT+
Sbjct: 20 LIEKVKKGYIPEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLDVKVLTL 79
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E+ L+KL + FL L + N++VRVIG + L +++A
Sbjct: 80 YAFSTENWKRPKKEVDYLMKLPEEFLGAFLPELLEENVQVRVIGQKDRLPTHTRRAMEKA 139
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ T+ NTGL L A NY SRDEI A++++ +D E G + S ++ I+ YL TS +P
Sbjct: 140 MEDTKENTGLILNFALNYGSRDEIVSAVQHMMKDSEEGKIRSEEISEEKISSYLMTSSLP 199
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DP+L+IRT GE R+S+F+LWQ+AYSEF F YWPDF+ E +A+ + R RRFGG+
Sbjct: 200 DPELLIRTSGELRISNFMLWQIAYSEFWFTDVYWPDFTEEHLLNAITDFQHRGRRFGGV 258
>gi|302389811|ref|YP_003825632.1| Undecaprenyl pyrophosphate synthetase [Thermosediminibacter oceani
DSM 16646]
gi|302200439|gb|ADL08009.1| Undecaprenyl pyrophosphate synthetase [Thermosediminibacter oceani
DSM 16646]
Length = 248
Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats.
Identities = 113/241 (46%), Positives = 153/241 (63%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+V + P+HI IIMDGNGRWA RGLPR AGH G E IV +E+ IK LT+
Sbjct: 8 LVDRVDRKKLPNHIAIIMDGNGRWAQKRGLPRIAGHWAGAENLRNIVEFCSELNIKVLTV 67
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW+RP+ E+ ++ L+ +LKK +L +NNIK+ + G L + ++++
Sbjct: 68 FAFSTENWKRPLDEVKSILNLLVYYLKKEVDNLNRNNIKLMITGEWQELPPRVRAEIEKS 127
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ T NTGL L +A NY SR EI RA K++ + + SG + D+D L ++L T+ +P
Sbjct: 128 IELTSSNTGLILNVALNYGSRREIVRACKDVCRMVASGQLSPGDIDEKLFEQHLFTAGLP 187
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IR GE RLS+FLLWQ AYSE F YWPDF RE +A+ Y R+RRFGGL+
Sbjct: 188 DPDLLIRPSGELRLSNFLLWQTAYSELWFCDTYWPDFKREDLINAILDYQRRERRFGGLT 247
Query: 241 K 241
K
Sbjct: 248 K 248
>gi|88801352|ref|ZP_01116880.1| Undecaprenyl pyrophosphate synthase [Polaribacter irgensii 23-P]
gi|88782010|gb|EAR13187.1| Undecaprenyl pyrophosphate synthase [Polaribacter irgensii 23-P]
Length = 247
Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats.
Identities = 98/239 (41%), Positives = 147/239 (61%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P HI IIMDGNGRWA +G+ R GHR + E V AA++G++ +T++AF
Sbjct: 6 RIDLQKVPKHIAIIMDGNGRWAKGKGMSRVFGHRHALTAVRESVETAAQIGVQAITLYAF 65
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP E+ L++L+ + LKK + +KN + V IGN +L LKE
Sbjct: 66 STENWKRPKLEVDALMQLLVNSLKKELPTFQKNEVLVNAIGNIDNLPSKAQKALKEVIAL 125
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N+ + L +A +Y SR+EI +AI+NI + + +C +++ I +L T ++PD D
Sbjct: 126 TKANSKIILTLALSYGSREEIVKAIQNISKKVVKKELCIKEINEKTINNHLYTFNLPDVD 185
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRT GE R+S+FLLWQ+AY+E F WPDF +E F+ A+ Y R+RRFG S++
Sbjct: 186 LMIRTSGEHRISNFLLWQMAYAELYFTDVLWPDFRKEHFYDAIIDYQNRERRFGKTSEQ 244
>gi|325579126|ref|ZP_08149082.1| di-trans,poly-cis-decaprenylcistransferase [Haemophilus
parainfluenzae ATCC 33392]
gi|325159361|gb|EGC71495.1| di-trans,poly-cis-decaprenylcistransferase [Haemophilus
parainfluenzae ATCC 33392]
Length = 239
Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats.
Identities = 93/239 (38%), Positives = 141/239 (58%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + +++ P+H+ IIMDGNGRWA + R GH G+ V+ A + G+K LT++
Sbjct: 1 MKELDNNNIPEHVAIIMDGNGRWAKQQNKLRIFGHTNGVAAVRRAVSYARQTGVKFLTLY 60
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+S L+ L L L KNNI++++IG+ + + + +AE
Sbjct: 61 AFSSENWNRPEQEVSALMTLFMQALDLEVKKLHKNNIRLKIIGDISRFSEKLQEKIAKAE 120
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ T NT L L IA NY +I +A + + + +++ + D++ SL ++L T D P
Sbjct: 121 NLTENNTALTLNIAANYGGCWDIVQATQQLAEKVKNNEISVSDINESLFQQHLVTQDEPP 180
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRT GE+R+S+FLLWQ+AY+E F+ WPDFS + F A+ Y R RRFGG
Sbjct: 181 VDLLIRTSGEQRISNFLLWQIAYAELCFLDVLWPDFSEKDFNQAIACYQQRHRRFGGTE 239
>gi|154491825|ref|ZP_02031451.1| hypothetical protein PARMER_01446 [Parabacteroides merdae ATCC
43184]
gi|154088066|gb|EDN87111.1| hypothetical protein PARMER_01446 [Parabacteroides merdae ATCC
43184]
Length = 247
Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats.
Identities = 99/242 (40%), Positives = 153/242 (63%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + + P H+ IIMDGNGRWA A+G R GH++G+ ++V AA VG+K LT+
Sbjct: 3 LIEQIDKNRLPQHVAIIMDGNGRWAKAKGKDRSYGHQEGVVSVRKVVEAATTVGLKYLTM 62
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW RP +E+ L+ L+ + + + L KNN+++ IGN L D L++
Sbjct: 63 YTFSTENWNRPEAEVQALMSLLVAAIHRETPDLMKNNVRLMAIGNLDRLPADAYATLQDC 122
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
QT NTG+ L +A +YS+R EI+ A+K + ++ + D+ ++++ YL T +P
Sbjct: 123 IAQTSANTGVTLILALSYSARWEITEAVKRLAREAVEKKINPDDITEAVVSDYLTTKGIP 182
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRTGGE+R+S+FLLWQ++Y+EF F YWPDF E + A+ Y R+RRFG S
Sbjct: 183 DPDLLIRTGGEQRVSNFLLWQLSYAEFFFTDVYWPDFREEELYGAILYYQQRERRFGKTS 242
Query: 241 KK 242
++
Sbjct: 243 EQ 244
>gi|260892484|ref|YP_003238581.1| undecaprenyl diphosphate synthase [Ammonifex degensii KC4]
gi|260864625|gb|ACX51731.1| undecaprenyl diphosphate synthase [Ammonifex degensii KC4]
Length = 264
Score = 306 bits (785), Expect = 1e-81, Method: Composition-based stats.
Identities = 102/240 (42%), Positives = 147/240 (61%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++A + + P H+ +IMDGNGRWAA RGLPR AGH+ GIE +V E+GI L+
Sbjct: 23 LLALIRPEALPRHVAVIMDGNGRWAAQRGLPRSAGHQAGIETLRRVVELCGELGIPILSA 82
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NWRRP E++ L+ L + + L++ ++V+VIG R L +L +
Sbjct: 83 YAFSTENWRRPPEEVNFLMNLFVEYAAREIEELREKGVRVKVIGCRSELPPAVLAAAERL 142
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E +T L L +A NY +R EI A++ I + + +G + ++D +A +L T+ +P
Sbjct: 143 ERETAQGERLLLNLAVNYGARREIVDAVRAIARKVRAGELEPEEIDEDTVAAHLYTAGLP 202
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IR GE R+S+FLLWQ+AY+E P +WPDFSR F AL Y R+RRFGGL
Sbjct: 203 DPDLLIRPAGEMRVSNFLLWQLAYTELYVTPVFWPDFSRVDFLQALVAYQRRERRFGGLK 262
>gi|229031453|ref|ZP_04187453.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus AH1271]
gi|228729742|gb|EEL80722.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus AH1271]
Length = 257
Score = 306 bits (785), Expect = 1e-81, Method: Composition-based stats.
Identities = 106/239 (44%), Positives = 155/239 (64%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+V + P+HI IIMDGNGRWA R +PR AGH +G++V +I A+++ +K LT+
Sbjct: 19 LVEKVKKGYIPEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLNVKVLTL 78
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E+ L++L + FL L + N++VRVIG + L +++A
Sbjct: 79 YAFSTENWKRPKKEVDYLMRLPEEFLGTFLPELIEENVQVRVIGQQDRLPTHTRRAMEKA 138
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ T+ NTGL L A NY SRDEI A++++ +D E G + DV +++ YL TS +P
Sbjct: 139 MEDTKENTGLILNFALNYGSRDEIVSAVQHMVKDSEEGKIRVEDVSEEMLSSYLMTSSLP 198
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DP+L+IRT GE R+S+F+LWQ+AYSEF F YWPDF+ E +A+ + R RRFGG+
Sbjct: 199 DPELLIRTSGELRISNFMLWQIAYSEFWFTDVYWPDFTEEHLLNAITDFQHRGRRFGGV 257
>gi|229191992|ref|ZP_04318962.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus ATCC 10876]
gi|228591543|gb|EEK49392.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus ATCC 10876]
Length = 258
Score = 306 bits (785), Expect = 1e-81, Method: Composition-based stats.
Identities = 106/239 (44%), Positives = 155/239 (64%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+V + P+HI IIMDGNGRWA R +PR AGH +G++V +I A+++ +K LT+
Sbjct: 20 LVEEVKKGYIPEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLNVKVLTL 79
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E+ L+KL + FL L + N++VRVIG + L +++A
Sbjct: 80 YAFSTENWKRPKKEVDYLMKLPEEFLGTFLPELIEENVQVRVIGQKDRLPTHTRRAMEKA 139
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ T+ NTGL L A NY SRDEI A++++ +D E G + S +V +++ YL T+ +P
Sbjct: 140 MEDTKENTGLILNFALNYGSRDEIVSAVQHMMKDNEEGKIRSEEVSEEMLSSYLMTNSLP 199
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DP+L+IRT GE R+S+F+LWQ+AYSEF F YWPDF E +A+ + R RRFGG+
Sbjct: 200 DPELLIRTSGELRISNFMLWQIAYSEFWFTDVYWPDFKEEHLLNAITDFQHRGRRFGGV 258
>gi|218437839|ref|YP_002376168.1| undecaprenyl pyrophosphate synthase [Cyanothece sp. PCC 7424]
gi|218170567|gb|ACK69300.1| undecaprenyl diphosphate synthase [Cyanothece sp. PCC 7424]
Length = 249
Score = 306 bits (785), Expect = 1e-81, Method: Composition-based stats.
Identities = 88/239 (36%), Positives = 143/239 (59%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + + P H+ +IMDGNGRWA RGLPR GH++G++ +++ + G+ LT
Sbjct: 11 LPSDLDKTRLPQHVAVIMDGNGRWAKRRGLPRILGHQRGVDTLKDLLRCCRDWGVPALTA 70
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP+ E+ L+ L + L++ + + N+++R +GN +L + + +
Sbjct: 71 YAFSTENWGRPLEEVEFLMTLFERVLRRELKEMMEENVRIRFLGNLEALPSSLQDEIARS 130
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
++T+ NTG+ +A NY R EI +A + I ++ G + D+D L +L T ++P
Sbjct: 131 MNETKENTGIQFSVATNYGGRQEIVQACRAIATQVQEGKLNPEDIDEELFGHHLYTHEIP 190
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDL+IRT GE R+S+FLLWQ+AY+E WPDF R+ F AL + R+RRFG +
Sbjct: 191 YPDLLIRTSGEMRISNFLLWQLAYAEIYVTQTLWPDFDRKEFHQALLNFQQRERRFGKV 249
>gi|166365279|ref|YP_001657552.1| undecaprenyl pyrophosphate synthetase [Microcystis aeruginosa
NIES-843]
gi|166087652|dbj|BAG02360.1| undecaprenyl pyrophosphate synthetase [Microcystis aeruginosa
NIES-843]
Length = 249
Score = 306 bits (785), Expect = 1e-81, Method: Composition-based stats.
Identities = 93/239 (38%), Positives = 145/239 (60%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + P H+ +IMDGNGRWA RGLPR GH++G++ +++ + GI LT
Sbjct: 11 LPTDLDKNRLPQHVAVIMDGNGRWAKNRGLPRIMGHQRGVDALKDLLRCCRDWGIPALTA 70
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP+ E+ L+ L + L++ + + N+K+R IGN +L + + + ++
Sbjct: 71 YAFSTENWGRPLEEVEFLMTLFERVLRRELEEMMQQNVKIRFIGNLSALPESLRREIAKS 130
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ +T N+G+ +A NY R+EI +A + I + ++ G V +D SL +YL T+ +P
Sbjct: 131 QAETSKNSGIQFTVATNYGGREEIVQACQAIARQVQQGLVSPEAIDESLFEQYLYTAGIP 190
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+PDL+IR+ GE R+S+FLLWQ+AY+E WPDF R F AL Y R RRFG L
Sbjct: 191 NPDLLIRSSGEMRISNFLLWQMAYAEIYVTDTLWPDFDRVQFHRALKDYQGRHRRFGKL 249
>gi|332664450|ref|YP_004447238.1| Undecaprenyl pyrophosphate synthase [Haliscomenobacter hydrossis
DSM 1100]
gi|332333264|gb|AEE50365.1| Undecaprenyl pyrophosphate synthase [Haliscomenobacter hydrossis
DSM 1100]
Length = 248
Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats.
Identities = 103/237 (43%), Positives = 143/237 (60%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IIMDGNGRWA G PR GHR G++ E AAAE+G+K LT++AFS
Sbjct: 7 IDTDRLPQHIAIIMDGNGRWAKQHGQPRVFGHRNGVKAVRETTEAAAELGVKYLTLYAFS 66
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP E+ L+ L+ L K +L KNNI++ IG+ L L + T
Sbjct: 67 TENWGRPKFEVDALMTLLVDTLHKEIATLNKNNIRLEAIGDLSKLPGSTHRALLDGIANT 126
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
R NT + L +A NYS++ EI A + + ++ G + D++ + A L T +PDP+L
Sbjct: 127 RTNTRMTLVLALNYSAKWEILEASRQMAALVKDGKMEIEDINEATFANALSTKGIPDPEL 186
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
+IRT GE RLS+FLLWQ+AY+EF F P WPDF +E FF A+ + R+RRFG + +
Sbjct: 187 LIRTSGENRLSNFLLWQLAYAEFYFTPTLWPDFHKEHFFQAIIDFQNRERRFGKIEE 243
>gi|325286848|ref|YP_004262638.1| Undecaprenyl pyrophosphate synthase [Cellulophaga lytica DSM 7489]
gi|324322302|gb|ADY29767.1| Undecaprenyl pyrophosphate synthase [Cellulophaga lytica DSM 7489]
Length = 246
Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats.
Identities = 97/241 (40%), Positives = 143/241 (59%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + + PDH+ IIMDGNGRWA +G R GH G++ ++V A++G+ LT++
Sbjct: 4 IEDLNKENIPDHLAIIMDGNGRWAKQKGKLRIFGHENGVKTVRKVVENCAKLGVGYLTLY 63
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
FS NW RP E+ L++++ S LKK +L KNNIK+ IGN L LK
Sbjct: 64 TFSTENWNRPKLEVDTLMRILVSSLKKEVKTLNKNNIKLNAIGNLSLLPAKAGEELKNVM 123
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T NTG+ L +A +Y SRDEI A++ I +++ + ++D +I +L T ++PD
Sbjct: 124 SKTSANTGMTLTLALSYGSRDEIRTAVQEISIKVKNNIISPENIDEIIINNHLYTQNLPD 183
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRT GE R+S+FLLWQ+AY+E F WPDF A+ Y R+RRFG S+
Sbjct: 184 VDLLIRTSGEHRISNFLLWQIAYAELYFTDVLWPDFKEHHLVDAIKNYQNRERRFGKTSE 243
Query: 242 K 242
+
Sbjct: 244 Q 244
>gi|293390813|ref|ZP_06635147.1| di-trans,poly-cis-decaprenylcistransferase [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290951347|gb|EFE01466.1| di-trans,poly-cis-decaprenylcistransferase [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 239
Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats.
Identities = 98/239 (41%), Positives = 145/239 (60%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + ++ P H+ IIMDGNGRWA +G R GH+ G+ E V+ A ++G+K LT++
Sbjct: 1 MTELDPNNIPQHVAIIMDGNGRWAKQQGKMRIFGHKNGVAAVREAVSYARKIGVKYLTLY 60
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+S L+ L L L KNNI+++++GN + + + +K+AE
Sbjct: 61 AFSSENWNRPEQEVSALMNLFMQALDFEVKKLHKNNIRLKILGNVVRFSEGLQEKIKKAE 120
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T NT L L IA NY R +I +A + + Q I++ + ++D +L+ ++L T D P+
Sbjct: 121 KLTENNTALTLNIAANYGGRWDIVQAAQQLAQKIQTQQLAVTEIDEALLQQHLVTQDEPE 180
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRT GE+R+S+FLLWQ AY+EF F WPDF+ F A+ Y R RRFGG
Sbjct: 181 VDLLIRTSGEQRISNFLLWQTAYAEFYFSDVLWPDFNEAEFHQAILSYQQRHRRFGGTE 239
>gi|228940911|ref|ZP_04103470.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228973840|ref|ZP_04134416.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228980429|ref|ZP_04140739.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
Bt407]
gi|228779249|gb|EEM27506.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
Bt407]
gi|228785865|gb|EEM33868.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228818747|gb|EEM64813.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|326941591|gb|AEA17487.1| undecaprenyl diphosphate synthase [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 258
Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats.
Identities = 108/239 (45%), Positives = 155/239 (64%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+V + P+HI IIMDGNGRWA R +PR AGH +G++V +I A+++ +K LT+
Sbjct: 20 LVEEVKKGYIPEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLNVKVLTL 79
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E+ L+KL + FL L + N++VRVIG + L +++A
Sbjct: 80 YAFSTENWKRPKKEVDYLMKLPEEFLGTFLPELIEENVQVRVIGQKNRLPTHTRRAMEKA 139
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ T+ NTGL L A NY SRDEI A++++ +D E G + S +V +I+ YL TS +P
Sbjct: 140 MEDTKENTGLILNFALNYGSRDEIVSAVQHMMKDNEEGKIRSEEVSEEMISSYLMTSSLP 199
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DP+L+IRT GE R+S+F+LWQ+AYSEF F YWPDF E +A+ + R RRFGG+
Sbjct: 200 DPELLIRTSGELRISNFMLWQIAYSEFWFTDVYWPDFKEEHLLNAITDFQHRGRRFGGV 258
>gi|307243331|ref|ZP_07525495.1| di-trans,poly-cis-decaprenylcistransferase [Peptostreptococcus
stomatis DSM 17678]
gi|306493278|gb|EFM65267.1| di-trans,poly-cis-decaprenylcistransferase [Peptostreptococcus
stomatis DSM 17678]
Length = 243
Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats.
Identities = 102/232 (43%), Positives = 150/232 (64%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HI IIMDGNGRWA +R +PR GH+ G+E ++V + +G+K LT++AFS NW
Sbjct: 12 KVPAHIAIIMDGNGRWAKSRFMPRTYGHKVGVETIRKVVKECSRLGVKYLTLYAFSTENW 71
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP E+S L+ L+ +L+ L KNN+K+ IG+ L + L A+++T+ NT
Sbjct: 72 KRPKEEVSALMGLLVKYLRNELEELHKNNVKILTIGDISKLPQACIEELDHAKEKTKDNT 131
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL + +A NY R+++ A+KNI Q++ G + D+ LI+ +L T + PDPDL++RT
Sbjct: 132 GLVMSLALNYGGRNDLVNAVKNISQEVVDGKISVDDIGDDLISSHLSTKESPDPDLVVRT 191
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
GE+RLS+FLLW++AYSEF F +WPDF + A+ Y RDRRFGG+
Sbjct: 192 SGEQRLSNFLLWELAYSEFYFADIHWPDFDEKELQKAIFAYQSRDRRFGGIK 243
>gi|256820184|ref|YP_003141463.1| undecaprenyl diphosphate synthase [Capnocytophaga ochracea DSM
7271]
gi|256581767|gb|ACU92902.1| undecaprenyl diphosphate synthase [Capnocytophaga ochracea DSM
7271]
Length = 240
Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats.
Identities = 102/238 (42%), Positives = 151/238 (63%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M ++ P H+ IIMDGNGRWA +GL R GH KG++ ++V E I LT+FAFS
Sbjct: 1 MEITNYPKHLAIIMDGNGRWAKKQGLLRAYGHEKGVQTVRQVVEYCVEHRIPYLTLFAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+ L++L+ FLKK +L KNN++++ IGN L + D+
Sbjct: 61 TENWKRPALEVKALMELLVKFLKKEVDNLHKNNVRLKTIGNLDRFPPKPREALLASIDKL 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NTGL L +A NY +R+EI AIK I ++ G++ ++ + + + K+L T D+PD DL
Sbjct: 121 KNNTGLTLTLALNYGAREEILTAIKEIAAKVKEGTLIANTITETTLQKHLYTYDLPDVDL 180
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IRT GE+R+S+FLLWQ+AY+E F WPDF+++ AL+ Y R+RRFG S++
Sbjct: 181 LIRTSGEERISNFLLWQIAYAELYFTEVLWPDFTKKHLEEALSNYQNRERRFGKTSEQ 238
>gi|159029860|emb|CAO90914.1| uppS [Microcystis aeruginosa PCC 7806]
Length = 249
Score = 306 bits (783), Expect = 2e-81, Method: Composition-based stats.
Identities = 95/239 (39%), Positives = 147/239 (61%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + P H+ +IMDGNGRWA +RGLPR GH++G++ +++ E GI LT
Sbjct: 11 LPTDLDKNRLPQHVAVIMDGNGRWAKSRGLPRIMGHQRGVDALKDLLRCCGEWGIPALTA 70
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP+ E+ L+ L + L++ + + N+K+R IGN +L + + + ++
Sbjct: 71 YAFSTENWGRPLEEVEFLMTLFERVLQRELEEMMQENVKIRFIGNLAALPESLRREIAKS 130
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ +T N+G+ +A NY R+EI +A + I + ++ G V +D SL A+YL T+ +P
Sbjct: 131 QAETSKNSGIQFTVAANYGGREEIVQACQAIARQVQQGLVSPEAIDESLFAQYLYTAGIP 190
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+PDL+IR+ GE R+S+FLLWQ+AY+E WPDF R F AL Y R RRFG L
Sbjct: 191 NPDLLIRSSGEMRISNFLLWQMAYAEIYVTDTLWPDFDRVQFHRALKDYQGRHRRFGKL 249
>gi|42559824|sp|Q8GDY3|UPPS_HELMO RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|27262324|gb|AAN87443.1| Undecaprenyl pyrophosphate synthetase [Heliobacillus mobilis]
Length = 260
Score = 306 bits (783), Expect = 2e-81, Method: Composition-based stats.
Identities = 102/240 (42%), Positives = 138/240 (57%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P HI IIMDGNGRWA RGLPR AGHR G+E ++ + I LT+
Sbjct: 20 LSEQIDPHRIPKHIAIIMDGNGRWAKRRGLPRVAGHRAGVESLRRVLEVCEDYNIAYLTV 79
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E++ L L+ +L + +L +++R IG L L++A
Sbjct: 80 YAFSTENWKRPADEVNALFDLLVEYLHRELNTLHSKGVRIRAIGKIEDLPGGPRRELEKA 139
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+T NT L L +A NY R EI A+K+I + G V +D +++YL T+DVP
Sbjct: 140 IAKTANNTRLVLNVALNYGGRFEIVEAVKSIARLAAEGKVNPDQIDEKYMSQYLYTADVP 199
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IR GE RLS+FLLWQ AY+E P WPDF R+ A+ Y RDRRFGG+
Sbjct: 200 DPDLLIRPSGELRLSNFLLWQSAYTEIWVTPTLWPDFGRKEMVQAIVDYQGRDRRFGGVK 259
>gi|150016076|ref|YP_001308330.1| undecaprenyl diphosphate synthase [Clostridium beijerinckii NCIMB
8052]
gi|149902541|gb|ABR33374.1| undecaprenyl diphosphate synthase [Clostridium beijerinckii NCIMB
8052]
Length = 252
Score = 306 bits (783), Expect = 2e-81, Method: Composition-based stats.
Identities = 110/236 (46%), Positives = 151/236 (63%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ ++ P+HI IIMDGNGRWA + LPR GH+ G+E I+ A +GIKNLT++AFS
Sbjct: 17 LDMNNIPNHIAIIMDGNGRWAKEQNLPRSMGHKAGVETIRRILKEATRLGIKNLTLYAFS 76
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP E+ L+KL+ ++LKK +N +++ V+G+ L + L+EA + T
Sbjct: 77 TENWARPKDEVGTLMKLLVTYLKKELKECHENGVRMNVLGDTSKLPKECQNALEEALETT 136
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
R NT +NL A NY R+EI RAIK I DI++G + D++ +L+ KYL T +PDPDL
Sbjct: 137 RNNTKINLNFALNYGGRNEIVRAIKLINSDIKNGKLNEEDINEALVEKYLYTKGIPDPDL 196
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IIR GE+RLS+FLLWQ AYSEF + WPDF + A+ Y RDRRFG +
Sbjct: 197 IIRPSGEQRLSNFLLWQCAYSEFWYSDINWPDFKEKDLRKAIADYQNRDRRFGKVK 252
>gi|261866958|ref|YP_003254880.1| di-trans,poly-cis-decaprenylcistransferase [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261412290|gb|ACX81661.1| di-trans,poly-cis-decaprenylcistransferase [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 239
Score = 306 bits (783), Expect = 2e-81, Method: Composition-based stats.
Identities = 97/239 (40%), Positives = 143/239 (59%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + ++ P H+ IIMDGNGRWA +G R GH+ G+ E V+ A ++G+K LT++
Sbjct: 1 MTELDPNNIPQHVAIIMDGNGRWAKQQGKMRIFGHKNGVAAVREAVSYARKIGVKYLTLY 60
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+S L+ L L L KNNI+++++GN + + +K AE
Sbjct: 61 AFSSENWNRPEQEVSALMNLFMQALDFELKKLHKNNIRLKILGNVARFSEGLQEKIKNAE 120
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T NT L L IA NY R +I +A + + Q +++ + ++D +L+ ++L T D P+
Sbjct: 121 KLTENNTALTLNIAANYGGRWDIVQAAQQLAQKVQTQQLAVTEIDEALLQQHLVTQDDPE 180
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRT GE+R+S+FLLWQ AY+EF F WPDF+ F A+ Y R RRFGG
Sbjct: 181 VDLLIRTSGEQRISNFLLWQAAYAEFYFSDVLWPDFNEAEFHQAILSYQQRHRRFGGTE 239
>gi|241204508|ref|YP_002975604.1| undecaprenyl diphosphate synthase [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240858398|gb|ACS56065.1| undecaprenyl diphosphate synthase [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 247
Score = 306 bits (783), Expect = 2e-81, Method: Composition-based stats.
Identities = 134/234 (57%), Positives = 177/234 (75%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P+H+ IIMDGNGRWA RGLPR GHRKG+E E V AA GIK LT+FAFS NWR
Sbjct: 9 VPEHVAIIMDGNGRWAKQRGLPRTMGHRKGVEAVRETVRAAGAAGIKYLTLFAFSSENWR 68
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP +E+S+L+ L+K+F+++ L + N++++VIG+R SL DIL +L EAE+ T+ NT
Sbjct: 69 RPEAEVSDLLGLLKAFIRRDLAELHRQNVRIKVIGDRDSLRSDILGLLLEAEETTKDNTS 128
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L IAFNY SRDEI+RA+ ++ +D+E+G + + D+ +LI LDT+ +PDPDLIIRT
Sbjct: 129 LTLVIAFNYGSRDEIARAVVSLARDVEAGRLRAQDITPALINARLDTAGIPDPDLIIRTS 188
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
GE+RLS+FLLWQ AYSEF+F+PEYWPDFS E+F AL+ + RDRRFGGLS +
Sbjct: 189 GEERLSNFLLWQAAYSEFIFLPEYWPDFSPEIFRSALDTFASRDRRFGGLSSQA 242
>gi|15888704|ref|NP_354385.1| undecaprenyl pyrophosphate synthase [Agrobacterium tumefaciens str.
C58]
gi|42559843|sp|Q8UFL9|UPPS_AGRT5 RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|15156444|gb|AAK87170.1| undecaprenyl pyrophosphate synthase [Agrobacterium tumefaciens str.
C58]
Length = 247
Score = 306 bits (783), Expect = 2e-81, Method: Composition-based stats.
Identities = 132/235 (56%), Positives = 172/235 (73%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
SS P+H+ IIMDGNGRWA RGLPR GHR+G+E E V AA + GI LT+FAFS N
Sbjct: 7 SSIPEHVAIIMDGNGRWAKQRGLPRVMGHRRGVEAVRETVRAAGDCGISYLTLFAFSSEN 66
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP SE+S+L+ L+K+F+++ L + N++VR+IG+R L DI +L+EAE T N
Sbjct: 67 WRRPESEVSDLMGLLKAFIRRDLAELHRENVRVRIIGDRQGLKTDIRSLLEEAEQMTAGN 126
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T L L IAFNY SRDEI+RA +I +D+ G + + + +I+ LDTS +PDPDLIIR
Sbjct: 127 TKLTLVIAFNYGSRDEITRATASIARDVAEGRLSADAITPEMISSRLDTSGMPDPDLIIR 186
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
T GE+RLS+FLLWQ AYSEF+F+PEYWPDF R+ FF A+ QY RDRRFG L+++
Sbjct: 187 TSGEERLSNFLLWQAAYSEFLFVPEYWPDFDRQRFFSAIEQYATRDRRFGALAEQ 241
>gi|213961711|ref|ZP_03389977.1| di-trans,poly-cis-decaprenylcistransferase [Capnocytophaga
sputigena Capno]
gi|213955500|gb|EEB66816.1| di-trans,poly-cis-decaprenylcistransferase [Capnocytophaga
sputigena Capno]
Length = 240
Score = 305 bits (782), Expect = 3e-81, Method: Composition-based stats.
Identities = 97/232 (41%), Positives = 141/232 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +GL R GH KG++ ++V E I LT++AFS NW R
Sbjct: 7 PKHLAIIMDGNGRWAKKQGLLRAFGHEKGVQTVRQVVEYCVEHKIPYLTLYAFSTENWNR 66
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L+ FLKK SL KNN+K+ IGN L D+ + NTG+
Sbjct: 67 PALEVKALMELLVKFLKKEVDSLLKNNVKLNTIGNLDRFPPKARETLLATIDKLKHNTGV 126
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y SR+E+ A+K I ++ G + + + + ++L T+++PD DL+IRT G
Sbjct: 127 TLTLALSYGSREELLTAVKQIATKVKDGELTADAITEQTLQQHLYTNNLPDVDLLIRTSG 186
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AY+E F WPDF+++ AL Y R+RRFG S++
Sbjct: 187 EYRISNFLLWQIAYAELYFAEVLWPDFTKKHLEDALLNYQNRERRFGKTSEQ 238
>gi|237808852|ref|YP_002893292.1| undecaprenyl diphosphate synthase [Tolumonas auensis DSM 9187]
gi|237501113|gb|ACQ93706.1| undecaprenyl diphosphate synthase [Tolumonas auensis DSM 9187]
Length = 259
Score = 305 bits (782), Expect = 3e-81, Method: Composition-based stats.
Identities = 102/241 (42%), Positives = 151/241 (62%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
++ + + S P H+ IIMDGNGRWA RG R AGH+ G+ ++V+ A+ +GIK LT+F
Sbjct: 7 ISEIANQSMPKHVAIIMDGNGRWAQQRGKIRVAGHKAGVASVRQVVSIASRMGIKALTLF 66
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP SE+S L++L L + L NI++RVIGN + + + +AE
Sbjct: 67 AFSSENWRRPESEVSALMELFMFVLGREVRKLHDGNIRLRVIGNIHGFSERLQKKIHDAE 126
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T NTG+ L IA NY + +I +A + I + + G + +D SL++++L +D+PD
Sbjct: 127 ALTANNTGMTLNIAANYGGQWDIVQACQQIAEKVAQGGLLPEQIDESLLSQHLSMADIPD 186
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRTGG+ R+S+FLLWQ+AY+E F P WPDF + F A+ + R+RRFG
Sbjct: 187 VDLLIRTGGDHRISNFLLWQIAYAELFFTPVLWPDFGEDQFMEAIASFVSRERRFGCTGD 246
Query: 242 K 242
+
Sbjct: 247 Q 247
>gi|305665179|ref|YP_003861466.1| undecaprenyl pyrophosphate synthetase [Maribacter sp. HTCC2170]
gi|88709931|gb|EAR02163.1| undecaprenyl pyrophosphate synthetase [Maribacter sp. HTCC2170]
Length = 246
Score = 305 bits (782), Expect = 3e-81, Method: Composition-based stats.
Identities = 91/241 (37%), Positives = 145/241 (60%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + P H+ IIMDGNGRWA +G R GH G++ V + +G++ LT++
Sbjct: 4 IEDINGQKLPKHLAIIMDGNGRWAKQKGKFRVFGHENGVKTVRSTVESCVRIGLEYLTLY 63
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
FS NW RP E+ L++L+ S LKK + KNN+++ IG+ SL + L E
Sbjct: 64 TFSTENWNRPKIEVDTLMRLLVSSLKKELKTFNKNNVRLNTIGDIKSLPNRAYIELVEVM 123
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T+ NTG+ L +A +Y +R+E+ A++ I +++ + +D ++I +L T ++PD
Sbjct: 124 EKTKGNTGMTLTLALSYGAREELKNAVQQIAVKVKNNIISPESIDETIINNHLYTQNLPD 183
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRT GE R+S+FLLWQ+AY+E FI +WPDF + A+ Y R+RRFG S+
Sbjct: 184 VDLLIRTSGEHRISNFLLWQIAYAELYFIDVFWPDFKEQHLVEAIINYQNRERRFGKTSE 243
Query: 242 K 242
+
Sbjct: 244 Q 244
>gi|315225609|ref|ZP_07867418.1| di-trans,poly-cis-decaprenylcistransferase [Capnocytophaga ochracea
F0287]
gi|314944426|gb|EFS96466.1| di-trans,poly-cis-decaprenylcistransferase [Capnocytophaga ochracea
F0287]
Length = 240
Score = 305 bits (782), Expect = 3e-81, Method: Composition-based stats.
Identities = 101/238 (42%), Positives = 151/238 (63%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M ++ P H+ IIMDGNGRWA +GL R GH KG++ ++V E I LT+FAFS
Sbjct: 1 MEITNYPKHLAIIMDGNGRWAKKQGLLRAYGHEKGVQTVRQVVEYCVEHRIPYLTLFAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+ L++L+ FLKK +L KNN++++ IGN L + D+
Sbjct: 61 TENWKRPALEVKALMELLVKFLKKEVDNLHKNNVRLKTIGNLDRFPPKPREALLASIDKL 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NTGL L +A NY +R+EI AIK I ++ G++ ++ + + + ++L T D+PD DL
Sbjct: 121 KNNTGLTLTLALNYGAREEILTAIKEIAAKVKEGTLIANTITETTLQEHLYTYDLPDVDL 180
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IRT GE+R+S+FLLWQ+AY+E F WPDF+++ AL+ Y R+RRFG S++
Sbjct: 181 LIRTSGEERISNFLLWQIAYAELYFTEVLWPDFTKKHLEEALSNYQNRERRFGKTSEQ 238
>gi|167630329|ref|YP_001680828.1| undecaprenyl diphosphate synthase, putative [Heliobacterium
modesticaldum Ice1]
gi|167593069|gb|ABZ84817.1| undecaprenyl diphosphate synthase, putative [Heliobacterium
modesticaldum Ice1]
Length = 260
Score = 305 bits (781), Expect = 4e-81, Method: Composition-based stats.
Identities = 100/240 (41%), Positives = 140/240 (58%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + P H+ IIMDGNGRWA RGLPR AGHR G++ ++ E I+ LT+
Sbjct: 20 LIQKIDPHRIPRHVAIIMDGNGRWAKRRGLPRVAGHRAGVQSLRRVLETCEEFNIRYLTV 79
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E++ L L+ +L++ +L +++R IG L ++ L+ A
Sbjct: 80 YAFSTENWKRPADEVNALFDLLVEYLQRELGTLHDKGVQIRAIGKVSELPENPRKELERA 139
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
T N L L +A NY R EI A+K I + G + +D +L+ ++L T+DVP
Sbjct: 140 VRHTANNDKLILNVALNYGGRIEIVEAVKAIARQARDGQIDPERIDEALLNRHLYTADVP 199
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IR GE RLS+FLLWQ AY+E P WPDF R+ AL Y RDRRFGG+
Sbjct: 200 DPDLLIRPSGELRLSNFLLWQSAYTEIWVTPTLWPDFGRKEMVQALVDYQGRDRRFGGVK 259
>gi|126699752|ref|YP_001088649.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile 630]
gi|254975731|ref|ZP_05272203.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile
QCD-66c26]
gi|255093118|ref|ZP_05322596.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile CIP
107932]
gi|255101271|ref|ZP_05330248.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile
QCD-63q42]
gi|255307147|ref|ZP_05351318.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile ATCC
43255]
gi|255314860|ref|ZP_05356443.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile
QCD-76w55]
gi|255517534|ref|ZP_05385210.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile
QCD-97b34]
gi|255650645|ref|ZP_05397547.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile
QCD-37x79]
gi|255656123|ref|ZP_05401532.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile
QCD-23m63]
gi|260683735|ref|YP_003215020.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile CD196]
gi|260687395|ref|YP_003218529.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile
R20291]
gi|296450445|ref|ZP_06892201.1| Di-trans,poly-cis-decaprenylcistransferase [Clostridium difficile
NAP08]
gi|296879432|ref|ZP_06903426.1| Di-trans,poly-cis-decaprenylcistransferase [Clostridium difficile
NAP07]
gi|306520572|ref|ZP_07406919.1| undecaprenyl pyrophosphate synthase [Clostridium difficile
QCD-32g58]
gi|115251189|emb|CAJ69020.1| Undecaprenyl pyrophosphate synthetase [Clostridium difficile]
gi|260209898|emb|CBA63835.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile CD196]
gi|260213412|emb|CBE05057.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile
R20291]
gi|296260706|gb|EFH07545.1| Di-trans,poly-cis-decaprenylcistransferase [Clostridium difficile
NAP08]
gi|296429578|gb|EFH15431.1| Di-trans,poly-cis-decaprenylcistransferase [Clostridium difficile
NAP07]
Length = 244
Score = 305 bits (781), Expect = 4e-81, Method: Composition-based stats.
Identities = 111/240 (46%), Positives = 161/240 (67%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + ++ P HI IIMDGNGRWA AR LPR AGH+ G+E +IV +++G+K+LT+
Sbjct: 5 IIYDIDLNNIPTHIAIIMDGNGRWAKARFLPRTAGHKAGVETIRDIVKECSKLGVKHLTL 64
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E+ L+ L+ ++L+ L +NN+KV IG+ +L + L A
Sbjct: 65 YAFSTENWKRPKLEVDTLMNLLSTYLRNEIAELHQNNVKVTAIGDISALPKTCIRELNSA 124
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
++ T+ NTG+NL +A NY SR +I A+ +I ++ ESG + +++D +I YL T +P
Sbjct: 125 KELTKNNTGVNLNLALNYGSRADIKNALIDIVKNCESGKIDINNIDEDIIKNYLSTKSIP 184
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GE+RLS+FLLW+VAYSEF F +WPDF +E A+ Y RDRRFGGL
Sbjct: 185 DPDLVIRTSGEQRLSNFLLWEVAYSEFYFTDIHWPDFKKEELQKAIYVYQRRDRRFGGLK 244
>gi|254414515|ref|ZP_05028281.1| undecaprenyl diphosphate synthase [Microcoleus chthonoplastes PCC
7420]
gi|196178745|gb|EDX73743.1| undecaprenyl diphosphate synthase [Microcoleus chthonoplastes PCC
7420]
Length = 246
Score = 305 bits (781), Expect = 4e-81, Method: Composition-based stats.
Identities = 94/239 (39%), Positives = 149/239 (62%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + P H+ +IMDGNGRWA RG+PR GHR+G++ +++ + GI+ LT
Sbjct: 8 LPSDLDQERLPKHVAVIMDGNGRWAKRRGIPRIMGHRRGVDTLKQLLRCCDDWGIQALTA 67
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP+ E+ L+ L + L + + + N++++ +GN +L + ++ A
Sbjct: 68 YAFSTENWGRPIEEVEFLMTLFERVLIRELKEMMEENVRIQFVGNLTALPQSLQNQIERA 127
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
QT+ NTG+ +A NY R+EI +A + I ++ G + D+D +L +++L T+++
Sbjct: 128 MTQTQNNTGIQFTVATNYGGREEILQACRTIATQVQHGQLQPEDIDEALFSRHLYTANIG 187
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRT GE RLS+FLLWQ+AY+EF +WPDF RE F AL Y R+RRFG +
Sbjct: 188 DPDLLIRTSGEMRLSNFLLWQMAYAEFYITDAFWPDFDREAFHQALIAYQKRERRFGKV 246
>gi|227824513|ref|ZP_03989345.1| undecaprenyl diphosphate synthase [Acidaminococcus sp. D21]
gi|226905012|gb|EEH90930.1| undecaprenyl diphosphate synthase [Acidaminococcus sp. D21]
Length = 262
Score = 304 bits (780), Expect = 5e-81, Method: Composition-based stats.
Identities = 106/241 (43%), Positives = 149/241 (61%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ P H+ +IMDGNGRWA +G PR GH G + EIV A +GI+ LT +A
Sbjct: 22 EELDLKKIPRHVAMIMDGNGRWAKRQGKPRTFGHTYGAKALREIVRYADSIGIEALTAYA 81
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW+RPV+E+S ++KL+ +L KK +++R IG+R L D +L ++EAE
Sbjct: 82 FSTENWKRPVTEVSFIMKLLVEYLTNELEEFKKYQVRMRFIGSRKELPDLVLKKMEEAEQ 141
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
+T+ N G+ L IA NY + EI A I + +++G++ D+ +L +L T +P P
Sbjct: 142 ETKDNQGILLTIAINYGGQAEILHAATEIARQVKAGTLQPDDITKALFEDHLYTRGIPAP 201
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL+IRTGG+ R+S+FLLWQ+AYSE WPDF+ E F AL Y RDRRFGGL+KK
Sbjct: 202 DLLIRTGGDLRVSNFLLWQIAYSELWTTDVCWPDFTPERFKEALLSYQKRDRRFGGLTKK 261
Query: 243 G 243
Sbjct: 262 A 262
>gi|313633415|gb|EFS00249.1| di-trans,poly-cis-decaprenylcistransferase [Listeria seeligeri FSL
N1-067]
Length = 252
Score = 304 bits (780), Expect = 5e-81, Method: Composition-based stats.
Identities = 102/231 (44%), Positives = 142/231 (61%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ IIMDGNGRWA R LPR AGH++G++V + A +GI LT++AFS NW
Sbjct: 22 PIPRHVAIIMDGNGRWAKKRFLPRIAGHKEGMDVVKRVTRYANAIGIDVLTLYAFSTENW 81
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP E+ L+KL F L + N++V V+G R +L D + +++A T T
Sbjct: 82 KRPTDEVDFLMKLPVEFFDSFVPELIEENVRVNVMGYRENLPDHTMRAVEKAIADTAHCT 141
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL L A NY R EI A K +++ S + D+ +++ +L +S + DPDL+IRT
Sbjct: 142 GLTLNFALNYGGRSEIITAAKEAVKELVSEGNSADDLTEDMLSNHLMSSGLGDPDLLIRT 201
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE RLS+F+LWQ+AYSEF F +WPDFS+E F A+ +Y R RRFGGL
Sbjct: 202 SGELRLSNFMLWQLAYSEFYFTDTHWPDFSKEDFLQAIIEYQNRSRRFGGL 252
>gi|261407946|ref|YP_003244187.1| undecaprenyl diphosphate synthase [Paenibacillus sp. Y412MC10]
gi|329929291|ref|ZP_08283044.1| di-trans,poly-cis-decaprenylcistransferase [Paenibacillus sp. HGF5]
gi|261284409|gb|ACX66380.1| undecaprenyl diphosphate synthase [Paenibacillus sp. Y412MC10]
gi|328936660|gb|EGG33103.1| di-trans,poly-cis-decaprenylcistransferase [Paenibacillus sp. HGF5]
Length = 255
Score = 304 bits (780), Expect = 5e-81, Method: Composition-based stats.
Identities = 102/237 (43%), Positives = 147/237 (62%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P H+ IIMDGNGRWA RG+PR GH+ G++ AA E+GIK LT++AF
Sbjct: 19 QLSPDNIPHHVAIIMDGNGRWAKRRGMPRIVGHQNGMKAVKRAAIAADELGIKILTMYAF 78
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP E+ L+KL + FL L + N++VR++G+ L + ++EA +
Sbjct: 79 STENWTRPKDEVDFLMKLPQEFLAIELEELIEKNVQVRMMGHPEDLPSHTVSAMEEAVAK 138
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T N GL L A NY SR EI+ ++K + +++ G + D+ LI + L T ++PDPD
Sbjct: 139 TAGNDGLVLNFALNYGSRKEITESVKALGREVRDGILRPEDITEELIGQRLLTGELPDPD 198
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
L+IRT GE RLS+F+LWQ+AYSE F YWP+F+++ A+ Y R RR+GGLS
Sbjct: 199 LLIRTSGELRLSNFMLWQLAYSELWFTDAYWPEFTKDHLVEAVADYQQRTRRYGGLS 255
>gi|323489580|ref|ZP_08094807.1| undecaprenyl pyrophosphate synthetase [Planococcus donghaensis
MPA1U2]
gi|323396711|gb|EGA89530.1| undecaprenyl pyrophosphate synthetase [Planococcus donghaensis
MPA1U2]
Length = 263
Score = 304 bits (780), Expect = 5e-81, Method: Composition-based stats.
Identities = 100/236 (42%), Positives = 147/236 (62%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IIMDGNGRWA R LPR AGH +G++ ++ A E+G+ LT++AFS
Sbjct: 23 IPNEEVPAHIAIIMDGNGRWAKKRALPRVAGHHEGMKTVRKVTKLANELGVSVLTLYAFS 82
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+ L++L + FL L + N++V ++G +L L +++A++ T
Sbjct: 83 TENWKRPKIEVDFLMRLPEEFLTTFLPELVEENVRVEMMGYHENLPKHTLKAIQKAKEAT 142
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NTGL L A NY SR EI A+K+I + G++ D++ LI L T +P+PDL
Sbjct: 143 KNNTGLILNFALNYGSRAEIVDAVKDIAAQVAKGTLTLDDINEDLITGGLMTKGLPEPDL 202
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
+IRT GE RLS+F+LWQ+AY+EF F WPDF+ + A+ Y R+RR+GGL
Sbjct: 203 LIRTSGEVRLSNFMLWQLAYTEFWFTETLWPDFNEDSLLEAIQIYQNRNRRYGGLK 258
>gi|312621979|ref|YP_004023592.1| undecaprenyl diphosphate synthase [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202446|gb|ADQ45773.1| undecaprenyl diphosphate synthase [Caldicellulosiruptor
kronotskyensis 2002]
Length = 248
Score = 304 bits (780), Expect = 5e-81, Method: Composition-based stats.
Identities = 114/238 (47%), Positives = 152/238 (63%), Gaps = 1/238 (0%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P HI IIMDGNGRWA RGLPR AGHR G + EIV A E+G+K LT++AF
Sbjct: 11 KIDKEKMPQHIAIIMDGNGRWAKKRGLPRSAGHRFGAQKLKEIVLFADEIGLKYLTVYAF 70
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSL-KKNNIKVRVIGNRLSLDDDILCVLKEAED 122
S NW+RP E+ L+ L++ F +L K I++RVIG+ LD DI + AE+
Sbjct: 71 STENWKRPKEEVDNLMNLLREFFDTEIENLIHKTQIRIRVIGDISKLDKDIQERIVSAEE 130
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
+T+ GL + IA NY +R EI A+KN+ DI+SG + DVD +L KYL T D+PDP
Sbjct: 131 RTKDKKGLCVVIALNYGARQEIINAVKNLALDIKSGKIDIEDVDENLFKKYLYTKDIPDP 190
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IR GE R+S+FLLWQ++Y+EF F WPDF ++ A+ Y R+RRFGG+
Sbjct: 191 DLLIRPSGEMRVSNFLLWQISYTEFWFSNVLWPDFKKDHLLKAIEDYQKRERRFGGVK 248
>gi|116251981|ref|YP_767819.1| undecaprenyl pyrophosphate synthetase [Rhizobium leguminosarum bv.
viciae 3841]
gi|115256629|emb|CAK07717.1| putative undecaprenyl pyrophosphate synthetase [Rhizobium
leguminosarum bv. viciae 3841]
Length = 247
Score = 304 bits (780), Expect = 5e-81, Method: Composition-based stats.
Identities = 134/234 (57%), Positives = 176/234 (75%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P+H+ IIMDGNGRWA RGLPR GHRKG+E E V AA GIK LT+FAFS NWR
Sbjct: 9 VPEHVAIIMDGNGRWAKQRGLPRTMGHRKGVEAVRETVRAAGAAGIKYLTLFAFSSENWR 68
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP +E+S+L+ L+K+F+++ L + N++++VIG+R SL DIL +L EAE+ T+ NT
Sbjct: 69 RPEAEVSDLLGLLKAFIRRDLAELHRQNVRIKVIGDRHSLRSDILGLLLEAEETTKDNTS 128
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L IAFNY SRDEI+RA+ ++ +D+E+G + + D+ +LI LDT+ +PDPDLIIRT
Sbjct: 129 LTLVIAFNYGSRDEIARAVVSLARDVEAGRLRAQDITPALINARLDTAGIPDPDLIIRTS 188
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
GE+RLS+FLLWQ AYSEF+F+PEYWPDFS E+F AL + RDRRFGGLS +
Sbjct: 189 GEERLSNFLLWQAAYSEFIFLPEYWPDFSPEIFRSALETFASRDRRFGGLSSQA 242
>gi|150026133|ref|YP_001296959.1| di-trans,poly-cis-decaprenylcistransferase [Flavobacterium
psychrophilum JIP02/86]
gi|149772674|emb|CAL44157.1| Di-trans,poly-cis-decaprenylcistransferase [Flavobacterium
psychrophilum JIP02/86]
Length = 246
Score = 304 bits (780), Expect = 5e-81, Method: Composition-based stats.
Identities = 105/242 (43%), Positives = 153/242 (63%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + +S+ P H+ IIMDGNGRWA +G R GH G + IV A A++GI+NLT+
Sbjct: 3 LLKDINNSNLPKHLAIIMDGNGRWAKKQGFLRAIGHENGTKSVKVIVEACAKIGIENLTL 62
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW RP E+ L+K++ + LKK +L KNNIK+ IGN +L + L E
Sbjct: 63 YTFSTENWNRPKLEVDLLMKILINSLKKELATLVKNNIKLNSIGNLDNLPKSVQKELLEV 122
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
QT+ NT + L +A +Y SR+EI A+K I +++ + +D S++ K+L T ++P
Sbjct: 123 IAQTKNNTRMTLTLALSYGSREEIINAVKIISDKVKNNIISIDSIDDSILNKHLYTHNLP 182
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
D DL+IRT GE R+S+FLLWQ+AY+EF F WPDFS E + A+ Y R+RRFG S
Sbjct: 183 DVDLVIRTSGEHRISNFLLWQIAYAEFYFTDVLWPDFSEENLYEAIISYQKRERRFGKTS 242
Query: 241 KK 242
++
Sbjct: 243 EQ 244
>gi|300854492|ref|YP_003779476.1| undecaprenyl pyrophosphate synthetase [Clostridium ljungdahlii DSM
13528]
gi|300434607|gb|ADK14374.1| undecaprenyl pyrophosphate synthetase [Clostridium ljungdahlii DSM
13528]
Length = 255
Score = 304 bits (780), Expect = 6e-81, Method: Composition-based stats.
Identities = 107/236 (45%), Positives = 150/236 (63%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ ++ P HI IIMDGNGRWA R LPR GHR +E +IV +++ + LT++AFS
Sbjct: 20 IDLNNIPKHIAIIMDGNGRWAKERNLPRTMGHRAAVEAIRDIVKECSKLNVNYLTLYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+S L++L+ +LKK L KNN+ + IG+ L L + ++T
Sbjct: 80 TENWKRPKDEVSALMRLLVEYLKKELNELDKNNVIINCIGDISKLPLACQEQLIISCEKT 139
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NTGL L +A NY R EI RA K +++DI+S + D++ ++KYL T +PDPD+
Sbjct: 140 KTNTGLTLNLALNYGGRYEIVRAFKLMYEDIKSKKINEEDINEETVSKYLYTKGMPDPDI 199
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IIR GE+RLS+FLLWQ AYSEF + WPDF +E + A++ Y RDRRFGGL
Sbjct: 200 IIRPSGEQRLSNFLLWQCAYSEFWYSDIKWPDFKKEHLYKAISDYQNRDRRFGGLK 255
>gi|189345874|ref|YP_001942403.1| undecaprenyl diphosphate synthase [Chlorobium limicola DSM 245]
gi|189340021|gb|ACD89424.1| undecaprenyl diphosphate synthase [Chlorobium limicola DSM 245]
Length = 276
Score = 304 bits (779), Expect = 6e-81, Method: Composition-based stats.
Identities = 100/233 (42%), Positives = 146/233 (62%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI IIMDGNGRWA +G R GH G++ ++V A ++GI LT+F FS NW+
Sbjct: 33 LPRHIAIIMDGNGRWARLKGKTRIEGHAGGVDSVRDVVEACTQLGIGYLTLFTFSTENWK 92
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+S L++L+ L+K L NNI++ VIGN L + + VL+E + T+ N+
Sbjct: 93 RPEKEVSALMQLLIKVLRKETRELHDNNIRLNVIGNINLLPEKVSDVLRETMELTKNNSR 152
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L IA +YS + +I +A +++ D++SG + ++D L YL T +PDP+L+IRT
Sbjct: 153 LVLSIALSYSGKWDILQACRSMAFDVQSGHINPQNIDEQLFESYLSTRSLPDPELLIRTS 212
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE R+S+F+LWQ AYSE F YWPDF R + A+ + R+RRFG S++
Sbjct: 213 GEFRISNFMLWQSAYSEIYFTNTYWPDFRRAQLYDAIRDFQSRERRFGQTSEQ 265
>gi|307151049|ref|YP_003886433.1| undecaprenyl diphosphate synthase [Cyanothece sp. PCC 7822]
gi|306981277|gb|ADN13158.1| undecaprenyl diphosphate synthase [Cyanothece sp. PCC 7822]
Length = 249
Score = 304 bits (779), Expect = 6e-81, Method: Composition-based stats.
Identities = 90/239 (37%), Positives = 143/239 (59%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + P H+ +IMDGNGRWA RGLPR GH++G++ +++ + G+ LT
Sbjct: 11 LPTDLDKTRLPQHVAVIMDGNGRWAKRRGLPRILGHQRGVDALKDLLRCCRDWGVPALTA 70
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP+ E+ L+ L + L++ + + N+++R +GN +L + + +
Sbjct: 71 YAFSTENWGRPIEEVEFLMTLFERVLRRELKEMMEENVRIRFVGNLEALPSSLQDEIDRS 130
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+T+ NTG+ +A NY R EI +A + I ++ G + D+D +L ++L TS VP
Sbjct: 131 MQETKENTGIEFSVATNYGGRQEIIQACRAIASQVKQGEINPEDIDEALFERHLYTSGVP 190
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDL++RT GE R+S+FLLWQ+AY+E WPDF R+ F AL Y R+RRFG +
Sbjct: 191 YPDLLVRTSGEMRISNFLLWQLAYAEIYVTQTLWPDFDRKEFHLALLNYQQRERRFGKV 249
>gi|260913175|ref|ZP_05919657.1| di-trans,poly-cis-decaprenylcistransferase [Pasteurella dagmatis
ATCC 43325]
gi|260632762|gb|EEX50931.1| di-trans,poly-cis-decaprenylcistransferase [Pasteurella dagmatis
ATCC 43325]
Length = 239
Score = 304 bits (779), Expect = 6e-81, Method: Composition-based stats.
Identities = 95/235 (40%), Positives = 134/235 (57%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ ++ P HI IIMDGNGRWA +G R GH+ GI + VA A +VG+K LT++AF
Sbjct: 3 ELNPNNIPQHIAIIMDGNGRWAKQKGKMRIFGHKNGINAVRDAVAYARKVGVKVLTLYAF 62
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP E+S L+ L L L KNNI++ ++G+ + + + +AE
Sbjct: 63 SSENWNRPEQEVSALMNLFMQALDLEVKKLHKNNIRLNILGDITGFSEKLQQKIIQAEKL 122
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NT L L IA NY +I +A K + + ++ + D+ L ++L T P D
Sbjct: 123 TENNTALTLNIAANYGGCWDIVQAAKQLAEQVKDNQIAVSDITPELFQQHLVTKSQPQVD 182
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L+IRT GE+R+S+FLLWQ+AY+E F WPDF+ F A+ Y R RRFGG
Sbjct: 183 LLIRTSGEQRISNFLLWQLAYAELYFTDVLWPDFNESEFERAILVYQQRHRRFGG 237
>gi|225010446|ref|ZP_03700917.1| undecaprenyl diphosphate synthase [Flavobacteria bacterium
MS024-3C]
gi|225005275|gb|EEG43226.1| undecaprenyl diphosphate synthase [Flavobacteria bacterium
MS024-3C]
Length = 247
Score = 304 bits (779), Expect = 6e-81, Method: Composition-based stats.
Identities = 98/238 (41%), Positives = 148/238 (62%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P H+ IIMDGNGRWA A+G+PR GH +G++ V +GIK LT++ FS
Sbjct: 7 LHKDRLPKHLAIIMDGNGRWAKAKGMPRTFGHEQGVKTVRATVEHCVSLGIKYLTLYTFS 66
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP EI L+KL+ LKK + + NNI++ IG+ +L + L+E ++T
Sbjct: 67 TENWNRPKFEIDLLMKLLIRSLKKELKTFETNNIRLNAIGDLSALPKKAVQELEEVIEKT 126
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
R N+G+ L +A +Y SR+E+ +A+K I +++ + +D ++I +L T D+P+ DL
Sbjct: 127 RNNSGMTLSLALSYGSREELIQAVKAISVKVKNNIISPDIIDETIINTHLYTHDLPEVDL 186
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
++RT GE R+S+FLLWQ+AY+E FI WPDFS+ AL Y R+RRFG S++
Sbjct: 187 LVRTSGEHRISNFLLWQIAYAELYFISACWPDFSKAHLESALANYQNRERRFGKTSEQ 244
>gi|313638110|gb|EFS03375.1| di-trans,poly-cis-decaprenylcistransferase [Listeria seeligeri FSL
S4-171]
Length = 252
Score = 304 bits (779), Expect = 6e-81, Method: Composition-based stats.
Identities = 102/231 (44%), Positives = 141/231 (61%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ IIMDGNGRWA R LPR AGH++G++V + A +GI LT++AFS NW
Sbjct: 22 PIPRHVAIIMDGNGRWAKKRFLPRIAGHKEGMDVVKRVTRYANAIGIDVLTLYAFSTENW 81
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP E+ L+KL F L + N++V V+G R +L D + +++A T T
Sbjct: 82 KRPTDEVDFLMKLPVEFFDSFVPELIEENVRVNVMGYRENLPDHTMRAVEKAIADTAHCT 141
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL L A NY R EI A K +++ S D+ +++ +L +S + DPDL+IRT
Sbjct: 142 GLTLNFALNYGGRSEIITAAKEAVKELVSEGKSVDDLTEDMLSNHLMSSGLGDPDLLIRT 201
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE RLS+F+LWQ+AYSEF F +WPDFS+E F A+ +Y R RRFGGL
Sbjct: 202 SGELRLSNFMLWQLAYSEFYFTDTHWPDFSKEDFLQAIIEYQNRSRRFGGL 252
>gi|332799212|ref|YP_004460711.1| Undecaprenyl pyrophosphate synthase [Tepidanaerobacter sp. Re1]
gi|332696947|gb|AEE91404.1| Undecaprenyl pyrophosphate synthase [Tepidanaerobacter sp. Re1]
Length = 252
Score = 304 bits (779), Expect = 7e-81, Method: Composition-based stats.
Identities = 108/243 (44%), Positives = 150/243 (61%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M+ + + P HI IIMDGNGRWA ++ LPR AGH G E IV+ +++ I+ LT+
Sbjct: 9 MLEKLKMHNMPKHIAIIMDGNGRWAESKSLPRIAGHWAGAETLKNIVSTCSKLKIQILTV 68
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW+RP E++ L+ L+ +LKK L +NNI++ V G+ L D + +K++
Sbjct: 69 FAFSSENWKRPAEEVNSLMNLLLYYLKKEVEELHRNNIRIIVTGDWEELPDKVAKQIKKS 128
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
T+ N+GL L IA NY +R EI A KNI D+ G + +D KYL T D+P
Sbjct: 129 IIITQNNSGLVLNIALNYGARKEILLACKNICSDVLKGDLIIDKIDEERFNKYLYTHDLP 188
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IR GE R+S+FLLWQ+AY+E F +WP+F E A+ Y R+RRFGGL
Sbjct: 189 DPDLLIRPSGELRISNFLLWQIAYTELWFTEIFWPEFKPEDLLKAIYDYQARERRFGGLK 248
Query: 241 KKG 243
K+
Sbjct: 249 KQS 251
>gi|209549186|ref|YP_002281103.1| undecaprenyl diphosphate synthase [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209534942|gb|ACI54877.1| undecaprenyl diphosphate synthase [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 247
Score = 304 bits (779), Expect = 7e-81, Method: Composition-based stats.
Identities = 136/234 (58%), Positives = 178/234 (76%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P+H+ IIMDGNGRWA RGLPR GHRKG+E E V AA GIK LT+FAFS NWR
Sbjct: 9 VPEHVAIIMDGNGRWAKQRGLPRTMGHRKGVEAVRETVRAAGAAGIKYLTLFAFSSENWR 68
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP +E+S+L+ L+K+F+++ L + N++++VIG+R SL +DIL +L EAE+ T+ NT
Sbjct: 69 RPEAEVSDLLGLLKAFIRRDLAELHRQNVRIKVIGDRHSLRNDILGLLLEAEETTKDNTA 128
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L IAFNY SRDEISRA+ ++ +D+E+G + + D+ SLI LDT+ +PDPDLIIRT
Sbjct: 129 LTLVIAFNYGSRDEISRAVVSLARDVEAGRLRAQDITPSLINARLDTAGIPDPDLIIRTS 188
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
GE+RLS+FLLWQ AYSEF+F+PEYWPDFS E+F AL ++ RDRRFGGLS +
Sbjct: 189 GEERLSNFLLWQAAYSEFIFVPEYWPDFSPEIFRSALEKFASRDRRFGGLSSQA 242
>gi|240949516|ref|ZP_04753856.1| undecaprenyl pyrophosphate synthetase [Actinobacillus minor NM305]
gi|240296089|gb|EER46750.1| undecaprenyl pyrophosphate synthetase [Actinobacillus minor NM305]
Length = 237
Score = 304 bits (779), Expect = 7e-81, Method: Composition-based stats.
Identities = 98/236 (41%), Positives = 143/236 (60%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ + P H+ IIMDGNGRWA +G R GH+ G++ V+ AA+ GIK LT++A
Sbjct: 1 MNFDPQNMPKHVAIIMDGNGRWAKQQGKLRIFGHQNGVKAVRSAVSFAAKYGIKVLTLYA 60
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RP +E+S L+ L L L KNNI++++IG++ + + + EAE
Sbjct: 61 FSSENWSRPEAEVSALMTLFMKALDSEVKKLHKNNIRLKIIGDKSGFSEVLQKRIAEAEQ 120
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTGL L IA NY S +I++A + + ++ G + D+ +L L T + P
Sbjct: 121 LTATNTGLILNIAANYGSYWDITQAAQKMAVKVKLGEISVSDITPTLFQNELVTEEQPQV 180
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DL+IRT GE+R+S+FLLWQ+AY+E F P WPDF+ ++F A+ Y R+RRFGG
Sbjct: 181 DLLIRTSGEQRISNFLLWQIAYAELFFTPVLWPDFNDQVFSEAIMAYQQRERRFGG 236
>gi|86134479|ref|ZP_01053061.1| Di-trans,poly-cis-decaprenylcistransferase [Polaribacter sp.
MED152]
gi|85821342|gb|EAQ42489.1| Di-trans,poly-cis-decaprenylcistransferase [Polaribacter sp.
MED152]
Length = 247
Score = 304 bits (778), Expect = 8e-81, Method: Composition-based stats.
Identities = 99/234 (42%), Positives = 144/234 (61%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ IIMDGNGRWA +G+ R GHR + E V AA++V ++ +T++AFS NW
Sbjct: 11 KTPKHVAIIMDGNGRWAKGKGMNRIFGHRNALTAVRESVKAASQVNVEAITLYAFSTENW 70
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+ L+ L+ + LKK K +KV IG+ +L VLK+ +TR NT
Sbjct: 71 NRPKLEVDALMSLLINSLKKELPEFMKQGVKVNSIGSIDNLPSKAQKVLKDVIFETRNNT 130
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+ L A +Y SR+EI AIKNI + + + + +D + I +L T ++PD DL+IRT
Sbjct: 131 DIVLTFALSYGSREEIVNAIKNISKKVVNKELNLEKIDENTINNHLYTFNLPDVDLMIRT 190
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+R+S+FLLWQ+AY+E F WPDF +E F+ A+ +Y R+RRFG S++
Sbjct: 191 SGEQRISNFLLWQMAYAELYFTNVLWPDFRQEHFYDAIIEYQNRERRFGKTSEQ 244
>gi|182417571|ref|ZP_02948896.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium butyricum
5521]
gi|237667899|ref|ZP_04527883.1| undecaprenyl pyrophosphate synthetase 1 [Clostridium butyricum E4
str. BoNT E BL5262]
gi|182378584|gb|EDT76112.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium butyricum
5521]
gi|237656247|gb|EEP53803.1| undecaprenyl pyrophosphate synthetase 1 [Clostridium butyricum E4
str. BoNT E BL5262]
Length = 253
Score = 304 bits (778), Expect = 8e-81, Method: Composition-based stats.
Identities = 109/237 (45%), Positives = 147/237 (62%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ ++ P+HI IIMDGNGRWA R LPR GH+ G+E I+ A +G+KNLT++AF
Sbjct: 17 ELDMNNIPNHIAIIMDGNGRWAKERMLPRSMGHKAGVETIRRILKEATRLGVKNLTLYAF 76
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP E+ L+KL+ ++L+K KN +++ V G+ L + L +A +
Sbjct: 77 STENWGRPKDEVGALMKLLVTYLRKELDECHKNGVRMNVFGDTTQLPKECQEALDDALET 136
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NT +NL A NY RDEI RAIK ++ DI + D++S LI YL T +PDPD
Sbjct: 137 TKNNTRINLNFALNYGGRDEIIRAIKLMYSDINKNIIKEEDINSELIENYLYTKGIPDPD 196
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LIIR GE+RLS+FLLWQ AYSEF + WPDF E A++ Y RDRRFG +
Sbjct: 197 LIIRPSGEQRLSNFLLWQCAYSEFWYSDINWPDFKEEDLRRAISDYQNRDRRFGKVK 253
>gi|152979620|ref|YP_001345249.1| undecaprenyl diphosphate synthase [Actinobacillus succinogenes
130Z]
gi|150841343|gb|ABR75314.1| undecaprenyl diphosphate synthase [Actinobacillus succinogenes
130Z]
Length = 239
Score = 304 bits (778), Expect = 8e-81, Method: Composition-based stats.
Identities = 91/236 (38%), Positives = 137/236 (58%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + S++ P H+ IIMDGNGRWA +G R GH G++ VA A G++ LT++
Sbjct: 1 MKELNSNNIPKHVAIIMDGNGRWAKQQGKIRVFGHSNGVKAVRRSVAYALRTGVQVLTLY 60
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP +E+S L+ L L + L KNNIK++V+G++ + + +++AE
Sbjct: 61 AFSSENWNRPEAEVSALMTLFMQALDREAKKLHKNNIKLQVLGDKSGFSEKLQEKIEKAE 120
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T NT L + +A NY +I +A K + + G + D+ L + L T + P
Sbjct: 121 KLTENNTALIMNVAANYGGCWDIVQATKKLAAQTKEGKLEVDDITEELFQRNLVTKEQPM 180
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRT GE+R+S+FLLWQ+AY+E F WPDF + F A+ + R+RRFG
Sbjct: 181 VDLLIRTSGEQRISNFLLWQIAYAELYFSDVLWPDFDEKEFNRAIFTFQQRERRFG 236
>gi|293570619|ref|ZP_06681670.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
E980]
gi|291609290|gb|EFF38561.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
E980]
Length = 270
Score = 304 bits (778), Expect = 8e-81, Method: Composition-based stats.
Identities = 105/238 (44%), Positives = 146/238 (61%), Gaps = 4/238 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
P H+ IIMDGNGRWA R LPR AGH++G+E ++ A+ +G+K LT++AFS N
Sbjct: 24 GPIPQHVAIIMDGNGRWAQNRRLPRVAGHKEGMETVKKVTKKASRLGVKVLTLYAFSTEN 83
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W+RP E+S L++L F L K N+KV V+G L + +K A +QT+ N
Sbjct: 84 WKRPKDEVSFLMQLPVDFFDTFVPELIKENVKVHVMGYENVLPEHTQDAVKRAIEQTKDN 143
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPD 183
TG+ L A NY SR EI A++ I +++ G + + ++D LIA +L T +P DP+
Sbjct: 144 TGMVLNFALNYGSRAEIVTAVQKIAEEVAKGEIQAEEIDDELIANHLMTGFLPKELQDPE 203
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
L+IRT GE+R+S+FLLWQ+AYSE F WPDF A+ Y RDRRFGG+ K
Sbjct: 204 LMIRTSGEERISNFLLWQIAYSELYFTKALWPDFDGAHLEEAIASYQNRDRRFGGVKK 261
>gi|327189226|gb|EGE56405.1| undecaprenyl pyrophosphate synthetase protein [Rhizobium etli
CNPAF512]
Length = 247
Score = 304 bits (778), Expect = 8e-81, Method: Composition-based stats.
Identities = 135/234 (57%), Positives = 177/234 (75%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P+H+ IIMDGNGRWA RGLPR GHRKG+E E V AA GIK LT+FAFS NWR
Sbjct: 9 VPEHVAIIMDGNGRWAKQRGLPRTMGHRKGVEAVRETVRAAGAAGIKYLTLFAFSSENWR 68
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP +E+S+L+ L+K+F+++ L + N+++RVIG+R SL DIL +L EAE+ T+ NT
Sbjct: 69 RPEAEVSDLLGLLKAFIRRDLAELHRQNVRIRVIGDRHSLRSDILGLLLEAEETTKDNTA 128
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L IAFNY SRDEISRA+ ++ +D+E+G + + D+ +L+ LDT+ +PDPDLIIRT
Sbjct: 129 LTLVIAFNYGSRDEISRAVVSLARDVEAGRLRAQDITPALLDARLDTAGIPDPDLIIRTS 188
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
GE+RLS+FLLWQ AYSEF+F+PEYWPDFS E+F AL ++ RDRRFGGLS +
Sbjct: 189 GEERLSNFLLWQAAYSEFIFVPEYWPDFSPEIFRSALEKFASRDRRFGGLSSQA 242
>gi|210622739|ref|ZP_03293331.1| hypothetical protein CLOHIR_01279 [Clostridium hiranonis DSM 13275]
gi|210154071|gb|EEA85077.1| hypothetical protein CLOHIR_01279 [Clostridium hiranonis DSM 13275]
Length = 243
Score = 304 bits (778), Expect = 8e-81, Method: Composition-based stats.
Identities = 103/236 (43%), Positives = 151/236 (63%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IIMDGNGRWA +R LPR AGH+ G+E ++V A +GI+ LT++AFS
Sbjct: 8 IDLENMPTHIAIIMDGNGRWAKSRFLPRTAGHKAGVETIRKVVKEADRLGIQYLTLYAFS 67
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+ L+ L+ ++L+ L KNN+K+ +G+ L + + L A D+T
Sbjct: 68 TENWKRPKLEVDALMNLLVTYLRNEIDELHKNNVKLTAVGDFEKLPEACVKELHSAMDKT 127
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NTG++L +A NY R++I A+ I ++ + G + D+ I K+L T ++PDPDL
Sbjct: 128 KDNTGVHLNLALNYGGRNDIREAVVEIAKEYKEGKISLEDITEERIKKHLSTGEIPDPDL 187
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
+IRT GE+RLS+FLLW +AYSEF + +WPDF E A+ Y RDRRFGG+
Sbjct: 188 VIRTSGEQRLSNFLLWDIAYSEFYYTDIHWPDFDGEALEKAIYAYQKRDRRFGGVK 243
>gi|296330868|ref|ZP_06873343.1| undecaprenyl pyrophosphate synthase [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305674386|ref|YP_003866058.1| undecaprenyl pyrophosphate synthase [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296151873|gb|EFG92747.1| undecaprenyl pyrophosphate synthase [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305412630|gb|ADM37749.1| undecaprenyl pyrophosphate synthase [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 260
Score = 304 bits (778), Expect = 8e-81, Method: Composition-based stats.
Identities = 108/235 (45%), Positives = 149/235 (63%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
++ P+HI IIMDGNGRWA R LPR AGH +G++V A E+G+K LT++AFS
Sbjct: 26 ILKGEIPEHIAIIMDGNGRWAKKRSLPRIAGHHEGMKVVKRTTKLANELGVKVLTLYAFS 85
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+ L+KL + FL L + N++VR+IG++ +L L +++A + T
Sbjct: 86 TENWKRPKMEVDFLMKLPEEFLNTYLPELVEENVQVRIIGDKTALPAHTLRAIEKAVEDT 145
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N G+ L A NY R EI A K + + ++ GS+ D+D SL + YL T + DP+L
Sbjct: 146 AQNDGMILNFALNYGGRTEIVTAAKTLAEKVKDGSLNIEDIDESLFSNYLMTESLQDPEL 205
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE RLS+F+LWQVAYSEFVF WPDF + F AL +Y R RRFGG+
Sbjct: 206 LIRTSGEIRLSNFMLWQVAYSEFVFTDVLWPDFKEDHFLQALGEYQQRGRRFGGI 260
>gi|325292741|ref|YP_004278605.1| Undecaprenyl pyrophosphate synthase [Agrobacterium sp. H13-3]
gi|325060594|gb|ADY64285.1| Undecaprenyl pyrophosphate synthase [Agrobacterium sp. H13-3]
Length = 247
Score = 304 bits (778), Expect = 9e-81, Method: Composition-based stats.
Identities = 131/235 (55%), Positives = 173/235 (73%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
SS P+H+ IIMDGNGRWA RGLPR GHR+G+E E V AA + G++ LT+FAFS N
Sbjct: 7 SSIPEHVAIIMDGNGRWAKQRGLPRVMGHRRGVEAVRETVRAAGDCGVRYLTLFAFSSEN 66
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP SE+S+L+ L+K+F+++ L + N++VR+IG+R L +DI +L+EAE T N
Sbjct: 67 WRRPESEVSDLMGLLKAFIRRDLAELHRENVRVRIIGDRQGLKNDIRSLLEEAEHMTADN 126
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T L L IAFNY SRDEI+RA I +D+ G + + + +I+ LDTS +PDPDLIIR
Sbjct: 127 TRLTLVIAFNYGSRDEIARATMAIARDVAEGRLDAESITPEIISARLDTSGIPDPDLIIR 186
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
T GE+RLS+FLLWQ AYSEF+F+PEYWPDF R+ FF A+ QY RDRRFG L+++
Sbjct: 187 TSGEERLSNFLLWQAAYSEFLFVPEYWPDFDRQRFFSAIEQYATRDRRFGALAEQ 241
>gi|94989307|ref|YP_597408.1| undecaprenyl pyrophosphate synthase [Streptococcus pyogenes
MGAS9429]
gi|94993196|ref|YP_601295.1| undecaprenyl pyrophosphate synthase [Streptococcus pyogenes
MGAS2096]
gi|94542815|gb|ABF32864.1| undecaprenyl pyrophosphate synthetase [Streptococcus pyogenes
MGAS9429]
gi|94546704|gb|ABF36751.1| Undecaprenyl pyrophosphate synthetase [Streptococcus pyogenes
MGAS2096]
Length = 249
Score = 304 bits (778), Expect = 9e-81, Method: Composition-based stats.
Identities = 112/236 (47%), Positives = 144/236 (61%), Gaps = 4/236 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P HIGIIMDGNGRWA R PR GH+ G++ E+ A+E+G+K LT++AFS N
Sbjct: 14 GSIPKHIGIIMDGNGRWAKKRLKPRVFGHKAGMDALQEVTITASELGVKVLTVYAFSTEN 73
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP E+S ++ L +F K L +NN+K+++IG L +D L L A D+T+ N
Sbjct: 74 WSRPQDEVSFIMNLPVTFFDKYVPVLHENNVKIQMIGETSRLPEDTLAALNAAIDKTKRN 133
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPD 183
TGL L A NY R EI+ A++ I QD+ + D+ LIA YL T +P DPD
Sbjct: 134 TGLILNFALNYGGRAEITSAVRFIAQDVLDAKLNPGDITEDLIANYLMTDHLPYLYRDPD 193
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
LIIRT GE RLS+FL WQ AYSEF F P WPDF + A+ YN R RRFG +
Sbjct: 194 LIIRTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKAELLKAIADYNHRQRRFGKV 249
>gi|319649530|ref|ZP_08003686.1| UppS protein [Bacillus sp. 2_A_57_CT2]
gi|317398692|gb|EFV79374.1| UppS protein [Bacillus sp. 2_A_57_CT2]
Length = 259
Score = 304 bits (778), Expect = 9e-81, Method: Composition-based stats.
Identities = 103/239 (43%), Positives = 149/239 (62%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
V + P+H+ IIMDGNGRWA R LPR AGH +G++V +I A+++G+K LT++
Sbjct: 21 VEKIKELQIPEHVAIIMDGNGRWAKKRALPRVAGHHEGMKVVRKITRFASDIGVKTLTLY 80
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E+ L+KL + FL L + N++VR+IG L + +A
Sbjct: 81 AFSTENWKRPKMEVDFLMKLPEEFLGTFLPELVEENVQVRMIGYFDHLPAHTRNAVSKAM 140
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T+ NTGL L A NY SR EI A+K++ D +SG + ++++ + YL T + D
Sbjct: 141 EETKNNTGLVLNFALNYGSRAEILEAVKHVLNDCKSGIMDENELNEEKFSSYLMTGGLQD 200
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
PDL+IRT GE RLS+F+LWQ+AY+EF F WPDF+ E A+ + R RRFGG+
Sbjct: 201 PDLLIRTSGEIRLSNFMLWQLAYTEFWFTDVLWPDFNEEQMLEAIEVFQSRQRRFGGVQ 259
>gi|312885973|ref|ZP_07745601.1| undecaprenyl diphosphate synthase [Mucilaginibacter paludis DSM
18603]
gi|311301510|gb|EFQ78551.1| undecaprenyl diphosphate synthase [Mucilaginibacter paludis DSM
18603]
Length = 246
Score = 304 bits (778), Expect = 9e-81, Method: Composition-based stats.
Identities = 100/240 (41%), Positives = 150/240 (62%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ ++ P HI +IMDGNGRWA +G R GH G+ ++V A E+GIK LT++
Sbjct: 5 EQIDTARLPQHIAVIMDGNGRWAKGKGKLRVFGHHNGVLSVRDVVEGAGELGIKYLTLYT 64
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RP E++ +++L+ S + K L NN+++ IG+ L L A
Sbjct: 65 FSSENWNRPKFEVTAIMELLISTINKEIRKLMDNNVRLNTIGDMDMLPAKCSAELNNAIT 124
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
QT NTGL L +A +YSSR EI +A + I + +ESG + + D+ + +++L TS++PDP
Sbjct: 125 QTAGNTGLVLTLALSYSSRREIVQATQAIARKVESGELKAADITEEVFSQHLHTSNLPDP 184
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+L+IRT GE R+S++LLWQ+AY+E F + WPDF RE F A+ Y R+RRFG +S++
Sbjct: 185 ELLIRTSGEYRISNYLLWQIAYAELYFTDKLWPDFRREDLFEAILDYQKRERRFGMISEQ 244
>gi|228473522|ref|ZP_04058275.1| undecaprenyl pyrophosphate synthetase 1 [Capnocytophaga gingivalis
ATCC 33624]
gi|228275129|gb|EEK13932.1| undecaprenyl pyrophosphate synthetase 1 [Capnocytophaga gingivalis
ATCC 33624]
Length = 242
Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats.
Identities = 92/238 (38%), Positives = 140/238 (58%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ S P H+ IIMDGNGRWA RG R GH KG + EI+ ++GI LT++ FS
Sbjct: 3 IESKMLPRHLAIIMDGNGRWAKQRGKQRILGHEKGAKTVREIIQEVTQLGIPYLTLYTFS 62
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+ L+ L+ +LKK +++NN+++ IG+ SL I L +A + T
Sbjct: 63 TENWKRPKLEVEALMHLLSRYLKKEVEIMQQNNVRLNAIGDLESLPSKIQKELHKAMEAT 122
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NT + +A Y + EI + +++I + ++ G + ++ + + L T ++P DL
Sbjct: 123 KGNTKTVVSLALGYGGQQEILQMVQHIARKVQQGELSLDEITAERVQAALYTKEIPPVDL 182
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IRT GE R+S+FLLWQ+AY+E F WPDFS E AL Y R+RRFG S++
Sbjct: 183 LIRTSGECRISNFLLWQIAYAELYFTDVLWPDFSSEELHKALFNYQNRERRFGKTSEQ 240
>gi|188586059|ref|YP_001917604.1| Undecaprenyl pyrophosphate synthetase [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179350746|gb|ACB85016.1| Undecaprenyl pyrophosphate synthetase [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 247
Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats.
Identities = 102/239 (42%), Positives = 153/239 (64%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + + P HI IIMDGNGRWA +R LPR AGHR G+E + + E+GI+ +T+F
Sbjct: 8 LNKIDYQNVPRHIAIIMDGNGRWAKSRALPRIAGHRAGVEAIKRVSEISQEIGIEIITMF 67
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E+ L+ L K +LKK +LK+NNIK+ ++G+ ++ L V+++
Sbjct: 68 AFSTENWKRPKKEVEFLMSLPKEYLKKELQNLKENNIKITIMGDTSAIPAKTLEVIEQGV 127
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T+ NT LNL A NY R EI +A++ I + + +I+++L ++PD
Sbjct: 128 EETKNNTALNLNFALNYGGRAEIVQAVRKIAAKASDREIDPKTISEDIISQHLYNPEIPD 187
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
PDL+IR+ GE+RLS+FLLWQ+AYSE F YWPDF +E A+ Y R+R+FGG++
Sbjct: 188 PDLMIRSSGEQRLSNFLLWQLAYSELWFPEVYWPDFQKEHLLQAVLAYQNRERKFGGVN 246
>gi|16800420|ref|NP_470688.1| undecaprenyl pyrophosphate synthase [Listeria innocua Clip11262]
gi|42559857|sp|Q92C39|UPPS_LISIN RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|16413825|emb|CAC96583.1| lin1352 [Listeria innocua Clip11262]
Length = 252
Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats.
Identities = 102/231 (44%), Positives = 140/231 (60%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ IIMDGNGRWA R LPR AGH++G++V + A +GI LT++AFS NW
Sbjct: 22 PIPRHVAIIMDGNGRWAKKRFLPRIAGHKEGMDVVKRVTRYANAIGIDVLTLYAFSTENW 81
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP E+ L+KL F L + N++V V+G R +L + + +++A T T
Sbjct: 82 KRPTDEVDFLMKLPVEFFDSFVPELIEENVRVNVMGYRENLPEHTMRAVEKAIADTAHCT 141
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL L A NY R EI A K +++ S S D+ L+ +L + + DPDL+IRT
Sbjct: 142 GLTLNFALNYGGRSEIITAAKEAMKELVSEGKTSEDLTEELLNDHLMSHGLGDPDLLIRT 201
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE RLS+F+LWQ+AYSEF F +WPDFS+E F A+ +Y R RRFGGL
Sbjct: 202 SGELRLSNFMLWQLAYSEFYFTETHWPDFSKEDFLQAIIEYQNRSRRFGGL 252
>gi|120434582|ref|YP_860274.1| undecaprenyl-pyrophosphate synthetase [Gramella forsetii KT0803]
gi|117576732|emb|CAL65201.1| undecaprenyl-pyrophosphate synthetase [Gramella forsetii KT0803]
Length = 246
Score = 303 bits (777), Expect = 1e-80, Method: Composition-based stats.
Identities = 106/239 (44%), Positives = 152/239 (63%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ P HI IIMDGNGRWA +G R +GH++G + ++V AE+G+KNLT++AF
Sbjct: 6 NLNLDKLPKHIAIIMDGNGRWAKQKGFLRASGHKEGTKAVRDVVEGCAEIGVKNLTLYAF 65
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP E+ L+KL+ S LKK +LK NNIK+ IGN SL L + ++
Sbjct: 66 STENWNRPKLEVDTLMKLLVSSLKKEIKTLKDNNIKLNCIGNISSLPKKARQELLDVIEK 125
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NT + L +A +Y SR+EI+ IK I ++S + +D S+I ++L T ++PD D
Sbjct: 126 TSTNTQMTLTLALSYGSREEITNCIKQIATKVKSEELSEDAIDESVINEHLYTRNLPDVD 185
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRT GE+R+S+FLLWQ+AY+E F WPD+ RE F A+ Y R+RRFG S++
Sbjct: 186 LLIRTSGEQRISNFLLWQIAYAELYFTKILWPDYRRENLFEAIYNYQNRERRFGKTSEQ 244
>gi|190891611|ref|YP_001978153.1| undecaprenyl pyrophosphate synthetase [Rhizobium etli CIAT 652]
gi|190696890|gb|ACE90975.1| undecaprenyl pyrophosphate synthetase protein [Rhizobium etli CIAT
652]
Length = 247
Score = 303 bits (777), Expect = 1e-80, Method: Composition-based stats.
Identities = 135/234 (57%), Positives = 177/234 (75%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P+H+ IIMDGNGRWA RGLPR GHRKG+E E V AA GIK LT+FAFS NWR
Sbjct: 9 VPEHVAIIMDGNGRWAKQRGLPRTMGHRKGVEAVRETVRAAGAAGIKYLTLFAFSSENWR 68
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP +E+S+L+ L+K+F+++ L + N+++RVIG+R SL DIL +L EAE+ T+ NT
Sbjct: 69 RPEAEVSDLLGLLKAFIRRDLAELHRQNVRIRVIGDRHSLRSDILGLLLEAEETTKDNTA 128
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L IAFNY SRDEISRA+ ++ +D+E+G + + D+ +L+ LDT+ +PDPDLIIRT
Sbjct: 129 LTLVIAFNYGSRDEISRAVVSLARDVEAGRLRAQDITPALLDARLDTAGIPDPDLIIRTS 188
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
GE+RLS+FLLWQ AYSEF+F+PEYWPDFS E+F AL ++ RDRRFGGLS +
Sbjct: 189 GEERLSNFLLWQAAYSEFIFVPEYWPDFSPEIFRSALEKFASRDRRFGGLSSQA 242
>gi|146297353|ref|YP_001181124.1| undecaprenyl diphosphate synthase [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145410929|gb|ABP67933.1| Undecaprenyl pyrophosphate synthetase [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 248
Score = 303 bits (777), Expect = 1e-80, Method: Composition-based stats.
Identities = 110/237 (46%), Positives = 149/237 (62%), Gaps = 1/237 (0%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P HI IIMDGNGRWA RGLPR AGHR G + EI+ A E+G+K +T++AFS
Sbjct: 12 IDKEKMPRHIAIIMDGNGRWAKKRGLPRSAGHRFGAQKLREIILFADEIGLKYITVYAFS 71
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSL-KKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
NW+RP E+ L+ L++ F +L K I++RVIG+ LD DI + AE++
Sbjct: 72 TENWKRPKDEVENLMNLLREFFDTEIENLINKTQIRIRVIGDISKLDKDIQERIISAEER 131
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ TGL + IA NY R EI A+KN+ DI+SG + ++ L YL T D+PDPD
Sbjct: 132 TKDKTGLCVVIALNYGGRSEIVNAVKNLALDIKSGKIDIEAINEELFKNYLYTKDIPDPD 191
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
L+IR GE R+S+FLLWQ++Y+EF F WPDF +E A+ Y R+RRFGG+
Sbjct: 192 LLIRPSGEMRVSNFLLWQISYTEFWFSNVLWPDFKKEHLLKAIEDYQKRERRFGGVK 248
>gi|170760817|ref|YP_001787742.1| undecaprenyl diphosphate synthase [Clostridium botulinum A3 str.
Loch Maree]
gi|169407806|gb|ACA56217.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum
A3 str. Loch Maree]
Length = 252
Score = 303 bits (777), Expect = 1e-80, Method: Composition-based stats.
Identities = 111/237 (46%), Positives = 154/237 (64%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ ++ P HI IIMDGNGRWA R LPR GH+ G+E EIV +G+K LT++AF
Sbjct: 16 NLDMNNIPKHIAIIMDGNGRWAKERSLPRTMGHKAGVETIREIVKECNNLGVKYLTLYAF 75
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP E+S L+ L+ +L+K L +NN+ V IGN L + + L++A ++
Sbjct: 76 STENWKRPKDEVSALMTLLVQYLRKEVKELNENNVIVNAIGNIEKLPEVCIKELEKAYEE 135
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NTGL L +A NY RDEI RA+K +++DI+ G + +++ LI+ YL T D+ DPD
Sbjct: 136 TKDNTGLVLNLALNYGGRDEIIRAVKYMYEDIKVGKIKEEEINEELISNYLYTKDMLDPD 195
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LIIR GEKR+S+FLLWQ AYSEF + WPDF +E A+ Y RDRRFG +
Sbjct: 196 LIIRPSGEKRISNFLLWQCAYSEFWYSDIKWPDFKKEHLHKAIYDYQNRDRRFGTVK 252
>gi|256420097|ref|YP_003120750.1| undecaprenyl diphosphate synthase [Chitinophaga pinensis DSM 2588]
gi|256035005|gb|ACU58549.1| undecaprenyl diphosphate synthase [Chitinophaga pinensis DSM 2588]
Length = 253
Score = 303 bits (777), Expect = 1e-80, Method: Composition-based stats.
Identities = 105/242 (43%), Positives = 151/242 (62%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P HI IIMDGNGRWA RG R GH +G+E I A AE+GI LT+
Sbjct: 3 LKDKLDLQRLPRHIAIIMDGNGRWAKERGQDRLFGHHEGVESVRNITEACAELGIGYLTL 62
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RPV E++ +++L+ + ++ +L KNNI++ VIG+ L + ++EA
Sbjct: 63 YAFSTENWDRPVYEVNGIMELLVNTIRNEVATLMKNNIRLHVIGDMNMLPGNCKNEMEEA 122
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
T NTGLNL +A +YS+R EI A KNI QD++ G + V + KYL T+ +P
Sbjct: 123 MSITSQNTGLNLVMALSYSARWEIVNAAKNIAQDVKDGKLAPEAVTPEMWQKYLCTATLP 182
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DP+L+IRT GE R+S+FLL+Q+AY+E F WPDF +E + A+ + R+RRFG S
Sbjct: 183 DPELMIRTSGECRISNFLLYQLAYAELYFTDTRWPDFRKEHLYEAILNFQNRERRFGKTS 242
Query: 241 KK 242
++
Sbjct: 243 EQ 244
>gi|289434596|ref|YP_003464468.1| undecaprenyl diphosphate synthase [Listeria seeligeri serovar 1/2b
str. SLCC3954]
gi|289170840|emb|CBH27382.1| undecaprenyl diphosphate synthase [Listeria seeligeri serovar 1/2b
str. SLCC3954]
Length = 252
Score = 303 bits (777), Expect = 1e-80, Method: Composition-based stats.
Identities = 102/231 (44%), Positives = 141/231 (61%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ IIMDGNGRWA R LPR AGH++G++V + A +GI LT++AFS NW
Sbjct: 22 PIPRHVAIIMDGNGRWAKKRFLPRIAGHKEGMDVVKRVTRYANAIGIDVLTLYAFSTENW 81
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP E+ L+KL F L + N++V V+G R +L D + +++A T T
Sbjct: 82 KRPTDEVDFLMKLPVEFFDSFVPELIEENVRVNVMGYRENLPDHTMRAVEKAIADTAHCT 141
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL L A NY R EI A K +++ S + D+ ++ +L +S + DPDL+IRT
Sbjct: 142 GLTLNFALNYGGRSEIITAAKEAMKELVSVGKSADDLTEDMLNNHLMSSGLGDPDLLIRT 201
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE RLS+F+LWQ+AYSEF F +WPDFS+E F A+ +Y R RRFGGL
Sbjct: 202 SGELRLSNFMLWQLAYSEFYFTDTHWPDFSKEDFLQAIIEYQNRSRRFGGL 252
>gi|313619143|gb|EFR90929.1| di-trans,poly-cis-decaprenylcistransferase [Listeria innocua FSL
S4-378]
Length = 252
Score = 303 bits (777), Expect = 1e-80, Method: Composition-based stats.
Identities = 102/231 (44%), Positives = 140/231 (60%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ IIMDGNGRWA R LPR AGH++G++V + A +GI LT++AFS NW
Sbjct: 22 PIPRHVAIIMDGNGRWAKKRFLPRIAGHKEGMDVVKRVTRYANAIGIDVLTLYAFSTENW 81
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP E+ L+KL F L + N++V V+G R +L + + +++A T T
Sbjct: 82 KRPTDEVDFLMKLPVEFFDSFVPELIEENVRVNVMGYRENLPEHTMRAVEKAIADTAHCT 141
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL L A NY R EI A K +++ S S D+ L+ +L + + DPDL+IRT
Sbjct: 142 GLTLNFALNYGGRSEIITAAKEAMKELVSEGKSSEDLTEELLNDHLMSHGLGDPDLLIRT 201
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE RLS+F+LWQ+AYSEF F +WPDFS+E F A+ +Y R RRFGGL
Sbjct: 202 SGELRLSNFMLWQLAYSEFYFTETHWPDFSKEDFLQAIIEYQNRSRRFGGL 252
>gi|257878532|ref|ZP_05658185.1| undecaprenyl diphosphate synthase [Enterococcus faecium 1,230,933]
gi|257812760|gb|EEV41518.1| undecaprenyl diphosphate synthase [Enterococcus faecium 1,230,933]
Length = 269
Score = 303 bits (777), Expect = 1e-80, Method: Composition-based stats.
Identities = 106/238 (44%), Positives = 147/238 (61%), Gaps = 4/238 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
P HI IIMDGNGRWA R LPR AGH++G+E ++ A+ +G+K LT++AFS N
Sbjct: 23 GPIPQHIAIIMDGNGRWAQNRRLPRVAGHKEGMETVKKVTKKASRLGVKVLTLYAFSTEN 82
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W+RP E+S L++L F L K N+KV V+G L + ++ A +QT+ N
Sbjct: 83 WKRPKDEVSFLMQLPVDFFDTFVPELIKENVKVHVMGYENVLPEHTQDAVRRAIEQTKNN 142
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPD 183
TG+ L A NY SR EI A++ I +++ G + + ++D LIAK+L T +P DP+
Sbjct: 143 TGMVLNFALNYGSRAEIVTAVQEIAEEVAKGEIHAEEIDDELIAKHLMTGFLPKELQDPE 202
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
L+IRT GE+R+S+FLLWQ+AYSE F WPDF A+ Y RDRRFGG+ K
Sbjct: 203 LMIRTSGEERISNFLLWQIAYSELYFTKALWPDFDGAHLEEAIASYQNRDRRFGGVKK 260
>gi|94991253|ref|YP_599353.1| undecaprenyl pyrophosphate synthase [Streptococcus pyogenes
MGAS10270]
gi|94544761|gb|ABF34809.1| Undecaprenyl pyrophosphate synthetase [Streptococcus pyogenes
MGAS10270]
Length = 249
Score = 303 bits (777), Expect = 1e-80, Method: Composition-based stats.
Identities = 113/236 (47%), Positives = 145/236 (61%), Gaps = 4/236 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P HIGIIMDGNGRWA R PR GH+ G++ E+ A+E+G+K LT++AFS N
Sbjct: 14 GSIPKHIGIIMDGNGRWAKKRLKPRVFGHKAGMDALQEVTITASELGVKVLTVYAFSTEN 73
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP E+S ++ L +F K L +NN+K+++IG L +D L L A D+T+ N
Sbjct: 74 WSRPQDEVSFIMNLPVTFFDKYVPVLHENNVKIQMIGETSRLPEDTLAALNAAIDKTKRN 133
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPD 183
TGL L A NY R EI+ A++ I QD+ + D+ LIA YL T +P DPD
Sbjct: 134 TGLILNFALNYGGRAEITSAVRFIAQDVLDAKLNPGDITEDLIANYLMTDHLPYLYRDPD 193
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
LIIRT GE RLS+FLLWQ AYSEF F P WPDF + A+ YN R RRFG +
Sbjct: 194 LIIRTSGELRLSNFLLWQSAYSEFYFTPVLWPDFKKAELLKAIADYNRRQRRFGKV 249
>gi|15675763|ref|NP_269937.1| undecaprenyl pyrophosphate synthase [Streptococcus pyogenes M1 GAS]
gi|71904326|ref|YP_281129.1| undecaprenyl pyrophosphate synthase [Streptococcus pyogenes
MGAS6180]
gi|71911489|ref|YP_283039.1| undecaprenyl pyrophosphate synthase [Streptococcus pyogenes
MGAS5005]
gi|94995166|ref|YP_603264.1| undecaprenyl pyrophosphate synthase [Streptococcus pyogenes
MGAS10750]
gi|209560103|ref|YP_002286575.1| undecaprenyl pyrophosphate synthase [Streptococcus pyogenes NZ131]
gi|42560009|sp|Q99XY1|UPPS_STRP1 RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|13622985|gb|AAK34658.1| putative undecaprenyl pyrophosphate synthetase [Streptococcus
pyogenes M1 GAS]
gi|71803421|gb|AAX72774.1| undecaprenyl pyrophosphate synthetase [Streptococcus pyogenes
MGAS6180]
gi|71854271|gb|AAZ52294.1| undecaprenyl pyrophosphate synthetase [Streptococcus pyogenes
MGAS5005]
gi|94548674|gb|ABF38720.1| Undecaprenyl pyrophosphate synthetase [Streptococcus pyogenes
MGAS10750]
gi|209541304|gb|ACI61880.1| Undecaprenyl pyrophosphate synthetase [Streptococcus pyogenes
NZ131]
Length = 249
Score = 303 bits (777), Expect = 1e-80, Method: Composition-based stats.
Identities = 112/236 (47%), Positives = 144/236 (61%), Gaps = 4/236 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P HIGIIMDGNGRWA R PR GH+ G++ E+ A+E+G+K LT++AFS N
Sbjct: 14 GSIPKHIGIIMDGNGRWAKKRLKPRVFGHKAGMDALQEVTITASELGVKVLTVYAFSTEN 73
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP E+S ++ L +F K L +NN+K+++IG L +D L L A D+T+ N
Sbjct: 74 WSRPQDEVSFIMNLPVTFFDKYVPVLHENNVKIQMIGETSRLPEDTLAALNAAIDKTKRN 133
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPD 183
TGL L A NY R EI+ A++ I QD+ + D+ LIA YL T +P DPD
Sbjct: 134 TGLILNFALNYGGRAEITSAVRFIAQDVLDAKLNPGDITEDLIANYLMTDHLPYLYRDPD 193
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
LIIRT GE RLS+FL WQ AYSEF F P WPDF + A+ YN R RRFG +
Sbjct: 194 LIIRTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKAELLKAIADYNRRQRRFGKV 249
>gi|229544426|ref|ZP_04433484.1| undecaprenyl diphosphate synthase [Bacillus coagulans 36D1]
gi|229324911|gb|EEN90588.1| undecaprenyl diphosphate synthase [Bacillus coagulans 36D1]
Length = 264
Score = 303 bits (777), Expect = 1e-80, Method: Composition-based stats.
Identities = 105/240 (43%), Positives = 153/240 (63%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ +++ P+H+ IIMDGNGRWA R LPR AGH +G++ +I A +GIK LT++A
Sbjct: 21 EKVKAAAIPEHVAIIMDGNGRWAKKRHLPRVAGHHEGMKTVRKITRIANRLGIKVLTLYA 80
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW+RP E+ L+KL + FL LK N+KV+++G + + + +A
Sbjct: 81 FSTENWKRPKLEVEYLMKLPEEFLSTYLPELKAENVKVQMMGCKEKIPLHTQRAINKAIS 140
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
+T N GL L A NY SRDEI RA++NI D+++G + +++ + +YL T + DP
Sbjct: 141 ETAQNDGLILNFALNYGSRDEIMRAVRNILMDVKNGIMNENELTEEVFHQYLMTHGLQDP 200
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL+IRT GE RLS+F+LWQ+AY+EFVF WPDF+ E F A+ +Y R RR+GGL +
Sbjct: 201 DLLIRTSGEIRLSNFMLWQLAYTEFVFTDVLWPDFNEEHFLSAIEEYQKRSRRYGGLKSE 260
>gi|52425982|ref|YP_089119.1| UppS protein [Mannheimia succiniciproducens MBEL55E]
gi|52308034|gb|AAU38534.1| UppS protein [Mannheimia succiniciproducens MBEL55E]
Length = 238
Score = 303 bits (777), Expect = 1e-80, Method: Composition-based stats.
Identities = 92/236 (38%), Positives = 135/236 (57%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + ++ P HI IIMDGNGRWA +G R GH+ G+ V+ A ++G++ LT++
Sbjct: 1 MKELDLNNIPKHIAIIMDGNGRWAKQQGKMRIFGHKSGVRAVRRSVSYACQIGVQALTLY 60
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E++ L+ L L L KNNIK++V+G+ + + AE
Sbjct: 61 AFSSENWNRPEQEVNALMTLFMQALDLEVKKLHKNNIKLKVLGDISGFSPKLQEKIARAE 120
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T N L L IA NY +I +A + I Q ++ GS+ ++ L + L T + P
Sbjct: 121 TLTANNDSLTLNIAANYGGCWDIVQATRQIAQQVKDGSLTISEITEELFQRNLVTKEQPP 180
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRT GE+R+S+FLLWQ+AY+E F WPDF+ + F A+ Y R+RRFG
Sbjct: 181 VDLLIRTSGEQRISNFLLWQIAYAELYFSHVLWPDFNEQEFNRAIYVYQQRERRFG 236
>gi|229174489|ref|ZP_04302021.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus MM3]
gi|228609049|gb|EEK66339.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus MM3]
Length = 235
Score = 303 bits (777), Expect = 1e-80, Method: Composition-based stats.
Identities = 106/235 (45%), Positives = 153/235 (65%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M P+HI IIMDGNGRWA R +PR AGH +G++V +I A+++ +K LT++AFS
Sbjct: 1 MKKGYIPEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLNVKVLTLYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+ L++L + FL L + N++VRVIG + L +++A + T
Sbjct: 61 TENWKRPKKEVDYLMRLPEEFLGTFLPELIEENVQVRVIGQQDRLPTHTRRAMEKAMEDT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NTGL L A NY SRDEI A++++ +D E G + DV +++ YL TS +PDP+L
Sbjct: 121 KENTGLILNFALNYGSRDEIVSAVQHMVKDSEEGKIRVEDVSEEMLSSYLMTSSLPDPEL 180
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE R+S+F+LWQ+AYSEF F YWPDF+ E +A+ + R RRFGG+
Sbjct: 181 LIRTSGELRISNFMLWQIAYSEFWFTDVYWPDFTEEHLLNAITDFQHRGRRFGGV 235
>gi|319953661|ref|YP_004164928.1| undecaprenyl pyrophosphate synthase [Cellulophaga algicola DSM
14237]
gi|319422321|gb|ADV49430.1| Undecaprenyl pyrophosphate synthase [Cellulophaga algicola DSM
14237]
Length = 246
Score = 303 bits (777), Expect = 1e-80, Method: Composition-based stats.
Identities = 94/241 (39%), Positives = 144/241 (59%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ ++ + P H+ IIMDGNGRWA G R GH G++ ++V + ++ I LT++
Sbjct: 4 IENIDKTKLPKHLAIIMDGNGRWAKQHGKLRVFGHENGVKTVRDVVESCVKMKIPYLTLY 63
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
FS NW+RP EI L++L+ S L+K S N IK+ IGN SL L +
Sbjct: 64 TFSTENWKRPKFEIDTLMRLLVSSLRKELPSFMDNGIKLNTIGNIASLPKRAHKELLDVI 123
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T NTG+ L +A +Y +R+E+ AI+ I +++ + S ++D ++I +L T D+PD
Sbjct: 124 QKTSSNTGMTLTLALSYGAREELQNAIREISIKVKNNIISSENIDETIINTHLYTHDLPD 183
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRT GE R+S+FLLWQ+AY+E F WPDF+ + A+ Y R+RRFG S+
Sbjct: 184 VDLLIRTSGEHRISNFLLWQIAYAELYFTNVLWPDFTEQHLVEAILNYQNRERRFGKTSE 243
Query: 242 K 242
+
Sbjct: 244 Q 244
>gi|154253631|ref|YP_001414455.1| undecaprenyl diphosphate synthase [Parvibaculum lavamentivorans
DS-1]
gi|154157581|gb|ABS64798.1| undecaprenyl diphosphate synthase [Parvibaculum lavamentivorans
DS-1]
Length = 254
Score = 303 bits (777), Expect = 1e-80, Method: Composition-based stats.
Identities = 113/240 (47%), Positives = 163/240 (67%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
++ + PP H+ IIMDGNGRWAA R LPR AGHR+G+E IV AA E+GI+ LT++
Sbjct: 8 MSDIAPGKPPRHVAIIMDGNGRWAAKRHLPRAAGHRQGVETVRVIVRAAGELGIEYLTLY 67
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
FS NW+RPV E+++L+ L++ F+++ L +N ++VR+IG R LD DI+ ++ EAE
Sbjct: 68 GFSSENWKRPVEEVNDLMGLLRLFIRRDLAELHQNGVRVRIIGERDHLDADIVALIDEAE 127
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
TR N L L IAFNY ++EI+ A + + ++++G + + I+ +LDT+ VPD
Sbjct: 128 ALTRSNDRLQLVIAFNYGGQNEIASAARRMAYEVKAGRLDPEAISPETISGFLDTAGVPD 187
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDLIIRT GEKRLS+FL+WQ AYSE VF +WPDF+ + A+ +Y R RRFG + +
Sbjct: 188 PDLIIRTSGEKRLSNFLIWQSAYSELVFSDIFWPDFTPDCLRDAVAEYQRRSRRFGAVGE 247
>gi|332289932|ref|YP_004420784.1| undecaprenyl pyrophosphate synthase [Gallibacterium anatis UMN179]
gi|330432828|gb|AEC17887.1| undecaprenyl pyrophosphate synthase [Gallibacterium anatis UMN179]
Length = 241
Score = 303 bits (777), Expect = 1e-80, Method: Composition-based stats.
Identities = 103/239 (43%), Positives = 145/239 (60%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
S+ P H+ IIMDGNGRWA +G R GHR G + V AA+ GIK LT++A
Sbjct: 1 MSLDPEKIPQHVAIIMDGNGRWAKQKGKLRVFGHRNGAQAVKRAVYYAAQTGIKYLTLYA 60
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW+RP +E++ L+ L L L KNNI++ ++G+ + + + A+
Sbjct: 61 FSSENWQRPENEVNALMDLFIRMLDLEVNKLHKNNIRLNILGDISRFSEGLQKRIHHAQQ 120
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T+ NT L L IA NY R +I +A K + +D+++ ++ +VD +L + YL T+D P
Sbjct: 121 LTQNNTQLTLNIAANYGGRWDILQAAKQMCRDVQTNNLELENVDEALFSHYLTTADQPMV 180
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRT GE+R+S+FLLWQ AY+EF F WPDFS + F AL Y R+RRFG LSK
Sbjct: 181 DLLIRTSGEQRISNFLLWQAAYAEFYFTEVLWPDFSEQEFEQALYFYQQRERRFGALSK 239
>gi|257464981|ref|ZP_05629352.1| undecaprenyl pyrophosphate synthetase [Actinobacillus minor 202]
gi|257450641|gb|EEV24684.1| undecaprenyl pyrophosphate synthetase [Actinobacillus minor 202]
Length = 237
Score = 303 bits (777), Expect = 1e-80, Method: Composition-based stats.
Identities = 98/236 (41%), Positives = 143/236 (60%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ + P H+ IIMDGNGRWA +G R GH+ G++ V+ AA+ GIK LT++A
Sbjct: 1 MNFDPQNMPKHVAIIMDGNGRWAKQQGKLRVFGHQNGVKAVRSAVSFAAKHGIKVLTLYA 60
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RP +E+S L+ L L L KNNI++++IG++ + + + E+E
Sbjct: 61 FSSENWSRPEAEVSALMALFMKALDSEVKKLHKNNIRLKIIGDKSGFSETLQKRITESEQ 120
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTGL L IA NY S +I++A + + ++ G + D+ +L L T D P
Sbjct: 121 LTATNTGLILNIAANYGSYWDITQAAQKMAVKVKLGEISVSDITPTLFQNELVTEDQPQV 180
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DL+IRT GE+R+S+FLLWQ+AY+E F P WPDF+ ++F A+ Y R+RRFGG
Sbjct: 181 DLLIRTSGEQRISNFLLWQIAYAELFFTPVLWPDFNDQVFSEAIMAYQQRERRFGG 236
>gi|91216697|ref|ZP_01253662.1| undecaprenyl diphosphate synthase [Psychroflexus torquis ATCC
700755]
gi|91185166|gb|EAS71544.1| undecaprenyl diphosphate synthase [Psychroflexus torquis ATCC
700755]
Length = 245
Score = 303 bits (777), Expect = 1e-80, Method: Composition-based stats.
Identities = 101/240 (42%), Positives = 154/240 (64%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+++ P H+ IIMDGNGRWA +GL R GH KG + E V ++AE+GI+NLT++A
Sbjct: 5 SNINVEKLPKHVAIIMDGNGRWAKKQGLMRVRGHEKGTKAVRETVESSAELGIENLTLYA 64
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RP EI L++L+ S LK +L+ N I+++ IG +L LKE +
Sbjct: 65 FSTENWNRPKLEIQTLMRLLVSSLKDEIKTLQDNKIRLQAIGCIENLPTKAKKELKEVIE 124
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
+T N+ + L +A +Y +R+E+ +A+K I Q +++ + S +D S I +L T ++PD
Sbjct: 125 KTANNSRMTLTLALSYGAREEMIQAVKQISQKVKNNIIDSETIDESTINNHLYTRNLPDV 184
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
D++IRT GE+R+S+FLLWQ+AY+E F WPDF +E F A+ +Y R+RRFG S++
Sbjct: 185 DMMIRTSGEQRISNFLLWQMAYAELYFTETLWPDFRKENLFEAIYEYQKRERRFGKTSEQ 244
>gi|189502171|ref|YP_001957888.1| hypothetical protein Aasi_0781 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497612|gb|ACE06159.1| hypothetical protein Aasi_0781 [Candidatus Amoebophilus asiaticus
5a2]
Length = 288
Score = 303 bits (776), Expect = 1e-80, Method: Composition-based stats.
Identities = 101/242 (41%), Positives = 151/242 (62%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ A + P HI ++MDGNGRWAA +G PR GH ++ E + A E+ I LT+
Sbjct: 46 LKARIALDKLPQHIAVMMDGNGRWAAKQGKPRVFGHMSSLQSVEETITACVELNIPYLTL 105
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW RP E++ L++L + ++ L +NNIK++VIG+ L + L A
Sbjct: 106 FAFSTENWERPQEEVNTLMQLFVTTIRDKLQELVENNIKLKVIGDINRLPKECQIALNNA 165
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
T+ N GL L +A +YS + +I +A+K + + V D+++ + YL TS++P
Sbjct: 166 IQATKDNKGLCLIVALSYSGKWDIIQAVKTLAHETLIHKVKPDDINAEIFQHYLSTSEIP 225
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRTGG+ R+S+FLLWQ+AY+E VF+ +YWP+F +E F+ AL Y RDRRFG +
Sbjct: 226 DPDLLIRTGGDIRISNFLLWQLAYTELVFVDKYWPEFRKEDFYKALINYQQRDRRFGKII 285
Query: 241 KK 242
+K
Sbjct: 286 RK 287
>gi|255012462|ref|ZP_05284588.1| undecaprenyl pyrophosphate synthetase [Bacteroides sp. 2_1_7]
gi|262382445|ref|ZP_06075582.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides sp.
2_1_33B]
gi|262295323|gb|EEY83254.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides sp.
2_1_33B]
Length = 247
Score = 303 bits (776), Expect = 1e-80, Method: Composition-based stats.
Identities = 97/242 (40%), Positives = 154/242 (63%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + + P H+ IIMDGNGRWA A+G R GH++G+ +I+ A ++G+K LT+
Sbjct: 3 LIEKIDKNRLPRHVAIIMDGNGRWAKAKGKDRSFGHQEGVVSVRKIMDAVTQLGLKYLTL 62
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW RP E+ L+ L+ S + + + K N+++ IG+ L +D L+E
Sbjct: 63 YTFSTENWNRPEEEVQALMSLLVSAIHRETPDMMKKNVRLTAIGDLSRLREDAYNTLQEC 122
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
D T NTG L +A +YSSR EI+RA + + Q++ + +D+ ++++ +L T ++P
Sbjct: 123 IDMTSANTGTTLVLALSYSSRWEITRAARQLAQEVLEQKINPNDITEAMVSDHLTTKNIP 182
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRTGGEKR+S+FLLWQ++Y+EF F +WPDF E + A+ Y R+RRFG S
Sbjct: 183 DPDLLIRTGGEKRISNFLLWQLSYAEFFFTDVFWPDFREEELYEAILYYQQRERRFGKTS 242
Query: 241 KK 242
++
Sbjct: 243 EQ 244
>gi|251797407|ref|YP_003012138.1| undecaprenyl diphosphate synthase [Paenibacillus sp. JDR-2]
gi|247545033|gb|ACT02052.1| undecaprenyl diphosphate synthase [Paenibacillus sp. JDR-2]
Length = 254
Score = 303 bits (776), Expect = 1e-80, Method: Composition-based stats.
Identities = 107/235 (45%), Positives = 150/235 (63%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + + P HI IIMDGNGRWA RGLPR AGH G++ IV A +G+K LT++AFS
Sbjct: 20 LAADNVPKHIAIIMDGNGRWAKKRGLPRIAGHHTGMKTVKRIVMEADRLGVKYLTLYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+ L+KL + FL+ L + N++VR++G++ +L L ++EA +T
Sbjct: 80 TENWKRPKDEVEFLMKLPQQFLEIELAELIEKNVQVRMMGHKENLPSFTLSAVEEAITKT 139
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NTGL L A NY R E+ AIK I D++ G + + +D L++ L + D+PDPDL
Sbjct: 140 ANNTGLVLNFALNYGGRREMLEAIKEIAADVQDGRLSTEQIDEQLLSSRLLSGDIPDPDL 199
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE RLS+F+LWQ+AYSE F YWP+FS A+ +Y R RR+GGL
Sbjct: 200 LIRTSGELRLSNFMLWQLAYSEMWFTNVYWPEFSEAHLQEAIQEYQRRARRYGGL 254
>gi|29349134|ref|NP_812637.1| undecaprenyl pyrophosphate synthase [Bacteroides thetaiotaomicron
VPI-5482]
gi|253571297|ref|ZP_04848704.1| undecaprenyl pyrophosphate synthetase [Bacteroides sp. 1_1_6]
gi|42559810|sp|Q8A1E0|UPPS_BACTN RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|29341041|gb|AAO78831.1| undecaprenyl pyrophosphate synthetase [Bacteroides thetaiotaomicron
VPI-5482]
gi|251839250|gb|EES67334.1| undecaprenyl pyrophosphate synthetase [Bacteroides sp. 1_1_6]
Length = 244
Score = 303 bits (776), Expect = 1e-80, Method: Composition-based stats.
Identities = 100/241 (41%), Positives = 148/241 (61%), Gaps = 2/241 (0%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + + P HI IIMDGNGRWA RG R GH+ G E ++I+ AA +G+K LT++
Sbjct: 4 IEKIDKNRIPQHIAIIMDGNGRWAKQRGKERTYGHQAGAETVHKIIEDAARLGVKYLTLY 63
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
FS NW RP E++ L+ L+ +++ +L KNNI+ R+IG+ L ++ L
Sbjct: 64 TFSTENWNRPQEEVAALMNLLVDSIEEE--TLMKNNIRFRIIGDIKKLPAEVQEGLSRCI 121
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ T NTG L +A +YSSR E++ A++ I ++G + + I +L T+ +PD
Sbjct: 122 EHTANNTGTCLVLALSYSSRWEMTEAVRQIATLAKTGEISPEQITDEYITAHLTTNFMPD 181
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL+IRTGGE RLS++LLWQ AYSE F +WPDF +E F A+ +Y R+RRFG S+
Sbjct: 182 PDLLIRTGGEIRLSNYLLWQCAYSELYFCDTFWPDFDKEEFCKAIYEYQQRERRFGKTSE 241
Query: 242 K 242
+
Sbjct: 242 Q 242
>gi|21911227|ref|NP_665495.1| undecaprenyl pyrophosphate synthase [Streptococcus pyogenes
MGAS315]
gi|28896605|ref|NP_802955.1| undecaprenyl pyrophosphate synthase [Streptococcus pyogenes SSI-1]
gi|42559991|sp|Q8K5S5|UPPS_STRP3 RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|21905440|gb|AAM80298.1| putative undecaprenyl pyrophosphate synthetase [Streptococcus
pyogenes MGAS315]
gi|28811859|dbj|BAC64788.1| putative undecaprenyl pyrophosphate synthetase [Streptococcus
pyogenes SSI-1]
Length = 249
Score = 303 bits (776), Expect = 1e-80, Method: Composition-based stats.
Identities = 111/236 (47%), Positives = 143/236 (60%), Gaps = 4/236 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
P HIGIIMDGNGRWA R PR GH+ G++ E+ A+E+G+K LT++AFS N
Sbjct: 14 GGIPKHIGIIMDGNGRWAKKRLKPRVFGHKAGMDALQEVTITASELGVKVLTVYAFSTEN 73
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP E+S ++ L +F K L +NN+K+++IG L +D L L A D+T+ N
Sbjct: 74 WSRPQDEVSFIMNLPVTFFDKYVPVLHENNVKIQMIGETSRLPEDTLAALNAAIDKTKRN 133
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPD 183
TGL L A NY R EI+ A++ I QD+ + D+ LIA YL T +P DPD
Sbjct: 134 TGLILNFALNYGGRAEITSAVRFIAQDVLDAKLNPGDITEDLIANYLMTDHLPYLYRDPD 193
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
LIIRT GE RLS+FL WQ AYSEF F P WPDF + A+ YN R RRFG +
Sbjct: 194 LIIRTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKAELLKAIADYNHRQRRFGKV 249
>gi|167463765|ref|ZP_02328854.1| di-trans,poly-cis-decaprenylcistransferase [Paenibacillus larvae
subsp. larvae BRL-230010]
gi|322382356|ref|ZP_08056263.1| undecaprenyl pyrophosphate synthase-like protein [Paenibacillus
larvae subsp. larvae B-3650]
gi|321153709|gb|EFX46084.1| undecaprenyl pyrophosphate synthase-like protein [Paenibacillus
larvae subsp. larvae B-3650]
Length = 258
Score = 303 bits (776), Expect = 1e-80, Method: Composition-based stats.
Identities = 99/238 (41%), Positives = 148/238 (62%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+S+ + P H+ IIMDGNGRWA RGLPR AGH G++ +I AA ++G++ LT++
Sbjct: 21 ASSLDLENVPKHVAIIMDGNGRWARQRGLPRVAGHHSGMKNVKKITMAANDIGVQVLTMY 80
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E+ L+KL + F L +NN++V + G L D L ++ A
Sbjct: 81 AFSTENWKRPKEEVEFLMKLPQEFFPLEIDELIENNVRVHMTGWCEGLPDHTLKAVEGAI 140
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T+ NTGL L A NY R E+ + + +D++SG + +D + Y+ T+ +PD
Sbjct: 141 ERTKHNTGLILNFALNYGGRKELLSGVHEVVRDVKSGKLDLSQLDEETFSGYMLTAGLPD 200
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDL+IRT GE RLS+FLLWQ+AY+E F YWP+F+ F+ A+ +Y R RR+G +
Sbjct: 201 PDLLIRTSGELRLSNFLLWQLAYTELWFTDAYWPEFTESHFYQAIAEYQRRARRYGAV 258
>gi|47096940|ref|ZP_00234517.1| undecaprenyl diphosphate synthase [Listeria monocytogenes str. 1/2a
F6854]
gi|254898520|ref|ZP_05258444.1| di-trans,poly-cis-decaprenylcistransferase [Listeria monocytogenes
J0161]
gi|254911989|ref|ZP_05262001.1| undecaprenyl pyrophosphate synthetase [Listeria monocytogenes
J2818]
gi|254936316|ref|ZP_05268013.1| undecaprenyl diphosphate synthase [Listeria monocytogenes F6900]
gi|47014700|gb|EAL05656.1| undecaprenyl diphosphate synthase [Listeria monocytogenes str. 1/2a
F6854]
gi|258608906|gb|EEW21514.1| undecaprenyl diphosphate synthase [Listeria monocytogenes F6900]
gi|293589953|gb|EFF98287.1| undecaprenyl pyrophosphate synthetase [Listeria monocytogenes
J2818]
Length = 252
Score = 303 bits (776), Expect = 1e-80, Method: Composition-based stats.
Identities = 101/231 (43%), Positives = 141/231 (61%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ IIMDGNGRWA R LPR AGH++G++V + A +GI LT++AFS NW
Sbjct: 22 PIPRHVAIIMDGNGRWAKKRFLPRIAGHKEGMDVVKRVTRYANAIGIDVLTLYAFSTENW 81
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP E+ L+KL F L + N++V V+G R +L D + +++A T T
Sbjct: 82 KRPTDEVDFLMKLPVEFFDSFVPELIEENVRVNVMGYRENLPDHTMRAVEKAIADTAHCT 141
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL L A NY R EI A K +++E + ++ ++ +L +S + DPDL+IRT
Sbjct: 142 GLTLNFALNYGGRSEIITAAKEAMKELEHEGKSAENLTEEMLNDHLMSSGLGDPDLLIRT 201
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE RLS+F+LWQ+AYSEF F +WPDFS+E F A+ +Y R RRFGGL
Sbjct: 202 SGELRLSNFMLWQLAYSEFYFTDTHWPDFSKEDFLQAIIEYQNRSRRFGGL 252
>gi|89098607|ref|ZP_01171489.1| UppS [Bacillus sp. NRRL B-14911]
gi|89086569|gb|EAR65688.1| UppS [Bacillus sp. NRRL B-14911]
Length = 258
Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats.
Identities = 101/238 (42%), Positives = 145/238 (60%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + P H+ IIMDGNGRWA R LPR AGH +G++V A E+GIK LT++
Sbjct: 21 IIKIREQKVPSHVAIIMDGNGRWAKKRALPRIAGHHEGMKVVRRTTKLANELGIKTLTLY 80
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E+ L+KL + FL L + N++V++IG + L L +++A
Sbjct: 81 AFSTENWKRPKLEVDYLMKLPEEFLGTFLPELVEENVRVQMIGYKDKLPGHTLRAIEKAM 140
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T+ N GL L A NY SR EI A+K + D +SG + +++ + + YL T + D
Sbjct: 141 EETKDNDGLILNFALNYGSRAEILEAVKRVLNDCQSGIMEESELNEEVFSAYLMTEGLED 200
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDL+IRT GE RLS+F+LWQ+AY+EF F WPDF+ A+ + R RRFGG+
Sbjct: 201 PDLLIRTSGEIRLSNFMLWQLAYTEFWFTDVLWPDFTEGELLEAIEVFQNRQRRFGGV 258
>gi|19746875|ref|NP_608011.1| undecaprenyl pyrophosphate synthase [Streptococcus pyogenes
MGAS8232]
gi|50915030|ref|YP_061002.1| undecaprenyl pyrophosphate synthase [Streptococcus pyogenes
MGAS10394]
gi|306826596|ref|ZP_07459902.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus pyogenes
ATCC 10782]
gi|42559994|sp|Q8NZB2|UPPS_STRP8 RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|73920280|sp|Q5X9U4|UPPS_STRP6 RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|19749117|gb|AAL98510.1| putative undecaprenyl pyrophosphate synthetase [Streptococcus
pyogenes MGAS8232]
gi|50904104|gb|AAT87819.1| Undecaprenyl pyrophosphate synthetase [Streptococcus pyogenes
MGAS10394]
gi|304431204|gb|EFM34207.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus pyogenes
ATCC 10782]
Length = 249
Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats.
Identities = 112/236 (47%), Positives = 144/236 (61%), Gaps = 4/236 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P HIGIIMDGNGRWA R PR GH+ G++ E+ A+E+G+K LT++AFS N
Sbjct: 14 GSIPKHIGIIMDGNGRWAKKRLKPRVFGHKAGMDALQEVTITASELGVKVLTVYAFSTEN 73
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP E+S ++ L +F K L +NN+K+++IG L +D L L A D+T+ N
Sbjct: 74 WSRPQDEVSFIMNLPVAFFDKYVPVLHENNVKIQMIGETSRLPEDTLAALNAAIDKTKRN 133
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPD 183
TGL L A NY R EI+ A++ I QD+ + D+ LIA YL T +P DPD
Sbjct: 134 TGLILNFALNYGGRAEITSAVRFIAQDVLDAKLNPGDITEDLIANYLMTDHLPYLYRDPD 193
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
LIIRT GE RLS+FL WQ AYSEF F P WPDF + A+ YN R RRFG +
Sbjct: 194 LIIRTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKAELLKAIADYNRRQRRFGKV 249
>gi|315282162|ref|ZP_07870630.1| di-trans,poly-cis-decaprenylcistransferase [Listeria marthii FSL
S4-120]
gi|313614194|gb|EFR87870.1| di-trans,poly-cis-decaprenylcistransferase [Listeria marthii FSL
S4-120]
Length = 253
Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats.
Identities = 103/231 (44%), Positives = 140/231 (60%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ IIMDGNGRWA R LPR AGH++G++V + A +GI LT++AFS NW
Sbjct: 23 PIPRHVAIIMDGNGRWAKKRFLPRIAGHKEGMDVVKRVTRYANAIGIDVLTLYAFSTENW 82
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP E+ L+KL F L + N++V V+G R +L D + +++A T T
Sbjct: 83 KRPTDEVDFLMKLPVEFFDSFVPELIEENVRVNVMGYRENLPDHTMRAVEKAIADTAHCT 142
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL L A NY R EI A K +++ S D+ L+ +L +S + DPDL+IRT
Sbjct: 143 GLTLNFALNYGGRSEIITAAKEAMKELAREGKSSEDLTEELLNDHLMSSGLGDPDLLIRT 202
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE RLS+F+LWQ+AYSEF F +WPDFS+E F A+ +Y R RRFGGL
Sbjct: 203 SGELRLSNFMLWQLAYSEFYFTETHWPDFSKEDFLQAIIEYQNRSRRFGGL 253
>gi|327460712|gb|EGF07047.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sanguinis
SK1]
Length = 249
Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats.
Identities = 105/235 (44%), Positives = 145/235 (61%), Gaps = 4/235 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P HI +IMDGNGRWA R PR GH+ G+E ++ AA E+G++ LT++AFS NW
Sbjct: 15 NVPKHIAVIMDGNGRWAKKRMQPRVFGHKAGMETLQKVTIAAKEMGVQVLTVYAFSTENW 74
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+S ++ L F + L KNN+K+++IG+ L L++AE T+LNT
Sbjct: 75 SRPEKEVSFIMNLPVEFYDRYVPELHKNNVKIQMIGDTAKLPKATFEALEKAESLTKLNT 134
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDL 184
GL L A NY R EI++A+K I QD+ + D+ +I YL TS++P DPDL
Sbjct: 135 GLILNFALNYGGRYEINQAVKEIAQDVLDAKLSPGDITEEVIGNYLYTSNLPKMLRDPDL 194
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE RLS+FL WQ AYSE F WPDF + A+ +Y+ R+RRFGG+
Sbjct: 195 VIRTSGELRLSNFLPWQSAYSELYFTDVLWPDFDEKALKAAIAEYSRRNRRFGGV 249
>gi|254519195|ref|ZP_05131251.1| undecaprenyl pyrophosphate synthetase [Clostridium sp. 7_2_43FAA]
gi|226912944|gb|EEH98145.1| undecaprenyl pyrophosphate synthetase [Clostridium sp. 7_2_43FAA]
Length = 253
Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats.
Identities = 106/235 (45%), Positives = 150/235 (63%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IIMDGNGRWA R LPR GH+ G+E ++ A +GIK LT++AFS
Sbjct: 19 LDKENIPKHIAIIMDGNGRWAKQRKLPRTMGHKAGVETIRRVIKEAHILGIKYLTLYAFS 78
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+S L+KL+ +L+ L +N + ++V+G+ L D + EA + T
Sbjct: 79 TENWKRPDDEVSALMKLLVEYLRSELAELNRNGVVIKVLGDINKLPIDAQKEVNEAINIT 138
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ N G+ L IAFNY RDEI RA+K + +D + G++ +D++ + KYL T++ PDPDL
Sbjct: 139 KDNKGIVLNIAFNYGGRDEIIRAVKMVSEDAKKGNININDINEEIFEKYLYTNNTPDPDL 198
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IIR GE+R+S+FLLWQ AYSEF + WPDF E A+ Y RDRR+GG+
Sbjct: 199 IIRPSGEQRISNFLLWQCAYSEFWYSNVCWPDFKEEHLHKAIYDYQHRDRRYGGV 253
>gi|126659263|ref|ZP_01730400.1| hypothetical protein CY0110_30628 [Cyanothece sp. CCY0110]
gi|126619462|gb|EAZ90194.1| hypothetical protein CY0110_30628 [Cyanothece sp. CCY0110]
Length = 253
Score = 303 bits (775), Expect = 2e-80, Method: Composition-based stats.
Identities = 91/241 (37%), Positives = 139/241 (57%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + P HI +IMDGNGRWA RGLPR GH++G++ +++ + GI LT
Sbjct: 12 LPIDLDKTRLPQHIAVIMDGNGRWAKRRGLPRIMGHQRGVDTLKDLLRCCRDWGIPALTA 71
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP+ E+ L+ L + L++ + N+++R +G L + + +
Sbjct: 72 YAFSTENWGRPLEEVEFLMTLFERVLRRELQEMMAENVRIRFVGALDVLPPSLQLEISRS 131
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ T NTG+ +A NY R EI ++ + I Q ++ G + D++ +L +L T +P
Sbjct: 132 MEDTENNTGVQFTVATNYGGRQEIVQSCRAIAQQVKQGLLNLDDINENLFENFLYTKGIP 191
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GE RLS+FLLWQ+AY+E WPDF R + AL Y R+RRFG +
Sbjct: 192 DPDLLIRTSGEMRLSNFLLWQLAYAEIYVTQTLWPDFDRHILHDALLSYQQRERRFGKVG 251
Query: 241 K 241
K
Sbjct: 252 K 252
>gi|229098292|ref|ZP_04229239.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus Rock3-29]
gi|229104385|ref|ZP_04235054.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus Rock3-28]
gi|229117309|ref|ZP_04246687.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus Rock1-3]
gi|228666209|gb|EEL21673.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus Rock1-3]
gi|228679083|gb|EEL33291.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus Rock3-28]
gi|228685190|gb|EEL39121.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus Rock3-29]
Length = 235
Score = 303 bits (775), Expect = 2e-80, Method: Composition-based stats.
Identities = 104/235 (44%), Positives = 152/235 (64%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M P+HI IIMDGNGRWA R +PR AGH +G++V +I A+++ +K LT++AFS
Sbjct: 1 MKKGYIPEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLNVKVLTLYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+ L++L + FL L + N++VRVIG + L +++A + T
Sbjct: 61 TENWKRPKKEVDYLMRLPEEFLGTFLPELIEENVQVRVIGQKDRLPTHTRRAMEKAMEDT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NTGL L A NY SRDEI A++++ +D E G + + ++ +I+ YL T +PDP+L
Sbjct: 121 QENTGLILNFALNYGSRDEIVSAVQHMMKDSEEGKIRAEEISEEMISSYLMTGSLPDPEL 180
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE R+S+F+LWQ+AYSEF F YWPDF+ E A+ + R RRFGG+
Sbjct: 181 LIRTSGELRISNFMLWQIAYSEFWFTDVYWPDFTEEHLLSAITDFQHRGRRFGGV 235
>gi|150010269|ref|YP_001305012.1| undecaprenyl pyrophosphate synthetase [Parabacteroides distasonis
ATCC 8503]
gi|256839103|ref|ZP_05544613.1| di-trans,poly-cis-decaprenylcistransferase [Parabacteroides sp.
D13]
gi|298374648|ref|ZP_06984606.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides sp. 3_1_19]
gi|301308356|ref|ZP_07214310.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides sp. 20_3]
gi|149938693|gb|ABR45390.1| undecaprenyl pyrophosphate synthetase [Parabacteroides distasonis
ATCC 8503]
gi|256740022|gb|EEU53346.1| di-trans,poly-cis-decaprenylcistransferase [Parabacteroides sp.
D13]
gi|298269016|gb|EFI10671.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides sp. 3_1_19]
gi|300833826|gb|EFK64442.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides sp. 20_3]
Length = 247
Score = 303 bits (775), Expect = 2e-80, Method: Composition-based stats.
Identities = 97/242 (40%), Positives = 154/242 (63%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + + P H+ IIMDGNGRWA A+G R GH++G+ +I+ A ++G+K LT+
Sbjct: 3 LIEKIDKNRLPRHVAIIMDGNGRWAKAKGKDRSFGHQEGVVSVRKIMDAVTQLGLKYLTL 62
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW RP E+ L+ L+ S + + + K N+++ IG+ L +D L+E
Sbjct: 63 YTFSTENWNRPEEEVQALMSLLVSAIHRETPDMMKKNVRLTAIGDLSRLREDAYNTLQEC 122
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
D T NTG L +A +YSSR EI+RA + + Q++ + +D+ ++++ +L T ++P
Sbjct: 123 IDTTSANTGTTLVLALSYSSRWEITRAARQLAQEVLEQKINPNDITEAMVSDHLTTKNIP 182
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRTGGEKR+S+FLLWQ++Y+EF F +WPDF E + A+ Y R+RRFG S
Sbjct: 183 DPDLLIRTGGEKRISNFLLWQLSYAEFFFTDVFWPDFREEELYEAILYYQQRERRFGKTS 242
Query: 241 KK 242
++
Sbjct: 243 EQ 244
>gi|222529796|ref|YP_002573678.1| undecaprenyl diphosphate synthase [Caldicellulosiruptor bescii DSM
6725]
gi|222456643|gb|ACM60905.1| undecaprenyl diphosphate synthase [Caldicellulosiruptor bescii DSM
6725]
Length = 248
Score = 303 bits (775), Expect = 2e-80, Method: Composition-based stats.
Identities = 114/238 (47%), Positives = 152/238 (63%), Gaps = 1/238 (0%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P HI IIMDGNGRWA RGLPR AGHR G + EIV A E+G+K LT++AF
Sbjct: 11 KIEKEKMPQHIAIIMDGNGRWAKKRGLPRSAGHRFGAQKLKEIVLFADEIGLKYLTVYAF 70
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSL-KKNNIKVRVIGNRLSLDDDILCVLKEAED 122
S NW+RP E+ L+ L++ F +L K I++RVIG+ LD DI + AE+
Sbjct: 71 STENWKRPKEEVENLMNLLREFFDTEIENLIHKTQIRIRVIGDISKLDKDIQERIVSAEE 130
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
+T+ GL + IA NY +R EI A+KN+ DI+SG + DVD L KYL T+++PDP
Sbjct: 131 RTKDKRGLCVVIALNYGARQEIINAVKNLALDIKSGKIDIEDVDEDLFKKYLYTNEIPDP 190
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IR GE R+S+FLLWQ++Y+EF F WPDF +E A+ Y R+RRFGG+
Sbjct: 191 DLLIRPSGEMRVSNFLLWQISYTEFWFSNVLWPDFKKEHLLKAIEDYQKRERRFGGVK 248
>gi|315633609|ref|ZP_07888899.1| undecaprenyl diphosphate synthase [Aggregatibacter segnis ATCC
33393]
gi|315477651|gb|EFU68393.1| undecaprenyl diphosphate synthase [Aggregatibacter segnis ATCC
33393]
Length = 239
Score = 303 bits (775), Expect = 2e-80, Method: Composition-based stats.
Identities = 94/239 (39%), Positives = 140/239 (58%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + ++ P H+ IIMDGNGRWA +G R GH+ G+ E V+ A ++G+K LT++
Sbjct: 1 MTELDRNNIPQHVAIIMDGNGRWAKQQGKMRVFGHKNGVAAVREAVSYARKIGVKYLTLY 60
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+S L+ L L L KN+I+++++G+ + +K+AE
Sbjct: 61 AFSSENWNRPEQEVSALMSLFMQALDFEVKKLHKNDIRLKILGDISRFSAGLQEKIKKAE 120
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T NT L L IA NY R +I +A + + + + + + D++ L+ +YL T D P+
Sbjct: 121 KLTENNTALRLNIAANYGGRWDIVQAAQQLAEQVRAQQITVADINEDLLQQYLVTKDEPE 180
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRT GE+R+S+FLLWQ AY+E F WPDF+ F A+ Y R RRFGG
Sbjct: 181 VDLLIRTSGEQRISNFLLWQTAYAELYFSDVLWPDFNEAEFHQAILSYQQRHRRFGGTE 239
>gi|282900561|ref|ZP_06308503.1| Di-trans-poly-cis-decaprenylcistransferase [Cylindrospermopsis
raciborskii CS-505]
gi|281194361|gb|EFA69316.1| Di-trans-poly-cis-decaprenylcistransferase [Cylindrospermopsis
raciborskii CS-505]
Length = 249
Score = 303 bits (775), Expect = 2e-80, Method: Composition-based stats.
Identities = 90/239 (37%), Positives = 138/239 (57%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P H+ +IMDGNGRWA +GLPR GH++G++ ++ + GI+ LT
Sbjct: 11 LPPDLKPELLPKHVAVIMDGNGRWAKGQGLPRIMGHKQGVDALKNLLRCCKDWGIQALTA 70
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP E+ L+ L + L++ + + N++++ +GN +L + + +
Sbjct: 71 YAFSTENWNRPHEEVEFLMTLFQGVLRQELREMVEENVEIQFVGNLQALPVALQREISHS 130
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
QTR N + +A NY R EI +A + I Q ++ G + ++ L A +L T+ +
Sbjct: 131 MAQTRGNQSIKFTVATNYGGRQEIVQACQAIAQKVKEGLLNPEEISEELFAGHLYTAGIT 190
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRT GE RLS+FLLWQ+AY+E WPDF R F AL Y R+RRFGG+
Sbjct: 191 DPDLLIRTSGEMRLSNFLLWQMAYAEIYITDTLWPDFDRNQFHQALRAYQQRERRFGGV 249
>gi|139474451|ref|YP_001129167.1| undecaprenyl pyrophosphate synthase [Streptococcus pyogenes str.
Manfredo]
gi|134272698|emb|CAM30969.1| undecaprenyl pyrophosphate synthetase [Streptococcus pyogenes str.
Manfredo]
Length = 249
Score = 303 bits (775), Expect = 2e-80, Method: Composition-based stats.
Identities = 112/236 (47%), Positives = 144/236 (61%), Gaps = 4/236 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P HIGIIMDGNGRWA R PR GH+ G++ E+ A+E+G+K LT++AFS N
Sbjct: 14 GSIPKHIGIIMDGNGRWAKKRLKPRVFGHKAGMDALQEVTITASELGVKVLTVYAFSTEN 73
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP E+S ++ L +F K L +NN+K+++IG L +D L L A D+T+ N
Sbjct: 74 WSRPQDEVSFIMNLPVAFFDKYVPVLHENNVKIQMIGETSRLPEDTLAALNAAIDKTKRN 133
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPD 183
TGL L A NY R EI+ A++ I QD+ + D+ LIA YL T +P DPD
Sbjct: 134 TGLILNFALNYGGRAEITSAVRFIAQDVLDAKLNPGDITEDLIANYLMTDHLPYLYRDPD 193
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
LIIRT GE RLS+FL WQ AYSEF F P WPDF + A+ YN R RRFG +
Sbjct: 194 LIIRTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKAELLKAIADYNRRQRRFGKV 249
>gi|298386831|ref|ZP_06996386.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides sp. 1_1_14]
gi|298260505|gb|EFI03374.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides sp. 1_1_14]
Length = 244
Score = 303 bits (775), Expect = 2e-80, Method: Composition-based stats.
Identities = 100/241 (41%), Positives = 148/241 (61%), Gaps = 2/241 (0%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + + P HI IIMDGNGRWA RG R GH+ G E ++I+ AA +G+K LT++
Sbjct: 4 IEKIDKNRIPQHIAIIMDGNGRWAKQRGKERTYGHQAGAETVHKIIEDAARLGVKYLTLY 63
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
FS NW RP E++ L+ L+ +++ +L KNNI+ R+IG+ L ++ L
Sbjct: 64 TFSTENWNRPQEEVTALMNLLLDSIEEE--TLMKNNIRFRIIGDIKKLPAEVQEGLSRCI 121
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ T NTG L +A +YSSR E++ A++ I ++G + + I +L T+ +PD
Sbjct: 122 EHTANNTGTCLVLALSYSSRWEMTEAVRQIATLAKTGEISPEQITDEYITAHLTTNFMPD 181
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL+IRTGGE RLS++LLWQ AYSE F +WPDF +E F A+ +Y R+RRFG S+
Sbjct: 182 PDLLIRTGGEIRLSNYLLWQCAYSELYFCDTFWPDFDKEEFCKAIYEYQQRERRFGKTSE 241
Query: 242 K 242
+
Sbjct: 242 Q 242
>gi|260583920|ref|ZP_05851668.1| di-trans,poly-cis-decaprenylcistransferase [Granulicatella elegans
ATCC 700633]
gi|260158546|gb|EEW93614.1| di-trans,poly-cis-decaprenylcistransferase [Granulicatella elegans
ATCC 700633]
Length = 265
Score = 303 bits (775), Expect = 2e-80, Method: Composition-based stats.
Identities = 104/238 (43%), Positives = 154/238 (64%), Gaps = 3/238 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ ++ P HI +IMDGNGRWA +R LPR AGH++G+ I AA E+G+K +T++AFS
Sbjct: 27 LDKTNIPQHIAVIMDGNGRWAKSRNLPRIAGHKEGMSTVKRIAIAADELGVKAMTMYAFS 86
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+S L+KL F L++ N+++R+IG L + V+++A + T
Sbjct: 87 TENWKRPTEEVSFLMKLPGDFFSSFMPELQERNMRIRLIGFTDQLPEATRRVVEKAVEDT 146
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS---DVPD 181
+ NTG+ L A NY SR EI +A+K I D+ +G + ++ + A +L T+ D+ +
Sbjct: 147 KDNTGMTLCFALNYGSRAEILQAVKEIAVDVSNGKYDAESINEEVFANHLQTNFLGDLSE 206
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDL+IRT GE+RLS+FLLWQ+AYSE+ F +WPDFS+E A+ Y R RR+GGL
Sbjct: 207 PDLMIRTSGEQRLSNFLLWQLAYSEYYFTDIFWPDFSKEDLEEAILTYQKRQRRYGGL 264
>gi|225181374|ref|ZP_03734818.1| undecaprenyl diphosphate synthase [Dethiobacter alkaliphilus AHT 1]
gi|225167955|gb|EEG76762.1| undecaprenyl diphosphate synthase [Dethiobacter alkaliphilus AHT 1]
Length = 254
Score = 303 bits (775), Expect = 2e-80, Method: Composition-based stats.
Identities = 106/233 (45%), Positives = 142/233 (60%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+ P H+ IIMDGNGRWA+ RGLPR AGH G+ + +A E+GIK LT++AFS N
Sbjct: 21 GAIPQHVAIIMDGNGRWASHRGLPRTAGHHAGMVALRRTIRSADELGIKVLTVYAFSTEN 80
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP E+ L++L K FL+ L + N+KV ++G+ L + EA T N
Sbjct: 81 WSRPKREVDFLMRLPKEFLRTDLPELIEKNVKVVMVGSADGLPRHTREAVDEAMAATAQN 140
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
TG+ L A NY SR EI A+++I + SG + D+D + +L T+D+PDPDL+IR
Sbjct: 141 TGMILNFALNYGSRAEIIHAVRDIAEKSASGLISPGDIDEETVDNHLYTADLPDPDLLIR 200
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
GE RLS+FLLWQ+AY+E F YWPDF R A+ Y RDRRFGG+
Sbjct: 201 PSGEIRLSNFLLWQLAYAELWFTDVYWPDFDRGHLLEAIEAYQNRDRRFGGIK 253
>gi|113461126|ref|YP_719194.1| undecaprenyl pyrophosphate synthetase [Haemophilus somnus 129PT]
gi|170717709|ref|YP_001784781.1| undecaprenyl diphosphate synthase [Haemophilus somnus 2336]
gi|112823169|gb|ABI25258.1| Undecaprenyl pyrophosphate synthetase [Haemophilus somnus 129PT]
gi|168825838|gb|ACA31209.1| undecaprenyl diphosphate synthase [Haemophilus somnus 2336]
Length = 241
Score = 303 bits (775), Expect = 2e-80, Method: Composition-based stats.
Identities = 96/234 (41%), Positives = 139/234 (59%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ ++ P H+ IIMDGNGRWA +G R GH+ GI+ E V+ A ++GIK LT++AF
Sbjct: 5 ALNLNNIPQHVAIIMDGNGRWAKQQGKMRIWGHKNGIKAVRESVSYARKIGIKVLTLYAF 64
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP SE+S L+ L L L KNNIK+++IG+ ++ + +K AE
Sbjct: 65 SSENWSRPESEVSALMSLFMQTLDIEVKKLHKNNIKLQIIGDVSQFNERLQEKIKRAEKL 124
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NT L L IA NY +I +A + Q ++ + ++D + +L T P D
Sbjct: 125 TENNTALTLNIAANYGGCWDIVQATCQLVQLVKENKLHIDEIDEQIFQHHLTTGSQPPVD 184
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
L+IRT GE+R+S+FLLWQ+AY+E F WPDF+ + F A+ Y R+RRFG
Sbjct: 185 LLIRTSGEQRISNFLLWQIAYAELYFTDTLWPDFNEQEFNQAILAYQQRERRFG 238
>gi|296132873|ref|YP_003640120.1| undecaprenyl diphosphate synthase [Thermincola sp. JR]
gi|296031451|gb|ADG82219.1| undecaprenyl diphosphate synthase [Thermincola potens JR]
Length = 259
Score = 303 bits (775), Expect = 2e-80, Method: Composition-based stats.
Identities = 106/239 (44%), Positives = 147/239 (61%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++A++ + P HI IIMDGNGRWAA RGLPR AGHR G+E +IV + +GIK LT+
Sbjct: 21 LLAAIDMNKLPMHIAIIMDGNGRWAARRGLPRAAGHRAGVESLRDIVKTCSSLGIKYLTV 80
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E++ L+ L+ +L K L +NN+KVR IG L L +A
Sbjct: 81 YAFSTENWKRPQEEVNILMDLLVEYLGKEMRELHQNNVKVRAIGRIEELPASAQKALSDA 140
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ T NTGL L +A NY R EI A++ I ++ G + +D ++ ++L T +P
Sbjct: 141 FELTGNNTGLTLTLALNYGGRLEIVEAVQKIAGEVLKGRLDLKAIDEKVVNEHLYTVGMP 200
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IR GE R+S+FLLWQ+AYSE + P WP F + A+ + R RRFGGL
Sbjct: 201 DPDLVIRPSGELRISNFLLWQMAYSELWYSPVLWPSFRKVHLLQAIIDFQKRQRRFGGL 259
>gi|311030096|ref|ZP_07708186.1| undecaprenyl pyrophosphate synthase [Bacillus sp. m3-13]
Length = 257
Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats.
Identities = 105/239 (43%), Positives = 156/239 (65%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ +M+ P+HI IIMDGNGRWA R +PR AGH +G++ +I AA +G+K LT+
Sbjct: 19 LKEEIMNHPIPEHIAIIMDGNGRWAKKRAMPRIAGHHEGMKTVRKITKAANSLGVKVLTM 78
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E+ L+KL + FL L + N++VR++GN+ L + L + A
Sbjct: 79 YAFSTENWKRPKLEVDFLMKLPEEFLGTFLPELMEENVQVRLMGNKSDLPEHTLRAVNNA 138
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
++T+ NTGL L A NY RDEI RA+KN+ DI+ ++ + + + ++YL ++ +P
Sbjct: 139 MEKTKDNTGLILNFALNYGGRDEILRAVKNVAADIKDNALTTDQLTEEMFSEYLFSNLLP 198
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRT GE RLS+F+LWQ+AY+EF F WPDF + A+N + +R RRFGG+
Sbjct: 199 DPDLLIRTSGEIRLSNFMLWQLAYAEFYFTDVLWPDFEENDLYEAINSFQMRGRRFGGI 257
>gi|327441020|dbj|BAK17385.1| undecaprenyl pyrophosphate synthase [Solibacillus silvestris
StLB046]
Length = 264
Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats.
Identities = 104/239 (43%), Positives = 153/239 (64%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P HI IIMDGNGRWA R LPR AGH +G++ +I A ++G++ LT++AFS
Sbjct: 24 VKGEEIPTHIAIIMDGNGRWAKKRSLPRVAGHHEGMKTIRKITRCACDLGVQVLTLYAFS 83
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP SE+ L++L + FL L + NIKV +IG SL D LK+A + T
Sbjct: 84 TENWKRPKSEVEFLMRLPEQFLNSFLPELMERNIKVEMIGVMDSLPDYTQSALKKAMEAT 143
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NTGL L A NY R EI A++ + +++E+GS+ +++ I++Y+ T+ +P+PDL
Sbjct: 144 AGNTGLVLNFAMNYGGRAEIVMAMQQLLKEVEAGSLTIDELNEQHISQYVMTAHLPEPDL 203
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
+IRT GE R+S+F+LWQ+AY+EF F +WPDF A++ Y R+RR+GGL +G
Sbjct: 204 LIRTSGEVRISNFMLWQLAYTEFWFTDTHWPDFDEACLKEAISVYQNRNRRYGGLKGEG 262
>gi|290893572|ref|ZP_06556555.1| undecaprenyl diphosphate synthase [Listeria monocytogenes FSL
J2-071]
gi|290556917|gb|EFD90448.1| undecaprenyl diphosphate synthase [Listeria monocytogenes FSL
J2-071]
gi|313608997|gb|EFR84737.1| di-trans,poly-cis-decaprenylcistransferase [Listeria monocytogenes
FSL F2-208]
Length = 252
Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats.
Identities = 101/231 (43%), Positives = 141/231 (61%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ IIMDGNGRWA R LPR AGH++G++V + A +GI LT++AFS NW
Sbjct: 22 PIPRHVAIIMDGNGRWAKKRFLPRIAGHKEGMDVVKRVTRYANAMGIDVLTLYAFSTENW 81
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP E+ L+KL F L + N++V V+G R +L D + +++A T T
Sbjct: 82 KRPTDEVDFLMKLPVEFFDSFVPELIEENVRVNVMGYRENLPDHTMRAVEKAIADTAHCT 141
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL L A NY R EI A K +++E + ++ ++ +L +S + DPDL+IRT
Sbjct: 142 GLTLNFALNYGGRSEIITAAKEAMKELEREGKSAENLTEEMLNDHLMSSGLGDPDLLIRT 201
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE RLS+F+LWQ+AYSEF F +WPDFS+E F A+ +Y R RRFGGL
Sbjct: 202 SGELRLSNFMLWQLAYSEFYFTDTHWPDFSKEDFLQAIIEYQNRSRRFGGL 252
>gi|187778976|ref|ZP_02995449.1| hypothetical protein CLOSPO_02571 [Clostridium sporogenes ATCC
15579]
gi|187772601|gb|EDU36403.1| hypothetical protein CLOSPO_02571 [Clostridium sporogenes ATCC
15579]
Length = 252
Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats.
Identities = 110/238 (46%), Positives = 154/238 (64%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
++ ++ P HI IIMDGNGRWA R LPR GH+ G+E EIV ++G+K LT++A
Sbjct: 15 MNLDMNNIPKHIAIIMDGNGRWAKERSLPRTMGHKAGVETIREIVKECDKLGVKYLTLYA 74
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW+RP E+S L+ L+ +L+K L +NN+ V IG+ L + + L++A +
Sbjct: 75 FSTENWKRPKDEVSALMTLLVQYLRKEVKELNENNVIVNAIGDMEKLPEMCIKELEKAYE 134
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
+T+ NTGL L +A NY RDEI RA+K I++DI +G + +++ LI+ YL T + DP
Sbjct: 135 ETKNNTGLVLNLALNYGGRDEIIRAVKYIYEDITAGKIKEEEINEELISNYLYTKGMADP 194
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DLIIR GEKR+S+FLLWQ AYSEF + WPDF +E A+ Y RDRRFG +
Sbjct: 195 DLIIRPSGEKRISNFLLWQCAYSEFWYSDIKWPDFKKEHLHKAIYDYQNRDRRFGSVK 252
>gi|332706087|ref|ZP_08426159.1| undecaprenyl pyrophosphate synthetase [Lyngbya majuscula 3L]
gi|332355179|gb|EGJ34647.1| undecaprenyl pyrophosphate synthetase [Lyngbya majuscula 3L]
Length = 246
Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats.
Identities = 94/239 (39%), Positives = 146/239 (61%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + P H+ +IMDGNGRWA RGLPR GHR+G+E +++ + GIK LT
Sbjct: 8 LPSDLSPDRLPRHVAVIMDGNGRWAKRRGLPRVIGHRQGVEALKKLLRCCDDWGIKALTA 67
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP+ E+ L+ L + L + + + N++++ +GN +L + ++ +
Sbjct: 68 YAFSTENWGRPLEEVEFLMTLFERVLARELQEMMEENVRIQFVGNLTALPQSLQAQIEHS 127
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
++T NTG+ +A NY +R EI +A + I ++ G + D+D +L +++L T++V
Sbjct: 128 MNETLNNTGIQFTVATNYGARQEIIQACRAIATQVQLGHIQPDDIDEALFSRHLYTANVC 187
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRT GE RLS+FLLWQ+AY E WPDF R F AL+ Y R+RRFG +
Sbjct: 188 DPDLLIRTSGEMRLSNFLLWQMAYGELYITDTLWPDFDRGQFHRALSTYQQRERRFGKV 246
>gi|153808973|ref|ZP_01961641.1| hypothetical protein BACCAC_03274 [Bacteroides caccae ATCC 43185]
gi|149128306|gb|EDM19525.1| hypothetical protein BACCAC_03274 [Bacteroides caccae ATCC 43185]
Length = 244
Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats.
Identities = 101/241 (41%), Positives = 148/241 (61%), Gaps = 2/241 (0%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + + P H+ IIMDGNGRWA RG R GH G E +I AA +GIK LT++
Sbjct: 4 IEQIDKTRIPQHVAIIMDGNGRWAKQRGKERTYGHHAGAETVQKITEDAARLGIKYLTLY 63
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
FS NW RP E+S L+ L+ +++ +L KNN++ +VIG+ + L D+ LK
Sbjct: 64 TFSTENWNRPQKEVSALMNLLLDSIEEE--TLMKNNLRFQVIGDFMKLPADVQASLKACI 121
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ T NTG+ L +A +YSSR EI+ A + I +++G + + I+ +L T+ +PD
Sbjct: 122 EHTVHNTGMCLVLALSYSSRWEITEAARQIAAQVKAGEISPEQITDEYISSHLSTNFMPD 181
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL+IRTGGE RLS+++LWQ AYSE F +WPDF E + A+ +Y R+RRFG S+
Sbjct: 182 PDLLIRTGGEIRLSNYMLWQCAYSELYFCDTFWPDFDNEELYKAICEYQQRERRFGKTSE 241
Query: 242 K 242
+
Sbjct: 242 Q 242
>gi|325104677|ref|YP_004274331.1| undecaprenyl diphosphate synthase [Pedobacter saltans DSM 12145]
gi|324973525|gb|ADY52509.1| undecaprenyl diphosphate synthase [Pedobacter saltans DSM 12145]
Length = 246
Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats.
Identities = 102/239 (42%), Positives = 158/239 (66%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ +S P HI +IMDGNGRWA +G R GH+ G+ + V AAE+G++NLT++AF
Sbjct: 6 RIDTSRLPKHIAVIMDGNGRWAKEQGKLRVFGHKNGVIAVRDTVEGAAEIGVENLTLYAF 65
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP E++ L++L+ S + K +LKKNN+++ IG+ +L LK+A ++
Sbjct: 66 STENWNRPKLEVTALMELLVSTIAKETETLKKNNVRLNAIGDLAALPKRCYKELKDAMEK 125
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NT L L +A +YSSR EI+ A KN+ D+++G + ++ + + YL T+++PDP+
Sbjct: 126 TSGNTRLTLTLALSYSSRWEITEAAKNLAADVKAGKIDLGSINEQVFSGYLSTANLPDPE 185
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRT GE R+S++LLWQ+AY+E F P+ WPDF +E F A+ + R+RRFG S++
Sbjct: 186 LMIRTSGELRMSNYLLWQLAYAELYFTPKLWPDFRKEDLFEAIVDFQQRERRFGLTSEQ 244
>gi|28210951|ref|NP_781895.1| undecaprenyl pyrophosphate synthase [Clostridium tetani E88]
gi|42559806|sp|Q895K8|UPPS_CLOTE RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|28203390|gb|AAO35832.1| undecaprenyl pyrophosphate synthetase [Clostridium tetani E88]
Length = 255
Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats.
Identities = 107/236 (45%), Positives = 149/236 (63%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P HI IIMDGNGRWA R LPR GH+ G+E +IV +G++ LT++AF
Sbjct: 20 QLDLDNIPKHIAIIMDGNGRWAKERKLPRSLGHKAGVETIRDIVKECNNIGVRYLTLYAF 79
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP EI+ L++L+ ++L+K L +NN+ V IG+ L L +A ++
Sbjct: 80 STENWKRPKEEINALMELLVNYLRKEVAELHQNNVVVNTIGDVSKLPKACEDELMKAYNK 139
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NTGL L +A NY RDEI RAIK +++DIE + +V+ L+ YL T +PDPD
Sbjct: 140 TKNNTGLVLNLALNYGGRDEIIRAIKLMYKDIEKKGLDIENVNEDLLKNYLYTKGMPDPD 199
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
LIIR GE+R+S+FLLWQ AYSEF + WPDF + A+ Y R+RRFGG+
Sbjct: 200 LIIRPSGEQRISNFLLWQCAYSEFWYSNIKWPDFKKHHLHKAIKDYQNRNRRFGGV 255
>gi|257898232|ref|ZP_05677885.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium Com15]
gi|257836144|gb|EEV61218.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium Com15]
Length = 270
Score = 302 bits (774), Expect = 3e-80, Method: Composition-based stats.
Identities = 105/238 (44%), Positives = 147/238 (61%), Gaps = 4/238 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
P H+ IIMDGNGRWA R LPR AGH++G+E ++ A+ +G+K LT++AFS N
Sbjct: 24 GPIPQHVAIIMDGNGRWAQNRRLPRVAGHKEGMETVKKVTKKASRLGVKVLTLYAFSTEN 83
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W+RP E+S L++L F L K N+KV V+G L + +K A +QT+ N
Sbjct: 84 WKRPKDEVSFLMQLPVDFFDTFVPELIKENVKVHVMGYENVLPEHTQDAVKRAIEQTKDN 143
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPD 183
TG+ L A NY SR EI A++NI +++ G + + ++D +IA +L T +P DP+
Sbjct: 144 TGMVLNFALNYGSRAEIVTAVQNIAEEVAKGEIQAEEIDDEVIANHLMTGFLPKELQDPE 203
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
L+IRT GE+R+S+FLLWQ+AYSE F WPDF A+ Y RDRRFGG+ K
Sbjct: 204 LMIRTSGEERISNFLLWQIAYSELYFTKALWPDFDGAHLEEAIASYQNRDRRFGGVKK 261
>gi|227551762|ref|ZP_03981811.1| undecaprenyl diphosphate synthase [Enterococcus faecium TX1330]
gi|257887077|ref|ZP_05666730.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium
1,141,733]
gi|257895642|ref|ZP_05675295.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium Com12]
gi|293377747|ref|ZP_06623936.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
PC4.1]
gi|227179067|gb|EEI60039.1| undecaprenyl diphosphate synthase [Enterococcus faecium TX1330]
gi|257823131|gb|EEV50063.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium
1,141,733]
gi|257832207|gb|EEV58628.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium Com12]
gi|292643747|gb|EFF61868.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
PC4.1]
Length = 270
Score = 302 bits (774), Expect = 3e-80, Method: Composition-based stats.
Identities = 105/238 (44%), Positives = 147/238 (61%), Gaps = 4/238 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
P H+ IIMDGNGRWA R LPR AGH++G+E ++ A+ +G+K LT++AFS N
Sbjct: 24 GPIPQHVAIIMDGNGRWAQNRRLPRVAGHKEGMETVKKVTKKASRLGVKVLTLYAFSTEN 83
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W+RP E+S L++L F L K N+KV V+G L + +K A +QT+ N
Sbjct: 84 WKRPKDEVSFLMQLPVDFFDTFVPELIKENVKVHVMGYENVLPEQTQDAVKRAIEQTKDN 143
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPD 183
TG+ L A NY SR EI A++NI +++ G + + ++D +IA +L T +P DP+
Sbjct: 144 TGMVLNFALNYGSRAEIVTAVQNIAEEVAKGEIQAEEIDDEVIANHLMTGFLPKELQDPE 203
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
L+IRT GE+R+S+FLLWQ+AYSE F WPDF A+ Y RDRRFGG+ K
Sbjct: 204 LMIRTSGEERISNFLLWQIAYSELYFTKALWPDFDGAHLEEAIASYQNRDRRFGGVKK 261
>gi|257884336|ref|ZP_05663989.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium
1,231,501]
gi|257820174|gb|EEV47322.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium
1,231,501]
Length = 270
Score = 302 bits (774), Expect = 3e-80, Method: Composition-based stats.
Identities = 105/238 (44%), Positives = 147/238 (61%), Gaps = 4/238 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
P H+ IIMDGNGRWA R LPR AGH++G+E ++ A+ +G+K LT++AFS N
Sbjct: 24 GPIPQHVAIIMDGNGRWAQNRRLPRVAGHKEGMETVKKVTKKASRLGVKVLTLYAFSTEN 83
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W+RP E+S L++L F L K N+KV V+G L + ++ A +QT+ N
Sbjct: 84 WKRPKDEVSFLMQLPVDFFDTFVPELIKENVKVHVMGYENVLPEHTQDAVRRAIEQTKNN 143
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPD 183
TG+ L A NY SR EI A++ I +++ G + + ++D LIAK+L T +P DP+
Sbjct: 144 TGMVLNFALNYGSRAEIVTAVQEIAEEVAKGEIHAEEIDDELIAKHLMTGFLPKELQDPE 203
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
L+IRT GE+R+S+FLLWQ+AYSE F WPDF A+ Y RDRRFGG+ K
Sbjct: 204 LMIRTSGEERISNFLLWQIAYSELYFTKALWPDFDGAHLEEAIASYQNRDRRFGGVKK 261
>gi|217964538|ref|YP_002350216.1| di-trans,poly-cis-decaprenylcistransferase [Listeria monocytogenes
HCC23]
gi|217333808|gb|ACK39602.1| di-trans,poly-cis-decaprenylcistransferase [Listeria monocytogenes
HCC23]
gi|307570896|emb|CAR84075.1| undecaprenyl diphosphate synthase [Listeria monocytogenes L99]
Length = 253
Score = 302 bits (774), Expect = 3e-80, Method: Composition-based stats.
Identities = 101/231 (43%), Positives = 141/231 (61%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ IIMDGNGRWA R LPR AGH++G++V + A +GI LT++AFS NW
Sbjct: 23 PIPRHVAIIMDGNGRWAKKRFLPRIAGHKEGMDVVKRVTRYANAMGIDVLTLYAFSTENW 82
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP E+ L+KL F L + N++V V+G R +L D + +++A T T
Sbjct: 83 KRPTDEVDFLMKLPVEFFDSFVPELIEENVRVNVMGYRENLPDHTMRAVEKAIADTAHCT 142
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL L A NY R EI A K +++E + ++ ++ +L +S + DPDL+IRT
Sbjct: 143 GLTLNFALNYGGRSEIITAAKEAMKELEREGKSAENLTEEMLNDHLMSSGLGDPDLLIRT 202
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE RLS+F+LWQ+AYSEF F +WPDFS+E F A+ +Y R RRFGGL
Sbjct: 203 SGELRLSNFMLWQLAYSEFYFTDTHWPDFSKEDFLQAIIEYQNRSRRFGGL 253
>gi|312127158|ref|YP_003992032.1| undecaprenyl diphosphate synthase [Caldicellulosiruptor
hydrothermalis 108]
gi|311777177|gb|ADQ06663.1| undecaprenyl diphosphate synthase [Caldicellulosiruptor
hydrothermalis 108]
Length = 248
Score = 302 bits (774), Expect = 3e-80, Method: Composition-based stats.
Identities = 115/238 (48%), Positives = 152/238 (63%), Gaps = 1/238 (0%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P HI IIMDGNGRWA RGLPR AGHR G + EIV A E+G+K LT++AF
Sbjct: 11 KIDKEKMPQHIAIIMDGNGRWARKRGLPRSAGHRFGAQKLKEIVLFADEIGLKYLTVYAF 70
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSL-KKNNIKVRVIGNRLSLDDDILCVLKEAED 122
S NW+RP E+ L+ L++ F +L K I++RVIG+ LD DI + AE+
Sbjct: 71 STENWKRPKEEVDNLMNLLREFFDTEIENLINKTQIRIRVIGDISKLDKDIQERIVSAEE 130
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
+T+ GL + IA NY +R EI A+KN+ DI+SG + DVD +L KYL T D+PDP
Sbjct: 131 RTKDKKGLCVVIALNYGARQEIINAVKNLALDIKSGKIDIEDVDENLFKKYLYTKDIPDP 190
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IR GE R+S+FLLWQ++Y+EF F WPDF +E A+ Y R+RRFGG+
Sbjct: 191 DLLIRPSGEMRVSNFLLWQISYTEFWFSNVLWPDFKKEHLLKAIEDYQRRERRFGGVK 248
>gi|15603854|ref|NP_246928.1| hypothetical protein PM1989 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|42559876|sp|Q9CJL4|UPPS_PASMU RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|12722429|gb|AAK04073.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 240
Score = 302 bits (773), Expect = 3e-80, Method: Composition-based stats.
Identities = 94/238 (39%), Positives = 141/238 (59%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ ++ P H+ IIMDGNGRWA +G R GH+ G++ E V+ A +VGIK LT++AF
Sbjct: 3 ELDPNNIPQHVAIIMDGNGRWAQQKGKMRIFGHKNGVKAVREAVSYARKVGIKVLTLYAF 62
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP E++ L+ L L L KNNIK+ ++G+ + + +AE
Sbjct: 63 SSENWNRPKKEVNALMALFMQALDLEVKKLHKNNIKLNILGDVTGFSASLQNKIHQAEKL 122
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NT L L IA NY +I +A K++ Q ++ G + ++++ ++ + L T + P D
Sbjct: 123 TENNTALTLNIAANYGGCWDIVQATKSLAQQVKEGKLAVDEINAQVLQQALVTKEQPQVD 182
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
L+IRT GE+R+S+FLLWQ+AY+E F WPDF+ + F A+ Y R RRFGG +
Sbjct: 183 LLIRTSGEQRISNFLLWQIAYAELYFSDVLWPDFNEKEFNEAIIAYQQRHRRFGGAEE 240
>gi|149278815|ref|ZP_01884950.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) [Pedobacter
sp. BAL39]
gi|149230434|gb|EDM35818.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) [Pedobacter
sp. BAL39]
Length = 246
Score = 302 bits (773), Expect = 3e-80, Method: Composition-based stats.
Identities = 98/240 (40%), Positives = 147/240 (61%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ ++ P+HI IIMDGNGRWA +G R GH G+ +IV A++GIK LT++A
Sbjct: 5 EQIDTTRLPEHIAIIMDGNGRWAKNQGKFRHFGHESGVLSLKDIVEGCADIGIKYLTVYA 64
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RP E++ L++L+ S + + +L KNNI++ IG+ SL + LK A D
Sbjct: 65 FSTENWNRPPEEVNMLMELLISTINQETPTLNKNNIRLNAIGDIASLPQKCIDDLKSAMD 124
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NT L +A +YS++ EI A + + + ++ + ++ A L T+++PDP
Sbjct: 125 NTAGNTRCTLTLALSYSAKWEILEAARKLAKKVKDQEINIDEITEENFASQLTTTNIPDP 184
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+L+IRT GE R+S+FLLWQ+AY+E F WPDF RE F A+ Y R+RRFG +S++
Sbjct: 185 ELMIRTSGEHRVSNFLLWQMAYTELYFTETLWPDFKREDLFEAIVDYQKRERRFGKISEQ 244
>gi|158320549|ref|YP_001513056.1| undecaprenyl diphosphate synthase [Alkaliphilus oremlandii OhILAs]
gi|158140748|gb|ABW19060.1| undecaprenyl diphosphate synthase [Alkaliphilus oremlandii OhILAs]
Length = 251
Score = 302 bits (773), Expect = 3e-80, Method: Composition-based stats.
Identities = 111/238 (46%), Positives = 159/238 (66%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
++S+ S P HI IIMDGNGRW R LPR GH+ G+E +++ A+ +G++ LT++
Sbjct: 14 ISSINMGSLPQHIAIIMDGNGRWGTERMLPRNLGHKAGVEALRDVIKTASNIGVQYLTLY 73
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RPVSE+S L+KL+ +L+K L +NN+K+++IG+ L +++ +++A
Sbjct: 74 AFSTENWKRPVSEVSFLMKLLIEYLRKEIAELHENNVKIQIIGDVAGLPKEVIKEIEKAT 133
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T N GL + IA NY SR EI+ AIK I + +E+ + S D+D SL+ +L T+ PD
Sbjct: 134 IKTMNNQGLCVNIALNYGSRAEITDAIKKIAKMVENQEIQSDDIDESLVHSFLYTAATPD 193
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDL+IRT GE RLS+FLLWQ AYSE F YWPDF+ E A+ Y R RRFGG+
Sbjct: 194 PDLLIRTSGELRLSNFLLWQCAYSELWFTDVYWPDFTGEHLIMAITDYQNRKRRFGGI 251
>gi|145638259|ref|ZP_01793869.1| hypothetical protein CGSHiII_05794 [Haemophilus influenzae PittII]
gi|145272588|gb|EDK12495.1| hypothetical protein CGSHiII_05794 [Haemophilus influenzae PittII]
gi|309751413|gb|ADO81397.1| Undecaprenyl pyrophosphate synthetase [Haemophilus influenzae
R2866]
Length = 239
Score = 302 bits (773), Expect = 3e-80, Method: Composition-based stats.
Identities = 96/237 (40%), Positives = 138/237 (58%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ ++ P HI IIMDGNGRWA + R GH G+ + VA A ++G+K LT++AF
Sbjct: 3 ELDQNNIPKHIAIIMDGNGRWAKQKNKMRIFGHTNGVTAVRKAVAYARQIGVKVLTLYAF 62
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP EIS L+ L L + L KNNI +++IG+ + + +K+AE+
Sbjct: 63 SSENWSRPEQEISALMSLFMQALDREVKKLHKNNICLKIIGDVSRFSETLQEKIKKAENL 122
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NT L L IA NY +I +A K I + ++ + D+++S +L T + P D
Sbjct: 123 TEKNTALTLNIAANYGGCWDIVQATKQIAEKVKKEEMSVSDINNSTFQHHLATQNAPPVD 182
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
L+IRT GE+R+S+FLLWQ+AY+E F WPDF++ F A+ Y R RRFGG
Sbjct: 183 LLIRTSGEQRISNFLLWQIAYAELYFSDVLWPDFNQLEFNRAIASYQQRHRRFGGTE 239
>gi|308173616|ref|YP_003920321.1| undecaprenyl pyrophosphate synthase [Bacillus amyloliquefaciens DSM
7]
gi|307606480|emb|CBI42851.1| undecaprenyl pyrophosphate synthase [Bacillus amyloliquefaciens DSM
7]
gi|328553452|gb|AEB23944.1| undecaprenyl pyrophosphate synthase [Bacillus amyloliquefaciens
TA208]
gi|328911757|gb|AEB63353.1| undecaprenyl pyrophosphate synthase [Bacillus amyloliquefaciens
LL3]
Length = 260
Score = 302 bits (773), Expect = 3e-80, Method: Composition-based stats.
Identities = 103/235 (43%), Positives = 148/235 (62%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
++ P HI IIMDGNGRWA R LPR AGH +G++V + A ++G+K LT++AFS
Sbjct: 26 ILKGEIPAHIAIIMDGNGRWAKKRSLPRIAGHHEGMKVVKRVTKLANQLGVKVLTLYAFS 85
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+ L+KL + FL L + N++V++IG+ +L +++A T
Sbjct: 86 TENWKRPKMEVDFLMKLPEEFLNTYLPELIEENVRVKIIGDESALPSHTYKAIEKAVKDT 145
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N GL L A NY R EI A K + + ++SG++ D+D +L +K+L T + DP+L
Sbjct: 146 EQNDGLILNFALNYGGRTEIVNAAKALAEQVKSGTLNIEDIDEALFSKHLMTESIQDPEL 205
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE RLS+F+LWQVAYSEFVF WPDF + F A+ ++ R RRFGG+
Sbjct: 206 LIRTSGEIRLSNFMLWQVAYSEFVFTDVLWPDFKEDHFLKAVGEFQQRGRRFGGI 260
>gi|253573557|ref|ZP_04850900.1| di-trans,poly-cis-decaprenylcistransferase [Paenibacillus sp. oral
taxon 786 str. D14]
gi|251847085|gb|EES75090.1| di-trans,poly-cis-decaprenylcistransferase [Paenibacillus sp. oral
taxon 786 str. D14]
Length = 255
Score = 302 bits (773), Expect = 3e-80, Method: Composition-based stats.
Identities = 103/237 (43%), Positives = 148/237 (62%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S+ + P H+ IIMDGNGRWA G+PR GHR G++ AA E+GI LT++AF
Sbjct: 19 SLSPDNIPKHVAIIMDGNGRWARRLGMPRIVGHRSGMKAVKRATIAADELGISILTLYAF 78
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP E+ L+ L + FL L + N++VR++G+ L + ++EA ++
Sbjct: 79 STENWKRPKDEVDYLMSLPQEFLAIELDELVEKNVQVRMMGHTDELPAHTIAAMEEAIER 138
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NTGL L A NY SR EI+ ++K I + ++SG + D+ I L ++ +PDPD
Sbjct: 139 TKHNTGLILNFALNYGSRREITESVKGIAKAVQSGELSVEDITPDTIESRLLSAGLPDPD 198
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
L+IRT GE RLS+F+LWQ AYSE F +WPDFS+E A+ +Y R RR+GGL+
Sbjct: 199 LLIRTSGELRLSNFMLWQTAYSELWFTDIFWPDFSKEHLVQAVAEYQRRTRRYGGLT 255
>gi|16803355|ref|NP_464840.1| undecaprenyl pyrophosphate synthase [Listeria monocytogenes EGD-e]
gi|224499897|ref|ZP_03668246.1| hypothetical protein LmonF1_09529 [Listeria monocytogenes Finland
1988]
gi|254828676|ref|ZP_05233363.1| undecaprenyl diphosphate synthase [Listeria monocytogenes FSL
N3-165]
gi|42559850|sp|Q8Y7G6|UPPS_LISMO RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|16410731|emb|CAC99393.1| lmo1315 [Listeria monocytogenes EGD-e]
gi|258601079|gb|EEW14404.1| undecaprenyl diphosphate synthase [Listeria monocytogenes FSL
N3-165]
Length = 252
Score = 302 bits (773), Expect = 3e-80, Method: Composition-based stats.
Identities = 102/231 (44%), Positives = 140/231 (60%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ IIMDGNGRWA R LPR AGH++G++V + A +GI LT++AFS NW
Sbjct: 22 PIPRHVAIIMDGNGRWAKKRFLPRIAGHKEGMDVVKRVTRYANAIGIDVLTLYAFSTENW 81
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP E+ L+KL F L + N++V V+G R +L D + +++A T T
Sbjct: 82 KRPTDEVDFLMKLPVEFFDSFVPELIEENVRVNVMGYRENLPDHTMRAVEKAIADTAHCT 141
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL L A NY R EI A K +++E + D+ + +L +S + DPDL+IRT
Sbjct: 142 GLTLNFALNYGGRSEIITAAKEAMKELELEGKSADDLTEEKLNDHLMSSGLGDPDLLIRT 201
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE RLS+F+LWQ+AYSEF F +WPDFS+E F A+ +Y R RRFGGL
Sbjct: 202 SGELRLSNFMLWQLAYSEFYFTDTHWPDFSKEDFLQAIIEYQNRSRRFGGL 252
>gi|257882950|ref|ZP_05662603.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium
1,231,502]
gi|257889271|ref|ZP_05668924.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium
1,231,410]
gi|258615942|ref|ZP_05713712.1| undecaprenyl diphosphate synthase [Enterococcus faecium DO]
gi|260560117|ref|ZP_05832295.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium C68]
gi|293556643|ref|ZP_06675208.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
E1039]
gi|293560206|ref|ZP_06676708.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
E1162]
gi|293567717|ref|ZP_06679059.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
E1071]
gi|294613943|ref|ZP_06693878.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
E1636]
gi|294618729|ref|ZP_06698261.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
E1679]
gi|294620757|ref|ZP_06699964.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
U0317]
gi|314937499|ref|ZP_07844832.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
TX0133a04]
gi|314942158|ref|ZP_07849012.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
TX0133C]
gi|314947502|ref|ZP_07850917.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
TX0082]
gi|314951489|ref|ZP_07854538.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
TX0133A]
gi|314992579|ref|ZP_07857997.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
TX0133B]
gi|314995486|ref|ZP_07860586.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
TX0133a01]
gi|257818608|gb|EEV45936.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium
1,231,502]
gi|257825631|gb|EEV52257.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium
1,231,410]
gi|260073952|gb|EEW62276.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium C68]
gi|291589560|gb|EFF21366.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
E1071]
gi|291593218|gb|EFF24792.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
E1636]
gi|291595042|gb|EFF26387.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
E1679]
gi|291599737|gb|EFF30747.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
U0317]
gi|291601178|gb|EFF31465.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
E1039]
gi|291605878|gb|EFF35310.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
E1162]
gi|313590320|gb|EFR69165.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
TX0133a01]
gi|313592871|gb|EFR71716.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
TX0133B]
gi|313596329|gb|EFR75174.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
TX0133A]
gi|313599081|gb|EFR77926.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
TX0133C]
gi|313643140|gb|EFS07720.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
TX0133a04]
gi|313646052|gb|EFS10632.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
TX0082]
Length = 270
Score = 302 bits (773), Expect = 3e-80, Method: Composition-based stats.
Identities = 106/238 (44%), Positives = 147/238 (61%), Gaps = 4/238 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
P HI IIMDGNGRWA R LPR AGH++G+E ++ A+ +G+K LT++AFS N
Sbjct: 24 GPIPQHIAIIMDGNGRWAQNRRLPRVAGHKEGMETVKKVTKKASRLGVKVLTLYAFSTEN 83
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W+RP E+S L++L F L K N+KV V+G L + ++ A +QT+ N
Sbjct: 84 WKRPKDEVSFLMQLPVDFFDTFVPELIKENVKVHVMGYENVLPEHTQDAVRRAIEQTKNN 143
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPD 183
TG+ L A NY SR EI A++ I +++ G + + ++D LIAK+L T +P DP+
Sbjct: 144 TGMVLNFALNYGSRAEIVTAVQEIAEEVAKGEIHAEEIDDELIAKHLMTGFLPKELQDPE 203
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
L+IRT GE+R+S+FLLWQ+AYSE F WPDF A+ Y RDRRFGG+ K
Sbjct: 204 LMIRTSGEERISNFLLWQIAYSELYFTKALWPDFDGAHLEEAIASYQNRDRRFGGVKK 261
>gi|94263225|ref|ZP_01287042.1| Di-trans-poly-cis-decaprenylcistransferase [delta proteobacterium
MLMS-1]
gi|93456443|gb|EAT06563.1| Di-trans-poly-cis-decaprenylcistransferase [delta proteobacterium
MLMS-1]
Length = 245
Score = 302 bits (773), Expect = 3e-80, Method: Composition-based stats.
Identities = 103/236 (43%), Positives = 148/236 (62%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S P HI IIMDGNGRWA RG PR GH+ G+ E V+ A E+G++ LT++AFS
Sbjct: 4 SGHLPRHIAIIMDGNGRWAKKRGKPRLMGHQAGVRAVRETVSGARELGVEVLTLYAFSTE 63
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+ L+ L++++L+ + + ++++ G L + VLK+A ++T
Sbjct: 64 NWRRPGPEVESLMGLLENYLQNQLDQMLSHGVRLQTCGAIDLLPARVQRVLKDARERTAA 123
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N GL L +A +Y SRDEI RA + + ++ +G ++ IA YLDT+ +PDPDL+I
Sbjct: 124 NDGLILNLALSYGSRDEIVRASRRLAAEVAAGRQAVAAINEETIADYLDTAGLPDPDLLI 183
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE RLS+FLLWQ++YSE F WPDF R+ A++ Y R RRFG S++
Sbjct: 184 RTGGEARLSNFLLWQLSYSELYFTEVLWPDFGRQHLQTAIDDYQQRQRRFGRTSEQ 239
>gi|313623930|gb|EFR94036.1| di-trans,poly-cis-decaprenylcistransferase [Listeria innocua FSL
J1-023]
Length = 253
Score = 302 bits (773), Expect = 4e-80, Method: Composition-based stats.
Identities = 101/231 (43%), Positives = 139/231 (60%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ IIMDGNGRWA R LPR AGH++G++V + A +GI LT++AFS NW
Sbjct: 23 PIPRHVAIIMDGNGRWAKKRFLPRIAGHKEGMDVVKRVTRYANAIGIDVLTLYAFSTENW 82
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP E+ L+KL F L + N++V V+G R +L + + +++A T T
Sbjct: 83 KRPTDEVDFLMKLPVEFFDSFVPELIEENVRVNVMGYRENLPEHTMRAVEKAIADTAHCT 142
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL L A NY R EI A K +++ S D+ L+ +L + + DPDL+IRT
Sbjct: 143 GLTLNFALNYGGRSEIITAAKEAMEELILAGKTSEDLTEELLNDHLMSHGLGDPDLLIRT 202
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE RLS+F+LWQ+AYSEF F +WPDFS+E F A+ +Y R RRFGGL
Sbjct: 203 SGELRLSNFMLWQLAYSEFYFTETHWPDFSKEDFLQAIIEYQNRSRRFGGL 253
>gi|116872746|ref|YP_849527.1| undecaprenyl diphosphate synthase [Listeria welshimeri serovar 6b
str. SLCC5334]
gi|116741624|emb|CAK20748.1| undecaprenyl diphosphate synthase [Listeria welshimeri serovar 6b
str. SLCC5334]
Length = 252
Score = 301 bits (772), Expect = 4e-80, Method: Composition-based stats.
Identities = 101/231 (43%), Positives = 141/231 (61%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ IIMDGNGRWA R LPR AGH++G++V + A+ +GI LT++AFS NW
Sbjct: 22 PIPSHVAIIMDGNGRWAKKRFLPRIAGHKEGMDVVKRVTRYASAIGIDVLTLYAFSTENW 81
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP E+ L+KL F L + N++V V+G R +L + + +++A T T
Sbjct: 82 KRPTDEVDFLMKLPVEFFDSFVPELIEENVRVNVMGYRENLPEHTMRAVEKAIADTSHCT 141
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL L A NY R EI A K +++ S D+ ++ +L +S + DPDL+IRT
Sbjct: 142 GLTLNFALNYGGRSEIITAAKEAMKELALEGKSSEDLTEEILNNHLMSSGLGDPDLLIRT 201
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE RLS+F+LWQ+AYSEF F +WPDFS+E F A+ +Y R RRFGGL
Sbjct: 202 SGELRLSNFMLWQLAYSEFYFTETHWPDFSKEDFLQAIIEYQNRTRRFGGL 252
>gi|16272857|ref|NP_439080.1| hypothetical protein HI0920 [Haemophilus influenzae Rd KW20]
gi|145632298|ref|ZP_01788033.1| UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
[Haemophilus influenzae 3655]
gi|145634088|ref|ZP_01789799.1| UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
[Haemophilus influenzae PittAA]
gi|145641887|ref|ZP_01797461.1| hypothetical protein CGSHiR3021_11219 [Haemophilus influenzae
R3021]
gi|148826436|ref|YP_001291189.1| hypothetical protein CGSHiEE_07415 [Haemophilus influenzae PittEE]
gi|229844025|ref|ZP_04464166.1| hypothetical protein CGSHi6P18H1_06296 [Haemophilus influenzae
6P18H1]
gi|229845971|ref|ZP_04466083.1| hypothetical protein CGSHi7P49H1_03953 [Haemophilus influenzae
7P49H1]
gi|260580009|ref|ZP_05847839.1| di-trans,poly-cis-decaprenylcistransferase [Haemophilus influenzae
RdAW]
gi|1175330|sp|P44938|UPPS_HAEIN RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|1573941|gb|AAC22578.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
gi|144987205|gb|EDJ93735.1| UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
[Haemophilus influenzae 3655]
gi|145268532|gb|EDK08525.1| UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
[Haemophilus influenzae PittAA]
gi|145273366|gb|EDK13238.1| hypothetical protein CGSHiR3021_11219 [Haemophilus influenzae
22.4-21]
gi|148716596|gb|ABQ98806.1| hypothetical protein CGSHiEE_07415 [Haemophilus influenzae PittEE]
gi|229810975|gb|EEP46692.1| hypothetical protein CGSHi7P49H1_03953 [Haemophilus influenzae
7P49H1]
gi|229813019|gb|EEP48707.1| hypothetical protein CGSHi6P18H1_06296 [Haemophilus influenzae
6P18H1]
gi|260093293|gb|EEW77226.1| di-trans,poly-cis-decaprenylcistransferase [Haemophilus influenzae
RdAW]
gi|309973584|gb|ADO96785.1| Undecaprenyl pyrophosphate synthetase [Haemophilus influenzae
R2846]
Length = 239
Score = 301 bits (772), Expect = 4e-80, Method: Composition-based stats.
Identities = 94/237 (39%), Positives = 138/237 (58%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ ++ P H+ IIMDGNGRWA + R GH G+ + VA A ++G++ LT++AF
Sbjct: 3 ELDQTNIPKHVAIIMDGNGRWAKQKNKMRIFGHTNGVTAVRKAVAYARQIGVEVLTLYAF 62
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP EIS L+ L L + L KNNI +++IG+ + + +K+AE+
Sbjct: 63 SSENWSRPEQEISALMSLFMQALDREVKKLHKNNICLKIIGDVSRFSETLQEKIKKAENL 122
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NT L L IA NY +I +A K I + ++ + D+++S +L T + P D
Sbjct: 123 TEKNTALTLNIAANYGGCWDIIQAAKQIAEKVKKEEMSVSDINNSTFQHHLATQNAPPVD 182
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
L+IRT GE+R+S+FLLWQ+AY+E F WPDF++ F A+ Y R RRFGG
Sbjct: 183 LLIRTSGEQRISNFLLWQIAYAELYFSDVLWPDFNQLEFNRAIASYQQRHRRFGGTE 239
>gi|225867812|ref|YP_002743760.1| undecaprenyl pyrophosphate synthetase [Streptococcus equi subsp.
zooepidemicus]
gi|225871278|ref|YP_002747225.1| undecaprenyl pyrophosphate synthetase [Streptococcus equi subsp.
equi 4047]
gi|225700682|emb|CAW95274.1| undecaprenyl pyrophosphate synthetase [Streptococcus equi subsp.
equi 4047]
gi|225701088|emb|CAW97919.1| undecaprenyl pyrophosphate synthetase [Streptococcus equi subsp.
zooepidemicus]
Length = 249
Score = 301 bits (772), Expect = 4e-80, Method: Composition-based stats.
Identities = 112/240 (46%), Positives = 142/240 (59%), Gaps = 4/240 (1%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ P HIGIIMDGNGRWA R PR GH+ G++ E+ AA+++G+K LT++AF
Sbjct: 10 KIVLDRIPKHIGIIMDGNGRWAKKRLKPRVFGHKAGMDALQEVTIAASDLGVKVLTVYAF 69
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP E+S ++ L F K L KNN+KV++IG L D L L+ A +
Sbjct: 70 STENWSRPQDEVSFIMNLPVEFFDKYVPELHKNNVKVQMIGETNRLPKDTLKALEAAIAK 129
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP--- 180
TR NTGL L A NY R EI+ A+ I QD+ + D+ LIA YL T +P
Sbjct: 130 TRQNTGLILNFALNYGGRAEITNAVGLIAQDVLDAKLNPGDITEDLIANYLMTDHLPYLY 189
Query: 181 -DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDLIIRT GE RLS+F+ WQ AYSE F P WPDF R A+ YN R RRFG +
Sbjct: 190 RDPDLIIRTSGELRLSNFMPWQSAYSELYFTPVLWPDFKRAELLKAIEDYNHRHRRFGAI 249
>gi|304404283|ref|ZP_07385945.1| undecaprenyl diphosphate synthase [Paenibacillus curdlanolyticus
YK9]
gi|304347261|gb|EFM13093.1| undecaprenyl diphosphate synthase [Paenibacillus curdlanolyticus
YK9]
Length = 254
Score = 301 bits (772), Expect = 4e-80, Method: Composition-based stats.
Identities = 111/238 (46%), Positives = 156/238 (65%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
V ++ + P H+ IIMDGNGRWA +RGLPR AGH G++V +I AA +GI+ LT++
Sbjct: 17 VHTLTKDNMPKHVAIIMDGNGRWAKSRGLPRIAGHHTGMKVVKQITMAADRLGIQYLTLY 76
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP +E+ L++L + FL L NN++VR++G R +L + L+EA
Sbjct: 77 AFSTENWKRPKAEVDFLMRLPQEFLSIELEELIANNVQVRMMGYRDALPSHTIRALEEAI 136
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T NTGL L A NY SR E++ A+K I + + G + D++ S IA+ L T+ +PD
Sbjct: 137 ARTADNTGLILNFALNYGSRTEMTDAVKRIAEAVRDGELKPEDIEESTIAERLFTNGLPD 196
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDL+IRT GE RLS+F+LWQ+AYSE F YWP+FS F A+ +Y R RR+GGL
Sbjct: 197 PDLLIRTSGELRLSNFMLWQLAYSEMWFTDVYWPEFSESHFHEAIAEYQRRARRYGGL 254
>gi|114566421|ref|YP_753575.1| di-trans,poly-cis-decaprenylcistransferase [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
gi|114337356|gb|ABI68204.1| Undecaprenyl pyrophosphate synthetase [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
Length = 257
Score = 301 bits (772), Expect = 4e-80, Method: Composition-based stats.
Identities = 110/241 (45%), Positives = 148/241 (61%), Gaps = 2/241 (0%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ ++ P HI IIMDGNGRWA R LPR GHR G+ E+V A ++VG+ LT+FAFS
Sbjct: 13 IDQNNLPQHIAIIMDGNGRWANKRLLPRTMGHRAGMSSLKEVVRACSDVGVSTLTVFAFS 72
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP+ E+ L+KL+ +L + L N +++ V+G+ SL + EA T
Sbjct: 73 TENWKRPLQEVDYLMKLLVEYLHRELEELHANAVRINVLGDYNSLPHQCQLEITEALQIT 132
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
R NTGL IA NY SR EI A+K + + +G +C ++ A L TS +PDPDL
Sbjct: 133 RNNTGLKFNIALNYGSRAEIIAAVKKLAAGLLAGEICLEEISEESFAACLTTSGMPDPDL 192
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS--KK 242
+IRT GE R+S+FLLWQ+AY+E WPDFSRE A+ Y R+RRFGGLS K+
Sbjct: 193 LIRTAGEMRVSNFLLWQIAYTELWVTDCLWPDFSREHLMQAIWDYQHRERRFGGLSRNKQ 252
Query: 243 G 243
G
Sbjct: 253 G 253
>gi|260581746|ref|ZP_05849543.1| di-trans,poly-cis-decaprenylcistransferase [Haemophilus influenzae
NT127]
gi|260095339|gb|EEW79230.1| di-trans,poly-cis-decaprenylcistransferase [Haemophilus influenzae
NT127]
Length = 239
Score = 301 bits (772), Expect = 4e-80, Method: Composition-based stats.
Identities = 94/237 (39%), Positives = 138/237 (58%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ ++ P H+ IIMDGNGRWA + R GH G+ + VA A ++G++ LT++AF
Sbjct: 3 ELDQNNIPKHVAIIMDGNGRWAKQKNKMRIFGHTNGVTAVRKAVAYARQIGVEVLTLYAF 62
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP EIS L+ L L + L KNNI +++IG+ + + +K+AE+
Sbjct: 63 SSENWSRPEQEISALMSLFMQALDREVKKLHKNNICLKIIGDVSRFSETLQEKIKKAENL 122
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NT L L IA NY +I +A K I + ++ + D+++S +L T + P D
Sbjct: 123 TEKNTALTLNIAANYGGCWDIIQAAKQIAEKVKKEEMSVSDINNSTFQHHLATQNAPPVD 182
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
L+IRT GE+R+S+FLLWQ+AY+E F WPDF++ F A+ Y R RRFGG
Sbjct: 183 LLIRTSGEQRISNFLLWQIAYAELYFSDVLWPDFNQLEFNRAIASYQQRHRRFGGTE 239
>gi|284801700|ref|YP_003413565.1| hypothetical protein LM5578_1454 [Listeria monocytogenes 08-5578]
gi|284994842|ref|YP_003416610.1| hypothetical protein LM5923_1407 [Listeria monocytogenes 08-5923]
gi|284057262|gb|ADB68203.1| hypothetical protein LM5578_1454 [Listeria monocytogenes 08-5578]
gi|284060309|gb|ADB71248.1| hypothetical protein LM5923_1407 [Listeria monocytogenes 08-5923]
Length = 253
Score = 301 bits (772), Expect = 4e-80, Method: Composition-based stats.
Identities = 102/231 (44%), Positives = 140/231 (60%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ IIMDGNGRWA R LPR AGH++G++V + A +GI LT++AFS NW
Sbjct: 23 PIPRHVAIIMDGNGRWAKKRFLPRIAGHKEGMDVVKRVTRYANAIGIDVLTLYAFSTENW 82
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP E+ L+KL F L + N++V V+G R +L D + +++A T T
Sbjct: 83 KRPTDEVDFLMKLPVEFFDSFVPELIEENVRVNVMGYRENLPDHTMRAVEKAIADTAHCT 142
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL L A NY R EI A K +++E + D+ + +L +S + DPDL+IRT
Sbjct: 143 GLTLNFALNYGGRSEIITAAKEAMKELELEGKSADDLTEEKLNDHLMSSGLGDPDLLIRT 202
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE RLS+F+LWQ+AYSEF F +WPDFS+E F A+ +Y R RRFGGL
Sbjct: 203 SGELRLSNFMLWQLAYSEFYFTDTHWPDFSKEDFLQAIIEYQNRSRRFGGL 253
>gi|239631341|ref|ZP_04674372.1| undecaprenyl pyrophosphate synthetase [Lactobacillus paracasei
subsp. paracasei 8700:2]
gi|301066627|ref|YP_003788650.1| undecaprenyl pyrophosphate synthase [Lactobacillus casei str.
Zhang]
gi|239525806|gb|EEQ64807.1| undecaprenyl pyrophosphate synthetase [Lactobacillus paracasei
subsp. paracasei 8700:2]
gi|300439034|gb|ADK18800.1| Undecaprenyl pyrophosphate synthase [Lactobacillus casei str.
Zhang]
Length = 250
Score = 301 bits (772), Expect = 4e-80, Method: Composition-based stats.
Identities = 107/241 (44%), Positives = 146/241 (60%), Gaps = 3/241 (1%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P HI IIMDGNGRWA R LPR AGH++G++ I AA+ +G+K LT++AF
Sbjct: 10 KLDPARIPAHIAIIMDGNGRWAKRRFLPRVAGHKQGMQNVKTITKAASRLGVKVLTLYAF 69
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP SE++ L++L F L K N+KV V+G L ++A
Sbjct: 70 STENWKRPGSEVNYLMRLPVDFFNDFMPDLIKENVKVEVMGELDDLPPQTRQASEKAMAD 129
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT---SDVP 180
T NTG+ L A NY RDE+ A + + + ++ G + +D+D A L T D+
Sbjct: 130 TANNTGMILNFALNYGGRDELVHAAQKLAKQVQEGELSPNDIDDRHFANALMTGFLGDLA 189
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GE R+S+FLLWQ+AYSE VF+ +YWPDFS A+ +Y RDRRFGGL
Sbjct: 190 DPDLLIRTSGELRISNFLLWQIAYSELVFVDDYWPDFSPAALEAAIAEYQARDRRFGGLK 249
Query: 241 K 241
K
Sbjct: 250 K 250
>gi|52080256|ref|YP_079047.1| undecaprenyl pyrophosphate synthase [Bacillus licheniformis ATCC
14580]
gi|52785633|ref|YP_091462.1| hypothetical protein BLi01874 [Bacillus licheniformis ATCC 14580]
gi|319645964|ref|ZP_08000194.1| UppS protein [Bacillus sp. BT1B_CT2]
gi|52003467|gb|AAU23409.1| undecaprenyl pyrophosphate synthetase [Bacillus licheniformis ATCC
14580]
gi|52348135|gb|AAU40769.1| UppS [Bacillus licheniformis ATCC 14580]
gi|317391714|gb|EFV72511.1| UppS protein [Bacillus sp. BT1B_CT2]
Length = 260
Score = 301 bits (772), Expect = 4e-80, Method: Composition-based stats.
Identities = 103/237 (43%), Positives = 147/237 (62%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+++ P+HI IIMDGNGRWA R +PR AGH +G++V + A E+G+K LT++A
Sbjct: 24 ENILKGEIPEHIAIIMDGNGRWAKKRAMPRIAGHHEGMKVVRQTTKLANELGVKALTLYA 83
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW+RP E+ L+KL + FL L + N++VR+ G+R L + +++A
Sbjct: 84 FSTENWKRPKLEVDFLMKLPEEFLGTYLPELVEENVRVRMTGDREGLPPHTIRAVEKAIR 143
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T N GL L A NY R EI RA K I ++ + G++ + ++D L + YL T + DP
Sbjct: 144 DTENNDGLILNFALNYGGRAEIVRAAKKIAEEAKKGTLNTEEIDEKLFSDYLMTETLQDP 203
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DL+IRT GE RLS+F+LWQ+AYSEF+F WPDF A+ +Y R RRFGG+
Sbjct: 204 DLLIRTSGEIRLSNFMLWQLAYSEFLFTDVLWPDFKDVHLLQAIGEYQRRGRRFGGI 260
>gi|255530897|ref|YP_003091269.1| undecaprenyl diphosphate synthase [Pedobacter heparinus DSM 2366]
gi|255343881|gb|ACU03207.1| undecaprenyl diphosphate synthase [Pedobacter heparinus DSM 2366]
Length = 246
Score = 301 bits (772), Expect = 4e-80, Method: Composition-based stats.
Identities = 98/240 (40%), Positives = 149/240 (62%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ + P+HI IIMDGNGRWA +G R GH G+ +IV ++GIK LT++A
Sbjct: 5 EQIDITRLPEHIAIIMDGNGRWAKNQGKFRAFGHESGVLSVKDIVEGCVDIGIKYLTVYA 64
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RPV E++ L++L+ + + + +L KNNI++ IG+ SL + LK A D
Sbjct: 65 FSTENWNRPVEEVNALMELLITTINQETETLTKNNIRLNAIGDIASLPQKCIEDLKSAMD 124
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
+T NT L +A +YS++ EI A K + +++G + +++ + + L T ++PDP
Sbjct: 125 KTANNTHCTLTLALSYSAKWEIIEAAKKLAVQVKAGKIDIDEINEAHFSAQLTTINMPDP 184
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+L+IRT GE R+S+FLLWQ+AY+E F WPDF RE F A+ Y R+RRFG +S++
Sbjct: 185 ELMIRTSGEHRISNFLLWQMAYTELYFTDTLWPDFRREDLFEAIVDYQKRERRFGKISEQ 244
>gi|303228527|ref|ZP_07315355.1| di-trans,poly-cis-decaprenylcistransferase [Veillonella atypica
ACS-134-V-Col7a]
gi|303232057|ref|ZP_07318760.1| di-trans,poly-cis-decaprenylcistransferase [Veillonella atypica
ACS-049-V-Sch6]
gi|302513163|gb|EFL55202.1| di-trans,poly-cis-decaprenylcistransferase [Veillonella atypica
ACS-049-V-Sch6]
gi|302516774|gb|EFL58688.1| di-trans,poly-cis-decaprenylcistransferase [Veillonella atypica
ACS-134-V-Col7a]
Length = 253
Score = 301 bits (772), Expect = 4e-80, Method: Composition-based stats.
Identities = 102/239 (42%), Positives = 154/239 (64%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ + P H+ IIMDGNGRWA RG+PR GHR G +V EIV AA E+G+K LT++ F
Sbjct: 15 NIDEHNVPRHVAIIMDGNGRWAKRRGMPRSMGHRAGADVLKEIVIAADEIGVKALTVYGF 74
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP E+S L+ LIK +L+K + ++N+++R IG L +++ ++ ++E
Sbjct: 75 STENWKRPEQEVSLLMALIKEYLQKNVQYMHEHNVRIRFIGYIQGLSEELQTIISDSEAL 134
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NTGL L +A NY RDEI R ++ I Q + G + D+ ++ +L T + D D
Sbjct: 135 TKNNTGLTLQLAINYGGRDEIVRTVQGIAQSVLEGQLAVQDITEQYVSSHLYTQEFSDVD 194
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IR + R+S+FLLWQ+AY+EF F +WPDF++E A+ Y R+RRFGGL ++
Sbjct: 195 LLIRPSKDYRISNFLLWQLAYAEFWFTDLHWPDFTKETLLEAIAAYQKRERRFGGLQEE 253
>gi|288904424|ref|YP_003429645.1| undecaprenyl diphosphate synthase [Streptococcus gallolyticus
UCN34]
gi|306830457|ref|ZP_07463627.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
gallolyticus subsp. gallolyticus TX20005]
gi|306832694|ref|ZP_07465831.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus bovis
ATCC 700338]
gi|325977421|ref|YP_004287137.1| undecaprenyl pyrophosphate synthetase [Streptococcus gallolyticus
subsp. gallolyticus ATCC BAA-2069]
gi|288731149|emb|CBI12697.1| undecaprenyl diphosphate synthase [Streptococcus gallolyticus
UCN34]
gi|304425150|gb|EFM28279.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus bovis
ATCC 700338]
gi|304427482|gb|EFM30584.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
gallolyticus subsp. gallolyticus TX20005]
gi|325177349|emb|CBZ47393.1| undecaprenyl pyrophosphate synthetase [Streptococcus gallolyticus
subsp. gallolyticus ATCC BAA-2069]
Length = 249
Score = 301 bits (772), Expect = 4e-80, Method: Composition-based stats.
Identities = 108/240 (45%), Positives = 147/240 (61%), Gaps = 4/240 (1%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ P HIGIIMDGNGRWA R PR GH+ G++ ++ AA+E+G+K LT++AF
Sbjct: 10 AISLEKIPKHIGIIMDGNGRWAKKRMQPRVMGHKAGMDALQDVTIAASELGVKVLTVYAF 69
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP E+ ++ L F K L NN+KV+VIG L D +K A ++
Sbjct: 70 STENWSRPEDEVKFIMNLPVEFFDKYVPELDANNVKVQVIGETDRLPKDTFDAMKRACEK 129
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP--- 180
T+ N+GL L A NY R EI+ A+KNI Q++ + D+ +I+ +L T+ +P
Sbjct: 130 TKHNSGLILNFALNYGGRSEITEAVKNIAQEVLEAKINPDDITEDVISNHLMTNHLPYLY 189
Query: 181 -DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDLIIRT GE RLS+FL WQ AYSEF F P WPDF ++ A+ +YN R RRFGG+
Sbjct: 190 RDPDLIIRTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKDELIKAIAEYNRRHRRFGGI 249
>gi|289423560|ref|ZP_06425361.1| undecaprenyl pyrophosphate synthetase 1 [Peptostreptococcus
anaerobius 653-L]
gi|289156062|gb|EFD04726.1| undecaprenyl pyrophosphate synthetase 1 [Peptostreptococcus
anaerobius 653-L]
Length = 243
Score = 301 bits (772), Expect = 4e-80, Method: Composition-based stats.
Identities = 104/236 (44%), Positives = 151/236 (63%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P HI IIMDGNGRWA +R +PR GH+ G+E ++V + +G+K LT++AFS
Sbjct: 8 IDLGRVPKHIAIIMDGNGRWAKSRMMPRTYGHKMGVETIRKVVKECSRLGVKYLTLYAFS 67
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E++ L+ L+ S+L+K L KNN+K+ IG+ L + L ++ D+T
Sbjct: 68 TENWKRPADEVNALMSLLVSYLRKELAELHKNNVKILTIGDISKLPQACIDELNKSIDET 127
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NTGL L +A NY SR +I A+ I + +E G + D+D +I+ + T ++ DPDL
Sbjct: 128 KDNTGLVLSLALNYGSRADIKSAVTRIAKMVEEGKISIDDIDDEMISSSMSTRNIVDPDL 187
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
+IRT GE+RLS+FLLW+VAYSEF F ++WPDF E A+ Y RDRRFG +
Sbjct: 188 VIRTSGEQRLSNFLLWEVAYSEFYFTDKHWPDFDEEALQEAIYNYQARDRRFGNVK 243
>gi|319745863|gb|EFV98153.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
agalactiae ATCC 13813]
Length = 239
Score = 301 bits (772), Expect = 4e-80, Method: Composition-based stats.
Identities = 109/239 (45%), Positives = 143/239 (59%), Gaps = 4/239 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M P HIGIIMDGNGRWA R PR GH+ G++ E+ AA+E+G+K LT++AFS
Sbjct: 1 MPLEKIPAHIGIIMDGNGRWAKKRLKPRVMGHKAGMDALQEVTIAASELGVKVLTVYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP E+ ++ L F K L KNN++V+VIG+ L ++ A +T
Sbjct: 61 TENWSRPDDEVKFIMNLPVEFFDKYVPELDKNNVRVQVIGDTHKLPKATYDAMQRACLRT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP---- 180
+ N+GL L A NY R EI+ AIK I QD+ + D+ L+A +L T+ +P
Sbjct: 121 KHNSGLVLNFALNYGGRSEITNAIKEIAQDVLEAKLNPDDITEDLVANHLMTNSLPYLYR 180
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDLIIRT GE RLS+FL WQ AYSEF F P WPDF ++ A+ YN R RRFG +
Sbjct: 181 DPDLIIRTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKDELHKAIVDYNQRHRRFGSV 239
>gi|284928892|ref|YP_003421414.1| undecaprenyl diphosphate synthase [cyanobacterium UCYN-A]
gi|284809351|gb|ADB95056.1| undecaprenyl diphosphate synthase [cyanobacterium UCYN-A]
Length = 250
Score = 301 bits (772), Expect = 4e-80, Method: Composition-based stats.
Identities = 96/239 (40%), Positives = 139/239 (58%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P HI +IMDGNGRWA RGLPR GH++G+ +++ ++GI LT
Sbjct: 12 LPTDLDQKRLPSHIAVIMDGNGRWAKNRGLPRIVGHQRGVGTLKDLLRYCRDLGIPALTA 71
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP+ E+ L+ L ++ L + + N+K+R +GN L + + +
Sbjct: 72 YAFSTENWGRPLQEVEFLMALFETVLHRELQEMMAENVKIRFVGNLEELPSSLQSEIFRS 131
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
T NTG+ IA NY R EI ++ + I ++ G + +D+D SL YL T D+P
Sbjct: 132 MKNTENNTGVQFTIATNYGGRQEIVQSCRTIAMKVKQGLLNINDIDESLFENYLYTKDIP 191
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDL+IRT GE RLS+FLLWQ+AY+E WPDF+ + F+ AL +Y R RRFG L
Sbjct: 192 HPDLLIRTSGEMRLSNFLLWQLAYAEIYVTSTLWPDFTYKTFYEALLEYQHRQRRFGKL 250
>gi|254424564|ref|ZP_05038282.1| undecaprenyl diphosphate synthase [Synechococcus sp. PCC 7335]
gi|196192053|gb|EDX87017.1| undecaprenyl diphosphate synthase [Synechococcus sp. PCC 7335]
Length = 250
Score = 301 bits (772), Expect = 4e-80, Method: Composition-based stats.
Identities = 92/240 (38%), Positives = 144/240 (60%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P H+ +IMDGNGRWA +RGLPR GHRKG++ +++ + G++ LT
Sbjct: 11 LPTDLAQGQMPSHVAVIMDGNGRWAKSRGLPRIMGHRKGVDTLKKLLRCCRDWGVEALTA 70
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP E+ L+ L + L++ + + N+++ +G+ L+L + + + A
Sbjct: 71 YAFSTENWGRPTKEVDFLMTLFERVLRQELQEMMEENVRIEFVGDLLALPETLQKEIDRA 130
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
T+ N G+ +A NY R EI +A + I ++ G + D+D SL +++L TSD+
Sbjct: 131 VTLTKENYGIRFSVATNYGGRQEILQACRAIATQVKQGHLNPEDIDESLFSRHLYTSDIS 190
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GE R+S+FLLWQ+AYSEF WPDF F A+ + R+RRFG ++
Sbjct: 191 DPDLLIRTSGEMRISNFLLWQLAYSEFYITDTLWPDFDTSEFHQAMKAFQRRERRFGKVN 250
>gi|167766542|ref|ZP_02438595.1| hypothetical protein CLOSS21_01048 [Clostridium sp. SS2/1]
gi|167711665|gb|EDS22244.1| hypothetical protein CLOSS21_01048 [Clostridium sp. SS2/1]
Length = 250
Score = 301 bits (772), Expect = 4e-80, Method: Composition-based stats.
Identities = 111/236 (47%), Positives = 162/236 (68%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
M + + P H+ II+DGNGRWA R LPR GHR+G +V +I+ A ++GIK LT++AF
Sbjct: 15 QMENLNIPQHVAIILDGNGRWAKKRHLPRNMGHRQGSKVVEKIIEDAHDLGIKYLTVYAF 74
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP E++ L+KL++ +LK KNN+KVRVIG+ L +D+ + E E
Sbjct: 75 STENWKRPQDEVNALMKLLRDYLKTCIKRANKNNMKVRVIGDITGLSEDLQEKIVELEKA 134
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
++ NTG+N IA NY SRDE+ RA++++ D+ SG++ ++ + YLDT ++PDPD
Sbjct: 135 SKDNTGINFTIALNYGSRDEMVRAMRHMADDLSSGNLSKDEITEEVFNGYLDTKELPDPD 194
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
L+IRT GE+RLS+F+LWQ+AY+EF F WPDF+++ A+ YN RDRRFGG+
Sbjct: 195 LMIRTSGEERLSNFMLWQLAYTEFYFTDVLWPDFNKKELIKAIEYYNGRDRRFGGI 250
>gi|302872258|ref|YP_003840894.1| undecaprenyl diphosphate synthase [Caldicellulosiruptor obsidiansis
OB47]
gi|302575117|gb|ADL42908.1| undecaprenyl diphosphate synthase [Caldicellulosiruptor obsidiansis
OB47]
Length = 248
Score = 301 bits (772), Expect = 4e-80, Method: Composition-based stats.
Identities = 116/232 (50%), Positives = 149/232 (64%), Gaps = 1/232 (0%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI IIMDGNGRWA RGLPR AGHR G + EIV A E+G+K LT++AFS NW+
Sbjct: 17 MPQHIAIIMDGNGRWAKKRGLPRSAGHRFGAQKLKEIVLFADEIGLKYLTVYAFSTENWK 76
Query: 70 RPVSEISELVKLIKSFLKKGFYSL-KKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+ L+ L++ F +L K I++RVIG+ LD DI + AE++T+
Sbjct: 77 RPKDEVENLMNLLREFFDTEIENLINKTQIRIRVIGDISKLDKDIQERIVSAEERTKDKR 136
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL + IA NY R EI A+KN+ DI+SG + DVD L KYL T D+PDPDL+IR
Sbjct: 137 GLCVVIALNYGGRQEIINAVKNLALDIKSGKIDIEDVDEDLFKKYLYTKDIPDPDLLIRP 196
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
GE R+S+FLLWQ++Y+EF F WPDF +E A+ Y RDRRFGG+
Sbjct: 197 SGEMRVSNFLLWQISYTEFWFSNVLWPDFKKEHLLKAIEDYQKRDRRFGGVK 248
>gi|194335582|ref|YP_002017376.1| undecaprenyl diphosphate synthase [Pelodictyon phaeoclathratiforme
BU-1]
gi|194308059|gb|ACF42759.1| undecaprenyl diphosphate synthase [Pelodictyon phaeoclathratiforme
BU-1]
Length = 282
Score = 301 bits (772), Expect = 5e-80, Method: Composition-based stats.
Identities = 99/233 (42%), Positives = 150/233 (64%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P+HI IIMDGNGRWA +G R GH G+E ++V + +++GI+ LT+F FS NW+
Sbjct: 39 LPNHIAIIMDGNGRWARLKGKTRIEGHVAGVESVRDVVESCSQLGIRYLTLFTFSTENWK 98
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+S L++L+ + + L NNI++ VIG L + + VL + + T+ N+
Sbjct: 99 RPEKEVSALMQLLVKVIGRETRKLHDNNIRLNVIGEMEILPEKVRSVLTKTMELTKNNSK 158
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L IA +YS + ++++A + I D+++G + + VD L+A YL TS +PDPDL+IRT
Sbjct: 159 LMLNIALSYSGQWDLTQACQAIAFDVQAGRINAESVDEHLLASYLSTSSIPDPDLLIRTS 218
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE R+S+F+LWQ AYSE F YWPDF R + A+ ++ R+RRFG S++
Sbjct: 219 GEFRISNFMLWQCAYSEIFFTNTYWPDFHRSQLYEAVREFQSRERRFGQTSEQ 271
>gi|16078716|ref|NP_389535.1| undecaprenyl pyrophosphate synthase [Bacillus subtilis subsp.
subtilis str. 168]
gi|221309531|ref|ZP_03591378.1| undecaprenyl pyrophosphate synthetase [Bacillus subtilis subsp.
subtilis str. 168]
gi|221313855|ref|ZP_03595660.1| undecaprenyl pyrophosphate synthetase [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221318778|ref|ZP_03600072.1| undecaprenyl pyrophosphate synthetase [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221323050|ref|ZP_03604344.1| undecaprenyl pyrophosphate synthetase [Bacillus subtilis subsp.
subtilis str. SMY]
gi|321315420|ref|YP_004207707.1| undecaprenyl pyrophosphate synthase [Bacillus subtilis BSn5]
gi|3183468|sp|O31751|UPPS_BACSU RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|2634025|emb|CAB13526.1| undecaprenyl pyrophosphate synthase [Bacillus subtilis subsp.
subtilis str. 168]
gi|291484208|dbj|BAI85283.1| undecaprenyl pyrophosphate synthetase [Bacillus subtilis subsp.
natto BEST195]
gi|320021694|gb|ADV96680.1| undecaprenyl pyrophosphate synthase [Bacillus subtilis BSn5]
Length = 260
Score = 301 bits (772), Expect = 5e-80, Method: Composition-based stats.
Identities = 107/235 (45%), Positives = 148/235 (62%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
++ P+HI IIMDGNGRWA R LPR AGH +G++V A E+G+K LT++AFS
Sbjct: 26 ILKGEIPEHIAIIMDGNGRWAKKRSLPRIAGHHEGMKVVKRTTKLANELGVKVLTLYAFS 85
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+ L+KL + FL L + N++VR+IG+ +L L +++A T
Sbjct: 86 TENWKRPKMEVDFLMKLPEEFLNTYLPELVEENVQVRIIGDETALPAHTLRAIEKAVQDT 145
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N G+ L A NY R EI A K++ + ++ GS+ D+D SL + YL T + DP+L
Sbjct: 146 AQNDGMILNFALNYGGRTEIVSAAKSLAEKVKEGSLNIEDIDESLFSTYLMTESLQDPEL 205
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE RLS+F+LWQVAYSEFVF WPDF + F AL ++ R RRFGG+
Sbjct: 206 LIRTSGEIRLSNFMLWQVAYSEFVFTDVLWPDFKEDHFLQALGEFQQRGRRFGGI 260
>gi|251781670|ref|YP_002995972.1| undecaprenyl pyrophosphate synthase [Streptococcus dysgalactiae
subsp. equisimilis GGS_124]
gi|242390299|dbj|BAH80758.1| undecaprenyl pyrophosphate synthetase [Streptococcus dysgalactiae
subsp. equisimilis GGS_124]
gi|323126463|gb|ADX23760.1| Undecaprenyl pyrophosphate synthetase [Streptococcus dysgalactiae
subsp. equisimilis ATCC 12394]
Length = 249
Score = 301 bits (772), Expect = 5e-80, Method: Composition-based stats.
Identities = 112/235 (47%), Positives = 143/235 (60%), Gaps = 4/235 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HIGIIMDGNGRWA R PR GH+ G++ ++ AA+++G+K LT++AFS NW
Sbjct: 15 KIPKHIGIIMDGNGRWAKKRLKPRVFGHKAGMDALQDVTIAASDLGVKVLTVYAFSTENW 74
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+S ++ L F K +L KNN+KV++IG L D L L A D+T+ NT
Sbjct: 75 SRPQDEVSFIMNLPVEFFDKYVPTLHKNNVKVQMIGETHRLPADTLTALNAAIDKTKRNT 134
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDL 184
GL L A NY R EI+ A++ I QD+ + D+ LIA YL T +P DPDL
Sbjct: 135 GLILNFALNYGGRAEITSAVRLIAQDVLDAKLNPGDITEDLIANYLMTDHLPYLYRDPDL 194
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IIRT GE RLS+FL WQ AYSEF F P WPDF + A+ YN R RRFG +
Sbjct: 195 IIRTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKAELLKAIADYNRRQRRFGKV 249
>gi|332365815|gb|EGJ43572.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sanguinis
SK355]
Length = 249
Score = 301 bits (772), Expect = 5e-80, Method: Composition-based stats.
Identities = 105/235 (44%), Positives = 145/235 (61%), Gaps = 4/235 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P HI +IMDGNGRWA R PR GH+ G+E ++ AA E+G++ LT++AFS NW
Sbjct: 15 NVPKHIAVIMDGNGRWAKKRMQPRVFGHKAGMETLQKVTIAAKEMGVQVLTVYAFSTENW 74
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+S ++ L F + L KNN+K+++IG+ L L++AE T+LNT
Sbjct: 75 SRPEKEVSFIMNLPVEFYDRYVPELHKNNVKIQMIGDTAKLPKATFEALEKAESLTKLNT 134
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDL 184
GL L A NY R EI++A+K I QD+ + D+ +I YL TS++P DPDL
Sbjct: 135 GLILNFALNYGGRYEINQAVKEIAQDVLDAKLSPGDITEDIIGNYLYTSNLPKMLRDPDL 194
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE RLS+FL WQ AYSE F WPDF + A+ +Y+ R+RRFGG+
Sbjct: 195 VIRTSGELRLSNFLPWQSAYSELYFTDILWPDFDEKALKAAIAEYSRRNRRFGGV 249
>gi|325686589|gb|EGD28615.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sanguinis
SK72]
gi|325695489|gb|EGD37389.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sanguinis
SK150]
Length = 249
Score = 301 bits (772), Expect = 5e-80, Method: Composition-based stats.
Identities = 105/235 (44%), Positives = 146/235 (62%), Gaps = 4/235 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P HI +IMDGNGRWA R PR GH+ G+E ++ AA E+G++ LT++AFS NW
Sbjct: 15 NVPKHIAVIMDGNGRWAKKRMQPRVFGHKAGMETLQKVTIAAKEMGVQVLTVYAFSTENW 74
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+S ++ L F + L KNN+K+++IG+ L + L++AE T+LNT
Sbjct: 75 SRPEKEVSFIMNLPVEFYDRYVPELHKNNVKIQMIGDTAKLPEATFEALEKAESLTKLNT 134
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDL 184
GL L A NY R EI++A+K I QD+ + D+ +I YL TS++P DPDL
Sbjct: 135 GLILNFALNYGGRYEINQAVKLIAQDVLDAKLSPGDITEEVIGNYLYTSNLPKMLRDPDL 194
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE RLS+FL WQ AYSE F WPDF + A+ +Y+ R+RRFGG+
Sbjct: 195 VIRTSGELRLSNFLPWQSAYSELYFTDILWPDFDEKALKAAIAEYSRRNRRFGGV 249
>gi|163753162|ref|ZP_02160286.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) [Kordia
algicida OT-1]
gi|161326894|gb|EDP98219.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) [Kordia
algicida OT-1]
Length = 246
Score = 301 bits (771), Expect = 5e-80, Method: Composition-based stats.
Identities = 104/242 (42%), Positives = 149/242 (61%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P H+ IIMDGNGRWA +G R GH G + + V A A +GIKNLT+
Sbjct: 3 LEEKIQKDFLPQHLAIIMDGNGRWAKQKGKLRVFGHENGSKAVKQTVEACARLGIKNLTL 62
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP E+ L++L+ S LKK L KNNIK++ IG+ +L L E
Sbjct: 63 YAFSTENWNRPKLEVEALMRLLVSSLKKEQKLLLKNNIKLQAIGSLETLPKKAKKELFEV 122
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
++T+ NT + L +A +Y SR+EI A+K I +++ + +D S+I ++L T ++P
Sbjct: 123 IEKTKDNTHMTLTLALSYGSREEIKNAVKEICHKVKNNIISLETIDESIINQHLYTQNLP 182
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
D DL+IRT GE R+S+FLLWQ+AY+E F WPDFS+E + AL Y R+RRFG S
Sbjct: 183 DVDLLIRTSGEHRISNFLLWQIAYAELYFTNVLWPDFSKEHLYEALINYQNRERRFGKTS 242
Query: 241 KK 242
++
Sbjct: 243 EQ 244
>gi|255692418|ref|ZP_05416093.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides finegoldii
DSM 17565]
gi|260621886|gb|EEX44757.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides finegoldii
DSM 17565]
Length = 244
Score = 301 bits (771), Expect = 5e-80, Method: Composition-based stats.
Identities = 102/241 (42%), Positives = 146/241 (60%), Gaps = 2/241 (0%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + + P H+ IIMDGNGRWA RG R GH G E I AA +GIK LT++
Sbjct: 4 IEQIDKTRIPQHVAIIMDGNGRWAKQRGKERTYGHHAGAETVQRITEDAARLGIKYLTLY 63
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
FS NW RP E++ L+ L+ +K+ +L KNN++ VIG+ L ++ L
Sbjct: 64 TFSTENWSRPQEEVTALMNLLLDSIKEE--TLMKNNLRFNVIGDLKKLPVEVQDSLTSCI 121
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
D + NTG+ L +A +YSSR EI+ A++ I I+ G + + IA +L+T+ +PD
Sbjct: 122 DHSAKNTGMCLVLALSYSSRWEITEAVRQIATKIKEGDLSPEQITDECIASHLNTNFMPD 181
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL+IRTGGE RLS++LLWQ AYSE F +WPDF +E + A+ +Y R+RRFG S+
Sbjct: 182 PDLLIRTGGEIRLSNYLLWQCAYSELYFCDIFWPDFDKEELYKAVCEYQQRERRFGKTSE 241
Query: 242 K 242
+
Sbjct: 242 Q 242
>gi|76787788|ref|YP_330469.1| undecaprenyl pyrophosphate synthase [Streptococcus agalactiae A909]
gi|77405648|ref|ZP_00782736.1| undecaprenyl diphosphate synthase [Streptococcus agalactiae H36B]
gi|77412295|ref|ZP_00788610.1| undecaprenyl diphosphate synthase [Streptococcus agalactiae CJB111]
gi|76562845|gb|ABA45429.1| undecaprenyl diphosphate synthase [Streptococcus agalactiae A909]
gi|77161642|gb|EAO72638.1| undecaprenyl diphosphate synthase [Streptococcus agalactiae CJB111]
gi|77175721|gb|EAO78502.1| undecaprenyl diphosphate synthase [Streptococcus agalactiae H36B]
Length = 250
Score = 301 bits (771), Expect = 5e-80, Method: Composition-based stats.
Identities = 109/240 (45%), Positives = 143/240 (59%), Gaps = 4/240 (1%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
M P HIGIIMDGNGRWA R PR GH+ G++ E+ AA+E+G+K LT++AF
Sbjct: 11 EMPLEKIPAHIGIIMDGNGRWAKKRLKPRVMGHKAGMDALQEVTIAASELGVKVLTVYAF 70
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP E+ ++ L F K L KNN++V+VIG+ L ++ A +
Sbjct: 71 STENWSRPDDEVKFIMNLPVEFFDKYVPELDKNNVRVQVIGDTHKLPKATYDAMQRACLR 130
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP--- 180
T+ N+GL L A NY R EI+ AIK I QD+ + D+ L+A +L T+ +P
Sbjct: 131 TKHNSGLVLNFALNYGGRSEITNAIKEIAQDVLEAKLNPDDITEDLVANHLMTNSLPYLY 190
Query: 181 -DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDLIIRT GE RLS+FL WQ AYSEF F P WPDF ++ A+ YN R RRFG +
Sbjct: 191 RDPDLIIRTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKDELHKAIVDYNQRHRRFGSV 250
>gi|241895747|ref|ZP_04783043.1| di-trans-poly-cis-decaprenylcistransferase [Weissella
paramesenteroides ATCC 33313]
gi|241870790|gb|EER74541.1| di-trans-poly-cis-decaprenylcistransferase [Weissella
paramesenteroides ATCC 33313]
Length = 263
Score = 301 bits (771), Expect = 5e-80, Method: Composition-based stats.
Identities = 109/243 (44%), Positives = 154/243 (63%), Gaps = 3/243 (1%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
V + + P HI IIMDGNGRWA + LPR AGH++G+EV +I AA+++G+K LT++
Sbjct: 15 VVELDNQQIPQHIAIIMDGNGRWAKGQNLPRVAGHQRGMEVVKDITKAASDLGVKVLTLY 74
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP +E+ L+KL F L NNI+V VIG L ++ A
Sbjct: 75 AFSTENWKRPETEVGFLMKLPGKFFDTFVPDLIANNIRVNVIGYVDQLPASTQKAVQNAI 134
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS---D 178
QT NTG+ L A NY R EI ++ I Q + SG + D+D +++++ + T+ +
Sbjct: 135 AQTANNTGMVLNFALNYGGRAEIVSGVQQIAQRVLSGEIKPEDIDENMLSQSMMTASLNE 194
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DPDL+IRT GE+RLS+FLLWQ+AYSEFVF+ E+WP+F+ + A+ Y R RRFGG
Sbjct: 195 YADPDLLIRTSGEERLSNFLLWQIAYSEFVFVDEHWPEFTASVLKRAIKIYQSRHRRFGG 254
Query: 239 LSK 241
LS+
Sbjct: 255 LSE 257
>gi|312793073|ref|YP_004025996.1| undecaprenyl diphosphate synthase [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312876746|ref|ZP_07736725.1| undecaprenyl diphosphate synthase [Caldicellulosiruptor
lactoaceticus 6A]
gi|311796477|gb|EFR12827.1| undecaprenyl diphosphate synthase [Caldicellulosiruptor
lactoaceticus 6A]
gi|312180213|gb|ADQ40383.1| undecaprenyl diphosphate synthase [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 248
Score = 301 bits (771), Expect = 5e-80, Method: Composition-based stats.
Identities = 115/238 (48%), Positives = 152/238 (63%), Gaps = 1/238 (0%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P HI IIMDGNGRWA RGLPR AGHR G + EIV A E+G+K LT++AF
Sbjct: 11 KIDKGKMPQHIAIIMDGNGRWARKRGLPRSAGHRFGAQKLKEIVLFADEIGLKYLTVYAF 70
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSL-KKNNIKVRVIGNRLSLDDDILCVLKEAED 122
S NW+RP E+ L+ L++ F +L K I++RVIG+ LD DI + AE+
Sbjct: 71 STENWKRPKEEVDNLMNLLREFFDTEIENLINKTQIRIRVIGDISKLDKDIQERIVSAEE 130
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
+T+ GL + IA NY +R EI A+KN+ DI+SG + DVD +L KYL T D+PDP
Sbjct: 131 RTKDKRGLCVVIALNYGARQEIINAVKNLALDIKSGKIDIEDVDENLFKKYLYTRDIPDP 190
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IR GE R+S+FLLWQ++Y+EF F WPDF +E A+ Y R+RRFGG+
Sbjct: 191 DLLIRPSGEMRVSNFLLWQISYTEFWFSNVLWPDFKKEHLLKAIEDYQKRERRFGGVK 248
>gi|110598889|ref|ZP_01387140.1| undecaprenyl diphosphate synthase [Chlorobium ferrooxidans DSM
13031]
gi|110339502|gb|EAT58026.1| undecaprenyl diphosphate synthase [Chlorobium ferrooxidans DSM
13031]
Length = 282
Score = 301 bits (771), Expect = 6e-80, Method: Composition-based stats.
Identities = 104/243 (42%), Positives = 155/243 (63%), Gaps = 1/243 (0%)
Query: 1 MVASMMSS-SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ A + SS P HI IIMDGNGRWA +G R GH G++ ++V AA+++GIK LT
Sbjct: 29 LQAELKSSCQLPCHIAIIMDGNGRWARLKGKTRLEGHIAGVDSVRDVVEAASQLGIKYLT 88
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
+F FS NW RP EIS L++L+ + + L NNI++ VIGN L + + VL+
Sbjct: 89 LFTFSTENWNRPEKEISALMQLLVRVIGRETKKLHDNNIRLNVIGNIARLPEKVRAVLQN 148
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV 179
+ T+ N L L IA +YS + +I +A +++F +I++G++ +D L++ YL T+ +
Sbjct: 149 TMELTKNNNKLVLNIALSYSGKWDIVQACRSMFFEIQAGNIDPDAIDEQLLSSYLSTASM 208
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDP+L+IRT GE R+S+F+LWQ AYSE F YWPDF R + A+ +Y R+RRFG
Sbjct: 209 PDPELLIRTSGEFRISNFMLWQNAYSEIYFTNAYWPDFRRSQLYDAILEYQNRERRFGQT 268
Query: 240 SKK 242
S++
Sbjct: 269 SEQ 271
>gi|149183488|ref|ZP_01861917.1| UppS [Bacillus sp. SG-1]
gi|148848800|gb|EDL63021.1| UppS [Bacillus sp. SG-1]
Length = 264
Score = 301 bits (771), Expect = 6e-80, Method: Composition-based stats.
Identities = 105/239 (43%), Positives = 147/239 (61%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ P+HI IIMDGNGRWA R LPR AGH +G++V +I A +G+K LT++AF
Sbjct: 23 EVLKHRIPNHIAIIMDGNGRWAKKRALPRIAGHHEGMKVVRKITKMANALGVKTLTLYAF 82
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP E+ L+KL + FL L + N+KV ++G +L +K+A +
Sbjct: 83 STENWKRPKMEVEYLMKLPEEFLGTFLPELIEENVKVTMMGYEDNLPSHTSNAIKKAMKE 142
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T N GL L A NY SR EI A+K++ D+ +G + + ++ + YL T D+PDPD
Sbjct: 143 TEHNDGLVLNFALNYGSRFEIIEAVKDVLNDVSNGIIDKNQINEETFSNYLMTKDLPDPD 202
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRT GE RLS+F+LWQ+AY+EF F P WPDF E A+ Y R RRFGG+ +
Sbjct: 203 LLIRTSGEIRLSNFMLWQLAYTEFWFTPVLWPDFQEEHLIEAIEVYQGRSRRFGGVQSE 261
>gi|300868262|ref|ZP_07112892.1| undecaprenyl pyrophosphate synthase [Oscillatoria sp. PCC 6506]
gi|300333744|emb|CBN58076.1| undecaprenyl pyrophosphate synthase [Oscillatoria sp. PCC 6506]
Length = 249
Score = 301 bits (771), Expect = 6e-80, Method: Composition-based stats.
Identities = 92/239 (38%), Positives = 142/239 (59%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ A + P H+ +IMDGNGRWA +GLPR AGH +G E++ + GI+ LT
Sbjct: 11 LPADLDRERLPKHVAVIMDGNGRWAKRQGLPRIAGHSRGASTLKELLRCCKDWGIEALTT 70
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP+ E+ L+ L + L++ + + +K++ +GN +L + ++ +
Sbjct: 71 YAFSTENWGRPLEEVDFLMSLFEGKLRQELREMVQEGVKIKFMGNLQALPKSLQAEIERS 130
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+T N G+ +A NY R+EI +A + I ++ G + ++D +L +YL T+DV
Sbjct: 131 VAETEQNQGIRFTVATNYGGREEIVQAARAIASQVKLGQLQPEEIDEALFKRYLYTADVC 190
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRT GE RLS+F+LWQ+AY+E WPDF R+ F AL Y R+RRFG +
Sbjct: 191 DPDLLIRTSGEMRLSNFMLWQIAYAEIYITDTLWPDFDRKEFHRALYAYQQRNRRFGKV 249
>gi|237715310|ref|ZP_04545791.1| undecaprenyl pyrophosphate synthetase [Bacteroides sp. D1]
gi|237719661|ref|ZP_04550142.1| undecaprenyl pyrophosphate synthetase [Bacteroides sp. 2_2_4]
gi|262405151|ref|ZP_06081701.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides sp. 2_1_22]
gi|294643549|ref|ZP_06721355.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides ovatus SD
CC 2a]
gi|294807056|ref|ZP_06765875.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides
xylanisolvens SD CC 1b]
gi|298482440|ref|ZP_07000626.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides sp. D22]
gi|229444619|gb|EEO50410.1| undecaprenyl pyrophosphate synthetase [Bacteroides sp. D1]
gi|229450930|gb|EEO56721.1| undecaprenyl pyrophosphate synthetase [Bacteroides sp. 2_2_4]
gi|262356026|gb|EEZ05116.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides sp. 2_1_22]
gi|292641124|gb|EFF59336.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides ovatus SD
CC 2a]
gi|294445755|gb|EFG14403.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides
xylanisolvens SD CC 1b]
gi|298271419|gb|EFI12994.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides sp. D22]
Length = 244
Score = 301 bits (771), Expect = 6e-80, Method: Composition-based stats.
Identities = 101/241 (41%), Positives = 149/241 (61%), Gaps = 2/241 (0%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + + P H+ IIMDGNGRWA RG R GHR G E I AA +GIK LT++
Sbjct: 4 IEQIDKTRIPQHVAIIMDGNGRWAKQRGEERTYGHRAGAETVQNITEDAARLGIKYLTLY 63
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
FS NW RP EI+ L+ L+ +++ +L KNNI+ VIG+ L ++ L
Sbjct: 64 TFSTENWNRPQDEIAALMNLLLESIEEE--TLMKNNIRFNVIGDFKKLPVEVQKSLTSCI 121
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T N+G+ + +A +YSSR EI+ A++ I +++G + + I+ +LDT+ +PD
Sbjct: 122 ERTSKNSGMYMVLALSYSSRWEITEAVRQIATQVKTGEISPEQITDECISSHLDTNFMPD 181
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL+IRTGGE RLS++LLWQ AYSE F +WPDF +E + A+ +Y R+RRFG S+
Sbjct: 182 PDLLIRTGGEIRLSNYLLWQCAYSELYFCDTFWPDFDKEELYKAIWEYQQRERRFGKTSE 241
Query: 242 K 242
+
Sbjct: 242 Q 242
>gi|324995990|gb|EGC27901.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sanguinis
SK678]
gi|325697429|gb|EGD39315.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sanguinis
SK160]
Length = 249
Score = 301 bits (771), Expect = 6e-80, Method: Composition-based stats.
Identities = 105/235 (44%), Positives = 145/235 (61%), Gaps = 4/235 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P HI +IMDGNGRWA R PR GH+ G+E ++ AA E+G++ LT++AFS NW
Sbjct: 15 NVPKHIAVIMDGNGRWAKKRMQPRVFGHKAGMETLQKVTIAAKEMGVQVLTVYAFSTENW 74
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+S ++ L F + L KNN+K+++IG+ L L++AE T+LNT
Sbjct: 75 SRPEKEVSFIMNLPVEFYDRYVPELHKNNVKIQMIGDTAKLPKATFEALEKAESLTKLNT 134
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDL 184
GL L A NY R EI++A+K I QD+ + D+ +I YL TS++P DPDL
Sbjct: 135 GLILNFALNYGGRYEINQAVKLIAQDVLDAKLSPGDITEEVIGNYLYTSNLPKMLRDPDL 194
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE RLS+FL WQ AYSE F WPDF + A+ +Y+ R+RRFGG+
Sbjct: 195 VIRTSGELRLSNFLPWQSAYSELYFTDILWPDFDEKALKAAIAEYSRRNRRFGGV 249
>gi|291524865|emb|CBK90452.1| undecaprenyl diphosphate synthase [Eubacterium rectale DSM 17629]
Length = 241
Score = 301 bits (771), Expect = 6e-80, Method: Composition-based stats.
Identities = 112/233 (48%), Positives = 163/233 (69%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P+HI II+DGNGRWA ++G+PR GH G + I AA ++G+K LT++AFS NW
Sbjct: 2 STPEHIAIILDGNGRWAKSKGMPRNYGHTVGAKNVENICKAANDLGVKYLTLYAFSTENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP SE++ L+KL++S+LK + KNN++VRVIG L ++ ++ E+ + +NT
Sbjct: 62 NRPESEVAALMKLLESYLKNCIKTANKNNMRVRVIGEISRLSENFQEKIRNLEEVSSVNT 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GLNL IA NY SRDE+ RA+K++ D ++G++ + D+D+ + YLDT ++PDPDL+IRT
Sbjct: 122 GLNLTIAINYGSRDEMIRAVKHMIADHDAGNLSADDIDADTFSSYLDTKELPDPDLLIRT 181
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
GE+RLS++LLWQ+AY+EF F WP F + A++ YN RDRRFGGL +
Sbjct: 182 SGEQRLSNYLLWQLAYAEFYFTDVPWPAFDKNELKKAIDAYNKRDRRFGGLKE 234
>gi|317498944|ref|ZP_07957227.1| di-trans,poly-cis-decaprenylcistransferase [Lachnospiraceae
bacterium 5_1_63FAA]
gi|316893777|gb|EFV15976.1| di-trans,poly-cis-decaprenylcistransferase [Lachnospiraceae
bacterium 5_1_63FAA]
Length = 235
Score = 301 bits (771), Expect = 6e-80, Method: Composition-based stats.
Identities = 111/235 (47%), Positives = 162/235 (68%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M + + P H+ II+DGNGRWA R LPR GHR+G +V +I+ A ++GIK LT++AFS
Sbjct: 1 MENLNIPQHVAIILDGNGRWAKKRHLPRNMGHRQGSKVVEQIIEDAHDLGIKYLTVYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E++ L+KL++ +LK KNN+KVRVIG+ L +D+ + E E +
Sbjct: 61 TENWKRPQDEVNALMKLLRDYLKTCIKRANKNNMKVRVIGDITGLSEDLQEKIVELEKAS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NTG+N IA NY SRDE+ RA++++ D+ SG++ ++ + YLDT ++PDPDL
Sbjct: 121 KDNTGINFTIALNYGSRDEMVRAMRHMADDLSSGNLSKDEITEEVFNGYLDTKELPDPDL 180
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE+RLS+F+LWQ+AY+EF F WPDF+++ A+ YN RDRRFGG+
Sbjct: 181 MIRTSGEERLSNFMLWQLAYTEFYFTDVLWPDFNKKELIKAIEYYNGRDRRFGGI 235
>gi|291558580|emb|CBL37380.1| undecaprenyl diphosphate synthase [butyrate-producing bacterium
SSC/2]
Length = 235
Score = 301 bits (771), Expect = 6e-80, Method: Composition-based stats.
Identities = 111/235 (47%), Positives = 162/235 (68%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M + + P H+ II+DGNGRWA R LPR GHR+G +V +I+ A ++GIK LT++AFS
Sbjct: 1 MENLNIPQHVAIILDGNGRWAKKRHLPRNMGHRQGSKVVEKIIEDAHDLGIKYLTVYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E++ L+KL++ +LK KNN+KVRVIG+ L +D+ + E E +
Sbjct: 61 TENWKRPQDEVNALMKLLRDYLKTCIKRANKNNMKVRVIGDITGLSEDLQEKIVELEKAS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NTG+N IA NY SRDE+ RA++++ D+ SG++ ++ + YLDT ++PDPDL
Sbjct: 121 KDNTGINFTIALNYGSRDEMVRAMRHMADDLSSGNLSKDEITEEVFNGYLDTKELPDPDL 180
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE+RLS+F+LWQ+AY+EF F WPDF+++ A+ YN RDRRFGG+
Sbjct: 181 MIRTSGEERLSNFMLWQLAYTEFYFTDVLWPDFNKKELIKAIEYYNGRDRRFGGI 235
>gi|311748727|ref|ZP_07722512.1| di-trans,poly-cis-decaprenylcistransferase [Algoriphagus sp. PR1]
gi|311302829|gb|EFQ79267.1| di-trans,poly-cis-decaprenylcistransferase [Algoriphagus sp. PR1]
Length = 245
Score = 301 bits (771), Expect = 6e-80, Method: Composition-based stats.
Identities = 97/242 (40%), Positives = 143/242 (59%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + + P HI IIMDGNGRWA +G R GH I+ + + A +G+K LT+
Sbjct: 1 MKEELDPNRIPRHIAIIMDGNGRWAKKKGAMRIFGHHHAIKAVRDAIEGANNLGVKYLTL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
F+FS NW RP E+ L+ L+ + + KNNI + IG+ SL + LKEA
Sbjct: 61 FSFSTENWSRPKEEVEGLMALLVKTIANEVPMMMKNNIVMDSIGDIDSLPETAYKQLKEA 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+++T NTGL L +A +YS + E+++A + I Q + G + D+ + A +L+T D+P
Sbjct: 121 KEKTASNTGLKLILALSYSGQWELTQAARRIAQKVSDGKLKVDDISQEVFANHLETKDIP 180
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DP+L+IRT GE R+S+FLLWQ+AY+E F P WPDF + A+ Y R+RRFG
Sbjct: 181 DPELMIRTSGEFRISNFLLWQLAYTELHFTPVLWPDFREKHLVAAILDYQKRERRFGKTG 240
Query: 241 KK 242
++
Sbjct: 241 EQ 242
>gi|324992480|gb|EGC24401.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sanguinis
SK405]
gi|327472433|gb|EGF17864.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sanguinis
SK408]
Length = 249
Score = 301 bits (770), Expect = 6e-80, Method: Composition-based stats.
Identities = 105/235 (44%), Positives = 145/235 (61%), Gaps = 4/235 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P HI +IMDGNGRWA R PR GH+ G+E + AA E+G++ LT++AFS NW
Sbjct: 15 NVPKHIAVIMDGNGRWAKKRMQPRVFGHKAGMETLQRVTIAAKEMGVQVLTVYAFSTENW 74
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+S ++ L F + L KNN+K+++IG+ L + L++AE T+LNT
Sbjct: 75 SRPEKEVSFIMNLPVEFYDRYVPELHKNNVKIQMIGDTAKLPEATFEALEKAESLTKLNT 134
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDL 184
GL L A NY R EI++A+K I QD+ + D+ +I YL TS++P DPDL
Sbjct: 135 GLILNFALNYGGRYEINQAVKLIAQDVLDAKLSPGDITEEVIGNYLYTSNLPKMLRDPDL 194
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE RLS+FL WQ AYSE F WPDF + A+ +Y+ R+RRFGG+
Sbjct: 195 VIRTSGELRLSNFLPWQSAYSELYFTDILWPDFDEKALKAAIAEYSRRNRRFGGV 249
>gi|172036264|ref|YP_001802765.1| undecaprenyl pyrophosphate synthase [Cyanothece sp. ATCC 51142]
gi|171697718|gb|ACB50699.1| undecaprenyl pyrophosphate synthetase [Cyanothece sp. ATCC 51142]
Length = 253
Score = 301 bits (770), Expect = 6e-80, Method: Composition-based stats.
Identities = 91/241 (37%), Positives = 139/241 (57%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + P HI +IMDGNGRWA RGLPR GH++G++ +++ + GI LT
Sbjct: 12 LPTDLDQTRLPQHIAVIMDGNGRWAKRRGLPRIMGHQRGVDTLKDLLRCCRDWGIPALTA 71
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP+ E+ L+ L + L++ + N+++R +G L + + +
Sbjct: 72 YAFSTENWGRPLEEVEFLMTLFERVLRRELQEMMTENVRIRFVGALDVLPPSLQLEIYRS 131
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ T NTG+ +A NY R EI ++ + I Q ++ G + D++ +L +L T +P
Sbjct: 132 MEDTENNTGVQFTVATNYGGRQEIVQSCRAIAQQVKQGLLNLDDINETLFENFLYTKGIP 191
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GE RLS+FLLWQ+AY+E WPDF R + AL Y R+RRFG +
Sbjct: 192 DPDLLIRTSGEMRLSNFLLWQLAYAEIYVTQTLWPDFDRHILRDALLNYQQRERRFGKVG 251
Query: 241 K 241
K
Sbjct: 252 K 252
>gi|317129172|ref|YP_004095454.1| undecaprenyl diphosphate synthase [Bacillus cellulosilyticus DSM
2522]
gi|315474120|gb|ADU30723.1| undecaprenyl diphosphate synthase [Bacillus cellulosilyticus DSM
2522]
Length = 256
Score = 301 bits (770), Expect = 7e-80, Method: Composition-based stats.
Identities = 111/238 (46%), Positives = 148/238 (62%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
V + + P HI IIMDGNGRWA RGLPR AGHR+G+ V +IV A +G++ LT++
Sbjct: 19 VDEIDKDNIPKHIAIIMDGNGRWAKKRGLPRIAGHREGMNVVRKIVKHANHLGVEVLTLY 78
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E+ L++L + FL K L K N+KVR+ G + +L L + +A
Sbjct: 79 AFSTENWKRPKGEVDFLMRLPELFLNKELPELIKENVKVRLTGTKENLPIHTLRAIDKAI 138
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T N GL L A NY SR EI A+K ++ I++ D+ +AKYL TS++ D
Sbjct: 139 KDTEDNNGLILNFALNYGSRSEIIEAVKKLYSTIDNEGTSIDDITEESLAKYLMTSELDD 198
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDL+IRT GE RLS+F+LWQ+AY+EF F WPDFS E A+ Y R RR+GGL
Sbjct: 199 PDLLIRTSGEIRLSNFMLWQLAYTEFWFTEVLWPDFSEESLEEAIRVYQNRARRYGGL 256
>gi|301169638|emb|CBW29239.1| undecaprenyl pyrophosphate synthase [Haemophilus influenzae 10810]
Length = 236
Score = 301 bits (770), Expect = 7e-80, Method: Composition-based stats.
Identities = 95/236 (40%), Positives = 138/236 (58%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M ++ P H+ IIMDGNGRWA + R GH G+ + VA A ++G++ LT++AFS
Sbjct: 1 MDQTNIPKHVAIIMDGNGRWAKQKNKMRIFGHTYGVTAVRKAVAYARQIGVEVLTLYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP EIS L+ L L + L KNNI +++IG+ + + +K+AE+ T
Sbjct: 61 SENWSRPEQEISALMSLFMQALDREVKKLHKNNICLKIIGDVSRFSETLQEKIKKAENLT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NT L L IA NY +I +A K I + ++ + D+++S +L T + P DL
Sbjct: 121 EKNTALTLNIAANYGGCWDIIQAAKQIAEKVKKEEMSVSDINNSTFQHHLATQNAPPVDL 180
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
+IRT GE+R+S+FLLWQ+AY+E F WPDF++ F A+ Y R RRFGG
Sbjct: 181 LIRTSGEQRISNFLLWQIAYAELYFSDVLWPDFNQLEFNRAIASYQQRHRRFGGTE 236
>gi|153954046|ref|YP_001394811.1| undecaprenyl pyrophosphate synthase [Clostridium kluyveri DSM 555]
gi|146346927|gb|EDK33463.1| UppS1 [Clostridium kluyveri DSM 555]
Length = 254
Score = 301 bits (770), Expect = 7e-80, Method: Composition-based stats.
Identities = 107/235 (45%), Positives = 145/235 (61%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ ++ P HI IIMDGNGRWA R LPR GH+ G+E EIV + + +K LT++AFS
Sbjct: 20 IDLNNIPSHIAIIMDGNGRWAKKRNLPRVMGHKAGVEAIREIVKECSNLKVKYLTLYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+S L+ L+ +L++ F L NN+ + IGN L L + T
Sbjct: 80 TENWKRPKEEVSSLMNLLVEYLRREFKELNDNNVVINYIGNIHKLPSLCEKELITSNKNT 139
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NTGLNL +A NY RDEI RA K +++DI+SG + ++ ++ YL T ++PDPDL
Sbjct: 140 KNNTGLNLNLALNYGGRDEIVRAFKLMYEDIKSGKISKDNITEDTLSGYLYTKNMPDPDL 199
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IIR GE+RLS+FLLWQ AYSEF + WPDF A+ Y RDRRFG +
Sbjct: 200 IIRPSGEQRLSNFLLWQCAYSEFWYSDINWPDFKVWHLHKAILDYQNRDRRFGTV 254
>gi|282880534|ref|ZP_06289241.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella timonensis
CRIS 5C-B1]
gi|281305637|gb|EFA97690.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella timonensis
CRIS 5C-B1]
Length = 253
Score = 301 bits (770), Expect = 7e-80, Method: Composition-based stats.
Identities = 105/242 (43%), Positives = 153/242 (63%), Gaps = 2/242 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + + P HI IIMDGNGRWAA RGL R GH+ G+E I AA ++G+K LT+
Sbjct: 1 MNHELDKTRIPAHIAIIMDGNGRWAAKRGLERSYGHQAGVETVRRITAACTKLGVKYLTL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW RP EIS L+ L+ S L+ KN+++ RVIG+ L D+ L E
Sbjct: 61 YTFSTENWNRPSDEISALMGLVLSSLEDEI--FMKNDVRFRVIGDIARLPADVQKKLHET 118
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E+ T+ N + + +A +YSSR EI++A+++I D+++G + +++KYL T+ +P
Sbjct: 119 EEHTKDNATMTMVVALSYSSRWEITKAVQDIVTDVKAGKTSEQAICEDMVSKYLQTAFMP 178
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRTGGE R+S++LLWQ+AYSE F +WPDF+ E + A+ Y R RRFG
Sbjct: 179 DPDLLIRTGGEVRVSNYLLWQIAYSELYFCDTFWPDFAEEDLYRAIANYQSRQRRFGKTE 238
Query: 241 KK 242
++
Sbjct: 239 QQ 240
>gi|320547756|ref|ZP_08042040.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus equinus
ATCC 9812]
gi|320447516|gb|EFW88275.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus equinus
ATCC 9812]
Length = 251
Score = 301 bits (770), Expect = 7e-80, Method: Composition-based stats.
Identities = 109/235 (46%), Positives = 147/235 (62%), Gaps = 4/235 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P+HIGIIMDGNGRWA R PR GH+ G++ ++ AA+E+G+K LT++AFS NW
Sbjct: 17 KIPNHIGIIMDGNGRWAKKRMQPRVMGHKAGMDALQDVTIAASELGVKVLTVYAFSTENW 76
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+ ++ L F K L +NN++V+VIG L D +K A DQT+ N+
Sbjct: 77 SRPEDEVKFIMNLPVEFFDKYVPQLDENNVRVQVIGETNRLPKDTYDAMKRACDQTKHNS 136
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDL 184
GL L A NY R EI+ A+KNI Q++ + D+ +I+ +L T+ +P DPDL
Sbjct: 137 GLILNFALNYGGRSEITEAVKNIAQEVLEAKISPDDITEDVISNHLMTNHLPYLYRDPDL 196
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IIRT GE RLS+FL WQ AYSEF F P WPDF ++ A+ +YN R RRFGG+
Sbjct: 197 IIRTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKDELIKAIAEYNQRHRRFGGI 251
>gi|46907541|ref|YP_013930.1| undecaprenyl pyrophosphate synthase [Listeria monocytogenes
serotype 4b str. F2365]
gi|226223916|ref|YP_002758023.1| undecaprenyl diphosphate synthase [Listeria monocytogenes
Clip81459]
gi|254824626|ref|ZP_05229627.1| undecaprenyl diphosphate synthase [Listeria monocytogenes FSL
J1-194]
gi|254852634|ref|ZP_05241982.1| undecaprenyl diphosphate synthase [Listeria monocytogenes FSL
R2-503]
gi|254932370|ref|ZP_05265729.1| undecaprenyl diphosphate synthase [Listeria monocytogenes HPB2262]
gi|254992873|ref|ZP_05275063.1| undecaprenyl diphosphate synthase [Listeria monocytogenes FSL
J2-064]
gi|300765445|ref|ZP_07075427.1| undecaprenyl diphosphate synthase [Listeria monocytogenes FSL
N1-017]
gi|73920268|sp|Q720A7|UPPS_LISMF RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|46880809|gb|AAT04107.1| undecaprenyl diphosphate synthase [Listeria monocytogenes serotype
4b str. F2365]
gi|225876378|emb|CAS05087.1| Putative undecaprenyl diphosphate synthase [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|258605950|gb|EEW18558.1| undecaprenyl diphosphate synthase [Listeria monocytogenes FSL
R2-503]
gi|293583926|gb|EFF95958.1| undecaprenyl diphosphate synthase [Listeria monocytogenes HPB2262]
gi|293593864|gb|EFG01625.1| undecaprenyl diphosphate synthase [Listeria monocytogenes FSL
J1-194]
gi|300513882|gb|EFK40947.1| undecaprenyl diphosphate synthase [Listeria monocytogenes FSL
N1-017]
gi|328475038|gb|EGF45826.1| undecaprenyl pyrophosphate synthase [Listeria monocytogenes 220]
Length = 252
Score = 301 bits (770), Expect = 7e-80, Method: Composition-based stats.
Identities = 101/231 (43%), Positives = 140/231 (60%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ IIMDGNGRWA R LPR AGH++G++V + A +GI LT++AFS NW
Sbjct: 22 PIPRHVAIIMDGNGRWAKKRFLPRIAGHKEGMDVVKRVTRYANAIGIDVLTLYAFSTENW 81
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP E+ L+KL F L + N++V V+G R +L + + +++A T T
Sbjct: 82 KRPTDEVDFLMKLPVEFFDSFVPELIEENVRVNVMGYRENLPNHTMRAVEKAIADTAHCT 141
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL L A NY R EI A K +++E + D+ + +L +S + DPDL+IRT
Sbjct: 142 GLTLNFALNYGGRSEIITAAKEAMKELELEGKSADDLTEEKLNDHLMSSGLGDPDLLIRT 201
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE RLS+F+LWQ+AYSEF F +WPDFS+E F A+ +Y R RRFGGL
Sbjct: 202 SGELRLSNFMLWQLAYSEFYFTDTHWPDFSKEDFLQAIIEYQNRSRRFGGL 252
>gi|323350537|ref|ZP_08086199.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sanguinis
VMC66]
gi|322123219|gb|EFX94904.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sanguinis
VMC66]
Length = 249
Score = 301 bits (770), Expect = 7e-80, Method: Composition-based stats.
Identities = 105/235 (44%), Positives = 144/235 (61%), Gaps = 4/235 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P HI +IMDGNGRWA R PR GH+ G+E + AA E+G++ LT++AFS NW
Sbjct: 15 NVPKHIAVIMDGNGRWAKKRMQPRVFGHKAGMETLQRVTIAAKEMGVQVLTVYAFSTENW 74
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+S ++ L F + L KNN+K+++IG+ L L++AE T+LNT
Sbjct: 75 SRPEKEVSFIMNLPVEFYDRYVPELHKNNVKIQMIGDTAKLPKATFEALEKAESLTKLNT 134
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDL 184
GL L A NY R EI++A+K I QD+ + D+ +I YL TS++P DPDL
Sbjct: 135 GLILNFALNYGGRYEINQAVKEIAQDVLDAKLSPGDITEDIIGNYLYTSNLPKMLRDPDL 194
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE RLS+FL WQ AYSE F WPDF + A+ +Y+ R+RRFGG+
Sbjct: 195 VIRTSGELRLSNFLPWQSAYSELYFTDILWPDFDEKALKAAIAEYSRRNRRFGGV 249
>gi|195978864|ref|YP_002124108.1| undecaprenyl pyrophosphate synthetase UppS [Streptococcus equi
subsp. zooepidemicus MGCS10565]
gi|195975569|gb|ACG63095.1| undecaprenyl pyrophosphate synthetase UppS [Streptococcus equi
subsp. zooepidemicus MGCS10565]
Length = 249
Score = 301 bits (770), Expect = 8e-80, Method: Composition-based stats.
Identities = 112/240 (46%), Positives = 142/240 (59%), Gaps = 4/240 (1%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ P HIGIIMDGNGRWA R PR GH+ G++ E+ AA+++G+K LT++AF
Sbjct: 10 KIVLDRIPKHIGIIMDGNGRWAKKRLKPRVFGHKAGMDALQEVTIAASDLGVKVLTVYAF 69
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP E+S ++ L F K L KNN+KV++IG L D L L+ A +
Sbjct: 70 STENWSRPQDEVSFIMNLPVEFFDKYVPELHKNNVKVQMIGETNRLPKDTLKALEAAIAK 129
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP--- 180
TR NTGL L A NY R EI+ A+ I QD+ + D+ LIA YL T +P
Sbjct: 130 TRQNTGLILNFALNYGGRAEITNAVGLIAQDVLDAKLNPGDITEDLIANYLMTDHLPYLY 189
Query: 181 -DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDLIIRT GE RLS+F+ WQ AYSE F P WPDF R A+ YN R RRFG +
Sbjct: 190 RDPDLIIRTSGELRLSNFMPWQSAYSELYFTPVLWPDFKRAELIKAIEDYNHRHRRFGAI 249
>gi|172057856|ref|YP_001814316.1| undecaprenyl diphosphate synthase [Exiguobacterium sibiricum
255-15]
gi|171990377|gb|ACB61299.1| undecaprenyl diphosphate synthase [Exiguobacterium sibiricum
255-15]
Length = 245
Score = 301 bits (770), Expect = 8e-80, Method: Composition-based stats.
Identities = 105/236 (44%), Positives = 147/236 (62%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ P+HI IIMDGNGRWA RGLPR GHR+G++ E+V A E+G+K+LT++AF
Sbjct: 10 EVIEQQVPEHIAIIMDGNGRWAKKRGLPRIMGHREGMKSVREVVRTANELGVKSLTLYAF 69
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP E+S L+KL FL+ L + N+KV V G L +++A+
Sbjct: 70 STENWTRPEEEVSFLMKLPAQFLESDLKDLNERNVKVEVAGEVSRLPIYTREAVQQAKTD 129
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NTGL L A NY RDEI + ++ I + +++G + + + +I + L T + D D
Sbjct: 130 TANNTGLRLIFALNYGGRDEIVQVMQKIAEKVQAGLLQPDMITNEIIEQELMTGSMTDVD 189
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
L+IRT GE+RLS+FLLWQ AY+EF F WP+F R+ F A+ YN R RRFGG+
Sbjct: 190 LVIRTSGEQRLSNFLLWQAAYAEFYFTDVLWPEFRRDQFLAAIEDYNQRTRRFGGV 245
>gi|324989753|gb|EGC21696.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sanguinis
SK353]
gi|328944575|gb|EGG38736.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sanguinis
SK1087]
Length = 249
Score = 301 bits (770), Expect = 8e-80, Method: Composition-based stats.
Identities = 105/235 (44%), Positives = 145/235 (61%), Gaps = 4/235 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P HI +IMDGNGRWA R PR GH+ G+E ++ AA E+G++ LT++AFS NW
Sbjct: 15 NVPKHIAVIMDGNGRWAKKRMQPRVFGHKAGMETLQKVTIAAKEMGVQVLTVYAFSTENW 74
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+S ++ L F + L KNN+K+++IG+ L L++AE T+LNT
Sbjct: 75 SRPEKEVSFIMNLPVEFYDRYVPELHKNNVKIQMIGDTAKLPKATFEALEKAESLTKLNT 134
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDL 184
GL L A NY R EI++A+K I QD+ + D+ +I YL TS++P DPDL
Sbjct: 135 GLILNFALNYGGRCEINQAVKLIAQDVLDAKLSPGDITEEVIGNYLYTSNLPKMLRDPDL 194
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE RLS+FL WQ AYSE F WPDF + A+ +Y+ R+RRFGG+
Sbjct: 195 VIRTSGELRLSNFLPWQSAYSELYFTDILWPDFDEKALKAAIAEYSRRNRRFGGV 249
>gi|67922228|ref|ZP_00515742.1| Di-trans-poly-cis-decaprenylcistransferase [Crocosphaera watsonii
WH 8501]
gi|67855931|gb|EAM51176.1| Di-trans-poly-cis-decaprenylcistransferase [Crocosphaera watsonii
WH 8501]
Length = 283
Score = 301 bits (770), Expect = 8e-80, Method: Composition-based stats.
Identities = 91/241 (37%), Positives = 141/241 (58%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + + P HI +IMDGNGRWA RGLPR GH++G++ +++ ++ GI LT
Sbjct: 42 LPSDLDPNRFPQHIAVIMDGNGRWAKRRGLPRIMGHQRGVDTLKDVLRCCSDWGISALTA 101
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP+ E+ L+ L + L++ + N+++R +G+ L + + +
Sbjct: 102 YAFSTENWGRPLEEVDFLMTLFERVLRRELEEMMTENVRIRFVGDLDVLSPSLQAEISRS 161
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ T NTG+ +A NY R EI ++ + I Q ++ G + D++ SL +L T +P
Sbjct: 162 MEDTENNTGVQFTVATNYGGRQEIVQSCRAIAQQVKQGLLNLDDINESLFENFLYTKGIP 221
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GE R+S+FLLWQ+AY+E WPDF R AL Y R+RRFG +
Sbjct: 222 DPDLLIRTSGEMRISNFLLWQLAYAEIYVTQTLWPDFDRHTLHDALLNYQQRERRFGKVG 281
Query: 241 K 241
K
Sbjct: 282 K 282
>gi|322411034|gb|EFY01942.1| putative undecaprenyl pyrophosphate synthetase [Streptococcus
dysgalactiae subsp. dysgalactiae ATCC 27957]
Length = 249
Score = 300 bits (769), Expect = 9e-80, Method: Composition-based stats.
Identities = 112/235 (47%), Positives = 143/235 (60%), Gaps = 4/235 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HIGIIMDGNGRWA R PR GH+ G++ ++ AA+++G+K LT++AFS NW
Sbjct: 15 KIPKHIGIIMDGNGRWAKKRLKPRVFGHKAGMDALQDVTIAASDLGVKVLTVYAFSTENW 74
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+S ++ L F K +L KNN+KV++IG L D L L A D+T+ NT
Sbjct: 75 SRPQDEVSFIMNLPVEFFDKYVPTLHKNNVKVQMIGETHRLPVDTLTALNAAIDKTKRNT 134
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDL 184
GL L A NY R EI+ A++ I QD+ + D+ LIA YL T +P DPDL
Sbjct: 135 GLILNFALNYGGRAEITSAVRLIAQDVLDAKLNPGDITEDLIANYLMTDHLPYLYRDPDL 194
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IIRT GE RLS+FL WQ AYSEF F P WPDF + A+ YN R RRFG +
Sbjct: 195 IIRTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKAELLKAIADYNRRQRRFGKV 249
>gi|219854659|ref|YP_002471781.1| hypothetical protein CKR_1316 [Clostridium kluyveri NBRC 12016]
gi|219568383|dbj|BAH06367.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 260
Score = 300 bits (769), Expect = 9e-80, Method: Composition-based stats.
Identities = 107/235 (45%), Positives = 145/235 (61%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ ++ P HI IIMDGNGRWA R LPR GH+ G+E EIV + + +K LT++AFS
Sbjct: 26 IDLNNIPSHIAIIMDGNGRWAKKRNLPRVMGHKAGVEAIREIVKECSNLKVKYLTLYAFS 85
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+S L+ L+ +L++ F L NN+ + IGN L L + T
Sbjct: 86 TENWKRPKEEVSSLMNLLVEYLRREFKELNDNNVVINYIGNIHKLPSLCEKELITSNKNT 145
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NTGLNL +A NY RDEI RA K +++DI+SG + ++ ++ YL T ++PDPDL
Sbjct: 146 KNNTGLNLNLALNYGGRDEIVRAFKLMYEDIKSGKISKDNITEDTLSGYLYTKNMPDPDL 205
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IIR GE+RLS+FLLWQ AYSEF + WPDF A+ Y RDRRFG +
Sbjct: 206 IIRPSGEQRLSNFLLWQCAYSEFWYSDINWPDFKVWHLHKAILDYQNRDRRFGTV 260
>gi|325688972|gb|EGD30980.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sanguinis
SK115]
gi|332365118|gb|EGJ42881.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sanguinis
SK1059]
Length = 249
Score = 300 bits (769), Expect = 9e-80, Method: Composition-based stats.
Identities = 105/235 (44%), Positives = 144/235 (61%), Gaps = 4/235 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P HI +IMDGNGRWA R PR GH+ G+E + AA E+G++ LT++AFS NW
Sbjct: 15 NVPKHIAVIMDGNGRWAKKRMQPRVFGHKAGMETLQRVTIAAKEMGVQVLTVYAFSTENW 74
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+S ++ L F + L KNN+K+++IG+ L L++AE T+LNT
Sbjct: 75 SRPEKEVSFIMNLPVEFYDRYVPELHKNNVKIQMIGDTAKLPKATFEALEKAESLTKLNT 134
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDL 184
GL L A NY R EI++A+K I QD+ + D+ +I YL TS++P DPDL
Sbjct: 135 GLILNFALNYGGRYEINQAVKLIAQDVLDAKLSPGDITEEVIGNYLYTSNLPKMLRDPDL 194
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE RLS+FL WQ AYSE F WPDF + A+ +Y+ R+RRFGG+
Sbjct: 195 VIRTSGELRLSNFLPWQSAYSELYFTDILWPDFDEKALKAAIAEYSRRNRRFGGV 249
>gi|329122934|ref|ZP_08251505.1| di-trans,poly-cis-decaprenylcistransferase [Haemophilus aegyptius
ATCC 11116]
gi|327471865|gb|EGF17305.1| di-trans,poly-cis-decaprenylcistransferase [Haemophilus aegyptius
ATCC 11116]
Length = 239
Score = 300 bits (769), Expect = 9e-80, Method: Composition-based stats.
Identities = 95/237 (40%), Positives = 139/237 (58%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ ++ P H+ IIMDGNGRWA + R GH G+ + VA A ++G++ LT++AF
Sbjct: 3 ELDQTNIPKHVAIIMDGNGRWAKQKNKMRIFGHTNGVTAVRKAVAYARQIGVEVLTLYAF 62
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP EIS L+ L L + L KNNI +++IG+ + + +K+AE+
Sbjct: 63 SSENWSRPEQEISALMSLFMQALDREVKKLHKNNICLKIIGDVSRFSETLQEKIKKAENL 122
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NT L L IA NY +I +A K I + ++ + D+++S +L T + P D
Sbjct: 123 TEKNTALTLNIAANYGGCWDIIQAAKQIAEKVKKEEMSVSDINNSTFQHHLATQNAPPVD 182
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
L+IRT GE+R+S+FLLWQ+AY+E F WPDF++ F HA+ Y R RRFGG
Sbjct: 183 LLIRTSGEQRISNFLLWQIAYAELYFSDVLWPDFNQLEFNHAIASYQQRHRRFGGTE 239
>gi|261207395|ref|ZP_05922081.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium TC 6]
gi|289566683|ref|ZP_06447100.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
D344SRF]
gi|260078286|gb|EEW65991.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium TC 6]
gi|289161542|gb|EFD09425.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
D344SRF]
Length = 270
Score = 300 bits (769), Expect = 9e-80, Method: Composition-based stats.
Identities = 105/238 (44%), Positives = 147/238 (61%), Gaps = 4/238 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
P HI IIMDGNGRWA R LPR AGH++G+E ++ A+ +G++ LT++AFS N
Sbjct: 24 GPIPQHIAIIMDGNGRWAQNRRLPRVAGHKEGMETVKKVTKKASRLGVRVLTLYAFSTEN 83
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W+RP E+S L++L F L K N+KV V+G L + ++ A +QT+ N
Sbjct: 84 WKRPKDEVSFLMQLPVDFFDTFVPELIKENVKVHVMGYENVLPEHTQDAVRRAIEQTKNN 143
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPD 183
TG+ L A NY SR EI A++ I +++ G + + ++D LIAK+L T +P DP+
Sbjct: 144 TGMVLNFALNYGSRAEIVTAVQEIAEEVAKGEIHAEEIDDELIAKHLMTGFLPKELQDPE 203
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
L+IRT GE+R+S+FLLWQ+AYSE F WPDF A+ Y RDRRFGG+ K
Sbjct: 204 LMIRTSGEERISNFLLWQIAYSELYFTKALWPDFDGAHLEEAIASYQNRDRRFGGVKK 261
>gi|332311758|gb|EGJ24853.1| Undecaprenyl pyrophosphate synthase [Listeria monocytogenes str.
Scott A]
Length = 253
Score = 300 bits (769), Expect = 9e-80, Method: Composition-based stats.
Identities = 101/231 (43%), Positives = 140/231 (60%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ IIMDGNGRWA R LPR AGH++G++V + A +GI LT++AFS NW
Sbjct: 23 PIPRHVAIIMDGNGRWAKKRFLPRIAGHKEGMDVVKRVTRYANAIGIDVLTLYAFSTENW 82
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP E+ L+KL F L + N++V V+G R +L + + +++A T T
Sbjct: 83 KRPTDEVDFLMKLPVEFFDSFVPELIEENVRVNVMGYRENLPNHTMRAVEKAIADTAHCT 142
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL L A NY R EI A K +++E + D+ + +L +S + DPDL+IRT
Sbjct: 143 GLTLNFALNYGGRSEIITAAKEAMKELELEGKSADDLTEEKLNDHLMSSGLGDPDLLIRT 202
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE RLS+F+LWQ+AYSEF F +WPDFS+E F A+ +Y R RRFGGL
Sbjct: 203 SGELRLSNFMLWQLAYSEFYFTDTHWPDFSKEDFLQAIIEYQNRSRRFGGL 253
>gi|312135565|ref|YP_004002903.1| undecaprenyl diphosphate synthase [Caldicellulosiruptor owensensis
OL]
gi|311775616|gb|ADQ05103.1| undecaprenyl diphosphate synthase [Caldicellulosiruptor owensensis
OL]
Length = 248
Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats.
Identities = 115/232 (49%), Positives = 149/232 (64%), Gaps = 1/232 (0%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI IIMDGNGRWA RGLPR AGHR G + EIV A E+G+K LT++AFS NW+
Sbjct: 17 MPQHIAIIMDGNGRWAKKRGLPRSAGHRFGAQKLKEIVLFADEIGLKYLTVYAFSTENWK 76
Query: 70 RPVSEISELVKLIKSFLKKGFYSL-KKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+ L+ L++ F +L KK I+++VIG+ LD DI + AE +T+
Sbjct: 77 RPKDEVENLMNLLREFFDTEIENLIKKTQIRIKVIGDISKLDKDIQERIISAEGRTKDKR 136
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL + IA NY R EI A+KN+ DI++G + DVD L KYL T D+PDPDL+IR
Sbjct: 137 GLCVVIALNYGGRQEIINAVKNLALDIKNGKIDIEDVDEELFKKYLYTYDIPDPDLLIRP 196
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
GE R+S+FLLWQ++Y+EF F WPDF +E A+ Y RDRRFGG+
Sbjct: 197 SGEMRVSNFLLWQISYTEFWFSNVLWPDFKKEHLLKAIEDYQKRDRRFGGVK 248
>gi|297617175|ref|YP_003702334.1| undecaprenyl diphosphate synthase [Syntrophothermus lipocalidus DSM
12680]
gi|297145012|gb|ADI01769.1| undecaprenyl diphosphate synthase [Syntrophothermus lipocalidus DSM
12680]
Length = 249
Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats.
Identities = 100/240 (41%), Positives = 143/240 (59%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + + P HI IIMDGNGRWA R PR GHR G+E V A +E+G+ LT++
Sbjct: 6 LYELDFTRIPQHIAIIMDGNGRWARKRLRPRSFGHRAGMESLKRTVEACSELGVHILTVY 65
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E+S L+ L+ +L + +L + N+ + +IG LD I L+ A
Sbjct: 66 AFSTENWKRPAEEVSALMNLLLEYLNRELENLHEKNVCITIIGITDQLDPAIQRELQRAV 125
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ T N GL L I NY +R E+ A + + + + G + D+ +++ YL TS +PD
Sbjct: 126 ELTAGNDGLILNIGLNYGARAELVMAARRLAERVRDGEIDVADISEEMMSSYLCTSHLPD 185
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL+IRTGGE RLS+FLLWQ AY+E F WPDF+++ A+ Y RDRRFG + +
Sbjct: 186 PDLLIRTGGEMRLSNFLLWQAAYAELWFTDTLWPDFTKDDLVKAIIDYQRRDRRFGTIKE 245
>gi|145636947|ref|ZP_01792611.1| hypothetical protein CGSHiHH_04575 [Haemophilus influenzae PittHH]
gi|145269805|gb|EDK09744.1| hypothetical protein CGSHiHH_04575 [Haemophilus influenzae PittHH]
Length = 239
Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats.
Identities = 95/237 (40%), Positives = 139/237 (58%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ ++ P H+ IIMDGNGRWA + R GH G+ + VA A ++G++ LT++AF
Sbjct: 3 ELDQTNIPKHVAIIMDGNGRWAKQKNKMRIFGHTNGVTAVRKAVAYARQIGVEVLTLYAF 62
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP EIS L+ L L + L KNNI +++IG+ + + +K+AE+
Sbjct: 63 SSENWSRPEQEISALMSLFMQALDREVKKLHKNNICLKIIGDVSRFSETLQEKIKKAENL 122
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NT L L IA NY R +I +A K I + ++ + D+++S +L T + P D
Sbjct: 123 TEKNTALTLNIAANYGGRWDIIQAAKQIAEKVKKEEMSVSDINNSTFQHHLATQNAPPVD 182
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
L+IRT GE+R+S+FLLWQ+AY+E F WPDF++ F A+ Y R RRFGG
Sbjct: 183 LLIRTSGEQRISNFLLWQIAYAELYFSDVLWPDFNQLEFNRAIASYQQRHRRFGGTE 239
>gi|298492874|ref|YP_003723051.1| undecaprenyl diphosphate synthase ['Nostoc azollae' 0708]
gi|298234792|gb|ADI65928.1| undecaprenyl diphosphate synthase ['Nostoc azollae' 0708]
Length = 249
Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats.
Identities = 87/239 (36%), Positives = 140/239 (58%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + P H+ +IMDGNGRWA ++GLPR GH++G++ +++ + GIK LT
Sbjct: 11 LPSDLKRELLPQHVAVIMDGNGRWAKSQGLPRIMGHKRGVDALKDLLHCCKDWGIKALTA 70
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E+ L+ L + L++ + + N++++ +GN +L + + +
Sbjct: 71 YAFSTENWKRPQEEVEFLMSLFQGVLRQELREMVEENVQIQFVGNLQALPTALQEEISRS 130
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+T+ N + +A NY R EI +A + I Q ++ G + ++ L +L T+ +
Sbjct: 131 MAETKDNRSIKFTVATNYGGRQEILQACRAIAQKVQQGILNPDEISEELFESHLYTAGIT 190
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRT GE RLS+FLLWQ+AY E WPDF R+ F AL Y R+RRFG +
Sbjct: 191 DPDLLIRTSGEMRLSNFLLWQMAYGEIYITETLWPDFDRKEFQRALCAYQQRERRFGKI 249
>gi|68249506|ref|YP_248618.1| undecaprenyl pyrophosphate synthetase [Haemophilus influenzae
86-028NP]
gi|68057705|gb|AAX87958.1| undecaprenyl pyrophosphate synthetase [Haemophilus influenzae
86-028NP]
Length = 239
Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats.
Identities = 95/237 (40%), Positives = 139/237 (58%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ ++ P H+ IIMDGNGRWA + R GH G+ + VA A ++G++ LT++AF
Sbjct: 3 ELDQTNIPKHVAIIMDGNGRWAKQKNKMRIFGHANGVTAVRKAVAYARQIGVEVLTLYAF 62
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP EIS L+ L L + L KNNI +++IG+ + + +K+AE+
Sbjct: 63 SSENWSRPEQEISALMSLFMQALDREVKKLHKNNICLKIIGDVSRFSETLQEKIKKAENL 122
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NT L L IA NY +I +A K I + ++ + D+++S +L T + P D
Sbjct: 123 TEKNTALTLNIAANYGGCWDIIQAAKQIAEKVKKEEMSVSDINNSTFQHHLATQNAPPVD 182
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
L+IRT GE+R+S+FLLWQ+AY+E F WPDF++ F HA+ Y R RRFGG
Sbjct: 183 LLIRTSGEQRISNFLLWQIAYAELYFSDVLWPDFNQLEFNHAIASYQQRHRRFGGTE 239
>gi|238924131|ref|YP_002937647.1| undecaprenyl diphosphate synthase [Eubacterium rectale ATCC 33656]
gi|238875806|gb|ACR75513.1| undecaprenyl diphosphate synthase [Eubacterium rectale ATCC 33656]
gi|291529006|emb|CBK94592.1| undecaprenyl diphosphate synthase [Eubacterium rectale M104/1]
Length = 241
Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats.
Identities = 112/233 (48%), Positives = 161/233 (69%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P+HI II+DGNGRWA ++G+PR GH G + I AA ++G+K LT++AFS NW
Sbjct: 2 STPEHIAIILDGNGRWAKSKGMPRNYGHTVGAKNVENICKAANDLGVKYLTLYAFSTENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP SE++ L+KL++S+LK + KNN++VRVIG L ++ ++ E+ + +NT
Sbjct: 62 NRPESEVAALMKLLESYLKNCIKTANKNNMRVRVIGEISRLSENFQEKIRNLEEVSSVNT 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GLNL IA NY SRDE+ RA+K++ D + G + + D+D+ + YLDT ++PDPDL+IRT
Sbjct: 122 GLNLTIAINYGSRDEMIRAVKHMIADHDDGKLSADDIDADTFSSYLDTRELPDPDLLIRT 181
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
GE+RLS++LLWQ+AY+EF F WP F + A++ YN RDRRFGGL +
Sbjct: 182 SGEQRLSNYLLWQLAYAEFYFTDVPWPAFDKNELKKAIDAYNKRDRRFGGLKE 234
>gi|21282872|ref|NP_645960.1| undecaprenyl pyrophosphate synthase [Staphylococcus aureus subsp.
aureus MW2]
gi|49483423|ref|YP_040647.1| undecaprenyl pyrophosphate synthase [Staphylococcus aureus subsp.
aureus MRSA252]
gi|49486099|ref|YP_043320.1| undecaprenyl pyrophosphate synthase [Staphylococcus aureus subsp.
aureus MSSA476]
gi|57651830|ref|YP_186136.1| undecaprenyl diphosphate synthase [Staphylococcus aureus subsp.
aureus COL]
gi|87160357|ref|YP_493850.1| undecaprenyl diphosphate synthase [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|88194970|ref|YP_499770.1| undecaprenyl pyrophosphate synthase [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|151221382|ref|YP_001332204.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus subsp.
aureus str. Newman]
gi|161509426|ref|YP_001575085.1| undecaprenyl pyrophosphate synthase [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|257425314|ref|ZP_05601739.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257427975|ref|ZP_05604373.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257430608|ref|ZP_05606990.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus subsp.
aureus 68-397]
gi|257433368|ref|ZP_05609726.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus subsp.
aureus E1410]
gi|257436210|ref|ZP_05612257.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus M876]
gi|258452559|ref|ZP_05700565.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus A5948]
gi|262048152|ref|ZP_06021039.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus D30]
gi|262051322|ref|ZP_06023545.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus
930918-3]
gi|282903815|ref|ZP_06311703.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus C160]
gi|282905578|ref|ZP_06313433.1| di-trans poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus Btn1260]
gi|282908553|ref|ZP_06316383.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus WW2703/97]
gi|282910832|ref|ZP_06318635.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus WBG10049]
gi|282914037|ref|ZP_06321824.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus M899]
gi|282916520|ref|ZP_06324278.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus D139]
gi|282918959|ref|ZP_06326694.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus C427]
gi|282920504|ref|ZP_06328225.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
A9765]
gi|282924082|ref|ZP_06331758.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus C101]
gi|283770324|ref|ZP_06343216.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus subsp.
aureus H19]
gi|283958003|ref|ZP_06375454.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus A017934/97]
gi|284024253|ref|ZP_06378651.1| undecaprenyl pyrophosphate synthase [Staphylococcus aureus subsp.
aureus 132]
gi|293501069|ref|ZP_06666920.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus 58-424]
gi|293510031|ref|ZP_06668739.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus M809]
gi|293526617|ref|ZP_06671302.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus M1015]
gi|294848256|ref|ZP_06789003.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
A9754]
gi|295427747|ref|ZP_06820379.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus EMRSA16]
gi|42559993|sp|Q8NWZ5|UPPS_STAAW RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|73920276|sp|Q5HGH1|UPPS_STAAC RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|73920277|sp|Q6GHH5|UPPS_STAAR RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|73920278|sp|Q6G9V3|UPPS_STAAS RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|21204311|dbj|BAB95008.1| undecaprenyl pyrophosphatase synthetase [Staphylococcus aureus
subsp. aureus MW2]
gi|49241552|emb|CAG40238.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus subsp.
aureus MRSA252]
gi|49244542|emb|CAG42971.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus subsp.
aureus MSSA476]
gi|57286016|gb|AAW38110.1| undecaprenyl diphosphate synthase [Staphylococcus aureus subsp.
aureus COL]
gi|87126331|gb|ABD20845.1| undecaprenyl diphosphate synthase [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|87202528|gb|ABD30338.1| undecaprenyl diphosphate synthase [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|150374182|dbj|BAF67442.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus subsp.
aureus str. Newman]
gi|160368235|gb|ABX29206.1| di-trans, poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus USA300_TCH1516]
gi|257271771|gb|EEV03909.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257274816|gb|EEV06303.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257278736|gb|EEV09355.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus subsp.
aureus 68-397]
gi|257281461|gb|EEV11598.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus subsp.
aureus E1410]
gi|257284492|gb|EEV14612.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus M876]
gi|257859777|gb|EEV82619.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus A5948]
gi|259160697|gb|EEW45718.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus
930918-3]
gi|259163718|gb|EEW48273.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus D30]
gi|282314054|gb|EFB44446.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus C101]
gi|282316769|gb|EFB47143.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus C427]
gi|282319007|gb|EFB49359.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus D139]
gi|282322105|gb|EFB52429.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus M899]
gi|282325437|gb|EFB55746.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus WBG10049]
gi|282327615|gb|EFB57898.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus WW2703/97]
gi|282330870|gb|EFB60384.1| di-trans poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus Btn1260]
gi|282594166|gb|EFB99153.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
A9765]
gi|282595433|gb|EFC00397.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus C160]
gi|283460471|gb|EFC07561.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus subsp.
aureus H19]
gi|283470475|emb|CAQ49686.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus ST398]
gi|283790152|gb|EFC28969.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus A017934/97]
gi|290920689|gb|EFD97752.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus M1015]
gi|291096074|gb|EFE26335.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus 58-424]
gi|291466975|gb|EFF09493.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus M809]
gi|294825056|gb|EFG41478.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
A9754]
gi|295128105|gb|EFG57739.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus EMRSA16]
gi|298694552|gb|ADI97774.1| undecaprenyl diphosphate synthase [Staphylococcus aureus subsp.
aureus ED133]
gi|302332866|gb|ADL23059.1| di-trans, poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus JKD6159]
gi|315194148|gb|EFU24541.1| di-trans, poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus CGS00]
gi|315198502|gb|EFU28831.1| di-trans, poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus CGS01]
gi|323441039|gb|EGA98746.1| undecaprenyl pyrophosphate synthase [Staphylococcus aureus O11]
gi|329727826|gb|EGG64277.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus 21189]
gi|329733651|gb|EGG69979.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus 21193]
Length = 256
Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats.
Identities = 103/240 (42%), Positives = 151/240 (62%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ SS+ P+HI IIMDGNGRWA R +PR GH +G++ +I A+++G+K LT++A
Sbjct: 17 EELDSSNIPEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITRVASDIGVKYLTLYA 76
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RP SE++ ++ L +FLK L + N+KV IG L + + A++
Sbjct: 77 FSTENWSRPESEVNYIMNLPVNFLKTFLPELIEKNVKVETIGFTDKLPKSTIEAINNAKE 136
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
+T NTGL L A NY R E+ +IKN+F ++ + S +D + I +L T D PDP
Sbjct: 137 KTANNTGLKLIFAINYGGRAELVHSIKNMFDELHQQGLNSDIIDETYINNHLMTKDYPDP 196
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+L+IRT GE+R+S+FL+WQV+YSEF+F + WPDF + + Y R RRFGGLS++
Sbjct: 197 ELLIRTSGEQRISNFLIWQVSYSEFIFNQKLWPDFDEDELIKCIKIYQSRQRRFGGLSEE 256
>gi|297208094|ref|ZP_06924525.1| di-trans, poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus ATCC 51811]
gi|297591295|ref|ZP_06949933.1| di-trans, poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus MN8]
gi|300912175|ref|ZP_07129618.1| di-trans, poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus TCH70]
gi|296887337|gb|EFH26239.1| di-trans, poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus ATCC 51811]
gi|297576181|gb|EFH94897.1| di-trans, poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus MN8]
gi|300886421|gb|EFK81623.1| di-trans, poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus TCH70]
gi|320140923|gb|EFW32770.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus MRSA131]
gi|320144361|gb|EFW36127.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus MRSA177]
Length = 267
Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats.
Identities = 103/240 (42%), Positives = 151/240 (62%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ SS+ P+HI IIMDGNGRWA R +PR GH +G++ +I A+++G+K LT++A
Sbjct: 28 EELDSSNIPEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITRVASDIGVKYLTLYA 87
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RP SE++ ++ L +FLK L + N+KV IG L + + A++
Sbjct: 88 FSTENWSRPESEVNYIMNLPVNFLKTFLPELIEKNVKVETIGFTDKLPKSTIEAINNAKE 147
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
+T NTGL L A NY R E+ +IKN+F ++ + S +D + I +L T D PDP
Sbjct: 148 KTANNTGLKLIFAINYGGRAELVHSIKNMFDELHQQGLNSDIIDETYINNHLMTKDYPDP 207
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+L+IRT GE+R+S+FL+WQV+YSEF+F + WPDF + + Y R RRFGGLS++
Sbjct: 208 ELLIRTSGEQRISNFLIWQVSYSEFIFNQKLWPDFDEDELIKCIKIYQSRQRRFGGLSEE 267
>gi|27365211|ref|NP_760739.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio vulnificus
CMCP6]
gi|37680737|ref|NP_935346.1| undecaprenyl pyrophosphate synthase [Vibrio vulnificus YJ016]
gi|42559945|sp|Q7MIG4|UPPS_VIBVY RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|42559973|sp|Q8DBF7|UPPS_VIBVU RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|27361358|gb|AAO10266.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio vulnificus
CMCP6]
gi|37199486|dbj|BAC95317.1| undecaprenyl pyrophosphate synthase [Vibrio vulnificus YJ016]
Length = 251
Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats.
Identities = 96/240 (40%), Positives = 154/240 (64%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ + + S P HI IIMDGNGRWA ++G PR GH+KG+ + +AAA+++ I+ +T+FA
Sbjct: 4 SQLFTESLPKHIAIIMDGNGRWAKSKGQPRVFGHKKGVSAVRKTIAAASKLNIQAITLFA 63
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP E+ L++L + L L KNN+++R+IG+ + + + EA++
Sbjct: 64 FSSENWRRPEEEVGLLMELFITVLSSEVKKLHKNNLRLRIIGDTSRFSERLQKKIVEAQE 123
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTG+ + +A NY + +I++A++ + Q + G + + D+ IAK+L SD+P+
Sbjct: 124 LTASNTGMVINVAANYGGKWDITQAVQKVAQQVALGDLSAEDITEDDIAKHLTMSDLPEV 183
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL+IRT GE R+S+F+LWQ+AY+E F P +WPDF E A+ + R+RRFG ++
Sbjct: 184 DLLIRTSGECRISNFMLWQMAYAEMYFTPVFWPDFGEESLIEAITWFVNRERRFGCTGEQ 243
>gi|293371698|ref|ZP_06618109.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides ovatus SD
CMC 3f]
gi|292633395|gb|EFF51965.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides ovatus SD
CMC 3f]
Length = 244
Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats.
Identities = 102/241 (42%), Positives = 148/241 (61%), Gaps = 2/241 (0%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + + P H+ IIMDGNGRWA RG R GHR G E +I AA +GIK LT++
Sbjct: 4 IEQIDKTRIPQHVAIIMDGNGRWAKQRGEERTYGHRAGAETVQKITEDAARLGIKYLTLY 63
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
FS NW RP EI+ L+ L+ +++ +L KNNI+ VIG+ L ++ L
Sbjct: 64 TFSTENWNRPQDEIAALMNLLLESIEEE--TLMKNNIRFNVIGDFKKLPVEVQKSLTSCI 121
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T N+G+ + +A +YSSR EI+ A++ I I++G + + I+ +LDT +PD
Sbjct: 122 KRTSKNSGMYMVLALSYSSRWEITEAVRQIATLIKAGEMSPEQITDECISSHLDTKFMPD 181
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL+IRTGGE RLS++LLWQ AYSE F +WPDF +E + A+ +Y R+RRFG S+
Sbjct: 182 PDLLIRTGGEIRLSNYLLWQCAYSELYFCDTFWPDFDKEELYKAIWEYQQRERRFGKTSE 241
Query: 242 K 242
+
Sbjct: 242 Q 242
>gi|171778816|ref|ZP_02919878.1| hypothetical protein STRINF_00737 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171282462|gb|EDT47886.1| hypothetical protein STRINF_00737 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 251
Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats.
Identities = 108/235 (45%), Positives = 145/235 (61%), Gaps = 4/235 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P+HIGIIMDGNGRWA R PR GH+ G++ E+ A++E+G+K LT++AFS NW
Sbjct: 17 KIPNHIGIIMDGNGRWAKKRMQPRVMGHKAGMDALQEVTIASSELGVKVLTVYAFSTENW 76
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+ ++ L F K L NN+KV+VIG L +K A +QT+ N+
Sbjct: 77 SRPEDEVKFIMNLPVEFFDKYVPELDTNNVKVQVIGETNRLPKATFDTMKRACEQTKHNS 136
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDL 184
GL L A NY R EI+ A+KNI Q++ + D+ +I+ +L T+ +P DPDL
Sbjct: 137 GLILNFALNYGGRSEITEAVKNIAQEVLEAKISPDDITEDVISNHLMTNHLPYLYRDPDL 196
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IIRT GE RLS+FL WQ AYSEF F P WPDF ++ A+ +YN R RRFGG+
Sbjct: 197 IIRTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKDELIKAIAEYNQRHRRFGGI 251
>gi|269926621|ref|YP_003323244.1| undecaprenyl diphosphate synthase [Thermobaculum terrenum ATCC
BAA-798]
gi|269790281|gb|ACZ42422.1| undecaprenyl diphosphate synthase [Thermobaculum terrenum ATCC
BAA-798]
Length = 234
Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats.
Identities = 105/237 (44%), Positives = 151/237 (63%), Gaps = 4/237 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
MS+ P+HIGIIMDGNGRWA + GLPR GHR G+ +V A E+GIK LT++AFS
Sbjct: 1 MSNGIPNHIGIIMDGNGRWAVSHGLPRYEGHRAGVRNIRNVVEACVELGIKYLTVYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+S L+ ++++ LK L KN +++R +G+ L + + +++A + T+
Sbjct: 61 ENWSRPPEEVSMLLSILENVLKTETPELHKNGVQIRHLGSLDELPEHLQHEIRKALELTK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N L L +A+NY R EI A+K I + V +D L ++YL T+ +PDPDLI
Sbjct: 121 YNDRLVLSVAYNYGGRAEIVHAVKRIILE----GVPPDKIDEHLFSQYLYTAGLPDPDLI 176
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRT GE RLS+FL+WQ AY+E+ P +WPDF++E A+ Y R R+FGGL ++
Sbjct: 177 IRTAGEMRLSNFLIWQAAYAEYWSTPVFWPDFTKEHLKQAVEDYGRRQRKFGGLLEE 233
>gi|222085861|ref|YP_002544392.1| undecaprenyl diphosphate synthase [Agrobacterium radiobacter K84]
gi|221723309|gb|ACM26465.1| undecaprenyl diphosphate synthase [Agrobacterium radiobacter K84]
Length = 247
Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats.
Identities = 140/235 (59%), Positives = 182/235 (77%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S+ P+H+ IIMDGNGRWA ARGLPR GHRKG+E E V AA ++G+K LT+FAFS N
Sbjct: 7 SAIPEHVAIIMDGNGRWANARGLPRTMGHRKGVEAVRETVRAAGDIGVKYLTLFAFSSEN 66
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP +E+S+L+ L+K+F+++ L + N+++RVIG+R +L DIL +L EAE+ TR N
Sbjct: 67 WRRPETEVSDLLGLLKAFIRRDLAELHRQNVRIRVIGDRNNLRGDILPLLIEAEETTRDN 126
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T L L IAFNY SRDEISRA+ ++ +D+E+G + D+ L+ LDT+ +PDPDLIIR
Sbjct: 127 TALTLVIAFNYGSRDEISRALVSLARDVEAGRLRPQDISPELVGARLDTAGIPDPDLIIR 186
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
T GE+RLS+FLLWQ AYSEF+F+PEYWPDFSR+LFF AL +Y RDRRFGGLS K
Sbjct: 187 TSGEERLSNFLLWQAAYSEFMFMPEYWPDFSRDLFFSALEKYAARDRRFGGLSAK 241
>gi|22538054|ref|NP_688905.1| undecaprenyl pyrophosphate synthase [Streptococcus agalactiae
2603V/R]
gi|42559981|sp|Q8DXD5|UPPS_STRA5 RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|22534958|gb|AAN00778.1|AE014278_5 undecaprenyl diphosphate synthase [Streptococcus agalactiae
2603V/R]
Length = 250
Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats.
Identities = 108/240 (45%), Positives = 142/240 (59%), Gaps = 4/240 (1%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
M P HIGIIMDGNGRWA R PR GH+ G++ E+ AA+ +G+K LT++AF
Sbjct: 11 EMPLEKIPAHIGIIMDGNGRWAKKRLKPRVMGHKAGMDALQEVTIAASGLGVKVLTVYAF 70
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP E+ ++ L F K L KNN++V+VIG+ L ++ A +
Sbjct: 71 STENWSRPDDEVKFIMNLPVKFFDKYVPELDKNNVRVQVIGDTHKLPKATYDAMQRACLR 130
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP--- 180
T+ N+GL L A NY R EI+ AIK I QD+ + D+ L+A +L T+ +P
Sbjct: 131 TKHNSGLVLNFALNYGGRSEITNAIKEIAQDVLEAKLNPDDITEDLVANHLMTNSLPYLY 190
Query: 181 -DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDLIIRT GE RLS+FL WQ AYSEF F P WPDF ++ A+ YN R RRFG +
Sbjct: 191 RDPDLIIRTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKDELHKAIVDYNQRHRRFGSV 250
>gi|15614986|ref|NP_243289.1| undecaprenyl pyrophosphate synthetase [Bacillus halodurans C-125]
gi|13633989|sp|Q9KA67|UPPS_BACHD RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|10175043|dbj|BAB06142.1| undecaprenyl pyrophosphate synthetase [Bacillus halodurans C-125]
Length = 256
Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats.
Identities = 105/236 (44%), Positives = 161/236 (68%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S+ S+ P H+ IIMDGNGRWA +GLPR AGHR+G++V N+IV A ++ I+ L+++AF
Sbjct: 21 SLDESAIPKHVAIIMDGNGRWAKKKGLPRIAGHREGMKVINKIVRKAIDLKIEVLSLYAF 80
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP +E+ L+KL + FLK +L + N++VR++G +L + + +A ++
Sbjct: 81 STENWKRPRTEVDYLLKLPERFLKLELPNLMEENVQVRIMGGLDTLPEHTAKAVTKAMEE 140
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NTGL L A NY SR E+ A+K + +++E+G++ S + +I+++L T+D+ DPD
Sbjct: 141 TKDNTGLILNFALNYGSRYEMVEAMKQVAKEVETGTLSSDAITEDVISRHLMTADLRDPD 200
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
L+IRT GE RLS+F+LWQ+AYSEF F WPDF+ A+ Y R RR+GG+
Sbjct: 201 LLIRTSGEIRLSNFMLWQLAYSEFWFTDVLWPDFTEHHLTEAIAVYQKRARRYGGV 256
>gi|191638567|ref|YP_001987733.1| Di-trans-poly-cis-decaprenylcistransferase (Undecaprenyl
diphosphate synthetase) [Lactobacillus casei BL23]
gi|190712869|emb|CAQ66875.1| Di-trans-poly-cis-decaprenylcistransferase (Undecaprenyl
diphosphate synthetase) [Lactobacillus casei BL23]
gi|327382605|gb|AEA54081.1| Undecaprenyl diphosphate synthase [Lactobacillus casei LC2W]
gi|327385803|gb|AEA57277.1| Undecaprenyl diphosphate synthase [Lactobacillus casei BD-II]
Length = 250
Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats.
Identities = 106/241 (43%), Positives = 144/241 (59%), Gaps = 3/241 (1%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P HI IIMDGNGRWA R PR AGH++G++ I AA+ +G+K LT++AF
Sbjct: 10 KLDPARIPAHIAIIMDGNGRWAKRRFFPRVAGHKQGMQNVKTITKAASRLGVKVLTLYAF 69
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP SE++ L++L F L K N+KV V+G L ++A
Sbjct: 70 STENWKRPGSEVNYLMRLPVDFFNDFMPDLIKENVKVEVMGELDDLPPQTRQASEKAMAD 129
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT---SDVP 180
T NTG+ L A NY RDE+ A + + + ++ G + D+D A L T D+
Sbjct: 130 TANNTGMILNFALNYGGRDELVHAAQKLAKQVQEGELSPDDIDDRHFANALMTGFLGDLA 189
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GE R+S+FLLWQ+AYSE VF+ +YWPDFS A+ +Y RDRRFGGL
Sbjct: 190 DPDLLIRTSGELRISNFLLWQIAYSELVFVDDYWPDFSPAALEAAIAEYQARDRRFGGLK 249
Query: 241 K 241
K
Sbjct: 250 K 250
>gi|210615978|ref|ZP_03290878.1| hypothetical protein CLONEX_03097 [Clostridium nexile DSM 1787]
gi|210149983|gb|EEA80992.1| hypothetical protein CLONEX_03097 [Clostridium nexile DSM 1787]
Length = 237
Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats.
Identities = 113/233 (48%), Positives = 162/233 (69%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P H+ II+DGNGRWA +G+PR GH +G + I A ++GIK LT++AFS NW
Sbjct: 2 NVPQHVAIILDGNGRWAKKKGMPRNYGHAQGSKNVERICKEAYKMGIKYLTVYAFSTENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP SE+ L+KL+++++K + +KN +KVRVIG++ +LDDDI + E E+ ++ N
Sbjct: 62 SRPKSEVDALMKLLRNYMKTCLKTAEKNRMKVRVIGDKTALDDDIRKRIDELEEASKNND 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GLN IA NY SRDE+ RA+K + D E G + + ++ ++ +YLDT D+PDPDL+IRT
Sbjct: 122 GLNFQIALNYGSRDEMIRAMKRMCTDCEDGRLHADEISETVFEQYLDTHDIPDPDLLIRT 181
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
GE+RLS++LLWQ+AYSEF F WPDF++E A+ YN RDRRFGG+ +
Sbjct: 182 SGEQRLSNYLLWQLAYSEFYFTDVLWPDFTKEELKKAIEHYNSRDRRFGGVKE 234
>gi|323339425|ref|ZP_08079707.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus ruminis
ATCC 25644]
gi|323093136|gb|EFZ35726.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus ruminis
ATCC 25644]
Length = 262
Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats.
Identities = 104/241 (43%), Positives = 152/241 (63%), Gaps = 3/241 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P+HI IIMDGNGRWA R LPR AGH++G+E EI AA+ +G+K LT++AFS
Sbjct: 19 LDENKIPNHIAIIMDGNGRWAQKRRLPRVAGHKQGMENVKEITKAASNLGVKVLTLYAFS 78
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP SE+S L+ L F L +NN+KV V+G L + + +A +QT
Sbjct: 79 TENWKRPKSEVSFLMDLPSKFFDTFVPELIENNVKVNVMGYTDQLPEKTQKAVFDAIEQT 138
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP---D 181
+ TG+ L A NY R EI +K I + +++ + + ++D I K L T+ V D
Sbjct: 139 KNCTGMILNFALNYGGRAEIVTGVKKIAEKVQNNELAADEIDEETIRKSLMTASVYPYDD 198
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL+IRT GE+R+S+FLLWQ+AYSE VF +WPD+S ++++ R+RRFGGL++
Sbjct: 199 PDLLIRTSGEERISNFLLWQLAYSEMVFTDTFWPDYSPADLAEDISKFQQRNRRFGGLNE 258
Query: 242 K 242
+
Sbjct: 259 E 259
>gi|160885544|ref|ZP_02066547.1| hypothetical protein BACOVA_03544 [Bacteroides ovatus ATCC 8483]
gi|299147396|ref|ZP_07040461.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides sp. 3_1_23]
gi|156109166|gb|EDO10911.1| hypothetical protein BACOVA_03544 [Bacteroides ovatus ATCC 8483]
gi|298514674|gb|EFI38558.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides sp. 3_1_23]
Length = 244
Score = 299 bits (767), Expect = 1e-79, Method: Composition-based stats.
Identities = 102/241 (42%), Positives = 148/241 (61%), Gaps = 2/241 (0%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + + P H+ IIMDGNGRWA RG R GHR G E I AA +GIK LT++
Sbjct: 4 IEQIDKTRIPQHVAIIMDGNGRWAKQRGEERTYGHRAGAETVQNITEDAARLGIKYLTLY 63
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
FS NW RP EI+ L+ L+ +++ +L KNNI+ VIG+ L ++ L
Sbjct: 64 TFSTENWNRPQDEIAALMNLLLESIEEE--TLMKNNIRFNVIGDFKKLPVEVQKSLASCI 121
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T N+G+ + +A +YSSR EI+ A++ I I++G + + I+ +LDT +PD
Sbjct: 122 ERTSKNSGMYMVLALSYSSRWEITEAVRQIATLIKAGEMSPEQITDECISSHLDTKFMPD 181
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL+IRTGGE RLS++LLWQ AYSE F +WPDF +E + A+ +Y R+RRFG S+
Sbjct: 182 PDLLIRTGGEIRLSNYLLWQCAYSELYFCDTFWPDFDKEELYKAIWEYQQRERRFGKTSE 241
Query: 242 K 242
+
Sbjct: 242 Q 242
>gi|313203917|ref|YP_004042574.1| undecaprenyl pyrophosphate synthetase [Paludibacter propionicigenes
WB4]
gi|312443233|gb|ADQ79589.1| Undecaprenyl pyrophosphate synthetase [Paludibacter propionicigenes
WB4]
Length = 241
Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats.
Identities = 104/237 (43%), Positives = 153/237 (64%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + S P HI IIMDGNGRWA RG R GH+ G+ E AAA++GI+ LT++
Sbjct: 5 IEKIDKSRLPKHIAIIMDGNGRWAKERGYDRIFGHQNGVTSVRETTEAAAKIGIEYLTLY 64
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP SE+ L++L+ ++K +L KNN+++ IG+ L + L+
Sbjct: 65 AFSTENWGRPQSEVDALMELLIDTIEKETPTLNKNNVRLLAIGDISRLPGNAGEKLQRCI 124
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
QT NT L+L +A +YSSR EI+ A+KNI +D+ +G + D++ LI+ YL T+ +PD
Sbjct: 125 SQTADNTSLSLVLALSYSSRWEITNALKNICKDVSAGKISDKDINEELISTYLTTNSIPD 184
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PDL+IRT GE+R+S+FLLWQ+AY+E F +WP+F +E A+ ++ R+RRFG
Sbjct: 185 PDLLIRTSGEERISNFLLWQIAYTELYFTETHWPEFRKENLHEAIYKFQQRERRFGK 241
>gi|25011942|ref|NP_736337.1| undecaprenyl pyrophosphate synthase [Streptococcus agalactiae
NEM316]
gi|42559984|sp|Q8E359|UPPS_STRA3 RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|24413484|emb|CAD47562.1| Unknown [Streptococcus agalactiae NEM316]
Length = 250
Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats.
Identities = 108/240 (45%), Positives = 142/240 (59%), Gaps = 4/240 (1%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
M P HIGIIMDGNGRWA R PR GH+ G++ E+ AA+ +G+K LT++AF
Sbjct: 11 EMPLEKIPAHIGIIMDGNGRWAKKRLKPRVMGHKAGMDALQEVTIAASGLGVKVLTVYAF 70
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP E+ ++ L F K L KNN++V+VIG+ L ++ A +
Sbjct: 71 STENWSRPDDEVKFIMNLPVEFFDKYVPELDKNNVRVQVIGDTHKLPKATYDAMQRACLR 130
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP--- 180
T+ N+GL L A NY R EI+ AIK I QD+ + D+ L+A +L T+ +P
Sbjct: 131 TKHNSGLVLNFALNYGGRSEITNAIKEIAQDVLEAKLNPDDITEDLVANHLMTNSLPYLY 190
Query: 181 -DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDLIIRT GE RLS+FL WQ AYSEF F P WPDF ++ A+ YN R RRFG +
Sbjct: 191 RDPDLIIRTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKDELHKAIVDYNQRHRRFGSV 250
>gi|221142494|ref|ZP_03566987.1| di-trans, poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus str. JKD6009]
gi|269940751|emb|CBI49133.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus subsp.
aureus TW20]
gi|302751083|gb|ADL65260.1| di-trans, poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus str. JKD6008]
gi|329313930|gb|AEB88343.1| Di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus T0131]
Length = 256
Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats.
Identities = 102/240 (42%), Positives = 151/240 (62%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ SS+ P+HI IIMDGNGRWA R +PR GH +G++ +I A+++G+K LT++A
Sbjct: 17 EELDSSNIPEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITRVASDIGVKYLTLYA 76
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RP SE++ ++ L +FL+ L + N+KV IG L + + A++
Sbjct: 77 FSTENWSRPESEVNYIMNLPVNFLETFLPELIEKNVKVETIGFTDKLPKSTIEAINNAKE 136
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
+T NTGL L A NY R E+ +IKN+F ++ + S +D + I +L T D PDP
Sbjct: 137 KTANNTGLKLIFAINYGGRAELVHSIKNMFDELHQQGLNSDIIDETYINNHLMTKDYPDP 196
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+L+IRT GE+R+S+FL+WQV+YSEF+F + WPDF + + Y R RRFGGLS++
Sbjct: 197 ELLIRTSGEQRISNFLIWQVSYSEFIFNQKLWPDFDEDELIKCIKIYQSRQRRFGGLSEE 256
>gi|323443908|gb|EGB01519.1| undecaprenyl pyrophosphate synthase [Staphylococcus aureus O46]
Length = 256
Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats.
Identities = 103/240 (42%), Positives = 151/240 (62%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ SS+ P+HI IIMDGNGRWA R +PR GH +G++ +I A+++G+K LT++A
Sbjct: 17 EELDSSNIPEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITRVASDIGVKYLTLYA 76
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RP SE++ ++ L +FLK L + N+KV IG L + + A++
Sbjct: 77 FSTENWSRPESEVNYIMNLPVNFLKTFLPELIEKNVKVETIGFTDKLPKSTIEAINNAKE 136
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
+T NTGL L A NY R E+ +IKN+F ++ + S +D + I +L T D PDP
Sbjct: 137 KTANNTGLKLIFAINYGGRAELVHSIKNMFDELHQQGLNSDFIDETYINNHLMTKDYPDP 196
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+L+IRT GE+R+S+FL+WQV+YSEF+F + WPDF + + Y R RRFGGLS++
Sbjct: 197 ELLIRTSGEQRISNFLIWQVSYSEFIFNQKLWPDFDEDELIKCIKIYQSRQRRFGGLSEE 256
>gi|148241891|ref|YP_001227048.1| undecaprenyl pyrophosphate synthetase [Synechococcus sp. RCC307]
gi|147850201|emb|CAK27695.1| Undecaprenyl pyrophosphate synthetase [Synechococcus sp. RCC307]
Length = 259
Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats.
Identities = 91/242 (37%), Positives = 140/242 (57%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ A + + P H+ +IMDGNGRWA RGLPR GHR+G+E + ++ GI LT
Sbjct: 17 LPAVLQADQLPVHVAVIMDGNGRWARQRGLPRVMGHRQGVEALKRTLRLCSDWGIGALTA 76
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP E+S L+ L + L + +L+K +++R +G+ L + ++ EA
Sbjct: 77 YAFSTENWSRPGEEVSFLMTLFEQVLARELEALQKEQVRIRFLGDLAPLPAKLQALITEA 136
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+++ N+G++ + NY SR E+ A + + ++ G + +D A L T+ P
Sbjct: 137 TERSAANSGIHFNVCTNYGSRQELVHAARALAAQVQRGELDPDAIDERAFAAQLHTAGQP 196
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GE+RLS+FLLWQ+AY+E WPDF AL + R RRFGG+
Sbjct: 197 DPDLLIRTSGEQRLSNFLLWQLAYAELHVTDVLWPDFDATALTQALVDFQGRQRRFGGVQ 256
Query: 241 KK 242
++
Sbjct: 257 EE 258
>gi|304381176|ref|ZP_07363829.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus ATCC BAA-39]
gi|304340159|gb|EFM06100.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus ATCC BAA-39]
Length = 267
Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats.
Identities = 102/240 (42%), Positives = 151/240 (62%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ SS+ P+HI IIMDGNGRWA R +PR GH +G++ +I A+++G+K LT++A
Sbjct: 28 EELDSSNIPEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITRVASDIGVKYLTLYA 87
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RP SE++ ++ L +FL+ L + N+KV IG L + + A++
Sbjct: 88 FSTENWSRPESEVNYIMNLPVNFLETFLPELIEKNVKVETIGFTDKLPKSTIEAINNAKE 147
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
+T NTGL L A NY R E+ +IKN+F ++ + S +D + I +L T D PDP
Sbjct: 148 KTANNTGLKLIFAINYGGRAELVHSIKNMFDELHQQGLNSDIIDETYINNHLMTKDYPDP 207
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+L+IRT GE+R+S+FL+WQV+YSEF+F + WPDF + + Y R RRFGGLS++
Sbjct: 208 ELLIRTSGEQRISNFLIWQVSYSEFIFNQKLWPDFDEDELIKCIKIYQSRQRRFGGLSEE 267
>gi|15924250|ref|NP_371784.1| undecaprenyl pyrophosphatase synthetase [Staphylococcus aureus
subsp. aureus Mu50]
gi|15926843|ref|NP_374376.1| undecaprenyl pyrophosphate synthase [Staphylococcus aureus subsp.
aureus N315]
gi|148267750|ref|YP_001246693.1| undecaprenyl pyrophosphate synthase [Staphylococcus aureus subsp.
aureus JH9]
gi|150393809|ref|YP_001316484.1| undecaprenyl pyrophosphate synthase [Staphylococcus aureus subsp.
aureus JH1]
gi|156979581|ref|YP_001441840.1| undecaprenyl pyrophosphatase synthetase [Staphylococcus aureus
subsp. aureus Mu3]
gi|253315616|ref|ZP_04838829.1| undecaprenyl pyrophosphatase synthetase [Staphylococcus aureus
subsp. aureus str. CF-Marseille]
gi|255006047|ref|ZP_05144648.2| undecaprenyl pyrophosphatase synthetase [Staphylococcus aureus
subsp. aureus Mu50-omega]
gi|257795684|ref|ZP_05644663.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
A9781]
gi|258416087|ref|ZP_05682355.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus A9763]
gi|258421670|ref|ZP_05684594.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
A9719]
gi|258434826|ref|ZP_05688900.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus A9299]
gi|258444598|ref|ZP_05692927.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus A8115]
gi|258447569|ref|ZP_05695713.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus A6300]
gi|258449411|ref|ZP_05697514.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus A6224]
gi|258454790|ref|ZP_05702754.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus A5937]
gi|269202877|ref|YP_003282146.1| undecaprenyl diphosphate synthase [Staphylococcus aureus subsp.
aureus ED98]
gi|282892748|ref|ZP_06300983.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
A8117]
gi|282927602|ref|ZP_06335218.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
A10102]
gi|295406197|ref|ZP_06816004.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
A8819]
gi|296274818|ref|ZP_06857325.1| undecaprenyl pyrophosphate synthase [Staphylococcus aureus subsp.
aureus MR1]
gi|297244425|ref|ZP_06928308.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
A8796]
gi|42559923|sp|P60476|UPPS_STAAM RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|42559924|sp|P60477|UPPS_STAAN RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|13701060|dbj|BAB42355.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus subsp.
aureus N315]
gi|14247030|dbj|BAB57422.1| undecaprenyl pyrophosphatase synthetase [Staphylococcus aureus
subsp. aureus Mu50]
gi|147740819|gb|ABQ49117.1| Undecaprenyl pyrophosphate synthetase [Staphylococcus aureus subsp.
aureus JH9]
gi|149946261|gb|ABR52197.1| undecaprenyl diphosphate synthase [Staphylococcus aureus subsp.
aureus JH1]
gi|156721716|dbj|BAF78133.1| undecaprenyl pyrophosphatase synthetase [Staphylococcus aureus
subsp. aureus Mu3]
gi|257789656|gb|EEV27996.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
A9781]
gi|257839235|gb|EEV63711.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus A9763]
gi|257842356|gb|EEV66781.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
A9719]
gi|257849187|gb|EEV73169.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus A9299]
gi|257850091|gb|EEV74044.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus A8115]
gi|257853760|gb|EEV76719.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus A6300]
gi|257857399|gb|EEV80297.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus A6224]
gi|257863173|gb|EEV85937.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus A5937]
gi|262075167|gb|ACY11140.1| undecaprenyl diphosphate synthase [Staphylococcus aureus subsp.
aureus ED98]
gi|282590605|gb|EFB95682.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
A10102]
gi|282764745|gb|EFC04870.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
A8117]
gi|285816942|gb|ADC37429.1| Undecaprenyl pyrophosphate synthetase [Staphylococcus aureus
04-02981]
gi|294968785|gb|EFG44807.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
A8819]
gi|297178455|gb|EFH37701.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
A8796]
gi|312829654|emb|CBX34496.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus ECT-R 2]
gi|315131054|gb|EFT87038.1| undecaprenyl pyrophosphatase synthetase [Staphylococcus aureus
subsp. aureus CGS03]
gi|329727600|gb|EGG64056.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus 21172]
Length = 256
Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats.
Identities = 103/240 (42%), Positives = 151/240 (62%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ SS+ P+HI IIMDGNGRWA R +PR GH +G++ +I A+++G+K LT++A
Sbjct: 17 EELDSSNIPEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITRIASDIGVKYLTLYA 76
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RP SE++ ++ L +FLK L + N+KV IG L + + A++
Sbjct: 77 FSTENWSRPESEVNYIMNLPVNFLKTFLPELIEKNVKVETIGFTDKLPKSTIEAINNAKE 136
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
+T NTGL L A NY R E+ +IKN+F ++ + S +D + I +L T D PDP
Sbjct: 137 KTANNTGLKLIFAINYGGRAELVHSIKNMFDELHQQGLNSDIIDETYINNHLMTKDYPDP 196
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+L+IRT GE+R+S+FL+WQV+YSEF+F + WPDF + + Y R RRFGGLS++
Sbjct: 197 ELLIRTSGEQRISNFLIWQVSYSEFIFNQKLWPDFDEDELIKCIKIYQSRQRRFGGLSEE 256
>gi|253731879|ref|ZP_04866044.1| Di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus USA300_TCH959]
gi|253733502|ref|ZP_04867667.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus TCH130]
gi|253724289|gb|EES93018.1| Di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus USA300_TCH959]
gi|253728556|gb|EES97285.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus TCH130]
Length = 267
Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats.
Identities = 103/240 (42%), Positives = 151/240 (62%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ SS+ P+HI IIMDGNGRWA R +PR GH +G++ +I A+++G+K LT++A
Sbjct: 28 EELDSSNIPEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITRIASDIGVKYLTLYA 87
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RP SE++ ++ L +FLK L + N+KV IG L + + A++
Sbjct: 88 FSTENWSRPESEVNYIMNLPVNFLKTFLPELIEKNVKVETIGFTDKLPKSTIEAINNAKE 147
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
+T NTGL L A NY R E+ +IKN+F ++ + S +D + I +L T D PDP
Sbjct: 148 KTANNTGLKLIFAINYGGRAELVHSIKNMFDELHQQGLNSDIIDETYINNHLMTKDYPDP 207
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+L+IRT GE+R+S+FL+WQV+YSEF+F + WPDF + + Y R RRFGGLS++
Sbjct: 208 ELLIRTSGEQRISNFLIWQVSYSEFIFNQKLWPDFDEDELIKCIKIYQSRQRRFGGLSEE 267
>gi|300771358|ref|ZP_07081234.1| Di-trans,poly-cis-decaprenylcistransferase [Sphingobacterium
spiritivorum ATCC 33861]
gi|300762028|gb|EFK58848.1| Di-trans,poly-cis-decaprenylcistransferase [Sphingobacterium
spiritivorum ATCC 33861]
Length = 245
Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats.
Identities = 95/239 (39%), Positives = 145/239 (60%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ ++ P H+ IIMDGNGRWA G R GH+ G+ E + A E+GI LT++AF
Sbjct: 6 KIDRNNLPQHVAIIMDGNGRWAKGLGKLRIFGHQNGVSAVREAMEGAVELGIPYLTLYAF 65
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP E+ L++L+ + L K + + N I++ IG+ L + L E+ +
Sbjct: 66 STENWNRPKLEVLALMELLVTTLSKEIKTFQDNGIRLNTIGDIDKLPKNCRAKLIESMEL 125
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NT L +A +YSS+ EI A K I + + G++ +D + A +L T ++PDPD
Sbjct: 126 TAQNTTCVLTLALSYSSQKEIVDATKEICKQVMQGNLDIDAIDEKVFANHLYTRNMPDPD 185
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRT GE+R+S++LLWQ+AYSE F+P+ WP+F+RE + + Y R+RRFG S++
Sbjct: 186 LLIRTSGEQRISNYLLWQIAYSELSFLPKMWPEFTREDLYECVYNYQQRERRFGKTSEQ 244
>gi|257058043|ref|YP_003135931.1| undecaprenyl pyrophosphate synthase [Cyanothece sp. PCC 8802]
gi|256588209|gb|ACU99095.1| undecaprenyl diphosphate synthase [Cyanothece sp. PCC 8802]
Length = 249
Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats.
Identities = 90/231 (38%), Positives = 138/231 (59%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P+H+ +IMDGNGRWA RGLPR GH++G++ +++ + G+ LT +AFS NW
Sbjct: 19 RLPNHVAVIMDGNGRWAKRRGLPRIMGHQRGVDTLKDLLRCCKDWGVPALTAYAFSTENW 78
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP+ E+ L+ L + L++ + + N+++R +GN L + + + T+ NT
Sbjct: 79 GRPLDEVEFLMTLFERVLRRELREMMEENVRIRFVGNLAVLPPSLQEEIARSMQDTQNNT 138
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
G++ +A NY R EI +A + I ++ G + D+D S+ +L T + PDL+IRT
Sbjct: 139 GIDFTVATNYGGRQEIVQACQAIATQVQQGLLNPEDIDESVFEGHLYTKGIAHPDLLIRT 198
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE RLS+FLLWQ+AY+E WPDF+RE F AL Y R+RRFG +
Sbjct: 199 SGEMRLSNFLLWQLAYAEIYVTQTLWPDFNREEFHQALLAYQQRERRFGKI 249
>gi|332359974|gb|EGJ37788.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sanguinis
SK1056]
Length = 249
Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats.
Identities = 104/235 (44%), Positives = 143/235 (60%), Gaps = 4/235 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P HI +IMDGNGRWA R PR GH+ G+E + AA E+G++ LT++ FS NW
Sbjct: 15 NVPKHIAVIMDGNGRWAKKRMQPRVFGHKAGMETLQRVTIAAKEMGVQVLTVYVFSTENW 74
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+S ++ L F + L KNN+K+++IG+ L L++AE T+LNT
Sbjct: 75 SRPEKEVSFIMNLPVEFYDRYVPELHKNNVKIQMIGDTAKLPKATFEALEKAESLTKLNT 134
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDL 184
GL L A NY R EI++A+K I QD+ + D+ +I YL TS++P DPDL
Sbjct: 135 GLILNFALNYGGRYEINQAVKLIAQDVLDAKLSPGDITEEVIGNYLYTSNLPKMLRDPDL 194
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE RLS+FL WQ AYSE F WPDF + A+ +Y+ R+RRFGG+
Sbjct: 195 VIRTSGELRLSNFLPWQSAYSELYFTDILWPDFDEKALKTAIAEYSRRNRRFGGV 249
>gi|331090949|ref|ZP_08339791.1| di-trans,poly-cis-decaprenylcistransferase [Lachnospiraceae
bacterium 2_1_46FAA]
gi|330405171|gb|EGG84707.1| di-trans,poly-cis-decaprenylcistransferase [Lachnospiraceae
bacterium 2_1_46FAA]
Length = 236
Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats.
Identities = 112/234 (47%), Positives = 156/234 (66%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P HI II+DGNGRWA A+G+PR GH +G + I A ++G+K LT++AFS NW
Sbjct: 2 NIPQHIAIILDGNGRWAKAKGMPRNYGHAQGSKNVERICEEAYKMGVKYLTVYAFSTENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+ L+KL+++++K + KN +KVRV+G++ LDDDI ++E E T N
Sbjct: 62 SRPKEEVDALMKLLRNYMKTCLKTAAKNRMKVRVLGDKTKLDDDIRKRIEELEKATVDND 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GLN IA NY SRDE+ RA+K + D + G + D+ S+ YLDT D+PDPDL+IRT
Sbjct: 122 GLNFQIALNYGSRDEMIRAMKKMAADCKEGKLEVEDISESVFEAYLDTHDIPDPDLLIRT 181
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE RLS++LLWQ+AY+EF F WPDF+++ A+ YN RDRRFGG ++
Sbjct: 182 SGELRLSNYLLWQLAYTEFYFTDVLWPDFTKKELEKAILHYNNRDRRFGGTKEE 235
>gi|258423899|ref|ZP_05686784.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
A9635]
gi|257845928|gb|EEV69957.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
A9635]
Length = 256
Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats.
Identities = 103/240 (42%), Positives = 152/240 (63%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ SS+ P+HI IIMDGNGRWA R +PR GH +G++ +I A+++G+K LT++A
Sbjct: 17 EELDSSNIPEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITRVASDIGVKYLTLYA 76
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RP SE++ ++ L +FLK L + N+KV IG L + + A++
Sbjct: 77 FSTENWSRPESEVNYIMNLPVNFLKTFLPELIEKNVKVETIGFTDKLPKSTIEAINNAKE 136
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
+T NTGL L A NY R E++ +IKN+F ++ + S +D + I +L T D PDP
Sbjct: 137 KTANNTGLKLIFAINYGGRAELAHSIKNMFDELHQQGLNSDIIDETYINNHLMTKDYPDP 196
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+L+IRT GE+R+S+FL+WQV+YSEF+F + WPDF + + Y R RRFGGLS++
Sbjct: 197 ELLIRTSGEQRISNFLIWQVSYSEFIFNQKLWPDFDEDELIKCIKIYQSRQRRFGGLSEE 256
>gi|224368821|ref|YP_002602982.1| UppS [Desulfobacterium autotrophicum HRM2]
gi|223691537|gb|ACN14820.1| UppS [Desulfobacterium autotrophicum HRM2]
Length = 255
Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats.
Identities = 100/235 (42%), Positives = 148/235 (62%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P H+ +IMDGNGRWA R + R GH++G+E IV AA ++GI LT++AFS
Sbjct: 11 IDPERIPRHVAVIMDGNGRWAKKRFMNRVNGHQQGVETVRTIVTAARQIGIDVLTLYAFS 70
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP SE+ L+ L+K FL K +L + + + VIG + L DD+ ++ + QT
Sbjct: 71 TENWSRPASEVKALMVLLKRFLAKEIDTLDRQGVCLNVIGQQSRLPDDVQTQIERSMVQT 130
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
R NTG+ L +A +Y R+EI+RA++ I ++ SG + D+ +A+ L T+ PDPD+
Sbjct: 131 RGNTGMVLNLALSYGGREEITRAVRAIVNEVSSGGLSVQDITEETVAERLYTAGQPDPDV 190
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE RLS+F+LWQVAY+E WPDFS++ F + QY R+RR+G +
Sbjct: 191 LIRTSGEMRLSNFMLWQVAYAELFITDTLWPDFSQKEFLDIIRQYQTRERRYGKV 245
>gi|288800327|ref|ZP_06405785.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella sp. oral
taxon 299 str. F0039]
gi|288332540|gb|EFC71020.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella sp. oral
taxon 299 str. F0039]
Length = 248
Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats.
Identities = 94/239 (39%), Positives = 146/239 (61%), Gaps = 2/239 (0%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ P HI IIMDGNGRWA +G R GH+ G++ I + +G++ LT++ F
Sbjct: 5 NLDKQRVPRHIAIIMDGNGRWATQKGKDRSYGHQAGVDTVRRITSECVSLGVEYLTLYTF 64
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP +E++ L+ L+ S L+ KNN++ RVIG+ L + + L+E E
Sbjct: 65 STENWNRPETEVAALMGLVLSSLEDEI--FMKNNVRFRVIGDMSRLPEAVQHKLRETELH 122
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NT + + +A +YSSR EI+ A K I ++SG + +D+ ++++ ++T +PDP+
Sbjct: 123 TEKNTAMTMVVALSYSSRWEITEATKRIATKVQSGEIAINDITEDMLSQNMETLFMPDPE 182
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRTGGE+R+S++LLWQ+AYSE F +WPDF+ E A+ Y R RRFG +
Sbjct: 183 LLIRTGGEQRISNYLLWQIAYSELYFCDTFWPDFNEEDLHKAIADYQSRQRRFGKTEAQ 241
>gi|227540580|ref|ZP_03970629.1| Di-trans,poly-cis-decaprenylcistransferase [Sphingobacterium
spiritivorum ATCC 33300]
gi|227239662|gb|EEI89677.1| Di-trans,poly-cis-decaprenylcistransferase [Sphingobacterium
spiritivorum ATCC 33300]
Length = 245
Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats.
Identities = 94/239 (39%), Positives = 145/239 (60%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ ++ P H+ IIMDGNGRWA G R GH+ G+ E + A E+GI LT++AF
Sbjct: 6 KIDRNNLPQHVAIIMDGNGRWAKGLGKLRIFGHQNGVSAVREAMEGAVELGIPYLTLYAF 65
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP E+ L++L+ + L K + + N I++ IG+ L + L E+ +
Sbjct: 66 STENWNRPKLEVLALMELLVTTLSKEIKTFQDNGIRLNTIGDIDKLPKNCRAKLMESMEL 125
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NT L +A +YSS+ EI A K I + + G++ +D + A +L T ++PDPD
Sbjct: 126 TAHNTTCVLTLALSYSSQKEIVDATKEICKQVIQGNLDIDAIDEKVFANHLYTRNMPDPD 185
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRT GE+R+S++LLWQ+AYSE F+P+ WP+F+R+ + + Y R+RRFG S++
Sbjct: 186 LLIRTSGEQRISNYLLWQIAYSELSFLPKMWPEFTRDDLYECVYNYQQRERRFGKTSEQ 244
>gi|154686070|ref|YP_001421231.1| hypothetical protein RBAM_016370 [Bacillus amyloliquefaciens FZB42]
gi|154351921|gb|ABS74000.1| UppS [Bacillus amyloliquefaciens FZB42]
Length = 260
Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats.
Identities = 102/235 (43%), Positives = 148/235 (62%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
++ P HI IIMDGNGRWA R LPR AGH +G++V + A+++G+K LT++AFS
Sbjct: 26 ILKGEIPAHIAIIMDGNGRWAKKRSLPRIAGHHEGMKVVKRVTKLASQLGVKVLTLYAFS 85
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+ L+KL + FL L + N++V++IG+ +L +++A T
Sbjct: 86 TENWKRPKMEVDFLMKLPEEFLNTYLPELIEENVQVKIIGDESALPSHTYRAIEKAVKDT 145
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N GL L A NY R EI A K + + ++SG++ D+D +L + +L T + DP+L
Sbjct: 146 EQNDGLILNFALNYGGRTEIVNAAKALAEQVKSGTLNIEDIDEALFSGHLMTESLQDPEL 205
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE RLS+F+LWQVAYSEFVF WPDF + F A+ ++ R RRFGG+
Sbjct: 206 LIRTSGEIRLSNFMLWQVAYSEFVFTDVLWPDFKEDHFLQAVGEFQQRGRRFGGI 260
>gi|332359312|gb|EGJ37133.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sanguinis
SK49]
Length = 249
Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats.
Identities = 105/235 (44%), Positives = 144/235 (61%), Gaps = 4/235 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P HI +IMDGNGRWA R PR GH+ G+E ++ AA E+G++ LT++AFS NW
Sbjct: 15 NVPKHIAVIMDGNGRWAKKRMQPRVFGHKAGMETLQKVTIAAKEMGVQVLTVYAFSTENW 74
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+S ++ L F + L KNN+K+++IG+ L L++AE T+LNT
Sbjct: 75 SRPEKEVSFIMNLPVEFYDRYVPELHKNNVKIQMIGDTAKLPKATFEALEKAESLTKLNT 134
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDL 184
GL L A NY R EI++A+K I QD+ + D+ +I YL TS++P DPDL
Sbjct: 135 GLILNFALNYGGRYEINQAVKLIAQDVLDAKLSPGDITEEVIGNYLYTSNLPKMLRDPDL 194
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE RLS+FL WQ AYSE F WPDF A+ +Y+ R+RRFGG+
Sbjct: 195 VIRTSGELRLSNFLPWQSAYSELYFTDILWPDFDENTLKTAIAEYSRRNRRFGGV 249
>gi|282858896|ref|ZP_06268036.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella bivia
JCVIHMP010]
gi|282588278|gb|EFB93443.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella bivia
JCVIHMP010]
Length = 291
Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats.
Identities = 98/248 (39%), Positives = 149/248 (60%), Gaps = 8/248 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M ++ + P+HI IIMDGNGRWA R LPR GH+ G+E I A E+G+K LT+
Sbjct: 40 MEKTLDMTRIPEHIAIIMDGNGRWAQKRNLPRTEGHKAGVETVRRITKACGELGVKYLTL 99
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW RP E+S L+ L+ S L+ KN+ +++VIG+ L ++ L++
Sbjct: 100 YTFSTENWNRPSEEVSTLMGLVLSSLEDEI--FMKNDARLQVIGDIERLPKEVQTALQQT 157
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCS------HDVDSSLIAKYL 174
+ T+ N L L +A +YSSR EI++A ++I +++ ++ + I+K+L
Sbjct: 158 INNTKNNKSLTLVVALSYSSRWEITKATQDIALELQQQNIQLTADNIKEYITEDTISKHL 217
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
T+ +P+PDL+IRTGGE R+S++LLWQ+AYSE F +WPDFS + A+ Y R R
Sbjct: 218 TTAFMPEPDLLIRTGGELRISNYLLWQIAYSELYFCDTFWPDFSEKDLHQAIADYQRRQR 277
Query: 235 RFGGLSKK 242
RFG +
Sbjct: 278 RFGKTGNQ 285
>gi|170076733|ref|YP_001733371.1| undecaprenyl diphosphate synthase [Synechococcus sp. PCC 7002]
gi|169884402|gb|ACA98115.1| undecaprenyl diphosphate synthase [Synechococcus sp. PCC 7002]
Length = 245
Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats.
Identities = 93/240 (38%), Positives = 139/240 (57%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ A + P HI +IMDGNGRW RGLPR GH+KG++ ++ + GI LT+
Sbjct: 5 LPADLDPQKLPKHIAVIMDGNGRWGQQRGLPRIMGHQKGVDTIRNMLTYCQDWGIHALTV 64
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NWRRP +E+ L+ L + L++ I++R +G+ SL + ++ +
Sbjct: 65 YAFSTENWRRPPTEVEFLMTLFEKVLRREIKIWAAKGIQIRFVGDLTSLPYSLQAEIQRS 124
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
QT+ N G+ +A NY R E+ +A + I + +G + D++ +LI +L T +P
Sbjct: 125 VIQTQHNNGIQFTVATNYGGRQELVQACRAIATKVAAGELRPSDINETLINDHLYTHGIP 184
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GE RLS+FLLWQ+AYSE P WPDF + AL + R+RRFG +
Sbjct: 185 DPDLLIRTSGEMRLSNFLLWQMAYSEIYVTPTLWPDFDKTELHRALLAFQQRERRFGKAT 244
>gi|254829928|ref|ZP_05234583.1| hypothetical protein Lmon1_01165 [Listeria monocytogenes 10403S]
Length = 252
Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats.
Identities = 101/231 (43%), Positives = 139/231 (60%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ IIMDGNGRWA R LPR AGH++G++V + A + I LT++AFS NW
Sbjct: 22 PIPRHVAIIMDGNGRWAKKRFLPRIAGHKEGMDVVKRVTRYANAISIDVLTLYAFSTENW 81
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP E+ L+KL F L + N++V V+G R +L D + +++A T T
Sbjct: 82 KRPTDEVDFLMKLPVEFFDSFVPELIEENVRVNVMGYRENLPDHTMRAVEKAIADTAHCT 141
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL L A NY R EI A K +++E + D+ + +L +S + DPDL+IRT
Sbjct: 142 GLTLNFALNYGGRSEIITAAKEAMKELELEGKSADDLTEEKLNDHLMSSGLGDPDLLIRT 201
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE RLS+F+LWQ+AYSEF F +WPDFS+E F A+ +Y R RRFGGL
Sbjct: 202 SGELRLSNFMLWQLAYSEFYFTDTHWPDFSKEDFLQAIIEYQNRSRRFGGL 252
>gi|291536045|emb|CBL09157.1| undecaprenyl diphosphate synthase [Roseburia intestinalis M50/1]
Length = 237
Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats.
Identities = 114/235 (48%), Positives = 158/235 (67%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ II+DGNGRWA ++G+PR GH G + + AA ++GIK LT++AFS NW
Sbjct: 2 KIPQHVAIILDGNGRWAKSKGMPRNYGHTVGAKNVETVCKAAHDMGIKYLTMYAFSTENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E++ L+KL++S+LK + KNN++VRVIG+ L + E E + N
Sbjct: 62 NRPEGEVAALMKLLESYLKNCIKTADKNNMRVRVIGDTTRLSARFQKQIVELEAASAKND 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GLNL IA NY SRDE+ RA+K + QD+E+G+ +++ L A YLDT+ +PDPDL+IRT
Sbjct: 122 GLNLQIAINYGSRDEMIRAMKKMCQDMENGTRQVSELNEDLFASYLDTAGIPDPDLLIRT 181
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
GE+RLS++LLWQ+AYSEF F WPDF +E A+ YN RDRRFGGL+++
Sbjct: 182 SGEQRLSNYLLWQLAYSEFYFTDVPWPDFGKEELEKAVEAYNKRDRRFGGLAEEA 236
>gi|13470839|ref|NP_102408.1| undecaprenyl pyrophosphate synthetase [Mesorhizobium loti
MAFF303099]
gi|42559868|sp|Q98MB9|UPPS_RHILO RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|14021582|dbj|BAB48194.1| undecaprenyl pyrophosphate synthetase [Mesorhizobium loti
MAFF303099]
Length = 244
Score = 299 bits (765), Expect = 2e-79, Method: Composition-based stats.
Identities = 116/232 (50%), Positives = 156/232 (67%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA ARG+PR AGHR G+E + V AA ++GI LT++AFS NW R
Sbjct: 4 PAHVAIIMDGNGRWAKARGMPRLAGHRAGVEALRKTVRAAPDLGISFLTVYAFSSENWSR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+S+L+ L+K F+++ L ++ ++VR+IG+R L DI +L+EAE T N L
Sbjct: 64 PKAEVSDLMGLLKLFIRRDLAELHQSGVRVRIIGDRAGLQADIRGLLEEAESLTARNESL 123
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IAFNY RDEI R + + G + + + + A LDT +PDP+L+IRT G
Sbjct: 124 TLVIAFNYGGRDEIVRTARKLASAAARGEIDAESITADSFAGGLDTQGIPDPELVIRTSG 183
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E RLS+FLLWQ AYSE VF+P YWPDFSRE AL ++ R+RRFGGL ++
Sbjct: 184 ELRLSNFLLWQAAYSELVFLPCYWPDFSREHLAEALREFAGRERRFGGLGQQ 235
>gi|157413563|ref|YP_001484429.1| undecaprenyl pyrophosphate synthase [Prochlorococcus marinus str.
MIT 9215]
gi|157388138|gb|ABV50843.1| Undecaprenyl pyrophosphate synthetase (UPPS) [Prochlorococcus
marinus str. MIT 9215]
Length = 267
Score = 299 bits (765), Expect = 2e-79, Method: Composition-based stats.
Identities = 88/240 (36%), Positives = 134/240 (55%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + P H+ IIMDGNGRWA +GLPR GH++G+ V +I+ AA +G K +T+
Sbjct: 14 LLMKIDKQKLPKHVAIIMDGNGRWATRKGLPRSFGHKQGVSVLKKILKAAKNLGCKVITV 73
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP E+ L+ L LK + + + K++ IG+ ++ ++ A
Sbjct: 74 YAFSTENWTRPTKEVDFLLNLFSEVLKNEIEEIHEESTKIKFIGDLTPFPKNLKEIISNA 133
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E T+ N + NY R EI +A K + +G + +++ L L T +
Sbjct: 134 ESLTKNNNKFLFNVCVNYGGRQEIVKAAKKLALKSSTGEIKPSEINEELFNSELLTGGIK 193
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DP+L+IRT GEKR+S+FLLWQ+AYSE WP+F+ F A+ Y R+RRFGG+
Sbjct: 194 DPELLIRTSGEKRISNFLLWQLAYSEIYISDVLWPEFNEHEFLKAIIDYQSRNRRFGGIE 253
>gi|329964679|ref|ZP_08301733.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides fluxus YIT
12057]
gi|328525079|gb|EGF52131.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides fluxus YIT
12057]
Length = 244
Score = 299 bits (765), Expect = 3e-79, Method: Composition-based stats.
Identities = 101/240 (42%), Positives = 144/240 (60%), Gaps = 2/240 (0%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ + P H+ IIMDGNGRWA RG R GH+ G E + I AA +G+K LT++
Sbjct: 5 EEIDLNRIPQHVAIIMDGNGRWAKQRGHERSYGHQAGAETVHIIAEEAARLGVKYLTLYT 64
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RP E++ L+ L+ +++ + KNNI RVIG+ L ++ L +
Sbjct: 65 FSTENWNRPSDEVAALMGLLFDSIEEE--TFMKNNISFRVIGDIEKLPVNVQQRLNTCME 122
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTG+ L +A +YSS EI+ A + I ++ G + ++S LI+++L T+ +PDP
Sbjct: 123 HTSQNTGMCLVLALSYSSHWEITEASRQIAILVQQGKLTPDQINSELISQHLTTNFMPDP 182
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL+IRTGGE RLS++LLWQ AYSE F YWPDF E A+ Y R+RRFG S++
Sbjct: 183 DLLIRTGGEIRLSNYLLWQAAYSELYFCDTYWPDFREEELCKAICDYQKRERRFGKTSEQ 242
>gi|116495064|ref|YP_806798.1| undecaprenyl pyrophosphate synthase [Lactobacillus casei ATCC 334]
gi|116105214|gb|ABJ70356.1| Undecaprenyl pyrophosphate synthetase [Lactobacillus casei ATCC
334]
Length = 250
Score = 299 bits (765), Expect = 3e-79, Method: Composition-based stats.
Identities = 106/241 (43%), Positives = 144/241 (59%), Gaps = 3/241 (1%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P HI IIMDGNGRWA R PR AGH++G++ I AA+ +G+K LT++AF
Sbjct: 10 KLDPARIPAHIAIIMDGNGRWAKRRFFPRVAGHKQGMQNVKTITKAASRLGVKVLTLYAF 69
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP SE++ L++L F L K N+KV V+G L ++A
Sbjct: 70 STENWKRPGSEVNYLMRLPVDFFNDFMPDLIKENVKVEVMGELDDLPPQTRQASEKAMAD 129
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT---SDVP 180
T NTG+ L A NY RDE+ A + + + ++ G + D+D A L T D+
Sbjct: 130 TANNTGMILNFALNYGGRDELVHAAQKLAKQVQEGELSPDDIDDRHFANALMTGFLGDLA 189
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GE R+S+FLLWQ+AYSE VF+ +YWPDFS A+ +Y RDRRFGGL
Sbjct: 190 DPDLLIRTSGELRISNFLLWQIAYSELVFVDDYWPDFSPAALETAIAEYQARDRRFGGLK 249
Query: 241 K 241
K
Sbjct: 250 K 250
>gi|327462763|gb|EGF09085.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sanguinis
SK1057]
Length = 249
Score = 299 bits (765), Expect = 3e-79, Method: Composition-based stats.
Identities = 104/235 (44%), Positives = 144/235 (61%), Gaps = 4/235 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P HI +IMDGNGRWA R PR GH+ G+E ++ AA E+G++ LT++AFS NW
Sbjct: 15 NVPKHIAVIMDGNGRWAKKRMQPRVFGHKAGMETLQKVTIAAKEMGVQVLTVYAFSTENW 74
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+S ++ L F + L KN +K+++IG+ L L++AE T+LNT
Sbjct: 75 SRPEKEVSFIMNLPVEFYDRYVPELHKNKVKIQMIGDTAKLPKATFEALEKAESLTKLNT 134
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDL 184
GL L A NY R EI++A+K I QD+ + D+ +I YL TS++P DPDL
Sbjct: 135 GLILNFALNYGGRYEINQAVKLIAQDVLDAKLSPGDITEEVIGNYLYTSNLPKMLRDPDL 194
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE RLS+FL WQ AYSE F WPDF + A+ +Y+ R+RRFGG+
Sbjct: 195 VIRTSGELRLSNFLPWQSAYSELYFTDILWPDFDEKALKAAIAEYSRRNRRFGGV 249
>gi|308233715|ref|ZP_07664452.1| undecaprenyl diphosphate synthase [Atopobium vaginae DSM 15829]
gi|328944063|ref|ZP_08241528.1| di-trans,poly-cis-decaprenylcistransferase [Atopobium vaginae DSM
15829]
gi|327492032|gb|EGF23806.1| di-trans,poly-cis-decaprenylcistransferase [Atopobium vaginae DSM
15829]
Length = 259
Score = 299 bits (765), Expect = 3e-79, Method: Composition-based stats.
Identities = 98/238 (41%), Positives = 146/238 (61%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
++ + + P H+ IIMDGNGRWA ARGL R GH+ G+ EIV A+ +GIK L+++
Sbjct: 20 LSDISLNRLPSHVSIIMDGNGRWAQARGLDRALGHKAGVSSLKEIVTASVRLGIKVLSVY 79
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E++ L+ L + L K + N+++R GN +L V K+
Sbjct: 80 AFSTENWKRPQHEVTLLMHLFATTLVKELPLFAQENVRLRFFGNIDALPATTRKVFKQGL 139
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
QT+ NTG+ +A NY R ++ +A ++I ++ G + D+D +++ YL TS +PD
Sbjct: 140 QQTQHNTGMVFALAVNYGGRYDLVQAAQSIATQVQDGKLKPSDIDEEVLSSYLYTSGLPD 199
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDL+IRT GE RLS++LL+Q+AYSE WPDF++ F A+ Y R RRFGG+
Sbjct: 200 PDLVIRTSGEMRLSNYLLYQIAYSELYITKTLWPDFTKWDFLRAIKSYQERTRRFGGV 257
>gi|319940265|ref|ZP_08014617.1| undecaprenyl diphosphate synthase [Streptococcus anginosus
1_2_62CV]
gi|319810567|gb|EFW06903.1| undecaprenyl diphosphate synthase [Streptococcus anginosus
1_2_62CV]
Length = 249
Score = 299 bits (765), Expect = 3e-79, Method: Composition-based stats.
Identities = 108/234 (46%), Positives = 143/234 (61%), Gaps = 4/234 (1%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HIGIIMDGNGRWA R PR GH+ G+E + AA E+G++ LT++AFS NW
Sbjct: 16 IPKHIGIIMDGNGRWAKKRMQPRVFGHKSGMETLQNVTIAAKELGVQVLTVYAFSTENWS 75
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+S ++ L F + L +NN+K+++IG+ L L +AE+ TRLNTG
Sbjct: 76 RPQKEVSFIMNLPVEFYDRYVPELHRNNVKIQMIGDTEQLPKATYDALCKAEELTRLNTG 135
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLI 185
L L A NY R EI +A+K I QD+ ++D +IA YL TS +P DPDL+
Sbjct: 136 LILNFALNYGGRAEIVQAVKMIAQDVLDAKFSPGEIDEEIIANYLQTSSLPRLLRDPDLV 195
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRT GE RLS+FL WQ AYSE F WPDF + A+ +Y+ R+RRFGG+
Sbjct: 196 IRTSGELRLSNFLPWQSAYSELYFTDILWPDFDEKALKAAIEEYSKRNRRFGGV 249
>gi|319783667|ref|YP_004143143.1| undecaprenyl diphosphate synthase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317169555|gb|ADV13093.1| undecaprenyl diphosphate synthase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 244
Score = 299 bits (765), Expect = 3e-79, Method: Composition-based stats.
Identities = 118/232 (50%), Positives = 154/232 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA ARGLPR AGHR G+E + V AA +GI LT++AFS NW R
Sbjct: 4 PAHVAIIMDGNGRWAKARGLPRLAGHRAGVEALRKTVRAAPGLGISYLTVYAFSSENWSR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE+S+L+ L+K F+++ L ++ ++VR+IG+R L DI +L EAE T N L
Sbjct: 64 PKSEVSDLMGLLKMFIRRDLAELHQSGVRVRIIGDRAGLQPDIRGLLDEAETLTAANESL 123
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IAFNY RDEI R + + + G + + + + A LDT +PDP+L+IRT G
Sbjct: 124 TLVIAFNYGGRDEIVRTAQKLALAVARGELDAEAISAESFAVALDTQGIPDPELVIRTSG 183
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E RLS+FLLWQ AYSE VF+P YWPDFSRE AL ++ R+RRFGGL +
Sbjct: 184 ELRLSNFLLWQAAYSELVFLPCYWPDFSREHLAEALREFAGRERRFGGLGGQ 235
>gi|312131844|ref|YP_003999184.1| undecaprenyl diphosphate synthase [Leadbetterella byssophila DSM
17132]
gi|311908390|gb|ADQ18831.1| undecaprenyl diphosphate synthase [Leadbetterella byssophila DSM
17132]
Length = 240
Score = 299 bits (765), Expect = 3e-79, Method: Composition-based stats.
Identities = 92/238 (38%), Positives = 145/238 (60%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + ++ P H+ +IMDGNGRWA +RG R GH+ GI+ E V AE+GIK LT++
Sbjct: 1 MEEISLNNLPKHVAVIMDGNGRWAKSRGALRIFGHQHGIKAVRETVEGCAELGIKYLTLY 60
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
FS NW RP +E+ ++ L+ + L KNN++++ IG+ +L D +++
Sbjct: 61 TFSTENWGRPKAEVDGIMDLLVKTIGDEVPRLHKNNVRLQCIGDMDALPDSARKNMEKGI 120
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ T NTGL L IA +YS + +I + K + +++ G + + D+D +L ++YL T PD
Sbjct: 121 ETTAGNTGLVLNIALSYSGKWDILQVSKKLATEVKEGKIQASDIDETLFSQYLSTFPAPD 180
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DL+IRTGG+ R+S++LLWQ AY+E +F+ WPDF + A+ + RDRRFG
Sbjct: 181 VDLLIRTGGDHRISNYLLWQSAYAELLFLDILWPDFRKSHLLDAIKSFQTRDRRFGKT 238
>gi|261493561|ref|ZP_05990081.1| di-trans,poly-cis-decaprenylcistransferase [Mannheimia haemolytica
serotype A2 str. BOVINE]
gi|261495399|ref|ZP_05991847.1| di-trans,poly-cis-decaprenylcistransferase [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261308904|gb|EEY10159.1| di-trans,poly-cis-decaprenylcistransferase [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261310743|gb|EEY11926.1| di-trans,poly-cis-decaprenylcistransferase [Mannheimia haemolytica
serotype A2 str. BOVINE]
Length = 237
Score = 299 bits (765), Expect = 3e-79, Method: Composition-based stats.
Identities = 94/236 (39%), Positives = 142/236 (60%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ + P H+ IIMDGNGRWA +G R GH+ G++ V+ AA+ I+ LT++A
Sbjct: 1 MNFDPQNMPKHVAIIMDGNGRWAKQKGKLRIFGHQNGVKAVRSAVSFAAKHHIQVLTLYA 60
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RP +E+S L+ L L L KNNI++++IG++ + +++ + E+E
Sbjct: 61 FSSENWSRPETEVSALMSLFMKALDSEVKKLHKNNIRLKIIGDKSAFSENLQKRIAESEK 120
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTGL L IA NY +I +A + + ++S + + +L ++L T + P
Sbjct: 121 LTENNTGLILNIAANYGGYWDIVQAAQQLAVHVKSEQLAVEQITPALFQQHLVTENQPQV 180
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DL+IRT GE+R+S+FLLWQ+AY+E F P WPDF+ E F A+ Y R+RRFGG
Sbjct: 181 DLLIRTSGEQRISNFLLWQIAYAELFFSPVLWPDFNDEAFSDAIYAYQQRERRFGG 236
>gi|82750861|ref|YP_416602.1| undecaprenyl pyrophosphate synthase [Staphylococcus aureus RF122]
gi|82656392|emb|CAI80811.1| undecaprenyl pyrophosphate synthetase [Staphylococcus aureus RF122]
Length = 256
Score = 299 bits (765), Expect = 3e-79, Method: Composition-based stats.
Identities = 103/240 (42%), Positives = 150/240 (62%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ SS+ P+HI IIMDGNGRWA R +PR GH +G++ +I A+++G+K LT++A
Sbjct: 17 EELDSSNIPEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITRVASDIGVKYLTLYA 76
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RP SE++ ++ L +FLK L + N+KV IG L + + A+
Sbjct: 77 FSTENWSRPESEVNYIMNLPVNFLKTFLSELIEKNVKVETIGFTDKLPKSTIEAINNAKA 136
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
+T NTGL L A NY R E+ +IKN+F ++ + S +D + I +L T D PDP
Sbjct: 137 KTANNTGLKLIFAINYGGRAELVHSIKNMFDELHQQGLNSDIIDETYINNHLMTKDYPDP 196
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+L+IRT GE+R+S+FL+WQV+YSEF+F + WPDF + + Y R RRFGGLS++
Sbjct: 197 ELLIRTSGEQRISNFLIWQVSYSEFIFNQKLWPDFDEDELIKCIKIYQSRQRRFGGLSEE 256
>gi|257414170|ref|ZP_04745452.2| di-trans,poly-cis-decaprenylcistransferase [Roseburia intestinalis
L1-82]
gi|257200995|gb|EEU99279.1| di-trans,poly-cis-decaprenylcistransferase [Roseburia intestinalis
L1-82]
gi|291538538|emb|CBL11649.1| undecaprenyl diphosphate synthase [Roseburia intestinalis XB6B4]
Length = 255
Score = 299 bits (765), Expect = 3e-79, Method: Composition-based stats.
Identities = 114/239 (47%), Positives = 161/239 (67%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+++ P H+ II+DGNGRWA ++G+PR GH G + + AA ++GIK LT++AFS
Sbjct: 16 VITMKIPQHVAIILDGNGRWAKSKGMPRNYGHTVGAKNVETVCKAAHDMGIKYLTMYAFS 75
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP E++ L+KL++S+LK + KNN++VRVIG+ L + E E +
Sbjct: 76 TENWNRPEGEVAALMKLLESYLKNCIKTADKNNMRVRVIGDTTRLSARFQKQIVELEAAS 135
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N GLNL IA NY SRDE+ RA+K + QD+E+G+ +++ L A YLDT+ +PDPDL
Sbjct: 136 AKNDGLNLQIAINYGSRDEMIRAMKKMCQDMENGTRQVSELNEDLFASYLDTAGIPDPDL 195
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
+IRT GE+RLS++LLWQ+AYSEF F WPDF +E A+ YN RDRRFGGL+++
Sbjct: 196 LIRTSGEQRLSNYLLWQLAYSEFYFTDVPWPDFGKEELEKAVEAYNKRDRRFGGLAEEA 254
>gi|292492492|ref|YP_003527931.1| undecaprenyl diphosphate synthase [Nitrosococcus halophilus Nc4]
gi|291581087|gb|ADE15544.1| undecaprenyl diphosphate synthase [Nitrosococcus halophilus Nc4]
Length = 252
Score = 299 bits (765), Expect = 3e-79, Method: Composition-based stats.
Identities = 101/239 (42%), Positives = 147/239 (61%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ SS P H+ IIMDGNGRWA R PR GHR G+E EI+ A G++ LT+FAF
Sbjct: 7 EVRSSKIPRHVAIIMDGNGRWAKQRNRPRFYGHRAGVEAVEEILQACTNAGVQVLTLFAF 66
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP E+ L+ L KS L L++ N+++R+IG+R L +++ + +AE
Sbjct: 67 SSENWHRPSQEVQLLMDLFKSALSSRLDRLQEWNVRLRIIGDRNGLSEELRSEIAKAEAL 126
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T N G+ L +A NY R +I++A K + +E+ + S + + A +L +D+P+PD
Sbjct: 127 TATNKGITLVVAANYGGRWDITQAAKQVAVKVENKQMTSDSITPEVFAAHLSIADLPEPD 186
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L IRTGGE+R+S+FLLWQ+AY+EF F WPDF + F A+ + R+RRFG S +
Sbjct: 187 LFIRTGGEQRVSNFLLWQLAYTEFYFTDILWPDFDKTAFAVAIETFLQRERRFGRTSDQ 245
>gi|260767821|ref|ZP_05876756.1| undecaprenyl pyrophosphate synthetase [Vibrio furnissii CIP 102972]
gi|260617330|gb|EEX42514.1| undecaprenyl pyrophosphate synthetase [Vibrio furnissii CIP 102972]
gi|315179349|gb|ADT86263.1| undecaprenyl diphosphate synthase [Vibrio furnissii NCTC 11218]
Length = 250
Score = 298 bits (764), Expect = 3e-79, Method: Composition-based stats.
Identities = 97/240 (40%), Positives = 151/240 (62%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ + S P HI IIMDGNGRWA A+G PR GH+ G+ + ++ AA++GIK +T+FA
Sbjct: 4 SQLSSDVLPQHIAIIMDGNGRWAKAQGKPRVFGHKNGVAAVRKTISTAAKLGIKAVTLFA 63
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP E+ L++L + L L KNN+++R+IG++ + + + AE
Sbjct: 64 FSSENWRRPEEEVGVLMELFITVLSTEVKKLHKNNLRLRIIGDKSRFSERLQAKIAHAEA 123
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTGL + IA NY + +I++A ++I + G + D+D +LI ++L +D+P+
Sbjct: 124 LTANNTGLVVNIAANYGGKWDITQAARDIAVKVARGEISPTDIDEALITEHLTMADIPEV 183
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL+IRT GE R+S+F+LWQ+AY+E F P YWP+F + A+ + R+RRFG ++
Sbjct: 184 DLLIRTSGECRISNFMLWQLAYAEMYFTPVYWPEFGEDSLIEAVTWFVNRERRFGCTGEQ 243
>gi|254526616|ref|ZP_05138668.1| undecaprenyl pyrophosphate synthetase 1 [Prochlorococcus marinus
str. MIT 9202]
gi|221538040|gb|EEE40493.1| undecaprenyl pyrophosphate synthetase 1 [Prochlorococcus marinus
str. MIT 9202]
Length = 267
Score = 298 bits (764), Expect = 3e-79, Method: Composition-based stats.
Identities = 87/240 (36%), Positives = 133/240 (55%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + P H+ IIMDGNGRWA +GLPR GH++G+ V +I+ AA +G K +T+
Sbjct: 14 LLMRIDKQKLPKHVAIIMDGNGRWATRKGLPRSFGHKQGVSVLKKILKAAKNLGCKVITV 73
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP E+ L+ L LK + + + K++ IG+ + ++ A
Sbjct: 74 YAFSTENWTRPTKEVDFLLNLFSEVLKNEIEEIHEESTKIKFIGDLTPFPKKLKEIISNA 133
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E T+ N + NY R EI +A K + +G + +++ L L T +
Sbjct: 134 ESLTKNNNKFLFNVCVNYGGRQEIVKAAKKLALKSSTGEIKPSEINEELFNSELLTGGIK 193
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DP+L+IRT GEKR+S+FLLWQ+AYSE WP+F+ F A+ + R+RRFGG+
Sbjct: 194 DPELLIRTSGEKRISNFLLWQLAYSEIYISDVLWPEFNEHEFLKAIIDFQSRNRRFGGIE 253
>gi|218245019|ref|YP_002370390.1| undecaprenyl pyrophosphate synthase [Cyanothece sp. PCC 8801]
gi|218165497|gb|ACK64234.1| undecaprenyl diphosphate synthase [Cyanothece sp. PCC 8801]
Length = 249
Score = 298 bits (764), Expect = 4e-79, Method: Composition-based stats.
Identities = 90/231 (38%), Positives = 138/231 (59%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P+H+ +IMDGNGRWA RGLPR GH++G++ +++ + G+ LT +AFS NW
Sbjct: 19 RLPNHVAVIMDGNGRWAKRRGLPRIMGHQRGVDTLKDLLRCCKDWGVPALTAYAFSTENW 78
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP+ E+ L+ L + L++ + + N+++R +GN L + + + T+ NT
Sbjct: 79 GRPLDEVEFLMTLFERVLRRELREMMEENVRIRFVGNLAVLPPSLQEEIARSMQDTQNNT 138
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
G++ +A NY R EI +A + I ++ G + D+D S+ +L T + PDL+IRT
Sbjct: 139 GIDFTVATNYGGRQEIVQACQAIATQVQQGLLNPQDIDESIFEDHLYTKGIAHPDLLIRT 198
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE RLS+FLLWQ+AY+E WPDF+RE F AL Y R+RRFG +
Sbjct: 199 SGEMRLSNFLLWQLAYAEIYVTQTLWPDFNREEFHQALLAYQQRERRFGKI 249
>gi|125718861|ref|YP_001035994.1| undecaprenyl pyrophosphate synthetase [Streptococcus sanguinis
SK36]
gi|125498778|gb|ABN45444.1| Undecaprenyl pyrophosphate synthetase, putative [Streptococcus
sanguinis SK36]
Length = 249
Score = 298 bits (764), Expect = 4e-79, Method: Composition-based stats.
Identities = 104/235 (44%), Positives = 143/235 (60%), Gaps = 4/235 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P HI +IMDGNGRWA R PR GH+ G+E + AA E+G++ LT++AFS NW
Sbjct: 15 NVPKHIAVIMDGNGRWAKKRMQPRVFGHKAGMETLQRVTIAAKEMGVQVLTVYAFSTENW 74
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+S ++ L F + L KN +K+++IG+ L L++AE T+LNT
Sbjct: 75 SRPEKEVSFIMNLPVEFYDRYVPELHKNKVKIQMIGDTAKLPKATFEALEKAESLTKLNT 134
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDL 184
GL L A NY R EI++A+K I QD+ + D+ +I YL TS++P DPDL
Sbjct: 135 GLILNFALNYGGRYEINQAVKLIAQDVLDAKLSPGDITEEVIGNYLYTSNLPKMLRDPDL 194
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE RLS+FL WQ AYSE F WPDF + A+ +Y+ R+RRFGG+
Sbjct: 195 VIRTSGELRLSNFLPWQSAYSELYFTDILWPDFDEKALKAAIAEYSRRNRRFGGV 249
>gi|325661705|ref|ZP_08150328.1| di-trans,poly-cis-decaprenylcistransferase [Lachnospiraceae
bacterium 4_1_37FAA]
gi|331084702|ref|ZP_08333790.1| di-trans,poly-cis-decaprenylcistransferase [Lachnospiraceae
bacterium 9_1_43BFAA]
gi|325471958|gb|EGC75173.1| di-trans,poly-cis-decaprenylcistransferase [Lachnospiraceae
bacterium 4_1_37FAA]
gi|330410796|gb|EGG90218.1| di-trans,poly-cis-decaprenylcistransferase [Lachnospiraceae
bacterium 9_1_43BFAA]
Length = 239
Score = 298 bits (764), Expect = 4e-79, Method: Composition-based stats.
Identities = 108/234 (46%), Positives = 156/234 (66%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P HI II+DGNGRWA +G+PR GH +G + I A ++G+K LT++AFS NW
Sbjct: 2 NVPQHIAIILDGNGRWAKKKGMPRNYGHAQGSKNVERICEEAYKMGVKYLTVYAFSTENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+ L+KL+++++K + +KN +KVRVIG+ LD+DI + E E+ ++ N
Sbjct: 62 NRPKGEVDALMKLLRNYMKTCLKTAEKNRMKVRVIGDLTGLDEDIRTRILELEEASKNND 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GLN IA NY SRDEI RA++ + +D + G + + + ++ YLDT +PDPDL+IRT
Sbjct: 122 GLNFQIAINYGSRDEIVRAVRTLAKDCKEGKIEAEKITEEVLESYLDTHGIPDPDLLIRT 181
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE RLS++LLWQ+AY+EF F WPDF++E A+ QYN RDRRFG ++
Sbjct: 182 SGELRLSNYLLWQLAYTEFYFTDVLWPDFTKEELRKAIEQYNRRDRRFGKTGEE 235
>gi|311068175|ref|YP_003973098.1| undecaprenyl pyrophosphate synthase [Bacillus atrophaeus 1942]
gi|310868692|gb|ADP32167.1| undecaprenyl pyrophosphate synthase [Bacillus atrophaeus 1942]
Length = 260
Score = 298 bits (764), Expect = 4e-79, Method: Composition-based stats.
Identities = 105/235 (44%), Positives = 147/235 (62%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
++ P HI IIMDGNGRWA R LPR AGH +G++V A E+G+K L+++AFS
Sbjct: 26 ILKGEIPAHIAIIMDGNGRWAKKRALPRIAGHHEGMKVVKRTTKLANELGVKVLSLYAFS 85
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+ L+KL + FL L + N++V+++G++ +L D +++A T
Sbjct: 86 TENWKRPKPEVDFLMKLPEEFLNTYLPELVEENVRVQIMGDQSTLPDHTFRAMEKAVRDT 145
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N GL L A NY R EI A K++ + ++ GS+ D+D SL + YL T + DP+L
Sbjct: 146 EQNDGLILNFALNYGGRTEIVCAAKSLAEKVKDGSLNVEDIDESLFSDYLMTESLQDPEL 205
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE RLS+F+LWQVAYSEFVF WPDF F AL ++ R RRFGG+
Sbjct: 206 LIRTSGEIRLSNFMLWQVAYSEFVFTDVLWPDFKENDFLKALGEFQQRGRRFGGI 260
>gi|77360956|ref|YP_340531.1| undecaprenyl pyrophosphate synthetase [Pseudoalteromonas
haloplanktis TAC125]
gi|76875867|emb|CAI87088.1| undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans-poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS)
[Pseudoalteromonas haloplanktis TAC125]
Length = 259
Score = 298 bits (764), Expect = 4e-79, Method: Composition-based stats.
Identities = 96/239 (40%), Positives = 143/239 (59%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ P H+ IIMDGNGRWA AR PR GH+KG++ + V ++GI++LT+FAF
Sbjct: 13 TISQQCLPKHVAIIMDGNGRWAQARNRPRVFGHKKGVDAVRQSVQFCTKLGIQSLTLFAF 72
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRRP E+ L++L L K L KNN+K+ +IG+ + + + A+
Sbjct: 73 SSENWRRPEDEVKTLMELFLFVLSKEVKKLHKNNVKLTIIGDLSRFSESLRSKVDTAQKL 132
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NTGL+L +A NY R +++ A K + + + G + D+ IA+Y+ +D +PD
Sbjct: 133 TANNTGLHLNVAANYGGRWDMANAAKQLAEQVAQGQLDPADITEERIAQYMSMADQAEPD 192
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRTGG+ R+S+FLLWQ AY+E F WPDF+ F A+ Y R+RRFG ++
Sbjct: 193 LLIRTGGDVRISNFLLWQAAYAELYFTDTLWPDFNEAAFAEAIACYVARERRFGCTGEQ 251
>gi|315222085|ref|ZP_07863995.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus anginosus
F0211]
gi|315188835|gb|EFU22540.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus anginosus
F0211]
Length = 249
Score = 298 bits (764), Expect = 4e-79, Method: Composition-based stats.
Identities = 108/234 (46%), Positives = 144/234 (61%), Gaps = 4/234 (1%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HIGIIMDGNGRWA R PR GH+ G+E + AA E+G++ LT++AFS NW
Sbjct: 16 IPKHIGIIMDGNGRWAKKRMQPRVFGHKSGMETLQNVTIAAKELGVQVLTVYAFSTENWS 75
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+S ++ L F + L +NN+K+++IG+ L L +AE+ TRLNTG
Sbjct: 76 RPEKEVSFIMNLPVEFYDRYVPELHRNNVKIQMIGDTERLPKATYEALYKAEELTRLNTG 135
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLI 185
L L A NY R EI +A+K I QD+ ++D +IA YL TS++P DPDL+
Sbjct: 136 LILNFALNYGGRAEIVQAVKMIAQDVLDAKFSPGEIDEEMIANYLQTSNLPRLLRDPDLV 195
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRT GE RLS+FL WQ AYSE F WPDF + A+ +Y+ R+RRFGG+
Sbjct: 196 IRTSGELRLSNFLPWQSAYSELYFTDILWPDFDEKALKAAIEEYSKRNRRFGGV 249
>gi|110639780|ref|YP_679990.1| undecaprenyl pyrophosphate synthetase [Cytophaga hutchinsonii ATCC
33406]
gi|110282461|gb|ABG60647.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) [Cytophaga
hutchinsonii ATCC 33406]
Length = 260
Score = 298 bits (764), Expect = 4e-79, Method: Composition-based stats.
Identities = 96/241 (39%), Positives = 145/241 (60%), Gaps = 1/241 (0%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGL-PRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + SS P+HI IIMDGNGRWA +GL R GH+ I E A++G+K LT++
Sbjct: 14 SQIDSSKLPEHIAIIMDGNGRWAKKQGLLNRIFGHKSAITSVREATETCAQLGVKYLTLY 73
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E++ L++L+ S +K +L KN I++ IG+ SL L E
Sbjct: 74 AFSTENWNRPKEEVNALMELLVSTIKSETPTLNKNKIRLNAIGDLASLPLSCQKELSETI 133
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+QT+ NTG+ L +A +YS R EI AIK + ++ S + ++ + ++L +PD
Sbjct: 134 EQTKHNTGVVLTLALSYSGRWEILEAIKKLTASVKDQSFDINSLNENTFRQFLSDKTLPD 193
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
P+L+IRT GE R+S+FLLWQ+AY+E WPDF + + A+ + R+RRFG +S+
Sbjct: 194 PELLIRTSGEFRVSNFLLWQIAYTEIHITDVLWPDFRKNDLYKAIVDFQKRERRFGKISE 253
Query: 242 K 242
+
Sbjct: 254 Q 254
>gi|78184966|ref|YP_377401.1| undecaprenyl pyrophosphate synthase [Synechococcus sp. CC9902]
gi|78169260|gb|ABB26357.1| Undecaprenyl pyrophosphate synthetase [Synechococcus sp. CC9902]
Length = 260
Score = 298 bits (763), Expect = 4e-79, Method: Composition-based stats.
Identities = 92/236 (38%), Positives = 146/236 (61%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ S+ P H+ +IMDGNGRWA ARGLPR GH+ G+E + ++ GI LT +AF
Sbjct: 20 ELDSARLPAHVAVIMDGNGRWAKARGLPRVVGHQAGVEALKSTLRQCSDWGIGALTAYAF 79
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP E++ L+ L + L+K SL++ +++R +G+ L + + ++ +A ++
Sbjct: 80 STENWSRPGDEVNFLMTLFEGVLQKELRSLEEEQVRIRFLGDLDGLPEKLQHLIDKATER 139
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T N+G++ + NY R E+ RA + + + SG++ ++D + A+ L T+ DPD
Sbjct: 140 TAKNSGIHFNVCTNYGGRRELVRAAQRLAKQAASGTLDPEEIDENSFARELFTAGDQDPD 199
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
L+IRT GE R+S+FLLWQ+AY+E +WPDF+ ++ AL Y R+RRFGGL
Sbjct: 200 LLIRTSGEYRISNFLLWQLAYAEIHVTDVFWPDFNADVLKQALLDYQGRNRRFGGL 255
>gi|193213406|ref|YP_001999359.1| undecaprenyl diphosphate synthase [Chlorobaculum parvum NCIB 8327]
gi|193086883|gb|ACF12159.1| undecaprenyl diphosphate synthase [Chlorobaculum parvum NCIB 8327]
Length = 268
Score = 298 bits (763), Expect = 4e-79, Method: Composition-based stats.
Identities = 107/232 (46%), Positives = 151/232 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA +G R GH G++ +IV A +++GI LT+F FSI NWRR
Sbjct: 27 PRHIGIIMDGNGRWAKQKGKSRIEGHIAGVDSVQDIVEACSQLGISALTLFTFSIENWRR 86
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EIS L+KL+ LKK L +NNI++ VIG+ + + L+E +QTR N L
Sbjct: 87 PKPEISALMKLLIKVLKKETPQLCENNIRLEVIGDLNLVSSTVRKTLEETIEQTRNNHEL 146
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA +YS + +I+ A + I + + +G++ +D +L A L T+ +PDP+L+IRT G
Sbjct: 147 TLTIALSYSGKWDITNACRTIAEQVANGTIAPEQIDENLFAANLSTASLPDPELLIRTSG 206
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+F+LWQ+AYSE F YWPDF R+ + AL +Y R+RRFG S++
Sbjct: 207 EFRISNFMLWQIAYSEIFFTETYWPDFRRDKLYDALREYQNRERRFGQTSEQ 258
>gi|123966416|ref|YP_001011497.1| undecaprenyl pyrophosphate synthetase [Prochlorococcus marinus str.
MIT 9515]
gi|123200782|gb|ABM72390.1| Undecaprenyl pyrophosphate synthetase (UPPS) [Prochlorococcus
marinus str. MIT 9515]
Length = 267
Score = 298 bits (763), Expect = 4e-79, Method: Composition-based stats.
Identities = 95/240 (39%), Positives = 136/240 (56%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P HI IIMDGNGRWA+ +GLPR GH KG+ V EI+ + + + LT+
Sbjct: 14 LSNEIDKLRVPKHIAIIMDGNGRWASKKGLPRSFGHNKGVNVLKEIIKVSKNLDCQVLTV 73
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP +E+ L+ L + LKK + + +IK++ IG+ + ++ +
Sbjct: 74 YAFSTENWTRPSTEVDFLINLFEKVLKKEITEIHQESIKIKFIGDLSPFPKALKSIINSS 133
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E T+ N L I NY R EI +A + I +G + ++D L L T +
Sbjct: 134 ETLTKNNKNFTLNICVNYGGRQEIVKAAREIAIKSLAGEIKPSEIDEQLFNSQLLTHGIK 193
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DP+L+IRT GEKR+S+FLLWQ+AYSE WPDF+ FF A+ Y RDRRFGG+
Sbjct: 194 DPELLIRTSGEKRISNFLLWQLAYSEIYITDVLWPDFNEIEFFKAIIDYQSRDRRFGGIQ 253
>gi|325336000|gb|ADZ12274.1| Undecaprenyl pyrophosphate synthase [Riemerella anatipestifer
RA-GD]
Length = 252
Score = 298 bits (763), Expect = 4e-79, Method: Composition-based stats.
Identities = 91/239 (38%), Positives = 137/239 (57%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P HI IIMDGNGRWA ++G R GH+ IE + A E+G+ LT++ F
Sbjct: 11 KIDKNKLPQHIAIIMDGNGRWAKSKGQERTFGHKSAIEAVRNAINACNEIGVPYLTLYTF 70
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP E+ L+ L+ L + +++ VIG+ L + L D
Sbjct: 71 STENWGRPSDEVDTLMNLLSDTLLAEAEDIFNKGLRMHVIGDVERLPSLVKDQLLNVVDL 130
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NT NL +A +Y SR EI A+K I ++++G + + I++ L T D+PD D
Sbjct: 131 TKNNTKGNLVLALSYGSRHEILTAVKKIATEVKNGELSVEAISEETISQNLFTKDIPDVD 190
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRT GE R+S+FLLWQ+AY+E F+ WPDFS++ FF + Y ++RR+G S++
Sbjct: 191 LLIRTSGEVRVSNFLLWQIAYAELQFLDVLWPDFSKDDFFQCVVDYQNKERRYGKTSEQ 249
>gi|313206552|ref|YP_004045729.1| undecaprenyl diphosphate synthase [Riemerella anatipestifer DSM
15868]
gi|312445868|gb|ADQ82223.1| undecaprenyl diphosphate synthase [Riemerella anatipestifer DSM
15868]
gi|315023452|gb|EFT36460.1| Undecaprenyl pyrophosphate synthetase [Riemerella anatipestifer
RA-YM]
Length = 248
Score = 298 bits (763), Expect = 4e-79, Method: Composition-based stats.
Identities = 91/239 (38%), Positives = 137/239 (57%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P HI IIMDGNGRWA ++G R GH+ IE + A E+G+ LT++ F
Sbjct: 7 KIDKNKLPQHIAIIMDGNGRWAKSKGQERTFGHKSAIEAVRNAINACNEIGVPYLTLYTF 66
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP E+ L+ L+ L + +++ VIG+ L + L D
Sbjct: 67 STENWGRPSDEVDTLMNLLSDTLLAEAEDIFNKGLRMHVIGDVERLPSLVKDQLLNVVDL 126
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NT NL +A +Y SR EI A+K I ++++G + + I++ L T D+PD D
Sbjct: 127 TKNNTKGNLVLALSYGSRHEILTAVKKIATEVKNGELSVEAISEETISQNLFTKDIPDVD 186
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRT GE R+S+FLLWQ+AY+E F+ WPDFS++ FF + Y ++RR+G S++
Sbjct: 187 LLIRTSGEVRVSNFLLWQIAYAELQFLDVLWPDFSKDDFFQCVVDYQNKERRYGKTSEQ 245
>gi|299142364|ref|ZP_07035496.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella oris C735]
gi|298576086|gb|EFI47960.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella oris C735]
Length = 247
Score = 298 bits (763), Expect = 4e-79, Method: Composition-based stats.
Identities = 102/242 (42%), Positives = 152/242 (62%), Gaps = 2/242 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M AS+ + P HI IIMDGNGRWA+ +G PR GH+ G++ I + A +G+K LT+
Sbjct: 1 MTASLDMTRIPKHIAIIMDGNGRWASEKGKPRSYGHQAGVDAVRRITSEATRLGVKFLTL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW RP EIS L+ L+ + L+ KNN++ RVIG+R L ++ L+E
Sbjct: 61 YTFSTENWNRPADEISALMGLVLTSLEDEI--FMKNNVRFRVIGDRKRLPAEVEQKLRET 118
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E+ T+ NT + + +A +YS+R EI +A++NI + + D+ +I+ +L+T+ +P
Sbjct: 119 EEHTKGNTAMTMVVALSYSARWEIVQAMRNILIENTDKPLQPTDITEEMISHHLETNFMP 178
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DP+L+IRTGGE R+S++LLWQ+AYSE F YWPDFS + A+ Y R RRFG
Sbjct: 179 DPELLIRTGGELRISNYLLWQIAYSELYFCDTYWPDFSEDDLQKAIQSYQNRQRRFGKTE 238
Query: 241 KK 242
+
Sbjct: 239 AQ 240
>gi|270295598|ref|ZP_06201799.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides sp. D20]
gi|270274845|gb|EFA20706.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides sp. D20]
Length = 244
Score = 298 bits (763), Expect = 5e-79, Method: Composition-based stats.
Identities = 101/240 (42%), Positives = 144/240 (60%), Gaps = 2/240 (0%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ + P H+ IIMDGNGRWA RG R GH+ G E + I AA++G++ LT++
Sbjct: 5 EEIDLNRIPQHVAIIMDGNGRWAKQRGHERSYGHQAGAETVHVIAEEAAKLGVRYLTLYT 64
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RP E++ L+ L+ +++ + KNNI RVIG+ L ++ L
Sbjct: 65 FSTENWNRPSDEVAALMGLLFDSIEEE--TFMKNNISFRVIGDIEKLPANVQQRLNTCVA 122
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTG+ L +A +YSSR EI+ A + I ++ G + +DS LI+++L T +PDP
Sbjct: 123 HTSHNTGMCLVLALSYSSRWEITEAARQIADLVQKGELKPEQIDSELISRHLTTHFMPDP 182
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL+IRTGGE RLS+++LWQ AYSE F YWPDF E A+ Y R+RRFG S++
Sbjct: 183 DLLIRTGGELRLSNYMLWQCAYSELYFCDTYWPDFREEELRKAICDYQKRERRFGKTSEQ 242
>gi|73662817|ref|YP_301598.1| undecaprenyl pyrophosphate synthase [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
gi|82582321|sp|Q49X45|UPPS_STAS1 RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|72495332|dbj|BAE18653.1| undecaprenyl pyrophosphate synthetase [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
Length = 254
Score = 298 bits (763), Expect = 5e-79, Method: Composition-based stats.
Identities = 102/235 (43%), Positives = 149/235 (63%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P+H+ IIMDGNGRWA R LPR GH +G++ +I A+++GIK LT++AFS
Sbjct: 20 LDLHNIPEHVAIIMDGNGRWAKQRKLPRIKGHYQGMQTVKKITKVASDIGIKYLTLYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP +E++ ++ L +FLK L +NN+KV IG L L + +A++ T
Sbjct: 80 TENWTRPENEVNYIMNLPVNFLKTFLPELIENNVKVETIGFMEYLPSSTLKAIAKAKEDT 139
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NTGL L A NY R EI ++K I+ ++ + + S D+ +I +L T PDPDL
Sbjct: 140 KDNTGLKLIFAINYGGRAEILNSVKTIYDELTAKGLTSDDITEQMIDDHLMTHAYPDPDL 199
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE+R+S+FL+WQV+YSEF+F + WPDF +E + + Y R RRFGGL
Sbjct: 200 LIRTSGEQRISNFLIWQVSYSEFIFNEKLWPDFDKEELINCIKIYQSRQRRFGGL 254
>gi|332291477|ref|YP_004430086.1| undecaprenyl diphosphate synthase [Krokinobacter diaphorus
4H-3-7-5]
gi|332169563|gb|AEE18818.1| undecaprenyl diphosphate synthase [Krokinobacter diaphorus
4H-3-7-5]
Length = 246
Score = 298 bits (763), Expect = 5e-79, Method: Composition-based stats.
Identities = 104/241 (43%), Positives = 151/241 (62%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+A + P HI IIMDGNGRWA +GL R GH+KG + E V AAAE+G+ LT++
Sbjct: 4 LAQINKEKLPQHIAIIMDGNGRWAKKQGLLRAVGHKKGSKAVREAVEAAAELGVPYLTLY 63
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP +E+ L+ L+ S LKK +L+ N++ + IGN SL L E
Sbjct: 64 AFSTENWNRPKAEVDTLMNLLVSSLKKEISTLQDNDVSLNTIGNTSSLPKKAQRELNEVI 123
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T+ N L L +A +Y SR+E+ + +K I +++ + ++D S I ++L T D+PD
Sbjct: 124 EKTKNNKRLKLTLALSYGSREELIKTVKEISDKVKNNLISPAEIDESCINEHLYTHDMPD 183
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRT GE+R+S+FLLWQ+AY+EF F WPDF +E A+ Y R+RRFG S+
Sbjct: 184 VDLLIRTSGEQRISNFLLWQIAYAEFYFTEILWPDFRKEHLHDAIYNYQKRERRFGKTSE 243
Query: 242 K 242
+
Sbjct: 244 Q 244
>gi|225026989|ref|ZP_03716181.1| hypothetical protein EUBHAL_01245 [Eubacterium hallii DSM 3353]
gi|224955674|gb|EEG36883.1| hypothetical protein EUBHAL_01245 [Eubacterium hallii DSM 3353]
Length = 241
Score = 298 bits (763), Expect = 5e-79, Method: Composition-based stats.
Identities = 112/230 (48%), Positives = 154/230 (66%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P+H+ II+DGNGRWA R +PR GH +G + +I A ++GIK LT++AFS NW+
Sbjct: 12 IPEHVAIILDGNGRWAKKRFMPRNYGHSQGAKTVEQICEDAWDIGIKYLTVYAFSTENWK 71
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ L+KL++ +LK KNN++VRVIG + LDDDI + E E+ + NTG
Sbjct: 72 RPEKEVKALMKLLRKYLKDCIERTAKNNMRVRVIGEKSRLDDDIRAAIDELEEVSAANTG 131
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
LN IA NY SRDE+ RA+ ++ QD + G+ ++ A YLDT D+PDPDL+IRT
Sbjct: 132 LNFTIALNYGSRDEMVRAMHHMAQDCKDGAFDPEEITEEKFASYLDTKDLPDPDLMIRTS 191
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE+RLS+++LWQ+AY+EF F WPDF +E A+ YN RDRRFGG+
Sbjct: 192 GEQRLSNWMLWQLAYAEFYFTDVLWPDFDKEELIRAVEYYNTRDRRFGGV 241
>gi|329956194|ref|ZP_08296874.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides clarus YIT
12056]
gi|328524668|gb|EGF51729.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides clarus YIT
12056]
Length = 244
Score = 298 bits (763), Expect = 5e-79, Method: Composition-based stats.
Identities = 104/240 (43%), Positives = 150/240 (62%), Gaps = 2/240 (0%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ S P H+ IIMDGNGRWA RG R GH+ G E + I A+++GIK LT++
Sbjct: 5 EELDLSRIPQHVAIIMDGNGRWAKLRGQERSFGHQAGAETVHIIAEEASKLGIKYLTLYT 64
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RP +E++ L+ L+ +++ + KNNI+ R+IG+ L ++ L+
Sbjct: 65 FSTENWNRPSNEVAALMALLFDSIEEE--TFMKNNIRFRIIGDLTKLPANVRERLETCVA 122
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTG++L +A +YSSR EI+ A + I I G + +DS+L++++L TS +PDP
Sbjct: 123 HTVNNTGMSLVLAISYSSRWEITEATRQIATLIHKGELTPGQIDSNLVSQHLTTSFMPDP 182
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL+IRTGGE RLS++LLWQ AYSE F YWPDF E + A+ Y R+RRFG S++
Sbjct: 183 DLLIRTGGEVRLSNYLLWQCAYSELYFCDTYWPDFREEELYKAIYDYQKRERRFGKTSEQ 242
>gi|166031003|ref|ZP_02233832.1| hypothetical protein DORFOR_00684 [Dorea formicigenerans ATCC
27755]
gi|166029270|gb|EDR48027.1| hypothetical protein DORFOR_00684 [Dorea formicigenerans ATCC
27755]
Length = 235
Score = 298 bits (763), Expect = 5e-79, Method: Composition-based stats.
Identities = 112/234 (47%), Positives = 165/234 (70%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P H+ II+DGNGRWA A+G+ R GH +G + +I A +GIK LT++AFS NW
Sbjct: 2 NIPQHVAIILDGNGRWAKAKGMSRNYGHAQGSKNVEKICEEAWCMGIKYLTVYAFSTENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E++ L+KL+++++K + KN++KVRVIG+ LD+DI + E E+ T+ N
Sbjct: 62 NRPKEEVNALMKLLRNYMKTCLKTAAKNDMKVRVIGDITKLDEDIQKRILELEEATKNNG 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GLN IA NY SRDEI+RA++ + +D++ G + +V+ + I +YLDT D+PDPDL+IRT
Sbjct: 122 GLNFQIAINYGSRDEITRAVRTLAEDVKEGKLMPEEVNEACIERYLDTHDIPDPDLLIRT 181
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+RLS++LLWQ+AY+EF F WPDFS++ A+ QYN RDRR+GG+ ++
Sbjct: 182 SGEQRLSNYLLWQLAYTEFYFTDVPWPDFSKQELEKAIEQYNRRDRRYGGVKEE 235
>gi|322514265|ref|ZP_08067326.1| di-trans,poly-cis-decaprenylcistransferase [Actinobacillus ureae
ATCC 25976]
gi|322119877|gb|EFX91891.1| di-trans,poly-cis-decaprenylcistransferase [Actinobacillus ureae
ATCC 25976]
Length = 237
Score = 298 bits (763), Expect = 5e-79, Method: Composition-based stats.
Identities = 97/236 (41%), Positives = 139/236 (58%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ P H+ IIMDGNGRWA +G R GH+ G++ V+ AA+ GIK LT++A
Sbjct: 1 MNFDPQKMPQHVAIIMDGNGRWAKQQGKLRVFGHQNGVKTVRSAVSFAAKHGIKVLTLYA 60
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RP +E+S L+ L L L KNNI++++IG++ + + + E+E
Sbjct: 61 FSSENWSRPEAEVSALMSLFMRALDSEVKKLHKNNIRLKIIGDKKGFSESLQKRIAESEA 120
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTGL L IA NY +I++A + + ++ G + D+ + L T + P
Sbjct: 121 LTAENTGLILNIAANYGGYWDITQAAQQLAVKVKLGEISISDITAERFQNALVTGEQPQV 180
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DL+IRT GE+R+S+FLLWQ+AY+E F P WPDF+ E F A+ Y RDRRFGG
Sbjct: 181 DLLIRTSGEQRISNFLLWQIAYAELFFSPVLWPDFNDESFSEAIIAYQQRDRRFGG 236
>gi|312114737|ref|YP_004012333.1| undecaprenyl diphosphate synthase [Rhodomicrobium vannielii ATCC
17100]
gi|311219866|gb|ADP71234.1| undecaprenyl diphosphate synthase [Rhodomicrobium vannielii ATCC
17100]
Length = 245
Score = 298 bits (763), Expect = 5e-79, Method: Composition-based stats.
Identities = 116/230 (50%), Positives = 161/230 (70%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWAA RGLPR GHR+G+E E V AAAE+GI LT+F+FS NW+R
Sbjct: 15 PKHIAIIMDGNGRWAAQRGLPRSEGHRRGVESTRECVRAAAELGISYLTLFSFSSENWKR 74
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L++ F+++ + +NNIKVRVIG+ + D+ + ++A T NTG+
Sbjct: 75 PPLEVTYLMGLLRRFIRRDLAEIHQNNIKVRVIGSEEGVPRDLFAMFRDAMALTAGNTGM 134
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IAFNY +RDEI RA K + + ++G + D+ + AK DT+ +PDPDL+IRT G
Sbjct: 135 ELIIAFNYGARDEIVRAAKRLAEQAKAGEIDPADITQEMFAKQFDTAGIPDPDLLIRTSG 194
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E+R+S+FLLWQ AYSEF+F+ +WPDF+R+ A+ Y R+RRFGGL+
Sbjct: 195 EQRISNFLLWQCAYSEFLFVDNFWPDFTRQTLESAIASYQQRERRFGGLA 244
>gi|209885088|ref|YP_002288945.1| di-trans,poly-cis-decaprenylcistransferase [Oligotropha
carboxidovorans OM5]
gi|209873284|gb|ACI93080.1| di-trans,poly-cis-decaprenylcistransferase [Oligotropha
carboxidovorans OM5]
Length = 252
Score = 298 bits (763), Expect = 5e-79, Method: Composition-based stats.
Identities = 118/236 (50%), Positives = 160/236 (67%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
++ P H+ IIMDGNGRWAAARGLPR GHR+G+E +++ AA E+GI LTIF+FS
Sbjct: 14 NAGSPRHVAIIMDGNGRWAAARGLPRAEGHRRGVEALRKVLRAAHELGISYLTIFSFSSE 73
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP SE+ +L L++ F++ SL + ++VRVIG R L+ DI +L+EAE+ TR
Sbjct: 74 NWSRPASEVGDLFALLRRFIRNDLASLHGDGVRVRVIGERDGLEPDIKALLEEAEELTRH 133
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NT L L +AFNY SR EI+ A + + +++ G + + + YLD D+PDPDLII
Sbjct: 134 NTNLTLVVAFNYGSRQEIAHAAQRLAREVADGKRDPATITADTLGSYLDAPDIPDPDLII 193
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE+RLS+FL+WQ AYSE VF+P WPDF + A+ +Y R+RRFGGL K
Sbjct: 194 RTSGEQRLSNFLMWQAAYSELVFVPTLWPDFDKAALEGAIAEYATRERRFGGLIAK 249
>gi|320155596|ref|YP_004187975.1| undecaprenyl pyrophosphate synthetase [Vibrio vulnificus MO6-24/O]
gi|319930908|gb|ADV85772.1| undecaprenyl pyrophosphate synthetase [Vibrio vulnificus MO6-24/O]
Length = 251
Score = 298 bits (763), Expect = 5e-79, Method: Composition-based stats.
Identities = 95/240 (39%), Positives = 154/240 (64%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ + + S P HI IIMDGNGRWA ++G PR GH+KG+ + +AAA+++ I+ +T+FA
Sbjct: 4 SQLFTESLPKHIAIIMDGNGRWAKSKGQPRVFGHKKGVSAVRKTIAAASKLNIQAITLFA 63
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP E+ L++L + L L+KNN+++R+IG+ + + + EA++
Sbjct: 64 FSSENWRRPEEEVGLLMELFITVLSSEVKKLRKNNLRLRIIGDTSRFSERLQKKIVEAQE 123
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTG+ + +A NY + +I++A++ + Q + G + + + IAK+L SD+P+
Sbjct: 124 LTASNTGMVINVAANYGGKWDITQAVQKVAQQVALGELSAEGITEDDIAKHLTMSDLPEV 183
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL+IRT GE R+S+F+LWQ+AY+E F P +WPDF E A+ + R+RRFG ++
Sbjct: 184 DLLIRTSGECRISNFMLWQMAYAEMYFTPVFWPDFGEESLIEAITWFVNRERRFGCTGEQ 243
>gi|302392359|ref|YP_003828179.1| undecaprenyl pyrophosphate synthetase [Acetohalobium arabaticum DSM
5501]
gi|302204436|gb|ADL13114.1| Undecaprenyl pyrophosphate synthetase [Acetohalobium arabaticum DSM
5501]
Length = 241
Score = 298 bits (763), Expect = 5e-79, Method: Composition-based stats.
Identities = 103/238 (43%), Positives = 152/238 (63%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M + P+HI +IMDGNGRWA +GL R AGH+KG++ +I+ ++ I++LT+FAFS
Sbjct: 1 METEEMPEHIAVIMDGNGRWAKEQGLSRSAGHKKGVQKLKKIIEIVNKLEIEHLTVFAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+ L++L L +++++RV+G R L ++I + E D T
Sbjct: 61 TENWKRPKKEVDFLMRLFHRTFDNEVLDLHNSDVRIRVLGRRQGLPENIKAKIDEVVDLT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N GLNL IA NY R EI A K++ +++G+V D+D ++ L T+D+PDP+L
Sbjct: 121 NKNQGLNLNIALNYGGRSEIIDAAKSLAAKVKNGTVKLDDIDEEELSNELYTADIPDPEL 180
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IR GEKR+S+FLLWQ AY+EF F YWP+F +E A+ +Y R+RRFGGL +K
Sbjct: 181 LIRPSGEKRISNFLLWQSAYAEFWFTDTYWPEFDKEELLEAIAEYQRRERRFGGLKEK 238
>gi|323343632|ref|ZP_08083859.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella oralis ATCC
33269]
gi|323095451|gb|EFZ38025.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella oralis ATCC
33269]
Length = 251
Score = 298 bits (762), Expect = 5e-79, Method: Composition-based stats.
Identities = 100/239 (41%), Positives = 149/239 (62%), Gaps = 2/239 (0%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P HI IIMDGNGRWAA +G PR GH+ G++ I + +G+K LT++ F
Sbjct: 5 KIDMERIPRHIAIIMDGNGRWAAEQGKPRSFGHQAGVDTVRRITSECTRLGVKYLTLYTF 64
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP EIS L+ L+ S L+ KNN++ RVIG+ L +D+ L+E E+
Sbjct: 65 STENWNRPADEISALMGLVLSSLEDEI--FMKNNVRFRVIGDVSRLPEDVQRKLRETEEH 122
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T N + + +A +YSSR EI++A+++I ++ +G++ D+D +++ L T+ +PDPD
Sbjct: 123 TAANKNMTMVVALSYSSRWEIAKAVRHIAKEAVAGNINVDDIDEETVSRELSTNFMPDPD 182
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRTGGE R+S++LLWQ+AYSE F YWPDF +E A+ Y R RR+G +
Sbjct: 183 LLIRTGGELRISNYLLWQIAYSELYFCDTYWPDFDKEDLHKAILSYQKRQRRYGRTEDQ 241
>gi|295132496|ref|YP_003583172.1| undecaprenyl-pyrophosphate synthetase [Zunongwangia profunda
SM-A87]
gi|294980511|gb|ADF50976.1| undecaprenyl-pyrophosphate synthetase [Zunongwangia profunda
SM-A87]
Length = 246
Score = 298 bits (762), Expect = 6e-79, Method: Composition-based stats.
Identities = 99/240 (41%), Positives = 153/240 (63%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
++ + P HI +IMDGNGRWA +G R GH +G++ +IV A++GIK LT++A
Sbjct: 5 ENLNLTKLPSHIAVIMDGNGRWAKKQGFLRAVGHNEGVKSVRDIVEGGAQIGIKFLTLYA 64
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RP E+ L+K++ S LKK +L+ NNIK+ IGN +L L + +
Sbjct: 65 FSTENWNRPKLEVDTLMKILVSSLKKEIKTLQDNNIKLTAIGNIDNLPKKAKRELLDVIE 124
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
+T+ N + L +A +Y SR+EI+ A+K + ++ G++ ++ SLI++ L T D+PD
Sbjct: 125 KTKHNAKMTLILALSYGSREEITSAVKALANKVKEGTLEPDKINDSLISESLYTKDIPDV 184
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL+IRT GE+R+S+FLLWQ+AY+E F WPDF ++ + A+ Y R+RRFG S++
Sbjct: 185 DLMIRTSGEQRISNFLLWQMAYAELYFTSILWPDFRKDNLYEAIYNYQNRERRFGKTSEQ 244
>gi|307942146|ref|ZP_07657497.1| undecaprenyl pyrophosphate synthetase 1 [Roseibium sp. TrichSKD4]
gi|307774432|gb|EFO33642.1| undecaprenyl pyrophosphate synthetase 1 [Roseibium sp. TrichSKD4]
Length = 255
Score = 298 bits (762), Expect = 6e-79, Method: Composition-based stats.
Identities = 112/234 (47%), Positives = 155/234 (66%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ IMDGNGRWA +RGL R GHR+G+E +V A ++G++ +T F+FS NW
Sbjct: 20 PLPKHVAFIMDGNGRWAKSRGLARTEGHRRGLEALRGVVRHAGKIGVEVVTFFSFSSENW 79
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RRP E+S L+ L++ F+++ L + N+++R+IG R L+ I +L+EAE T+ NT
Sbjct: 80 RRPQQEVSFLMTLLRRFMQRDLSELHEANVRIRIIGEREDLEPGIRSLLEEAESLTKDNT 139
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL L +AFNY SRDEI RA + + + +G + + + +++ LDTS +PDPDL+IRT
Sbjct: 140 GLTLVVAFNYGSRDEIVRAARKLSLKVAAGELTADQITEDAVSEALDTSGLPDPDLLIRT 199
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE RLS+FLLWQ AY+EF F P WPDF F A+ Y RDRRFGGLS K
Sbjct: 200 SGEIRLSNFLLWQSAYTEFHFSPLNWPDFDETAFDRAIADYCGRDRRFGGLSAK 253
>gi|281417719|ref|ZP_06248739.1| undecaprenyl diphosphate synthase [Clostridium thermocellum JW20]
gi|281409121|gb|EFB39379.1| undecaprenyl diphosphate synthase [Clostridium thermocellum JW20]
Length = 252
Score = 298 bits (762), Expect = 6e-79, Method: Composition-based stats.
Identities = 104/237 (43%), Positives = 145/237 (61%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A++ S P HI IIMDGNGRWA R LPR GHR+G ++ EI E+GIK LT++A
Sbjct: 16 ANIDYSKLPTHIAIIMDGNGRWAKKRALPRSMGHREGAKILKEITTFCGEIGIKYLTVYA 75
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW+RP SE+ L+ L+ +LK + +++++VIG+ DD+I +
Sbjct: 76 FSTENWKRPKSEVDALMSLLLDYLKNAETHIGGKDVRIQVIGDTSVFDDEIKKEIDRVTK 135
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T N GL L IA NY SR EI A K + +++ G + D++ ++ L T+ +PDP
Sbjct: 136 LTSKNNGLILNIALNYGSRAEIVHAAKRMAKEVLEGKLKPDDINEEVLNDRLYTAKIPDP 195
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DL+IR GGEKRLS+FLLWQ AY+E + WPDF +E A+ Y R+RRFGG+
Sbjct: 196 DLLIRPGGEKRLSNFLLWQSAYTELWYTDVLWPDFKKEHIVEAILDYQRRNRRFGGI 252
>gi|160888036|ref|ZP_02069039.1| hypothetical protein BACUNI_00444 [Bacteroides uniformis ATCC 8492]
gi|317478582|ref|ZP_07937739.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides sp. 4_1_36]
gi|156862535|gb|EDO55966.1| hypothetical protein BACUNI_00444 [Bacteroides uniformis ATCC 8492]
gi|316905223|gb|EFV27020.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides sp. 4_1_36]
Length = 245
Score = 298 bits (762), Expect = 6e-79, Method: Composition-based stats.
Identities = 101/240 (42%), Positives = 144/240 (60%), Gaps = 2/240 (0%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ + P H+ IIMDGNGRWA RG R GH+ G E + I AA++G++ LT++
Sbjct: 6 EEIDLNRIPQHVAIIMDGNGRWAKQRGHERSYGHQAGAETVHVIAEEAAKLGVRYLTLYT 65
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RP E++ L+ L+ +++ + KNNI RVIG+ L ++ L
Sbjct: 66 FSTENWNRPSDEVAALMGLLFDSIEEE--TFMKNNISFRVIGDIEKLPANVQQRLNTCVA 123
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTG+ L +A +YSSR EI+ A + I ++ G + +DS LI+++L T +PDP
Sbjct: 124 HTSHNTGMCLVLALSYSSRWEITEAARQIADLVQKGELKPEQIDSELISRHLTTHFMPDP 183
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL+IRTGGE RLS+++LWQ AYSE F YWPDF E A+ Y R+RRFG S++
Sbjct: 184 DLLIRTGGELRLSNYMLWQCAYSELYFCDTYWPDFREEELRKAICDYQKRERRFGKTSEQ 243
>gi|119356237|ref|YP_910881.1| undecaprenyl pyrophosphate synthetase [Chlorobium phaeobacteroides
DSM 266]
gi|119353586|gb|ABL64457.1| Undecaprenyl pyrophosphate synthetase [Chlorobium phaeobacteroides
DSM 266]
Length = 282
Score = 298 bits (762), Expect = 6e-79, Method: Composition-based stats.
Identities = 103/233 (44%), Positives = 143/233 (61%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI IIMDGNGRWA +G R GH G++ +IV A+ ++GI LT+F FS NW
Sbjct: 39 LPLHIAIIMDGNGRWAKLKGKTRIEGHIAGVDSVRDIVEASRQLGISYLTLFTFSTENWN 98
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP EIS L++L+ L+K +L NNI++ VIGN L + + VL E T N G
Sbjct: 99 RPEKEISALMRLLIKVLRKEARALHDNNIRLNVIGNTALLPEKVRTVLDETVVLTGHNNG 158
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L + IA +YS + +I A +++ ++++G V +D L L T+ +PDP+L+IRT
Sbjct: 159 LVMSIALSYSGKWDIVEACRSLAVEVKAGRVSPEMIDEHLFQSCLSTASIPDPELLIRTS 218
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE R+S+F+LWQ AYSE F YWPDF R F+ AL Y R+RRFG S++
Sbjct: 219 GEFRISNFMLWQSAYSEIYFTKTYWPDFRRAQFYAALRDYQNRERRFGQTSEQ 271
>gi|56964003|ref|YP_175734.1| undecaprenyl pyrophosphate synthetase [Bacillus clausii KSM-K16]
gi|73920254|sp|Q5WFT2|UPPS_BACSK RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|56910246|dbj|BAD64773.1| undecaprenyl pyrophosphate synthetase [Bacillus clausii KSM-K16]
Length = 257
Score = 298 bits (762), Expect = 6e-79, Method: Composition-based stats.
Identities = 103/236 (43%), Positives = 159/236 (67%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S+ + P H+ IIMDGNGRWA +GLPR AGHR+G++ N+IV AA + I+ LT++AF
Sbjct: 22 SIDPQNIPRHVAIIMDGNGRWAKEKGLPRIAGHREGMKTVNKIVRAANTLNIEILTLYAF 81
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP +E+ L+KL + +LK +L + N++VR++G++ L L + EA ++
Sbjct: 82 STENWKRPKAEVEFLLKLPERYLKSELPTLIEENVQVRLMGSKDGLPSYTLHAVDEAIEK 141
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NTGL L A NY SR E++ A++ I + ++ G + + I+ +L ++ + DPD
Sbjct: 142 TKHNTGLILNFALNYGSRFELTSAMQQIAKKVQQGELMPEHITEETISAHLMSNHLRDPD 201
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
L+IRT GE RLS+F+LWQ+AYSEF+F+ YWP+F+ F+ A+ Y R RR+GG+
Sbjct: 202 LLIRTSGELRLSNFMLWQIAYSEFLFMDVYWPNFTEHHFYKAVLTYQNRGRRYGGV 257
>gi|145220335|ref|YP_001131044.1| undecaprenyl pyrophosphate synthetase [Prosthecochloris
vibrioformis DSM 265]
gi|145206499|gb|ABP37542.1| Undecaprenyl pyrophosphate synthetase [Chlorobium phaeovibrioides
DSM 265]
Length = 281
Score = 298 bits (762), Expect = 6e-79, Method: Composition-based stats.
Identities = 102/243 (41%), Positives = 155/243 (63%), Gaps = 1/243 (0%)
Query: 1 MVASMMSS-SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ A + +S P HI IIMDGNGRWA +G R GH G+ +IV A+AE+GI++LT
Sbjct: 29 LQAELKASCELPSHIAIIMDGNGRWARLKGKTRVEGHAAGVNSVRDIVEASAELGIEHLT 88
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
+F FS NW+RP E++ L++LI L + +L+ NNI+++VIGNR L + L+
Sbjct: 89 LFTFSTENWKRPEKEVAALMQLIVRILGRETRALQDNNIRLQVIGNRELLPLKVRETLEN 148
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV 179
+ T+ N+ L L IA +YS + +I +A + + + +E+G + + +V+ LI +L T+ +
Sbjct: 149 TIELTKNNSSLTLTIALSYSGKWDIVQACRTVAEAVEAGRITADEVNEQLIESHLSTAGI 208
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDP+LIIRT GE R+S+F++WQ AYSE F YWPDF R + A+ + R+RRFG
Sbjct: 209 PDPELIIRTSGEFRISNFMIWQSAYSEIYFTNTYWPDFRRANLYEAIRDFQGRERRFGKT 268
Query: 240 SKK 242
S +
Sbjct: 269 SDQ 271
>gi|310641585|ref|YP_003946343.1| di-trans,poly-cis-decaprenylcistransferase [Paenibacillus polymyxa
SC2]
gi|309246535|gb|ADO56102.1| Di-trans,poly-cis-decaprenylcistransferase [Paenibacillus polymyxa
SC2]
Length = 255
Score = 298 bits (762), Expect = 6e-79, Method: Composition-based stats.
Identities = 105/237 (44%), Positives = 147/237 (62%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ + P H+ +IMDGNGRWA G+PR GH+ G++ AA E+GIK LT+FAF
Sbjct: 19 AISKDNIPQHVAVIMDGNGRWAKRIGMPRIVGHQNGMKAVKRTAIAADELGIKYLTLFAF 78
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP E+ L+KL + FL L + N++VR++GN+ L + L EA +
Sbjct: 79 STENWTRPKDEVDFLMKLPQEFLAIELDELIEKNVQVRMMGNKEHLPSHTVEALTEATRR 138
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NTGL L A NY SR EI+ ++ + + IE G + D+ S LI L ++ +PDPD
Sbjct: 139 TENNTGLVLNFALNYGSRLEITECMQALGRQIEDGKLKPEDITSELIGNTLLSTGMPDPD 198
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
L+IRT GE RLS+F+LWQ+AYSE F YWP+F +E + A+ +Y R RR+GGL
Sbjct: 199 LLIRTSGELRLSNFMLWQLAYSELWFTDIYWPEFKKEHLYEAVIEYQKRSRRYGGLK 255
>gi|54310080|ref|YP_131100.1| putative undecaprenyl diphosphate synthase [Photobacterium
profundum SS9]
gi|73920270|sp|Q6LN28|UPPS_PHOPR RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|46914519|emb|CAG21298.1| putative undecaprenyl diphosphate synthase [Photobacterium
profundum SS9]
Length = 254
Score = 298 bits (762), Expect = 6e-79, Method: Composition-based stats.
Identities = 96/239 (40%), Positives = 146/239 (61%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P H+ +IMDGNGRWA A+G R GH+ G+E + V A +G+K LT+FAF
Sbjct: 9 ELSAECLPKHVAVIMDGNGRWAKAKGKARVFGHKAGVEAVRKSVTTANRLGVKVLTLFAF 68
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRRP E+S L++L + L + L KNNI++R+IG++ + + + +E
Sbjct: 69 SSENWRRPEDEVSLLMELFMTVLTREVKRLHKNNIQLRIIGDKSGFSERLQRKIATSEAL 128
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NTGL L IA NY + +I +A K + I + + D+ +++ + T+D+PD D
Sbjct: 129 TANNTGLVLNIAANYGGQWDILQATKKLAVQIAEQGLTASDITEDMLSAGMSTADLPDVD 188
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRT GE R+S+F+LWQ AY+E F ++WPDF E F +A+ Y R+RRFG ++
Sbjct: 189 LMIRTSGECRISNFMLWQAAYAELYFTEQHWPDFDEESFANAIAWYINRERRFGCTGEQ 247
>gi|301059180|ref|ZP_07200120.1| di-trans,poly-cis-decaprenylcistransferase [delta proteobacterium
NaphS2]
gi|300446728|gb|EFK10553.1| di-trans,poly-cis-decaprenylcistransferase [delta proteobacterium
NaphS2]
Length = 241
Score = 298 bits (762), Expect = 6e-79, Method: Composition-based stats.
Identities = 99/235 (42%), Positives = 139/235 (59%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P H+ IIMDGNGRWA PR GHRKG E IV + ++GI+ LT++AFS
Sbjct: 4 LSKERLPKHVAIIMDGNGRWAEKHAFPRVRGHRKGAESVRTIVTTSRKLGIEYLTLYAFS 63
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E++ L+KL+ SFLK+ +K N I++ VIG L VL E QT
Sbjct: 64 EENWKRPPHEVNALMKLLGSFLKRELKEMKDNGIRLNVIGRTHKLPATTREVLLETIAQT 123
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ L +A +Y R EI A++++ Q ++SG + D+ + L T +PDPDL
Sbjct: 124 SHGGRMVLTLALSYGGRQEILDAVRSLAQKVKSGILDPEDITEDRFSGNLYTKGLPDPDL 183
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE R+S+FLLWQ++YSE WPDF F +A+++Y RDRRFG +
Sbjct: 184 LIRTSGEYRISNFLLWQISYSEIYITTTLWPDFGEPEFLNAISEYQKRDRRFGAV 238
>gi|199597106|ref|ZP_03210538.1| Undecaprenyl pyrophosphate synthase [Lactobacillus rhamnosus HN001]
gi|258508616|ref|YP_003171367.1| undecaprenyl pyrophosphate synthetase [Lactobacillus rhamnosus GG]
gi|199591910|gb|EDY99984.1| Undecaprenyl pyrophosphate synthase [Lactobacillus rhamnosus HN001]
gi|257148543|emb|CAR87516.1| Undecaprenyl pyrophosphate synthetase [Lactobacillus rhamnosus GG]
gi|259649923|dbj|BAI42085.1| undecaprenyl pyrophosphate synthase [Lactobacillus rhamnosus GG]
Length = 250
Score = 298 bits (762), Expect = 6e-79, Method: Composition-based stats.
Identities = 106/241 (43%), Positives = 143/241 (59%), Gaps = 3/241 (1%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P HI IIMDGNGRWA R LPR AGH++G++ I AA+ +G+K LT++AF
Sbjct: 10 KLDPARIPAHIAIIMDGNGRWAKRRLLPRVAGHKQGMQNVKTITKAASRLGVKVLTLYAF 69
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP SE++ L++L F L K N+KV V+G L + ++A
Sbjct: 70 STENWKRPGSEVNYLMRLPVDFFNDFMPDLIKENVKVEVMGELTDLPEPTRKASEKAMAD 129
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT---SDVP 180
T NTG+ L A NY RDE+ A + + + G + D+D + L T D+
Sbjct: 130 TANNTGMILNFALNYGGRDELVHAARKLASAVRDGQLDPEDIDDQHFSAALMTGFLGDLA 189
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GE R+S+FLLWQ+AYSE VF+ +YWPDFS A+ Y RDRRFGGL
Sbjct: 190 DPDLLIRTSGELRISNFLLWQIAYSELVFVDDYWPDFSPAALEAAIATYQARDRRFGGLK 249
Query: 241 K 241
K
Sbjct: 250 K 250
>gi|83589886|ref|YP_429895.1| undecaprenyl pyrophosphate synthetase [Moorella thermoacetica ATCC
39073]
gi|83572800|gb|ABC19352.1| Undecaprenyl pyrophosphate synthetase [Moorella thermoacetica ATCC
39073]
Length = 259
Score = 298 bits (762), Expect = 6e-79, Method: Composition-based stats.
Identities = 102/237 (43%), Positives = 140/237 (59%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P H+ IIMDGNGRWA +RGLPR AGHR G+E +IV A + GI LT++AF
Sbjct: 22 ELDRERLPRHVAIIMDGNGRWARSRGLPRLAGHRAGVESLRDIVRACVDWGIGILTVYAF 81
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP E+ L+ L+ +L++ L++ ++VR IG L L+ A +
Sbjct: 82 STENWKRPHEEVEGLMNLLVEYLRRELAELRREGVQVRAIGRLEGLPRQAREELERARKE 141
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T N L L +A NY R E+ A + I + G + ++D +I +L T+ +PDPD
Sbjct: 142 TAANKRLILNLALNYGGRSELVDACRRIATLVARGELDPGEIDEEVINNFLYTAGLPDPD 201
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
L+IR GE R+S+FLLWQ+AY+EF YWPDF RE AL Y R+RRFGGL
Sbjct: 202 LLIRPSGEMRVSNFLLWQLAYTEFWVTDIYWPDFRREDLRRALLDYQQRERRFGGLK 258
>gi|225570390|ref|ZP_03779415.1| hypothetical protein CLOHYLEM_06490 [Clostridium hylemonae DSM
15053]
gi|225160761|gb|EEG73380.1| hypothetical protein CLOHYLEM_06490 [Clostridium hylemonae DSM
15053]
Length = 245
Score = 298 bits (762), Expect = 6e-79, Method: Composition-based stats.
Identities = 112/234 (47%), Positives = 161/234 (68%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P H+ II+DGNGRWA ++G+PR GH +G + I A +GIK LT++AFS NW
Sbjct: 9 NVPQHVAIILDGNGRWAKSKGMPRNYGHAQGSKNVERICEEAYRMGIKYLTVYAFSTENW 68
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+ L+KL+++++K + KN++K+RVIG+ LDDDI + E + T+ N
Sbjct: 69 NRPQDEVDALMKLLRNYMKTCLKTAAKNDMKIRVIGDLSRLDDDIRGRIAELVEATKNNK 128
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GLN IA NY SRDE+ RA++ + +D SG + + D+D +L YLDT D+PDPDL+IRT
Sbjct: 129 GLNFQIAINYGSRDEMVRAVRRLAEDCASGRIKADDIDETLFEHYLDTHDIPDPDLLIRT 188
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+RLS++LLWQ+AY+EF F WPDF++E A+ QYN RDRR+GG+ ++
Sbjct: 189 SGEQRLSNYLLWQMAYTEFYFTEILWPDFTKEELVKAVAQYNARDRRYGGVKEE 242
>gi|319945656|ref|ZP_08019908.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus australis
ATCC 700641]
gi|319748255|gb|EFW00497.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus australis
ATCC 700641]
Length = 249
Score = 298 bits (762), Expect = 7e-79, Method: Composition-based stats.
Identities = 108/234 (46%), Positives = 142/234 (60%), Gaps = 4/234 (1%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HIGIIMDGNGRWA R PR GH+ G+E E+ AA E+G+K LT++AFS NW
Sbjct: 16 VPKHIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQEVTIAAKEMGVKALTVYAFSTENWT 75
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+S ++ L F + L +NN+K+++IG L + L L++AE T NTG
Sbjct: 76 RPQQEVSFIMNLPVEFYDRFVPELHRNNVKIQMIGEVSRLPKETLEALEKAEALTHSNTG 135
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLI 185
L L A NY R E+++A+K I Q++ + D+ IA YL TS +P DPDLI
Sbjct: 136 LILNFALNYGGRAELTQAVKQIAQEVLDAHLNPGDITEETIANYLYTSSLPKDLRDPDLI 195
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRT GE RLS+FL WQ AYSE F WPDF + A+ +Y+ R RRFGG+
Sbjct: 196 IRTSGELRLSNFLPWQAAYSELYFTDVMWPDFGEKALHDAIEEYSHRHRRFGGV 249
>gi|314933439|ref|ZP_07840804.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus caprae
C87]
gi|313653589|gb|EFS17346.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus caprae
C87]
Length = 256
Score = 297 bits (761), Expect = 7e-79, Method: Composition-based stats.
Identities = 103/238 (43%), Positives = 152/238 (63%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P+H+ IIMDGNGRWA R +PR GH +G++ +I A+ +GIK LT++AFS
Sbjct: 19 LDLHNIPEHVAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITREASNIGIKYLTLYAFS 78
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP SE++ ++ L +FLK L + N+KV IG L + + +A+++T
Sbjct: 79 TENWSRPESEVNYIMNLPVNFLKTFLPELIEKNVKVETIGFAEGLPQSTIEAIDQAKEKT 138
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NTGL L A NY R EI +++K IF++++S S +D +L+ K+L T D PDP+L
Sbjct: 139 KNNTGLTLIFAINYGGRAEIIQSMKEIFEELQSEHQSSEAIDENLLNKHLMTRDYPDPEL 198
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IRT GE+R+S+FL+WQ +YSEF+F + WPDF L Y R RRFGGLS++
Sbjct: 199 LIRTSGEQRISNFLIWQASYSEFIFNEKLWPDFDENELKECLKIYQSRQRRFGGLSEE 256
>gi|260172136|ref|ZP_05758548.1| undecaprenyl pyrophosphate synthetase [Bacteroides sp. D2]
gi|315920445|ref|ZP_07916685.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|313694320|gb|EFS31155.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 244
Score = 297 bits (761), Expect = 7e-79, Method: Composition-based stats.
Identities = 102/241 (42%), Positives = 149/241 (61%), Gaps = 2/241 (0%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + + P H+ IIMDGNGRWA RG R GHR G E I AA +GIK LT++
Sbjct: 4 IEQIDKTRIPQHVAIIMDGNGRWAKQRGEERTYGHRAGAETVQNITEDAARLGIKYLTLY 63
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
FS NW RP EI+ L+ L+ +++ +L KNNI+ VIG+ L ++ L
Sbjct: 64 TFSTENWNRPQDEIAALMNLLLESIEEE--TLMKNNIRFNVIGDFKKLPVEVQKSLASCI 121
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T N+G+ + +A +YSSR EI+ A++ I I++G + + IA +L+T +PD
Sbjct: 122 ERTSQNSGMCMVLALSYSSRWEITEAVRQIATLIKTGEISPEQITDECIASHLETKFMPD 181
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL+IRTGGE RLS++LLWQ AYSE F +WPDF++E + A+ +Y R+RRFG S+
Sbjct: 182 PDLLIRTGGEIRLSNYLLWQCAYSELYFCDTFWPDFNKEELYKAIWEYQQRERRFGKTSE 241
Query: 242 K 242
+
Sbjct: 242 Q 242
>gi|90413533|ref|ZP_01221524.1| putative undecaprenyl diphosphate synthase [Photobacterium
profundum 3TCK]
gi|90325465|gb|EAS41948.1| putative undecaprenyl diphosphate synthase [Photobacterium
profundum 3TCK]
Length = 254
Score = 297 bits (761), Expect = 7e-79, Method: Composition-based stats.
Identities = 96/239 (40%), Positives = 147/239 (61%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P H+ +IMDGNGRWA A+G R GH+ G+E + V+ A +G+K LT+FAF
Sbjct: 9 ELSAECLPKHVAVIMDGNGRWAKAKGKARVFGHKAGVEAVRKSVSTANRLGVKVLTLFAF 68
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRRP E+S L++L + L + L KNNI++R+IG++ + + + +E
Sbjct: 69 SSENWRRPEDEVSLLMELFMTVLTREVKRLHKNNIQLRIIGDKSGFSERLQRKIATSEAL 128
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NTGL L IA NY + +I +A K + I + + D+ +++ + T+D+PD D
Sbjct: 129 TANNTGLVLNIAANYGGQWDILQATKKLAVQIAEQGLTASDITEDMLSAGMSTADLPDVD 188
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRT GE R+S+F+LWQ AY+E F ++WPDF E F +A+ Y R+RRFG ++
Sbjct: 189 LMIRTSGECRISNFMLWQAAYAELYFTEQHWPDFDEESFANAIAWYINRERRFGCTGEQ 247
>gi|326802542|ref|YP_004320361.1| undecaprenyl pyrophosphate synthase [Sphingobacterium sp. 21]
gi|326553306|gb|ADZ81691.1| Undecaprenyl pyrophosphate synthase [Sphingobacterium sp. 21]
Length = 246
Score = 297 bits (761), Expect = 8e-79, Method: Composition-based stats.
Identities = 99/241 (41%), Positives = 153/241 (63%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
V + S P HI IIMDGNGRWA RG R GH++G++ +++ A E+G+ LT++
Sbjct: 4 VELIDRSKLPRHIAIIMDGNGRWAKERGKLRVFGHKRGVDSVRDVLEGAVEIGVPYLTLY 63
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
FS NW RP E++ L++L+ S + K L N +K+ IGN L L LK+
Sbjct: 64 TFSAENWNRPKLEVAALMELLVSSIGKETKRLMANGVKLNAIGNLDLLPAKALAHLKQCM 123
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T NT L +A +YSSR EI+ A K I Q ++ G + + D+D +L A++L++ +PD
Sbjct: 124 EETASNTKCTLTLALSYSSRWEIADAAKKIAQSVQQGLLKADDIDEALFAQHLNSYPLPD 183
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
P+L+IRT GE+R+S++LLWQ+AY+E F + WPDF R+ + A+ ++ R+RRFG S+
Sbjct: 184 PELMIRTSGEQRISNYLLWQLAYAELYFTSKLWPDFRRDDLYAAIVEFQNRERRFGLTSE 243
Query: 242 K 242
+
Sbjct: 244 Q 244
>gi|227534925|ref|ZP_03964974.1| Di-trans-poly-cis-decaprenylcistransferase (undecaprenyl
diphosphate synthetase) [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|227187681|gb|EEI67748.1| Di-trans-poly-cis-decaprenylcistransferase (undecaprenyl
diphosphate synthetase) [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
Length = 263
Score = 297 bits (761), Expect = 8e-79, Method: Composition-based stats.
Identities = 106/241 (43%), Positives = 143/241 (59%), Gaps = 3/241 (1%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P HI IIMDGNGRWA R PR AGH++G+ I AA+ +G+K LT++AF
Sbjct: 23 KLDPARIPAHIAIIMDGNGRWAKRRFFPRVAGHKQGMHNVKTITKAASRLGVKVLTLYAF 82
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP SE++ L++L F L K N+KV V+G L ++A
Sbjct: 83 STENWKRPGSEVNYLMRLPVDFFNDFMPDLIKENVKVEVMGELDDLPPQTRQASEKAMAD 142
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT---SDVP 180
T NTG+ L A NY RDE+ A + + + ++ G + D+D A L T D+
Sbjct: 143 TANNTGMILNFALNYGGRDELVHAAQKLAKQVQEGELSPDDIDDRHFANALMTGFLGDLA 202
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GE R+S+FLLWQ+AYSE VF+ +YWPDFS A+ +Y RDRRFGGL
Sbjct: 203 DPDLLIRTSGELRISNFLLWQIAYSELVFVDDYWPDFSPAALEAAIAEYQARDRRFGGLK 262
Query: 241 K 241
K
Sbjct: 263 K 263
>gi|242373551|ref|ZP_04819125.1| Di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis M23864:W1]
gi|242348914|gb|EES40516.1| Di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis M23864:W1]
Length = 264
Score = 297 bits (761), Expect = 9e-79, Method: Composition-based stats.
Identities = 99/238 (41%), Positives = 151/238 (63%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P+H+ IIMDGNGRWA R +PR GH +G++ +I A+ +GIK LT++AFS
Sbjct: 27 LDLHNIPEHVAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITREASNIGIKYLTLYAFS 86
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP SE++ ++ L +FLK L + N+KV IG L + + A+D+T
Sbjct: 87 TENWSRPESEVNYIMNLPVNFLKTFLPELIEKNVKVETIGFNNGLPKSTIEAIDYAKDKT 146
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NTGL L A NY R EI +++K I++++++ + ++ +D L K+L T + PDP+L
Sbjct: 147 KHNTGLTLVFAINYGGRAEIIQSMKEIYEELQTNNQSANAIDEELFNKHLMTHNYPDPEL 206
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IRT GE+R+S+FL+WQ +YSEF+F + WPDF + Y R RRFGGLS++
Sbjct: 207 LIRTSGEQRISNFLIWQASYSEFIFNEKLWPDFDENELKECIKIYQSRQRRFGGLSEE 264
>gi|21673106|ref|NP_661171.1| undecaprenyl diphosphate synthase [Chlorobium tepidum TLS]
gi|42559830|sp|Q8KFQ5|UPPS_CHLTE RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|21646179|gb|AAM71513.1| undecaprenyl diphosphate synthase [Chlorobium tepidum TLS]
Length = 265
Score = 297 bits (761), Expect = 9e-79, Method: Composition-based stats.
Identities = 105/233 (45%), Positives = 155/233 (66%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HIGIIMDGNGRWA +G R AGH G+E ++V A++++GI+NLT+F FSI NW+
Sbjct: 26 LPRHIGIIMDGNGRWAKIKGKSRIAGHVAGVESVRDVVEASSQLGIENLTLFTFSIENWK 85
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP EIS L+KL+ L+K L +N+I++ VIG+ + DD+ L E + TR N G
Sbjct: 86 RPKPEISALMKLLIKVLRKEAVKLLENDIRLEVIGDMEMIPDDVRKTLDETIELTRKNRG 145
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ + IA +YS + +I++A ++I ++ G + +D +L A YL T+ +PDPDL+IRT
Sbjct: 146 MAMTIALSYSGKWDITQACRHIALQVKQGLLDPETIDENLFASYLSTASMPDPDLLIRTS 205
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE R+S+F+LWQ AYSE +F WPDF R + A+ ++ R+RRFG S++
Sbjct: 206 GEYRISNFMLWQNAYSEIIFSNTLWPDFRRNELYEAIREFQKRERRFGKTSEQ 258
>gi|118590007|ref|ZP_01547411.1| undecaprenyl diphosphate synthase [Stappia aggregata IAM 12614]
gi|118437504|gb|EAV44141.1| undecaprenyl diphosphate synthase [Stappia aggregata IAM 12614]
Length = 255
Score = 297 bits (761), Expect = 9e-79, Method: Composition-based stats.
Identities = 116/236 (49%), Positives = 158/236 (66%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+ P H+ IMDGNGRWA ARGLPR GHR+G+ +++ A VGI+ +TI++FS N
Sbjct: 19 AKMPRHVAFIMDGNGRWATARGLPRTEGHRQGLAALRKVIRHAGRVGIETITIYSFSSEN 78
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP +E+S L+ L++ F+++ L + N+++R+IG R L+ IL +L EAED TR N
Sbjct: 79 WNRPQAEVSFLMGLLRRFVQRDLSELHEANVRIRIIGGRSDLEPGILALLNEAEDLTRHN 138
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
TGLNL +AFNY +R EI RA + + + +++G + D+ I LDTS +PDPDLIIR
Sbjct: 139 TGLNLVVAFNYGARSEIVRAAQELAEKVQAGKMQPADITEDAITAALDTSGLPDPDLIIR 198
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
T GE RLS+FLLWQ AYSEF F YWPDF F AL+ + R+RR+GGL K
Sbjct: 199 TSGEMRLSNFLLWQAAYSEFYFCDLYWPDFDEAAFDKALSCFCSRERRYGGLDAKA 254
>gi|125973516|ref|YP_001037426.1| undecaprenyl pyrophosphate synthetase [Clostridium thermocellum
ATCC 27405]
gi|256003334|ref|ZP_05428325.1| undecaprenyl diphosphate synthase [Clostridium thermocellum DSM
2360]
gi|125713741|gb|ABN52233.1| Undecaprenyl pyrophosphate synthetase [Clostridium thermocellum
ATCC 27405]
gi|255992624|gb|EEU02715.1| undecaprenyl diphosphate synthase [Clostridium thermocellum DSM
2360]
gi|316940244|gb|ADU74278.1| undecaprenyl diphosphate synthase [Clostridium thermocellum DSM
1313]
Length = 252
Score = 297 bits (761), Expect = 9e-79, Method: Composition-based stats.
Identities = 103/237 (43%), Positives = 144/237 (60%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
++ S P HI IIMDGNGRWA R LPR GHR+G ++ EI E+GIK LT++A
Sbjct: 16 GNIDYSKLPTHIAIIMDGNGRWAKKRALPRSMGHREGAKILKEITTFCGEIGIKYLTVYA 75
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW+RP SE+ L+ L+ +LK + +++++VIG+ DD+I +
Sbjct: 76 FSTENWKRPKSEVDALMSLLLDYLKNAETHIGGKDVRIQVIGDTSVFDDEIKKEIDRVTK 135
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T N GL L IA NY SR EI A K + +++ G + D++ ++ L T+ +PDP
Sbjct: 136 LTSKNNGLILNIALNYGSRAEIVHAAKRMAKEVLEGKLKPDDINEEVLNDRLYTAKIPDP 195
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DL+IR GGEKRLS+FLLWQ AY+E + WPDF +E A+ Y R+RRFGG+
Sbjct: 196 DLLIRPGGEKRLSNFLLWQSAYTELWYTDVLWPDFKKEHIVEAILDYQRRNRRFGGI 252
>gi|56751258|ref|YP_171959.1| undecaprenyl pyrophosphate synthase [Synechococcus elongatus PCC
6301]
gi|81299075|ref|YP_399283.1| undecaprenyl pyrophosphate synthase [Synechococcus elongatus PCC
7942]
gi|56686217|dbj|BAD79439.1| undecaprenyl pyrophosphate synthetase [Synechococcus elongatus PCC
6301]
gi|81167956|gb|ABB56296.1| Undecaprenyl pyrophosphate synthetase [Synechococcus elongatus PCC
7942]
Length = 251
Score = 297 bits (761), Expect = 9e-79, Method: Composition-based stats.
Identities = 93/236 (39%), Positives = 138/236 (58%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
++ P H+ +IMDGNGRWA RGLPR GHR+G++ +++ + GI LT +AFS
Sbjct: 16 LLPDRLPSHVAVIMDGNGRWAKQRGLPRIMGHRRGVDSLKQLLRCCDDWGIGALTAYAFS 75
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP E+ L+ L + L++ L N+++R +G+ +L + + A T
Sbjct: 76 TENWGRPHEEVDFLMTLFERVLRRELQELMAENVRIRFVGDLENLPTSLQREIDRATSAT 135
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N G+ +A NY R E+ +A + I ++ G + +D SL++ +L T+ V DPDL
Sbjct: 136 AQNDGIRFTVATNYGGRQELLKACREIAAQVQQGQLAIDAIDESLLSSHLYTAGVTDPDL 195
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
+IRT GEKRLS+FLLWQ+AY+E WPDF R F+ AL + R RRFG L+
Sbjct: 196 LIRTSGEKRLSNFLLWQLAYAEIYVTDTLWPDFDRYEFYLALRDFQSRQRRFGRLT 251
>gi|6136145|sp|O82827|UPPS_MICLU RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|3358087|dbj|BAA31993.1| undecaprenyl diphosphate synthase [Micrococcus luteus]
Length = 249
Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats.
Identities = 103/236 (43%), Positives = 151/236 (63%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ ++ P HI IIMDGNGRWA + +PR GH +G++ +I A+++G+K LT++AF
Sbjct: 14 NINAAQIPKHIAIIMDGNGRWAKQKKMPRIKGHYEGMQTVKKITRYASDLGVKYLTLYAF 73
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP E++ L+KL FL L + N+KV IG L D + EA+++
Sbjct: 74 STENWSRPKDEVNYLMKLPGDFLNTFLPELIEKNVKVETIGFIDDLPDHTKKAVLEAKEK 133
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NTGL L A NY R EI A++ I + +SG + ++ + +YL T+++PDP+
Sbjct: 134 TKHNTGLTLVFALNYGGRKEIISAVQLIAERYKSGEISLDEISETHFNEYLFTANMPDPE 193
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
L+IRT GE+RLS+FL+WQ +YSEFVFI E+WPDF+ E ++ Y R RRFGGL
Sbjct: 194 LLIRTSGEERLSNFLIWQCSYSEFVFIDEFWPDFNEESLAQCISIYQNRHRRFGGL 249
>gi|186686028|ref|YP_001869224.1| undecaprenyl pyrophosphate synthase [Nostoc punctiforme PCC 73102]
gi|186468480|gb|ACC84281.1| undecaprenyl diphosphate synthase [Nostoc punctiforme PCC 73102]
Length = 249
Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats.
Identities = 85/239 (35%), Positives = 140/239 (58%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P H+ +IMDGNGRWA +GLPR GH++G++ +++ + GI+ LT
Sbjct: 11 LPTDLKRELLPQHVAVIMDGNGRWAKRQGLPRIMGHKRGVDALKDLLRCCQDWGIQALTA 70
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E+ L+ L + L++ + + N++++ +GN +L + + +
Sbjct: 71 YAFSTENWKRPQEEVDFLMTLFQRVLRQELREMVEENVQIKFVGNLQALPRSLQQEISRS 130
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
++T+ N G+ +A NY R EI +A + I + ++ G + +++ + +L T+ +
Sbjct: 131 MEETKDNRGIRFSVATNYGGRQEILQACQAIAKQVQQGLLQPDEINEQVFESHLYTAGIT 190
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRT GE RLS+FLLWQ+AY E WPDF R F AL Y R+RRFG +
Sbjct: 191 DPDLLIRTSGEMRLSNFLLWQMAYGEIYITDALWPDFDRAEFHRALCAYQQRERRFGKV 249
>gi|59712565|ref|YP_205341.1| undecaprenyl pyrophosphate synthase [Vibrio fischeri ES114]
gi|73920285|sp|Q5E3E3|UPPS_VIBF1 RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|59480666|gb|AAW86453.1| undecaprenyl pyrophosphate synthase [Vibrio fischeri ES114]
Length = 257
Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats.
Identities = 100/233 (42%), Positives = 152/233 (65%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI +IMDGNGRWA A+G PR GH+ G++ + ++AA+++GI +T+FAFS NWR
Sbjct: 15 LPKHIAVIMDGNGRWAKAQGKPRVFGHKAGVDAVRKTISAASKLGINAITLFAFSSENWR 74
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+S L++L + L + L KNNI++R+IG + + EAE T NTG
Sbjct: 75 RPEEEVSVLMELFITVLSREVKRLHKNNIQLRIIGETSQFSSRLQKKIVEAETLTSENTG 134
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L +A NY + +I++A++ + +E G++ + D+D LIA L SD+P+ DL+IRT
Sbjct: 135 LVLNVAANYGGKWDITQAVRRLAYQVERGNLQADDIDEDLIASKLTMSDLPEVDLMIRTS 194
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE R+S+F+LWQ+AY+EF F +YWPDF+ + A+ + R+RRFG ++
Sbjct: 195 GECRISNFMLWQMAYAEFYFTDQYWPDFNEQSLADAVAWFVSRERRFGCTGEQ 247
>gi|13786808|pdb|1F75|A Chain A, Crystal Structure Of Undecaprenyl Diphosphate Synthase
From Micrococcus Luteus B-P 26
gi|13786809|pdb|1F75|B Chain B, Crystal Structure Of Undecaprenyl Diphosphate Synthase
From Micrococcus Luteus B-P 26
Length = 249
Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats.
Identities = 103/236 (43%), Positives = 151/236 (63%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ ++ P HI IIMDGNGRWA + +PR GH +G++ +I A+++G+K LT++AF
Sbjct: 14 NINAAQIPKHIAIIMDGNGRWAKQKKMPRIKGHYEGMQTVRKITRYASDLGVKYLTLYAF 73
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP E++ L+KL FL L + N+KV IG L D + EA+++
Sbjct: 74 STENWSRPKDEVNYLMKLPGDFLNTFLPELIEKNVKVETIGFIDDLPDHTKKAVLEAKEK 133
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NTGL L A NY R EI A++ I + +SG + ++ + +YL T+++PDP+
Sbjct: 134 TKHNTGLTLVFALNYGGRKEIISAVQLIAERYKSGEISLDEISETHFNEYLFTANMPDPE 193
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
L+IRT GE+RLS+FL+WQ +YSEFVFI E+WPDF+ E ++ Y R RRFGGL
Sbjct: 194 LLIRTSGEERLSNFLIWQCSYSEFVFIDEFWPDFNEESLAQCISIYQNRHRRFGGL 249
>gi|189499410|ref|YP_001958880.1| undecaprenyl diphosphate synthase [Chlorobium phaeobacteroides BS1]
gi|189494851|gb|ACE03399.1| undecaprenyl diphosphate synthase [Chlorobium phaeobacteroides BS1]
Length = 276
Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats.
Identities = 100/233 (42%), Positives = 146/233 (62%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P+H+ IIMDGNGRWA +G R GH G+E ++V A A++GI LT+F FS NW+
Sbjct: 33 LPEHVAIIMDGNGRWARQKGKTRIEGHAAGVEAVRDVVEACAQLGIGYLTLFTFSTENWK 92
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP EIS L++L+ L+K +L +N +++ VIGN L + LK+ + T+ NTG
Sbjct: 93 RPEKEISSLMQLLVKVLQKEARALFRNKVRIHVIGNIEQLPQKVKQTLKDTVELTKDNTG 152
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L IA +YS + +I +A + I ++I G + +D L+ +L T +P+P+L+IRT
Sbjct: 153 LTLCIALSYSGKWDILQACRAISREIAEGRISPDKIDEQLMDSFLSTRGIPEPELLIRTS 212
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE R+S+FLLWQ AYSE F YWPDF R + A+ + R+RRFG S++
Sbjct: 213 GEFRISNFLLWQSAYSEIYFTNTYWPDFRRGQLYDAIRDFQKRERRFGQTSEQ 265
>gi|332827506|gb|EGK00252.1| di-trans,poly-cis-decaprenylcistransferase [Dysgonomonas gadei ATCC
BAA-286]
Length = 249
Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats.
Identities = 95/241 (39%), Positives = 148/241 (61%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + + P HI +IMDGNGRWA + L R GH++GI + A+ ++ LT++
Sbjct: 4 LDQIDKTRVPKHIAVIMDGNGRWAKRQDLDRTFGHKEGISAVRRAIEGASRAEVRYLTLY 63
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
FS NW+RP E+ L+ L+ + L KNN++V+VIG+ L +D L
Sbjct: 64 TFSTENWKRPEEEVKALMSLMVQAVANETPELVKNNVRVKVIGDIDRLPEDTKKALDYCL 123
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ T + TG + +A +YSS+ E++RA+KNI D++SG + + L++ YL+T +PD
Sbjct: 124 ETTSVCTGTTVILALSYSSKWELTRAMKNIVIDVKSGKIEPDAITEDLVSSYLETKGIPD 183
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PD+++RTGGE R+S+FLLWQ+AYSE F E WPDF+ E + A+ + R+RRFG S+
Sbjct: 184 PDILVRTGGELRISNFLLWQIAYSELFFSDELWPDFNEESLYKAIVDFQNRERRFGKTSE 243
Query: 242 K 242
+
Sbjct: 244 Q 244
>gi|223044250|ref|ZP_03614287.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus capitis
SK14]
gi|222442400|gb|EEE48508.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus capitis
SK14]
Length = 256
Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats.
Identities = 103/238 (43%), Positives = 152/238 (63%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P+H+ IIMDGNGRWA R +PR GH +G++ +I A+ +GIK LT++AFS
Sbjct: 19 LDLHNIPEHVAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITREASNIGIKYLTLYAFS 78
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP SE++ ++ L +FLK L + N+KV IG L + + +A+++T
Sbjct: 79 TENWSRPESEVNYIMNLPVNFLKTFLPELIEKNVKVETIGFGEGLPQSTIEAINQAKEKT 138
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NTGL L A NY R EI +++K IF++++S S +D +L+ K+L T D PDP+L
Sbjct: 139 KNNTGLTLIFAINYGGRAEIIQSMKEIFEELQSAHQSSEAIDENLLNKHLMTRDYPDPEL 198
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IRT GE+R+S+FL+WQ +YSEF+F + WPDF L Y R RRFGGLS++
Sbjct: 199 LIRTSGEQRISNFLIWQASYSEFIFNEKLWPDFDENELKECLKIYQSRQRRFGGLSEE 256
>gi|197336106|ref|YP_002156786.1| undecaprenyl pyrophosphate synthetase 1 [Vibrio fischeri MJ11]
gi|197317596|gb|ACH67043.1| undecaprenyl pyrophosphate synthetase 1 [Vibrio fischeri MJ11]
Length = 257
Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats.
Identities = 101/233 (43%), Positives = 153/233 (65%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI +IMDGNGRWA A+G PR GH+ G++ + ++AA+++GI +T+FAFS NWR
Sbjct: 15 LPKHIAVIMDGNGRWAKAQGKPRVFGHKAGVDAVRKTISAASKLGINAITLFAFSSENWR 74
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+S L++L + L + L KNNI++R+IG + + EAE T NTG
Sbjct: 75 RPEEEVSVLMELFITVLSREVKRLHKNNIQLRIIGETSQFSSRLQKKIVEAETLTSENTG 134
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L +A NY + +I++A++ + +E G++ + D+D SLIA L SD+P+ DL+IRT
Sbjct: 135 LVLNVAANYGGKWDITQAVRRLAYQVERGNLQADDIDESLIASKLTMSDLPEVDLMIRTS 194
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE R+S+F+LWQ+AY+EF F +YWPDF+ + A+ + R+RRFG ++
Sbjct: 195 GECRISNFMLWQMAYAEFYFTDQYWPDFNEQSLADAVAWFVSRERRFGCTGEQ 247
>gi|89092093|ref|ZP_01165048.1| undecaprenyl diphosphate synthase [Oceanospirillum sp. MED92]
gi|89083828|gb|EAR63045.1| undecaprenyl diphosphate synthase [Oceanospirillum sp. MED92]
Length = 253
Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats.
Identities = 97/234 (41%), Positives = 147/234 (62%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HI IIMDGN RWA R LP AGH+ G++ ++ E+G++ LT+FAFS NW
Sbjct: 13 KIPRHIAIIMDGNNRWAKERRLPGLAGHKAGVDCVRSVIEGCMEMGVEALTLFAFSSENW 72
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP E+ L++L K L + L KNNI++RV+G++ + + +++ E T+
Sbjct: 73 KRPPLEVKGLMELFKLALDREAKKLVKNNIRLRVVGDKTAFSSSLQAKIEKVEGMTQDCD 132
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL+L IA NY R +I A + + + +SGS+ D++ +L A+ + +D+P+PDL IRT
Sbjct: 133 GLHLNIAANYGGRWDIVSAAQRLAELCQSGSIQPADINETLFAQNISLADIPEPDLCIRT 192
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GGE+R+S+FL+WQ AY+E F YWPDF +E A+ Y+ R RRFG S++
Sbjct: 193 GGEQRISNFLIWQFAYTELFFSDAYWPDFDKEHLKKAVVDYSGRQRRFGKTSEQ 246
>gi|303236414|ref|ZP_07323003.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella disiens
FB035-09AN]
gi|302483386|gb|EFL46392.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella disiens
FB035-09AN]
Length = 257
Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats.
Identities = 101/242 (41%), Positives = 146/242 (60%), Gaps = 2/242 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + + P+HI IIMDGNGRWA R PR GH+ G+E +I A +G+KNLT+
Sbjct: 10 MAEELDITRIPEHIAIIMDGNGRWAMERNKPRSFGHQAGVETVRKITAECTRLGVKNLTL 69
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW RP E++ L+ L+ + L+ KNN++ +VIG+ L ++ L+E
Sbjct: 70 YTFSTENWNRPTDEVAALMGLVFTSLEDEI--FMKNNVRFQVIGDIKRLPVEVQQRLQET 127
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
D T N + + IA +YS+R EI+ A K I Q + G + ++ I+KYL T+ +
Sbjct: 128 MDHTAKNNAMTMTIALSYSARWEITEATKQIAQKVGKGEIKLEEITEDTISKYLCTNFMA 187
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRTGGE R+S++LLWQ+AYSE F YWPDF ++ + A+ Y R RRFG
Sbjct: 188 DPDLLIRTGGEYRISNYLLWQLAYSELYFCDTYWPDFDKKDLYKAIVDYQGRQRRFGKTE 247
Query: 241 KK 242
K+
Sbjct: 248 KQ 249
>gi|70726655|ref|YP_253569.1| undecaprenyl pyrophosphate synthase [Staphylococcus haemolyticus
JCSC1435]
gi|82582320|sp|Q4L5W2|UPPS_STAHJ RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|68447379|dbj|BAE04963.1| undecaprenyl pyrophosphatase synthetase [Staphylococcus
haemolyticus JCSC1435]
Length = 256
Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats.
Identities = 100/238 (42%), Positives = 155/238 (65%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P+H+ IIMDGNGRWA R +PR GH +G++ + A+++GIK LT++AFS
Sbjct: 19 LDLHNLPEHVAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKTVTREASDLGIKYLTLYAFS 78
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP +E++ ++ L +FLK L + N+++ IG ++ + ++ A+++T
Sbjct: 79 TENWSRPENEVNYIMNLPVNFLKTFLPELIEKNVQIETIGFLDAVPKSTIEAIEHAKEKT 138
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NTGL L A NY R EI +++K+I+ +++ S D+D S+I K+L T PDP+L
Sbjct: 139 KNNTGLKLIFAINYGGRAEIVQSMKSIYDELQRNGQDSKDIDESMINKHLMTHSYPDPEL 198
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IRT GE+R+S+FL+WQ +YSEF+F + WPDF E F + L Y R RRFGGLSK+
Sbjct: 199 LIRTSGEQRISNFLIWQSSYSEFIFNEKLWPDFDGEEFKNCLKIYQSRQRRFGGLSKE 256
>gi|254361114|ref|ZP_04977259.1| di-trans,poly-cis-decaprenylcistransferase [Mannheimia haemolytica
PHL213]
gi|153092600|gb|EDN73655.1| di-trans,poly-cis-decaprenylcistransferase [Mannheimia haemolytica
PHL213]
Length = 230
Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats.
Identities = 94/229 (41%), Positives = 140/229 (61%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IIMDGNGRWA +G R GH+ G++ V+ AA+ I+ LT++AFS NW
Sbjct: 1 MPKHVAIIMDGNGRWAKQKGKLRIFGHQNGVKAVRSAVSFAAKHHIQVLTLYAFSSENWS 60
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP +E+S L+ L L L KNNI++++IG++ + +++ + E+E T NTG
Sbjct: 61 RPETEVSALMSLFMKALDSEVKQLHKNNIRLKIIGDKSAFSENLQKRIAESEKLTENNTG 120
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L IA NY +I +A + + ++S + + +L ++L T + P DL+IRT
Sbjct: 121 LILNIAANYGGYWDIVQAAQQLAVHVKSEQLAVEQITPALFQQHLVTENQPQVDLLIRTS 180
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GE+R+S+FLLWQ+AY+E F P WPDF+ E F A+ Y R+RRFGG
Sbjct: 181 GEQRISNFLLWQIAYAELFFSPVLWPDFNDEAFSDAIYAYQQRERRFGG 229
>gi|330685684|gb|EGG97325.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU121]
Length = 256
Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats.
Identities = 100/239 (41%), Positives = 154/239 (64%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ + P+H+ IIMDGNGRWA R +PR GH +G++ ++ A+++GIK LT++AF
Sbjct: 18 NLDLHNIPEHVAIIMDGNGRWAKQRKMPRIKGHYEGMQTIKKVTREASDIGIKYLTLYAF 77
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP SE++ ++ L +FLK L + N+KV IG + L + + A+++
Sbjct: 78 STENWSRPESEVNYIMNLPVNFLKTFLPELIEKNVKVETIGFQKGLPTSTIEAIDHAKEK 137
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NTGL L A NY R EI ++ K I +++ + S D++ LI ++L T + PDP+
Sbjct: 138 TKNNTGLRLIFAINYGGRAEIVQSFKTIVDELQHKGLSSDDINEDLINQHLMTKNYPDPE 197
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRT GE+R+S+FL+WQV+YSEF+F + WPDF + + L Y R RRFGGLS++
Sbjct: 198 LLIRTSGEQRISNFLIWQVSYSEFIFNEKLWPDFDGDELKNCLKIYQSRQRRFGGLSEE 256
>gi|227821901|ref|YP_002825871.1| undecaprenyl pyrophosphate synthase [Sinorhizobium fredii NGR234]
gi|227340900|gb|ACP25118.1| undecaprenyl pyrophosphate synthetase [Sinorhizobium fredii NGR234]
Length = 247
Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats.
Identities = 124/240 (51%), Positives = 176/240 (73%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ +S++ P H+ IIMDGNGRWA ARGLPR GHRKG+E V AAE+GI+ LT+F
Sbjct: 1 MQEFVSTNVPAHVAIIMDGNGRWANARGLPRTMGHRKGVEAVRGAVKTAAELGIRYLTLF 60
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+S+L+ L+K+F+++ L + N+++RVIG+R +L DIL +L EAE
Sbjct: 61 AFSSENWSRPEDEVSDLMGLLKAFIRRDLADLHRENVRIRVIGDRANLSGDILPLLIEAE 120
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ T NTG+ L IAFNY +RDE++RA++ + +++ +G + D+ + IA LDT+ +PD
Sbjct: 121 ETTSANTGITLVIAFNYGARDELARAMRRLAEEVATGRLRPDDITADRIAASLDTAGIPD 180
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDLI+RT GE+RLS+FLLWQ AYSE +F+PE WPDF+R+ F A+ +Y R+RRFGGL +
Sbjct: 181 PDLILRTSGEERLSNFLLWQGAYSELLFVPELWPDFTRDTFIAAIEKYAARERRFGGLPQ 240
>gi|119512924|ref|ZP_01631987.1| undecaprenyl pyrophosphate synthetase [Nodularia spumigena CCY9414]
gi|119462420|gb|EAW43394.1| undecaprenyl pyrophosphate synthetase [Nodularia spumigena CCY9414]
Length = 249
Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats.
Identities = 87/239 (36%), Positives = 139/239 (58%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + P H+ +IMDGNGRWA +GLPR GH++G++ +++ + GI+ LT
Sbjct: 11 LPSDLKRELLPKHVAVIMDGNGRWAKRQGLPRIMGHKRGVDALKDLLRCCKDWGIQALTA 70
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E+ L+ L + L++ + + N++++ +GN +L + + +
Sbjct: 71 YAFSTENWKRPQEEVDFLMTLFQRVLRQELREMVEENVQIQFVGNLDALPRSLQAEISRS 130
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+T N + +A NY R EI +A + I Q ++ G + ++D L ++L T+ +
Sbjct: 131 MAETSHNRAIRFTVATNYGGRQEILQACRAIAQKVQQGVIQPDEIDEQLFERHLYTAGIT 190
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRT GE RLS+FLLWQ+AY E WPDF R F AL Y R+RRFG +
Sbjct: 191 DPDLLIRTSGEMRLSNFLLWQMAYGEIYITDALWPDFDRNEFHRALCAYQQRERRFGKV 249
>gi|229552425|ref|ZP_04441150.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus rhamnosus
LMS2-1]
gi|258539795|ref|YP_003174294.1| undecaprenyl pyrophosphate synthetase [Lactobacillus rhamnosus Lc
705]
gi|229314162|gb|EEN80135.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus rhamnosus
LMS2-1]
gi|257151471|emb|CAR90443.1| Undecaprenyl pyrophosphate synthetase [Lactobacillus rhamnosus Lc
705]
Length = 250
Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats.
Identities = 106/241 (43%), Positives = 143/241 (59%), Gaps = 3/241 (1%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P HI IIMDGNGRWA R LPR AGH++G++ I AA+ +G+K LT++AF
Sbjct: 10 KLDPARIPAHIAIIMDGNGRWAKRRLLPRVAGHKQGMQNVKTITKAASRLGVKVLTLYAF 69
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP SE++ L++L F L K N+KV V+G L + ++A
Sbjct: 70 STENWKRPGSEVNYLMRLPVDFFNDFMPDLIKENVKVEVMGELTDLPEPTRKASEKAMAD 129
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT---SDVP 180
T NTG+ L A NY RDE+ A + + + G + D+D + L T D+
Sbjct: 130 TANNTGMILNFALNYGGRDELVHAARKLASAVRDGQLDPEDIDDQRFSDALMTGFLGDLA 189
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GE R+S+FLLWQ+AYSE VF+ +YWPDFS A+ Y RDRRFGGL
Sbjct: 190 DPDLLIRTSGELRISNFLLWQIAYSELVFVDDYWPDFSPAALEAAIATYQARDRRFGGLK 249
Query: 241 K 241
K
Sbjct: 250 K 250
>gi|197303246|ref|ZP_03168287.1| hypothetical protein RUMLAC_01969 [Ruminococcus lactaris ATCC
29176]
gi|197297672|gb|EDY32231.1| hypothetical protein RUMLAC_01969 [Ruminococcus lactaris ATCC
29176]
Length = 236
Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats.
Identities = 110/234 (47%), Positives = 156/234 (66%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P HI II+DGNGRWA ++G+PR GH +G + I A +GIK LT++AFS NW
Sbjct: 2 NVPQHIAIILDGNGRWAKSKGMPRNYGHAQGSKNVERICEEAWRLGIKYLTVYAFSTENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP +E+ L+ L+++++K + KN++K+RVIG+ LD++I +KE E+ T N
Sbjct: 62 SRPKNEVDALMTLLRNYMKTCLKTAAKNDMKIRVIGDIEPLDENIKSRIKELEEATVNNG 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GLN IA NY SRDEI+RA+K I +D G + + + YLDT D+PDPDL+IRT
Sbjct: 122 GLNFTIALNYGSRDEITRAVKKIAEDCREGKINPDSITEKTVNDYLDTHDIPDPDLMIRT 181
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+RLS++LLWQ+AYSEF F WP F++E A+ +YN R RRFGG+ ++
Sbjct: 182 SGEQRLSNYLLWQLAYSEFYFTDVPWPAFTKEELIKAIEEYNHRHRRFGGVEEE 235
>gi|325262933|ref|ZP_08129669.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium sp. D5]
gi|324032027|gb|EGB93306.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium sp. D5]
Length = 238
Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats.
Identities = 111/234 (47%), Positives = 162/234 (69%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P H+ II+DGNGRWA ++G+PR GH +G + I A +GIK LT++AFS NW
Sbjct: 2 NVPQHVAIILDGNGRWAKSKGMPRNYGHAQGSKNVERICEEAWRMGIKYLTVYAFSTENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP SE+ L+KL+++++K + +KN++K+RVIG+ +LD+DI ++E E+ ++ N
Sbjct: 62 NRPKSEVDALMKLLRNYMKTCLKTAEKNDMKIRVIGDIKALDEDIKNRIRELEEASKDNN 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GLN IA NY SRDE+ RA+K++ QD V ++ SL YLDT +PDPDL+IRT
Sbjct: 122 GLNFTIAINYGSRDEMIRAVKSLTQDCVDQKVSVEEISESLYESYLDTHGIPDPDLLIRT 181
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+RLS++LLWQ+AY+EF F WPDF++E A+ QYN RDRR+GG+ ++
Sbjct: 182 SGEQRLSNYLLWQLAYTEFYFTDILWPDFTKEELVKAVEQYNSRDRRYGGVKEE 235
>gi|149928180|ref|ZP_01916425.1| undecaprenyl pyrophosphate synthetase [Limnobacter sp. MED105]
gi|149823071|gb|EDM82311.1| undecaprenyl pyrophosphate synthetase [Limnobacter sp. MED105]
Length = 262
Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats.
Identities = 96/236 (40%), Positives = 156/236 (66%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+S+ P H+ I+MDGNGRWA +R +PR AGH++G++ V A E+G+++LT+FAFS
Sbjct: 14 TSNIPKHVAIVMDGNGRWAKSRLMPRFAGHKRGVDAVKRTVQACCELGVEHLTLFAFSSE 73
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+S L++L L+K ++ + NI +R+IG+ + + ++ + AE+ T+
Sbjct: 74 NWRRPEEEVSLLMRLFIRVLRKDVEAMHRENICLRIIGDTTAFEPELQAAISSAEELTKN 133
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NT L L IA NY R +I +A K++ + + + + + ++++L P+PDL I
Sbjct: 134 NTRLFLNIAANYGGRWDILQATKSMLKCNPELANNPNQISETDLSRHLCLQGSPEPDLFI 193
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE+R+S+FLLWQ+AY+EF F ++WPDF + + A++ YN R+RRFG S++
Sbjct: 194 RTGGEQRVSNFLLWQLAYTEFYFTDKFWPDFGKPMLLEAIDSYNNRERRFGRTSEQ 249
>gi|259503116|ref|ZP_05746018.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus antri DSM
16041]
gi|259168982|gb|EEW53477.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus antri DSM
16041]
Length = 259
Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats.
Identities = 105/243 (43%), Positives = 157/243 (64%), Gaps = 3/243 (1%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A++ P HI IIMDGNGRWA R LPR AGH++G++ I AA+++G+K LT++A
Sbjct: 17 AAIDLERIPRHIAIIMDGNGRWAQKRHLPRVAGHKQGMQTVKTITIAASKLGVKVLTLYA 76
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW+RP SE++ L++L F L KNN++V V+G+ L + +A
Sbjct: 77 FSTENWKRPSSEVNYLMQLPIRFFSTFVPDLVKNNVRVMVMGDIQRLPAKTQEAVNDAIA 136
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS---DV 179
T G+ L A NY SRDEI+RA++++ +++G++ +D L++++L T+ ++
Sbjct: 137 DTADCDGMVLNFALNYGSRDEITRAVQDVACAVQAGTLSPDAIDEQLVSEHLMTAPLGEL 196
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRT GE+R+S+FLLWQ+AYSE F+PE+WPDF E A+ ++ R RRFGGL
Sbjct: 197 ADPDLLIRTSGEERISNFLLWQLAYSELEFVPEHWPDFDAESLKRAIVEFQGRHRRFGGL 256
Query: 240 SKK 242
K
Sbjct: 257 KNK 259
>gi|153853431|ref|ZP_01994840.1| hypothetical protein DORLON_00829 [Dorea longicatena DSM 13814]
gi|149754217|gb|EDM64148.1| hypothetical protein DORLON_00829 [Dorea longicatena DSM 13814]
Length = 240
Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats.
Identities = 112/234 (47%), Positives = 156/234 (66%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P H+ II+DGNGRWA A+G+PR GH +G + I A +GIK LT++AFS NW
Sbjct: 2 NVPQHVAIILDGNGRWAKAKGMPRNYGHAQGSKNVERICEEAWRMGIKYLTVYAFSTENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E++ L+KL+++++K + KN++KVRVIG+ LD+DI + E E+ T+ N
Sbjct: 62 NRPDDEVNALMKLLRNYMKTCLKTAAKNDMKVRVIGDITRLDEDIQKRILELEEATKNNG 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GLN IA NY SRDE+ RAI+ I +D G V ++ +YLDT +PDPDL+IRT
Sbjct: 122 GLNFQIAINYGSRDEMIRAIRKIAKDCVDGKVDPAEIKEETFEQYLDTKGIPDPDLMIRT 181
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE RLS++LLWQ+AY+EF F WPDFS+E A+ YN RDRR+GG+ ++
Sbjct: 182 SGELRLSNYLLWQLAYTEFYFTDVPWPDFSKEELEKAIETYNHRDRRYGGVKEE 235
>gi|304384316|ref|ZP_07366727.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella marshii DSM
16973]
gi|304334632|gb|EFM00914.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella marshii DSM
16973]
Length = 245
Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats.
Identities = 102/242 (42%), Positives = 150/242 (61%), Gaps = 2/242 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + P HI IIMDGNGRWAA R PR GHR G+E I + +G+K LT+
Sbjct: 1 MTEILDMQRIPRHIAIIMDGNGRWAAERKQPRSYGHRMGVETVRRITSECTRLGVKYLTL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW RP EIS L+ L+ S L+ KNN++ +VIG+ L +++ C L+E
Sbjct: 61 YTFSTENWNRPAEEISALMGLVLSSLEDEI--FMKNNVRFQVIGDMRRLPEEVQCKLQET 118
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ T NT + + +A +YSS+ EI+ A++NI ++++ G + +D + K+L+T+ +P
Sbjct: 119 MEHTAGNTAMTMVVALSYSSKWEITNAVRNIAKEVKEGQMALEAIDEEAVTKHLNTAFMP 178
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DP+L+IRTGGE R+S+FLLWQ+AY+E F YWPDFS + A+ Y R RRFG
Sbjct: 179 DPELLIRTGGELRISNFLLWQIAYAELYFCDTYWPDFSEQELREAIASYQRRQRRFGKTE 238
Query: 241 KK 242
++
Sbjct: 239 EQ 240
>gi|157692332|ref|YP_001486794.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus pumilus
SAFR-032]
gi|157681090|gb|ABV62234.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus pumilus
SAFR-032]
Length = 260
Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats.
Identities = 102/235 (43%), Positives = 142/235 (60%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+++ P+HI IIMDGNGRWA R LPR AGH +G++V + A E+ +K LT++AFS
Sbjct: 26 ILNGEIPEHIAIIMDGNGRWAKKRALPRVAGHHEGMKVVKRMTKLANELNVKVLTLYAFS 85
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+ L+KL + FL L + N++VR+ G+ L ++ A T
Sbjct: 86 TENWKRPKLEVDFLMKLPEEFLNIYLPELIEENVRVRLTGDPDGLPQHTKRAVENAVKST 145
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N GL L A NY R EI A + I + ++ G + + D+ + + YL T + DPDL
Sbjct: 146 TNNDGLVLNFALNYGGRTEIVSACRQISEKVKEGKLQAEDITEEMFSAYLMTESLQDPDL 205
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE RLS+F+LWQ+AYSEFVF WPDFS E A+ +Y R RRFGG+
Sbjct: 206 LIRTSGEIRLSNFMLWQIAYSEFVFTDVLWPDFSDEHLIGAIGEYQRRGRRFGGI 260
>gi|312864358|ref|ZP_07724591.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus downei
F0415]
gi|311100079|gb|EFQ58290.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus downei
F0415]
Length = 251
Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats.
Identities = 102/236 (43%), Positives = 142/236 (60%), Gaps = 4/236 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
P HIGIIMDGNGRWA R PR GH+ G++ + A+E+G+K LT++AFS N
Sbjct: 16 EKIPKHIGIIMDGNGRWAKERLQPRVMGHKAGMDALQRVTIKASELGVKVLTVYAFSTEN 75
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP E+ ++ L F K L KNN++V+V+G+ L ++ A +T+ N
Sbjct: 76 WSRPADEVKFIMNLPVEFFDKYVPELHKNNVRVQVMGDTSKLPQATFDAMERACAKTKHN 135
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPD 183
+GL L A NY R EI+ A++ + Q+++ G + +D LIA L T ++P DPD
Sbjct: 136 SGLVLNFALNYGGRAEIAAAVQALAQEVKDGELDPTAIDEDLIADRLMTKNLPYLYRDPD 195
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
LIIRT GE RLS+FL WQ AYSEF F WPDF+ + A+ ++N R RRFGG+
Sbjct: 196 LIIRTSGELRLSNFLPWQAAYSEFYFTKVLWPDFNEDELVQAIAEFNHRQRRFGGV 251
>gi|312868157|ref|ZP_07728361.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
parasanguinis F0405]
gi|311096561|gb|EFQ54801.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
parasanguinis F0405]
Length = 249
Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats.
Identities = 108/234 (46%), Positives = 140/234 (59%), Gaps = 4/234 (1%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HIGIIMDGNGRWA R PR GH+ G+E E+ AA +G++ LT++AFS NW
Sbjct: 16 VPKHIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQEVTIAAKNMGVQVLTVYAFSTENWT 75
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ ++ L F + L +NN+K+++IG+ L + L L+ AE T+ NTG
Sbjct: 76 RPEDEVKFIMHLPVEFYDRFVPELHRNNVKIQMIGDTKKLPKETLEALERAEAMTQNNTG 135
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLI 185
L L A NY R EI++A+K I Q + V DV +IA YL T +P DPDLI
Sbjct: 136 LILNFALNYGGRAEITQAVKQIAQAVLDAKVSPEDVTEEMIADYLYTESLPQDLRDPDLI 195
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRT GE RLS+FL WQ AYSE F WPDF E A+ +Y+ R RRFGG+
Sbjct: 196 IRTSGEIRLSNFLPWQAAYSELYFTDVMWPDFGEEALRSAIVEYSHRHRRFGGV 249
>gi|330996370|ref|ZP_08320253.1| di-trans,poly-cis-decaprenylcistransferase [Paraprevotella
xylaniphila YIT 11841]
gi|329573228|gb|EGG54842.1| di-trans,poly-cis-decaprenylcistransferase [Paraprevotella
xylaniphila YIT 11841]
Length = 246
Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats.
Identities = 101/239 (42%), Positives = 151/239 (63%), Gaps = 2/239 (0%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ ++ P H+ IIMDGNGRWA A+GLPR AGH++G+E +I A +G+K LT++ F
Sbjct: 6 EIDAARVPRHVAIIMDGNGRWAKAKGLPRTAGHQEGVETVKKITEEAVRLGVKYLTLYTF 65
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RPV EI+ L+ LI L+ KNN++ RVIG+ + + + L+E
Sbjct: 66 STENWNRPVPEIAALMGLILDHLEDEI--FMKNNVRFRVIGDMSRIPEAVRVRLEECMQH 123
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T N + + IA +YSSR E+++A++ I +++++G + + I +L T +PDPD
Sbjct: 124 TAANGKMTMVIALSYSSRWELAQAMRQIAEEVQTGVLSPSRITEETIEAHLVTRFMPDPD 183
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRTGGE R+S++LLWQ AY+EF F YWPDF + F A+ Y R+RRFG S++
Sbjct: 184 LLIRTGGEYRISNYLLWQCAYTEFYFCDTYWPDFDEKEFRKAIADYQSRERRFGKTSEQ 242
>gi|209964516|ref|YP_002297431.1| undecaprenyl pyrophosphate synthetase [Rhodospirillum centenum SW]
gi|209957982|gb|ACI98618.1| undecaprenyl pyrophosphate synthetase [Rhodospirillum centenum SW]
Length = 245
Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats.
Identities = 111/234 (47%), Positives = 157/234 (67%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ +PP H+ IIMDGNGRWA ARGLPR AGHRKG+E + AA E+GI+ LT+++FS
Sbjct: 7 LPQGAPPVHVAIIMDGNGRWATARGLPRTAGHRKGVEAVRRALEAARELGIRYLTLYSFS 66
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP E+S+L++L++ +L+ SL KN +++RVIG+R L DI+ ++ AE T
Sbjct: 67 SENWNRPRDEVSDLMQLLRFYLRGEIASLHKNGVRLRVIGDRSRLSKDIISLIDNAESLT 126
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N L L IA +Y R EI+ + I + +++G + D+D A YL T+ +PDPDL
Sbjct: 127 ASNETLTLVIALSYGGRQEIASTTRQIAEQVKAGHLEPSDIDEGRFANYLSTAGIPDPDL 186
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
IRT GEKR+S+FLLWQ+AY+E VF+ WPDF++ A+ +Y+ RDRRFG
Sbjct: 187 CIRTSGEKRISNFLLWQLAYAELVFVDTLWPDFTKRDLEDAIQEYHRRDRRFGA 240
>gi|153831278|ref|ZP_01983945.1| undecaprenyl diphosphate synthase [Vibrio cholerae 623-39]
gi|148873236|gb|EDL71371.1| undecaprenyl diphosphate synthase [Vibrio cholerae 623-39]
Length = 256
Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats.
Identities = 92/239 (38%), Positives = 147/239 (61%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S+ P HI +IMDGNGRWA A+G PR GH+ G+ + ++ +A +GIK +T+FAF
Sbjct: 11 SLSQDVLPKHIAVIMDGNGRWAKAQGKPRVFGHKNGVAAVRKTISTSARLGIKAVTLFAF 70
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRRP E+ L++L + L L KNN+++RVIG++ + + + +AE
Sbjct: 71 SSENWRRPEEEVGVLMELFMTVLSTEIKKLHKNNLRLRVIGDKSRFSERLQTKIAQAEQL 130
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NTG+ + IA NY + +I +A + + + + G + D+D ++ ++L +D+PD D
Sbjct: 131 TANNTGMVVNIAANYGGQWDILQATQALAEKVTQGELQPSDIDEAVFKQHLTMADLPDVD 190
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRT GE R+S+F+LWQ+AY+E F P +WP+F A+ + R+RRFG ++
Sbjct: 191 LLIRTSGECRISNFMLWQLAYAEMYFTPVFWPEFDENCLIEAVTWFVNRERRFGCTGEQ 249
>gi|194467739|ref|ZP_03073725.1| undecaprenyl diphosphate synthase [Lactobacillus reuteri 100-23]
gi|194452592|gb|EDX41490.1| undecaprenyl diphosphate synthase [Lactobacillus reuteri 100-23]
Length = 254
Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats.
Identities = 108/242 (44%), Positives = 156/242 (64%), Gaps = 3/242 (1%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P HI IIMDGNGRWA R LPR AGH++G++ +I AA+E+G+K L+++AF
Sbjct: 13 QLDMDRIPKHIAIIMDGNGRWAQKRHLPRVAGHKQGMQTVKKITIAASELGVKVLSLYAF 72
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP SE+S L++L F L K+N+KV V+G+ L + +K+A
Sbjct: 73 STENWKRPSSEVSYLMQLPVRFFSTFVPDLVKHNVKVTVMGDITQLPEATQKAVKDAMAD 132
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV---P 180
T TG+ L A NY SRDEI++A K I +D+++G++ D+D + KYL ++ +
Sbjct: 133 TAHCTGMILNFALNYGSRDEITQAAKKIAEDVQNGNLALADIDEASFGKYLMSAQLGQFA 192
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GE+R+S+F+LWQ+AYSE F+PE+WPDF + A+ Y R RRFGGL
Sbjct: 193 DPDLLIRTSGEERISNFMLWQIAYSELEFVPEHWPDFDEDSLRSAIIAYQGRHRRFGGLK 252
Query: 241 KK 242
+
Sbjct: 253 NQ 254
>gi|167759672|ref|ZP_02431799.1| hypothetical protein CLOSCI_02031 [Clostridium scindens ATCC 35704]
gi|167662703|gb|EDS06833.1| hypothetical protein CLOSCI_02031 [Clostridium scindens ATCC 35704]
Length = 240
Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats.
Identities = 108/234 (46%), Positives = 156/234 (66%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P H+ II+DGNGRWA ++G+PR GH +G + I A +G+K LT++AFS NW
Sbjct: 2 NIPQHVAIILDGNGRWAKSKGMPRNYGHAQGSKNVERICEDAYRMGVKYLTVYAFSTENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+ L+KL+++++K + KN++KVRVIG+ LD+DI ++E + T+ N
Sbjct: 62 SRPQDEVDALMKLLRNYMKTCLKTAAKNDMKVRVIGDISRLDEDIRTRIQELTEATKDNG 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GLN IA NY SRDEI RA++ + D G + +D ++ YLDT D+PDPDL+IRT
Sbjct: 122 GLNFQIAINYGSRDEILRAVRRLAGDCVEGRLAPGQIDEAVFESYLDTHDIPDPDLLIRT 181
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE RLS++LLWQ+AY+EF F WPDF++E A+ YN RDRR+GG+ ++
Sbjct: 182 SGELRLSNYLLWQLAYTEFYFTDVPWPDFTKEELAKAIEHYNARDRRYGGVKEE 235
>gi|297584071|ref|YP_003699851.1| undecaprenyl diphosphate synthase [Bacillus selenitireducens MLS10]
gi|297142528|gb|ADH99285.1| undecaprenyl diphosphate synthase [Bacillus selenitireducens MLS10]
Length = 250
Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats.
Identities = 101/239 (42%), Positives = 146/239 (61%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + + P HI IIMDGNGRWA RGLPR AGHR+G+ V A + G+K LT+
Sbjct: 12 MERDIQLDNIPKHIAIIMDGNGRWAKKRGLPRVAGHREGMNTIRRTVRQANKYGVKILTL 71
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E+ L++L + FL K L + N++VR+ G + L + +++A
Sbjct: 72 YAFSTENWKRPRPEVEFLMRLPERFLSKELPELIEQNVRVRITGEKDKLPEYTKRAVEKA 131
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+T N GL L A NY SR E+ + I++I +D++ ++ ++D + L T D+
Sbjct: 132 VAETAHNDGLILNFALNYGSRSEMIQGIQSICRDVKDNNLSIDEIDEACFTGRLMTHDLD 191
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRT GE RLS+F+LWQ+AY+EF F WPDF + F A+ Y R RR+GG+
Sbjct: 192 DPDLLIRTSGEIRLSNFMLWQLAYAEFWFTNVLWPDFKEDDFQEAILVYQNRQRRYGGV 250
>gi|320186595|gb|EFW61320.1| Undecaprenyl pyrophosphate synthetase [Shigella flexneri CDC
796-83]
Length = 253
Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats.
Identities = 92/241 (38%), Positives = 144/241 (59%), Gaps = 4/241 (1%)
Query: 4 SMMSSSPP----DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
++S P H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT
Sbjct: 7 QLLSEKLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALT 66
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++AFS NW RP E+S L++L L SL ++N+++R+IG+ + + +++
Sbjct: 67 LYAFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQECIRK 126
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV 179
+E T NTGL L IA NY R +I + ++ + + ++ G++ +D ++ +++ ++
Sbjct: 127 SEALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHEL 186
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DL+IRTGGE R+S+FLLWQ+AY+E FI WPDF + F ALN + R+RRFGG
Sbjct: 187 APVDLVIRTGGEHRISNFLLWQIAYAELYFIDVLWPDFDEQDFEGALNAFANRERRFGGT 246
Query: 240 S 240
Sbjct: 247 E 247
>gi|312883812|ref|ZP_07743531.1| undecaprenyl pyrophosphate synthetase [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309368561|gb|EFP96094.1| undecaprenyl pyrophosphate synthetase [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 251
Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats.
Identities = 104/239 (43%), Positives = 153/239 (64%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P HI IIMDGNGRWA A+G R GHRKG+ + + +A++GIK LT+FAF
Sbjct: 5 QLSPDLLPKHIAIIMDGNGRWAKAQGKSRVFGHRKGVSAVRKTITMSAKLGIKALTLFAF 64
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RPV E+ L++L S L L KNNI++ ++G+ + + AE+
Sbjct: 65 SSENWQRPVEEVGVLMELFISVLSTEIKKLHKNNIRLCIVGDISRFSKSLQSKILHAENL 124
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
TR N GL + IA NY R +I++A+KNI + +E+GS+ S D+ LI +L +D+P+ D
Sbjct: 125 TRNNDGLVVNIAANYGGRWDITQAVKNITEKVENGSMKSEDISEELIQSHLTMADLPEVD 184
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRT GE R+S+F+LWQ+AY+E F P +WPDF+ + A++ Y R+RRFG S++
Sbjct: 185 LMIRTSGECRISNFMLWQMAYAEMYFTPIFWPDFNEDCLVEAIDWYLNRERRFGCTSEQ 243
>gi|303232719|ref|ZP_07319404.1| di-trans,poly-cis-decaprenylcistransferase [Atopobium vaginae
PB189-T1-4]
gi|302481205|gb|EFL44280.1| di-trans,poly-cis-decaprenylcistransferase [Atopobium vaginae
PB189-T1-4]
Length = 266
Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats.
Identities = 98/239 (41%), Positives = 141/239 (58%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+V + P H+ IIMDGNGRWA ARG R GH+ G+ E V + +GI L++
Sbjct: 28 LVERLNLERIPKHVSIIMDGNGRWAQARGKDRSQGHKAGVAALREAVTTSVRLGIDVLSV 87
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP +E++ L+ L + L + + N+++ IG+ L V +
Sbjct: 88 YAFSTENWKRPQAEVNLLMHLFATTLVRELPLFHQENVRLMFIGDLTQLPQATQDVFAQG 147
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
++T+ NTG+ +A NY SR EI+RA+K + + G++ D+ IA L T+ +P
Sbjct: 148 LEETKHNTGMVFALAVNYGSRSEITRALKLCCKQVHDGTLAIDDITEDTIASRLYTAQLP 207
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRT GE RLS++LLWQ+AYSE P WPDFSR + A+ Y R RRFGGL
Sbjct: 208 DPDLLIRTSGEMRLSNYLLWQLAYSELYVTPVLWPDFSRWDYLRAVIAYQTRTRRFGGL 266
>gi|218131996|ref|ZP_03460800.1| hypothetical protein BACEGG_03619 [Bacteroides eggerthii DSM 20697]
gi|317474404|ref|ZP_07933678.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides eggerthii
1_2_48FAA]
gi|217985872|gb|EEC52212.1| hypothetical protein BACEGG_03619 [Bacteroides eggerthii DSM 20697]
gi|316909085|gb|EFV30765.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides eggerthii
1_2_48FAA]
Length = 244
Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats.
Identities = 102/240 (42%), Positives = 147/240 (61%), Gaps = 2/240 (0%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ S P H+ IIMDGNGRWA RG R GH+ G E + I A+++GIK LT++
Sbjct: 5 EELDLSRIPQHVAIIMDGNGRWAKLRGQERSYGHQAGAETVHIIAEEASKLGIKYLTLYT 64
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RP +E++ L+ L+ +++ + KNNI R+IG+ L D++ L+
Sbjct: 65 FSTENWNRPSNEVAALMALLFDSIEEE--TFMKNNISFRIIGDLTKLPDNVRERLETCVA 122
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTG++L +A +YSS EI+ A + I ++ G + +DS L +++L T+ +PDP
Sbjct: 123 HTANNTGMSLVLAISYSSHWEITEAARQIAILVQKGELAPDRIDSHLFSQHLTTNFMPDP 182
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL+IRTGGE RLS++LLWQ AYSE F YWPDF E A+ Y R+RRFG S++
Sbjct: 183 DLLIRTGGEVRLSNYLLWQCAYSELYFCDTYWPDFREEALHKAIYDYQKRERRFGKTSEQ 242
>gi|156975502|ref|YP_001446409.1| undecaprenyl diphosphate synthase [Vibrio harveyi ATCC BAA-1116]
gi|156527096|gb|ABU72182.1| hypothetical protein VIBHAR_03233 [Vibrio harveyi ATCC BAA-1116]
Length = 251
Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats.
Identities = 102/236 (43%), Positives = 150/236 (63%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S S P HI IIMDGNGRWA ++G PR GH+KG+ + VAAA+++GIK +T+FAFS
Sbjct: 8 SDSLPKHIAIIMDGNGRWAKSKGKPRVFGHKKGVNAVRKTVAAASKLGIKAMTLFAFSSE 67
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+ L++L S L L KNN+++RVIG+ + + + EAE T
Sbjct: 68 NWRRPEEEVGLLMELFISVLSSEVKKLHKNNLRLRVIGDTSRFSERLQGKIAEAEALTAN 127
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTG+ + IA NY + +I+ A K + +G + D++ LI ++L +D+P+ DL+I
Sbjct: 128 NTGMVINIAANYGGKWDITEAAKTLALKARNGEIRVEDINEQLITQHLTMADLPEVDLLI 187
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE R+S+F+LWQ+AY+E F PEYWP+F + A+ + R+RRFG ++
Sbjct: 188 RTSGECRISNFMLWQMAYAEMYFTPEYWPEFGEDSLVEAVTWFINRERRFGCTGEQ 243
>gi|332637696|ref|ZP_08416559.1| undecaprenyl pyrophosphate synthase [Weissella cibaria KACC 11862]
Length = 262
Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats.
Identities = 101/243 (41%), Positives = 152/243 (62%), Gaps = 3/243 (1%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + + P+H+ +IMDGNGRWA + LPR AGH++G+EV +I AA+++G+K LT++
Sbjct: 14 LPQLDKTRIPNHVAVIMDGNGRWAKRQNLPRVAGHQRGMEVVKDITKAASDLGVKVLTLY 73
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP +E+ L+KL F L + N++V V+G L D + +A
Sbjct: 74 AFSTENWKRPETEVGFLMKLPGKFFDTFVPELIEKNVRVNVMGYIDQLPADTQRAVNDAI 133
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS---D 178
QT NTG+ L A NY R EI ++ I + +G + +++ + I L T+ +
Sbjct: 134 AQTANNTGMVLNFALNYGGRAEIVTGVQQIAAQVAAGELQPEEINDATIDAALMTAPLGE 193
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DPD++IRT GE RLS+FLLWQ+AY+EFVFI E+WP+ + +F AL Y RDRRFGG
Sbjct: 194 FADPDVLIRTSGEMRLSNFLLWQLAYAEFVFIDEHWPEVTPAVFEKALAMYQARDRRFGG 253
Query: 239 LSK 241
+++
Sbjct: 254 IAE 256
>gi|126207898|ref|YP_001053123.1| undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae L20]
gi|165975874|ref|YP_001651467.1| undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|303249777|ref|ZP_07335981.1| undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|303252657|ref|ZP_07338820.1| undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|126096690|gb|ABN73518.1| undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|165875975|gb|ABY69023.1| undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|302648625|gb|EFL78818.1| undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|302651344|gb|EFL81496.1| undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
Length = 237
Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats.
Identities = 99/236 (41%), Positives = 140/236 (59%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ P H+ IIMDGNGRWA +G R GH+ G++ V+ AA+ GIK LT++A
Sbjct: 1 MNFDPQKMPQHVAIIMDGNGRWAKQQGKLRVFGHQNGVKAVRSAVSFAAKHGIKVLTLYA 60
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RP +E+S L+ L L L KNNI++ +IGN+ + + + + E+E
Sbjct: 61 FSSENWSRPEAEVSALMALFMRALDSEVKKLHKNNIRLNIIGNKSAFSESLQKRIAESEK 120
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTGL L IA NY S +I++A + + ++ G + D+ + L T P
Sbjct: 121 LTENNTGLILNIAANYGSHWDITQAAQQLAIKVKLGEITVSDITPERLQNALVTGTQPLV 180
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DL+IRT GE+R+S+FLLWQ+AY+E VF P WPDF+ + F A+ Y RDRRFGG
Sbjct: 181 DLLIRTSGEQRISNFLLWQIAYAELVFSPVLWPDFNDDSFSEAIIAYQQRDRRFGG 236
>gi|33152302|ref|NP_873655.1| UPP synthase [Haemophilus ducreyi 35000HP]
gi|42559770|sp|Q7VM20|UPPS_HAEDU RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|33148525|gb|AAP96044.1| undecaprenyl pyrophosphate synthetase [Haemophilus ducreyi 35000HP]
Length = 242
Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats.
Identities = 95/235 (40%), Positives = 137/235 (58%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ S+ P H+ IIMDGNGRWA +G R GH+ G+ V AA+ GIK LT++AF
Sbjct: 6 NFDPSNMPQHVAIIMDGNGRWAKKQGKLRVFGHQNGVNAVRAAVHFAAKYGIKVLTLYAF 65
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP +E+S L+ L L L K+NI++ ++G++ D + + E+E
Sbjct: 66 SSENWNRPATEVSALMSLFIQALNTEVSKLHKHNIRLNILGDKTRFSDSLQKRIIESETL 125
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NT L L IA NY S +I+ A K + + ++ G + D+ + + L T++ P D
Sbjct: 126 TAHNTRLTLNIAANYGSHWDITEATKKLAEKVKLGKISVTDITPEKVQRALVTAEQPPVD 185
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L+IRT GE+R+S+FLLWQ+AY+E F WPDF F A+ Y R+RRFGG
Sbjct: 186 LLIRTSGEQRISNFLLWQIAYAELFFSDVLWPDFDETSFSEAIYAYQQRERRFGG 240
>gi|218133703|ref|ZP_03462507.1| hypothetical protein BACPEC_01572 [Bacteroides pectinophilus ATCC
43243]
gi|217991078|gb|EEC57084.1| hypothetical protein BACPEC_01572 [Bacteroides pectinophilus ATCC
43243]
Length = 270
Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats.
Identities = 103/234 (44%), Positives = 155/234 (66%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P+H+ +I+DGNGRWA R +PR GH +G +V +++ ++G+K T++AFS NW
Sbjct: 35 RVPEHVAVILDGNGRWAKKRLMPRTYGHYQGSKVVEDMLHVVDDMGVKYFTVYAFSTENW 94
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
R E+ L+K+++++L KNN++ RVIG L DIL + E++T+ NT
Sbjct: 95 NRSKDEVDTLMKILRTYLVDCVAKSMKNNVRCRVIGRPDGLSQDILDSIHNLEEKTKNNT 154
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GLN IA NY RDEI RA+K+I ++ +G V D+ +IA++LDT ++PDPDL+IRT
Sbjct: 155 GLNFTIAINYGGRDEIRRAVKSIADEVAAGKVKPDDITEQMIAQHLDTRELPDPDLLIRT 214
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+RLS+FL WQ+AY+EF F WPDF+ + A+ +YN R+RRFGG+ ++
Sbjct: 215 SGEERLSNFLPWQLAYTEFYFTSVLWPDFNEKEMIKAIEKYNKRERRFGGVKEE 268
>gi|254228395|ref|ZP_04921821.1| undecaprenyl diphosphate synthase [Vibrio sp. Ex25]
gi|262393523|ref|YP_003285377.1| undecaprenyl pyrophosphate synthetase [Vibrio sp. Ex25]
gi|151938983|gb|EDN57815.1| undecaprenyl diphosphate synthase [Vibrio sp. Ex25]
gi|262337117|gb|ACY50912.1| undecaprenyl pyrophosphate synthetase [Vibrio sp. Ex25]
Length = 251
Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats.
Identities = 101/236 (42%), Positives = 151/236 (63%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S S P HI IIMDGNGRWA ++G PR GH+KG+ + VAAA+++GIK +T+FAFS
Sbjct: 8 SDSLPKHIAIIMDGNGRWAKSKGKPRVFGHKKGVNAVRKTVAAASKLGIKAMTLFAFSSE 67
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+ L++L + L L KNN+++RVIG+ + + + EAE+ T
Sbjct: 68 NWRRPEEEVGLLMELFITVLSSEVKKLHKNNLRLRVIGDTSRFSERLQKKIVEAENLTAG 127
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTG+ + IA NY + +I+ A K + +G + D++ LI ++L +D+P+ DL+I
Sbjct: 128 NTGMVINIAANYGGKWDITEAAKTLALKARNGEIRVEDINEQLITEHLTMADLPEVDLLI 187
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE R+S+F+LWQ+AY+E F PEYWP+F + A+ + R+RRFG ++
Sbjct: 188 RTSGECRISNFMLWQMAYAEMYFTPEYWPEFDEDSLVEAVTWFINRERRFGCTGEQ 243
>gi|254294075|ref|YP_003060098.1| undecaprenyl diphosphate synthase [Hirschia baltica ATCC 49814]
gi|254042606|gb|ACT59401.1| undecaprenyl diphosphate synthase [Hirschia baltica ATCC 49814]
Length = 259
Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats.
Identities = 103/230 (44%), Positives = 151/230 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA ARGLPR AGH++G+E + V A + I++LT+F+FS NWRR
Sbjct: 23 PKHVAVIMDGNGRWAQARGLPRIAGHKEGVEALRKTVDACKALAIEHLTVFSFSTENWRR 82
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L L+K F+KK L K ++VR+ G+ L DIL ++ E E +T N
Sbjct: 83 PKAEVDALFALLKLFVKKDLNRLHKEGVRVRIFGSLDGLPADILKLIDECESKTAQNKVF 142
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
N+ IAFNY R EI A + I D+++G + +D S++ +++ +SD+PD DL+IRT G
Sbjct: 143 NVNIAFNYGGRAEIVEAAQKIAADVQAGRLSPESIDESIMQQHMWSSDLPDVDLLIRTSG 202
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E R+S+FLLW +AYSE +F+ WPDF + A++ + R+RRFGG+
Sbjct: 203 ELRISNFLLWGIAYSELMFLDILWPDFGKVDMERAIDVFKNRNRRFGGVE 252
>gi|15642254|ref|NP_231887.1| undecaprenyl diphosphate synthase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|147675134|ref|YP_001217771.1| undecaprenyl diphosphate synthase [Vibrio cholerae O395]
gi|153820413|ref|ZP_01973080.1| undecaprenyl diphosphate synthase [Vibrio cholerae NCTC 8457]
gi|9656817|gb|AAF95400.1| undecaprenyl diphosphate synthase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|126509041|gb|EAZ71635.1| undecaprenyl diphosphate synthase [Vibrio cholerae NCTC 8457]
gi|146317017|gb|ABQ21556.1| undecaprenyl diphosphate synthase [Vibrio cholerae O395]
gi|227014152|gb|ACP10362.1| undecaprenyl diphosphate synthase [Vibrio cholerae O395]
Length = 256
Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats.
Identities = 92/239 (38%), Positives = 146/239 (61%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S+ P HI +IMDGNGRWA A+G PR GH+ G+ + ++ +A +GIK +T+FAF
Sbjct: 11 SLSQDVLPKHIAVIMDGNGRWAKAQGKPRVFGHKNGVAAVRKTISTSARLGIKAVTLFAF 70
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRRP E+ L++L + L L KNN+++RVIG++ + + + +AE
Sbjct: 71 SSENWRRPEEEVGVLMELFMTVLSTEIKKLHKNNLRLRVIGDKSRFSERLQTKIAQAEQL 130
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NTG+ + IA NY + +I +A + + + + G + D+D + ++L +D+PD D
Sbjct: 131 TASNTGMVVNIAANYGGQWDILQATQALAEKVTQGELQPSDIDEDVFKQHLTMADLPDVD 190
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRT GE R+S+F+LWQ+AY+E F P +WP+F A+ + R+RRFG ++
Sbjct: 191 LLIRTSGECRISNFMLWQLAYAEMYFTPVFWPEFDENCLIEAVTWFVNRERRFGCTGEQ 249
>gi|187731191|ref|YP_001878976.1| undecaprenyl pyrophosphate synthase [Shigella boydii CDC 3083-94]
gi|187428183|gb|ACD07457.1| di-trans,poly-cis-decaprenylcistransferase [Shigella boydii CDC
3083-94]
Length = 252
Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats.
Identities = 91/239 (38%), Positives = 142/239 (59%), Gaps = 4/239 (1%)
Query: 6 MSSSPP----DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+S P H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++
Sbjct: 8 LSEKLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY 67
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+S L++L L SL ++N+++R+IG+ + + ++++E
Sbjct: 68 AFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQECIRKSE 127
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T NTGL L IA NY R +I + ++ + + ++ G++ +D ++ +++ ++
Sbjct: 128 ALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAP 187
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRTGGE R+S+FLLWQ+AY+E F WPDF + F ALN + R+RRFGG
Sbjct: 188 VDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGGTE 246
>gi|284048713|ref|YP_003399052.1| undecaprenyl diphosphate synthase [Acidaminococcus fermentans DSM
20731]
gi|283952934|gb|ADB47737.1| undecaprenyl diphosphate synthase [Acidaminococcus fermentans DSM
20731]
Length = 263
Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats.
Identities = 99/238 (41%), Positives = 146/238 (61%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P H+ IIMDGNGRWA A+G PR GH G IV A +GIK L+++AFS
Sbjct: 26 LQPDLIPCHVAIIMDGNGRWARAQGKPRTFGHAAGARTLRRIVKFADHLGIKALSVYAFS 85
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RPV+E+ ++ L+ +L + N+++R +G+R L + + A D T
Sbjct: 86 TENWKRPVTEVRFIMDLLCQYLTSELEEFNQYNVRIRFMGSREGLPAIVQEKMDHALDVT 145
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NTG+ L IA NY + E+ A++ I ++ G++ ++ I ++L T +P PDL
Sbjct: 146 KDNTGIILNIAINYGGQRELVEAVREIAGSVQQGTLTPDAINEKTIEEHLYTRGLPAPDL 205
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IRTGG+ R+S+F+LWQ+AYSEF P +WPDFS EL A+ Y RDRRFGGL++K
Sbjct: 206 LIRTGGDLRVSNFMLWQIAYSEFWTTPVFWPDFSEELLTEAVFSYQKRDRRFGGLNQK 263
>gi|17230487|ref|NP_487035.1| undecaprenyl pyrophosphate synthetase [Nostoc sp. PCC 7120]
gi|20140456|sp|P58563|UPPS1_ANASP RecName: Full=Undecaprenyl pyrophosphate synthase 1; Short=UPP
synthase 1; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase 1;
AltName: Full=Undecaprenyl diphosphate synthase 1;
Short=UDS 1
gi|17132089|dbj|BAB74694.1| undecaprenyl pyrophosphate synthetase [Nostoc sp. PCC 7120]
Length = 249
Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats.
Identities = 86/235 (36%), Positives = 140/235 (59%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P H+ +IMDGNGRWA +GLPR GH++G++ +++ + GI+ LT +AFS
Sbjct: 15 LKRELLPKHVAVIMDGNGRWAKRQGLPRIMGHKRGVDALKDLLRCCRDWGIQALTAYAFS 74
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+ L+ L + L++ + + N++++ +GN +L + + + ++T
Sbjct: 75 TENWKRPQEEVEFLMTLFQRVLRQELREMVEENVQIQFVGNLTALPRSLQAEISRSMEET 134
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ N G+ +A NY R EI +A + I Q ++ G + +++ + ++L T+ + DPDL
Sbjct: 135 KNNRGIRFSVATNYGGRQEILQACRAIAQKVQQGLLQPDEINEEVFERHLYTAGISDPDL 194
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE RLS+FLLWQ+AY E WPDF R F AL Y R+RRFG +
Sbjct: 195 LIRTSGEMRLSNFLLWQMAYGEIYITDTLWPDFDRTEFHRALCAYQQRERRFGKV 249
>gi|229507670|ref|ZP_04397175.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae BX 330286]
gi|229512135|ref|ZP_04401614.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae B33]
gi|229519270|ref|ZP_04408713.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae RC9]
gi|229607174|ref|YP_002877822.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae MJ-1236]
gi|255747048|ref|ZP_05420993.1| undecaprenyl pyrophosphate synthetase [Vibrio cholera CIRS 101]
gi|262161408|ref|ZP_06030518.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae INDRE 91/1]
gi|42560015|sp|Q9KPV6|UPPS_VIBCH RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|229343959|gb|EEO08934.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae RC9]
gi|229352100|gb|EEO17041.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae B33]
gi|229355175|gb|EEO20096.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae BX 330286]
gi|229369829|gb|ACQ60252.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae MJ-1236]
gi|255735450|gb|EET90850.1| undecaprenyl pyrophosphate synthetase [Vibrio cholera CIRS 101]
gi|262028719|gb|EEY47373.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae INDRE 91/1]
Length = 250
Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats.
Identities = 92/239 (38%), Positives = 146/239 (61%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S+ P HI +IMDGNGRWA A+G PR GH+ G+ + ++ +A +GIK +T+FAF
Sbjct: 5 SLSQDVLPKHIAVIMDGNGRWAKAQGKPRVFGHKNGVAAVRKTISTSARLGIKAVTLFAF 64
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRRP E+ L++L + L L KNN+++RVIG++ + + + +AE
Sbjct: 65 SSENWRRPEEEVGVLMELFMTVLSTEIKKLHKNNLRLRVIGDKSRFSERLQTKIAQAEQL 124
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NTG+ + IA NY + +I +A + + + + G + D+D + ++L +D+PD D
Sbjct: 125 TASNTGMVVNIAANYGGQWDILQATQALAEKVTQGELQPSDIDEDVFKQHLTMADLPDVD 184
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRT GE R+S+F+LWQ+AY+E F P +WP+F A+ + R+RRFG ++
Sbjct: 185 LLIRTSGECRISNFMLWQLAYAEMYFTPVFWPEFDENCLIEAVTWFVNRERRFGCTGEQ 243
>gi|194014998|ref|ZP_03053615.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus pumilus ATCC
7061]
gi|194014024|gb|EDW23589.1| di-trans,poly-cis-decaprenylcistransferase [Bacillus pumilus ATCC
7061]
Length = 260
Score = 296 bits (757), Expect = 2e-78, Method: Composition-based stats.
Identities = 102/235 (43%), Positives = 142/235 (60%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+++ P+HI IIMDGNGRWA R LPR AGH +G++V + A E+ +K LT++AFS
Sbjct: 26 ILNGEIPEHIAIIMDGNGRWAKKRALPRVAGHHEGMKVVKRMTKLANELNVKVLTLYAFS 85
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+ L+KL + FL L + N++VR+ G+ L ++ A T
Sbjct: 86 TENWKRPKLEVDFLMKLPEEFLNIYLPELIEENVRVRLTGDPDGLPQHTKRAVENAVKST 145
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N GL L A NY R EI A + I + ++ G + + D+ + + YL T + DPDL
Sbjct: 146 TNNDGLILNFALNYGGRTEIVSACRQISEKVKEGKLQAEDITEEMFSAYLMTESLQDPDL 205
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE RLS+F+LWQ+AYSEFVF WPDFS E A+ +Y R RRFGG+
Sbjct: 206 LIRTSGEIRLSNFMLWQIAYSEFVFTDVLWPDFSDEHLIGAIGEYQRRGRRFGGI 260
>gi|325299197|ref|YP_004259114.1| Undecaprenyl pyrophosphate synthase [Bacteroides salanitronis DSM
18170]
gi|324318750|gb|ADY36641.1| Undecaprenyl pyrophosphate synthase [Bacteroides salanitronis DSM
18170]
Length = 246
Score = 296 bits (757), Expect = 2e-78, Method: Composition-based stats.
Identities = 105/238 (44%), Positives = 146/238 (61%), Gaps = 2/238 (0%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ S P HI IIMDGNGRWA RG+ R GH+ G E + I AA +G+K LT++ FS
Sbjct: 7 IDKSRIPAHIAIIMDGNGRWAKQRGMARSYGHQAGAETVHAIAEEAARLGVKYLTLYTFS 66
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+S L+ L+ +++ +L KNNI+ R+IG L D+ L + T
Sbjct: 67 TENWKRPAEEVSALMSLLMDSIEE--DTLMKNNIRFRIIGETEKLPADVFERLNQCIAHT 124
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NTG+ L +A +YSS+ EI+ A+K I +E+ + D+ I ++L T +PDPDL
Sbjct: 125 AGNTGMCLVLALSYSSKWEITEAVKQIASQVENHQLAIADITDQTIDRFLSTRFMPDPDL 184
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IRTGGE RLS++LLWQ AYSE F +WPDF E F A+ Y R+RRFG S++
Sbjct: 185 LIRTGGEIRLSNYLLWQCAYSELYFCDTFWPDFKEEEFCKAIYDYQQRERRFGKTSEQ 242
>gi|147677592|ref|YP_001211807.1| undecaprenyl pyrophosphate synthase [Pelotomaculum
thermopropionicum SI]
gi|146273689|dbj|BAF59438.1| undecaprenyl pyrophosphate synthase [Pelotomaculum
thermopropionicum SI]
Length = 266
Score = 296 bits (757), Expect = 2e-78, Method: Composition-based stats.
Identities = 105/242 (43%), Positives = 147/242 (60%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + S P HI IIMDGNGRWA RG PR GHR G+E +IV A +E+ I LT+
Sbjct: 25 LLKKLDRSRLPKHIAIIMDGNGRWAQRRGFPRAYGHRAGVESLRDIVKACSELQIPILTV 84
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E+ L+ L+ +L K L ++ +++ IG L LK A
Sbjct: 85 YAFSTENWKRPQEEVDILMDLLVEYLNKEIDELCRSGVRINPIGRLGDLPRQAQDALKMA 144
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
D +R N GL L +A NY R EI A+++I D+E G + ++D +I++ L T+ P
Sbjct: 145 TDCSRNNKGLILNLALNYGGRTEIVDAVRSIAADVEKGLLRPGEIDDKVISERLYTAGQP 204
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IR G+ R+S+FLLWQ+AY+EF P WPDF R A++ + R+RRFGGL
Sbjct: 205 DPDLLIRPAGDFRISNFLLWQLAYTEFWLTPVMWPDFRRVHLLRAIDDFQRRERRFGGLI 264
Query: 241 KK 242
KK
Sbjct: 265 KK 266
>gi|119471163|ref|ZP_01613695.1| undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans-poly-cis-decaprenylcistransferase)
[Alteromonadales bacterium TW-7]
gi|119445819|gb|EAW27101.1| undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans-poly-cis-decaprenylcistransferase)
[Alteromonadales bacterium TW-7]
Length = 259
Score = 296 bits (757), Expect = 2e-78, Method: Composition-based stats.
Identities = 96/239 (40%), Positives = 145/239 (60%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ P H+ IIMDGNGRWA AR PR GH+KG++ + V ++G+++LT+FAF
Sbjct: 13 TISQQCLPKHVAIIMDGNGRWAQARNRPRVYGHKKGVDAVRQSVQFCTKLGVQSLTLFAF 72
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRRP E++ L++L L K L KNN+K+ +IG+ + + + A+
Sbjct: 73 SSENWRRPEDEVNTLMELFLFVLTKEVKKLHKNNVKLTIIGDLSRFSEGLQNKVHSAQQL 132
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NTGL L +A NY R +++ A K + + SG + + D+ IA+++ +D P+PD
Sbjct: 133 TENNTGLCLNVAANYGGRWDMANAAKQLAMQVASGDIDAQDITEERIAQHISMADQPEPD 192
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRTGG+ R+S+FLLWQ AY+E F WPDF+ F A+ Y R+RRFG ++
Sbjct: 193 LLIRTGGDVRISNFLLWQAAYAELYFTETLWPDFNEAAFAEAIACYVARERRFGCTGEQ 251
>gi|167746790|ref|ZP_02418917.1| hypothetical protein ANACAC_01502 [Anaerostipes caccae DSM 14662]
gi|167653750|gb|EDR97879.1| hypothetical protein ANACAC_01502 [Anaerostipes caccae DSM 14662]
Length = 235
Score = 296 bits (757), Expect = 2e-78, Method: Composition-based stats.
Identities = 109/235 (46%), Positives = 160/235 (68%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M S P+H+ II+DGNGRWA R LPR GH +G + I+ A ++GIK LT++AFS
Sbjct: 1 MESMRVPEHVAIILDGNGRWAKKRFLPRNMGHAQGSKTVERIIEDAFDMGIKYLTVYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRRP E+ L+KL++ +LK KNN++VRVIG+ L +D+ +++ E+ +
Sbjct: 61 TENWRRPKDEVDALMKLLRDYLKTCIKRANKNNMRVRVIGDVTGLSEDLREKIEQLEEAS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NTG+N IA NY SRDE+ RA+K + D+ +G++ D+ + A+YLDT +P+PDL
Sbjct: 121 KGNTGINFTIALNYGSRDEMIRAMKKMAGDLLAGTLKKEDITEDVFAEYLDTKGIPEPDL 180
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE+RLS+F+LWQ+AY+EF F WPDF+++ A+ YN R+RRFGG+
Sbjct: 181 MIRTSGEQRLSNFMLWQLAYTEFYFTDVLWPDFNKKELKKAVEYYNGRERRFGGI 235
>gi|24380152|ref|NP_722107.1| undecaprenyl pyrophosphate synthase [Streptococcus mutans UA159]
gi|42559978|sp|Q8DSJ7|UPPS_STRMU RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|24378153|gb|AAN59413.1|AE015006_6 putative undecaprenyl pyrophosphate synthetase [Streptococcus
mutans UA159]
Length = 249
Score = 296 bits (757), Expect = 2e-78, Method: Composition-based stats.
Identities = 109/239 (45%), Positives = 145/239 (60%), Gaps = 4/239 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ S P HIGIIMDGNGRWA R PR GH+ G++ ++ AA+E+G+K LT++AFS
Sbjct: 11 IKLSKIPAHIGIIMDGNGRWAKKRMKPRVFGHKAGMDALQDVTIAASELGVKILTVYAFS 70
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP E+ ++ L F K L KNN+++ VIG++ L L L+ A + T
Sbjct: 71 TENWARPQEEVKFIMNLPVEFFDKYVPKLHKNNVRILVIGDKEELPAATLDALERARELT 130
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP---- 180
+ N+GL L A NY R EI A+K I QD+ D+ LIA YL TS++P
Sbjct: 131 KHNSGLILNFALNYGGRAEIVDAVKLIAQDVLDARFNPGDITEGLIADYLMTSNLPYLYR 190
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDLIIRT GE RLS+FL WQ AYSE F WPDF ++ + A+ ++N R RRFGG+
Sbjct: 191 DPDLIIRTSGELRLSNFLPWQAAYSELYFTDTLWPDFDKKALYLAIEEFNHRHRRFGGV 249
>gi|239636262|ref|ZP_04677264.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus warneri
L37603]
gi|239597617|gb|EEQ80112.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus warneri
L37603]
Length = 256
Score = 296 bits (757), Expect = 2e-78, Method: Composition-based stats.
Identities = 100/238 (42%), Positives = 153/238 (64%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P+H+ IIMDGNGRWA R +PR GH +G++ ++ A+++GIK LT++AFS
Sbjct: 19 LDLHNIPEHVAIIMDGNGRWAKQRKMPRIKGHYEGMQTIKKVTREASDIGIKYLTLYAFS 78
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP SE++ ++ L +FLK L + N+KV IG + L + + A+++T
Sbjct: 79 TENWSRPESEVNYIMNLPVNFLKTFLPELIEKNVKVETIGFQKGLPTSTIEAIDHAKEKT 138
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NTGL L A NY R EI ++ K I +++ + S D++ LI ++L T + PDP+L
Sbjct: 139 KNNTGLRLIFAINYGGRAEIVQSFKTIVDELQHKGLSSDDINEDLINQHLMTKNYPDPEL 198
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IRT GE+R+S+FL+WQV+YSEF+F + WPDF + + L Y R RRFGGLS++
Sbjct: 199 LIRTSGEQRISNFLIWQVSYSEFIFNEKLWPDFDGDELKNCLKIYQSRQRRFGGLSEE 256
>gi|315127160|ref|YP_004069163.1| undecaprenyl pyrophosphate synthetase [Pseudoalteromonas sp.
SM9913]
gi|315015674|gb|ADT69012.1| undecaprenyl pyrophosphate synthetase [Pseudoalteromonas sp.
SM9913]
Length = 259
Score = 296 bits (757), Expect = 2e-78, Method: Composition-based stats.
Identities = 95/239 (39%), Positives = 144/239 (60%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ P H+ IIMDGNGRWA AR PR GH+KG++ + V ++GI++LT+FAF
Sbjct: 13 TISQQCLPKHVAIIMDGNGRWAQARNRPRVYGHKKGVDAVRQSVQFCTKLGIQSLTLFAF 72
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRRP E++ L++L L K L KNN+K+ +IG+ + + + A++
Sbjct: 73 SSENWRRPEDEVNTLMELFLFVLSKEVKKLHKNNVKLTIIGDLSRFSESLRAKVHTAQEL 132
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NTGL+L +A NY R +++ A K + + +G + D+ IA+++ +D PD
Sbjct: 133 TANNTGLHLNVAANYGGRWDMTHAAKQVALQVANGEIDPADITEEHIAQHMSMADQAQPD 192
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRTGG+ R+S+FLLWQ AY+E F WPDF+ F A+ Y R+RRFG ++
Sbjct: 193 LLIRTGGDVRISNFLLWQAAYAELYFTNTLWPDFNEAAFAEAIACYVARERRFGCTGEQ 251
>gi|329724317|gb|EGG60829.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU144]
Length = 256
Score = 296 bits (757), Expect = 2e-78, Method: Composition-based stats.
Identities = 100/234 (42%), Positives = 148/234 (63%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P+H+ IIMDGNGRWA R +PR GH +G++ +I A+++GIK LT++AFS NW
Sbjct: 23 NIPEHVAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITREASDLGIKYLTLYAFSTENW 82
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP SE++ ++ L +FLK L + N+K+ IG L + + A+ +T+ NT
Sbjct: 83 SRPESEVNYIMNLPVNFLKTFLPELIEKNVKIETIGFYDGLPQSTIDAIDFAKAKTQHNT 142
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL L A NY R EI +++K I+ +++ S +D +LI ++L T PDPDL+IRT
Sbjct: 143 GLTLVFAINYGGRAEIIQSMKTIYNELQLNGQGSEVIDEALIKRHLMTHSYPDPDLLIRT 202
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+R+S+FL+WQ +YSEF+F + WPDF + L Y R RRFGGLS++
Sbjct: 203 SGEQRISNFLIWQASYSEFIFNEKLWPDFDEKELRECLKIYQSRQRRFGGLSEE 256
>gi|282896305|ref|ZP_06304327.1| Di-trans-poly-cis-decaprenylcistransferase [Raphidiopsis brookii
D9]
gi|281198801|gb|EFA73680.1| Di-trans-poly-cis-decaprenylcistransferase [Raphidiopsis brookii
D9]
Length = 249
Score = 296 bits (757), Expect = 2e-78, Method: Composition-based stats.
Identities = 88/237 (37%), Positives = 136/237 (57%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P H+ +IMDGNGRWA +GLPR GH++G++ ++ + GI+ LT
Sbjct: 11 LPPDLKPELLPKHVAVIMDGNGRWAKGQGLPRIMGHKRGVDALKNLLRCCKDWGIQALTA 70
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP E+ L+ L + L++ + + N++++ +GN +L + + +
Sbjct: 71 YAFSTENWNRPHEEVEFLMTLFQGVLRQELREMVEENVEIQFVGNLQALPVALQREISHS 130
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+TR N + +A NY R EI +A + I Q ++ G + ++ L A +L T+ +
Sbjct: 131 MAETRGNQSIKFTVATNYGGRQEIVQACQAIAQKVKEGLLNPEEISEELFAGHLYTAGIA 190
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DPDL+IRT GE RLS+FLLWQ+AY+E WPDF R F AL Y R+RRFG
Sbjct: 191 DPDLLIRTSGEMRLSNFLLWQMAYAEIYITDTLWPDFGRREFHLALLAYQQRERRFG 247
>gi|302670319|ref|YP_003830279.1| undecaprenyl pyrophosphate synthase UppS [Butyrivibrio
proteoclasticus B316]
gi|302394792|gb|ADL33697.1| undecaprenyl pyrophosphate synthase UppS [Butyrivibrio
proteoclasticus B316]
Length = 240
Score = 296 bits (757), Expect = 2e-78, Method: Composition-based stats.
Identities = 107/235 (45%), Positives = 160/235 (68%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S+ P H+ II+DGNGRWA A+G+PR GH +G + +I+ A ++GIK LT++AFS N
Sbjct: 5 SNIPQHVAIILDGNGRWAKAKGMPRNYGHMQGAKAVEDILVDARDIGIKYLTVYAFSTEN 64
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP +E+S L+ +++++LK KNN++ RVIG++ L +DI ++E E+ T N
Sbjct: 65 WTRPEAEVSALMTILRNYLKTSIKKSMKNNVRCRVIGDKSGLSEDIQEAIRELEEATAGN 124
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
TGL IA NY SRDEI+RA++ + + +++G + + D+ +IA+ LDT+ +PDPDL+IR
Sbjct: 125 TGLTFTIAINYGSRDEITRAVRKVAEKVQNGEITAADITQDMIAENLDTNYLPDPDLLIR 184
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
T E+R+S++LLWQ AYSEF F WPDF +E A+ Y R R+FGGL +
Sbjct: 185 TCNEQRISNYLLWQCAYSEFYFTEVAWPDFDKEQLLKAVEAYGNRTRKFGGLKTE 239
>gi|221632995|ref|YP_002522218.1| undecaprenyl diphosphate synthase [Thermomicrobium roseum DSM 5159]
gi|221156565|gb|ACM05692.1| undecaprenyl diphosphate synthase [Thermomicrobium roseum DSM 5159]
Length = 327
Score = 296 bits (757), Expect = 2e-78, Method: Composition-based stats.
Identities = 102/238 (42%), Positives = 145/238 (60%), Gaps = 4/238 (1%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
++ S P H+ IIMDGNGRWA RGLPR AGHR G E I AAE+GI+ LT++A
Sbjct: 78 EAVCSDRVPVHVAIIMDGNGRWATQRGLPRLAGHRAGTENIRPITFKAAELGIRYLTLWA 137
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP E+ L++++ +++ L ++ ++R IG+ L + + EA +
Sbjct: 138 FSTENWRRPRDEVEGLMQILSEVIERETEELHRHGAQLRHIGSLEGLSPSLQRQIHEAIE 197
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T+ N + L IAFNY R E+ +AI+ I + V +D + + +YL T+ +PDP
Sbjct: 198 LTKHNDRIVLTIAFNYGGRAELVQAIRRIVAE----GVPPEMIDEATVERYLYTAGMPDP 253
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DLIIRT GE R S+F LWQ AY+E+ F P WPDF+ + F A+ + R+RRFGGL
Sbjct: 254 DLIIRTSGELRTSNFFLWQAAYAEYYFTPTLWPDFTPDEFERAIRDFQRRERRFGGLQ 311
>gi|16332030|ref|NP_442758.1| undecaprenyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
gi|2501568|sp|Q55482|UPPS_SYNY3 RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|1001342|dbj|BAA10829.1| sll0506 [Synechocystis sp. PCC 6803]
Length = 249
Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats.
Identities = 89/239 (37%), Positives = 137/239 (57%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P H+ +IMDGNGRWA RG+PR GH++G++ ++ + GI LT
Sbjct: 11 LPPDLDQQRLPQHVAVIMDGNGRWAKQRGMPRIMGHQRGVDSLKNLLRCCDDWGIAALTA 70
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP+ E+ L+ L + L++ + N+++R +GN SL + + +
Sbjct: 71 YAFSTENWGRPLEEVEFLMTLFERVLRRELKEMMAENVRIRFVGNLTSLPRSLQDEIARS 130
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ T+ NTG+ +A NY R EI + I ++++SG + +D ++ KYL T +
Sbjct: 131 MEDTKNNTGIRFTVATNYGGRQEIVHVCQAIAREVQSGKLDPETIDEGVVEKYLYTEGLS 190
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDL+IRT GE R+S+FLLWQ+AY+E WPDF R+ F AL Y R RRFG +
Sbjct: 191 HPDLLIRTSGELRISNFLLWQMAYAEIYVTSTLWPDFDRQAFHLALRDYQQRHRRFGKV 249
>gi|281412822|ref|YP_003346901.1| undecaprenyl diphosphate synthase [Thermotoga naphthophila RKU-10]
gi|281373925|gb|ADA67487.1| undecaprenyl diphosphate synthase [Thermotoga naphthophila RKU-10]
Length = 233
Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats.
Identities = 103/231 (44%), Positives = 145/231 (62%), Gaps = 2/231 (0%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ IIMDGNGRWA RGLPR GH++G +V + V + E+GIK LT F+FS NW
Sbjct: 2 RIPQHVAIIMDGNGRWAKKRGLPRIKGHQRGAKVLHNTVKWSLEMGIKYLTAFSFSTENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP E+ L+ L + + L+K ++VR++G + L + +L +E E++T+
Sbjct: 62 KRPKEEVEFLMDLFVQMIDREMELLRKERVRVRILGRKEGLSEKVLKKWQEVEEKTKEFD 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+ L IAFNY R EI A+++I +D+ G ++ +YL DVPDPDLIIRT
Sbjct: 122 RMTLVIAFNYGGRREILDAVESILKDVSQGKKI--ELTEETFRQYLYLPDVPDPDLIIRT 179
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE RLS+FLLWQ AYSE F + WPDF+++ F A+ Y+ R+RRFGGL
Sbjct: 180 SGEMRLSNFLLWQSAYSELYFFKKPWPDFTKKDFLRAIESYSKRERRFGGL 230
>gi|269960595|ref|ZP_06174967.1| Undecaprenyl diphosphate synthase [Vibrio harveyi 1DA3]
gi|269834672|gb|EEZ88759.1| Undecaprenyl diphosphate synthase [Vibrio harveyi 1DA3]
Length = 251
Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats.
Identities = 102/236 (43%), Positives = 150/236 (63%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S S P HI IIMDGNGRWA ++G PR GH+KG+ + VAAA+++GIK +T+FAFS
Sbjct: 8 SDSLPKHIAIIMDGNGRWAKSKGKPRVFGHKKGVNAVRKTVAAASKLGIKAMTLFAFSSE 67
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+ L++L S L L KNN+++RVIG+ + + + EAE T
Sbjct: 68 NWRRPEEEVGLLMELFISVLSSEVKKLHKNNLRLRVIGDTSRFSERLQGKIIEAEALTAG 127
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTG+ + IA NY + +I+ A K + +G + D++ LI ++L +D+P+ DL+I
Sbjct: 128 NTGMVINIAANYGGKWDITEAAKTLALKARNGEIRVEDINEQLITQHLTMADLPEVDLLI 187
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE R+S+F+LWQ+AY+E F PEYWP+F + A+ + R+RRFG ++
Sbjct: 188 RTSGECRISNFMLWQMAYAEMYFTPEYWPEFDEDSLVEAVTWFINRERRFGCTGEQ 243
>gi|254849386|ref|ZP_05238736.1| undecaprenyl diphosphate synthase [Vibrio cholerae MO10]
gi|254845091|gb|EET23505.1| undecaprenyl diphosphate synthase [Vibrio cholerae MO10]
Length = 253
Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats.
Identities = 92/239 (38%), Positives = 146/239 (61%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S+ P HI +IMDGNGRWA A+G PR GH+ G+ + ++ +A +GIK +T+FAF
Sbjct: 8 SLSQDVLPKHIAVIMDGNGRWAKAQGKPRVFGHKNGVAAVRKTISTSARLGIKAVTLFAF 67
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRRP E+ L++L + L L KNN+++RVIG++ + + + +AE
Sbjct: 68 SSENWRRPEEEVGVLMELFMTVLSTEIKKLHKNNLRLRVIGDKSRFSERLQTKIAQAEQL 127
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NTG+ + IA NY + +I +A + + + + G + D+D + ++L +D+PD D
Sbjct: 128 TASNTGMVVNIAANYGGQWDILQATQALAEKVTQGELQPSDIDEDVFKQHLTMADLPDVD 187
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRT GE R+S+F+LWQ+AY+E F P +WP+F A+ + R+RRFG ++
Sbjct: 188 LLIRTSGECRISNFMLWQLAYAEMYFTPVFWPEFDENCLIEAVTWFVNRERRFGCTGEQ 246
>gi|329116210|ref|ZP_08244927.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
parauberis NCFD 2020]
gi|326906615|gb|EGE53529.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
parauberis NCFD 2020]
Length = 249
Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats.
Identities = 112/235 (47%), Positives = 146/235 (62%), Gaps = 4/235 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HIGIIMDGNGRWA R PR GH+ G++ E+ AA+++GIK LT++AFS NW
Sbjct: 15 KIPKHIGIIMDGNGRWAKKRLKPRIFGHKAGMDALQEVTIAASDLGIKVLTVYAFSTENW 74
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E++ ++ L F K L KNN+++++IG L + L L A ++TR N+
Sbjct: 75 SRPEDEVNFIMNLPVEFFDKYVPELNKNNVRIQMIGETHRLPEATLTALNNAIERTRRNS 134
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDL 184
GL L A NY R EI+ A++NI QD+ ++ D+ LIA YL T +P DPD
Sbjct: 135 GLILNFALNYGGRAEITLAVRNIAQDVLDANLNPGDITEDLIANYLMTDHLPYLYRDPDY 194
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IIRT GE RLS+FL WQ AYSEF F P WPDF +E AL +YN R RRFGG+
Sbjct: 195 IIRTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKQEQLIEALEEYNRRQRRFGGV 249
>gi|154248355|ref|YP_001419313.1| undecaprenyl diphosphate synthase [Xanthobacter autotrophicus Py2]
gi|154162440|gb|ABS69656.1| undecaprenyl diphosphate synthase [Xanthobacter autotrophicus Py2]
Length = 255
Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats.
Identities = 123/232 (53%), Positives = 165/232 (71%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+G+IMDGNGRWA +R LPR GHR+G+E V AA EVGI+ LTI++FS NW
Sbjct: 20 VPVHVGVIMDGNGRWATSRKLPRVEGHRRGVEALRRCVRAAREVGIRFLTIYSFSSENWS 79
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP++E+ EL+ L+K FL+ L +N++V+VIG R +L DI +L +AE T NTG
Sbjct: 80 RPLTEVRELMGLLKLFLRHDLADLHADNVRVKVIGERDNLAPDIRQLLVDAEALTCNNTG 139
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L +AFNY SR EI+ A+ I D+ +G V DVD +I++ L+T+ +PDPDLI+RT
Sbjct: 140 LTLVVAFNYGSRQEIAAAVSRIAADVAAGRVRPQDVDVDMISQRLETAGIPDPDLIVRTS 199
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
GE+RLS+FLLWQ AYSEFVF+P YWPDF + A+++Y RDRRFGG++K
Sbjct: 200 GEQRLSNFLLWQAAYSEFVFLPIYWPDFDKAALLAAIDEYARRDRRFGGVTK 251
>gi|313901105|ref|ZP_07834593.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium sp. HGF2]
gi|312954063|gb|EFR35743.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium sp. HGF2]
Length = 234
Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats.
Identities = 113/235 (48%), Positives = 150/235 (63%), Gaps = 1/235 (0%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M + P HI IIMDGNGRWA RGLPR AGH++G E +I A +G+K LT +AFS
Sbjct: 1 MDTRIIPQHIAIIMDGNGRWAKKRGLPRTAGHKQGAENIRKIAIACNTMGVKALTCYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+ L KL K F + LKKNNIKV +G D+ V+ A +QT
Sbjct: 61 TENWKRPQDEVDYLCKLPKLFFNRYLAELKKNNIKVTFLGEIERFPDETRRVITTAVEQT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NTGL L +A NY SR EI+ A + QD++ G V +D Y+ T+D+P+ DL
Sbjct: 121 QENTGLILCLAVNYGSRREITLAAQRYAQDVQQGKVSPE-IDEDAFGSYMMTADMPELDL 179
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE R+S+FLLWQ+AY+E +F P WPDFS+E A++++N R+RRFGGL
Sbjct: 180 MIRTSGELRISNFLLWQLAYAELIFTPVAWPDFSQEELNRAIDEFNHRNRRFGGL 234
>gi|251793252|ref|YP_003007980.1| di-trans,poly-cis-decaprenylcistransferase [Aggregatibacter
aphrophilus NJ8700]
gi|247534647|gb|ACS97893.1| di-trans,poly-cis-decaprenylcistransferase [Aggregatibacter
aphrophilus NJ8700]
Length = 239
Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats.
Identities = 97/239 (40%), Positives = 141/239 (58%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + ++ P HI IIMDGNGRWA +G R GH+ G+ E V+ A ++G+K LT++
Sbjct: 1 MTELDPNNIPQHIAIIMDGNGRWAKQQGKMRIFGHKHGVAAVREAVSYARKIGVKYLTLY 60
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+S L+ L L L KN+I+++++GN + +K+AE
Sbjct: 61 AFSSENWSRPEQEVSALMNLFMQALDFEVKKLHKNDIRLKILGNISRFSAGLQEKIKKAE 120
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T NT L L IA NY R +I +A + + Q ++ + ++D L+ ++L T D P+
Sbjct: 121 KLTENNTALTLNIAANYGGRWDIVQAAQQLAQQVQEQRLTVTEIDEVLLQQHLVTKDEPE 180
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRT GE+R+S+FLLWQVAY+E F WPDF+ F A+ Y R RRFGG
Sbjct: 181 VDLLIRTSGEQRISNFLLWQVAYAELYFSDVLWPDFNETEFHQAILSYQQRHRRFGGTE 239
>gi|322386934|ref|ZP_08060558.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus cristatus
ATCC 51100]
gi|321269216|gb|EFX52152.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus cristatus
ATCC 51100]
Length = 249
Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats.
Identities = 108/234 (46%), Positives = 145/234 (61%), Gaps = 4/234 (1%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HIGIIMDGNGRWA R PR GH+ G+E E+ AA E+G++ LT++AFS NW
Sbjct: 16 VPKHIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQEVTIAAKEMGVQVLTVYAFSTENWT 75
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+S ++ L F + L +NN+K+++IG+ L L++AED TRLNTG
Sbjct: 76 RPEKEVSFIMNLPVEFYDRYVPELHRNNVKIQMIGDTKRLPKATFEALEKAEDLTRLNTG 135
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLI 185
L L A NY R EI++A++ + QD+ V D+ ++ YL TS +P DPDL+
Sbjct: 136 LILNFALNYGGRAEINQAVQKLAQDVLDAKVQPADITEEMLGDYLYTSSLPVSLRDPDLV 195
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRT GE RLS+FL WQ AYSE F WPDF + A+ +YN R+RRFGG+
Sbjct: 196 IRTSGELRLSNFLPWQTAYSELYFTDILWPDFDEKALKDAVVEYNRRNRRFGGV 249
>gi|85859434|ref|YP_461636.1| undecaprenyl pyrophosphate synthetase [Syntrophus aciditrophicus
SB]
gi|85722525|gb|ABC77468.1| undecaprenyl pyrophosphate synthetase [Syntrophus aciditrophicus
SB]
Length = 261
Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats.
Identities = 102/241 (42%), Positives = 147/241 (60%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + P HI IIMDGNGRWA L R GH+KG E + V E+G+K LT++
Sbjct: 13 LKDLDPDKMPRHIAIIMDGNGRWAEKHTLGRIFGHKKGAEAVHVAVRTCRELGVKYLTLY 72
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFSI NW RP EI+ L+ L++ +L + + I+++VIG+ SL D + L++
Sbjct: 73 AFSIENWFRPTIEINALMNLLEEYLSSQLEEMMEYRIRLKVIGDFNSLRDSVKKKLRDVM 132
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
D+T N + L +A +Y RDEI A+K I +D G + ++D L + YL T+++PD
Sbjct: 133 DKTASNDAMTLTLALSYGGRDEILSAVKQILKDGMEGRIKPENLDRELFSHYLYTAEMPD 192
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL+IRT GE R+S+F LWQ+AY+EF F WPDFSR+ A+ Y R+RRFG S+
Sbjct: 193 PDLLIRTSGEYRISNFCLWQIAYTEFHFTEVLWPDFSRDDMIRAIADYQSRERRFGMTSE 252
Query: 242 K 242
+
Sbjct: 253 Q 253
>gi|86609106|ref|YP_477868.1| undecaprenyl diphosphate synthase [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86557648|gb|ABD02605.1| undecaprenyl diphosphate synthase [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 248
Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats.
Identities = 89/238 (37%), Positives = 135/238 (56%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ A + P H+ ++MDGNGRWA RGLPR GH++G+ E++ + GI LT
Sbjct: 11 LPADLDPQLLPRHVAVVMDGNGRWAQKRGLPRSVGHQRGVAALKELLRCCDDWGIPALTA 70
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW R E+ L+ L + L + + + ++++ G +L + + A
Sbjct: 71 YAFSTENWGRAREEVDFLMTLFEQVLWQELGEMVQQGVRIQFAGQLSALPHSLQETIVHA 130
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
T+ N G+ L +A NY R EI +A ++I ++ G + +D +L +++L T+ +
Sbjct: 131 VACTQHNKGICLTVALNYGGRQEILQACRSIATLVQQGLLQPDQIDEALFSQFLYTTGLS 190
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DPDL+IRT GE R+S+FLLWQ+AY+E F P WPDF R F AL Y R RRFG
Sbjct: 191 DPDLLIRTSGEMRISNFLLWQMAYTEQYFTPILWPDFDRAAFHQALLSYQSRQRRFGR 248
>gi|228474968|ref|ZP_04059696.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus hominis
SK119]
gi|314936579|ref|ZP_07843926.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus hominis
subsp. hominis C80]
gi|228270953|gb|EEK12341.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus hominis
SK119]
gi|313655198|gb|EFS18943.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus hominis
subsp. hominis C80]
Length = 256
Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats.
Identities = 100/234 (42%), Positives = 151/234 (64%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P+HI IIMDGNGRWA R +PR GH +G++ ++ A+ +GIK LT++AFS NW
Sbjct: 23 NLPEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKVTRQASHLGIKYLTLYAFSTENW 82
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP SE++ ++ L +FLK L + N+K+ IG ++ + + A+++T+ NT
Sbjct: 83 SRPESEVNYIMNLPVNFLKTFLPELIEKNVKIETIGFLDAVPQSTIEAINYAKEKTKNNT 142
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL L A NY R E+ +++K+I+ +++ S D+D +I+K+L T PDPDL+IRT
Sbjct: 143 GLKLVFAINYGGRAELVQSMKSIYDELQRNGQNSDDIDELMISKHLMTHPYPDPDLLIRT 202
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+RLS+FL+WQ +YSEF+F + WPDF E + Y R RRFGGLS++
Sbjct: 203 SGEQRLSNFLIWQASYSEFIFNEKLWPDFDGEELKQCIKIYQSRQRRFGGLSEE 256
>gi|312970274|ref|ZP_07784456.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
1827-70]
gi|310337772|gb|EFQ02883.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
1827-70]
Length = 252
Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats.
Identities = 92/246 (37%), Positives = 147/246 (59%), Gaps = 6/246 (2%)
Query: 1 MVASM--MSSSPP----DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVG 54
M++++ +S P H+ IIMDGNGRWA +G R GH+ G + V+ AA G
Sbjct: 1 MLSAIQPLSEKLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNG 60
Query: 55 IKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDIL 114
I+ LT++AFS NW RP E+S L++L L SL ++N+++R+IG+ + +
Sbjct: 61 IEALTLYAFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQ 120
Query: 115 CVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYL 174
++++E T NTGL L IA NY R +I + ++ + + ++ G++ +D ++ +++
Sbjct: 121 ERIRKSEALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHV 180
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
++ DL+IRTGGE R+S+FLLWQ+AY+E F WPDF + F ALN + R+R
Sbjct: 181 CMHELAPVDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRER 240
Query: 235 RFGGLS 240
RFGG
Sbjct: 241 RFGGTE 246
>gi|28378682|ref|NP_785574.1| di-trans-poly-cis-decaprenylcistransferase [Lactobacillus plantarum
WCFS1]
gi|300768195|ref|ZP_07078100.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus plantarum
subsp. plantarum ATCC 14917]
gi|308180823|ref|YP_003924951.1| di-trans-poly-cis-decaprenylcistransferase [Lactobacillus plantarum
subsp. plantarum ST-III]
gi|42559804|sp|Q88VJ8|UPPS_LACPL RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|28271518|emb|CAD64423.1| di-trans-poly-cis-decaprenylcistransferase [Lactobacillus plantarum
WCFS1]
gi|300494259|gb|EFK29422.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus plantarum
subsp. plantarum ATCC 14917]
gi|308046314|gb|ADN98857.1| di-trans-poly-cis-decaprenylcistransferase [Lactobacillus plantarum
subsp. plantarum ST-III]
Length = 259
Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats.
Identities = 101/241 (41%), Positives = 145/241 (60%), Gaps = 3/241 (1%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P H+ IIMDGNGRWA AR LPR AGH++G+ +I AA+++G+K LT++AF
Sbjct: 17 QLDPERIPAHVAIIMDGNGRWAKARHLPRVAGHKEGMNTVKKITIAASDLGVKVLTLYAF 76
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP E++ L++L SF L KNN++V+V+G L + ++ A
Sbjct: 77 STENWKRPTDEVNYLMQLPVSFFDTFVPDLIKNNVRVQVMGYVDHLPEATQKAVQNAIAD 136
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV---P 180
T+ G+ L A NY SR EI ++ I Q ++ G + D+D + I L T+ +
Sbjct: 137 TKDCDGMVLNFALNYGSRAEIVTGVQKIAQQVQDGQLAVGDIDDATIDAALMTAPLAPYN 196
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GE+R+S+FL+WQ+AYSE VF WPDF+ + + RDRRFGGLS
Sbjct: 197 DPDLLIRTSGEERISNFLMWQIAYSELVFTDVKWPDFTAATLQACIADFQSRDRRFGGLS 256
Query: 241 K 241
Sbjct: 257 D 257
>gi|186682351|ref|YP_001865547.1| undecaprenyl pyrophosphate synthase [Nostoc punctiforme PCC 73102]
gi|186464803|gb|ACC80604.1| undecaprenyl diphosphate synthase [Nostoc punctiforme PCC 73102]
Length = 236
Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats.
Identities = 98/232 (42%), Positives = 145/232 (62%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI +IMDGNGRWA +RGLPR AGHR+G E++ + GIK LT +AFS NW+
Sbjct: 1 MPQHIAVIMDGNGRWATSRGLPRIAGHRQGASTLKELLRCCKDWGIKALTAYAFSTENWQ 60
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP+ E+ L+ L + L + + + +++ IG+ +L + ++ + +T N
Sbjct: 61 RPIEEVDFLMHLFERLLHRELAQMHQEGVRISFIGDLSALPKSLQMEMERSMTETLNNQA 120
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
++ +A NY SR+EI+R + + Q +E G + + V+ SL+ ++L T+D P+PDL+IRT
Sbjct: 121 IHFTVAVNYGSRNEITRVCRQVAQLVEQGELSAEQVNESLVEQHLYTADTPEPDLLIRTS 180
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
GE RLS+FLLWQ+AY+E F WPDF+RE F AL Y RDRRFG +
Sbjct: 181 GEMRLSNFLLWQMAYTEMYFTDILWPDFNREAFHQALLSYQSRDRRFGQVKA 232
>gi|167762049|ref|ZP_02434176.1| hypothetical protein BACSTE_00397 [Bacteroides stercoris ATCC
43183]
gi|167700141|gb|EDS16720.1| hypothetical protein BACSTE_00397 [Bacteroides stercoris ATCC
43183]
Length = 244
Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats.
Identities = 103/240 (42%), Positives = 149/240 (62%), Gaps = 2/240 (0%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ S P H+ IIMDGNGRWA RG R GH+ G E + I A+++GIK LT++
Sbjct: 5 EELDLSRIPQHVAIIMDGNGRWAKLRGQERSYGHQAGAETVHVIAEEASKLGIKYLTLYT 64
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RP +E++ L+ L+ +++ + KNNI RVIG+ L D++ L+
Sbjct: 65 FSTENWNRPSNEVAALMALLFDSIEEE--TFMKNNISFRVIGDLTKLPDNVRERLETCIA 122
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTG++L +A +YSSR EI+ A + + ++ G + +DS+L+++YL T +PDP
Sbjct: 123 HTANNTGMSLVLAISYSSRWEITEAARRLAVLVQKGELTPEQIDSTLLSQYLATDFMPDP 182
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL+IRTGGE RLS++LLWQ AYSE F YWPDF A++ Y R+RRFG S++
Sbjct: 183 DLLIRTGGEIRLSNYLLWQCAYSELYFCDTYWPDFREAELHKAIHDYQKRERRFGKTSEQ 242
>gi|257084481|ref|ZP_05578842.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis Fly1]
gi|256992511|gb|EEU79813.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis Fly1]
Length = 271
Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats.
Identities = 101/240 (42%), Positives = 144/240 (60%), Gaps = 4/240 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
P HI IIMDGNGRWA R LPR AGH++G++ +I A+ +G+K LT++AFS
Sbjct: 22 KEGQIPQHIAIIMDGNGRWAQNRRLPRIAGHKEGMDTVKKITKHASHLGVKVLTLYAFST 81
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP E++ L++L F L K N+KV V+G + L +K A +QT+
Sbjct: 82 ENWKRPTDEVNFLMQLPVDFFDTFVPELIKENVKVNVMGYQEFLPSHTQDAVKRAIEQTK 141
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----D 181
NTG+ L A NY +R E+ A+K I ++ + S ++ IA +L T +P D
Sbjct: 142 DNTGMVLNFALNYGARAELLTAMKQIAAEVSEKTYTSDEITEETIADHLMTGFLPTELRD 201
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
P+L+IRT GE+R+S+FLLWQ+AYSE F WPDFS + A+ + R+RRFGGL +
Sbjct: 202 PELLIRTSGEERISNFLLWQIAYSELFFTKALWPDFSGDTLETAIASFQNRNRRFGGLKE 261
>gi|229513898|ref|ZP_04403360.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae TMA 21]
gi|229522202|ref|ZP_04411619.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae TM 11079-80]
gi|229528741|ref|ZP_04418131.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae 12129(1)]
gi|229332515|gb|EEN98001.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae 12129(1)]
gi|229341127|gb|EEO06132.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae TM 11079-80]
gi|229349079|gb|EEO14036.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae TMA 21]
gi|327484772|gb|AEA79179.1| Undecaprenyl pyrophosphate synthetase [Vibrio cholerae LMA3894-4]
Length = 250
Score = 295 bits (755), Expect = 4e-78, Method: Composition-based stats.
Identities = 92/239 (38%), Positives = 147/239 (61%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S+ P HI +IMDGNGRWA A+G PR GH+ G+ + ++ +A +GIK +T+FAF
Sbjct: 5 SLSQDVLPKHIAVIMDGNGRWAKAQGKPRVFGHKNGVAAVRKTISTSARLGIKAVTLFAF 64
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRRP E+ L++L + L L KNN+++RVIG++ + + + +AE
Sbjct: 65 SSENWRRPEEEVGVLMELFMTVLSTEIKKLHKNNLRLRVIGDKSRFSERLQTKIAQAEQL 124
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NTG+ + IA NY + +I +A + + + + G + D+D ++ ++L +D+PD D
Sbjct: 125 TASNTGMVVNIAANYGGQWDILQATQALAEKVTQGELQPSDIDEAVFKQHLTMADLPDVD 184
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRT GE R+S+F+LWQ+AY+E F P +WP+F A+ + R+RRFG ++
Sbjct: 185 LLIRTSGECRISNFMLWQLAYAEMYFTPVFWPEFDENCLIEAVTWFVNRERRFGCTGEQ 243
>gi|153803008|ref|ZP_01957594.1| undecaprenyl diphosphate synthase [Vibrio cholerae MZO-3]
gi|297580899|ref|ZP_06942824.1| undecaprenyl diphosphate synthase [Vibrio cholerae RC385]
gi|124121451|gb|EAY40194.1| undecaprenyl diphosphate synthase [Vibrio cholerae MZO-3]
gi|297534725|gb|EFH73561.1| undecaprenyl diphosphate synthase [Vibrio cholerae RC385]
Length = 256
Score = 295 bits (755), Expect = 4e-78, Method: Composition-based stats.
Identities = 92/239 (38%), Positives = 147/239 (61%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S+ P HI +IMDGNGRWA A+G PR GH+ G+ + ++ +A +GIK +T+FAF
Sbjct: 11 SLSQDVLPKHIAVIMDGNGRWAKAQGKPRVFGHKNGVAAVRKTISTSARLGIKAVTLFAF 70
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRRP E+ L++L + L L KNN+++RVIG++ + + + +AE
Sbjct: 71 SSENWRRPEEEVGVLMELFMTVLSTEIKKLHKNNLRLRVIGDKSRFSERLQTKIAQAEQL 130
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NTG+ + IA NY + +I +A + + + + G + D+D ++ ++L +D+PD D
Sbjct: 131 TASNTGMVVNIAANYGGQWDILQATQALAEKVTQGELQPSDIDEAVFKQHLTMADLPDVD 190
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRT GE R+S+F+LWQ+AY+E F P +WP+F A+ + R+RRFG ++
Sbjct: 191 LLIRTSGECRISNFMLWQLAYAEMYFTPVFWPEFDENCLIEAVTWFVNRERRFGCTGEQ 249
>gi|188494705|ref|ZP_03001975.1| undecaprenyl diphosphate synthase [Escherichia coli 53638]
gi|188489904|gb|EDU65007.1| undecaprenyl diphosphate synthase [Escherichia coli 53638]
Length = 252
Score = 295 bits (755), Expect = 4e-78, Method: Composition-based stats.
Identities = 91/239 (38%), Positives = 142/239 (59%), Gaps = 4/239 (1%)
Query: 6 MSSSPP----DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+S P H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++
Sbjct: 8 LSEKLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY 67
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+S L++L L SL ++N+++R+IG+ + + ++++E
Sbjct: 68 AFSSENWNRPAQEVSALMELFVGALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSE 127
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T NTGL L IA NY R +I + ++ + + ++ G++ +D ++ +++ ++
Sbjct: 128 ALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAP 187
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRTGGE R+S+FLLWQ+AY+E F WPDF + F ALN + R+RRFGG
Sbjct: 188 VDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGGTE 246
>gi|193216379|ref|YP_001997578.1| undecaprenyl diphosphate synthase [Chloroherpeton thalassium ATCC
35110]
gi|193089856|gb|ACF15131.1| undecaprenyl diphosphate synthase [Chloroherpeton thalassium ATCC
35110]
Length = 301
Score = 295 bits (755), Expect = 4e-78, Method: Composition-based stats.
Identities = 96/237 (40%), Positives = 154/237 (64%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+S + P+HI IIMDGNGRWA ++G R +GH G++ +IV A A++G+K LT++AFS
Sbjct: 40 VSGAIPEHIAIIMDGNGRWAKSQGQVRVSGHHAGLKSVRDIVEACAQLGVKYLTLYAFSK 99
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NWRRP +E++ L++L+ L++ L +NNI++ VIGN L + VL ++ +
Sbjct: 100 ENWRRPKTEVAALMRLLVRALREETQKLHENNIRLNVIGNMQDLPQKVSAVLHDSMALMK 159
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
NT + L +A +YS R EI +A K I ++++ G + ++ + +YL T+ +P+P+L+
Sbjct: 160 QNTKMTLTLALSYSGRWEILQATKRIAEEVKKGFLHPDEITDATFEQYLATAGMPNPELL 219
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRT GE RLS+FLLWQ+AY+E +WPDF R + A+ + R+RR+G S++
Sbjct: 220 IRTSGEFRLSNFLLWQLAYTEIYISNNFWPDFRRNQLYDAIRAFQQRERRYGLTSEQ 276
>gi|227513175|ref|ZP_03943224.1| di-trans-poly-cis-decaprenylcistransferase (undecaprenyl
diphosphate synthetase) [Lactobacillus buchneri ATCC
11577]
gi|227524390|ref|ZP_03954439.1| di-trans-poly-cis-decaprenylcistransferase (undecaprenyl
diphosphate synthetase) [Lactobacillus hilgardii ATCC
8290]
gi|227083556|gb|EEI18868.1| di-trans-poly-cis-decaprenylcistransferase (undecaprenyl
diphosphate synthetase) [Lactobacillus buchneri ATCC
11577]
gi|227088621|gb|EEI23933.1| di-trans-poly-cis-decaprenylcistransferase (undecaprenyl
diphosphate synthetase) [Lactobacillus hilgardii ATCC
8290]
Length = 254
Score = 295 bits (755), Expect = 4e-78, Method: Composition-based stats.
Identities = 107/241 (44%), Positives = 151/241 (62%), Gaps = 3/241 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ S P HI IIMDGNGRWA R LPR AGHR+G+E + AA+++G+K LT++AFS
Sbjct: 14 LDSDRIPKHIAIIMDGNGRWAKKRHLPRIAGHRQGMETVKTVTMAASKLGVKVLTLYAFS 73
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+S L+ L F L +NN+KV V+G L ++ +++A QT
Sbjct: 74 TENWKRPKDEVSFLMGLPVKFFNNFVPELIENNVKVSVMGLIDQLPENTQKAVRDAISQT 133
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT---SDVPD 181
TG+ L A NY SR +I A++NI +I++ ++ D+D LI+++L T D D
Sbjct: 134 SKCTGMILNFALNYGSRLDIRLAVQNIASEIKNDAISISDIDDDLISRHLMTGFLGDYAD 193
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL+IRT GE+R+S+FLLWQ+AYSE VF WPDF + + +Y R+RRFGGL
Sbjct: 194 PDLLIRTSGEERISNFLLWQIAYSELVFTDALWPDFDGQTLRQMIFEYQHRNRRFGGLKN 253
Query: 242 K 242
+
Sbjct: 254 E 254
>gi|308068690|ref|YP_003870295.1| Undecaprenyl pyrophosphate synthetase (UPP synthetase)
[Paenibacillus polymyxa E681]
gi|305857969|gb|ADM69757.1| Undecaprenyl pyrophosphate synthetase (UPP synthetase)
[Paenibacillus polymyxa E681]
Length = 255
Score = 295 bits (755), Expect = 4e-78, Method: Composition-based stats.
Identities = 105/237 (44%), Positives = 147/237 (62%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ + P H+ +IMDGNGRWA G+PR GH+ G++ AA E+GIK LT+FAF
Sbjct: 19 AISKDNIPQHVAVIMDGNGRWAKRIGMPRIVGHQNGMKAVKRTAIAADELGIKYLTLFAF 78
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP E+ L++L + FL L + N++VR++GN+ L + L EA +
Sbjct: 79 STENWTRPKDEVDFLMRLPQEFLAIELDELIEKNVQVRMMGNKEHLPSHTVEALTEATRR 138
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NTGL L A NY SR EI+ ++ + + I G + + D+ S LI L +S +PDPD
Sbjct: 139 TENNTGLVLNFALNYGSRLEITECMQTLGRQIADGKLKTEDITSELIGNTLLSSGMPDPD 198
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
L+IRT GE RLS+F+LWQ+AYSE F YWP+F RE + A+ +Y R RR+GGL
Sbjct: 199 LLIRTSGELRLSNFMLWQLAYSELWFTDIYWPEFKREHLYEAVIEYQQRTRRYGGLK 255
>gi|290579877|ref|YP_003484269.1| putative undecaprenyl pyrophosphate synthetase [Streptococcus
mutans NN2025]
gi|254996776|dbj|BAH87377.1| putative undecaprenyl pyrophosphate synthetase [Streptococcus
mutans NN2025]
Length = 249
Score = 295 bits (755), Expect = 4e-78, Method: Composition-based stats.
Identities = 109/239 (45%), Positives = 145/239 (60%), Gaps = 4/239 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ S P HIGIIMDGNGRWA R PR GH+ G++ ++ AA+E+G+K LT++AFS
Sbjct: 11 IKLSKIPAHIGIIMDGNGRWAKKRMKPRVFGHKAGMDALQDVTIAASELGVKILTVYAFS 70
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP E+ ++ L F K L KNN+++ VIG++ L L L+ A + T
Sbjct: 71 TENWARPQEEVKFIMNLPVEFFDKYVPKLHKNNVRILVIGDKEELPAATLDALERARELT 130
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP---- 180
+ N+GL L A NY R EI A+K I QD+ D+ LIA YL TS++P
Sbjct: 131 KHNSGLILNFALNYGGRAEIVGAVKLIAQDVLDARFNPGDITEGLIADYLMTSNLPYLYR 190
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDLIIRT GE RLS+FL WQ AYSE F WPDF ++ + A+ ++N R RRFGG+
Sbjct: 191 DPDLIIRTSGELRLSNFLPWQAAYSELYFTDTLWPDFDKKALYLAIEEFNHRHRRFGGV 249
>gi|242242543|ref|ZP_04796988.1| undecaprenyl pyrophosphatase synthetase [Staphylococcus epidermidis
W23144]
gi|242233970|gb|EES36282.1| undecaprenyl pyrophosphatase synthetase [Staphylococcus epidermidis
W23144]
Length = 256
Score = 295 bits (755), Expect = 4e-78, Method: Composition-based stats.
Identities = 100/234 (42%), Positives = 148/234 (63%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P+H+ IIMDGNGRWA R +PR GH +G++ +I A+++GIK LT++AFS NW
Sbjct: 23 NIPEHVAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITREASDLGIKYLTLYAFSTENW 82
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP SE++ ++ L +FLK L + N+K+ IG L + + A+ +T+ NT
Sbjct: 83 SRPESEVNYIMNLPVNFLKTFLPELIEKNVKIETIGFYEGLPQSTINAIDFAKAKTQNNT 142
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL L A NY R EI +++K I+ +++ S +D +LI ++L T PDPDL+IRT
Sbjct: 143 GLTLVFAINYGGRAEIIQSMKTIYNELQLNGQGSDVIDEALIKRHLMTHSYPDPDLLIRT 202
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+R+S+FL+WQ +YSEF+F + WPDF + L Y R RRFGGLS++
Sbjct: 203 SGEQRISNFLIWQASYSEFIFNEKLWPDFDEKELRECLKIYQSRQRRFGGLSEE 256
>gi|325280790|ref|YP_004253332.1| Undecaprenyl pyrophosphate synthase [Odoribacter splanchnicus DSM
20712]
gi|324312599|gb|ADY33152.1| Undecaprenyl pyrophosphate synthase [Odoribacter splanchnicus DSM
20712]
Length = 262
Score = 295 bits (755), Expect = 4e-78, Method: Composition-based stats.
Identities = 98/241 (40%), Positives = 154/241 (63%), Gaps = 1/241 (0%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
++++ P+HI IIMDGNGRWA RGL R GH++G++ +V A+ E+G+K LT++
Sbjct: 6 EEIIAAGLPEHIAIIMDGNGRWAEQRGLDRVYGHKQGVDTVKSVVEASGEIGLKYLTLYT 65
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FSI NW RP +E+ L+ L+ + + L + ++V+VIGN L +++ L+
Sbjct: 66 FSIENWNRPRAEVDALMGLMTDAIIRETSELMRQKVRVKVIGNTGDLPEEVWHKLEGLIH 125
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGS-VCSHDVDSSLIAKYLDTSDVPD 181
+T NTG+ L +A +Y +R EI A + + D ++G + +V L A+YL T+ +PD
Sbjct: 126 RTAANTGVTLVLALSYGARWEIVEAARRLMADYKAGKVTDTEEVTDELFARYLTTAGIPD 185
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL+IRT GE RLS+FLLWQ AY+EF FI ++WPDF ++ + A+ + R+RRFG +
Sbjct: 186 PDLLIRTSGECRLSNFLLWQCAYTEFYFIDKFWPDFEKDDLYLAIRNFQQRERRFGMTGE 245
Query: 242 K 242
+
Sbjct: 246 Q 246
>gi|323142323|ref|ZP_08077155.1| di-trans,poly-cis-decaprenylcistransferase [Phascolarctobacterium
sp. YIT 12067]
gi|322413207|gb|EFY04094.1| di-trans,poly-cis-decaprenylcistransferase [Phascolarctobacterium
sp. YIT 12067]
Length = 262
Score = 295 bits (755), Expect = 4e-78, Method: Composition-based stats.
Identities = 94/235 (40%), Positives = 150/235 (63%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IIMDGNGRWA A+G R GH+ G E IV AA ++G+K ++ +AFS
Sbjct: 25 LDMQNIPQHIAIIMDGNGRWAKAQGKVRTFGHQAGAETLKTIVRAADKLGVKVISAYAFS 84
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RPV+E++ +++L+ +L +NN++VR IG+R L + + ++ A + T
Sbjct: 85 TENWKRPVTEVNFIMELLSRYLTNEIDEFNENNVQVRFIGSRKGLPEIVQQKMEHAIEAT 144
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NTG+ L +A NY + EI A++ I + +G++ D+D+++I +L T +P PDL
Sbjct: 145 KNNTGIILNLAINYGGQAEILHAVRTIAAEAANGTLAVDDIDNNVIENHLYTKGLPAPDL 204
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IR GG+ R+S+FLLWQ+AY+E +WP+F+ + A+ Y R+RRFGGL
Sbjct: 205 LIRPGGDLRISNFLLWQIAYAEIWTTKVFWPEFTPDHLVEAILAYQGRERRFGGL 259
>gi|254556880|ref|YP_003063297.1| di-trans-poly-cis-decaprenylcistransferase [Lactobacillus plantarum
JDM1]
gi|254045807|gb|ACT62600.1| di-trans-poly-cis-decaprenylcistransferase [Lactobacillus plantarum
JDM1]
Length = 259
Score = 295 bits (755), Expect = 4e-78, Method: Composition-based stats.
Identities = 101/241 (41%), Positives = 145/241 (60%), Gaps = 3/241 (1%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P H+ IIMDGNGRWA AR LPR AGH++G+ +I AA+++G+K LT++AF
Sbjct: 17 QLNPERIPAHVAIIMDGNGRWAKARHLPRVAGHKEGMNTVKKITIAASDLGVKVLTLYAF 76
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP E++ L++L SF L KNN++V+V+G L + ++ A
Sbjct: 77 STENWKRPTDEVNYLMQLPVSFFDTFVPDLIKNNVRVQVMGYVDHLPEATQKAVQNAIAD 136
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV---P 180
T+ G+ L A NY SR EI ++ I Q ++ G + D+D + I L T+ +
Sbjct: 137 TKDCDGMVLNFALNYGSRAEIVTGVQKIAQQVQDGQLAVGDIDDATIDAALMTAPLAPYN 196
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GE+R+S+FL+WQ+AYSE VF WPDF+ + + RDRRFGGLS
Sbjct: 197 DPDLLIRTSGEERISNFLMWQIAYSELVFTDVKWPDFTAATLQACIADFQSRDRRFGGLS 256
Query: 241 K 241
Sbjct: 257 D 257
>gi|160915169|ref|ZP_02077382.1| hypothetical protein EUBDOL_01177 [Eubacterium dolichum DSM 3991]
gi|158432968|gb|EDP11257.1| hypothetical protein EUBDOL_01177 [Eubacterium dolichum DSM 3991]
Length = 236
Score = 295 bits (755), Expect = 4e-78, Method: Composition-based stats.
Identities = 104/231 (45%), Positives = 144/231 (62%), Gaps = 1/231 (0%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI IIMDGNGRWA RGLPR AGH++G E +I A ++GI+ LT +AFS NW+
Sbjct: 6 MPRHIAIIMDGNGRWAKKRGLPRTAGHKQGAENIRKIAIACNDLGIEALTCYAFSTENWK 65
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ L KL K F + L KNNI+V +G + V++ A ++T++NTG
Sbjct: 66 RPEEEVDYLCKLPKLFFHRYLAELIKNNIRVTFLGEIERFPQETRNVIETAVEKTKMNTG 125
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
LNL +A NY + EI A++ +++ G +DV + YL T +P+ DL+IRT
Sbjct: 126 LNLCLAVNYGGQREIVLAVRKYTREVIDGKRK-NDVTEEEFSSYLMTKGMPEVDLMIRTS 184
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
GE+R+S+FLL+Q+AYSE VF WPDF R+ A+ Y R+RRFGGL+
Sbjct: 185 GEERISNFLLYQLAYSELVFTETAWPDFDRDALEKAIEIYQHRNRRFGGLA 235
>gi|332140474|ref|YP_004426212.1| undecaprenyl diphosphate synthase [Alteromonas macleodii str. 'Deep
ecotype']
gi|327550496|gb|AEA97214.1| undecaprenyl diphosphate synthase [Alteromonas macleodii str. 'Deep
ecotype']
Length = 261
Score = 295 bits (755), Expect = 4e-78, Method: Composition-based stats.
Identities = 98/240 (40%), Positives = 150/240 (62%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + +++ P H+ IIMDGNGRWA +G R GH+ G+E +V A + GI++LT+FA
Sbjct: 16 APVATTTGPKHVAIIMDGNGRWAQKKGKIRTFGHKAGVESVRAVVRFARQNGIESLTLFA 75
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW+RP E+S L+ L L L KN ++++VIG+ + D ++ +++AED
Sbjct: 76 FSSENWKRPEEEVSVLMDLFNLVLNSEAKRLHKNGVRLQVIGDVEAFDAKLVEKIRKAED 135
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T+ N L L IA NY R +I A K + ++SG + D+ + ++ T+++P+
Sbjct: 136 MTKDNKDLVLNIAANYGGRWDIVNAAKQLASQVKSGELDVQDITEDALNAHISTANLPEL 195
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL+IRTGGE R+S+FLLWQ AY+E F WPDF+ ++F A+N YN+R RRFG ++
Sbjct: 196 DLLIRTGGEHRISNFLLWQCAYAELYFTDVLWPDFNEDVFQLAVNDYNVRQRRFGLTGEQ 255
>gi|317504633|ref|ZP_07962600.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella salivae DSM
15606]
gi|315664254|gb|EFV03954.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella salivae DSM
15606]
Length = 247
Score = 295 bits (755), Expect = 4e-78, Method: Composition-based stats.
Identities = 101/242 (41%), Positives = 154/242 (63%), Gaps = 2/242 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M AS+ + P HI IIMDGNGRWAA RG PR GH+ G++ I + A +G+K LT+
Sbjct: 1 MEASLDRTRIPKHIAIIMDGNGRWAAERGKPRSYGHQAGVDAVRRITSEATRLGVKFLTL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW RP EIS L+ L+ + L+ KNN++ RVIG+R L ++ L+E
Sbjct: 61 YTFSTENWNRPADEISALMGLVLTSLEDEI--FMKNNVRFRVIGDRKRLPAEVEQKLRET 118
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E+ T+ N+ + + +A +YS+R E+++A++ + + + S+ ++ +I+++L TS +P
Sbjct: 119 EEHTKTNSAMTMVVALSYSARWEMAQAMRELLTEHKDKSLAPEEITEEIISRHLQTSFMP 178
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DP+L+IRTGGE R+S+FLLWQ+AYSE F YWPDF+ + A+ Y R RRFG
Sbjct: 179 DPELLIRTGGELRISNFLLWQIAYSELYFCDTYWPDFNEDDLHKAILSYQNRQRRFGKTE 238
Query: 241 KK 242
+
Sbjct: 239 AQ 240
>gi|332098764|gb|EGJ03724.1| di-trans,poly-cis-decaprenylcistransferase [Shigella boydii
3594-74]
Length = 252
Score = 295 bits (755), Expect = 4e-78, Method: Composition-based stats.
Identities = 92/239 (38%), Positives = 143/239 (59%), Gaps = 4/239 (1%)
Query: 6 MSSSPP----DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+S P H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++
Sbjct: 8 LSEKLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY 67
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+S L++L L SL ++N+++R+IG+ + + ++++E
Sbjct: 68 AFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQECIRKSE 127
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T NTGL L IA NY R +I + ++ + + ++ G++ +D ++ +++ ++
Sbjct: 128 ALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAP 187
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRTGGE R+S+FLLWQ+AY+E FI WPDF + F ALN + R+RRFGG
Sbjct: 188 VDLVIRTGGEHRISNFLLWQIAYAELYFIDVLWPDFDEQDFEGALNAFANRERRFGGTE 246
>gi|148270515|ref|YP_001244975.1| undecaprenyl pyrophosphate synthase [Thermotoga petrophila RKU-1]
gi|147736059|gb|ABQ47399.1| Undecaprenyl pyrophosphate synthetase [Thermotoga petrophila RKU-1]
Length = 233
Score = 295 bits (755), Expect = 4e-78, Method: Composition-based stats.
Identities = 103/231 (44%), Positives = 144/231 (62%), Gaps = 2/231 (0%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ IIMDGNGRWA RGLPR GH++G +V + V + E+GIK LT F+FS NW
Sbjct: 2 RIPQHVAIIMDGNGRWAKKRGLPRIKGHQRGAKVLHNTVKWSLEMGIKYLTAFSFSTENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP E+ L+ L + + L+K ++VR++G + L + +L +E E++T+
Sbjct: 62 KRPKEEVEFLMDLFVQMIDREMELLRKERVRVRILGRKEGLSEKVLKKWQEVEEKTKEFD 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+ L IAFNY R EI A+++I +D+ G ++ +YL DVPDPDLIIRT
Sbjct: 122 RMTLVIAFNYGGRREILDAVESILKDVSQGKKI--ELTEETFRQYLYLPDVPDPDLIIRT 179
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE RLS+FLLWQ AYSE F + WPDF++ F A+ Y+ R+RRFGGL
Sbjct: 180 SGEMRLSNFLLWQSAYSELYFFKKPWPDFTKRDFLRAIESYSKRERRFGGL 230
>gi|194333245|ref|YP_002015105.1| undecaprenyl diphosphate synthase [Prosthecochloris aestuarii DSM
271]
gi|194311063|gb|ACF45458.1| undecaprenyl diphosphate synthase [Prosthecochloris aestuarii DSM
271]
Length = 272
Score = 295 bits (755), Expect = 4e-78, Method: Composition-based stats.
Identities = 102/233 (43%), Positives = 144/233 (61%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI +IMDGNGRWA G R GH G+E +IV A A++ I LT+F FS NW+
Sbjct: 33 LPRHIAVIMDGNGRWAKENGKSRIEGHIAGVESVRDIVEACAQLQIAYLTLFTFSTENWK 92
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP EIS L++L+ L+K L +NNI++ VIGN L + + L E T NTG
Sbjct: 93 RPEKEISALMQLLIKVLRKEAIKLHENNIRLHVIGNIERLPEKVQQTLNETIALTAKNTG 152
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L IA +YS + +I +A + I ++ +G++ ++ LI YL T +PDP+L+IRT
Sbjct: 153 LTLSIALSYSGKWDILQACRKIAEEAAAGALDPKKINEQLIESYLSTRAIPDPELLIRTS 212
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE R+S+FLLWQ AYSE F YWP+F R+ + A+ ++ R+RRFG S++
Sbjct: 213 GELRISNFLLWQSAYSEIFFTRTYWPEFRRKQLYEAIRDFSARERRFGLTSEQ 265
>gi|229524259|ref|ZP_04413664.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae bv. albensis
VL426]
gi|229337840|gb|EEO02857.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae bv. albensis
VL426]
Length = 250
Score = 295 bits (755), Expect = 4e-78, Method: Composition-based stats.
Identities = 92/239 (38%), Positives = 147/239 (61%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S+ P HI +IMDGNGRWA A+G PR GH+ G+ + ++ +A +GIK +T+FAF
Sbjct: 5 SLSQDVLPKHIAVIMDGNGRWAKAQGKPRVFGHKNGVAAVRKNISTSARLGIKAVTLFAF 64
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRRP E+ L++L + L L KNN+++RVIG++ + + + +AE
Sbjct: 65 SSENWRRPEEEVGVLMELFMTVLSTEIKKLHKNNLRLRVIGDKSRFSERLQTKIAQAEQL 124
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NTG+ + IA NY + +I +A + + + + G + D+D ++ ++L +D+PD D
Sbjct: 125 TASNTGMVVNIAANYGGQWDILQATQALAEKVTQGELQPSDIDEAVFKQHLTMADLPDVD 184
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRT GE R+S+F+LWQ+AY+E F P +WP+F A+ + R+RRFG ++
Sbjct: 185 LLIRTSGECRISNFMLWQLAYAEMYFTPVFWPEFDENCLIEAVTWFVNRERRFGCTGEQ 243
>gi|323964933|gb|EGB60399.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli M863]
Length = 253
Score = 295 bits (755), Expect = 4e-78, Method: Composition-based stats.
Identities = 91/239 (38%), Positives = 142/239 (59%), Gaps = 4/239 (1%)
Query: 6 MSSSPP----DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+S P H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++
Sbjct: 9 LSEKLPVHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY 68
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+S L++L L SL ++N+++R+IG+ + + ++++E
Sbjct: 69 AFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSE 128
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T NTGL L IA NY R +I + ++ + + ++ G++ +D ++ +++ ++
Sbjct: 129 ALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAP 188
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRTGGE R+S+FLLWQ+AY+E F WPDF + F ALN + R+RRFGG
Sbjct: 189 VDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGGTE 247
>gi|110804226|ref|YP_687746.1| undecaprenyl pyrophosphate synthase [Shigella flexneri 5 str. 8401]
gi|157155987|ref|YP_001461343.1| undecaprenyl pyrophosphate synthase [Escherichia coli E24377A]
gi|157159639|ref|YP_001456957.1| undecaprenyl pyrophosphate synthase [Escherichia coli HS]
gi|195938144|ref|ZP_03083526.1| undecaprenyl pyrophosphate synthase [Escherichia coli O157:H7 str.
EC4024]
gi|209917364|ref|YP_002291448.1| undecaprenyl pyrophosphate synthase [Escherichia coli SE11]
gi|253774799|ref|YP_003037630.1| undecaprenyl pyrophosphate synthase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|256021606|ref|ZP_05435471.1| undecaprenyl pyrophosphate synthase [Shigella sp. D9]
gi|256025486|ref|ZP_05439351.1| undecaprenyl pyrophosphate synthase [Escherichia sp. 4_1_40B]
gi|261226928|ref|ZP_05941209.1| undecaprenyl diphosphate synthase [Escherichia coli O157:H7 str.
FRIK2000]
gi|261255332|ref|ZP_05947865.1| undecaprenyl diphosphate synthase [Escherichia coli O157:H7 str.
FRIK966]
gi|293408266|ref|ZP_06652106.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli B354]
gi|293476831|ref|ZP_06665239.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli B088]
gi|297518954|ref|ZP_06937340.1| undecaprenyl pyrophosphate synthase [Escherichia coli OP50]
gi|300816214|ref|ZP_07096437.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
107-1]
gi|300901993|ref|ZP_07120020.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
84-1]
gi|300932128|ref|ZP_07147413.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
187-1]
gi|300938581|ref|ZP_07153314.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
21-1]
gi|300956057|ref|ZP_07168382.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
175-1]
gi|301305310|ref|ZP_07211406.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
124-1]
gi|301646497|ref|ZP_07246372.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
146-1]
gi|306815226|ref|ZP_07449375.1| undecaprenyl pyrophosphate synthase [Escherichia coli NC101]
gi|307136774|ref|ZP_07496130.1| undecaprenyl pyrophosphate synthase [Escherichia coli H736]
gi|307311379|ref|ZP_07591021.1| undecaprenyl diphosphate synthase [Escherichia coli W]
gi|309787152|ref|ZP_07681764.1| di-trans,poly-cis-decaprenylcistransferase [Shigella dysenteriae
1617]
gi|309796351|ref|ZP_07690760.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
145-7]
gi|1552751|gb|AAB08603.1| hypothetical protein [Escherichia coli]
gi|110613774|gb|ABF02441.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|157065319|gb|ABV04574.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli HS]
gi|157078017|gb|ABV17725.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
E24377A]
gi|209910623|dbj|BAG75697.1| undecaprenyl pyrophosphate synthase [Escherichia coli SE11]
gi|253325843|gb|ACT30445.1| undecaprenyl diphosphate synthase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|260450622|gb|ACX41044.1| undecaprenyl diphosphate synthase [Escherichia coli DH1]
gi|291321284|gb|EFE60726.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli B088]
gi|291472517|gb|EFF14999.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli B354]
gi|294493737|gb|ADE92493.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
IHE3034]
gi|300317087|gb|EFJ66871.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
175-1]
gi|300405879|gb|EFJ89417.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
84-1]
gi|300456463|gb|EFK19956.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
21-1]
gi|300460104|gb|EFK23597.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
187-1]
gi|300531421|gb|EFK52483.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
107-1]
gi|300839415|gb|EFK67175.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
124-1]
gi|301075283|gb|EFK90089.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
146-1]
gi|305850888|gb|EFM51343.1| undecaprenyl pyrophosphate synthase [Escherichia coli NC101]
gi|306908358|gb|EFN38856.1| undecaprenyl diphosphate synthase [Escherichia coli W]
gi|307629750|gb|ADN74054.1| undecaprenyl pyrophosphate synthase [Escherichia coli UM146]
gi|308120055|gb|EFO57317.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
145-7]
gi|308924730|gb|EFP70225.1| di-trans,poly-cis-decaprenylcistransferase [Shigella dysenteriae
1617]
gi|312944782|gb|ADR25609.1| undecaprenyl pyrophosphate synthase [Escherichia coli O83:H1 str.
NRG 857C]
gi|315059392|gb|ADT73719.1| undecaprenyl pyrophosphate synthase [Escherichia coli W]
gi|315254976|gb|EFU34944.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
85-1]
gi|320639980|gb|EFX09565.1| undecaprenyl pyrophosphate synthase [Escherichia coli O157:H7 str.
G5101]
gi|320644750|gb|EFX13794.1| undecaprenyl pyrophosphate synthase [Escherichia coli O157:H- str.
493-89]
gi|320652906|gb|EFX21144.1| undecaprenyl pyrophosphate synthase [Escherichia coli O157:H- str.
H 2687]
gi|320658294|gb|EFX26023.1| undecaprenyl pyrophosphate synthase [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320663604|gb|EFX30888.1| undecaprenyl pyrophosphate synthase [Escherichia coli O55:H7 str.
USDA 5905]
gi|320668917|gb|EFX35712.1| undecaprenyl pyrophosphate synthase [Escherichia coli O157:H7 str.
LSU-61]
gi|323160207|gb|EFZ46166.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
E128010]
gi|323170965|gb|EFZ56614.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli LT-68]
gi|323181681|gb|EFZ67095.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli 1357]
gi|323190426|gb|EFZ75701.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
RN587/1]
gi|323380049|gb|ADX52317.1| undecaprenyl diphosphate synthase [Escherichia coli KO11]
gi|324017819|gb|EGB87038.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
117-3]
gi|332095112|gb|EGJ00144.1| di-trans,poly-cis-decaprenylcistransferase [Shigella boydii
5216-82]
gi|332341507|gb|AEE54841.1| undecaprenyl pyrophosphate synthase YaeS [Escherichia coli UMNK88]
gi|332762047|gb|EGJ92318.1| di-trans,poly-cis-decaprenylcistransferase [Shigella flexneri
2747-71]
gi|332762177|gb|EGJ92446.1| di-trans,poly-cis-decaprenylcistransferase [Shigella flexneri
4343-70]
gi|332765021|gb|EGJ95249.1| di-trans,poly-cis-decaprenylcistransferase [Shigella flexneri
K-671]
gi|332768676|gb|EGJ98856.1| di-trans,poly-cis-decaprenylcistransferase [Shigella flexneri
2930-71]
gi|333009097|gb|EGK28553.1| di-trans,poly-cis-decaprenylcistransferase [Shigella flexneri
K-218]
gi|333010668|gb|EGK30101.1| di-trans,poly-cis-decaprenylcistransferase [Shigella flexneri VA-6]
gi|333011012|gb|EGK30431.1| di-trans,poly-cis-decaprenylcistransferase [Shigella flexneri
K-272]
gi|333021807|gb|EGK41056.1| di-trans,poly-cis-decaprenylcistransferase [Shigella flexneri
K-227]
gi|333022225|gb|EGK41464.1| di-trans,poly-cis-decaprenylcistransferase [Shigella flexneri
K-304]
Length = 252
Score = 295 bits (755), Expect = 4e-78, Method: Composition-based stats.
Identities = 91/239 (38%), Positives = 142/239 (59%), Gaps = 4/239 (1%)
Query: 6 MSSSPP----DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+S P H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++
Sbjct: 8 LSEKLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY 67
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+S L++L L SL ++N+++R+IG+ + + ++++E
Sbjct: 68 AFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSE 127
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T NTGL L IA NY R +I + ++ + + ++ G++ +D ++ +++ ++
Sbjct: 128 ALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAP 187
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRTGGE R+S+FLLWQ+AY+E F WPDF + F ALN + R+RRFGG
Sbjct: 188 VDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGGTE 246
>gi|319401450|gb|EFV89660.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis FRI909]
Length = 256
Score = 295 bits (755), Expect = 4e-78, Method: Composition-based stats.
Identities = 101/239 (42%), Positives = 150/239 (62%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P+H+ IIMDGNGRWA R +PR GH +G++ +I A+++GIK LT++AF
Sbjct: 18 ELDIHNIPEHVAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITREASDLGIKYLTLYAF 77
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP SE++ ++ L +FLK L + N+K+ IG L + + A+ +
Sbjct: 78 STENWSRPESEVNYIMNLPVNFLKTFLPELIEKNVKIETIGFYEGLPQSTINAIDFAKAK 137
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NTGL L A NY R EI +++K I+ +++ S +D +LI ++L T PDPD
Sbjct: 138 TQQNTGLTLVFAINYGGRAEIIQSMKTIYNELQLNGQGSEVIDEALIKRHLMTHSYPDPD 197
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRT GE+R+S+FL+WQV+YSEF+F + WPDF + L Y R RRFGGLS++
Sbjct: 198 LLIRTSGEQRISNFLIWQVSYSEFIFNEKLWPDFDEKELRECLKIYQSRQRRFGGLSEE 256
>gi|227529100|ref|ZP_03959149.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus vaginalis
ATCC 49540]
gi|227350944|gb|EEJ41235.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus vaginalis
ATCC 49540]
Length = 261
Score = 295 bits (755), Expect = 4e-78, Method: Composition-based stats.
Identities = 98/241 (40%), Positives = 148/241 (61%), Gaps = 3/241 (1%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + + P+HI IIMDGNGRWA R LPR AGH++G++ + AA+++G+K L+++A
Sbjct: 19 AKLDPNRIPNHIAIIMDGNGRWAQKRHLPRVAGHKQGMQTVKNVTIAASKLGVKVLSLYA 78
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW+RP SE++ L++L F L K+N++V V+G+ L + +A
Sbjct: 79 FSTENWKRPSSEVNYLMQLPIKFFSTFVPELVKHNVRVMVMGDITKLPQGTQKAVNDAIA 138
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD---V 179
T G+ L A NY SRDEI RA + I + + + + +D L+++ + T+D +
Sbjct: 139 DTAECDGMILNFALNYGSRDEIIRATQQIAKKVAAKEISIDQIDEQLLSQNMMTADLGEL 198
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRT GE+R+S+F+LWQ+AYSE F YWPDF R A+ ++ R RR+GGL
Sbjct: 199 ADPDLLIRTSGEERISNFMLWQIAYSELEFTDVYWPDFDRHSLEDAIVKFQGRHRRYGGL 258
Query: 240 S 240
Sbjct: 259 K 259
>gi|227544957|ref|ZP_03975006.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus reuteri
CF48-3A]
gi|300910012|ref|ZP_07127472.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus reuteri
SD2112]
gi|227185068|gb|EEI65139.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus reuteri
CF48-3A]
gi|300892660|gb|EFK86020.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus reuteri
SD2112]
Length = 259
Score = 295 bits (755), Expect = 4e-78, Method: Composition-based stats.
Identities = 108/242 (44%), Positives = 157/242 (64%), Gaps = 3/242 (1%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P+HI IIMDGNGRWA R LPR AGH++G++ +I AA+E+G+K L+++AF
Sbjct: 18 QLDMERIPNHIAIIMDGNGRWAQKRHLPRVAGHKQGMQTVKKITIAASELGVKVLSLYAF 77
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP SE+S L++L F L K+N+KV V+G+ L + +K+A
Sbjct: 78 STENWKRPSSEVSYLMQLPVRFFSTFVPDLVKHNVKVTVMGDITQLPEATQKAVKDAMAD 137
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV---P 180
T TG+ L A NY SRDEI++A K I +D+++G++ D+D + KYL ++ +
Sbjct: 138 TAHCTGMILNFALNYGSRDEITQAAKEIAEDVQNGNLALADIDEASFGKYLMSAQLGQFA 197
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GE+R+S+F+LWQ+AYSE F+PE+WPDF + A+ Y R RRFGGL
Sbjct: 198 DPDLLIRTSGEERISNFMLWQIAYSELEFVPEHWPDFDEDSLRSAIIAYQGRHRRFGGLK 257
Query: 241 KK 242
+
Sbjct: 258 NQ 259
>gi|313893425|ref|ZP_07826997.1| di-trans,poly-cis-decaprenylcistransferase [Veillonella sp. oral
taxon 158 str. F0412]
gi|313442066|gb|EFR60486.1| di-trans,poly-cis-decaprenylcistransferase [Veillonella sp. oral
taxon 158 str. F0412]
Length = 254
Score = 295 bits (755), Expect = 4e-78, Method: Composition-based stats.
Identities = 101/239 (42%), Positives = 158/239 (66%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ S++ P H+ IIMDGNGRWA RG+PR GHR G +V +IV AA ++GI+ LT++ F
Sbjct: 15 AIDSNAIPKHVAIIMDGNGRWAKRRGMPRSMGHRAGADVLKQIVIAADDIGIRALTVYGF 74
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP E+S L+ LIK +L + ++N+++R IG +L +++ ++++AE
Sbjct: 75 STENWKRPEQEVSLLMALIKEYLNNNVKYMHEHNVRIRFIGYIGALSEELQQIIRDAELL 134
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NTGL L +A NY RDEI R I++I +++G++ + D+ ++ L T + D D
Sbjct: 135 TQNNTGLTLQLAINYGGRDEIVRTIRDITSSVKAGTITTDDITEDYVSSQLFTKEFSDVD 194
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IR + R+S+FLLWQ+AY+EF F +WPDF++E A+ Y R+RRFGGL +
Sbjct: 195 LLIRPSSDFRISNFLLWQLAYAEFWFTDLHWPDFTKETLLEAVAAYQKRERRFGGLRDE 253
>gi|281425930|ref|ZP_06256843.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella oris F0302]
gi|281399823|gb|EFB30654.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella oris F0302]
Length = 247
Score = 294 bits (754), Expect = 5e-78, Method: Composition-based stats.
Identities = 101/242 (41%), Positives = 150/242 (61%), Gaps = 2/242 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M AS+ + P HI IIMDGNGRWA+ +G PR GH+ G++ I + A +G+K LT+
Sbjct: 1 MTASLDMTRIPKHIAIIMDGNGRWASEKGKPRSYGHQAGVDAVRRITSEATRLGVKFLTL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW RP EIS L+ L+ + L+ KNN++ RVIG+R L ++ L+E
Sbjct: 61 YTFSTENWNRPADEISALMGLVLTSLEDEI--FMKNNVRFRVIGDRKRLPAEVEQKLRET 118
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E+ T+ NT + + +A +YS+R EI +A++NI + + D+ +I +L+T+ +P
Sbjct: 119 EEHTKGNTAMTMVVALSYSARWEIVQAMRNILIENTDKPLQPTDITEEMIGHHLETNFMP 178
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DP+L+IRTGGE R+S++LLWQ+AYSE F YWPDF + A+ Y R RRFG
Sbjct: 179 DPELLIRTGGELRISNYLLWQIAYSELYFCDTYWPDFCEDDLQKAIQSYQNRQRRFGKTE 238
Query: 241 KK 242
+
Sbjct: 239 AQ 240
>gi|320173345|gb|EFW48548.1| Undecaprenyl pyrophosphate synthetase [Shigella dysenteriae CDC
74-1112]
Length = 253
Score = 294 bits (754), Expect = 5e-78, Method: Composition-based stats.
Identities = 90/239 (37%), Positives = 142/239 (59%), Gaps = 4/239 (1%)
Query: 6 MSSSPP----DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+S P H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++
Sbjct: 9 LSEKLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY 68
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+S L++L L SL ++N+++R+IG+ + + ++++E
Sbjct: 69 AFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQECIRKSE 128
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T NTGL L IA +Y R +I + ++ + + ++ G++ +D ++ +++ ++
Sbjct: 129 ALTAGNTGLTLNIAASYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAP 188
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRTGGE R+S+FLLWQ+AY+E F WPDF + F ALN + R+RRFGG
Sbjct: 189 VDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGGTE 247
>gi|325268402|ref|ZP_08135034.1| undecaprenyl diphosphate synthase [Prevotella multiformis DSM
16608]
gi|324989256|gb|EGC21207.1| undecaprenyl diphosphate synthase [Prevotella multiformis DSM
16608]
Length = 250
Score = 294 bits (754), Expect = 5e-78, Method: Composition-based stats.
Identities = 98/245 (40%), Positives = 145/245 (59%), Gaps = 5/245 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
MV + + P HI IIMDGNGRWA R PR GH+ G+E I + +G+K LT+
Sbjct: 1 MVEELDMTRIPRHIAIIMDGNGRWATERNKPRSYGHQAGVETVRRITSECVRLGVKYLTL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW RP EI+ L+ L+ + L+ KNN++ RVIG+R L +++ L+E
Sbjct: 61 YTFSTENWNRPTDEIAALMGLVLTSLEDEI--FMKNNVRFRVIGDRERLPEEVQEKLRET 118
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSV---CSHDVDSSLIAKYLDTS 177
E T N + + +A +YS+R EI++A+K I + + + + L+ +++ T+
Sbjct: 119 EQHTEKNAAMTMVVALSYSARWEITQAMKEIVTEHQQENTVPLRPEMITEELLDRHMQTN 178
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+PDPDL+IRTGGE R+S++LLWQ+AYSE F YWPDFS A+ + R RRFG
Sbjct: 179 FMPDPDLLIRTGGELRISNYLLWQIAYSELYFCDTYWPDFSEHDLQKAITSFQSRQRRFG 238
Query: 238 GLSKK 242
K+
Sbjct: 239 KTEKQ 243
>gi|82542773|ref|YP_406720.1| undecaprenyl pyrophosphate synthase [Shigella boydii Sb227]
gi|81244184|gb|ABB64892.1| conserved hypothetical protein [Shigella boydii Sb227]
Length = 253
Score = 294 bits (754), Expect = 5e-78, Method: Composition-based stats.
Identities = 92/239 (38%), Positives = 143/239 (59%), Gaps = 4/239 (1%)
Query: 6 MSSSPP----DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+S P H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++
Sbjct: 9 LSEKLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY 68
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+S L++L L SL ++N+++R+IG+ + + ++++E
Sbjct: 69 AFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQECIRKSE 128
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T NTGL L IA NY R +I + ++ + + ++ G++ +D ++ +++ ++
Sbjct: 129 ALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAP 188
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRTGGE R+S+FLLWQ+AY+E FI WPDF + F ALN + R+RRFGG
Sbjct: 189 VDLVIRTGGEHRISNFLLWQIAYAELYFIDVLWPDFDEQDFEGALNAFANRERRFGGTE 247
>gi|75907137|ref|YP_321433.1| undecaprenyl pyrophosphate synthase [Anabaena variabilis ATCC
29413]
gi|92090650|sp|Q9ZEJ7|UPPS_ANAVT RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|75700862|gb|ABA20538.1| Undecaprenyl pyrophosphate synthetase [Anabaena variabilis ATCC
29413]
Length = 249
Score = 294 bits (754), Expect = 5e-78, Method: Composition-based stats.
Identities = 87/235 (37%), Positives = 139/235 (59%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P H+ +IMDGNGRWA +GLPR GH++G++ +++ + GI+ LT +AFS
Sbjct: 15 LKRELLPKHVAVIMDGNGRWAKRQGLPRIMGHKRGVDALKDLLRCCRDWGIQALTAYAFS 74
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+ L+ L + L++ + + N++++ +GN +L + + + + T
Sbjct: 75 TENWKRPQEEVEFLMTLFQRVLRQELREMVEENVQIQFVGNLAALPRSLQAEISRSMEAT 134
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ N G+ +A NY R EI +A + I Q ++ G + ++D + ++L T+ + DPDL
Sbjct: 135 KNNRGIRFSVATNYGGRQEILQACRAIAQKVQQGLLQPDEIDEEVFERHLYTAGIADPDL 194
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE RLS+FLLWQ+AY E WPDF R F AL Y R+RRFG +
Sbjct: 195 LIRTSGEMRLSNFLLWQMAYGEIYITDTLWPDFDRTEFHRALCAYQQRERRFGKV 249
>gi|81428871|ref|YP_395871.1| di-trans-poly-cis-decaprenylcistransferase (undecaprenyl
diphosphate synthetase) [Lactobacillus sakei subsp.
sakei 23K]
gi|78610513|emb|CAI55564.1| Di-trans-poly-cis-decaprenylcistransferase (undecaprenyl
diphosphate synthetase) [Lactobacillus sakei subsp.
sakei 23K]
Length = 251
Score = 294 bits (754), Expect = 5e-78, Method: Composition-based stats.
Identities = 105/240 (43%), Positives = 154/240 (64%), Gaps = 3/240 (1%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P+HI IIMDGNGRWA R +PR AGH+ G+E I AA+ +G+K LT++AF
Sbjct: 12 QLDPENIPNHIAIIMDGNGRWANKRLMPRVAGHKAGMENVKTITKAASRMGVKVLTLYAF 71
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP E++ L++L F L + N++V+V+GN L + ++A
Sbjct: 72 STENWKRPSDEVNFLMQLPVDFFGTFMPELIEENVRVKVMGNIHDLPEKTQKAAQDAMAD 131
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT---SDVP 180
T NTG+ L A NY RDEI +A++ I +D SG++ + +D LI++YL T +
Sbjct: 132 TAQNTGMILNFALNYGGRDEIQQAVQQIAKDAVSGTIEADSIDDDLISQYLMTGFLGEYA 191
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DP+L+IRT GE+R+S+FLLWQ+AYSE VF+ E+WPDF+ ++F ++ Y R RRFGGL
Sbjct: 192 DPELLIRTSGEERISNFLLWQIAYSELVFVDEFWPDFTPQVFEKSIFTYQQRHRRFGGLK 251
>gi|322390832|ref|ZP_08064342.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
parasanguinis ATCC 903]
gi|321142502|gb|EFX37970.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
parasanguinis ATCC 903]
Length = 249
Score = 294 bits (754), Expect = 5e-78, Method: Composition-based stats.
Identities = 106/234 (45%), Positives = 139/234 (59%), Gaps = 4/234 (1%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HIGIIMDGNGRWA R PR GH+ G+E E+ AA +G++ LT++AFS NW
Sbjct: 16 VPKHIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQEVTIAAKNMGVQVLTVYAFSTENWT 75
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ ++ L F + L +NN+K+++IG+ L + L L+ AE T LNTG
Sbjct: 76 RPEDEVKFIMHLPVEFYDRFVPELHRNNVKIQMIGDTKKLPKETLEALERAEAMTHLNTG 135
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLI 185
L L A NY R EI++A+K I Q++ D+ +IA L T +P DPDLI
Sbjct: 136 LILNFALNYGGRAEITQAVKQIAQEVLDAKFSPEDITEEMIADSLYTESLPRVLRDPDLI 195
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRT GE RLS+FL WQ AYSE F WPDF E A+ +Y+ R RRFGG+
Sbjct: 196 IRTSGEIRLSNFLPWQAAYSELYFTDVMWPDFGEEALRSAIVEYSHRHRRFGGV 249
>gi|229549340|ref|ZP_04438065.1| Di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
ATCC 29200]
gi|255972049|ref|ZP_05422635.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis T1]
gi|255975106|ref|ZP_05425692.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis T2]
gi|256956760|ref|ZP_05560931.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis DS5]
gi|256963657|ref|ZP_05567828.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis
HIP11704]
gi|257079715|ref|ZP_05574076.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis JH1]
gi|257087520|ref|ZP_05581881.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis D6]
gi|257416728|ref|ZP_05593722.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis
AR01/DG]
gi|257421877|ref|ZP_05598867.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis X98]
gi|294779074|ref|ZP_06744486.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
PC1.1]
gi|300860444|ref|ZP_07106531.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TUSoD Ef11]
gi|307270753|ref|ZP_07552043.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX4248]
gi|307271599|ref|ZP_07552871.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0855]
gi|307285655|ref|ZP_07565792.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0860]
gi|307287639|ref|ZP_07567682.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0109]
gi|312899912|ref|ZP_07759230.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0470]
gi|312953568|ref|ZP_07772405.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0102]
gi|229305577|gb|EEN71573.1| Di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
ATCC 29200]
gi|255963067|gb|EET95543.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis T1]
gi|255967978|gb|EET98600.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis T2]
gi|256947256|gb|EEU63888.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis DS5]
gi|256954153|gb|EEU70785.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis
HIP11704]
gi|256987745|gb|EEU75047.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis JH1]
gi|256995550|gb|EEU82852.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis D6]
gi|257158556|gb|EEU88516.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis
ARO1/DG]
gi|257163701|gb|EEU93661.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis X98]
gi|294453854|gb|EFG22244.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
PC1.1]
gi|300849483|gb|EFK77233.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TUSoD Ef11]
gi|306501377|gb|EFM70680.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0109]
gi|306502623|gb|EFM71889.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0860]
gi|306511871|gb|EFM80869.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0855]
gi|306512867|gb|EFM81509.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX4248]
gi|310628406|gb|EFQ11689.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0102]
gi|311292908|gb|EFQ71464.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0470]
gi|315025323|gb|EFT37255.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX2137]
gi|315032668|gb|EFT44600.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0017]
gi|315035931|gb|EFT47863.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0027]
gi|315144822|gb|EFT88838.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX2141]
gi|315148511|gb|EFT92527.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX4244]
gi|315150079|gb|EFT94095.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0012]
gi|315151980|gb|EFT95996.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0031]
gi|315155417|gb|EFT99433.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0043]
gi|315159285|gb|EFU03302.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0312]
gi|315165035|gb|EFU09052.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX1302]
gi|323481474|gb|ADX80913.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
62]
gi|327535768|gb|AEA94602.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
OG1RF]
gi|329572594|gb|EGG54235.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX1467]
Length = 271
Score = 294 bits (754), Expect = 5e-78, Method: Composition-based stats.
Identities = 100/240 (41%), Positives = 144/240 (60%), Gaps = 4/240 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
P HI IIMDGNGRWA R LPR AGH++G++ +I A+ +G+K LT++AFS
Sbjct: 22 KEGQIPQHIAIIMDGNGRWAQNRRLPRIAGHKEGMDTVKKITKHASHLGVKVLTLYAFST 81
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP E++ L++L F L K N+KV V+G + L +K A +QT+
Sbjct: 82 ENWKRPTDEVNFLMQLPVDFFDTFVPELIKENVKVNVMGYQEFLPSHTQDAVKRAIEQTK 141
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----D 181
NTG+ L A NY +R E+ A+K I ++ + + ++ IA +L T +P D
Sbjct: 142 DNTGMVLNFALNYGARAELLTAMKQIAAEVSEKTYTADEITEETIADHLMTGFLPTELRD 201
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
P+L+IRT GE+R+S+FLLWQ+AYSE F WPDFS + A+ + R+RRFGGL +
Sbjct: 202 PELLIRTSGEERISNFLLWQIAYSELFFTKALWPDFSGDTLETAIASFQNRNRRFGGLKE 261
>gi|86607493|ref|YP_476256.1| undecaprenyl diphosphate synthase [Synechococcus sp. JA-3-3Ab]
gi|86556035|gb|ABD00993.1| undecaprenyl diphosphate synthase [Synechococcus sp. JA-3-3Ab]
Length = 248
Score = 294 bits (754), Expect = 5e-78, Method: Composition-based stats.
Identities = 89/238 (37%), Positives = 137/238 (57%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ A + P H+ ++MDGNGRWA RGLPR GH++G+ E++ + GI LT
Sbjct: 11 LPADLDPQLLPRHVAVVMDGNGRWAQKRGLPRSVGHQRGVAALKELLRCCHDWGIPLLTA 70
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW R E+ L+ L + L + + + ++++ G +L + + A
Sbjct: 71 YAFSTENWGRAREEVDFLMTLFEQVLWQELAEMVQQGVRIQFAGQLSALPRSLQDTILHA 130
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
++T+ N G+ L +A NY R EI +A ++I ++ G + +D +L +++L T+ +
Sbjct: 131 VERTQHNEGICLTVALNYGGRQEIVQACRSIATLVQQGLLQPDQIDEALFSQFLYTTGLS 190
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DPDL+IRT GE R+S+FLLWQ+AY+E F P WPDF R F AL Y R RRFG
Sbjct: 191 DPDLLIRTSGEMRISNFLLWQMAYTEQYFTPILWPDFDRAAFHQALLSYQSRQRRFGR 248
>gi|254421690|ref|ZP_05035408.1| undecaprenyl diphosphate synthase [Synechococcus sp. PCC 7335]
gi|196189179|gb|EDX84143.1| undecaprenyl diphosphate synthase [Synechococcus sp. PCC 7335]
Length = 261
Score = 294 bits (754), Expect = 5e-78, Method: Composition-based stats.
Identities = 103/241 (42%), Positives = 148/241 (61%), Gaps = 1/241 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P H+ +IMDGNGRWA R LPR AGHR+G V +++ + GI+ LT
Sbjct: 7 LPDDINPLCVPKHVAVIMDGNGRWANQRCLPRVAGHRQGARVLKDLLRCCKDWGIEALTA 66
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP +E+ L+ L + LKK ++ + ++VR IG+ +L + + A
Sbjct: 67 YAFSTENWKRPTTEVDFLMVLFEKMLKKELMAMHQEGVRVRFIGDLSALPPILQKEMNLA 126
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
++T NT ++ +A NY SR EI+ A + I Q +E G+V + +V +IA++L T
Sbjct: 127 VEETANNTAIDFNVAVNYGSRSEITMACQQIAQKVEQGAVTACEVTEDMIAEHLYTQGS- 185
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GE+RLS+FLLWQ+AY+E VF +WPDF R F AL Y RDRRFG S
Sbjct: 186 DPDLLIRTSGEQRLSNFLLWQLAYTEMVFTDAFWPDFDRAQFHRALLIYQRRDRRFGNAS 245
Query: 241 K 241
Sbjct: 246 D 246
>gi|15799856|ref|NP_285868.1| undecaprenyl pyrophosphate synthase [Escherichia coli O157:H7
EDL933]
gi|15829430|ref|NP_308203.1| undecaprenyl pyrophosphate synthase [Escherichia coli O157:H7 str.
Sakai]
gi|16128167|ref|NP_414716.1| undecaprenyl pyrophosphate synthase [Escherichia coli str. K-12
substr. MG1655]
gi|24111609|ref|NP_706119.1| undecaprenyl pyrophosphate synthase [Shigella flexneri 2a str. 301]
gi|26246120|ref|NP_752159.1| undecaprenyl pyrophosphate synthase [Escherichia coli CFT073]
gi|30061731|ref|NP_835902.1| undecaprenyl pyrophosphate synthase [Shigella flexneri 2a str.
2457T]
gi|82775564|ref|YP_401911.1| undecaprenyl pyrophosphate synthase [Shigella dysenteriae Sd197]
gi|89107054|ref|AP_000834.1| undecaprenyl pyrophosphate synthase [Escherichia coli str. K-12
substr. W3110]
gi|91209244|ref|YP_539230.1| undecaprenyl pyrophosphate synthase [Escherichia coli UTI89]
gi|110640393|ref|YP_668121.1| undecaprenyl pyrophosphate synthase [Escherichia coli 536]
gi|117622459|ref|YP_851372.1| undecaprenyl pyrophosphate synthase [Escherichia coli APEC O1]
gi|170021473|ref|YP_001726427.1| undecaprenyl pyrophosphate synthase [Escherichia coli ATCC 8739]
gi|170079810|ref|YP_001729130.1| undecaprenyl pyrophosphate synthase [Escherichia coli str. K-12
substr. DH10B]
gi|170681254|ref|YP_001742302.1| undecaprenyl pyrophosphate synthase [Escherichia coli SMS-3-5]
gi|187776344|ref|ZP_02802018.2| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC4196]
gi|188025157|ref|ZP_02776415.2| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC4113]
gi|189010417|ref|ZP_02807073.2| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC4076]
gi|189402191|ref|ZP_02780794.2| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC4401]
gi|189403434|ref|ZP_02795359.2| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC4486]
gi|189405251|ref|ZP_02814290.2| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC869]
gi|189406338|ref|ZP_02827988.2| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC508]
gi|191166374|ref|ZP_03028206.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli B7A]
gi|191172816|ref|ZP_03034353.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli F11]
gi|193063261|ref|ZP_03044352.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli E22]
gi|193067631|ref|ZP_03048598.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
E110019]
gi|194428326|ref|ZP_03060868.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli B171]
gi|194439120|ref|ZP_03071202.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli 101-1]
gi|208807554|ref|ZP_03249891.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC4206]
gi|208812136|ref|ZP_03253465.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC4045]
gi|208818308|ref|ZP_03258628.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC4042]
gi|209396854|ref|YP_002268782.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC4115]
gi|215485335|ref|YP_002327766.1| undecaprenyl pyrophosphate synthase [Escherichia coli O127:H6 str.
E2348/69]
gi|217326563|ref|ZP_03442647.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. TW14588]
gi|218547629|ref|YP_002381420.1| undecaprenyl pyrophosphate synthase [Escherichia fergusonii ATCC
35469]
gi|218552754|ref|YP_002385667.1| undecaprenyl pyrophosphate synthase [Escherichia coli IAI1]
gi|218557115|ref|YP_002390028.1| undecaprenyl pyrophosphate synthase [Escherichia coli S88]
gi|218688049|ref|YP_002396261.1| undecaprenyl pyrophosphate synthase [Escherichia coli ED1a]
gi|218693639|ref|YP_002401306.1| undecaprenyl pyrophosphate synthase [Escherichia coli 55989]
gi|218698594|ref|YP_002406223.1| undecaprenyl pyrophosphate synthase [Escherichia coli IAI39]
gi|218703428|ref|YP_002410947.1| undecaprenyl pyrophosphate synthase [Escherichia coli UMN026]
gi|227884913|ref|ZP_04002718.1| undecaprenyl pyrophosphate synthase [Escherichia coli 83972]
gi|237704333|ref|ZP_04534814.1| undecaprenyl pyrophosphate synthase [Escherichia sp. 3_2_53FAA]
gi|238899572|ref|YP_002925368.1| undecaprenyl pyrophosphate synthase [Escherichia coli BW2952]
gi|254037593|ref|ZP_04871670.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia sp. 1_1_43]
gi|254160293|ref|YP_003043401.1| undecaprenyl pyrophosphate synthase [Escherichia coli B str.
REL606]
gi|254791307|ref|YP_003076144.1| undecaprenyl pyrophosphate synthase [Escherichia coli O157:H7 str.
TW14359]
gi|260842406|ref|YP_003220184.1| undecaprenyl pyrophosphate synthase [Escherichia coli O103:H2 str.
12009]
gi|291280996|ref|YP_003497814.1| Undecaprenyl pyrophosphate synthetase [Escherichia coli O55:H7 str.
CB9615]
gi|293403243|ref|ZP_06647340.1| undecaprenyl pyrophosphate synthetase [Escherichia coli FVEC1412]
gi|293418059|ref|ZP_06660681.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli B185]
gi|298378779|ref|ZP_06988663.1| undecaprenyl pyrophosphate synthase [Escherichia coli FVEC1302]
gi|301028667|ref|ZP_07191888.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
196-1]
gi|331640628|ref|ZP_08341776.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli H736]
gi|331645317|ref|ZP_08346428.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli M605]
gi|331651079|ref|ZP_08352107.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli M718]
gi|331661245|ref|ZP_08362177.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli TA206]
gi|331661548|ref|ZP_08362472.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli TA143]
gi|331666415|ref|ZP_08367296.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli TA271]
gi|331671680|ref|ZP_08372478.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli TA280]
gi|331680753|ref|ZP_08381412.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli H591]
gi|331681559|ref|ZP_08382196.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli H299]
gi|332282848|ref|ZP_08395261.1| undecaprenyl pyrophosphate synthetase [Shigella sp. D9]
gi|42560512|sp|P60472|UPPS_ECOLI RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|42560513|sp|P60473|UPPS_ECOL6 RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|42560514|sp|P60474|UPPS_ECO57 RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|42560515|sp|P60475|UPPS_SHIFL RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|34810685|pdb|1UEH|A Chain A, E. Coli Undecaprenyl Pyrophosphate Synthase In Complex
With Triton X-100, Magnesium And Sulfate
gi|34810686|pdb|1UEH|B Chain B, E. Coli Undecaprenyl Pyrophosphate Synthase In Complex
With Triton X-100, Magnesium And Sulfate
gi|42543896|pdb|1V7U|A Chain A, Crystal Structure Of Undecaprenyl Pyrophosphate Synthase
With Farnesyl Pyrophosphate
gi|42543897|pdb|1V7U|B Chain B, Crystal Structure Of Undecaprenyl Pyrophosphate Synthase
With Farnesyl Pyrophosphate
gi|62738378|pdb|1X06|A Chain A, Crystal Structure Of Undecaprenyl Pyrophosphate Synthase
In Complex With Mg, Ipp And Fspp
gi|62738379|pdb|1X07|A Chain A, Crystal Structure Of Undecaprenyl Pyrophosphate Synthase
In Complex With Mg And Ipp
gi|149241390|pdb|2E98|A Chain A, E. Coli Undecaprenyl Pyrophosphate Synthase In Complex
With Bph-629
gi|149241391|pdb|2E98|B Chain B, E. Coli Undecaprenyl Pyrophosphate Synthase In Complex
With Bph-629
gi|149241395|pdb|2E99|A Chain A, E. Coli Undecaprenyl Pyrophosphate Synthase In Complex
With Bph-608
gi|149241396|pdb|2E99|B Chain B, E. Coli Undecaprenyl Pyrophosphate Synthase In Complex
With Bph-608
gi|149241399|pdb|2E9A|A Chain A, E. Coli Undecaprenyl Pyrophosphate Synthase In Complex
With Bph-628
gi|149241400|pdb|2E9A|B Chain B, E. Coli Undecaprenyl Pyrophosphate Synthase In Complex
With Bph-628
gi|149241403|pdb|2E9C|A Chain A, E. Coli Undecaprenyl Pyrophosphate Synthase In Complex
With Bph-675
gi|149241404|pdb|2E9C|B Chain B, E. Coli Undecaprenyl Pyrophosphate Synthase In Complex
With Bph-675
gi|149241407|pdb|2E9D|A Chain A, E. Coli Undecaprenyl Pyrophosphate Synthase In Complex
With Bph-676
gi|149241408|pdb|2E9D|B Chain B, E. Coli Undecaprenyl Pyrophosphate Synthase In Complex
With Bph-676
gi|325534033|pdb|3QAS|B Chain B, Structure Of Undecaprenyl Diphosphate Synthase
gi|325534034|pdb|3QAS|A Chain A, Structure Of Undecaprenyl Diphosphate Synthase
gi|12512899|gb|AAG54476.1|AE005193_6 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
gi|26106517|gb|AAN78703.1|AE016755_203 Undecaprenyl pyrophosphate synthetase [Escherichia coli CFT073]
gi|1786371|gb|AAC73285.1| undecaprenyl pyrophosphate synthase [Escherichia coli str. K-12
substr. MG1655]
gi|13359632|dbj|BAB33599.1| undecaprenyl pyrophosphate synthetase [Escherichia coli O157:H7
str. Sakai]
gi|24050377|gb|AAN41826.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|30039973|gb|AAP15707.1| hypothetical protein S0167 [Shigella flexneri 2a str. 2457T]
gi|81239712|gb|ABB60422.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
gi|85674367|dbj|BAA77849.2| undecaprenyl pyrophosphate synthase [Escherichia coli str. K12
substr. W3110]
gi|91070818|gb|ABE05699.1| subunit of undecaprenyl diphosphate synthase [Escherichia coli
UTI89]
gi|110341985|gb|ABG68222.1| undecaprenyl pyrophosphate synthetase [Escherichia coli 536]
gi|115511583|gb|ABI99657.1| conserved hypothetical protein [Escherichia coli APEC O1]
gi|169756401|gb|ACA79100.1| undecaprenyl diphosphate synthase [Escherichia coli ATCC 8739]
gi|169887645|gb|ACB01352.1| undecaprenyl pyrophosphate synthase [Escherichia coli str. K-12
substr. DH10B]
gi|170518972|gb|ACB17150.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
SMS-3-5]
gi|187767684|gb|EDU31528.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC4196]
gi|188014574|gb|EDU52696.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC4113]
gi|189000390|gb|EDU69376.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC4076]
gi|189357032|gb|EDU75451.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC4401]
gi|189360694|gb|EDU79113.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC4486]
gi|189371076|gb|EDU89492.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC869]
gi|189375226|gb|EDU93642.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC508]
gi|190903625|gb|EDV63342.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli B7A]
gi|190906966|gb|EDV66568.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli F11]
gi|192931169|gb|EDV83772.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli E22]
gi|192959043|gb|EDV89479.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
E110019]
gi|194413701|gb|EDX29981.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli B171]
gi|194421939|gb|EDX37944.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli 101-1]
gi|208727355|gb|EDZ76956.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC4206]
gi|208733413|gb|EDZ82100.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC4045]
gi|208738431|gb|EDZ86113.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC4042]
gi|209158254|gb|ACI35687.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC4115]
gi|209745804|gb|ACI71209.1| undecaprenyl pyrophosphate synthetase [Escherichia coli]
gi|209745806|gb|ACI71210.1| undecaprenyl pyrophosphate synthetase [Escherichia coli]
gi|209745808|gb|ACI71211.1| undecaprenyl pyrophosphate synthetase [Escherichia coli]
gi|209745810|gb|ACI71212.1| undecaprenyl pyrophosphate synthetase [Escherichia coli]
gi|209745812|gb|ACI71213.1| undecaprenyl pyrophosphate synthetase [Escherichia coli]
gi|215263407|emb|CAS07727.1| undecaprenyl pyrophosphate synthase [Escherichia coli O127:H6 str.
E2348/69]
gi|217322784|gb|EEC31208.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. TW14588]
gi|218350371|emb|CAU96054.1| undecaprenyl pyrophosphate synthase [Escherichia coli 55989]
gi|218355170|emb|CAQ87777.1| undecaprenyl pyrophosphate synthase [Escherichia fergusonii ATCC
35469]
gi|218359522|emb|CAQ97060.1| undecaprenyl pyrophosphate synthase [Escherichia coli IAI1]
gi|218363884|emb|CAR01549.1| undecaprenyl pyrophosphate synthase [Escherichia coli S88]
gi|218368580|emb|CAR16317.1| undecaprenyl pyrophosphate synthase [Escherichia coli IAI39]
gi|218425613|emb|CAR06399.1| undecaprenyl pyrophosphate synthase [Escherichia coli ED1a]
gi|218430525|emb|CAR11391.1| undecaprenyl pyrophosphate synthase [Escherichia coli UMN026]
gi|222032004|emb|CAP74743.1| Undecaprenyl pyrophosphate synthetase [Escherichia coli LF82]
gi|226840699|gb|EEH72701.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia sp. 1_1_43]
gi|226902245|gb|EEH88504.1| undecaprenyl pyrophosphate synthase [Escherichia sp. 3_2_53FAA]
gi|227838051|gb|EEJ48517.1| undecaprenyl pyrophosphate synthase [Escherichia coli 83972]
gi|238863761|gb|ACR65759.1| undecaprenyl pyrophosphate synthase [Escherichia coli BW2952]
gi|242376005|emb|CAQ30688.1| undecaprenyl diphosphate synthase [Escherichia coli BL21(DE3)]
gi|253972194|gb|ACT37865.1| undecaprenyl pyrophosphate synthase [Escherichia coli B str.
REL606]
gi|253976403|gb|ACT42073.1| undecaprenyl pyrophosphate synthase [Escherichia coli BL21(DE3)]
gi|254590707|gb|ACT70068.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase)
[Escherichia coli O157:H7 str. TW14359]
gi|257757553|dbj|BAI29050.1| undecaprenyl pyrophosphate synthase [Escherichia coli O103:H2 str.
12009]
gi|281177399|dbj|BAI53729.1| undecaprenyl pyrophosphate synthetase [Escherichia coli SE15]
gi|281599529|gb|ADA72513.1| Undecaprenyl pyrophosphate synthetase [Shigella flexneri 2002017]
gi|284919949|emb|CBG33004.1| undecaprenyl pyrophosphate synthetase [Escherichia coli 042]
gi|290760869|gb|ADD54830.1| Undecaprenyl pyrophosphate synthetase [Escherichia coli O55:H7 str.
CB9615]
gi|291430158|gb|EFF03172.1| undecaprenyl pyrophosphate synthetase [Escherichia coli FVEC1412]
gi|291430777|gb|EFF03775.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli B185]
gi|298281113|gb|EFI22614.1| undecaprenyl pyrophosphate synthase [Escherichia coli FVEC1302]
gi|299878299|gb|EFI86510.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
196-1]
gi|307552024|gb|ADN44799.1| subunit of undecaprenyl diphosphate synthase [Escherichia coli ABU
83972]
gi|309700382|emb|CBI99670.1| undecaprenyl pyrophosphate synthetase [Escherichia coli ETEC
H10407]
gi|315134864|dbj|BAJ42023.1| undecaprenyl pyrophosphate synthase [Escherichia coli DH1]
gi|320180920|gb|EFW55842.1| Undecaprenyl pyrophosphate synthetase [Shigella boydii ATCC 9905]
gi|320190300|gb|EFW64950.1| Undecaprenyl pyrophosphate synthetase [Escherichia coli O157:H7
str. EC1212]
gi|320196950|gb|EFW71571.1| Undecaprenyl pyrophosphate synthetase [Escherichia coli WV_060327]
gi|320200301|gb|EFW74887.1| Undecaprenyl pyrophosphate synthetase [Escherichia coli EC4100B]
gi|323935014|gb|EGB31387.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli E1520]
gi|323939950|gb|EGB36148.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli E482]
gi|323945649|gb|EGB41698.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli H120]
gi|323950827|gb|EGB46704.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli H252]
gi|323955135|gb|EGB50910.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli H263]
gi|323959935|gb|EGB55582.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli H489]
gi|323970653|gb|EGB65909.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli TA007]
gi|323975658|gb|EGB70754.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
TW10509]
gi|324112415|gb|EGC06392.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia fergusonii
B253]
gi|324118294|gb|EGC12189.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli E1167]
gi|326339771|gb|EGD63579.1| Undecaprenyl pyrophosphate synthetase [Escherichia coli O157:H7
str. 1044]
gi|326345106|gb|EGD68849.1| Undecaprenyl pyrophosphate synthetase [Escherichia coli O157:H7
str. 1125]
gi|330910024|gb|EGH38534.1| undecaprenyl pyrophosphate synthetase [Escherichia coli AA86]
gi|331040374|gb|EGI12581.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli H736]
gi|331046074|gb|EGI18193.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli M605]
gi|331051533|gb|EGI23582.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli M718]
gi|331052287|gb|EGI24326.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli TA206]
gi|331061463|gb|EGI33426.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli TA143]
gi|331066626|gb|EGI38503.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli TA271]
gi|331071525|gb|EGI42882.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli TA280]
gi|331072216|gb|EGI43552.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli H591]
gi|331081780|gb|EGI52941.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli H299]
gi|332105200|gb|EGJ08546.1| undecaprenyl pyrophosphate synthetase [Shigella sp. D9]
Length = 253
Score = 294 bits (754), Expect = 5e-78, Method: Composition-based stats.
Identities = 91/239 (38%), Positives = 142/239 (59%), Gaps = 4/239 (1%)
Query: 6 MSSSPP----DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+S P H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++
Sbjct: 9 LSEKLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY 68
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+S L++L L SL ++N+++R+IG+ + + ++++E
Sbjct: 69 AFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSE 128
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T NTGL L IA NY R +I + ++ + + ++ G++ +D ++ +++ ++
Sbjct: 129 ALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAP 188
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRTGGE R+S+FLLWQ+AY+E F WPDF + F ALN + R+RRFGG
Sbjct: 189 VDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGGTE 247
>gi|291550818|emb|CBL27080.1| undecaprenyl diphosphate synthase [Ruminococcus torques L2-14]
Length = 236
Score = 294 bits (754), Expect = 5e-78, Method: Composition-based stats.
Identities = 113/233 (48%), Positives = 160/233 (68%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P HI II+DGNGRWA ++G+PR GH +G + +I A +GIK LT++AFS NW
Sbjct: 2 NVPQHIAIILDGNGRWAKSKGMPRNYGHAQGAKNVEKICEEAWRMGIKYLTVYAFSTENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP +E+ L+KL+++++K + KN++K+RVIG+ LD+DI ++E E+ T N
Sbjct: 62 SRPQNEVDALMKLLRNYMKTCLKTAAKNDMKIRVIGDIEPLDEDIKGRIRELEEATASNG 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GLN IA NY SRDEI+RA + + +D +G V +D SL YLDT+D+PDPDL+IRT
Sbjct: 122 GLNFTIALNYGSRDEITRAARKLAKDCAAGKVNPDTIDESLFNSYLDTNDIPDPDLMIRT 181
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
GE+RLS++LLWQ+AYSEF F WP F++E A+ +YN R RRFGG+ +
Sbjct: 182 SGEQRLSNYLLWQLAYSEFYFTDIPWPAFTKEELIKAVEEYNRRHRRFGGVEE 234
>gi|116072465|ref|ZP_01469732.1| Di-trans-poly-cis-decaprenylcistransferase [Synechococcus sp.
BL107]
gi|116064987|gb|EAU70746.1| Di-trans-poly-cis-decaprenylcistransferase [Synechococcus sp.
BL107]
Length = 260
Score = 294 bits (754), Expect = 5e-78, Method: Composition-based stats.
Identities = 91/236 (38%), Positives = 142/236 (60%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P H+ +IMDGNGRWA A+GLPR GHR G+E + ++ GI LT +AF
Sbjct: 20 ELDPARLPAHVAVIMDGNGRWAKAKGLPRVVGHRAGVEALKSTLRQCSDWGIGALTAYAF 79
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP E++ L+ L + L+ SL+ +++R +G+ L + + ++ +A ++
Sbjct: 80 STENWSRPGDEVNFLMTLFERVLQSELRSLEDEQVRIRFLGDLDGLPEKLQVLIDDATER 139
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NTG++ + NY R E+ RA + + + SG++ +D + A+ L T+ DPD
Sbjct: 140 TAKNTGIHFNVCTNYGGRRELVRAAQRLAKQAASGTIDPEAIDENSFARELFTAGDQDPD 199
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
L+IRT GE R+S+FLLWQ+AY+E +WPDF+ ++ AL Y R+RRFGGL
Sbjct: 200 LLIRTSGEYRISNFLLWQLAYAEIHVTDVFWPDFNADVLKQALLDYQGRNRRFGGL 255
>gi|332881255|ref|ZP_08448905.1| di-trans,poly-cis-decaprenylcistransferase [Capnocytophaga sp. oral
taxon 329 str. F0087]
gi|332680631|gb|EGJ53578.1| di-trans,poly-cis-decaprenylcistransferase [Capnocytophaga sp. oral
taxon 329 str. F0087]
Length = 246
Score = 294 bits (754), Expect = 5e-78, Method: Composition-based stats.
Identities = 101/239 (42%), Positives = 151/239 (63%), Gaps = 2/239 (0%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ ++ P H+ IIMDGNGRWA A+GLPR AGH++G+E +I A +G+K LT++ F
Sbjct: 6 EIDAARIPRHVAIIMDGNGRWAKAKGLPRTAGHQEGVETVKKITEEAVRLGVKYLTLYTF 65
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RPV EI+ L+ LI L+ KNN++ RVIG+ + + + L+E
Sbjct: 66 STENWNRPVPEIAALMGLILDHLEDEI--FMKNNVRFRVIGDMSRIPEVVRVRLEECMQH 123
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T N + + IA +YSSR E+++A++ I +++++G++ + I +L T +PDPD
Sbjct: 124 TAANEKMTMVIALSYSSRWELAQAMRQIAEEVQAGALLPSQITEETIEAHLVTRFMPDPD 183
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRTGGE R+S++LLWQ AY+EF F YWPDF F A+ Y R+RRFG S++
Sbjct: 184 LLIRTGGEYRISNYLLWQCAYTEFYFCDTYWPDFDENEFRKAIADYQSRERRFGKTSEQ 242
>gi|258647583|ref|ZP_05735052.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella tannerae
ATCC 51259]
gi|260852380|gb|EEX72249.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella tannerae
ATCC 51259]
Length = 249
Score = 294 bits (754), Expect = 5e-78, Method: Composition-based stats.
Identities = 101/240 (42%), Positives = 151/240 (62%), Gaps = 2/240 (0%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + P H+ IIMDGNGRWA ARG R GH++G+E I AA+++G+K LT++
Sbjct: 5 AQIDPKRIPMHVAIIMDGNGRWATARGWDRSVGHQQGVETVRRITTAASDLGVKYLTLYT 64
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RP E++ L+ LI + L++ +NN+++R++G+ L +D+ L++
Sbjct: 65 FSTENWNRPPEEVAALMSLIFTSLEEEL--FMRNNVRLRIVGDLERLPEDVRTSLEDLTA 122
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
+T N+G+ L +A +YS+R EI+ A + I G + D+ I + L TS +PDP
Sbjct: 123 RTAENSGMTLVLALSYSARWEITEAARKIAARTAKGELALQDITEKTITEALTTSFMPDP 182
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL+IRTGGE RLS++LLWQ AYSE F +WPDF+ E F+ A+ Y R+RRFG S++
Sbjct: 183 DLLIRTGGELRLSNYLLWQCAYSELYFCDTFWPDFNEEAFYAAVADYQSRERRFGKTSRQ 242
>gi|46143268|ref|ZP_00135561.2| COG0020: Undecaprenyl pyrophosphate synthase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|190149707|ref|YP_001968232.1| undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|307245246|ref|ZP_07527337.1| Undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307249637|ref|ZP_07531623.1| Undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|307251965|ref|ZP_07533866.1| Undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307254193|ref|ZP_07536038.1| Undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307260889|ref|ZP_07542575.1| Undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|307263016|ref|ZP_07544638.1| Undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|189914838|gb|ACE61090.1| undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|306853890|gb|EFM86104.1| Undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306858335|gb|EFM90405.1| Undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|306860657|gb|EFM92669.1| Undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306862893|gb|EFM94842.1| Undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306869456|gb|EFN01247.1| Undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|306871642|gb|EFN03364.1| Undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 230
Score = 294 bits (754), Expect = 5e-78, Method: Composition-based stats.
Identities = 99/229 (43%), Positives = 139/229 (60%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IIMDGNGRWA +G R GH+ G++ V+ AA+ GIK LT++AFS NW
Sbjct: 1 MPQHVAIIMDGNGRWAKQQGKLRVFGHQNGVKAVRSAVSFAAKHGIKVLTLYAFSSENWS 60
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP +E+S L+ L L L KNNI++ +IGN+ + + + + E+E T NTG
Sbjct: 61 RPEAEVSALMALFMRALDSEVKKLHKNNIRLNIIGNKSAFSESLQKRIAESEKLTENNTG 120
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L IA NY S +I++A + + ++ G + D+ + L T P DL+IRT
Sbjct: 121 LILNIAANYGSHWDITQAAQQLAIKVKLGEITVSDITPERLQNALVTGTQPLVDLLIRTS 180
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GE+R+S+FLLWQ+AY+E VF P WPDF+ + F A+ Y RDRRFGG
Sbjct: 181 GEQRISNFLLWQIAYAELVFSPVLWPDFNDDSFSEAIIAYQQRDRRFGG 229
>gi|315641201|ref|ZP_07896278.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus italicus
DSM 15952]
gi|315482968|gb|EFU73487.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus italicus
DSM 15952]
Length = 270
Score = 294 bits (754), Expect = 6e-78, Method: Composition-based stats.
Identities = 106/238 (44%), Positives = 150/238 (63%), Gaps = 4/238 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P+HI IIMDGNGRWA R LPR AGH++G+E +I A+++G+K LT++AFS NW
Sbjct: 31 PVPEHIAIIMDGNGRWAQNRRLPRVAGHKEGMETVKKITKHASKLGVKVLTLYAFSTENW 90
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP E+ L++L F K L K N+KV V+G + L +K A DQT++NT
Sbjct: 91 KRPTEEVDFLMQLPVDFFDKFVPELIKENVKVHVMGYKEHLPAHTQKAVKRAIDQTKMNT 150
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDL 184
G+ L A NY SR EI A++ I +++ + + ++AK+L T +P DP L
Sbjct: 151 GMVLNFALNYGSRAEIITAVQEIASEVKENQLAVDGISEEVLAKHLMTGFLPIELRDPSL 210
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IRT GE+R+S+FLLWQ+AYSEF F +WPDF +L A+ Y RDRRFGG+ ++
Sbjct: 211 VIRTSGEERISNFLLWQIAYSEFFFTKAFWPDFDDKLLEEAIAIYQHRDRRFGGVKEE 268
>gi|222151093|ref|YP_002560247.1| undecaprenyl pyrophosphate synthetase [Macrococcus caseolyticus
JCSC5402]
gi|222120216|dbj|BAH17551.1| undecaprenyl pyrophosphate synthetase [Macrococcus caseolyticus
JCSC5402]
Length = 249
Score = 294 bits (754), Expect = 6e-78, Method: Composition-based stats.
Identities = 101/236 (42%), Positives = 148/236 (62%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P HI IIMDGNGRWA A+ +PR GH +G++ +I A+++G++ LT++AF
Sbjct: 14 QLNKAHIPKHIAIIMDGNGRWAKAKKMPRIKGHYEGMQTVKKITGHASDLGVEYLTLYAF 73
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP E++ L+KL FL L N+KV IG L + + EA+++
Sbjct: 74 STENWSRPKDEVNYLMKLPGDFLNTFLPELVAKNVKVETIGFIDDLPEHTKHAVLEAKER 133
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NTGL L A NY R EI A++ I + +SG + +++ S ++L T +PDP+
Sbjct: 134 TKDNTGLKLVFALNYGGRKEIISAVQLIAEQYKSGEISLDEINESQFNEFLFTKGMPDPE 193
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
L+IRT GE+RLS+FL+WQ +YSEFVF+ EYWPDF+ + ++ Y R RRFGGL
Sbjct: 194 LLIRTSGEERLSNFLIWQCSYSEFVFVDEYWPDFTVQSLDKCISIYQNRHRRFGGL 249
>gi|257090680|ref|ZP_05585041.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis CH188]
gi|312905220|ref|ZP_07764340.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0635]
gi|256999492|gb|EEU86012.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis CH188]
gi|310631457|gb|EFQ14740.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0635]
gi|315579286|gb|EFU91477.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0630]
Length = 271
Score = 294 bits (754), Expect = 6e-78, Method: Composition-based stats.
Identities = 101/240 (42%), Positives = 144/240 (60%), Gaps = 4/240 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
P HI IIMDGNGRWA R LPR AGH++G++ +I A+ +GIK LT++AFS
Sbjct: 22 KEGQIPQHIAIIMDGNGRWAQNRRLPRIAGHKEGMDTVKKITKHASHLGIKVLTLYAFST 81
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP E++ L++L F L K N+KV V+G + L +K A +QT+
Sbjct: 82 ENWKRPTDEVNFLMQLPVDFFDTFVPELIKENVKVNVMGYQEFLPSHTQDAVKRAIEQTK 141
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----D 181
NTG+ L A NY +R E+ A+K I ++ + + ++ IA +L T +P D
Sbjct: 142 DNTGMVLNFALNYGARAELLTAMKQIAAEVSEKAYTADEITEETIADHLMTGFLPTELRD 201
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
P+L+IRT GE+R+S+FLLWQ+AYSE F WPDFS + A+ + R+RRFGGL +
Sbjct: 202 PELLIRTSGEERISNFLLWQIAYSELFFTKALWPDFSGDTLETAIASFQNRNRRFGGLKE 261
>gi|27467854|ref|NP_764491.1| undecaprenyl pyrophosphatase synthetase [Staphylococcus epidermidis
ATCC 12228]
gi|57866734|ref|YP_188409.1| undecaprenyl diphosphate synthase [Staphylococcus epidermidis
RP62A]
gi|251810691|ref|ZP_04825164.1| Di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis BCM-HMP0060]
gi|282876308|ref|ZP_06285175.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis SK135]
gi|293366776|ref|ZP_06613452.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis M23864:W2(grey)]
gi|42559968|sp|Q8CPG7|UPPS_STAES RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|73920279|sp|Q5HPT1|UPPS_STAEQ RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|27315399|gb|AAO04533.1|AE016747_30 undecaprenyl pyrophosphatase synthetase [Staphylococcus epidermidis
ATCC 12228]
gi|57637392|gb|AAW54180.1| undecaprenyl diphosphate synthase [Staphylococcus epidermidis
RP62A]
gi|251805851|gb|EES58508.1| Di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis BCM-HMP0060]
gi|281295333|gb|EFA87860.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis SK135]
gi|291319077|gb|EFE59447.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis M23864:W2(grey)]
gi|329736327|gb|EGG72599.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU028]
gi|329736625|gb|EGG72891.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU045]
Length = 256
Score = 294 bits (754), Expect = 6e-78, Method: Composition-based stats.
Identities = 100/234 (42%), Positives = 148/234 (63%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P+H+ IIMDGNGRWA R +PR GH +G++ +I A+++GIK LT++AFS NW
Sbjct: 23 NIPEHVAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITREASDIGIKYLTLYAFSTENW 82
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP SE++ ++ L +FLK L + N+K+ IG L + + A+ +T+ NT
Sbjct: 83 SRPESEVNYIMNLPVNFLKTFLPELIEKNVKIETIGFYEGLPQSTIDAIDFAKAKTQHNT 142
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL L A NY R EI +++K I+ +++ S +D +LI ++L T PDPDL+IRT
Sbjct: 143 GLTLVFAINYGGRAEIIQSMKAIYNELQLNGQGSEVIDEALIKRHLMTHSYPDPDLLIRT 202
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+R+S+FL+WQ +YSEF+F + WPDF + L Y R RRFGGLS++
Sbjct: 203 SGEQRISNFLIWQASYSEFIFNEKLWPDFDEKELRECLKIYQSRQRRFGGLSEE 256
>gi|313675875|ref|YP_004053871.1| undecaprenyl diphosphate synthase [Marivirga tractuosa DSM 4126]
gi|312942573|gb|ADR21763.1| undecaprenyl diphosphate synthase [Marivirga tractuosa DSM 4126]
Length = 242
Score = 294 bits (754), Expect = 6e-78, Method: Composition-based stats.
Identities = 96/239 (40%), Positives = 147/239 (61%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M ++ ++ P H+ +IMDGNGRWA +G R GH+ I+ + V AE+GI +L++
Sbjct: 1 MEKNLDKNNLPKHVSVIMDGNGRWAKKQGAARVFGHKNAIKAVRDTVEGCAELGISHLSL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP +E+ L++L+ S +K +L KN++K+ IG+ +L LK A
Sbjct: 61 YAFSTENWGRPKNEVDALMQLLVSTIKSEMKTLMKNDVKLSSIGDIENLPGKCFNELKAA 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
++QT N GLNL +A NYS + +I++A K ++G + D+ S +L T+ +P
Sbjct: 121 KEQTAQNKGLNLILALNYSGKWDITQACKKALVACKNGEMSDKDLTDSNFESFLSTAGIP 180
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DP+L+IRT GE R+S+F+LWQ+AYSE WPDF +E +AL Y R+RRFG +
Sbjct: 181 DPELLIRTSGEFRISNFMLWQLAYSEIYITEVLWPDFRKEHLINALRNYQTRERRFGKV 239
>gi|260775281|ref|ZP_05884178.1| undecaprenyl pyrophosphate synthetase [Vibrio coralliilyticus ATCC
BAA-450]
gi|260608462|gb|EEX34627.1| undecaprenyl pyrophosphate synthetase [Vibrio coralliilyticus ATCC
BAA-450]
Length = 251
Score = 294 bits (754), Expect = 6e-78, Method: Composition-based stats.
Identities = 96/240 (40%), Positives = 150/240 (62%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ + S P HI IIMDGNGRWA A+G PR GH+ G+ + ++ +A++GIK +T+FA
Sbjct: 4 SQLSPESLPKHIAIIMDGNGRWAKAQGKPRVFGHKNGVAAVRKAISTSAKLGIKAITLFA 63
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP E+ L++L + L L KNN+++RVIG+ ++ + + +AE
Sbjct: 64 FSSENWRRPEEEVGVLMELFITVLSTEVKKLHKNNLRLRVIGDTSRFNERLQKKIAQAEA 123
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T N+G+ + IA NY + +I A K I + + G + + ++D +LI ++L SD+P+
Sbjct: 124 LTADNSGMVINIAANYGGKWDIVEATKVIAEKVSKGELSAGEIDEALITQHLTMSDLPEV 183
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL+IRT GE R+S+F+LWQ+AY+E F P YWP+F A+ + R+RRFG ++
Sbjct: 184 DLLIRTSGECRISNFMLWQMAYAEMYFTPIYWPEFDENSLIEAVTWFVNRERRFGCTGEQ 243
>gi|261211374|ref|ZP_05925662.1| undecaprenyl pyrophosphate synthetase [Vibrio sp. RC341]
gi|260839329|gb|EEX65955.1| undecaprenyl pyrophosphate synthetase [Vibrio sp. RC341]
Length = 250
Score = 294 bits (753), Expect = 6e-78, Method: Composition-based stats.
Identities = 92/239 (38%), Positives = 146/239 (61%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S+ P HI IIMDGNGRWA A+G PR GH+ G+ + ++ +A +GI+ +T+FAF
Sbjct: 5 SLSQDVLPKHIAIIMDGNGRWAKAQGKPRVFGHKNGVAAVRKTISTSARLGIQAITLFAF 64
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRRP E+ L++L + L L KNN+++RVIG++ + + + +AE
Sbjct: 65 SSENWRRPEEEVGVLMELFITVLSTEIKKLHKNNLRLRVIGDKSRFSERLQSKIAQAEQL 124
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NTG+ + IA NY + +I +A + + + G + D+D ++ ++L +D+PD D
Sbjct: 125 TASNTGMVVNIAANYGGQWDILQATQALAAKVTQGELQPTDIDEAVFKQHLTMADLPDVD 184
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRT GE R+S+F+LWQ+AY+E F P +WP+F A+ + R+RRFG ++
Sbjct: 185 LLIRTSGECRISNFMLWQLAYAEMYFTPVFWPEFDENCLIEAVTWFVNRERRFGCTGEQ 243
>gi|255534361|ref|YP_003094732.1| Undecaprenyl pyrophosphate synthetase [Flavobacteriaceae bacterium
3519-10]
gi|255340557|gb|ACU06670.1| Undecaprenyl pyrophosphate synthetase [Flavobacteriaceae bacterium
3519-10]
Length = 261
Score = 294 bits (753), Expect = 6e-78, Method: Composition-based stats.
Identities = 88/239 (36%), Positives = 131/239 (54%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P H+ IIMDGNGRWA +RG R GH+ I+ E V A E+ I LT++ F
Sbjct: 18 KIAPDHLPQHVAIIMDGNGRWAKSRGQKRTFGHKHAIKAVREAVNACNEIHIPYLTLYTF 77
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP E+ L+ LI L + +++ +IG+ L + ++ D
Sbjct: 78 SSENWNRPEDEVDTLMGLISETLILEAEEIFTKGLRMHIIGDIEKLPQLVREQMQHLVDI 137
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N NL +A +Y S E+ A+K I +++G + + + +L T D P D
Sbjct: 138 TKDNKQGNLILALSYGSHSEMLNAVKQISTKVKNGELSEEQITEKVFEDHLYTKDFPPVD 197
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRT GE R+S+FLLWQ+AY+E F+ WPDF RE FF ++ Y ++RRFG S++
Sbjct: 198 LLIRTSGEVRISNFLLWQIAYAELQFLDILWPDFGREDFFKCISDYQHKERRFGKTSEQ 256
>gi|91223477|ref|ZP_01258742.1| undecaprenyl diphosphate synthase [Vibrio alginolyticus 12G01]
gi|269966255|ref|ZP_06180344.1| Undecaprenyl diphosphate synthase [Vibrio alginolyticus 40B]
gi|91191563|gb|EAS77827.1| undecaprenyl diphosphate synthase [Vibrio alginolyticus 12G01]
gi|269829170|gb|EEZ83415.1| Undecaprenyl diphosphate synthase [Vibrio alginolyticus 40B]
Length = 251
Score = 294 bits (753), Expect = 6e-78, Method: Composition-based stats.
Identities = 100/236 (42%), Positives = 151/236 (63%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S S P HI IIMDGNGRWA ++G PR GH+KG+ + VAAA+++GI+ +T+FAFS
Sbjct: 8 SDSLPKHIAIIMDGNGRWAKSKGKPRVFGHKKGVSAVRKTVAAASKLGIRAMTLFAFSSE 67
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+ L++L + L L KNN+++RVIG+ + + + EAE+ T
Sbjct: 68 NWRRPEEEVGLLMELFITVLSSEVKKLHKNNLRLRVIGDTSRFSERLQKKIVEAENLTAD 127
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTG+ + IA NY + +I+ A K + +G + D++ LI ++L +D+P+ DL+I
Sbjct: 128 NTGMVINIAANYGGKWDITEAAKTLALKARNGEIRVEDINEQLITEHLTMADLPEVDLLI 187
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE R+S+F+LWQ+AY+E F PEYWP+F + A+ + R+RRFG ++
Sbjct: 188 RTSGECRISNFMLWQMAYAEMYFTPEYWPEFDEDSLVEAVTWFINRERRFGCTGEQ 243
>gi|56459949|ref|YP_155230.1| undecaprenyl pyrophosphate synthase [Idiomarina loihiensis L2TR]
gi|56178959|gb|AAV81681.1| Undecaprenyl pyrophosphate synthase [Idiomarina loihiensis L2TR]
Length = 257
Score = 294 bits (753), Expect = 6e-78, Method: Composition-based stats.
Identities = 101/233 (43%), Positives = 148/233 (63%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IIMDGNGRWA RG R GH+ G E + VA A GI++LT+FAFS NW+
Sbjct: 11 VPKHVAIIMDGNGRWAKQRGKIRTFGHKAGAEAVRKAVAFARRNGIESLTLFAFSSENWK 70
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP +E+S L++L S LK L N+I++R++G++ + + + EAE+QTR N+G
Sbjct: 71 RPATEVSVLMELFMSVLKSEIKKLDDNDIRLRIVGDKEAFSKRLQKRMSEAEEQTRSNSG 130
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
LNL IA NY + +I++A + + + +++G + ++ IA L +D P PDL+IRTG
Sbjct: 131 LNLNIAANYGGQWDITQASRRLAERVKAGEIEPAEITEQTIAGELMMADQPLPDLLIRTG 190
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE R+S+FLLWQ+AY+E F WPDF F A+ + R+RRFG S++
Sbjct: 191 GEHRISNFLLWQLAYAELYFTSVLWPDFDDTAFAQAITDFAQRERRFGLTSEQ 243
>gi|90423940|ref|YP_532310.1| undecaprenyl diphosphate synthase [Rhodopseudomonas palustris
BisB18]
gi|90105954|gb|ABD87991.1| Undecaprenyl pyrophosphate synthetase [Rhodopseudomonas palustris
BisB18]
Length = 252
Score = 294 bits (753), Expect = 6e-78, Method: Composition-based stats.
Identities = 121/236 (51%), Positives = 164/236 (69%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
SS P H+ IIMDGNGRWAAARGLPR GHR+G++ +V AA E+GI LTIF+FS
Sbjct: 14 SSEVPVHVAIIMDGNGRWAAARGLPRAEGHRRGVDALRRVVRAANELGIAYLTIFSFSSE 73
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP SEI +L L++ F++ +L ++ ++VRVIG R L+ D+ +L EAE+ TR
Sbjct: 74 NWSRPASEIGDLFGLLRRFIRNDLATLHRDGVRVRVIGERDGLESDLCALLTEAEELTRN 133
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NT LNL +AFNY SR EI+ A + + +++ G +D +++YLD D+PDPDLII
Sbjct: 134 NTRLNLVVAFNYGSRQEIANAAQRLAREVAEGKRDPASIDPDSLSQYLDAPDIPDPDLII 193
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE+RLS+FL+WQ AYSE VF+P +WPDF + A+ +Y R+RRFGGL+ K
Sbjct: 194 RTSGEQRLSNFLMWQAAYSELVFVPIHWPDFDKAALEGAIAEYARRERRFGGLAAK 249
>gi|292670558|ref|ZP_06603984.1| di-trans,poly-cis-decaprenylcistransferase [Selenomonas noxia ATCC
43541]
gi|292647724|gb|EFF65696.1| di-trans,poly-cis-decaprenylcistransferase [Selenomonas noxia ATCC
43541]
Length = 275
Score = 294 bits (753), Expect = 6e-78, Method: Composition-based stats.
Identities = 104/239 (43%), Positives = 148/239 (61%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ +S P H+ I+MDGNGRWA A+G R AGH G IV AA+++GI+ LT++AFS
Sbjct: 37 LDRTSMPRHVAIVMDGNGRWAKAQGRSRSAGHEAGAHTLKRIVRAASDMGIEVLTVYAFS 96
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+ L+ L SFL K + N+++ IG R D L ++EAE++T
Sbjct: 97 TENWKRPKIEVDFLLNLFDSFLTKEIAEMHAENVRISFIGRRDRFTDRFLRRMQEAEERT 156
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NTG++ +A NY S+DEI RA + + + +G + + ++D + + LDT+ P DL
Sbjct: 157 ADNTGIHFNLAANYGSQDEILRAARTLAERAAAGEITAEEIDEEIFSHALDTAGDPPVDL 216
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
IRT G+ RLS+FLLWQ AY+E F YWPDF+ E F A+ + R RRFGGLS +G
Sbjct: 217 FIRTSGDLRLSNFLLWQSAYAELYFTDTYWPDFTPEEFARAIEDFAGRSRRFGGLSAEG 275
>gi|29376987|ref|NP_816141.1| undecaprenyl diphosphate synthase [Enterococcus faecalis V583]
gi|227519783|ref|ZP_03949832.1| Di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0104]
gi|227554031|ref|ZP_03984078.1| Di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
HH22]
gi|229545096|ref|ZP_04433821.1| Di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX1322]
gi|256616951|ref|ZP_05473797.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis ATCC
4200]
gi|256763177|ref|ZP_05503757.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis T3]
gi|256853850|ref|ZP_05559215.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis T8]
gi|256961224|ref|ZP_05565395.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis
Merz96]
gi|257081938|ref|ZP_05576299.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis E1Sol]
gi|257419945|ref|ZP_05596939.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis T11]
gi|293384174|ref|ZP_06630067.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
R712]
gi|293386986|ref|ZP_06631555.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
S613]
gi|307276783|ref|ZP_07557895.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX2134]
gi|307290453|ref|ZP_07570367.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0411]
gi|312907877|ref|ZP_07766860.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
DAPTO 512]
gi|312978594|ref|ZP_07790332.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
DAPTO 516]
gi|42559797|sp|Q831K9|UPPS_ENTFA RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|29344452|gb|AAO82211.1| undecaprenyl diphosphate synthase [Enterococcus faecalis V583]
gi|227072763|gb|EEI10726.1| Di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0104]
gi|227176855|gb|EEI57827.1| Di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
HH22]
gi|229309789|gb|EEN75776.1| Di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX1322]
gi|256596478|gb|EEU15654.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis ATCC
4200]
gi|256684428|gb|EEU24123.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis T3]
gi|256710793|gb|EEU25836.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis T8]
gi|256951720|gb|EEU68352.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis
Merz96]
gi|256989968|gb|EEU77270.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis E1Sol]
gi|257161773|gb|EEU91733.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecalis T11]
gi|291078489|gb|EFE15853.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
R712]
gi|291083656|gb|EFE20619.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
S613]
gi|295113527|emb|CBL32164.1| Undecaprenyl pyrophosphate synthetase [Enterococcus sp. 7L76]
gi|306498486|gb|EFM67989.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0411]
gi|306506560|gb|EFM75718.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX2134]
gi|310625968|gb|EFQ09251.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
DAPTO 512]
gi|311288743|gb|EFQ67299.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
DAPTO 516]
gi|315030251|gb|EFT42183.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX4000]
gi|315161754|gb|EFU05771.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0645]
gi|315166527|gb|EFU10544.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX1341]
gi|315170211|gb|EFU14228.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX1342]
gi|315574690|gb|EFU86881.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0309B]
gi|315580935|gb|EFU93126.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX0309A]
Length = 271
Score = 294 bits (753), Expect = 6e-78, Method: Composition-based stats.
Identities = 100/240 (41%), Positives = 144/240 (60%), Gaps = 4/240 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
P HI IIMDGNGRWA R LPR AGH++G++ +I A+ +G+K LT++AFS
Sbjct: 22 KEGQIPQHIAIIMDGNGRWAQNRRLPRIAGHKEGMDTVKKITKHASHLGVKVLTLYAFST 81
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP E++ L++L F L K N+KV V+G + L +K A +QT+
Sbjct: 82 ENWKRPTDEVNFLMQLPVDFFDTFVPELIKENVKVNVMGYQEFLPSHTQDAVKRAIEQTK 141
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----D 181
NTG+ L A NY +R E+ A+K I ++ + + ++ IA +L T +P D
Sbjct: 142 DNTGMVLNFALNYGARAELLTAMKQIAAEVSEKAYTADEITEETIADHLMTGFLPTELRD 201
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
P+L+IRT GE+R+S+FLLWQ+AYSE F WPDFS + A+ + R+RRFGGL +
Sbjct: 202 PELLIRTSGEERISNFLLWQIAYSELFFTKALWPDFSGDTLETAIASFQNRNRRFGGLKE 261
>gi|86130764|ref|ZP_01049363.1| undecaprenyl pyrophosphate synthetase [Dokdonia donghaensis MED134]
gi|85818175|gb|EAQ39335.1| undecaprenyl pyrophosphate synthetase [Dokdonia donghaensis MED134]
Length = 246
Score = 294 bits (753), Expect = 6e-78, Method: Composition-based stats.
Identities = 102/241 (42%), Positives = 152/241 (63%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+A + + P H+ IIMDGNGRWA +GL R GH+KG + E V AAAE+GI +LT++
Sbjct: 4 LAHIDKNKLPQHVAIIMDGNGRWAKKQGLLRAVGHKKGTKAVREAVEAAAELGIPHLTLY 63
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP +E+ L+ L+ S LKK +L+ N++ + IG SL L E
Sbjct: 64 AFSTENWNRPKAEVDTLMNLLVSSLKKEISTLQDNDVALNTIGLTSSLPKKAQRELNEVI 123
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T+ N L L +A +Y SR+E+ + ++ I +++ + ++D S I ++L T D+PD
Sbjct: 124 EKTKDNKRLKLTLALSYGSREELIKTVREISDKVKNNLISPAEIDESCINQHLYTYDIPD 183
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRT GE+R+S+FLLWQ+AY+EF F WPDF +E A+ Y R+RRFG S+
Sbjct: 184 VDLLIRTSGEQRVSNFLLWQIAYAEFYFTEVLWPDFRKEHLHDAIYNYQKRERRFGKTSE 243
Query: 242 K 242
+
Sbjct: 244 Q 244
>gi|325859894|ref|ZP_08173024.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella denticola
CRIS 18C-A]
gi|325482820|gb|EGC85823.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella denticola
CRIS 18C-A]
Length = 250
Score = 294 bits (753), Expect = 6e-78, Method: Composition-based stats.
Identities = 98/245 (40%), Positives = 145/245 (59%), Gaps = 5/245 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
MV + + P HI IIMDGNGRWA R PR GH+ G+E I + +G+K LT+
Sbjct: 1 MVEELDMTRIPRHIAIIMDGNGRWATERNKPRSYGHQAGVETVRRITSECVRLGVKYLTL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW RP EI+ L+ L+ + L+ KNN++ RVIG+R L +++ L+E
Sbjct: 61 YTFSTENWNRPTDEIAALMGLVLTSLEDEI--FMKNNVRFRVIGDRERLPEEVQEKLRET 118
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSV---CSHDVDSSLIAKYLDTS 177
E T N + + +A +YS+R EI++A+K I + + + + L+ +++ T+
Sbjct: 119 EQHTEKNAAMTMVVALSYSARWEITQAMKEIVTEHQQENAVPLRPEMITEELLDRHMQTN 178
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+PDPDL+IRTGGE R+S++LLWQ+AYSE F YWPDFS A+ + R RRFG
Sbjct: 179 FMPDPDLLIRTGGELRISNYLLWQIAYSELYFCDTYWPDFSEHDLQKAITSFQSRQRRFG 238
Query: 238 GLSKK 242
K+
Sbjct: 239 KTEKQ 243
>gi|209695847|ref|YP_002263777.1| undecaprenyl pyrophosphate synthetase [Aliivibrio salmonicida
LFI1238]
gi|208009800|emb|CAQ80107.1| undecaprenyl pyrophosphate synthetase [Aliivibrio salmonicida
LFI1238]
Length = 257
Score = 294 bits (753), Expect = 6e-78, Method: Composition-based stats.
Identities = 101/233 (43%), Positives = 155/233 (66%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI +IMDGNGRWA A+G PR GH+ G++ + ++AA+++GI +T+FAFS NWR
Sbjct: 15 LPKHIAVIMDGNGRWAKAQGKPRVFGHKAGVDAVRKTISAASKLGINAITLFAFSSENWR 74
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+S L++L + L + L KNNI++RVIGN + + EAE T N+G
Sbjct: 75 RPEEEVSVLMELFITVLSREVKRLHKNNIQLRVIGNTSQFSSRLQKKILEAEALTLENSG 134
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L IA NY + +I++A++ + +E G++ + +++ +LIA L SD+PD DL+IRT
Sbjct: 135 LVLNIAANYGGKWDITQAVQRLAYQVEQGNLQADNINEALIASKLTMSDLPDVDLMIRTS 194
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE R+S+F+LWQ+AY+EF F +YWPDF+ + +A+ + R+RRFG ++
Sbjct: 195 GECRISNFMLWQMAYAEFYFTDQYWPDFNEQSLANAVAWFVSRERRFGCTGEQ 247
>gi|17230924|ref|NP_487472.1| undecaprenyl pyrophosphate synthetase [Nostoc sp. PCC 7120]
gi|42560000|sp|Q8YRL4|UPPS2_ANASP RecName: Full=Undecaprenyl pyrophosphate synthase 2; Short=UPP
synthase 2; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase 2;
AltName: Full=Undecaprenyl diphosphate synthase 2;
Short=UDS 2
gi|17132565|dbj|BAB75131.1| undecaprenyl pyrophosphate synthetase [Nostoc sp. PCC 7120]
Length = 258
Score = 294 bits (753), Expect = 6e-78, Method: Composition-based stats.
Identities = 94/237 (39%), Positives = 144/237 (60%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P HI +IMDGNGRWA +RGLPR AGHR+G E++ + GIK LT +AFS
Sbjct: 18 LDPQKIPQHIAVIMDGNGRWATSRGLPRIAGHRQGARTLKELLRCCKDWGIKALTAYAFS 77
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP+ E+ L+ L + L++ + + +++ IG+ +L + ++ + +T
Sbjct: 78 TENWQRPIEEVDFLMLLFERLLRRELSQMHREGVRISFIGDLTALPKSLQTEMERSMTET 137
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N ++ +A NY SR+EI+RA + + + ++ G + + V+ ++ ++L T+D PDL
Sbjct: 138 LNNQAIHFTVAVNYGSRNEITRACRQVAELVQQGKLSADAVNEGIVEQHLYTTDTQPPDL 197
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
+IRT GE RLS+FLLWQ+AY+E F WPDF RE F AL Y RDRRFG +
Sbjct: 198 LIRTSGEMRLSNFLLWQMAYTEMYFTDILWPDFDREAFHQALLSYQKRDRRFGQVKA 254
>gi|189404567|ref|ZP_02790300.2| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC4501]
gi|189364913|gb|EDU83329.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
O157:H7 str. EC4501]
Length = 281
Score = 294 bits (753), Expect = 6e-78, Method: Composition-based stats.
Identities = 91/239 (38%), Positives = 142/239 (59%), Gaps = 4/239 (1%)
Query: 6 MSSSPP----DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+S P H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++
Sbjct: 37 LSEKLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY 96
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+S L++L L SL ++N+++R+IG+ + + ++++E
Sbjct: 97 AFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSE 156
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T NTGL L IA NY R +I + ++ + + ++ G++ +D ++ +++ ++
Sbjct: 157 ALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAP 216
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRTGGE R+S+FLLWQ+AY+E F WPDF + F ALN + R+RRFGG
Sbjct: 217 VDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGGTE 275
>gi|315172519|gb|EFU16536.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX1346]
Length = 271
Score = 294 bits (753), Expect = 6e-78, Method: Composition-based stats.
Identities = 100/240 (41%), Positives = 143/240 (59%), Gaps = 4/240 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
P HI IIMDGNGRWA R LPR AGH++G++ +I A+ +G+K LT++AFS
Sbjct: 22 KEGQIPQHIAIIMDGNGRWAQNRRLPRIAGHKEGMDTVKKITKHASHLGVKVLTLYAFST 81
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP E++ L++L F L K N+KV V+G + L +K A +QT+
Sbjct: 82 ENWKRPTDEVNFLMQLPVDFFDTFVPELIKENVKVNVMGYQEFLPSHTQDAVKRAIEQTK 141
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----D 181
NTG+ L A NY +R E+ A+K I + + + ++ IA +L T +P D
Sbjct: 142 DNTGMVLNFALNYGARAELLTAMKQIAAKVSEKAYTADEITEETIADHLMTGFLPTELRD 201
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
P+L+IRT GE+R+S+FLLWQ+AYSE F WPDFS + A+ + R+RRFGGL +
Sbjct: 202 PELLIRTSGEERISNFLLWQIAYSELFFTKALWPDFSGDTLETAIASFQNRNRRFGGLKE 261
>gi|220910055|ref|YP_002485366.1| undecaprenyl pyrophosphate synthase [Cyanothece sp. PCC 7425]
gi|219866666|gb|ACL47005.1| undecaprenyl diphosphate synthase [Cyanothece sp. PCC 7425]
Length = 249
Score = 294 bits (753), Expect = 7e-78, Method: Composition-based stats.
Identities = 91/239 (38%), Positives = 141/239 (58%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + P H+ +IMDGNGRWA +GLPR GHR+G++ E++ + GI+ LT
Sbjct: 11 LPTDLDAQRLPRHVAVIMDGNGRWAKRQGLPRILGHRRGVDALKELLRCCKDWGIEALTA 70
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP++E+ L+ L + L++ L + +++ +G+ SL + ++ A
Sbjct: 71 YAFSTENWGRPLAEVEFLMTLFERVLRRELEELIQEGVQIHFVGDLDSLPASLQEEIERA 130
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
T+ N + +A NY R EI +A + I Q+++ G + D+D L ++L T+ +
Sbjct: 131 VTATQANQTIRFVVATNYGGRREILQACRAIAQEVKQGQLQVEDIDEGLFERHLYTAGMG 190
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRT GE R+S+FLLWQ+AYSE WPDF R F AL+ + R RRFG L
Sbjct: 191 DPDLLIRTSGEMRISNFLLWQLAYSELYVTETLWPDFDRAEFHRALSDFQHRHRRFGRL 249
>gi|291542737|emb|CBL15847.1| Undecaprenyl pyrophosphate synthetase [Ruminococcus bromii L2-63]
Length = 248
Score = 294 bits (753), Expect = 7e-78, Method: Composition-based stats.
Identities = 109/231 (47%), Positives = 156/231 (67%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P HIGIIMDGNGRWA RGLPR AGHR+G + F I +++GIK LT++AFS NW
Sbjct: 18 NLPSHIGIIMDGNGRWAKKRGLPRKAGHRQGAKTFRTITRYCSDIGIKYLTVYAFSTENW 77
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP E+ L+ L KS+L + K ++I V+ IG++ +D++ ++ E E+ ++
Sbjct: 78 KRPQEEVDALMSLFKSYLNEALEDFKDDSIVVKFIGDKSGFNDELRELMIENEESSKDRD 137
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
G+ L IA NY SRDEI RA++NI +D+ +G + S D+ +L + YL T+ PDPDLIIR
Sbjct: 138 GMVLNIAMNYGSRDEIVRAVRNISEDVRNGKISSDDITENLFSNYLYTAGQPDPDLIIRP 197
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE R+S+FLLWQ AY+EFV + + WPDF + AL Y+ R+RR+GG+
Sbjct: 198 SGEYRISNFLLWQSAYTEFVIMNKLWPDFQKSDLDEALKIYSSRNRRYGGV 248
>gi|323157989|gb|EFZ44091.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
EPECa14]
gi|323176488|gb|EFZ62080.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli 1180]
Length = 252
Score = 294 bits (753), Expect = 7e-78, Method: Composition-based stats.
Identities = 90/239 (37%), Positives = 142/239 (59%), Gaps = 4/239 (1%)
Query: 6 MSSSPP----DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+S P H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++
Sbjct: 8 LSEKLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY 67
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+S L++L L SL ++N+++R+IG+ + + ++++E
Sbjct: 68 AFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSE 127
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T N+GL L IA NY R +I + ++ + + ++ G++ +D ++ +++ ++
Sbjct: 128 ALTAGNSGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAP 187
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRTGGE R+S+FLLWQ+AY+E F WPDF + F ALN + R+RRFGG
Sbjct: 188 VDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGGTE 246
>gi|254719220|ref|ZP_05181031.1| undecaprenyl diphosphate synthase [Brucella sp. 83/13]
gi|265984215|ref|ZP_06096950.1| undecaprenyl pyrophosphate synthetase [Brucella sp. 83/13]
gi|306837969|ref|ZP_07470827.1| undecaprenyl diphosphate synthase [Brucella sp. NF 2653]
gi|264662807|gb|EEZ33068.1| undecaprenyl pyrophosphate synthetase [Brucella sp. 83/13]
gi|306406893|gb|EFM63114.1| undecaprenyl diphosphate synthase [Brucella sp. NF 2653]
Length = 254
Score = 294 bits (753), Expect = 7e-78, Method: Composition-based stats.
Identities = 123/233 (52%), Positives = 161/233 (69%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA ARGLPR AGHR G+E EIV AA + G+ LT+FAFS NW R
Sbjct: 4 PRHIAIIMDGNGRWAKARGLPRSAGHRAGVETLREIVRAAGDRGLGYLTLFAFSSENWTR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S+L+ L+K F+++ L +NN++V +IG R L DI +L EAE T NTGL
Sbjct: 64 PSGEVSDLLGLLKLFIRRDLAELHRNNVRVNIIGERAELAADIRALLNEAESLTHRNTGL 123
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL IAFNY SRDEI RA++++ +D+ +G + + + L++ LDT+ +PDPDLIIRT G
Sbjct: 124 NLVIAFNYGSRDEIVRAVRSLARDVAAGLLDPSSISAELVSANLDTAGIPDPDLIIRTSG 183
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
E RLS+FLLWQ AYSEF+F+P +WPDF A + R+RRFGG+ +
Sbjct: 184 EMRLSNFLLWQAAYSEFLFLPCHWPDFRPADLDAAYETFRQRERRFGGVEPRA 236
>gi|115524564|ref|YP_781475.1| undecaprenyl diphosphate synthase [Rhodopseudomonas palustris
BisA53]
gi|115518511|gb|ABJ06495.1| Undecaprenyl pyrophosphate synthetase [Rhodopseudomonas palustris
BisA53]
Length = 252
Score = 294 bits (753), Expect = 7e-78, Method: Composition-based stats.
Identities = 119/236 (50%), Positives = 162/236 (68%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
SS PP H+ IIMDGNGRWA ARGLPR GHR+G++ +V A+ E+GI LTIF+FS
Sbjct: 14 SSEPPLHVAIIMDGNGRWAKARGLPRAEGHRRGVDALRRVVRASGELGILYLTIFSFSSE 73
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP SEI++L L++ F++ +L ++ ++VRVIG R L+ D+ +L EAE+ TR
Sbjct: 74 NWSRPASEITDLFGLLRRFIRNDLANLHRDGVRVRVIGERDGLEPDLCALLTEAEELTRN 133
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NT L+L +AFNY SR EI+ A + + ++ G + + YLD D+PDPDLII
Sbjct: 134 NTKLHLVVAFNYGSRKEIANAAQRLAIEVAEGKRDPASITPEALGGYLDAPDIPDPDLII 193
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE+RLS+FL+WQ AYSE VF+P +WPDF R A+ +Y+ R+RRFGGL+ K
Sbjct: 194 RTSGEQRLSNFLMWQAAYSELVFVPIHWPDFDRAALESAIAEYSRRERRFGGLAAK 249
>gi|312864055|ref|ZP_07724291.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
vestibularis F0396]
gi|311100468|gb|EFQ58675.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
vestibularis F0396]
Length = 249
Score = 294 bits (753), Expect = 7e-78, Method: Composition-based stats.
Identities = 105/235 (44%), Positives = 147/235 (62%), Gaps = 4/235 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P+HIGIIMDGNGRWA R PR GH+ G++ ++ A+++G+K LT++AFS NW
Sbjct: 15 NIPNHIGIIMDGNGRWAKKRLQPRVMGHKAGMDSLQKVTIEASQLGVKVLTVYAFSTENW 74
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+ ++ L F K L KNN+++ IG+ L + L L++A +QT+ N+
Sbjct: 75 SRPQDEVKFIMNLPVEFFNKYVPELDKNNVRILTIGDNSRLPKETLDALEKAVEQTKHNS 134
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDL 184
GL L A NY R EI A++ I +++E+G + +D LIAK+L T +P DPDL
Sbjct: 135 GLILNFALNYGGRAEIVSAVQAIAKEVEAGKLSPEAIDEDLIAKHLMTDKLPYLYRDPDL 194
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IIRT GE RLS+FL WQ AYSE F +WPDF + A++ YN R RRFGG+
Sbjct: 195 IIRTSGELRLSNFLPWQSAYSELYFTDVFWPDFDHQGLRQAISDYNKRHRRFGGV 249
>gi|282877123|ref|ZP_06285965.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella buccalis
ATCC 35310]
gi|281300805|gb|EFA93132.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella buccalis
ATCC 35310]
Length = 259
Score = 294 bits (753), Expect = 8e-78, Method: Composition-based stats.
Identities = 103/242 (42%), Positives = 151/242 (62%), Gaps = 2/242 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + P H+ IIMDGNGRWAA RG R GH+ G+E I + +G+K LT+
Sbjct: 7 MNNELDMKRIPTHVAIIMDGNGRWAAERGKERSFGHQAGVETVRRITSECVRLGVKYLTL 66
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW RP E+S L+ L+ S L+ KNN++ RVIG+ L +++ L+E
Sbjct: 67 YTFSTENWNRPEDEVSALMGLVLSSLEDEI--FMKNNVRFRVIGDVKRLPENVRAKLQET 124
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E+ T N+ + + +A +YS+R E++ A++NI D+++G V + DV+ L+ + L+TS +P
Sbjct: 125 EEHTAANSAMTMVVALSYSARWEMTHALQNIVADVQAGRVHADDVNEELVGQRLETSFMP 184
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRTGGE R+S+FLLWQ+AYSE F YWPDF+ A+ Y R RRFG
Sbjct: 185 DPDLLIRTGGELRVSNFLLWQIAYSELYFCDTYWPDFNEADLHRAIMDYQGRQRRFGKTE 244
Query: 241 KK 242
++
Sbjct: 245 RQ 246
>gi|194435427|ref|ZP_03067609.1| di-trans,poly-cis-decaprenylcistransferase [Shigella dysenteriae
1012]
gi|194416330|gb|EDX32517.1| di-trans,poly-cis-decaprenylcistransferase [Shigella dysenteriae
1012]
Length = 253
Score = 294 bits (753), Expect = 8e-78, Method: Composition-based stats.
Identities = 91/239 (38%), Positives = 142/239 (59%), Gaps = 4/239 (1%)
Query: 6 MSSSPP----DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+S P H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++
Sbjct: 9 LSEKLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY 68
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+S L++L L SL ++N+++R+IG+ + + ++++E
Sbjct: 69 AFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSE 128
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T NTGL L IA NY R +I + ++ + + ++ G++ +D ++ +++ ++
Sbjct: 129 ALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAP 188
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRTGGE R+S+FLLWQ+AY+E F WPDF + F ALN + R+RRFGG
Sbjct: 189 VDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGGTE 247
>gi|256113718|ref|ZP_05454522.1| undecaprenyl diphosphate synthase [Brucella melitensis bv. 3 str.
Ether]
gi|265995073|ref|ZP_06107630.1| undecaprenyl pyrophosphate synthetase [Brucella melitensis bv. 3
str. Ether]
gi|262766186|gb|EEZ11975.1| undecaprenyl pyrophosphate synthetase [Brucella melitensis bv. 3
str. Ether]
Length = 254
Score = 294 bits (753), Expect = 8e-78, Method: Composition-based stats.
Identities = 122/233 (52%), Positives = 162/233 (69%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA ARGLPR AGHR G+E EIV AA + G+ LT+FAFS NW R
Sbjct: 4 PRHIAIIMDGNGRWAKARGLPRSAGHRAGVEALREIVRAAGDRGLGYLTLFAFSSENWTR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S+L+ L+K F+++ L +NN++V +IG R L +I +L EAE T+ NTGL
Sbjct: 64 PSGEVSDLLGLLKLFIRRDLAELHRNNVRVNIIGERAELAANIRALLNEAESLTQRNTGL 123
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL IAFNY SRDEI RA++++ +D+ +G + + + L++ LDT+ +PDPDLIIRT G
Sbjct: 124 NLVIAFNYGSRDEIVRAVRSLARDVAAGLLDPSSISAELVSANLDTAGIPDPDLIIRTSG 183
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
E RLS+FLLWQ AYSEF+F+P +WPDF A + R+RRFGG+ +
Sbjct: 184 EMRLSNFLLWQAAYSEFLFLPCHWPDFRPADLDAAYETFRQRERRFGGVEPRA 236
>gi|300775252|ref|ZP_07085114.1| Di-trans,poly-cis-decaprenylcistransferase [Chryseobacterium gleum
ATCC 35910]
gi|300505992|gb|EFK37128.1| Di-trans,poly-cis-decaprenylcistransferase [Chryseobacterium gleum
ATCC 35910]
Length = 252
Score = 294 bits (753), Expect = 8e-78, Method: Composition-based stats.
Identities = 92/239 (38%), Positives = 139/239 (58%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ S + P H+ IIMDGNGRWA +RG R GH+ I + A E+ I LT++ F
Sbjct: 10 KINSENLPKHVAIIMDGNGRWAKSRGEERTFGHKNAINAVRNAINACNEINIPYLTLYTF 69
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP E++ L+ L+ L + +++ VIGN L + L+ +
Sbjct: 70 SSENWSRPAEEVNTLMNLLVETLLLEAEEIFSKGLRMHVIGNLDKLPPLVREQLERVVEL 129
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NT NL +A +Y S++EI A+KNI D++ G V +++ SL YL T D P D
Sbjct: 130 TKENTKGNLVLAISYGSQNEILEAVKNISSDVKEGKVEIENINESLFESYLYTKDFPPVD 189
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRT GE R+S+FLLWQ+AY+E F+ WPDF++++FF + Y ++RR+G ++
Sbjct: 190 LLIRTSGEIRISNFLLWQIAYAELQFLNVLWPDFTKDIFFQCIVDYQNKERRYGLTGEQ 248
>gi|163843422|ref|YP_001627826.1| undecaprenyl diphosphate synthase [Brucella suis ATCC 23445]
gi|225627626|ref|ZP_03785663.1| undecaprenyl diphosphate synthase [Brucella ceti str. Cudo]
gi|254701899|ref|ZP_05163727.1| undecaprenyl diphosphate synthase [Brucella suis bv. 5 str. 513]
gi|254706660|ref|ZP_05168488.1| undecaprenyl diphosphate synthase [Brucella pinnipedialis
M163/99/10]
gi|254710232|ref|ZP_05172043.1| undecaprenyl diphosphate synthase [Brucella pinnipedialis B2/94]
gi|254714228|ref|ZP_05176039.1| undecaprenyl diphosphate synthase [Brucella ceti M644/93/1]
gi|254717664|ref|ZP_05179475.1| undecaprenyl diphosphate synthase [Brucella ceti M13/05/1]
gi|256031726|ref|ZP_05445340.1| undecaprenyl diphosphate synthase [Brucella pinnipedialis
M292/94/1]
gi|256061239|ref|ZP_05451390.1| undecaprenyl diphosphate synthase [Brucella neotomae 5K33]
gi|256159892|ref|ZP_05457614.1| undecaprenyl diphosphate synthase [Brucella ceti M490/95/1]
gi|256255126|ref|ZP_05460662.1| undecaprenyl diphosphate synthase [Brucella ceti B1/94]
gi|256369583|ref|YP_003107093.1| undecaprenyl diphosphate synthase [Brucella microti CCM 4915]
gi|260168859|ref|ZP_05755670.1| undecaprenyl diphosphate synthase [Brucella sp. F5/99]
gi|261219505|ref|ZP_05933786.1| undecaprenyl pyrophosphate synthetase [Brucella ceti M13/05/1]
gi|261222324|ref|ZP_05936605.1| undecaprenyl pyrophosphate synthetase [Brucella ceti B1/94]
gi|261314120|ref|ZP_05953317.1| undecaprenyl pyrophosphate synthetase [Brucella pinnipedialis
M163/99/10]
gi|261317791|ref|ZP_05956988.1| undecaprenyl pyrophosphate synthetase [Brucella pinnipedialis
B2/94]
gi|261322000|ref|ZP_05961197.1| undecaprenyl pyrophosphate synthetase [Brucella ceti M644/93/1]
gi|261325247|ref|ZP_05964444.1| undecaprenyl pyrophosphate synthetase [Brucella neotomae 5K33]
gi|261752463|ref|ZP_05996172.1| undecaprenyl pyrophosphate synthetase [Brucella suis bv. 5 str.
513]
gi|261758347|ref|ZP_06002056.1| undecaprenyl pyrophosphate synthetase [Brucella sp. F5/99]
gi|265988822|ref|ZP_06101379.1| undecaprenyl pyrophosphate synthetase [Brucella pinnipedialis
M292/94/1]
gi|265998288|ref|ZP_06110845.1| undecaprenyl pyrophosphate synthetase [Brucella ceti M490/95/1]
gi|163674145|gb|ABY38256.1| undecaprenyl diphosphate synthase [Brucella suis ATCC 23445]
gi|225617631|gb|EEH14676.1| undecaprenyl diphosphate synthase [Brucella ceti str. Cudo]
gi|255999745|gb|ACU48144.1| undecaprenyl diphosphate synthase [Brucella microti CCM 4915]
gi|260920908|gb|EEX87561.1| undecaprenyl pyrophosphate synthetase [Brucella ceti B1/94]
gi|260924594|gb|EEX91162.1| undecaprenyl pyrophosphate synthetase [Brucella ceti M13/05/1]
gi|261294690|gb|EEX98186.1| undecaprenyl pyrophosphate synthetase [Brucella ceti M644/93/1]
gi|261297014|gb|EEY00511.1| undecaprenyl pyrophosphate synthetase [Brucella pinnipedialis
B2/94]
gi|261301227|gb|EEY04724.1| undecaprenyl pyrophosphate synthetase [Brucella neotomae 5K33]
gi|261303146|gb|EEY06643.1| undecaprenyl pyrophosphate synthetase [Brucella pinnipedialis
M163/99/10]
gi|261738331|gb|EEY26327.1| undecaprenyl pyrophosphate synthetase [Brucella sp. F5/99]
gi|261742216|gb|EEY30142.1| undecaprenyl pyrophosphate synthetase [Brucella suis bv. 5 str.
513]
gi|262552756|gb|EEZ08746.1| undecaprenyl pyrophosphate synthetase [Brucella ceti M490/95/1]
gi|264661019|gb|EEZ31280.1| undecaprenyl pyrophosphate synthetase [Brucella pinnipedialis
M292/94/1]
Length = 254
Score = 294 bits (753), Expect = 8e-78, Method: Composition-based stats.
Identities = 123/233 (52%), Positives = 161/233 (69%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA ARGLPR AGHR G+E EIV AA + G+ LT+FAFS NW R
Sbjct: 4 PRHIAIIMDGNGRWAKARGLPRSAGHRAGVEALREIVRAAGDRGLGYLTLFAFSSENWTR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S+L+ L+K F+++ L +NN++V +IG R L DI +L EAE T NTGL
Sbjct: 64 PSGEVSDLLGLLKLFIRRDLAELHRNNVRVNIIGERAELAADIRALLNEAESLTHRNTGL 123
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL IAFNY SRDEI RA++++ +D+ +G + + + L++ LDT+ +PDPDLIIRT G
Sbjct: 124 NLVIAFNYGSRDEIVRAVRSLARDVAAGLLDPSSISAELVSANLDTAGIPDPDLIIRTSG 183
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
E RLS+FLLWQ AYSEF+F+P +WPDF A + R+RRFGG+ +
Sbjct: 184 EMRLSNFLLWQAAYSEFLFLPCHWPDFRPADLDAAYETFRQRERRFGGVEPRA 236
>gi|302874653|ref|YP_003843286.1| undecaprenyl diphosphate synthase [Clostridium cellulovorans 743B]
gi|307690734|ref|ZP_07633180.1| undecaprenyl diphosphate synthase [Clostridium cellulovorans 743B]
gi|302577510|gb|ADL51522.1| undecaprenyl diphosphate synthase [Clostridium cellulovorans 743B]
Length = 252
Score = 294 bits (753), Expect = 8e-78, Method: Composition-based stats.
Identities = 108/238 (45%), Positives = 151/238 (63%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P+HI IIMDGNGRWA + LPR AGH+ G E EI +++G+K LT++AF
Sbjct: 15 ELDMDKIPEHIAIIMDGNGRWAQGKKLPRSAGHKAGAENVREITKECSKLGVKYLTLYAF 74
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E++ L+KL+ FL K L +N + VR +G+ L ++ L+EA ++
Sbjct: 75 STENWKRSNEEVNILMKLMVEFLNKEIDELHENQVVVRCLGDITKLPEECRKTLEEAYER 134
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NTG+NL +A NY RDEI +A++ I +D+ +D + KYL T+ +PDPD
Sbjct: 135 TKDNTGINLNLAINYGGRDEILKAVRLIAKDVLESKSNIETLDIGDVEKYLYTAGMPDPD 194
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
LIIR GEKR+S+FLLWQ AYSEF + WPDF+R A+ Y RDRRFGG++K
Sbjct: 195 LIIRPSGEKRISNFLLWQCAYSEFWYSNINWPDFNRNNLQEAILDYQDRDRRFGGINK 252
>gi|332976810|gb|EGK13638.1| di-trans,poly-cis-decaprenylcistransferase [Desmospora sp. 8437]
Length = 272
Score = 294 bits (752), Expect = 8e-78, Method: Composition-based stats.
Identities = 102/238 (42%), Positives = 148/238 (62%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ ++ P H+ IIMDGNGRWA +RG+PR AGHR G++ I AA ++GI+ LT++
Sbjct: 35 IHTLQKGPLPRHVAIIMDGNGRWAKSRGMPRVAGHRAGMKTVRHITRAADDLGIEALTLY 94
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
+FS NW+RP E++ L+ L FL+ L NI+VR++G L + + +
Sbjct: 95 SFSTENWKRPKEEVNYLMGLPGEFLRTDLDELVARNIQVRMLGEEDQLPGHTRDAILKFK 154
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ TR NTG+ L A NY SR E+ RA+ I D+ SG + VD L T+D+P+
Sbjct: 155 EATRDNTGMILSFALNYGSRAEMIRAMHGIIDDVISGKLEKETVDEDYFGSTLYTADLPE 214
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDL+IRT GE R+S+F+LWQ+AYSE F WPDF+RE+FF A++ + R RR+G +
Sbjct: 215 PDLMIRTSGEVRISNFMLWQLAYSELWFTDVLWPDFTREMFFEAIDDFQRRSRRYGAV 272
>gi|309775653|ref|ZP_07670652.1| di-trans,poly-cis-decaprenylcistransferase [Erysipelotrichaceae
bacterium 3_1_53]
gi|308916559|gb|EFP62300.1| di-trans,poly-cis-decaprenylcistransferase [Erysipelotrichaceae
bacterium 3_1_53]
Length = 242
Score = 294 bits (752), Expect = 8e-78, Method: Composition-based stats.
Identities = 106/235 (45%), Positives = 147/235 (62%), Gaps = 1/235 (0%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M + P HI IIMDGNGRWA RGLPR AGH++G E I A ++G+K LT +AFS
Sbjct: 9 MDTRIIPQHIAIIMDGNGRWAKKRGLPRTAGHKQGAENIRRIAIACNDLGVKALTCYAFS 68
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+ L KL K F + LKKNNI+V +G ++ V+ A +T
Sbjct: 69 TENWKRPQDEVDYLCKLPKLFFNRYLAELKKNNIRVTFLGEIERFPEETRKVITSAVAET 128
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NTGL L +A NY +R EI+ A + QD+ S +D Y+ T+D+P+ DL
Sbjct: 129 KQNTGLILCLAVNYGARREITLAAQKYAQDV-LEGKASATIDEEAFGSYMMTADMPELDL 187
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE R+S+FLLWQ+AY+E +F P WP+F++E A++++N R+RRFGGL
Sbjct: 188 MIRTSGELRISNFLLWQLAYAELIFTPVAWPEFTKEELNRAIDEFNHRNRRFGGL 242
>gi|332982467|ref|YP_004463908.1| undecaprenyl diphosphate synthase [Mahella australiensis 50-1 BON]
gi|332700145|gb|AEE97086.1| undecaprenyl diphosphate synthase [Mahella australiensis 50-1 BON]
Length = 246
Score = 294 bits (752), Expect = 8e-78, Method: Composition-based stats.
Identities = 99/240 (41%), Positives = 146/240 (60%), Gaps = 1/240 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ ++ P H+ IIMDGNGRWA RGLPR GH+ G+EV +V ++++GIK LT+
Sbjct: 7 LFWAVDKDKLPVHVAIIMDGNGRWAKQRGLPRIMGHKAGMEVIRNVVKMSSKLGIKFLTL 66
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E++ L++L+ +L K L NN+K+ IG L L +
Sbjct: 67 YAFSTENWKRPGEEVNFLMRLLVEYLNKEVEELNTNNVKITSIGRISELPQVAYEQLVRS 126
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSH-DVDSSLIAKYLDTSDV 179
+ T NTGL L +A NY R EI A+ + DI++G + D++ + + YL T+ +
Sbjct: 127 MNYTAGNTGLTLNLALNYGGRIEILDAVNAVINDIKTGKLPVDADINQNTFSSYLYTASI 186
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDPDL+IRT GE+R+S+FLL+Q+AY+E F YWPDF + A+ Y R RR+G +
Sbjct: 187 PDPDLLIRTSGERRVSNFLLYQIAYTEMYFSDVYWPDFDDAEYLRAIMDYQNRHRRYGAI 246
>gi|300023425|ref|YP_003756036.1| undecaprenyl diphosphate synthase [Hyphomicrobium denitrificans
ATCC 51888]
gi|299525246|gb|ADJ23715.1| undecaprenyl diphosphate synthase [Hyphomicrobium denitrificans
ATCC 51888]
Length = 252
Score = 294 bits (752), Expect = 8e-78, Method: Composition-based stats.
Identities = 109/235 (46%), Positives = 156/235 (66%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+PP H+ IIMDGNGRWA RGLPR GHR+G+E V A E+ I LTIF+FS NW
Sbjct: 16 APPRHVAIIMDGNGRWAKERGLPRTLGHRQGVEAVRRAVRTAIELNITYLTIFSFSSENW 75
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP E+ +L+ L+K F+++ L + + +RVIG R +D ++ ++ +A T+ N
Sbjct: 76 KRPADEVDDLMGLMKRFIRRDLVELHEAGVCIRVIGQRQHVDSELTKLIDDAVALTKGND 135
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
L L IAFNY SR EI+ A + + ++ +G++ + +A LDTS +PDPDL+IRT
Sbjct: 136 RLTLVIAFNYGSRSEIAGAARKLAAEVAAGTLDPSAITVERMANALDTSGIPDPDLLIRT 195
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
GE RLS+FLLWQ AYSEFVF+ YWPDF + F A++++ R+RRFGGL+++
Sbjct: 196 SGEMRLSNFLLWQTAYSEFVFLDCYWPDFDKAAFEGAIHEFRSRERRFGGLTQRS 250
>gi|312869038|ref|ZP_07729215.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus oris
PB013-T2-3]
gi|311095464|gb|EFQ53731.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus oris
PB013-T2-3]
Length = 254
Score = 294 bits (752), Expect = 8e-78, Method: Composition-based stats.
Identities = 103/243 (42%), Positives = 153/243 (62%), Gaps = 3/243 (1%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
++ P HI IIMDGNGRWA R LPR AGH++G++ I AA+ +G+K LT++A
Sbjct: 12 MAIDMERIPHHIAIIMDGNGRWAQKRHLPRVAGHKQGMQTVKTITIAASNLGVKVLTLYA 71
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW+RP SE++ L++L F L KNN++V V+G+ L + +A
Sbjct: 72 FSTENWKRPSSEVNYLMQLPIRFFSTFVPDLVKNNVRVMVMGDIQRLPSKTQQAVNDAIA 131
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS---DV 179
T G+ L A NY SRDEI+RA++ + +++G++ +D L++++L T+ +
Sbjct: 132 DTANCDGMVLNFALNYGSRDEITRAVQEVAAVVQAGTISPEAIDEELVSQHLMTAPLGEF 191
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRT GE+R+S+FLLWQ+AYSE F+PE+WPDF E A+ ++ R RRFGGL
Sbjct: 192 ADPDLLIRTSGEERISNFLLWQLAYSELEFVPEHWPDFDAESLKRAIVEFQGRHRRFGGL 251
Query: 240 SKK 242
+
Sbjct: 252 KNE 254
>gi|23502036|ref|NP_698163.1| undecaprenyl pyrophosphate synthase [Brucella suis 1330]
gi|161619109|ref|YP_001592996.1| undecaprenyl diphosphate synthase [Brucella canis ATCC 23365]
gi|254704444|ref|ZP_05166272.1| undecaprenyl diphosphate synthase [Brucella suis bv. 3 str. 686]
gi|260566309|ref|ZP_05836779.1| undecaprenyl pyrophosphate synthetase [Brucella suis bv. 4 str. 40]
gi|261755122|ref|ZP_05998831.1| undecaprenyl pyrophosphate synthetase [Brucella suis bv. 3 str.
686]
gi|42559822|sp|Q8G0D9|UPPS_BRUSU RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|23347990|gb|AAN30078.1| undecaprenyl diphosphate synthase [Brucella suis 1330]
gi|161335920|gb|ABX62225.1| undecaprenyl diphosphate synthase [Brucella canis ATCC 23365]
gi|260155827|gb|EEW90907.1| undecaprenyl pyrophosphate synthetase [Brucella suis bv. 4 str. 40]
gi|261744875|gb|EEY32801.1| undecaprenyl pyrophosphate synthetase [Brucella suis bv. 3 str.
686]
Length = 254
Score = 294 bits (752), Expect = 8e-78, Method: Composition-based stats.
Identities = 123/233 (52%), Positives = 161/233 (69%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA ARGLPR AGHR G+E EIV AA + G+ LT+FAFS NW R
Sbjct: 4 PRHIAIIMDGNGRWAKARGLPRSAGHRAGVEALREIVRAAGDRGLGYLTLFAFSSENWTR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S+L+ L+K F+++ L +NN++V +IG R L DI +L EAE T NTGL
Sbjct: 64 PSGEVSDLLGLLKLFIRRDLAELHRNNVRVNIIGERAELAADIRALLNEAESLTHRNTGL 123
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL IAFNY SRDEI RA++++ +D+ +G + + + L++ LDT+ +PDPDLIIRT G
Sbjct: 124 NLVIAFNYGSRDEIVRAVRSLARDVAAGLLDPSSISAELVSANLDTAGIPDPDLIIRTSG 183
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
E RLS+FLLWQ AYSEF+F+P +WPDF A + R+RRFGG+ +
Sbjct: 184 EMRLSNFLLWQAAYSEFLFLPCHWPDFRPTDLDAAYETFRQRERRFGGVEPRA 236
>gi|307317017|ref|ZP_07596458.1| undecaprenyl diphosphate synthase [Sinorhizobium meliloti AK83]
gi|306897105|gb|EFN27850.1| undecaprenyl diphosphate synthase [Sinorhizobium meliloti AK83]
Length = 247
Score = 294 bits (752), Expect = 9e-78, Method: Composition-based stats.
Identities = 124/235 (52%), Positives = 175/235 (74%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
++ P H+ IIMDGNGRWA ARGLPR GHRKG+E V AAE+GI+ LT+FAFS
Sbjct: 6 PANVPAHVAIIMDGNGRWANARGLPRTMGHRKGVEAVRGAVRTAAEIGIRYLTLFAFSSE 65
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP +E+S+L+ L+K+F+++ L + N+++RVIG+R +L DIL +L EAE+ T
Sbjct: 66 NWNRPENEVSDLMGLLKAFIRRDLADLHRENVRIRVIGDRSNLSGDILPLLIEAEETTIA 125
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTG+ + IAFNY +RDE++RA++ + D+ +G + ++ + I+ +DT+ +PDPDLII
Sbjct: 126 NTGITVVIAFNYGARDELARAMRRLAGDVAAGRLRPEEITAERISSTIDTAGIPDPDLII 185
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
RT GE+RLS+FLLWQ AYSE +FIP+ WPDF+RE FF A+ QY R+RRFGGL++
Sbjct: 186 RTSGEERLSNFLLWQGAYSELLFIPDLWPDFTRETFFAAIEQYACRERRFGGLTQ 240
>gi|237734610|ref|ZP_04565091.1| undecaprenyl pyrophosphate synthetase [Mollicutes bacterium D7]
gi|229382430|gb|EEO32521.1| undecaprenyl pyrophosphate synthetase [Coprobacillus sp. D7]
Length = 251
Score = 294 bits (752), Expect = 9e-78, Method: Composition-based stats.
Identities = 94/236 (39%), Positives = 141/236 (59%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IMDGNGRWA R +PR GH +G + ++ ++G+K +T++AFS
Sbjct: 16 LDKDNIPQHIAFIMDGNGRWAKKRKMPRTYGHHEGTKTIRDVALHCNKLGVKAMTVYAFS 75
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
N+ RP E+ + KL K F + L +NN+K+ IG+ + ++ A D+T
Sbjct: 76 TENFARPEQEVQYIFKLPKDFFELYMKELIENNVKICTIGHLEMAPKETQDIINSAIDKT 135
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NTGL L AF Y RDEI A K + +++G + ++++ ++ L T D+P+ DL
Sbjct: 136 KNNTGLKLCFAFIYGGRDEILEATKKLAMKVKAGELGVNEINETVFNDELMTKDLPEVDL 195
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
+IRT GE+RLS+FLLWQ+AY+EF+F WPDF+ A+ Y RDRRFGGL
Sbjct: 196 MIRTSGEQRLSNFLLWQLAYAEFIFTDVLWPDFNENELDKAIWMYQNRDRRFGGLK 251
>gi|260853384|ref|YP_003227275.1| undecaprenyl pyrophosphate synthase [Escherichia coli O26:H11 str.
11368]
gi|260866323|ref|YP_003232725.1| undecaprenyl pyrophosphate synthase [Escherichia coli O111:H- str.
11128]
gi|257752033|dbj|BAI23535.1| undecaprenyl pyrophosphate synthase [Escherichia coli O26:H11 str.
11368]
gi|257762679|dbj|BAI34174.1| undecaprenyl pyrophosphate synthase [Escherichia coli O111:H- str.
11128]
Length = 253
Score = 294 bits (752), Expect = 9e-78, Method: Composition-based stats.
Identities = 90/239 (37%), Positives = 142/239 (59%), Gaps = 4/239 (1%)
Query: 6 MSSSPP----DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+S P H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++
Sbjct: 9 LSEKLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY 68
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+S L++L L SL ++N+++R+IG+ + + ++++E
Sbjct: 69 AFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSE 128
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T N+GL L IA NY R +I + ++ + + ++ G++ +D ++ +++ ++
Sbjct: 129 ALTAGNSGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAP 188
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRTGGE R+S+FLLWQ+AY+E F WPDF + F ALN + R+RRFGG
Sbjct: 189 VDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGGTE 247
>gi|196229590|ref|ZP_03128455.1| undecaprenyl diphosphate synthase [Chthoniobacter flavus Ellin428]
gi|196226822|gb|EDY21327.1| undecaprenyl diphosphate synthase [Chthoniobacter flavus Ellin428]
Length = 236
Score = 294 bits (752), Expect = 9e-78, Method: Composition-based stats.
Identities = 93/231 (40%), Positives = 143/231 (61%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ IIMDGNGRWA RGLPR GH +G E + A E+G++ LT++AFS NW
Sbjct: 6 PIPKHVAIIMDGNGRWAKERGLPRMKGHEQGAESVRAVTEACVELGVEYLTVYAFSTENW 65
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP +E++ L L++ F+++ +L KN ++++ IG L + L++ + T N
Sbjct: 66 KRPAAEVNALWTLLEHFIEQETPTLMKNGVRLQAIGRIHELPESCQTALRKTIELTANNP 125
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
L +A NYS R EI ++N+ ++ +G++ +D +++L T + PDPDL+IRT
Sbjct: 126 KTTLVLALNYSGRTEIIDTVRNLCREAAAGALDIESLDEKAFSRHLYTGNFPDPDLLIRT 185
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE RLS+FLLWQ++Y+E + WPDF +E A+ ++N R RRFGGL
Sbjct: 186 SGELRLSNFLLWQLSYTEIYVTQKMWPDFCKEDLRDAIREFNKRQRRFGGL 236
>gi|316933925|ref|YP_004108907.1| undecaprenyl diphosphate synthase [Rhodopseudomonas palustris DX-1]
gi|315601639|gb|ADU44174.1| undecaprenyl diphosphate synthase [Rhodopseudomonas palustris DX-1]
Length = 252
Score = 294 bits (752), Expect = 9e-78, Method: Composition-based stats.
Identities = 119/236 (50%), Positives = 166/236 (70%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
SS P H+ IIMDGNGRWAAARGLPR GHR+G+E +V A++E+GI+ LTIF+FS
Sbjct: 14 PSSAPAHVAIIMDGNGRWAAARGLPRAEGHRRGVEALRRVVRASSELGIQYLTIFSFSSE 73
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP +EI +L L++ F++ SL ++ +++RVIG R L D+ +L EA++ TR
Sbjct: 74 NWSRPATEIGDLFGLLRRFIRNDLASLHRDGVRIRVIGERNRLAPDLCQLLDEAQELTRN 133
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NT LNL +AFNY SR EI+ A + + +++ G +D + + +YLD D+PDPDLII
Sbjct: 134 NTKLNLVVAFNYGSRQEIANAAQRLAREVAEGKRDPESIDIATLGRYLDAPDIPDPDLII 193
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE+RLS+FL+WQ AYSE VF+P +WPDF + A+ +Y+ R+RRFGGL+ K
Sbjct: 194 RTSGEQRLSNFLMWQAAYSELVFVPIHWPDFDKAALEGAIAEYSRRERRFGGLAAK 249
>gi|116333951|ref|YP_795478.1| undecaprenyl pyrophosphate synthase [Lactobacillus brevis ATCC 367]
gi|116099298|gb|ABJ64447.1| Undecaprenyl pyrophosphate synthetase [Lactobacillus brevis ATCC
367]
Length = 262
Score = 294 bits (752), Expect = 9e-78, Method: Composition-based stats.
Identities = 105/240 (43%), Positives = 154/240 (64%), Gaps = 3/240 (1%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ ++ P HI IIMDGNGRWA R LPR AGH++G+ + AA+ +G+K LT++AF
Sbjct: 18 QLDEANIPAHIAIIMDGNGRWAQQRHLPRIAGHKQGMNTVKTVAKAASHLGVKVLTLYAF 77
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP +E++ L+KL F L KNNI+V+V+G L + +A
Sbjct: 78 STENWKRPNAEVNYLMKLPVDFFGTFVPDLIKNNIRVKVMGYTDQLPAATQKAVADAIAD 137
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD---VP 180
TR TG+ L A NY R E+ A++++ Q ++SG + ++D +++ + L T+D +
Sbjct: 138 TRHCTGMVLNFALNYGGRAELVTAVQHVAQQVQSGQLDPAEIDETMLDRQLMTADLGELR 197
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GEKRLS+F+LWQVAYSEFVF+ E+WPDF + A+ +Y R RR+GGL+
Sbjct: 198 DPDLLIRTSGEKRLSNFMLWQVAYSEFVFMQEHWPDFDQTALETAIYEYQQRHRRYGGLT 257
>gi|322373813|ref|ZP_08048348.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sp. C150]
gi|321277185|gb|EFX54255.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sp. C150]
Length = 249
Score = 294 bits (752), Expect = 9e-78, Method: Composition-based stats.
Identities = 107/235 (45%), Positives = 149/235 (63%), Gaps = 4/235 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P+HIGIIMDGNGRWA R PR GH+ G++ ++ A+++G+K LT++AFS NW
Sbjct: 15 KIPNHIGIIMDGNGRWAKKRLQPRVMGHKAGMDALQKVTIEASQLGVKVLTVYAFSTENW 74
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+ ++ L F K L KNN+++ IG+ L + L L++A +QT+ N+
Sbjct: 75 SRPQDEVKFIMNLPVEFFNKYVPELDKNNVRILTIGDNSRLPKETLEALEKAVEQTKHNS 134
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDL 184
GL L A NY R EI A++ I +++E+G + S +D LIAK+L T +P DPDL
Sbjct: 135 GLVLNFALNYGGRAEIVSAVQAIAKEVEAGKLSSEAIDEDLIAKHLMTDKLPYLYRDPDL 194
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IIRT GE RLS+FL WQ AYSEF F +WPDF ++ A++ YN R RRFGG+
Sbjct: 195 IIRTSGELRLSNFLPWQSAYSEFYFTDVFWPDFDQKGLRQAISDYNKRHRRFGGV 249
>gi|33861648|ref|NP_893209.1| undecaprenyl pyrophosphate synthetase [Prochlorococcus marinus
subsp. pastoris str. CCMP1986]
gi|42559765|sp|Q7V102|UPPS_PROMP RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|33634225|emb|CAE19551.1| Undecaprenyl pyrophosphate synthetase (UPPS) [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
Length = 272
Score = 294 bits (752), Expect = 9e-78, Method: Composition-based stats.
Identities = 100/234 (42%), Positives = 135/234 (57%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
P+HI IIMDGNGRWA +GLPR GH KG+ V EI+ A+ + K LT++AFS
Sbjct: 20 KERIPEHIAIIMDGNGRWATKKGLPRSFGHNKGVSVLKEIIKASKNIDCKVLTVYAFSTE 79
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP +E+ L+ L + LKK + + +IK++ IG+ L + + ++K +E T
Sbjct: 80 NWIRPSNEVDFLINLFEKVLKKEISEIHQESIKIKFIGDLSPLPNSLKLLIKSSEALTNN 139
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N L I NY R EI +A K I SG + D+D L L T DP+L+I
Sbjct: 140 NKKFTLNICVNYGGRQEIVKAAKEIAIKSSSGKIKPSDIDEQLFNSELLTKGSMDPELLI 199
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RT GEKR+S+FLLWQ+AYSE WPDF+ F A+ Y R+RRFGG+
Sbjct: 200 RTSGEKRISNFLLWQLAYSEIYVTDVLWPDFTESEFLKAIIDYQSRNRRFGGIE 253
>gi|86146885|ref|ZP_01065204.1| undecaprenyl diphosphate synthase [Vibrio sp. MED222]
gi|85835337|gb|EAQ53476.1| undecaprenyl diphosphate synthase [Vibrio sp. MED222]
Length = 250
Score = 294 bits (752), Expect = 9e-78, Method: Composition-based stats.
Identities = 99/236 (41%), Positives = 157/236 (66%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ S P HI IIMDGNGRWA A+G PR GH+ G++ + +++AA +GIK +T+FAFS
Sbjct: 8 TDSLPKHIAIIMDGNGRWAKAQGKPRVFGHKNGVQAVRKTISSAARLGIKAVTLFAFSSE 67
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+ L++L S L L KNN+++RVIG++ ++ + ++EAE T
Sbjct: 68 NWRRPEEEVGLLMELFISVLSSEVKKLHKNNLQLRVIGDKSRFNERLQKKIEEAEALTST 127
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTG+ + IA NY + +I +A+ +I Q ++SG + D+D ++I ++L +D+P+ DL+I
Sbjct: 128 NTGMVINIAANYGGKWDIQQAMTSIAQQVKSGDINVEDIDEAMITQHLTMADIPEVDLLI 187
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE R+S+F+LWQ+AY+E F ++WPDF+ + A+ + R+RRFG ++
Sbjct: 188 RTSGECRISNFMLWQLAYAEMYFTEQFWPDFNEDSLVEAVTWFVNRERRFGCTGEQ 243
>gi|294500907|ref|YP_003564607.1| undecaprenyl pyrophosphate synthetase [Bacillus megaterium QM
B1551]
gi|294350844|gb|ADE71173.1| undecaprenyl pyrophosphate synthetase [Bacillus megaterium QM
B1551]
Length = 260
Score = 294 bits (752), Expect = 9e-78, Method: Composition-based stats.
Identities = 103/236 (43%), Positives = 148/236 (62%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P+HI IIMDGNGRWA R LPR GH +G++V + A E+G+K LT++AF
Sbjct: 25 QVTQHPVPEHIAIIMDGNGRWAQKRALPRMMGHHEGMKVVRHVTRLANELGVKVLTLYAF 84
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP +E+ L+KL + FL L + N++VR++G++ L + + A ++
Sbjct: 85 STENWKRPKTEVEFLMKLPEEFLTTFLPELIEKNVQVRIMGDKSELPAHTIRAVDNAIEK 144
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NTGL L A NY SR EI AI+++ +D+E G V S + +L + YL + +PDPD
Sbjct: 145 TKHNTGLILNFALNYGSRHEIMGAIQSLVEDVEQGKVASSSISENLFSSYLMSKSLPDPD 204
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
L+IRT GE RLS+F+LWQ+AY+EF F WPDF A+ + R RRFGG+
Sbjct: 205 LLIRTSGELRLSNFMLWQLAYTEFWFTEVLWPDFKENHLIEAVEAFQKRGRRFGGV 260
>gi|17987110|ref|NP_539744.1| undecaprenyl pyrophosphate synthase [Brucella melitensis bv. 1 str.
16M]
gi|62290071|ref|YP_221864.1| undecaprenyl pyrophosphate synthase [Brucella abortus bv. 1 str.
9-941]
gi|82699997|ref|YP_414571.1| undecaprenyl pyrophosphate synthase [Brucella melitensis biovar
Abortus 2308]
gi|148559779|ref|YP_001259076.1| undecaprenyl pyrophosphate synthase [Brucella ovis ATCC 25840]
gi|189024310|ref|YP_001935078.1| undecaprenyl pyrophosphate synthase [Brucella abortus S19]
gi|225852655|ref|YP_002732888.1| undecaprenyl pyrophosphate synthase [Brucella melitensis ATCC
23457]
gi|237815577|ref|ZP_04594574.1| undecaprenyl diphosphate synthase [Brucella abortus str. 2308 A]
gi|254689381|ref|ZP_05152635.1| undecaprenyl diphosphate synthase [Brucella abortus bv. 6 str. 870]
gi|254693865|ref|ZP_05155693.1| undecaprenyl diphosphate synthase [Brucella abortus bv. 3 str.
Tulya]
gi|254697516|ref|ZP_05159344.1| undecaprenyl diphosphate synthase [Brucella abortus bv. 2 str.
86/8/59]
gi|254730411|ref|ZP_05188989.1| undecaprenyl diphosphate synthase [Brucella abortus bv. 4 str. 292]
gi|256044813|ref|ZP_05447717.1| undecaprenyl diphosphate synthase [Brucella melitensis bv. 1 str.
Rev.1]
gi|256257627|ref|ZP_05463163.1| undecaprenyl diphosphate synthase [Brucella abortus bv. 9 str. C68]
gi|256263851|ref|ZP_05466383.1| undecaprenyl pyrophosphate synthetase [Brucella melitensis bv. 2
str. 63/9]
gi|260546621|ref|ZP_05822360.1| undecaprenyl pyrophosphate synthetase [Brucella abortus NCTC 8038]
gi|260565587|ref|ZP_05836071.1| undecaprenyl pyrophosphate synthetase [Brucella melitensis bv. 1
str. 16M]
gi|260754899|ref|ZP_05867247.1| undecaprenyl diphosphate synthase [Brucella abortus bv. 6 str. 870]
gi|260758116|ref|ZP_05870464.1| undecaprenyl diphosphate synthase [Brucella abortus bv. 4 str. 292]
gi|260761942|ref|ZP_05874285.1| undecaprenyl diphosphate synthase [Brucella abortus bv. 2 str.
86/8/59]
gi|260883911|ref|ZP_05895525.1| undecaprenyl pyrophosphate synthetase [Brucella abortus bv. 9 str.
C68]
gi|261214151|ref|ZP_05928432.1| undecaprenyl diphosphate synthase [Brucella abortus bv. 3 str.
Tulya]
gi|265991237|ref|ZP_06103794.1| undecaprenyl pyrophosphate synthetase [Brucella melitensis bv. 1
str. Rev.1]
gi|42559851|sp|Q8YHH3|UPPS_BRUME RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|73920255|sp|Q57CY1|UPPS_BRUAB RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|17982771|gb|AAL52008.1| undecaprenyl pyrophosphate synthetase [Brucella melitensis bv. 1
str. 16M]
gi|62196203|gb|AAX74503.1| UppS, undecaprenyl diphosphate synthase [Brucella abortus bv. 1
str. 9-941]
gi|82616098|emb|CAJ11136.1| RNA-binding region RNP-1 (RNA recognition
motif):Di-trans-poly-cis-decaprenylcistransferase
[Brucella melitensis biovar Abortus 2308]
gi|148371036|gb|ABQ61015.1| undecaprenyl diphosphate synthase [Brucella ovis ATCC 25840]
gi|189019882|gb|ACD72604.1| Di-trans-poly-cis-decaprenylcistransferase [Brucella abortus S19]
gi|225641020|gb|ACO00934.1| undecaprenyl diphosphate synthase [Brucella melitensis ATCC 23457]
gi|237788875|gb|EEP63086.1| undecaprenyl diphosphate synthase [Brucella abortus str. 2308 A]
gi|260095671|gb|EEW79548.1| undecaprenyl pyrophosphate synthetase [Brucella abortus NCTC 8038]
gi|260151655|gb|EEW86749.1| undecaprenyl pyrophosphate synthetase [Brucella melitensis bv. 1
str. 16M]
gi|260668434|gb|EEX55374.1| undecaprenyl diphosphate synthase [Brucella abortus bv. 4 str. 292]
gi|260672374|gb|EEX59195.1| undecaprenyl diphosphate synthase [Brucella abortus bv. 2 str.
86/8/59]
gi|260675007|gb|EEX61828.1| undecaprenyl diphosphate synthase [Brucella abortus bv. 6 str. 870]
gi|260873439|gb|EEX80508.1| undecaprenyl pyrophosphate synthetase [Brucella abortus bv. 9 str.
C68]
gi|260915758|gb|EEX82619.1| undecaprenyl diphosphate synthase [Brucella abortus bv. 3 str.
Tulya]
gi|263002021|gb|EEZ14596.1| undecaprenyl pyrophosphate synthetase [Brucella melitensis bv. 1
str. Rev.1]
gi|263093982|gb|EEZ17916.1| undecaprenyl pyrophosphate synthetase [Brucella melitensis bv. 2
str. 63/9]
gi|326409176|gb|ADZ66241.1| Di-trans-poly-cis-decaprenylcistransferase [Brucella melitensis
M28]
gi|326538886|gb|ADZ87101.1| undecaprenyl diphosphate synthase [Brucella melitensis M5-90]
Length = 254
Score = 294 bits (752), Expect = 9e-78, Method: Composition-based stats.
Identities = 122/233 (52%), Positives = 161/233 (69%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA ARGLPR AGHR G+E EIV AA + G+ LT+FAFS NW R
Sbjct: 4 PRHIAIIMDGNGRWAKARGLPRSAGHRAGVEALREIVRAAGDRGLGYLTLFAFSSENWTR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S+L+ L+K F+++ L +NN++V +IG R L +I +L EAE T NTGL
Sbjct: 64 PSGEVSDLLGLLKLFIRRDLAELHRNNVRVNIIGERAELAANIRALLNEAESLTHRNTGL 123
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL IAFNY SRDEI RA++++ +D+ +G + + + L++ LDT+ +PDPDLIIRT G
Sbjct: 124 NLVIAFNYGSRDEIVRAVRSLARDVAAGLLDPSSISAELVSANLDTAGIPDPDLIIRTSG 183
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
E RLS+FLLWQ AYSEF+F+P +WPDF A + R+RRFGG+ +
Sbjct: 184 EMRLSNFLLWQAAYSEFLFLPCHWPDFRPADLDAAYETFRQRERRFGGVEPRA 236
>gi|327312847|ref|YP_004328284.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella denticola
F0289]
gi|326944605|gb|AEA20490.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella denticola
F0289]
Length = 250
Score = 294 bits (752), Expect = 1e-77, Method: Composition-based stats.
Identities = 98/245 (40%), Positives = 145/245 (59%), Gaps = 5/245 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
MV + + P HI IIMDGNGRWA R PR GH+ G+E I + +G+K LT+
Sbjct: 1 MVEELDMTRIPRHIAIIMDGNGRWATERNKPRSYGHQAGVETVRRITSECVRLGVKYLTL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW RP EI+ L+ L+ + L+ KNN++ RVIG+R L +++ L+E
Sbjct: 61 YTFSTENWNRPTDEIAALMGLVLTSLEDEI--FMKNNVRFRVIGDRERLPEEVQEKLRET 118
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSV---CSHDVDSSLIAKYLDTS 177
E T N + + +A +YS+R EI++A+K I + + + + L+ +++ T+
Sbjct: 119 ELHTEKNAAMTMVVALSYSARWEITQAMKEIVTEHQQENAVPLRPEMITEELLDRHMQTN 178
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+PDPDL+IRTGGE R+S++LLWQ+AYSE F YWPDFS A+ + R RRFG
Sbjct: 179 FMPDPDLLIRTGGELRISNYLLWQIAYSELYFCDTYWPDFSEHDLQKAITSFQSRQRRFG 238
Query: 238 GLSKK 242
K+
Sbjct: 239 KTEKQ 243
>gi|158333613|ref|YP_001514785.1| undecaprenyl pyrophosphate synthase [Acaryochloris marina
MBIC11017]
gi|158303854|gb|ABW25471.1| undecaprenyl diphosphate synthase [Acaryochloris marina MBIC11017]
Length = 250
Score = 294 bits (752), Expect = 1e-77, Method: Composition-based stats.
Identities = 86/240 (35%), Positives = 138/240 (57%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + P H+ +IMDGNGRWA RGLPR GHR+G++ ++ + G++ LT
Sbjct: 11 LPSDLDVQRLPKHVAVIMDGNGRWAKQRGLPRIVGHRRGVDTLKSLLRCCKDWGVQALTA 70
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP+ E+ L+ L + L++ + +++ +G+ +L + ++ A
Sbjct: 71 YAFSTENWGRPLDEVEFLMMLFERVLRRELQEMIDEGVQIHFVGDLEALPLTLQTEIQRA 130
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
T+ N + +A NY R EI +A +NI ++ + D+D SL ++L T+ +
Sbjct: 131 MTATKDNHTIKFIVATNYGGRREIIQACRNIASKVQHNQINLDDIDESLFERHLYTAGII 190
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GE R+S+FLLWQ+AY+E WPDF R+ F AL + R RRFG ++
Sbjct: 191 DPDLLIRTSGEMRVSNFLLWQMAYAELYVTKTLWPDFDRDEFHQALKDFQDRHRRFGKVN 250
>gi|270290320|ref|ZP_06196545.1| di-trans,poly-cis-decaprenylcistransferase [Pediococcus
acidilactici 7_4]
gi|304384861|ref|ZP_07367207.1| di-trans,poly-cis-decaprenylcistransferase [Pediococcus
acidilactici DSM 20284]
gi|270281101|gb|EFA26934.1| di-trans,poly-cis-decaprenylcistransferase [Pediococcus
acidilactici 7_4]
gi|304329055|gb|EFL96275.1| di-trans,poly-cis-decaprenylcistransferase [Pediococcus
acidilactici DSM 20284]
Length = 249
Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats.
Identities = 104/239 (43%), Positives = 149/239 (62%), Gaps = 3/239 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
++ + P+H+ IIMDGNGRWA R +PR AGH++G+EV I AA+ +G+K LT++AFS
Sbjct: 11 LNENIPNHVAIIMDGNGRWAQRRFMPRVAGHKRGMEVVKTITKAASSLGVKVLTLYAFST 70
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP E+S L+KL +F L + ++V+V GN L + A T
Sbjct: 71 ENWKRPQDEVSFLMKLPITFFDTFVPELIEQGVRVKVTGNIEGLPQATQDAVNRAISDTA 130
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS---DVPDP 182
T + L A NY SRDE+++ ++I Q + +G + +D LIA+ L TS D+ DP
Sbjct: 131 HGTKMILNFALNYGSRDELTQMTRSIAQQVANGEIVPEAIDEQLIARNLQTSFLGDLADP 190
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRT GE+R+S+FLLWQ+AYSE VF WPDF+ + F + +Y RDRRFG + K
Sbjct: 191 DLLIRTSGEERISNFLLWQIAYSELVFTDTLWPDFNEQTFMEMIKEYQKRDRRFGAIKK 249
>gi|205373429|ref|ZP_03226233.1| undecaprenyl pyrophosphate synthetase [Bacillus coahuilensis m4-4]
Length = 263
Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats.
Identities = 101/241 (41%), Positives = 151/241 (62%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ ++ + P+HI IIMDGNGRWA R LPR AGH +G++ +I A ++GIK LT++
Sbjct: 22 LKEVVHFNIPNHIAIIMDGNGRWAKKRALPRVAGHHEGMKTVRKITKVANQLGIKQLTLY 81
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E+ L+KL + FL L + N+KV ++G+ ++ + +A
Sbjct: 82 AFSTENWKRPKMEVEYLMKLPEEFLGTFLPELVEENVKVTMMGDEEAIPPHTKNAVYKAI 141
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T+ N GL L A NY SR EI ++++ +D+++G + ++ + +KYL T D D
Sbjct: 142 EETKENDGLILNFALNYGSRAEILDGVRHVLKDVQNGILNEKELTEEVFSKYLMTKDFCD 201
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL+IRT GE RLS+F+LWQ+AY+EF F WPDFS E A+ + R RRFGGL
Sbjct: 202 PDLLIRTSGEIRLSNFMLWQLAYTEFWFTDVLWPDFSEEHLVEAIEAFQGRSRRFGGLKS 261
Query: 242 K 242
+
Sbjct: 262 E 262
>gi|225012219|ref|ZP_03702656.1| undecaprenyl diphosphate synthase [Flavobacteria bacterium
MS024-2A]
gi|225003774|gb|EEG41747.1| undecaprenyl diphosphate synthase [Flavobacteria bacterium
MS024-2A]
Length = 239
Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats.
Identities = 102/234 (43%), Positives = 146/234 (62%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P+H+ IIMDGNGRWA RG R GH+KG EI+ AA+ GIK LT+F FS NW
Sbjct: 3 KLPEHVAIIMDGNGRWANQRGKQRGMGHKKGASAVREIIEEAADNGIKYLTLFTFSTENW 62
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+ L++L+ S LKK F L NNIK++ IG+ L + L ++T+ NT
Sbjct: 63 SRPEDEVGILMRLLLSSLKKEFNRLNNNNIKLKSIGDLEGLPHLVREELNYVVEKTKDNT 122
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL L +A NY +++E++ A++ I +++ + VD S+I ++L + +P DL+IRT
Sbjct: 123 GLTLTLALNYGAKEELTNAMRTIANKVKNSIISPEKVDQSMINEHLYSHYLPAVDLLIRT 182
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+R+S+FLLW +AY+E F WPDFS+E AL Y R+RRFG S++
Sbjct: 183 SGEERISNFLLWHIAYAELYFTTTLWPDFSKEDLKKALINYGKRERRFGKTSEQ 236
>gi|225375367|ref|ZP_03752588.1| hypothetical protein ROSEINA2194_00992 [Roseburia inulinivorans DSM
16841]
gi|225212856|gb|EEG95210.1| hypothetical protein ROSEINA2194_00992 [Roseburia inulinivorans DSM
16841]
Length = 239
Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats.
Identities = 111/234 (47%), Positives = 157/234 (67%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ II+DGNGRWA ++G+PR GH G + + AA ++GIK LT++AFS NW
Sbjct: 2 KIPQHVAIILDGNGRWAKSKGMPRNYGHTVGAKNVETVCQAAHDMGIKYLTLYAFSTENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP +E++ L+KL++S+LK + KNN++VRVIG+ L + +KE E + N
Sbjct: 62 NRPDNEVNALMKLLESYLKNCIKTADKNNMRVRVIGDTTKLSEKFQNQIKELESASAHND 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GLNL IA NY SRDE+ R ++ ++ D+ G + +++D + YLDT D+PDPDL+IRT
Sbjct: 122 GLNLQIAINYGSRDEMLRGMRKMYADLRDGKLQENEIDETHFEAYLDTKDIPDPDLLIRT 181
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+RLS++LLWQ+AYSEF F WPDF +E A+ YN RDRRFG LS++
Sbjct: 182 SGEQRLSNYLLWQLAYSEFYFTEVPWPDFHKEELEKAVEAYNKRDRRFGALSEE 235
>gi|260910459|ref|ZP_05917128.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella sp. oral
taxon 472 str. F0295]
gi|260635405|gb|EEX53426.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella sp. oral
taxon 472 str. F0295]
Length = 245
Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats.
Identities = 95/242 (39%), Positives = 146/242 (60%), Gaps = 2/242 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + P HI IIMDGNGRWA RG R GH+ G++ I + +G+K LT+
Sbjct: 1 MEQELDIKRIPRHIAIIMDGNGRWAKERGKERSFGHQAGVDTVRRITSECVRLGVKFLTL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW RP +EI+ L+ L+ S L+ KNN++ +V+G+ L + L+E
Sbjct: 61 YTFSTENWSRPETEIAALMGLVLSSLEDEI--FMKNNVRFQVVGDIERLPQSVQDKLRET 118
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ T NT + + +A +YSSR E++RA ++I +D++ G++ D+ L+ + L+T+ +P
Sbjct: 119 MEHTARNTAMTMVVALSYSSRWELTRAAQSIARDVKQGTLQPEDITEELMNQRLETAFMP 178
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DP+L+IRTGGE R+S+++LWQ+AYSE F YWPDF+ A+ Y R RRFG
Sbjct: 179 DPELLIRTGGELRISNYMLWQIAYSELYFCDTYWPDFNEVDLHQAIASYQARQRRFGKTG 238
Query: 241 KK 242
+
Sbjct: 239 VQ 240
>gi|15965252|ref|NP_385605.1| putative undecaprenyl pyrophosphate synthetase protein
[Sinorhizobium meliloti 1021]
gi|307309275|ref|ZP_07588943.1| undecaprenyl diphosphate synthase [Sinorhizobium meliloti BL225C]
gi|42559859|sp|Q92Q51|UPPS_RHIME RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|15074432|emb|CAC46078.1| Putative undecaprenyl pyrophosphate synthetase [Sinorhizobium
meliloti 1021]
gi|306900276|gb|EFN30893.1| undecaprenyl diphosphate synthase [Sinorhizobium meliloti BL225C]
Length = 247
Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats.
Identities = 123/235 (52%), Positives = 175/235 (74%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
++ P H+ IIMDGNGRWA ARGLPR GHRKG+E V AAE+GI+ LT+FAFS
Sbjct: 6 PANVPAHVAIIMDGNGRWANARGLPRTMGHRKGVEAVRGAVRTAAEIGIRYLTLFAFSSE 65
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP +E+S+L+ L+K+F+++ L + N+++RVIG+R +L DIL +L EAE+ T
Sbjct: 66 NWNRPENEVSDLMGLLKAFIRRDLADLHRENVRIRVIGDRSNLSGDILPLLIEAEETTIA 125
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTG+ + IAFNY +RDE++RA++ + ++ +G + ++ + I+ +DT+ +PDPDLII
Sbjct: 126 NTGITVVIAFNYGARDELARAMRRLAGEVAAGRLRPEEITAERISSTIDTAGIPDPDLII 185
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
RT GE+RLS+FLLWQ AYSE +FIP+ WPDF+RE FF A+ QY R+RRFGGL++
Sbjct: 186 RTSGEERLSNFLLWQGAYSELLFIPDLWPDFTRETFFAAIEQYACRERRFGGLTQ 240
>gi|154484747|ref|ZP_02027195.1| hypothetical protein EUBVEN_02464 [Eubacterium ventriosum ATCC
27560]
gi|149734595|gb|EDM50512.1| hypothetical protein EUBVEN_02464 [Eubacterium ventriosum ATCC
27560]
Length = 245
Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats.
Identities = 108/234 (46%), Positives = 153/234 (65%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P H+ II+DGNGRWA R LPR AGH G + +I+ A ++GI+ +T++AFS NW
Sbjct: 11 NIPKHVAIILDGNGRWAKKRFLPRNAGHAAGAKNVEKIIKDAHDMGIEYITMYAFSTENW 70
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+ L+KL++++L KNN+ V+VIG R LD DIL + E E+ ++ NT
Sbjct: 71 NRPDDEVKALMKLLRNYLSDCIERANKNNMIVKVIGKRERLDQDILDRIDELEECSKNNT 130
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
G+ IA NY SRDEI+RA K + + + G + D+ + YLDT+ +PDPDL+IRT
Sbjct: 131 GITFIIALNYGSRDEITRATKKMAKAVADGELNPDDITEDTVNSYLDTAGIPDPDLLIRT 190
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE RLS++LLWQ+AY+EF F WPDF++E A+ +YN RDRRFG + +
Sbjct: 191 SGEIRLSNYLLWQLAYTEFYFTDVLWPDFNKEELKKAIVKYNERDRRFGRVKTE 244
>gi|289550949|ref|YP_003471853.1| Undecaprenyl pyrophosphate synthetase [Staphylococcus lugdunensis
HKU09-01]
gi|289180481|gb|ADC87726.1| Undecaprenyl pyrophosphate synthetase [Staphylococcus lugdunensis
HKU09-01]
Length = 253
Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats.
Identities = 96/235 (40%), Positives = 147/235 (62%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P+H+ IIMDGNGRWA R +PR GH +G++ +I A +GIK LT++AFS
Sbjct: 19 LDMRNIPEHVAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITREANNLGIKYLTLYAFS 78
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP SE++ ++ L +FLK L + N+KV IG L + + + EA+ +T
Sbjct: 79 TENWSRPESEVNYIMSLPVNFLKTFLPELIEKNVKVETIGFMEGLPESTIKAINEAKIKT 138
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NTGL L A NY R EI ++K I++++++ + ++ ++I+ +L T P+P+L
Sbjct: 139 EHNTGLRLIFAINYGGRAEIVHSVKAIYKELQAQGLDEESINENMISSHLMTKSYPEPEL 198
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE+R+S+FL+WQV+YSEF+F + WPDF + + Y R RRFGGL
Sbjct: 199 LIRTSGEQRISNFLIWQVSYSEFIFNEKLWPDFDEQELKSCIKIYQSRQRRFGGL 253
>gi|189462014|ref|ZP_03010799.1| hypothetical protein BACCOP_02686 [Bacteroides coprocola DSM 17136]
gi|189431228|gb|EDV00213.1| hypothetical protein BACCOP_02686 [Bacteroides coprocola DSM 17136]
Length = 245
Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats.
Identities = 101/239 (42%), Positives = 148/239 (61%), Gaps = 2/239 (0%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P HI IIMDGNGRWA RGL R GH+ G E + I A+ +G+K LT++ F
Sbjct: 6 QVDKTRIPAHIAIIMDGNGRWAKQRGLVRSLGHQAGAETVHVIAEEASNLGVKYLTLYTF 65
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP E++ L+ L+ +++ + KNNI R+IG L D+L L + +
Sbjct: 66 STENWNRPADEVAALMSLLIDSIEEE--TFMKNNISFRIIGETEKLPADVLNRLNQCVQR 123
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NTG+ L +A +YSS+ EI++A+K I + + G + +D+ +++YL T+ +PDPD
Sbjct: 124 TSKNTGMCLVLALSYSSKWEITKAVKEISEKVACGELNINDITDQTVSQYLATNFMPDPD 183
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRTGGE RLS+++LWQ AYSE F +WPDF E A+ Y R+RRFG S++
Sbjct: 184 LLIRTGGEIRLSNYMLWQCAYSELYFCDTFWPDFKEEELCKAICDYQRRERRFGKTSEQ 242
>gi|198275389|ref|ZP_03207920.1| hypothetical protein BACPLE_01551 [Bacteroides plebeius DSM 17135]
gi|198271725|gb|EDY95995.1| hypothetical protein BACPLE_01551 [Bacteroides plebeius DSM 17135]
Length = 243
Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats.
Identities = 98/239 (41%), Positives = 148/239 (61%), Gaps = 2/239 (0%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P HI IIMDGNGRWA +G R GH+ G E + I AA++G+K LT++ F
Sbjct: 6 QIDKNRIPAHIAIIMDGNGRWAKQQGHARTFGHQAGAETVHVIAEEAAQLGVKYLTLYTF 65
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RPV E++ L+ L+ +++ + KNNI R+IG L +++L L + ++
Sbjct: 66 STENWNRPVDEVAALMSLLMDSIEEE--TFMKNNISFRIIGETEKLPENVLARLNKCIER 123
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NTG+ L +A +YSS+ EI+ A+K I ++++ G + ++ I + L T +PDPD
Sbjct: 124 TSKNTGMCLTLALSYSSKWEITEAVKKIAREVKEGILTPEEITDQTINRCLATHYMPDPD 183
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRTGGE RLS++LLWQ AY+E F +WPDF E A+ + R+RRFG S++
Sbjct: 184 LLIRTGGEIRLSNYLLWQCAYAELYFCDTFWPDFKAEELCKAICDFQKRERRFGKTSEQ 242
>gi|332994200|gb|AEF04255.1| undecaprenyl diphosphate synthase [Alteromonas sp. SN2]
Length = 260
Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats.
Identities = 94/232 (40%), Positives = 146/232 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R GH+ G+E +V A + GI++LT+FAFS NW+R
Sbjct: 23 PKHVAIIMDGNGRWAQKKGKIRTFGHKAGVESVRAVVRFARQTGIESLTLFAFSSENWKR 82
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L L L KN ++++VIG+ + D ++ +++AE+ T N L
Sbjct: 83 PEEEVSVLMELFNLVLNSEAKRLHKNGVRLKVIGDLSAFDSKLVGKIRKAEEMTSGNNDL 142
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I A K + + ++ G + D+D ++ ++ T+ +P+ DL+IRTGG
Sbjct: 143 VLNIAANYGGRWDIVNAAKEVAEKVKQGEMSLQDIDEAVFNQHTSTASLPELDLLIRTGG 202
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ AY+E F WPDF+ ++F A++ +N+R RRFG ++
Sbjct: 203 EHRISNFLLWQCAYAELYFTDVLWPDFNEDVFQLAVDDFNVRQRRFGLTGEQ 254
>gi|127513559|ref|YP_001094756.1| undecaprenyl diphosphate synthase [Shewanella loihica PV-4]
gi|126638854|gb|ABO24497.1| Undecaprenyl pyrophosphate synthetase [Shewanella loihica PV-4]
Length = 263
Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats.
Identities = 95/241 (39%), Positives = 146/241 (60%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+A ++ S P H+ IIMDGNGRWA A+G PR GH+ G++ V+ A E+GI +LT+F
Sbjct: 16 LAELVKQSIPKHVAIIMDGNGRWAQAQGKPRVVGHKAGVKTVRRAVSMAREMGIGSLTLF 75
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP E+S L++L + L++ L KN +++ +IG+ + + A
Sbjct: 76 AFSSENWRRPEKEVSLLMELFFTVLQREIKLLDKNGVRLNIIGDISRFSARLQKQIAAAM 135
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T NTGL L +A NY R +I +A + + + +ESG + S ++++L + P+
Sbjct: 136 EKTANNTGLILNVAANYGGRWDIVQAAQTLAKKVESGEMTSSQFTEEALSQHLSMQNQPE 195
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRTGG+ R+S+F+LWQ AY+E VF WPDF + F A+ + R RRFG
Sbjct: 196 VDLMIRTGGDFRISNFVLWQAAYAELVFTDVLWPDFDEQAFKDAVAVFATRQRRFGLTGS 255
Query: 242 K 242
+
Sbjct: 256 Q 256
>gi|75909661|ref|YP_323957.1| undecaprenyl pyrophosphate synthase [Anabaena variabilis ATCC
29413]
gi|75703386|gb|ABA23062.1| Undecaprenyl pyrophosphate synthetase [Anabaena variabilis ATCC
29413]
Length = 246
Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats.
Identities = 92/237 (38%), Positives = 142/237 (59%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P HI +IMDGNGRWA ++GLPR AGHR+G E++ + GIK LT +AFS
Sbjct: 6 LDPQKIPQHIAVIMDGNGRWATSQGLPRIAGHRQGARTLKELLRCCKDWGIKALTAYAFS 65
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP+ E+ L+ L + L++ + + +++ IG+ +L + ++ + +T
Sbjct: 66 TENWQRPIEEVDFLMLLFERLLRRELSQMHREGVRISFIGDLSALPKSLQTEMERSMTET 125
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N ++ +A NY SR+EI+RA + + + ++ G + + V+ ++ ++L T D PDL
Sbjct: 126 LNNQAIHFTVAVNYGSRNEITRACRQVAELVQQGKLSADAVNEDIVEQHLYTVDTQPPDL 185
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
+IRT GE RLS+FLLWQ+AY+E F WPDF R F AL Y RDRRFG +
Sbjct: 186 LIRTSGEMRLSNFLLWQMAYTEMYFTDILWPDFDRAAFHQALLSYQKRDRRFGQVKA 242
>gi|288870962|ref|ZP_06115928.2| di-trans,poly-cis-decaprenylcistransferase [Clostridium hathewayi
DSM 13479]
gi|288865249|gb|EFC97547.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium hathewayi
DSM 13479]
Length = 279
Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats.
Identities = 109/240 (45%), Positives = 152/240 (63%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M ++ + PDH+ II+DGNGRWA RGLPR GH++G V V AA +GIK LT+
Sbjct: 40 MEVNIDNMVIPDHVAIILDGNGRWAKKRGLPRSMGHKEGCVVVERTVEDAARIGIKYLTV 99
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW+R E+ L++L + ++ + K NN++VR+IG R D DI+ +
Sbjct: 100 YGFSTENWKRSGEEVGALMQLFRYYMVRLLKIAKTNNVRVRMIGERSRFDQDIIDGINRL 159
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E +T NTGL IA NY RDEI RA + I +D G + +D ++ + YLDT+++P
Sbjct: 160 ERETENNTGLTFVIAVNYGGRDEIVRAARKIMKDTADGKITPDQMDEAVFSSYLDTAEIP 219
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GE RLS++LLWQ+AY+E YWPDF++E A+ YN RDRRFGG+
Sbjct: 220 DPDLLIRTSGELRLSNYLLWQLAYTELYVTDCYWPDFNKEELKKAIAAYNSRDRRFGGVK 279
>gi|228476488|ref|ZP_04061178.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
salivarius SK126]
gi|228251909|gb|EEK10955.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
salivarius SK126]
Length = 249
Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats.
Identities = 106/235 (45%), Positives = 149/235 (63%), Gaps = 4/235 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P+HIGIIMDGNGRWA R PR GH+ G++ ++ A+++G+K LT++AFS NW
Sbjct: 15 NIPNHIGIIMDGNGRWAKKRLQPRVMGHKAGMDALQKVTIEASQLGVKVLTVYAFSTENW 74
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+ ++ L F K L KNN+++ IG+ L + L L++A +QT+ N+
Sbjct: 75 SRPQDEVKFIMNLPVEFFNKYVPELDKNNVRILTIGDNSRLPKETLDALEKAVEQTKHNS 134
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDL 184
GL L A NY R EI A++ I +++E+G + +D LIAK+L T +P DPDL
Sbjct: 135 GLVLNFALNYGGRAEIVSAVQAIAKEVEAGKLGPEAIDEDLIAKHLMTDKLPYLYRDPDL 194
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IIRT GE RLS+FL WQ AYSEF F +WPDF ++ A++ YN R RRFGG+
Sbjct: 195 IIRTSGELRLSNFLPWQSAYSEFYFTDVFWPDFDQQGLRQAISDYNKRHRRFGGV 249
>gi|311280857|ref|YP_003943088.1| undecaprenyl diphosphate synthase [Enterobacter cloacae SCF1]
gi|308750052|gb|ADO49804.1| undecaprenyl diphosphate synthase [Enterobacter cloacae SCF1]
Length = 252
Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats.
Identities = 92/242 (38%), Positives = 143/242 (59%), Gaps = 4/242 (1%)
Query: 6 MSSSPP----DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+S + P H+ IIMDGNGRWA +G R GH+ G + V+ AA GI LT++
Sbjct: 8 ISENLPAHGCRHVAIIMDGNGRWAKRQGKIRAFGHKAGAKSVRRAVSFAANNGISALTLY 67
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+S L++L L SL ++N+++R+IG+ + I ++++E
Sbjct: 68 AFSSENWNRPEQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNARIQERIRKSE 127
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T+ NTGL L IA NY R +I + ++ + + ++ G + + + L+++ + ++
Sbjct: 128 ALTQNNTGLTLNIAANYGGRWDIIQGVQQLAEQVQKGELSPNQITEDLLSQQICMHELAP 187
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRTGGE R+S+FLLWQ+AY+E F WPDF + F AL+ + R+RRFGG
Sbjct: 188 VDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALHAFANRERRFGGTEP 247
Query: 242 KG 243
G
Sbjct: 248 GG 249
>gi|262276523|ref|ZP_06054332.1| undecaprenyl pyrophosphate synthetase [Grimontia hollisae CIP
101886]
gi|262220331|gb|EEY71647.1| undecaprenyl pyrophosphate synthetase [Grimontia hollisae CIP
101886]
Length = 256
Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats.
Identities = 92/239 (38%), Positives = 142/239 (59%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ S P HI +IMDGNGRWA ARG R GH+ G++ + V+AA +G++ LT+FAF
Sbjct: 9 ELDPSLLPKHIAVIMDGNGRWAKARGKARMFGHKAGVDAVRKTVSAANRLGVQVLTLFAF 68
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRRP E+S L++L + L + L KN ++++VIG+ + + AE
Sbjct: 69 SSENWRRPEEEVSLLMELFVTVLGREVKRLHKNGVRLKVIGDTTRFSQSLQDKIAAAEAL 128
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NT L L +A NY + +I +A+K + +E G + + + + + +L ++ +PD D
Sbjct: 129 TANNTRLVLNVAANYGGQWDIMQAVKKLAAQVERGEIPAEQLTEADLQVHLSSAGLPDVD 188
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRT GE R+S+F+LWQ AY+E F ++WPDF A+ Y R+RRFG ++
Sbjct: 189 LMIRTSGECRISNFMLWQAAYAELYFTDQFWPDFDETSLTEAIAWYINRERRFGCTGEQ 247
>gi|291563193|emb|CBL42009.1| undecaprenyl diphosphate synthase [butyrate-producing bacterium
SS3/4]
Length = 242
Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats.
Identities = 110/233 (47%), Positives = 156/233 (66%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ +I+DGNGRWA RGLPR GH+KG E ++V AA +GI+ LT++ FS NW
Sbjct: 6 KIPAHVALILDGNGRWAKKRGLPRQLGHKKGCETLEQVVEDAARLGIRYLTVYGFSTENW 65
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP E+ L++L + + K+ +KNNI+VR+IG R DI+ + E++T+ NT
Sbjct: 66 KRPEEEVGALMQLFRFYAKRLLAMAEKNNIRVRMIGERGRFASDIVDAINVLEEKTKKNT 125
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
G+ IA NY SRDEI+RA++ I D+E G + D+ + A YLDT+ +PDPDL+IRT
Sbjct: 126 GMTFVIAVNYGSRDEITRAVRKIMTDVEEGKIAPEDMTEEVFASYLDTAGIPDPDLMIRT 185
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
GE RLS++LLWQ+AYSE WPDF++E +A+ QYN R+RRFGG++
Sbjct: 186 SGELRLSNYLLWQLAYSELYVTECLWPDFNKEELLNAIRQYNKRERRFGGVTA 238
>gi|315658451|ref|ZP_07911323.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
lugdunensis M23590]
gi|315496780|gb|EFU85103.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
lugdunensis M23590]
Length = 282
Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats.
Identities = 96/235 (40%), Positives = 147/235 (62%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P+H+ IIMDGNGRWA R +PR GH +G++ +I A +GIK LT++AFS
Sbjct: 48 LDMRNIPEHVAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITREANNLGIKYLTLYAFS 107
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP SE++ ++ L +FLK L + N+KV IG L + + + EA+ +T
Sbjct: 108 TENWSRPESEVNYIMSLPVNFLKTFLPELIEKNVKVETIGFMEGLPESTIKAINEAKIKT 167
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NTGL L A NY R EI ++K I++++++ + ++ ++I+ +L T P+P+L
Sbjct: 168 EHNTGLRLIFAINYGGRAEIVHSVKAIYKELQAQGLDEESINENMISSHLMTKSYPEPEL 227
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE+R+S+FL+WQV+YSEF+F + WPDF + + Y R RRFGGL
Sbjct: 228 LIRTSGEQRISNFLIWQVSYSEFIFNEKLWPDFDEQELKSCIKIYQSRQRRFGGL 282
>gi|197286126|ref|YP_002151998.1| undecaprenyl pyrophosphate synthetase [Proteus mirabilis HI4320]
gi|194683613|emb|CAR44510.1| undecaprenyl pyrophosphate synthetase [Proteus mirabilis HI4320]
Length = 252
Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats.
Identities = 93/236 (39%), Positives = 145/236 (61%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S+S P H+ IIMDGNGRWA +G R GHR GI+ + V+ + + I++LT++AFS
Sbjct: 9 SASKPKHVAIIMDGNGRWAKKQGKLRVTGHRAGIKAVRDAVSFSVKHKIESLTLYAFSSE 68
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP E+S L++L L SL K+N+++ +IG+ + +K + T
Sbjct: 69 NWNRPEQEVSSLMELFVFALDNEVKSLHKHNVRLTIIGDISRFSRRLQDRIKNSVALTAN 128
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTGLNL IA NY R +I+++++ + + G + D++ + I+ +L D DL+I
Sbjct: 129 NTGLNLNIAANYGGRWDITQSVQQLASSLAKGELAVEDINENTISSHLCLHDQSPVDLVI 188
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE R+S+FL+WQ+AY+E F WPDF ++F +AL+ + R+RRFGG + +
Sbjct: 189 RTGGEHRISNFLIWQIAYAELYFTQVLWPDFDEQVFQNALDAFAKRERRFGGTTSE 244
>gi|218710314|ref|YP_002417935.1| undecaprenyl pyrophosphate synthetase [Vibrio splendidus LGP32]
gi|218323333|emb|CAV19510.1| Undecaprenyl pyrophosphate synthetase [Vibrio splendidus LGP32]
Length = 255
Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats.
Identities = 99/236 (41%), Positives = 157/236 (66%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ S P HI IIMDGNGRWA A+G PR GH+ G++ + +++AA +GIK +T+FAFS
Sbjct: 13 TDSLPKHIAIIMDGNGRWAKAQGKPRVFGHKNGVQAVRKTISSAARLGIKAVTLFAFSSE 72
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+ L++L S L L KNN+++RVIG++ ++ + ++EAE T
Sbjct: 73 NWRRPEEEVGLLMELFISVLSSEVKKLHKNNLQLRVIGDKSRFNERLQKKIEEAEALTST 132
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTG+ + IA NY + +I +A+ +I Q ++SG + D+D ++I ++L +D+P+ DL+I
Sbjct: 133 NTGMVINIAANYGGKWDIQQAMTSIAQQVKSGDINVEDIDEAMITQHLTMADIPEVDLLI 192
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE R+S+F+LWQ+AY+E F ++WPDF+ + A+ + R+RRFG ++
Sbjct: 193 RTSGECRISNFMLWQLAYAEMYFTEQFWPDFNEDSLVEAVTWFVNRERRFGCTGEQ 248
>gi|299134997|ref|ZP_07028188.1| undecaprenyl diphosphate synthase [Afipia sp. 1NLS2]
gi|298589974|gb|EFI50178.1| undecaprenyl diphosphate synthase [Afipia sp. 1NLS2]
Length = 252
Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats.
Identities = 120/232 (51%), Positives = 157/232 (67%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWAAARGLPR GHR+G+E +++ AA E+GI LTIF+FS NW R
Sbjct: 18 PRHVAIIMDGNGRWAAARGLPRAEGHRRGVEALRKVLRAAHELGISYLTIFSFSSENWSR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SEI +L L++ F++ SL + + VR+IG R L+ DI +LKEAED TR NT L
Sbjct: 78 PASEIGDLFGLLRRFIRNDLASLHSDGVCVRIIGEREGLEPDIKALLKEAEDLTRHNTRL 137
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +AFNY SR EI+ A + + ++ G + + + YLD D+PDPDLIIRT G
Sbjct: 138 TLVVAFNYGSRHEIAHAAQRLAVEVAEGKRDPATITAETLGSYLDVPDIPDPDLIIRTSG 197
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+RLS+FL+WQ AYSE VF+P +WPDF + A+ +Y R+RRFGGL K
Sbjct: 198 EQRLSNFLMWQAAYSELVFVPIHWPDFDKAALEGAIAEYATRERRFGGLIAK 249
>gi|150003439|ref|YP_001298183.1| undecaprenyl pyrophosphate synthase [Bacteroides vulgatus ATCC
8482]
gi|254881262|ref|ZP_05253972.1| undecaprenyl pyrophosphate synthetase [Bacteroides sp. 4_3_47FAA]
gi|294777678|ref|ZP_06743129.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides vulgatus
PC510]
gi|319640264|ref|ZP_07994989.1| undecaprenyl pyrophosphate synthetase [Bacteroides sp. 3_1_40A]
gi|149931863|gb|ABR38561.1| undecaprenyl pyrophosphate synthetase [Bacteroides vulgatus ATCC
8482]
gi|254834055|gb|EET14364.1| undecaprenyl pyrophosphate synthetase [Bacteroides sp. 4_3_47FAA]
gi|294448746|gb|EFG17295.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides vulgatus
PC510]
gi|317388039|gb|EFV68893.1| undecaprenyl pyrophosphate synthetase [Bacteroides sp. 3_1_40A]
Length = 243
Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats.
Identities = 104/240 (43%), Positives = 152/240 (63%), Gaps = 2/240 (0%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ S P H+ IIMDGNGRWA RG R GH+ G E + I AA +G+K LT++
Sbjct: 5 EQIDKSRIPAHVAIIMDGNGRWAKQRGQARSFGHQAGAETVHIIAEEAARLGVKYLTLYT 64
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RPV E++ L+ L+ +++ + KNNI R+IG+ L ++L L + +
Sbjct: 65 FSTENWNRPVDEVAALMSLLMDSIEEE--TFMKNNISFRIIGDTAKLPVEVLERLNQCIE 122
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
+T +NTG+ L +A +YSS+ EI+ A++ I I++ + D+D +LI+ +L T+ +PDP
Sbjct: 123 RTSINTGMCLTLALSYSSKWEITEAVRQIAAKIQNDKLAIEDIDDNLISAHLSTNYMPDP 182
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL+IRTGGE RLS++LLWQ AYSE F +WPDF E F A+ Y R+RRFG S++
Sbjct: 183 DLLIRTGGEIRLSNYLLWQCAYSELYFCETFWPDFREEEFCKAIYDYQKRERRFGKTSEQ 242
>gi|319900209|ref|YP_004159937.1| Undecaprenyl pyrophosphate synthetase [Bacteroides helcogenes P
36-108]
gi|319415240|gb|ADV42351.1| Undecaprenyl pyrophosphate synthetase [Bacteroides helcogenes P
36-108]
Length = 244
Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats.
Identities = 101/240 (42%), Positives = 145/240 (60%), Gaps = 2/240 (0%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ + P H+ IIMDGNGRWA RG R GH+ G E + I AA +G+K LT++
Sbjct: 5 EQIDFNRMPRHVAIIMDGNGRWAKQRGHERSYGHQVGAETVHIIAEEAARLGVKYLTLYT 64
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RP E++ L+ L+ +++ + KNNI+ RVIG+ L ++ L +
Sbjct: 65 FSTENWNRPSDEVAALMGLLFDSIEEE--TFMKNNIRFRVIGDIGKLPVNVQQRLNACVE 122
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTG++L +A +YSSR EI+ A + I + G + +DS L +++L T+ +PDP
Sbjct: 123 HTSRNTGMSLILALSYSSRWEITEATRQIAVLAQQGKLAPDQIDSKLFSQHLTTNFMPDP 182
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL+IRTGGE RLS++LLWQ AYSE F YWPDF E A+ Y R+RR+G S++
Sbjct: 183 DLLIRTGGEIRLSNYLLWQAAYSELYFCDTYWPDFREEELCKAICDYQKRERRYGKTSEQ 242
>gi|238916788|ref|YP_002930305.1| undecaprenyl pyrophosphate synthetase [Eubacterium eligens ATCC
27750]
gi|238872148|gb|ACR71858.1| undecaprenyl pyrophosphate synthetase [Eubacterium eligens ATCC
27750]
Length = 244
Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats.
Identities = 106/234 (45%), Positives = 153/234 (65%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ +I+DGNGRWA R LPR GH +G +V +++ E+G+K T++AFS NW
Sbjct: 11 KIPGHVAVILDGNGRWAKKRHLPRTMGHVQGSKVVEDMLYVVDELGVKYFTVYAFSTENW 70
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+R E+S L+ +++++LK KNN++ RVIG + L DI+ + E++TR NT
Sbjct: 71 KRSTEEVSTLMGILRTYLKDCVKKSMKNNVRCRVIGRKDELSQDIIDSINNLEEKTRNNT 130
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GLN IA NY RDEI+RA++ I + GS+ D+D I+ LDT ++PDPDL+IRT
Sbjct: 131 GLNFTIAINYGGRDEITRAVRKIAGKVSEGSLKPEDIDEDTISNNLDTWELPDPDLLIRT 190
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+RLS++L WQ+AY+EF F YWPDF RE A +YN +RRFGG+ ++
Sbjct: 191 SGEQRLSNYLCWQLAYTEFYFTDIYWPDFDREELIKAFEKYNKTERRFGGVKEE 244
>gi|88857973|ref|ZP_01132615.1| undecaprenyl pyrophosphate synthetase [Pseudoalteromonas tunicata
D2]
gi|88819590|gb|EAR29403.1| undecaprenyl pyrophosphate synthetase [Pseudoalteromonas tunicata
D2]
Length = 254
Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats.
Identities = 99/239 (41%), Positives = 143/239 (59%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ S P HI IIMDGNGRWA RG PR GH+KG++ V + + I +LT+FAF
Sbjct: 7 TVSQQSLPKHIAIIMDGNGRWAQQRGKPRVFGHKKGVDAVRRAVQFCSRLEISSLTLFAF 66
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRRP E+S L++L L K L KNN+K+++IG+ + + EA+
Sbjct: 67 SSENWRRPEDEVSTLMELFLLVLTKEVKKLHKNNVKLQIIGDLSRFSAKLQQRVVEAQAL 126
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N GL L IA NY R +I +A K + D+E G++ S D+ +++ + ++ D
Sbjct: 127 TKDNQGLCLNIAANYGGRWDIMQAAKKLAADVEQGNLQSSDITEDMLSANISMAEQAPLD 186
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRTGG+ R+S+FLLWQ AY+E F WPDF E F +A+ Y R+RRFG ++
Sbjct: 187 LLIRTGGDLRISNFLLWQAAYAELYFTETLWPDFDDEAFANAIACYVSRERRFGCTGEQ 245
>gi|299823043|ref|ZP_07054929.1| Di-trans,poly-cis-decaprenylcistransferase [Listeria grayi DSM
20601]
gi|299816572|gb|EFI83810.1| Di-trans,poly-cis-decaprenylcistransferase [Listeria grayi DSM
20601]
Length = 261
Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats.
Identities = 97/231 (41%), Positives = 133/231 (57%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HI IIMDGNGRWA R LPR AGH++G+EV I A+ + I LT++AFS NW
Sbjct: 31 PMPKHIAIIMDGNGRWAKKRFLPRIAGHKEGMEVVKRITKFASRLKIDVLTLYAFSTENW 90
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP E+ L+KL F L +N+++ V+G R +L L ++ A T
Sbjct: 91 KRPEEEVDFLMKLPVEFFDTFVPDLIDHNVRINVMGYRENLPAHTLQAVENAIRDTAHCD 150
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL L A NY R EI A+K ++ ++ I +L ++ + DPDL+IRT
Sbjct: 151 GLTLNFALNYGGRSEIVSAMKAAATEMLKQGKSIDSLNEEDIEAHLMSNGLGDPDLLIRT 210
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE RLS+F+LWQ+AYSEF F +WPDFS + A+ +Y R RR+GGL
Sbjct: 211 SGELRLSNFMLWQLAYSEFYFTETHWPDFSEDDLTKAIMEYQQRSRRYGGL 261
>gi|22299306|ref|NP_682553.1| undecaprenyl pyrophosphate synthetase [Thermosynechococcus
elongatus BP-1]
gi|42559974|sp|Q8DI29|UPPS_THEEB RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|22295489|dbj|BAC09315.1| undecaprenyl pyrophosphate synthetase [Thermosynechococcus
elongatus BP-1]
Length = 251
Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats.
Identities = 87/239 (36%), Positives = 133/239 (55%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ A + P H+ +IMDGNGRWA R LPR GH++G++ +++ + GI+ LT
Sbjct: 13 LPADLDRDRLPRHVAVIMDGNGRWAKQRNLPRIMGHQRGVDTLKDLLRCCKDWGIEALTA 72
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP+ E+ L+ L + L++ + +++ +G+ L + ++ A
Sbjct: 73 YAFSTENWGRPLPEVEFLMTLFEQVLRRELGEMVAEGVQIHFVGDLTCLPKSLQAEIERA 132
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
T N + +A NY R EI A ++I +++G + D+D L ++L T +P
Sbjct: 133 VAATANNQKIKFVVATNYGGRREIIHACRSIAAQVKAGLLDPADIDEVLFERHLYTGGLP 192
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRT GE R+S+F LWQVAY+E WPDF R F AL Y R RRFG +
Sbjct: 193 DPDLLIRTSGELRISNFFLWQVAYAEIYVTKTLWPDFDRSAFHEALRDYQQRQRRFGRV 251
>gi|260886935|ref|ZP_05898198.1| di-trans,poly-cis-decaprenylcistransferase [Selenomonas sputigena
ATCC 35185]
gi|330839276|ref|YP_004413856.1| undecaprenyl diphosphate synthase [Selenomonas sputigena ATCC
35185]
gi|260862997|gb|EEX77497.1| di-trans,poly-cis-decaprenylcistransferase [Selenomonas sputigena
ATCC 35185]
gi|329747040|gb|AEC00397.1| undecaprenyl diphosphate synthase [Selenomonas sputigena ATCC
35185]
Length = 258
Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats.
Identities = 93/238 (39%), Positives = 147/238 (61%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ S P H+ +IMDGNGRWA +G R GHR G++ ++I+ A ++ ++ LT++AFS
Sbjct: 21 IERSRLPRHVAVIMDGNGRWAKGQGFLRTVGHRAGVDTLHDILDTAIDLKLEVLTVYAFS 80
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+ L++L +L K + + N+++R IG L +++ ++ AE+
Sbjct: 81 TENWKRPHDEVDFLMRLFSEYLDKEEREMHEKNVRIRFIGRVDELTPELIRRVRHAEELM 140
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NTG++ +A NY +DEI RA++ + +++G + ++ L LDT ++P DL
Sbjct: 141 KNNTGVHFCVAVNYGGQDEICRAVQGLAGKVQAGELSPEEITPELFQASLDTKELPPVDL 200
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IRT G+ RLS+FLLWQ AY+EF F WPDF E F AL Y R+RRFGG+ +K
Sbjct: 201 VIRTSGDMRLSNFLLWQAAYAEFWFTETNWPDFKPECFMEALRDYASRERRFGGIKEK 258
>gi|332522667|ref|ZP_08398919.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus porcinus
str. Jelinkova 176]
gi|332313931|gb|EGJ26916.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus porcinus
str. Jelinkova 176]
Length = 249
Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats.
Identities = 110/240 (45%), Positives = 143/240 (59%), Gaps = 4/240 (1%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P HIGIIMDGNGRWA R PR GH+ G++ E+ A++ G+K LT++AF
Sbjct: 10 EVKLEKIPKHIGIIMDGNGRWAKKRLKPRVFGHKAGMDALQEVTLTASKYGVKVLTVYAF 69
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP E+ ++ L F K L KNN+++++IG L + L LK A +
Sbjct: 70 STENWTRPQDEVKFIMNLPVEFFDKYVPELNKNNVRIQMIGETHRLPAETLNALKRAIET 129
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP--- 180
TR N+GL L A NY R EI+ A++ I QD+ ++ D+ LIA YL T +P
Sbjct: 130 TRKNSGLVLNFALNYGGRAEITSAVRMIAQDVLDANLNPGDITEELIANYLMTDHLPYLY 189
Query: 181 -DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+PDLIIRT GE RLS+FL WQ AYSEF F P WPDF F AL +YN R RRFGG+
Sbjct: 190 RNPDLIIRTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKSAEFIKALEEYNRRHRRFGGV 249
>gi|296877240|ref|ZP_06901280.1| Di-trans,poly-cis-decaprenylcistransferase [Streptococcus
parasanguinis ATCC 15912]
gi|296431760|gb|EFH17567.1| Di-trans,poly-cis-decaprenylcistransferase [Streptococcus
parasanguinis ATCC 15912]
Length = 249
Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats.
Identities = 107/234 (45%), Positives = 140/234 (59%), Gaps = 4/234 (1%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HIGIIMDGNGRWA R PR GH+ G+E E+ AA +G++ LT++AFS NW
Sbjct: 16 VPKHIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQEVTIAAKNMGVQVLTVYAFSTENWA 75
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ ++ L F + L +NN+K+++IG+ L + L L+ AE T LNTG
Sbjct: 76 RPEDEVKFIMHLPVEFYDRFVPELHRNNVKIQMIGDTKKLPKETLEALERAEAMTHLNTG 135
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLI 185
L L A NY R EI++A+K I Q++ D+ +IA YL T +P DPDLI
Sbjct: 136 LILNFALNYGGRAEITQAVKQIAQEVLDAKFSPEDITEEVIADYLYTESLPRILRDPDLI 195
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRT GE RLS+FL WQ AYSE F WPDF E A+ +Y+ R RRFGG+
Sbjct: 196 IRTSGEIRLSNFLPWQAAYSELYFTDVMWPDFGEEALRSAVVEYSHRHRRFGGV 249
>gi|15895067|ref|NP_348416.1| undecaprenyl pyrophosphate synthase [Clostridium acetobutylicum
ATCC 824]
gi|42559867|sp|Q97I62|UPPS_CLOAB RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|15024763|gb|AAK79756.1|AE007688_5 Undecaprenyl pyrophosphate synthase [Clostridium acetobutylicum
ATCC 824]
gi|325509205|gb|ADZ20841.1| Undecaprenyl pyrophosphate synthase [Clostridium acetobutylicum EA
2018]
Length = 257
Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats.
Identities = 112/236 (47%), Positives = 147/236 (62%), Gaps = 3/236 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S+ P HI IIMDGNGRWA R LPR GH+ G E IV +++G+K LT++ FS N
Sbjct: 22 SNIPKHIAIIMDGNGRWAKKRNLPRTMGHKAGGEALKRIVRECSDIGVKYLTVYGFSTEN 81
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP E++ +++LI FLK+ F L KNN+ + IGN L L + + L +A+++T+ N
Sbjct: 82 WIRPKEEVNAIMRLIVEFLKREFNELNKNNVIINPIGNILGLPEACITALNDAKNKTKNN 141
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV---DSSLIAKYLDTSDVPDPDL 184
TGL L +A NY RDEI A+KNIF E + ++ + YL T +PDPD+
Sbjct: 142 TGLMLNLALNYGGRDEILNAVKNIFASYEENKISKDEIFNLSDEEFSSYLYTGCIPDPDI 201
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IIR GEKRLS+FLLWQ AYSEF + WPDFS E A+ Y RDRRFGG+
Sbjct: 202 IIRPSGEKRLSNFLLWQCAYSEFWYSNINWPDFSIEDLHTAIKDYQNRDRRFGGVK 257
>gi|222152441|ref|YP_002561616.1| undecaprenyl pyrophosphate synthase [Streptococcus uberis 0140J]
gi|222113252|emb|CAR40767.1| undecaprenyl pyrophosphate synthetase [Streptococcus uberis 0140J]
Length = 249
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 112/236 (47%), Positives = 142/236 (60%), Gaps = 4/236 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
P HIGIIMDGNGRWA R PR GH+ G++ E+ AA++ G+K LT++AFS N
Sbjct: 14 EKIPKHIGIIMDGNGRWAKKRLKPRVFGHKAGMDALQEVTIAASQYGVKVLTVYAFSTEN 73
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP E+S ++ L F K L KNN+++++IG L + L L A + TR N
Sbjct: 74 WSRPQDEVSFIMNLPVEFFDKYVPELNKNNVRIQMIGETHRLPEATLSALNRAIEATRKN 133
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPD 183
+GL L A NY R EI+ A+K I QD+ ++ D+ LIA YL T +P DPD
Sbjct: 134 SGLVLNFALNYGGRAEITNAVKLIAQDVLDANLNPGDITEDLIANYLLTDHLPYLYRDPD 193
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IIRT GE RLS+FL WQ AYSE F P WPDF + F AL +YN R RRFGGL
Sbjct: 194 FIIRTSGELRLSNFLPWQSAYSELYFTPILWPDFKKTAFEEALREYNRRHRRFGGL 249
>gi|159903635|ref|YP_001550979.1| undecaprenyl pyrophosphate synthetase [Prochlorococcus marinus str.
MIT 9211]
gi|159888811|gb|ABX09025.1| Undecaprenyl pyrophosphate synthetase (UPPS) [Prochlorococcus
marinus str. MIT 9211]
Length = 266
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 88/241 (36%), Positives = 136/241 (56%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P+HI +IMDGNGRWA ARGL R GH G++ + ++ G+K LT+
Sbjct: 18 LPEGLDPLRTPEHIAVIMDGNGRWAKARGLSRTKGHIAGVDALKATLRLCSDWGLKALTV 77
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP E++ L+ L + LK+ +L +++R +G+ L + ++ EA
Sbjct: 78 YAFSTENWSRPSEEVTFLMALFQRVLKRELEALILQEVRIRFLGDLDQLPGQLQDLITEA 137
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
T N G++ + NY R E+ + + + + +G + +D ++ A L T++
Sbjct: 138 TVLTSGNKGIHFNVCTNYGGRRELVKVAQRLAEKSVNGDLDPSLIDENVFAAELCTANDV 197
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GE+RLS+FLLWQ+AY+E WPDF + AL Y R RRFGGL
Sbjct: 198 DPDLLIRTSGERRLSNFLLWQLAYAEIHVTDVLWPDFDKSSLLKALLDYQSRSRRFGGLQ 257
Query: 241 K 241
+
Sbjct: 258 Q 258
>gi|331701340|ref|YP_004398299.1| Undecaprenyl pyrophosphate synthase [Lactobacillus buchneri NRRL
B-30929]
gi|329128683|gb|AEB73236.1| Undecaprenyl pyrophosphate synthase [Lactobacillus buchneri NRRL
B-30929]
Length = 256
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 102/240 (42%), Positives = 142/240 (59%), Gaps = 3/240 (1%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + + P H+ IIMDGNGRWA R LPR AGH++G+E I A+++G+K LT++AF
Sbjct: 14 QLKTDNIPAHVAIIMDGNGRWAQKRHLPRIAGHKRGMETVKTITKVASDLGVKVLTLYAF 73
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP E+ L+ L F L KNN++VRV+G + L + +A
Sbjct: 74 STENWKRPHDEVIYLMGLPVKFFNDFVPDLVKNNVQVRVMGIKDQLPVQTQKAVNDAIKD 133
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT---SDVP 180
T TG+ L A NY SR +I A++ I + + SG + + I L T D+
Sbjct: 134 TADCTGMILNFALNYGSRLDIRMAVQQIGRQVASGQLDPEQITDQTIDANLMTGFLGDLA 193
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GE+R+S+FLLWQ+AYSE VF WPDF R +F + +Y RDRRFGG+
Sbjct: 194 DPDLLIRTSGEERISNFLLWQIAYSELVFTDVLWPDFDRTVFEQMIMEYQQRDRRFGGIK 253
>gi|169830794|ref|YP_001716776.1| undecaprenyl diphosphate synthase [Candidatus Desulforudis
audaxviator MP104C]
gi|169637638|gb|ACA59144.1| undecaprenyl diphosphate synthase [Candidatus Desulforudis
audaxviator MP104C]
Length = 252
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 98/240 (40%), Positives = 143/240 (59%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+V + P H+ +IMDGNGRWA RGLPR AGHR G E E+V +AE+G++ LT
Sbjct: 12 LVQMLDRERVPAHVAVIMDGNGRWAQKRGLPRAAGHRAGAEALREVVRFSAELGVRFLTA 71
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW+RP +E+ L+ L+ ++ K + + +R IG L D L EA
Sbjct: 72 YTFSTENWKRPRAEVDGLMSLLVEYVYKELEEMHSQGVCLRTIGRPEELPPDAREALAEA 131
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+TR N+ + + +A NY R E+ A++ + +I SG + D+D + L T+ +P
Sbjct: 132 VARTRDNSRIVVNLALNYGGRRELVDAVRRLGVEIRSGRLNPGDIDEETVQSALYTAGIP 191
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IR GE R+S+F+LWQ+AY+EF P WPDF R AL ++ RDRR+GGL+
Sbjct: 192 DPDLLIRPAGEFRISNFMLWQLAYTEFWVTPVLWPDFGRIHLAQALLEFQRRDRRYGGLN 251
>gi|160893345|ref|ZP_02074132.1| hypothetical protein CLOL250_00894 [Clostridium sp. L2-50]
gi|156865037|gb|EDO58468.1| hypothetical protein CLOL250_00894 [Clostridium sp. L2-50]
Length = 242
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 101/232 (43%), Positives = 142/232 (61%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P+H+ IIMDGNGRWA R +PR GH +G + A E+GIK LT++AFS NW
Sbjct: 11 NIPEHVAIIMDGNGRWAKKRLMPRTYGHSEGAKAIERTCENADELGIKYLTVYAFSTENW 70
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+R V E+S ++ + + +L +NN++VR+IG R L +DI+ + E T NT
Sbjct: 71 KRSVEEVSTIMNIFRKYLVDSIERSNRNNMRVRIIGKREDLPEDIVEKMYNLEKATANNT 130
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL +A NY RDEI+RA++ I D +G + V ++ YLDT ++ DPDL+IRT
Sbjct: 131 GLQFSVAINYGGRDEITRAVRQIASDCMAGKLSPDAVTEDTVSSYLDTKELTDPDLLIRT 190
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
GE R S+FL WQ+AYSEF F WPDF + +A Y+ RDRR+GG+
Sbjct: 191 SGELRTSNFLPWQIAYSEFYFTDVLWPDFDMDELVNACRYYSHRDRRYGGVK 242
>gi|306841881|ref|ZP_07474561.1| undecaprenyl diphosphate synthase [Brucella sp. BO2]
gi|306844022|ref|ZP_07476617.1| undecaprenyl diphosphate synthase [Brucella sp. BO1]
gi|306275777|gb|EFM57501.1| undecaprenyl diphosphate synthase [Brucella sp. BO1]
gi|306288011|gb|EFM59413.1| undecaprenyl diphosphate synthase [Brucella sp. BO2]
Length = 254
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 122/233 (52%), Positives = 157/233 (67%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA ARGLPR AGHR G+E IV A + G+ LT+FAFS NW R
Sbjct: 4 PRHIAIIMDGNGRWAKARGLPRSAGHRAGMETLRAIVRTAGDRGLGYLTLFAFSSENWTR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S+L+ L+K F+++ L +NN++V +IG R L DI +L EAE T NTGL
Sbjct: 64 PSGEVSDLLGLLKLFIRRDLAELHRNNVRVSIIGERAELAADIRALLNEAESLTHRNTGL 123
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL IAFNY SRDEI RA+K++ +D+ +G + + + L + LDT+ +PDPDLIIRT G
Sbjct: 124 NLVIAFNYGSRDEIVRAVKSLARDVAAGLLDPSSISAELFSANLDTAGIPDPDLIIRTSG 183
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
E RLS+FLLWQ AYSEF+F+P WPDF A + R+RRFGG+ +
Sbjct: 184 EMRLSNFLLWQAAYSEFLFLPCLWPDFRPADLDAAYETFRQRERRFGGVEPRA 236
>gi|298291818|ref|YP_003693757.1| undecaprenyl diphosphate synthase [Starkeya novella DSM 506]
gi|296928329|gb|ADH89138.1| undecaprenyl diphosphate synthase [Starkeya novella DSM 506]
Length = 255
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 111/233 (47%), Positives = 154/233 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA + GLPR GHR+G E V AA E+GI+ LTI++FS NW R
Sbjct: 22 PRHVAIIMDGNGRWATSHGLPRFEGHRRGAEAVRRTVTAARELGIEALTIYSFSSENWSR 81
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EI +L+ L+K F++ L NN+++R+IG D ++ +L EAE TR NTG+
Sbjct: 82 PEEEIGQLMGLLKRFIRSDLKELHANNVRLRIIGEGHPTDPEVQGLLDEAETLTRANTGV 141
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +AFNY SR+EI+RA ++ + + +G++ D+ + LDT+ +P DL+IRT G
Sbjct: 142 TLTVAFNYGSRNEIARAAQSFARQVAAGTLRPEDITPERFDEALDTAGLPPLDLVIRTSG 201
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
E+RLS+FLLWQ AY+E VF+P +WPDF R AL +Y R+RRFGG+ G
Sbjct: 202 EQRLSNFLLWQAAYAELVFLPVFWPDFDRAWLERALAEYGRRERRFGGVDANG 254
>gi|323165875|gb|EFZ51657.1| di-trans,poly-cis-decaprenylcistransferase [Shigella sonnei 53G]
Length = 252
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 91/239 (38%), Positives = 142/239 (59%), Gaps = 4/239 (1%)
Query: 6 MSSSPP----DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+S P H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++
Sbjct: 8 LSEKLPAHGCRHVAIIMDGNGRWAKKQGRIRAFGHKAGAKSVRRAVSFAANNGIEALTLY 67
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+S L++L L SL ++N+++R+IG+ + + ++++E
Sbjct: 68 AFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSE 127
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T NTGL L IA NY R +I + ++ + + ++ G++ +D ++ +++ ++
Sbjct: 128 ALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAP 187
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRTGGE R+S+FLLWQ+AY+E F WPDF + F ALN + R+RRFGG
Sbjct: 188 VDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGGTE 246
>gi|148982442|ref|ZP_01816757.1| undecaprenyl diphosphate synthase [Vibrionales bacterium SWAT-3]
gi|145960479|gb|EDK25852.1| undecaprenyl diphosphate synthase [Vibrionales bacterium SWAT-3]
Length = 250
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 99/236 (41%), Positives = 157/236 (66%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ S P HI +IMDGNGRWA A+G PR GH+ G++ + +++AA +GIK +T+FAFS
Sbjct: 8 TDSLPKHIAVIMDGNGRWAKAQGKPRVFGHKNGVQAVRKTISSAARLGIKAVTLFAFSSE 67
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+ L++L S L L KNN+++RVIG++ +D + ++EAE T
Sbjct: 68 NWRRPEEEVGILMELFISVLSSEVKKLHKNNLQLRVIGDKSRFNDRLQKKIEEAEALTST 127
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTG+ + IA NY + +I +A+ +I Q ++SG + D+D ++I ++L +D+P+ DL+I
Sbjct: 128 NTGMVINIAANYGGKWDIQQAMTSIAQQVKSGDINVEDIDEAMITQHLTMADIPEVDLLI 187
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE R+S+F+LWQ+AY+E F ++WPDF+ + A+ + R+RRFG ++
Sbjct: 188 RTSGECRISNFMLWQLAYAEMYFTEQFWPDFNEDSLVEAVTWFVNRERRFGCTGEQ 243
>gi|150396354|ref|YP_001326821.1| undecaprenyl pyrophosphate synthase [Sinorhizobium medicae WSM419]
gi|150027869|gb|ABR59986.1| undecaprenyl diphosphate synthase [Sinorhizobium medicae WSM419]
Length = 252
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 123/235 (52%), Positives = 174/235 (74%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
++ P H+ IIMDGNGRWA ARGLPR GHRKG+E V AAE+GI+ LT+FAFS
Sbjct: 11 PANVPAHVAIIMDGNGRWANARGLPRTMGHRKGVEAVRGAVKTAAELGIRYLTLFAFSSE 70
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP +E+S+L+ L+K+F+++ L + N+++RVIG+R +L DIL +L EAE+ T
Sbjct: 71 NWNRPENEVSDLMGLLKAFIRRDLADLHRENVRIRVIGDRSNLSGDILPLLIEAEETTIA 130
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N+G+ + IAFNY +RDE++RA++++ + + +G + ++ I+ +DT+ VPDPDLII
Sbjct: 131 NSGITVIIAFNYGARDELARAMRHLAEHVAAGRLRPDEITPERISATIDTAGVPDPDLII 190
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
RT GE+RLS+FLLWQ AYSE +FIPE WPDF+RE F A+ QY R+RRFGGL++
Sbjct: 191 RTSGEERLSNFLLWQGAYSELLFIPELWPDFTRETFLAAIEQYACRERRFGGLAQ 245
>gi|322517548|ref|ZP_08070417.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
vestibularis ATCC 49124]
gi|322123808|gb|EFX95382.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
vestibularis ATCC 49124]
Length = 249
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 106/235 (45%), Positives = 148/235 (62%), Gaps = 4/235 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P+HIGIIMDGNGRWA R PR GH+ G++ ++ A+++G+K LT++AFS NW
Sbjct: 15 NIPNHIGIIMDGNGRWAKKRLQPRVMGHKAGMDALQKVTIEASQLGVKVLTVYAFSTENW 74
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+ ++ L F K L KNN+++ IG+ L + L L++A +QT+ N+
Sbjct: 75 SRPQDEVKFIMNLPVEFFNKYVPELDKNNVRILTIGDNSRLPKETLDALEKAVEQTKHNS 134
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDL 184
GL L A NY R EI A++ I +++E+G + +D LIAK+L T +P DPDL
Sbjct: 135 GLVLNFALNYGGRAEIVSAVQAIAKEVEAGKLSLEAIDEDLIAKHLMTDKLPYLYRDPDL 194
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IIRT GE RLS+FL WQ AYSEF F +WPDF + A++ YN R RRFGG+
Sbjct: 195 IIRTSGELRLSNFLPWQSAYSEFYFTDVFWPDFDHQGLRQAISDYNKRHRRFGGV 249
>gi|306821647|ref|ZP_07455245.1| di-trans,poly-cis-decaprenylcistransferase [Eubacterium yurii
subsp. margaretiae ATCC 43715]
gi|304550392|gb|EFM38385.1| di-trans,poly-cis-decaprenylcistransferase [Eubacterium yurii
subsp. margaretiae ATCC 43715]
Length = 238
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 102/234 (43%), Positives = 147/234 (62%), Gaps = 4/234 (1%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S+ P HI IIMDGNGRWA R +PR GH+ G ++ IV ++G+K LT++AFS
Sbjct: 9 KSNIPTHIAIIMDGNGRWAKKRLMPRSVGHKAGADMLKRIVRKCNDMGVKYLTVYAFSTE 68
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW+RP E+S L+ LI ++L+K + +NN+++ IG+ L LK+A D T+
Sbjct: 69 NWKRPDEEVSLLMGLIVTYLQKEVKEMNENNVRIGAIGDIEKLPKKAYDELKKAMDITKD 128
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTG+ +A NY RD++S AIKN+ ++ ++ +D + +YL TS +PDPDLII
Sbjct: 129 NTGVVFSLALNYGFRDDLSHAIKNMMKE----NIDIEKIDDETVKRYLYTSYMPDPDLII 184
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RTGGE RLS+F+L++ +YSEF F WP+F E A+ Y RDRRFG +
Sbjct: 185 RTGGEIRLSNFMLYEASYSEFYFCDTLWPEFDEEQLCKAIYDYQQRDRRFGNVK 238
>gi|295706253|ref|YP_003599328.1| undecaprenyl pyrophosphate synthetase [Bacillus megaterium DSM 319]
gi|294803912|gb|ADF40978.1| undecaprenyl pyrophosphate synthetase [Bacillus megaterium DSM 319]
Length = 260
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 103/236 (43%), Positives = 148/236 (62%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P+HI IIMDGNGRWA R LPR GH +G++V + +A E+G+K LT++AF
Sbjct: 25 QVKQHPVPEHIAIIMDGNGRWAQKRALPRMMGHHEGMKVVRHVTRSANELGVKVLTLYAF 84
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP E+ L+KL + FL L + N++VR++G++ L + + A ++
Sbjct: 85 STENWKRPKIEVEFLMKLPEEFLTTFLPELIEKNVQVRIMGDKSELPAHTIRAVDNAIEK 144
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NTGL L A NY SR EI AI+++ +D+E G V S + +L + YL + +PDPD
Sbjct: 145 TKHNTGLILNFALNYGSRHEIMGAIQSLVEDVEQGKVASSSISENLFSSYLMSKSLPDPD 204
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
L+IRT GE RLS+F+LWQ+AY+EF F WPDF A+ + R RRFGG+
Sbjct: 205 LLIRTSGELRLSNFMLWQLAYTEFWFTEVLWPDFKENHLIEAVEAFQKRGRRFGGV 260
>gi|148543922|ref|YP_001271292.1| undecaprenyl pyrophosphate synthetase [Lactobacillus reuteri DSM
20016]
gi|227364831|ref|ZP_03848878.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus reuteri
MM2-3]
gi|325682543|ref|ZP_08162060.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus reuteri
MM4-1A]
gi|148530956|gb|ABQ82955.1| Undecaprenyl pyrophosphate synthetase [Lactobacillus reuteri DSM
20016]
gi|227070094|gb|EEI08470.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus reuteri
MM2-3]
gi|324978382|gb|EGC15332.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus reuteri
MM4-1A]
Length = 270
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 107/242 (44%), Positives = 157/242 (64%), Gaps = 3/242 (1%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P+HI IIMDGNGRWA R LPR AGH++G++ +I AA+E+G+K L+++AF
Sbjct: 29 QLDMERIPNHIAIIMDGNGRWAQKRHLPRVAGHKQGMQTVKKITIAASELGVKVLSLYAF 88
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP SE+S L++L F L K+N+KV V+G+ L + +K+A
Sbjct: 89 STENWKRPSSEVSYLMQLPVRFFSTFVPDLVKHNVKVTVMGDITQLPEATQKAVKDAMAD 148
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV---P 180
T TG+ L A NY SRDEI++A K I +D+++G++ D+D + KYL ++ +
Sbjct: 149 TAHCTGMILNFALNYGSRDEITQAAKKIAEDVQNGNLALADIDEASFGKYLMSTQLGQFA 208
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
+PDL+IRT GE+R+S+F+LWQ+AYSE F+PE+WPDF + A+ Y R RRFGGL
Sbjct: 209 NPDLLIRTSGEERISNFMLWQIAYSELEFVPEHWPDFDEDSLRSAIIAYQGRHRRFGGLK 268
Query: 241 KK 242
+
Sbjct: 269 NQ 270
>gi|95928704|ref|ZP_01311450.1| undecaprenyl diphosphate synthase [Desulfuromonas acetoxidans DSM
684]
gi|95135049|gb|EAT16702.1| undecaprenyl diphosphate synthase [Desulfuromonas acetoxidans DSM
684]
Length = 235
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 100/231 (43%), Positives = 147/231 (63%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P+HI IIMDGNGRWA RGLPR AGH++G+ +V + +GI+ LT++AFS NW
Sbjct: 2 ALPEHIAIIMDGNGRWAQRRGLPRIAGHQQGVSTVRSVVEECSTLGIRYLTLYAFSSENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+ L+ L+ +L L K+ I+ RVIG+ L +I L++ ++T N
Sbjct: 62 SRPDDEVQSLMALLGQYLSSELPLLLKHCIRFRVIGDLSRLPQEIRASLEQTINETSDNP 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL L +A +Y SRDE+ RA++++ D+++G++ D+ + + YLDT +PDPDL+IRT
Sbjct: 122 GLTLTLALSYGSRDEVLRAVRHLASDVKNGNLSEDDISEEVFSGYLDTQGIPDPDLLIRT 181
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE R+S+FLLWQ+AY+E F WPDF+ AL + R RRFG +
Sbjct: 182 SGEMRISNFLLWQLAYTELYFCSCLWPDFTVVELKEALADFESRIRRFGAV 232
>gi|160871999|ref|ZP_02062131.1| di-trans,poly-cis-decaprenylcistransferase [Rickettsiella grylli]
gi|159120798|gb|EDP46136.1| di-trans,poly-cis-decaprenylcistransferase [Rickettsiella grylli]
Length = 252
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 93/234 (39%), Positives = 146/234 (62%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HI IIMDGNGRWA R LPR GH++G++ +++ + +E+GIK LT+FAFS NW
Sbjct: 11 KLPQHIAIIMDGNGRWAKQRHLPRMLGHQEGVKAVRKVIKSCSEMGIKALTLFAFSSENW 70
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP E++ L+ L + LK L +NN++++++GN + + + +++ T NT
Sbjct: 71 QRPEQEVNYLMTLFLNTLKNEIEKLAQNNVQLKMVGNLERFNAPLRQWIDKSQALTAHNT 130
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL L IA NYS + +I +A + + +++ G+ + + + A YL + +P DL+IRT
Sbjct: 131 GLQLIIAVNYSGQWDIVQAAQKLIDEVKHGAFIADQLTQEMFANYLSLAHLPALDLLIRT 190
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE R+S+FLLWQ+AY+E F WPDF + AL+ Y R+RRFG S++
Sbjct: 191 SGEYRISNFLLWQLAYTELYFTDTLWPDFDEQALQKALHFYAQRERRFGCTSEQ 244
>gi|182677296|ref|YP_001831442.1| undecaprenyl diphosphate synthase [Beijerinckia indica subsp.
indica ATCC 9039]
gi|182633179|gb|ACB93953.1| undecaprenyl diphosphate synthase [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 266
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 117/236 (49%), Positives = 165/236 (69%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
++ P H+G+IMDGNGRWAAARGLPR GHR+G+E V AA + G+ LT+++FS+
Sbjct: 18 RAADVPAHVGVIMDGNGRWAAARGLPRLEGHRRGVEALRATVRAALDFGLDYLTVYSFSV 77
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP+ E+++L+ L+K F++ L K +++V++IG R L DI +L EAED TR
Sbjct: 78 ENWSRPIEEVTDLMGLLKRFIRHDLRDLHKAHVRVKIIGAREPLQPDIRALLDEAEDLTR 137
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N L L +AFNY SR EI+ A + I + G + D++ L A YLDT+ +PDPDLI
Sbjct: 138 DNDRLTLVVAFNYGSRQEIAGAARAIAHKVAEGLLQPEDINEHLFASYLDTAGIPDPDLI 197
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
IRT GE+RLS+FL+WQ AY+EFVF+P +WPDF+++ F AL ++ R+RRFGG+S
Sbjct: 198 IRTSGEQRLSNFLMWQAAYAEFVFLPMHWPDFNQQAFAAALTEFATRERRFGGVSA 253
>gi|156935311|ref|YP_001439227.1| undecaprenyl pyrophosphate synthase [Cronobacter sakazakii ATCC
BAA-894]
gi|156533565|gb|ABU78391.1| hypothetical protein ESA_03168 [Cronobacter sakazakii ATCC BAA-894]
Length = 252
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 95/242 (39%), Positives = 142/242 (58%), Gaps = 4/242 (1%)
Query: 6 MSSSPP----DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+S + P H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++
Sbjct: 8 LSENLPAHGARHVAIIMDGNGRWAKRQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY 67
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+S L++L L SL ++N+++RVIG+ + + + +AE
Sbjct: 68 AFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRVIGDISRFNTRLQDRIHKAE 127
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T NTGL L IA NY R +I + ++ + ++ G + +D +++K + ++
Sbjct: 128 ALTSQNTGLTLNIAANYGGRWDIIQGVQQLAAQVQEGLLRPDQIDEEMLSKQICMHELAP 187
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRTGGE R+S+FLLWQ+AY+E F WPDF + F ALN + R+RRFGG +
Sbjct: 188 VDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGGTAP 247
Query: 242 KG 243
G
Sbjct: 248 GG 249
>gi|170768663|ref|ZP_02903116.1| di-trans, poly-cis-decaprenylcistransferase [Escherichia albertii
TW07627]
gi|170122767|gb|EDS91698.1| di-trans, poly-cis-decaprenylcistransferase [Escherichia albertii
TW07627]
Length = 253
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 89/229 (38%), Positives = 139/229 (60%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++AFS NW RP
Sbjct: 19 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRP 78
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E+S L++L L SL ++N+++R+IG+ + + ++++E T NTGL
Sbjct: 79 AQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLT 138
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L IA NY R +I + ++ + + ++ G++ +D ++ +++ ++ DL+IRTGGE
Sbjct: 139 LNIAANYGGRWDIVQGVRQLAEKVQQGNLQPAQIDEDMLNQHVCMHELAPVDLVIRTGGE 198
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
R+S+FLLWQ+AY+E F WPDF + F ALN + R+RRFGG
Sbjct: 199 HRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGGTE 247
>gi|221133310|ref|ZP_03559615.1| undecaprenyl diphosphate synthase [Glaciecola sp. HTCC2999]
Length = 251
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 99/234 (42%), Positives = 140/234 (59%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P+H+ IIMDGNGRWA +G R GH+ G+E V A I LT+FAFS NW
Sbjct: 16 KMPEHVAIIMDGNGRWAKQKGKLRTFGHKAGVESVRASVRFARTHKITALTLFAFSSENW 75
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP E+S L+KL K L L N ++++V+G+ D ++ +K+AE T+ NT
Sbjct: 76 KRPQDEVSVLMKLFKLVLTSEVKKLHANGVRLKVVGDLSPFDPKLVQKIKDAEALTQHNT 135
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
L+L IA NY R +I A +++ Q + SG + D++ + +D+P DL+IRT
Sbjct: 136 ELHLNIAANYGGRWDIVNAAQSLAQQVASGKLNPEDINETSFNANTAFADLPALDLLIRT 195
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GGEKR+S+FLLWQ AYSEF F WPDF+ F A+ +N R RRFG +S++
Sbjct: 196 GGEKRISNFLLWQCAYSEFYFTDTLWPDFNENSFLDAVISFNERQRRFGKISEQ 249
>gi|74310794|ref|YP_309213.1| undecaprenyl pyrophosphate synthase [Shigella sonnei Ss046]
gi|73854271|gb|AAZ86978.1| conserved hypothetical protein [Shigella sonnei Ss046]
Length = 253
Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats.
Identities = 91/239 (38%), Positives = 142/239 (59%), Gaps = 4/239 (1%)
Query: 6 MSSSPP----DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+S P H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++
Sbjct: 9 LSEKLPAHGCRHVAIIMDGNGRWAKKQGRIRAFGHKAGAKSVRRAVSFAANNGIEALTLY 68
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+S L++L L SL ++N+++R+IG+ + + ++++E
Sbjct: 69 AFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSE 128
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T NTGL L IA NY R +I + ++ + + ++ G++ +D ++ +++ ++
Sbjct: 129 ALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAP 188
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRTGGE R+S+FLLWQ+AY+E F WPDF + F ALN + R+RRFGG
Sbjct: 189 VDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGGTE 247
>gi|323484221|ref|ZP_08089590.1| hypothetical protein HMPREF9474_01341 [Clostridium symbiosum
WAL-14163]
gi|323692103|ref|ZP_08106350.1| undecaprenyl diphosphate synthase [Clostridium symbiosum WAL-14673]
gi|323402463|gb|EGA94792.1| hypothetical protein HMPREF9474_01341 [Clostridium symbiosum
WAL-14163]
gi|323503903|gb|EGB19718.1| undecaprenyl diphosphate synthase [Clostridium symbiosum WAL-14673]
Length = 246
Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats.
Identities = 111/231 (48%), Positives = 156/231 (67%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P+H+ +I+DGNGRWA RGLPR AGH++G + V AA +GIK LT++ FS NW+
Sbjct: 16 IPEHVALILDGNGRWAKKRGLPRTAGHKQGCVTVEQTVEDAARLGIKYLTVYGFSTENWK 75
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R V E+ L++L + +LK+ K NN++V++IG+R D DI+ + E +T+ NTG
Sbjct: 76 RSVEEVGALMQLFRYYLKRLLKIAKSNNVRVKMIGDRTRFDRDIIEGIDTLERETKNNTG 135
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ IA NY RDEI+RAI+ + D + G + S V +++ YLDT+D+PDPDL+IRT
Sbjct: 136 MTFVIAVNYGGRDEITRAIRRMTADCKEGRLDSGSVTEQVVSSYLDTADIPDPDLLIRTS 195
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
GE RLS++LLWQ+AYSE V WPDF++E A+ QYN RDRRFGG+
Sbjct: 196 GEIRLSNYLLWQLAYSEIVVTDCLWPDFNKEELLKAIAQYNKRDRRFGGVK 246
>gi|172037217|ref|YP_001803718.1| undecaprenyl pyrophosphate synthetase [Cyanothece sp. ATCC 51142]
gi|171698671|gb|ACB51652.1| undecaprenyl pyrophosphate synthetase [Cyanothece sp. ATCC 51142]
Length = 250
Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats.
Identities = 96/232 (41%), Positives = 141/232 (60%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ +IMDGNGRWA +GLPR AGHR+G + +++ +GIK LT +AFS NWR
Sbjct: 17 LPQHVAVIMDGNGRWAMEKGLPRVAGHRQGAKTLKKLLRCCHRLGIKELTAYAFSTENWR 76
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP+ EI L+ L + L + L + N+++ IG+ L + ++ + ++T N
Sbjct: 77 RPLEEIDFLMLLFEQLLIQELEQLHEQNVRISFIGDLSILPKSLQEIIHHSMEKTINNQT 136
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
++ +A NY R EI A + I Q + G++ +D ++ +YL TS DPDL+IRT
Sbjct: 137 IHFRVAINYGGRQEIVNACRQIVQQVNQGNLTLETIDEAVFKQYLYTSGAKDPDLLIRTS 196
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
GE RLS++LLWQ+AY+E F WPDF F+ AL+ Y R+RRFGGL+K
Sbjct: 197 GEMRLSNYLLWQMAYTEIYFTEVLWPDFKTAQFYDALSHYQQRNRRFGGLTK 248
>gi|332877974|ref|ZP_08445705.1| di-trans,poly-cis-decaprenylcistransferase [Capnocytophaga sp. oral
taxon 329 str. F0087]
gi|332684078|gb|EGJ56944.1| di-trans,poly-cis-decaprenylcistransferase [Capnocytophaga sp. oral
taxon 329 str. F0087]
Length = 240
Score = 292 bits (748), Expect = 3e-77, Method: Composition-based stats.
Identities = 94/232 (40%), Positives = 142/232 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA +GL R GH KG + +++ E I LT++AFS NW R
Sbjct: 7 PEHLAIIMDGNGRWAKKQGLLRALGHEKGGQSVRQVLEYCVEHHIPYLTLYAFSTENWNR 66
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L+ FL+K L KNN+++ +IGN + + L D+ + NTG
Sbjct: 67 PALEVKALMELLVKFLRKEADELDKNNVRLNMIGNLERFPEKVKNTLVGVIDRLKHNTGT 126
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y +R+E+ IK I Q +E + ++ +I ++L T D+P+ DL+IRT G
Sbjct: 127 TLTLALSYGAREELLTTIKRIAQQVEQQQLKVDAINEDIIQQHLYTYDLPNVDLLIRTSG 186
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ+AY+E F WPDF+++ AL Y R+RRFG +S++
Sbjct: 187 EYRISNFLLWQIAYAELYFTDVLWPDFTKKHLEEALISYQNRERRFGKISEQ 238
>gi|306825928|ref|ZP_07459266.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sp. oral
taxon 071 str. 73H25AP]
gi|304431860|gb|EFM34838.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sp. oral
taxon 071 str. 73H25AP]
Length = 252
Score = 292 bits (748), Expect = 3e-77, Method: Composition-based stats.
Identities = 107/238 (44%), Positives = 139/238 (58%), Gaps = 4/238 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ P+HIGIIMDGNGRWA R PR GH+ G+E ++ AA ++G+K +T++AFS
Sbjct: 15 VPRQVPNHIGIIMDGNGRWAKRRMQPRVFGHKAGMESLQKVTKAANKLGVKVITVYAFST 74
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+ ++ L F L NN+K+++IG L LK+AE+ T+
Sbjct: 75 ENWTRPDQEVKFIMNLPVEFYDNYVPELHANNVKIQMIGETDRLPKPTFEALKKAEELTK 134
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----D 181
NTGL L A NY R EI++A+K I QD+ + D+ LI YL T +P D
Sbjct: 135 NNTGLILNFALNYGGRAEITQAVKLISQDVLDAKINPGDITEELIGNYLFTQHLPKDVRD 194
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDLIIRT GE RLS+FL WQ AYSE F WPDF E A+ YN R RRFGG+
Sbjct: 195 PDLIIRTSGELRLSNFLPWQGAYSELYFTDTLWPDFDEEALQEAILAYNRRHRRFGGV 252
>gi|37519677|ref|NP_923054.1| undecaprenyl pyrophosphate synthetase [Gloeobacter violaceus PCC
7421]
gi|42559749|sp|Q7NPE7|UPPS_GLOVI RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|35210668|dbj|BAC88049.1| undecaprenyl pyrophosphate synthetase [Gloeobacter violaceus PCC
7421]
Length = 249
Score = 292 bits (748), Expect = 3e-77, Method: Composition-based stats.
Identities = 88/239 (36%), Positives = 132/239 (55%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + + P H+ IMDGNGRWA+ R LPR GH+ G+ E++ + GI LT+
Sbjct: 11 LPSDLDPNRLPRHVAAIMDGNGRWASKRNLPRVMGHQAGVSALKELLRCCKDWGIGALTV 70
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E+ L+ L + L + +++R +G L + ++ A
Sbjct: 71 YAFSTENWKRPQYEVEFLMALFEKVLNHELSEMVDEGVRIRFVGALAHLPGALQSAIEGA 130
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
T NT + +A NY R EI A + + + + SG + +D L A++L T ++
Sbjct: 131 MAATEANTAVEFTVATNYGGRQEIVNACRELAEQVRSGRLLPEQIDEKLFAQHLYTRELS 190
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRT GE+RLS++LLWQ+AY+E WPDF R F AL Y R RRFG +
Sbjct: 191 DPDLLIRTSGEQRLSNYLLWQMAYTEIYVADVLWPDFDRAAFHAALQSYQGRQRRFGKV 249
>gi|167854831|ref|ZP_02477608.1| undecaprenyl pyrophosphate synthetase [Haemophilus parasuis 29755]
gi|167854010|gb|EDS25247.1| undecaprenyl pyrophosphate synthetase [Haemophilus parasuis 29755]
Length = 237
Score = 292 bits (748), Expect = 3e-77, Method: Composition-based stats.
Identities = 100/236 (42%), Positives = 138/236 (58%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
++ + P H+ IIMDGNGRWA RG R GHRKG++ + V A GIK LT++A
Sbjct: 1 MNIDLQNMPQHVAIIMDGNGRWAKQRGKLRVFGHRKGVKAVHSAVNFALTQGIKVLTLYA 60
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RP EI+ L+ L L L NNI++++IG++ + + + ++ AE
Sbjct: 61 FSSENWSRPKLEIAALMTLFIETLDLNIKKLHSNNIRLKIIGDKTAFSEALQEKIELAEQ 120
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NT L L IA NY + +I +A K I I++ + D+ + L T D P
Sbjct: 121 LTNKNTALTLNIAANYGGQWDIVQATKRIAHQIKNNVIPIEDITTDYFQHNLSTEDQPQV 180
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DL+IRT GE+R+S+FLLWQ+AY+E VF P WPDF + F A+ Y RDRRFGG
Sbjct: 181 DLLIRTSGEQRISNFLLWQIAYAELVFSPVLWPDFDEKAFTDAVIAYQQRDRRFGG 236
>gi|223940470|ref|ZP_03632321.1| undecaprenyl diphosphate synthase [bacterium Ellin514]
gi|223890873|gb|EEF57383.1| undecaprenyl diphosphate synthase [bacterium Ellin514]
Length = 245
Score = 292 bits (748), Expect = 3e-77, Method: Composition-based stats.
Identities = 100/238 (42%), Positives = 148/238 (62%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
++ ++ P H+ +IMDGNGRWA RGLPR GHR G E I+ A E+GIK LT++
Sbjct: 8 LSDEAKANLPRHVAMIMDGNGRWAKQRGLPRVEGHRIGAESVRAIIRTAGELGIKYLTLY 67
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS+ NW RP E+ L+K + ++K F L K+N+++ VIG L + + LK+ +
Sbjct: 68 AFSVENWNRPKDEVDTLMKYLARYMKSEFAELNKSNVRLEVIGQIHRLPEFVQKQLKKTQ 127
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ N GL L +A +Y R EI A+++I + G + +++ ++A +L T + PD
Sbjct: 128 EGLSKNNGLTLIMALSYGGRTEIVEAVRSIAAKAKKGELDPAEINEQVVADHLYTRNWPD 187
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PD++IRT GE R+S+FLLWQ++YSE V WPDF + F+ AL +Y R RRFGGL
Sbjct: 188 PDVLIRTSGEMRVSNFLLWQISYSELVVTQTLWPDFRKPQFYEALEEYTRRHRRFGGL 245
>gi|163747133|ref|ZP_02154489.1| undecaprenyl diphosphate synthase [Oceanibulbus indolifex HEL-45]
gi|161379694|gb|EDQ04107.1| undecaprenyl diphosphate synthase [Oceanibulbus indolifex HEL-45]
Length = 245
Score = 292 bits (748), Expect = 3e-77, Method: Composition-based stats.
Identities = 112/230 (48%), Positives = 147/230 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG PR GH G + EIV A +VG++ LTIFAFS NW+R
Sbjct: 15 PRHVAIIMDGNGRWATQRGRPRLFGHHAGAKRVREIVEACPDVGVEYLTIFAFSTENWKR 74
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E++ L+ L + ++ K SL + +VR IG+R LDD ++ ++ E ED T NT +
Sbjct: 75 TQVEVAGLMSLFRRYISKEMRSLSEYGARVRFIGDRDRLDDKLIKLMGELEDHTAHNTRI 134
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL IA NY RDE++RA + QD+ SG + VD + +YLDT +PDPDL+IRT G
Sbjct: 135 NLTIALNYGGRDEVARATHRLAQDVASGKLDPDSVDEETLPRYLDTHVLPDPDLVIRTSG 194
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E R+S+FLLWQ AY+E+ FI WPDF+RE F Y RDRRFG +
Sbjct: 195 EARISNFLLWQSAYAEYEFIDTLWPDFTREEFARLCAAYGGRDRRFGAVK 244
>gi|227082380|ref|YP_002810931.1| undecaprenyl diphosphate synthase [Vibrio cholerae M66-2]
gi|298500369|ref|ZP_07010174.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae MAK
757]
gi|227010268|gb|ACP06480.1| undecaprenyl diphosphate synthase [Vibrio cholerae M66-2]
gi|297541062|gb|EFH77116.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae MAK
757]
Length = 256
Score = 292 bits (748), Expect = 3e-77, Method: Composition-based stats.
Identities = 91/239 (38%), Positives = 145/239 (60%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S+ P HI +IMDGNGRWA A+G PR GH+ G+ + ++ +A +GIK +T+FAF
Sbjct: 11 SLSQDVLPKHIAVIMDGNGRWAKAQGKPRVFGHKNGVAAVRKTISTSARLGIKAVTLFAF 70
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S N RRP E+ L++L + L L KNN+++RVIG++ + + + +AE
Sbjct: 71 SSENRRRPEEEVGVLMELFMTVLSTEIKKLHKNNLRLRVIGDKSRFSERLQTKIAQAEQL 130
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NTG+ + IA NY + +I +A + + + + G + D+D + ++L +D+PD D
Sbjct: 131 TASNTGMVVNIAANYGGQWDILQATQALAEKVTQGELQPSDIDEDVFKQHLTMADLPDVD 190
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRT GE R+S+F+LWQ+AY+E F P +WP+F A+ + R+RRFG ++
Sbjct: 191 LLIRTSGECRISNFMLWQLAYAEMYFTPVFWPEFDENCLIEAVTWFVNRERRFGCTGEQ 249
>gi|256847042|ref|ZP_05552488.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus
coleohominis 101-4-CHN]
gi|256715706|gb|EEU30681.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus
coleohominis 101-4-CHN]
Length = 255
Score = 292 bits (748), Expect = 3e-77, Method: Composition-based stats.
Identities = 107/243 (44%), Positives = 157/243 (64%), Gaps = 3/243 (1%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ + + P HI IIMDGNGRWA AR LPR AGH++G+E ++ AA+++G+K L+++A
Sbjct: 13 SQIDLAKIPHHIAIIMDGNGRWAQARHLPRVAGHQQGMETVKKVTIAASKLGVKVLSLYA 72
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW+RP SE+S L+ L F K L ++N++V V+G+ L + ++ A
Sbjct: 73 FSTENWKRPQSEVSFLMNLPIKFFTKFVPDLVEHNVRVTVMGDITKLPEKTRIAVRNAIH 132
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP-- 180
T TG+ L A NY RDEI RA ++ +D++ G + S D+ +++YL T+ +
Sbjct: 133 DTEQCTGMVLNFALNYGGRDEIVRATTDMVKDVQDGKLSSMDITEKTMSQYLMTAPLTPY 192
Query: 181 -DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DP+L+IRT GE+RLS+F+LWQVAYSEFVF+ E+WPDF E A++ + R RRFGGL
Sbjct: 193 EDPELLIRTSGEQRLSNFMLWQVAYSEFVFMDEHWPDFDGESLKKAISIFQHRHRRFGGL 252
Query: 240 SKK 242
K
Sbjct: 253 KNK 255
>gi|229918659|ref|YP_002887305.1| undecaprenyl diphosphate synthase [Exiguobacterium sp. AT1b]
gi|229470088|gb|ACQ71860.1| undecaprenyl diphosphate synthase [Exiguobacterium sp. AT1b]
Length = 245
Score = 292 bits (748), Expect = 3e-77, Method: Composition-based stats.
Identities = 113/231 (48%), Positives = 152/231 (65%), Gaps = 1/231 (0%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P+H+ IIMDGNGRWA RGLPR GHR+G++ E V A E+GI++LT++AFS NW
Sbjct: 16 SVPEHVAIIMDGNGRWAKKRGLPRIMGHREGMKSIREAVRTAQELGIRSLTLYAFSTENW 75
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+S L+KL K FL+ L + N++V V G+ L + + EA ++T NT
Sbjct: 76 TRPEEEVSFLMKLPKQFLETDLKELHEQNVRVLVAGDTSKLPRETREAVDEARERTVANT 135
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GLNL A NY RDE+ +A+++I D++SGSV + D+D +I + L T D DL+IRT
Sbjct: 136 GLNLVFALNYGGRDELVQAMRSIAVDVQSGSVRADDIDDRMIGERLMTHVQ-DVDLVIRT 194
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE+RLS+FLLWQ AY+E F WP+F RE F A+ YN R RRFGG+
Sbjct: 195 SGEQRLSNFLLWQSAYAELHFTEVLWPEFKREHFVEAIESYNARTRRFGGV 245
>gi|300728299|ref|ZP_07061665.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella bryantii
B14]
gi|299774411|gb|EFI71037.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella bryantii
B14]
Length = 256
Score = 292 bits (748), Expect = 3e-77, Method: Composition-based stats.
Identities = 94/246 (38%), Positives = 143/246 (58%), Gaps = 6/246 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + + P+HI IIMDGNGRWAA RG R GH+ G++ I + +G+K LT+
Sbjct: 1 MTKELDMNRIPEHIAIIMDGNGRWAAERGKDRSYGHQAGVDAVRRITSECTRLGVKYLTL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW RP +EI+ L+ L+ + L+ KNN++ VIG+ L + + LKE
Sbjct: 61 YTFSTENWNRPETEIAALMGLVLTSLEDEI--FMKNNVRFLVIGDMERLPEKVQEKLKET 118
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVD----SSLIAKYLDT 176
T NT + + +A +YSSR EI++A + I ++ D++ + ++++T
Sbjct: 119 MAHTANNTTMTMVVALSYSSRWEITKACREIAIEMVKQGKSIEDINSLITEDTLTEHMET 178
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
+PDP+L+IRTGGE R+S++LLWQ+AY+E F YWPDFS + A+ Y R RRF
Sbjct: 179 KFMPDPELLIRTGGELRISNYLLWQIAYTELYFCDTYWPDFSEDDLHRAIISYQSRQRRF 238
Query: 237 GGLSKK 242
G +
Sbjct: 239 GKTEAQ 244
>gi|227890627|ref|ZP_04008432.1| di-trans-poly-cis-decaprenylcistransferase [Lactobacillus
salivarius ATCC 11741]
gi|301300278|ref|ZP_07206487.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus
salivarius ACS-116-V-Col5a]
gi|227867565|gb|EEJ74986.1| di-trans-poly-cis-decaprenylcistransferase [Lactobacillus
salivarius ATCC 11741]
gi|300214369|gb|ADJ78785.1| Undecaprenyl pyrophosphate synthetase [Lactobacillus salivarius
CECT 5713]
gi|300852119|gb|EFK79794.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus
salivarius ACS-116-V-Col5a]
Length = 260
Score = 292 bits (748), Expect = 3e-77, Method: Composition-based stats.
Identities = 98/242 (40%), Positives = 139/242 (57%), Gaps = 3/242 (1%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P+HI IIMDGNGRWA R LPR AGH++G+E I A+ +G+K LT++AF
Sbjct: 17 KLKRELIPNHIAIIMDGNGRWAKKRHLPRIAGHKQGMETVKNITKVASNLGVKVLTLYAF 76
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP E+ L+ L F L +NN++V V+G L + +A +Q
Sbjct: 77 STENWKRPDKEVDFLMDLPVKFFNTFVPELIENNVRVNVMGYIDMLPKKTQKAVYDAIEQ 136
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT---SDVP 180
T TG+ L A NY R E+ AI++I ++ + + ++ L T +
Sbjct: 137 TSNCTGMILNFALNYGGRAELVSAIQSIASEVSENKLEIEKITEKVVDANLMTGKLAPYN 196
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GE+R+S+FLLWQ+AYSEFVF WPD+S E + + RDRRFGGL
Sbjct: 197 DPDLLIRTSGEERISNFLLWQLAYSEFVFTDTLWPDYSEEDLLANIYTFQTRDRRFGGLK 256
Query: 241 KK 242
++
Sbjct: 257 EE 258
>gi|313891152|ref|ZP_07824771.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pseudoporcinus SPIN 20026]
gi|313120515|gb|EFR43635.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pseudoporcinus SPIN 20026]
Length = 249
Score = 292 bits (748), Expect = 3e-77, Method: Composition-based stats.
Identities = 108/240 (45%), Positives = 142/240 (59%), Gaps = 4/240 (1%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P HIGIIMDGNGRWA R PR GH+ G++ E+ A++ G+K LT++AF
Sbjct: 10 EVKLEKIPKHIGIIMDGNGRWAKKRLKPRVFGHKAGMDALQEVTLTASKYGVKVLTVYAF 69
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP E+ ++ L F K L KNN+++++IG L + L LK A +
Sbjct: 70 STENWARPQDEVKFIMNLPVEFFDKYVPELNKNNVRIQMIGETHRLPAETLNALKRAIET 129
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP--- 180
TR N+GL L A NY R EI+ A++ I QD+ ++ D+ LIA YL T +P
Sbjct: 130 TRKNSGLVLNFALNYGGRAEITSAVRMIAQDVLDANLNPGDITEELIANYLMTDHLPYLY 189
Query: 181 -DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+PDLIIRT GE RLS+FL WQ AYSEF F WPDF R F AL +Y+ R RRFG +
Sbjct: 190 RNPDLIIRTSGELRLSNFLPWQSAYSEFYFTSVLWPDFKRAEFIKALEEYSRRQRRFGKV 249
>gi|158334147|ref|YP_001515319.1| undecaprenyl pyrophosphate synthase [Acaryochloris marina
MBIC11017]
gi|158304388|gb|ABW26005.1| undecaprenyl diphosphate synthase [Acaryochloris marina MBIC11017]
Length = 255
Score = 292 bits (748), Expect = 3e-77, Method: Composition-based stats.
Identities = 94/236 (39%), Positives = 141/236 (59%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P H+ +IMDGNGRWA +G PR AGHR+G ++V + GI LT +AFS
Sbjct: 13 LDPDCLPQHVAVIMDGNGRWAKRQGFPRIAGHRQGARTLKDLVRCCKDWGIPTLTAYAFS 72
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRRP+ E+ L+ L + L++ + + +++ IG+ L + + A T
Sbjct: 73 TENWRRPLEEVDFLLVLFERLLRQELAEMDREGVRISFIGDLSPLPSSLRKEIDRAVLAT 132
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N ++ +A NY SR E+++A + I + ++ G++ VD LI +YL T+ PDPDL
Sbjct: 133 ANNRAVHFNVAVNYGSRAELTQACRQIAEQVQLGNIEPGAVDEQLIEQYLYTAGTPDPDL 192
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
+IR+ GE RLS++LLWQ+AY+EF F +WPDF R +F AL Y +RDRRFG +
Sbjct: 193 LIRSSGELRLSNYLLWQLAYTEFYFTDVFWPDFDRAVFHEALQHYQMRDRRFGTVK 248
>gi|51892634|ref|YP_075325.1| undecaprenyl pyrophosphate synthase [Symbiobacterium thermophilum
IAM 14863]
gi|51856323|dbj|BAD40481.1| undecaprenyl pyrophosphate synthase [Symbiobacterium thermophilum
IAM 14863]
Length = 256
Score = 292 bits (747), Expect = 3e-77, Method: Composition-based stats.
Identities = 99/229 (43%), Positives = 139/229 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RGLPR GH G+E +V AA ++GIK LT +AFS NW+R
Sbjct: 28 PRHVAIIMDGNGRWALRRGLPRTVGHCAGVEALRGVVKAAPDLGIKILTCYAFSTENWKR 87
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L+ + + +L +N +++ IG L + A TR N L
Sbjct: 88 PKDEVDTLMSLLLEYCRLEAENLHRNGVRINAIGRIHELPPAQQQEIARAVALTRGNDRL 147
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY + E+ A +++ +++SG + +D+ ++ ++L T+D+PDPDLIIRT G
Sbjct: 148 ILNLAVNYGGQAELVDAFRSLAAEVQSGRLAPEAIDAEVVRRHLYTADLPDPDLIIRTAG 207
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+FLLWQ AY+E YWPDF+RE AL Y R+RRFG L
Sbjct: 208 EMRLSNFLLWQSAYAEIWVTDVYWPDFTREHLEQALRDYARRERRFGAL 256
>gi|114331997|ref|YP_748219.1| undecaprenyl diphosphate synthase [Nitrosomonas eutropha C91]
gi|114309011|gb|ABI60254.1| Undecaprenyl pyrophosphate synthetase [Nitrosomonas eutropha C91]
Length = 263
Score = 292 bits (747), Expect = 3e-77, Method: Composition-based stats.
Identities = 98/236 (41%), Positives = 141/236 (59%), Gaps = 3/236 (1%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ P HI IIMDGNGRWA R LPR AGH +G+E + A E G+ LT+FAFS
Sbjct: 14 TGMIPKHIAIIMDGNGRWAKQRYLPRIAGHTQGVEAVRGTIKACIERGVPYLTVFAFSSE 73
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+ L++L + L++ SL +N ++ RVIG+ D ++ ++ E T
Sbjct: 74 NWRRPAEEVKLLMQLFLAALEREVTSLHENGVRFRVIGDLSKFDPRVIECVRHGEMLTAG 133
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NT L+ +A NY R +I +A++ + S + D + S +++YL +D P+PDL I
Sbjct: 134 NTRLHFTVAANYGGRWDIMQAVRKMI---AQRSDSTMDFNESDLSRYLTMADAPEPDLFI 190
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE R+S+FLLWQ+AY+E F WPDF+ A+ Y R+RRFG S++
Sbjct: 191 RTGGECRISNFLLWQLAYTELYFTDTLWPDFNVSTLDKAILSYQKRERRFGQTSEQ 246
>gi|322377191|ref|ZP_08051683.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sp. M334]
gi|321281904|gb|EFX58912.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sp. M334]
Length = 252
Score = 292 bits (747), Expect = 3e-77, Method: Composition-based stats.
Identities = 105/238 (44%), Positives = 136/238 (57%), Gaps = 4/238 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ + P HIGIIMDGNGRWA R PR GH+ G+E + AA ++G+K +T++AFS
Sbjct: 15 VPTQVPAHIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQTVTKAANKLGVKVITVYAFST 74
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+ ++ L F L NN+K+++IG L L +AE+ T+
Sbjct: 75 ENWTRPDQEVKFIMNLPVEFYDNYVPELHANNVKIQMIGETDRLPKQTFEALTKAEELTK 134
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----D 181
NTGL L A NY R EI++A+K I QD+ + D+ LI YL T +P D
Sbjct: 135 NNTGLILNFALNYGGRAEITQALKLISQDVLDAKINPGDITEELIGNYLFTQHLPKDVRD 194
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDLIIRT GE RLS+FL WQ AYSE F WPDF A+ YN R RRFGG+
Sbjct: 195 PDLIIRTSGELRLSNFLPWQGAYSELYFTDTLWPDFDEVALQEAILAYNRRHRRFGGV 252
>gi|293364309|ref|ZP_06611035.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus oralis
ATCC 35037]
gi|307702725|ref|ZP_07639677.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus oralis
ATCC 35037]
gi|291317155|gb|EFE57582.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus oralis
ATCC 35037]
gi|307623841|gb|EFO02826.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus oralis
ATCC 35037]
Length = 252
Score = 292 bits (747), Expect = 3e-77, Method: Composition-based stats.
Identities = 104/238 (43%), Positives = 140/238 (58%), Gaps = 4/238 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ + P HIGIIMDGNGRWA R PR GH+ G+E +I AA ++G+K +T++AFS
Sbjct: 15 VPTQVPAHIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQKITKAANKMGVKVITVYAFST 74
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+ ++ L F L NN+K+++IG L LK+AE+ T+
Sbjct: 75 ENWTRPDQEVKFIMNLPVEFYDNYVPELHANNVKIQMIGETDRLPKPTFEALKKAEELTK 134
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----D 181
NTGL L A NY R EI++A+K++ QD+ + D+ +I YL T +P D
Sbjct: 135 NNTGLILNFALNYGGRAEITQALKSLAQDVLDAKINPGDITEDMIGDYLFTQHLPKDLRD 194
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDLIIRT GE RLS+FL WQ AYSE F WPDF A+ +N R+RRFGG+
Sbjct: 195 PDLIIRTSGELRLSNFLPWQAAYSELYFTDTLWPDFDEAALQEAIAAFNHRNRRFGGV 252
>gi|184153318|ref|YP_001841659.1| undecaprenyl diphosphate synthase [Lactobacillus reuteri JCM 1112]
gi|183224662|dbj|BAG25179.1| undecaprenyl diphosphate synthase [Lactobacillus reuteri JCM 1112]
Length = 259
Score = 292 bits (747), Expect = 3e-77, Method: Composition-based stats.
Identities = 107/242 (44%), Positives = 157/242 (64%), Gaps = 3/242 (1%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P+HI IIMDGNGRWA R LPR AGH++G++ +I AA+E+G+K L+++AF
Sbjct: 18 QLDMERIPNHIAIIMDGNGRWAQKRHLPRVAGHKQGMQTVKKITIAASELGVKVLSLYAF 77
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP SE+S L++L F L K+N+KV V+G+ L + +K+A
Sbjct: 78 STENWKRPSSEVSYLMQLPVRFFSTFVPDLVKHNVKVTVMGDITQLPEATQKAVKDAMAD 137
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV---P 180
T TG+ L A NY SRDEI++A K I +D+++G++ D+D + KYL ++ +
Sbjct: 138 TAHCTGMILNFALNYGSRDEITQAAKKIAEDVQNGNLALADIDEASFGKYLMSTQLGQFA 197
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
+PDL+IRT GE+R+S+F+LWQ+AYSE F+PE+WPDF + A+ Y R RRFGGL
Sbjct: 198 NPDLLIRTSGEERISNFMLWQIAYSELEFVPEHWPDFDEDSLRSAIIAYQGRHRRFGGLK 257
Query: 241 KK 242
+
Sbjct: 258 NQ 259
>gi|322388630|ref|ZP_08062230.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus infantis
ATCC 700779]
gi|321140550|gb|EFX36055.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus infantis
ATCC 700779]
Length = 250
Score = 292 bits (747), Expect = 3e-77, Method: Composition-based stats.
Identities = 107/234 (45%), Positives = 142/234 (60%), Gaps = 4/234 (1%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HIG+IMDGNGRWA R PR GH+ G++ + AA+++G+K LT++AFS NW
Sbjct: 17 VPAHIGVIMDGNGRWAKKRMQPRVFGHKAGMDALRTVAIAASDMGVKALTVYAFSTENWT 76
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ ++ L F K L + N+K+++IG L + LK+AE T+LNTG
Sbjct: 77 RPDQEVKFIMNLPVEFYDKYVPELHQKNMKIQMIGETDRLPNQTFEALKKAEKLTKLNTG 136
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLI 185
L L A NY R EI++A+K I QD+ V D+ LI +YL T +P DPDLI
Sbjct: 137 LILNFALNYGGRAEITQAVKLIAQDVLDAKVNPGDITEELIGEYLFTGHLPKTLRDPDLI 196
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRT GE RLS+FL WQ AYSE F WPDF E A+ ++N R+RRFGG+
Sbjct: 197 IRTSGELRLSNFLPWQAAYSELYFTDVLWPDFDEEALKEAIAEFNRRNRRFGGV 250
>gi|254469652|ref|ZP_05083057.1| undecaprenyl pyrophosphate synthetase 1 [Pseudovibrio sp. JE062]
gi|211961487|gb|EEA96682.1| undecaprenyl pyrophosphate synthetase 1 [Pseudovibrio sp. JE062]
Length = 257
Score = 292 bits (747), Expect = 3e-77, Method: Composition-based stats.
Identities = 116/232 (50%), Positives = 157/232 (67%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P H+ IIMDGNGRWA RGLPR GHR+G++ E V A + GI LT+F+FS NW
Sbjct: 20 SVPRHVAIIMDGNGRWAQRRGLPRTEGHRRGVKTLREAVKHAQKRGISYLTLFSFSSENW 79
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+S L+ L++ F+ L K N+KVRVIG++ +LD +L +L +AE +T T
Sbjct: 80 SRPQQEVSFLMALLRRFVYDDLKDLVKANVKVRVIGSKENLDKSMLTLLNDAEQKTAHCT 139
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL L IAFNY +RDE RA + + + +E+G + + D+ ++ LDT ++PDPDLI+RT
Sbjct: 140 GLVLVIAFNYGARDEYVRAARKLAERVEAGELKAADIGEDDVSACLDTHEMPDPDLIVRT 199
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
GGE+RLS+FLLWQ AY+EF F P WP+F F AL ++ RDRR+GGLS
Sbjct: 200 GGEQRLSNFLLWQAAYAEFYFAPTPWPEFDSGAFDDALLAFSNRDRRYGGLS 251
>gi|153815803|ref|ZP_01968471.1| hypothetical protein RUMTOR_02048 [Ruminococcus torques ATCC 27756]
gi|317502107|ref|ZP_07960288.1| Di-trans,poly-cis-decaprenylcistransferase [Lachnospiraceae
bacterium 8_1_57FAA]
gi|331090379|ref|ZP_08339260.1| di-trans,poly-cis-decaprenylcistransferase [Lachnospiraceae
bacterium 3_1_46FAA]
gi|145846828|gb|EDK23746.1| hypothetical protein RUMTOR_02048 [Ruminococcus torques ATCC 27756]
gi|316896496|gb|EFV18586.1| Di-trans,poly-cis-decaprenylcistransferase [Lachnospiraceae
bacterium 8_1_57FAA]
gi|330401126|gb|EGG80719.1| di-trans,poly-cis-decaprenylcistransferase [Lachnospiraceae
bacterium 3_1_46FAA]
Length = 235
Score = 292 bits (747), Expect = 3e-77, Method: Composition-based stats.
Identities = 110/233 (47%), Positives = 159/233 (68%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P HI II+DGNGRWA A+G+PR GH +G + +I A +GIK LT++AFS NW
Sbjct: 2 NVPQHIAIILDGNGRWAKAKGMPRNYGHAQGSKNVEKICEEAWRMGIKYLTVYAFSTENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP +E++ L+KL+++++K + KN++K+RVIG+ LDDDI ++E E T N
Sbjct: 62 SRPENEVAALMKLLRNYMKTCLKTAAKNDMKIRVIGDIEPLDDDIKSRIRELEAATTDNG 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GLN IA NY SRDE++RA + + +D G + + ++D S+ YLDT +PDPD++IRT
Sbjct: 122 GLNFTIALNYGSRDELTRAAQKMAKDCAEGKIKAEEIDESVFETYLDTHGIPDPDMMIRT 181
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
GE+RLS++LLWQ+AYSEF F WPDF++E A+ +YN R RRFG + +
Sbjct: 182 SGEQRLSNYLLWQLAYSEFYFTDVPWPDFTKEELVKAIEEYNHRHRRFGKVEE 234
>gi|55820295|ref|YP_138737.1| undecaprenyl pyrophosphate synthase [Streptococcus thermophilus LMG
18311]
gi|55822185|ref|YP_140626.1| undecaprenyl pyrophosphate synthase [Streptococcus thermophilus
CNRZ1066]
gi|116627137|ref|YP_819756.1| undecaprenyl pyrophosphate synthetase [Streptococcus thermophilus
LMD-9]
gi|73920281|sp|Q5M1N6|UPPS_STRT1 RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|73920282|sp|Q5M677|UPPS_STRT2 RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|55736280|gb|AAV59922.1| undecaprenyl pyrophosphate synthetase [Streptococcus thermophilus
LMG 18311]
gi|55738170|gb|AAV61811.1| undecaprenyl pyrophosphate synthetase [Streptococcus thermophilus
CNRZ1066]
gi|116100414|gb|ABJ65560.1| Undecaprenyl pyrophosphate synthetase [Streptococcus thermophilus
LMD-9]
gi|312277613|gb|ADQ62270.1| hypothetical protein STND_0198 [Streptococcus thermophilus ND03]
Length = 249
Score = 292 bits (747), Expect = 3e-77, Method: Composition-based stats.
Identities = 106/235 (45%), Positives = 148/235 (62%), Gaps = 4/235 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P+HIGIIMDGNGRWA R PR GH+ G++ ++ A+++G+K LT++AFS NW
Sbjct: 15 NIPNHIGIIMDGNGRWAKKRLQPRVMGHKAGMDALQKVTIEASQLGVKVLTVYAFSTENW 74
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+ ++ L F K L KNN+++ IG+ L + L L++A +QT+ N+
Sbjct: 75 SRPQDEVKFIMNLPVEFFNKYVPELDKNNVRILTIGDNSRLPKETLDALEKAVEQTKHNS 134
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDL 184
GL L A NY R EI A++ I +++E G + +D LIAK+L T +P DPDL
Sbjct: 135 GLILNFALNYGGRAEIVSAVQAIAKEVEIGRLRPEAIDEDLIAKHLMTDKLPYLYRDPDL 194
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IIRT GE RLS+FL WQ AYSEF F +WPDF ++ A++ YN R RRFGG+
Sbjct: 195 IIRTSGELRLSNFLPWQSAYSEFYFTDVFWPDFDQQGLHQAISDYNKRHRRFGGV 249
>gi|226940989|ref|YP_002796063.1| UppS [Laribacter hongkongensis HLHK9]
gi|226715916|gb|ACO75054.1| UppS [Laribacter hongkongensis HLHK9]
Length = 252
Score = 292 bits (747), Expect = 3e-77, Method: Composition-based stats.
Identities = 99/235 (42%), Positives = 142/235 (60%), Gaps = 2/235 (0%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
P HI IIMDGNGRWA R LPR AGH++G+E E V E+G++ LT+FAFS N
Sbjct: 12 GDVPRHIAIIMDGNGRWAKKRFLPRVAGHKRGLETVRETVRTCTELGVEYLTLFAFSSEN 71
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+S L+ L L++ L NI+++++G+ ++ ++ A+ +T N
Sbjct: 72 WRRPDEEVSFLMGLFMQALEREVDRLHGRNIRLKIVGHLARFSGELQDRIEAAQLKTAGN 131
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
TGL L I +Y R +I +AI+ G+ V + +A YL + P+PDL IR
Sbjct: 132 TGLTLTICADYGGRWDILQAIEQ--WRQAGGAASPEPVTEADLAPYLSLAYAPEPDLFIR 189
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE+R+S+FLLWQ+AY+E F WPDF R F A++ Y+ R+RRFG S++
Sbjct: 190 TGGEQRVSNFLLWQLAYTELYFTDALWPDFDRTAFMTAIDSYHRRERRFGRTSEQ 244
>gi|171910871|ref|ZP_02926341.1| undecaprenyl-pyrophosphate synthetase [Verrucomicrobium spinosum
DSM 4136]
Length = 237
Score = 292 bits (747), Expect = 3e-77, Method: Composition-based stats.
Identities = 102/231 (44%), Positives = 144/231 (62%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IIMDGNGRWA RGLPR GHR+G E V + ++GI+ LT++AFS NW+
Sbjct: 7 IPRHVAIIMDGNGRWAKERGLPRTEGHRRGAESVQAAVESCGDLGIEFLTLYAFSTENWK 66
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP SE+ L+K+++ FLK+ + K N++++ IG L L ++ + T NTG
Sbjct: 67 RPKSEVDSLMKMLERFLKQKTPDMVKKNVRLQAIGRLHDLPQSCQDQLHKSIEVTSGNTG 126
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L A +Y SR+EI IK++ +E G + +D+ + +K+L T PDPDL+IRT
Sbjct: 127 LTLIFALSYGSREEIIDGIKSLIDSVEKGHLDKGMIDAEVFSKHLYTRYYPDPDLLIRTS 186
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
GE RLS+FLLWQ++Y+EF WPDF RE A+ + R RRFGG+S
Sbjct: 187 GEMRLSNFLLWQLSYTEFYITQTLWPDFRREQLVEAVRDFGRRQRRFGGVS 237
>gi|261879014|ref|ZP_06005441.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella bergensis
DSM 17361]
gi|270334398|gb|EFA45184.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella bergensis
DSM 17361]
Length = 255
Score = 292 bits (747), Expect = 4e-77, Method: Composition-based stats.
Identities = 94/241 (39%), Positives = 147/241 (60%), Gaps = 2/241 (0%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+A + P HI IIMDGNGRWAA +G R GH+ G++ I + +G+K LT++
Sbjct: 1 MAEPDMTKIPRHIAIIMDGNGRWAAEQGKERSFGHQAGVDTVRCITSECTRLGVKFLTLY 60
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
FS NW RP EIS L+ L+ + L+ KNN++ RV+G L D+ LKE
Sbjct: 61 TFSTENWSRPQDEISALMGLVLTSLEDEI--FMKNNVRFRVVGEMERLPKDVQDKLKETM 118
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
D T N+ + + +A +YSSR EI++A + I +++++G + D++ ++ +++ T+ +PD
Sbjct: 119 DHTAKNSAMTMVVALSYSSRWEITKATREIAEEVKAGKLRPEDINEDIVNEHMATNFMPD 178
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL+IRTGG+ R+S+++LWQ+AYSE F YWP F + A+ Y R RRFG +
Sbjct: 179 PDLLIRTGGDLRISNYMLWQIAYSELYFCDTYWPAFREKDLHRAIVSYQNRQRRFGKTEE 238
Query: 242 K 242
+
Sbjct: 239 Q 239
>gi|113476060|ref|YP_722121.1| undecaprenyl pyrophosphate synthase [Trichodesmium erythraeum
IMS101]
gi|110167108|gb|ABG51648.1| Undecaprenyl pyrophosphate synthetase [Trichodesmium erythraeum
IMS101]
Length = 248
Score = 292 bits (747), Expect = 4e-77, Method: Composition-based stats.
Identities = 95/239 (39%), Positives = 141/239 (58%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P H+ +IMDGNGRWA +RGLPR GHRKG+E +++ + G++ LT
Sbjct: 10 LPVDLEPERLPHHVAVIMDGNGRWAQSRGLPRIMGHRKGVETLKDLLRCCRDWGLEALTA 69
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP+ E++ L+ L + L++ + ++++R +GN SL + +K +
Sbjct: 70 YAFSSENWGRPLEEVNFLMTLFEKVLRQELQEIVAEDVQIRFVGNLSSLPVSLQAEIKHS 129
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ TR N G+ +A NY R EI A K I I+ G + +++ L KYL T+ +
Sbjct: 130 MEMTRPNQGIKFTVATNYGGRQEIVHACKAIGTQIQKGLLKPEEINEGLFEKYLYTAGIS 189
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDL+IRT GE R+S+FLLWQ+AYSE WPDF+R F AL Y R+RRFG +
Sbjct: 190 HPDLLIRTSGEMRISNFLLWQMAYSEIYVTQTLWPDFNRYEFHRALCAYQKRERRFGKI 248
>gi|23099045|ref|NP_692511.1| undecaprenyl pyrophosphate synthetase [Oceanobacillus iheyensis
HTE831]
gi|42559817|sp|Q8EQU9|UPPS_OCEIH RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|22777273|dbj|BAC13546.1| undecaprenyl pyrophosphate synthetase [Oceanobacillus iheyensis
HTE831]
Length = 252
Score = 292 bits (747), Expect = 4e-77, Method: Composition-based stats.
Identities = 105/231 (45%), Positives = 146/231 (63%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P HI IIMDGNGRWA RGLPR AGHR+G+ N IV A +K LT++ FS NW
Sbjct: 22 NIPSHIAIIMDGNGRWAQKRGLPRIAGHREGVSTVNRIVKTAVNANVKVLTLYTFSTENW 81
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP SE+ ++KL K FL L +NN++V+ IG+ ++ ++ A ++T+ N
Sbjct: 82 KRPKSEVDFILKLPKEFLHVYLPGLIENNVRVQTIGDFNAVPKHTQDAIEYAMEKTKDND 141
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL L A NY SR EI A+K I Q ++ + +D S K+L T+ + DPDL+IRT
Sbjct: 142 GLVLNFALNYGSRYEIIHAVKQIVQKTKASELDVEQLDESYFEKHLFTNGLSDPDLLIRT 201
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GGE RLS+F+LWQ+AY+EF F + WP+F + F AL +Y R RR+GG+
Sbjct: 202 GGEYRLSNFMLWQLAYTEFWFTEKLWPEFDEDTFHQALMEYQQRKRRYGGI 252
>gi|253752616|ref|YP_003025757.1| undecaprenyl pyrophosphate synthetase [Streptococcus suis SC84]
gi|253754442|ref|YP_003027583.1| undecaprenyl pyrophosphate synthetase [Streptococcus suis P1/7]
gi|253756375|ref|YP_003029515.1| undecaprenyl pyrophosphate synthetase [Streptococcus suis BM407]
gi|251816905|emb|CAZ52554.1| undecaprenyl pyrophosphate synthetase [Streptococcus suis SC84]
gi|251818839|emb|CAZ56682.1| undecaprenyl pyrophosphate synthetase [Streptococcus suis BM407]
gi|251820688|emb|CAR47450.1| undecaprenyl pyrophosphate synthetase [Streptococcus suis P1/7]
gi|319759031|gb|ADV70973.1| undecaprenyl pyrophosphate synthase [Streptococcus suis JS14]
Length = 251
Score = 292 bits (747), Expect = 4e-77, Method: Composition-based stats.
Identities = 106/234 (45%), Positives = 140/234 (59%), Gaps = 4/234 (1%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI +IMDGNGRWA R PR GH+ G++ ++ A+++G+K LT++AFS NW
Sbjct: 18 VPKHIAVIMDGNGRWAKKRMQPRIMGHKAGMDALQKVTKTASDLGVKVLTVYAFSTENWS 77
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ ++ L F K L NN+K+++IG+ L L L +AE +T+ NTG
Sbjct: 78 RPEKEVKFIMNLPVEFYDKYVPELHANNVKIQMIGDHSKLPVPTLNALYKAEQKTKGNTG 137
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLI 185
L L A NY RDE++RA+K I QD+ D+D LIA YL T + DPDL+
Sbjct: 138 LILNFALNYGGRDEVTRAVKAIAQDVLDAKFNPGDIDEKLIADYLYTGTLSPTLRDPDLV 197
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRT GE RLS+FL WQ AYSE F WPDF E A+ +YN R RRFGG+
Sbjct: 198 IRTSGELRLSNFLPWQTAYSELYFTDIAWPDFDGEALKLAIKEYNRRHRRFGGV 251
>gi|149006015|ref|ZP_01829744.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
SP18-BS74]
gi|303255044|ref|ZP_07341120.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae BS455]
gi|303259370|ref|ZP_07345347.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
SP-BS293]
gi|303261125|ref|ZP_07347074.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
SP14-BS292]
gi|303263453|ref|ZP_07349376.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae BS397]
gi|303265745|ref|ZP_07351643.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae BS457]
gi|303267824|ref|ZP_07353626.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae BS458]
gi|147762371|gb|EDK69332.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
SP18-BS74]
gi|302597874|gb|EFL64944.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae BS455]
gi|302637962|gb|EFL68448.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
SP14-BS292]
gi|302639304|gb|EFL69762.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
SP-BS293]
gi|302642520|gb|EFL72865.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae BS458]
gi|302644653|gb|EFL74902.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae BS457]
gi|302647226|gb|EFL77450.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae BS397]
gi|332076708|gb|EGI87170.1| di-trans poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae GA17545]
Length = 252
Score = 292 bits (747), Expect = 4e-77, Method: Composition-based stats.
Identities = 105/238 (44%), Positives = 136/238 (57%), Gaps = 4/238 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ + P HIGIIMDGNGRWA R PR GH+ G+E + AA ++G+K +T++AFS
Sbjct: 15 VPTQVPAHIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQTVTKAANKLGVKVITVYAFST 74
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+ ++ L F L NN+K+++IG L L +AE+ T+
Sbjct: 75 ENWTRPDQEVKFIMNLPVEFYDNYVPELHANNVKIQMIGETDRLPKQTFEALTKAEELTK 134
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----D 181
NTGL L A NY R EI++A+K I QD+ + D+ LI YL T +P D
Sbjct: 135 NNTGLILNFALNYGGRAEITQALKLISQDVLDAKINPGDITEELIGNYLFTQHLPKDLRD 194
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDLIIRT GE RLS+FL WQ AYSE F WPDF A+ YN R RRFGG+
Sbjct: 195 PDLIIRTSGELRLSNFLPWQGAYSELYFTDTLWPDFDEVALQEAILAYNRRHRRFGGV 252
>gi|258621000|ref|ZP_05716034.1| Undecaprenyl diphosphate synthase [Vibrio mimicus VM573]
gi|262170775|ref|ZP_06038453.1| undecaprenyl pyrophosphate synthetase [Vibrio mimicus MB-451]
gi|258586388|gb|EEW11103.1| Undecaprenyl diphosphate synthase [Vibrio mimicus VM573]
gi|261891851|gb|EEY37837.1| undecaprenyl pyrophosphate synthetase [Vibrio mimicus MB-451]
Length = 250
Score = 292 bits (747), Expect = 4e-77, Method: Composition-based stats.
Identities = 91/239 (38%), Positives = 148/239 (61%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S+ P HI +IMDGNGRWA A+G PR GH+ G+ + ++ +A +GIK +T+FAF
Sbjct: 5 SISQDVLPKHIAVIMDGNGRWAKAQGKPRVFGHKNGVAAVRKTISTSARLGIKAVTLFAF 64
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRRP E+ L++L + L L KNN+++RVIG++ + + + +AE
Sbjct: 65 SSENWRRPEEEVGVLMELFITVLSTEIKKLHKNNLRLRVIGDKSRFSERLQSKIAQAEAL 124
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NTG+ + IA NY + +I +A + + + + G + ++D ++I ++L +D+P+ D
Sbjct: 125 TASNTGMVVNIAANYGGKWDILQATQALAEKVAQGDLLPAEIDEAMIKQHLTMADLPEVD 184
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRT GE R+S+F+LWQ+AY+E F P +WP+F A+ + R+RRFG ++
Sbjct: 185 LLIRTSGECRISNFMLWQLAYAEMYFTPVFWPEFDENCLIEAVTWFVNRERRFGCTGEQ 243
>gi|255659933|ref|ZP_05405342.1| di-trans,poly-cis-decaprenylcistransferase [Mitsuokella multacida
DSM 20544]
gi|260847804|gb|EEX67811.1| di-trans,poly-cis-decaprenylcistransferase [Mitsuokella multacida
DSM 20544]
Length = 267
Score = 292 bits (747), Expect = 4e-77, Method: Composition-based stats.
Identities = 94/242 (38%), Positives = 146/242 (60%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P H+ +IMDGNGRWA +GL R AGH+ G++ +++ A ++ I+ LT+
Sbjct: 26 LYDRINWQRLPRHVAVIMDGNGRWAQGKGLIRTAGHKAGVKTLKDVLKTAIDLRIEALTV 85
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E+ L+KL +L K + N+++R IG + + + ++EA
Sbjct: 86 YAFSTENWKRPRPEVEFLMKLFSEYLLKELEEMNDYNVRIRFIGRMEGMPEGLQRQMREA 145
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E + NTG+ +A NY +DE+ RA +++ + G + D+D+ I + LDT+ P
Sbjct: 146 EALMKDNTGIRFNVAANYGGQDELIRAAQSLARQAAEGKIAPEDIDAEAIEQELDTAGDP 205
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRT G++RLS+FLLWQ AY+EF F WPDF+ F A+ + RDRRFGGL+
Sbjct: 206 PVDLVIRTSGDQRLSNFLLWQSAYAEFYFTDVNWPDFTPACFVDAMVDFAGRDRRFGGLT 265
Query: 241 KK 242
K
Sbjct: 266 NK 267
>gi|255009914|ref|ZP_05282040.1| putative undecaprenyl pyrophosphate synthetase [Bacteroides
fragilis 3_1_12]
gi|313147702|ref|ZP_07809895.1| undecaprenyl pyrophosphate synthetase [Bacteroides fragilis 3_1_12]
gi|313136469|gb|EFR53829.1| undecaprenyl pyrophosphate synthetase [Bacteroides fragilis 3_1_12]
Length = 244
Score = 292 bits (747), Expect = 4e-77, Method: Composition-based stats.
Identities = 98/240 (40%), Positives = 144/240 (60%), Gaps = 2/240 (0%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ + P H+ IIMDGNGRWA RG R GH+ G E + I AA +G+K LT++
Sbjct: 5 EQIDLNRIPKHVAIIMDGNGRWAKQRGRERSFGHQAGAETVHIITEEAARLGVKFLTLYT 64
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RP E++ L+ L+ +++ + KNNI R+IG+ L +++ L +
Sbjct: 65 FSTENWNRPSDEVAALMSLLFDSIEEE--TFMKNNISFRIIGDINKLPENVRKRLNACVE 122
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
+T NTG+ L +A +YS+R EI+ A + I ++ G + ++ S I +L T+ +PDP
Sbjct: 123 RTSKNTGMCLVLALSYSARWEITEAARQIATLVQKGEMTPEEITSESIQTHLTTNFMPDP 182
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL+IRTGGE RLS++LLWQ AYSE F +WPDF E A+ Y R+RRFG S++
Sbjct: 183 DLLIRTGGEIRLSNYLLWQCAYSELYFCETFWPDFKEEELHKAICDYQRRERRFGKTSEQ 242
>gi|306828822|ref|ZP_07462014.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus mitis
ATCC 6249]
gi|304429000|gb|EFM32088.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus mitis
ATCC 6249]
Length = 252
Score = 292 bits (747), Expect = 4e-77, Method: Composition-based stats.
Identities = 103/238 (43%), Positives = 139/238 (58%), Gaps = 4/238 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ + P HIGIIMDGNGRWA R PR GH+ G+E ++ AA ++G+K +T++AFS
Sbjct: 15 VPTQVPAHIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQKVTKAANKMGVKVITVYAFST 74
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+ ++ L F L NN+K+++IG L LK+AE+ T+
Sbjct: 75 ENWTRPDQEVKFIMNLPVEFYDNYVPELHANNVKIQMIGETDRLPKPTFEALKKAEELTK 134
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----D 181
NTGL L A NY R EI++A+K + QD+ + D+ +I YL T +P D
Sbjct: 135 NNTGLILNFALNYGGRAEITQALKGLAQDVLDAKINPGDITEDMIGDYLFTQHLPKDLRD 194
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDLIIRT GE RLS+FL WQ AYSE F WPDF A+ +N R+RRFGG+
Sbjct: 195 PDLIIRTSGELRLSNFLPWQAAYSELYFTDTLWPDFDEAALQEAIAAFNHRNRRFGGV 252
>gi|238019364|ref|ZP_04599790.1| hypothetical protein VEIDISOL_01228 [Veillonella dispar ATCC 17748]
gi|237864063|gb|EEP65353.1| hypothetical protein VEIDISOL_01228 [Veillonella dispar ATCC 17748]
Length = 254
Score = 292 bits (747), Expect = 4e-77, Method: Composition-based stats.
Identities = 102/238 (42%), Positives = 153/238 (64%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ S+ P H+ IIMDGNGRWA RG+PR GHR G +V +IV AA E+GI+ LT++ FS
Sbjct: 16 IDSNVIPKHVAIIMDGNGRWAKRRGMPRSMGHRAGADVLKQIVIAADEIGIRALTVYGFS 75
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+S L+ LIK +L + ++N+++R IG +L D++ ++ +AE T
Sbjct: 76 TENWKRPEQEVSLLMALIKEYLNNNVKYMHEHNVRIRFIGYIGALSDELQKIIHDAELLT 135
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NTGL L +A NY RDEI R I++I + G++ + ++ ++ L T + D DL
Sbjct: 136 QNNTGLTLQLAINYGGRDEIVRTIRDITNSVVDGTITTDEITEDYVSSQLFTKEFSDVDL 195
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IR + R+S+FLLWQ+AY+EF F +WPDF++E A+ Y R+RRFGGL +
Sbjct: 196 LIRPSSDFRISNFLLWQLAYAEFWFTDLHWPDFTKETLLEAVAAYQKRERRFGGLRDE 253
>gi|169350432|ref|ZP_02867370.1| hypothetical protein CLOSPI_01200 [Clostridium spiroforme DSM 1552]
gi|169292752|gb|EDS74885.1| hypothetical protein CLOSPI_01200 [Clostridium spiroforme DSM 1552]
Length = 251
Score = 292 bits (747), Expect = 4e-77, Method: Composition-based stats.
Identities = 98/232 (42%), Positives = 142/232 (61%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P HI IMDGNGRWA R +PR GH +G + +I E+ ++ +T++AFS N+
Sbjct: 20 NIPKHIAFIMDGNGRWAKKRKMPRTYGHHEGTKTIRDIALKCNELKVEAMTVYAFSTENF 79
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP SE+ + KL K F L +NN+K+ IG+ + ++ +A +QT+ NT
Sbjct: 80 ARPDSEVQYIFKLPKDFFNSYMKELMENNVKICTIGHLEMAPKETQDIINKAIEQTKNNT 139
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL L AF Y RDEI A K + + ++ G + + +++ L L TSD+PD DL++RT
Sbjct: 140 GLKLCFAFIYGGRDEIVWASKKLAKRVKDGQIDADEINEKLFESELMTSDLPDVDLMVRT 199
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
GE+RLS+FLLWQ+AY+EFVF +WPDF+ + + QY RDRRFGGL
Sbjct: 200 SGEQRLSNFLLWQLAYAEFVFTDVFWPDFNDDELLKVIWQYQNRDRRFGGLK 251
>gi|237725971|ref|ZP_04556452.1| undecaprenyl pyrophosphate synthetase [Bacteroides sp. D4]
gi|265753004|ref|ZP_06088573.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides sp.
3_1_33FAA]
gi|229435779|gb|EEO45856.1| undecaprenyl pyrophosphate synthetase [Bacteroides dorei 5_1_36/D4]
gi|263236190|gb|EEZ21685.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides sp.
3_1_33FAA]
Length = 243
Score = 292 bits (747), Expect = 4e-77, Method: Composition-based stats.
Identities = 104/240 (43%), Positives = 151/240 (62%), Gaps = 2/240 (0%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ S P H+ IIMDGNGRWA RG R GH+ G E + I AA +G+K LT++
Sbjct: 5 EQIDKSRIPAHVAIIMDGNGRWAKQRGQARSFGHQAGAETVHIIAEEAARLGVKYLTLYT 64
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RPV E++ L+ L+ +++ + KNNI R+IG+ L ++L L + +
Sbjct: 65 FSTENWNRPVDEVAALMSLLMDSIEEE--TFMKNNISFRIIGDTAKLPVEVLERLNQCIE 122
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T +NTG+ L +A +YSS+ EI+ A++ I I++ + D+D +LI+ +L T+ +PDP
Sbjct: 123 HTSINTGMCLTLALSYSSKWEITEAVRQITIKIQNNKLAIDDIDDNLISAHLSTNYMPDP 182
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL+IRTGGE RLS++LLWQ AYSE F +WPDF E F A+ Y R+RRFG S++
Sbjct: 183 DLLIRTGGEIRLSNYLLWQCAYSELYFCETFWPDFREEEFCKAIYDYQKRERRFGKTSEQ 242
>gi|157150748|ref|YP_001451120.1| undecaprenyl pyrophosphate synthase [Streptococcus gordonii str.
Challis substr. CH1]
gi|262283496|ref|ZP_06061262.1| undecaprenyl diphosphate synthase [Streptococcus sp. 2_1_36FAA]
gi|157075542|gb|ABV10225.1| undecaprenyl diphosphate synthase [Streptococcus gordonii str.
Challis substr. CH1]
gi|262260987|gb|EEY79687.1| undecaprenyl diphosphate synthase [Streptococcus sp. 2_1_36FAA]
Length = 249
Score = 292 bits (747), Expect = 4e-77, Method: Composition-based stats.
Identities = 106/234 (45%), Positives = 143/234 (61%), Gaps = 4/234 (1%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HIGIIMDGNGRWA R PR GH+ G+E + AA E+G++ LT++AFS NW
Sbjct: 16 VPKHIGIIMDGNGRWAKKRLQPRVFGHKAGMEALQNVTIAAKEMGVQVLTVYAFSTENWS 75
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ ++ L F ++ L KNN+K+++IG+ L L +AE+ T+LNTG
Sbjct: 76 RPEKEVKFIMNLPVEFYERYVPELHKNNVKIQMIGDVARLPKATYDALVKAEELTKLNTG 135
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLI 185
L L A NY R E+++AI+NI Q++ D+ +I YL TS +P DPDLI
Sbjct: 136 LILNFALNYGGRAELTQAIRNIAQEVLDAKFNPGDISEEMIGDYLQTSTLPRILRDPDLI 195
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRT GE RLS+FL WQ AYSE F WPDF+ + A+ +Y+ R RRFGG+
Sbjct: 196 IRTSGELRLSNFLPWQSAYSELYFTKTLWPDFNEKSLKEAIEEYSKRQRRFGGV 249
>gi|78188442|ref|YP_378780.1| di-trans-poly-cis-decaprenylcistransferase [Chlorobium
chlorochromatii CaD3]
gi|78170641|gb|ABB27737.1| Undecaprenyl pyrophosphate synthetase [Chlorobium chlorochromatii
CaD3]
Length = 285
Score = 292 bits (747), Expect = 4e-77, Method: Composition-based stats.
Identities = 100/237 (42%), Positives = 149/237 (62%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ P HI IIMDGNGRWA +G R GH G+ +IV A ++GI LT+F FS
Sbjct: 35 KAGQLPQHIAIIMDGNGRWAKMKGKSRMEGHIAGVSSVRDIVEACHQLGIGYLTLFTFST 94
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP EIS L++L+ + + L +NNI+++VIG L + VL++ + T+
Sbjct: 95 ENWKRPEQEISALMQLLIRVIGRESRKLHENNIRLQVIGEMHRLPQKVERVLRDCMELTK 154
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N GL L +A +YS + ++ +A + I D+++G++ +D + +A YL T+++PDP+L+
Sbjct: 155 ENNGLMLNLALSYSGQWDMLQACRAIAADVQAGTLQLEAIDEACMASYLSTAEMPDPELL 214
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRT GE RLS+FLLWQ AYSE + YWPDF RE + AL + R+RRFG S++
Sbjct: 215 IRTSGEFRLSNFLLWQSAYSEIYYTSIYWPDFRREQLYEALYDFQQRERRFGQTSEQ 271
>gi|310659004|ref|YP_003936725.1| undecaprenyl pyrophosphate synthase [Clostridium sticklandii DSM
519]
gi|308825782|emb|CBH21820.1| undecaprenyl pyrophosphate synthase [Clostridium sticklandii]
Length = 242
Score = 291 bits (746), Expect = 4e-77, Method: Composition-based stats.
Identities = 109/237 (45%), Positives = 148/237 (62%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ S+ P HIGIIMDGNGRWA R LPR GH+ G+E +IV A E+ ++ LT++AF
Sbjct: 6 KIDKSNIPSHIGIIMDGNGRWAKKRMLPRSFGHKAGVETIRDIVKACNELKVEYLTLYAF 65
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP E+S L+KL+ +LKK L KNN+++ IG+ L I L E+ ++
Sbjct: 66 STENWNRPEEEVSALMKLLLEYLKKETKELDKNNVRINAIGDYSKLPKLIYDELCESIEK 125
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NTG+ + +A NY SR++I A+KNI + + VD + YL T +PDPD
Sbjct: 126 TKNNTGVVMSLALNYGSRNDIMTAVKNIILEEREKGIDIDSVDEDFMRNYLSTRLLPDPD 185
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LIIR GE RLS+FL+W+ AY+EF F WPDF RE + A+ Y RDRRFG +S
Sbjct: 186 LIIRPSGELRLSNFLMWEAAYAEFWFSDINWPDFKREDLYKAIFDYQNRDRRFGTIS 242
>gi|288958463|ref|YP_003448804.1| undecaprenyl pyrophosphate synthetase [Azospirillum sp. B510]
gi|288910771|dbj|BAI72260.1| undecaprenyl pyrophosphate synthetase [Azospirillum sp. B510]
Length = 246
Score = 291 bits (746), Expect = 4e-77, Method: Composition-based stats.
Identities = 107/236 (45%), Positives = 156/236 (66%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
S++ P H+ IIMDGNGRWA ARGLPR AGH+KG++ V AA E+GI LTIF+FS
Sbjct: 8 RSNTAPAHVAIIMDGNGRWAKARGLPRTAGHKKGVDAVRRTVEAARELGIGTLTIFSFSS 67
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NWRRP E+S+L+ L++ +L+ L + I++RVIG+R L DI ++ AE TR
Sbjct: 68 ENWRRPEEEVSDLMGLLRFYLRSEVAELHRAGIRLRVIGDRARLSADINRLIDNAEALTR 127
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N + L +A +Y +R EI A + + +++ +G + +D ++ L T+D+PDPDLI
Sbjct: 128 DNRVMTLVVALSYGARLEIVHAARRLAEEVAAGRLSPGAIDEEALSARLYTADIPDPDLI 187
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
IRT GEKR+S+FLLWQ AY+E VF+ WPDF++ A+ +++ R+RRFG +
Sbjct: 188 IRTSGEKRISNFLLWQAAYAELVFVDTLWPDFTKRDLEAAIEEFHRRERRFGATTA 243
>gi|229824073|ref|ZP_04450142.1| hypothetical protein GCWU000282_01377 [Catonella morbi ATCC 51271]
gi|229786427|gb|EEP22541.1| hypothetical protein GCWU000282_01377 [Catonella morbi ATCC 51271]
Length = 243
Score = 291 bits (746), Expect = 4e-77, Method: Composition-based stats.
Identities = 107/235 (45%), Positives = 145/235 (61%), Gaps = 3/235 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P H+ +IMDGNGRWA R LPR AGH+KG++ +I A ++G+K LT++AFS N
Sbjct: 5 SKVPAHVALIMDGNGRWAKKRFLPRVAGHKKGVDTIKKITKRANQLGVKMLTVYAFSTEN 64
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W+RP E+S L+KL K F K L + N++V IG+ L + VLK+A T
Sbjct: 65 WKRPEQEVSFLMKLPKEFFAKFVPELLEQNVRVETIGDLEGLPEATRKVLKQAIADTAHC 124
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS---DVPDPDL 184
TGL L A NY S+DE+ A++ + + + SG++ D+ LI + L+T+ + +PDL
Sbjct: 125 TGLILNFAINYGSQDELCHAVQTLARQVASGTLKPEDITPDLIGQNLETAKFGSLANPDL 184
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IIRT GE+RLS+FLLWQ AYSEF F WPDF F AL Y R RRFG +
Sbjct: 185 IIRTSGEERLSNFLLWQAAYSEFYFTERLWPDFDEGDFDQALAVYASRQRRFGKV 239
>gi|295094738|emb|CBK83829.1| undecaprenyl diphosphate synthase [Coprococcus sp. ART55/1]
Length = 248
Score = 291 bits (746), Expect = 4e-77, Method: Composition-based stats.
Identities = 107/229 (46%), Positives = 147/229 (64%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P+H+ +IMDGNGRWA R LPR GH +G + I ++GIK LT++AFS NW
Sbjct: 17 NVPEHVAVIMDGNGRWAKKRFLPRNYGHAEGAKALEAICENCDKLGIKYLTVYAFSTENW 76
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+R V E++ ++ L + +L +N+KV +IG R L +DI+ + + E +T NT
Sbjct: 77 KRSVEEVTGIMNLFRKYLVDSIERSNNSNMKVNLIGKREGLPEDIVQKMDDLERETAGNT 136
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL IA NY RDEI RA+K I +D ++G + + D+D SL A+YLDT VPDPDL+IRT
Sbjct: 137 GLQFHIAINYGGRDEIVRAVKKIMKDADAGKISADDIDESLFAEYLDTKGVPDPDLLIRT 196
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
GE+R S+FL WQ+AYSEF F WPDF + A+ YN R+RRFG
Sbjct: 197 SGEERTSNFLPWQLAYSEFYFTDTLWPDFDMDSLIEAVRYYNKRERRFG 245
>gi|239994191|ref|ZP_04714715.1| undecaprenyl diphosphate synthase [Alteromonas macleodii ATCC
27126]
Length = 260
Score = 291 bits (746), Expect = 4e-77, Method: Composition-based stats.
Identities = 94/232 (40%), Positives = 145/232 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R GH+ G+E +V A + GI++LT+FAFS NW+R
Sbjct: 23 PKHVAIIMDGNGRWAQKKGKIRTFGHKAGVESVRSVVRFARQNGIESLTLFAFSSENWKR 82
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L L L KN ++++VIG+ + D ++ +++AED T+ N L
Sbjct: 83 PEEEVSVLMELFNLVLNSEAKRLHKNGVRLQVIGDVEAFDAKLVEKIRKAEDMTKDNKDL 142
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I A K + ++SG + + + ++ T+++P+ DL+IRTGG
Sbjct: 143 VLNIAANYGGRWDIVNAAKQLATQVKSGELDVESICEDALNAHISTANLPELDLLIRTGG 202
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLLWQ AY+E F WPDF+ ++F A++ +N+R RRFG ++
Sbjct: 203 EHRISNFLLWQCAYAELYFTDVLWPDFNEDVFQLAVDDFNVRQRRFGLTGEQ 254
>gi|325479301|gb|EGC82397.1| di-trans,poly-cis-decaprenylcistransferase [Anaerococcus prevotii
ACS-065-V-Col13]
Length = 231
Score = 291 bits (746), Expect = 4e-77, Method: Composition-based stats.
Identities = 97/235 (41%), Positives = 143/235 (60%), Gaps = 4/235 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M +++ P H+ II+DGNGRWA R +PR GH+ G + +I A E G+K L+++AFS
Sbjct: 1 MENTNIPKHVAIILDGNGRWAKKRLMPRTFGHKNGADNVVDICLYAKERGVKYLSLYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+ L+KL+ F+ + L K N K+ +G+ L +D + + ++T
Sbjct: 61 TENWKRPDEEVGYLMKLVIKFINEKIDILMKENCKLLFLGDLSKLPEDTKDICLKGMEKT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N G+ L IA NY RDEI A +++ D + ++ LI+ YL T PDPDL
Sbjct: 121 SKNDGITLNIALNYGGRDEIVNAFRHMLDDGVEKT----EISEELISDYLYTKGQPDPDL 176
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IR GGE RLS+FL++Q+AYSE F WPDF+R+ F AL ++ R+RR+GGL
Sbjct: 177 LIRPGGELRLSNFLIYQLAYSELYFTDTLWPDFTRDSFDQALEEFARRNRRYGGL 231
>gi|332204268|gb|EGJ18333.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae GA47901]
Length = 252
Score = 291 bits (746), Expect = 4e-77, Method: Composition-based stats.
Identities = 105/238 (44%), Positives = 136/238 (57%), Gaps = 4/238 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ + P HIGIIMDGNGRWA R PR GH+ G+E + AA ++G+K +T++AFS
Sbjct: 15 VPTQVPAHIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQTVTKAANKLGVKVITVYAFST 74
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+ ++ L F L NN+K+++IG L L +AE+ T+
Sbjct: 75 ENWTRPDQEVKFIMNLPVEFYDNYVPELHANNVKIQMIGETDRLPKQTFEALTKAEELTK 134
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----D 181
NTGL L A NY R EI++A+K I QD+ + D+ LI YL T +P D
Sbjct: 135 NNTGLILNFALNYGGRAEITQALKLISQDVLDAKINPGDITEELIGNYLFTQHLPKDLRD 194
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDLIIRT GE RLS+FL WQ AYSE F WPDF A+ YN R RRFGG+
Sbjct: 195 PDLIIRTSGELRLSNFLPWQGAYSELYFTDTLWPDFDEAALQEAILAYNRRHRRFGGV 252
>gi|77164330|ref|YP_342855.1| di-trans-poly-cis-decaprenylcistransferase [Nitrosococcus oceani
ATCC 19707]
gi|254434491|ref|ZP_05047999.1| undecaprenyl diphosphate synthase [Nitrosococcus oceani AFC27]
gi|76882644|gb|ABA57325.1| Undecaprenyl pyrophosphate synthetase [Nitrosococcus oceani ATCC
19707]
gi|207090824|gb|EDZ68095.1| undecaprenyl diphosphate synthase [Nitrosococcus oceani AFC27]
Length = 252
Score = 291 bits (746), Expect = 4e-77, Method: Composition-based stats.
Identities = 96/237 (40%), Positives = 146/237 (61%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
SS P H+ IIMDGNGRWA R PR GHR G+E ++ A A+ G++ LT+FAFS
Sbjct: 9 QSSKIPSHVAIIMDGNGRWAKQRNRPRFYGHRAGVEAVEGVLRACADTGVRVLTLFAFSS 68
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NWRRP E+ L++L+ S + +++ N+ +R+IG+R + + + +AE T
Sbjct: 69 ENWRRPSQEVQLLMELLASAVSNRLQQIQEQNVCLRIIGDRSKFPEALQTEMAKAEALTA 128
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N G+ L +A NY R +I++A+K + +E G + + + A +L + +P+PDL
Sbjct: 129 QNDGITLVVAANYGGRWDITQAVKQVAAKVEEGRIAVDSITPEVFAAHLSLAGLPEPDLF 188
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTGGE+R+S+FLLWQ+AY+EF F WPDF+ F A+ + R+RRFG S++
Sbjct: 189 IRTGGEQRVSNFLLWQLAYTEFYFTDILWPDFNEAAFARAIKTFVRRERRFGQTSEQ 245
>gi|260592025|ref|ZP_05857483.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella veroralis
F0319]
gi|260536309|gb|EEX18926.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella veroralis
F0319]
Length = 250
Score = 291 bits (746), Expect = 5e-77, Method: Composition-based stats.
Identities = 97/245 (39%), Positives = 148/245 (60%), Gaps = 5/245 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
MV + + P+HI IIMDGNGRWA R PR GH+ G+E I + +G+K LT+
Sbjct: 1 MVEELDMTRIPEHIAIIMDGNGRWATERNKPRSYGHQAGVETVRRITSECVRLGVKYLTL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW RP EI+ L+ L+ + L+ KNN++ RVIG+ L ++ L+E
Sbjct: 61 YTFSTENWSRPSDEIAALMGLVLTSLEDEI--FMKNNVRFRVIGDIGRLPIEVQQKLRET 118
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSV---CSHDVDSSLIAKYLDTS 177
E+ T N+ + + +A +YSSR EI++A+++I + + + L++K++ T+
Sbjct: 119 EEHTEKNSAMTMVVALSYSSRWEITKAVQDIIAENQGNEKVSLRPEMITEELLSKHMQTN 178
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+PDPDL+IRTGGE R+S++LLWQ+AYSE F YWPDF + HA+ + R RRFG
Sbjct: 179 FMPDPDLLIRTGGELRISNYLLWQIAYSELYFCDTYWPDFGEDDLQHAIYSFQKRQRRFG 238
Query: 238 GLSKK 242
++
Sbjct: 239 KTERQ 243
>gi|154506086|ref|ZP_02042824.1| hypothetical protein RUMGNA_03628 [Ruminococcus gnavus ATCC 29149]
gi|153793585|gb|EDN76005.1| hypothetical protein RUMGNA_03628 [Ruminococcus gnavus ATCC 29149]
Length = 238
Score = 291 bits (746), Expect = 5e-77, Method: Composition-based stats.
Identities = 113/234 (48%), Positives = 160/234 (68%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P HI II+DGNGRWA A+G+PR GH +G + I A +GIK LT++AFS NW
Sbjct: 2 NVPQHIAIILDGNGRWAKAKGMPRNYGHAQGSKNVERICEEAWRMGIKYLTVYAFSTENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP SE+S L+KL+++++K + KN++KVRV+G+ +LD+DI + E E+ T+ N
Sbjct: 62 NRPESEVSALMKLLRNYMKTCLKTAAKNDMKVRVLGDIEALDEDIRTRILELEEATKDNG 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GLN IA NY SRDE+ RA++ + +D G V +D ++ YLDT +PDPDL+IRT
Sbjct: 122 GLNFQIALNYGSRDEMIRAVRRLARDCADGKVVPETIDETVFESYLDTHGIPDPDLLIRT 181
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE RLS++LLWQ+AY+EF F WPDF++E A+ QYN RDRR+GG+ ++
Sbjct: 182 SGELRLSNYLLWQLAYTEFYFTEIPWPDFTKEELEKAIAQYNKRDRRYGGVKEE 235
>gi|78187604|ref|YP_375647.1| di-trans-poly-cis-decaprenylcistransferase [Chlorobium luteolum DSM
273]
gi|78167506|gb|ABB24604.1| Undecaprenyl pyrophosphate synthetase [Chlorobium luteolum DSM 273]
Length = 291
Score = 291 bits (746), Expect = 5e-77, Method: Composition-based stats.
Identities = 98/233 (42%), Positives = 144/233 (61%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI IIMDGNGRWA +G R GH G+ ++V A+ ++G+ LT+F FS NW+
Sbjct: 39 LPSHIAIIMDGNGRWARLKGKTRIEGHAAGVSSVRDVVEASIQLGVPYLTLFTFSTENWK 98
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+S L++LI L + +L NN+++ VIGN L D + VL+ + T+ N+
Sbjct: 99 RPEKEVSALMQLIVRILARETRALHDNNVRLNVIGNTALLPDKVRTVLENTIEITKNNSR 158
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L IA +YS + ++++A +I +D+++G + V LI L T+ +PDP+LIIRT
Sbjct: 159 LVLNIALSYSGKWDVTQACASIARDVKAGLLDPPAVTEQLIESRLSTASMPDPELIIRTS 218
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE R+S+F++WQ AYSE F YWPDF R + A+ Y R+RRFG S +
Sbjct: 219 GEFRISNFMIWQSAYSEIYFTNTYWPDFRRAQLYEAIRDYQGRERRFGQTSDQ 271
>gi|224476383|ref|YP_002633989.1| undecaprenyl pyrophosphate synthase [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222420990|emb|CAL27804.1| putative undecaprenyl pyrophosphatase synthetase [Staphylococcus
carnosus subsp. carnosus TM300]
Length = 255
Score = 291 bits (746), Expect = 5e-77, Method: Composition-based stats.
Identities = 98/237 (41%), Positives = 144/237 (60%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ + + P+HI IIMDGNGRWA R +PR GH +G++ +I AA ++G+K LT++A
Sbjct: 18 SDLDLHNIPEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITRAANDIGVKYLTLYA 77
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RP E++ ++ L +FLK L + N+KV IG L + + A++
Sbjct: 78 FSTENWSRPEQEVNYIMNLPVNFLKTFLPELIERNVKVETIGFTDDLPASTMKAINHAKE 137
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
+T N GL L A NY R EI+ +++ +F D+ S D+ I YL TS PDP
Sbjct: 138 KTAQNDGLKLIFAINYGGRAEITDSVRRMFDDMIERGQNSSDITEETINDYLMTSQYPDP 197
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+L+IRT GE+R+S+FL+WQ++YSEF+F + WPDF + + + Y R RRFGGL
Sbjct: 198 ELLIRTSGEQRISNFLIWQISYSEFIFDQKLWPDFDEDELKNCIKIYQKRQRRFGGL 254
>gi|146321816|ref|YP_001201527.1| undecaprenyl pyrophosphate synthase [Streptococcus suis 98HAH33]
gi|145692622|gb|ABP93127.1| Undecaprenyl pyrophosphate synthase [Streptococcus suis 98HAH33]
gi|292559233|gb|ADE32234.1| Di-trans-poly-cis-decaprenylcistransferase [Streptococcus suis GZ1]
Length = 261
Score = 291 bits (746), Expect = 5e-77, Method: Composition-based stats.
Identities = 106/234 (45%), Positives = 140/234 (59%), Gaps = 4/234 (1%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI +IMDGNGRWA R PR GH+ G++ ++ A+++G+K LT++AFS NW
Sbjct: 28 VPKHIAVIMDGNGRWAKKRMQPRIMGHKAGMDALQKVTKTASDLGVKVLTVYAFSTENWS 87
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ ++ L F K L NN+K+++IG+ L L L +AE +T+ NTG
Sbjct: 88 RPEKEVKFIMNLPVEFYDKYVPELHANNVKIQMIGDHSKLPVPTLNALYKAEQKTKGNTG 147
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLI 185
L L A NY RDE++RA+K I QD+ D+D LIA YL T + DPDL+
Sbjct: 148 LILNFALNYGGRDEVTRAVKAIAQDVLDAKFNPGDIDEKLIADYLYTGTLSPTLRDPDLV 207
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRT GE RLS+FL WQ AYSE F WPDF E A+ +YN R RRFGG+
Sbjct: 208 IRTSGELRLSNFLPWQTAYSELYFTDIAWPDFDGEALKLAIKEYNRRHRRFGGV 261
>gi|237729480|ref|ZP_04559961.1| undecaprenyl pyrophosphate synthetase [Citrobacter sp. 30_2]
gi|226909209|gb|EEH95127.1| undecaprenyl pyrophosphate synthetase [Citrobacter sp. 30_2]
Length = 252
Score = 291 bits (746), Expect = 5e-77, Method: Composition-based stats.
Identities = 90/239 (37%), Positives = 140/239 (58%), Gaps = 4/239 (1%)
Query: 6 MSSSPP----DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+S + P H+ IIMDGNGRWA +G R GH+ G + V+ AA GI LT++
Sbjct: 8 LSENLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIDALTLY 67
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+S L++L L +L ++N+++R+IG+ + + ++++E
Sbjct: 68 AFSSENWNRPAQEVSALMELFVWALDSEVKNLHRHNVRLRIIGDISRFNSRLQERIRKSE 127
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T NTGL L IA NY R +I + ++ + Q ++ G + +D ++ + + ++
Sbjct: 128 AITAQNTGLTLNIAANYGGRWDIVQGVRQLAQQVQDGVLHPEQIDEEMLGQQICMHELAP 187
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRTGGE R+S+FLLWQ+AY+E F WPDF + F AL+ + R+RRFGG
Sbjct: 188 VDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALHAFANRERRFGGTE 246
>gi|242278733|ref|YP_002990862.1| undecaprenyl diphosphate synthase [Desulfovibrio salexigens DSM
2638]
gi|242121627|gb|ACS79323.1| undecaprenyl diphosphate synthase [Desulfovibrio salexigens DSM
2638]
Length = 243
Score = 291 bits (746), Expect = 5e-77, Method: Composition-based stats.
Identities = 102/233 (43%), Positives = 136/233 (58%), Gaps = 4/233 (1%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI +IMDGNGRWA ARGL R GHR G E IV E+GI++LT++ FS NW
Sbjct: 14 MPRHIAVIMDGNGRWAQARGLSRSEGHRAGTEAARNIVTRCRELGIEHLTLYTFSKENWA 73
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP EIS L L+ FLKK SL++ +I+++V+G + V+ +T
Sbjct: 74 RPKDEISTLFDLLTVFLKKELSSLREQDIRLKVLGELSEFPFGVKQVVAHTIKKTENCKS 133
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ L +A NYS RDE+ RA K + + V D+ ++KYL T+ PDPDLIIRT
Sbjct: 134 MTLNLALNYSGRDELVRACKKMITE----GVSEDDITEESLSKYLYTAGQPDPDLIIRTS 189
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+RLS++LL+Q AYSE F YWPDF+ AL + R RRFG ++
Sbjct: 190 GEQRLSNYLLYQAAYSELYFTDIYWPDFTPAELDKALADFAGRQRRFGKTGEQ 242
>gi|289168686|ref|YP_003446955.1| undecaprenyl diphosphate synthase [Streptococcus mitis B6]
gi|288908253|emb|CBJ23095.1| undecaprenyl diphosphate synthase [Streptococcus mitis B6]
Length = 252
Score = 291 bits (746), Expect = 5e-77, Method: Composition-based stats.
Identities = 105/238 (44%), Positives = 136/238 (57%), Gaps = 4/238 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ + P HIGIIMDGNGRWA R PR GH+ G+E + AA ++G+K +T++AFS
Sbjct: 15 VPTQVPAHIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQTVTKAANKLGVKVITVYAFST 74
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+ ++ L F L NN+K+++IG L L +AE+ T+
Sbjct: 75 ENWTRPDQEVKFIMNLPVEFYDNYVPELHANNVKIQMIGETDRLPKQTFEALTKAEELTK 134
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----D 181
NTGL L A NY R EI++A+K I QD+ + D+ LI YL T +P D
Sbjct: 135 NNTGLILNFALNYGGRAEITQALKLISQDVLDAKINPGDITEELIGNYLFTQHLPKELRD 194
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDLIIRT GE RLS+FL WQ AYSE F WPDF A+ YN R RRFGG+
Sbjct: 195 PDLIIRTSGELRLSNFLPWQGAYSELYFTDTLWPDFDEIALQEAILAYNRRHRRFGGV 252
>gi|307822434|ref|ZP_07652666.1| undecaprenyl diphosphate synthase [Methylobacter tundripaludum
SV96]
gi|307737000|gb|EFO07845.1| undecaprenyl diphosphate synthase [Methylobacter tundripaludum
SV96]
Length = 262
Score = 291 bits (746), Expect = 5e-77, Method: Composition-based stats.
Identities = 102/232 (43%), Positives = 146/232 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA R +PR GH+ G++ +IV A+ ++ LT+FAFS NWRR
Sbjct: 22 PRHIAIIMDGNGRWAQKRFMPRAIGHQAGVKAVRKIVEYCAKQEVEVLTLFAFSSENWRR 81
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+ L + L++ L +NNI++R IG+R + D + + E E QT+ N L
Sbjct: 82 PDEEVSLLMGLFMATLQREINKLDRNNIRLRFIGDRTAFSDKLQTKMAEGEAQTKDNNAL 141
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R ++ +A + + I SG + D++ LI +YL T+D+P+PDL IRTGG
Sbjct: 142 TLVIAANYGGRWDLCQAFRTVAGKIASGELKDQDINEQLINQYLSTADLPEPDLFIRTGG 201
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FLLWQ+AY+E F WPDF + A+N + R RRFG ++
Sbjct: 202 EQRVSNFLLWQLAYTELYFTATLWPDFDQNSLEEAINSFKSRQRRFGHTGEQ 253
>gi|168485973|ref|ZP_02710481.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae CDC1087-00]
gi|183570872|gb|EDT91400.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae CDC1087-00]
Length = 252
Score = 291 bits (745), Expect = 5e-77, Method: Composition-based stats.
Identities = 104/238 (43%), Positives = 136/238 (57%), Gaps = 4/238 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ + P HIGIIMDGNGRWA R PR GH+ G+E + AA ++G+K +T++AFS
Sbjct: 15 VPTQVPAHIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQTVTKAANKLGVKVITVYAFST 74
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+ ++ L F L NN+++++IG L L +AE+ T+
Sbjct: 75 ENWTRPDQEVKFIMNLPVEFYDNYVPELHANNVRIQMIGETDRLPKQTFEALTKAEELTK 134
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----D 181
NTGL L A NY R EI++A+K I QD+ + D+ LI YL T +P D
Sbjct: 135 NNTGLILNFALNYGGRAEITQALKLISQDVLDAKINPGDITEELIGNYLFTQHLPKDLRD 194
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDLIIRT GE RLS+FL WQ AYSE F WPDF A+ YN R RRFGG+
Sbjct: 195 PDLIIRTSGELRLSNFLPWQGAYSELYFTDTLWPDFDEAALQEAILAYNRRHRRFGGV 252
>gi|260596594|ref|YP_003209165.1| undecaprenyl pyrophosphate synthase [Cronobacter turicensis z3032]
gi|260215771|emb|CBA28187.1| Undecaprenyl pyrophosphate synthetase [Cronobacter turicensis
z3032]
Length = 252
Score = 291 bits (745), Expect = 5e-77, Method: Composition-based stats.
Identities = 94/242 (38%), Positives = 144/242 (59%), Gaps = 4/242 (1%)
Query: 6 MSSSPP----DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+S + P H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++
Sbjct: 8 LSENLPAHGARHVAIIMDGNGRWAKRQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY 67
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+S L++L L SL ++N+++RVIG+ + + + +AE
Sbjct: 68 AFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRVIGDISRFNTRLQDRIHKAE 127
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T N+GL L IA NY R +I + ++++ ++ G + +D +++K + +++
Sbjct: 128 ALTSQNSGLTLNIAANYGGRWDIIQGVQHLAAQVQEGLLRPDQIDEEMLSKQICMNELAP 187
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRTGGE R+S+FLLWQ+AY+E F WPDF + F ALN + R+RRFGG +
Sbjct: 188 VDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGGTAP 247
Query: 242 KG 243
G
Sbjct: 248 GG 249
>gi|322374999|ref|ZP_08049513.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sp. C300]
gi|321280499|gb|EFX57538.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sp. C300]
Length = 252
Score = 291 bits (745), Expect = 5e-77, Method: Composition-based stats.
Identities = 103/238 (43%), Positives = 139/238 (58%), Gaps = 4/238 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ + P HIGIIMDGNGRWA R PR GH+ G+E ++ AA ++G+K +T++AFS
Sbjct: 15 VPTQVPAHIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQKVTKAANKMGVKVITVYAFST 74
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+ ++ L F L NN+K+++IG L LK+AE+ T+
Sbjct: 75 ENWTRPDQEVKFIMNLPVEFYDNYVPELHANNVKIQMIGETDRLPKQTFEALKKAEELTK 134
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----D 181
NTGL L A NY R EI++A+K + QD+ + D+ +I YL T +P D
Sbjct: 135 NNTGLILNFALNYGGRAEITQALKGLAQDVLDAKINPGDITEDMIGDYLFTQHLPKDLRD 194
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDLIIRT GE RLS+FL WQ AYSE F WPDF A+ +N R+RRFGG+
Sbjct: 195 PDLIIRTSGELRLSNFLPWQAAYSELYFTDTLWPDFDEAALQEAIAAFNHRNRRFGGV 252
>gi|239832045|ref|ZP_04680374.1| undecaprenyl diphosphate synthase [Ochrobactrum intermedium LMG
3301]
gi|239824312|gb|EEQ95880.1| undecaprenyl diphosphate synthase [Ochrobactrum intermedium LMG
3301]
Length = 261
Score = 291 bits (745), Expect = 5e-77, Method: Composition-based stats.
Identities = 121/233 (51%), Positives = 160/233 (68%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA AR LPR AGHR G+E E V AA + G+ LT+FAFS NW R
Sbjct: 10 PRHIAIIMDGNGRWAKARNLPRSAGHRAGVEALRETVRAAGDRGLGYLTLFAFSSENWSR 69
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+++L+ L+K F+++ L +NN++V +IG R L DI +L EAE T NTGL
Sbjct: 70 PSGEVNDLLGLLKIFIRRDLAELHRNNVRVSIIGEREELAPDIRTLLVEAETLTHRNTGL 129
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL IAFNY SRDEI RA++++ +D+ +G + + + LI+ LDT+ +PDPDLIIRT G
Sbjct: 130 NLIIAFNYGSRDEIVRAVRSLARDVAAGLLDPASISAELISANLDTAGIPDPDLIIRTSG 189
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
E RLS+FLLWQ AYSEF+F+P +WPDF A + + R+RRFGG+ +
Sbjct: 190 EMRLSNFLLWQAAYSEFLFLPIHWPDFRSSDLDAAYDAFRQRERRFGGVEVRA 242
>gi|116622347|ref|YP_824503.1| undecaprenyl pyrophosphate synthetase [Candidatus Solibacter
usitatus Ellin6076]
gi|116225509|gb|ABJ84218.1| Undecaprenyl pyrophosphate synthetase [Candidatus Solibacter
usitatus Ellin6076]
Length = 279
Score = 291 bits (745), Expect = 5e-77, Method: Composition-based stats.
Identities = 102/241 (42%), Positives = 145/241 (60%), Gaps = 1/241 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ ++ + P HI IIMDGNGRWA R LPR AGH+ GI V A +G+K LT+
Sbjct: 17 LARAIDPARLPAHIAIIMDGNGRWAGRRLLPRVAGHKAGIGPVRSTVETCARLGVKALTL 76
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS+ NW+RP +E+ L +L++ +LK+ L+KN+I+++ IG +L + L A
Sbjct: 77 YAFSVENWKRPRAEVETLWRLLRYYLKQELPDLQKNDIRLQAIGRLDALPMQVRRELDSA 136
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSV-CSHDVDSSLIAKYLDTSDV 179
+ T N GL + +A NY R EI A+ +I + + +D LIA L T+
Sbjct: 137 VESTSANRGLLVNLAINYGGRAEIVDAVNSILEMARLEGSLDTLKMDEDLIATSLYTASC 196
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDPDL+IRT GE R+S+FLLWQ+AY+E WPDF+R A+ +Y RDRR+GGL
Sbjct: 197 PDPDLLIRTSGEMRISNFLLWQIAYAELYVTETLWPDFTRTDLLRAVLEYQKRDRRYGGL 256
Query: 240 S 240
S
Sbjct: 257 S 257
>gi|325290372|ref|YP_004266553.1| Undecaprenyl pyrophosphate synthetase [Syntrophobotulus glycolicus
DSM 8271]
gi|324965773|gb|ADY56552.1| Undecaprenyl pyrophosphate synthetase [Syntrophobotulus glycolicus
DSM 8271]
Length = 271
Score = 291 bits (745), Expect = 5e-77, Method: Composition-based stats.
Identities = 105/233 (45%), Positives = 152/233 (65%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P+HI IIMDGNGRWA +G+PR GHR G+E +V E+G+K LT++AFS NW
Sbjct: 36 NIPEHIAIIMDGNGRWAQKKGMPRGIGHRAGLEALKAVVRCCDEIGVKYLTVYAFSTENW 95
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP SEI L+ L+K +LK+ L N++++RV G L D+ + +A +T+ N
Sbjct: 96 KRPQSEIGILMSLLKEYLKRELMELVANHVQIRVSGEIEQLPKDVYEDVLQACQKTKNND 155
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL +A NY R EI +A++ I Q++ +G + +++ +I +L T+ +PDP+L+IRT
Sbjct: 156 GLVFNLALNYGGRSEIVKAVREIAQEVRNGEISVQEINEKIIEDHLYTASIPDPELLIRT 215
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
GE RLS+FLLWQVAYSE V EYWPDF + +A+ Y R+RRFGG+ K
Sbjct: 216 SGEMRLSNFLLWQVAYSEIVVAEEYWPDFKEKSLLNAIEIYQNRERRFGGIMK 268
>gi|315612427|ref|ZP_07887340.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sanguinis
ATCC 49296]
gi|315315408|gb|EFU63447.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sanguinis
ATCC 49296]
Length = 252
Score = 291 bits (745), Expect = 5e-77, Method: Composition-based stats.
Identities = 103/238 (43%), Positives = 140/238 (58%), Gaps = 4/238 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ + P HIGIIMDGNGRWA R PR GH+ G+E ++ AA ++G+K +T++AFS
Sbjct: 15 VPTQVPAHIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQKVTKAANKMGVKVITVYAFST 74
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+ ++ L F L NN+K+++IG L LK+AE+ T+
Sbjct: 75 ENWTRPDQEVKFIMNLPVEFYDNYVPELHANNVKIQMIGETNRLPKPTFEALKKAEELTK 134
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----D 181
NTGL L A NY R EI++A+K++ QD+ + D+ +I YL T +P D
Sbjct: 135 NNTGLILNFALNYGGRAEITQALKSLAQDVLDAKINPGDITEDMIGDYLFTQHLPKDLRD 194
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDLIIRT GE RLS+FL WQ AYSE F WPDF A+ +N R+RRFGG+
Sbjct: 195 PDLIIRTSGELRLSNFLPWQAAYSELYFTDTLWPDFDEAALQEAIAAFNHRNRRFGGV 252
>gi|261253724|ref|ZP_05946297.1| undecaprenyl pyrophosphate synthetase [Vibrio orientalis CIP
102891]
gi|260937115|gb|EEX93104.1| undecaprenyl pyrophosphate synthetase [Vibrio orientalis CIP
102891]
Length = 251
Score = 291 bits (745), Expect = 5e-77, Method: Composition-based stats.
Identities = 98/240 (40%), Positives = 149/240 (62%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ + P HI IIMDGNGRWA A+G PR GH+ G+ + ++ +A++GIK +T+FA
Sbjct: 4 SQLSPDLLPKHIAIIMDGNGRWAKAQGKPRVFGHKNGVAAVRKAISTSAKLGIKAITLFA 63
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP E+ L++L S L L KNN+++RVIG++ +D + + +AE
Sbjct: 64 FSSENWRRPEEEVGVLMELFISVLSTEVKKLHKNNLRLRVIGDKSRFNDRLQKKIAQAEA 123
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTG+ + IA NY + +I +A K I + +G + + DV LI ++L +D+P+
Sbjct: 124 LTESNTGMVINIAANYGGKWDIMQATKAISAKVANGELKAEDVSEELITEHLTMADLPEV 183
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL+IRT GE R+S+F+LWQ+AY+E F P YWP+F A+ + R+RRFG ++
Sbjct: 184 DLMIRTSGECRISNFMLWQMAYAELYFTPVYWPEFDENSLIEAVTWFVNRERRFGCTGEQ 243
>gi|302879000|ref|YP_003847564.1| undecaprenyl diphosphate synthase [Gallionella capsiferriformans
ES-2]
gi|302581789|gb|ADL55800.1| undecaprenyl diphosphate synthase [Gallionella capsiferriformans
ES-2]
Length = 261
Score = 291 bits (745), Expect = 6e-77, Method: Composition-based stats.
Identities = 99/235 (42%), Positives = 139/235 (59%), Gaps = 3/235 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+ P HI IIMDGNGRWA R +PR GH++G+E V A ++G++ LT+FAFS N
Sbjct: 15 ARVPRHIAIIMDGNGRWAKQRFMPRIMGHQRGVESLRAAVRACRDLGVQYLTVFAFSSEN 74
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRPV E+S L+ L L++ SL KNNI++++IG+R D+ + + AE T N
Sbjct: 75 WRRPVDEVSFLMSLFLKMLEREVASLHKNNIRLKIIGDRSRFDEKLQNTMSHAESLTAGN 134
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
TGL L IA NY R ++ A++ + + + YL D P+PDL IR
Sbjct: 135 TGLTLTIAANYGGRWDMMAAVQRLLSVHPELATS---FTEDDLQPYLSMGDAPEPDLFIR 191
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE R+S+F+LWQ+AY+E F WP F R+ A+ Y R+RRFG S++
Sbjct: 192 TGGEMRISNFMLWQLAYTELYFTDTLWPVFDRKELEKAIASYQNRERRFGRTSEQ 246
>gi|291547839|emb|CBL20947.1| undecaprenyl diphosphate synthase [Ruminococcus sp. SR1/5]
Length = 235
Score = 291 bits (745), Expect = 6e-77, Method: Composition-based stats.
Identities = 109/234 (46%), Positives = 154/234 (65%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P+HI II+DGNGRWA RG+PR GH KG I ++G+K LT++AFS NW
Sbjct: 2 NVPNHIAIILDGNGRWAKERGMPRTYGHVKGCANLENICYDIKDLGVKYLTVYAFSTENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+R E+ L+KL + +LKK KKNN+K++VIG+ + DI ++E E+ ++
Sbjct: 62 KRSREEVEALMKLFRGYLKKCIKISKKNNMKMKVIGDVTAFAPDIQQSVRELEEYSKDFD 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
G+ +A NY SRDEI R ++ + QD++ G V + I YLDT+ VPDPDL+IRT
Sbjct: 122 GIYFQLALNYGSRDEIRRGMQKMAQDVKDGKVEPDGITEDTIESYLDTAGVPDPDLLIRT 181
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+RLS+FLLWQ+AYSEF F P WPDF++E A+ +YN RDRR+GG+ ++
Sbjct: 182 SGEQRLSNFLLWQLAYSEFYFTPVAWPDFNKEELIKAIEKYNQRDRRYGGVKEE 235
>gi|330833578|ref|YP_004402403.1| undecaprenyl pyrophosphate synthase [Streptococcus suis ST3]
gi|329307801|gb|AEB82217.1| undecaprenyl pyrophosphate synthase [Streptococcus suis ST3]
Length = 251
Score = 291 bits (745), Expect = 6e-77, Method: Composition-based stats.
Identities = 106/234 (45%), Positives = 140/234 (59%), Gaps = 4/234 (1%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI +IMDGNGRWA R PR GH+ G++ ++ A+++G+K LT++AFS NW
Sbjct: 18 VPKHIAVIMDGNGRWAKKRMQPRIMGHKAGMDALQKVTKTASDLGVKVLTVYAFSTENWS 77
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ ++ L F K L NN+K+++IG+ L L L +AE +T+ NTG
Sbjct: 78 RPEKEVKFIMNLPVEFYDKYVPELHANNVKIQMIGDHSKLPVPTLNALYKAEQKTKSNTG 137
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLI 185
L L A NY RDE++RA+K I QD+ D+D LIA YL T + DPDL+
Sbjct: 138 LILNFALNYGGRDEVTRAVKAIAQDVLDAKFNPGDIDEKLIADYLYTGTLSPTLRDPDLV 197
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRT GE RLS+FL WQ AYSE F WPDF E A+ +YN R RRFGG+
Sbjct: 198 IRTSGELRLSNFLPWQTAYSELYFTDIAWPDFDGEALKLAIKEYNRRHRRFGGV 251
>gi|15900195|ref|NP_344799.1| undecaprenyl pyrophosphate synthase [Streptococcus pneumoniae
TIGR4]
gi|111658325|ref|ZP_01409014.1| hypothetical protein SpneT_02000515 [Streptococcus pneumoniae
TIGR4]
gi|116515541|ref|YP_815761.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae D39]
gi|148983666|ref|ZP_01816985.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
SP3-BS71]
gi|148988001|ref|ZP_01819464.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
SP6-BS73]
gi|148994603|ref|ZP_01823745.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
SP9-BS68]
gi|148996685|ref|ZP_01824403.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
SP11-BS70]
gi|149011131|ref|ZP_01832436.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
SP19-BS75]
gi|168484643|ref|ZP_02709595.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae CDC1873-00]
gi|168489736|ref|ZP_02713935.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae SP195]
gi|168492216|ref|ZP_02716359.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae CDC0288-04]
gi|168493957|ref|ZP_02718100.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae CDC3059-06]
gi|168576312|ref|ZP_02722195.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae MLV-016]
gi|169833071|ref|YP_001693789.1| undecaprenyl pyrophosphate synthase [Streptococcus pneumoniae
Hungary19A-6]
gi|221231162|ref|YP_002510314.1| undecaprenyl pyrophosphate synthetase [Streptococcus pneumoniae
ATCC 700669]
gi|225853861|ref|YP_002735373.1| undecaprenyl pyrophosphate synthase [Streptococcus pneumoniae JJA]
gi|225856019|ref|YP_002737530.1| undecaprenyl pyrophosphate synthase [Streptococcus pneumoniae
P1031]
gi|225858111|ref|YP_002739621.1| undecaprenyl pyrophosphate synthase [Streptococcus pneumoniae
70585]
gi|225860298|ref|YP_002741807.1| undecaprenyl pyrophosphate synthase [Streptococcus pneumoniae
Taiwan19F-14]
gi|237649669|ref|ZP_04523921.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae CCRI
1974]
gi|237821369|ref|ZP_04597214.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae CCRI
1974M2]
gi|298229646|ref|ZP_06963327.1| undecaprenyl pyrophosphate synthase [Streptococcus pneumoniae str.
Canada MDR_19F]
gi|298256041|ref|ZP_06979627.1| undecaprenyl pyrophosphate synthase [Streptococcus pneumoniae str.
Canada MDR_19A]
gi|298502079|ref|YP_003724019.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
TCH8431/19A]
gi|307066939|ref|YP_003875905.1| Undecaprenyl pyrophosphate synthase [Streptococcus pneumoniae
AP200]
gi|307704116|ref|ZP_07641044.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus mitis
SK597]
gi|307709957|ref|ZP_07646404.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus mitis
SK564]
gi|42559976|sp|Q8DRB3|UPPS_STRR6 RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|42560007|sp|Q97SR4|UPPS_STRPN RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|14971731|gb|AAK74439.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae TIGR4]
gi|116076117|gb|ABJ53837.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae D39]
gi|147757260|gb|EDK64299.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
SP11-BS70]
gi|147764767|gb|EDK71697.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
SP19-BS75]
gi|147923813|gb|EDK74925.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
SP3-BS71]
gi|147926465|gb|EDK77538.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
SP6-BS73]
gi|147927133|gb|EDK78171.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
SP9-BS68]
gi|168995573|gb|ACA36185.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae Hungary19A-6]
gi|172042174|gb|EDT50220.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae CDC1873-00]
gi|183571829|gb|EDT92357.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae SP195]
gi|183573578|gb|EDT94106.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae CDC0288-04]
gi|183576180|gb|EDT96708.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae CDC3059-06]
gi|183577835|gb|EDT98363.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae MLV-016]
gi|220673622|emb|CAR68109.1| undecaprenyl pyrophosphate synthetase [Streptococcus pneumoniae
ATCC 700669]
gi|225722059|gb|ACO17913.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae 70585]
gi|225723062|gb|ACO18915.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae JJA]
gi|225725417|gb|ACO21269.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae P1031]
gi|225727833|gb|ACO23684.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae Taiwan19F-14]
gi|298237674|gb|ADI68805.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
TCH8431/19A]
gi|301793529|emb|CBW35904.1| undecaprenyl pyrophosphate synthetase [Streptococcus pneumoniae
INV104]
gi|301799404|emb|CBW31941.1| undecaprenyl pyrophosphate synthetase [Streptococcus pneumoniae
OXC141]
gi|301801202|emb|CBW33876.1| undecaprenyl pyrophosphate synthetase [Streptococcus pneumoniae
INV200]
gi|306408476|gb|ADM83903.1| Undecaprenyl pyrophosphate synthase [Streptococcus pneumoniae
AP200]
gi|307619328|gb|EFN98457.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus mitis
SK564]
gi|307622338|gb|EFO01347.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus mitis
SK597]
gi|327390678|gb|EGE89018.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae GA04375]
gi|332075926|gb|EGI86393.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae GA17570]
gi|332077563|gb|EGI88024.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae GA41301]
gi|332202175|gb|EGJ16244.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae GA41317]
gi|332203427|gb|EGJ17494.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae GA47368]
Length = 252
Score = 291 bits (745), Expect = 6e-77, Method: Composition-based stats.
Identities = 105/238 (44%), Positives = 136/238 (57%), Gaps = 4/238 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ + P HIGIIMDGNGRWA R PR GH+ G+E + AA ++G+K +T++AFS
Sbjct: 15 VPTQVPAHIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQTVTKAANKLGVKVITVYAFST 74
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+ ++ L F L NN+K+++IG L L +AE+ T+
Sbjct: 75 ENWTRPDQEVKFIMNLPVEFYDNYVPELHANNVKIQMIGETDRLPKQTFEALTKAEELTK 134
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----D 181
NTGL L A NY R EI++A+K I QD+ + D+ LI YL T +P D
Sbjct: 135 NNTGLILNFALNYGGRAEITQALKLISQDVLDAKINPGDITEELIGNYLFTQHLPKDLRD 194
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDLIIRT GE RLS+FL WQ AYSE F WPDF A+ YN R RRFGG+
Sbjct: 195 PDLIIRTSGELRLSNFLPWQGAYSELYFTDTLWPDFDEAALQEAILAYNRRHRRFGGV 252
>gi|71279416|ref|YP_268299.1| undecaprenyl diphosphate synthase [Colwellia psychrerythraea 34H]
gi|71145156|gb|AAZ25629.1| undecaprenyl diphosphate synthase [Colwellia psychrerythraea 34H]
Length = 254
Score = 291 bits (745), Expect = 6e-77, Method: Composition-based stats.
Identities = 96/243 (39%), Positives = 148/243 (60%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+V + S P H+ IIMDGNGRWA +G R AGH+ G+E ++VA A + +K LT+
Sbjct: 7 LVEQTDNKSIPQHVAIIMDGNGRWAQLQGKGRVAGHKAGVESVRQVVATARKSNVKALTL 66
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW+RP E+S L+ L L K L K+NI+ +V+G+ D + + ++
Sbjct: 67 FAFSSENWQRPAKEVSVLMDLFMYVLTKEVKRLHKHNIRFQVVGDLSRFSDKLQKNIAKS 126
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E T NTGL L IA NY R +I++A K + D++ G++ D++ + ++ +++P
Sbjct: 127 EQLTADNTGLVLSIAANYGGRWDIAQAAKKLASDVKQGTMSLDDINEETLNEHTCLANLP 186
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRTGG+ R+S+FLLWQ AY+E F WPDF+ F A++ ++ R+RRFG
Sbjct: 187 TLDLLIRTGGDYRISNFLLWQAAYAELYFTDTLWPDFNEVQFLEAMSCFDHRERRFGKTG 246
Query: 241 KKG 243
++
Sbjct: 247 EQA 249
>gi|320159760|ref|YP_004172984.1| undecaprenyl pyrophosphate synthetase [Anaerolinea thermophila
UNI-1]
gi|319993613|dbj|BAJ62384.1| undecaprenyl pyrophosphate synthetase [Anaerolinea thermophila
UNI-1]
Length = 249
Score = 291 bits (745), Expect = 6e-77, Method: Composition-based stats.
Identities = 105/235 (44%), Positives = 149/235 (63%), Gaps = 4/235 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+ P H+ +IMDGNGRWA RGLPR AGHR G E I+ A+ E G+K LTI+AFS N
Sbjct: 11 TKVPVHVAMIMDGNGRWAQKRGLPRLAGHRAGTENLRRIIRASVEFGVKYLTIYAFSTEN 70
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP E+ L+ +++ + + L + +++R +G+ L + + A ++TR N
Sbjct: 71 WGRPQEEVEGLLHILEEVIDRELDELDQQGVQLRHLGHLDRLPAMLQEKIIRAVERTRDN 130
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L L +AFNY RDEI AI+ + +D SV +V L+++YL T+D+PDPDLIIR
Sbjct: 131 DRLILSVAFNYGGRDEIVCAIRAMMRD----SVKPEEVTPELVSRYLFTADLPDPDLIIR 186
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
T GE R+S+FL+WQ AYSE+ P WPDF RE + AL +Y+ R+RRFG L+ +
Sbjct: 187 TSGEMRVSNFLIWQSAYSEWYVTPVLWPDFDREEYLKALIEYSHRERRFGKLTAQ 241
>gi|86749941|ref|YP_486437.1| undecaprenyl diphosphate synthase [Rhodopseudomonas palustris HaA2]
gi|86572969|gb|ABD07526.1| Undecaprenyl pyrophosphate synthetase [Rhodopseudomonas palustris
HaA2]
Length = 252
Score = 291 bits (745), Expect = 6e-77, Method: Composition-based stats.
Identities = 119/233 (51%), Positives = 162/233 (69%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IIMDGNGRWAAARGLPR GHR+G+E +V AA ++GI+ LTIF+FS NW
Sbjct: 17 IPAHVAIIMDGNGRWAAARGLPRAEGHRRGVEALRRVVRAANDIGIQYLTIFSFSSENWT 76
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP SEI +L L++ F++ SL ++ ++VRVIG R L+ D+ +L EA++ TR NT
Sbjct: 77 RPKSEIGDLFGLLRRFIRNDLASLHRDGVRVRVIGERDRLERDLCAMLDEAQELTRDNTK 136
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
LNL +AFNY SR EI+ A + + +++ G +D + +YLD D+PDPDLIIRT
Sbjct: 137 LNLVVAFNYGSRQEIANAAQRLAREVAEGKRDPATIDIETLGRYLDAPDIPDPDLIIRTS 196
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+RLS+FL+WQ AYSE VF+P +WPDF + A+ +Y R+RRFGGL+ K
Sbjct: 197 GEQRLSNFLMWQAAYSELVFVPIHWPDFDKAALEGAIAEYARRERRFGGLAAK 249
>gi|91977323|ref|YP_569982.1| undecaprenyl diphosphate synthase [Rhodopseudomonas palustris
BisB5]
gi|91683779|gb|ABE40081.1| Undecaprenyl pyrophosphate synthetase [Rhodopseudomonas palustris
BisB5]
Length = 252
Score = 291 bits (745), Expect = 6e-77, Method: Composition-based stats.
Identities = 119/233 (51%), Positives = 162/233 (69%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IIMDGNGRWAAARGLPR GHR+G+E +V AA E+GI+ LTIF+FS NW
Sbjct: 17 IPAHVAIIMDGNGRWAAARGLPRAEGHRRGVEALRRVVRAANEIGIQYLTIFSFSSENWA 76
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP +EI +L L++ F++ SL ++ ++VRVIG R LD D+ +L EA++ T+ NT
Sbjct: 77 RPATEIGDLFGLLRRFIRNDLASLHRDGVRVRVIGERDRLDRDLCAMLDEAQELTQNNTK 136
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
LNL +AFNY SR EI+ A + + +++ G +D + +YLD D+PDPDLIIRT
Sbjct: 137 LNLVVAFNYGSRQEIANAAQRLAREVAEGKRDPATIDIETLGRYLDAPDIPDPDLIIRTS 196
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+RLS+FL+WQ AYSE VF+P +WPDF + A+ +Y R+RRFGGL+ K
Sbjct: 197 GEQRLSNFLMWQAAYSELVFVPIHWPDFDKAALEGAIAEYARRERRFGGLAAK 249
>gi|317490130|ref|ZP_07948619.1| di-trans,poly-cis-decaprenylcistransferase [Eggerthella sp.
1_3_56FAA]
gi|325833614|ref|ZP_08166063.1| di-trans,poly-cis-decaprenylcistransferase [Eggerthella sp. HGA1]
gi|316910835|gb|EFV32455.1| di-trans,poly-cis-decaprenylcistransferase [Eggerthella sp.
1_3_56FAA]
gi|325485538|gb|EGC88007.1| di-trans,poly-cis-decaprenylcistransferase [Eggerthella sp. HGA1]
Length = 259
Score = 291 bits (745), Expect = 6e-77, Method: Composition-based stats.
Identities = 91/241 (37%), Positives = 140/241 (58%), Gaps = 3/241 (1%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ + +++ P H+ +IMDGNGRWA RG R GH+ GIE E + A++VG++ LTI++
Sbjct: 19 SQLDAAAVPQHVAVIMDGNGRWAKERGKNRLFGHKAGIEAVRETIRCASDVGVRYLTIYS 78
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW+RP E+ L+ L + + L + +++V IG L +A +
Sbjct: 79 FSSENWKRPQDEVIGLMNLFATTMLAEVDGLHEEHVRVMTIGRTDELPKKTRDAFAKAWE 138
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNI---FQDIESGSVCSHDVDSSLIAKYLDTSDV 179
+T+ N G+ L +A NY R E+ A+++ + + ++++L T+D+
Sbjct: 139 KTKDNDGMTLVVAVNYGGRVELLDAMRSYMDGAHAALREGREPEPLSEATLSRHLYTADI 198
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDPDL+IRT GE R+S+FLLWQ+AYSEFV WPDF R F AL ++ RDRRFG +
Sbjct: 199 PDPDLLIRTSGEMRVSNFLLWQIAYSEFVCTETLWPDFDRYEFLRALLEFQSRDRRFGAV 258
Query: 240 S 240
Sbjct: 259 K 259
>gi|317970386|ref|ZP_07971776.1| undecaprenyl pyrophosphate synthase [Synechococcus sp. CB0205]
Length = 264
Score = 291 bits (745), Expect = 6e-77, Method: Composition-based stats.
Identities = 89/240 (37%), Positives = 138/240 (57%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + ++ P H+ +IMDGNGRWA R LPR GHR+G+E + ++ GI +LT
Sbjct: 21 LPPGLETARLPAHVAVIMDGNGRWAGQRKLPRVMGHREGVEALKRTLRLCSDWGIGSLTA 80
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP E+S L+ L + L +L++ +++R +G+ L + + ++++A
Sbjct: 81 YAFSTENWNRPCEEVSFLMTLFERVLANELKALEQEQVRIRFLGDLEQLPEGLQQLIQDA 140
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+T NTG+ + NY R E+ RA + + Q++ SG +D A L T+
Sbjct: 141 TQRTASNTGIRFNVCTNYGGRRELVRAARLLAQEVASGERDPESIDEQAFASKLLTAGES 200
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GE+R+S+FLLWQ+AY+E WPDF AL + R RRFGG++
Sbjct: 201 DPDLLIRTSGEQRISNFLLWQLAYAELHITDVLWPDFDETALVSALMDFQNRQRRFGGVA 260
>gi|237742319|ref|ZP_04572800.1| undecaprenyl pyrophosphate synthetase [Fusobacterium sp. 4_1_13]
gi|229429967|gb|EEO40179.1| undecaprenyl pyrophosphate synthetase [Fusobacterium sp. 4_1_13]
Length = 230
Score = 291 bits (745), Expect = 6e-77, Method: Composition-based stats.
Identities = 98/235 (41%), Positives = 142/235 (60%), Gaps = 7/235 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M + P+HI IIMDGNGRWA RGL R GH +G + + + E+G+K LT++AFS
Sbjct: 1 MKKNVPNHIAIIMDGNGRWAKKRGLARSFGHMEGAKTLRKALEYLTEIGVKYLTVYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+S L+KL ++K ++ KN I+ V G + ++ + + +++ E++T+
Sbjct: 61 ENWNRPQDEVSTLMKLFLKYIKSERKNMMKNKIRFFVSGRKNNVPEKLQKEIEKLEEETK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N + L IAFNY SR EI A+ I +D + ++ +KYL +D PDPDL+
Sbjct: 121 NNNKITLNIAFNYGSRAEIVDAVNKIIKDGK------ENITEKDFSKYLY-NDFPDPDLV 173
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IRT GE R+S+FLLWQ+AYSE WPDF + A+ YN R+RRFGG+
Sbjct: 174 IRTSGEMRISNFLLWQIAYSELYITDTLWPDFDEKEIDKAIESYNQRERRFGGVK 228
>gi|323497980|ref|ZP_08102989.1| undecaprenyl pyrophosphate synthase [Vibrio sinaloensis DSM 21326]
gi|323317025|gb|EGA70027.1| undecaprenyl pyrophosphate synthase [Vibrio sinaloensis DSM 21326]
Length = 251
Score = 291 bits (745), Expect = 7e-77, Method: Composition-based stats.
Identities = 94/240 (39%), Positives = 148/240 (61%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ + P HI IIMDGNGRWA A+G PR GH+ G+ + ++ +A++GIK +T+FA
Sbjct: 4 SQLSPDVLPQHIAIIMDGNGRWAKAQGKPRVFGHKNGVAAVRKAISTSAKLGIKAITLFA 63
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP E+ L++L + L L KNN+++RVIG+ +D + + +AE+
Sbjct: 64 FSSENWRRPEEEVGVLMELFITVLSTEIKKLHKNNLRLRVIGDTSRFNDRLRKKIAQAEE 123
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T N+G+ + IA NY + +I +A K + + G + + D+ +I ++L SD+P+
Sbjct: 124 LTAGNSGMVVNIAANYGGKWDIMQATKALAAKVAQGELQADDITEDMITQHLTMSDLPEV 183
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL+IRT GE R+S+F+LWQ+AY+E F P YWP+F A+ + R+RRFG ++
Sbjct: 184 DLMIRTSGECRISNFMLWQMAYAEMYFTPIYWPEFDENSLVEAVTWFVNRERRFGCTGEQ 243
>gi|182683241|ref|YP_001834988.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae CGSP14]
gi|182628575|gb|ACB89523.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae CGSP14]
Length = 258
Score = 291 bits (745), Expect = 7e-77, Method: Composition-based stats.
Identities = 105/238 (44%), Positives = 136/238 (57%), Gaps = 4/238 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ + P HIGIIMDGNGRWA R PR GH+ G+E + AA ++G+K +T++AFS
Sbjct: 21 VPTQVPAHIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQTVTKAANKLGVKVITVYAFST 80
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+ ++ L F L NN+K+++IG L L +AE+ T+
Sbjct: 81 ENWTRPDQEVKFIMNLPVEFYDNYVPELHANNVKIQMIGETDRLPKQTFEALTKAEELTK 140
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----D 181
NTGL L A NY R EI++A+K I QD+ + D+ LI YL T +P D
Sbjct: 141 NNTGLILNFALNYGGRAEITQALKLISQDVLDAKINPGDITEELIGNYLFTQHLPKDLRD 200
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDLIIRT GE RLS+FL WQ AYSE F WPDF A+ YN R RRFGG+
Sbjct: 201 PDLIIRTSGELRLSNFLPWQGAYSELYFTDTLWPDFDEVALQEAILAYNRRHRRFGGV 258
>gi|296327939|ref|ZP_06870474.1| Di-trans,poly-cis-decaprenylcistransferase [Fusobacterium nucleatum
subsp. nucleatum ATCC 23726]
gi|296154895|gb|EFG95677.1| Di-trans,poly-cis-decaprenylcistransferase [Fusobacterium nucleatum
subsp. nucleatum ATCC 23726]
Length = 230
Score = 291 bits (745), Expect = 7e-77, Method: Composition-based stats.
Identities = 98/235 (41%), Positives = 141/235 (60%), Gaps = 7/235 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M + P HI IIMDGNGRWA RGL R GH +G + + + E+G+K LT++AFS
Sbjct: 1 MEKNIPKHIAIIMDGNGRWAKKRGLARSFGHMEGAKTLRKALEYLTEIGVKYLTVYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+S L+KL ++K ++ KN I+ V G + ++ + + +++ E++T+
Sbjct: 61 ENWNRPQEEVSTLMKLFLKYIKNERKNMMKNKIRFFVSGRKNNVPEKLQKEIEKLEEETK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N + L IAFNY SR EI A+ I +D + ++ +KYL +D PDPDL+
Sbjct: 121 NNDKITLNIAFNYGSRAEIVDAVNRIIKDGK------ENITEEDFSKYLY-NDFPDPDLV 173
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IRT GE R+S+FLLWQ+AYSE WPDF + A+ YN R+RRFGG+
Sbjct: 174 IRTSGEMRISNFLLWQIAYSELYITDVLWPDFDEKEIDKAIESYNQRERRFGGVK 228
>gi|258627354|ref|ZP_05722138.1| Undecaprenyl diphosphate synthase [Vibrio mimicus VM603]
gi|258580392|gb|EEW05357.1| Undecaprenyl diphosphate synthase [Vibrio mimicus VM603]
Length = 250
Score = 291 bits (745), Expect = 7e-77, Method: Composition-based stats.
Identities = 89/239 (37%), Positives = 147/239 (61%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S+ P HI +IMDGNGRWA A+G PR GH+ G+ + ++ +A +G+K +T+FAF
Sbjct: 5 SISQDVLPKHIAVIMDGNGRWAKAQGKPRVFGHKNGVAAVRKTISTSARLGVKAVTLFAF 64
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRRP E+ L++L + L L KNN+++RVIG++ + + + +AE
Sbjct: 65 SSENWRRPEEEVGVLMELFITVLSTEIKKLHKNNLRLRVIGDKSRFSERLQSKIAQAEAL 124
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NTG+ + A NY + +I +A + + + + G + ++D ++I ++L +D+P+ D
Sbjct: 125 TASNTGMVVNTAANYGGKWDILQATQALAEKVAQGDLLPAEIDEAMIKQHLTMADLPEVD 184
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRT GE R+S+F+LWQ+AY+E F P +WP+F A+ + R+RRFG ++
Sbjct: 185 LLIRTSGECRISNFMLWQLAYAEMYFTPVFWPEFDENCLIEAVTWFVNRERRFGCTGEQ 243
>gi|283783958|ref|YP_003363823.1| undecaprenyl pyrophosphate synthetase [Citrobacter rodentium
ICC168]
gi|282947412|emb|CBG86957.1| undecaprenyl pyrophosphate synthetase [Citrobacter rodentium
ICC168]
Length = 252
Score = 291 bits (745), Expect = 7e-77, Method: Composition-based stats.
Identities = 90/239 (37%), Positives = 140/239 (58%), Gaps = 4/239 (1%)
Query: 6 MSSSPP----DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+S + P H+ IIMDGNGRWA +G R GH+ G + V+ AA GI LT++
Sbjct: 8 VSENLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIDALTLY 67
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+S L++L L SL ++N+++R+IG+ + + ++++E
Sbjct: 68 AFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSE 127
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T NTGL L IA NY R +I + ++ + + ++ G + +D ++ + + ++
Sbjct: 128 ALTARNTGLTLNIAANYGGRWDIVQGVRKLAEQVQEGVLRPDQIDEEMLNQQICMHELAP 187
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRTGGE R+S+FLLWQ+AY+E F WPDF + F AL+ + R+RRFGG
Sbjct: 188 VDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALHAFANRERRFGGTE 246
>gi|78779486|ref|YP_397598.1| undecaprenyl pyrophosphate synthetase [Prochlorococcus marinus str.
MIT 9312]
gi|78712985|gb|ABB50162.1| Undecaprenyl pyrophosphate synthetase [Prochlorococcus marinus str.
MIT 9312]
Length = 267
Score = 291 bits (744), Expect = 7e-77, Method: Composition-based stats.
Identities = 87/240 (36%), Positives = 133/240 (55%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P H+ IIMDGNGRWA +GLPR GH++G+ V +I+ AA +G K +T+
Sbjct: 14 LSIKIDKQKVPKHVAIIMDGNGRWATRKGLPRSFGHKQGVSVLKKILKAAKNLGCKVITV 73
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP E++ L+ L LK + + + K++ IG+ ++ ++ +
Sbjct: 74 YAFSTENWTRPTKEVNFLINLFSEVLKNEIKEIHEESTKIKFIGDLTPFPKNLKEIISSS 133
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E T+ N + NY R EI + K + SG + +++ L L T +
Sbjct: 134 ESLTKNNNKFLFNVCVNYGGRQEIVKVAKELALKSSSGEIKPSEINEELFNSELLTGGIK 193
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DP+L+IRT GEKR+S+FLLWQ+AYSE WP+F+ F A+ Y R+RRFGG+
Sbjct: 194 DPELLIRTSGEKRISNFLLWQLAYSEIYISDVLWPEFNEHEFLKAIIDYQSRNRRFGGIE 253
>gi|332885431|gb|EGK05680.1| di-trans,poly-cis-decaprenylcistransferase [Dysgonomonas mossii DSM
22836]
Length = 249
Score = 291 bits (744), Expect = 7e-77, Method: Composition-based stats.
Identities = 100/239 (41%), Positives = 149/239 (62%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P H+ IIMDGNGRWA ++ L R GH++GI + AAA+ I +T++ F
Sbjct: 6 QIDKTRIPKHVAIIMDGNGRWAKSQNLDRSFGHKEGIVAVRRTIEAAAKAEIAYITLYTF 65
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP E+ L+ L+ + L KNNI+V+VIG+ L D L +
Sbjct: 66 STENWKRPEEEVKALMALMIQAVANETPDLIKNNIRVKVIGDIDRLPADTQKALDYCLKE 125
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T + TG + +A +YSS+ E+++A+K I D+E+G + D++ SLI +YL T +PDPD
Sbjct: 126 TSVCTGTTVVLALSYSSKWELTKAMKTIATDVEAGKIKMEDIEESLIPQYLSTKGIPDPD 185
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+++RTGGE R+S+FLLWQ+AYSE F E WPDF+ E F A+ + R+RRFG S++
Sbjct: 186 ILVRTGGELRISNFLLWQIAYSELYFTDELWPDFNEESLFKAVVDFQNRERRFGKTSEQ 244
>gi|256845598|ref|ZP_05551056.1| di-trans,poly-cis-decaprenylcistransferase [Fusobacterium sp.
3_1_36A2]
gi|256719157|gb|EEU32712.1| di-trans,poly-cis-decaprenylcistransferase [Fusobacterium sp.
3_1_36A2]
Length = 230
Score = 291 bits (744), Expect = 7e-77, Method: Composition-based stats.
Identities = 98/235 (41%), Positives = 142/235 (60%), Gaps = 7/235 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M + P+HI IIMDGNGRWA RGL R GH +G + + + E+G+K LT++AFS
Sbjct: 1 MKKNIPNHIAIIMDGNGRWAKKRGLARSFGHMEGAKTLRKALEYLTEIGVKYLTVYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+S L+KL ++K ++ KN I+ V G + ++ + + +++ E++T+
Sbjct: 61 ENWNRPQDEVSTLMKLFLKYIKSERKNMMKNKIRFFVSGRKNNVPEKLQKEIEKLEEETK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N + L IAFNY SR EI A+ I +D + ++ +KYL +D PDPDL+
Sbjct: 121 NNDKITLNIAFNYGSRAEIVDAVNRIIKDGK------ENITEEDFSKYLY-NDFPDPDLV 173
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IRT GE R+S+FLLWQ+AYSE WPDF + A+ YN R+RRFGG+
Sbjct: 174 IRTSGEMRISNFLLWQIAYSELYITDTLWPDFDEKEIDKAIESYNQRERRFGGVK 228
>gi|294785113|ref|ZP_06750401.1| di-trans,poly-cis-decaprenylcistransferase [Fusobacterium sp.
3_1_27]
gi|294486827|gb|EFG34189.1| di-trans,poly-cis-decaprenylcistransferase [Fusobacterium sp.
3_1_27]
Length = 230
Score = 291 bits (744), Expect = 7e-77, Method: Composition-based stats.
Identities = 98/235 (41%), Positives = 141/235 (60%), Gaps = 7/235 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M + P+HI IIMDGNGRWA RGL R GH +G + + + E+G+K LT++AFS
Sbjct: 1 MKKNVPNHIAIIMDGNGRWAKKRGLARSFGHMEGAKTLRKALEYLTEIGVKYLTVYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+S L+KL ++K ++ KN I+ V G + ++ + + +++ E++T+
Sbjct: 61 ENWNRPQDEVSTLMKLFLKYIKSERKNMMKNKIRFFVSGRKNNVPEKLQKEIEKLEEETK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N + L IAFNY SR EI A+ I D + ++ +KYL +D PDPDL+
Sbjct: 121 NNDKITLNIAFNYGSRAEIVDAVNRIIDDGK------ENITEEDFSKYLY-NDFPDPDLV 173
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IRT GE R+S+FLLWQ+AYSE WPDF + A+ YN R+RRFGG+
Sbjct: 174 IRTSGEMRISNFLLWQIAYSELYITDTLWPDFDEKEIDKAIESYNQRERRFGGVK 228
>gi|302335683|ref|YP_003800890.1| Undecaprenyl pyrophosphate synthetase [Olsenella uli DSM 7084]
gi|301319523|gb|ADK68010.1| Undecaprenyl pyrophosphate synthetase [Olsenella uli DSM 7084]
Length = 261
Score = 291 bits (744), Expect = 7e-77, Method: Composition-based stats.
Identities = 95/238 (39%), Positives = 146/238 (61%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + P H+ IIMDGNGRWA ARGL R GH G++ E V + +G+ L+++
Sbjct: 21 LDDIDLGGIPRHVSIIMDGNGRWAKARGLDRSEGHVAGVDSLREAVTTSVRLGVDVLSVY 80
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E++ L+ L + L + + ++++R +G+ +L + V +
Sbjct: 81 AFSTENWKRPRREVNLLMHLFATTLMQELPLFFQEDVRLRFLGDLEALPRETRDVFQRGL 140
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
D+T +TG+ +A NY SR E+ RA I +++++GS+ D+D ++ L +S +PD
Sbjct: 141 DETAGHTGMTFALAVNYGSRAELVRATCQIAREVQAGSLAVEDIDEECVSSRLYSSGLPD 200
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDL+IRT GE RLS++LLWQ+AY+EF YWPDFSR + A+ Y RDRRFGG+
Sbjct: 201 PDLLIRTSGELRLSNYLLWQLAYTEFYVTDTYWPDFSRWDYLRAIRSYQRRDRRFGGV 258
>gi|86138422|ref|ZP_01056996.1| undecaprenyl diphosphate synthase [Roseobacter sp. MED193]
gi|85824947|gb|EAQ45148.1| undecaprenyl diphosphate synthase [Roseobacter sp. MED193]
Length = 252
Score = 291 bits (744), Expect = 7e-77, Method: Composition-based stats.
Identities = 111/233 (47%), Positives = 150/233 (64%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
SS P H+ IIMDGNGRWA ARG PR GH G E+V G+K LTIFAFS N
Sbjct: 19 SSGPRHVAIIMDGNGRWAQARGRPRLFGHHAGARRVREVVECCPRFGVKYLTIFAFSTEN 78
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W+R EIS L+ L + ++ K +L N++VR IG+RL LD ++ ++ E E +T+ N
Sbjct: 79 WKRTQVEISGLMSLFRRYISKEMKALAAQNVRVRFIGDRLRLDAKLVQLMDELEHETKGN 138
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
G++L IA NY RDE++RA K + QD+ SG + DV+ + +YLDT +PDPDL+IR
Sbjct: 139 DGIHLTIALNYGGRDEVARATKRLAQDVASGQLRPEDVNEETLPRYLDTHVLPDPDLVIR 198
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
T GE R+S+FLLWQ AY+E+ FI WPDF+ E ++ R+RRFG +S
Sbjct: 199 TSGEARISNFLLWQSAYAEYEFIDTLWPDFTAEELGRLCLKFGARERRFGAVS 251
>gi|332686703|ref|YP_004456477.1| undecaprenyl pyrophosphate synthetase [Melissococcus plutonius ATCC
35311]
gi|332370712|dbj|BAK21668.1| undecaprenyl pyrophosphate synthetase [Melissococcus plutonius ATCC
35311]
Length = 261
Score = 291 bits (744), Expect = 7e-77, Method: Composition-based stats.
Identities = 104/238 (43%), Positives = 145/238 (60%), Gaps = 4/238 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
P HI IIMDGNGRWA R LPR AGH++G+ +I A +GIK LT++AFS N
Sbjct: 24 GDIPKHIAIIMDGNGRWAQNRRLPRIAGHKEGMNTVKKITKHANHLGIKVLTLYAFSTEN 83
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W+RP E++ L++L F L K N++V V+G + L +++A +QT+ N
Sbjct: 84 WKRPTEEVNFLMQLPVDFFDTFVPELIKENVQVHVMGYKEFLPKHTQKAVEQAIEQTKNN 143
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPD 183
TG+ L A NY R EI A+K I + IE+ + ++D +LI+ L T +P DP+
Sbjct: 144 TGMILNFALNYGGRGEIVTAVKEIGEKIENKLLSIDEIDEALISDNLMTRFLPANLRDPE 203
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
L+IRT GE+R+S+FLLWQ+AYSE F WPDF+ +L A+ + R RRFGGL K
Sbjct: 204 LLIRTSGEERISNFLLWQIAYSELFFTDALWPDFNDKLLETAIASFQNRSRRFGGLKK 261
>gi|257792210|ref|YP_003182816.1| undecaprenyl diphosphate synthase [Eggerthella lenta DSM 2243]
gi|257476107|gb|ACV56427.1| undecaprenyl diphosphate synthase [Eggerthella lenta DSM 2243]
Length = 259
Score = 291 bits (744), Expect = 7e-77, Method: Composition-based stats.
Identities = 91/241 (37%), Positives = 139/241 (57%), Gaps = 3/241 (1%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ + ++ P H+ +IMDGNGRWA RG R GH+ GIE E + A++VG++ LTI++
Sbjct: 19 SQLDAAEVPQHVAVIMDGNGRWAKERGKNRLFGHKAGIEAVRETIRCASDVGVRYLTIYS 78
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW+RP E+ L+ L + + L + +++V IG L +A +
Sbjct: 79 FSSENWKRPQDEVIGLMNLFATTMLAEVDGLHEEHVRVMTIGRTDELPKKTRDAFAKAWE 138
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNI---FQDIESGSVCSHDVDSSLIAKYLDTSDV 179
+T+ N G+ L +A NY R E+ A+++ + + ++++L T+D+
Sbjct: 139 KTKDNDGMTLVVAVNYGGRVELLDAMRSYMDGAHAALREGREPEPLSEATLSRHLYTADI 198
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDPDL+IRT GE R+S+FLLWQ+AYSEFV WPDF R F AL ++ RDRRFG +
Sbjct: 199 PDPDLLIRTSGEMRVSNFLLWQIAYSEFVCTETLWPDFDRYEFLRALLEFQSRDRRFGAV 258
Query: 240 S 240
Sbjct: 259 K 259
>gi|257066101|ref|YP_003152357.1| undecaprenyl diphosphate synthase [Anaerococcus prevotii DSM 20548]
gi|256797981|gb|ACV28636.1| undecaprenyl diphosphate synthase [Anaerococcus prevotii DSM 20548]
Length = 232
Score = 291 bits (744), Expect = 8e-77, Method: Composition-based stats.
Identities = 97/236 (41%), Positives = 142/236 (60%), Gaps = 4/236 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M + + P H+ I++DGNGRWA + +PR GH+ G E +I A + G+K +T++AFS
Sbjct: 1 MDNLNIPTHVAIVLDGNGRWAKKKHMPRTYGHKNGAENVVDICLYAKKRGVKYMTLYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP+ E++ L+KL+ F++ L K N K+ IG+ L + A + T
Sbjct: 61 TENWKRPLEEVNYLMKLVIKFIESKLDILMKENCKLNFIGDLEKLPASTKEICIRAMEDT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ N + L IA NY RDEI A K + D + D+ +I+ YL T D PDPDL
Sbjct: 121 KDNDEITLNIALNYGGRDEIVHAFKAMMDD----GISKEDITEEMISSYLYTKDQPDPDL 176
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
+IR GGE RLS+FL++Q+AY+EF F WPDF R+ F AL +++ R+RR+G LS
Sbjct: 177 LIRPGGELRLSNFLIYQLAYAEFYFTDTLWPDFDRKAFDEALEEFSRRNRRYGALS 232
>gi|307708101|ref|ZP_07644569.1| undecaprenyl diphosphate synthase [Streptococcus mitis NCTC 12261]
gi|307615886|gb|EFN95091.1| undecaprenyl diphosphate synthase [Streptococcus mitis NCTC 12261]
Length = 252
Score = 291 bits (744), Expect = 8e-77, Method: Composition-based stats.
Identities = 105/238 (44%), Positives = 136/238 (57%), Gaps = 4/238 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ + P HIGIIMDGNGRWA R PR GH+ G+E + AA ++G+K +T++AFS
Sbjct: 15 VPTQVPAHIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQTVTKAANKLGVKVITVYAFST 74
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+ ++ L F L NN+K+++IG L L +AE+ T+
Sbjct: 75 ENWTRPDQEVKFIMNLPVEFYDNYVPELHANNVKIQMIGETERLPKQTFEALTKAEELTK 134
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----D 181
NTGL L A NY R EI++A+K I QD+ + D+ LI YL T +P D
Sbjct: 135 NNTGLILNFALNYGGRAEITQALKLISQDVLDAKINPGDITEELIGNYLFTQHLPKELRD 194
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDLIIRT GE RLS+FL WQ AYSE F WPDF A+ YN R RRFGG+
Sbjct: 195 PDLIIRTSGELRLSNFLPWQGAYSELYFTDTLWPDFDEAALQEAILAYNRRHRRFGGV 252
>gi|84389788|ref|ZP_00991340.1| undecaprenyl diphosphate synthase [Vibrio splendidus 12B01]
gi|84376889|gb|EAP93763.1| undecaprenyl diphosphate synthase [Vibrio splendidus 12B01]
Length = 250
Score = 291 bits (744), Expect = 8e-77, Method: Composition-based stats.
Identities = 99/236 (41%), Positives = 156/236 (66%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ S P HI IIMDGNGRWA A+G PR GH+ G+ + ++++A +GIK +T+FAFS
Sbjct: 8 TDSLPKHIAIIMDGNGRWAKAQGKPRVFGHKNGVRAVRKTISSSARLGIKAVTLFAFSSE 67
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+ L++L S L L KNN+++RVIG++ +D + ++EAE T
Sbjct: 68 NWRRPEEEVGILMELFISVLSSEVKKLHKNNLQLRVIGDKSRFNDRLQKKIEEAEALTST 127
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTG+ + IA NY + +I +A+ +I Q ++SG + D+D ++I ++L +D+P+ DL+I
Sbjct: 128 NTGMVINIAANYGGKWDIQQAMTSIAQQVKSGDINVDDIDEAMITQHLTMADIPEVDLLI 187
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE R+S+F+LWQ+AY+E F ++WPDF+ + A+ + R+RRFG ++
Sbjct: 188 RTSGECRISNFMLWQLAYAEMYFTEQFWPDFNEDSLVEAVTWFVNRERRFGCTGEQ 243
>gi|160880756|ref|YP_001559724.1| undecaprenyl diphosphate synthase [Clostridium phytofermentans
ISDg]
gi|160429422|gb|ABX42985.1| undecaprenyl diphosphate synthase [Clostridium phytofermentans
ISDg]
Length = 240
Score = 291 bits (744), Expect = 8e-77, Method: Composition-based stats.
Identities = 107/239 (44%), Positives = 154/239 (64%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + P+HI IIMDGNGRWA R +PR GH++G ++ I A ++GIK +T+
Sbjct: 1 MGTELEGLKIPNHIAIIMDGNGRWAKKRMMPRNYGHKQGSKIVENICREAYDIGIKYVTV 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP SEI L+KL++ FL + KKNN++V VIG+ L+ + + +
Sbjct: 61 YAFSTENWSRPQSEIDTLMKLLRDFLSECLSKSKKNNMRVHVIGDITRLEQSLQDTIVKL 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E+ + NTGL +A NY +DEI RA + I QD++ G + D+++ + YLDT +P
Sbjct: 121 EEVSASNTGLCFQVALNYGGQDEILRATRKIAQDVKDGKLSIEDLNTEVYEDYLDTKGIP 180
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDL+IRT GE+RLS+FLLWQ+AYSEF F WPDF+++ A+ YN R+RR+GG+
Sbjct: 181 APDLLIRTSGEQRLSNFLLWQLAYSEFYFTDVLWPDFNKKELIKAIEFYNGRERRYGGV 239
>gi|212695387|ref|ZP_03303515.1| hypothetical protein BACDOR_04936 [Bacteroides dorei DSM 17855]
gi|237711576|ref|ZP_04542057.1| undecaprenyl pyrophosphate synthetase [Bacteroides sp. 9_1_42FAA]
gi|212662022|gb|EEB22596.1| hypothetical protein BACDOR_04936 [Bacteroides dorei DSM 17855]
gi|229454271|gb|EEO59992.1| undecaprenyl pyrophosphate synthetase [Bacteroides sp. 9_1_42FAA]
Length = 243
Score = 291 bits (744), Expect = 8e-77, Method: Composition-based stats.
Identities = 104/240 (43%), Positives = 150/240 (62%), Gaps = 2/240 (0%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ S P H+ IIMDGNGRWA RG R GH+ G E + I AA +G+K LT++
Sbjct: 5 EQIDKSRIPAHVAIIMDGNGRWAKQRGQARSFGHQAGAETVHIIAEEAARLGVKYLTLYT 64
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RPV E++ L+ L+ +++ + KNNI R+IG+ L ++L L + +
Sbjct: 65 FSTENWNRPVDEVAALMSLLMDSIEEE--TFMKNNISFRIIGDTAKLPVEVLERLNQCIE 122
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T +NTG+ L +A +YSS+ EI+ A++ I I++ + D+D +LI +L T+ +PDP
Sbjct: 123 HTSINTGMCLTLALSYSSKWEITEAVRQITIKIQNNKLAIDDIDDNLINAHLSTNYMPDP 182
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL+IRTGGE RLS++LLWQ AYSE F +WPDF E F A+ Y R+RRFG S++
Sbjct: 183 DLLIRTGGEIRLSNYLLWQCAYSELYFCETFWPDFREEEFCKAIYDYQKRERRFGKTSEQ 242
>gi|307126478|ref|YP_003878509.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae 670-6B]
gi|306483540|gb|ADM90409.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus
pneumoniae 670-6B]
Length = 252
Score = 291 bits (744), Expect = 8e-77, Method: Composition-based stats.
Identities = 106/238 (44%), Positives = 137/238 (57%), Gaps = 4/238 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ + P HIGIIMDGNGRWA R PR GH+ G+E + AA ++G+K +T++AFS
Sbjct: 15 VPTQVPAHIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQTVTKAANKLGVKVITVYAFST 74
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RPV E+ ++ L F L NN+K+++IG L L +AE+ T+
Sbjct: 75 ENWTRPVQEVKFIMNLPVEFYDNYVPELHANNVKIQMIGETDRLPKQTFEALTKAEELTK 134
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----D 181
NTGL L A NY R EI++A+K I QD+ + D+ LI YL T +P D
Sbjct: 135 NNTGLILNFALNYGGRAEITQALKLISQDVLDAKINPGDITEELIGNYLFTQHLPKDLRD 194
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDLIIRT GE RLS+FL WQ AYSE F WPDF A+ YN R RRFGG+
Sbjct: 195 PDLIIRTSGELRLSNFLPWQGAYSELYFTDTLWPDFDEAALQEAILAYNRRHRRFGGV 252
>gi|317493183|ref|ZP_07951606.1| di-trans,poly-cis-decaprenylcistransferase [Enterobacteriaceae
bacterium 9_2_54FAA]
gi|316918843|gb|EFV40179.1| di-trans,poly-cis-decaprenylcistransferase [Enterobacteriaceae
bacterium 9_2_54FAA]
Length = 253
Score = 291 bits (744), Expect = 8e-77, Method: Composition-based stats.
Identities = 94/230 (40%), Positives = 136/230 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R GH+ G++ V A GIK LT++AFS NW R
Sbjct: 16 PQHVAIIMDGNGRWAKRQGKMRVFGHKAGVKSVRRSVRFAVSHGIKALTLYAFSSENWNR 75
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L L SL K+N+++++IG+ + ++ +E T N GL
Sbjct: 76 PEHEVSALMELFIRALDGEVKSLHKHNVRLKIIGDIGRFSSRLQERIRRSEQLTENNDGL 135
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I + +K + +++G + D+ L+++ + D+ DL+IRTGG
Sbjct: 136 TLNIAANYGGRWDIMQGVKTLAAQVKAGVLQPDDITEDLLSQQVCLHDLAPVDLVIRTGG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E R+S+FLLWQ+AYSEF F WPDF F ALN + R+RRFGG +
Sbjct: 196 EHRVSNFLLWQIAYSEFYFTDVLWPDFDELTFEGALNAFAQRERRFGGTT 245
>gi|304436533|ref|ZP_07396506.1| di-trans,poly-cis-decaprenylcistransferase [Selenomonas sp. oral
taxon 149 str. 67H29BP]
gi|304370476|gb|EFM24128.1| di-trans,poly-cis-decaprenylcistransferase [Selenomonas sp. oral
taxon 149 str. 67H29BP]
Length = 264
Score = 291 bits (744), Expect = 8e-77, Method: Composition-based stats.
Identities = 99/239 (41%), Positives = 146/239 (61%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ +S P H+ I+MDGNGRWA +G R AGH G IV AA+ +GI+ LT++AF
Sbjct: 25 ALDRASLPRHVAIVMDGNGRWAEGKGKSRSAGHEAGARTLKRIVRAASHIGIEVLTVYAF 84
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP E+ L+ L SFL+K + + N+++ IG R D L +++AE +
Sbjct: 85 STENWKRPHREVDFLLNLFDSFLEKEITEMHEQNVRMSFIGRRDRFSDRFLARMEDAEQR 144
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NTG++ +A NY S+DEI RA++ + + G + ++D +L + LDT+ P D
Sbjct: 145 TAHNTGVHFNLAANYGSQDEIVRAVRKLATRVAEGELRPEEIDEALFSNALDTAGDPPVD 204
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L IRT G+ RLS+FLLWQ AY+E F +WPDF+ E A+ + R RRFGGL+ +
Sbjct: 205 LFIRTSGDLRLSNFLLWQSAYAELYFTETHWPDFTPEELKRAIEDFAGRSRRFGGLTTE 263
>gi|78485625|ref|YP_391550.1| undecaprenyl diphosphate synthase [Thiomicrospira crunogena XCL-2]
gi|78363911|gb|ABB41876.1| Undecaprenyl pyrophosphate synthetase [Thiomicrospira crunogena
XCL-2]
Length = 244
Score = 291 bits (744), Expect = 8e-77, Method: Composition-based stats.
Identities = 106/242 (43%), Positives = 153/242 (63%), Gaps = 2/242 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + SS P HI IIMDGNGRWA R LPR GH+KG+ +V+ AE+G+ +LT+
Sbjct: 1 MNSKSTSSPIPKHIAIIMDGNGRWAKKRLLPRFVGHQKGLNAVKRVVSRCAELGVDSLTL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW+RP E+++L+ L L+K L +N +++R+IG+R + ++DI +++A
Sbjct: 61 FAFSTENWKRPEEEVNKLMGLFLKALQKEVTKLHENQVRLRIIGDRGAFNEDIQTHIEQA 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E T NTGL L IA NY R +I A+K + S ++ S I ++ SD P
Sbjct: 121 EQLTENNTGLTLNIAANYGGRWDIVDAVKK--WHQANPSKDVSELSESEICHHISLSDQP 178
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
PDL+IRTGGE+R+S+FL+WQ+AY+EF F E WPDF+ E A+ + R+RRFG S
Sbjct: 179 VPDLLIRTGGEQRISNFLIWQMAYAEFYFCDELWPDFNEESIDRAIGSFQQRERRFGKTS 238
Query: 241 KK 242
++
Sbjct: 239 EQ 240
>gi|309791082|ref|ZP_07685617.1| undecaprenyl diphosphate synthase [Oscillochloris trichoides DG6]
gi|308226866|gb|EFO80559.1| undecaprenyl diphosphate synthase [Oscillochloris trichoides DG6]
Length = 255
Score = 291 bits (744), Expect = 8e-77, Method: Composition-based stats.
Identities = 103/235 (43%), Positives = 143/235 (60%), Gaps = 4/235 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HI IIMDGNGRWA RG PR AGHR G E IV+ ++GI+ LTI+AFS NW
Sbjct: 25 RIPTHIAIIMDGNGRWAQQRGQPRMAGHRAGTENIRSIVSECDQIGIRYLTIYAFSTENW 84
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+ L++++ F+ + +L +++R +G L + ++ A D T+ NT
Sbjct: 85 NRPTLEVQGLMQILGDFIDRETKNLHAQQVRLRHLGRLNGLSPRLRRKVQHALDLTQHNT 144
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL L +AFNY R +I A + + S V DVD +I+ +L T +PDPD++IRT
Sbjct: 145 GLTLAVAFNYGGRADIVDATRELI----SAGVRPEDVDEQMISDHLYTRGMPDPDIVIRT 200
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
GE+R+S+FL+WQ AYSE+ F P WPDF E A+ Y R+RRFGGLS++
Sbjct: 201 SGERRISNFLIWQAAYSEYWFTPVLWPDFRAEHIHQAIRDYGRRERRFGGLSEQS 255
>gi|281421516|ref|ZP_06252515.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella copri DSM
18205]
gi|281404588|gb|EFB35268.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella copri DSM
18205]
Length = 250
Score = 291 bits (744), Expect = 8e-77, Method: Composition-based stats.
Identities = 95/246 (38%), Positives = 139/246 (56%), Gaps = 6/246 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M+ ++ + P+HI IIMDGNGRWA RG R GH+ G+E I + +G+K LT+
Sbjct: 1 MMDNLDMNRIPEHIAIIMDGNGRWATVRGKERSYGHQAGVETVRRITSECTRLGVKYLTL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW RP E++ L+ L+ + L+ KNN++ RVIG+ L + L+E
Sbjct: 61 YTFSTENWNRPADEVAALMGLVLTSLEDEI--FMKNNVRFRVIGDLKRLPQQVQDKLQET 118
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLDT 176
D T N + + +A +YSSR EI A K + ++ + K+L+T
Sbjct: 119 MDHTAKNDSMTMVVALSYSSRWEILNATKKMVKEALESGSTYEQIEDKLTEENFEKHLET 178
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
S +PDP+L+IRTGGE R+S++LLWQ+AYSE F +WPDF+ E A+ Y R RRF
Sbjct: 179 SFMPDPELLIRTGGELRISNYLLWQIAYSELYFCDTFWPDFNEEDLHKAIASYQNRQRRF 238
Query: 237 GGLSKK 242
G +
Sbjct: 239 GKTEAQ 244
>gi|294791803|ref|ZP_06756951.1| di-trans,poly-cis-decaprenylcistransferase [Veillonella sp. 6_1_27]
gi|294457033|gb|EFG25395.1| di-trans,poly-cis-decaprenylcistransferase [Veillonella sp. 6_1_27]
Length = 254
Score = 291 bits (744), Expect = 8e-77, Method: Composition-based stats.
Identities = 102/238 (42%), Positives = 150/238 (63%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P H+ IIMDGNGRWA RG+PR GHR G +V EIV AA E+GI+ LT++ FS
Sbjct: 16 IDRNIIPQHVAIIMDGNGRWAKRRGMPRSMGHRAGADVLKEIVMAADEIGIRALTVYGFS 75
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+S L+ LIK +L + ++N+++R IG L +D+ ++++AE T
Sbjct: 76 TENWKRPEQEVSLLMSLIKEYLNNNVKYMHEHNVRIRFIGFIGGLSEDLQKIIQDAELLT 135
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NTGL L +A NY RDEI R I++I + + G + + ++ L T + D DL
Sbjct: 136 QNNTGLTLQLAINYGGRDEIVRTIRDIVKSVADGVITMDKITEEYVSSQLFTKEFSDVDL 195
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IR + R+S+FLLWQ+AY+EF F +WPDF++E A+ Y R+RRFGGL +
Sbjct: 196 LIRPSSDFRISNFLLWQLAYAEFWFTDLHWPDFTKETLLEAVAAYQKRERRFGGLCDE 253
>gi|19704661|ref|NP_604223.1| undecaprenyl pyrophosphate synthetase [Fusobacterium nucleatum
subsp. nucleatum ATCC 25586]
gi|42559837|sp|Q8RE08|UPPS_FUSNN RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|19714967|gb|AAL95522.1| Undecaprenyl pyrophosphate synthetase [Fusobacterium nucleatum
subsp. nucleatum ATCC 25586]
Length = 230
Score = 291 bits (744), Expect = 9e-77, Method: Composition-based stats.
Identities = 98/235 (41%), Positives = 141/235 (60%), Gaps = 7/235 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M + P HI IIMDGNGRWA RGL R GH +G + + + E+G+K LT++AFS
Sbjct: 1 MEKNIPKHIAIIMDGNGRWAKKRGLARSFGHMEGAKTLRKALEYLTEIGVKYLTVYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+S L+KL ++K ++ KN I+ V G + ++ + + +++ E++T+
Sbjct: 61 ENWNRPQDEVSTLMKLFLKYIKNERKNMMKNKIRFFVSGRKNNVPEKLQKEIEKLEEETK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N + L IAFNY SR EI A+ I +D + ++ +KYL +D PDPDL+
Sbjct: 121 NNDKITLNIAFNYGSRAEIVDAVNRIIKDGK------ENITEEDFSKYLY-NDFPDPDLV 173
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IRT GE R+S+FLLWQ+AYSE WPDF + A+ YN R+RRFGG+
Sbjct: 174 IRTSGEMRISNFLLWQIAYSELYITDVLWPDFDEKEIDKAIESYNQRERRFGGVK 228
>gi|257065046|ref|YP_003144718.1| Undecaprenyl pyrophosphate synthetase [Slackia heliotrinireducens
DSM 20476]
gi|256792699|gb|ACV23369.1| Undecaprenyl pyrophosphate synthetase [Slackia heliotrinireducens
DSM 20476]
Length = 259
Score = 291 bits (744), Expect = 9e-77, Method: Composition-based stats.
Identities = 97/240 (40%), Positives = 140/240 (58%), Gaps = 3/240 (1%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+++ P H+ +IMDGNGRWA R L R GH+ G+E E++ AA +VG++ LTI++F
Sbjct: 20 ALIEERVPKHVAVIMDGNGRWAKKRLLNRLNGHKAGVEAVRELIRAANDVGVECLTIYSF 79
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP E++ L+ L + L + ++ V +G+ +L D +A ++
Sbjct: 80 STENWKRPEEEVTGLMDLFAKTMLAEVDGLHEEHVVVCPMGDLSALPQDTQDAFMKAWEK 139
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIK---NIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
T+ N G+ LF+A NY SR EI A+ + + V L++K+L S +P
Sbjct: 140 TKDNDGMKLFVAVNYGSRKEICDAVNEIVMEAIEQHEETYTVPLVTEELLSKHLYVSGIP 199
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GE RLS+FLLWQ+AYSEF WPDF R F AL Y R+RRFG +S
Sbjct: 200 DPDLLIRTSGEMRLSNFLLWQIAYSEFYCTDTLWPDFDRYEFLRALLDYQSRNRRFGAVS 259
>gi|154500381|ref|ZP_02038419.1| hypothetical protein BACCAP_04048 [Bacteroides capillosus ATCC
29799]
gi|150270886|gb|EDM98169.1| hypothetical protein BACCAP_04048 [Bacteroides capillosus ATCC
29799]
Length = 251
Score = 290 bits (743), Expect = 9e-77, Method: Composition-based stats.
Identities = 92/230 (40%), Positives = 138/230 (60%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IIMDGNGRWA RGLPR AGH G E F I E+G++ LT++AFS NW+
Sbjct: 19 LPRHVAIIMDGNGRWAKKRGLPRTAGHAAGAENFRTIATYCKEIGLEYLTVYAFSTENWK 78
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+S ++ L+K +L + ++++ +K+ G+ L ++ + ++ + ++ G
Sbjct: 79 RPAEEVSAIMGLLKKYLIEAIGKMERDRVKMCFFGDLSPLPQELRDLCEQTREISKHYEG 138
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ + I NY RDE+ RA K D +G + + + YL ++ VPDPDL+IR
Sbjct: 139 VQVNICLNYGGRDELVRAAKAFALDCAAGKADPNHLTEAQFGNYLFSAGVPDPDLVIRPS 198
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE+R+S+FLLWQ AY+E+ F WPDF+R+ AL Y R RRFGG+
Sbjct: 199 GEERISNFLLWQSAYAEYYFTDVLWPDFNRDELHRALAAYQHRQRRFGGV 248
>gi|149017954|ref|ZP_01834413.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
SP23-BS72]
gi|194397226|ref|YP_002036961.1| undecaprenyl pyrophosphate synthase [Streptococcus pneumoniae G54]
gi|147931518|gb|EDK82496.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
SP23-BS72]
gi|194356893|gb|ACF55341.1| undecaprenyl pyrophosphate synthetase [Streptococcus pneumoniae
G54]
Length = 252
Score = 290 bits (743), Expect = 9e-77, Method: Composition-based stats.
Identities = 105/238 (44%), Positives = 136/238 (57%), Gaps = 4/238 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ + P HIGIIMDGNGRWA R PR GH+ G+E + AA ++G+K +T++AFS
Sbjct: 15 VPTQVPAHIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQTVTKAANKLGVKVITVYAFST 74
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+ ++ L F L NN+K+++IG L L +AE+ T+
Sbjct: 75 ENWTRPDQEVKFIMNLPVEFYDNYVPELHANNVKIQMIGETDRLPKQTFEALIKAEELTK 134
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----D 181
NTGL L A NY R EI++A+K I QD+ + D+ LI YL T +P D
Sbjct: 135 NNTGLILNFALNYGGRAEITQALKLISQDVLDAKINPGDITEELIGNYLFTQHLPKDLRD 194
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDLIIRT GE RLS+FL WQ AYSE F WPDF A+ YN R RRFGG+
Sbjct: 195 PDLIIRTSGELRLSNFLPWQGAYSELYFTDTLWPDFDEAALQEAILAYNRRHRRFGGV 252
>gi|117925141|ref|YP_865758.1| undecaprenyl pyrophosphate synthetase [Magnetococcus sp. MC-1]
gi|117608897|gb|ABK44352.1| Undecaprenyl pyrophosphate synthetase [Magnetococcus sp. MC-1]
Length = 243
Score = 290 bits (743), Expect = 9e-77, Method: Composition-based stats.
Identities = 96/233 (41%), Positives = 145/233 (62%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ P H+ I+MDGN RWA R LPR GHR+G++ + A+ + GI+ LT++ FS
Sbjct: 9 LPEKLPRHVAIVMDGNRRWARKRYLPRLEGHRQGVKSVRRSIEASLDFGIETLTLYTFSA 68
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP E+S L+ L+ LK+ L + ++ R +G L ++ +++ E++T
Sbjct: 69 ENWKRPKDEVSALMNLLALHLKREMDDLHERGVRFRALGRLDELPTNVREYVQQLEEKTA 128
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
NT LN IA NY R EI A K + + + G + D+ +A +L T D PDPDL+
Sbjct: 129 GNTRLNFNIALNYGGRQEIVDAAKAMSKQVLEGHLKWDDIGPEHLACHLTTHDQPDPDLM 188
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
IRTGG+ R+S+FLLWQ+AY+E +F+P YWP+F+R+ F AL++Y R+RRFG
Sbjct: 189 IRTGGDHRISNFLLWQMAYTELIFLPIYWPEFNRDHFLQALHEYAERERRFGA 241
>gi|253988130|ref|YP_003039486.1| undecaprenyl pyrophosphate synthetase [Photorhabdus asymbiotica
subsp. asymbiotica ATCC 43949]
gi|253779580|emb|CAQ82741.1| undecaprenyl pyrophosphate synthetase [Photorhabdus asymbiotica]
Length = 253
Score = 290 bits (743), Expect = 9e-77, Method: Composition-based stats.
Identities = 101/234 (43%), Positives = 143/234 (61%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+SS P H+ IIMDGNGRWA RG R GHR GI+ V+ +A+ I++LT++AFS
Sbjct: 11 LSSLLPKHVAIIMDGNGRWAKKRGKLRVFGHRAGIKAVRSAVSFSAKHKIESLTLYAFSS 70
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+S L++L L SL K+NIK+ +IG+ + + ++ + T
Sbjct: 71 ENWNRPEQEVSSLMELFIFALDNEIKSLHKHNIKLSIIGDISRFSERLQERIRRSVKLTA 130
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
NTGL L IA NY R +I ++++ I Q I+ S+ D+ L+ Y++ S P DL+
Sbjct: 131 NNTGLQLNIAANYGGRWDIVQSVQKIAQQIKDNSLEPQDITEELVNNYINLSQQPQVDLV 190
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRTGGE R+S+FLLWQ+AY+EF F WPDF +F A+N + R+RRFGG
Sbjct: 191 IRTGGEHRISNFLLWQIAYAEFYFTDILWPDFDETVFEGAINAFAKRERRFGGT 244
>gi|298370304|ref|ZP_06981620.1| undecaprenyl pyrophosphate synthetase [Neisseria sp. oral taxon 014
str. F0314]
gi|298281764|gb|EFI23253.1| undecaprenyl pyrophosphate synthetase [Neisseria sp. oral taxon 014
str. F0314]
Length = 248
Score = 290 bits (743), Expect = 9e-77, Method: Composition-based stats.
Identities = 101/238 (42%), Positives = 144/238 (60%), Gaps = 6/238 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI +IMDGNGRWA R LPR GH++G++ E+V A+ G++ LT+FAFS
Sbjct: 9 LAHTQIPRHIAVIMDGNGRWAKKRFLPRVMGHKRGLDALEEMVKNCAQAGVEYLTVFAFS 68
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRRP E+S L+ L L+K L +NN++++VIG+R +IL ++ AE T
Sbjct: 69 TENWRRPEDEVSFLMGLFLQALQKQVQRLHENNMRLKVIGSRERFSTEILQGIEAAEVLT 128
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NTGL L IA +Y R +I +A + S ++ + +YL D P+PDL
Sbjct: 129 AGNTGLTLCIAADYGGRWDILQAANRAVAEG------SGEITEDSLGRYLMLGDAPEPDL 182
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTGGE R+S+FLLWQ+AY+E F WPDF ++ F A+ Y R+RRFG S++
Sbjct: 183 FIRTGGETRISNFLLWQMAYAELYFTDTLWPDFDKKSFDDAVASYQKRERRFGRTSEQ 240
>gi|282850151|ref|ZP_06259530.1| di-trans,poly-cis-decaprenylcistransferase [Veillonella parvula
ATCC 17745]
gi|282579644|gb|EFB85048.1| di-trans,poly-cis-decaprenylcistransferase [Veillonella parvula
ATCC 17745]
Length = 254
Score = 290 bits (743), Expect = 9e-77, Method: Composition-based stats.
Identities = 102/238 (42%), Positives = 150/238 (63%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P H+ IIMDGNGRWA RG+PR GHR G +V EIV AA E+GI+ LT++ FS
Sbjct: 16 IDRNIIPQHVAIIMDGNGRWAKRRGMPRSMGHRAGADVLKEIVMAADEIGIRALTVYGFS 75
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+S L+ LIK +L + ++N+++R IG L +D+ ++++AE T
Sbjct: 76 TENWKRPEQEVSLLMSLIKEYLNNNVKFMHEHNVRIRFIGFIGGLSEDLQKIIQDAELLT 135
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NTGL L +A NY RDEI R I++I + + G + + ++ L T + D DL
Sbjct: 136 QNNTGLTLQLAINYGGRDEIVRTIRDIVKSVADGVITMDKITEEYVSSQLFTKEFSDVDL 195
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IR + R+S+FLLWQ+AY+EF F +WPDF++E A+ Y R+RRFGGL +
Sbjct: 196 LIRPSSDFRISNFLLWQLAYAEFWFTDLHWPDFTKETLLEAVAAYQKRERRFGGLCDE 253
>gi|326204056|ref|ZP_08193917.1| undecaprenyl diphosphate synthase [Clostridium papyrosolvens DSM
2782]
gi|325985823|gb|EGD46658.1| undecaprenyl diphosphate synthase [Clostridium papyrosolvens DSM
2782]
Length = 251
Score = 290 bits (743), Expect = 9e-77, Method: Composition-based stats.
Identities = 99/231 (42%), Positives = 148/231 (64%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI II DGNGRWA R LPR GH++G ++V ++VG+K+LT++AFS NW+
Sbjct: 20 IPQHIAIIPDGNGRWAKKRSLPRNVGHKEGSMTLKKVVIYCSKVGVKHLTVYAFSTENWK 79
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP SE+ L+ L+ FL+ L +N+++RVIG+ L +++ + E T +N G
Sbjct: 80 RPQSEVDALMGLLLEFLRNAERELAGSNVRIRVIGDINGLPEELQNEIARVEKMTSINNG 139
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
LNL IA NY SR EI A+K I ++I+ G + D+D + + ++L T +P+PDL+IRT
Sbjct: 140 LNLNIALNYGSRFEILYAVKKIAKEIKDGKLSIDDIDENQMEQHLYTKGIPEPDLLIRTS 199
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
GE+R+S++LLWQ AY+EF F WPDF+ A+ + R+RR+GG+
Sbjct: 200 GEQRISNYLLWQCAYTEFWFTDTLWPDFNESHIAEAIKAFEKRNRRYGGIE 250
>gi|220934337|ref|YP_002513236.1| undecaprenyl diphosphate synthase [Thioalkalivibrio sp. HL-EbGR7]
gi|219995647|gb|ACL72249.1| undecaprenyl diphosphate synthase [Thioalkalivibrio sp. HL-EbGR7]
Length = 261
Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats.
Identities = 102/240 (42%), Positives = 145/240 (60%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A S+ P H+ IIMDGNGRWA AR LPR GHR+G+ V A G++ LT+FA
Sbjct: 16 APADSAVIPRHVAIIMDGNGRWARARHLPRTEGHRQGVHATRTAVRFCAARGVQALTLFA 75
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW+RP +E++ L+ L S L+K L +NNI++R IG R + D + + EAE
Sbjct: 76 FSSENWKRPSAEVNTLMSLFVSALEKELPELVQNNIRLRFIGEREAFSDKLKHRIHEAEA 135
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
TR NTG+ L IA +Y R +I+ A++ + ++ G + + + + L T+ +PDP
Sbjct: 136 ATRDNTGMELVIAVSYGGRWDITAAVRCLAVEVAEGRLDPASISVETLDRQLSTAGLPDP 195
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL IRTGGE+RLS+FLLWQ+AY+E F WPDF + A + R+RRFG ++
Sbjct: 196 DLFIRTGGERRLSNFLLWQLAYTELYFCDVLWPDFDEDALQAAFEFFAGRERRFGRTGEQ 255
>gi|288937044|ref|YP_003441103.1| undecaprenyl diphosphate synthase [Klebsiella variicola At-22]
gi|288891753|gb|ADC60071.1| undecaprenyl diphosphate synthase [Klebsiella variicola At-22]
Length = 252
Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats.
Identities = 89/232 (38%), Positives = 142/232 (61%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++AFS NW RP
Sbjct: 18 RHVAIIMDGNGRWAKRQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRP 77
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E+S L++L L SL ++N+++RVIG+ + + +++AE T NTGL
Sbjct: 78 AQEVSALMELFVWALDSEVKSLHRHNVRLRVIGDTTRFNARLQERIRKAEALTANNTGLT 137
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L IA NY R +I++ ++ + + ++ G++ ++ ++++ + ++ DL+IRTGGE
Sbjct: 138 LNIAANYGGRWDITQGVRLLAKQVQDGTLLPEEITEEMLSQQVCMHELAPVDLVIRTGGE 197
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
R+S+FL+WQ+AY+E F WPDF+ + F AL+ + R+RRFGG G
Sbjct: 198 HRISNFLIWQIAYAELYFTDVLWPDFAEQDFEGALHAFVNRERRFGGTEPGG 249
>gi|332532242|ref|ZP_08408123.1| undecaprenyl pyrophosphate synthetase [Pseudoalteromonas
haloplanktis ANT/505]
gi|332038340|gb|EGI74785.1| undecaprenyl pyrophosphate synthetase [Pseudoalteromonas
haloplanktis ANT/505]
Length = 259
Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats.
Identities = 95/239 (39%), Positives = 144/239 (60%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ P H+ IIMDGNGRWA AR PR GH+KG++ + V ++GI++LT+FAF
Sbjct: 13 TISQQCLPKHVAIIMDGNGRWAQARNRPRVYGHKKGVDAVRQSVQFCTKLGIQSLTLFAF 72
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRRP E++ L++L L K L KNN+K+ +IG+ + + + A
Sbjct: 73 SSENWRRPEDEVNTLMELFLFVLTKEVKKLHKNNVKLTIIGDLSRFSEGLRSKVDAAHKL 132
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NTGL L +A NY R +++ A K + + G++ + D+ +A+++ +D +PD
Sbjct: 133 TENNTGLRLNVAANYGGRWDMANAAKQLALQVAQGTLNAVDITEERLAQHMSMADQAEPD 192
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRTGG+ R+S+FLLWQVAY+E F WPDF+ F A+ Y R+RRFG ++
Sbjct: 193 LLIRTGGDVRISNFLLWQVAYAELYFTETLWPDFNEAAFAEAIACYVARERRFGCTGEQ 251
>gi|269468842|gb|EEZ80443.1| undecaprenyl pyrophosphate synthase [uncultured SUP05 cluster
bacterium]
Length = 237
Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats.
Identities = 97/235 (41%), Positives = 134/235 (57%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P HI IIMDGNGRWA R LPR GH+KG++ IV ++G+K LT+FAFS N
Sbjct: 2 NTPKHIAIIMDGNGRWAKKRFLPRIKGHQKGVQAVRNIVKHCGKLGVKTLTLFAFSSENK 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
R E+S L KL S LK+ L K+N+++++IG ++ EA+ NT
Sbjct: 62 NRSNEEVSLLFKLFLSVLKQEVKKLNKHNVRLKIIGELSLFPKEVQKTAIEAQALLSKNT 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL L IA NY + +I++A + I G + + D++ +KYL +D DL+IRT
Sbjct: 122 GLTLIIAANYGGQWDIAQAAQKIASLSAEGKINAEDINVDTFSKYLSLADEHRVDLLIRT 181
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
GE R+S+FLLW +AYSE F WPDF+ A+N + RDRRFG K
Sbjct: 182 SGELRISNFLLWDIAYSELYFTDTLWPDFNSIELDKAINSFTDRDRRFGARKDKA 236
>gi|114798355|ref|YP_760476.1| undecaprenyl diphosphate synthase [Hyphomonas neptunium ATCC 15444]
gi|114738529|gb|ABI76654.1| undecaprenyl diphosphate synthase [Hyphomonas neptunium ATCC 15444]
Length = 252
Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats.
Identities = 117/234 (50%), Positives = 158/234 (67%), Gaps = 1/234 (0%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IIMDGNGRWA AR LPR AGH +G+E V AA ++GI+ LT+F+FS NWR
Sbjct: 19 VPKHVAIIMDGNGRWATARHLPRTAGHERGVEALRRTVDAAGDLGIRYLTVFSFSTENWR 78
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP +E++ L L+K+++++ LK +++R+IG R L DI ++ +AE++TR NT
Sbjct: 79 RPAAEVNTLFGLLKAYVQRDLSRLKDEGVRIRIIGQRAGLPADIASLVSKAEEETRTNTE 138
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
NL IAFNY SRDEI RA + +D++SG D+ + A YLDT D+PDPDL+IRT
Sbjct: 139 FNLTIAFNYGSRDEILRAASALARDVKSGLRDP-DITENEFAGYLDTGDLPDPDLLIRTS 197
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
GE R+S+FLLWQ AY+EF+F WPDF R AL YN R+RR+G +S G
Sbjct: 198 GEFRISNFLLWQAAYAEFLFCDVLWPDFGRSHLEDALKCYNERERRYGAVSPGG 251
>gi|237744133|ref|ZP_04574614.1| undecaprenyl pyrophosphate synthetase [Fusobacterium sp. 7_1]
gi|229431362|gb|EEO41574.1| undecaprenyl pyrophosphate synthetase [Fusobacterium sp. 7_1]
Length = 230
Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats.
Identities = 99/235 (42%), Positives = 143/235 (60%), Gaps = 7/235 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M + P+HI IIMDGNGRWA RGL R GH +G + + + E+G+K LT++AFS
Sbjct: 1 MEKNIPNHIAIIMDGNGRWAKKRGLARSFGHMEGAKTLRKALEYLTEIGVKYLTVYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+S L+KL ++K ++ KN I+ V G + ++ + + +++ E++T+
Sbjct: 61 ENWNRPQDEVSTLMKLFLKYIKSERKNMMKNRIRFFVSGRKDNVPEKLQKEIEKLEEETK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N + L IAFNY SR EI A+ I +D + ++ +KYL +D PDPDL+
Sbjct: 121 NNDKITLNIAFNYGSRAEIVDAVNRIIKDGK------ENITEEDFSKYLY-NDFPDPDLV 173
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IRT GE R+S+FLLWQ+AYSEF WPDF + A+ YN R+RRFGG+
Sbjct: 174 IRTSGEMRISNFLLWQIAYSEFYITDTLWPDFDEKEIDKAIESYNQRERRFGGVK 228
>gi|15902284|ref|NP_357834.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae R6]
gi|15457788|gb|AAK99044.1| Undecaprenyl diphosphate synthase [Streptococcus pneumoniae R6]
Length = 258
Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats.
Identities = 105/238 (44%), Positives = 136/238 (57%), Gaps = 4/238 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ + P HIGIIMDGNGRWA R PR GH+ G+E + AA ++G+K +T++AFS
Sbjct: 21 VPTQVPAHIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQTVTKAANKLGVKVITVYAFST 80
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+ ++ L F L NN+K+++IG L L +AE+ T+
Sbjct: 81 ENWTRPDQEVKFIMNLPVEFYDNYVPELHANNVKIQMIGETDRLPKQTFEALTKAEELTK 140
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----D 181
NTGL L A NY R EI++A+K I QD+ + D+ LI YL T +P D
Sbjct: 141 NNTGLILNFALNYGGRAEITQALKLISQDVLDAKINPGDITEELIGNYLFTQHLPKDLRD 200
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDLIIRT GE RLS+FL WQ AYSE F WPDF A+ YN R RRFGG+
Sbjct: 201 PDLIIRTSGELRLSNFLPWQGAYSELYFTDTLWPDFDEAALQEAILAYNRRHRRFGGV 258
>gi|331267092|ref|YP_004326722.1| undecaprenyl diphosphate synthase [Streptococcus oralis Uo5]
gi|326683764|emb|CBZ01382.1| undecaprenyl diphosphate synthase [Streptococcus oralis Uo5]
Length = 252
Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats.
Identities = 106/234 (45%), Positives = 138/234 (58%), Gaps = 4/234 (1%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P+HIGIIMDGNGRWA R PR GH+ G+E ++ AA ++G+K +T++AFS NW
Sbjct: 19 VPNHIGIIMDGNGRWAKRRMQPRVFGHKAGMEALQKVTKAANKLGVKVITVYAFSTENWT 78
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ ++ L F L NN+K+++IG L L +AE+ T+ NTG
Sbjct: 79 RPDQEVKFIMNLPVEFYDNYVPELHANNVKIQMIGETDRLPKPTFEALTKAEELTKNNTG 138
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLI 185
L L A NY R EI++A+K I QD+ + D+ LI YL T +P DPDLI
Sbjct: 139 LILNFALNYGGRAEITQAVKLISQDVLDAKINPGDITEELIGNYLFTQHLPKDVRDPDLI 198
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRT GE RLS+FL WQ AYSE F+ WPDF E A+ YN R RRFGG+
Sbjct: 199 IRTSGELRLSNFLPWQGAYSELYFMDTLWPDFDEEALQEAILAYNRRHRRFGGV 252
>gi|163801783|ref|ZP_02195680.1| undecaprenyl diphosphate synthase [Vibrio sp. AND4]
gi|159174291|gb|EDP59095.1| undecaprenyl diphosphate synthase [Vibrio sp. AND4]
Length = 251
Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats.
Identities = 101/236 (42%), Positives = 149/236 (63%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S S P HI IIMDGNGRWA ++G PR GH+KG+ + VA A+++GIK +T+FAFS
Sbjct: 8 SDSLPKHIAIIMDGNGRWAKSKGKPRVFGHKKGVNAVRKTVATASKLGIKAMTLFAFSSE 67
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+ L++L S L L KNN+++RVIG+ + + + EAE T
Sbjct: 68 NWRRPEEEVGLLMELFISVLSSEVKKLHKNNLRLRVIGDISRFSERLQGKIAEAEALTLN 127
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTG+ + IA NY + +I+ A K + +G + D++ LI ++L +D+P+ DL+I
Sbjct: 128 NTGMVINIAANYGGKWDITEATKTLALKARNGEIRVEDINEQLITRHLTMADLPEVDLLI 187
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE R+S+F+LWQ+AY+E F PEYWP+F + A+ + R+RRFG ++
Sbjct: 188 RTSGECRISNFMLWQMAYAEMYFTPEYWPEFDEDSLIEAVTWFIDRERRFGCTGEQ 243
>gi|269797922|ref|YP_003311822.1| undecaprenyl diphosphate synthase [Veillonella parvula DSM 2008]
gi|294793664|ref|ZP_06758801.1| di-trans,poly-cis-decaprenylcistransferase [Veillonella sp. 3_1_44]
gi|269094551|gb|ACZ24542.1| undecaprenyl diphosphate synthase [Veillonella parvula DSM 2008]
gi|294455234|gb|EFG23606.1| di-trans,poly-cis-decaprenylcistransferase [Veillonella sp. 3_1_44]
Length = 254
Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats.
Identities = 101/238 (42%), Positives = 150/238 (63%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P H+ IIMDGNGRWA RG+PR GHR G +V EIV AA E+GI+ LT++ FS
Sbjct: 16 IDRNIIPQHVAIIMDGNGRWAKRRGMPRSMGHRAGADVLKEIVMAADEIGIRALTVYGFS 75
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+S L+ LIK +L + ++N+++R IG L +++ ++++AE T
Sbjct: 76 TENWKRPEQEVSLLMSLIKEYLNNNVKYMHEHNVRIRFIGFIGGLSENLQKIIQDAELLT 135
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NTGL L +A NY RDEI R I++I + + G + + ++ L T + D DL
Sbjct: 136 QNNTGLTLQLAINYGGRDEIVRTIRDIVKSVADGVITMDKITEEYVSSQLFTKEFSDVDL 195
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IR + R+S+FLLWQ+AY+EF F +WPDF++E A+ Y R+RRFGGL +
Sbjct: 196 LIRPSSDFRISNFLLWQLAYAEFWFTDLHWPDFTKETLLEAVAAYQKRERRFGGLCDE 253
>gi|288928939|ref|ZP_06422785.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella sp. oral
taxon 317 str. F0108]
gi|288329923|gb|EFC68508.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella sp. oral
taxon 317 str. F0108]
Length = 245
Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats.
Identities = 95/242 (39%), Positives = 146/242 (60%), Gaps = 2/242 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + P HI IIMDGNGRWA RG R GH+ G++ I + +G+K LT+
Sbjct: 1 MEQELDIKRIPRHIAIIMDGNGRWAKERGKERSYGHQAGVDTVRRITSECVRLGVKFLTL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW RP +EI+ L+ L+ S L+ KNN++ +V+G+ L + L+E
Sbjct: 61 YTFSTENWSRPETEIAALMGLVLSSLEDEI--FMKNNVRFQVVGDIQRLPQSVQDKLQET 118
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ T NT + + +A +YSSR E++RA ++I +D+++G++ D+ L+ + L+T+ +P
Sbjct: 119 MEHTAQNTAMTMVVALSYSSRWELTRAAQSIARDVKAGTLQPEDITEELMNERLETAFMP 178
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DP+L+IRTGGE R+S+++LWQ+AYSE F YWPDF A+ Y R RRFG
Sbjct: 179 DPELLIRTGGELRISNYMLWQIAYSELYFCDTYWPDFDEADLHQAIANYQARQRRFGKTG 238
Query: 241 KK 242
+
Sbjct: 239 MQ 240
>gi|225077040|ref|ZP_03720239.1| hypothetical protein NEIFLAOT_02092 [Neisseria flavescens
NRL30031/H210]
gi|224951597|gb|EEG32806.1| hypothetical protein NEIFLAOT_02092 [Neisseria flavescens
NRL30031/H210]
Length = 248
Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats.
Identities = 100/238 (42%), Positives = 146/238 (61%), Gaps = 6/238 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ S+ P HI +IMDGNGRWA R LPR GH++G++ +V AE+G++ LT+FAFS
Sbjct: 9 LEHSAIPRHIAVIMDGNGRWAKKRFLPRVMGHKRGLDALENMVKHCAELGVRYLTVFAFS 68
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRRP E+S L+ L L+K L NN+++RVIG+R + +IL ++ AE T
Sbjct: 69 TENWRRPEEEVSFLMGLFLQALQKQVRRLHDNNMRLRVIGSRERFNAEILKGIEAAEALT 128
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NTGL L IA +Y R +I +A + + + ++ +++YL D P+PDL
Sbjct: 129 ANNTGLTLSIAADYGGRWDILQAANQLIAEGVT------EITEEALSRYLMLGDAPEPDL 182
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTGGE R+S+FLLWQ+AY+E F WPDF+ + A+ + R+RRFG S++
Sbjct: 183 FIRTGGETRISNFLLWQMAYAELYFTDTLWPDFNEKSLNEAIASFQKRERRFGRTSEQ 240
>gi|170727616|ref|YP_001761642.1| undecaprenyl diphosphate synthase [Shewanella woodyi ATCC 51908]
gi|169812963|gb|ACA87547.1| undecaprenyl diphosphate synthase [Shewanella woodyi ATCC 51908]
Length = 264
Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats.
Identities = 94/236 (39%), Positives = 147/236 (62%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+A ++ S P H+ IIMDGNGRWA A+G PR GH+ G++ V+ A E+GI +LT+F
Sbjct: 16 LAELVKLSIPKHVAIIMDGNGRWAQAQGKPRVMGHKAGVKTVRRAVSTAREMGIDSLTLF 75
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP E++ L++L + L++ L KN +++ +IG+ + + + AE
Sbjct: 76 AFSSENWRRPDKEVTLLMELFFTVLQREIKLLHKNGVRLNIIGDISRFSERLQKQIAAAE 135
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T NTG+ L +A NY R +I +A K + + ++SG + S+ ++++L + P+
Sbjct: 136 EKTAENTGMVLNVAANYGGRWDIMQAAKTLAEKVQSGEMNSNQFTEEALSQHLSMQNQPE 195
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRTGG+ R+S+F+LWQ AY+E VF WPDF F A+ + R RRFG
Sbjct: 196 VDLMIRTGGDYRISNFVLWQAAYAELVFTDTLWPDFDEHAFKQAVATFASRQRRFG 251
>gi|206579804|ref|YP_002240338.1| di-trans,poly-cis-decaprenylcistransferase [Klebsiella pneumoniae
342]
gi|290512465|ref|ZP_06551831.1| di-trans,poly-cis-decaprenylcistransferase [Klebsiella sp. 1_1_55]
gi|206568862|gb|ACI10638.1| di-trans,poly-cis-decaprenylcistransferase [Klebsiella pneumoniae
342]
gi|289774806|gb|EFD82808.1| di-trans,poly-cis-decaprenylcistransferase [Klebsiella sp. 1_1_55]
Length = 258
Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 89/232 (38%), Positives = 142/232 (61%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++AFS NW RP
Sbjct: 24 RHVAIIMDGNGRWAKRQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRP 83
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E+S L++L L SL ++N+++RVIG+ + + +++AE T NTGL
Sbjct: 84 AQEVSALMELFVWALDSEVKSLHRHNVRLRVIGDTTRFNARLQERIRKAEALTANNTGLT 143
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L IA NY R +I++ ++ + + ++ G++ ++ ++++ + ++ DL+IRTGGE
Sbjct: 144 LNIAANYGGRWDITQGVRLLAKQVQDGTLLPEEITEEMLSQQVCMHELAPVDLVIRTGGE 203
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
R+S+FL+WQ+AY+E F WPDF+ + F AL+ + R+RRFGG G
Sbjct: 204 HRISNFLIWQIAYAELYFTDVLWPDFAEQDFEGALHAFVNRERRFGGTEPGG 255
>gi|283798095|ref|ZP_06347248.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium sp. M62/1]
gi|291074239|gb|EFE11603.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium sp. M62/1]
gi|295091733|emb|CBK77840.1| undecaprenyl diphosphate synthase [Clostridium cf. saccharolyticum
K10]
Length = 240
Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 109/240 (45%), Positives = 151/240 (62%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + P H+ +I+DGNGRWA RGLPR AGH++G + V AA +GI LT+
Sbjct: 1 METDISKLVIPRHVALILDGNGRWAKKRGLPRTAGHKQGCVTVEKTVEDAARLGIDYLTV 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW+R V E+ L++L + +LK+ + NN++V++IG+R D DI+ +
Sbjct: 61 YGFSTENWKRSVEEVGALMQLFRYYLKRLLKIARVNNVRVKMIGDRTRFDQDIIEGIDRL 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E +T NTG+ IA NY RDEI RA+K + +D +SG + V +A YLDT+ +P
Sbjct: 121 ERETADNTGMTFVIAVNYGGRDEIRRAVKQMMRDAKSGILDPDAVTEDTVASYLDTAGIP 180
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GE RLS++LLWQ+AYSE WPDF+RE A+ QYN R+RRFGG
Sbjct: 181 DPDLLIRTSGEIRLSNYLLWQLAYSEIYITDCLWPDFNREELVKAIAQYNTRERRFGGAK 240
>gi|126173692|ref|YP_001049841.1| undecaprenyl diphosphate synthase [Shewanella baltica OS155]
gi|125996897|gb|ABN60972.1| Undecaprenyl pyrophosphate synthetase [Shewanella baltica OS155]
Length = 275
Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 92/241 (38%), Positives = 146/241 (60%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ ++ S P H+ IIMDGNGRWA +G PR GH+ G++ V+ A+++GI++LT+F
Sbjct: 28 LPELVKQSLPKHVAIIMDGNGRWAQTQGKPRVLGHKAGVKAVRRAVSTASQLGIESLTLF 87
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP E+S L++L + L++ L KN +K+++IG+ + + A+
Sbjct: 88 AFSSENWRRPDKEVSLLMELFFTVLQREIKLLHKNQVKLKIIGDISRFSARLQKQIAAAQ 147
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
D+T NTGL L +A NY R +I +A + + + +E+G + S ++ +L + +
Sbjct: 148 DKTSGNTGLVLNVAANYGGRWDILQAAQKLAEKVETGEMTSSQFTEEALSAHLCMQNQSE 207
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRTGG+ R+S+F+LWQ AY+E VF WPDF + F A+ + R RRFG
Sbjct: 208 VDLMIRTGGDCRISNFVLWQAAYAELVFTDTLWPDFDEQAFHEAIAIFASRQRRFGLTGS 267
Query: 242 K 242
+
Sbjct: 268 Q 268
>gi|255038133|ref|YP_003088754.1| undecaprenyl diphosphate synthase [Dyadobacter fermentans DSM
18053]
gi|254950889|gb|ACT95589.1| undecaprenyl diphosphate synthase [Dyadobacter fermentans DSM
18053]
Length = 250
Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 95/243 (39%), Positives = 147/243 (60%), Gaps = 1/243 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + + + P HI +IMDGNGRWA +G R GHR I+ E+ AE+G+ LT+
Sbjct: 1 MKELIDTGNLPKHIAVIMDGNGRWAQNQGAARVFGHRNAIKAVREVTEGCAELGVSFLTL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP E+ L++L+ + ++ KNN+K+ IG+ SL L +A
Sbjct: 61 YAFSTENWARPEFEVRALMELLVQSIGNELPTMMKNNVKLDTIGDTASLPRSCQNQLAKA 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+TR NTGLNL +A YS + +I++A + + +D+ +G + +++ ++A L T P
Sbjct: 121 IAETRNNTGLNLILALGYSGKWDITQAARKLAEDVRNGVLLPEEINEEMVAGNLSTEHRP 180
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEY-WPDFSRELFFHALNQYNLRDRRFGGL 239
+ DL++RTGG+ R+S+FLLWQ+AYSE F + WPDF RE + A+ Y R+RRFG
Sbjct: 181 EVDLMLRTGGDHRISNFLLWQLAYSELYFYEDLFWPDFRREHLYEAILSYQNRERRFGKT 240
Query: 240 SKK 242
++
Sbjct: 241 GEQ 243
>gi|116492647|ref|YP_804382.1| undecaprenyl pyrophosphate synthetase [Pediococcus pentosaceus ATCC
25745]
gi|116102797|gb|ABJ67940.1| Undecaprenyl pyrophosphate synthetase [Pediococcus pentosaceus ATCC
25745]
Length = 249
Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 98/243 (40%), Positives = 154/243 (63%), Gaps = 3/243 (1%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + ++ + P H+ IIMDGNGRWA R +PR AGH++G+EV I +A+++G+K LT++
Sbjct: 7 LETELNENIPKHVAIIMDGNGRWAQKRFMPRVAGHKRGMEVVKTITKSASKLGVKVLTLY 66
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E+S L+KL +F K L + ++VRV G+ L +++A
Sbjct: 67 AFSTENWKRPQDEVSFLMKLPITFFNKFVPELIEEGVQVRVTGDIDGLPQATQDAVRKAI 126
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS---D 178
+ T T + L A NY SRDEI++ +++I Q + + + +D +I +L T+ +
Sbjct: 127 EDTAQGTKMILNFALNYGSRDEITKMVQSIAQAVNTKQLDVDKIDEQVIENHLQTNFLGE 186
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+ +PD++IRT GE+R+S+FLLWQ+AYSE VF WPDF ++F + +Y RDRRFG
Sbjct: 187 LSNPDVLIRTSGEERISNFLLWQIAYSELVFTDTLWPDFDEKIFIEMIKEYQKRDRRFGA 246
Query: 239 LSK 241
+ K
Sbjct: 247 IKK 249
>gi|254448786|ref|ZP_05062243.1| di-trans,poly-cis-decaprenylcistransferase [gamma proteobacterium
HTCC5015]
gi|198261627|gb|EDY85915.1| di-trans,poly-cis-decaprenylcistransferase [gamma proteobacterium
HTCC5015]
Length = 248
Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 103/242 (42%), Positives = 157/242 (64%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M S + + P HI IIMDGNGRWA RGLPR AGH+ G++ ++ A I++LT+
Sbjct: 1 MSESEATDNKPQHIAIIMDGNGRWAKRRGLPRTAGHKAGVKAARAVIEACEPHRIQHLTL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW+RP E+S L+++ S L K SLK+ N+++R IG++ + D+ + + A
Sbjct: 61 FAFSSENWKRPEDEVSSLMQIFVSTLSKELKSLKERNVRLRFIGDKSAFDEKLRDHMASA 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E QT NTGL L IA NY R ++++A + + +++G + + +A++L S++P
Sbjct: 121 ETQTADNTGLQLNIAVNYGGRWDMTQAAYALAKKVQNGIIEPRHITEQTVAQHLSLSELP 180
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRTGGE R+S+FLLWQ+AY+E F P++WPDF + A+ + R+RRFG S
Sbjct: 181 DPDLMIRTGGEHRISNFLLWQLAYAEIYFSPDWWPDFGAQQINDAVAWFGARERRFGQTS 240
Query: 241 KK 242
++
Sbjct: 241 EQ 242
>gi|152999981|ref|YP_001365662.1| undecaprenyl diphosphate synthase [Shewanella baltica OS185]
gi|160874602|ref|YP_001553918.1| undecaprenyl diphosphate synthase [Shewanella baltica OS195]
gi|217974056|ref|YP_002358807.1| undecaprenyl diphosphate synthase [Shewanella baltica OS223]
gi|151364599|gb|ABS07599.1| undecaprenyl diphosphate synthase [Shewanella baltica OS185]
gi|160860124|gb|ABX48658.1| undecaprenyl diphosphate synthase [Shewanella baltica OS195]
gi|217499191|gb|ACK47384.1| undecaprenyl diphosphate synthase [Shewanella baltica OS223]
gi|315266843|gb|ADT93696.1| undecaprenyl diphosphate synthase [Shewanella baltica OS678]
Length = 275
Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 91/241 (37%), Positives = 146/241 (60%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ ++ S P H+ IIMDGNGRWA +G PR GH+ G++ V+ A+++GI++LT+F
Sbjct: 28 LPELVKQSLPKHVAIIMDGNGRWAQTQGKPRVLGHKAGVKAVRRAVSTASQLGIESLTLF 87
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP E+S L++L + L++ L KN +K+++IG+ + + A+
Sbjct: 88 AFSSENWRRPDKEVSLLMELFFTVLQREIKLLHKNQVKLKIIGDISRFSARLQKQIAAAQ 147
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T NTGL L +A NY R +I +A + + + +E+G + S ++ +L + +
Sbjct: 148 EKTSGNTGLVLNVAANYGGRWDILQAAQKLAEKVETGEMTSSQFTEEALSAHLCMQNQSE 207
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRTGG+ R+S+F+LWQ AY+E VF WPDF + F A+ + R RRFG
Sbjct: 208 VDLMIRTGGDCRISNFVLWQAAYAELVFTDTLWPDFDEQAFHEAIAIFASRQRRFGLTGS 267
Query: 242 K 242
+
Sbjct: 268 Q 268
>gi|261379561|ref|ZP_05984134.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria subflava
NJ9703]
gi|284798035|gb|EFC53382.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria subflava
NJ9703]
Length = 248
Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 100/238 (42%), Positives = 145/238 (60%), Gaps = 6/238 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ S+ P HI +IMDGNGRWA R LPR GH++G++ +V AE+G++ LT+FAFS
Sbjct: 9 LEHSAIPRHIAVIMDGNGRWAKKRFLPRVMGHKRGLDALENMVKHCAELGVRYLTVFAFS 68
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRRP E+S L+ L L+K L NN+++RVIG+R + +IL ++ AE T
Sbjct: 69 TENWRRPEEEVSFLMGLFLQALQKQVRRLHDNNMRLRVIGSRERFNAEILKGIEAAEALT 128
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NTGL L IA +Y R +I A + + + ++ +++YL D P+PDL
Sbjct: 129 ANNTGLTLSIAADYGGRWDILHAANQLIAEGAT------EITEEALSRYLMLGDAPEPDL 182
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTGGE R+S+FLLWQ+AY+E F WPDF+ + A+ + R+RRFG S++
Sbjct: 183 FIRTGGETRISNFLLWQMAYAELYFTDTLWPDFNEKSLNEAIVSFQKRERRFGRTSEQ 240
>gi|270292050|ref|ZP_06198265.1| undecaprenyl diphosphate synthase [Streptococcus sp. M143]
gi|270279578|gb|EFA25420.1| undecaprenyl diphosphate synthase [Streptococcus sp. M143]
Length = 258
Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 103/238 (43%), Positives = 139/238 (58%), Gaps = 4/238 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ + P HIGIIMDGNGRWA R PR GH+ G+E ++ AA ++G+K +T++AFS
Sbjct: 21 VPTQVPAHIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQKVTKAANKMGVKVITVYAFST 80
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+ ++ L F L NN+K+++IG L LK+AE+ T+
Sbjct: 81 ENWTRPDQEVKFIMNLPVEFYDNYVPELHANNVKIQMIGETDRLPKPTFEALKKAEELTQ 140
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----D 181
NTGL L A NY R EI++A+K + QD+ + D+ +I YL T +P D
Sbjct: 141 NNTGLILNFALNYGGRAEITQALKGLAQDVLDAKINPGDITEDMIGDYLFTQHLPKDLRD 200
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDLIIRT GE RLS+FL WQ AYSE F WPDF A+ +N R+RRFGG+
Sbjct: 201 PDLIIRTSGELRLSNFLPWQAAYSELYFTDTLWPDFDEAALQEAIAAFNHRNRRFGGV 258
>gi|322420122|ref|YP_004199345.1| undecaprenyl diphosphate synthase [Geobacter sp. M18]
gi|320126509|gb|ADW14069.1| undecaprenyl diphosphate synthase [Geobacter sp. M18]
Length = 248
Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 96/242 (39%), Positives = 142/242 (58%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M S+ P H+ +IMDGNGRWA R L R GH+KG+E IV + +GI LT+
Sbjct: 1 MDNSLDPKKLPRHLAVIMDGNGRWAKQRMLRRIVGHQKGVETVRVIVEECSRLGIGYLTL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW RP +E+ L+ L+K +++ + +N+I+ VIG R L +D+ ++ A
Sbjct: 61 FAFSAENWLRPKTEVKALMALLKQYIRGETTRMMQNDIRFNVIGKRADLPEDVNREIQSA 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
++T N G+ L +A +Y SR EI A + + + +G + +D + L T+ +P
Sbjct: 121 IEKTAGNRGMLLTLALSYGSRQEIVAAAQKLATEAAAGRIDPESIDENAFTGSLFTAGIP 180
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GE R+S+FLLWQ+AY+E F WPDF + A Y R+RRFG S
Sbjct: 181 DPDLLIRTSGEMRISNFLLWQLAYAELYFTEVNWPDFDKHELARAFCDYQSRERRFGKTS 240
Query: 241 KK 242
++
Sbjct: 241 EQ 242
>gi|241760632|ref|ZP_04758724.1| undecaprenyl pyrophosphate synthetase 1 [Neisseria flavescens
SK114]
gi|241318813|gb|EER55339.1| undecaprenyl pyrophosphate synthetase 1 [Neisseria flavescens
SK114]
Length = 248
Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 99/238 (41%), Positives = 146/238 (61%), Gaps = 6/238 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ S+ P HI +IMDGNGRWA R LPR GH++G++ +V AE+G++ LT+FAFS
Sbjct: 9 LEHSAIPRHIAVIMDGNGRWAKKRFLPRVMGHKRGLDALENMVKHCAELGVQYLTVFAFS 68
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRRP E+S L+ L L+K L NN+++R+IG+R + +IL ++ AE T
Sbjct: 69 TENWRRPEEEVSFLMGLFLQALQKQVRRLHDNNMRLRIIGSRERFNAEILKGIEAAEALT 128
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NTGL L IA +Y R +I +A + + + ++ +++YL D P+PDL
Sbjct: 129 ANNTGLTLSIAADYGGRWDILQAANQLIAEGVT------EITEEALSRYLMLGDAPEPDL 182
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTGGE R+S+FLLWQ+AY+E F WPDF+ + A+ + R+RRFG S++
Sbjct: 183 FIRTGGETRISNFLLWQMAYAELYFTDTLWPDFNEKSLNEAIASFQKRERRFGRTSEQ 240
>gi|149915216|ref|ZP_01903744.1| undecaprenyl diphosphate synthase [Roseobacter sp. AzwK-3b]
gi|149810937|gb|EDM70776.1| undecaprenyl diphosphate synthase [Roseobacter sp. AzwK-3b]
Length = 241
Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 112/239 (46%), Positives = 150/239 (62%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + + P H+ IIMDGNGRWA ARG PR GH G +IV+A E+G+ LTI
Sbjct: 1 MARNSPPTGGPRHVAIIMDGNGRWAQARGRPRLFGHHAGARRVRDIVSACPELGVDYLTI 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW+R +E+S L+ L + ++ K K N++VR IG+R LD + ++ EA
Sbjct: 61 FAFSTENWKRTQTEVSGLMALFRRYIIKEMQEFVKENVRVRFIGDRRRLDRSLQDLMDEA 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E T T LNL IA NY RDE++RA K + QD+ G + VD + KYLDT +P
Sbjct: 121 ETMTSHCTRLNLTIALNYGGRDEVARATKRLAQDVALGRLDPEAVDEETLPKYLDTCVLP 180
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DP+L+IRT GE R+S+FLLWQ AYSE+ FI WPDF++++F L Y R+RRFG +
Sbjct: 181 DPELVIRTSGEARISNFLLWQSAYSEYEFIDTLWPDFTKDIFTDVLRSYGARERRFGAV 239
>gi|257784512|ref|YP_003179729.1| undecaprenyl diphosphate synthase [Atopobium parvulum DSM 20469]
gi|257473019|gb|ACV51138.1| undecaprenyl diphosphate synthase [Atopobium parvulum DSM 20469]
Length = 259
Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 97/239 (40%), Positives = 139/239 (58%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
++ + + P H+ IIMDGNGRWA ARGL R GH+ G+ E V + +G+ L+++
Sbjct: 21 LSDINLETIPSHVSIIMDGNGRWATARGLDRTEGHKAGVLSLREAVTTSVRLGLDVLSVY 80
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
+FS NW+RP E+ L++L L K + N+K+R G+ +L + +
Sbjct: 81 SFSTENWKRPQHEVDLLMRLFAETLLKELPLFYQENVKLRFFGDLEALPEKTRKTFQRGL 140
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
D+T NTG+ +A NY SR E++RA + I G V + V S KYL T+ +PD
Sbjct: 141 DETAQNTGMTFALAVNYGSRAELTRAAVFLANQIAEGKVSADSVTPSDFEKYLYTAGLPD 200
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
PDL+IRT GE RLS++LLWQ+AYSE YWPDFS+ A+ Y R+RRFGG+
Sbjct: 201 PDLLIRTSGELRLSNYLLWQLAYSELYVTQTYWPDFSKWDVLRAIKDYQGRERRFGGVK 259
>gi|153009363|ref|YP_001370578.1| undecaprenyl pyrophosphate synthase [Ochrobactrum anthropi ATCC
49188]
gi|151561251|gb|ABS14749.1| undecaprenyl diphosphate synthase [Ochrobactrum anthropi ATCC
49188]
Length = 255
Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 123/233 (52%), Positives = 161/233 (69%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA AR LPR AGHR G+E EIV AA + G+ LT+FAFS NW R
Sbjct: 4 PRHIAIIMDGNGRWAKARNLPRSAGHRAGVEALREIVRAAGDRGLGYLTLFAFSSENWSR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+++L+ L+K F+++ L +NN++V +IG R L DI +L EAE TR NTGL
Sbjct: 64 PSGEVNDLLGLLKIFIRRDLAELHRNNVRVSIIGEREELAADIRALLVEAETLTRRNTGL 123
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL IAFNY SRDEI RA++++ +D+ +G + + S L++ LDT+ +PDPDLIIRT G
Sbjct: 124 NLIIAFNYGSRDEIVRAVRSLARDVAAGLLDPASISSELVSANLDTAGIPDPDLIIRTSG 183
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
E RLS+FLLWQ AYSEF+F+P +WPDF A + R+RRFGG+ +
Sbjct: 184 EMRLSNFLLWQAAYSEFLFLPIHWPDFRASDLDAAYEAFRQRERRFGGVEVRA 236
>gi|302386240|ref|YP_003822062.1| undecaprenyl diphosphate synthase [Clostridium saccharolyticum WM1]
gi|302196868|gb|ADL04439.1| undecaprenyl diphosphate synthase [Clostridium saccharolyticum WM1]
Length = 240
Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 105/231 (45%), Positives = 146/231 (63%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P+H+ II+DGNGRWA RGLPR GH++G + V AA +GIK LT++ FS NW+
Sbjct: 10 IPEHVAIILDGNGRWAKKRGLPRSMGHKEGCVTVEKTVEDAARLGIKFLTVYGFSTENWK 69
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ L++L + ++ + K NN++V++IG+R D DI+ + + +QT+ NTG
Sbjct: 70 RTSDEVGALMQLFRYYMVRLLKVAKANNVRVKMIGDRNRFDQDIIEGISKLVEQTKNNTG 129
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L IA NY RDEI RA + I D G + D+ + A YLDT +PDPDL+IRT
Sbjct: 130 LTFVIAVNYGGRDEIVRAARKIMMDTAEGKLLPEDMTEEIFASYLDTEGIPDPDLLIRTS 189
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
GE RLS++LLWQ+AY+E YWPDF+ E A+ YN R+RRFGG+
Sbjct: 190 GELRLSNYLLWQLAYTELYVTDCYWPDFNMEEMKKAIAAYNSRERRFGGVK 240
>gi|163760887|ref|ZP_02167966.1| undecaprenyl pyrophosphate synthase [Hoeflea phototrophica DFL-43]
gi|162281931|gb|EDQ32223.1| undecaprenyl pyrophosphate synthase [Hoeflea phototrophica DFL-43]
Length = 248
Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 122/238 (51%), Positives = 166/238 (69%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
S P H+ IIMDGNGRWA ARGL R AGHR G+E E V A E I+ LT+FAFS
Sbjct: 5 RPSKTPRHVAIIMDGNGRWAGARGLARTAGHRAGVERVREAVRTAHEANIEYLTLFAFSS 64
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+S+L+ ++K F++K L + N+ V+VIG R SL DI +L EAED+TR
Sbjct: 65 ENWNRPEEEVSDLMGILKYFIRKDLAELHRENVCVKVIGCRQSLKPDIRGLLDEAEDRTR 124
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
NTG+ L IAFNY SR+E+ RA + I + +++G + ++ ++ ++DT+ +PDPDL+
Sbjct: 125 GNTGVTLVIAFNYGSRNELVRATRLIAEAVQAGQLDPCSINEHSLSAFVDTAGIPDPDLV 184
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
IRT GE+RLS+FLLWQ AYSEFVF+P WPDF R+ F +AL++Y+ RDRRFG + +
Sbjct: 185 IRTSGEQRLSNFLLWQAAYSEFVFLPCLWPDFDRQAFLNALDEYSRRDRRFGAIPARA 242
>gi|256823123|ref|YP_003147086.1| undecaprenyl diphosphate synthase [Kangiella koreensis DSM 16069]
gi|256796662|gb|ACV27318.1| undecaprenyl diphosphate synthase [Kangiella koreensis DSM 16069]
Length = 240
Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 104/238 (43%), Positives = 137/238 (57%), Gaps = 7/238 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IIMDGNGRWA ARG R GH+ G+E E+ E+G+K LT+FAFS
Sbjct: 7 VTTDKLPQHIAIIMDGNGRWAQARGKKRVFGHKAGMERAREMAETCGELGVKFLTLFAFS 66
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP E+S L+ L + LK L KNN+K++VIG++ D + + +AE T
Sbjct: 67 SENWNRPAEEVSFLMDLFATSLKNESKKLNKNNVKLKVIGDKAGFDKGLQKAIDKAEALT 126
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N GL L IA NY R +I +A + + ++ + + KYL T P+PDL
Sbjct: 127 ADNDGLTLNIAANYGGRWDIMQASQQLL-------TSGRELTEANLVKYLATGTAPEPDL 179
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IRTGGEKR+S+FLLWQ AYSE F WPDF E AL Y R RRFG ++
Sbjct: 180 LIRTGGEKRISNFLLWQAAYSELYFSDVLWPDFDGEQLKLALADYAQRQRRFGKTGEQ 237
>gi|218288328|ref|ZP_03492627.1| undecaprenyl diphosphate synthase [Alicyclobacillus acidocaldarius
LAA1]
gi|218241687|gb|EED08860.1| undecaprenyl diphosphate synthase [Alicyclobacillus acidocaldarius
LAA1]
Length = 254
Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 94/230 (40%), Positives = 136/230 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+IMDGNGRWA RGLPR AGH G+ E + A + GI+ +T++AFS NW+R
Sbjct: 25 PRHIGLIMDGNGRWAQKRGLPRIAGHHAGMLAMKEAIRACDDFGIECVTLYAFSTENWKR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L++L + F + L + N++VR IG+ L ++ A T+ NTG+
Sbjct: 85 PAAEVDYLMRLPEQFFRSEIDELVRRNVRVRFIGDTERLPAHTQETVRRAIQCTQHNTGM 144
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ A NY R EI A++ +++ G + + +YLDT+ +P DL+IRT G
Sbjct: 145 MVNFALNYGGRMEIVAAMERYAREVMEGRATVGQLTEATCDRYLDTAGLPPLDLVIRTSG 204
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E RLS+FLLWQ AY+E F WPDF+R+ + A+ Y R RRFG +
Sbjct: 205 EIRLSNFLLWQAAYAELWFTDVLWPDFTRDDLYQAICDYAKRKRRFGAIE 254
>gi|254476800|ref|ZP_05090186.1| undecaprenyl pyrophosphate synthetase 1 [Ruegeria sp. R11]
gi|214031043|gb|EEB71878.1| undecaprenyl pyrophosphate synthetase 1 [Ruegeria sp. R11]
Length = 244
Score = 289 bits (741), Expect = 1e-76, Method: Composition-based stats.
Identities = 107/230 (46%), Positives = 147/230 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA ARG PR GH G + E+V +G+K LTIFAFS NW+R
Sbjct: 14 PKHVAIIMDGNGRWAQARGRPRLFGHHAGAKRVREVVECCPALGVKYLTIFAFSTENWKR 73
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E++ L+ L + ++ K +L + N++VR IG+R+ LD ++ ++ + E +T N G
Sbjct: 74 TQVEVAGLMSLFRRYISKEMKALSQRNVRVRFIGDRVRLDKKLVGLMDQLEQETSCNDGT 133
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L IA NY RDE++RA K + +D+ G + DVD + KYLDT +PDPDL+IRT G
Sbjct: 134 HLTIALNYGGRDEVARATKRLARDVAEGRLNPDDVDEETLPKYLDTHVLPDPDLVIRTSG 193
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E R+S+FLLWQ AY+E+ FI WPDFS E + Y RDRRFG +
Sbjct: 194 EARISNFLLWQSAYAEYEFIDTLWPDFSAEELKRLCDAYGQRDRRFGAVK 243
>gi|16763611|ref|NP_459226.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|56412494|ref|YP_149569.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|62178791|ref|YP_215208.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|161612593|ref|YP_001586558.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167553366|ref|ZP_02347115.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
gi|167990107|ref|ZP_02571207.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168230529|ref|ZP_02655587.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
gi|168235000|ref|ZP_02660058.1| poly-cis-decaprenylcistransferase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|168244988|ref|ZP_02669920.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
gi|168263911|ref|ZP_02685884.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
gi|168464215|ref|ZP_02698118.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
gi|168823250|ref|ZP_02835250.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
gi|194450089|ref|YP_002044211.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194470073|ref|ZP_03076057.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|194736697|ref|YP_002113244.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197248928|ref|YP_002145226.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197264409|ref|ZP_03164483.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|197361429|ref|YP_002141065.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|198244628|ref|YP_002214182.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|200389072|ref|ZP_03215684.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|204927170|ref|ZP_03218372.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Javiana str. GA_MM04042433]
gi|205351558|ref|YP_002225359.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|207855739|ref|YP_002242390.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|224582069|ref|YP_002635867.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|238911287|ref|ZP_04655124.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|42559854|sp|Q8ZRP2|UPPS_SALTY RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|73920275|sp|Q5PD68|UPPS_SALPA RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|16418726|gb|AAL19185.1| undecaprenyl pyrophosphate synthetase (di-trans,
poly-cis-decaprenylcistransferase) [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|56126751|gb|AAV76257.1| undecaprenyl pyrophosphate synthetase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|62126424|gb|AAX64127.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|161361957|gb|ABX65725.1| hypothetical protein SPAB_00284 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194408393|gb|ACF68612.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
gi|194456437|gb|EDX45276.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|194712199|gb|ACF91420.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. CVM19633]
gi|195632769|gb|EDX51223.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
gi|197092905|emb|CAR58334.1| undecaprenyl pyrophosphate synthetase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|197212631|gb|ACH50028.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
gi|197242664|gb|EDY25284.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|197291793|gb|EDY31143.1| poly-cis-decaprenylcistransferase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|197939144|gb|ACH76477.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Dublin str. CT_02021853]
gi|199606170|gb|EDZ04715.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|204323835|gb|EDZ09030.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Javiana str. GA_MM04042433]
gi|205271339|emb|CAR36132.1| undecaprenyl pyrophosphate synthetase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|205322178|gb|EDZ10017.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
gi|205331306|gb|EDZ18070.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205334951|gb|EDZ21715.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
gi|205336221|gb|EDZ22985.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
gi|205340480|gb|EDZ27244.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
gi|205347444|gb|EDZ34075.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
gi|206707542|emb|CAR31816.1| undecaprenyl pyrophosphate synthetase [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|224466596|gb|ACN44426.1| undecaprenyl pyrophosphate synthetase [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|261245453|emb|CBG23243.1| undecaprenyl pyrophosphate synthetase [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|267991912|gb|ACY86797.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301156848|emb|CBW16324.1| undecaprenyl pyrophosphate synthetase [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|312911191|dbj|BAJ35165.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|320084475|emb|CBY94268.1| undecaprenyl pyrophosphate synthetase [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|322640691|gb|EFY37342.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322672187|gb|EFY68299.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322713245|gb|EFZ04816.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
gi|323128541|gb|ADX15971.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|323223352|gb|EGA07687.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|326621925|gb|EGE28270.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Dublin str. 3246]
gi|326626584|gb|EGE32927.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9]
gi|332987173|gb|AEF06156.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 252
Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats.
Identities = 90/239 (37%), Positives = 140/239 (58%), Gaps = 4/239 (1%)
Query: 6 MSSSPP----DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+S + P H+ IIMDGNGRWA +G R GH+ G + V+ AA GI LT++
Sbjct: 8 VSENLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIDALTLY 67
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+S L++L L SL ++N+++R+IG+ + + ++++E
Sbjct: 68 AFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDISRFNSRLQERIRKSE 127
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T NTGL L IA NY R +I + ++ + + +++G + +D + + + ++
Sbjct: 128 ALTAHNTGLTLNIAANYGGRWDIVQGVRQLAEQVQAGVLRPDQIDEERLGQQICMHELAP 187
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRTGGE R+S+FLLWQ+AY+E F WPDF + F AL+ + R+RRFGG
Sbjct: 188 VDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALHAFANRERRFGGTE 246
>gi|163736297|ref|ZP_02143716.1| undecaprenyl diphosphate synthase [Phaeobacter gallaeciensis BS107]
gi|163741174|ref|ZP_02148566.1| undecaprenyl diphosphate synthase [Phaeobacter gallaeciensis 2.10]
gi|161385527|gb|EDQ09904.1| undecaprenyl diphosphate synthase [Phaeobacter gallaeciensis 2.10]
gi|161390167|gb|EDQ14517.1| undecaprenyl diphosphate synthase [Phaeobacter gallaeciensis BS107]
Length = 252
Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats.
Identities = 105/234 (44%), Positives = 148/234 (63%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
P H+ IIMDGNGRWA ARG PR GH G + E+V +G+K LTIFAFS
Sbjct: 18 PQRGPKHVAIIMDGNGRWAQARGRPRLFGHHAGAKRVREVVECCPALGVKYLTIFAFSTE 77
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW+R E++ L+ L + ++ K +L + N++VR IG+R+ LD ++ ++ + E +T
Sbjct: 78 NWKRTQVEVAGLMSLFRRYISKEMKALSQRNVRVRFIGDRVRLDKKLVTLMDQLEQETAC 137
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N G +L IA NY SRDE++RA K + +D+ +G + DVD + +YLDT +PDPDL+I
Sbjct: 138 NDGTHLTIALNYGSRDEVARATKRLAEDVAAGRLDPADVDEETLPRYLDTHVLPDPDLVI 197
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RT GE R+S+FLLWQ AY+E+ FI WPDF+ + Y RDRRFG +
Sbjct: 198 RTSGEARISNFLLWQSAYAEYEFIDTLWPDFTADEMDRLCRSYGQRDRRFGAVK 251
>gi|39997015|ref|NP_952966.1| undecaprenyl pyrophosphate synthase [Geobacter sulfurreducens PCA]
gi|42559732|sp|P60482|UPPS_GEOSL RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|39983903|gb|AAR35293.1| undecaprenyl diphosphate synthase [Geobacter sulfurreducens PCA]
gi|298506032|gb|ADI84755.1| undecaprenyl diphosphate synthase [Geobacter sulfurreducens KN400]
Length = 246
Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats.
Identities = 106/238 (44%), Positives = 146/238 (61%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
++ P H+ IIMDGNGRWA R L R GH+KG+E IV + +GI LT+FAFS
Sbjct: 4 LIPDKLPRHLAIIMDGNGRWAQERMLTRIIGHQKGVETVRIIVEECSRLGIGYLTLFAFS 63
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP +E+ L+ L+K ++ + NNI+ VIGNR L D+ ++ A D+T
Sbjct: 64 AENWLRPKTEVKALMALLKKYIASEAARMDANNIRFNVIGNRDELPPDVNKAVQGAIDRT 123
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NTG+ L +A +Y +R EI A I DI SG + + D+ + A YL TS +PDPD
Sbjct: 124 SGNTGMILTLALSYGARQEIMTAATRIASDIASGVLKADDLSETAFASYLFTSGLPDPDF 183
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IRT GE R+S+FLLWQ+AY+EF F WP+F+ E + AL+ Y R+RRFG S +
Sbjct: 184 LIRTSGEMRISNFLLWQLAYTEFYFSSVNWPEFTPEELYRALSDYQARERRFGRTSAQ 241
>gi|303240824|ref|ZP_07327337.1| undecaprenyl diphosphate synthase [Acetivibrio cellulolyticus CD2]
gi|302591712|gb|EFL61447.1| undecaprenyl diphosphate synthase [Acetivibrio cellulolyticus CD2]
Length = 254
Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats.
Identities = 101/235 (42%), Positives = 147/235 (62%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ ++ P HI IIMDGNGRWA R LPR GH++G + I E+GIK LT++AFS
Sbjct: 20 IDYNNLPVHIAIIMDGNGRWAKERRLPRTVGHKEGSNNLDRIAHFCGEIGIKYLTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP SE+ L+ L+ +LK ++ ++++R IG+ +L +I + T
Sbjct: 80 TENWKRPKSEVDTLMDLLLDYLKNAESHMRGRSVRIRTIGDSSALSKEIQEQIVRVTKLT 139
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N+GL L IA NY RDEI A+K + +D+ G + ++D ++I L T D+PDPDL
Sbjct: 140 ENNSGLTLNIAINYGGRDEIVHAVKELARDVAEGKIKCDNIDETMITNRLYTGDMPDPDL 199
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IR GGEKR+S+FL+WQ AY+EF + WPDF +E A+ +Y R+RRFGG+
Sbjct: 200 LIRPGGEKRISNFLIWQSAYTEFWYTDVLWPDFQKEHILEAIKEYQKRNRRFGGV 254
>gi|51245010|ref|YP_064894.1| undecaprenyl pyrophosphate synthetase [Desulfotalea psychrophila
LSv54]
gi|50876047|emb|CAG35887.1| probable undecaprenyl pyrophosphate synthetase [Desulfotalea
psychrophila LSv54]
Length = 261
Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats.
Identities = 100/238 (42%), Positives = 148/238 (62%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P HI IIMDGNGRWA AR PR GH+ G + EIV+ ++GI LT++AFS
Sbjct: 19 IDPLHLPAHIAIIMDGNGRWAQARKRPRLFGHKAGADSVEEIVSICCQLGIPALTLYAFS 78
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP +E+S L+ +++ +L+ ++KNNI++ IG+ L + L + +T
Sbjct: 79 SENWKRPKAEVSGLMSILQKYLRAELPKMQKNNIRLHCIGDIERLPSAVRDTLLQVMGET 138
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NTG+ L +A +Y RDEI RAIK I + +G + D+ L++ YLDT+ +P+PDL
Sbjct: 139 AKNTGMILSLALSYGGRDEICRAIKKISAECVAGDLEETDITPDLLSDYLDTAILPEPDL 198
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IRTGGE RLS+FLLWQ++Y+E F WP+F E A+ + R+RRFG + +
Sbjct: 199 LIRTGGESRLSNFLLWQLSYAELYFTDIMWPEFRTEQLATAIASFQERERRFGKIGAQ 256
>gi|290968869|ref|ZP_06560406.1| di-trans,poly-cis-decaprenylcistransferase [Megasphaera genomosp.
type_1 str. 28L]
gi|290781165|gb|EFD93756.1| di-trans,poly-cis-decaprenylcistransferase [Megasphaera genomosp.
type_1 str. 28L]
Length = 258
Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats.
Identities = 101/236 (42%), Positives = 151/236 (63%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ S P H+ IIMDGNGRWA + LPR GHR G + +IV AA ++GIK LT++AFS
Sbjct: 23 LDVSRLPRHVAIIMDGNGRWAKRKNLPRHIGHRVGADTLKKIVTAADDLGIKVLTVYAFS 82
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP +E+S ++KL++ +L+K L ++N++++ IG+ L ++ +A
Sbjct: 83 TENWKRPEAEVSYIMKLMQDYLRKNLLELAEHNVRLQFIGDISCLAPELQKSFADAVQSM 142
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NTGL L IA NY R E++RA++ + + +E G V + D+D +A L T+ D DL
Sbjct: 143 ENNTGLLLNIAVNYGGRAELTRAVRTLAEQVEQGKVRAGDIDEERLAGELYTAPDNDVDL 202
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
+IR G + R+S+FLLWQ+AY+EF + P WPDF+++ AL Y R+RRFGGL
Sbjct: 203 VIRPGNDFRISNFLLWQIAYAEFWYTPICWPDFTKDTLLEALYAYQGRERRFGGLK 258
>gi|126737624|ref|ZP_01753354.1| undecaprenyl diphosphate synthase [Roseobacter sp. SK209-2-6]
gi|126721017|gb|EBA17721.1| undecaprenyl diphosphate synthase [Roseobacter sp. SK209-2-6]
Length = 249
Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats.
Identities = 106/230 (46%), Positives = 148/230 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +RG PR GH G E+V E+G+K LTIFAFS NW+R
Sbjct: 19 PHHVAIIMDGNGRWAQSRGRPRLFGHHAGARRVREVVECCPELGVKYLTIFAFSTENWKR 78
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E++ L+ L + ++ K +L N++VR IG+R+ LD ++ ++ + E++T+ N G
Sbjct: 79 TQVEVAGLMSLFRRYISKEMKALAARNVRVRFIGDRVRLDAKLVKLMDQLEEETQENDGT 138
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L IA NY RDE++RA K + QD+ +G + VD + +YLDT +PDPDL+IRT G
Sbjct: 139 HLTIALNYGGRDEVARATKRLAQDVAAGKLDPEKVDQETLPRYLDTHVLPDPDLVIRTSG 198
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E R+S+FLLWQ AY+E+ FI WPDF+ E Y RDRRFGG+
Sbjct: 199 EARISNFLLWQSAYAEYEFIDTLWPDFTSEEMGRLCRSYGSRDRRFGGVK 248
>gi|330720187|gb|EGG98574.1| Undecaprenyl pyrophosphate synthetase [gamma proteobacterium
IMCC2047]
Length = 269
Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats.
Identities = 102/236 (43%), Positives = 145/236 (61%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+ P H+ IIMDGN RWA R LP AGH+ G+E ++ A AE+ I LT+FAFS N
Sbjct: 18 EAVPRHVAIIMDGNNRWAKRRSLPSAAGHKAGLESVRSVMRACAELKIDVLTLFAFSSEN 77
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+S L+ L + L++ + KNN ++RVIGNR D I + +AE T N
Sbjct: 78 WRRPEKEVSALMTLFLTALRQEVKKIHKNNFRLRVIGNRSRFSDKIQQGIADAEKLTANN 137
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
G + IA +Y + +I++A +++ D +G + D++ + + + SD+P PDL IR
Sbjct: 138 DGCTVVIAADYGGQWDIAQAAQSLAADACAGKIELSDINEQSLHERICLSDLPMPDLCIR 197
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
TGGE R+S+FLLWQ+AY+E F YWPDF RE F+ A+ + RDRRFG S +
Sbjct: 198 TGGEHRISNFLLWQMAYTELYFTDTYWPDFGREAFYEAVADFQRRDRRFGRTSNES 253
>gi|188996579|ref|YP_001930830.1| undecaprenyl diphosphate synthase [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188931646|gb|ACD66276.1| undecaprenyl diphosphate synthase [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 231
Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats.
Identities = 101/239 (42%), Positives = 145/239 (60%), Gaps = 8/239 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M+ ++ PDH+ IIMDGNGRWA RGL R GHR+G++ + A +VGIK +T+
Sbjct: 1 MIENLFK--IPDHVAIIMDGNGRWAKMRGLDRVYGHREGVKTVERTIKFAKKVGIKYITL 58
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW+RP+ E++ +++L ++ + LK+N+IK+ +G + L D +L +K+A
Sbjct: 59 FAFSTENWQRPIEEVNAIMQLFVEYIHEKLPFLKENDIKLLFMGRKEGLWDSVLEAMKKA 118
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
ED+T+ + L + I NYS + EI A+ I +D YL ++P
Sbjct: 119 EDETKNCSSLTVIIGLNYSGKAEIVDAVNKIL------KSNVEKIDEESFRNYLYLPEIP 172
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRT GEKR+S+FLLWQ+AY+E F WPDF E F AL Y RDRRFG +
Sbjct: 173 DPDLLIRTSGEKRISNFLLWQLAYTELYFTDVLWPDFDEEEFLKALYDYQSRDRRFGRV 231
>gi|282882076|ref|ZP_06290717.1| di-trans,poly-cis-decaprenylcistransferase [Peptoniphilus
lacrimalis 315-B]
gi|281298106|gb|EFA90561.1| di-trans,poly-cis-decaprenylcistransferase [Peptoniphilus
lacrimalis 315-B]
Length = 241
Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats.
Identities = 99/231 (42%), Positives = 151/231 (65%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P HIGIIMDGNGRWA ++ LPR GH+ G + +IV A+ E+G+K+L+++AFS NW
Sbjct: 11 NIPKHIGIIMDGNGRWAKSKNLPRSFGHKAGSDRVIDIVEASYELGVKSLSLYAFSTENW 70
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP EIS+L++LIK +++ + KNN+++ V G+ L + + + A ++T+ N
Sbjct: 71 KRPRDEISKLMELIKYYIRTQLAKINKNNVRINVFGDIEPLPESVKKEILMAVEKTKNND 130
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+NL I NY +DEI RA KNI +D+ G + + D++ + YL + DL+IR
Sbjct: 131 KMNLNICLNYGGQDEILRACKNISKDVFDGKITTEDINKEIFDSYLYSKGQDSLDLLIRP 190
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE R+S+F+LWQ+AY+EF F WPDF++E + A+ Y RDRR+GGL
Sbjct: 191 SGELRVSNFMLWQLAYAEFYFSNILWPDFTKEELYKAIYSYQNRDRRYGGL 241
>gi|224536355|ref|ZP_03676894.1| hypothetical protein BACCELL_01229 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522052|gb|EEF91157.1| hypothetical protein BACCELL_01229 [Bacteroides cellulosilyticus
DSM 14838]
Length = 244
Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats.
Identities = 101/240 (42%), Positives = 142/240 (59%), Gaps = 2/240 (0%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ S P H+ IIMDGNGRWA RG R GH+ G E + I AA +GI+ LT++
Sbjct: 5 EQIDLSRIPQHVAIIMDGNGRWAKQRGHERSYGHQVGAETVHVIAEEAARLGIRYLTLYT 64
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RP E++ L+ L+ +++ + KNNI R+IG+ L ++ L +
Sbjct: 65 FSTENWNRPTDEVAALMSLLFDSIEE--DTFMKNNISFRIIGDIEKLPANVQTRLYNCVE 122
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTG+ L +A +YSSR EI+ A + I ++ + +D L++K+L T +PDP
Sbjct: 123 NTSKNTGMCLVLALSYSSRWEITEASRQIAALVQKRELTPEQIDCDLMSKHLTTHFMPDP 182
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL+IRTGGE RLS++LLWQ AYSE F YWPDF E A+ Y R+RRFG S++
Sbjct: 183 DLLIRTGGEIRLSNYLLWQCAYSELYFCETYWPDFREEELCKAICDYQRRERRFGKTSEQ 242
>gi|90961539|ref|YP_535455.1| undecaprenyl pyrophosphate synthetase [Lactobacillus salivarius
UCC118]
gi|90820733|gb|ABD99372.1| Undecaprenyl pyrophosphate synthetase [Lactobacillus salivarius
UCC118]
Length = 260
Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats.
Identities = 97/242 (40%), Positives = 137/242 (56%), Gaps = 3/242 (1%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P+HI IIMDGNGRWA R LPR AGH++G+E I A+ +G+K LT++AF
Sbjct: 17 KLKRELIPNHIAIIMDGNGRWAKKRHLPRIAGHKQGMETVKNITKVASNLGVKVLTLYAF 76
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP E+ L+ L F L +NN++V V+G L + +A +Q
Sbjct: 77 STENWKRPDKEVDFLMDLPVKFFNTFVPELIENNVRVNVMGYIDMLPKKTQKAVYDAIEQ 136
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT---SDVP 180
T TG+ L A NY R E+ AI++I + + + ++ L T +
Sbjct: 137 TSNCTGMVLNFALNYGGRAELVSAIQSIASKVSENKLEIEKITEKVVDANLMTGKLAPYN 196
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GE+R+S+FLLWQ+AYSEFVF WPD+S E + + RDRRFG L
Sbjct: 197 DPDLLIRTSGEERISNFLLWQLAYSEFVFTDTLWPDYSEEDLLANIYTFQTRDRRFGRLK 256
Query: 241 KK 242
++
Sbjct: 257 EE 258
>gi|99081253|ref|YP_613407.1| undecaprenyl pyrophosphate synthetase [Ruegeria sp. TM1040]
gi|99037533|gb|ABF64145.1| Undecaprenyl pyrophosphate synthetase [Ruegeria sp. TM1040]
Length = 256
Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats.
Identities = 108/231 (46%), Positives = 143/231 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA ARG PR GH G E+V +GIK LTIFAFS NW+R
Sbjct: 26 PKHVAIIMDGNGRWAQARGRPRLFGHHAGARRVREVVECCPSLGIKYLTIFAFSTENWKR 85
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E++ L+ L + ++ K +L N++VR IG+R+ LD ++ ++ E +T N G
Sbjct: 86 TQVEVAGLMSLFRRYISKEMKALAAKNVRVRFIGDRVRLDTKLVQLMDALELETAGNDGT 145
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L IA NY RDE++RA + + QD+ G + DVD + +YLDT +PDPDL+IRT G
Sbjct: 146 HLTIALNYGGRDEVARATQRLAQDVADGRLDPRDVDEETLPRYLDTHVLPDPDLVIRTSG 205
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E R+S+FLLWQ AYSE+ FI WPDFS E + RDRRFG K
Sbjct: 206 EARISNFLLWQSAYSEYEFIDTLWPDFSSEELARLCRNFGNRDRRFGATKK 256
>gi|258511404|ref|YP_003184838.1| undecaprenyl diphosphate synthase [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478130|gb|ACV58449.1| undecaprenyl diphosphate synthase [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 254
Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats.
Identities = 94/230 (40%), Positives = 136/230 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+IMDGNGRWA RGLPR AGH G+ E + A + GI+ +T++AFS NW+R
Sbjct: 25 PRHIGLIMDGNGRWAQQRGLPRIAGHHAGMLAMKEAIRACDDFGIECVTLYAFSTENWKR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L++L + F + L + N++VR IG+ L ++ A T+ NTG+
Sbjct: 85 PAAEVDYLMRLPEQFFRSEIDELVRRNVRVRFIGDTERLPTHTQETVRRAIQCTQHNTGM 144
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ A NY R EI A++ +++ G + + +YLDT+ +P DL+IRT G
Sbjct: 145 IVNFALNYGGRMEIVAAMERYAREVMEGRATVGQLTEATCDRYLDTAGLPPLDLVIRTSG 204
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E RLS+FLLWQ AY+E F WPDF+R+ + A+ Y R RRFG +
Sbjct: 205 EIRLSNFLLWQAAYAELWFTDVLWPDFTRDDLYQAICDYAKRKRRFGAIE 254
>gi|222100167|ref|YP_002534735.1| Undecaprenyl pyrophosphate synthetase [Thermotoga neapolitana DSM
4359]
gi|221572557|gb|ACM23369.1| Undecaprenyl pyrophosphate synthetase [Thermotoga neapolitana DSM
4359]
Length = 233
Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats.
Identities = 100/231 (43%), Positives = 138/231 (59%), Gaps = 2/231 (0%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ IIMDGNGRWA RGLPR GH +G V + V + E+GIK LT ++FS NW
Sbjct: 2 RIPQHVAIIMDGNGRWAKKRGLPRIKGHERGAHVLHNTVKWSLELGIKYLTAYSFSTENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP E+ L+ L + + L++ ++VR++G + L + +L E E++T
Sbjct: 62 KRPKEEVEFLMNLFVQMIDREMDLLRREKVRVRILGRKEGLPESVLRKWNEVEEKTNSFD 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+ L IAFNY R EI A++ I +D+E ++ YL DVPDPDLIIRT
Sbjct: 122 RMTLVIAFNYGGRREILDAVERILRDVEKEKKIV--LNEETFKSYLYLPDVPDPDLIIRT 179
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE RLS+FL+WQ AYSE F + WPDF++ F A+ Y+ R+RRFGGL
Sbjct: 180 SGELRLSNFLIWQSAYSELYFTRKLWPDFTKRDFLRAIESYSRRERRFGGL 230
>gi|126736319|ref|ZP_01752061.1| undecaprenyl diphosphate synthase [Roseobacter sp. CCS2]
gi|126714140|gb|EBA11009.1| undecaprenyl diphosphate synthase [Roseobacter sp. CCS2]
Length = 241
Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats.
Identities = 104/239 (43%), Positives = 152/239 (63%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + + P H+ IIMDGNGRWA RG PR GH G +++ A E+G+K LTI
Sbjct: 1 MPKDADAKTTPGHVAIIMDGNGRWAQQRGRPRLFGHHAGARRVRDVLTACPELGVKYLTI 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW+R SE++ L+ L + +L++ L ++ + VR IG+R+ LDD ++ ++ E
Sbjct: 61 FAFSTENWKRTQSEVAGLMALFRRYLEREAKELHESGVCVRFIGDRIRLDDKLVSLMDEL 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E +T N ++L +A NY RDE++RA K + ++E G + DVD+ +A +LDT +P
Sbjct: 121 ELRTADNDRVHLTVALNYGGRDEVTRAAKRLAYEVEQGRLTHEDVDAETLAGFLDTHVLP 180
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRT GE R+S+FLLWQ AY+E+ F+ WPDF+ F L Y R+RRFG +
Sbjct: 181 DPDLVIRTSGEARISNFLLWQSAYAEYEFVDTLWPDFTAAEFAKVLKSYGTRERRFGAV 239
>gi|24373201|ref|NP_717244.1| undecaprenyl diphosphate synthase [Shewanella oneidensis MR-1]
gi|42559986|sp|Q8EGH1|UPPS_SHEON RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|24347422|gb|AAN54688.1|AE015609_7 undecaprenyl diphosphate synthase [Shewanella oneidensis MR-1]
Length = 275
Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats.
Identities = 93/241 (38%), Positives = 149/241 (61%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ ++ S P H+ IIMDGNGRWA +G PR GH+ G++ V+AA+++GI++LT+F
Sbjct: 28 LPELVKQSLPKHVAIIMDGNGRWAQTQGKPRVMGHKAGVKAVRRAVSAASQLGIQSLTLF 87
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP E+S L++L + L++ L KN +K+ +IG+ + ++ AE
Sbjct: 88 AFSSENWRRPDKEVSLLMELFFTVLQREIKLLDKNQVKLNIIGDISRFSARLQKQIRAAE 147
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T N+GL L +A NY R +I +A + + + +E+G + S ++++L + +
Sbjct: 148 EKTAGNSGLILNVAANYGGRWDILQAAQKLAEKVETGEMTSSQFTEEALSEHLCMQNQSE 207
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DLIIRTGG+ R+S+F+LWQ AY+E VF+ WPDF + F A+ + R RRFG
Sbjct: 208 VDLIIRTGGDYRISNFVLWQAAYAELVFLDTLWPDFDEQAFHEAIATFANRQRRFGLTGS 267
Query: 242 K 242
+
Sbjct: 268 Q 268
>gi|259046788|ref|ZP_05737189.1| di-trans,poly-cis-decaprenylcistransferase [Granulicatella adiacens
ATCC 49175]
gi|259036556|gb|EEW37811.1| di-trans,poly-cis-decaprenylcistransferase [Granulicatella adiacens
ATCC 49175]
Length = 260
Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats.
Identities = 101/242 (41%), Positives = 150/242 (61%), Gaps = 3/242 (1%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ S+ S + P HI +IMDGNGRWA R LPR AGH++G+ I AA ++G+K +T++
Sbjct: 19 IISLDSKNIPKHIAVIMDGNGRWAKKRNLPRIAGHKEGMSTVKRIAIAADDLGVKAMTLY 78
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E+S L+KL F L++ N+K+++IG L + ++ +A
Sbjct: 79 AFSTENWKRPTEEVSFLMKLPGDFFGTFMPELQERNMKIQLIGFIDELPESTKNIVLKAV 138
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS---D 178
+ T+ NTG+ L A NY SR EI A K I ++ G + ++D ++ +L T D
Sbjct: 139 EDTKNNTGMVLTFALNYGSRAEIIEATKAISTLVKQGELEIENIDDAVFESHLQTHFLGD 198
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+ +PDL+IRT GE RLS+FLLWQ+AYSE+ F +WP+FS + A+ Y R RR+GG
Sbjct: 199 LQNPDLMIRTSGEVRLSNFLLWQLAYSEYYFTDIFWPEFSEKDLHKAIQTYQNRHRRYGG 258
Query: 239 LS 240
L+
Sbjct: 259 LA 260
>gi|114764270|ref|ZP_01443498.1| undecaprenyl diphosphate synthase [Pelagibaca bermudensis HTCC2601]
gi|114543218|gb|EAU46235.1| undecaprenyl diphosphate synthase [Roseovarius sp. HTCC2601]
Length = 241
Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats.
Identities = 108/241 (44%), Positives = 153/241 (63%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + + P H+ IIMDGNGRWA RG PR GH G + EIV A ++G+ +TI
Sbjct: 1 MPKPIRDGAGPRHVAIIMDGNGRWAQRRGRPRLFGHHAGAKRVREIVEACPDLGVGYVTI 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW+R SE++ L+ L + ++ K SL N++VR IG+R+ LD ++ ++ E
Sbjct: 61 FAFSTENWKRTQSEVAGLMSLFRRYITKEARSLLGENVRVRFIGDRVRLDSKLVTLMDEL 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E T TG+NL IA NY RDE++RA K + +D+ +G + VD + KYLDT +P
Sbjct: 121 EQLTAGCTGVNLTIAINYGGRDEVARATKRLAEDVAAGRLDPASVDEETLPKYLDTCVLP 180
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GE R+S+FLLWQ AY+E+ F+ WPDFS + F ++ Y R+RR+GG+
Sbjct: 181 DPDLVIRTSGEARISNFLLWQSAYAEYEFVDTLWPDFSADEFGSLVSAYGSRERRYGGVK 240
Query: 241 K 241
Sbjct: 241 A 241
>gi|116617797|ref|YP_818168.1| undecaprenyl pyrophosphate synthetase [Leuconostoc mesenteroides
subsp. mesenteroides ATCC 8293]
gi|116096644|gb|ABJ61795.1| Undecaprenyl pyrophosphate synthetase [Leuconostoc mesenteroides
subsp. mesenteroides ATCC 8293]
Length = 259
Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats.
Identities = 99/238 (41%), Positives = 140/238 (58%), Gaps = 3/238 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P+HI IIMDGNGRWA R +PR AGH+ G+ I +AA+++G+K LT++ FS NW
Sbjct: 18 KIPEHIAIIMDGNGRWAKKRLMPRAAGHKAGMNTVKRIASAASDMGVKVLTLYVFSTENW 77
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E++ L++L +F L KNNI+V V GN +L + A ++T T
Sbjct: 78 SRPNDEVNFLMQLPIAFFNDFVPDLIKNNIRVSVTGNVDALPAATQDAVNRAIEETASGT 137
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD---PDLI 185
G+ L A NY + EI A K I +++ G + D++S + A L T+ + D PDL+
Sbjct: 138 GMVLNFAMNYGGQIEIVDATKKIAEEVAKGHLSPDDINSEVFAAALQTAHLGDLATPDLM 197
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
IRT GE RLS+FL +Q AY+E F WPD+S + A+ Y RDRRFGGL+ +
Sbjct: 198 IRTSGELRLSNFLPYQAAYAELYFTDVLWPDYSSDDLMTAIQSYTKRDRRFGGLNDES 255
>gi|307129825|ref|YP_003881841.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) [Dickeya
dadantii 3937]
gi|306527354|gb|ADM97284.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) [Dickeya
dadantii 3937]
Length = 253
Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats.
Identities = 89/230 (38%), Positives = 138/230 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG R GH+ G++ ++ A ++ LT++AFS NW R
Sbjct: 17 PRHVAIIMDGNGRWAKQRGKLRIFGHQAGVKSVRRAISYAVGQNLEALTLYAFSSENWNR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L L +L K+N+++RVIG+ + +++ +E T NTGL
Sbjct: 77 PAQEVSALMQLFVRVLDSEVKNLHKHNVRLRVIGDISRFSSRLQELIRRSEAVTENNTGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I ++ I + ++ G + +D S +++Y+ +D+ DL+IRT G
Sbjct: 137 TLNIAANYGGRWDIIHGVRKIAEQVQEGLLRPDTIDESTLSRYMCLNDLAPVDLLIRTSG 196
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E R+S+FLLWQ+AY+E F WPDF + F A++ + R+RRFGG +
Sbjct: 197 EHRISNFLLWQIAYAELYFTDVLWPDFDEQTFEGAIHAFTQRERRFGGTT 246
>gi|219847471|ref|YP_002461904.1| undecaprenyl diphosphate synthase [Chloroflexus aggregans DSM 9485]
gi|219541730|gb|ACL23468.1| undecaprenyl diphosphate synthase [Chloroflexus aggregans DSM 9485]
Length = 241
Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats.
Identities = 103/234 (44%), Positives = 143/234 (61%), Gaps = 4/234 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+ P HI +IMDGNGRWA RGLPR AGHR G E IV A +G++ LT++AFS N
Sbjct: 10 TKIPQHIAVIMDGNGRWAQQRGLPRLAGHRAGTENIRPIVTECARLGVRVLTLYAFSTEN 69
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP E+ L++++ F+ + +L N+ +R +G L + +K A D TR N
Sbjct: 70 WNRPSVEVQGLMQILSEFIDREIRNLHAQNVHLRHLGRLDGLSPHLREKVKYAIDLTRNN 129
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
TGL L IAFNY R +I A++ I + + + + +I+ +L T +PDPD+IIR
Sbjct: 130 TGLILAIAFNYGGRADIVDAVRAIV----ASGIPADQITDEVISAHLSTHGLPDPDMIIR 185
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
T GE+RLS+FL+WQ AYSE+ F P +WPDF E A+ Y R+RRFGGL +
Sbjct: 186 TSGERRLSNFLIWQSAYSEYWFTPVFWPDFRPEHLHQAILDYGRRERRFGGLPE 239
>gi|319638836|ref|ZP_07993594.1| undecaprenyl pyrophosphate synthetase [Neisseria mucosa C102]
gi|317399740|gb|EFV80403.1| undecaprenyl pyrophosphate synthetase [Neisseria mucosa C102]
Length = 248
Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats.
Identities = 99/238 (41%), Positives = 146/238 (61%), Gaps = 6/238 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ S+ P HI +IMDGNGRWA R LPR GH++G++ +V AE+G++ LT+FAFS
Sbjct: 9 LEHSAIPRHIAVIMDGNGRWAKKRFLPRVMGHKRGLDALENMVKHCAELGVRYLTVFAFS 68
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRRP E+S L+ L L+K L NN++++VIG+R + +IL ++ AE T
Sbjct: 69 TENWRRPEEEVSFLMGLFLQALQKQVRRLHDNNMRLKVIGSRERFNAEILKGIEAAEALT 128
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NTGL L IA +Y R +I +A + + + ++ +++YL D P+PDL
Sbjct: 129 ANNTGLTLSIAADYGGRWDILQAANQLIAEGVT------EITEEALSRYLMLGDAPEPDL 182
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTGGE R+S+FLLWQ+AY+E F WPDF+ + A+ + R+RRFG S++
Sbjct: 183 FIRTGGETRISNFLLWQMAYAELYFTDTLWPDFNEKSLNEAIVSFQKRERRFGRTSEQ 240
>gi|323464628|gb|ADX76781.1| undecaprenyl diphosphate synthase [Staphylococcus pseudintermedius
ED99]
Length = 253
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 96/239 (40%), Positives = 143/239 (59%), Gaps = 1/239 (0%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ ++ + P+HI IIMDGNGRWA R +PR GH +G++ I AA+++G+K LT++
Sbjct: 15 IEALDLHNIPEHIAIIMDGNGRWAKQRKMPRIKGHYQGMQTIKTITRAASDLGVKYLTLY 74
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E++ ++ L +FL L + N++V +G L + + ++EA+
Sbjct: 75 AFSTENWSRPDEEVNYIMGLPVNFLNTFLPELIEKNVRVETVGFIDELPEKTIQAIEEAK 134
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGS-VCSHDVDSSLIAKYLDTSDVP 180
+T NTGL L A NY R EI I+ + +++ S + KYL T D P
Sbjct: 135 IKTADNTGLTLIFAINYGGRAEIVHGIQTLMKEMRHASDQDIDALTEQHFQKYLMTRDYP 194
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DP+L+IRT GE+R+S+FL+WQ++YSEF+F + WPDF E + Y R RRFGGL
Sbjct: 195 DPELLIRTSGEQRVSNFLIWQLSYSEFIFNSKMWPDFDEEELKACIKTYQSRQRRFGGL 253
>gi|104774220|ref|YP_619200.1| undecaprenyl pyrophosphate synthetase [Lactobacillus delbrueckii
subsp. bulgaricus ATCC 11842]
gi|116514308|ref|YP_813214.1| undecaprenyl pyrophosphate synthase [Lactobacillus delbrueckii
subsp. bulgaricus ATCC BAA-365]
gi|103423301|emb|CAI98142.1| Undecaprenyl pyrophosphate synthetase [Lactobacillus delbrueckii
subsp. bulgaricus ATCC 11842]
gi|116093623|gb|ABJ58776.1| Undecaprenyl pyrophosphate synthetase [Lactobacillus delbrueckii
subsp. bulgaricus ATCC BAA-365]
gi|325126005|gb|ADY85335.1| Undecaprenyl pyrophosphate synthetase [Lactobacillus delbrueckii
subsp. bulgaricus 2038]
Length = 243
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 100/240 (41%), Positives = 144/240 (60%), Gaps = 3/240 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M + +H+ IIMDGNGRWA R +PR GH+ G++ +I AA E+GIK LT++AFS
Sbjct: 1 MDKNKQLNHLAIIMDGNGRWAKKRKMPRFMGHKAGMDNVEKIALAADELGIKVLTLYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP E++ L+KL F K L+ +N+KV ++G +L + V++ A +T
Sbjct: 61 TENWARPKDEVNYLMKLPVKFFDKFMPCLQAHNVKVNIMGYLDALPESTREVVERAMAET 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT---SDVPD 181
NTGL L AFNY SR EI A++ + ++ SG + ++ +++ L T + D
Sbjct: 121 AANTGLVLNFAFNYGSRKEIVSAVQALAKEAASGEITPEEITEDMVSAKLMTAKFAPYSD 180
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL+IRT GE+R+S+FLLWQ+AYSE F + WPDF + Y RDRRFG L +
Sbjct: 181 PDLLIRTSGEQRISNFLLWQIAYSELAFTDKAWPDFDENDLAEMVKIYQHRDRRFGKLDE 240
>gi|78222468|ref|YP_384215.1| undecaprenyl pyrophosphate synthase [Geobacter metallireducens
GS-15]
gi|78193723|gb|ABB31490.1| Undecaprenyl pyrophosphate synthetase [Geobacter metallireducens
GS-15]
Length = 246
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 102/238 (42%), Positives = 145/238 (60%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P H+ +IMDGNGRWA R L R GH+KG+E IV + +GIK LT+FAFS
Sbjct: 4 LSHDKLPRHLAVIMDGNGRWAQERMLKRIIGHQKGVETVRVIVEECSRLGIKYLTLFAFS 63
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP +E+ L+ L+K +++ + +NI+ VIG R L D+ ++EA D+T
Sbjct: 64 AENWLRPKTEVKALMSLLKKYIRVETARMLDSNIRFNVIGAREELPPDVNQAVQEAIDRT 123
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NTG+ L +A +Y +R EI A + I D+ SG + D+D + YL TS +PDPD
Sbjct: 124 ARNTGMVLTLALSYGARQEILLAAERIAADLSSGHLSLGDIDEKTFSSYLFTSGMPDPDF 183
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IRT GE R+S+FLLWQ+AY+E F WP+F+ + AL+ Y R+RRFG S +
Sbjct: 184 LIRTSGEMRISNFLLWQLAYTELYFTEVNWPEFTAKELHRALHDYQSRERRFGRTSAQ 241
>gi|238918779|ref|YP_002932293.1| di-trans,poly-cis-decaprenylcistransferase, [Edwardsiella ictaluri
93-146]
gi|238868347|gb|ACR68058.1| di-trans,poly-cis-decaprenylcistransferase, putative [Edwardsiella
ictaluri 93-146]
Length = 253
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 92/233 (39%), Positives = 135/233 (57%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+S P H+ IIMDGNGRWA +G R GH+ G++ V A GI+ LT++AFS N
Sbjct: 13 ASVPRHVAIIMDGNGRWAKHQGKMRVFGHKAGVKSVRCAVRFAVTRGIRALTLYAFSSEN 72
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP E+S L++L L L K+ ++++VIG+ + ++ +E T N
Sbjct: 73 WNRPQQEVSALMELFVRALDSEVKRLHKHQVRLKVIGDISRFSPRLQERIRRSEQMTAEN 132
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
TGL L IA NY R +I + +K + + + G++ + S++ + + + DL+IR
Sbjct: 133 TGLTLNIAANYGGRWDIVQGVKTLAEQVRQGTLLPEAITESMLGEQVCLHEQDSVDLVIR 192
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
TGGE R+S+FLLWQ+AYSEF F WPDF F ALN + R+RRFGG +
Sbjct: 193 TGGEHRVSNFLLWQIAYSEFYFTDVLWPDFDETTFEGALNAFAQRERRFGGTT 245
>gi|212636273|ref|YP_002312798.1| Di-trans-poly-cis-decaprenylcistransferase [Shewanella
piezotolerans WP3]
gi|212557757|gb|ACJ30211.1| Di-trans-poly-cis-decaprenylcistransferase [Shewanella
piezotolerans WP3]
Length = 266
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 89/241 (36%), Positives = 146/241 (60%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+++++ S P H+ IIMDGNGRWA A+G PR GH+ G++ V+ A +G+++LT+F
Sbjct: 19 LSALVKQSIPKHVAIIMDGNGRWAQAQGKPRVVGHKAGVKAVRRAVSTARTLGVESLTLF 78
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP E+S L++L + L++ L KN++++ +IG+ + + A+
Sbjct: 79 AFSSENWRRPDKEVSLLMELFFTVLQRELKLLDKNDVRLNIIGDISRFSSRLQKQIATAQ 138
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T N GL L +A NY R +I +A + + +E+G + S + ++L + +
Sbjct: 139 EKTANNCGLVLNVAANYGGRWDIMQAAQKLAAKVEAGEMSSEQFTEEALNEHLCMHNQSE 198
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRTGG+ R+S+F+LWQ AY+E VF WPDF + F A+ ++ R RRFG
Sbjct: 199 VDLMIRTGGDYRISNFVLWQAAYAELVFTDTLWPDFDEDAFKDAIVKFASRQRRFGLTGT 258
Query: 242 K 242
+
Sbjct: 259 Q 259
>gi|189464291|ref|ZP_03013076.1| hypothetical protein BACINT_00632 [Bacteroides intestinalis DSM
17393]
gi|189438081|gb|EDV07066.1| hypothetical protein BACINT_00632 [Bacteroides intestinalis DSM
17393]
Length = 244
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 101/240 (42%), Positives = 143/240 (59%), Gaps = 2/240 (0%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ S P H+ IIMDGNGRWA RG R GH+ G E + I AA +GI+ LT++
Sbjct: 5 EQIDLSRIPQHVAIIMDGNGRWAKQRGHERSYGHQIGAETVHVIAEEAARLGIRYLTLYT 64
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RP E++ L+ L+ +++ + KNNI R+IG+ L ++ L +
Sbjct: 65 FSTENWNRPTDEVAALMSLLFDSIEE--DTFMKNNISFRIIGDIEKLPANVQTRLYNCVE 122
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTG+ L +A +YSSR EI+ A + I ++ G + ++ L++K+L T +PDP
Sbjct: 123 HTSKNTGMCLVLALSYSSRWEITEASRQIAVLVQKGELTPEQINCDLMSKHLTTGFMPDP 182
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL+IRTGGE RLS++LLWQ AYSE F YWPDF E A+ Y R+RRFG S++
Sbjct: 183 DLLIRTGGEIRLSNYLLWQCAYSELYFCETYWPDFREEELRKAICDYQRRERRFGKTSEQ 242
>gi|110679818|ref|YP_682825.1| undecaprenyl diphosphate synthase [Roseobacter denitrificans OCh
114]
gi|109455934|gb|ABG32139.1| undecaprenyl diphosphate synthase [Roseobacter denitrificans OCh
114]
Length = 258
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 110/231 (47%), Positives = 145/231 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG PR GH G EIV A VG+K LTIFAFS NW+R
Sbjct: 28 PRHVAIIMDGNGRWATQRGRPRLFGHHAGARRVREIVEACPSVGVKYLTIFAFSTENWKR 87
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
+E++ L+ L K ++ + L ++VR IG+R LD + ++ E E+ T NT +
Sbjct: 88 TQAEVAGLMSLFKRYITRETRELNTYGVRVRFIGDRTRLDATLARLMTELENATAGNTNM 147
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L IA NY RDE++RA K + QD+ +G + DVD + KYLDT +PDPDL+IRT G
Sbjct: 148 HLTIAINYGGRDEVARATKRLAQDVANGMLKPEDVDEETLPKYLDTYVLPDPDLVIRTSG 207
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E R+S+FLLWQ AYSE+ FI WPDF+R F Y R+RR+GG+
Sbjct: 208 EARISNFLLWQSAYSEYEFIDTLWPDFTRSEFEEVCTAYGGRERRYGGVKA 258
>gi|268317512|ref|YP_003291231.1| undecaprenyl diphosphate synthase [Rhodothermus marinus DSM 4252]
gi|262335046|gb|ACY48843.1| undecaprenyl diphosphate synthase [Rhodothermus marinus DSM 4252]
Length = 273
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 92/232 (39%), Positives = 141/232 (60%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
P HI IIMDGNGRWA +G R GH +G+E +I A ++GI LT++ FS N
Sbjct: 33 GPLPVHIAIIMDGNGRWAQQQGKRRVVGHYEGVESVRDITEACVQLGIPYLTLYTFSTEN 92
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W+RP SE++ L++L+ +++ L +N +++RV+G L L++A +T N
Sbjct: 93 WQRPASEVNALMQLLVKTIRREKTRLLENGVQLRVLGEMAQLPPVCQAELEQAVQETARN 152
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L L +A +YS R EI +A++ + + ++ G++ D+D + A L + +PDPDL+IR
Sbjct: 153 DRLVLTLALSYSGRWEILQAVRTLARRVQEGALRPEDIDEATFAAALPGAGLPDPDLLIR 212
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
TGGE R+S+FLLWQ+AY+E YWP F R + A+ Y R+RRFG +
Sbjct: 213 TGGEFRVSNFLLWQIAYTELYITDVYWPAFRRRQLYEAIRSYQNRERRFGRI 264
>gi|260494282|ref|ZP_05814413.1| di-trans,poly-cis-decaprenylcistransferase [Fusobacterium sp.
3_1_33]
gi|260198428|gb|EEW95944.1| di-trans,poly-cis-decaprenylcistransferase [Fusobacterium sp.
3_1_33]
Length = 230
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 99/235 (42%), Positives = 143/235 (60%), Gaps = 7/235 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M + P+HI IIMDGNGRWA RGL R GH +G + + + E+G+K LT++AFS
Sbjct: 1 MKKNIPNHIAIIMDGNGRWAKKRGLARSFGHMEGAKTLRKALEYLTEIGVKYLTVYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+S L+KL ++K ++ KN I+ V G + ++ + + +++ E++T+
Sbjct: 61 ENWNRPQDEVSTLMKLFLKYIKSERKNMMKNRIRFFVSGRKNNVPEKLQKEIEKLEEETK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N + L IAFNY SR EI A+ I +D + ++ +KYL +D PDPDL+
Sbjct: 121 NNDRITLNIAFNYGSRAEIVDAVNRIIKDGK------ENITEEDFSKYLY-NDFPDPDLV 173
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IRT GE R+S+FLLWQ+AYSEF WPDF + A+ YN R+RRFGG+
Sbjct: 174 IRTSGEMRISNFLLWQIAYSEFYITDTLWPDFDEKEIDKAIESYNQRERRFGGVK 228
>gi|332519956|ref|ZP_08396420.1| undecaprenyl diphosphate synthase [Lacinutrix algicola 5H-3-7-4]
gi|332044515|gb|EGI80709.1| undecaprenyl diphosphate synthase [Lacinutrix algicola 5H-3-7-4]
Length = 227
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 100/225 (44%), Positives = 149/225 (66%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA +GL R GH G + E V AA E+GI+NLT++AFS NW RP E+
Sbjct: 1 MDGNGRWAKQKGLIRAIGHENGTKSVRETVEAATEIGIENLTLYAFSTENWNRPKLEVDT 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+KL+ S LKK +L++NNI + IG+ +L +L LKE ++T+ NT + L +A +
Sbjct: 61 LMKLLVSSLKKEISTLQENNITLNAIGDLHNLPKKVLKELKEVIEKTKNNTRMTLTLALS 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y SR E+ AIK I +++ + + ++D S+I ++L T ++PD DL+IRT GE+R+S+F
Sbjct: 121 YGSRAEMLNAIKEISLKVKNNIISAENIDESIINEHLYTQNLPDVDLLIRTSGEQRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
LLWQ+AY+E F WPDF+++ A+ +Y R+RRFG S++
Sbjct: 181 LLWQIAYAELYFTNSLWPDFTKQHLCDAIIEYQKRERRFGKTSEQ 225
>gi|149907549|ref|ZP_01896296.1| undecaprenyl diphosphate synthase [Moritella sp. PE36]
gi|149809219|gb|EDM69148.1| undecaprenyl diphosphate synthase [Moritella sp. PE36]
Length = 259
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 96/241 (39%), Positives = 151/241 (62%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ ++++ S P H+ IIMDGNGRWA RG R GH +G++ ++V++A +GI++LT+F
Sbjct: 10 LETLVNDSKPKHVAIIMDGNGRWAQQRGKMRVKGHHEGVKSVRQVVSSALAIGIESLTLF 69
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP +E+S L+KL + L + L KN I++++IG+ + I + EAE
Sbjct: 70 AFSSENWRRPEAEVSMLMKLFMTVLTREVKKLHKNQIRLKIIGDISAFSPAIQTKIAEAE 129
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T NT L L IA NY + +I+ A K I +++G + +D ++ +++ ++ P
Sbjct: 130 ALTCNNTKLTLNIAANYGGQSDIANAAKQIAIAVKTGEISLDQIDDKMLGQHIAMAEQPA 189
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRTGG+ R+S+FLLWQ+AY+E F WPDF F A+ + R+RRFGG +
Sbjct: 190 VDLMIRTGGDHRISNFLLWQLAYAELYFTDTLWPDFDNIAFEDAIFNFVNRERRFGGTGE 249
Query: 242 K 242
+
Sbjct: 250 Q 250
>gi|255283878|ref|ZP_05348433.1| di-trans,poly-cis-decaprenylcistransferase [Bryantella
formatexigens DSM 14469]
gi|255265599|gb|EET58804.1| di-trans,poly-cis-decaprenylcistransferase [Bryantella
formatexigens DSM 14469]
Length = 241
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 108/230 (46%), Positives = 152/230 (66%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ II+DGNGRWA ++G+PR GH +G + I A +GIK LT++ FS NW+
Sbjct: 8 IPRHVAIILDGNGRWAKSKGMPRNYGHSRGAKNLEVICEDAWNIGIKYLTVYLFSTENWK 67
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ L++L +S+ K + +KNN+KVRV+G+ +L +D+ L+ + ++ NTG
Sbjct: 68 RSPEEVDGLMRLFRSYTKTCIKTAQKNNMKVRVLGDPTALAEDLQESLRNLVESSKNNTG 127
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
LN IA NY SRDEI RAI+ I D G V D+ L A YLDT +VPDPDL+IRT
Sbjct: 128 LNFQIAINYGSRDEIVRAIRRISADCVDGKVKPEDITEDLFAGYLDTREVPDPDLLIRTS 187
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE RLS++L+WQ+AYSEF F WP F++E + A+ +YN R+RR+GG+
Sbjct: 188 GELRLSNYLMWQLAYSEFYFTDVPWPAFTKENLWQAIEKYNQRERRYGGV 237
>gi|167624891|ref|YP_001675185.1| undecaprenyl diphosphate synthase [Shewanella halifaxensis HAW-EB4]
gi|167354913|gb|ABZ77526.1| undecaprenyl diphosphate synthase [Shewanella halifaxensis HAW-EB4]
Length = 266
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 90/241 (37%), Positives = 144/241 (59%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
++ ++ S P H+ IIMDGNGRWA A+G PR GH+ G++ V+ A +G+++LT+F
Sbjct: 19 ISDLVKQSIPKHVAIIMDGNGRWAQAQGKPRVLGHKAGVKAVRRAVSTARNLGVESLTLF 78
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP E+S L++L + L++ L KN +++ +IG+ + + AE
Sbjct: 79 AFSSENWRRPDKEVSLLMELFFTVLQRELKLLHKNGVRLNIIGDISRFSPRLQKQIAAAE 138
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T N L L +A NY R +I +A + + +ESG + S ++++L + +
Sbjct: 139 EKTADNKDLVLNVAANYGGRWDILQAAQKMAVKVESGEMSSTQFTEEALSEHLCMQNQAE 198
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRTGG+ R+S+F+LWQ AY+E VF WPDF+ + F A+ + R RRFG
Sbjct: 199 VDLMIRTGGDYRISNFVLWQAAYAELVFTDTLWPDFNEDAFKDAIAIFANRQRRFGLTGT 258
Query: 242 K 242
+
Sbjct: 259 Q 259
>gi|62738380|pdb|1X08|A Chain A, Crystal Structure Of D26a Mutant Upps In Complex With Mg,
Ipp And Fspp
gi|62738381|pdb|1X09|A Chain A, Crystal Structure Of The D26a Mutant Upps In Complex With
Magnesium And Isopentenyl Pyrophosphate
Length = 253
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 90/239 (37%), Positives = 141/239 (58%), Gaps = 4/239 (1%)
Query: 6 MSSSPP----DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+S P H+ IIM GNGRWA +G R GH+ G + V+ AA GI+ LT++
Sbjct: 9 LSEKLPAHGCRHVAIIMAGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY 68
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+S L++L L SL ++N+++R+IG+ + + ++++E
Sbjct: 69 AFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSE 128
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T NTGL L IA NY R +I + ++ + + ++ G++ +D ++ +++ ++
Sbjct: 129 ALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAP 188
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRTGGE R+S+FLLWQ+AY+E F WPDF + F ALN + R+RRFGG
Sbjct: 189 VDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGGTE 247
>gi|300114872|ref|YP_003761447.1| undecaprenyl diphosphate synthase [Nitrosococcus watsonii C-113]
gi|299540809|gb|ADJ29126.1| undecaprenyl diphosphate synthase [Nitrosococcus watsonii C-113]
Length = 252
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 94/237 (39%), Positives = 144/237 (60%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ P H+ IIMDGNGRWA R PR GHR G+E ++ A A+ GI+ LT+FAFS
Sbjct: 9 QPTKIPRHVAIIMDGNGRWAKQRNRPRFYGHRAGVEAVEGVLRACADTGIRVLTLFAFSS 68
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NWRRP E+ L++L+ S + +++ N+ +R+IG+R + + + +AE T
Sbjct: 69 ENWRRPSQEVQLLMELLASAVSNRLQQIQEQNVCLRIIGDRSRFPEALQAEMAKAEALTA 128
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N G+ L +A NY R +I++A + + +E G + + + A +L + +P+PDL
Sbjct: 129 QNDGITLVVAANYGGRWDITQAARQVAAKVEDGQIAVDSITPEVFAAHLSLAGLPEPDLF 188
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTGGE+R+S+FLLWQ+AY+EF F WPDF+ F A+ + R+RRFG S++
Sbjct: 189 IRTGGEQRVSNFLLWQLAYTEFYFTDILWPDFNEAAFATAIKTFVRRERRFGQTSEQ 245
>gi|225155897|ref|ZP_03724382.1| Di-trans,poly-cis-decaprenylcistransferase [Opitutaceae bacterium
TAV2]
gi|224803350|gb|EEG21588.1| Di-trans,poly-cis-decaprenylcistransferase [Opitutaceae bacterium
TAV2]
Length = 268
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 101/240 (42%), Positives = 145/240 (60%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ +PP H+ IIMDGNGRWA RGLPR GHR+G + + A GI+ LT++AF
Sbjct: 17 TLSPPAPPVHVAIIMDGNGRWARQRGLPRLEGHRRGADAVRAAIEGAQAQGIRYLTLYAF 76
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP E+ L+ L++ FLK+ +L KN I++R IG +L + L A +
Sbjct: 77 SSENWKRPQDEVGGLMNLLEHFLKRETKTLVKNRIRLRTIGRTDALPPPVRAQLAAAIEA 136
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T T L +A NY SR E++ ++ I D +G++ + IA LDT+D+PDPD
Sbjct: 137 TAPFTEHTLILALNYGSRIELTDTVRRIAVDAAAGTLTPDAITWDAIAARLDTADIPDPD 196
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
L+IRT GE R+S+FLL Q AY+EF+F P WPDF A+ +Y+ R+RRFG ++
Sbjct: 197 LVIRTSGEMRISNFLLLQAAYAEFIFTPVLWPDFRETDLAAAVAEYHRRERRFGCTGEQA 256
>gi|255067011|ref|ZP_05318866.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria sicca ATCC
29256]
gi|255048836|gb|EET44300.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria sicca ATCC
29256]
Length = 248
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 99/238 (41%), Positives = 145/238 (60%), Gaps = 6/238 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ +S P HI +IMDGNGRWA R LPR GH++G++ +V A++G++ LT+FAFS
Sbjct: 9 LEHTSVPKHIAVIMDGNGRWAKKRFLPRVMGHKRGLDALENMVKHCAKLGVQYLTVFAFS 68
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRRP E+S L+ L L+K L +NN++++V+G+R + IL ++EAE T
Sbjct: 69 TENWRRPEDEVSFLMGLFLQALQKQVRRLHENNMRLKVLGSRERFNRQILQGIEEAEALT 128
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NTGL L IA +Y R +I +A + + ++ +AK+L D P+PDL
Sbjct: 129 ANNTGLTLSIAADYGGRWDILQAANKLIAEGV------SEITEDALAKHLMLGDAPEPDL 182
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTGGE R+S+FLLWQ+AY+E F WPDF + A+ + R+RRFG S++
Sbjct: 183 FIRTGGETRISNFLLWQMAYAELYFTDTLWPDFDSKALDDAVASFQKRERRFGRTSEQ 240
>gi|302346064|ref|YP_003814417.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella
melaninogenica ATCC 25845]
gi|302150057|gb|ADK96319.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella
melaninogenica ATCC 25845]
Length = 250
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 94/245 (38%), Positives = 147/245 (60%), Gaps = 5/245 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + + P HI I MDGNGRWA R PR GH+ G++ I + +G+K LT+
Sbjct: 1 MAEELDMTRIPQHIAITMDGNGRWATERNKPRSYGHQAGVDTVRRITSECVRLGVKFLTL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW RP EI+ L+ L+ + L+ KNN++ RVIG+ L +++ L+E
Sbjct: 61 YTFSTENWNRPTDEIAALMGLVLTSLEDEI--FMKNNVRFRVIGDMARLPEEVQKKLRET 118
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSV---CSHDVDSSLIAKYLDTS 177
E+ T N+ + + +A +YS+R EI++A++ I + ++ S + +I+++L+T+
Sbjct: 119 EEHTAKNSAMTMVVALSYSARWEIAKAMREIVAEHQANSSEPLRPETITEEVISEHLETN 178
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+PDPDL+IRTGGE R+S++LLWQ+AYSE F YWPDF + A+ + R RRFG
Sbjct: 179 FMPDPDLLIRTGGELRISNYLLWQIAYSELYFCDTYWPDFDEQDLQKAIASFQSRQRRFG 238
Query: 238 GLSKK 242
K+
Sbjct: 239 KTEKQ 243
>gi|312898664|ref|ZP_07758054.1| di-trans,poly-cis-decaprenylcistransferase [Megasphaera
micronuciformis F0359]
gi|310620583|gb|EFQ04153.1| di-trans,poly-cis-decaprenylcistransferase [Megasphaera
micronuciformis F0359]
Length = 259
Score = 289 bits (739), Expect = 3e-76, Method: Composition-based stats.
Identities = 99/239 (41%), Positives = 154/239 (64%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ + P H+ IIMDGNGRWA RG+PR AGH+ G + +I+ AA E+G+K LT++AF
Sbjct: 21 TLDMTRVPHHVAIIMDGNGRWAKRRGMPRRAGHKAGADTLKQIIVAADELGVKVLTVYAF 80
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP E+S ++ L+ ++LKK L N+++R IG+R L D+ + AE
Sbjct: 81 STENWKRPEEEVSYIMNLMLTYLKKNLADLDAKNVQLRFIGDRTRLSKDLQELFNTAETS 140
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
N+GL + +A NY R EI+ A+K+I +D+E+ + + + LI+ YL T+ + D
Sbjct: 141 MHKNSGLIVNVAVNYGGRGEIATAVKSIVKDVENKKIDASQISEELISTYLYTAPENEVD 200
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IR G + R+S++LLWQ+AY+EF + WPDF+++ A+ Y RDRRFGGL ++
Sbjct: 201 LLIRPGADLRISNYLLWQIAYAEFWYTDLCWPDFTKDTLIEAIKSYQGRDRRFGGLHEE 259
>gi|113970972|ref|YP_734765.1| undecaprenyl pyrophosphate synthetase [Shewanella sp. MR-4]
gi|117921252|ref|YP_870444.1| undecaprenyl pyrophosphate synthetase [Shewanella sp. ANA-3]
gi|113885656|gb|ABI39708.1| Undecaprenyl pyrophosphate synthetase [Shewanella sp. MR-4]
gi|117613584|gb|ABK49038.1| Undecaprenyl pyrophosphate synthetase [Shewanella sp. ANA-3]
Length = 275
Score = 289 bits (739), Expect = 3e-76, Method: Composition-based stats.
Identities = 91/241 (37%), Positives = 149/241 (61%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ ++ S P H+ IIMDGNGRWA +G PR GH+ G++ V+AA+++GI++LT+F
Sbjct: 28 LPELVKQSLPKHVAIIMDGNGRWAQTQGKPRVMGHKAGVKAVRRAVSAASQLGIQSLTLF 87
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP E+S L++L + L++ L KN +++ +IG+ + ++ AE
Sbjct: 88 AFSSENWRRPDKEVSLLMELFFTVLQREIKLLDKNQVRLNIIGDISRFSARLQKQIRAAE 147
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T N+GL L +A NY R +I +A + + + +E+G + S ++++L + +
Sbjct: 148 EKTAGNSGLILNVAANYGGRWDILQAAQKLAEKVENGEMTSSQFTEEALSEHLCMQNQSE 207
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRTGG+ R+S+F+LWQ AY+E VF+ WPDF + F A+ + R RRFG
Sbjct: 208 VDLMIRTGGDYRISNFVLWQAAYAELVFMDTLWPDFDEQAFHEAIATFASRQRRFGLTGS 267
Query: 242 K 242
+
Sbjct: 268 Q 268
>gi|300724789|ref|YP_003714114.1| undecaprenyl pyrophosphate synthetase [Xenorhabdus nematophila ATCC
19061]
gi|297631331|emb|CBJ92026.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase)
[Xenorhabdus nematophila ATCC 19061]
Length = 251
Score = 289 bits (739), Expect = 3e-76, Method: Composition-based stats.
Identities = 91/230 (39%), Positives = 136/230 (59%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IIMDGNGRWA RG R GHR GI+ V+ + + I++LT++AFS NW
Sbjct: 13 VPRHVAIIMDGNGRWAKKRGKLRVFGHRAGIKAVRNTVSFSVKHNIESLTLYAFSSENWN 72
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+S L++L L +L K+N+K+ VIG+ + ++ + + T NTG
Sbjct: 73 RPQQEVSSLMELFVFALDNEVKNLHKHNVKLSVIGDISRFSSRLQERIRRSVELTSGNTG 132
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L IA NY R ++ +++K I I++ + ++ + I +++ S D DL+IRTG
Sbjct: 133 LQLNIAANYGGRWDLVQSVKQIADKIKANELAPEEITEATIDDFINLSQQSDVDLVIRTG 192
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE R+S+FL+WQ+AY+E F WPDF F A+N + R+RRFGG
Sbjct: 193 GEHRISNFLIWQIAYAELYFTDILWPDFDETAFEGAINAFAKRERRFGGT 242
>gi|157962700|ref|YP_001502734.1| undecaprenyl diphosphate synthase [Shewanella pealeana ATCC 700345]
gi|157847700|gb|ABV88199.1| undecaprenyl diphosphate synthase [Shewanella pealeana ATCC 700345]
Length = 266
Score = 289 bits (739), Expect = 3e-76, Method: Composition-based stats.
Identities = 89/241 (36%), Positives = 143/241 (59%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+++++ S P H+ IIMDGNGRWA A+G PR GH+ G++ V+ A +G+++LT+F
Sbjct: 19 ISALVKQSIPKHVAIIMDGNGRWAQAQGKPRVIGHKAGVKAVRRAVSTARNLGVESLTLF 78
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP E+S L++L + L++ L N +++ +IG+ + + AE
Sbjct: 79 AFSSENWRRPDKEVSLLMELFFTVLQRELKLLHNNGVRLNIIGDISRFSPRLQKQIAAAE 138
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T N L L +A NY R +I +A + + +ESG + S ++++L + +
Sbjct: 139 EKTADNKDLVLNVAANYGGRWDIMQAAQKLAAKVESGEMSSTQFTEEALSEHLCMQNQAE 198
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRTGG+ R+S+F+LWQ AY+E VF WPDF + F A+ + R RRFG
Sbjct: 199 VDLMIRTGGDYRISNFVLWQAAYAELVFTDTLWPDFDEDAFKDAIAIFANRQRRFGLTGT 258
Query: 242 K 242
+
Sbjct: 259 Q 259
>gi|34763575|ref|ZP_00144510.1| Undecaprenyl pyrophosphate synthetase [Fusobacterium nucleatum
subsp. vincentii ATCC 49256]
gi|27886764|gb|EAA23902.1| Undecaprenyl pyrophosphate synthetase [Fusobacterium nucleatum
subsp. vincentii ATCC 49256]
Length = 230
Score = 289 bits (739), Expect = 3e-76, Method: Composition-based stats.
Identities = 97/235 (41%), Positives = 141/235 (60%), Gaps = 7/235 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M + P+HI IIMDGNGRWA RGL R GH +G + + + E+G+K LT++AFS
Sbjct: 1 MEKNIPNHIAIIMDGNGRWAKKRGLARSFGHMEGAKTLRKALEYLTEIGVKYLTVYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+S L+KL ++K ++ KN I+ V G + ++ + + +++ E++T+
Sbjct: 61 ENWNRPQDEVSTLMKLFLKYIKSERKNMMKNKIRFFVSGRKNNVPEKLQKEIEKLEEETK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N + L IAFNY SR EI A+ I +D + ++ +KYL +D PDPDL+
Sbjct: 121 NNDKITLNIAFNYGSRAEIVDAVNRIIKDRK------ENITEEDFSKYLY-NDFPDPDLV 173
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IRT GE R+S+FLLWQ+AYSE WPDF + A+ Y R+RRFGG+
Sbjct: 174 IRTSGEMRISNFLLWQIAYSELYITDTLWPDFDEKEIDKAIESYKQRERRFGGVK 228
>gi|149202143|ref|ZP_01879116.1| undecaprenyl diphosphate synthase [Roseovarius sp. TM1035]
gi|149144241|gb|EDM32272.1| undecaprenyl diphosphate synthase [Roseovarius sp. TM1035]
Length = 247
Score = 289 bits (739), Expect = 3e-76, Method: Composition-based stats.
Identities = 111/241 (46%), Positives = 147/241 (60%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + P H+ IIMDGNGRWA RG PR GH G EIV + +G+K LTI
Sbjct: 7 MAGKSAPAEGPRHVAIIMDGNGRWAQKRGRPRLFGHHAGARRVREIVQSCPGLGVKYLTI 66
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW+R +E++ L+ L + ++ K + N++VR IG+R LD + ++ EA
Sbjct: 67 FAFSTENWKRTQTEVAGLMSLFRRYIMKEMQEFVRENVQVRFIGDRPRLDAKLRGLMDEA 126
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E T TG NL IA NY RDE+SRA K + D+ G + DVD + +YLDT +P
Sbjct: 127 EAMTAHCTGTNLTIALNYGGRDEVSRATKRLAIDVAEGRLRPEDVDEETLPRYLDTCVLP 186
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GE R+S+FLLWQ AY+E+ FI WPDF+ ++F L QY RDRRFG +
Sbjct: 187 DPDLVIRTSGEARISNFLLWQSAYAEYEFIDTLWPDFTPDVFARLLAQYGARDRRFGAVP 246
Query: 241 K 241
Sbjct: 247 A 247
>gi|261364374|ref|ZP_05977257.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria mucosa ATCC
25996]
gi|288567642|gb|EFC89202.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria mucosa ATCC
25996]
Length = 248
Score = 289 bits (739), Expect = 3e-76, Method: Composition-based stats.
Identities = 100/238 (42%), Positives = 146/238 (61%), Gaps = 6/238 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ +S P HI +IMDGNGRWA R LPR GH++G++V +V A++G++ LT+FAFS
Sbjct: 9 LEHTSVPKHIAVIMDGNGRWAKKRFLPRVMGHKRGLDVLENMVKHCAKLGVQYLTVFAFS 68
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRRP E+S L+ L L+K L +NN++++V+G+R + IL ++EAE T
Sbjct: 69 TENWRRPEDEVSFLMGLFLQALQKQVRRLHENNMRLKVLGSRERFNRQILQGIEEAEALT 128
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NTGL L IA +Y R +I +A + + ++ +AK+L D P+PDL
Sbjct: 129 ANNTGLTLSIAADYGGRWDILQAANKLIAEGV------SEITEDALAKHLMLGDAPEPDL 182
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTGGE R+S+FLLWQ+AY+E F WPDF + A+ + R+RRFG S++
Sbjct: 183 FIRTGGETRISNFLLWQMAYAELYFTDTLWPDFDSKALDDAVASFQKRERRFGRTSEQ 240
>gi|146310376|ref|YP_001175450.1| undecaprenyl pyrophosphate synthase [Enterobacter sp. 638]
gi|145317252|gb|ABP59399.1| Undecaprenyl pyrophosphate synthetase [Enterobacter sp. 638]
Length = 252
Score = 289 bits (739), Expect = 3e-76, Method: Composition-based stats.
Identities = 90/239 (37%), Positives = 140/239 (58%), Gaps = 4/239 (1%)
Query: 6 MSSSPP----DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+S + P H+ IIMDGNGRWA +G R GH+ G + V+ AA GI LT++
Sbjct: 8 ISENLPAHGCRHVAIIMDGNGRWAKRQGKIRAFGHKAGAKSVRRAVSFAANNGIDALTLY 67
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E++ L++L L SL ++N+++R+IG+ + + +++AE
Sbjct: 68 AFSSENWNRPPQEVTALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKAE 127
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T NTGL L IA NY R +I + ++++ + ++ G + +D + + + +++
Sbjct: 128 AVTENNTGLTLNIAANYGGRWDIIQGVRHLAEQVQEGLLRPDQIDEEALGQQICMNELAP 187
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRTGGE R+S+FLLWQ+AY+E F WPDF + F AL + R+RRFGG
Sbjct: 188 VDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALYAFANRERRFGGTE 246
>gi|53711796|ref|YP_097788.1| undecaprenyl pyrophosphate synthase [Bacteroides fragilis YCH46]
gi|60680027|ref|YP_210171.1| undecaprenyl pyrophosphate synthase [Bacteroides fragilis NCTC
9343]
gi|253564136|ref|ZP_04841593.1| undecaprenyl pyrophosphate synthetase [Bacteroides sp. 3_2_5]
gi|265765177|ref|ZP_06093452.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides sp. 2_1_16]
gi|52214661|dbj|BAD47254.1| undecaprenyl pyrophosphate synthetase [Bacteroides fragilis YCH46]
gi|60491461|emb|CAH06211.1| putative undecaprenyl pyrophosphate synthetase [Bacteroides
fragilis NCTC 9343]
gi|251947912|gb|EES88194.1| undecaprenyl pyrophosphate synthetase [Bacteroides sp. 3_2_5]
gi|263254561|gb|EEZ25995.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroides sp. 2_1_16]
gi|301161568|emb|CBW21108.1| putative undecaprenyl pyrophosphate synthetase [Bacteroides
fragilis 638R]
Length = 244
Score = 289 bits (739), Expect = 3e-76, Method: Composition-based stats.
Identities = 99/240 (41%), Positives = 144/240 (60%), Gaps = 2/240 (0%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ + P H+ IIMDGNGRWA RG R GH+ G E + I AA +GIK LT++
Sbjct: 5 EQIDLNRIPKHVAIIMDGNGRWAKLRGHERSFGHQAGAETVHIITEEAARLGIKFLTLYT 64
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RP E++ L+ L+ +++ + KNNI R+IG+ L +++ L +
Sbjct: 65 FSTENWNRPSDEVAALMSLLFDSIEEE--TFMKNNISFRIIGDINKLPENVRERLNACVE 122
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTG+ L +A +YS+R EI+ A + I +++G + ++ S I +L T+ +PDP
Sbjct: 123 HTSKNTGMCLILALSYSARWEITEATRQIATLVQNGEMNPEEITSESIRTHLTTNFMPDP 182
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL+IRTGGE RLS++LLWQ AYSE F +WPDF E A+ Y R+RRFG S++
Sbjct: 183 DLLIRTGGEVRLSNYLLWQCAYSELYFCETFWPDFKEEELCKAICDYQKRERRFGKTSEQ 242
>gi|315924485|ref|ZP_07920706.1| di-trans,poly-cis-decaprenylcistransferase [Pseudoramibacter
alactolyticus ATCC 23263]
gi|315622189|gb|EFV02149.1| di-trans,poly-cis-decaprenylcistransferase [Pseudoramibacter
alactolyticus ATCC 23263]
Length = 239
Score = 289 bits (739), Expect = 3e-76, Method: Composition-based stats.
Identities = 94/237 (39%), Positives = 142/237 (59%), Gaps = 4/237 (1%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P H+ IIMDGNGRWA R PR GH ++ + A+++GI+ LT++AF
Sbjct: 7 QIDENRLPAHVAIIMDGNGRWAKQRKRPRIFGHYTAMKAVRGTIRTASDMGIRVLTLYAF 66
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+S L+ L + K +L ++++VRVIG++ L + + +Q
Sbjct: 67 STENWKRSQEEVSGLMNLAIDYFIKEVTNLDDHDVQVRVIGDQSILPERLQKAAANMVEQ 126
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NTG+ L IA NY R++I +A++ I + + + + A +L T+ +PDPD
Sbjct: 127 TKGNTGMVLNIALNYGGREDILQAVRQIVAE----GIVPEAITEQVFADHLYTAGLPDPD 182
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
L+IRT GE+RLS+FLLWQ AY+EF+F P WPDF LF + Y RDRR+GG+
Sbjct: 183 LVIRTSGEERLSNFLLWQNAYAEFIFDPVLWPDFDETLFCKLIAAYQQRDRRYGGVK 239
>gi|123968731|ref|YP_001009589.1| undecaprenyl pyrophosphate synthetase [Prochlorococcus marinus str.
AS9601]
gi|123198841|gb|ABM70482.1| Undecaprenyl pyrophosphate synthetase (UPPS) [Prochlorococcus
marinus str. AS9601]
Length = 267
Score = 289 bits (739), Expect = 3e-76, Method: Composition-based stats.
Identities = 90/240 (37%), Positives = 135/240 (56%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P+H+ IIMDGNGRWA +G PR GH+KG+ V EI+ A+ ++G K LT+
Sbjct: 14 LSMKIDKQKVPEHVAIIMDGNGRWATKKGFPRTYGHKKGVSVLKEILKASKKLGCKVLTV 73
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP E+ L+ L L+ + + + K++ IG+ +++ ++ +
Sbjct: 74 YAFSTENWTRPTKEVDFLINLFIEVLRNEIREIHEESTKIKFIGDITPFPENLKKIISNS 133
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E T+ N L + NY R EI + K + SG + +V+ L L T +
Sbjct: 134 ESLTKNNNKFLLNVCVNYGGRQEIVKVAKELALKSSSGEIKPSEVNEELFNSELLTRGIK 193
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DP+L+IRT GEKR+S+FLLWQ+AYSE WPDF+ F A+ Y R+RRFGG+
Sbjct: 194 DPELLIRTSGEKRISNFLLWQLAYSEIYISDVMWPDFNEFEFLKAIIDYQSRNRRFGGIE 253
>gi|320529257|ref|ZP_08030349.1| di-trans,poly-cis-decaprenylcistransferase [Selenomonas artemidis
F0399]
gi|320138887|gb|EFW30777.1| di-trans,poly-cis-decaprenylcistransferase [Selenomonas artemidis
F0399]
Length = 262
Score = 289 bits (739), Expect = 3e-76, Method: Composition-based stats.
Identities = 100/241 (41%), Positives = 147/241 (60%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ ++ + P H+ I+MDGNGRWA A+GL R AGH G+ IV AA+++GI+ LT++
Sbjct: 21 ICAVRCENMPHHVAIVMDGNGRWAKAQGLSRSAGHEAGVRTLKRIVRAASDMGIEVLTVY 80
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E+ L++L SFL+K + + N+++ IG R D ++EAE
Sbjct: 81 AFSTENWKRPPIEVDFLMRLFDSFLQKEIEEMHRENVRIHFIGRRDRFGDRFRRRMREAE 140
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ NTGL +A NY +DEI RA ++ + + SG + D+D + + LDT+ P
Sbjct: 141 NLMANNTGLRFNVAVNYGGQDEILRAAHSLAERVASGQLTPEDIDEAAFSNELDTAGDPP 200
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL IRT G+ RLS+FLLWQ AY+EF F WPDF+ + A+ + R RRFGGL+
Sbjct: 201 VDLFIRTSGDLRLSNFLLWQSAYAEFYFTDTLWPDFTPDHLAAAVEDFAGRTRRFGGLTA 260
Query: 242 K 242
+
Sbjct: 261 E 261
>gi|238893170|ref|YP_002917904.1| undecaprenyl pyrophosphate synthase [Klebsiella pneumoniae
NTUH-K2044]
gi|238545486|dbj|BAH61837.1| undecaprenyl pyrophosphate synthetase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 252
Score = 289 bits (739), Expect = 3e-76, Method: Composition-based stats.
Identities = 88/232 (37%), Positives = 141/232 (60%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++AFS NW RP
Sbjct: 18 RHVAIIMDGNGRWAKRQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRP 77
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E+S L++L L SL ++N+++R+IG+ + + +++AE T NTGL
Sbjct: 78 AQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTTRFNARLQERIRKAEALTANNTGLT 137
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L IA NY R +I++ ++ + + ++ G++ + ++++ + ++ DL+IRTGGE
Sbjct: 138 LNIAANYGGRWDITQGVRLLAKQVQDGTLLPEQITEDMLSQQVCMHELAPVDLVIRTGGE 197
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
R+S+FL+WQ+AY+E F WPDF+ + F AL+ + R+RRFGG G
Sbjct: 198 HRISNFLIWQIAYAELYFTDVLWPDFAEQDFEGALHAFVNRERRFGGTEPGG 249
>gi|332307501|ref|YP_004435352.1| undecaprenyl diphosphate synthase [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332174830|gb|AEE24084.1| undecaprenyl diphosphate synthase [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 246
Score = 289 bits (739), Expect = 3e-76, Method: Composition-based stats.
Identities = 101/233 (43%), Positives = 144/233 (61%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IIMDGNGRWA +G R GHR G++ V+ + + IK LT+FAFS NW
Sbjct: 12 VPQHVAIIMDGNGRWAKKKGKIRTFGHRAGVKGVRASVSFSLKNKIKVLTLFAFSSENWN 71
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ L++L K L L KNN+K+RVIG+ D ++ +K+AE T N G
Sbjct: 72 RPQEEVGVLMELFKMVLSSEVKKLHKNNVKLRVIGDTSRFDKKLVEQIKDAETLTANNDG 131
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L IA NY R +I A K + + ++ GS+ S +D +++ +Y SD+P+ DL+IRTG
Sbjct: 132 LILNIAANYGGRWDILNATKALAEQVKEGSLESEQIDEAMLNRYTCCSDLPELDLLIRTG 191
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE R+S+FLLWQVAY+E F YWPDF+ + F A++ + R RR+G ++
Sbjct: 192 GETRISNFLLWQVAYAELYFTDTYWPDFNEDAFQLAIDNFADRQRRYGMTGEQ 244
>gi|238854748|ref|ZP_04645078.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus jensenii
269-3]
gi|260663980|ref|ZP_05864833.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus jensenii
SJ-7A-US]
gi|282932861|ref|ZP_06338258.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus jensenii
208-1]
gi|238832538|gb|EEQ24845.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus jensenii
269-3]
gi|260561866|gb|EEX27835.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus jensenii
SJ-7A-US]
gi|281302896|gb|EFA95101.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus jensenii
208-1]
Length = 237
Score = 289 bits (739), Expect = 3e-76, Method: Composition-based stats.
Identities = 109/237 (45%), Positives = 154/237 (64%), Gaps = 2/237 (0%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M +H+ IIMDGNGRWA R LPR GH++G++ +I AA ++G+K LT++AFS
Sbjct: 1 MTKEKELNHLAIIMDGNGRWAQKRHLPRVMGHKQGMQNIEKIALAANKMGVKVLTLYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP E+S L+KL +F K L +NN+KV ++G L + L V K+A T
Sbjct: 61 TENWGRPTDEVSYLMKLPITFFDKFMPKLMENNVKVNIMGFLDELPEKTLAVTKKAMADT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV--PDP 182
+ NTG+ L AFNY SR EI+ AIK I + +++ S+ D++ L+ + L T+D+ PDP
Sbjct: 121 KNNTGMILNFAFNYGSRREITSAIKKIAEKVKNESINLEDINDELVNQELLTADLPYPDP 180
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DLI+RT GE+R+S+FLLWQ+AYSE F +YWPDF+ E + + +RDRRFG L
Sbjct: 181 DLILRTSGEQRISNFLLWQLAYSELAFTDKYWPDFNEEDLKKVIMDFQMRDRRFGKL 237
>gi|163815218|ref|ZP_02206595.1| hypothetical protein COPEUT_01378 [Coprococcus eutactus ATCC 27759]
gi|158449413|gb|EDP26408.1| hypothetical protein COPEUT_01378 [Coprococcus eutactus ATCC 27759]
Length = 242
Score = 289 bits (739), Expect = 3e-76, Method: Composition-based stats.
Identities = 107/229 (46%), Positives = 140/229 (61%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P+H+ +IMDGNGRWA R LPR GH +G + I ++GIK+LT++AFS NW
Sbjct: 11 NVPEHVAVIMDGNGRWAKKRFLPRNYGHAEGAKALEAICENCDKLGIKHLTVYAFSTENW 70
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+R V E++ ++ L + +L N+KV +IG R L +DI+ + + E T NT
Sbjct: 71 KRSVEEVTGIMNLFRKYLVDSIERSNNANMKVNLIGKREGLPEDIVQKMNDLERATANNT 130
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL IA NY RDEI RA K I D G V + D+D L A YLDT VPDPDL+IRT
Sbjct: 131 GLQFHIAINYGGRDEIVRATKKILNDAADGKVKAGDIDEKLFADYLDTKGVPDPDLLIRT 190
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
GE+R S+FL WQ+AYSEF F WPDF + A+ YN R+RRFG
Sbjct: 191 SGEERTSNFLPWQLAYSEFYFTDTLWPDFDMDSLVEAVRYYNKRERRFG 239
>gi|90419596|ref|ZP_01227506.1| undecaprenyl pyrophosphate synthetase [Aurantimonas manganoxydans
SI85-9A1]
gi|90336533|gb|EAS50274.1| undecaprenyl pyrophosphate synthetase [Aurantimonas manganoxydans
SI85-9A1]
Length = 238
Score = 289 bits (739), Expect = 3e-76, Method: Composition-based stats.
Identities = 122/231 (52%), Positives = 163/231 (70%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA ARGLPR GHR+G+E E V AA E+GI+ LT+FAFS NWRRP
Sbjct: 5 QHVAIIMDGNGRWANARGLPRSMGHRRGVEAVREAVRAAGELGIQYLTLFAFSSENWRRP 64
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
+E+ EL+ L+K F+++ L K ++VRVIG R +L DI +L+EAE+ TR N
Sbjct: 65 EAEVEELMGLLKHFIRRDLAELHKEGVRVRVIGERENLSSDIRALLEEAENLTRDNQRQT 124
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L +AFNY +RDE++RA++ + +G V + + + ++LDT+ +PDPDLIIRT GE
Sbjct: 125 LVVAFNYGARDEVARAMRRVAAKYAAGEVELEGLTAEYLDEHLDTAGIPDPDLIIRTSGE 184
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RLS+FLLWQ AYSEFVF+P WPDF R+ F A+ Y RDRR+GGLS++
Sbjct: 185 LRLSNFLLWQAAYSEFVFLPCLWPDFDRKAFEEAIADYFSRDRRYGGLSRE 235
>gi|251790740|ref|YP_003005461.1| undecaprenyl diphosphate synthase [Dickeya zeae Ech1591]
gi|247539361|gb|ACT07982.1| undecaprenyl diphosphate synthase [Dickeya zeae Ech1591]
Length = 253
Score = 288 bits (738), Expect = 3e-76, Method: Composition-based stats.
Identities = 89/230 (38%), Positives = 137/230 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG R GH+ G++ ++ A ++ LT++AFS NW R
Sbjct: 17 PRHVAIIMDGNGRWAKQRGKLRIFGHQAGVKSVRRAISYAVGQNLEALTLYAFSSENWNR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L L +L K+N+++RVIG+ + +++ +E T NTGL
Sbjct: 77 PAQEVSALMELFVRVLNSEVKNLHKHNVRLRVIGDISRFSSRLQGLIQRSEAMTENNTGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I ++ I + ++ G + +D S + +Y+ +D+ DL+IRT G
Sbjct: 137 TLNIAANYGGRWDIIHGVRKIAEQVQEGLLRPDTIDESTLNRYMCLNDLAPVDLLIRTSG 196
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E R+S+FLLWQ+AY+E F WPDF + F A++ + R+RRFGG +
Sbjct: 197 EHRISNFLLWQIAYAELYFTDVLWPDFDEQTFEGAIHAFAQRERRFGGTT 246
>gi|225388994|ref|ZP_03758718.1| hypothetical protein CLOSTASPAR_02739 [Clostridium asparagiforme
DSM 15981]
gi|225044934|gb|EEG55180.1| hypothetical protein CLOSTASPAR_02739 [Clostridium asparagiforme
DSM 15981]
Length = 240
Score = 288 bits (738), Expect = 3e-76, Method: Composition-based stats.
Identities = 106/231 (45%), Positives = 150/231 (64%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ +I+DGNGRWA RGLPR GH++G + V AA +GI+ LT++ FS NW+
Sbjct: 9 IPQHVALILDGNGRWAKKRGLPRTMGHKEGCVTVEKTVEIAARMGIRYLTVYGFSTENWK 68
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ L++L + ++ + NN++V++IG+R D DI+ + E +T+ NTG
Sbjct: 69 RSADEVGALMQLFRFYMVRLLKIASANNVRVKMIGDRARFDRDIIEGINRLESETKDNTG 128
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L IA NY RDEI RA K + QD +G V + +D + A YLDT+D+PDPDL+IRT
Sbjct: 129 LTFVIAVNYGGRDEIRRAAKRLAQDCTAGKVDADQIDEATFASYLDTADMPDPDLLIRTS 188
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
GE RLS++LLWQ+AY+E V WPDF++E A+ QYN R+RRFGG+
Sbjct: 189 GELRLSNYLLWQLAYTEIVVTDCLWPDFNKEELEKAIVQYNRRERRFGGVK 239
>gi|114048196|ref|YP_738746.1| undecaprenyl pyrophosphate synthetase [Shewanella sp. MR-7]
gi|113889638|gb|ABI43689.1| Undecaprenyl pyrophosphate synthetase [Shewanella sp. MR-7]
Length = 275
Score = 288 bits (738), Expect = 3e-76, Method: Composition-based stats.
Identities = 91/241 (37%), Positives = 148/241 (61%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ ++ S P H+ IIMDGNGRWA +G PR GH+ G++ V+AA+++GI++LT+F
Sbjct: 28 LPELVKQSLPKHVAIIMDGNGRWAQTQGKPRVMGHKAGVKAVRRAVSAASQLGIQSLTLF 87
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP E+S L++L + L++ L KN +++ +IG+ + ++ AE
Sbjct: 88 AFSSENWRRPDKEVSLLMELFFTVLQREIKLLDKNQVRLNIIGDISRFSARLQKQIRAAE 147
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T N GL L +A NY R +I +A + + + +E+G + S ++++L + +
Sbjct: 148 EKTASNNGLILNVAANYGGRWDILQAAQKLAEKVETGEMTSSQFTEEALSEHLCMQNQSE 207
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRTGG+ R+S+F+LWQ AY+E VF+ WPDF + F A+ + R RRFG
Sbjct: 208 VDLMIRTGGDYRISNFVLWQAAYAELVFLDTLWPDFDEQAFHEAIATFASRQRRFGLTGS 267
Query: 242 K 242
+
Sbjct: 268 Q 268
>gi|253580860|ref|ZP_04858123.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251847930|gb|EES75897.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 235
Score = 288 bits (738), Expect = 3e-76, Method: Composition-based stats.
Identities = 105/234 (44%), Positives = 147/234 (62%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P+HI II+DGNGRWA A+G+PR GH KG + E+G+K +T++AFS NW
Sbjct: 2 NVPNHIAIILDGNGRWAKAKGMPRSYGHVKGCANLETVCDYMKELGVKYVTVYAFSTENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+R E+ L+KL +S+LKK KN ++VRVIG + D DI + E ++
Sbjct: 62 KRSKDEVDGLMKLFRSYLKKCIKLADKNKMRVRVIGEVSAFDQDIQESIARLEQYSQKYD 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+ IA NY SRDEI R I+ + QD G V ++D + YLDT+ +PDPDL+IRT
Sbjct: 122 EIYFQIALNYGSRDEIIRGIRKLAQDAADGKVKPEEIDEHVFDNYLDTAGIPDPDLMIRT 181
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE RLS+FLLWQ+AY+EF F WPDF++ A+ +YN RDRR+GG+ ++
Sbjct: 182 SGELRLSNFLLWQMAYTEFYFTDVAWPDFNKAELIKAIEKYNQRDRRYGGVKEE 235
>gi|225574999|ref|ZP_03783609.1| hypothetical protein RUMHYD_03078 [Blautia hydrogenotrophica DSM
10507]
gi|225037846|gb|EEG48092.1| hypothetical protein RUMHYD_03078 [Blautia hydrogenotrophica DSM
10507]
Length = 256
Score = 288 bits (738), Expect = 3e-76, Method: Composition-based stats.
Identities = 105/236 (44%), Positives = 153/236 (64%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ P+H+ II+DGNGRWA A+G+PR GH KG I +G+K LT++AFS
Sbjct: 21 KMNVPNHVAIILDGNGRWAKAKGMPRSYGHVKGCANLETICDDMKALGVKYLTVYAFSTE 80
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW+R E+ L+KL +++LKK +KN + VRVIG+ + D DI ++ E+ ++
Sbjct: 81 NWKRSKEEVDGLMKLFRNYLKKCIKISEKNKMCVRVIGDIHAFDSDIQESIQRLEEYSKD 140
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
T L+ IA NY RDEI+R I+ + QD++ G + + L+ Y DT+ +PDPDL+I
Sbjct: 141 FTELHFQIALNYGGRDEITRGIRRLAQDVKDGKIAPEAISEELVEGYWDTAGLPDPDLLI 200
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE+RLS+FL WQ+AY+EF F P WPDF+RE A+ +YN RDRR+GG+ ++
Sbjct: 201 RTSGEQRLSNFLPWQLAYTEFYFTPVAWPDFNREELVKAIEKYNERDRRYGGVKEE 256
>gi|163849098|ref|YP_001637142.1| undecaprenyl diphosphate synthase [Chloroflexus aurantiacus
J-10-fl]
gi|222527071|ref|YP_002571542.1| undecaprenyl diphosphate synthase [Chloroflexus sp. Y-400-fl]
gi|163670387|gb|ABY36753.1| undecaprenyl diphosphate synthase [Chloroflexus aurantiacus
J-10-fl]
gi|222450950|gb|ACM55216.1| undecaprenyl diphosphate synthase [Chloroflexus sp. Y-400-fl]
Length = 241
Score = 288 bits (738), Expect = 3e-76, Method: Composition-based stats.
Identities = 103/239 (43%), Positives = 144/239 (60%), Gaps = 4/239 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI +IMDGNGRWA RGLPR AGHR G E IV A +G++ LT++AFS
Sbjct: 7 LAGVAIPQHIAVIMDGNGRWAQQRGLPRIAGHRAGTENIRPIVTECARIGVRVLTLYAFS 66
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP E+ L++++ F+ + +L N+ +R +G L + + A + T
Sbjct: 67 TENWNRPSLEVQGLMQILGEFIDREIQNLHAQNVHLRHLGRLSGLSPHLREKVNYAIELT 126
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
R NTGL L IAFNY R +I A++ I + + + + +I+ +L T +PDPD+
Sbjct: 127 RHNTGLTLAIAFNYGGRADIVDAVRAIV----ASGIPADQITDEVISAHLSTHGLPDPDM 182
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
IIRT GE+RLS+FL+WQ AYSE+ F P +WPDF E A+ Y R+RRFGGL K G
Sbjct: 183 IIRTSGERRLSNFLIWQSAYSEYWFTPVFWPDFRPEHLHQAILDYGRRERRFGGLPKPG 241
>gi|261378086|ref|ZP_05982659.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria cinerea ATCC
14685]
gi|269145535|gb|EEZ71953.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria cinerea ATCC
14685]
Length = 248
Score = 288 bits (738), Expect = 3e-76, Method: Composition-based stats.
Identities = 99/240 (41%), Positives = 145/240 (60%), Gaps = 6/240 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + ++ P HI +IMDGNGRWA R LPR GH++G++ +V A++G++ LT+FA
Sbjct: 7 AVLEHTAIPKHIAVIMDGNGRWAKKRFLPRIMGHKRGLDALENMVKHCAKLGVQYLTVFA 66
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP E+S L+ L L+K L +NN++++++G+R + IL ++EAE
Sbjct: 67 FSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNMRLKILGSRERFNQQILQGIEEAEA 126
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTGL L IA +Y R +I +A + + ++ +AKYL D P+P
Sbjct: 127 LTANNTGLTLSIAADYGGRWDILQAANKLIAEGV------SEITEDTLAKYLMLGDAPEP 180
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL IRTGGE R+S+FLLWQ+AY+E F WPDF A+ + R+RRFG S++
Sbjct: 181 DLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDETALDAAVASFQKRERRFGRTSEQ 240
>gi|220927900|ref|YP_002504809.1| undecaprenyl diphosphate synthase [Clostridium cellulolyticum H10]
gi|219998228|gb|ACL74829.1| undecaprenyl diphosphate synthase [Clostridium cellulolyticum H10]
Length = 251
Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats.
Identities = 100/231 (43%), Positives = 149/231 (64%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI II DGNGRWA RGLPR GHR+G ++V + +G+K+LTI+AFS NW+
Sbjct: 20 VPKHIAIIPDGNGRWAKKRGLPRNVGHREGSMTLKKVVIYCSNIGVKHLTIYAFSTENWK 79
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP SE+ L+ L+ FL+ L+ +N++++VIG+ L ++ + E T +N G
Sbjct: 80 RPQSEVDALMNLLLEFLRNAERELEGSNVRIKVIGDINGLPGELQNEIARVEKFTGVNNG 139
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
LNL IA NY SR EI A++NI Q+I++G + +D+D + ++L T +P+PDL+IRT
Sbjct: 140 LNLNIALNYGSRFEILNAVRNIAQEIKNGKLSINDIDEKQLEQHLYTKGIPEPDLLIRTS 199
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
GE+R+S++LLWQ AY+EF F WPD + A+ + R+RR+GG+
Sbjct: 200 GEQRISNYLLWQCAYTEFWFTDTLWPDINDRHIADAIKAFEKRNRRYGGVE 250
>gi|28899088|ref|NP_798693.1| undecaprenyl diphosphate synthase [Vibrio parahaemolyticus RIMD
2210633]
gi|260362404|ref|ZP_05775359.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio parahaemolyticus
K5030]
gi|260876830|ref|ZP_05889185.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio parahaemolyticus
AN-5034]
gi|260897262|ref|ZP_05905758.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio parahaemolyticus
Peru-466]
gi|42559962|sp|Q87ME1|UPPS_VIBPA RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|28807312|dbj|BAC60577.1| undecaprenyl diphosphate synthase [Vibrio parahaemolyticus RIMD
2210633]
gi|308085347|gb|EFO35042.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio parahaemolyticus
Peru-466]
gi|308091421|gb|EFO41116.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio parahaemolyticus
AN-5034]
gi|308113981|gb|EFO51521.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio parahaemolyticus
K5030]
gi|328474375|gb|EGF45180.1| undecaprenyl pyrophosphate synthase [Vibrio parahaemolyticus 10329]
Length = 251
Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats.
Identities = 100/236 (42%), Positives = 151/236 (63%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S S P HI IIMDGNGRWA ++G PR GH+KG+ + VAAA+++GIK +T+FAFS
Sbjct: 8 SDSLPKHIAIIMDGNGRWAKSKGKPRVFGHKKGVNAVRKTVAAASKLGIKAMTLFAFSSE 67
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+ L++L + L L KNN+++RVIG+ + + + EAE+ T
Sbjct: 68 NWRRPEEEVGLLMELFITVLSSEVKKLHKNNLQLRVIGDTSRFSERLQKKIVEAENLTAS 127
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTG+ + IA NY + +I+ A K + +G + D++ LI ++L +D+P+ DL+I
Sbjct: 128 NTGMVINIAANYGGKWDITEAAKALALKARNGEIRVEDINEQLITEHLTMADLPEVDLLI 187
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE R+S+F+LWQ+AY+E F PE+WP+F + A+ + R+RRFG ++
Sbjct: 188 RTSGECRISNFMLWQMAYAEMYFTPEFWPEFDEDSLVEAVTWFINRERRFGCTGEQ 243
>gi|16759211|ref|NP_454828.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|29140761|ref|NP_804103.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|213163134|ref|ZP_03348844.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
gi|213425947|ref|ZP_03358697.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213581509|ref|ZP_03363335.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
gi|213609347|ref|ZP_03369173.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
gi|213646663|ref|ZP_03376716.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213857438|ref|ZP_03384409.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|289825710|ref|ZP_06544878.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
gi|291080844|ref|ZP_06536504.2| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
gi|42559853|sp|Q8Z9A5|UPPS_SALTI RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|25314081|pir||AG0529 undecaprenyl pyrophosphate synthetase [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16501502|emb|CAD08679.1| undecaprenyl pyrophosphate synthetase [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29136385|gb|AAO67952.1| undecaprenyl pyrophosphate synthetase [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
Length = 252
Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats.
Identities = 90/239 (37%), Positives = 140/239 (58%), Gaps = 4/239 (1%)
Query: 6 MSSSPP----DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+S + P H+ IIMDGNGRWA +G R GH+ G + V+ AA GI LT++
Sbjct: 8 VSENLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIDALTLY 67
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+S L++L L SL ++N+++R+IG+ + + ++++E
Sbjct: 68 AFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDISRFNSRLQERIRKSE 127
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T NTGL L IA NY R +I + ++ + + +++G + +D + + + ++
Sbjct: 128 ALTAHNTGLTLNIAANYGGRWDIVQGVRQLAELVQAGVLRPDQIDEERLGQQICMHELAP 187
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRTGGE R+S+FLLWQ+AY+E F WPDF + F AL+ + R+RRFGG
Sbjct: 188 VDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALHAFANRERRFGGTE 246
>gi|152968768|ref|YP_001333877.1| undecaprenyl pyrophosphate synthase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|262044755|ref|ZP_06017802.1| undecaprenyl diphosphate synthase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330001653|ref|ZP_08304079.1| di-trans,poly-cis-decaprenylcistransferase [Klebsiella sp. MS 92-3]
gi|150953617|gb|ABR75647.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|259037905|gb|EEW39129.1| undecaprenyl diphosphate synthase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328537595|gb|EGF63815.1| di-trans,poly-cis-decaprenylcistransferase [Klebsiella sp. MS 92-3]
Length = 258
Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats.
Identities = 88/232 (37%), Positives = 141/232 (60%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++AFS NW RP
Sbjct: 24 RHVAIIMDGNGRWAKRQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRP 83
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E+S L++L L SL ++N+++R+IG+ + + +++AE T NTGL
Sbjct: 84 AQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTTRFNARLQERIRKAEALTANNTGLT 143
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L IA NY R +I++ ++ + + ++ G++ + ++++ + ++ DL+IRTGGE
Sbjct: 144 LNIAANYGGRWDITQGVRLLAKQVQDGTLLPEQITEDMLSQQVCMHELAPVDLVIRTGGE 203
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
R+S+FL+WQ+AY+E F WPDF+ + F AL+ + R+RRFGG G
Sbjct: 204 HRISNFLIWQIAYAELYFTDVLWPDFAEQDFEGALHAFVNRERRFGGTEPGG 255
>gi|288801911|ref|ZP_06407353.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella
melaninogenica D18]
gi|288335953|gb|EFC74386.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella
melaninogenica D18]
Length = 250
Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats.
Identities = 94/245 (38%), Positives = 146/245 (59%), Gaps = 5/245 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + + P HI I MDGNGRWA R PR GH+ G++ I + +G+K LT+
Sbjct: 1 MAEELDMTRIPQHIAITMDGNGRWATERNKPRSYGHQAGVDTVRRITSECVRLGVKFLTL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW RP EI+ L+ L+ + L+ KNN++ RVIG+ L +++ L E
Sbjct: 61 YTFSTENWNRPTDEIAALMGLVLTSLEDEI--FVKNNVRFRVIGDMARLPEEVQKKLCET 118
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSV---CSHDVDSSLIAKYLDTS 177
E+ T N+ + + +A +YS+R EI++A++ I + ++ S + +I+++L+T+
Sbjct: 119 EEHTAKNSAMTMVVALSYSARWEIAKAMREIVAEHQANSSEPLRPETITEEVISEHLETN 178
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+PDPDL+IRTGGE R+S++LLWQ+AYSE F YWPDF + A+ + R RRFG
Sbjct: 179 FMPDPDLLIRTGGELRISNYLLWQIAYSELYFCDTYWPDFDEQDLQKAIVSFQSRQRRFG 238
Query: 238 GLSKK 242
K+
Sbjct: 239 KTEKQ 243
>gi|253996533|ref|YP_003048597.1| undecaprenyl diphosphate synthase [Methylotenera mobilis JLW8]
gi|253983212|gb|ACT48070.1| undecaprenyl diphosphate synthase [Methylotenera mobilis JLW8]
Length = 252
Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats.
Identities = 101/235 (42%), Positives = 144/235 (61%), Gaps = 3/235 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+ P H+ +IMDGNGRWA R LPR AGH++G+E +IV E+ ++ LT+FAFS N
Sbjct: 15 AEVPKHVAVIMDGNGRWARKRFLPRIAGHKRGVETVRDIVKQCIELKVEYLTLFAFSSEN 74
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+S L+ L LK+ L +NNIK+ +IG+R D ++ ++ +E T N
Sbjct: 75 WRRPPEEVSFLMSLFMEALKREVNKLHQNNIKLIMIGDRSRFDSSLIEKIEASEQLTANN 134
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
TGL L IA NY R ++ +A+ + ++ S D + + YL + P+PDL IR
Sbjct: 135 TGLVLTIAANYGGRWDVLQAVNKM---QKAQPELSGAYDEAHLTPYLSMNYAPEPDLFIR 191
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGEKR+S+FLLWQ+AY+E F WPDF+ F A+ Y R+RRFG S++
Sbjct: 192 TGGEKRISNFLLWQLAYTELYFTDTLWPDFNEAAFKAAIQSYQQRERRFGRTSEQ 246
>gi|170289220|ref|YP_001739458.1| undecaprenyl diphosphate synthase [Thermotoga sp. RQ2]
gi|170176723|gb|ACB09775.1| undecaprenyl diphosphate synthase [Thermotoga sp. RQ2]
Length = 233
Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats.
Identities = 105/232 (45%), Positives = 144/232 (62%), Gaps = 2/232 (0%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ IIMDGNGRWA RGLPR GH++G EV + V + E+GIK LT F+FS NW
Sbjct: 2 RIPQHVAIIMDGNGRWAKKRGLPRIKGHQRGAEVLHNTVKWSLELGIKYLTAFSFSTENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP E+ L+ L + + L++ ++VR++G + L + +L KE E++T+
Sbjct: 62 KRPKEEVEFLMDLFVQMIDREMELLRRERVRVRILGRKEGLPERVLKKWKEVEEKTKEFD 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+ L IAFNY R EI A+++I +D G ++ +YL DVPDPDLIIRT
Sbjct: 122 RMTLIIAFNYGGRREILDAVESILKDASQGKKI--ELTEETFRQYLYLPDVPDPDLIIRT 179
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
GE RLS+FLLWQ AYSE F + WPDF++ F A+ Y+ R+RRFGGLS
Sbjct: 180 SGEMRLSNFLLWQSAYSELYFFKKLWPDFTKRDFLRAIESYSKRERRFGGLS 231
>gi|260428159|ref|ZP_05782138.1| undecaprenyl pyrophosphate synthetase 1 [Citreicella sp. SE45]
gi|260422651|gb|EEX15902.1| undecaprenyl pyrophosphate synthetase 1 [Citreicella sp. SE45]
Length = 245
Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats.
Identities = 108/241 (44%), Positives = 153/241 (63%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + + P H+ IIMDGNGRWA RG PR GH G + EIV A ++G++ +TI
Sbjct: 5 MPKPIREGNGPRHVAIIMDGNGRWAQRRGRPRLFGHHAGAKRVREIVEACPDLGVRYVTI 64
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NWRR SE++ L+ L + ++ K +L + N++VR IG+R+ LD ++ ++ E
Sbjct: 65 FAFSTENWRRTQSEVAGLMSLFRRYITKEARALFEENVRVRFIGDRVRLDKKLVSLMDEL 124
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E T TG+NL IA NY RDE++RA + + QD+ +G + V+ + KYLDT +P
Sbjct: 125 ELMTSGCTGVNLTIAINYGGRDEVARATRRLAQDVAAGKLDPDAVNEETLPKYLDTCVLP 184
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GE R+S+FLLWQ AY+E+ FI WPDF E F + Y R+RR+GG+
Sbjct: 185 DPDLVIRTSGEARISNFLLWQSAYAEYEFIDTLWPDFCAEEFGRLVTAYGNRERRYGGVK 244
Query: 241 K 241
Sbjct: 245 A 245
>gi|163795638|ref|ZP_02189604.1| Undecaprenyl pyrophosphate synthase [alpha proteobacterium BAL199]
gi|159179237|gb|EDP63770.1| Undecaprenyl pyrophosphate synthase [alpha proteobacterium BAL199]
Length = 248
Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats.
Identities = 107/233 (45%), Positives = 157/233 (67%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA ARG+PR GHR+G + V AA E+G+ LT+F FS NW R
Sbjct: 14 PLHVAIIMDGNGRWARARGMPRSFGHREGAKAVKRTVQAACELGVGYLTLFGFSSENWSR 73
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P EI +L++L++ +L++ L K+ I+ RVIG+R DDI+ +++ E T NT +
Sbjct: 74 PAQEIGDLMELLRFYLRREIAELHKDGIRFRVIGDRTLFSDDIVTLIENGERLTAGNTRM 133
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA +Y R E++ A++ I +D+ +G + +D +++A L T+D+PDPDL+IRT G
Sbjct: 134 VLTIALSYGGRRELTGAVRRIAEDVAAGRLDPTAIDETVVASRLYTADLPDPDLLIRTSG 193
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
EKR+S+FLLWQ+AY+EFVF+ WPDF + AL+++ RDRRFG + +G
Sbjct: 194 EKRISNFLLWQIAYAEFVFLDVLWPDFGLQHLEEALDEFARRDRRFGRATGQG 246
>gi|271499500|ref|YP_003332525.1| undecaprenyl diphosphate synthase [Dickeya dadantii Ech586]
gi|270343055|gb|ACZ75820.1| undecaprenyl diphosphate synthase [Dickeya dadantii Ech586]
Length = 253
Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats.
Identities = 90/230 (39%), Positives = 138/230 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG R +GH+ G++ ++ A ++ LT++AFS NW R
Sbjct: 17 PRHVAIIMDGNGRWAKQRGKLRISGHQAGVKSVRRAISYAVSQNLEALTLYAFSSENWNR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L L SL K+N+++RVIG+ + +++ +E T NTGL
Sbjct: 77 PAQEVSALMELFVRVLNSEVKSLHKHNVRLRVIGDISRFSSRLQGLIQRSEAMTENNTGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I ++ I + ++ G + +D S + +Y+ +D+ DL+IRT G
Sbjct: 137 TLNIAANYGGRWDIIHGVRKIAEQVQEGLLRPDTIDESTLNRYMCLNDLAPVDLLIRTSG 196
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E R+S+FLLWQ+AY+E F WPDF + F A++ + R+RRFGG +
Sbjct: 197 EHRISNFLLWQIAYAELYFTDVLWPDFDEQTFEGAIHAFAQRERRFGGTT 246
>gi|227326541|ref|ZP_03830565.1| undecaprenyl pyrophosphate synthetase [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 253
Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats.
Identities = 91/235 (38%), Positives = 140/235 (59%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ + P H+ IIMDGNGRWA +RG R GH+ G++ V+ A G+ LT++AFS
Sbjct: 12 LPPAVPRHVAIIMDGNGRWAKSRGKMRIFGHQAGVKAVRRSVSFAVSQGLDALTLYAFSS 71
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+S L++L L SL K+N+++RVIG+ + ++ +E T
Sbjct: 72 ENWNRPAQEVSALMELFVRALDSEVKSLHKHNVRLRVIGDIGRFSPRLQERIRRSEALTE 131
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N GL L IA NY R +I + ++ + + ++ G + ++ + + +Y+ D+ DL+
Sbjct: 132 KNQGLTLNIAANYGGRWDIIQGVRQLAEQVQEGILRPDSINEASLCQYICLHDLAPVDLV 191
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IRTGGE R+S+FLLWQ+AY+E F WPDF ++F ALN + R+RRFGG +
Sbjct: 192 IRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQVFEGALNAFAQRERRFGGTT 246
>gi|148265749|ref|YP_001232455.1| undecaprenyl pyrophosphate synthase [Geobacter uraniireducens Rf4]
gi|146399249|gb|ABQ27882.1| Undecaprenyl pyrophosphate synthetase [Geobacter uraniireducens
Rf4]
Length = 256
Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats.
Identities = 100/239 (41%), Positives = 142/239 (59%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P H+ +IMDGNGRWA R L R GH+KG+E IV + +GI LT+FAF
Sbjct: 3 KLTKENLPRHLAVIMDGNGRWAKQRMLRRIVGHQKGVETVRLIVEECSRLGISYLTLFAF 62
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP +E+ L+ L+K +++ + NNI+ VIG+R L DI V+ +A Q
Sbjct: 63 SAENWLRPKTEVKALMALLKKYIRSEIARMMHNNIRFNVIGDRGELPVDINRVIDDAIAQ 122
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T N+G+ L +A +Y +R EI A + I D SG + D++ L + YL T+ +P+PD
Sbjct: 123 TAGNSGMLLTLALSYGARQEIVHAARQIAIDAASGKIAIDDINEGLFSDYLYTTRIPEPD 182
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IRT GE R+S+FLLWQ+AY+E F WPDF + A Y R+RRFG S +
Sbjct: 183 FLIRTSGEMRISNFLLWQLAYTELYFTDVNWPDFDKNELAKAFRDYQSRERRFGKTSDQ 241
>gi|194446733|ref|YP_002039461.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194405396|gb|ACF65618.1| di-trans,poly-cis-decaprenylcistransferase [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
Length = 252
Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats.
Identities = 90/239 (37%), Positives = 139/239 (58%), Gaps = 4/239 (1%)
Query: 6 MSSSPP----DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+S + P H+ IIMDGNGRWA +G R GH+ G + V+ AA GI LT++
Sbjct: 8 VSENLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIDALTLY 67
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+S L++L L SL ++N+++R+IG+ + + ++++E
Sbjct: 68 AFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDISRFNSRLQERIRKSE 127
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T NTGL L IA NY R +I + ++ + + + +G + +D + + + ++
Sbjct: 128 ALTAHNTGLTLNIAANYGGRWDIVQGVRQLAEQVLAGVLRPDQIDEERLGQQICMHELAP 187
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRTGGE R+S+FLLWQ+AY+E F WPDF + F AL+ + R+RRFGG
Sbjct: 188 VDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALHAFANRERRFGGTE 246
>gi|158520495|ref|YP_001528365.1| undecaprenyl diphosphate synthase [Desulfococcus oleovorans Hxd3]
gi|158509321|gb|ABW66288.1| undecaprenyl diphosphate synthase [Desulfococcus oleovorans Hxd3]
Length = 247
Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats.
Identities = 99/238 (41%), Positives = 143/238 (60%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+A + + P HI IIMDGNGRWA R L R GHR+G++V IV A E+G+ LT++
Sbjct: 10 LAVLDPARLPRHIAIIMDGNGRWAKQRSLERLEGHRRGVQVIEAIVTACTEIGVSCLTLY 69
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E+ ++ L++ FL LK N +++ V+G L + L A
Sbjct: 70 AFSTENWQRPAPEVEGIMALLEMFLAAKQQELKDNGVRLNVVGEVDMLPASVRAALDRAI 129
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ T+ L L +A +Y R EI+ A + I D+ +G + DVD +L+++YL T D+PD
Sbjct: 130 EHTKSGNTLVLTLALSYGGRSEITAATRRIAADVVAGRIDVKDVDEALVSRYLYTHDMPD 189
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDL+IRT GE R+S+FLLWQ+AY+E P WPDF + + + RDRRFG +
Sbjct: 190 PDLMIRTSGEMRISNFLLWQLAYAELYVTPTLWPDFDKAELIRIIADFQSRDRRFGKV 247
>gi|227432327|ref|ZP_03914320.1| Di-trans,poly-cis-decaprenylcistransferase [Leuconostoc
mesenteroides subsp. cremoris ATCC 19254]
gi|227351933|gb|EEJ42166.1| Di-trans,poly-cis-decaprenylcistransferase [Leuconostoc
mesenteroides subsp. cremoris ATCC 19254]
Length = 259
Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats.
Identities = 99/238 (41%), Positives = 140/238 (58%), Gaps = 3/238 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P+HI IIMDGNGRWA R +PR AGH+ G+ I +AA+++G+K LT++ FS NW
Sbjct: 18 KIPEHIAIIMDGNGRWAKKRLIPRAAGHKAGMNTVKRIASAASDMGVKVLTLYVFSTENW 77
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E++ L++L +F L KNNI+V V GN +L + A ++T T
Sbjct: 78 SRPNDEVNFLMQLPIAFFNDFVPDLIKNNIRVSVTGNVDALPAATQDAVNGAIEETANGT 137
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD---PDLI 185
G+ L A NY + EI A K I +++ G + D++S + A L T+ + D PDL+
Sbjct: 138 GMVLNFAMNYGGQVEIVDATKKIAEEVAKGHLSPDDINSEVFAAALQTAHLGDLATPDLM 197
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
IRT GE RLS+FL +Q AY+E F WPD+S + A+ Y RDRRFGGL+ +
Sbjct: 198 IRTSGELRLSNFLPYQAAYAELYFTDVLWPDYSSDDLMTAIQSYTKRDRRFGGLNDES 255
>gi|325129105|gb|EGC51954.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis N1568]
Length = 248
Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats.
Identities = 98/240 (40%), Positives = 144/240 (60%), Gaps = 6/240 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + ++ P HI +IMDGNGRWA R LPR GH++G++ +V A++G++ LT+FA
Sbjct: 7 AVLEHTAIPKHIAVIMDGNGRWAKKRFLPRIMGHKRGLDALENMVKHCAKLGVQYLTVFA 66
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP E+S L+ L L+K L +NN++++++G+R IL ++EAE
Sbjct: 67 FSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNMRLKILGSRERFSRQILKGIEEAEA 126
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTGL L IA +Y R +I +A + + ++ +AK+L D P+P
Sbjct: 127 LTANNTGLTLSIAADYGGRWDILQAANKLIAEGV------SEITEDTLAKHLMLGDAPEP 180
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL IRTGGE R+S+FLLWQ+AY+E F WPDF A+ + R+RRFG S++
Sbjct: 181 DLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDETALDAAVASFQKRERRFGRTSEQ 240
>gi|326794439|ref|YP_004312259.1| undecaprenyl pyrophosphate synthase [Marinomonas mediterranea
MMB-1]
gi|326545203|gb|ADZ90423.1| Undecaprenyl pyrophosphate synthase [Marinomonas mediterranea
MMB-1]
Length = 242
Score = 288 bits (737), Expect = 4e-76, Method: Composition-based stats.
Identities = 108/232 (46%), Positives = 149/232 (64%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+S+ P H+ IIMDGN RWA + LP AGH G V AAA G+K +T+FAFS
Sbjct: 10 ASTVPQHVAIIMDGNNRWAKKKLLPSIAGHTAGASAVRRTVEAAARAGVKVVTLFAFSSE 69
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW+RP E+ L+ L L+K L + NI++RV+GN+ + + + EAE T
Sbjct: 70 NWKRPKLEVDGLMNLFMRSLRKEVKRLNEYNIQLRVVGNKQGFSEKLQHQIMEAEQSTSR 129
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N G+ L IA NY R +I+ A+K + +D G+V D+D L+AKY+ SD+P+PDL+I
Sbjct: 130 NDGMVLVIAANYGGRWDIAEAMKGLARDAIEGTVSVDDIDELLLAKYMQLSDLPEPDLLI 189
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
RT GE+R+S+FLLWQ+AY+EFVF+P WPDFS + F AL+ Y R RR+GG
Sbjct: 190 RTSGEERVSNFLLWQLAYAEFVFLPVLWPDFSEQHFAEALSIYQSRQRRYGG 241
>gi|240102776|ref|YP_002959085.1| Undecaprenyl pyrophosphate synthetase
(Di-trans-poly-cis-decaprenylcistransferase) (uppS)
[Thermococcus gammatolerans EJ3]
gi|239910330|gb|ACS33221.1| Undecaprenyl pyrophosphate synthetase
(Di-trans-poly-cis-decaprenylcistransferase) (uppS)
[Thermococcus gammatolerans EJ3]
Length = 264
Score = 288 bits (737), Expect = 4e-76, Method: Composition-based stats.
Identities = 91/240 (37%), Positives = 141/240 (58%), Gaps = 2/240 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + S + P H+ IIMDGN RWA P GH G EI+ E+GI+ LT+
Sbjct: 25 LFEKVKSGNMPKHVAIIMDGNRRWARKLEKPPWYGHYFGSRKLEEILEWCRELGIRTLTV 84
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFS N++R E++ L+ L + K+ + ++ ++V VIG + L +++ ++
Sbjct: 85 YAFSTENFKRSPEEVNALMNLFERKFKELVNDERIHRHGVRVNVIGRKELLPENVRKAIE 144
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
EAE TR + L IA Y R EI+ A+++I D+ +G V D+D LI +YL +
Sbjct: 145 EAERATRKYSNYTLNIALAYGGRSEITDAVRDIVGDVLAGKVKPEDIDEDLIKRYLYYPN 204
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+PDPD++IRTGGE R+S+FLL+Q+AYSE F+ Y+P+F + F + +Y R RRFG
Sbjct: 205 MPDPDIVIRTGGEVRISNFLLYQIAYSELFFVDVYFPEFRKIDFLRIIREYQKRQRRFGR 264
>gi|256851265|ref|ZP_05556654.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus jensenii
27-2-CHN]
gi|260660689|ref|ZP_05861604.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus jensenii
115-3-CHN]
gi|282934733|ref|ZP_06339976.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus jensenii
208-1]
gi|297206132|ref|ZP_06923527.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus jensenii
JV-V16]
gi|256616327|gb|EEU21515.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus jensenii
27-2-CHN]
gi|260548411|gb|EEX24386.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus jensenii
115-3-CHN]
gi|281301308|gb|EFA93609.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus jensenii
208-1]
gi|297149258|gb|EFH29556.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus jensenii
JV-V16]
Length = 237
Score = 288 bits (737), Expect = 4e-76, Method: Composition-based stats.
Identities = 109/237 (45%), Positives = 154/237 (64%), Gaps = 2/237 (0%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M +H+ IIMDGNGRWA R LPR GH++G++ +I AA E+G+K LT++AFS
Sbjct: 1 MTKEKELNHLAIIMDGNGRWAQKRHLPRVMGHKQGMQNIEKIALAANEMGVKVLTLYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP E+S L+KL +F K L +NN+KV ++G L D L V ++A + T
Sbjct: 61 TENWGRPTDEVSYLMKLPITFFDKFMPKLMENNVKVNIMGFLNELPDKTLAVTQKAMEDT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV--PDP 182
+ NTG+ L AFNY SR EI+ AIK I + +++ S+ D++ L+ + L T+++ PDP
Sbjct: 121 KNNTGMILNFAFNYGSRREITTAIKKIAKQVKNESITLEDINDKLVNQELLTANLPYPDP 180
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DLI+RT GE+R+S+FLLWQ+AYSE F +YWPDF+ E + + RDRRFG L
Sbjct: 181 DLILRTSGEQRISNFLLWQLAYSELAFTDKYWPDFNEEDLKKVIMDFQGRDRRFGKL 237
>gi|254492640|ref|ZP_05105811.1| undecaprenyl diphosphate synthase [Methylophaga thiooxidans DMS010]
gi|224462161|gb|EEF78439.1| undecaprenyl diphosphate synthase [Methylophaga thiooxydans DMS010]
Length = 247
Score = 288 bits (737), Expect = 4e-76, Method: Composition-based stats.
Identities = 95/234 (40%), Positives = 145/234 (61%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P+HI IIMDGNGRWA R PR GHR G++ IV A+ G+K L++FAFS NW
Sbjct: 7 NIPNHIAIIMDGNGRWAKRRLQPRFMGHRAGVKAVEGIVKHCAQRGVKILSLFAFSSENW 66
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RRP E+S L++L L L NNIK+ +IG+ + + +A+ T NT
Sbjct: 67 RRPGKEVSLLMELFSHALNNQVKKLHDNNIKLCIIGDLEQFSPALQEQITKAQQLTANNT 126
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL + IA NY R +I+++++ + + + G + + +I+++L T+ +P+PDL IRT
Sbjct: 127 GLIVNIAANYGGRWDITQSVRQLAEQVRLGEITPDAITEDMISQHLTTAALPEPDLFIRT 186
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GGE+R+S+FLLWQ+AY+EF F WP+F+ A+ ++ R+RRFG S++
Sbjct: 187 GGEQRVSNFLLWQMAYTEFYFTDLLWPEFNANALDLAIASFSQRERRFGRTSEQ 240
>gi|87118623|ref|ZP_01074522.1| undecaprenyl diphosphate synthase [Marinomonas sp. MED121]
gi|86166257|gb|EAQ67523.1| undecaprenyl diphosphate synthase [Marinomonas sp. MED121]
Length = 248
Score = 288 bits (737), Expect = 5e-76, Method: Composition-based stats.
Identities = 103/232 (44%), Positives = 143/232 (61%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ P HI IIMDGN RWA R LP AGH+ G +V AA G+K LT+FAFS
Sbjct: 16 QADIPSHIAIIMDGNNRWAKQRFLPGIAGHKAGAGAVRRVVEDAARAGVKVLTLFAFSSE 75
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW+RP +E+ L+ L LKK + K +I++R++G D + + +E +T+
Sbjct: 76 NWKRPQAEVDALMMLFMRSLKKEVKRMNKQDIRLRIMGEVSGFSDKLQAQIALSEKETQD 135
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N G+ L IA NY R +IS A + + Q + G + ++ IA L +D+PDPDLII
Sbjct: 136 NQGMQLVIAANYGGRGDISHAARKVCQQVLDGELNLDQINEETIASQLYLADLPDPDLII 195
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
RT GE+R+S+FLLWQ AYSEFVF+P WPDF+++ F HA++ Y R RR+GG
Sbjct: 196 RTSGEERISNFLLWQAAYSEFVFLPVLWPDFNKDDFQHAIDLYQQRQRRYGG 247
>gi|37524678|ref|NP_928022.1| undecaprenyl pyrophosphate synthetase [Photorhabdus luminescens
subsp. laumondii TTO1]
gi|42559747|sp|Q7N8P2|UPPS_PHOLL RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|36784103|emb|CAE12972.1| undecaprenyl pyrophosphate synthetase [Photorhabdus luminescens
subsp. laumondii TTO1]
Length = 254
Score = 288 bits (737), Expect = 5e-76, Method: Composition-based stats.
Identities = 101/234 (43%), Positives = 142/234 (60%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+SS P H+ IIMDGNGRWA RG R GHR GI+ V+ +A+ I++LT++AFS
Sbjct: 12 LSSLLPKHVAIIMDGNGRWAKKRGKLRAFGHRAGIKAVRSAVSFSAKHNIESLTLYAFSS 71
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+S L++L L SL K+NI++ VIG+ + + + + T
Sbjct: 72 ENWNRPEQEVSSLMELFIFALDSEIKSLHKHNIRLSVIGDIGRFSERLQDRIHRSVKLTA 131
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
NTGL L IA NY R +I ++++ I Q I+ S+ D+ L+ Y++ S P DL+
Sbjct: 132 NNTGLQLNIAANYGGRWDIVQSVQKIAQQIKDNSLEQQDITEELVNNYMNLSQQPQVDLV 191
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRTGGE R+S+FLLWQ+AY+EF F WPDF +F A+N + R+RRFGG
Sbjct: 192 IRTGGEHRISNFLLWQIAYAEFYFTDILWPDFDENVFEGAINAFAKRERRFGGT 245
>gi|227114692|ref|ZP_03828348.1| undecaprenyl pyrophosphate synthetase [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 253
Score = 288 bits (737), Expect = 5e-76, Method: Composition-based stats.
Identities = 92/235 (39%), Positives = 141/235 (60%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ S+ P H+ IIMDGNGRWA +RG R GH+ G++ V+ A G+ LT++AFS
Sbjct: 12 LPSAGPRHVAIIMDGNGRWAKSRGKMRIFGHQAGVKAVRRSVSFAVSQGLDALTLYAFSS 71
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+S L++L L SL K+N+++RVIG+ + ++ +E T
Sbjct: 72 ENWNRPAQEVSALMELFVRALDSEVKSLHKHNVRLRVIGDIGRFSPRLQERIRRSEALTE 131
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N GL L IA NY R +I + ++ + + ++ G + ++ + + +Y+ D+ DL+
Sbjct: 132 KNQGLTLNIAANYGGRWDIIQGVRQLAEQVQEGILRPDSINEASLCQYICLHDLAPVDLV 191
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IRTGGE R+S+FLLWQ+AY+E F WPDF ++F ALN + R+RRFGG +
Sbjct: 192 IRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQVFEGALNAFAQRERRFGGTT 246
>gi|261338828|ref|ZP_05966686.1| hypothetical protein ENTCAN_05023 [Enterobacter cancerogenus ATCC
35316]
gi|288318651|gb|EFC57589.1| di-trans,poly-cis-decaprenylcistransferase [Enterobacter
cancerogenus ATCC 35316]
Length = 252
Score = 288 bits (737), Expect = 5e-76, Method: Composition-based stats.
Identities = 92/242 (38%), Positives = 141/242 (58%), Gaps = 4/242 (1%)
Query: 6 MSSSPP----DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+S + P H+ IIMDGNGRWA +G R GH+ G + V+ AA GI LT++
Sbjct: 8 ISENLPAHGCRHVAIIMDGNGRWAKRQGKIRAFGHKAGAKSVRRAVSFAANNGIDALTLY 67
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E++ L++L L SL ++N+++R+IG + + +++AE
Sbjct: 68 AFSSENWNRPAQEVTALMELFVWALDSEVKSLHRHNVRLRIIGETSRFNSRLQERIRKAE 127
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T NTGL L IA NY R +I + ++++ + ++ G + +D + K + +++
Sbjct: 128 ALTENNTGLTLNIAANYGGRWDIIQGVRHLAEQVQEGLLRPDQIDEEALNKQICMNELAP 187
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRTGGE R+S+FLLWQ+AY+E F WPDF + F AL+ + R+RRFGG
Sbjct: 188 VDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALHAFANRERRFGGTEP 247
Query: 242 KG 243
G
Sbjct: 248 GG 249
>gi|294140007|ref|YP_003555985.1| undecaprenyl diphosphate synthase [Shewanella violacea DSS12]
gi|293326476|dbj|BAJ01207.1| undecaprenyl diphosphate synthase [Shewanella violacea DSS12]
Length = 264
Score = 288 bits (737), Expect = 5e-76, Method: Composition-based stats.
Identities = 93/236 (39%), Positives = 144/236 (61%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ ++ S P H+ IIMDGNGRWA A+G PR GH+ G++ V+ A E+GI++LT+F
Sbjct: 16 ITELVKQSKPKHVAIIMDGNGRWAQAQGKPRIMGHKAGVKAVRRAVSTAREIGIESLTLF 75
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP E+S L+ L + L++ L KN +++ +IG+ + + + AE
Sbjct: 76 AFSSENWRRPDKEVSFLMGLFFTVLQREIKLLHKNGVRLNIIGDISRFSERLQKQISAAE 135
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T NTGL L +A NY R +I +A + + + +E+G + S ++++L + +
Sbjct: 136 EKTAGNTGLVLNVAANYGGRWDIMQAAQALAKKVETGEMNSSQFTEEALSQHLCMQNQAE 195
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRTGG+ R+S+F+LWQ AY+E VF WPDF F A+ + R RRFG
Sbjct: 196 VDLMIRTGGDYRISNFILWQAAYAELVFTDTLWPDFDENAFKQAVAIFASRQRRFG 251
>gi|297568949|ref|YP_003690293.1| undecaprenyl diphosphate synthase [Desulfurivibrio alkaliphilus
AHT2]
gi|296924864|gb|ADH85674.1| undecaprenyl diphosphate synthase [Desulfurivibrio alkaliphilus
AHT2]
Length = 244
Score = 288 bits (737), Expect = 5e-76, Method: Composition-based stats.
Identities = 96/236 (40%), Positives = 145/236 (61%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
++ P H+ IIMDGNGRWA +G PR GH+ G+ +V A E+ ++ LT++AFS
Sbjct: 5 PANLPRHVAIIMDGNGRWAHQQGKPRIMGHQAGVRSVQAVVRCAGELNLEALTLYAFSTE 64
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW+RP E+ L+ L+K++L+ + +N +++R G+ L + +L+ +T
Sbjct: 65 NWQRPGPEVEGLMGLLKTYLESQLEQMVQNRVRLRTCGHIDRLPTKVRRILENTIRETAD 124
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N GL L +A +Y RDE+ RA + + + G + ++ +A LDT+++PDPDL+I
Sbjct: 125 NDGLILNLALSYGGRDELIRAARKLAARVADGELTPAQINEQTLAAELDTAELPDPDLLI 184
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE+RLS+FLLWQ++YSE F WPDF RE F AL Y R RRFG L+ +
Sbjct: 185 RTGGERRLSNFLLWQLSYSELYFTRTLWPDFGREQFLAALTDYQQRQRRFGRLNDQ 240
>gi|91792915|ref|YP_562566.1| undecaprenyl diphosphate synthase [Shewanella denitrificans OS217]
gi|91714917|gb|ABE54843.1| Undecaprenyl pyrophosphate synthetase [Shewanella denitrificans
OS217]
Length = 271
Score = 288 bits (737), Expect = 5e-76, Method: Composition-based stats.
Identities = 94/241 (39%), Positives = 147/241 (60%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
++ + S P H+ IIMDGNGRWA +G PR GH+ G++ V+ A+++GI +LT+F
Sbjct: 24 LSETVKLSLPKHVAIIMDGNGRWAQQQGKPRVMGHKAGVKAVRRAVSCASQLGIASLTLF 83
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP E+S L++L S L++ L KN +++ +IG+ + + + EA+
Sbjct: 84 AFSSENWRRPDKEVSLLMELFFSVLQREIKLLHKNQVRLNIIGDISRFSERLQKQIHEAQ 143
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T NTGL L +A NY R +I +A + + Q +ESG + S + ++ +L + +
Sbjct: 144 RKTADNTGLILNVAANYGGRWDILQAAQKLAQQVESGEINSSQMTEEALSAHLCMQNQSE 203
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRTGG+ R+S+F+LWQ AY+E VF WPDF+ + F A+ + R RRFG
Sbjct: 204 VDLMIRTGGDCRISNFILWQAAYAELVFTDTLWPDFNEQAFRDAIALFASRQRRFGLTGS 263
Query: 242 K 242
+
Sbjct: 264 Q 264
>gi|300812601|ref|ZP_07093018.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus
delbrueckii subsp. bulgaricus PB2003/044-T3-4]
gi|300496474|gb|EFK31579.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus
delbrueckii subsp. bulgaricus PB2003/044-T3-4]
Length = 243
Score = 288 bits (737), Expect = 5e-76, Method: Composition-based stats.
Identities = 99/240 (41%), Positives = 143/240 (59%), Gaps = 3/240 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M + +H+ IIMDGNGRWA R +PR GH+ G++ +I AA E+GIK LT++AFS
Sbjct: 1 MDKNKQLNHLAIIMDGNGRWAKKRKMPRFMGHKAGMDNVEKIALAADELGIKVLTLYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP E++ L+ L F K L+ +N+KV ++G +L + V++ A +T
Sbjct: 61 TENWARPKDEVNYLMNLPVKFFDKFMPRLQAHNVKVNIMGYLDALPESTREVVERAMAET 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT---SDVPD 181
NTGL L AFNY SR EI A++ + ++ SG + ++ +++ L T + D
Sbjct: 121 AANTGLVLNFAFNYGSRKEIVSAVQALAKEAASGEITPEEITEDMVSAKLMTAKFAPYSD 180
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL+IRT GE+R+S+FLLWQ+AYSE F + WPDF + Y RDRRFG L +
Sbjct: 181 PDLLIRTSGEQRISNFLLWQIAYSELAFTDKAWPDFDENDLAEMVKIYQHRDRRFGKLDE 240
>gi|154250176|ref|YP_001411001.1| undecaprenyl diphosphate synthase [Fervidobacterium nodosum
Rt17-B1]
gi|154154112|gb|ABS61344.1| undecaprenyl diphosphate synthase [Fervidobacterium nodosum
Rt17-B1]
Length = 239
Score = 288 bits (737), Expect = 6e-76, Method: Composition-based stats.
Identities = 91/234 (38%), Positives = 142/234 (60%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+++ P HI IMDGNGRWA +G PR GH G ++V A G+K T +AFS
Sbjct: 6 TNNVPIHIAFIMDGNGRWAKKQGKPRTYGHYVGAYKIEDVVKWCANRGVKYTTFYAFSTE 65
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW+RP+ E++ + L+++ + + + + K +++R IG L + E E++T+
Sbjct: 66 NWKRPMEEVNFIFGLLENKIHEFYERMNKEGVRLRFIGRIDKLPSSLKDKCLEYEEKTKN 125
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N+ + + +AFNY R+EI IK + +D + G++ +D + YL DVPDPDL+I
Sbjct: 126 NSRIQVIMAFNYGGRNEIIDGIKRLMEDTKKGNITPDKLDENSFRNYLYAPDVPDPDLVI 185
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RT GE R+S+FL+WQ+AYSE F WP+F+ E A+++Y+ RDRRFGG+
Sbjct: 186 RTSGEMRISNFLIWQIAYSELYFSKLLWPEFTEEELQKAIDEYSNRDRRFGGIK 239
>gi|322392573|ref|ZP_08066033.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus peroris
ATCC 700780]
gi|321144565|gb|EFX39966.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus peroris
ATCC 700780]
Length = 250
Score = 287 bits (736), Expect = 6e-76, Method: Composition-based stats.
Identities = 105/234 (44%), Positives = 145/234 (61%), Gaps = 4/234 (1%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HIG+IMDGNGRWA R PR GH+ G++ ++ AA+++G+K +T++AFS NW
Sbjct: 17 VPAHIGVIMDGNGRWAKKRMQPRVFGHKAGMDALRKVAIAASDMGVKVMTVYAFSTENWT 76
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ ++ L F K L + N+K+++IG L LK+AE+ T+LNTG
Sbjct: 77 RPDQEVKFIMNLPVEFYDKYVPELHQKNMKIQMIGETDRLPKQTFNALKKAEELTKLNTG 136
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLI 185
L L A NY R EI++A+K I +++ G + S D+D LI YL T +P DPDLI
Sbjct: 137 LILNFALNYGGRAEITQALKLIAEEVSDGKISSADIDEELIGDYLFTGHLPREFRDPDLI 196
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRT GE RLS+FL WQ AYSE F WPDF + A+ ++N R+RRFGG+
Sbjct: 197 IRTSGELRLSNFLPWQAAYSELYFTDVLWPDFDEQALKEAIAEFNRRNRRFGGV 250
>gi|163750355|ref|ZP_02157595.1| undecaprenyl diphosphate synthase [Shewanella benthica KT99]
gi|161329845|gb|EDQ00831.1| undecaprenyl diphosphate synthase [Shewanella benthica KT99]
Length = 264
Score = 287 bits (736), Expect = 6e-76, Method: Composition-based stats.
Identities = 94/236 (39%), Positives = 144/236 (61%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+A ++ S P H+ IIMDGNGRWA ARG PR GH+ G++ V+ A E+GI++LT+F
Sbjct: 16 IAELVKQSKPKHVAIIMDGNGRWAQARGKPRVMGHKAGVKTVRRAVSTAKEMGIESLTLF 75
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP E+S L++L + L++ L KN +++ +IG+ + + + AE
Sbjct: 76 AFSSENWRRPDKEVSLLMELFFTVLQREIKLLHKNGVRLNIIGDTSRFSERLQKQIAAAE 135
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T NT L L +A NY R +I +A + + + +E+G + S ++++L + +
Sbjct: 136 AKTAGNTELILNVAANYGGRWDIMQAAQALAKKVEAGEINSSQFTEEALSQHLCMQNQAE 195
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRTGG+ R+S+F+LWQ AY+E VF WPDF F A+ + R RRFG
Sbjct: 196 VDLMIRTGGDYRISNFILWQAAYAELVFTDTLWPDFDENAFKRAVATFASRQRRFG 251
>gi|75676046|ref|YP_318467.1| di-trans-poly-cis-decaprenylcistransferase [Nitrobacter
winogradskyi Nb-255]
gi|74420916|gb|ABA05115.1| Undecaprenyl pyrophosphate synthetase [Nitrobacter winogradskyi
Nb-255]
Length = 252
Score = 287 bits (736), Expect = 6e-76, Method: Composition-based stats.
Identities = 121/237 (51%), Positives = 164/237 (69%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ P H+ IIMDGNGRWAAARGLPR GHR+G+E +V AA E+ I LTIF+FS
Sbjct: 14 QADAPLHVAIIMDGNGRWAAARGLPRAEGHRRGVEALRRVVRAAGELNILYLTIFSFSSE 73
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP SEIS+L L++ F++ +L ++ ++VRVIG R L+ DI +L EAE+ T+
Sbjct: 74 NWSRPPSEISDLFGLLRRFVRNDLATLHRDGVRVRVIGERDGLEPDISALLTEAEELTKN 133
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N LNL +AFNY SR EI++A + + +++ G +D+ + +YLD D+PDPDLII
Sbjct: 134 NNRLNLVVAFNYGSRQEIAKAARRLAREVAEGKRDPATIDADTLGRYLDAPDIPDPDLII 193
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
RT GE+RLS+FL+WQ AYSEFVF+P +WPDF R A+ +Y R+RRFGGL+ K
Sbjct: 194 RTSGEQRLSNFLMWQAAYSEFVFVPIHWPDFDRTALEGAIAEYARRERRFGGLAAKA 250
>gi|325278090|ref|ZP_08143607.1| undecaprenyl diphosphate synthase [Pseudomonas sp. TJI-51]
gi|324096777|gb|EGB95106.1| undecaprenyl diphosphate synthase [Pseudomonas sp. TJI-51]
Length = 251
Score = 287 bits (736), Expect = 6e-76, Method: Composition-based stats.
Identities = 97/237 (40%), Positives = 145/237 (61%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ SS P H+ IIMDGN RWA R LP AGH+ G++ ++ A+ G++ LT+FAFS
Sbjct: 8 VPSSVPRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAQSGVEVLTLFAFSS 67
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP E+ L++L S L++ L +NNI +R+IG+R ++ ++EAE T
Sbjct: 68 ENWQRPAEEVGALMELFFSALRREAKRLNENNISLRIIGDRSRFHPELQAAMREAEALTA 127
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N L IA NY + +I++A + + +++++G + D+ L+ L T ++P PDL
Sbjct: 128 GNNRFILQIAANYGGQWDIAQAAQRLAREVQAGHLRPDDITPGLLQTCLATGELPLPDLC 187
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTGGE R+S+FLLWQ+AY+E F YWPDF E AL + R RRFG S++
Sbjct: 188 IRTGGEHRISNFLLWQLAYAELYFSDLYWPDFKHEAMRKALADFASRQRRFGKTSEQ 244
>gi|313124037|ref|YP_004034296.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
gi|312280600|gb|ADQ61319.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
gi|325685952|gb|EGD28015.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus
delbrueckii subsp. lactis DSM 20072]
Length = 243
Score = 287 bits (736), Expect = 6e-76, Method: Composition-based stats.
Identities = 99/240 (41%), Positives = 143/240 (59%), Gaps = 3/240 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M + +H+ IIMDGNGRWA R +PR GH+ G++ +I AA E+GIK LT++AFS
Sbjct: 1 MDKNKQLNHLAIIMDGNGRWAKKRKMPRFMGHKAGMDNVEKIALAADELGIKVLTLYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP E++ L+ L F K L+ +N+KV ++G +L + V++ A +T
Sbjct: 61 TENWARPKDEVNYLMNLPVKFFDKFMPRLQAHNVKVNIMGYLDALPESTREVVERAMAET 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT---SDVPD 181
NTGL L AFNY SR EI A++ + ++ SG + ++ +++ L T + D
Sbjct: 121 AANTGLVLNFAFNYGSRKEIVSAVQALAKEAASGEITPEEITEDMVSAKLMTAKFAPYSD 180
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL+IRT GE+R+S+FLLWQ+AYSE F + WPDF + Y RDRRFG L +
Sbjct: 181 PDLLIRTSGEQRISNFLLWQIAYSELAFTDKAWPDFDENDLAEMVKIYQHRDRRFGKLDE 240
>gi|167752328|ref|ZP_02424455.1| hypothetical protein ALIPUT_00572 [Alistipes putredinis DSM 17216]
gi|167660569|gb|EDS04699.1| hypothetical protein ALIPUT_00572 [Alistipes putredinis DSM 17216]
Length = 243
Score = 287 bits (736), Expect = 6e-76, Method: Composition-based stats.
Identities = 94/234 (40%), Positives = 138/234 (58%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
P H+ IIMDGNGRWAA GL R GH +G+E + AA G++ LT++AFS
Sbjct: 4 QKRIPRHVAIIMDGNGRWAAQHGLERFEGHIRGVESVRRAIQAATRHGVRYLTLYAFSTE 63
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP +E+ L++L + L ++VR+IG++ + + L + E++T
Sbjct: 64 NWGRPAAEVDALMELFCKSIINETPELAAQGVRVRIIGDKSRFPEKVKHHLDQIENRTAT 123
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
L L +A NYSSR EI A++ + + +G ++ +++ L T+ PDPDL+I
Sbjct: 124 GKRLTLQLALNYSSRSEIVHAMQGLARRAAAGIFSPEEISEQTVSEALYTAGCPDPDLLI 183
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RT GE+RLS+FLLWQ AY+E F P WPDF+ E F AL++Y R+RRFG +
Sbjct: 184 RTSGEQRLSNFLLWQAAYAELFFTPVLWPDFTEEDFAQALDEYARRERRFGLVK 237
>gi|56478855|ref|YP_160444.1| undecaprenyl pyrophosphate synthase [Aromatoleum aromaticum EbN1]
gi|56314898|emb|CAI09543.1| Undecaprenyl pyrophosphate synthase [Aromatoleum aromaticum EbN1]
Length = 263
Score = 287 bits (736), Expect = 6e-76, Method: Composition-based stats.
Identities = 99/235 (42%), Positives = 133/235 (56%), Gaps = 3/235 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P HI IIMDGNGRWA R LPR AGH +G+E ++ A E G+ LT+FAFS N
Sbjct: 17 SGVPRHIAIIMDGNGRWARKRFLPRVAGHSRGVESVRSVIRACMERGVSYLTLFAFSSEN 76
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+S L++L L+K L N I+ RVIG+ D ++ +++ AE +T N
Sbjct: 77 WRRPADEVSFLMQLFMRSLQKEVDRLHDNGIRFRVIGDLSRFDPKLVDMIRRAEARTAAN 136
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L L IA NY R +I +A+ + ++ L + P+PDL IR
Sbjct: 137 EKLTLTIAANYGGRWDILQAMTRMLAKHPERR---EGFTEEDLSGELSLNYGPEPDLFIR 193
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE+R+S+FLLWQ+AYSE F WPDF A+ Y R+RRFG S++
Sbjct: 194 TGGEQRISNFLLWQLAYSELYFTDTLWPDFDVAALDEAIRSYQARERRFGRTSEQ 248
>gi|259416390|ref|ZP_05740310.1| undecaprenyl pyrophosphate synthetase 1 [Silicibacter sp.
TrichCH4B]
gi|259347829|gb|EEW59606.1| undecaprenyl pyrophosphate synthetase 1 [Silicibacter sp.
TrichCH4B]
Length = 256
Score = 287 bits (736), Expect = 6e-76, Method: Composition-based stats.
Identities = 107/231 (46%), Positives = 144/231 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA ARG PR GH G E+V +GIK LTIFAFS NW+R
Sbjct: 26 PRHVAIIMDGNGRWAQARGRPRLFGHHAGARRVREVVECCPALGIKYLTIFAFSTENWKR 85
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E++ L+ L + ++ K +L N++VR IG+R+ LD ++ ++ E +T N G
Sbjct: 86 TQVEVAGLMSLFRRYISKEMKALAAKNVRVRFIGDRVRLDTKLVQLMDALEHETEGNDGT 145
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L IA NY RDE++RA + + QD+ G + DVD + +YLDT +PDPDL+IRT G
Sbjct: 146 HLTIALNYGGRDEVARATQRLAQDVADGKLDPADVDQETLPRYLDTHVLPDPDLVIRTSG 205
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E R+S+FLLWQ AYSE+ FI WPDFS + + RDRRFG + K
Sbjct: 206 EARISNFLLWQSAYSEYEFIDTLWPDFSSDELARLCQNFGNRDRRFGAVKK 256
>gi|222148858|ref|YP_002549815.1| undecaprenyl pyrophosphate synthase [Agrobacterium vitis S4]
gi|221735844|gb|ACM36807.1| undecaprenyl pyrophosphate synthase [Agrobacterium vitis S4]
Length = 248
Score = 287 bits (736), Expect = 6e-76, Method: Composition-based stats.
Identities = 125/239 (52%), Positives = 175/239 (73%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ ++ S+ P+H+ IIMDGNGRWA RG+PR GHR+G+E +V A EVG++ LT+F
Sbjct: 1 MTTLDISAVPEHVAIIMDGNGRWANQRGMPRAYGHRQGMEALQTVVRTAGEVGVRYLTLF 60
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP +EI++L L+K+F+++ L+ NN++VR+IG R +L DIL +L EAE
Sbjct: 61 AFSSENWRRPETEITDLFGLLKTFVRRDLAELRANNVRVRIIGERSTLKSDILKLLIEAE 120
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ TR NTG+ + IAFNY +RDE++RA+ + +D+++G + + + I+ LDT+ +PD
Sbjct: 121 ETTRTNTGMTMVIAFNYGARDEMTRAVSALVRDVQAGLLPASAITQEAISARLDTAGIPD 180
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
PDLIIRT GE+RLS+FLLWQ AYSE +F+PEYWPDFSRE F L Y R RRFGGL+
Sbjct: 181 PDLIIRTSGEERLSNFLLWQAAYSELIFVPEYWPDFSRESFLATLELYASRSRRFGGLA 239
>gi|220921530|ref|YP_002496831.1| undecaprenyl diphosphate synthase [Methylobacterium nodulans ORS
2060]
gi|219946136|gb|ACL56528.1| undecaprenyl diphosphate synthase [Methylobacterium nodulans ORS
2060]
Length = 257
Score = 287 bits (736), Expect = 6e-76, Method: Composition-based stats.
Identities = 116/238 (48%), Positives = 162/238 (68%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ P H+ IIMDGNGRWAA RGLPR GHR+G+E V AA ++GI+ LT+++FS
Sbjct: 19 LKRGVPAHVAIIMDGNGRWAARRGLPRAEGHRRGVEAVRRAVRAAIDLGIQYLTVYSFSS 78
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NWRRP SE+++L+ L+K F+++ L N ++VR+IG R L DDI +L+EAE++T
Sbjct: 79 ENWRRPASEVADLMGLLKLFVRRDLADLHANGVRVRIIGERRGLADDIAALLREAEERTA 138
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
NT L L +AFNY R EI RA++ + + ++ G + +D +A LDT +PDPDL+
Sbjct: 139 QNTRLTLVVAFNYGGRQEIVRAVQAMARAVQEGRLSPEAIDLGTVAAALDTQGIPDPDLV 198
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
IRT GE+R+S+FL WQ AYSEFVFI + WPDF F A+ +Y R+RRFGGL+ +
Sbjct: 199 IRTSGEQRVSNFLTWQTAYSEFVFIQDLWPDFDHAAFAAAVGEYQSRERRFGGLTAQA 256
>gi|222054616|ref|YP_002536978.1| undecaprenyl diphosphate synthase [Geobacter sp. FRC-32]
gi|221563905|gb|ACM19877.1| undecaprenyl diphosphate synthase [Geobacter sp. FRC-32]
Length = 249
Score = 287 bits (736), Expect = 6e-76, Method: Composition-based stats.
Identities = 99/236 (41%), Positives = 143/236 (60%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
SS P H+ +IMDGNGRWA + L R GH+KG+E IV +++ I LT+FAFS
Sbjct: 6 KSSLPHHLAVIMDGNGRWAKQQMLKRIVGHQKGVETVRLIVEECSKLEIAYLTLFAFSAE 65
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP +E+ L+ L+K F++ + NNI+ VIGNR L DI + A +T
Sbjct: 66 NWLRPKTEVKALMALLKKFVRSELGRMMSNNIRFNVIGNRTELPADINAEISAAIAKTET 125
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTG+ L +A +Y R EI+ A + I D+ +G++ ++D YL T+ +P+PD +I
Sbjct: 126 NTGMLLTLALSYGGRQEIAGAARKIACDVAAGNIKPEEIDEKTFNNYLYTAAMPEPDFLI 185
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE R+S+FLLWQ+AY+E F WPDF ++ + A + Y R+RRFG S +
Sbjct: 186 RTSGEMRISNFLLWQLAYTELYFSDVNWPDFDKKELYKAFHHYQSRERRFGKTSDQ 241
>gi|89068189|ref|ZP_01155599.1| undecaprenyl diphosphate synthase [Oceanicola granulosus HTCC2516]
gi|89046106|gb|EAR52164.1| undecaprenyl diphosphate synthase [Oceanicola granulosus HTCC2516]
Length = 242
Score = 287 bits (736), Expect = 6e-76, Method: Composition-based stats.
Identities = 106/238 (44%), Positives = 153/238 (64%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+M + S P H+ +IMDGNGRWA RG PR GH G + EIV A ++G+K LTIFAF
Sbjct: 5 TMNTPSGPRHVAVIMDGNGRWAQQRGKPRLFGHHAGAKRVREIVEACPDLGVKYLTIFAF 64
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R SE++ L+ L + ++++ L ++VR IG+R+ LDD ++ ++ + E
Sbjct: 65 STENWKRTQSEVAGLMGLFRRYIEREARDLFNRGVRVRFIGDRIRLDDKLVAMMDDLELL 124
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T N ++L IA NY RDE++RA + + +IE G + DVD+ +A++LDT +PDPD
Sbjct: 125 TSGNDRVHLTIALNYGGRDEVTRAAQRLAVEIEQGRLNHKDVDAETLARFLDTRFLPDPD 184
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
L+IRT GE R+S+FLLWQ AY+E+ FI WPDF+ F + Y RDRRFG +
Sbjct: 185 LVIRTSGEARISNFLLWQSAYAEYEFIDTLWPDFTDAEFARIVGHYAQRDRRFGAVKA 242
>gi|319892275|ref|YP_004149150.1| Undecaprenyl pyrophosphate synthetase [Staphylococcus
pseudintermedius HKU10-03]
gi|317161971|gb|ADV05514.1| Undecaprenyl pyrophosphate synthetase [Staphylococcus
pseudintermedius HKU10-03]
Length = 253
Score = 287 bits (736), Expect = 7e-76, Method: Composition-based stats.
Identities = 96/239 (40%), Positives = 143/239 (59%), Gaps = 1/239 (0%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ ++ + P+HI IIMDGNGRWA R +PR GH +G++ I AA+++G+K LT++
Sbjct: 15 IEALDLRNIPEHIAIIMDGNGRWAKQRKMPRIKGHYQGMQTIKTITRAASDLGVKYLTLY 74
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E++ ++ L +FL L + N++V +G L + + ++EA+
Sbjct: 75 AFSTENWSRPDEEVNYIMGLPVNFLNTFLPELIEKNVRVETVGFIDELPEKTIQAIEEAK 134
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGS-VCSHDVDSSLIAKYLDTSDVP 180
+T NTGL L A NY R EI I+ + +++ S + KYL T D P
Sbjct: 135 IKTADNTGLTLIFAINYGGRAEIVHGIQTLMKEMRHASDQDIDALTEQHFQKYLMTRDYP 194
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DP+L+IRT GE+R+S+FL+WQ++YSEF+F + WPDF E + Y R RRFGGL
Sbjct: 195 DPELLIRTSGEQRVSNFLIWQLSYSEFIFNSKMWPDFDGEELKACIKTYQSRQRRFGGL 253
>gi|50119976|ref|YP_049143.1| undecaprenyl pyrophosphate synthetase [Pectobacterium atrosepticum
SCRI1043]
gi|73920258|sp|Q6D8D8|UPPS_ERWCT RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|49610502|emb|CAG73947.1| undecaprenyl pyrophosphate synthetase [Pectobacterium atrosepticum
SCRI1043]
Length = 253
Score = 287 bits (736), Expect = 7e-76, Method: Composition-based stats.
Identities = 91/230 (39%), Positives = 139/230 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +RG R GH+ G++ V+ A G+ LT++AFS NW R
Sbjct: 17 PRHVAIIMDGNGRWAKSRGKMRIFGHQAGVKAVRRSVSFAVNHGLDALTLYAFSSENWNR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L L SL K+N+++RVIG+ + ++ +E T N GL
Sbjct: 77 PAQEVSALMELFVRALDSEVKSLHKHNVRLRVIGDIGRFSPRLQERIRRSEVLTEKNQGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I + ++ + + ++ G + ++ + + +Y+ +D+ DL+IRTGG
Sbjct: 137 TLNIAANYGGRWDIIQGVRQLAEQVQEGILRPDSINEASLCQYICLNDLAPVDLVIRTGG 196
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E R+S+FLLWQ+AY+E F WPDF ++F ALN + R+RRFGG +
Sbjct: 197 EHRISNFLLWQIAYAELYFTDVLWPDFDEQVFEGALNAFAQRERRFGGTT 246
>gi|254508675|ref|ZP_05120790.1| undecaprenyl pyrophosphate synthetase 1 [Vibrio parahaemolyticus
16]
gi|219548432|gb|EED25442.1| undecaprenyl pyrophosphate synthetase 1 [Vibrio parahaemolyticus
16]
Length = 251
Score = 287 bits (736), Expect = 7e-76, Method: Composition-based stats.
Identities = 93/238 (39%), Positives = 148/238 (62%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P HI IIMDGNGRWA A+G PR GH+ G+ + ++ +A++GIK +T+FAFS
Sbjct: 6 LSPDVLPQHIAIIMDGNGRWAKAQGKPRVFGHKNGVAAVRKAISTSAKLGIKAITLFAFS 65
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRRP E+ L++L + L L KNN+++RVIG+ +D + + +AE+ T
Sbjct: 66 SENWRRPEEEVGVLMELFITVLSTEIKKLHKNNLRLRVIGDTARFNDRLRKKIAQAEELT 125
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NTG+ + IA NY + +I +A K + + +G + + ++ ++ ++L SD+P+ DL
Sbjct: 126 ANNTGMVVNIAANYGGKWDIMQATKALANKVANGELQADEITEEMMTQHLTMSDLPEVDL 185
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IRT GE R+S+F+LWQ+AY+E F P YWP+F A+ + R+RRFG ++
Sbjct: 186 MIRTSGECRISNFMLWQMAYAEMYFTPIYWPEFDENSLVEAVTWFVNRERRFGCTGEQ 243
>gi|194289788|ref|YP_002005695.1| undecaprenyl pyrophosphate synthetase (di-trans,
poly-cis-decaprenylcistransferase) [Cupriavidus
taiwanensis LMG 19424]
gi|193223623|emb|CAQ69630.1| undecaprenyl pyrophosphate synthetase (di-trans,
poly-cis-decaprenylcistransferase) [Cupriavidus
taiwanensis LMG 19424]
Length = 256
Score = 287 bits (736), Expect = 7e-76, Method: Composition-based stats.
Identities = 104/241 (43%), Positives = 147/241 (60%), Gaps = 2/241 (0%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+A +S P H+ IIMDGNGRWA R LPR AGH +G++ +V A A G++ LT+F
Sbjct: 8 LAVPDTSYVPRHVAIIMDGNGRWATQRHLPRVAGHSRGLDAVRAVVEACAARGVQYLTLF 67
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP E+S L++L L++ + NNI++RV+G+ I ++K+AE
Sbjct: 68 AFSSENWRRPADEVSFLMRLFMMSLRREVVKMHANNIRLRVVGDLSRFSPRIQRLIKDAE 127
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T NTGL + IA NY R ++ +A++ + S + +D SL+A +L + P+
Sbjct: 128 ARTAGNTGLTVTIAANYGGRWDLLQAMRKML--ARSPMLDPETIDESLLAPHLAMAYAPE 185
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL IRTGGE+R+S+FLLWQ+AYSE F YWPDF A Y R+RRFG S
Sbjct: 186 PDLFIRTGGEQRISNFLLWQLAYSELYFTDVYWPDFDAAELDKAFASYRQRERRFGRTSA 245
Query: 242 K 242
+
Sbjct: 246 Q 246
>gi|114321010|ref|YP_742693.1| undecaprenyl pyrophosphate synthetase [Alkalilimnicola ehrlichii
MLHE-1]
gi|114227404|gb|ABI57203.1| Undecaprenyl pyrophosphate synthetase [Alkalilimnicola ehrlichii
MLHE-1]
Length = 257
Score = 287 bits (736), Expect = 7e-76, Method: Composition-based stats.
Identities = 98/235 (41%), Positives = 145/235 (61%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
P+H+ IIMDGNGRWA ARGLPR AGHR G +V +GI LT+FAFS N
Sbjct: 15 GPLPEHVAIIMDGNGRWARARGLPRHAGHRAGAATVRRVVEHCGRLGIHALTLFAFSSEN 74
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+S L++L S L K L +N++++R +G R + L +AE TR N
Sbjct: 75 WRRPRKEVSVLMELFLSTLDKESARLHRNDVRLRFMGAREDFPRRLQQRLADAEALTRDN 134
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
TGL L +A +Y R +I+ A + + + +++G + ++ + + K + +++P+PDL IR
Sbjct: 135 TGLQLNVAASYGGRWDIANAARRLAEAVQAGHLQPDEITTETLGKEVCLAELPEPDLFIR 194
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE+R+S+F+LWQ+AY+E F P WP F+ + AL + R+RRFG S +
Sbjct: 195 TGGERRISNFMLWQLAYTELYFTPVLWPAFTTDHLDEALADFAGRERRFGRTSDQ 249
>gi|109897578|ref|YP_660833.1| undecaprenyl diphosphate synthase [Pseudoalteromonas atlantica T6c]
gi|109699859|gb|ABG39779.1| Undecaprenyl pyrophosphate synthetase [Pseudoalteromonas atlantica
T6c]
Length = 246
Score = 287 bits (736), Expect = 7e-76, Method: Composition-based stats.
Identities = 97/233 (41%), Positives = 142/233 (60%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IIMDGNGRWA +G R GHR G++ V+ + + IK LT+FAFS NW
Sbjct: 12 VPQHVAIIMDGNGRWAKKKGKIRTFGHRAGVKGVRASVSFSLKNNIKVLTLFAFSSENWN 71
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ L++L K L L KNN+K+RVIG+ D ++ +++AE T N G
Sbjct: 72 RPQEEVGVLMELFKMVLSSEVKKLHKNNVKLRVIGDTSRFDKKLVAQIQDAETLTENNDG 131
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L IA NY R +I A K + + ++ G++ +D +++ Y +D+P+ DL+IRTG
Sbjct: 132 LILNIAANYGGRWDILNAAKTLAEQVKEGALECEQIDEAMLNSYTCCADLPELDLLIRTG 191
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE R+S+FLLWQVAY+E F YWPDF+ + F A++ + R RR+G ++
Sbjct: 192 GETRISNFLLWQVAYAELYFTDTYWPDFNEDAFQLAIDNFADRQRRYGMTGEQ 244
>gi|119774280|ref|YP_927020.1| di-trans,poly-cis-decaprenylcistransferase [Shewanella amazonensis
SB2B]
gi|119766780|gb|ABL99350.1| Undecaprenyl pyrophosphate synthetase [Shewanella amazonensis SB2B]
Length = 266
Score = 287 bits (736), Expect = 7e-76, Method: Composition-based stats.
Identities = 97/241 (40%), Positives = 151/241 (62%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
V+ +++ S P H+ IIMDGNGRWA A+G PR GH+ G++ V+ A+++GIK+LT+F
Sbjct: 20 VSGLVNQSLPQHVAIIMDGNGRWAQAQGKPRVMGHKAGVKAVRRAVSTASQLGIKSLTLF 79
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP +E+S L++L + LK+ L KN +++ +IG+ D + +++AE
Sbjct: 80 AFSSENWRRPDAEVSLLMELFFTVLKREIKLLSKNGVRLNIIGDTSRFSDRLQQQIRDAE 139
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T NTGL L +A NY R +I +A + + Q + SG + S ++++L +
Sbjct: 140 EKTAANTGLILNVAANYGGRWDILQAAQQLAQKLASGEIDSSQFTEEALSQHLCMQSQGE 199
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRTGG+ R+S+F+LWQ AY+E VF WPDF + F A+ + R RRFG
Sbjct: 200 VDLMIRTGGDYRISNFVLWQAAYAELVFTDTLWPDFDEQCFKEAIALFASRQRRFGLTGS 259
Query: 242 K 242
+
Sbjct: 260 Q 260
>gi|304391649|ref|ZP_07373591.1| undecaprenyl pyrophosphate synthetase 1 [Ahrensia sp. R2A130]
gi|303295878|gb|EFL90236.1| undecaprenyl pyrophosphate synthetase 1 [Ahrensia sp. R2A130]
Length = 276
Score = 287 bits (736), Expect = 7e-76, Method: Composition-based stats.
Identities = 118/239 (49%), Positives = 161/239 (67%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
S + P H+ IIMDGNGRWA ARGL R GHRKG+E V AA E+GI+ LT+F+
Sbjct: 29 GSTRAPGVPKHVAIIMDGNGRWAQARGLHRSRGHRKGVEAVRATVRAAGELGIETLTLFS 88
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RP +EI+EL++L+K F+++ L K N+++ +IG+R + DIL +L EA
Sbjct: 89 FSSENWNRPAAEINELMRLLKIFIRRDLADLHKENVRISIIGSRDGVPSDILPLLDEAVA 148
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
TR NT L IAFNY +RDE++RA + I + + +G++ +V IA ++DT+ DP
Sbjct: 149 LTRNNTRTRLVIAFNYGARDELARATQRIAEAVAAGTLDPSEVTQDTIAAHMDTAGWSDP 208
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
+LIIRT GEKRLS+FLLWQ AYSEFVF+ WP+F + A+ +Y RDRRFGGL+
Sbjct: 209 ELIIRTSGEKRLSNFLLWQAAYSEFVFVDCMWPEFDKAQLEAAIGEYVSRDRRFGGLAD 267
>gi|269101943|ref|ZP_06154640.1| undecaprenyl pyrophosphate synthetase [Photobacterium damselae
subsp. damselae CIP 102761]
gi|268161841|gb|EEZ40337.1| undecaprenyl pyrophosphate synthetase [Photobacterium damselae
subsp. damselae CIP 102761]
Length = 254
Score = 287 bits (736), Expect = 7e-76, Method: Composition-based stats.
Identities = 93/239 (38%), Positives = 141/239 (58%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + S P HI IIMDGNGRWA A+G R GH+ G+E + V+ A +GIK +T+FAF
Sbjct: 9 ELCADSLPKHIAIIMDGNGRWAQAKGKARVFGHKAGVEAVRKAVSTANRLGIKAVTLFAF 68
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRRP E+S L++L + L + L KN+IK++++G++ + + AE
Sbjct: 69 SSENWRRPEDEVSLLMELFITVLGREVKRLHKNSIKLKILGDKSRFSQRLQDKIASAEAL 128
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NTG+ L +A NY + +I +A K Q + + + +I+ L T+ PD D
Sbjct: 129 TENNTGMVLNVAANYGGQWDILQATKKAMQKLIEQGLEPDSMTEEMISAELSTAGEPDVD 188
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRT GE R+S+F+LWQ AY+E F ++WPDF + A+ + R+RRFG ++
Sbjct: 189 LLIRTSGECRISNFMLWQTAYAELYFTEQHWPDFDEQSLTDAIAWFVTRERRFGCTGEQ 247
>gi|14520788|ref|NP_126263.1| hypothetical protein PAB0394 [Pyrococcus abyssi GE5]
gi|13633995|sp|Q9V157|UPPS_PYRAB RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|5458004|emb|CAB49494.1| uppS probable undecaprenyl pyrophosphate synthetase (EC 2.5.1.31)
[Pyrococcus abyssi GE5]
Length = 264
Score = 287 bits (736), Expect = 7e-76, Method: Composition-based stats.
Identities = 88/240 (36%), Positives = 138/240 (57%), Gaps = 2/240 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + + P H+ IIMDGN RWA R P GH G + EI+ E+GI+ LT+
Sbjct: 25 LLEKVKAGVLPKHVAIIMDGNRRWAKKREKPPWYGHLFGSKKLEEILEWCHELGIRILTV 84
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFS N++R E+ L++L + ++ + + ++V VIG + L + +
Sbjct: 85 YAFSTENFKRSKEEVERLMQLFEQKFRELVTDKRVHEYGVRVNVIGRKELLPKSVRDAAE 144
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
EAE TR L +A Y R EI A+K+I +D+ G + D+D L+ KYL +
Sbjct: 145 EAERATRKYNNYVLNVAIAYGGRSEIVDAVKDIVRDVMDGKLRVEDIDEELLKKYLYVPN 204
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+PDPD++IRTGGE R+S+FLL+Q+AYSE F+ Y+P+F + F + ++ R+RRFG
Sbjct: 205 MPDPDIVIRTGGEVRISNFLLYQIAYSELFFVDVYFPEFRKIDFLRIIREFQKRERRFGR 264
>gi|85703598|ref|ZP_01034702.1| undecaprenyl diphosphate synthase [Roseovarius sp. 217]
gi|85672526|gb|EAQ27383.1| undecaprenyl diphosphate synthase [Roseovarius sp. 217]
Length = 247
Score = 287 bits (736), Expect = 7e-76, Method: Composition-based stats.
Identities = 110/238 (46%), Positives = 147/238 (61%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + P H+ IIMDGNGRWA RG PR GH G EIV + +G+K LTI
Sbjct: 7 MAGKSSPTEGPRHVAIIMDGNGRWAQKRGRPRLFGHHAGARRVREIVQSCPGLGVKYLTI 66
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW+R +E++ L+ L + ++ K + N++VR IG+R LD + ++ EA
Sbjct: 67 FAFSTENWKRTQTEVAGLMSLFRRYIMKEMQEFVRENVQVRFIGDRPRLDAKLRNLMDEA 126
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E T TG NL IA NY RDE+SRA K + D+ G + DV+ + +YLDT +P
Sbjct: 127 EAMTAHCTGTNLTIALNYGGRDEVSRATKRLAIDVAEGRLRPEDVNEETLPRYLDTYVLP 186
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DPDL+IRT GE R+S+FLLWQ AY+E+ FI WPDF+ ++F L+QY RDRRFG
Sbjct: 187 DPDLVIRTSGEARISNFLLWQSAYAEYEFIDTLWPDFTPDVFARLLSQYGSRDRRFGA 244
>gi|299783103|gb|ADJ41101.1| Undecaprenyl diphosphate synthase [Lactobacillus fermentum CECT
5716]
Length = 255
Score = 287 bits (736), Expect = 7e-76, Method: Composition-based stats.
Identities = 100/241 (41%), Positives = 150/241 (62%), Gaps = 3/241 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ S P H+ IIMDGNGRWA +R LPR AGH++G++ ++ AA+++GIK LT++AFS
Sbjct: 15 LDRSRVPHHVAIIMDGNGRWAQSRHLPRVAGHQQGMQTVKKVTMAASDLGIKALTLYAFS 74
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP +E+ L++L F L +N++V V+G+ L ++ A D T
Sbjct: 75 TENWKRPSTEVKFLMQLPIRFFNTFVPDLVAHNVRVMVMGDTTKLPAGTQKAVQGALDAT 134
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV---PD 181
+ TG+ L A NY RDEI RA + + + + +G + + LI++ + T+ + D
Sbjct: 135 KDCTGMVLNFALNYGGRDEIVRATQAVAKXVAAGELTPDAISEELISREMMTAPLGQFAD 194
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
P++IIRT GE+RLS+F+LWQ AYSE VF+ E+WPDF + AL + R RRFGGL+
Sbjct: 195 PEVIIRTSGEERLSNFMLWQAAYSELVFVDEHWPDFDGDSLKRALATFQSRHRRFGGLNN 254
Query: 242 K 242
K
Sbjct: 255 K 255
>gi|254464147|ref|ZP_05077558.1| undecaprenyl pyrophosphate synthetase 1 [Rhodobacterales bacterium
Y4I]
gi|206685055|gb|EDZ45537.1| undecaprenyl pyrophosphate synthetase 1 [Rhodobacterales bacterium
Y4I]
Length = 252
Score = 287 bits (736), Expect = 7e-76, Method: Composition-based stats.
Identities = 105/234 (44%), Positives = 148/234 (63%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ S P H+ IIMDGNGRWA ARG PR GH G E+V +G++ LTIFAFS
Sbjct: 18 ARSGPRHVAIIMDGNGRWAQARGRPRLFGHHAGARRVREVVECCPSLGVEYLTIFAFSTE 77
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW+R +E++ L+ L + ++ K +L + N++VR IG+R+ LD ++ ++ + E +T
Sbjct: 78 NWKRTQTEVAGLMSLFRRYISKEMNALAEKNVRVRFIGDRVRLDAKLIDLMDKLERKTEG 137
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N+G L IA NY RDE++RA K + +D+ G + DVD + +YLDT +PDPDL+I
Sbjct: 138 NSGTQLTIALNYGGRDEVARATKRLARDVAEGRLDPEDVDEETLPRYLDTHVLPDPDLVI 197
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RT GE R+S+FLLWQ AY+E+ FI WPDF+ E Y RDRRFG +
Sbjct: 198 RTSGEARISNFLLWQSAYAEYEFIDTLWPDFTAEELARLCGSYGRRDRRFGAVK 251
>gi|257876616|ref|ZP_05656269.1| undecaprenyl pyrophosphate synthetase [Enterococcus casseliflavus
EC20]
gi|257810782|gb|EEV39602.1| undecaprenyl pyrophosphate synthetase [Enterococcus casseliflavus
EC20]
Length = 266
Score = 287 bits (735), Expect = 7e-76, Method: Composition-based stats.
Identities = 102/238 (42%), Positives = 145/238 (60%), Gaps = 4/238 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HI IIMDGNGRWA R LPR AGH++G+E +I A+ +G+K LT++AFS NW
Sbjct: 25 PIPQHIAIIMDGNGRWAQNRRLPRVAGHKEGMETVKKITKHASHLGVKVLTLYAFSTENW 84
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP E+ L++L F L K N++V+V+G SL + +K A DQT+ NT
Sbjct: 85 KRPNEEVDFLMQLPVDFFDTFVPELIKENVQVKVMGFTESLPEHTQEAVKRAIDQTKDNT 144
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDL 184
G+ L A NY SR EI A++ +++++ + + ++A +L T +P DP+L
Sbjct: 145 GMILNFALNYGSRAEILTAVQALYEELAASEEALPKLTEDMLATHLMTGFLPNALRDPEL 204
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IRT GE+R+S+FLLWQ+AYSE F WPDF L A+ + R+RRFGGL K
Sbjct: 205 VIRTSGEERISNFLLWQIAYSELFFTKALWPDFDAALLEDAIGSFQQRNRRFGGLKTK 262
>gi|302036856|ref|YP_003797178.1| undecaprenyl pyrophosphate synthase [Candidatus Nitrospira
defluvii]
gi|190343271|gb|ACE75659.1| undecaprenyl pyrophosphate synthase [Candidatus Nitrospira
defluvii]
gi|300604920|emb|CBK41253.1| Undecaprenyl pyrophosphate synthase [Candidatus Nitrospira
defluvii]
Length = 261
Score = 287 bits (735), Expect = 7e-76, Method: Composition-based stats.
Identities = 97/239 (40%), Positives = 146/239 (61%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+++ + P H+ +IMDGNGRWA RGLPR AGH++GI+ E+++ + E+GIK LTI
Sbjct: 17 LLSQLEPDLLPKHLAVIMDGNGRWAELRGLPRIAGHQEGIKSVRELISLSLELGIKVLTI 76
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP EI+ L+ L++ +L SL + ++ + IG +L L ++
Sbjct: 77 YAFSQENWNRPAQEITALMGLLEHYLSTERSSLVEKGVRFQTIGRVTALPPSALQWVRTT 136
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E +T L L +A +Y R E+ A K + + ++SG + +D + + L T ++P
Sbjct: 137 EQETAHLDKLILNVALSYGGRAELVDAAKELARAVQSGRLSPDQIDEQAMQRALYTHNLP 196
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRT GE R+S+FLLWQ+AY+E F P WPDF R AL +Y R+RRFG +
Sbjct: 197 DPDLLIRTSGETRISNFLLWQLAYTELYFTPTLWPDFRRRETLVALIEYQRRERRFGRV 255
>gi|254302824|ref|ZP_04970182.1| uppS gene product [Fusobacterium nucleatum subsp. polymorphum ATCC
10953]
gi|148323016|gb|EDK88266.1| uppS gene product [Fusobacterium nucleatum subsp. polymorphum ATCC
10953]
Length = 230
Score = 287 bits (735), Expect = 7e-76, Method: Composition-based stats.
Identities = 99/235 (42%), Positives = 141/235 (60%), Gaps = 7/235 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M + P HI IIMDGNGRWA RGL R GH +G + + + E+G+K LT++AFS
Sbjct: 1 MERNIPHHIAIIMDGNGRWAKKRGLARSFGHMEGAKTLRKALEYLTEIGVKYLTVYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+S L+KL ++K ++ KN I+ V G + ++ + + +++ E++T+
Sbjct: 61 ENWNRPQDEVSTLMKLFLKYIKNERKNMMKNKIRFFVSGRKNNIPEKLQKEIEKLEEETK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N + L IAFNY SR EI A+ I +D + ++ AKYL +D PDPDL+
Sbjct: 121 NNDKITLNIAFNYGSRAEIVDAVNKIIEDGKV------NITEEDFAKYLY-NDFPDPDLV 173
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IRT GE R+S+FLLWQ+AYSE WPDF + A+ YN R+RRFGG+
Sbjct: 174 IRTSGEMRISNFLLWQIAYSELYITDTLWPDFDEKEIDKAIESYNQRERRFGGVK 228
>gi|126659957|ref|ZP_01731080.1| Di-trans-poly-cis-decaprenylcistransferase [Cyanothece sp. CCY0110]
gi|126618722|gb|EAZ89468.1| Di-trans-poly-cis-decaprenylcistransferase [Cyanothece sp. CCY0110]
Length = 259
Score = 287 bits (735), Expect = 7e-76, Method: Composition-based stats.
Identities = 97/236 (41%), Positives = 145/236 (61%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ +S P H+ +IMDGNGRWA +GLPR GHR+G + ++ ++GI LT +AF
Sbjct: 12 NLDFNSLPHHVAVIMDGNGRWATQQGLPRITGHRQGAKTLKNLLRCCYDLGIGELTAYAF 71
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRRP EI+ L+ L + LK+ L + +I++ IG+ L + ++ + ++
Sbjct: 72 STENWRRPSEEINFLMLLFEQLLKQELEQLHRESIRISFIGDLSILPSSLQQIMALSREK 131
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N L+ +A NY SR EI A + I Q + G++ +D ++ +YL TS+ DPD
Sbjct: 132 TQKNQALHFRLAINYGSRQEIVHACRQIVQQVHQGNLTLETLDEAVFQQYLSTSEGSDPD 191
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
L+IRT GE RLS++LLWQ+AY+E F +WPDFS F+ AL Y R+RRFG L
Sbjct: 192 LLIRTSGEMRLSNYLLWQMAYTEIYFTDVFWPDFSPSHFYEALWHYQQRNRRFGRL 247
>gi|300813706|ref|ZP_07094026.1| di-trans,poly-cis-decaprenylcistransferase [Peptoniphilus sp. oral
taxon 836 str. F0141]
gi|300512163|gb|EFK39343.1| di-trans,poly-cis-decaprenylcistransferase [Peptoniphilus sp. oral
taxon 836 str. F0141]
Length = 241
Score = 287 bits (735), Expect = 8e-76, Method: Composition-based stats.
Identities = 98/231 (42%), Positives = 151/231 (65%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P HIGIIMDGNGRWA ++ LPR GH+ G + +IV A+ E+G+K+L+++AFS NW
Sbjct: 11 NIPKHIGIIMDGNGRWAKSKNLPRSFGHKAGSDRVIDIVEASYELGVKSLSLYAFSTENW 70
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP EIS+L++LIK +++ + KNN+++ V G+ L + + + A ++T+ N
Sbjct: 71 KRPRDEISKLMELIKYYIRTQLAKINKNNVRINVFGDIEPLPESVKNEILVAVEKTKTND 130
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+NL I NY +DEI RA KNI +D+ G + + D++ + +L + DL+IR
Sbjct: 131 KMNLNICLNYGGQDEILRACKNISKDVLDGKITTEDINKEIFDSHLYSKGQDSLDLLIRP 190
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE R+S+F+LWQ+AY+EF F WPDF++E + A+ Y RDRR+GGL
Sbjct: 191 SGELRVSNFMLWQLAYAEFYFSNILWPDFTKEELYKAIYSYQNRDRRYGGL 241
>gi|256027753|ref|ZP_05441587.1| undecaprenyl pyrophosphate synthetase [Fusobacterium sp. D11]
gi|289765710|ref|ZP_06525088.1| undecaprenyl pyrophosphate synthetase [Fusobacterium sp. D11]
gi|289717265|gb|EFD81277.1| undecaprenyl pyrophosphate synthetase [Fusobacterium sp. D11]
Length = 230
Score = 287 bits (735), Expect = 8e-76, Method: Composition-based stats.
Identities = 98/235 (41%), Positives = 143/235 (60%), Gaps = 7/235 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M + P+HI IIMDGNGRWA RGL R GH +G ++ + + E+G+K LT++AFS
Sbjct: 1 MEKNIPNHIAIIMDGNGRWAKKRGLARSFGHMEGAKILRKALEYLTEIGVKYLTVYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+S L+KL ++K ++ KN I+ V G + ++ + + +++ E++T+
Sbjct: 61 ENWNRPQDEVSTLMKLFLKYIKSERKNMMKNKIRFFVSGRKNNVPEKLQKEIEKLEEETK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N + L IAFNY SR EI A+ I +D + ++ +KYL +D PDPDL+
Sbjct: 121 NNDKITLNIAFNYGSRAEIVDAVNRIIKDGK------ENITEEDFSKYLY-NDFPDPDLV 173
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IRT GE R+S+FLLWQ+AYSE WPDF + A+ YN R+RRFGG+
Sbjct: 174 IRTSGEMRVSNFLLWQIAYSELYITDTLWPDFDEKEIDKAIESYNQRERRFGGVK 228
>gi|224025260|ref|ZP_03643626.1| hypothetical protein BACCOPRO_01997 [Bacteroides coprophilus DSM
18228]
gi|224018496|gb|EEF76494.1| hypothetical protein BACCOPRO_01997 [Bacteroides coprophilus DSM
18228]
Length = 243
Score = 287 bits (735), Expect = 8e-76, Method: Composition-based stats.
Identities = 100/239 (41%), Positives = 147/239 (61%), Gaps = 2/239 (0%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P HI IIMDGNGRWA RG R GH+ G E + I AA +G+K LT++ F
Sbjct: 6 QIDKTRIPSHIAIIMDGNGRWAKQRGQIRTFGHQAGAETVHVIAEEAARLGVKYLTLYTF 65
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RPV E++ L+ L+ +++ + KNNI R+IG+ L +++L L ++
Sbjct: 66 STENWNRPVDEVAALMSLLMDSIEEE--TFMKNNISFRIIGDTSKLPENVLERLNRCIER 123
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T +NTG+ L +A +YSS+ EI+ A++ I + +G + + ++ + +L T +PDPD
Sbjct: 124 TSVNTGMCLTLALSYSSKWEITEAVRQIASRVFAGDLKADEITDQTVDGFLATHYMPDPD 183
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRTGGE RLS+FLLWQ AYSE F +WPDF E A+ Y R+RRFG S++
Sbjct: 184 LLIRTGGEVRLSNFLLWQCAYSELYFCDTFWPDFKAEELCKAICDYQRRERRFGKTSEQ 242
>gi|126666176|ref|ZP_01737156.1| undecaprenyl diphosphate synthase [Marinobacter sp. ELB17]
gi|126629498|gb|EBA00116.1| undecaprenyl diphosphate synthase [Marinobacter sp. ELB17]
Length = 255
Score = 287 bits (735), Expect = 8e-76, Method: Composition-based stats.
Identities = 100/242 (41%), Positives = 145/242 (59%), Gaps = 2/242 (0%)
Query: 3 ASMMSSSP--PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
A++ S+P P H+ +IMDGN RWA AR L AGH+ G++ +V A G+K +T+
Sbjct: 7 AAIPESAPSRPKHVAVIMDGNNRWAKARHLAGVAGHKAGVDAVRAVVETCAREGVKVVTL 66
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NWRRP E+S L+KL L++ L +NNI +R+IG R + + ++ +A
Sbjct: 67 FAFSSENWRRPQDEVSALMKLFVFALEREVRKLHRNNICLRLIGERSAFSPLLQNLMAKA 126
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E T NT + L IA NY + +I+ A + I + SG + D+ LI +L D+P
Sbjct: 127 ETLTADNTAMTLVIAANYGGQWDITEATRKIAGKVASGQLQPSDITEDLIQNHLSLGDLP 186
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
PDL+IRT GE+R+S+F+LW +AY+EF F P +WPDF + AL Y R RRFG
Sbjct: 187 MPDLMIRTAGEQRISNFMLWHLAYTEFYFSPVFWPDFKQPQMQEALAAYAARQRRFGQTD 246
Query: 241 KK 242
++
Sbjct: 247 EQ 248
>gi|254670406|emb|CBA05957.1| undecaprenyl pyrophosphate synthetase [Neisseria meningitidis
alpha153]
gi|325203307|gb|ADY98760.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis
M01-240355]
Length = 248
Score = 287 bits (735), Expect = 8e-76, Method: Composition-based stats.
Identities = 97/240 (40%), Positives = 144/240 (60%), Gaps = 6/240 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + ++ P HI +IMDGNGRWA R LPR GH++G++ +V A++G++ LT+FA
Sbjct: 7 AVLEHTAIPKHIAVIMDGNGRWAKKRFLPRIMGHKRGLDALENMVKHCAKLGVQYLTVFA 66
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP E+S L+ L L+K L +NN++++++G+R IL ++EAE
Sbjct: 67 FSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNMRLKILGSRERFSRQILKGIEEAEA 126
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTGL L IA +Y R +I +A + + ++ +AK+L + P+P
Sbjct: 127 LTANNTGLTLSIAADYGGRWDILQAANKLIAEGV------SEITEDTLAKHLMLGNAPEP 180
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL IRTGGE R+S+FLLWQ+AY+E F WPDF A+ + R+RRFG S++
Sbjct: 181 DLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDETALDAAVASFQKRERRFGRTSEQ 240
>gi|167032163|ref|YP_001667394.1| undecaprenyl diphosphate synthase [Pseudomonas putida GB-1]
gi|166858651|gb|ABY97058.1| undecaprenyl diphosphate synthase [Pseudomonas putida GB-1]
Length = 251
Score = 287 bits (735), Expect = 9e-76, Method: Composition-based stats.
Identities = 97/237 (40%), Positives = 146/237 (61%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ SS P H+ IIMDGN RWA R LP AGH+ G++ ++ A+ G++ LT+FAFS
Sbjct: 8 VPSSVPRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAKSGVEVLTLFAFSS 67
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP E+ L++L S L++ L +NNI +R+IG+R ++ ++EAE T
Sbjct: 68 ENWQRPAEEVGALMELFFSALRREAKRLNENNISLRIIGDRSRFHPELQAAMREAEAVTA 127
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N L IA NY + +I++A + + +++++G + D+ L+ L T ++P PDL
Sbjct: 128 GNNRFILQIAANYGGQWDIAQAAQRLAREVQAGHLRPEDITPGLLQACLATGELPLPDLC 187
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTGGE R+S+FLLWQ+AY+E F YWPDF E +AL + R RRFG S++
Sbjct: 188 IRTGGEHRISNFLLWQLAYAELYFSDLYWPDFKHEAMRNALADFASRQRRFGKTSEQ 244
>gi|227514717|ref|ZP_03944766.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus fermentum
ATCC 14931]
gi|260662306|ref|ZP_05863202.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus fermentum
28-3-CHN]
gi|227086921|gb|EEI22233.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus fermentum
ATCC 14931]
gi|260553689|gb|EEX26581.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus fermentum
28-3-CHN]
Length = 257
Score = 287 bits (735), Expect = 9e-76, Method: Composition-based stats.
Identities = 100/241 (41%), Positives = 150/241 (62%), Gaps = 3/241 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ S P H+ IIMDGNGRWA +R LPR AGH++G++ ++ AA+++GIK LT++AFS
Sbjct: 17 LDRSRVPHHVAIIMDGNGRWAQSRHLPRVAGHQQGMQTVKKVTMAASDLGIKALTLYAFS 76
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP +E+ L++L F L +N++V V+G+ L ++ A D T
Sbjct: 77 TENWKRPSTEVKFLMQLPIRFFNTFVPDLVAHNVRVMVMGDTTKLPAGTQKAVQGALDAT 136
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV---PD 181
+ TG+ L A NY RDEI RA + + + + +G + + LI++ + T+ + D
Sbjct: 137 KDCTGMVLNFALNYGGRDEIVRATQAVAKRVATGELTPDAISEELISREMMTAPLGQFAD 196
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
P++IIRT GE+RLS+F+LWQ AYSE VF+ E+WPDF + AL + R RRFGGL+
Sbjct: 197 PEVIIRTSGEERLSNFMLWQAAYSELVFVDEHWPDFDGDSLKRALATFQSRHRRFGGLNN 256
Query: 242 K 242
K
Sbjct: 257 K 257
>gi|71735344|ref|YP_275974.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|257487080|ref|ZP_05641121.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv. tabaci
ATCC 11528]
gi|289626031|ref|ZP_06458985.1| undecaprenyl pyrophosphate synthetase [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|289651452|ref|ZP_06482795.1| undecaprenyl pyrophosphate synthetase [Pseudomonas syringae pv.
aesculi str. 2250]
gi|298488336|ref|ZP_07006368.1| Undecaprenyl pyrophosphate synthetase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|71555897|gb|AAZ35108.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|298157158|gb|EFH98246.1| Undecaprenyl pyrophosphate synthetase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|330867587|gb|EGH02296.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|330894597|gb|EGH27258.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv. mori
str. 301020]
gi|330985112|gb|EGH83215.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331009285|gb|EGH89341.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 251
Score = 287 bits (735), Expect = 9e-76, Method: Composition-based stats.
Identities = 94/241 (39%), Positives = 147/241 (60%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + SS P H+ IIMDGN RWA R LP AGH+ G++ ++ AE ++ LT+F
Sbjct: 4 IKPAVPSSVPRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAEAKVEVLTLF 63
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E+ L++L + L++ L +N+I +R+IG+R ++ ++EAE
Sbjct: 64 AFSSENWQRPAEEVGALMELFFTALRRETKRLNENDISLRIIGDRSRFHPELQAAMREAE 123
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T N+ L IA NY + +I++A + + +++++G + D+ L+ L T D+P
Sbjct: 124 VRTSGNSRFVLQIAANYGGQWDIAQAAQRLAREVQAGHLQPEDITPELLQTCLATGDLPL 183
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL IRTGGE R+S+FLLWQ+AY+E F +WPDF + AL + R RRFG S+
Sbjct: 184 PDLCIRTGGEHRISNFLLWQLAYAELYFSDLFWPDFKHDAMRAALADFASRQRRFGKTSE 243
Query: 242 K 242
+
Sbjct: 244 Q 244
>gi|83942311|ref|ZP_00954772.1| undecaprenyl diphosphate synthase [Sulfitobacter sp. EE-36]
gi|83955547|ref|ZP_00964178.1| undecaprenyl diphosphate synthase [Sulfitobacter sp. NAS-14.1]
gi|83840191|gb|EAP79366.1| undecaprenyl diphosphate synthase [Sulfitobacter sp. NAS-14.1]
gi|83846404|gb|EAP84280.1| undecaprenyl diphosphate synthase [Sulfitobacter sp. EE-36]
Length = 247
Score = 287 bits (735), Expect = 9e-76, Method: Composition-based stats.
Identities = 105/232 (45%), Positives = 148/232 (63%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ IIMDGNGRWA RG PR GH G + EIV A + G++ LTIFAFS NW
Sbjct: 15 GAPRHVAIIMDGNGRWATQRGRPRLFGHHAGAKRVREIVEACPDFGVEYLTIFAFSTENW 74
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+R E++ L+ L + ++ K +LK ++VR IG+R+ LD ++ ++ E +T NT
Sbjct: 75 KRTQVEVAGLMSLFRRYITKETKALKAKGVRVRFIGDRVRLDAKLVKLMNVLEAETAENT 134
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+L IA NY RDE++RA + + QD+ +G + DVD + +YLDT +PDPDL+IRT
Sbjct: 135 RTHLTIALNYGGRDEVARATQRLAQDVAAGLLSPEDVDEETLPRYLDTHVLPDPDLVIRT 194
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
GE R+S+FLLWQ AY+E+ FI WPDF++ F + + RDRRFG +S
Sbjct: 195 SGEARISNFLLWQSAYAEYEFIDTLWPDFTKAEFGNLCAAFGNRDRRFGAVS 246
>gi|323495358|ref|ZP_08100436.1| undecaprenyl pyrophosphate synthase [Vibrio brasiliensis LMG 20546]
gi|323310429|gb|EGA63615.1| undecaprenyl pyrophosphate synthase [Vibrio brasiliensis LMG 20546]
Length = 251
Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats.
Identities = 94/240 (39%), Positives = 146/240 (60%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ + P HI IIMDGNGRWA A+G PR GH+ G+ + ++ +A++GIK +T+FA
Sbjct: 4 SQLSPDLLPKHIAIIMDGNGRWAKAQGKPRVFGHKNGVAAVRKAISTSAKLGIKAITLFA 63
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP E+ L++L + L L KNN+++RVIG+ + + + +AE
Sbjct: 64 FSSENWRRPEEEVGVLMELFITVLSTEVKKLHKNNLRLRVIGDTSRFNQRLQSKIAQAEA 123
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTG+ + IA NY + +I +A K I + +G + ++ LI ++L +D+P+
Sbjct: 124 MTESNTGMVINIAANYGGKWDIMQATKAISAKVAAGELNCDEISEELITEHLTMADLPEV 183
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL+IRT GE R+S+F+LWQ+AY+E F P YWP+F A+ + R+RRFG ++
Sbjct: 184 DLMIRTSGECRISNFMLWQMAYAEMYFTPIYWPEFDENSLIEAVTWFVNRERRFGCTGEQ 243
>gi|153812432|ref|ZP_01965100.1| hypothetical protein RUMOBE_02831 [Ruminococcus obeum ATCC 29174]
gi|149831594|gb|EDM86681.1| hypothetical protein RUMOBE_02831 [Ruminococcus obeum ATCC 29174]
Length = 238
Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats.
Identities = 106/238 (44%), Positives = 158/238 (66%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M + P+HI II+DGNGRWA A+G+PR GH KG +I ++G+K LT++AFS
Sbjct: 1 MENMKVPNHIAIILDGNGRWAKAKGMPRGYGHIKGCANLEQICYDIKDLGVKYLTVYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+R E+ L+KL +S+LKK S +KN+++V++IG+ + D DI +++ E+ +
Sbjct: 61 TENWKRSREEVEGLMKLFRSYLKKCMKSAEKNHMRVKIIGDPTAFDQDIQDKIRKLEEFS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ L IA NY SRDEI+R ++ + QD G + ++ I+ YLDT+ VPDPDL
Sbjct: 121 KDYDELYFQIALNYGSRDEITRGMRKLAQDAADGRLNPQEITEDTISGYLDTAGVPDPDL 180
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IRT GE+RLS+FL+WQ+AY+EF F WPDF +E A+ +YN RDRR+GG+ ++
Sbjct: 181 LIRTSGEQRLSNFLMWQLAYTEFYFTDVAWPDFHKEDLIRAIEKYNGRDRRYGGVKEE 238
>gi|104783191|ref|YP_609689.1| undecaprenyl diphosphate synthase [Pseudomonas entomophila L48]
gi|95112178|emb|CAK16905.1| undecaprenyl diphosphate synthase [Pseudomonas entomophila L48]
Length = 251
Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats.
Identities = 97/236 (41%), Positives = 145/236 (61%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
SS P H+ IIMDGN RWA R LP AGH+ G++ ++ A+ G++ LT+FAFS
Sbjct: 9 PSSVPRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAQSGVEVLTLFAFSSE 68
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW+RP E+ L++L S L++ L +NNI +R+IG+R ++ ++EAE T
Sbjct: 69 NWQRPAEEVGALMELFFSALRREAKRLNENNISLRIIGDRSRFHPELQAAMREAEALTAG 128
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N L IA NY + +I++A + + +++++G + D+ L+ L T D+P PDL I
Sbjct: 129 NNRFILQIAANYGGQWDIAQAAQRLAREVQAGHLRPDDITPDLLQACLATGDLPLPDLCI 188
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE+R+S+FLLWQ+AY+E F +WPDF E AL + R RRFG S++
Sbjct: 189 RTGGERRISNFLLWQLAYAELYFSDLFWPDFKHEAMRTALADFASRQRRFGKTSEQ 244
>gi|320323116|gb|EFW79205.1| undecaprenyl pyrophosphate synthetase [Pseudomonas syringae pv.
glycinea str. B076]
gi|320329612|gb|EFW85601.1| undecaprenyl pyrophosphate synthetase [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330878175|gb|EGH12324.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 252
Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats.
Identities = 94/241 (39%), Positives = 147/241 (60%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + SS P H+ IIMDGN RWA R LP AGH+ G++ ++ AE ++ LT+F
Sbjct: 4 IKPAVPSSVPRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAEAKVEVLTLF 63
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E+ L++L + L++ L +N+I +R+IG+R ++ ++EAE
Sbjct: 64 AFSSENWQRPAEEVGALMELFFTALRRETKRLNENDISLRIIGDRSRFHPELQAAMREAE 123
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T N+ L IA NY + +I++A + + +++++G + D+ L+ L T D+P
Sbjct: 124 VRTSGNSRFVLQIAANYGGQWDIAQAAQRLAREVQAGHLQPEDITPELLQTCLATGDLPL 183
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL IRTGGE R+S+FLLWQ+AY+E F +WPDF + AL + R RRFG S+
Sbjct: 184 PDLCIRTGGEHRISNFLLWQLAYAELYFSDLFWPDFKHDAMRAALADFASRQRRFGKTSE 243
Query: 242 K 242
+
Sbjct: 244 Q 244
>gi|304409566|ref|ZP_07391186.1| undecaprenyl diphosphate synthase [Shewanella baltica OS183]
gi|307303924|ref|ZP_07583677.1| undecaprenyl diphosphate synthase [Shewanella baltica BA175]
gi|304352084|gb|EFM16482.1| undecaprenyl diphosphate synthase [Shewanella baltica OS183]
gi|306912822|gb|EFN43245.1| undecaprenyl diphosphate synthase [Shewanella baltica BA175]
Length = 275
Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats.
Identities = 90/241 (37%), Positives = 145/241 (60%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ ++ S P H+ IIMDGNGRWA +G R GH+ G++ V+ A+++GI++LT+F
Sbjct: 28 LPELVKQSLPKHVAIIMDGNGRWAQTQGKLRVLGHKAGVKAVRRAVSTASQLGIESLTLF 87
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP E+S L++L + L++ L KN +K+++IG+ + + A+
Sbjct: 88 AFSSENWRRPDKEVSLLMELFFTVLQREIKLLHKNQVKLKIIGDISRFSARLQKQIAAAQ 147
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T NTGL L +A NY R +I +A + + + +E+G + S ++ +L + +
Sbjct: 148 EKTSGNTGLVLNVAANYGGRWDILQAAQKLAEKVETGEMTSSQFTEEALSAHLCMQNQSE 207
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRTGG+ R+S+F+LWQ AY+E VF WPDF + F A+ + R RRFG
Sbjct: 208 VDLMIRTGGDCRISNFVLWQAAYAELVFTDTLWPDFDEQAFHEAIAIFASRQRRFGLTGS 267
Query: 242 K 242
+
Sbjct: 268 Q 268
>gi|15644150|ref|NP_229199.1| undecaprenyl pyrophosphate synthase [Thermotoga maritima MSB8]
gi|42560019|sp|Q9X1B8|UPPS_THEMA RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|4981961|gb|AAD36469.1|AE001792_9 conserved hypothetical protein [Thermotoga maritima MSB8]
Length = 233
Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats.
Identities = 103/231 (44%), Positives = 143/231 (61%), Gaps = 2/231 (0%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ IIMDGNGRWA RGLPR GH++G EV + V + E+GIK LT F+FS NW
Sbjct: 2 RIPQHVAIIMDGNGRWAKKRGLPRIKGHQRGAEVLHNTVKWSLELGIKYLTAFSFSTENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP E+ L+ L + + L++ ++VR++G + L + +L +E E++T+
Sbjct: 62 KRPKEEVEFLMDLFVQMIDREMELLRRERVRVRILGRKEGLPEKVLKKWQEVEEKTKEFD 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+ L IAFNY R EI A++ I +D+ G ++ +YL DVPDPDLIIRT
Sbjct: 122 RMTLIIAFNYGGRREILDAVEFILKDVSHGKKI--ELTEETFRQYLYLPDVPDPDLIIRT 179
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE RLS+FLLWQ AYSE F + WPDF++ F A+ Y+ R+RRFGGL
Sbjct: 180 SGEMRLSNFLLWQSAYSELYFFKKLWPDFTKRDFLRAIESYSKRERRFGGL 230
>gi|319411328|emb|CBY91739.1| undecaprenyl pyrophosphate synthetase (UPP synthetase;
di-trans,poly-cis-decaprenylcistransferase; undecaprenyl
diphosphate synthase; UDS) [Neisseria meningitidis WUE
2594]
Length = 248
Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats.
Identities = 98/240 (40%), Positives = 145/240 (60%), Gaps = 6/240 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + ++ P HI +IMDGNGRWA R LPR GH++G++ +V A++G++ LT+FA
Sbjct: 7 AVLEHTAIPKHIAVIMDGNGRWAKKRFLPRIMGHKRGLDALENMVKHCAKLGVQYLTVFA 66
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP E+S L+ L L+K L +NN++++++G+R IL ++EAE
Sbjct: 67 FSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNMRLKILGSRERFSRQILKGIEEAEA 126
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTGL L IA +Y R +I +A + + ++ +AK+L D P+P
Sbjct: 127 LTANNTGLTLSIAADYGGRWDILQAANKLIAEGV------SEITEDTLAKHLMLGDAPEP 180
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL IRTGGE R+S+FLLWQ+AY+E F WPDF + A+ + R+RRFG S++
Sbjct: 181 DLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDGKALDDAVASFQKRERRFGRTSEQ 240
>gi|296313407|ref|ZP_06863348.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria polysaccharea
ATCC 43768]
gi|296840118|gb|EFH24056.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria polysaccharea
ATCC 43768]
Length = 248
Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats.
Identities = 99/240 (41%), Positives = 145/240 (60%), Gaps = 6/240 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + ++ P HI +IMDGNGRWA R LPR GH++G++ +V A++G++ LT+FA
Sbjct: 7 AVLEHTAIPKHIAVIMDGNGRWAKKRFLPRIMGHKRGLDALENMVKHCAKLGVQYLTVFA 66
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP E+S L+ L L+K L +NN++++++G+R IL ++EAE
Sbjct: 67 FSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNMRLKILGSRERFSRQILKGIEEAEA 126
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTGL L IA +Y R +I +A + + ++ +AKYL D P+P
Sbjct: 127 LTANNTGLTLSIAADYGGRWDILQAANKLIAEGV------SEITEDTLAKYLMLGDAPEP 180
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL IRTGGE R+S+FLLWQ+AY+E F WPDF + A+ + R+RRFG S++
Sbjct: 181 DLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDGKALDDAVASFQKRERRFGRTSEQ 240
>gi|296110432|ref|YP_003620813.1| di-trans-poly-cis-decaprenylcistransferase [Leuconostoc kimchii
IMSNU 11154]
gi|295831963|gb|ADG39844.1| di-trans-poly-cis-decaprenylcistransferase [Leuconostoc kimchii
IMSNU 11154]
Length = 258
Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats.
Identities = 98/236 (41%), Positives = 139/236 (58%), Gaps = 3/236 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
PDHI IIMDGNGRWA R +PR AGH+ G+ +I AA+ +G+K LT++AFS NW
Sbjct: 18 KIPDHIAIIMDGNGRWAKRRLMPRVAGHKTGMNTVKKIATAASNLGVKVLTLYAFSTENW 77
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E++ L++L F + L KNNI+V++IGN L ++ A QT +
Sbjct: 78 SRPNDEVNFLMQLPVDFFSEFVPDLIKNNIRVQIIGNIDELPKSTRHAVQNAIVQTSQGS 137
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD---VPDPDLI 185
G+ L A NY + EI A K + Q + G + +D++ L ++ L T+ + PDL+
Sbjct: 138 GMILNFALNYGGQIEIVEATKKLAQQVADGDISPNDINGDLFSEALQTASLGKLAAPDLM 197
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
IRT GE RLS+F+ +Q AY+E F WPDF+ + A+ + RDRRFGGL K
Sbjct: 198 IRTSGELRLSNFMPYQSAYAELYFTDVLWPDFTADDLLQAITAFTSRDRRFGGLDK 253
>gi|291614110|ref|YP_003524267.1| undecaprenyl diphosphate synthase [Sideroxydans lithotrophicus
ES-1]
gi|291584222|gb|ADE11880.1| undecaprenyl diphosphate synthase [Sideroxydans lithotrophicus
ES-1]
Length = 255
Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats.
Identities = 98/235 (41%), Positives = 143/235 (60%), Gaps = 3/235 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
++ P HI IIMDGNGRWA R +PR GH++G+E E+V A ++G++ LT+FAFS N
Sbjct: 16 TAVPRHIAIIMDGNGRWAKQRFMPRVMGHQRGVETVREMVKACRQLGVEYLTLFAFSSEN 75
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+S L++L L++ L +NNI+++VIG+R + ++ ++EAE T N
Sbjct: 76 WRRPADEVSFLMQLFMKMLEREVGKLHENNIRLKVIGDRSRFEAQLVRHIEEAELLTANN 135
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T L L IA NY R +I +A+ + ++ + + YL P+PDL IR
Sbjct: 136 TSLTLTIAANYGGRWDIMQAMHAL---SQAHPERATAFGEEELTPYLSMPYAPEPDLFIR 192
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE+R+S+FLLWQ+AY+E F WP F R A+ Y R+RRFG S++
Sbjct: 193 TGGEQRISNFLLWQLAYTELYFTDTLWPAFDRAALESAIQSYQKRERRFGRTSEQ 247
>gi|304388990|ref|ZP_07371037.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
ATCC 13091]
gi|254672754|emb|CBA06773.1| undecaprenyl pyrophosphate synthetase [Neisseria meningitidis
alpha275]
gi|304337124|gb|EFM03311.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
ATCC 13091]
gi|325135113|gb|EGC57740.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis M13399]
Length = 248
Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats.
Identities = 98/240 (40%), Positives = 144/240 (60%), Gaps = 6/240 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + ++ P HI +IMDGNGRWA R LPR GH++G++ +V A++G++ LT+FA
Sbjct: 7 AVLEHTAIPKHIAVIMDGNGRWAKKRFLPRIMGHKRGLDALENMVKHCAKLGVQYLTVFA 66
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP E+S L+ L L+K L +NN++++++G+R IL ++EAE
Sbjct: 67 FSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNMRLKILGSRERFSRQILKGIEEAEA 126
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTGL L IA +Y R +I +A + ++ +AK+L D P+P
Sbjct: 127 LTANNTGLTLSIAADYGGRWDILQAANKLIAKGV------SEITEDTLAKHLMLGDAPEP 180
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL IRTGGE R+S+FLLWQ+AY+E F WPDF + A+ + R+RRFG S++
Sbjct: 181 DLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDGKALDDAVASFQKRERRFGRTSEQ 240
>gi|269837766|ref|YP_003319994.1| undecaprenyl diphosphate synthase [Sphaerobacter thermophilus DSM
20745]
gi|269787029|gb|ACZ39172.1| undecaprenyl diphosphate synthase [Sphaerobacter thermophilus DSM
20745]
Length = 236
Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats.
Identities = 106/231 (45%), Positives = 146/231 (63%), Gaps = 4/231 (1%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IIMDGNGRWA RGLPR AGH G E I AAE+GIK LT++AFS NWR
Sbjct: 1 MPRHVAIIMDGNGRWATRRGLPRIAGHEAGTENIRRITTHAAELGIKYLTLWAFSTENWR 60
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ +++++ +++ L +N ++R IG+ LD D+ ++EA TR N
Sbjct: 61 RPKEEVEGILQILARSIERETAELHRNGAQLRHIGSLDGLDPDLQQAVREAIALTRNNDR 120
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ L +AFNY R EI +AI+ + D V +V L+ +YL T+D+P+PDLIIRT
Sbjct: 121 IVLTLAFNYGGRAEIIQAIRRMIAD----GVRPEEVTEELVDRYLYTADLPEPDLIIRTS 176
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
GE+R S+FLLWQ AY+E+ F P WPDF E A++ Y R+RRFGG++
Sbjct: 177 GEQRTSNFLLWQAAYAEYHFTPVLWPDFGPEDLERAVDDYCHRERRFGGIT 227
>gi|15825692|pdb|1JP3|A Chain A, Structure Of E.Coli Undecaprenyl Pyrophosphate Synthase
gi|15825693|pdb|1JP3|B Chain B, Structure Of E.Coli Undecaprenyl Pyrophosphate Synthase
Length = 253
Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats.
Identities = 90/239 (37%), Positives = 139/239 (58%), Gaps = 4/239 (1%)
Query: 6 MSSSPP----DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+S P H+ II DGNGRWA +G R GH+ G + V+ AA GI+ LT++
Sbjct: 9 LSEKLPAHGCRHVAIIXDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY 68
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+S L +L L SL ++N+++R+IG+ + + ++++E
Sbjct: 69 AFSSENWNRPAQEVSALXELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSE 128
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T NTGL L IA NY R +I + ++ + + ++ G++ +D + +++ ++
Sbjct: 129 ALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEXLNQHVCXHELAP 188
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRTGGE R+S+FLLWQ+AY+E F WPDF + F ALN + R+RRFGG
Sbjct: 189 VDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGGTE 247
>gi|328954576|ref|YP_004371910.1| Undecaprenyl pyrophosphate synthase [Desulfobacca acetoxidans DSM
11109]
gi|328454900|gb|AEB10729.1| Undecaprenyl pyrophosphate synthase [Desulfobacca acetoxidans DSM
11109]
Length = 256
Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats.
Identities = 94/242 (38%), Positives = 138/242 (57%), Gaps = 1/242 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + P H+ IIMDGNGRWA RG R GH++G E EIV + +G+ LT+
Sbjct: 5 LRQQLDKARLPRHVAIIMDGNGRWAQKRGFSRVRGHQEGAESVREIVRISRNLGLGYLTL 64
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E+ L+ L+ +L++ L+ NI R IG+ L + +L A
Sbjct: 65 YAFSEENWQRPPKEVQALMHLLTHYLQRELAELRAQNIAFRAIGDLSQLPSKVRSLLDTA 124
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
T + L +A +Y +R EI +A + + + + G + D++ + A+ L T D+P
Sbjct: 125 AKSTIH-PAMTLTLALSYGARSEIVQAARRLSEQVRRGEMQPADINGEVFARSLYTGDMP 183
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GE R+S+FLLWQ+AY+E F WPDF E F AL Y R RRFG
Sbjct: 184 DPDLLIRTSGEYRISNFLLWQLAYTELYFTETLWPDFREEEFLQALLDYQQRLRRFGLTQ 243
Query: 241 KK 242
++
Sbjct: 244 EQ 245
>gi|152981211|ref|YP_001353744.1| undecaprenyl pyrophosphate synthetase [Janthinobacterium sp.
Marseille]
gi|151281288|gb|ABR89698.1| undecaprenyl pyrophosphate synthetase [Janthinobacterium sp.
Marseille]
Length = 254
Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats.
Identities = 97/233 (41%), Positives = 138/233 (59%), Gaps = 4/233 (1%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI IIMDGNGRWA R +PR AGH KG+E IV A A G++ +T FAFS NWR
Sbjct: 16 VPRHIAIIMDGNGRWATKRFMPRVAGHVKGVEAVRGIVEACARQGVEYVTFFAFSSENWR 75
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+S L++L + L++ + N I+++++G+ DD + ++ AE +T NT
Sbjct: 76 RPEDEVSLLMRLFVTALEREVSKMHANGIRLKIVGDLSRFDDKLQKMISAAERKTAGNTR 135
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L + I NY R +I +A+ + + + S + +A YL + P+PDL IRTG
Sbjct: 136 LTVTICANYGGRWDIMQAVNQML----AANPGSSNFSEEQLAPYLSLAYAPEPDLFIRTG 191
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+R+S+FLLWQ+AY+E F YWPDF A+ Y R+RRFG S +
Sbjct: 192 GEERISNFLLWQLAYTELYFTDTYWPDFDAAALELAIASYQQRERRFGRTSAQ 244
>gi|121634061|ref|YP_974306.1| putative undecaprenyl diphosphate synthase [Neisseria meningitidis
FAM18]
gi|120865767|emb|CAM09496.1| putative undecaprenyl diphosphate synthase [Neisseria meningitidis
FAM18]
Length = 257
Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats.
Identities = 98/240 (40%), Positives = 145/240 (60%), Gaps = 6/240 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + ++ P HI +IMDGNGRWA R LPR GH++G++ +V A++G++ LT+FA
Sbjct: 16 AVLEHTAIPKHIAVIMDGNGRWAKKRFLPRIMGHKRGLDALENMVKHCAKLGVQYLTVFA 75
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP E+S L+ L L+K L +NN++++++G+R + IL ++EAE
Sbjct: 76 FSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNMRLKILGSRERFNRQILQGIEEAEA 135
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTGL L IA +Y R +I +A + + ++ +AK+L D P+P
Sbjct: 136 LTANNTGLTLSIAADYGGRWDILQAANKLIAEGV------SEITEDTLAKHLMLGDAPEP 189
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL IRTGGE R+S+FLLWQ+AY+E F WPDF A+ + R+RRFG S++
Sbjct: 190 DLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDETALDAAVASFQKRERRFGRTSEQ 249
>gi|59802115|ref|YP_208827.1| putative undecaprenyl diphosphate synthase [Neisseria gonorrhoeae
FA 1090]
gi|194099963|ref|YP_002003102.1| putative undecaprenyl diphosphate synthase [Neisseria gonorrhoeae
NCCP11945]
gi|239997971|ref|ZP_04717895.1| putative undecaprenyl diphosphate synthase [Neisseria gonorrhoeae
35/02]
gi|240015051|ref|ZP_04721964.1| putative undecaprenyl diphosphate synthase [Neisseria gonorrhoeae
DGI18]
gi|240017500|ref|ZP_04724040.1| putative undecaprenyl diphosphate synthase [Neisseria gonorrhoeae
FA6140]
gi|240081640|ref|ZP_04726183.1| putative undecaprenyl diphosphate synthase [Neisseria gonorrhoeae
FA19]
gi|240113921|ref|ZP_04728411.1| putative undecaprenyl diphosphate synthase [Neisseria gonorrhoeae
MS11]
gi|240116654|ref|ZP_04730716.1| putative undecaprenyl diphosphate synthase [Neisseria gonorrhoeae
PID18]
gi|240118876|ref|ZP_04732938.1| putative undecaprenyl diphosphate synthase [Neisseria gonorrhoeae
PID1]
gi|240122120|ref|ZP_04735082.1| putative undecaprenyl diphosphate synthase [Neisseria gonorrhoeae
PID24-1]
gi|240124413|ref|ZP_04737369.1| putative undecaprenyl diphosphate synthase [Neisseria gonorrhoeae
PID332]
gi|240124715|ref|ZP_04737601.1| putative undecaprenyl diphosphate synthase [Neisseria gonorrhoeae
SK-92-679]
gi|240129090|ref|ZP_04741751.1| putative undecaprenyl diphosphate synthase [Neisseria gonorrhoeae
SK-93-1035]
gi|254494675|ref|ZP_05107846.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae 1291]
gi|260439587|ref|ZP_05793403.1| putative undecaprenyl diphosphate synthase [Neisseria gonorrhoeae
DGI2]
gi|268599985|ref|ZP_06134152.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae MS11]
gi|268602322|ref|ZP_06136489.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae PID18]
gi|268604585|ref|ZP_06138752.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae PID1]
gi|268683042|ref|ZP_06149904.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae
PID332]
gi|268683290|ref|ZP_06150152.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae
SK-92-679]
gi|268687471|ref|ZP_06154333.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae
SK-93-1035]
gi|291042823|ref|ZP_06568564.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae DGI2]
gi|293398156|ref|ZP_06642361.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria gonorrhoeae
F62]
gi|73920269|sp|Q5F5X2|UPPS_NEIG1 RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|59719010|gb|AAW90415.1| putative undecaprenyl diphosphate synthase [Neisseria gonorrhoeae
FA 1090]
gi|193935253|gb|ACF31077.1| putative undecaprenyl diphosphate synthase [Neisseria gonorrhoeae
NCCP11945]
gi|226513715|gb|EEH63060.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae 1291]
gi|268584116|gb|EEZ48792.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae MS11]
gi|268586453|gb|EEZ51129.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae PID18]
gi|268588716|gb|EEZ53392.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae PID1]
gi|268623326|gb|EEZ55726.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae
PID332]
gi|268623574|gb|EEZ55974.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae
SK-92-679]
gi|268627755|gb|EEZ60155.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae
SK-93-1035]
gi|291013257|gb|EFE05223.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae DGI2]
gi|291611419|gb|EFF40489.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria gonorrhoeae
F62]
gi|317165415|gb|ADV08956.1| putative undecaprenyl diphosphate synthase [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 248
Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats.
Identities = 97/238 (40%), Positives = 144/238 (60%), Gaps = 6/238 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ ++ P HI +IMDGNGRWA R LPR GH++G++ +V A++G++ LT+FAFS
Sbjct: 9 LEHTAIPRHIAVIMDGNGRWAKKRFLPRIMGHKRGLDALENMVKHCAKLGVQYLTVFAFS 68
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRRP E+S L+ L L+K L +NN++++++G+R + IL ++EAE T
Sbjct: 69 TENWRRPEDEVSFLMGLFLQALQKQVRRLHENNMRLKILGSRERFNRQILQGIEEAEALT 128
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NTGL L IA +Y R +I +A + + ++ +AK+L D P+PDL
Sbjct: 129 ANNTGLTLSIAADYGGRWDILQAANKLIAEGV------SEITEDTLAKHLMLGDAPEPDL 182
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTGGE R+S+FLLWQ+AY+E F WPDF A+ + R+RRFG S++
Sbjct: 183 FIRTGGETRISNFLLWQMAYAELYFTDILWPDFDETALDAAVASFQKRERRFGRTSEQ 240
>gi|237756527|ref|ZP_04585055.1| undecaprenyl pyrophosphate synthetase 1 [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237691313|gb|EEP60393.1| undecaprenyl pyrophosphate synthetase 1 [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 231
Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats.
Identities = 99/239 (41%), Positives = 146/239 (61%), Gaps = 8/239 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M+ ++ P+H+ IIMDGNGRWA RGL R GHR+G++ + A +VGIK +T+
Sbjct: 1 MIENLFK--IPEHVAIIMDGNGRWAKMRGLDRVYGHREGVKTVERTIKFAKKVGIKYITL 58
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW+RP+ E++ +++L+ ++ + LK+N+IK+ +G + L D +L +K+A
Sbjct: 59 FAFSTENWQRPIEEVNAIMQLLVEYIHEKLPFLKENDIKLLFMGRKEGLWDSVLEAMKKA 118
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
ED+T+ + L + I NYS + EI A+ I +D YL ++P
Sbjct: 119 EDETKNCSSLIVIIGLNYSGKAEIVDAVNKIL------KSNVEKIDEESFRNYLYLPEIP 172
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRT GEKR+S+F+LWQ+AY+E F WPDF E F AL Y RDRRFG +
Sbjct: 173 DPDLLIRTSGEKRISNFILWQLAYTELYFTDVLWPDFDEEEFLKALYDYQSRDRRFGRV 231
>gi|239941030|ref|ZP_04692967.1| putative undecaprenyl phosphate synthetase [Streptomyces
roseosporus NRRL 15998]
gi|239987509|ref|ZP_04708173.1| putative undecaprenyl phosphate synthetase [Streptomyces
roseosporus NRRL 11379]
gi|291444470|ref|ZP_06583860.1| undecaprenyl pyrophosphate synthetase 2 [Streptomyces roseosporus
NRRL 15998]
gi|291347417|gb|EFE74321.1| undecaprenyl pyrophosphate synthetase 2 [Streptomyces roseosporus
NRRL 15998]
Length = 271
Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats.
Identities = 87/238 (36%), Positives = 137/238 (57%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P H+ ++MDGNGRWA RGLPR GH+ G V +++ E+G+KNL+++AF
Sbjct: 29 KIPGELVPQHVAVVMDGNGRWAKERGLPRTEGHKVGEGVVLDVLKGCIEMGVKNLSLYAF 88
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + +++ + + I++R +G L ++ L+ A++Q
Sbjct: 89 STENWKRSPDEVKFLMNFNRDVIRRRRDEMDELGIRIRWVGRMPKLWKSVVQELQVAQEQ 148
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N + L+ NY R EI+ A + I QD+ +G + V+ KY+ D+PD D
Sbjct: 149 TKNNDAMTLYFCVNYGGRAEIADAAQRIAQDVAAGKLDPSKVNEKTFQKYIYYPDMPDVD 208
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
L +R GE+R S++L+WQ AY+E VF WPDF R + A +Y RDRRFGG +
Sbjct: 209 LFVRPSGEQRTSNYLIWQSAYAEMVFQDVLWPDFDRRDLWRACLEYAQRDRRFGGAQE 266
>gi|330830751|ref|YP_004393703.1| Undecaprenyl diphosphate synthase [Aeromonas veronii B565]
gi|328805887|gb|AEB51086.1| Undecaprenyl diphosphate synthase [Aeromonas veronii B565]
Length = 258
Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats.
Identities = 96/245 (39%), Positives = 151/245 (61%), Gaps = 3/245 (1%)
Query: 1 MVASM---MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKN 57
++A++ +SS P H+ IIMDGNGRWA RG R GH+ G++ E V AA I+
Sbjct: 3 LLAALGDCANSSLPRHVAIIMDGNGRWAQNRGKMRVYGHKAGVKSVREAVTFAARAKIEA 62
Query: 58 LTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
LT+FAFS NWRRP E+S L++L + L + L N I+++VIG+ + + +
Sbjct: 63 LTLFAFSSENWRRPEGEVSALMELFITVLGREVQKLHNNGIRLKVIGDTARFSERLQAKI 122
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+AE T N GL L IA NY + +I++A + + + + +G + + D+D S++ + + +
Sbjct: 123 AKAEALTANNKGLTLNIAANYGGQWDIAQAARKLAKAVAAGELAADDIDESMLTREVCMA 182
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
D+P DL+IRTGG+ R+S+F+LWQ+AY+E F P WPDF+ F A+ + R+RRFG
Sbjct: 183 DLPPVDLLIRTGGDHRISNFVLWQLAYAELYFTPVLWPDFNEAEFSEAVASFVARERRFG 242
Query: 238 GLSKK 242
++
Sbjct: 243 CTGEQ 247
>gi|325137019|gb|EGC59615.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis M0579]
Length = 248
Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats.
Identities = 97/240 (40%), Positives = 143/240 (59%), Gaps = 6/240 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + ++ P HI +IMDGNGRWA R LPR GH++G++ +V A++G++ LT+FA
Sbjct: 7 AVLEHTAIPKHIAVIMDGNGRWAKKRFLPRIMGHKRGLDALENMVKHCAKLGVQYLTVFA 66
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP E+S L+ L L+K L +NN++++++G+R IL ++EAE
Sbjct: 67 FSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNMRLKILGSRERFSRQILKGIEEAEA 126
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTGL L IA +Y R +I +A + + + +AK+L + P+P
Sbjct: 127 LTANNTGLTLSIAADYGGRWDILQAANKLIAEGV------SKITEDTLAKHLMLGNAPEP 180
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL IRTGGE R+S+FLLWQ+AY+E F WPDF A+ + R+RRFG S++
Sbjct: 181 DLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDETALDAAVASFQKRERRFGRTSEQ 240
>gi|253687342|ref|YP_003016532.1| undecaprenyl diphosphate synthase [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251753920|gb|ACT11996.1| undecaprenyl diphosphate synthase [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 253
Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats.
Identities = 91/230 (39%), Positives = 139/230 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +RG R GH+ G++ V+ A G+ LT++AFS NW R
Sbjct: 17 PRHVAIIMDGNGRWAKSRGKMRIFGHQAGVKAVRRSVSFAVSQGLDALTLYAFSSENWNR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L L SL K+N+++RVIG+ + ++ +E T N GL
Sbjct: 77 PAQEVSALMELFVRALDSEVKSLHKHNVRLRVIGDIGRFSPRLQERIRRSEALTEKNQGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I + ++ + + ++ G + ++ + + +Y+ +D+ DL+IRTGG
Sbjct: 137 TLNIAANYGGRWDIIQGVRQLAEQVQEGILRPDSINEASLCQYICLNDLAPVDLVIRTGG 196
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E R+S+FLLWQ+AY+E F WPDF ++F ALN + R+RRFGG +
Sbjct: 197 EHRISNFLLWQIAYAELYFTDVLWPDFDEQVFEGALNAFAQRERRFGGTT 246
>gi|229829208|ref|ZP_04455277.1| hypothetical protein GCWU000342_01295 [Shuttleworthia satelles DSM
14600]
gi|229792371|gb|EEP28485.1| hypothetical protein GCWU000342_01295 [Shuttleworthia satelles DSM
14600]
Length = 232
Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats.
Identities = 101/231 (43%), Positives = 154/231 (66%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P+H+ II+DGNGRWA ++G+PR GH G + I A E G++ LT++AFS NW
Sbjct: 2 AVPEHVAIILDGNGRWAKSKGMPRTYGHTVGAKNVERISRIAYETGVRYLTLYAFSTENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+S L+KL+ ++L + +++N+++RVIG+ L+ + ++ E +T + T
Sbjct: 62 SRPDDEVSALMKLLTTYLNTCLKTARRDNMRLRVIGDISRLEPSLQELISRVERETSVYT 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GLNL IA NY RDEI RA++ ++ D+ + ++ ++ YLDT+D+PDPDL+IRT
Sbjct: 122 GLNLTIAVNYGGRDEIVRAMREMYIDLTEKGADASEITEGRLSSYLDTADLPDPDLLIRT 181
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE+RLS++LLWQ+AY+EF F P WPDF RE F A+ Y R+RR+G +
Sbjct: 182 SGEQRLSNYLLWQLAYAEFYFTPVPWPDFRREEFLEAIAAYEHRERRYGKI 232
>gi|92117245|ref|YP_576974.1| undecaprenyl diphosphate synthase [Nitrobacter hamburgensis X14]
gi|91800139|gb|ABE62514.1| Undecaprenyl pyrophosphate synthetase [Nitrobacter hamburgensis
X14]
Length = 252
Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats.
Identities = 119/232 (51%), Positives = 163/232 (70%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWAA+RGLPR GHR+G+E +V AA E+GI+ LTIF+FS NW R
Sbjct: 18 PPHVAIIMDGNGRWAASRGLPRAEGHRRGVEALRRVVRAAHELGIQYLTIFSFSSENWSR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +EI +L L++ F++ SL ++ ++VRVIG R L+ DI +L EAE+ TR NT L
Sbjct: 78 PATEIGDLFGLLRRFIRNDLASLHRDGVRVRVIGERAGLEPDICALLGEAEELTRDNTSL 137
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +AFNY SR EI+ A + + +++ G +++ + +YLD D+PDPDLIIRT G
Sbjct: 138 TLVVAFNYGSRQEIANAAQQLAREVADGKRDPATINADALGQYLDAPDIPDPDLIIRTSG 197
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+RLS+FL+WQ AYSEFVF+P +WPDF + A+ +Y R+RRFGGL+ K
Sbjct: 198 EQRLSNFLMWQAAYSEFVFVPMHWPDFDKSALEGAIAEYARRERRFGGLAAK 249
>gi|83311593|ref|YP_421857.1| undecaprenyl pyrophosphate synthase [Magnetospirillum magneticum
AMB-1]
gi|82946434|dbj|BAE51298.1| Undecaprenyl pyrophosphate synthase [Magnetospirillum magneticum
AMB-1]
Length = 243
Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats.
Identities = 108/237 (45%), Positives = 155/237 (65%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M++ PP H+ IIMDGNGRWA ARGLPR AGH++G E V AA E+G+ LT+
Sbjct: 4 MLSPADQPPPPVHVAIIMDGNGRWAKARGLPRTAGHKRGAEAVRRTVEAAREMGVSYLTL 63
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E+++L+ L++ +L+ +L KN I+++VIG+R L DI+ +++E+
Sbjct: 64 YAFSSENWKRPAGEVTDLMGLLRLYLRNEVNNLHKNGIRLKVIGDRSRLGADIVRLIEES 123
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E +T NT L L +A +Y R EI A + + +D+ +G + VD I L T+ +P
Sbjct: 124 EAKTAGNTALTLLLALSYGGRQEIVEAARALARDVAAGRLSPDAVDEDAIDARLSTAGIP 183
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DPD+IIRT GE+R+S+FLLWQ AY+E VF+ WPDF R A+ + RDRRFG
Sbjct: 184 DPDMIIRTSGEQRISNFLLWQGAYAELVFMDTLWPDFGRPELEAAIRDFQGRDRRFG 240
>gi|160934098|ref|ZP_02081485.1| hypothetical protein CLOLEP_02961 [Clostridium leptum DSM 753]
gi|156866771|gb|EDO60143.1| hypothetical protein CLOLEP_02961 [Clostridium leptum DSM 753]
Length = 249
Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats.
Identities = 102/230 (44%), Positives = 149/230 (64%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+GIIMDGNGRWA RG+PR AGH G F I A++GI+ LT++AFS NW+
Sbjct: 20 LPRHLGIIMDGNGRWAKKRGMPRSAGHTVGAANFKTITRYCAKIGIEYLTVYAFSTENWK 79
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP +EI+ L+KL K +L++ + ++IKVR IG+ + D+ +++E + + TG
Sbjct: 80 RPSAEINGLMKLFKQYLEESLRDFRDDDIKVRFIGDTEAFSSDLRQLIEETREVCKDRTG 139
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ L IA NY RDEI RA+K I Q + G + ++ + +++L T+ PDPDLIIR
Sbjct: 140 MVLNIAMNYGGRDEILRAVKQISQKVSQGELTQEEITEEVFSRHLYTAGQPDPDLIIRPS 199
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE+R+S+FLLWQ AY+E++ + WPDF+ AL +Y R+RRFGG+
Sbjct: 200 GEQRISNFLLWQSAYTEYIIMDILWPDFTTADLDAALAEYARRNRRFGGV 249
>gi|293394708|ref|ZP_06639000.1| undecaprenyl diphosphate synthase [Serratia odorifera DSM 4582]
gi|291422834|gb|EFE96071.1| undecaprenyl diphosphate synthase [Serratia odorifera DSM 4582]
Length = 252
Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats.
Identities = 92/233 (39%), Positives = 138/233 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R GH+ G++ V+ AA + LT++AFS NW R
Sbjct: 16 PRHVAIIMDGNGRWAKRQGKLRVFGHKAGVKSVRRAVSFAASHHLDALTLYAFSSENWNR 75
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L L SL K+N+++RVIG+ + ++ +E T N GL
Sbjct: 76 PAQEVSALMELFVRALDSEVKSLHKHNVRLRVIGDVSRFSARLQERIRRSEQLTENNDGL 135
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I + +K + + ++ G + ++ L+++ + S++ DL+IRTGG
Sbjct: 136 TLNIAANYGGRWDIIQGVKRLAERVQEGLLRPDQINEELLSEQVCMSELTPVDLVIRTGG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
E R+S+FLLWQ+AY+E F WPDF +F ALN + R+RRFGG + G
Sbjct: 196 EHRISNFLLWQIAYAELYFTDVLWPDFDELVFEGALNAFAQRERRFGGTTPIG 248
>gi|229496176|ref|ZP_04389896.1| di-trans,poly-cis-decaprenylcistransferase [Porphyromonas
endodontalis ATCC 35406]
gi|229316754|gb|EEN82667.1| di-trans,poly-cis-decaprenylcistransferase [Porphyromonas
endodontalis ATCC 35406]
Length = 261
Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats.
Identities = 96/240 (40%), Positives = 142/240 (59%), Gaps = 1/240 (0%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M + P H+ IIMDGNGRWA A+G R GH +G+ VAAAA+VGI LT++AFS
Sbjct: 1 MPCEAVPKHVAIIMDGNGRWATAQGKDRSYGHVEGVAALRRTVAAAAKVGINTLTVYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP +E+ L+ L+ ++ +++ IG+ L + ++ +QT
Sbjct: 61 SENWARPTAEVDALMALMAQSMEHYAPEFASEGVRILAIGDLHRLPESTRQAVERTMEQT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVD-SSLIAKYLDTSDVPDPD 183
N+ + L + +YSSR E++ A++ + QD+ SG + D+ +A YL T +PDPD
Sbjct: 121 AHNSTITLVVCLSYSSRWELNHAVRTLAQDVASGKISPEDLSGDEPLAPYLSTYGIPDPD 180
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
L+IRTGGE R+S+FLL+Q+AYSE F P WPDF E AL +++ R RRFG + +
Sbjct: 181 LLIRTGGEFRISNFLLYQIAYSELYFCPTLWPDFGEEDLQKALYEFSQRHRRFGLVEGQS 240
>gi|322831593|ref|YP_004211620.1| undecaprenyl diphosphate synthase [Rahnella sp. Y9602]
gi|321166794|gb|ADW72493.1| undecaprenyl diphosphate synthase [Rahnella sp. Y9602]
Length = 252
Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats.
Identities = 92/233 (39%), Positives = 137/233 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R GH+ G++ + V+ AA + LT++AFS NW R
Sbjct: 16 PRHVAIIMDGNGRWAKRQGKMRVFGHKAGVKSVRKAVSFAASHHLDALTLYAFSSENWNR 75
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L L SL K+N+++RVIG+ + ++ +E T+ N GL
Sbjct: 76 PAQEVSALMELFVRALDSEVKSLHKHNVRLRVIGDVSRFSARLQERIRRSETMTQNNDGL 135
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I + +K + +E+G++ + + L+ + S++ DL+IRTGG
Sbjct: 136 TLNIAANYGGRWDIIQGVKTLAGQVEAGTLRAEQITEELLNSAVCMSELAPVDLVIRTGG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
E R+S+FLLWQ+AY+E F WPDF F AL + R+RRFGG + G
Sbjct: 196 EHRISNFLLWQIAYAELYFTDVLWPDFDENTFEGALTAFAQRERRFGGTTPIG 248
>gi|116073041|ref|ZP_01470303.1| undecaprenyl diphosphate synthase [Synechococcus sp. RS9916]
gi|116068346|gb|EAU74098.1| undecaprenyl diphosphate synthase [Synechococcus sp. RS9916]
Length = 265
Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats.
Identities = 92/237 (38%), Positives = 140/237 (59%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + P H+ +IMDGNGRWA ARGLPR GHR G+E + ++ G+K LT +A
Sbjct: 19 AELDPVRVPAHVAVIMDGNGRWAQARGLPRVMGHRAGVEALKATLRLCSDWGVKALTAYA 78
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RP E++ L+ L + L++ +L+ +++R +G+ +L + + ++ +A
Sbjct: 79 FSTENWSRPGDEVNFLMTLFERVLQRELQALEAEQVRIRFLGDLDALPEKLQALIADATA 138
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
+T NTG++ + NY R E+ A + + G + +D + +A L T+ DP
Sbjct: 139 RTANNTGIHFNVCTNYGGRRELVLAAQALATRAARGELEPSSIDENTLAAELFTAGEQDP 198
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DL+IRT GE+R+S+FLLWQ+AY+E +WPDF+RE AL Y R RRFGGL
Sbjct: 199 DLLIRTSGERRISNFLLWQLAYAEIHVTDVFWPDFNREALLEALLDYQGRRRRFGGL 255
>gi|184155194|ref|YP_001843534.1| undecaprenyl diphosphate synthase [Lactobacillus fermentum IFO
3956]
gi|183226538|dbj|BAG27054.1| undecaprenyl diphosphate synthase [Lactobacillus fermentum IFO
3956]
Length = 257
Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats.
Identities = 100/241 (41%), Positives = 150/241 (62%), Gaps = 3/241 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ S P H+ IIMDGNGRWA +R LPR AGH++G++ ++ AA+++GIK LT++AFS
Sbjct: 17 LDRSRVPHHVAIIMDGNGRWAQSRHLPRVAGHQQGMQTVKKVTMAASDLGIKALTLYAFS 76
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP +E+ L++L F L +N++V V+G+ L ++ A D T
Sbjct: 77 TENWKRPSTEVKFLMQLPIRFFNTFVPDLVAHNVRVMVMGDTTKLPAGTQKAVQGALDAT 136
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV---PD 181
+ TG+ L A NY RDEI RA + + + + +G + + LI++ + T+ + D
Sbjct: 137 KDCTGMVLNFALNYGGRDEIVRATQAVAKRVAAGELTPDAISEELISREMMTAPLGQFAD 196
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
P++IIRT GE+RLS+F+LWQ AYSE VF+ E+WPDF + AL + R RRFGGL+
Sbjct: 197 PEVIIRTSGEERLSNFMLWQAAYSELVFVDEHWPDFDGDSLKRALATFQSRHRRFGGLNN 256
Query: 242 K 242
K
Sbjct: 257 K 257
>gi|161870877|ref|YP_001600051.1| undecaprenyl diphosphate synthase [Neisseria meningitidis 053442]
gi|161596430|gb|ABX74090.1| undecaprenyl diphosphate synthase [Neisseria meningitidis 053442]
Length = 257
Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats.
Identities = 98/240 (40%), Positives = 144/240 (60%), Gaps = 6/240 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + ++ P HI +IMDGNGRWA R LPR GH++G++ +V A++G++ LT+FA
Sbjct: 16 AVLEHTAIPKHIAVIMDGNGRWAKKRFLPRIMGHKRGLDALENMVKHCAKLGVQYLTVFA 75
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP E+S L+ L L+K L +NN++++++G+R IL ++EAE
Sbjct: 76 FSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNMRLKILGSRERFSRQILKGIEEAEA 135
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTGL L IA +Y R +I +A + ++ +AK+L D P+P
Sbjct: 136 LTANNTGLTLSIAADYGGRWDILQAANKLIAKGV------SEITEDTLAKHLMLGDAPEP 189
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL IRTGGE R+S+FLLWQ+AY+E F WPDF + A+ + R+RRFG S++
Sbjct: 190 DLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDGKALDDAVASFQKRERRFGRTSEQ 249
>gi|186476092|ref|YP_001857562.1| undecaprenyl diphosphate synthase [Burkholderia phymatum STM815]
gi|184192551|gb|ACC70516.1| undecaprenyl diphosphate synthase [Burkholderia phymatum STM815]
Length = 260
Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats.
Identities = 101/235 (42%), Positives = 140/235 (59%), Gaps = 1/235 (0%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S+ P HI IIMDGNGRWA R LPR AGH +G++ V A A G++ LT+FAFS N
Sbjct: 14 SAVPRHIAIIMDGNGRWATQRRLPRVAGHTRGVDAVRAAVEACARQGVEYLTLFAFSSEN 73
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+S L++L + L++ L N I++RV+G+ D I ++ AE +T N
Sbjct: 74 WRRPTDEVSFLMRLFVTALEREIGKLHANGIRLRVVGDLSMFDKKIQDLITRAETKTAKN 133
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T L L IA NY R +I +A + + ++ A++L + P+PDL IR
Sbjct: 134 TRLTLTIAANYGGRWDIMQAT-RKLVEQSVQAGRPVEISEEAFAEHLAMAYAPEPDLFIR 192
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE+R+S+FLLWQ+AY+EF F YWPDF + A+ Y R+RRFG S +
Sbjct: 193 TGGEQRISNFLLWQLAYTEFYFTDTYWPDFDADALGRAMASYTGRERRFGRTSAQ 247
>gi|227499274|ref|ZP_03929386.1| Di-trans,poly-cis-decaprenylcistransferase [Anaerococcus tetradius
ATCC 35098]
gi|227218625|gb|EEI83859.1| Di-trans,poly-cis-decaprenylcistransferase [Anaerococcus tetradius
ATCC 35098]
Length = 232
Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats.
Identities = 95/236 (40%), Positives = 138/236 (58%), Gaps = 4/236 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M + P H+ I++DGNGRWA R +PR GH+ G + +I A E G+K L+++AFS
Sbjct: 1 MDKINIPTHVAIVLDGNGRWAKKRFMPRTYGHKNGADRVVDICLYAKECGVKYLSLYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E++ L+KL+ F+ L + N K+ IG+ L + + +A + T
Sbjct: 61 TENWKRPDDEVNYLMKLVIKFINSKLDILMRENCKLNFIGDLDKLPPETKAICLKAMEDT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
R N + L IA NY RDE+ A + + + V S D+ +I+ +L T D PDPDL
Sbjct: 121 RDNDAITLNIALNYGGRDELVHAFRQMLDE----GVASKDLTEEMISSHLYTKDQPDPDL 176
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
+IR GGE RLS+FL++Q+AY+E F WPDF R F AL + R+RR+G LS
Sbjct: 177 LIRPGGELRLSNFLIYQLAYAELYFTDTLWPDFDRACFDEALADFAKRNRRYGALS 232
>gi|296446142|ref|ZP_06888090.1| undecaprenyl diphosphate synthase [Methylosinus trichosporium OB3b]
gi|296256336|gb|EFH03415.1| undecaprenyl diphosphate synthase [Methylosinus trichosporium OB3b]
Length = 259
Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats.
Identities = 120/242 (49%), Positives = 171/242 (70%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
A++ S P H+ +IMDGNGRWAAARGLPR GHR+G+E + V AA E+G+ LT++
Sbjct: 11 AAALAPRSAPRHVALIMDGNGRWAAARGLPRFEGHRRGVEALRKTVRAAIELGVDYLTVY 70
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
+FS+ NW RP E+ L+ L+ F++ L+ NN++VRVIG+R+ L DDI +L+EAE
Sbjct: 71 SFSVENWSRPPEEVQSLLALLHRFIRNDIGELRSNNVRVRVIGDRIDLSDDIAALLREAE 130
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ T NTGL L +AFNY +R EI+ A + + +++ +G + D+D+ I+ LDT+ +PD
Sbjct: 131 ETTAANTGLTLIVAFNYGARQEIAAAARALAEEVAAGRLRPGDIDADAISARLDTAGIPD 190
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDLIIRT GE+RLS+F+LWQ AY+E +F+P +WPDF R F A++ Y RDRRFGGL+
Sbjct: 191 PDLIIRTSGEQRLSNFMLWQAAYAELLFVPVHWPDFDRADFEAAIDDYAHRDRRFGGLAP 250
Query: 242 KG 243
G
Sbjct: 251 VG 252
>gi|218767121|ref|YP_002341633.1| putative undecaprenyl diphosphate synthase [Neisseria meningitidis
Z2491]
gi|42559883|sp|Q9JX35|UPPS_NEIMA RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|121051129|emb|CAM07400.1| putative undecaprenyl diphosphate synthase [Neisseria meningitidis
Z2491]
Length = 248
Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats.
Identities = 99/240 (41%), Positives = 146/240 (60%), Gaps = 6/240 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + ++ P HI +IMDGNGRWA R LPR GH++G++ +V A++G++ LT+FA
Sbjct: 7 AVLEHTAIPKHIAVIMDGNGRWAKKRFLPRIMGHKRGLDALENMVKHCAKLGVQYLTVFA 66
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP E+S L+ L L+K L +NN++++++G+R + IL ++EAE
Sbjct: 67 FSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNMRLKILGSRERFNRQILKGIEEAEA 126
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTGL L IA +Y R +I +A + + ++ +AKYL D P+P
Sbjct: 127 LTANNTGLTLSIAADYGGRWDILQAANKLIAEGV------SEITEDTLAKYLMLGDAPEP 180
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL IRTGGE R+S+FLLWQ+AY+E F WPDF + A+ + R+RRFG S++
Sbjct: 181 DLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDGKALDDAVASFQKRERRFGRTSEQ 240
>gi|26988327|ref|NP_743752.1| undecaprenyl diphosphate synthase [Pseudomonas putida KT2440]
gi|148549388|ref|YP_001269490.1| undecaprenyl diphosphate synthase [Pseudomonas putida F1]
gi|42559803|sp|Q88MH6|UPPS_PSEPK RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|24983075|gb|AAN67216.1|AE016348_8 undecaprenyl diphosphate synthase [Pseudomonas putida KT2440]
gi|148513446|gb|ABQ80306.1| Undecaprenyl pyrophosphate synthetase [Pseudomonas putida F1]
gi|313500237|gb|ADR61603.1| UppS [Pseudomonas putida BIRD-1]
Length = 251
Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats.
Identities = 98/236 (41%), Positives = 145/236 (61%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
SS P H+ IIMDGN RWA R LP AGH+ G++ ++ A+ G++ LT+FAFS
Sbjct: 9 PSSVPRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAKSGVEVLTLFAFSSE 68
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW+RP E+ L++L S L++ L +NNI +R+IG+R ++ ++EAE T
Sbjct: 69 NWQRPAEEVGALMELFFSALRREAKRLDENNISLRIIGDRSRFHPELQAAMREAEAVTAG 128
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N L IA NY + +I++A + + +++++G + D+ L+ L T D+P PDL I
Sbjct: 129 NNRFILQIAANYGGQWDIAQAAQRLAREVQAGHLRPEDITPGLLQTCLATGDLPLPDLCI 188
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE R+S+FLLWQ+AY+E F YWPDF E +AL + R RRFG S++
Sbjct: 189 RTGGEHRISNFLLWQLAYAELYFSDLYWPDFKHEAMRNALADFASRQRRFGKTSEQ 244
>gi|238926720|ref|ZP_04658480.1| di-trans,poly-cis-decaprenylcistransferase [Selenomonas flueggei
ATCC 43531]
gi|238885252|gb|EEQ48890.1| di-trans,poly-cis-decaprenylcistransferase [Selenomonas flueggei
ATCC 43531]
Length = 269
Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats.
Identities = 102/233 (43%), Positives = 145/233 (62%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ I+MDGNGRWA A+G R GH G IV AA+E+GI+ LT++AFS NW+
Sbjct: 36 LPRHVAIVMDGNGRWAKAKGKSRSTGHEAGARTLKRIVRAASEMGIEVLTVYAFSTENWK 95
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP EI L++L +FL + + +++R IG R D +L ++EAE +T NTG
Sbjct: 96 RPHREIDFLLRLFDTFLAREIDEMNAEQVRIRFIGRRDRFSDHLLARMEEAEHRTAQNTG 155
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
++ +A NY S+DEI RA++ + +E G + + ++D L + LDT+ P DL IRT
Sbjct: 156 VHFNLAANYGSQDEILRAVRTLAARVEKGELRAEEIDEILFSHTLDTAGDPPVDLFIRTS 215
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
G+ RLS+FLLWQ AY+E F +WPDF+ E HA+ + R RRFGGLS +
Sbjct: 216 GDLRLSNFLLWQSAYAELYFTETHWPDFTPEELAHAIEDFAGRSRRFGGLSAE 268
>gi|253999116|ref|YP_003051179.1| undecaprenyl diphosphate synthase [Methylovorus sp. SIP3-4]
gi|313201217|ref|YP_004039875.1| undecaprenyl diphosphate synthase [Methylovorus sp. MP688]
gi|253985795|gb|ACT50652.1| undecaprenyl diphosphate synthase [Methylovorus sp. SIP3-4]
gi|312440533|gb|ADQ84639.1| undecaprenyl diphosphate synthase [Methylovorus sp. MP688]
Length = 249
Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats.
Identities = 103/236 (43%), Positives = 143/236 (60%), Gaps = 3/236 (1%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
++ P HI +IMDGNGRWA R LPR AGH++G+EV +IV A +G++ LT+FAFS
Sbjct: 14 TAEVPRHIAVIMDGNGRWAKKRFLPRVAGHKRGVEVVRDIVKQCASIGVEYLTLFAFSSE 73
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+S L+ L L++ L KNNI++ +IG+ D+ + + AE TR
Sbjct: 74 NWRRPQEEVSFLMGLFMEALQQEVSKLHKNNIRLVMIGDHSRFDESLREQIARAEALTRD 133
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTGL L IA NY R +I +A+ + + + + +A YL P+PDL I
Sbjct: 134 NTGLTLTIAANYGGRWDILQAVNRL---QAEHPELAGNYNEEHLAPYLSMHYAPEPDLFI 190
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE+R+S+FLLWQ+AYSE F WPDF F ++ Y R+RRFG S++
Sbjct: 191 RTGGEQRISNFLLWQLAYSELYFTDTLWPDFDSAAFELSIASYRQRERRFGRTSEQ 246
>gi|146308070|ref|YP_001188535.1| undecaprenyl pyrophosphate synthetase [Pseudomonas mendocina ymp]
gi|145576271|gb|ABP85803.1| Undecaprenyl pyrophosphate synthetase [Pseudomonas mendocina ymp]
Length = 248
Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats.
Identities = 96/237 (40%), Positives = 141/237 (59%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ P H+ IIMDGN RWA R LP AGH+ G++ ++ AE G++ LT+FAFS
Sbjct: 5 KQGAVPRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAESGVEVLTLFAFSS 64
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP E+ L++L L++ L N+I +R+IG+R ++ ++EAE T
Sbjct: 65 ENWQRPAEEVGALMELFLGALRREAKKLLDNDIGLRIIGDRSRFHPELQAAMREAELLTA 124
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N L IA NY + +I++A + + +++++G + D+ L+ L T D+P PDL
Sbjct: 125 GNRRFTLQIAANYGGQWDIAQAAQRLAREVQAGHLQPEDITPGLLQGCLATGDLPLPDLC 184
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTGGE R+S+FLLWQ+AYSE F YWPDF E AL + R RRFG S++
Sbjct: 185 IRTGGEHRISNFLLWQLAYSELYFSDLYWPDFKHEAMRKALADFATRQRRFGKTSEQ 241
>gi|268593820|ref|ZP_06127987.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae 35/02]
gi|268597737|ref|ZP_06131904.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae FA19]
gi|268547209|gb|EEZ42627.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae 35/02]
gi|268551525|gb|EEZ46544.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae FA19]
Length = 257
Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats.
Identities = 97/238 (40%), Positives = 144/238 (60%), Gaps = 6/238 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ ++ P HI +IMDGNGRWA R LPR GH++G++ +V A++G++ LT+FAFS
Sbjct: 18 LEHTAIPRHIAVIMDGNGRWAKKRFLPRIMGHKRGLDALENMVKHCAKLGVQYLTVFAFS 77
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRRP E+S L+ L L+K L +NN++++++G+R + IL ++EAE T
Sbjct: 78 TENWRRPEDEVSFLMGLFLQALQKQVRRLHENNMRLKILGSRERFNRQILQGIEEAEALT 137
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NTGL L IA +Y R +I +A + + ++ +AK+L D P+PDL
Sbjct: 138 ANNTGLTLSIAADYGGRWDILQAANKLIAEGV------SEITEDTLAKHLMLGDAPEPDL 191
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTGGE R+S+FLLWQ+AY+E F WPDF A+ + R+RRFG S++
Sbjct: 192 FIRTGGETRISNFLLWQMAYAELYFTDILWPDFDETALDAAVASFQKRERRFGRTSEQ 249
>gi|30249676|ref|NP_841746.1| undecaprenyl pyrophosphate synthetase [Nitrosomonas europaea ATCC
19718]
gi|42559796|sp|Q82TZ9|UPPS_NITEU RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|30180713|emb|CAD85625.1| Undecaprenyl pyrophosphate synthetase family [Nitrosomonas europaea
ATCC 19718]
Length = 263
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 99/236 (41%), Positives = 142/236 (60%), Gaps = 3/236 (1%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ + P HI IIMDGNGRWA R LPR AGH +G+E + A E G+ +LTIFAFS
Sbjct: 14 TGAIPKHIAIIMDGNGRWARKRFLPRIAGHTQGVEAVRGTIKACIERGVSHLTIFAFSSE 73
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+ L++L + L++ L +N ++ RVIG+ D I+ +++ E T
Sbjct: 74 NWRRPAEEVKLLMQLFLAALEREVTGLHENGVRFRVIGDISKFDPKIVDFVQQGEALTAG 133
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N+ LN +A NY R +I +A++ + + +V + D IA++L +D P+PDL I
Sbjct: 134 NSRLNFTVAANYGGRWDIMQAVRKMITENPDSAVTFDEPD---IARHLALADAPEPDLFI 190
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE R+S+FLLWQ+AY+E F WPDF A+ Y R+RRFG S++
Sbjct: 191 RTGGECRISNFLLWQLAYTELYFTDTLWPDFDASALDEAIASYRKRERRFGRTSEQ 246
>gi|157372020|ref|YP_001480009.1| undecaprenyl diphosphate synthase [Serratia proteamaculans 568]
gi|157323784|gb|ABV42881.1| undecaprenyl diphosphate synthase [Serratia proteamaculans 568]
Length = 252
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 93/233 (39%), Positives = 138/233 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R GH+ G++ V+ AA + LT++AFS NW R
Sbjct: 16 PRHVAIIMDGNGRWAKRQGKLRVFGHKAGVKSVRRAVSFAANNHLDALTLYAFSSENWNR 75
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
PV E+S L++L L SL K+N+++RVIG+ + ++ +E T N GL
Sbjct: 76 PVQEVSALMELFVRALDSEVKSLHKHNVRLRVIGDISRFSTRLQERIRRSEQLTENNDGL 135
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I + ++ + + ++ GS+ + L+ + + +D+ DL+IRTGG
Sbjct: 136 TLNIAANYGGRWDIIQGVRELAEQVKDGSLRPDQISEELLGERICMNDLSPVDLVIRTGG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
E R+S+FLLWQ+AY+E F WPDF +F ALN + R+RRFGG + G
Sbjct: 196 EHRISNFLLWQIAYAELYFTDVLWPDFDELVFEGALNAFAQRERRFGGTTPIG 248
>gi|221194519|ref|ZP_03567576.1| di-trans,poly-cis-decaprenylcistransferase [Atopobium rimae ATCC
49626]
gi|221185423|gb|EEE17813.1| di-trans,poly-cis-decaprenylcistransferase [Atopobium rimae ATCC
49626]
Length = 260
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 97/239 (40%), Positives = 139/239 (58%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ ++ S P H+ +IMDGNGRWA A+GL R GHR G+ E V A +G+ L+++
Sbjct: 21 LDALDLSRIPAHVSLIMDGNGRWAKAQGLERTKGHRAGVTSLREAVTTAVRLGLDVLSVY 80
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRR E++ L++L L K + N+++R GN +L +
Sbjct: 81 AFSTENWRRSQKEVNFLMQLFAETLIKELPLFHQENVRLRFFGNLEALPKKTYMTFQRGL 140
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T+ NTG+ +A NY +R E++RA + + + GS+ + I K L T+ +PD
Sbjct: 141 TETKDNTGMIFALAVNYGARAELTRAAALLAKQAQEGSIDPEAITPEDIEKNLYTAGLPD 200
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
PDL+IRT GEKRLS++LLWQ+AYSE P WPDF+R F AL Y R+RRFGG
Sbjct: 201 PDLLIRTSGEKRLSNYLLWQIAYSELYITPVLWPDFTRWDFLRALVAYQKRERRFGGAQ 259
>gi|218781001|ref|YP_002432319.1| undecaprenyl diphosphate synthase [Desulfatibacillum alkenivorans
AK-01]
gi|218762385|gb|ACL04851.1| undecaprenyl diphosphate synthase [Desulfatibacillum alkenivorans
AK-01]
Length = 252
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 90/235 (38%), Positives = 140/235 (59%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
P H+ IIMDGNGRWA + + R GH +G E +V E+G+ LT++AFS N
Sbjct: 16 ERLPRHVAIIMDGNGRWAKKKLMNRVKGHEQGAETVRMVVRTTRELGVPFLTLYAFSTEN 75
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W+RP +E+ L+ L+K FL + +N I++ VIG L DD+ + + T
Sbjct: 76 WQRPKAEVMALMTLLKRFLVNEKKEMLENGIRLNVIGQTERLPDDVKAAMNHTMEATAQG 135
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+ L +A +Y R+E+ RA + + + + ++ +D S+I+++L T+ +PDPDL+IR
Sbjct: 136 RKMTLTLALSYGGREELVRAFRKMAKRVADHTLDPELIDESVISQHLYTATMPDPDLMIR 195
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
T GE R+S+FLLWQ+AY+E F P+ WPDFS+E + L + R+RRFG +
Sbjct: 196 TSGEVRISNFLLWQLAYAEMAFTPKLWPDFSKEDYIQILKDFGDRERRFGKTGDQ 250
>gi|15676113|ref|NP_273244.1| undecaprenyl pyrophosphate synthetase [Neisseria meningitidis MC58]
gi|254805770|ref|YP_003083991.1| undecaprenyl pyrophosphate synthetase [Neisseria meningitidis
alpha14]
gi|42559884|sp|Q9K1G6|UPPS_NEIMB RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|7225405|gb|AAF40643.1| undecaprenyl pyrophosphate synthetase [Neisseria meningitidis MC58]
gi|254669312|emb|CBA08317.1| undecaprenyl pyrophosphate synthetase [Neisseria meningitidis
alpha14]
gi|261391722|emb|CAX49171.1| undecaprenyl pyrophosphate synthetase (UPP synthetase;
di-trans,poly-cis-decaprenylcistransferase; undecaprenyl
diphosphate synthase; UDS) [Neisseria meningitidis 8013]
gi|308388404|gb|ADO30724.1| putative undecaprenyl diphosphate synthase [Neisseria meningitidis
alpha710]
gi|316985711|gb|EFV64657.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
H44/76]
gi|325131043|gb|EGC53768.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis
OX99.30304]
gi|325133100|gb|EGC55772.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis M6190]
gi|325139078|gb|EGC61624.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis
ES14902]
gi|325141200|gb|EGC63700.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis CU385]
gi|325145383|gb|EGC67660.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis
M01-240013]
gi|325197473|gb|ADY92929.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis G2136]
gi|325199399|gb|ADY94854.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis H44/76]
gi|325202979|gb|ADY98433.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis
M01-240149]
gi|325205279|gb|ADZ00732.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis
M04-240196]
gi|325207223|gb|ADZ02675.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis
NZ-05/33]
Length = 248
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 98/240 (40%), Positives = 146/240 (60%), Gaps = 6/240 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + ++ P HI +IMDGNGRWA R LPR GH++G++ +V A++G++ LT+FA
Sbjct: 7 AVLEHTAIPKHIAVIMDGNGRWAKKRFLPRIMGHKRGLDALENMVKHCAKLGVQYLTVFA 66
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP E+S L+ L L+K L +NN++++++G+R + IL ++EAE
Sbjct: 67 FSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNMRLKILGSRERFNRQILQGIEEAEA 126
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTGL L IA +Y R +I +A + + ++ +AK+L D P+P
Sbjct: 127 LTANNTGLTLSIAADYGGRWDILQAANKLIAEGV------SEITEDTLAKHLMLGDAPEP 180
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL IRTGGE R+S+FLLWQ+AY+E F WPDF + A+ + R+RRFG S++
Sbjct: 181 DLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDGKALDDAVASFQKRERRFGRTSEQ 240
>gi|291523273|emb|CBK81566.1| undecaprenyl diphosphate synthase [Coprococcus catus GD/7]
Length = 245
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 106/231 (45%), Positives = 152/231 (65%), Gaps = 3/231 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P+H+ II+DGNGRWA R +PR GH +G + E+ A ++GIK T++AFS NW
Sbjct: 18 NVPEHVAIILDGNGRWAKKRFMPRNYGHMQGAKTVEEMCEVARDLGIKYFTVYAFSTENW 77
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP SE+ L+KL++ ++ KNN++VRVIG++ L +DI + + E + NT
Sbjct: 78 KRPQSEVDALMKLLRKYMVDSLERTAKNNMRVRVIGDKTGLSEDIQKSIADVETASAGNT 137
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GLN IA NY SRDE+ RA+K + D ++ +L YLDT+ +PDPDL+IRT
Sbjct: 138 GLNFTIAINYGSRDEMIRAMKKMLADGH---TNPGEMSEALFEHYLDTAGMPDPDLVIRT 194
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE+R+S+FLLWQ+AYSEF F P WPD+++E A+ Y+ RDRRFGG+
Sbjct: 195 SGEQRVSNFLLWQMAYSEFYFTPVLWPDYNKETMIEAIRAYSKRDRRFGGV 245
>gi|261749607|ref|YP_003257293.1| undecaprenyl diphosphate synthase [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
gi|261497700|gb|ACX84150.1| undecaprenyl diphosphate synthase [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
Length = 246
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 92/238 (38%), Positives = 137/238 (57%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + ++ P H+ IIMDGNGRWA RG R GH+ ++ + + E+GI +T++
Sbjct: 8 IRKIDLNNIPHHVAIIMDGNGRWAEKRGQLRTFGHQNAMQSVRDSINGCKELGIPYMTLY 67
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
FS NW RP EI +L+ L S LK + +N+++ IG D I L
Sbjct: 68 VFSSENWNRPKKEIDDLMHLFHSSLKNHLEEIHDSNVRIIPIGEVEKFSDVIQEELFFFR 127
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T+ NT + L +A +Y +R+EI RA K I + + G + D+D+S +L T ++PD
Sbjct: 128 KKTKHNTSVTLILALSYGAREEILRATKTIAKKVCMGHLSLGDIDNSSFKNHLYTKEIPD 187
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DL+IRT GE+R+S+FLLWQ AY+E F WPDF ++ FF A+ Y R RRFG +
Sbjct: 188 VDLLIRTSGEQRISNFLLWQSAYAELYFTKVLWPDFRKKDFFKAIINYQKRQRRFGKV 245
>gi|56696547|ref|YP_166904.1| undecaprenyl diphosphate synthase [Ruegeria pomeroyi DSS-3]
gi|56678284|gb|AAV94950.1| undecaprenyl diphosphate synthase [Ruegeria pomeroyi DSS-3]
Length = 243
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 109/234 (46%), Positives = 148/234 (63%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S P H+ IIMDGNGRWA ARG PR GH G E+V A ++GIK LTIFAFS
Sbjct: 9 PGSGPRHVAIIMDGNGRWAQARGRPRLFGHHAGARRVREVVEACPQLGIKYLTIFAFSTE 68
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW+R E++ L+ L + ++ K +L ++VR IG+R+ LD ++ ++ E+QTR
Sbjct: 69 NWKRTQVEVAGLMSLFRRYIAKETRALHARGVRVRFIGDRVRLDAKLIALMDTLEEQTRE 128
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N G+ L IA NY RDE++RA + + +D+ G + DVD + +YLDT +PDPDL+I
Sbjct: 129 NDGVQLTIALNYGGRDEVARATRRLARDVAEGRLKPEDVDEETLPRYLDTRVLPDPDLVI 188
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RT GE R+S+FLLWQ AYSE+ FI WPDF+ E Y RDRRFG ++
Sbjct: 189 RTSGEARISNFLLWQSAYSEYEFIDTLWPDFTAEELARLCQSYGSRDRRFGAVT 242
>gi|257869601|ref|ZP_05649254.1| undecaprenyl pyrophosphate synthetase [Enterococcus gallinarum EG2]
gi|257803765|gb|EEV32587.1| undecaprenyl pyrophosphate synthetase [Enterococcus gallinarum EG2]
Length = 265
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 100/238 (42%), Positives = 144/238 (60%), Gaps = 5/238 (2%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HI IIMDGNGRWA R LPR AGH++G+E I A+ +G+K LT++AFS NW
Sbjct: 25 PVPQHIAIIMDGNGRWAQNRRLPRVAGHKEGMETVKTITTHASRLGVKVLTLYAFSTENW 84
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP E+ L++L F L K N+KV V+G L + A +QT+ NT
Sbjct: 85 KRPNEEVDYLMQLPVDFFDTFVPELIKENVKVHVMGFTEYLPAHTQDAVNRAIEQTKENT 144
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDL 184
G+ L A NY SR E+ +AI+ ++++++ + ++ ++L T +P DP+L
Sbjct: 145 GMVLNFALNYGSRAEMLQAIQKLYEELDHTQETVE-ITEEMMDQHLMTGFLPAALRDPEL 203
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IRT GE+R+S+FLLWQ+AYSE F WPDF +L A+ + R+RRFGGL+KK
Sbjct: 204 VIRTSGEERISNFLLWQIAYSELFFTKALWPDFDAQLLEAAIGSFQQRNRRFGGLNKK 261
>gi|120599548|ref|YP_964122.1| undecaprenyl diphosphate synthase [Shewanella sp. W3-18-1]
gi|146292455|ref|YP_001182879.1| undecaprenyl diphosphate synthase [Shewanella putrefaciens CN-32]
gi|120559641|gb|ABM25568.1| Undecaprenyl pyrophosphate synthetase [Shewanella sp. W3-18-1]
gi|145564145|gb|ABP75080.1| Undecaprenyl pyrophosphate synthetase [Shewanella putrefaciens
CN-32]
gi|319425757|gb|ADV53831.1| undecaprenyl diphosphate synthase [Shewanella putrefaciens 200]
Length = 275
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 91/241 (37%), Positives = 145/241 (60%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ ++ S P H+ IIMDGNGRWA +G PR GH+ G++ V+ A+++GI++LT+F
Sbjct: 28 LPELVKQSLPKHVAIIMDGNGRWAQTQGKPRVMGHKAGVKAVRRAVSTASQLGIQSLTLF 87
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP E+S L++L + L++ L KN +K+ +IG+ + + A+
Sbjct: 88 AFSSENWRRPDKEVSLLMELFFTVLQREIKLLHKNQVKLNIIGDISRFSVRLQKQISAAQ 147
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T NTGL L +A NY R +I +A + + + + +G + S ++ +L + +
Sbjct: 148 EKTAANTGLILNVAANYGGRWDILQAAQKLAEKVATGEMTSSQFTEEALSAHLCMQNQSE 207
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRTGG+ R+S+F+LWQ AY+E VFI WPDF + F A+ + R RRFG
Sbjct: 208 VDLMIRTGGDCRISNFVLWQAAYAELVFIDTLWPDFDEQAFHEAIAIFASRQRRFGLTGS 267
Query: 242 K 242
+
Sbjct: 268 Q 268
>gi|318040224|ref|ZP_07972180.1| undecaprenyl pyrophosphate synthase [Synechococcus sp. CB0101]
Length = 245
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 89/240 (37%), Positives = 136/240 (56%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ A + + P H+ +IMDGNGRWA R LPR GHR+G+E + ++ GI LT
Sbjct: 2 LPAGLDPARLPAHVAVIMDGNGRWANQRKLPRVMGHREGVEALKRTLRLCSDWGIGALTA 61
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP E+S L+ L + L + +L++ +++R +G+ L D + ++ +A
Sbjct: 62 YAFSTENWSRPGEEVSFLMALFERVLARELQALEEEQVRIRFLGDLEQLPDGLQQLIADA 121
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+T NTG++ + NY R E+ RA + + + + G + + A L T+
Sbjct: 122 TQRTAANTGIHFNVCTNYGGRRELVRAARLLAEQVARGELDPAAITEQHFAAELFTTGEV 181
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GE+R+S+FLLWQ+AY+E WPDF+ AL Y R RRFGG+
Sbjct: 182 DPDLLIRTSGEQRISNFLLWQLAYAELHITDVLWPDFNEAALTAALLDYQSRQRRFGGVE 241
>gi|260434697|ref|ZP_05788667.1| undecaprenyl pyrophosphate synthetase 1 [Synechococcus sp. WH 8109]
gi|260412571|gb|EEX05867.1| undecaprenyl pyrophosphate synthetase 1 [Synechococcus sp. WH 8109]
Length = 260
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 89/239 (37%), Positives = 139/239 (58%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ A + P H+ +IMDGNGRWA +RGLPR GHR G+E + ++ GI+ LT
Sbjct: 17 LPADLDPGRLPQHVALIMDGNGRWAKSRGLPRVMGHRAGVEALKATLRLCSDWGIQALTA 76
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP E++ L+ L + L+ +L+ +++R +G+ +L + ++ +A
Sbjct: 77 YAFSTENWSRPGEEVNFLMTLFERVLQAELQALEAEQVRIRFLGDLKALPQKLQELIADA 136
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+T N G++ + NY R E+ +A + + Q +G + ++D + IA L T+
Sbjct: 137 TARTAGNNGIHFNVCTNYGGRRELVQAAQRLAQRAAAGELDPDNIDENSIAAELFTAGEQ 196
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRT GE R+S+FLLWQ+AY+E WPDF+ + AL + R RRFGGL
Sbjct: 197 DPDLLIRTSGEHRISNFLLWQLAYAEIHVTDVLWPDFNADALKAALLDFQRRHRRFGGL 255
>gi|330872735|gb|EGH06884.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 251
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 95/241 (39%), Positives = 147/241 (60%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ S SS P H+ IIMDGN RWA R LP AGH+ G++ ++ AE ++ LT+F
Sbjct: 4 IKSAGPSSVPRHVAIIMDGNNRWARKRLLPGVAGHKAGVDAVRAVIEVCAEAKVEVLTLF 63
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E+ L++L + L++ L +N+I +R+IG+R ++ ++EAE
Sbjct: 64 AFSSENWQRPAEEVGALMELFFTALRRETKRLNENDISLRIIGDRSRFHPELQAAMREAE 123
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T N+ L IA NY + +I++A + + +++++G + D+ L+ L T D+P
Sbjct: 124 VRTSGNSRFVLQIAANYGGQWDIAQAAQRLAREVQAGHLQPEDITPELLQTCLATGDLPL 183
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL IRTGGE R+S+FLLWQ+AY+E F +WPDF + AL + R RRFG S+
Sbjct: 184 PDLCIRTGGEHRISNFLLWQLAYAELYFSDLFWPDFKHDAMRAALADFASRQRRFGKTSE 243
Query: 242 K 242
+
Sbjct: 244 Q 244
>gi|269217143|ref|ZP_06160997.1| di-trans,poly-cis-decaprenylcistransferase [Slackia exigua ATCC
700122]
gi|269129280|gb|EEZ60365.1| di-trans,poly-cis-decaprenylcistransferase [Slackia exigua ATCC
700122]
Length = 259
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 100/239 (41%), Positives = 136/239 (56%), Gaps = 2/239 (0%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
++ + P+HI +IMDGNGRWA R L R GH+ GIE E + A++ G++ LT++A
Sbjct: 20 EALDEARVPEHIAVIMDGNGRWAKKRALNRLRGHKAGIEAVRETIRCASDAGVRYLTVYA 79
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW+RP E+ L+ L + L + N++VR IG+ L +D A D
Sbjct: 80 FSTENWKRPDDEVVGLMNLFAKTMLAEVDGLDEENVRVRTIGDLSLLPEDTRAAFGRAWD 139
Query: 123 QTRLNTGLNLFIAFNYSSRDEIS--RAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
QT NTG+ L +A NY SR+EI +G + DV L + L T+ +P
Sbjct: 140 QTCGNTGMTLNVAVNYGSREEIMRAVRAVADAAVAAAGRGEARDVTPELFERGLYTAGIP 199
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRT GE R+S+FLLWQVAY+EF WPDF R AL + RDRRFGG+
Sbjct: 200 DPDLVIRTSGEHRISNFLLWQVAYAEFYVTDVLWPDFDRYELLRALLDFQHRDRRFGGV 258
>gi|261822594|ref|YP_003260700.1| undecaprenyl diphosphate synthase [Pectobacterium wasabiae WPP163]
gi|261606607|gb|ACX89093.1| undecaprenyl diphosphate synthase [Pectobacterium wasabiae WPP163]
Length = 253
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 91/230 (39%), Positives = 138/230 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG R GH+ G++ V+ A G+ LT++AFS NW R
Sbjct: 17 PRHVAIIMDGNGRWAKNRGKMRIFGHQAGVKAVRRSVSFAVSQGLDALTLYAFSSENWNR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L++L L SL K+N+++RVIG+ + ++ +E T N GL
Sbjct: 77 PAQEVSALMELFVRALDSEVKSLHKHNVRLRVIGDIGRFSPRLQERIRRSETLTEKNQGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I + ++ + + ++ G + ++ + + +Y+ +D+ DL+IRTGG
Sbjct: 137 TLNIAANYGGRWDIIQGVRQLAEQVQEGILRPDSINEASLCQYICLNDLAPVDLVIRTGG 196
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E R+S+FLLWQ+AY+E F WPDF ++F ALN + R+RRFGG +
Sbjct: 197 EHRISNFLLWQIAYAELYFTDVLWPDFDEQVFEGALNAFAQRERRFGGTT 246
>gi|310827161|ref|YP_003959518.1| di-trans-poly-cis-decaprenylcistransferase [Eubacterium limosum
KIST612]
gi|308738895|gb|ADO36555.1| di-trans-poly-cis-decaprenylcistransferase [Eubacterium limosum
KIST612]
Length = 238
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 99/234 (42%), Positives = 141/234 (60%), Gaps = 4/234 (1%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ + P HI IIMDGNGRWA R PR GH G++ + V A+++GIK LT++AF
Sbjct: 7 NISEENMPVHIAIIMDGNGRWAKQRRKPRLFGHNAGMKALHNTVHLASDMGIKILTVYAF 66
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+++ + K L +N+++VR+IG + L D+ AE
Sbjct: 67 STENWKRSQEEVDGLMRIAVEYFMKEIAELHRNHVQVRIIGEKSRLPKDVQKSADNAESL 126
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N GL L +A NY RDEI A++ +I DV +I+ +L T D+PDPD
Sbjct: 127 TKDNDGLILNVALNYGGRDEIVHAVR----EIMEEGTAPGDVTEEMISAHLYTRDLPDPD 182
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
++IRTGGE RLS+FLLWQ AY+EF F +WPDF + F+ + Y R+RRFG
Sbjct: 183 IMIRTGGESRLSNFLLWQNAYTEFFFDDIWWPDFDDDAFYKLIEAYQQRNRRFG 236
>gi|110633738|ref|YP_673946.1| undecaprenyl pyrophosphate synthetase [Mesorhizobium sp. BNC1]
gi|110284722|gb|ABG62781.1| Undecaprenyl pyrophosphate synthetase [Chelativorans sp. BNC1]
Length = 237
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 117/233 (50%), Positives = 162/233 (69%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA ARGLPR AGHR G+E V AA E+GI+ LT++AFS NW R
Sbjct: 3 PAHIAIIMDGNGRWARARGLPRSAGHRAGVEALRRTVRAAGEMGIRWLTVYAFSSENWSR 62
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SEIS+L+ L+K F+++ L ++ ++VR++G+R L+ DI +L EAE+ T NT +
Sbjct: 63 PKSEISDLMGLLKLFIRRDLAELHQSGVRVRIVGSREGLEPDISALLLEAENLTAGNTNM 122
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL +AFNY SRDEI RA + + + ++G + + + + LDT +PDPDLIIRT G
Sbjct: 123 NLAVAFNYGSRDEILRAARAVALEAKAGRLDPEKMTAEEFSARLDTVGMPDPDLIIRTSG 182
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
E+RLS+FLLWQ AY+EFVF+P +WPDF A++ + RDRRFG ++++
Sbjct: 183 EQRLSNFLLWQAAYTEFVFLPCHWPDFGPGDLAAAISLFEERDRRFGSIAQEA 235
>gi|212223519|ref|YP_002306755.1| undecaprenyl diphosphate synthase [Thermococcus onnurineus NA1]
gi|212008476|gb|ACJ15858.1| undecaprenyl diphosphate synthase [Thermococcus onnurineus NA1]
Length = 264
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 93/240 (38%), Positives = 136/240 (56%), Gaps = 2/240 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + P H+ IIMDGN RWA P GH G EI+ E+GI+ LT+
Sbjct: 25 LLDKVKGGRIPKHVAIIMDGNRRWARKLEKPPWYGHLFGSRKLEEILEWCRELGIRTLTV 84
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFS N+RR E++ L+ L + ++ + K I+V VIG + L +++ +
Sbjct: 85 YAFSTENFRRSPEEVNALMNLFEEKFRELVNDERIHKYGIRVNVIGRKELLPENVREAAE 144
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
EAE TR L IA Y R EI+ A+K I D+ +G + D+D LI KYL +
Sbjct: 145 EAERVTRKYNNYTLNIALAYGGRSEIADAVKEIVDDVLAGKISREDIDEDLIKKYLYYPN 204
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+PDPD++IRTGGE R+S+FLL+Q+AYSE F+ Y+P+F + F + +Y R RRFG
Sbjct: 205 MPDPDIVIRTGGEVRISNFLLYQIAYSELFFVDVYFPEFRKIDFLRIIREYQKRQRRFGR 264
>gi|57641108|ref|YP_183586.1| undecaprenyl diphosphate synthase [Thermococcus kodakarensis KOD1]
gi|73920272|sp|Q5JGE1|UPPS_PYRKO RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|57159432|dbj|BAD85362.1| undecaprenyl diphosphate synthase [Thermococcus kodakarensis KOD1]
Length = 264
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 88/240 (36%), Positives = 138/240 (57%), Gaps = 2/240 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + S + P H+ IIMDGN RWA P GH G + EI+ E+ I+ LT+
Sbjct: 25 LLEKVKSGNIPKHVAIIMDGNRRWARKLEKPPWYGHLFGSKKLEEILEWCRELNIRTLTV 84
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFS N++R E+ L+ L + K+ + + I+V V+G + L +++ +
Sbjct: 85 YAFSTENFKRSKEEVEALMNLFEEKFKELVQDERVHRYGIRVNVLGRKDMLPENVRKAAE 144
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
EAE TR + NL IA Y R EI+ A++ I +D+ G + D+D I +YL +
Sbjct: 145 EAERATRKYSNYNLNIALAYGGRSEIADAVREIVRDVLEGKIKPEDIDEEAIKRYLYYPN 204
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+PDPD++IRTGGE R+S+FLL+Q+AYSE F+ Y+P+F + F + ++ R RRFG
Sbjct: 205 MPDPDIVIRTGGEVRISNFLLYQIAYSELFFVDVYFPEFRKIDFLRIIREFQKRQRRFGR 264
>gi|320540037|ref|ZP_08039693.1| undecaprenyl pyrophosphate synthase [Serratia symbiotica str.
Tucson]
gi|320029886|gb|EFW11909.1| undecaprenyl pyrophosphate synthase [Serratia symbiotica str.
Tucson]
Length = 259
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 91/229 (39%), Positives = 137/229 (59%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA +G R GH+ G++ V+ AA ++ LT++AFS NW R
Sbjct: 17 RHVAIIMDGNGRWAKRQGKLRVFGHKAGVKSVRRAVSFAASNRLEALTLYAFSSENWNRS 76
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
+ E+S L++L L SL K+N+++RVIG+ + + +E T+ N GL
Sbjct: 77 IQEVSALMELFVHALDSELKSLHKHNVRLRVIGDISRFSKRLQGRIHRSEQLTKNNNGLT 136
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L IA NY R +I + +K + + ++ G + S + L+++ + SD+ DL+IRTGGE
Sbjct: 137 LNIAANYGGRWDIIQGVKKLAEQVQGGMLRSDQISEELLSQCVCMSDLAPVDLVIRTGGE 196
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
R+S+FLLWQ+AY+E F WPDF +F ALN + R+RRFGG +
Sbjct: 197 HRISNFLLWQIAYAELYFTDVLWPDFDEHVFEDALNAFAQRERRFGGTT 245
>gi|257867710|ref|ZP_05647363.1| undecaprenyl pyrophosphate synthetase [Enterococcus casseliflavus
EC30]
gi|257874037|ref|ZP_05653690.1| undecaprenyl pyrophosphate synthetase [Enterococcus casseliflavus
EC10]
gi|257801793|gb|EEV30696.1| undecaprenyl pyrophosphate synthetase [Enterococcus casseliflavus
EC30]
gi|257808201|gb|EEV37023.1| undecaprenyl pyrophosphate synthetase [Enterococcus casseliflavus
EC10]
Length = 266
Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 102/238 (42%), Positives = 145/238 (60%), Gaps = 4/238 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HI IIMDGNGRWA R LPR AGH++G+E +I A+ +G+K LT++AFS NW
Sbjct: 25 PIPQHIAIIMDGNGRWAQNRRLPRVAGHKEGMETVKKITKHASHLGVKVLTLYAFSTENW 84
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP E+ L++L F L K N++V+V+G SL + +K A DQT+ NT
Sbjct: 85 KRPNEEVDFLMQLPVDFFDTFVPELIKENVQVKVMGFTESLPEHTQEAVKRAIDQTKDNT 144
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDL 184
G+ L A NY SR EI A++ +++++ + + ++A +L T +P DP+L
Sbjct: 145 GMILNFALNYGSRAEILTAVQALYEELAASEEALPKLTEDMLATHLMTGFLPNALRDPEL 204
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IRT GE+R+S+FLLWQ+AYSE F WPDF L A+ + R+RRFGGL K
Sbjct: 205 VIRTSGEERISNFLLWQIAYSELFFTKALWPDFDAALLEDAIGSFQQRNRRFGGLKMK 262
>gi|71907376|ref|YP_284963.1| undecaprenyl pyrophosphate synthetase [Dechloromonas aromatica RCB]
gi|71846997|gb|AAZ46493.1| Undecaprenyl pyrophosphate synthetase [Dechloromonas aromatica RCB]
Length = 253
Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 98/236 (41%), Positives = 145/236 (61%), Gaps = 3/236 (1%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+++ P H+ +IMDGNGRWA R LPR AGH KG+E+ E+V A E G++ LT+FAFS
Sbjct: 14 AAAVPKHVAVIMDGNGRWAKKRFLPRVAGHVKGVELVREMVRACLERGVQYLTLFAFSSE 73
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E++ L++L L++ L +N +++RVIG+ + + ++++AE +T
Sbjct: 74 NWRRPQEEVTLLMQLFVKALEQEVEKLDRNGVRLRVIGDLERFEPRLQELIRQAEAKTAG 133
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NT L+L IA NY R +I +A + + D + +L S P+PDL I
Sbjct: 134 NTRLDLTIAANYGGRWDIMQATNQMLAAHPEKRAGWQECD---LEPHLSMSFAPEPDLFI 190
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE+R+S+FLLWQ+AY+E F P WPDF F A+ + R+RRFG S++
Sbjct: 191 RTGGEERISNFLLWQLAYTELYFTPTLWPDFDTTEFDKAIVSFQQRERRFGRTSEQ 246
>gi|168335175|ref|ZP_02693281.1| undecaprenyl diphosphate synthase [Epulopiscium sp. 'N.t.
morphotype B']
Length = 232
Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 106/230 (46%), Positives = 144/230 (62%), Gaps = 2/230 (0%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IMDGNGRWA ++ LPR AGH+KG E +IV AA + IK +T + FS NW
Sbjct: 4 VPKHVAFIMDGNGRWAKSKKLPRSAGHKKGSETLRDIVEYAATLKIKYITAYTFSTENWS 63
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+S ++ L++ +L KK +IK+RVIG L D I+ +K+ E T+ G
Sbjct: 64 RPKEEVSAIMTLLEDYLDDALKKSKKRDIKIRVIGKLEGLSDSIIHKIKKLELITKDKPG 123
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L + A NY RDEI RA K I + + G++ ++ + A++LDT +VPDPD +IRT
Sbjct: 124 LCVIFAINYGGRDEIVRATKIIAEKFKQGTIT--EITEEVFAQFLDTGNVPDPDFLIRTS 181
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE R S+FL WQ+AYSEF F ++WPDFS+E F AL +Y R RRFG
Sbjct: 182 GELRTSNFLPWQLAYSEFYFTDKHWPDFSKEDFDLALLEYANRKRRFGKT 231
>gi|283856412|ref|YP_162887.2| undecaprenyl pyrophosphate synthase [Zymomonas mobilis subsp.
mobilis ZM4]
gi|292495052|sp|Q9X5F1|UPPS_ZYMMO RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|283775412|gb|AAV89776.2| undecaprenyl diphosphate synthase [Zymomonas mobilis subsp. mobilis
ZM4]
Length = 248
Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 107/230 (46%), Positives = 152/230 (66%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IIMDGNGRWA+AR LPR AGH+KG + V AAAE+GI+ LT++AFS NWR
Sbjct: 19 VPRHVAIIMDGNGRWASARHLPRIAGHKKGADAVKTTVRAAAEMGIEVLTLYAFSSENWR 78
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP SE+++L+ L++ L++ +++K+ I ++VIG+ LD D++ +L +A + T NT
Sbjct: 79 RPASEVADLMGLLRLCLRQEMHNIKERGICLKVIGDYTRLDQDLVALLNQAIEITANNTR 138
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L A NY ++DE+ K I + + G + ++D I L T D+P DL+IRT
Sbjct: 139 LTLVFALNYGAQDELVHVTKRIAEKAKEGQLDPENIDVGTIESLLYTHDLPPLDLVIRTS 198
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GEKRLS+FLLWQ AY+E +FI WPDF E A+ +Y R+RR+GGL
Sbjct: 199 GEKRLSNFLLWQAAYAELLFIDTLWPDFGSETLKAAVEEYARRERRYGGL 248
>gi|325143200|gb|EGC65540.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis
961-5945]
Length = 248
Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 99/240 (41%), Positives = 146/240 (60%), Gaps = 6/240 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + ++ P HI +IMDGNGRWA R LPR GH++G++ +V A++G++ LT+FA
Sbjct: 7 AVLEHTAIPKHIAVIMDGNGRWAKKRFLPRIMGHKRGLDALENMVRHCAKLGVQYLTVFA 66
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP E+S L+ L L+K L +NN++++++G+R + IL ++EAE
Sbjct: 67 FSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNMRLKILGSRERFNRQILQGIEEAEA 126
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTGL L IA +Y R +I +A + + ++ +AKYL D P+P
Sbjct: 127 LTANNTGLTLSIAADYGGRWDILQAANKLIAEGV------SEITEDTLAKYLMLGDAPEP 180
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL IRTGGE R+S+FLLWQ+AY+E F WPDF + A+ + R+RRFG S++
Sbjct: 181 DLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDGKALDDAVASFQKRERRFGRTSEQ 240
>gi|254486469|ref|ZP_05099674.1| undecaprenyl pyrophosphate synthetase 1 [Roseobacter sp. GAI101]
gi|214043338|gb|EEB83976.1| undecaprenyl pyrophosphate synthetase 1 [Roseobacter sp. GAI101]
Length = 246
Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 105/233 (45%), Positives = 150/233 (64%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ IIMDGNGRWA RG PR GH G + EIV A G++ LTIFAFS NW
Sbjct: 14 GAPRHVAIIMDGNGRWATQRGRPRLFGHHAGAKRVREIVEACPHFGVEYLTIFAFSTENW 73
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+R E++ L+ L + ++ K +L + ++VR IG+R+ LD ++ ++ E+ T NT
Sbjct: 74 KRTQVEVAGLMSLFRRYISKETRALSEYGVRVRFIGDRVKLDKKLIKLMHVLEEATEHNT 133
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
++L IA NY RDE++RA + + +D+ +G + DVD + +YLDT +PDPDL+IRT
Sbjct: 134 RVHLTIALNYGGRDEVARATQRLAEDVAAGLLDPKDVDEETLPRYLDTHVLPDPDLVIRT 193
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
GE R+S+FLLWQ AY+E+ FI WPDFS+E F + +RDRRFG ++K
Sbjct: 194 SGEARISNFLLWQSAYAEYEFIDTLWPDFSKEEFGRLCAAFGVRDRRFGAVTK 246
>gi|295110295|emb|CBL24248.1| undecaprenyl diphosphate synthase [Ruminococcus obeum A2-162]
Length = 235
Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 106/232 (45%), Positives = 151/232 (65%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P+HI II+DGNGRWA A+G+PR GH KG +I ++G+K LT++AFS NW
Sbjct: 2 KVPNHIAIILDGNGRWAKAKGMPRGYGHIKGCANLEDICDDIKDLGVKYLTVYAFSTENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+R E+ L+KL +S+LKK S +KN+++V++IG+ + DI ++E E+ ++
Sbjct: 62 KRSREEVEGLMKLFRSYLKKCMKSAEKNHMRVKIIGDPSAFAPDIQDKIRELEEFSKDYD 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
L IA NY SRDEI R ++ + QD+ G ++D YLDT+ VPDPDL+IRT
Sbjct: 122 ELYFQIALNYGSRDEIIRGVRKLAQDVADGKCDPAEIDEPFFESYLDTAGVPDPDLLIRT 181
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
GE+RLS+FL+WQ+AY+EF F WPDF +E A+ +YN RDRRFGG+
Sbjct: 182 SGEQRLSNFLMWQLAYTEFYFTDVPWPDFHKEDLIKAIEKYNSRDRRFGGVK 233
>gi|294674924|ref|YP_003575540.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella ruminicola
23]
gi|294473551|gb|ADE82940.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella ruminicola
23]
Length = 247
Score = 286 bits (731), Expect = 3e-75, Method: Composition-based stats.
Identities = 95/242 (39%), Positives = 142/242 (58%), Gaps = 2/242 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + + P HI IIMDGNGRWA RG R GH+ G++ I + +G+K LT+
Sbjct: 1 MKELLDMNRIPQHIAIIMDGNGRWAMERGKDRSFGHQAGVDAVRRITSECTRLGVKFLTL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW RP E++ L+ L+ + L+ KNN++ RV+G+R + D + L E
Sbjct: 61 YTFSTENWNRPADEVAALMGLVLTSLEDEI--FMKNNVRFRVVGDRSRIPDTVNKKLAET 118
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E+ T N + + +A +YSS+ E++ A K I Q+++ G + + + I + L T+ +P
Sbjct: 119 EEHTAKNDAMTMVVALSYSSKLELTTATKQIAQEVKEGKLDVNSITEETINERLWTNFMP 178
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DP+L+IRTGGE R+S++LLWQ+AYSE F YWPDF E A+ Y R RRFG
Sbjct: 179 DPELLIRTGGEIRISNYLLWQIAYSELYFCDTYWPDFMEEDLHKAIYSYQSRQRRFGKTE 238
Query: 241 KK 242
+
Sbjct: 239 AQ 240
>gi|308185745|ref|YP_003929876.1| undecaprenyl pyrophosphate synthetase [Pantoea vagans C9-1]
gi|308056255|gb|ADO08427.1| undecaprenyl pyrophosphate synthetase [Pantoea vagans C9-1]
Length = 250
Score = 286 bits (731), Expect = 3e-75, Method: Composition-based stats.
Identities = 92/238 (38%), Positives = 138/238 (57%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ P H+ IIMDGNGRWA +G R +GH+ G++ V+ A ++ LT++AFS
Sbjct: 12 QQGNGPRHVAIIMDGNGRWAKNQGKLRISGHKAGVKSVRRAVSFAVSNNLEALTLYAFSS 71
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E++ L++L L SL K+N+++RVIG+ I ++ +E T
Sbjct: 72 ENWSRPAQEVTALMELFVWALDSEVKSLHKHNVRLRVIGDTSRFSPRIQERIRRSETLTA 131
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N+GL L IA NY R +I +K + + ++ G + + + L ++ DL+
Sbjct: 132 NNSGLTLNIAANYGGRWDIIEGVKKLAEQVQEGLLRPDQITEESLTSQLCMQELAPVDLV 191
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
IRTGGE R+S+FLLWQ+AY+EF F WPDF +F ALN ++LR+RRFGG + G
Sbjct: 192 IRTGGEHRISNFLLWQIAYAEFYFTDVLWPDFDEHVFEGALNAFSLRERRFGGAAPGG 249
>gi|311694061|gb|ADP96934.1| undecaprenyl diphosphate synthase [marine bacterium HP15]
Length = 256
Score = 286 bits (731), Expect = 3e-75, Method: Composition-based stats.
Identities = 98/238 (41%), Positives = 146/238 (61%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + S P H+ IIMDGN RWA AR L AGH+ G++ +V A G++ LT+FAFS
Sbjct: 11 VSADSRPRHVAIIMDGNNRWAKARRLKGVAGHKAGVDAVRAVVETCAREGVEVLTLFAFS 70
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRRP E+S L+KL L++ L +N+I++R+IG+R + + ++ AE+ T
Sbjct: 71 SENWRRPKDEVSALMKLFLFALEREVRKLHRNDIRLRIIGDRSAFSASLREHMEAAEELT 130
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
R N+ + L IA NY +I++A + + + + SG + D+ LI ++L D+P PDL
Sbjct: 131 RNNSRMTLVIAANYGGHWDITQATRKVAEQVRSGQLAPSDITDDLIQQHLSIGDLPMPDL 190
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IRT GE+R+S+F+LW +AY+E F P YWPDF +E AL Y R RRFG +
Sbjct: 191 MIRTAGEQRISNFMLWHLAYTELYFSPVYWPDFQQEEMLKALQAYAGRQRRFGQTDDQ 248
>gi|302187902|ref|ZP_07264575.1| undecaprenyl pyrophosphate synthetase [Pseudomonas syringae pv.
syringae 642]
Length = 251
Score = 286 bits (731), Expect = 3e-75, Method: Composition-based stats.
Identities = 94/241 (39%), Positives = 146/241 (60%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + SS P H+ IIMDGN RWA R LP AGH+ G++ ++ AE ++ LT+F
Sbjct: 4 IKPAVPSSVPRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAEARVEVLTLF 63
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E+ L++L + L++ L +N I +R+IG+R ++ ++EAE
Sbjct: 64 AFSSENWQRPAEEVGALMELFFTALRRETKRLNENEISLRIIGDRSRFHPELQAAMREAE 123
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T N+ L IA NY + +I++A + + +++++G + D+ L+ L T D+P
Sbjct: 124 VRTSGNSRFVLQIAANYGGQWDIAQAAQRLAREVQAGHLQPEDITPELLQTCLATGDLPL 183
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL IRTGGE R+S+FLLWQ+AY+E F +WPDF + AL + R RRFG S+
Sbjct: 184 PDLCIRTGGEHRISNFLLWQLAYAELYFSDLFWPDFKHDAMRAALADFASRQRRFGKTSE 243
Query: 242 K 242
+
Sbjct: 244 Q 244
>gi|33240553|ref|NP_875495.1| undecaprenyl pyrophosphate synthase [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|42559768|sp|Q7VBI9|UPPS_PROMA RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|33238081|gb|AAQ00148.1| Undecaprenyl pyrophosphate synthase [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 266
Score = 286 bits (731), Expect = 3e-75, Method: Composition-based stats.
Identities = 91/239 (38%), Positives = 130/239 (54%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ AS+ P+HI IIMDGNGRWA A+ LPR GH G++ + + + GI LT+
Sbjct: 18 LPASIDPLRLPEHIAIIMDGNGRWANAKKLPRAMGHSAGVDALKQTLRLCNDWGIGVLTV 77
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP E++ L+ L + LKK +L +++ +G+ L + ++ EA
Sbjct: 78 YAFSTENWSRPKEEVNFLMTLFERVLKKELEALNLEEVQISFLGDLDQLPTRLQDLINEA 137
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ T N G+ + NY R E+ A + + Q + G + +D A L TS
Sbjct: 138 TELTSGNNGIRFNVCTNYGGRRELVLAAQKLAQRVLQGDLDPSFIDEHTFAGELLTSSYA 197
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRT GE R+S+FLLWQ+AY+E WPDF AL Y R RRFGG+
Sbjct: 198 DPDLLIRTSGEMRISNFLLWQLAYAEIHVTDTLWPDFDSISLTKALIDYQSRRRRFGGV 256
>gi|313896302|ref|ZP_07829855.1| di-trans,poly-cis-decaprenylcistransferase [Selenomonas sp. oral
taxon 137 str. F0430]
gi|312975101|gb|EFR40563.1| di-trans,poly-cis-decaprenylcistransferase [Selenomonas sp. oral
taxon 137 str. F0430]
Length = 262
Score = 286 bits (731), Expect = 3e-75, Method: Composition-based stats.
Identities = 100/241 (41%), Positives = 148/241 (61%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ ++ + P H+ I+MDGNGRWA A+GL R AGH G+ IV AA+++GI+ LT++
Sbjct: 21 ICAVRCENMPHHLAIVMDGNGRWAKAQGLSRSAGHEAGVRTLKRIVRAASDMGIEVLTVY 80
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E+ L++L SFL+K + + N+++ IG R D ++EAE
Sbjct: 81 AFSTENWKRPPIEVDFLMRLFDSFLQKEIEEMHRENVRIHFIGRRDRFGDRFRRRMQEAE 140
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ NTGL +A NY +DEI RA ++ + + SG + D+D ++ + LDT+ P
Sbjct: 141 NLMANNTGLRFNVAVNYGGQDEILRAAHSLAERVASGQLTPKDIDETVFSNELDTAGDPP 200
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL IRT G+ RLS+FLLWQ AY+EF F WPDF+ + A+ + R RRFGGL+
Sbjct: 201 VDLFIRTSGDLRLSNFLLWQSAYAEFYFTDTLWPDFTPDHLAAAVEDFAGRTRRFGGLTA 260
Query: 242 K 242
+
Sbjct: 261 E 261
>gi|315651640|ref|ZP_07904651.1| di-trans,poly-cis-decaprenylcistransferase [Eubacterium saburreum
DSM 3986]
gi|315486094|gb|EFU76465.1| di-trans,poly-cis-decaprenylcistransferase [Eubacterium saburreum
DSM 3986]
Length = 235
Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats.
Identities = 102/229 (44%), Positives = 144/229 (62%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P I II+DGNGRWA R LPR GH+ G E + V +G++ LT++AFS NW+
Sbjct: 6 IPKSIAIILDGNGRWAKKRNLPRAMGHKAGCETLEKTVEDCVRLGVECLTVYAFSTENWK 65
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ L+KL++ ++ K +NN+K +IG+ + DI +++ + T+ NTG
Sbjct: 66 RSAIEVGALMKLLRFYMVKLIDVANRNNVKAVMIGDESRFEPDIRNGIRKLTEATKNNTG 125
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ A NY RDEI RA++NI D+ESG + ++ LI+ YLDT+D+PDPDL+IRT
Sbjct: 126 MVFAFAINYGGRDEIKRAVENIVDDVESGKLSKENISEELISSYLDTNDLPDPDLLIRTS 185
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GE R+S+FLLWQ+AYSEF WPDF +E A+ Y+ R RRFGG
Sbjct: 186 GELRVSNFLLWQIAYSEFYITDTLWPDFDKEELLKAIESYSHRQRRFGG 234
>gi|315121992|ref|YP_004062481.1| undecaprenyl diphosphate synthase [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495394|gb|ADR51993.1| undecaprenyl diphosphate synthase [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 243
Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats.
Identities = 187/233 (80%), Positives = 208/233 (89%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
PDHI IIMDGNGRWA RGLPR AGHRKGIEVF+EIV A E+G+KNLTIFAFSI+NWR
Sbjct: 6 VPDHIAIIMDGNGRWARERGLPRYAGHRKGIEVFSEIVVVATEIGVKNLTIFAFSIDNWR 65
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP SEI+++VKLI SF+ KGF LKKNN+KVRVIGNRLSLDDDIL +LKE E++T+ NTG
Sbjct: 66 RPNSEITQIVKLINSFINKGFDVLKKNNVKVRVIGNRLSLDDDILLLLKEIEEKTQFNTG 125
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L LFIAFNYSSRDEISRA K I +DIESG +CSHD+ SSLIA+YLDTSD+PDPDLIIRTG
Sbjct: 126 LKLFIAFNYSSRDEISRAFKGILKDIESGFLCSHDMSSSLIARYLDTSDIPDPDLIIRTG 185
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GEKRLSDFLLWQ AYSEFVFIPEYWPDFSRELF +A++QY LRDRRFGGLSKK
Sbjct: 186 GEKRLSDFLLWQAAYSEFVFIPEYWPDFSRELFLYAVDQYALRDRRFGGLSKK 238
>gi|118580464|ref|YP_901714.1| undecaprenyl pyrophosphate synthase [Pelobacter propionicus DSM
2379]
gi|118503174|gb|ABK99656.1| Undecaprenyl pyrophosphate synthetase [Pelobacter propionicus DSM
2379]
Length = 251
Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats.
Identities = 103/241 (42%), Positives = 142/241 (58%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + P H+ IIMDGNGRWA R L R GH++G E N +V A +GI+ LT+F
Sbjct: 1 MRELDPERLPVHLAIIMDGNGRWAQQRMLKRIVGHQRGAETVNMVVEHAWRLGIQYLTLF 60
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+ L+ L+K +++K + + NI+ VIGNR L D+ L EA
Sbjct: 61 AFSSENWSRPAIEVRALMSLLKKYIRKETARMMRKNIRYNVIGNRSDLPVDVNETLDEAI 120
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
QT +NTG+ L +A +Y R E+S A + + D+ G + D+ YLDT +PD
Sbjct: 121 KQTSVNTGMTLTLALSYGGRQELSMAARRLACDVRDGKITPDDISVENFGTYLDTGGLPD 180
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PD +IRT GE R+S+FLLWQ+AY+E F WPDF+ F AL + R+RRFG S
Sbjct: 181 PDFLIRTSGEMRISNFLLWQLAYTELYFTETNWPDFTINEFNKALIDFQSRERRFGKTSD 240
Query: 242 K 242
+
Sbjct: 241 Q 241
>gi|113953314|ref|YP_730243.1| undecaprenyl pyrophosphate synthase [Synechococcus sp. CC9311]
gi|113880665|gb|ABI45623.1| undecaprenyl diphosphate synthase [Synechococcus sp. CC9311]
Length = 257
Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats.
Identities = 91/237 (38%), Positives = 138/237 (58%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A ++ P H+ +IMDGNGRWA +RGLPR GHR G+E + ++ G+K LT +A
Sbjct: 19 AELIPQRLPAHVAVIMDGNGRWAQSRGLPRVMGHRAGVEALKATLRRCSDWGVKALTAYA 78
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RP E++ L+ L + L++ +L+ +++R +G+ L + +++E+
Sbjct: 79 FSTENWSRPGDEVNFLMTLFERVLERELQALEAERVRIRFLGDLEPLPSRLQSLIEESTK 138
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
+T N G++ + NY R E+ A + + + SG + ++D +A L T+D DP
Sbjct: 139 RTASNDGIHFNVCTNYGGRHELVVAARRLAERAASGELDPSEIDERTLAGELFTADESDP 198
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DL+IRT GE R+S+FLLWQ+AY+E WPDF RE A Y R RRFGGL
Sbjct: 199 DLLIRTSGEHRISNFLLWQLAYAEIHVTDVLWPDFDREALVGAFLDYQSRTRRFGGL 255
>gi|153839720|ref|ZP_01992387.1| undecaprenyl diphosphate synthase [Vibrio parahaemolyticus AQ3810]
gi|149746756|gb|EDM57744.1| undecaprenyl diphosphate synthase [Vibrio parahaemolyticus AQ3810]
Length = 251
Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats.
Identities = 99/236 (41%), Positives = 150/236 (63%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S S P HI IIMDGNGRWA ++G PR GH+KG+ + VAAA+++GIK +T+FAFS
Sbjct: 8 SDSLPKHIAIIMDGNGRWAKSKGKPRVFGHKKGVNAVRKTVAAASKLGIKAMTLFAFSSE 67
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+ L++L + L L KNN+++RVIG+ + + + EAE+ T
Sbjct: 68 NWRRPEEEVGLLMELFITVLSSEVKKLHKNNLQLRVIGDTSRFSERLQKKIVEAENLTAS 127
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTG+ + IA NY + +I+ A K + +G + D++ LI ++L +D+P+ DL+I
Sbjct: 128 NTGMVINIAANYGGKWDITEAAKALALKARNGEIRVEDINEQLITEHLTMADLPEVDLLI 187
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE R+S+F+LWQ+AY+E PE+WP+F + A+ + R+RRFG ++
Sbjct: 188 RTSGECRISNFMLWQMAYAEMYLTPEFWPEFDEDSLVEAVTWFINRERRFGCTGEQ 243
>gi|118586855|ref|ZP_01544289.1| undecaprenyl pyrophosphate synthetase [Oenococcus oeni ATCC
BAA-1163]
gi|118432687|gb|EAV39419.1| undecaprenyl pyrophosphate synthetase [Oenococcus oeni ATCC
BAA-1163]
Length = 254
Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats.
Identities = 104/235 (44%), Positives = 137/235 (58%), Gaps = 3/235 (1%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P+H+ IIMDGNGRWA + PR GH+ G++ I AA +G+K LT+FAFS NW
Sbjct: 19 LPEHVAIIMDGNGRWAKRQHKPRIFGHKAGMQNVKTIALAANNLGVKVLTLFAFSTENWG 78
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E++ L+KL F L +NNIKV IG L + A + T+ NTG
Sbjct: 79 RPQDEVNYLMKLPIDFFNTFVPELIENNIKVEGIGEIDDLPEKTRQAFLNAVEDTKDNTG 138
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD---PDLII 186
L L A NY R EI A K+I + G + + D+D L L T+ + + PDLII
Sbjct: 139 LILNFAINYGGRTEIVDATKSIVNQVLQGKIKTEDIDEKLFQNNLLTNTLAEKANPDLII 198
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
RT GE+R+S+FLLWQ AYSEF F P+ WPD++ E AL Y+ RDRRFG + +
Sbjct: 199 RTSGEQRISNFLLWQSAYSEFYFSPKLWPDYTAEDLEEALAAYSNRDRRFGKIRE 253
>gi|330964145|gb|EGH64405.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 251
Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats.
Identities = 94/236 (39%), Positives = 145/236 (61%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
SS P H+ IIMDGN RWA R LP AGH+ G++ ++ AE ++ LT+FAFS
Sbjct: 9 PSSVPRHVAIIMDGNNRWARKRLLPGVAGHKAGVDAVRAVIEVCAEAKVEVLTLFAFSSE 68
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW+RP E+ L++L + L++ L +N+I +R+IG+R ++ ++EAE +T
Sbjct: 69 NWQRPAEEVGALMELFFTALRRETKRLNENDISLRIIGDRSRFHPELQAAMREAEVRTSG 128
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N+ L IA NY + +I++A + + +++++G + D+ L+ L T D+P PDL I
Sbjct: 129 NSRFVLQIAANYGGQWDIAQAAQRLAREVQAGHLQPEDITPELLQTCLATGDLPLPDLCI 188
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE R+S+FLLWQ+AY+E F +WPDF + AL + R RRFG S++
Sbjct: 189 RTGGEHRISNFLLWQLAYAELYFSDLFWPDFKHDAMRAALADFASRQRRFGKTSEQ 244
>gi|237740223|ref|ZP_04570704.1| undecaprenyl pyrophosphate synthetase [Fusobacterium sp. 2_1_31]
gi|229422240|gb|EEO37287.1| undecaprenyl pyrophosphate synthetase [Fusobacterium sp. 2_1_31]
Length = 230
Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats.
Identities = 100/235 (42%), Positives = 142/235 (60%), Gaps = 7/235 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M + P HI IIMDGNGRWA RGL R GH +G + + E+G+K LT++AFS
Sbjct: 1 MEKNIPQHIAIIMDGNGRWAKKRGLARSFGHMEGAKSLRRALEYFTEIGVKYLTVYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+S L+KL ++K ++ KN I+ V G + ++ + +L +++ +++T+
Sbjct: 61 ENWSRPKDEVSTLMKLFLKYIKSERKNMMKNKIRFFVSGRKNNIPEKLLNEIEKLKEETK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N + L IAFNY SR EI A+ NI +D + ++ +KYL +D PDPDL+
Sbjct: 121 NNDKITLNIAFNYGSRAEIIDAVNNIIKDGK------ENITEEDFSKYLY-NDFPDPDLL 173
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IRT GE R+S+FLLWQ+AYSE WPDF + A+ YN RDRRFGG+
Sbjct: 174 IRTSGEMRISNFLLWQIAYSELYITDTLWPDFDEKEIDKAIESYNQRDRRFGGVK 228
>gi|282861796|ref|ZP_06270860.1| undecaprenyl diphosphate synthase [Streptomyces sp. ACTE]
gi|282563612|gb|EFB69150.1| undecaprenyl diphosphate synthase [Streptomyces sp. ACTE]
Length = 270
Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats.
Identities = 86/238 (36%), Positives = 138/238 (57%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P H+ ++MDGNGRWA RGLPR GH+ G V +++ E+G+KNL+++AF
Sbjct: 29 KIPGELVPKHVAVVMDGNGRWAKERGLPRTEGHKVGEGVVMDVLKGCIEMGVKNLSLYAF 88
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + +++ + + I++R +G L ++ L+ A++Q
Sbjct: 89 STENWKRSPDEVKFLMNFNRDVIRRRRDEMDELGIRIRWVGRMPKLWKSVVQELQVAQEQ 148
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N + L+ NY R EI+ A + I +D+ +G + V+ AKY+ D+PD D
Sbjct: 149 TKDNDRMTLYFCVNYGGRAEIADAAQRIAEDVAAGRLDPSKVNEKTFAKYIYYPDMPDVD 208
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
L +R GE+R S++L+WQ AY+E VF WPDF R + A ++ RDRRFGG +
Sbjct: 209 LFVRPSGEQRTSNYLIWQSAYAEMVFQDVLWPDFDRRDLWRACLEFAQRDRRFGGAEE 266
>gi|225849934|ref|YP_002730168.1| di-trans, poly-cis-decaprenylcistransferase [Persephonella marina
EX-H1]
gi|225645945|gb|ACO04131.1| di-trans, poly-cis-decaprenylcistransferase [Persephonella marina
EX-H1]
Length = 233
Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats.
Identities = 96/232 (41%), Positives = 140/232 (60%), Gaps = 6/232 (2%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P+H+ +IMDGNGRWA RGLPR GHR+G + + A +VGIK L++FAFS NW
Sbjct: 7 KIPEHVAVIMDGNGRWAKRRGLPRVFGHREGAKAVERTLKIANDVGIKWLSVFAFSTENW 66
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E++ ++ L+ ++ L K+NI++R +G R L + IL + E E T
Sbjct: 67 GRPKEEVNAIMSLLVEYINTKVPHLVKDNIRLRFMGRRDGLPEMILESMYEGEKATEKCD 126
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
G+N +A NYS + EI A+K I + ++D +YL ++P+PDL+IRT
Sbjct: 127 GMNFVVALNYSGKAEIVDAVKKIISSGKR------EIDEEEFREYLYIPEMPEPDLLIRT 180
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
GEKR+S+F+LW++AY+E F WPDF+ E F AL Y R+RRFG ++
Sbjct: 181 SGEKRISNFMLWELAYTELYFTEVLWPDFNEEEFLKALYFYQSRERRFGKVT 232
>gi|294789498|ref|ZP_06754734.1| di-trans,poly-cis-decaprenylcistransferase [Simonsiella muelleri
ATCC 29453]
gi|294482578|gb|EFG30269.1| di-trans,poly-cis-decaprenylcistransferase [Simonsiella muelleri
ATCC 29453]
Length = 250
Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats.
Identities = 90/242 (37%), Positives = 142/242 (58%), Gaps = 6/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M S + + P H+ +IMDGNGRWA R +PR GH++G++ E+ + G++ LT+
Sbjct: 7 MSHSANNQNIPRHVAVIMDGNGRWAKKRLMPRVMGHKRGLDTLEEMCRICSNAGVEYLTV 66
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NWRRP E+S L+ L + L+K + N ++V+VIG+R I + A
Sbjct: 67 FAFSTENWRRPEDEVSFLMGLFLTALEKKVAKMHANGLRVKVIGDRSHFSPAIQKGIVAA 126
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E+ T+ N GL L +A +Y + +I +A + + ++ + S ++ L ++ P
Sbjct: 127 EELTKNNPGLTLTVAADYGGKWDIIQAANALIAEGKT------QITESDLSTKLMLAEAP 180
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
+PDL IRTGGE R+S+F+LWQ+AY+EF F WPDF+ + A + R+RRFG S
Sbjct: 181 EPDLFIRTGGETRISNFMLWQMAYAEFYFTDVLWPDFNETEIYRAFESFTQRERRFGRTS 240
Query: 241 KK 242
++
Sbjct: 241 EQ 242
>gi|28868744|ref|NP_791363.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213969122|ref|ZP_03397261.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv. tomato
T1]
gi|301383983|ref|ZP_07232401.1| undecaprenyl pyrophosphate synthetase [Pseudomonas syringae pv.
tomato Max13]
gi|302064131|ref|ZP_07255672.1| undecaprenyl pyrophosphate synthetase [Pseudomonas syringae pv.
tomato K40]
gi|302134058|ref|ZP_07260048.1| undecaprenyl pyrophosphate synthetase [Pseudomonas syringae pv.
tomato NCPPB 1108]
gi|42559802|sp|Q886N9|UPPS_PSESM RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|28851983|gb|AAO55058.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213926120|gb|EEB59676.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv. tomato
T1]
gi|331016371|gb|EGH96427.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 251
Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats.
Identities = 95/241 (39%), Positives = 147/241 (60%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ S SS P H+ IIMDGN RWA R LP AGH+ G++ ++ AE ++ LT+F
Sbjct: 4 IKSAGPSSVPRHVAIIMDGNNRWARKRLLPGVAGHKAGVDAVRAVIEVCAEAKVEVLTLF 63
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E+ L++L + L++ L +N+I +R+IG+R ++ ++EAE
Sbjct: 64 AFSSENWQRPAEEVGALMELFFTALRRETKRLNENDISLRIIGDRSRFHPELQAAMREAE 123
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T N+ L IA NY + +I++A + + +++++G + D+ L+ L T D+P
Sbjct: 124 VRTSGNSRFVLQIAANYGGQWDIAQAAQRLAREVQAGHLQPEDITPQLLQTCLATGDLPL 183
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL IRTGGE R+S+FLLWQ+AY+E F +WPDF + AL + R RRFG S+
Sbjct: 184 PDLCIRTGGEHRISNFLLWQLAYAELYFSDLFWPDFKHDAMRAALADFASRQRRFGKTSE 243
Query: 242 K 242
+
Sbjct: 244 Q 244
>gi|262068168|ref|ZP_06027780.1| di-trans,poly-cis-decaprenylcistransferase [Fusobacterium
periodonticum ATCC 33693]
gi|291378111|gb|EFE85629.1| di-trans,poly-cis-decaprenylcistransferase [Fusobacterium
periodonticum ATCC 33693]
Length = 230
Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats.
Identities = 98/235 (41%), Positives = 142/235 (60%), Gaps = 7/235 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M + P H+ IIMDGNGRWA RGL R GH +G + + E+G+K LT++AFS
Sbjct: 1 MEKNIPQHVAIIMDGNGRWAKKRGLARSFGHMEGAKSLRRALEYFTEIGVKYLTVYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+S L+KL ++K ++ KN I+ V G + ++ + +L +++ +++T+
Sbjct: 61 ENWSRPKDEVSTLMKLFLKYIKSERKNMMKNKIRFFVSGRKNNIPEKLLNEIEKLKEETK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N + L IAFNY SR EI A+ +I +D + ++ +KYL +D PDPDL+
Sbjct: 121 DNDKITLNIAFNYGSRAEIIDAVNDIIKDGK------ENITEEDFSKYLY-NDFPDPDLL 173
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IRT GE R+S+FLLWQ+AYSE WPDF + A+ YN RDRRFGG+
Sbjct: 174 IRTSGEMRISNFLLWQIAYSELYITDTLWPDFDEKEIDKAIETYNQRDRRFGGVK 228
>gi|325571086|ref|ZP_08146658.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus
casseliflavus ATCC 12755]
gi|325156171|gb|EGC68357.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus
casseliflavus ATCC 12755]
Length = 266
Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 100/238 (42%), Positives = 144/238 (60%), Gaps = 4/238 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HI IIMDGNGRWA R LPR AGH++G+E +I A+ +G+K LT++AFS NW
Sbjct: 25 PIPQHIAIIMDGNGRWAQNRRLPRVAGHKEGMETVKKITKHASHLGVKVLTLYAFSTENW 84
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP E+ L++L F L K N++V+V+G SL +K A DQT+ NT
Sbjct: 85 KRPNEEVDFLMQLPVDFFDTFVPELIKENVQVKVMGFTDSLPLHTQEAVKRAIDQTKDNT 144
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDL 184
G+ L A NY SR EI A++ +++++ + ++ ++ +L T +P DP+L
Sbjct: 145 GMILNFALNYGSRAEILTAVQALYEELSASGEALPELTEDMLGTHLMTGFLPSPLRDPEL 204
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IRT GE+R+S+FLLWQ+AYSE F WPDF L A+ + R+RRFGGL +
Sbjct: 205 VIRTSGEERVSNFLLWQIAYSELFFTKALWPDFDAALLEDAIGSFQQRNRRFGGLKTE 262
>gi|294782681|ref|ZP_06748007.1| di-trans,poly-cis-decaprenylcistransferase [Fusobacterium sp.
1_1_41FAA]
gi|294481322|gb|EFG29097.1| di-trans,poly-cis-decaprenylcistransferase [Fusobacterium sp.
1_1_41FAA]
Length = 230
Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 99/235 (42%), Positives = 143/235 (60%), Gaps = 7/235 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M + P HI IIMDGNGRWA RGL R GH +G + + E+G+K LT++AFS
Sbjct: 1 MEKNIPQHIAIIMDGNGRWAKKRGLARSFGHMEGAKSLRRALEYFTEIGVKYLTVYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+S L+KL ++K ++ KN I+ V G + ++ + +L +++ +++T+
Sbjct: 61 ENWSRPKDEVSTLMKLFLKYIKSERKNMMKNKIRFFVSGRKNNIPEKLLNEIEKLKEETK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N + L IAFNY SR EI A+ +I +D + +++ +KYL +D PDPDL+
Sbjct: 121 NNDKITLNIAFNYGSRAEIIDAVNDIIKDGK------ENINEEDFSKYLY-NDFPDPDLL 173
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IRT GE R+S+FLLWQ+AYSE WPDF + A+ YN RDRRFGG+
Sbjct: 174 IRTSGEMRISNFLLWQIAYSELYITDTLWPDFDEKEIDKAIESYNQRDRRFGGVK 228
>gi|119487024|ref|ZP_01620896.1| undecaprenyl pyrophosphate synthetase [Lyngbya sp. PCC 8106]
gi|119455953|gb|EAW37087.1| undecaprenyl pyrophosphate synthetase [Lyngbya sp. PCC 8106]
Length = 249
Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 92/239 (38%), Positives = 139/239 (58%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ A + + P HI +IMDGNGRWA RG PR GHR+G+E E++ + GI+ LT
Sbjct: 11 LPADLDPNRLPKHIAVIMDGNGRWAKRRGWPRTMGHRQGVETLKELLRCCRDWGIEALTA 70
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP+ E+ L+ L + L + + + ++++ +GN +L + ++E+
Sbjct: 71 YAFSTENWGRPLEEVDFLMALFERVLMRELREMMEEEVRIQFVGNLNALPTSLQAKIEES 130
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ TR N G+ +A NY R EI RA + I ++ G + +++ L K+L T+ +
Sbjct: 131 KQSTRNNHGILFNVATNYGGRQEIIRACQEIASQVQQGQLNPDEINEVLFEKHLYTAGLS 190
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDL+IRT GE R+S+FLLWQ+AY+E WPDF F AL Y RDRRFG +
Sbjct: 191 HPDLLIRTSGEMRISNFLLWQMAYAEIYVTDTLWPDFDSSEFHLALCSYQKRDRRFGKI 249
>gi|326692546|ref|ZP_08229551.1| undecaprenyl diphosphate synthase [Leuconostoc argentinum KCTC
3773]
Length = 259
Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 96/236 (40%), Positives = 135/236 (57%), Gaps = 3/236 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
PDHI IIMDGNGRWA R +PR AGH+ G I AA+++G+K LT++AFS NW
Sbjct: 18 KIPDHIAIIMDGNGRWAKKRMMPRIAGHKTGTNTVKRIATAASDLGVKVLTLYAFSTENW 77
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E++ L++L F L KNNI+V V+GN L + ++ A QT T
Sbjct: 78 SRPNDEVNFLMQLPIDFFNDFVPDLIKNNIRVEVMGNIAQLPEGTQRAVQNAITQTAGGT 137
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS---DVPDPDLI 185
G+ L A NY + EI A K + Q + +G + D+ + L T+ + PDL+
Sbjct: 138 GMVLNFALNYGGQIEIVEAAKQLAQQVSAGDLDPADITPENFSAALQTAALGALAAPDLL 197
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
IRT GE RLS+F+ +Q AY+E F WPD++ + A+ + RDRRFGGL++
Sbjct: 198 IRTSGELRLSNFMPYQAAYAELYFTDVLWPDYTADDLLAAIASFTQRDRRFGGLNE 253
>gi|254511763|ref|ZP_05123830.1| undecaprenyl pyrophosphate synthetase 1 [Rhodobacteraceae bacterium
KLH11]
gi|221535474|gb|EEE38462.1| undecaprenyl pyrophosphate synthetase 1 [Rhodobacteraceae bacterium
KLH11]
Length = 243
Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 106/231 (45%), Positives = 143/231 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA ARG PR GH G E+V A +GIK LTIFAFS NW+R
Sbjct: 13 PRHVAIIMDGNGRWAQARGRPRLFGHHAGARRVREVVEACPRLGIKYLTIFAFSTENWKR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E++ L+ L + ++ K +LK+N I+VR IG+R+ LD + ++ E +T N +
Sbjct: 73 TQVEVAGLMSLFRRYITKETKTLKENGIRVRFIGDRVRLDAKLTELMDTLEHETEQNDLV 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L +A NY RDE++RA K + +D+ G + DVD + KYLDT +PDPDL+IRT G
Sbjct: 133 HLTVALNYGGRDEVARATKRLARDVAKGVLRPEDVDEETLPKYLDTRVLPDPDLVIRTSG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E R+S+FLLWQ AYSE+ F WPDF+ Y R+RRFG +
Sbjct: 193 EARISNFLLWQSAYSEYEFSDTLWPDFTAAELERLCRSYGARERRFGAVPA 243
>gi|134094564|ref|YP_001099639.1| undecaprenyl pyrophosphate synthetase [Herminiimonas
arsenicoxydans]
gi|133738467|emb|CAL61512.1| Undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans,poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS) [Herminiimonas
arsenicoxydans]
Length = 254
Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 94/233 (40%), Positives = 136/233 (58%), Gaps = 4/233 (1%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI IIMDGNGRWA R +PR AGH KG+E IV A A+ G++ +T FAFS NWR
Sbjct: 16 VPRHIAIIMDGNGRWATKRFMPRVAGHVKGVEAVRGIVEACAKQGVEYVTFFAFSSENWR 75
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+S L++L + L++ + N I+++++G+ DD + ++ AE +T N
Sbjct: 76 RPDDEVSLLMRLFMTALEREVSKMHANGIRLKIVGDLSRFDDKLQKMIASAERKTAANDR 135
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L + I NY R +I +A+ + + D + +L + P+PDL IRTG
Sbjct: 136 LTVTICANYGGRWDIMQAVNKMAAAY----PDAGDFSEEQLTPFLSLAYAPEPDLFIRTG 191
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+R+S+FLLWQ+AY+E F YWPDF A++ Y R+RRFG S +
Sbjct: 192 GEERISNFLLWQLAYTELYFTDTYWPDFDAAALELAISSYQQRERRFGRTSAQ 244
>gi|260588562|ref|ZP_05854475.1| di-trans,poly-cis-decaprenylcistransferase [Blautia hansenii DSM
20583]
gi|331082135|ref|ZP_08331263.1| di-trans,poly-cis-decaprenylcistransferase [Lachnospiraceae
bacterium 6_1_63FAA]
gi|260541037|gb|EEX21606.1| di-trans,poly-cis-decaprenylcistransferase [Blautia hansenii DSM
20583]
gi|330405730|gb|EGG85260.1| di-trans,poly-cis-decaprenylcistransferase [Lachnospiraceae
bacterium 6_1_63FAA]
Length = 235
Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 103/233 (44%), Positives = 154/233 (66%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ II+DGNGRWA A+G+PR GH KG E +I A ++G+K LT++AFS NW+
Sbjct: 3 IPRHVAIILDGNGRWAKAKGMPRTYGHIKGCENLEKICGIAKDLGVKYLTVYAFSTENWK 62
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ L+KL ++++K+ + N + VRVIG+ D D+ +KE E+ +
Sbjct: 63 RSKEEVDGLMKLFRNYMKRCIQISRDNKMCVRVIGDPSMFDADLQQKIKELEEYSSQFDE 122
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L+ IA NY SRDEI RA+ + +D+E G + + +I+ YLDT +PDPDL+IRT
Sbjct: 123 LHFQIALNYGSRDEIKRAMVRMAEDVEKGVLLPQQITEDVISDYLDTRALPDPDLLIRTS 182
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+RLS+FL+WQ+AY+EF F WPDF ++ F A++++N RDRR+GG+ ++
Sbjct: 183 GEERLSNFLMWQLAYTEFYFTDVAWPDFDKKEFEKAIDKFNHRDRRYGGVKEE 235
>gi|330504240|ref|YP_004381109.1| undecaprenyl pyrophosphate synthetase [Pseudomonas mendocina NK-01]
gi|328918526|gb|AEB59357.1| undecaprenyl pyrophosphate synthetase [Pseudomonas mendocina NK-01]
Length = 248
Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 95/237 (40%), Positives = 141/237 (59%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ P H+ IIMDGN RWA R LP AGH+ G++ ++ AE G++ LT+FAFS
Sbjct: 5 KQGAVPRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAESGVEVLTLFAFSS 64
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP E+ L++L L++ L N+I +R+IG+R ++ ++EAE T
Sbjct: 65 ENWQRPAEEVGALMELFLGALRREAKRLLDNDISLRIIGDRSRFHPELQAAMREAELMTA 124
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
+ L IA NY + +I++A + + +++++G + D+ L+ L T D+P PDL
Sbjct: 125 GSRRFTLQIAANYGGQWDIAQAAQRLAREVQAGHLQPEDITPHLLQGCLATGDLPLPDLC 184
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTGGE R+S+FLLWQ+AYSE F YWPDF E AL + R RRFG S++
Sbjct: 185 IRTGGEHRISNFLLWQLAYSELYFSDLYWPDFKHEAMRKALADFATRQRRFGKTSEQ 241
>gi|293400529|ref|ZP_06644674.1| di-trans, poly-cis-decaprenylcistransferase [Erysipelotrichaceae
bacterium 5_2_54FAA]
gi|291305555|gb|EFE46799.1| di-trans, poly-cis-decaprenylcistransferase [Erysipelotrichaceae
bacterium 5_2_54FAA]
Length = 234
Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 107/235 (45%), Positives = 145/235 (61%), Gaps = 1/235 (0%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M P HI IIMDGNGRWA RGLPR AGH++G E +I A E+G+K LT +AFS
Sbjct: 1 MEGRIIPQHIAIIMDGNGRWAKKRGLPRTAGHKQGAENIRKIAIACNELGVKALTCYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP SE+ L KL K F ++ LKKNNI+V +G ++ V+ A +QT
Sbjct: 61 TENWKRPESEVEYLCKLPKLFFQRYLAELKKNNIRVTFLGEIERFPNETRSVITTAVEQT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NTGL L +A NY R EI+ A + D+ G + +D Y+ + +P+ DL
Sbjct: 121 KDNTGLILCLAVNYGGRREITLAAQRYAADVVRGIADA-AIDEEAFGHYMMSEGMPELDL 179
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE R+S+FLLWQ+AY+E +F P WPDF R+ A+++Y R+RRFGGL
Sbjct: 180 MIRTSGELRISNFLLWQLAYAELIFTPVAWPDFDRDCLVEAIDEYTHRNRRFGGL 234
>gi|294635125|ref|ZP_06713636.1| di-trans,poly-cis-decaprenylcistransferase [Edwardsiella tarda ATCC
23685]
gi|291091502|gb|EFE24063.1| di-trans,poly-cis-decaprenylcistransferase [Edwardsiella tarda ATCC
23685]
Length = 245
Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 92/234 (39%), Positives = 136/234 (58%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
++S P H+ IIMDGNGRWA +G R GH+ G++ V A GI+ LT++AFS
Sbjct: 4 AASVPRHVAIIMDGNGRWAKRQGKMRVFGHKAGVKSVRCAVRFAVARGIRALTLYAFSSE 63
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP E+S L++L L L K+ +++RVIG+ + ++ +E T
Sbjct: 64 NWNRPQQEVSALMELFVRALDSEVKRLHKHQVRLRVIGDISRFSPRLQERIRRSEQMTAA 123
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N GL L IA NY R +I + +K + + ++ G++ + +++ + + D DL+I
Sbjct: 124 NEGLTLNIAANYGGRWDIVQGVKVLAERVQQGTLAPEAISEAMLGEQVCLHDQDAVDLVI 183
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RTGGE R+S+FLLWQ+AYSEF F WPDF F ALN + R+RRFGG +
Sbjct: 184 RTGGEHRVSNFLLWQIAYSEFYFTDVLWPDFDETTFEGALNAFAQRERRFGGTT 237
>gi|15598848|ref|NP_252342.1| undecaprenyl pyrophosphate synthetase [Pseudomonas aeruginosa PAO1]
gi|152987147|ref|YP_001346871.1| undecaprenyl pyrophosphate synthetase [Pseudomonas aeruginosa PA7]
gi|218890123|ref|YP_002438987.1| undecaprenyl pyrophosphate synthetase [Pseudomonas aeruginosa
LESB58]
gi|254236566|ref|ZP_04929889.1| undecaprenyl pyrophosphate synthetase [Pseudomonas aeruginosa
C3719]
gi|254242349|ref|ZP_04935671.1| undecaprenyl pyrophosphate synthetase [Pseudomonas aeruginosa 2192]
gi|42559882|sp|Q9HXY2|UPPS_PSEAE RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|9949813|gb|AAG07040.1|AE004785_4 undecaprenyl pyrophosphate synthetase [Pseudomonas aeruginosa PAO1]
gi|126168497|gb|EAZ54008.1| undecaprenyl pyrophosphate synthetase [Pseudomonas aeruginosa
C3719]
gi|126195727|gb|EAZ59790.1| undecaprenyl pyrophosphate synthetase [Pseudomonas aeruginosa 2192]
gi|150962305|gb|ABR84330.1| di-trans,poly-cis-decaprenylcistransferase [Pseudomonas aeruginosa
PA7]
gi|218770346|emb|CAW26111.1| undecaprenyl pyrophosphate synthetase [Pseudomonas aeruginosa
LESB58]
Length = 251
Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 94/233 (40%), Positives = 142/233 (60%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IIMDGN RWA R LP AGH+ G++ ++ AE G++ LT+FAFS NW+
Sbjct: 10 VPRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAEAGVEVLTLFAFSSENWQ 69
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+S L++L L++ L +N I++R+IG+R ++ ++EAE T NT
Sbjct: 70 RPADEVSALMELFLVALRREVRKLDENGIRLRIIGDRTRFHPELQAAMREAEAATAGNTR 129
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L +A NY + +I +A + + ++++ G + + D+ + L+ L T D P PDL IRTG
Sbjct: 130 FLLQVAANYGGQWDIVQAAQRLAREVQGGHLAADDISAELLQGCLVTGDQPLPDLCIRTG 189
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE R+S+FLLWQ+AY+E F +WPDF AL ++ R RRFG S++
Sbjct: 190 GEHRISNFLLWQLAYAELYFSDLFWPDFKHAAMRAALADFSKRQRRFGKTSEQ 242
>gi|330998728|ref|ZP_08322457.1| di-trans,poly-cis-decaprenylcistransferase [Parasutterella
excrementihominis YIT 11859]
gi|329576467|gb|EGG57979.1| di-trans,poly-cis-decaprenylcistransferase [Parasutterella
excrementihominis YIT 11859]
Length = 248
Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 96/241 (39%), Positives = 140/241 (58%), Gaps = 6/241 (2%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + P H+ I+MDGNGRWA AR LPR GH+KG+E + AA+ G+++LT+F
Sbjct: 6 LTAKPRERVPRHVAIVMDGNGRWAKARKLPRLMGHQKGVESVRTAIQTAAKAGVQHLTLF 65
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+ L+KL L++ +L K N++VR++G+ + +++ + ++
Sbjct: 66 AFSSENWNRPAEEVKGLMKLFLVSLRREIAALNKANVRVRLVGDLTAFSEELQQQIADSM 125
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T NTGL L + NY R EI A K S V ++ A L +D D
Sbjct: 126 KITENNTGLTLNVCVNYGGRWEILEAAKR------SREVPPEELTEQKFASLLPLADSGD 179
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL IRT GE+R+S+F+LWQ+AY E F WPDF+ F +ALN Y+ R+RRFG S+
Sbjct: 180 VDLFIRTSGEERISNFMLWQLAYGELYFTKILWPDFTENEFLNALNWYSNRERRFGKTSE 239
Query: 242 K 242
+
Sbjct: 240 Q 240
>gi|309379114|emb|CBX22245.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 248
Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 98/240 (40%), Positives = 144/240 (60%), Gaps = 6/240 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + ++ P HI +IMDGNGRWA R LPR GH++G++ +V A +G++ LT+FA
Sbjct: 7 AVLEHTAIPRHIAVIMDGNGRWAKKRFLPRIMGHKRGLDALENMVKHCAGLGVRYLTVFA 66
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP E+S L+ L L+K L +NN++++++G+R + IL ++EAE
Sbjct: 67 FSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNMRLKILGSRERFNRQILQGIEEAEA 126
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTGL L IA +Y R +I +A + + ++ +AK+L D P+P
Sbjct: 127 LTANNTGLTLSIAADYGGRWDILQAANKLIAEGV------SEITEDTLAKHLMLGDAPEP 180
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL IRTGGE R+S+FLLWQ+AY+E F WPDF A+ + R+RRFG S++
Sbjct: 181 DLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDETALNAAVASFQKRERRFGRTSEQ 240
>gi|148653597|ref|YP_001280690.1| undecaprenyl diphosphate synthase [Psychrobacter sp. PRwf-1]
gi|148572681|gb|ABQ94740.1| Undecaprenyl pyrophosphate synthetase [Psychrobacter sp. PRwf-1]
Length = 268
Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 87/237 (36%), Positives = 148/237 (62%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ + P HI IIMDGN R+A A G+ + GH G E + +V ++GI+ LT+FAFS
Sbjct: 18 VPAVLPKHIAIIMDGNNRYAKAHGMAKGQGHVAGKESLDPLVEYCVKIGIEVLTVFAFSS 77
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP SE++ L++L+ + + + ++K NI++R IG+R L +++ + +AE +T
Sbjct: 78 ENWQRPPSEVALLMRLLSATITEQMPRMQKYNIRLRFIGDRSQLSEELQAQMADAEAKTA 137
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
+ + L IA +Y + +I+ A + + Q + G++ + D+ + + + + +DVPD D++
Sbjct: 138 AHDAMTLVIAISYGGQWDIANAARQLAQQVAQGTLAAEDITVATLGQKVQLADVPDVDML 197
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTGGE R+S+FLLWQ AY+E F WPDF+ + L +++ R RRFG S++
Sbjct: 198 IRTGGEYRISNFLLWQSAYAELFFTDTLWPDFAAKELNSMLFEFSRRQRRFGKTSEQ 254
>gi|310816030|ref|YP_003963994.1| undecaprenyl diphosphate synthase [Ketogulonicigenium vulgare Y25]
gi|308754765|gb|ADO42694.1| undecaprenyl diphosphate synthase [Ketogulonicigenium vulgare Y25]
Length = 251
Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 100/233 (42%), Positives = 146/233 (62%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ P H+ IIMDGNGRWA RG PR GHR G +IV A ++G+K LTIFAFS
Sbjct: 17 AGVVPQHVAIIMDGNGRWAKLRGRPRLFGHRAGARRVRDIVQACPQLGVKYLTIFAFSTE 76
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW+R +E++ L+ + K ++ +L + VR IG+RL L+ + ++ + E T
Sbjct: 77 NWKRTQTEVAGLMGMFKRYIMNEAKTLHNAGVCVRFIGDRLRLEPSLQRLMNDLEALTAG 136
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N ++L IA NY RDE++RA++ + ++ G + DV S + +LDT +PDPDL+I
Sbjct: 137 NDTVHLTIAINYGGRDEVTRAVQRMAVEVADGRLHPQDVTSDTLTAFLDTHVLPDPDLVI 196
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE R+S+FLLWQ AY+E+ FI WPDF+ + F + ++ RDRRFGG+
Sbjct: 197 RTSGEARISNFLLWQSAYAEYEFIDTLWPDFTPDEFARVIGRFAARDRRFGGV 249
>gi|117618835|ref|YP_855718.1| undecaprenyl diphosphate synthase [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117560242|gb|ABK37190.1| undecaprenyl diphosphate synthase [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 258
Score = 285 bits (729), Expect = 5e-75, Method: Composition-based stats.
Identities = 94/236 (39%), Positives = 145/236 (61%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+SS P H+ IIMDGNGRWA RG R GH+ G++ E V AA I+ LT+FAFS
Sbjct: 12 NSSLPRHVAIIMDGNGRWAQNRGKMRVYGHKAGVKSVREAVTFAARAKIEALTLFAFSSE 71
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+S L++L + L + L N I+++VIG+ + + + +AE T
Sbjct: 72 NWRRPEGEVSALMELFMTVLGREVKKLHSNGIRLKVIGDTARFSERLQAKIAKAEALTAN 131
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N GL L IA NY + +I++A + + + + SG + + +D +++ + + +D+P DL+I
Sbjct: 132 NQGLTLNIAANYGGQWDIAQAARKLARAVASGELAADQIDEAMLGREVCMADLPPVDLLI 191
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGG+ R+S+F+LWQ+AY+E F P WPDF+ F A+ + R+RRFG ++
Sbjct: 192 RTGGDHRISNFVLWQLAYAELYFTPVLWPDFNEAEFSEAVASFVARERRFGCTGEQ 247
>gi|66044595|ref|YP_234436.1| di-trans-poly-cis-decaprenylcistransferase [Pseudomonas syringae
pv. syringae B728a]
gi|63255302|gb|AAY36398.1| Di-trans-poly-cis-decaprenylcistransferase [Pseudomonas syringae
pv. syringae B728a]
gi|330896061|gb|EGH28282.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv.
japonica str. M301072PT]
gi|330968957|gb|EGH69023.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv. aceris
str. M302273PT]
Length = 251
Score = 285 bits (729), Expect = 5e-75, Method: Composition-based stats.
Identities = 94/241 (39%), Positives = 146/241 (60%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + SS P H+ IIMDGN RWA R LP AGH+ G++ ++ AE ++ LT+F
Sbjct: 4 IKPAVPSSVPRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAEARVEVLTLF 63
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E+ L++L + L++ L +N I +R+IG+R ++ ++EAE
Sbjct: 64 AFSSENWQRPAEEVGALMELFFTALRRETKRLNENEISLRIIGDRSRFHPELQAAMREAE 123
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T N+ L IA NY + +I++A + + +++++G + D+ L+ L T D+P
Sbjct: 124 VRTSGNSRFVLQIAANYGGQWDIAQAAQRLAREVQAGHLQPEDITPQLLQTCLATGDLPL 183
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL IRTGGE R+S+FLLWQ+AY+E F +WPDF + AL + R RRFG S+
Sbjct: 184 PDLCIRTGGEHRISNFLLWQLAYAELYFSDLFWPDFKHDAMRAALADFASRQRRFGKTSE 243
Query: 242 K 242
+
Sbjct: 244 Q 244
>gi|304396649|ref|ZP_07378530.1| undecaprenyl diphosphate synthase [Pantoea sp. aB]
gi|304356158|gb|EFM20524.1| undecaprenyl diphosphate synthase [Pantoea sp. aB]
Length = 250
Score = 285 bits (729), Expect = 5e-75, Method: Composition-based stats.
Identities = 92/238 (38%), Positives = 137/238 (57%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ P H+ IIMDGNGRWA +G R +GH+ G++ V+ A ++ LT++AFS
Sbjct: 12 QQGNGPRHVAIIMDGNGRWAKNQGKLRISGHKAGVKSVRRAVSFAVNNNLEALTLYAFSS 71
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E++ L++L L SL K+N+++RVIG+ I ++ +E T
Sbjct: 72 ENWSRPAQEVTALMELFVWALDSEVKSLHKHNVRLRVIGDTSRFSPRIQERIRRSETLTA 131
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
NT L L IA NY R +I +K + + ++ G + + + L ++ DL+
Sbjct: 132 NNTRLTLNIAANYGGRWDIIEGVKKLAEQVQEGLLRPDQITEESLTSQLCMQELAPVDLV 191
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
IRTGGE R+S+FLLWQ+AY+EF F WPDF +F ALN ++LR+RRFGG + G
Sbjct: 192 IRTGGEHRISNFLLWQIAYAEFYFTDVLWPDFDEHVFEGALNAFSLRERRFGGAAPGG 249
>gi|270264815|ref|ZP_06193079.1| undecaprenyl pyrophosphate synthetase [Serratia odorifera 4Rx13]
gi|270041113|gb|EFA14213.1| undecaprenyl pyrophosphate synthetase [Serratia odorifera 4Rx13]
Length = 252
Score = 284 bits (728), Expect = 5e-75, Method: Composition-based stats.
Identities = 92/233 (39%), Positives = 137/233 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R GH+ G++ V+ AA + LT++AFS NW R
Sbjct: 16 PRHVAIIMDGNGRWAKRQGKLRVFGHKAGVKSVRRAVSFAANNHLDALTLYAFSSENWNR 75
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
PV E+S L++L L SL K+N+++RVIG+ + ++ +E T N GL
Sbjct: 76 PVQEVSALMELFVRALDSEVKSLHKHNVRLRVIGDISRFSTRLQERIRRSEQLTENNDGL 135
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I + ++ + + ++ G + + L+ + + +D+ DL+IRTGG
Sbjct: 136 TLNIAANYGGRWDIIQGVRELAEQVQGGLLRPDQISEELLGERVCMNDLAPVDLVIRTGG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
E R+S+FLLWQ+AY+E F WPDF +F ALN + R+RRFGG + G
Sbjct: 196 EHRISNFLLWQIAYAELYFTDVLWPDFDELVFEGALNAFAQRERRFGGTTPNG 248
>gi|87124748|ref|ZP_01080596.1| Undecaprenyl pyrophosphate synthetase (UPPS) [Synechococcus sp.
RS9917]
gi|86167627|gb|EAQ68886.1| Undecaprenyl pyrophosphate synthetase (UPPS) [Synechococcus sp.
RS9917]
Length = 266
Score = 284 bits (728), Expect = 5e-75, Method: Composition-based stats.
Identities = 92/240 (38%), Positives = 140/240 (58%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ A + +S P HI +IMDGNGRWA ARGLPR GHR G+E + ++ G+ LT
Sbjct: 17 LPADLDASRLPAHIAVIMDGNGRWAQARGLPRVMGHRAGVEALKTTLRLCSDWGVSALTA 76
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP E++ L+ L + L++ +L+ +++R +G+ +L + ++ EA
Sbjct: 77 YAFSTENWSRPGDEVNFLMTLFERVLQRELEALEAEQVRIRFLGDLQALPPRLQDLIAEA 136
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+T N G++ + NY R E+ RA +++ + G + +D + +A L T+
Sbjct: 137 TARTDENAGIHFNVCTNYGGRRELVRAARHLAEQAARGELDPAQIDENRLAAELFTAGEQ 196
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GE+R+S+FLLWQ+AY+E +WPDF AL Y R RRFGGL
Sbjct: 197 DPDLLIRTSGERRISNFLLWQLAYAEIHVTEVFWPDFDHAALLAALRDYQSRSRRFGGLQ 256
>gi|330445149|ref|ZP_08308801.1| di-trans,poly-cis-decaprenylcistransferase [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
gi|328489340|dbj|GAA03298.1| di-trans,poly-cis-decaprenylcistransferase [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
Length = 253
Score = 284 bits (728), Expect = 5e-75, Method: Composition-based stats.
Identities = 94/240 (39%), Positives = 140/240 (58%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + + P+HI +IMDGNGRWA A+G R GH+ G+E + V+ A +GIK LT+FA
Sbjct: 8 AGLSADCLPNHIAVIMDGNGRWAKAKGKARVFGHKAGVEAVRKTVSTANRLGIKALTLFA 67
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP +E+S L++L + L + L KNNI++R+IG+ + + AE
Sbjct: 68 FSSENWRRPEAEVSLLMELFMTVLSREVKRLHKNNIRLRIIGDTTRFSGRLQEKIATAEA 127
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTG+ L +A NY + +I A K + Q + ++ + L T +PD
Sbjct: 128 LTADNTGMVLNVAANYGGQWDILEAAKQLAQRAVDNDLDISELTEQDLESGLSTYGLPDV 187
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL+IRT GE R+S+F+LWQ AY+E F ++WPDF +A+ + R+RRFG ++
Sbjct: 188 DLLIRTSGECRVSNFMLWQTAYAELYFTEQHWPDFDETSLMNAVAWFVTRERRFGCTGEQ 247
>gi|330959203|gb|EGH59463.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 251
Score = 284 bits (728), Expect = 5e-75, Method: Composition-based stats.
Identities = 93/241 (38%), Positives = 146/241 (60%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ SS P H+ IIMDGN RWA R LP AGH+ G++ ++ AE ++ LT+F
Sbjct: 4 IKPAAPSSVPRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAEAKVEVLTLF 63
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E+ L++L + L++ L +N+I +R+IG+R ++ ++EAE
Sbjct: 64 AFSSENWQRPAEEVGALMELFFTALRRETKRLNENDISLRIIGDRSRFHPELQAAMREAE 123
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T N+ L IA NY + +I++A + + +++++G + ++ L+ L T D+P
Sbjct: 124 VRTSGNSRFVLQIAANYGGQWDIAQAAQRLAREVQAGHLQPDEITPDLLQSCLATGDLPL 183
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL IRTGGE R+S+FLLWQ+AY+E F +WPDF + AL + R RRFG S+
Sbjct: 184 PDLCIRTGGEHRISNFLLWQLAYAELYFSDLFWPDFKHDAMRVALADFASRQRRFGKTSE 243
Query: 242 K 242
+
Sbjct: 244 Q 244
>gi|331001981|ref|ZP_08325501.1| di-trans,poly-cis-decaprenylcistransferase [Lachnospiraceae oral
taxon 107 str. F0167]
gi|330411777|gb|EGG91182.1| di-trans,poly-cis-decaprenylcistransferase [Lachnospiraceae oral
taxon 107 str. F0167]
Length = 235
Score = 284 bits (728), Expect = 5e-75, Method: Composition-based stats.
Identities = 105/229 (45%), Positives = 141/229 (61%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P I II+DGNGRWA R LPR GH+ G E + V +G++ LT++AFS NW+
Sbjct: 6 IPKSIAIILDGNGRWAQKRNLPRAMGHKAGCEALEKTVEDCVRLGVECLTVYAFSTENWK 65
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ L+KL++ ++ K KNN+K +IG+ + DI +K+ D T NTG
Sbjct: 66 RSSVEVGALMKLLRFYMVKLIDVANKNNVKAVMIGDESRFEPDIRKGIKKLVDATSKNTG 125
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ A NY RDEI RAI NI D SG++ D++ LI+ YLDT ++PDPDL+IRT
Sbjct: 126 MTFAFAINYGGRDEIRRAINNIVDDTVSGAISKDDINEELISSYLDTKNLPDPDLLIRTS 185
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GE R+S+FLLWQ+AYSEF WPDF +E A+ Y+ R RRFGG
Sbjct: 186 GELRVSNFLLWQIAYSEFYITDTLWPDFDKEELLKAVESYSQRQRRFGG 234
>gi|229824927|ref|ZP_04450996.1| hypothetical protein GCWU000182_00276 [Abiotrophia defectiva ATCC
49176]
gi|229790930|gb|EEP27044.1| hypothetical protein GCWU000182_00276 [Abiotrophia defectiva ATCC
49176]
Length = 243
Score = 284 bits (728), Expect = 5e-75, Method: Composition-based stats.
Identities = 107/239 (44%), Positives = 157/239 (65%), Gaps = 4/239 (1%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ P H+ II+DGNGRWA RGLPR GH KG + + AA +GIK +T++AFS
Sbjct: 4 NEKIPTHVAIILDGNGRWAKKRGLPRNFGHLKGCDNVEPVCKAAFNIGIKYVTMYAFSTE 63
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW+RP +E+ EL+KL+ ++K KNN++VR+IG++ L D++ ++ E E+ +
Sbjct: 64 NWKRPQAEVDELMKLLAKYMKDAMKLSVKNNMRVRIIGDKTGLSDELNKLITELEELSGD 123
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQD----IESGSVCSHDVDSSLIAKYLDTSDVPDP 182
TGL L IA NY RD+I RA KNI + ++ + + + +I+K LDT+D+PDP
Sbjct: 124 FTGLQLQIAVNYGGRDDIRRAFKNIILEADKSGKTYNELADSLTEEVISKNLDTADIPDP 183
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRT GE+RLS++L+WQ+AY+E+ F WPDF ++ A+ Y+ RDRRFGGL K
Sbjct: 184 DLMIRTSGEQRLSNYLIWQLAYAEYFFTDTLWPDFGKKDLEEAIEFYSGRDRRFGGLKK 242
>gi|319779548|ref|YP_004130461.1| Undecaprenyl pyrophosphate synthetase [Taylorella equigenitalis
MCE9]
gi|317109572|gb|ADU92318.1| Undecaprenyl pyrophosphate synthetase [Taylorella equigenitalis
MCE9]
Length = 248
Score = 284 bits (728), Expect = 6e-75, Method: Composition-based stats.
Identities = 106/233 (45%), Positives = 139/233 (59%), Gaps = 1/233 (0%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI IIMDGNGRWA + LPR +GH KG++ V GI LT++AFS NWR
Sbjct: 16 VPKHIAIIMDGNGRWATKKNLPRTSGHIKGVQAVRNAVEFCIRNGISYLTVYAFSSENWR 75
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP SE++ L+KL K L K L KNNI+V ++G+R S +D+ ++ AED T+ N+
Sbjct: 76 RPASEVALLMKLFKKVLTKEIVKLHKNNIRVCIVGDRSSFSEDLQKLMDSAEDLTKNNSA 135
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L + I NY R +I AI N + S S + A Y+ SD+P+PDL IRTG
Sbjct: 136 LCVNICANYGGRWDILNAI-NELIKNNNYSFSSIPIKEEDFAPYISLSDIPEPDLCIRTG 194
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+RLS+FLLWQ AYSE F ++WPD F AL + R+RRFG S +
Sbjct: 195 GEQRLSNFLLWQTAYSELYFTNKFWPDMKLADFEDALKAFQARERRFGMTSDQ 247
>gi|239626442|ref|ZP_04669473.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239516588|gb|EEQ56454.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 239
Score = 284 bits (728), Expect = 6e-75, Method: Composition-based stats.
Identities = 105/231 (45%), Positives = 146/231 (63%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ +I+DGNGRWA RGLPR GH++G + V AA +GI+ LT++ FS NW+
Sbjct: 9 IPGHVALILDGNGRWAKRRGLPRTMGHKEGCVTVEKTVEIAARMGIRYLTVYGFSTENWK 68
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ L++L + ++ + NN++VR+IG+R DI+ + E QT+ NTG
Sbjct: 69 RSAEEVGALMQLFRYYMVRLLKIASANNVRVRMIGDRSRFAADIIEGINRLESQTKDNTG 128
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L IA NY RDEI RA + +D G V + +D SL + YLDT+ +PDPDL+IRT
Sbjct: 129 LTFVIAVNYGGRDEIRRAAARLAKDCADGKVDTDQIDESLFSSYLDTAGMPDPDLLIRTS 188
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
GE RLS++LLWQ+AY+E V WPDF++E A+ QYN RDRRFG +
Sbjct: 189 GELRLSNYLLWQLAYTEIVVTDCLWPDFNQEELEKAIVQYNKRDRRFGTVK 239
>gi|123443480|ref|YP_001007453.1| undecaprenyl pyrophosphate synthase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122090441|emb|CAL13309.1| undecaprenyl pyrophosphate synthetase [Yersinia enterocolitica
subsp. enterocolitica 8081]
Length = 252
Score = 284 bits (728), Expect = 6e-75, Method: Composition-based stats.
Identities = 88/230 (38%), Positives = 136/230 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R GH+ G++ V+ AA + LT++AFS NW R
Sbjct: 16 PRHVAIIMDGNGRWAKKQGKLRVFGHKAGVKSVRRAVSFAATHQLDALTLYAFSSENWNR 75
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L++L L SL K+N+++ VIG+ + + ++ +E+ T N GL
Sbjct: 76 PAQEVTALMELFVRALDSEVKSLHKHNVRLSVIGDISRFSERLQQRIRRSEELTANNDGL 135
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I + ++++ + ++ G + D+ + Y+ + + DL+IRTGG
Sbjct: 136 KLNIAANYGGRWDIIQGVRHLAEQVQRGELQPKDICEESLNSYICLHEQSEVDLVIRTGG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E R+S+FLLWQ+AY+E F WPDF +F ALN + R+RRFGG +
Sbjct: 196 EHRISNFLLWQIAYAELYFTDVLWPDFDEHVFEGALNAFAQRERRFGGTT 245
>gi|91775879|ref|YP_545635.1| undecaprenyl pyrophosphate synthetase [Methylobacillus flagellatus
KT]
gi|91709866|gb|ABE49794.1| Undecaprenyl pyrophosphate synthetase [Methylobacillus flagellatus
KT]
Length = 250
Score = 284 bits (728), Expect = 6e-75, Method: Composition-based stats.
Identities = 104/237 (43%), Positives = 141/237 (59%), Gaps = 3/237 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
++ P HI IIMDGNGRWA R LPR AGH++G+EV E+V A G+K LT+FAFS
Sbjct: 13 ITGDIPQHIAIIMDGNGRWAKKRFLPRVAGHKRGVEVVREVVRLCANHGVKYLTLFAFSS 72
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NWRRP E+S L+ L L++ L +NNI +R+IG+ D ++ + EAE +T
Sbjct: 73 ENWRRPADEVSFLMNLFMEALQQEVGKLDENNICLRMIGDCSRFDPALVAKIAEAEARTA 132
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N L L +A NY R +I +A+K + + + +A YL P+PDL
Sbjct: 133 GNDRLTLTVAVNYGGRWDIMQAMKRLLAEKPDLAQS---FTEEDLAAYLSMHYAPEPDLF 189
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTGGE+R+S+FLLWQ+AYSE F WPDF F A+ Y R+RRFG S++
Sbjct: 190 IRTGGEQRVSNFLLWQLAYSELYFTETLWPDFDEAEFKRAIVSYQQRERRFGRTSEQ 246
>gi|310779560|ref|YP_003967893.1| Undecaprenyl pyrophosphate synthetase [Ilyobacter polytropus DSM
2926]
gi|309748883|gb|ADO83545.1| Undecaprenyl pyrophosphate synthetase [Ilyobacter polytropus DSM
2926]
Length = 234
Score = 284 bits (728), Expect = 6e-75, Method: Composition-based stats.
Identities = 101/234 (43%), Positives = 142/234 (60%), Gaps = 7/234 (2%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HI IIMDGNGRWA RGLPR GHR G + +I+ A E+G+K LT++AFS NW
Sbjct: 7 KIPKHIAIIMDGNGRWAKKRGLPRTMGHRAGAKTLKKILTHAGELGVKYLTVYAFSTENW 66
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP +E+ L+KL K +LK ++ KN +++ V G + ++ +++ +++ E T N
Sbjct: 67 KRPQNEVDTLMKLFKEYLKNEKKTMMKNGVRLMVSGKKEGVNKELIEEIEKTEKLTEGND 126
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+ L IAFNY R EI A+ I +D + +V +KY+ D+PDP+L+IRT
Sbjct: 127 KITLNIAFNYGGRSEIVDAVNKILKDGVT------EVTEESFSKYMY-RDIPDPELLIRT 179
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE R+S+FLLWQ+AY+E WPDF ALN Y RDRRFGGL +
Sbjct: 180 SGEIRISNFLLWQIAYTELYITELTWPDFDESELEKALNTYMKRDRRFGGLKNE 233
>gi|23013454|ref|ZP_00053347.1| COG0020: Undecaprenyl pyrophosphate synthase [Magnetospirillum
magnetotacticum MS-1]
Length = 243
Score = 284 bits (728), Expect = 6e-75, Method: Composition-based stats.
Identities = 112/237 (47%), Positives = 158/237 (66%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M+++ PP H+ IIMDGNGRWA ARGLPR AGH++G E V AA E+G+ LT+
Sbjct: 4 MLSNADQPPPPAHVAIIMDGNGRWAKARGLPRTAGHKRGAEAVRRTVEAAREMGVSYLTL 63
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP EI++L+ L++ +L+ SL KN I+++VIG+R L DI+ +++++
Sbjct: 64 YAFSSENWKRPAGEITDLMGLLRLYLRNEVNSLHKNGIRLKVIGDRTRLGADIIRLIEDS 123
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E +T NT L L +A +Y R EI A + + QD+ G V + DVD I L T+ +P
Sbjct: 124 EAKTAGNTALTLLLALSYGGRQEIVAAARVLAQDVADGKVAAEDVDEDAINARLSTAGIP 183
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DPD+IIRT GE+R+S+FLLWQ AY+E VF+ WPDF R A+ ++ RDRRFG
Sbjct: 184 DPDMIIRTSGEQRISNFLLWQGAYAELVFMDTLWPDFGRSELESAIRDFHGRDRRFG 240
>gi|304439993|ref|ZP_07399886.1| di-trans,poly-cis-decaprenylcistransferase [Peptoniphilus duerdenii
ATCC BAA-1640]
gi|304371485|gb|EFM25098.1| di-trans,poly-cis-decaprenylcistransferase [Peptoniphilus duerdenii
ATCC BAA-1640]
Length = 237
Score = 284 bits (728), Expect = 6e-75, Method: Composition-based stats.
Identities = 100/237 (42%), Positives = 145/237 (61%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ + P HIGIIMDGNGRWA + R GH++G E +IV + +G+K LT++A
Sbjct: 1 MEIDLNKVPAHIGIIMDGNGRWAKNKNKIRSFGHKEGAERVIDIVEESYRLGVKYLTLYA 60
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW+RP E+ L+ L+ SF+ K L +N +K+ V+G+ LDD +K+A +
Sbjct: 61 FSTENWKRPADEVGYLMTLLNSFIDKKLKRLHENGVKINVLGDIDRLDDGTFKSVKKAIE 120
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T+ N + L IA +Y R EI RA K I +D + G + D+ +L T D+P
Sbjct: 121 TTKDNKKMVLNIALSYGGRAEIVRASKLIARDYKDGKLNLPDITEDSFNDFLYTKDIPPV 180
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DL+IR GGEKR+S+FLL+Q+AY+EF+F+ WPDF E A+ +Y R+RR+GGL
Sbjct: 181 DLLIRPGGEKRISNFLLYQLAYAEFIFVDTLWPDFREENLREAILEYQNRNRRYGGL 237
>gi|145300057|ref|YP_001142898.1| undecaprenyl pyrophosphate synthetase [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142852829|gb|ABO91150.1| undecaprenyl pyrophosphate synthetase [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 258
Score = 284 bits (728), Expect = 6e-75, Method: Composition-based stats.
Identities = 97/245 (39%), Positives = 151/245 (61%), Gaps = 3/245 (1%)
Query: 1 MVASM---MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKN 57
++A++ +SS P H+ IIMDGNGRWA RG R GH+ G++ E V AA I+
Sbjct: 3 LLAALGDCANSSLPRHVAIIMDGNGRWAQNRGKMRVYGHKAGVKSVREAVTFAARAKIEA 62
Query: 58 LTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
LT+FAFS NWRRP E+S L++L + L + L N I+++VIG+ + + +
Sbjct: 63 LTLFAFSSENWRRPEGEVSALMELFMTVLGREVKQLHSNGIRLKVIGDTARFSERLQARI 122
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+AE T N GL L IA NY + +I++A + + + + +G + + +D SL+A+ + +
Sbjct: 123 AKAEALTADNKGLTLNIAANYGGQWDIAQAARKLARAVAAGELDADAIDESLLAEQVCMA 182
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
D+P DL+IRTGG+ R+S+F+LWQ+AY+E F P WPDF+ F A+ + R+RRFG
Sbjct: 183 DLPPVDLLIRTGGDHRISNFVLWQLAYAELYFTPVLWPDFNEAEFSEAVASFVARERRFG 242
Query: 238 GLSKK 242
++
Sbjct: 243 CTGEQ 247
>gi|284051894|ref|ZP_06382104.1| undecaprenyl pyrophosphate synthase [Arthrospira platensis str.
Paraca]
Length = 253
Score = 284 bits (728), Expect = 6e-75, Method: Composition-based stats.
Identities = 93/239 (38%), Positives = 142/239 (59%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ A + + P+H+ +IMDGNGRWA RGLPR GHR+GI+ ++ + GI LT+
Sbjct: 11 LPADLDRNRLPNHVAVIMDGNGRWAKRRGLPRTMGHRRGIDALKNLLRYCRDWGINALTV 70
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP+ E+ L+ L + L + + + +++R +GN L + ++++
Sbjct: 71 YAFSTENWGRPLEEVDFLMALFERVLMRELEEMMEEEVRIRFVGNLHRLPASLRECIEKS 130
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ TR N G+ +A NY R+EI RA + I ++ G++ +D +L KYL T+
Sbjct: 131 METTRNNEGILFTVATNYGGREEIVRACQAIANQVKQGTLEPEAIDGALFEKYLYTAGTC 190
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRT GE R+S+FLLWQ+AY+E WPDF+ F AL Y R+RRFG +
Sbjct: 191 DPDLLIRTSGELRISNFLLWQIAYAEIYVTDTLWPDFNSHEFHQALCSYQQRERRFGKV 249
>gi|242240391|ref|YP_002988572.1| undecaprenyl diphosphate synthase [Dickeya dadantii Ech703]
gi|242132448|gb|ACS86750.1| undecaprenyl diphosphate synthase [Dickeya dadantii Ech703]
Length = 253
Score = 284 bits (728), Expect = 6e-75, Method: Composition-based stats.
Identities = 93/231 (40%), Positives = 138/231 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG R GH+ G++ V+ A ++ LT++AFS NW R
Sbjct: 17 PRHVAIIMDGNGRWAKQRGRLRIFGHQAGVKSVRRAVSYAVSHHLEALTLYAFSSENWNR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L++L L SL K+N+++RVIG+ + ++ +E T N+GL
Sbjct: 77 PAQEVASLMELFVRALDSEVKSLHKHNVRLRVIGDISRFSARLQERIRRSESLTEKNSGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I +K I + ++ G + ++D S + +Y+ SD+ DL+IRTGG
Sbjct: 137 TLNIAANYGGRWDIINGVKKIAEQVQEGVLRPDNIDESTLCRYVCLSDLAPVDLVIRTGG 196
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E R+S+FLLWQ+AY+E F WPDF + F A+N ++ R+RRFGG
Sbjct: 197 EHRISNFLLWQIAYAELYFTDVLWPDFDEQTFEGAINAFSQRERRFGGTEA 247
>gi|304312452|ref|YP_003812050.1| Undecaprenyl pyrophosphate synthetase [gamma proteobacterium HdN1]
gi|301798185|emb|CBL46407.1| Undecaprenyl pyrophosphate synthetase [gamma proteobacterium HdN1]
Length = 278
Score = 284 bits (728), Expect = 6e-75, Method: Composition-based stats.
Identities = 86/241 (35%), Positives = 135/241 (56%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ S P H+ IIMDGN RWA RGL GH++G + V A G++ LT++
Sbjct: 10 LGDQSSQGVPRHLAIIMDGNNRWARQRGLRGVEGHKQGARAVRDTVENCARAGVEVLTVY 69
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP E+ L++L + L L KN I++R IG+ + + +++A
Sbjct: 70 AFSSENWRRPQEEVDALMELFLASLADEVPDLHKNQIQLRFIGDLSAFSPRLREKMQQAV 129
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T N + +A NY +I+ A + + +++ G + +++ + + +++ D+P
Sbjct: 130 SLTANNQRMVFAVAVNYGGHWDITNAARLLALEVQEGRLQPNEITAERMQQFIALGDLPL 189
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL IRTGGE+R+S+FLLWQ+AY+E F YWPDF ++ A Y R RRFG S+
Sbjct: 190 PDLCIRTGGEQRISNFLLWQLAYAELYFTESYWPDFDQQALQQAFVDYQGRQRRFGRTSE 249
Query: 242 K 242
+
Sbjct: 250 Q 250
>gi|120555455|ref|YP_959806.1| undecaprenyl diphosphate synthase [Marinobacter aquaeolei VT8]
gi|120325304|gb|ABM19619.1| Undecaprenyl pyrophosphate synthetase [Marinobacter aquaeolei VT8]
Length = 256
Score = 284 bits (728), Expect = 6e-75, Method: Composition-based stats.
Identities = 94/238 (39%), Positives = 147/238 (61%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + + P H+ IIMDGN RWA A L GH+ G++ +V A+ G++ LT+FAFS
Sbjct: 11 VAADNCPRHVAIIMDGNNRWAKAHRLKGVVGHKAGVDAVKAVVETCAKEGVEVLTLFAFS 70
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRRP E+S L++L L++ L +NNI++R+IG+R + + + +++AE T
Sbjct: 71 SENWRRPKDEVSALMRLFLIALEREVRKLHRNNIRLRIIGDRSAFNPALQEHMEKAEALT 130
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
R NT + + IA NY +I++A + + + +++G + D+ LI ++L D+P PDL
Sbjct: 131 RDNTRMTVVIAANYGGHWDITQATRKVAEQVKAGQLEPSDITDDLIQEHLSIGDLPMPDL 190
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IRT GE+R+S+FLLW +AY+EF F +WPDF E AL+ Y R RRFG +
Sbjct: 191 LIRTAGEQRISNFLLWHLAYTEFYFSEVFWPDFKSEQMLKALDAYAHRQRRFGQTDDQ 248
>gi|78213156|ref|YP_381935.1| undecaprenyl pyrophosphate synthetase [Synechococcus sp. CC9605]
gi|78197615|gb|ABB35380.1| undecaprenyl diphosphate synthase [Synechococcus sp. CC9605]
Length = 260
Score = 284 bits (727), Expect = 6e-75, Method: Composition-based stats.
Identities = 88/239 (36%), Positives = 137/239 (57%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ A + P H+ +IMDGNGRWA ++GLPR GHR G+E + ++ GI LT
Sbjct: 17 LPADLDPGRLPQHVALIMDGNGRWAKSQGLPRVMGHRAGVEALKSTLRLCSDWGIHALTA 76
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP E++ L+ L + L+ +L+ +++R +G+ +L + ++ +A
Sbjct: 77 YAFSTENWSRPGEEVNFLMTLFERVLQAELQALEAEQVRIRFLGDLKALPQKLQELIADA 136
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+T N G++ + NY R E+ +A + + Q +G + +D + IA L T+
Sbjct: 137 TARTAGNNGIHFNVCTNYGGRRELVQAAQRLAQRAAAGELDPDSIDENSIAAELFTAGEQ 196
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRT GE R+S+FLLWQ+AY+E WPDF+ + AL + R RRFGGL
Sbjct: 197 DPDLLIRTSGEHRISNFLLWQLAYAEIHVTDVLWPDFNADALKAALLDFQRRHRRFGGL 255
>gi|171463275|ref|YP_001797388.1| undecaprenyl diphosphate synthase [Polynucleobacter necessarius
subsp. necessarius STIR1]
gi|171192813|gb|ACB43774.1| undecaprenyl diphosphate synthase [Polynucleobacter necessarius
subsp. necessarius STIR1]
Length = 257
Score = 284 bits (727), Expect = 6e-75, Method: Composition-based stats.
Identities = 93/235 (39%), Positives = 141/235 (60%), Gaps = 2/235 (0%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S+ P H+ IIMDGNGRWA+ R +PR AGH +G+ +IV ++G++ LT+FAFS N
Sbjct: 15 SAVPRHVAIIMDGNGRWASKRMMPRVAGHSEGLSAVRKIVQECRKLGVEYLTVFAFSSEN 74
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+ L+KL LK L +N+I +R+IG+ + I +++ +E +T
Sbjct: 75 WRRPPEEVGFLMKLFLKSLKGEVSRLAENDIALRLIGDLSRFNSAIQEMVEFSEKKTAGC 134
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
GL IA NY R +I +A++ + + ++ V L+ +L + P+PDL IR
Sbjct: 135 KGLTFTIAANYGGRWDILQAMRQCL--VANPNLKPEQVSEELLQPHLSMAYAPEPDLFIR 192
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE+R+S+FLLWQ+AY+E F WPDF + A + ++ R+RRFG S +
Sbjct: 193 TGGEQRISNFLLWQLAYTELYFTDILWPDFDEKELHKAFDWFSQRERRFGRTSAQ 247
>gi|39935983|ref|NP_948259.1| undecaprenyl pyrophosphate synthase [Rhodopseudomonas palustris
CGA009]
gi|192291636|ref|YP_001992241.1| undecaprenyl pyrophosphate synthase [Rhodopseudomonas palustris
TIE-1]
gi|39649837|emb|CAE28359.1| undecaprenyl pyrophosphate synthetase [Rhodopseudomonas palustris
CGA009]
gi|192285385|gb|ACF01766.1| undecaprenyl diphosphate synthase [Rhodopseudomonas palustris
TIE-1]
Length = 252
Score = 284 bits (727), Expect = 6e-75, Method: Composition-based stats.
Identities = 117/230 (50%), Positives = 163/230 (70%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWAAARGLPR GHR+G+E +V A++E+GI+ LTIF+FS NW RP
Sbjct: 20 HVAIIMDGNGRWAAARGLPRAEGHRRGVEALRRVVRASSELGIQYLTIFSFSSENWARPA 79
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+EI +L L++ F++ SL ++ +++RVIG R LD D+ +L EA++ TR NT LNL
Sbjct: 80 TEIVDLFGLLRRFIRNDLASLHRDGVRIRVIGERDRLDRDLCAMLDEAQELTRNNTKLNL 139
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+AFNY SR EI+ A + + +++ G +D + +YLD D+PDPDLIIRT GE+
Sbjct: 140 VVAFNYGSRQEIANAAQRLAREVAEGKRDPATIDIETLGRYLDAPDIPDPDLIIRTSGEQ 199
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RLS+FL+WQ AYSE VF+P +WPDF + A+ +Y+ R+RRFGGL+ K
Sbjct: 200 RLSNFLMWQAAYSELVFVPIHWPDFDKAALEGAIAEYSRRERRFGGLAAK 249
>gi|261400101|ref|ZP_05986226.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria lactamica
ATCC 23970]
gi|313667489|ref|YP_004047773.1| undecaprenyl diphosphate synthase [Neisseria lactamica ST-640]
gi|269210328|gb|EEZ76783.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria lactamica
ATCC 23970]
gi|313004951|emb|CBN86378.1| putative undecaprenyl diphosphate synthase [Neisseria lactamica
020-06]
Length = 248
Score = 284 bits (727), Expect = 7e-75, Method: Composition-based stats.
Identities = 100/240 (41%), Positives = 146/240 (60%), Gaps = 6/240 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + ++ P HI +IMDGNGRWA R LPR GH++G++ +V A +G++ LT+FA
Sbjct: 7 AVLEHTAIPRHIAVIMDGNGRWAKKRFLPRIMGHKRGLDALENMVKHCAGLGVRYLTVFA 66
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP E+S L+ L L+K L +NN++++++G+R + IL ++EAE
Sbjct: 67 FSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNMRLKILGSRERFNRQILQGIEEAEA 126
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTGL L IA +Y R +I +A + D ++ ++AKYL D P+P
Sbjct: 127 LTANNTGLTLSIAADYGGRWDILQAANRLLADGV------SEITEDMLAKYLMLGDAPEP 180
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL IRTGGE R+S+FLLWQ+AY+E F WPDF A++ + R+RRFG S++
Sbjct: 181 DLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDETALDAAVSSFQKRERRFGRTSEQ 240
>gi|116051649|ref|YP_789512.1| undecaprenyl pyrophosphate synthetase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|115586870|gb|ABJ12885.1| undecaprenyl pyrophosphate synthetase [Pseudomonas aeruginosa
UCBPP-PA14]
Length = 251
Score = 284 bits (727), Expect = 7e-75, Method: Composition-based stats.
Identities = 94/233 (40%), Positives = 142/233 (60%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IIMDGN RWA R LP AGH+ G++ ++ AE G++ LT+FAFS NW+
Sbjct: 10 VPRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAEAGVEVLTLFAFSSENWQ 69
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+S L++L L++ L +N I++R+IG+R ++ ++EAE T NT
Sbjct: 70 RPADEVSALMELFLVALRREVRKLDENGIRLRIIGDRTRFHPELQAAMREAEAATASNTR 129
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L +A NY + +I +A + + ++++ G + + D+ + L+ L T D P PDL IRTG
Sbjct: 130 FLLQVAANYGGQWDIVQAAQRLAREVQGGHLAADDISAELLQGCLVTGDQPLPDLCIRTG 189
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE R+S+FLLWQ+AY+E F +WPDF AL ++ R RRFG S++
Sbjct: 190 GEHRISNFLLWQLAYAELYFSDLFWPDFKHAAMRAALADFSKRQRRFGKTSEQ 242
>gi|170723239|ref|YP_001750927.1| undecaprenyl diphosphate synthase [Pseudomonas putida W619]
gi|169761242|gb|ACA74558.1| undecaprenyl diphosphate synthase [Pseudomonas putida W619]
Length = 251
Score = 284 bits (727), Expect = 7e-75, Method: Composition-based stats.
Identities = 97/236 (41%), Positives = 146/236 (61%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
SS P H+ IIMDGN RWA R LP AGH+ G++ ++ A+ G++ LT+FAFS
Sbjct: 9 PSSVPRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAKSGVEVLTLFAFSSE 68
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW+RP E+ L++L S L++ L +NNI +R+IG+R ++ ++EAE QT
Sbjct: 69 NWQRPAEEVGALMELFFSALRREAKRLNENNISLRIIGDRSRFHPELQAAMREAEAQTAG 128
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
+ L IA NY + +I++A + + +++++G + D+ L+ L T ++P PDL I
Sbjct: 129 SNRFILQIAANYGGQWDIAQAAQRLAREVQAGHLRPDDITPGLLQACLATGELPLPDLCI 188
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE R+S+FLLWQ+AY+E F YWPDF E +AL + R RRFG S++
Sbjct: 189 RTGGEHRISNFLLWQLAYAELYFSDLYWPDFKHEAMRNALADFASRQRRFGKTSEQ 244
>gi|303258059|ref|ZP_07344067.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderiales
bacterium 1_1_47]
gi|302859078|gb|EFL82161.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderiales
bacterium 1_1_47]
Length = 248
Score = 284 bits (727), Expect = 7e-75, Method: Composition-based stats.
Identities = 96/241 (39%), Positives = 140/241 (58%), Gaps = 6/241 (2%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + P H+ I+MDGNGRWA AR LPR GH+KG+E + AA+ G+++LT+F
Sbjct: 6 LTAKPRERVPRHVAIVMDGNGRWAKARKLPRLMGHQKGVESVRTAIQTAAKAGVQHLTLF 65
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+ L+KL L++ +L K N++VR++G+ + +++ + ++
Sbjct: 66 AFSSENWNRPAEEVKGLMKLFLVSLRREIAALNKANVRVRLVGDLTAFSEELQQQIADSM 125
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T NTGL L + NY R EI A K S V ++ A L +D D
Sbjct: 126 KITENNTGLTLNVCVNYGGRWEILEAAKR------SREVPPEELTEQRFASLLPLADSGD 179
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL IRT GE+R+S+F+LWQ+AY E F WPDF+ F +ALN Y+ R+RRFG S+
Sbjct: 180 VDLFIRTSGEERISNFMLWQLAYGELYFTKILWPDFTENEFLNALNWYSNRERRFGKTSE 239
Query: 242 K 242
+
Sbjct: 240 Q 240
>gi|160940989|ref|ZP_02088328.1| hypothetical protein CLOBOL_05883 [Clostridium bolteae ATCC
BAA-613]
gi|158436079|gb|EDP13846.1| hypothetical protein CLOBOL_05883 [Clostridium bolteae ATCC
BAA-613]
Length = 252
Score = 284 bits (727), Expect = 7e-75, Method: Composition-based stats.
Identities = 103/231 (44%), Positives = 146/231 (63%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P+H+ +I+DGNGRWA RGLPR GH++G + V AA +GI+ LT++ FS NW+
Sbjct: 22 IPEHVALILDGNGRWAKKRGLPRTLGHKEGCVTVEKTVEIAARMGIRYLTVYGFSTENWK 81
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ L++L + ++ + NN++V++IG+R D DI+ + E +T+ NTG
Sbjct: 82 RSAEEVGALMQLFRYYMVRLLKIASANNVRVKMIGDRSRFDRDIIDGINRLESETQDNTG 141
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L IA NY RDEI RA + +D G VD +L A YLDT+ +PDPDL+IRT
Sbjct: 142 LTFVIAVNYGGRDEIRRAAAGLARDCALGKADPDQVDEALFASYLDTAGMPDPDLLIRTS 201
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
GE RLS++LLWQ+AY+E V WPDF++E A+ QYN R+RRFG +
Sbjct: 202 GELRLSNYLLWQLAYTEIVVTDCLWPDFNQEELEKAIVQYNKRERRFGAVK 252
>gi|27379968|ref|NP_771497.1| undecaprenyl pyrophosphate synthase [Bradyrhizobium japonicum USDA
110]
gi|42559965|sp|Q89KP7|UPPS2_BRAJA RecName: Full=Undecaprenyl pyrophosphate synthase 2; Short=UPP
synthase 2; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase 2;
AltName: Full=Undecaprenyl diphosphate synthase 2;
Short=UDS 2
gi|27353121|dbj|BAC50122.1| undecaprenyl pyrophosphate synthase [Bradyrhizobium japonicum USDA
110]
Length = 252
Score = 284 bits (727), Expect = 8e-75, Method: Composition-based stats.
Identities = 117/232 (50%), Positives = 161/232 (69%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWAAARGLPR GHR+G+E +V A+ E+GI+ LTIF+FS NW R
Sbjct: 18 PAHVAIIMDGNGRWAAARGLPRAEGHRRGVEALRRVVRASHELGIRYLTIFSFSSENWSR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SEI +L L++ F++ SL ++ +KVR+IG R L+ DI +L EAE+ TR N+ L
Sbjct: 78 PASEIGDLFGLLRRFIRNDLASLHRDGVKVRIIGERDGLESDICALLNEAEELTRDNSRL 137
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +AFNY SR EI++A + + +++ G +D+ + +LD D+PDPDLIIRT G
Sbjct: 138 TLVVAFNYGSRQEIAKAAQKLAREVAEGRRDPATIDAETLGAHLDAPDIPDPDLIIRTSG 197
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+RLS+FL+WQ AYSE VF+P +WPDF + A+ ++ R+RRFGGL K
Sbjct: 198 EQRLSNFLMWQAAYSELVFVPIHWPDFDKAALEGAIAEFARRERRFGGLVAK 249
>gi|85716992|ref|ZP_01047955.1| di-trans-poly-cis-decaprenylcistransferase [Nitrobacter sp.
Nb-311A]
gi|85696194|gb|EAQ34089.1| di-trans-poly-cis-decaprenylcistransferase [Nitrobacter sp.
Nb-311A]
Length = 252
Score = 284 bits (727), Expect = 8e-75, Method: Composition-based stats.
Identities = 122/237 (51%), Positives = 164/237 (69%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ P H+ IIMDGNGRWAAARGLPR GHR+G+E +V AA E+ I LTIF+FS
Sbjct: 14 PADTPLHVAIIMDGNGRWAAARGLPRAEGHRRGVEALRRVVRAAGELNILYLTIFSFSSE 73
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP SEI++L L++ F++ +L ++ ++VRVIG R L+ DI +L EAED TR
Sbjct: 74 NWSRPRSEINDLFGLLRRFVRNDLATLHRDGVRVRVIGERAGLEPDICALLTEAEDLTRN 133
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N+ LNL +AFNY SR EI+ A + + +++ G +D+ + +YLD D+PDPDLII
Sbjct: 134 NSRLNLVVAFNYGSRHEIASAAQRLAREVADGKRDPATIDADTLGRYLDAPDIPDPDLII 193
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
RT GE+RLS+FL+WQ AYSEFVF+P +WPDF R A+ +Y R+RRFGGL+ K
Sbjct: 194 RTSGEQRLSNFLMWQAAYSEFVFVPMHWPDFDRAALEGAIAEYARRERRFGGLAAKA 250
>gi|241762002|ref|ZP_04760086.1| undecaprenyl diphosphate synthase [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|260752419|ref|YP_003225312.1| undecaprenyl pyrophosphate synthase [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
gi|241373468|gb|EER63055.1| undecaprenyl diphosphate synthase [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|258551782|gb|ACV74728.1| undecaprenyl diphosphate synthase [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
Length = 248
Score = 284 bits (727), Expect = 8e-75, Method: Composition-based stats.
Identities = 107/230 (46%), Positives = 151/230 (65%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IIMDGNGRWA+AR LPR AGH+KG + V AAAE+GI+ LT++AFS NWR
Sbjct: 19 VPRHVAIIMDGNGRWASARHLPRIAGHKKGADAVKTTVRAAAEMGIEVLTLYAFSSENWR 78
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP SE+++L+ L++ L++ +++K+ I ++VIG+ LD D++ +L +A + T NT
Sbjct: 79 RPASEVADLMGLLRLCLRQEMHNIKERGICLKVIGDYTRLDQDLVALLNQAIEITANNTR 138
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L A NY ++DE+ K I + G + ++D I L T D+P DL+IRT
Sbjct: 139 LTLVFALNYGAQDELVHVTKRIAEKAREGQLDPENIDVGTIESLLYTHDLPPLDLVIRTS 198
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GEKRLS+FLLWQ AY+E +FI WPDF E A+ +Y R+RR+GGL
Sbjct: 199 GEKRLSNFLLWQAAYAELLFIDTLWPDFGSETLKAAVEEYARRERRYGGL 248
>gi|94310381|ref|YP_583591.1| undecaprenyl pyrophosphate synthetase [Cupriavidus metallidurans
CH34]
gi|93354233|gb|ABF08322.1| undecaprenyl pyrophosphate synthase [Cupriavidus metallidurans
CH34]
Length = 256
Score = 284 bits (726), Expect = 8e-75, Method: Composition-based stats.
Identities = 102/233 (43%), Positives = 145/233 (62%), Gaps = 2/233 (0%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IIMDGNGRWA R LPR AGH +G++ EIV A A G++ LT+FAFS NWR
Sbjct: 16 VPRHVAIIMDGNGRWATQRHLPRVAGHNRGLDAVREIVQACAARGVQYLTLFAFSSENWR 75
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+S L++L + L++ + NNI++RV+G+ I +K+AE +T NTG
Sbjct: 76 RPADEVSFLMRLFMTALRREVVRMHANNIRLRVVGDLSRFSPRIQQAIKDAEARTEGNTG 135
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L + IA NY R ++ +A++ + S + S +D S++A +L + P+PDL IRTG
Sbjct: 136 LTVTIAANYGGRWDLLQAMRKML--ARSPLLDSDAIDESVLAPHLAMAYAPEPDLFIRTG 193
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+R+S+FLLWQ+AY+E F +WPDF A Y R+RRFG S +
Sbjct: 194 GEQRISNFLLWQLAYTELYFTETFWPDFDAAELDKAFASYRQRERRFGRTSAQ 246
>gi|229092863|ref|ZP_04223997.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus Rock3-42]
gi|228690485|gb|EEL44268.1| Undecaprenyl pyrophosphate synthetase [Bacillus cereus Rock3-42]
Length = 222
Score = 284 bits (726), Expect = 8e-75, Method: Composition-based stats.
Identities = 102/222 (45%), Positives = 147/222 (66%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA R +PR AGH +G++V +I A+++ +K LT++AFS NW+RP E+
Sbjct: 1 MDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLNVKVLTLYAFSTENWKRPKKEVDY 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+KL + FL L + N++VRVIG + L +++A ++T+ NTGL L A N
Sbjct: 61 LMKLPEEFLGTFLPELIEENVQVRVIGQQDRLPTHTRRAMEKAMEETKENTGLILNFALN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y SRDEI A++++ +D E G V DV +++ YL TS +PDP+L+IRT GE R+S+F
Sbjct: 121 YGSRDEIVSAVQHMMKDSEEGKVRVEDVSEEMLSSYLMTSSLPDPELLIRTSGELRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+LWQ+AYSEF F YWPDF+ E +A+ + R RRFGG+
Sbjct: 181 MLWQIAYSEFWFTDVYWPDFTEEHLLNAITDFQHRGRRFGGV 222
>gi|257094440|ref|YP_003168081.1| undecaprenyl diphosphate synthase [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257046964|gb|ACV36152.1| undecaprenyl diphosphate synthase [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 264
Score = 284 bits (726), Expect = 8e-75, Method: Composition-based stats.
Identities = 101/236 (42%), Positives = 142/236 (60%), Gaps = 3/236 (1%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+S P H+ IIMDGNGRWA R LPR AGHR+G+E V A E GI+ LT+FAFS
Sbjct: 14 TSVVPRHVAIIMDGNGRWARKRLLPRFAGHRRGVETVRATVRACLERGIEYLTLFAFSSE 73
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+S L++L L++ L +N +++RVIG+ + D+ ++ +E +T
Sbjct: 74 NWRRPEEEVSLLMQLFVRALREEVTKLDRNGVRLRVIGDLSRFEPDLRALIDVSEQRTAT 133
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NT L L +A NY R +I +A+ + ++ S +A +L P+PDL I
Sbjct: 134 NTRLVLTVAANYGGRWDILQAVNRLLTSEPERRG---ELTESDLAPHLAMHYAPEPDLFI 190
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE+R+S+FLLWQ+AYSE F WP+F + F AL Y R+RRFG S++
Sbjct: 191 RTGGEQRISNFLLWQLAYSEIYFTDVLWPEFDSKAFDAALQSYQQRERRFGRTSEQ 246
>gi|298373781|ref|ZP_06983770.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroidetes oral
taxon 274 str. F0058]
gi|298274833|gb|EFI16385.1| di-trans,poly-cis-decaprenylcistransferase [Bacteroidetes oral
taxon 274 str. F0058]
Length = 250
Score = 284 bits (726), Expect = 8e-75, Method: Composition-based stats.
Identities = 108/234 (46%), Positives = 157/234 (67%), Gaps = 1/234 (0%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P+HI I+MDGNGRWA +G R GH GI +I AAAEVGIK LT++ FS NW
Sbjct: 11 LPEHIAIVMDGNGRWAKQKGFDRIFGHTNGINTVRQITEAAAEVGIKYLTLYTFSTENWN 70
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP EI ++KL+ ++K + +KNN+++ IG+ L L +D+ L+ +T NTG
Sbjct: 71 RPQEEIHGIMKLLVESIEKESETFRKNNVRLLAIGDLLRLPEDVNKKLQTCIAETSSNTG 130
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGS-VCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
L+L +A +YSSR EI+ AIKNI +D SG +D ++I+ YL T ++PDPD++IRT
Sbjct: 131 LSLVLALSYSSRWEITNAIKNIAKDCLSGKIDDIGLIDETVISDYLTTRNIPDPDIVIRT 190
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GG+ R+S+FLLWQ AY+EF F YWP+F+++ FF ++++ R+RRFG S++
Sbjct: 191 GGDIRISNFLLWQAAYAEFFFTKTYWPEFTKDEFFRIISEFQNRERRFGKTSEQ 244
>gi|85712042|ref|ZP_01043096.1| Undecaprenyl pyrophosphate synthase [Idiomarina baltica OS145]
gi|85694228|gb|EAQ32172.1| Undecaprenyl pyrophosphate synthase [Idiomarina baltica OS145]
Length = 257
Score = 284 bits (726), Expect = 9e-75, Method: Composition-based stats.
Identities = 95/237 (40%), Positives = 147/237 (62%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ P H+ IIMDGNGRWA +G R GH+KG E V+ A GI++LT+FAFS
Sbjct: 7 IQQVMPKHVAIIMDGNGRWAKQQGKRRTFGHKKGAEAVRRAVSFARRNGIQSLTLFAFSS 66
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP +E+S L++L + LKK LK+N+IK++VIG++ + +++ E+ T
Sbjct: 67 ENWNRPAAEVSLLMELFINVLKKEADKLKQNDIKLQVIGDKTQFSSRLRKHIEQTEEMTA 126
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
G+ L IA NY + +I++A + + + + + + D+ +YL +D PDL+
Sbjct: 127 ECRGMTLNIAANYGGQWDITQATRKVATAVANNELAASDITERTFERYLCLADQAKPDLL 186
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTGGE+R+S+FLLWQ+AY+EF F P WPDF + F A+ ++ R+RR+G S++
Sbjct: 187 IRTGGEQRVSNFLLWQIAYAEFYFSPILWPDFDDQAFASAVAEFAQRERRYGLTSEQ 243
>gi|197119125|ref|YP_002139552.1| undecaprenyl pyrophosphate synthase [Geobacter bemidjiensis Bem]
gi|197088485|gb|ACH39756.1| undecaprenyl diphosphate synthase [Geobacter bemidjiensis Bem]
Length = 249
Score = 284 bits (726), Expect = 9e-75, Method: Composition-based stats.
Identities = 98/239 (41%), Positives = 143/239 (59%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S+ + P H+ +IMDGNGRWA R L R GH+KG+E IV + +GI LT+FAF
Sbjct: 3 SLDRKNLPAHLAVIMDGNGRWAKQRMLRRIVGHQKGVETVRVIVEECSRLGIGYLTLFAF 62
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP +E+ L+ L+K +++ + +N+I+ VIGNR L +D+ ++ A +
Sbjct: 63 SAENWLRPKTEVKALMALLKQYIRGETARMMQNDIRFNVIGNRCDLPEDVNREIESAIQK 122
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T N G+ L +A +Y SR EI A K + +D +G + +D + L T+ +PDPD
Sbjct: 123 TAGNRGMLLTLALSYGSRQEIVAAAKRLAKDAAAGRLDPEAIDEASFTGSLFTAGIPDPD 182
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRT GE R+S+FLLWQ+AY+E F WPDF R A + R+RRFG S++
Sbjct: 183 LLIRTSGEMRISNFLLWQLAYAELYFTEVNWPDFDRNELARAFRDFQSRERRFGMTSEQ 241
>gi|261344731|ref|ZP_05972375.1| di-trans,poly-cis-decaprenylcistransferase [Providencia rustigianii
DSM 4541]
gi|282567173|gb|EFB72708.1| di-trans,poly-cis-decaprenylcistransferase [Providencia rustigianii
DSM 4541]
Length = 250
Score = 284 bits (726), Expect = 9e-75, Method: Composition-based stats.
Identities = 98/236 (41%), Positives = 142/236 (60%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
++ S P H+ IIMDGNGRWA RG R GHR G+E V A + I +LT++A
Sbjct: 6 ENLSESMMPKHVAIIMDGNGRWAKQRGKFRITGHRAGVESVRSSVRFAVKNKISSLTLYA 65
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW+RP E+S L+ L L +L KNN+K+++IG+ + + + +AE
Sbjct: 66 FSSENWKRPEKEVSSLMDLFVFALDNEVKNLHKNNVKLKIIGDVSRFSETLRKRIDKAEA 125
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTGL L IA NY R +I ++K ++ + G + DVD I++++ D +
Sbjct: 126 LTADNTGLQLNIAANYGGRWDIVNSVKQVYGKVSRGELSIDDVDECAISQHICMHDQENV 185
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DL+IRTGGE R+S+FLLWQVAY+EF F WPDF +F A++ ++ R+RR+GG
Sbjct: 186 DLVIRTGGEHRISNFLLWQVAYAEFYFTNVLWPDFDETVFQSAVDAFSQRERRYGG 241
>gi|332967740|gb|EGK06847.1| di-trans,poly-cis-decaprenylcistransferase [Kingella kingae ATCC
23330]
Length = 250
Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats.
Identities = 101/233 (43%), Positives = 142/233 (60%), Gaps = 6/233 (2%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IIMDGNGRWA R LPR GH+KG++V E + G+K LT+FAFS NWR
Sbjct: 15 VPHHVAIIMDGNGRWAKKRFLPRVMGHKKGLDVLEEQCRICNKAGVKFLTVFAFSTENWR 74
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+S L+ L + L+K ++ KNN+++RVIG+R + +I + +AE T NTG
Sbjct: 75 RPAEEVSFLMGLFLTALQKKIVNMHKNNMRLRVIGDRTRFNAEIQRSIDKAEQLTAQNTG 134
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L IA +Y R +I +A + + ++ + S +A L D P+PDL IRTG
Sbjct: 135 LTLTIAADYGGRWDILQAANALIAEGKTH------ISESDLASKLMLGDAPEPDLFIRTG 188
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE R+S+F+LWQ+AY+EF F WPDF+ AL + R+RRFG S++
Sbjct: 189 GETRISNFMLWQMAYAEFYFTDVLWPDFNESDMHQALLSFTQRERRFGRTSEQ 241
>gi|14591368|ref|NP_143446.1| hypothetical protein PH1590 [Pyrococcus horikoshii OT3]
gi|6136146|sp|O59258|UPPS_PYRHO RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|3258019|dbj|BAA30702.1| 264aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 264
Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats.
Identities = 88/240 (36%), Positives = 139/240 (57%), Gaps = 2/240 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + S P H+ IIMDGN RWA P GH G + EI+ E+GI+ LT+
Sbjct: 25 LIEKVKSGVLPKHVAIIMDGNRRWARKHEKPPWYGHLFGSKKLEEILEWCHELGIRILTV 84
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFS N++R E+ L+KL + ++ + + ++V VIG + L + ++
Sbjct: 85 YAFSTENFKRSKEEVDRLMKLFEEKFRELVTDKRVHEYGVRVNVIGRKELLPKSVRDAVE 144
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
EAE TR L +A Y R EI A+K+I +D+ SG + ++D L+ +YL +
Sbjct: 145 EAERATRKYNNYILNVALAYGGRSEIVDAVKDIARDVISGKLRIEEIDEELLRRYLYVPN 204
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+PDPD++IRTGGE R+S+FLL+Q+AYSE F+ Y+P+F + F + ++ R+RRFG
Sbjct: 205 MPDPDIVIRTGGEVRISNFLLYQIAYSELFFVDVYFPEFRKIDFLRIIREFQKRERRFGR 264
>gi|167770610|ref|ZP_02442663.1| hypothetical protein ANACOL_01956 [Anaerotruncus colihominis DSM
17241]
gi|167667205|gb|EDS11335.1| hypothetical protein ANACOL_01956 [Anaerotruncus colihominis DSM
17241]
Length = 242
Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats.
Identities = 104/237 (43%), Positives = 148/237 (62%), Gaps = 1/237 (0%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + S S P HIGII+DGNGRWA RGLPR AGHR+G + F +I E+G+K LT++A
Sbjct: 7 ADVPSGSMPAHIGIILDGNGRWAKKRGLPRSAGHRQGADTFGKIARHCREIGVKYLTVYA 66
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW+RP E+ L+ L++ +L Y + N ++R +G R L DI +++ E
Sbjct: 67 FSTENWKRPPDEVEALMDLLRRYL-TDTYKHRDENARLRFLGERGPLSSDIREMIERVEH 125
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
+ NT +N+ IA NY RDEI A + I + G++ ++ L ++ L T+ PDP
Sbjct: 126 DSAANTAINVNIALNYGGRDEIVHAARAIAKQCSEGTLDWKLINEHLFSETLYTAGQPDP 185
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DLIIR GE+R+S+FLLWQ AY+EFVF+ WPDF+ A+ + R+RRFGG+
Sbjct: 186 DLIIRPSGEQRISNFLLWQSAYAEFVFMDVLWPDFTPAHLDQAIRVFLSRNRRFGGV 242
>gi|294056527|ref|YP_003550185.1| undecaprenyl diphosphate synthase [Coraliomargarita akajimensis DSM
45221]
gi|293615860|gb|ADE56015.1| undecaprenyl diphosphate synthase [Coraliomargarita akajimensis DSM
45221]
Length = 246
Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats.
Identities = 104/242 (42%), Positives = 149/242 (61%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + +S+ P H+ IIMDGNGRWA RGLPR GHR+G + + AA ++G++ LT+
Sbjct: 1 MKPNSRASNSPRHVAIIMDGNGRWAQQRGLPRIEGHRRGADAVKRALKAAQQLGVEYLTL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS+ NW RP EI L++L+ FL LKK I++RV+G L + I L+ A
Sbjct: 61 YAFSVENWNRPKDEIDGLMRLLDRFLVDQLKELKKRKIRLRVVGRYQELPEHIQQRLRTA 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E +T + T L +A NY +R E+ A+K + IE+G C D++ + +++L T D+P
Sbjct: 121 EAETAMYTDHTLALALNYGARTELIDAVKAQYAAIEAGEQCIDDLNYTQFSQHLYTRDMP 180
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDLIIRT GE RLS+FLL Q AY+E +WPDFS F A+ Y+ R+RR+G
Sbjct: 181 DPDLIIRTSGECRLSNFLLLQAAYAEIHITDIFWPDFSESDFEAAIADYHSRERRYGKTG 240
Query: 241 KK 242
+
Sbjct: 241 AQ 242
>gi|307564740|ref|ZP_07627268.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella amnii CRIS
21A-A]
gi|307346462|gb|EFN91771.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella amnii CRIS
21A-A]
Length = 252
Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats.
Identities = 96/248 (38%), Positives = 147/248 (59%), Gaps = 8/248 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + + P+HI IIMDGNGRWA R PR GH+ G+E I ++G+K LT+
Sbjct: 1 MEEKIDMTRIPEHIAIIMDGNGRWAQRRNQPRTEGHKAGVETVRRITNICGKIGVKYLTL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW RP +EIS L+ L+ S L+ KN+ ++ VIG+ L ++ LK
Sbjct: 61 YTFSTENWNRPSNEISTLMGLVISSLEDEI--FMKNDARLLVIGDIGRLPSNVQLALKRT 118
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSH------DVDSSLIAKYL 174
+ T+ N L L +A +YS+R EI++A ++I +++ +V + + I+++L
Sbjct: 119 INNTKNNKRLTLVVALSYSARWEITKAAQDIACELQQKNVQLNADNIKTYITEETISQHL 178
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
T+ +PDPDL+IRTGGE R+S++LLWQ+AY+E F +WPDFS E + A+ + R R
Sbjct: 179 TTASIPDPDLLIRTGGEVRISNYLLWQIAYTELYFCNTFWPDFSEEDLYKAIANFQSRQR 238
Query: 235 RFGGLSKK 242
RFG +
Sbjct: 239 RFGKTGYQ 246
>gi|315230449|ref|YP_004070885.1| undecaprenyl pyrophosphate synthetase [Thermococcus barophilus MP]
gi|315183477|gb|ADT83662.1| undecaprenyl pyrophosphate synthetase [Thermococcus barophilus MP]
Length = 266
Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats.
Identities = 96/234 (41%), Positives = 136/234 (58%), Gaps = 2/234 (0%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ P H+ IIMDGN RWA P GH G + EI+ E+ IK LT++AFS
Sbjct: 33 NGRIPKHVAIIMDGNRRWARKLEKPPWYGHLFGSKKLEEILEWCRELNIKTLTVYAFSTE 92
Query: 67 NWRRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
N++R E++ L+ L + K+ + K I+V VIG R L +++ +EAE T
Sbjct: 93 NFKRSPEEVNALMNLFEQKFKELVHDERVHKYGIRVNVIGRRELLPENVRKAAEEAERAT 152
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
R + L IA Y R EI AIK I DIE G++ D+D L+ KYL ++PDPD+
Sbjct: 153 RKYSNYILNIALAYGGRSEIVDAIKRIVADIEDGNITKKDIDEELLKKYLYIPNMPDPDI 212
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+IRTGGE R+S+FLL+Q+AYSE F+ Y+P+F + F + +Y R+RRFG
Sbjct: 213 VIRTGGEIRISNFLLYQIAYSELFFVDVYFPEFRKIDFLRIIREYQKRERRFGK 266
>gi|288941762|ref|YP_003444002.1| undecaprenyl diphosphate synthase [Allochromatium vinosum DSM 180]
gi|288897134|gb|ADC62970.1| undecaprenyl diphosphate synthase [Allochromatium vinosum DSM 180]
Length = 263
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 100/234 (42%), Positives = 143/234 (61%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ IIMDGNGRWA RG PR AGHR+G++ +V + G++ LT+FAFS NW
Sbjct: 16 RVPRHVAIIMDGNGRWAKQRGRPRTAGHREGVKSVRAVVEESVRRGVETLTLFAFSSENW 75
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RRP +E++ L++L + L+ L +N + +RVIG R + + + + EAE T NT
Sbjct: 76 RRPRTEVNILMELFMTALRSEARRLNENGVCLRVIGERGAFPEKLQQRIAEAEALTADNT 135
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
LNL +A NY R +I +A++ + D+++G + +D +A L D+P+PDL IRT
Sbjct: 136 RLNLQVAANYGGRWDIVQAVRQLALDVQAGWLDPSQIDERRLADRLSFPDLPEPDLFIRT 195
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GGE+RLS+F+LWQ AYSE F WPDF + AL+ Y R RRFG +
Sbjct: 196 GGEQRLSNFVLWQSAYSELYFSDVLWPDFDAAAYGQALDDYARRQRRFGLTGDQ 249
>gi|268590527|ref|ZP_06124748.1| di-trans,poly-cis-decaprenylcistransferase [Providencia rettgeri
DSM 1131]
gi|291314113|gb|EFE54566.1| di-trans,poly-cis-decaprenylcistransferase [Providencia rettgeri
DSM 1131]
Length = 251
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 100/236 (42%), Positives = 145/236 (61%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
++ S P H+ IIMDGNGRWA RG R GH+ G+E V A + I +LT++A
Sbjct: 6 ENLSDSMMPKHVAIIMDGNGRWAKQRGKLRITGHKAGVESVRNSVRFAVKNKISSLTLYA 65
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP E+S L++L L +L KNN+K++VIG+ + + + +AE
Sbjct: 66 FSSENWRRPEKEVSSLMELFVFALDNEVKNLHKNNVKLKVIGDISRFSERLRKRIDKAEA 125
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T+ NTGL L IA NY R +IS ++K +F ++SG + D++ I ++ D +
Sbjct: 126 LTQNNTGLKLNIAANYGGRWDISNSVKQVFAKVQSGELSIDDINEESIDNHICMHDQENV 185
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DL+IRTGGE R+S+FLLWQVAY+EF F WPDF +F A++ ++ R+RR+GG
Sbjct: 186 DLVIRTGGEHRISNFLLWQVAYAEFYFTNVLWPDFDEMVFQSAVDAFSKRERRYGG 241
>gi|257470870|ref|ZP_05634960.1| undecaprenyl pyrophosphate synthetase [Fusobacterium ulcerans ATCC
49185]
gi|317065072|ref|ZP_07929557.1| undecaprenyl pyrophosphate synthetase [Fusobacterium ulcerans ATCC
49185]
gi|313690748|gb|EFS27583.1| undecaprenyl pyrophosphate synthetase [Fusobacterium ulcerans ATCC
49185]
Length = 230
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 102/235 (43%), Positives = 145/235 (61%), Gaps = 7/235 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M S P+HI IIMDGNGRWA RGLPR GH++G +I+ A ++G+K LT++AFS
Sbjct: 1 MESKIPNHIAIIMDGNGRWAEKRGLPRTLGHKEGANALRKIITYAGKIGVKYLTVYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+R E+ L+ L K++LK S+ KNN++ V G + + +L +K+ ED+++
Sbjct: 61 ENWKRSKDEVDALMFLFKTYLKNEEKSIMKNNVRFLVSGRKDDVSPSLLKAIKKLEDKSK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
NTGL L IAFNY R EI A+ +I ++ +KYL +++PDP+L+
Sbjct: 121 NNTGLTLNIAFNYGGRAEIVDAVNSIL------KSGIDNLAEEDFSKYLY-NNIPDPELL 173
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
+RT GE R+S+FLLWQ+AYSE WPDF + A+ YN RDRRFGG+
Sbjct: 174 VRTSGELRISNFLLWQIAYSEIYITDALWPDFDEKELDKAIESYNGRDRRFGGVK 228
>gi|206603800|gb|EDZ40280.1| Di-trans-poly-cis-decaprenylcistransferase [Leptospirillum sp.
Group II '5-way CG']
Length = 264
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 92/233 (39%), Positives = 140/233 (60%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+PP H+ IIMDGNGRWA R +PR GHR G IV A I LT++AFS NW
Sbjct: 25 NPPRHVAIIMDGNGRWARKRHMPRIVGHRAGATAVRTIVTATRSWEIPYLTLYAFSWENW 84
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+ L+ L++ ++ + ++ + I+ V+G+R L + + AE +T+ N
Sbjct: 85 SRPRQEVDALMGLLEEYIDREIRTMMEREIRFFVVGDRARLPSSVRSKIAWAERETKDNG 144
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+ L +A +YS R+EI RA++ + +D++ + + ++ ++YL+TS +P PDL+IRT
Sbjct: 145 RMVLTLALSYSGREEIVRAVQRLAEDVQKDRLDPDQISETVFSQYLETSILPPPDLLIRT 204
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
GE R+S+FLLWQ+AY+E F P WPDF E F A+ + R RRFG +
Sbjct: 205 SGEVRISNFLLWQLAYTEMYFTPTLWPDFREEDFRQAIEDFQERRRRFGKADE 257
>gi|116491009|ref|YP_810553.1| undecaprenyl pyrophosphate synthetase [Oenococcus oeni PSU-1]
gi|116091734|gb|ABJ56888.1| Undecaprenyl pyrophosphate synthetase [Oenococcus oeni PSU-1]
Length = 254
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 103/235 (43%), Positives = 136/235 (57%), Gaps = 3/235 (1%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P+H+ IIMDGNGRWA + R GH+ G++ I AA +G+K LT+FAFS NW
Sbjct: 19 LPEHVAIIMDGNGRWAKRQHKSRIFGHKAGMQNVETIALAANNLGVKVLTLFAFSTENWG 78
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E++ L+KL F L +NNIKV IG L + A + T+ NTG
Sbjct: 79 RPQDEVNYLMKLPIDFFNTFVPELIENNIKVEGIGEIDDLPEKTRQAFLNAVEDTKDNTG 138
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD---PDLII 186
L L A NY R EI A K+I + G + + D+D L L T+ + + PDLII
Sbjct: 139 LILNFAINYGGRTEIVDATKSIVNQVLQGKIKTEDIDEKLFQNNLLTNTLAEKANPDLII 198
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
RT GE+R+S+FLLWQ AYSEF F P+ WPD++ E AL Y+ RDRRFG + +
Sbjct: 199 RTSGEQRISNFLLWQSAYSEFYFSPKLWPDYTAEDLEEALAAYSNRDRRFGKIRE 253
>gi|170016986|ref|YP_001727905.1| undecaprenyl diphosphate synthase [Leuconostoc citreum KM20]
gi|169803843|gb|ACA82461.1| Undecaprenyl diphosphate synthase [Leuconostoc citreum KM20]
Length = 316
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 99/235 (42%), Positives = 136/235 (57%), Gaps = 3/235 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P+HI IIMDGNGRWA R +PR AGH+ G+ +I AA+++G+K LT++AFS NW
Sbjct: 73 KIPNHIAIIMDGNGRWAKKRLMPRVAGHKIGMNTVKKIATAASDLGVKVLTLYAFSTENW 132
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+S L+KL F + L KNNI+V V+GN L + + A QT T
Sbjct: 133 SRPNDEVSFLMKLPIDFFNEFVPDLIKNNIRVNVMGNIAQLPAETQRAVNRAIAQTAGGT 192
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT---SDVPDPDLI 185
G+ L A NY + EI K I + G + D+D+ L A L T ++ PDL+
Sbjct: 193 GMILNFALNYGGQIEIVSTAKKIATMVAEGLIKPEDIDAKLFADSLQTGTLGELAAPDLM 252
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IRT GE RLS+F+ +Q AY+E F WPD++ + A+ + RDRRFGGL+
Sbjct: 253 IRTSGELRLSNFMPYQSAYAELYFTNVLWPDYTADDLVEAIASFTARDRRFGGLN 307
>gi|225849451|ref|YP_002729616.1| di-trans,poly-cis-decaprenylcistransferase [Sulfurihydrogenibium
azorense Az-Fu1]
gi|225644497|gb|ACN99547.1| di-trans,poly-cis-decaprenylcistransferase [Sulfurihydrogenibium
azorense Az-Fu1]
Length = 234
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 94/239 (39%), Positives = 143/239 (59%), Gaps = 8/239 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M+ ++ P+H+ IIMDGNGRWA RGL R GH++G++ + + A +VGIK LT+
Sbjct: 1 MIENLYK--IPNHVAIIMDGNGRWAKRRGLDRVYGHKEGVKAVEKTIKFAKKVGIKYLTL 58
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW+RP+ E++ ++ L+ ++ + L +N++K+ +G R L D +L +++
Sbjct: 59 FAFSTENWQRPIDEVNTIMSLLVEYINEKIPMLLENDVKLIFMGRREGLWDSVLEAMEKG 118
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E +T + L + IA NYS + EI A+ I +D ++ ++P
Sbjct: 119 ERETSQCSSLTVVIALNYSGKAEILDAVNKIL------KSNVESIDEESFRQFFYRPEIP 172
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRT GEKR+S+FLLWQ+AY+E F WPDF E F AL Y R+RRFG +
Sbjct: 173 DPDLLIRTSGEKRISNFLLWQLAYTELYFTDVLWPDFDEEEFLKALYDYQSRERRFGKV 231
>gi|329114466|ref|ZP_08243228.1| Undecaprenyl pyrophosphate synthase [Acetobacter pomorum DM001]
gi|326696542|gb|EGE48221.1| Undecaprenyl pyrophosphate synthase [Acetobacter pomorum DM001]
Length = 246
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 100/233 (42%), Positives = 144/233 (61%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ P H+ +IMDGNGRWA RGLPR AGHR G E V AA + G+ LT++AFS
Sbjct: 8 KKPAIPTHVAVIMDGNGRWARERGLPRLAGHRAGAEAVARCVRAAMQRGVAYLTLYAFSS 67
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW R E+S+L L++ +L+ L K +++R IG+ DD + L +AE TR
Sbjct: 68 ENWARGQEEVSDLTGLLRYYLRHKVRELHKEGVRLRFIGDLARFDDSLREELAQAESLTR 127
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N+ L L +A +Y R +I +A + + Q+++ G + + S+ + +L TS VPDPD++
Sbjct: 128 GNSKLTLILALSYGGRLDIVQAAQRLAQEVKDGRIAPEQITESVFSNFLWTSGVPDPDVV 187
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+RT GE RLS+FLLWQ AY+E VF+ +WPDF+ F L+QY R+RRFG
Sbjct: 188 VRTSGECRLSNFLLWQSAYAELVFLNVFWPDFNERHFAMVLDQYAQRERRFGA 240
>gi|300715401|ref|YP_003740204.1| Undecaprenyl pyrophosphate synthetase [Erwinia billingiae Eb661]
gi|299061237|emb|CAX58346.1| Undecaprenyl pyrophosphate synthetase [Erwinia billingiae Eb661]
Length = 251
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 94/239 (39%), Positives = 141/239 (58%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P H+ IIMDGNGRWA RG R +GH+ G++ V+ A + LT++AFS
Sbjct: 12 LQEGENPRHVAIIMDGNGRWAKTRGKLRISGHKAGVKSVRRAVSFAVSNNLTALTLYAFS 71
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP E+ L++L L SL K+N+++R+IG+ D + ++ AE+ T
Sbjct: 72 SENWNRPPQEVMALMELFVWALDSEVKSLHKHNVRLRIIGDIGRFSDRLQERIRRAEELT 131
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ N GL L IA NY R +I ++ I + ++ G + ++ + +YL +++ DL
Sbjct: 132 QQNNGLTLNIAANYGGRWDIIHGVRKIAEQVQEGLIRPDQIEEETLGQYLCLNELAPVDL 191
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
+IRTGGE R+S+FLLWQVAY+EF F WPDF ++F ALN + R+RRFGG + G
Sbjct: 192 VIRTGGEHRISNFLLWQVAYAEFFFTDVLWPDFDEQVFEGALNAFAQRERRFGGAAPGG 250
>gi|308270380|emb|CBX26992.1| Undecaprenyl pyrophosphate synthetase [uncultured Desulfobacterium
sp.]
Length = 247
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 93/235 (39%), Positives = 132/235 (56%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ S + P HI IIMDGNGRWA R + R GH G IV A E+GI LT++AFS
Sbjct: 12 LDSLNLPKHIAIIMDGNGRWAEKRLMNRIKGHEAGSGAVRTIVRACREIGISVLTLYAFS 71
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP EIS L+ L+ FL+ + +N+I++ IG L +++ L D T
Sbjct: 72 TENWQRPKIEISALMVLLNKFLESEKNEMMENDIRLNAIGQVDKLPENVRKTLNRTMDLT 131
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N G+ L +A +Y R EI +K I Q ++ + + +A +L T+ +P PDL
Sbjct: 132 GKNKGMLLNLALSYGGRTEIVDMVKIISQKVKDSKIDPDLITDEFVADHLYTAGMPYPDL 191
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE R+S+FLLWQ+AYSE WPDF +E + + R+RRFG +
Sbjct: 192 LIRTSGEMRISNFLLWQIAYSEIFITDTLWPDFGKEELIKIIYDFQNRERRFGNV 246
>gi|325983650|ref|YP_004296052.1| undecaprenyl diphosphate synthase [Nitrosomonas sp. AL212]
gi|325533169|gb|ADZ27890.1| undecaprenyl diphosphate synthase [Nitrosomonas sp. AL212]
Length = 252
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 96/236 (40%), Positives = 135/236 (57%), Gaps = 2/236 (0%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ S P HI IIMDGNGRWA R +PR AGH++G+E ++ A E I LT+FAFS
Sbjct: 14 TGSIPKHIAIIMDGNGRWAKTRYMPRIAGHKQGVETVRGVIKACIERNIPYLTLFAFSSE 73
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E++ L++L L++ L +N I +VIG+ + I ++ E T
Sbjct: 74 NWRRPADEVTSLMQLFLGALEQEITRLHENGICFKVIGDLSKFEPKITEFIRIGEQLTAE 133
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N L IA NY R +I +A++ ++S + + +A+YL S P+PDL I
Sbjct: 134 NNRLTFTIAANYGGRWDIMQAMRK--MMMQSTEELPLNFEEENLAQYLALSYAPEPDLFI 191
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE R+S+FLLWQ+AY+E F WPDF A+ Y R+RRFG S++
Sbjct: 192 RTGGEYRISNFLLWQLAYTELYFTDTLWPDFDEHELERAIQSYQQRERRFGCTSEQ 247
>gi|311895949|dbj|BAJ28357.1| putative undecaprenyl diphosphate synthase [Kitasatospora setae
KM-6054]
Length = 275
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 91/235 (38%), Positives = 135/235 (57%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ S P H+ +MDGNGRWA RGLPR GH+ G V +++ E+G+KNL+++AF
Sbjct: 27 KIPSDLVPHHVACVMDGNGRWAKERGLPRTEGHKVGEGVVLDVLRGCLEIGVKNLSLYAF 86
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + +++ + I++R +G + ++ L+ A++Q
Sbjct: 87 STENWKRSPEEVKFLMNFNRDVIRRRRDEMDAMGIRIRWVGRMPRMWKSVVQELQVAQEQ 146
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N + L+ NY R EI+ A I +D+ +G + V+ L AKYL D+PD D
Sbjct: 147 TKGNDAMTLYFCVNYGGRAEIADAALAIARDVAAGKLNPEKVNEKLFAKYLYYPDMPDVD 206
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R GE+R S+FL WQ AY+E VF WPDF R + A QY RDRRFGG
Sbjct: 207 LFLRPSGEQRTSNFLAWQSAYAELVFQDVLWPDFDRRDLWRACEQYAHRDRRFGG 261
>gi|307729335|ref|YP_003906559.1| undecaprenyl diphosphate synthase [Burkholderia sp. CCGE1003]
gi|307583870|gb|ADN57268.1| undecaprenyl diphosphate synthase [Burkholderia sp. CCGE1003]
Length = 260
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 99/235 (42%), Positives = 143/235 (60%), Gaps = 1/235 (0%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
++ P HI IIMDGNGRWA R LPR AGH +G++ V A A G++ LT+FAFS N
Sbjct: 14 AAVPRHIAIIMDGNGRWATQRRLPRVAGHTRGVDAVRAAVEACARQGVEYLTLFAFSSEN 73
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+S L++L + L++ L N I++RV+G+ D I +++ AE +T N
Sbjct: 74 WRRPNDEVSFLMRLFVTALEREIGKLHANGIRLRVVGDLERFDTRIRDLIRRAETKTARN 133
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T L L IA NY R +I +A + + + +V+ +++L + P+PDL IR
Sbjct: 134 TRLTLTIAANYGGRWDIMQAT-RKLVEQAAQAGTPVEVNEETFSEHLSMAYAPEPDLFIR 192
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE+R+S+FLLWQ+AY+EF F +WPDF + A+ Y R+RRFG S +
Sbjct: 193 TGGERRVSNFLLWQLAYTEFYFTDTFWPDFDADALGRAIASYGERERRFGRTSAQ 247
>gi|209526838|ref|ZP_03275358.1| undecaprenyl diphosphate synthase [Arthrospira maxima CS-328]
gi|209492709|gb|EDZ93044.1| undecaprenyl diphosphate synthase [Arthrospira maxima CS-328]
Length = 253
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 94/239 (39%), Positives = 143/239 (59%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ A + + P+H+ +IMDGNGRWA RGLPR GHR+GI+ ++ + GI LT+
Sbjct: 11 LPADLDRNRLPNHVAVIMDGNGRWAKRRGLPRTMGHRRGIDALKNLLRYCRDWGINALTV 70
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP+ E+ L+ L + L + + + +++R +GN L + ++++
Sbjct: 71 YAFSTENWGRPLEEVDFLMALFERVLMRELEEMMEEEVRIRFVGNLHRLPGSLRECIEKS 130
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ TR N G+ L +A NY R+EI RA + I ++ G++ +D +L KYL T+
Sbjct: 131 METTRNNEGILLTVATNYGGREEIVRACQAIANQVKQGTLEPEAIDGALFEKYLYTAGTS 190
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRT GE R+S+FLLWQ+AY+E WPDF+ F AL Y R+RRFG +
Sbjct: 191 DPDLLIRTSGELRISNFLLWQIAYAEIYVTETLWPDFNSHEFHLALCSYQQRERRFGKV 249
>gi|332157818|ref|YP_004423097.1| hypothetical protein PNA2_0175 [Pyrococcus sp. NA2]
gi|331033281|gb|AEC51093.1| hypothetical protein PNA2_0175 [Pyrococcus sp. NA2]
Length = 264
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 90/240 (37%), Positives = 138/240 (57%), Gaps = 2/240 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + S P H+ IIMDGN RWA P GH G + EI+ E+GI+ LT+
Sbjct: 25 LIEKVRSGVLPKHVAIIMDGNRRWARKYDKPPWYGHFFGSKKLEEILEWCHELGIRILTV 84
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFS N++R E+ +L++L + ++ + + I+V VIG + L + +
Sbjct: 85 YAFSTENFKRSKEEVEKLMELFERKFRELVSDKRVHEYGIRVNVIGRKELLPKSVRDAAE 144
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
EAE TR L +A Y R EI A+K+I +D+ G + D+D L+ KYL +
Sbjct: 145 EAERVTRKYNNYILNVALAYGGRSEIVDAVKDIVRDVMEGKIKVEDIDEELLKKYLYVPN 204
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+PDPD++IRTGGE R+S+FLL+Q+AYSE F+ Y+P+F + F + +Y R+RRFG
Sbjct: 205 MPDPDIVIRTGGEVRISNFLLYQIAYSELFFVDVYFPEFRKIDFLRIIREYQKRERRFGR 264
>gi|237747789|ref|ZP_04578269.1| undecaprenyl pyrophosphate synthetase [Oxalobacter formigenes
OXCC13]
gi|229379151|gb|EEO29242.1| undecaprenyl pyrophosphate synthetase [Oxalobacter formigenes
OXCC13]
Length = 247
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 95/233 (40%), Positives = 134/233 (57%), Gaps = 4/233 (1%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI I+MDGNGRWA R LPR AGH KG+E + I LT+FAFS NW+
Sbjct: 16 MPQHIAIVMDGNGRWAKKRFLPRVAGHVKGVEAIRRTIEGCIVRNIPYLTVFAFSSENWK 75
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+S L+ L S L+K L N+I+++V+G+ D + + AE++T N+
Sbjct: 76 RPGEEVSFLMNLFLSSLEKETDKLHDNDIRLKVVGDLSRFDVPLQKAITVAEEKTSKNST 135
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L + NY R +I +A + + + + D+ ++ YL S P+PDL IRTG
Sbjct: 136 LTLTVCANYGGRWDILQAARRMSSE----GLDVKDMTEERLSSYLALSYAPEPDLFIRTG 191
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE R+S+FLLWQ+AYSE F +WPDF E A+ + R+RRFG S++
Sbjct: 192 GETRISNFLLWQLAYSELYFTETFWPDFDNEELEKAIASFQSRERRFGKTSEQ 244
>gi|262340875|ref|YP_003283730.1| di-trans,poly-cis-decaprenylcistransferase [Blattabacterium sp.
(Blattella germanica) str. Bge]
gi|262272212|gb|ACY40120.1| di-trans,poly-cis-decaprenylcistransferase [Blattabacterium sp.
(Blattella germanica) str. Bge]
Length = 247
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 95/240 (39%), Positives = 138/240 (57%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + ++ P H+ IIMDGNGRWA RG R GH K + + + E+GI +T+
Sbjct: 8 LLKEIDYNNIPHHVAIIMDGNGRWAEKRGKLRTFGHEKAMLSVRDTINGCKELGIPYVTL 67
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW RP EI++L++L + LK + + N+K+ IG + I L
Sbjct: 68 YVFSSENWNRPKKEINDLMRLFHTNLKIHLEEIHEKNVKIITIGEIERFSEMIQKELSFF 127
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+T NT L +A +YS+R+EI RA KNI + + G + D++ S +L T D+P
Sbjct: 128 IKKTEHNTSGTLILALSYSAREEILRATKNIAKKVCDGFLSLRDINDSFFKNHLYTKDLP 187
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
D DLIIRT GE+R+S+FLLWQ AY+E F WPDF ++ FF A+ Y R RRFG +
Sbjct: 188 DVDLIIRTSGEQRISNFLLWQSAYAELYFTNILWPDFRKKDFFEAIINYQKRKRRFGNVE 247
>gi|256809986|ref|YP_003127355.1| undecaprenyl diphosphate synthase [Methanocaldococcus fervens AG86]
gi|256793186|gb|ACV23855.1| undecaprenyl diphosphate synthase [Methanocaldococcus fervens AG86]
Length = 277
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 91/241 (37%), Positives = 140/241 (58%), Gaps = 4/241 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ S+ ++ P H+ IIMDGN R A R GH G E +++ A ++GIK +T+
Sbjct: 36 LEESIDKNNLPKHVAIIMDGNRRAAEIYEKDRYYGHYLGAEKVKDVLRWARDLGIKVVTL 95
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFS N++RP E+ +L++L + + + K ++VR IG L ++ +K
Sbjct: 96 YAFSTENFKRPKEEVEKLMELFEKKFYEIADDEEVHKYKVRVRAIGRINLLPKNVQKAIK 155
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
AED+T+ + + +A Y + EI A+K I + ++ G V D+D LI K+L T+D
Sbjct: 156 YAEDKTKNYSEFFINVAIAYGGQQEIIDAVKKIAEKVKKGEVKPEDIDKELIDKHLYTAD 215
Query: 179 V--PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
+ P+PDLIIRT GE+R+S+FL+WQ +YSE F YWP F R F A+ +Y R RRF
Sbjct: 216 LPFPNPDLIIRTSGEERISNFLIWQSSYSELYFCDIYWPLFRRVDFLRAIREYQRRHRRF 275
Query: 237 G 237
G
Sbjct: 276 G 276
>gi|70728562|ref|YP_258311.1| undecaprenyl diphosphate synthase [Pseudomonas fluorescens Pf-5]
gi|68342861|gb|AAY90467.1| undecaprenyl diphosphate synthase [Pseudomonas fluorescens Pf-5]
Length = 251
Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats.
Identities = 96/235 (40%), Positives = 143/235 (60%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
SS P H+ IIMDGN RWA R +P AGH+ G++ ++ AE ++ LT+FAFS N
Sbjct: 10 SSVPRHVAIIMDGNNRWAKKRFMPGVAGHKAGVDAVRAVIEVCAEAKVEVLTLFAFSSEN 69
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W+RP E+S L+ L L++ L +NNI +R+IG+R ++ ++EAE T +
Sbjct: 70 WQRPADEVSALMDLFFKALRREAKRLNENNISLRIIGDRSRFHPELQAAMREAEAITAGS 129
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L IA NY + +I++A + + +++++G + D+ L+ L T D+P PDL IR
Sbjct: 130 DRFILQIAANYGGQWDIAQAAQRLAREVQAGHLRPEDITPGLLQTCLATGDLPLPDLCIR 189
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE R+S+FLLWQ+AY+E F +WPDF E +AL Y R RRFG S++
Sbjct: 190 TGGEHRISNFLLWQLAYAELYFSDLFWPDFKHEAMRNALADYASRQRRFGKTSEQ 244
>gi|291567169|dbj|BAI89441.1| undecaprenyl pyrophosphate synthetase [Arthrospira platensis
NIES-39]
Length = 253
Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats.
Identities = 93/239 (38%), Positives = 142/239 (59%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ A + + P+H+ +IMDGNGRWA RGLPR GHR+GI+ ++ + GI LT+
Sbjct: 11 LPADLDRNRLPNHVAVIMDGNGRWAKRRGLPRTMGHRRGIDALKNLLRYCRDWGINALTV 70
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP+ E+ L+ L + L + + + +++R +GN L + ++++
Sbjct: 71 YAFSTENWGRPLEEVDFLMALFERVLMRELEEMMEEEVRIRFVGNLHRLPASLRECIEKS 130
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ TR N G+ +A NY R+EI RA + I ++ G++ +D +L KYL T+
Sbjct: 131 METTRNNEGILFTVATNYGGREEIVRACQAIANQVKQGTLEPEAIDGALFEKYLYTAGTC 190
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRT GE R+S+FLLWQ+AY+E WPDF+ F AL Y R+RRFG +
Sbjct: 191 DPDLLIRTSGELRISNFLLWQIAYAEIYVTDTLWPDFNSHEFHLALCSYQQRERRFGKV 249
>gi|148255866|ref|YP_001240451.1| undecaprenyl pyrophosphate synthase [Bradyrhizobium sp. BTAi1]
gi|146408039|gb|ABQ36545.1| Undecaprenyl pyrophosphate synthetase [Bradyrhizobium sp. BTAi1]
Length = 251
Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats.
Identities = 119/232 (51%), Positives = 161/232 (69%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWAAARGLPR GHR+G+E +V A+ E+GI+ LTIF+FS NW R
Sbjct: 17 PAHVAIIMDGNGRWAAARGLPRAEGHRRGVEALRRVVRASHELGIRYLTIFSFSSENWSR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SEI +L L++ F++ +L ++ ++VRVIG R L+ DI +L EAE+ TR NT L
Sbjct: 77 PASEIGDLFGLLRRFIRNDLATLHRDGVRVRVIGERDGLEPDICALLSEAEELTRGNTKL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +AFNY SR EI+RA + + +++ G +D+ I +LD D+PDPDLIIRT G
Sbjct: 137 TLVVAFNYGSRQEIARAAQRLAREVAEGRRDPASIDADAIGAHLDAPDIPDPDLIIRTSG 196
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+RLS+FL+WQ AYSE VF+P +WPDF + A+ ++ R+RRFGGL K
Sbjct: 197 EQRLSNFLMWQAAYSELVFVPMHWPDFDKAALEGAIAEFGRRERRFGGLVAK 248
>gi|114562452|ref|YP_749965.1| undecaprenyl diphosphate synthase [Shewanella frigidimarina NCIMB
400]
gi|114333745|gb|ABI71127.1| Undecaprenyl pyrophosphate synthetase [Shewanella frigidimarina
NCIMB 400]
Length = 274
Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats.
Identities = 91/241 (37%), Positives = 146/241 (60%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
++ ++ S P H+ IIMDGNGRWA +G R GH+ G++ V+ A+++GI++LT+F
Sbjct: 27 LSDVVKQSLPKHVAIIMDGNGRWAQLQGKARVFGHKAGVKAVRRAVSTASQLGIESLTLF 86
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP E+S L++L + L++ L KN +K+ +IG+ + + + A+
Sbjct: 87 AFSSENWRRPDKEVSLLMELFFTVLQRELKLLDKNQVKLNIIGDTSRFSNRLQKQIAGAQ 146
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T NTGL L +A NY R +I +A + + + +ESG + S + + ++L + +
Sbjct: 147 EKTASNTGLILNVAANYGGRWDILQAAQKLAEKVESGEITSSQMTEEALNEHLCMQNQSE 206
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRTGG+ R+S+F+LWQ AY+E VF WPDF F A+ + R RRFG
Sbjct: 207 VDLMIRTGGDYRISNFVLWQAAYAELVFTDTLWPDFDELAFRDAIAIFASRQRRFGLTGS 266
Query: 242 K 242
+
Sbjct: 267 Q 267
>gi|332160597|ref|YP_004297174.1| undecaprenyl pyrophosphate synthetase [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
gi|318606925|emb|CBY28423.1| undecaprenyl pyrophosphate synthetase [Yersinia enterocolitica
subsp. palearctica Y11]
gi|325664827|gb|ADZ41471.1| undecaprenyl pyrophosphate synthetase [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
gi|330859604|emb|CBX69944.1| undecaprenyl pyrophosphate synthetase [Yersinia enterocolitica
W22703]
Length = 252
Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats.
Identities = 88/230 (38%), Positives = 136/230 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R GH+ G++ V+ AA + LT++AFS NW R
Sbjct: 16 PRHVAIIMDGNGRWAKKQGKLRVFGHKAGVKSVRRAVSFAATHQLDALTLYAFSSENWNR 75
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L++L L SL K+N+++ VIG+ + + ++ +E+ T N GL
Sbjct: 76 PAQEVTALMELFVRALDSEVKSLHKHNVRLSVIGDISRFSERLQQRIRRSEELTANNYGL 135
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I + ++++ + ++ G + D+ + Y+ + + DL+IRTGG
Sbjct: 136 KLNIAANYGGRWDIIQGVRHLAEQVQRGELQPKDICEESLNSYICLHEQSEVDLVIRTGG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E R+S+FLLWQ+AY+E F WPDF +F ALN + R+RRFGG +
Sbjct: 196 EHRISNFLLWQIAYAELYFTDVLWPDFDEHVFEGALNAFAQRERRFGGTT 245
>gi|183597592|ref|ZP_02959085.1| hypothetical protein PROSTU_00874 [Providencia stuartii ATCC 25827]
gi|188023088|gb|EDU61128.1| hypothetical protein PROSTU_00874 [Providencia stuartii ATCC 25827]
Length = 250
Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats.
Identities = 101/236 (42%), Positives = 147/236 (62%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
++ S+ P H+ IIMDGNGRWA RG R GH+ G+E V A + I +LT++A
Sbjct: 6 ENLSHSALPKHVAIIMDGNGRWAKQRGKLRITGHKAGVESVRNAVRFAVKNKISSLTLYA 65
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP E+S L++L L +L KNN+K+ VIG+ + + +++AE
Sbjct: 66 FSSENWRRPEKEVSSLMELFVFALDNEVKNLHKNNVKLLVIGDISRFSERLQKRIQKAEK 125
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTGL L IA NY R +I+ ++K IF ++SG + D++ + I Y+ D +
Sbjct: 126 LTANNTGLKLNIAANYGGRWDIANSMKQIFARVQSGQLSLDDINENTIDHYVCMHDQENV 185
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DL+IRTGGE R+S+FLLWQVAY+EF F WPDF +F +A++ ++ R+RR+GG
Sbjct: 186 DLVIRTGGEHRISNFLLWQVAYAEFYFTNVLWPDFDEMVFQNAIDAFSQRERRYGG 241
>gi|89075416|ref|ZP_01161833.1| putative undecaprenyl diphosphate synthase [Photobacterium sp.
SKA34]
gi|89048832|gb|EAR54402.1| putative undecaprenyl diphosphate synthase [Photobacterium sp.
SKA34]
Length = 253
Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats.
Identities = 97/240 (40%), Positives = 141/240 (58%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + + P+HI +IMDGNGRWA A+G R GH+ G+E + V+ A +GIK LT+FA
Sbjct: 8 AGLSADCLPNHIAVIMDGNGRWAKAKGKARVFGHKAGVEAVRKTVSTANRLGIKALTLFA 67
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP +E+S L++L + L + L KNNI++R+IG++ + + AE
Sbjct: 68 FSSENWRRPEAEVSLLMELFMTVLSREVKRLHKNNIQLRIIGDKRRFSQRLQDKISAAEK 127
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTG+ L IA NY + +I A K + Q + V + L T +P+
Sbjct: 128 LTADNTGMVLNIAANYGGQWDILEAAKKLAQHAIDNELDLATVTEQDLESGLSTYGLPEV 187
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL+IRT GE R+S+F+LWQ AY+E F E+WPDF F +A+ + R+RRFG ++
Sbjct: 188 DLLIRTSGECRISNFMLWQTAYAELFFTEEHWPDFDESSFLNAVAWFVTRERRFGCTGEQ 247
>gi|326779463|ref|ZP_08238728.1| undecaprenyl diphosphate synthase [Streptomyces cf. griseus
XylebKG-1]
gi|326659796|gb|EGE44642.1| undecaprenyl diphosphate synthase [Streptomyces cf. griseus
XylebKG-1]
Length = 281
Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats.
Identities = 88/235 (37%), Positives = 136/235 (57%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P H+ ++MDGNGRWA RGLPR GH+ G V +++ E+G+KNL+++AF
Sbjct: 29 KIPGELVPQHVAVVMDGNGRWAKERGLPRTEGHKVGEGVVMDVLKGCIEMGVKNLSLYAF 88
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + +++ + + I++R +G L ++ L+ A++Q
Sbjct: 89 STENWKRSPDEVKFLMNFNRDVIRRRRDEMDELGIRIRWVGRMPKLWKSVVQELQVAQEQ 148
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N + L+ NY R EI+ A + I QD+ +G + V+ AKY D+PD D
Sbjct: 149 TKDNDRMTLYFCVNYGGRAEIADAAQRIAQDVAAGRLDPSKVNEKTFAKYTYYPDMPDVD 208
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R GE+R S++L+WQ AY+E VF WPDF R + A +Y RDRRFGG
Sbjct: 209 LFVRPSGEQRTSNYLIWQSAYAEMVFQDVLWPDFDRRDLWRACLEYAQRDRRFGG 263
>gi|260433806|ref|ZP_05787777.1| undecaprenyl pyrophosphate synthetase 1 [Silicibacter
lacuscaerulensis ITI-1157]
gi|260417634|gb|EEX10893.1| undecaprenyl pyrophosphate synthetase 1 [Silicibacter
lacuscaerulensis ITI-1157]
Length = 243
Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats.
Identities = 106/236 (44%), Positives = 146/236 (61%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ S P H+ IIMDGNGRWA ARG PR GH G E+V A +GIK LTIFAFS
Sbjct: 8 VQSRGPRHVAIIMDGNGRWAQARGRPRLYGHHAGARRVREVVEACPSLGIKYLTIFAFST 67
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+R E++ L+ L + ++ K +L + ++VR IG+R+ LD ++ ++ E +T
Sbjct: 68 ENWKRTQVEVAGLMSLFRRYIVKEARNLAASGVRVRFIGDRVRLDAKLVELMDMLEAETA 127
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N G++L IA NY RDE++RA K + +D+ G + DVD + KYLDT +PDPDL+
Sbjct: 128 GNDGVHLTIALNYGGRDEVARATKRLARDVAEGRLRPEDVDEETLPKYLDTRVLPDPDLV 187
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
IRT GE R+S+FLLWQ AYSE+ F+ WPDF+ Y R+RRFG +
Sbjct: 188 IRTSGEARISNFLLWQSAYSEYEFVDTLWPDFTAAELELLCKSYGSRERRFGAVPA 243
>gi|228966768|ref|ZP_04127812.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228792867|gb|EEM40425.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar sotto str. T04001]
Length = 222
Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats.
Identities = 101/222 (45%), Positives = 146/222 (65%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA R +PR AGH +G++V +I A+++ +K LT++AFS NW+RP E+
Sbjct: 1 MDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLNVKVLTLYAFSTENWKRPKKEVDY 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+KL + FL L + N++VRVIG + L +++A + T+ NTGL L A N
Sbjct: 61 LMKLPEEFLGTFLPELIEENVQVRVIGQKDRLPTHTRRAMEKAMEDTKENTGLILNFALN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y SRDEI A++++ +D E G + S +V +++ YL TS +PDP+L+IRT GE R+S+F
Sbjct: 121 YGSRDEIVSAVQHMMKDNEEGKIRSEEVSEEMLSSYLMTSSLPDPELLIRTSGELRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+LWQ+AYSEF F YWPDF E +A+ + R RRFGG+
Sbjct: 181 MLWQIAYSEFWFTDVYWPDFKEEHLLNAITDFQHRGRRFGGV 222
>gi|89901451|ref|YP_523922.1| undecaprenyl diphosphate synthase [Rhodoferax ferrireducens T118]
gi|89346188|gb|ABD70391.1| Undecaprenyl pyrophosphate synthetase [Rhodoferax ferrireducens
T118]
Length = 242
Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 92/235 (39%), Positives = 138/235 (58%), Gaps = 2/235 (0%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
SS P HI +IMDGN RWA GLP GH G IV A AE G++ LT+FAFS
Sbjct: 9 SSPVPQHIAVIMDGNRRWAKQHGLPVALGHANGARQVRRIVQACAERGVRYLTLFAFSTE 68
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+S L+ L+ +L+K ++ ++++++G+ I ++ +A+++T
Sbjct: 69 NWRRPQDEVSSLMGLMTLYLQKEVKNMSAKGVRLKIVGDISGFSARIQELILQAQEKTAH 128
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N + L IA NY R ++ A+K+ + +D + ++++L S PDPDL+I
Sbjct: 129 NDTITLTIAANYGGRWDMVEAVKS--WQTAHPGESVNGIDEAALSEHLGLSYAPDPDLLI 186
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
RTGGE R+S+F+LWQ+AY+E F WP F+ + AL Y R+RRFGG +K
Sbjct: 187 RTGGESRISNFMLWQLAYTELFFTDALWPSFTPDELDRALTWYGTRERRFGGSTK 241
>gi|126696537|ref|YP_001091423.1| undecaprenyl pyrophosphate synthetase [Prochlorococcus marinus str.
MIT 9301]
gi|126543580|gb|ABO17822.1| Undecaprenyl pyrophosphate synthetase (UPPS) [Prochlorococcus
marinus str. MIT 9301]
Length = 267
Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 88/240 (36%), Positives = 134/240 (55%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + P H+ IIMDGNGRWA +GLPR GH++G+ V +I+ AA ++G K +T+
Sbjct: 14 LLMKIDKQKLPKHVAIIMDGNGRWATRKGLPRSFGHKQGVSVLKKILKAAKKLGCKVITV 73
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP E+ L+ L LK + + + K++ IG+ ++ ++ +
Sbjct: 74 YAFSTENWTRPSKEVDFLINLFSEVLKNEIDEIHEESTKIKFIGDLTPFPKNLKEIISSS 133
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E T+ N + NY R EI + K + SG + +++ L L T +
Sbjct: 134 ESLTKNNNKFLFNVCVNYGGRQEIVKVAKELALKSSSGKIKPSEINEELFNSELLTRGIK 193
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DP+L+IRT GEKR+S+FLLWQ+AYSE WPDF+ F A+ Y R+RRFGG+
Sbjct: 194 DPELLIRTSGEKRISNFLLWQLAYSEIYISEVLWPDFNEHEFLKAIIDYQSRNRRFGGIE 253
>gi|295676821|ref|YP_003605345.1| undecaprenyl diphosphate synthase [Burkholderia sp. CCGE1002]
gi|295436664|gb|ADG15834.1| undecaprenyl diphosphate synthase [Burkholderia sp. CCGE1002]
Length = 260
Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 104/235 (44%), Positives = 144/235 (61%), Gaps = 1/235 (0%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
++ P HI IIMDGNGRWA R LPR AGH +G++ V A A G++ LT+FAFS N
Sbjct: 14 AAVPRHIAIIMDGNGRWATQRRLPRVAGHTRGVDAVRAAVEACARRGVEYLTLFAFSSEN 73
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+S L++L + L++ L N I++RV+G+ DD I ++K AE +T N
Sbjct: 74 WRRPNEEVSFLMRLFVTALEREIGKLHANGIRLRVVGDLERFDDKIRDLIKRAETKTARN 133
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T L L IA NY R +I +A + + + DV A++L + P+PDL IR
Sbjct: 134 TRLTLTIAANYGGRWDIMQATRKLVAQAAAAGQ-PVDVSEDSFAEHLSMAYAPEPDLFIR 192
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE+R+S+FLLWQ+AY+EF F +WPDF + HA+ Y R+RRFG S +
Sbjct: 193 TGGERRVSNFLLWQLAYTEFYFTDTFWPDFDADALGHAIASYAERERRFGRTSAQ 247
>gi|94500626|ref|ZP_01307156.1| undecaprenyl diphosphate synthase [Oceanobacter sp. RED65]
gi|94427181|gb|EAT12161.1| undecaprenyl diphosphate synthase [Oceanobacter sp. RED65]
Length = 252
Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 94/235 (40%), Positives = 143/235 (60%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
P H+ I+MDGN RWA R LP AGH+ G++ ++ +A +G++ LT+FAFS N
Sbjct: 10 EKLPQHVAIVMDGNNRWAKRRHLPGVAGHKAGVKAVKTVIEQSARLGVEALTLFAFSSEN 69
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W+RP E++ L++L + L+K L +++I++ +IG+ D + + EAE T N
Sbjct: 70 WQRPEKEVNALMQLFLNALQKEVSKLHEHDIRLIIIGDTSRFSDTLQKHITEAEALTANN 129
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
GL L IA NY R +++ A I ++ G + +++ L +Y SD+P PDL IR
Sbjct: 130 QGLKLVIAANYGGRWDMANAAYKIACKVKQGELSENEITPELFHQYTSLSDLPSPDLCIR 189
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE RLS+F+LWQ AY+E VF WPDF+ + F+ A+ +YN R RRFG ++
Sbjct: 190 TGGEVRLSNFMLWQFAYTELVFSDALWPDFNEQDFWSAITEYNSRTRRFGRTDEQ 244
>gi|257453212|ref|ZP_05618511.1| undecaprenyl pyrophosphate synthetase [Fusobacterium sp. 3_1_5R]
gi|257467198|ref|ZP_05631509.1| undecaprenyl pyrophosphate synthetase [Fusobacterium gonidiaformans
ATCC 25563]
gi|315918328|ref|ZP_07914568.1| undecaprenyl pyrophosphate synthetase [Fusobacterium gonidiaformans
ATCC 25563]
gi|317059746|ref|ZP_07924231.1| undecaprenyl pyrophosphate synthetase [Fusobacterium sp. 3_1_5R]
gi|313685422|gb|EFS22257.1| undecaprenyl pyrophosphate synthetase [Fusobacterium sp. 3_1_5R]
gi|313692203|gb|EFS29038.1| undecaprenyl pyrophosphate synthetase [Fusobacterium gonidiaformans
ATCC 25563]
Length = 230
Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 100/237 (42%), Positives = 141/237 (59%), Gaps = 7/237 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
MS P HI IIMDGNGRWA R LPR GHR+G + +I+ A E+GI+ LT++AFS
Sbjct: 1 MSIEVPKHIAIIMDGNGRWAKKRALPRTLGHREGAKTLQKILKYAGELGIQYLTVYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW R E+S L+KL ++K +L KNN++ V G + + +L +K E++T
Sbjct: 61 ENWNRSEEEVSALMKLFSKYIKNEEKNLMKNNVRFLVSGRKERVSSSLLEEIKALEEKTS 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
NTG+ IAFNY R EI A+ + Q+ + + I+ +L ++PDP+LI
Sbjct: 121 RNTGITFNIAFNYGGRAEIVDAVNQLLQEKK------EKISEEDISSHLY-QNIPDPELI 173
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRT GE R+S+FLLWQ+AY+E WPDF + AL + R+RRFGG+ +K
Sbjct: 174 IRTSGEFRISNFLLWQLAYAEIYVTDTLWPDFDEKSLDLALENFQKRERRFGGVYEK 230
>gi|209518712|ref|ZP_03267528.1| undecaprenyl diphosphate synthase [Burkholderia sp. H160]
gi|209500826|gb|EEA00866.1| undecaprenyl diphosphate synthase [Burkholderia sp. H160]
Length = 260
Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 103/235 (43%), Positives = 146/235 (62%), Gaps = 1/235 (0%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
++ P HI IIMDGNGRWA R LPR AGH +G++ V A A G++ LT+FAFS N
Sbjct: 14 AAVPRHIAIIMDGNGRWATQRRLPRVAGHTRGVDAVRAAVEACARRGVEYLTLFAFSSEN 73
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+S L++L + L++ L N I++RV+G+ DD I ++K AE +T N
Sbjct: 74 WRRPNEEVSFLMRLFVTALEREIGKLHANGIRLRVVGDLERFDDKIRDLIKRAETKTARN 133
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T L L IA NY R +I +A + + + + +V+ A++L + P+PDL IR
Sbjct: 134 TRLTLTIAANYGGRWDIMQATRKLVEQSAAAG-KPVEVNEDSFAEHLSMAYAPEPDLFIR 192
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE+R+S+FLLWQ+AY+EF F +WPDF + HA+ Y R+RRFG S +
Sbjct: 193 TGGERRVSNFLLWQLAYTEFYFTDTFWPDFDADALGHAIASYAERERRFGRTSAQ 247
>gi|53805187|ref|YP_113090.1| undecaprenyl diphosphate synthase [Methylococcus capsulatus str.
Bath]
gi|53758948|gb|AAU93239.1| undecaprenyl diphosphate synthase [Methylococcus capsulatus str.
Bath]
Length = 262
Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 98/237 (41%), Positives = 143/237 (60%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
P H+ I+MDGNGRWA R LPR AGHR G+ ++V A+ G++ LT+FAFS
Sbjct: 20 RMRRIPRHVAIVMDGNGRWAQERYLPRTAGHRAGVGAVRKVVEHCAKRGVEALTLFAFSS 79
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NWRRP E+S L++L S L++ L +N +++R+IG+R + + + + AE TR
Sbjct: 80 ENWRRPEQEVSVLMELFLSTLERETEKLHQNGVRLRIIGDRAAFGEALRERMDAAESLTR 139
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
NTGL L IA NY R +I +A + + + + G + + + + + L +D+P+PDL
Sbjct: 140 SNTGLQLAIAANYGGRWDIVQAAQTLAEKVRRGELSPEQITADRLQQQLALADLPEPDLF 199
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTGGE+R+S+FLLWQ+AY+E F P WP+F E A Y R RRFG +
Sbjct: 200 IRTGGERRISNFLLWQLAYTELYFTPVLWPEFDEEALDLAFEDYAGRQRRFGFTGDQ 256
>gi|291166150|gb|EFE28196.1| di-trans,poly-cis-decaprenylcistransferase [Filifactor alocis ATCC
35896]
Length = 240
Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 101/240 (42%), Positives = 146/240 (60%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M+ + P H+GIIMDGNGRWA R +PR GH++G+E +I + +GIK LT+
Sbjct: 1 MLDQLDREYMPTHVGIIMDGNGRWAKKRMMPRNFGHKQGVETLKKITEECSNLGIKYLTV 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+R EIS ++ L+ +L K +L + N+K+ IG+ L L E+
Sbjct: 61 YAFSTENWKRSGLEISGIMNLLVDYLAKELRNLHEKNVKLMTIGDIEKLPKAAYNKLVES 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
++ T+ NTGL L +A NY SR +IS AIK I + VD + + +LDT+ +P
Sbjct: 121 KEFTKDNTGLVLTVALNYGSRRDISHAIKKIILSDRESPIDLDKVDDTFLRDFLDTAFLP 180
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDLIIR GE+RLS+FL+W+ AY+EF + WPDF +E AL+ + R+RR+GG
Sbjct: 181 DPDLIIRPSGEQRLSNFLMWEAAYTEFWYSDINWPDFKKEDLHRALHDFQNRNRRYGGTK 240
>gi|152995305|ref|YP_001340140.1| undecaprenyl diphosphate synthase [Marinomonas sp. MWYL1]
gi|150836229|gb|ABR70205.1| undecaprenyl diphosphate synthase [Marinomonas sp. MWYL1]
Length = 243
Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 101/228 (44%), Positives = 142/228 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGN RWA + LP AGH G +V AAA+ G+K LT+FAFS NW+R
Sbjct: 15 PAHIAIIMDGNNRWAKKKHLPSIAGHTAGAAAVRRVVEAAAKSGVKVLTLFAFSSENWKR 74
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L LKK L ++ I++RV+G+ + +K ED T+ N +
Sbjct: 75 PKLEVDGLMTLFMRSLKKELKRLNEHKIRLRVVGDLSGFSGGLQKQIKSVEDATKNNEQM 134
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I++A K + + + G + D+D L+ K+++ +D+P PDL+IRT G
Sbjct: 135 TLVIAANYGGRWDIAQAAKAVAKRVALGELSVEDIDEVLLGKHMELADLPPPDLLIRTSG 194
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R+S+FLLWQ AYSEFVF+P WPDF ++ F A+ Y R RR+GG
Sbjct: 195 EERISNFLLWQTAYSEFVFLPVLWPDFDQQHFDEAVQTYQKRQRRYGG 242
>gi|302342181|ref|YP_003806710.1| undecaprenyl diphosphate synthase [Desulfarculus baarsii DSM 2075]
gi|301638794|gb|ADK84116.1| undecaprenyl diphosphate synthase [Desulfarculus baarsii DSM 2075]
Length = 259
Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 90/242 (37%), Positives = 136/242 (56%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + SS P H+ +IMDGNGRWA +GLPR GH G E +V +G++ LT+
Sbjct: 10 LESRLDKSSLPRHVAVIMDGNGRWAQRQGLPRVRGHEAGAESVRAVVRTCRRLGVEALTL 69
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP +E++ L KL+ FLK+ + I++ IG+ L L++
Sbjct: 70 YAFSEENWARPKAEVAALWKLLGRFLKQERAEMLAQGIRLNAIGSLHKLPTATAQALRKV 129
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
T + L +A +Y R E++ A + + + +G + DVD + +A L T D+P
Sbjct: 130 MADTAGGRQMVLTLALSYGGRQELTEAAHRLCRRVAAGQLRPEDVDEAAVAASLYTHDLP 189
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
D D +IRT GE R+S+FLLWQ+AY+EF F ++PDF AL +Y R RRFG
Sbjct: 190 DVDFLIRTSGELRVSNFLLWQMAYAEFYFTELHFPDFREAALVEALTEYARRQRRFGQTG 249
Query: 241 KK 242
++
Sbjct: 250 QQ 251
>gi|229815411|ref|ZP_04445743.1| hypothetical protein COLINT_02459 [Collinsella intestinalis DSM
13280]
gi|229808944|gb|EEP44714.1| hypothetical protein COLINT_02459 [Collinsella intestinalis DSM
13280]
Length = 261
Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 97/240 (40%), Positives = 146/240 (60%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+A + + P HI IMDGNGRWA +RGL R GH+ GI +++ A +G+ L+ +
Sbjct: 21 IADIDMARIPRHISCIMDGNGRWATSRGLGRGEGHKAGIVALQDVITACVRMGVDVLSAY 80
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP +E+ L+ L LK+ N++V +G+ +L V +
Sbjct: 81 AFSTENWNRPQAEVDLLMYLFAKTFVDELPLLKRENVRVEFLGDISALPKKTRDVFERGL 140
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+TR +TG+ L +A NY R EI+RA+++I + + +G + +D +L+A +L T+ +PD
Sbjct: 141 AETRDHTGMTLALAVNYGGRAEITRAVRHIAEAVSTGDIAVEQIDDALVADHLYTAGLPD 200
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
P+L+IRT GE R+S++LLWQ+AYSEF YWPDF R A+ + RDRRFGGLS+
Sbjct: 201 PELVIRTSGELRVSNYLLWQIAYSEFYITDTYWPDFDRWGLVRAIASFQGRDRRFGGLSQ 260
>gi|124026194|ref|YP_001015310.1| undecaprenyl pyrophosphate synthetase [Prochlorococcus marinus str.
NATL1A]
gi|123961262|gb|ABM76045.1| Undecaprenyl pyrophosphate synthetase (UPPS) [Prochlorococcus
marinus str. NATL1A]
Length = 256
Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 91/239 (38%), Positives = 137/239 (57%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + S P+HI +IMDGNGRWA +GLPR GH G+E + + GI LT+
Sbjct: 18 LPKDLDSLRMPEHIAVIMDGNGRWAKEKGLPRTIGHTAGVEALKTTLHLCSNWGIGALTV 77
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP E++ L+ L +S LK+ +LK +K+ +G+ L + ++KE+
Sbjct: 78 YAFSTENWSRPSEEVNFLMTLFESVLKRELTNLKLEEVKINFMGDLDPLPIGLKDLIKES 137
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ T + G++ + NY R E+ RA + + + G + +D ++ A L T+
Sbjct: 138 VESTSNSKGIHFNVCTNYGGRRELVRAAQKLAERSVKGELDPSLIDENVFASELFTASEV 197
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRT GEKR+S+FLLWQ+AY+E WPDF+ + AL Y R RRFGG+
Sbjct: 198 DPDLLIRTSGEKRISNFLLWQLAYAEIHITDVLWPDFNADTLTKALLDYQSRRRRFGGV 256
>gi|320010910|gb|ADW05760.1| undecaprenyl diphosphate synthase [Streptomyces flavogriseus ATCC
33331]
Length = 276
Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 86/238 (36%), Positives = 139/238 (58%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P H+ ++MDGNGRWA RGLPR GH+ G V +++ E+G+KNL+++AF
Sbjct: 29 KIPGELVPKHVAVVMDGNGRWAKERGLPRTEGHKVGEGVVMDVLKGCIEMGVKNLSLYAF 88
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + +++ + + I++R +G L ++ L+ A++Q
Sbjct: 89 STENWKRSPDEVKFLMNFNRDVIRRRRDEMDELGIRIRWVGRMPKLWKSVVQELQVAQEQ 148
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N + L+ NY R EI+ A + I +D+ +G + V+ AKY+ D+PD D
Sbjct: 149 TKDNDKMTLYFCVNYGGRAEIADAAQRIAEDVAAGRLDPSKVNEKTFAKYIYYPDMPDVD 208
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
L +R GE+R S++L+WQ AY+E VF WPDF R ++A ++ RDRRFGG +
Sbjct: 209 LFVRPSGEQRTSNYLIWQSAYAEMVFQDVLWPDFDRRDLWNACLEFARRDRRFGGAEE 266
>gi|33863328|ref|NP_894888.1| undecaprenyl pyrophosphate synthase [Prochlorococcus marinus str.
MIT 9313]
gi|124022702|ref|YP_001017009.1| undecaprenyl pyrophosphate synthase [Prochlorococcus marinus str.
MIT 9303]
gi|42559766|sp|Q7V6T7|UPPS_PROMM RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|33640777|emb|CAE21232.1| Undecaprenyl pyrophosphate synthetase (UPPS) [Prochlorococcus
marinus str. MIT 9313]
gi|123962988|gb|ABM77744.1| Undecaprenyl pyrophosphate synthetase (UPPS) [Prochlorococcus
marinus str. MIT 9303]
Length = 265
Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 90/235 (38%), Positives = 132/235 (56%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P+H+ +IMDGNGRWA ARGLPR GHR G+E + ++ GI LT +AFS
Sbjct: 21 LDPYRLPNHVAVIMDGNGRWAKARGLPRMVGHRAGVEALKRTLRLCSDWGIGALTAYAFS 80
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP E++ L+ L + L++ SL++ +++R +G+ L + ++ EA + T
Sbjct: 81 TENWSRPGDEVNFLMTLFERVLQRELESLEREKVRIRFLGDLEGLPSGLQELISEATELT 140
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N G++ + NY R E+ A + + Q G + +D + L T+ DPDL
Sbjct: 141 VRNNGIHFNVCTNYGGRRELVLAAQKLAQRAARGDLDPTLIDENSFEAELLTAGEVDPDL 200
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE+R+S+FLLWQ+AY+E WPDF AL Y R RRFGGL
Sbjct: 201 LIRTSGERRISNFLLWQLAYAEIHVTDVCWPDFDEVALTKALFDYQSRCRRFGGL 255
>gi|300173488|ref|YP_003772654.1| undecaprenyl diphosphate synthase [Leuconostoc gasicomitatum LMG
18811]
gi|299887867|emb|CBL91835.1| undecaprenyl diphosphate synthase [Leuconostoc gasicomitatum LMG
18811]
Length = 259
Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats.
Identities = 98/237 (41%), Positives = 144/237 (60%), Gaps = 3/237 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
PDH+ IIMDGNGRWA R +PR AGH+ + +I AA+++G+K LT++AFS NW
Sbjct: 18 KIPDHVAIIMDGNGRWAKQRLMPRIAGHKTAMNTVKKIATAASDLGVKVLTLYAFSTENW 77
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E++ L++L F L KNNI+V+++G+ L +K A +QT T
Sbjct: 78 SRPKDEVNFLMQLPIDFFNDFVPDLVKNNIRVQIMGDINGLPKGTQIAVKNAINQTAKGT 137
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD---PDLI 185
G+ L A NY + EI A K + Q + SG + +D++++L ++ L T D+ D PDL+
Sbjct: 138 GMILNFALNYGGQVEIVEAAKTLAQQVASGEIVPNDINATLFSRALQTGDLGDLAAPDLM 197
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRT GE RLS+F+ +Q AY+E F WPD++ + A+ + RDRRFGGL+ K
Sbjct: 198 IRTSGELRLSNFMPYQAAYTELYFTDVLWPDYTADNLVEAITSFTSRDRRFGGLNDK 254
>gi|319937401|ref|ZP_08011808.1| undecaprenyl pyrophosphate synthetase [Coprobacillus sp. 29_1]
gi|319807767|gb|EFW04360.1| undecaprenyl pyrophosphate synthetase [Coprobacillus sp. 29_1]
Length = 249
Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats.
Identities = 93/235 (39%), Positives = 137/235 (58%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IMDGNGRWA R +PR GH +G + + A +G+K +T++AFS
Sbjct: 13 LDMHNIPGHIAFIMDGNGRWAKKRKMPRTYGHHEGTKTIRTLALEANRLGVKAMTVYAFS 72
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
N++R SE+ + KL K F L +NN+++R IG+ + ++KEA +T
Sbjct: 73 TENFKREASEVEYIFKLPKEFFNLYLKELMENNVQIRYIGHLEMAPIETQNIIKEAIQRT 132
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+N+GL L AF Y RDEI A K I + ++G + D+ ++L T D+P DL
Sbjct: 133 SVNSGLILTFAFIYGGRDEIVEATKVICEKYKNGEISLDDMTEDYFEQHLMTKDLPPVDL 192
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
++R+ GE RLS+FL WQ+AY+EF+F WPDF E A+ Y R+RRFGG+
Sbjct: 193 MVRSSGECRLSNFLPWQLAYAEFIFDETLWPDFDEEHLHRAIAIYQGRERRFGGV 247
>gi|238763974|ref|ZP_04624930.1| Di-trans,poly-cis-decaprenylcistransferase [Yersinia kristensenii
ATCC 33638]
gi|238697791|gb|EEP90552.1| Di-trans,poly-cis-decaprenylcistransferase [Yersinia kristensenii
ATCC 33638]
Length = 252
Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats.
Identities = 86/230 (37%), Positives = 135/230 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R GH+ G++ V+ AA + LT++AFS NW R
Sbjct: 16 PRHVAIIMDGNGRWAKKQGKLRVFGHKAGVKSVRRAVSFAATHQLDALTLYAFSSENWNR 75
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L++L L SL K+ +++ VIG+ + + ++ +E+ T N GL
Sbjct: 76 PAQEVTALMELFVHALDSEVKSLHKHKVRLSVIGDISRFSERLQKRIRRSEELTANNDGL 135
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I + ++++ + ++ G + D+ + ++ + + DL+IRTGG
Sbjct: 136 RLNIAANYGGRWDIIQGVRHLAEQVQRGELQPTDICEKSLNSHICLHEQSEVDLVIRTGG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E R+S+FLLWQ+AY+E F WPDF +F ALN + R+RRFGG +
Sbjct: 196 EHRISNFLLWQIAYAELYFTDVLWPDFDEHVFEGALNAFAQRERRFGGTT 245
>gi|291616350|ref|YP_003519092.1| UppS [Pantoea ananatis LMG 20103]
gi|291151380|gb|ADD75964.1| UppS [Pantoea ananatis LMG 20103]
gi|327392802|dbj|BAK10224.1| undecaprenyl pyrophosphate synthetase UppS [Pantoea ananatis
AJ13355]
Length = 250
Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats.
Identities = 91/238 (38%), Positives = 136/238 (57%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ P H+ IIMDGNGRWA +G R +GH+ G++ V+ A ++ LT++AFS
Sbjct: 12 QQGTGPRHVAIIMDGNGRWAKNQGKLRISGHKAGVKSVRRAVSFAVSNNLEALTLYAFSS 71
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E++ L++L L SL K+N+++R+IG+ I ++ AE T
Sbjct: 72 ENWSRPAQEVTALMELFVWALDSEVKSLHKHNVRLRIIGDISRFSPRIQERVRRAEALTE 131
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N L L IA NY R +I +K + + ++ G + + + L + + DL+
Sbjct: 132 NNDRLTLNIAANYGGRWDIIEGVKKLAEQVQEGLLRPDQITEESLTSQLCMNQLAPVDLV 191
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
IRTGGE R+S+FLLWQ+AY+EF F WPDF +F ALN ++LR+RRFGG + G
Sbjct: 192 IRTGGEHRISNFLLWQIAYAEFYFTDVLWPDFDEHVFEGALNAFSLRERRFGGAAPGG 249
>gi|330936820|gb|EGH40973.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 251
Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats.
Identities = 93/241 (38%), Positives = 145/241 (60%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + SS P H+ IIMDGN RWA R LP AGH+ G++ ++ AE ++ LT+F
Sbjct: 4 IKPAVPSSVPRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAEARVEVLTLF 63
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E+ L++L + L++ L +N I +R+IG+R ++ ++EAE
Sbjct: 64 AFSSENWQRPAEEVGALMELFFTALRRETKRLNENEISLRIIGDRSRFHPELQAAMREAE 123
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T + L IA NY + +I++A + + +++++G + D+ L+ L T D+P
Sbjct: 124 VRTSGTSRFVLQIAANYGGQWDIAQAAQRLAREVQAGHLQPEDITPQLLQTCLATGDLPL 183
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL IRTGGE R+S+FLLWQ+AY+E F +WPDF + AL + R RRFG S+
Sbjct: 184 PDLCIRTGGEHRISNFLLWQLAYAELYFSDLFWPDFKHDAMRAALADFASRQRRFGKTSE 243
Query: 242 K 242
+
Sbjct: 244 Q 244
>gi|333029737|ref|ZP_08457798.1| Undecaprenyl pyrophosphate synthase [Bacteroides coprosuis DSM
18011]
gi|332740334|gb|EGJ70816.1| Undecaprenyl pyrophosphate synthase [Bacteroides coprosuis DSM
18011]
Length = 245
Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats.
Identities = 90/238 (37%), Positives = 137/238 (57%), Gaps = 2/238 (0%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IIMDGNGRWA R R GH+ G + +I +A +G+K LT++ FS
Sbjct: 7 IDLNHIPKHIAIIMDGNGRWAKQRNKNRSYGHQAGADAVYKIAEESARLGVKYLTLYTFS 66
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP E++ L+ L+ L K++I ++IG + L D+ L + ++T
Sbjct: 67 SENWNRPSDEVTALMSLLMESLDDSL--FMKHDICFKIIGEQDKLPHDVQMRLNQCANKT 124
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ N G+ L +A +YSS E++ A K I ++ + ++ I + L T +P+PDL
Sbjct: 125 KGNKGMCLVLALSYSSHWELTEATKKIATLVKENKLDIEEITPDTIQQNLATQFMPNPDL 184
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IRTGGE RLS++LLWQ AY+EF F YWPDF + A+ + R+RRFG S++
Sbjct: 185 LIRTGGEYRLSNYLLWQCAYTEFYFCDTYWPDFKEDNLKEAIMDFQQRERRFGKTSEQ 242
>gi|119898196|ref|YP_933409.1| undecaprenyl pyrophosphate synthetase [Azoarcus sp. BH72]
gi|119670609|emb|CAL94522.1| probable undecaprenyl pyrophosphate synthetase [Azoarcus sp. BH72]
Length = 266
Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats.
Identities = 96/235 (40%), Positives = 133/235 (56%), Gaps = 3/235 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S+ P H+ IIMDGNGRWA R +PR AGH +G+E + A + G++ LT+FAFS N
Sbjct: 17 STVPRHVAIIMDGNGRWARKRFMPRIAGHTRGVESVRTTIRACMDRGVEYLTLFAFSSEN 76
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+S L++L LKK L +N I++R++G+ D ++ ++EAE T N
Sbjct: 77 WRRPADEVSFLMQLFIKSLKKEVGRLHQNGIRLRIVGDLERFDAPLIAAIREAEALTAAN 136
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L IA NY R +I A+ + +A L S P+PDL IR
Sbjct: 137 DRFTLTIAANYGGRWDILNALNRLVARHPERQGA---FSEEELASELSMSFAPEPDLFIR 193
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE+R+S+FLLWQ+AY+E F WPDF A+ Y R+RRFG S++
Sbjct: 194 TGGEQRISNFLLWQLAYAELYFTDTLWPDFDAAELDKAIAWYGARERRFGRTSEQ 248
>gi|258541748|ref|YP_003187181.1| undecaprenyl pyrophosphate synthetase [Acetobacter pasteurianus IFO
3283-01]
gi|256632826|dbj|BAH98801.1| undecaprenyl pyrophosphate synthetase [Acetobacter pasteurianus IFO
3283-01]
gi|256635883|dbj|BAI01852.1| undecaprenyl pyrophosphate synthetase [Acetobacter pasteurianus IFO
3283-03]
gi|256638938|dbj|BAI04900.1| undecaprenyl pyrophosphate synthetase [Acetobacter pasteurianus IFO
3283-07]
gi|256641992|dbj|BAI07947.1| undecaprenyl pyrophosphate synthetase [Acetobacter pasteurianus IFO
3283-22]
gi|256645047|dbj|BAI10995.1| undecaprenyl pyrophosphate synthetase [Acetobacter pasteurianus IFO
3283-26]
gi|256648102|dbj|BAI14043.1| undecaprenyl pyrophosphate synthetase [Acetobacter pasteurianus IFO
3283-32]
gi|256651155|dbj|BAI17089.1| undecaprenyl pyrophosphate synthetase [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256654146|dbj|BAI20073.1| undecaprenyl pyrophosphate synthetase [Acetobacter pasteurianus IFO
3283-12]
Length = 246
Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats.
Identities = 100/233 (42%), Positives = 142/233 (60%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ P H+ +IMDGNGRWA RGLPR AGHR G E V AA + G+ LT++AFS
Sbjct: 8 KKPAIPTHVAVIMDGNGRWARERGLPRLAGHRAGAEAVARCVRAAMQRGVAYLTLYAFSS 67
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW R E+S+L L++ +L+ L K +++R IG+ DD + L +AE TR
Sbjct: 68 ENWARGQEEVSDLTGLLRYYLRHKVRELHKEGVRLRFIGDLARFDDSLREELAQAESLTR 127
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N+ L L +A +Y R +I +A + + Q+ + G + + S+ +L TS VPDPD++
Sbjct: 128 GNSKLTLILALSYGGRLDIVQAAQRLAQEAKDGRIAPEQITESVFTNFLWTSGVPDPDVV 187
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+RT GE RLS+FLLWQ AY+E VF+ +WPDF+ F L+QY R+RRFG
Sbjct: 188 VRTSGECRLSNFLLWQSAYAELVFLNVFWPDFNERHFAMVLDQYAQRERRFGA 240
>gi|254501824|ref|ZP_05113975.1| undecaprenyl diphosphate synthase [Labrenzia alexandrii DFL-11]
gi|222437895|gb|EEE44574.1| undecaprenyl diphosphate synthase [Labrenzia alexandrii DFL-11]
Length = 255
Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats.
Identities = 108/240 (45%), Positives = 156/240 (65%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S S P+H+ IMDGNGRWA++RGLPR GHR+G+E +I+ AA G+ +TI++F
Sbjct: 15 SAAPSHVPNHVAFIMDGNGRWASSRGLPRTEGHRQGLEALRKIIRHAALRGVGIVTIYSF 74
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP E+ L+ L++ F+++ L + NI++R+IG R +LD IL +L +AE+
Sbjct: 75 STENWSRPEPEVRFLMGLLRRFVQRDLSELHRENIRIRIIGERDNLDAGILKLLLDAEEL 134
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
TR NTG+ L +AFNY +R E++ A+K + + + G + + S I+ LDT +PDPD
Sbjct: 135 TRNNTGMELVVAFNYGARQELTAAVKKLCEKVARGEIEPSAISESHISAELDTVGLPDPD 194
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
LI+RT GE RLS+FLLWQ AY+EF F WPDF AL + RDRR+GG++ +
Sbjct: 195 LIVRTSGELRLSNFLLWQAAYTEFYFSDLMWPDFDEAALDQALECFGNRDRRYGGVTAQA 254
>gi|330807785|ref|YP_004352247.1| Di-trans,poly-cis-decaprenylcistransferase (undecaprenyl
pyrophosphate synthetase) [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327375893|gb|AEA67243.1| Di-trans,poly-cis-decaprenylcistransferase (undecaprenyl
pyrophosphate synthetase) [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 251
Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats.
Identities = 93/234 (39%), Positives = 140/234 (59%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P H+ IIMDGN RWA R +P AGH+ G++ ++ AE G++ LT+FAFS NW
Sbjct: 11 AVPRHVAIIMDGNNRWAKKRFMPGVAGHKAGVDAVRAVIEVCAEAGVEVLTLFAFSSENW 70
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP E+S L+ L L++ L +N I +R+IG+R ++ ++EAE T
Sbjct: 71 QRPADEVSALMDLFLKALRREAKRLNENKISLRIIGDRSRFHPELQAAMREAESATAGPD 130
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
L IA NY + +I++A + + +++++G + D+ L+ L T D+P PDL IRT
Sbjct: 131 RFVLQIAANYGGQWDIAQAAQRLAREVQAGHLRPEDITPELLQTCLATGDLPLPDLCIRT 190
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GGE R+S+FLLWQ+AY+E F +WPDF E AL + R RRFG S++
Sbjct: 191 GGEHRISNFLLWQLAYAELYFSDLFWPDFKHEAMRTALADFASRQRRFGKTSEQ 244
>gi|218888002|ref|YP_002437323.1| undecaprenyl diphosphate synthase [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218758956|gb|ACL09855.1| undecaprenyl diphosphate synthase [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 250
Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats.
Identities = 95/237 (40%), Positives = 131/237 (55%), Gaps = 4/237 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
++ + P H+ IIMDGNGRWA RGL R GHR G E IV +GI +LT++ FS
Sbjct: 15 LLPETLPRHVAIIMDGNGRWATQRGLSRSDGHRAGTEAARAIVTECRTLGIPHLTMYTFS 74
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP +E+ L +L+ FL++ +L + +I++ V G L L+ A +T
Sbjct: 75 KENWGRPGAEVKFLFELLVDFLREELPNLIQRDIRLSVFGQLSDLPLAARKALEHAISRT 134
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
T + L +A NYS+RDEI A + + + + + A L ++ PDPDL
Sbjct: 135 AACTTMRLNLALNYSARDEILMACRALAAE----GLAPEAITEEAFAARLWSAGQPDPDL 190
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
+IRT GE R+S+FLL+Q AYSEF F WPDF+ E F AL Y R RRFG
Sbjct: 191 VIRTSGEVRISNFLLYQSAYSEFHFTDTLWPDFTPEHFRAALRDYAGRQRRFGKTEA 247
>gi|253700114|ref|YP_003021303.1| undecaprenyl pyrophosphate synthase [Geobacter sp. M21]
gi|251774964|gb|ACT17545.1| undecaprenyl diphosphate synthase [Geobacter sp. M21]
Length = 249
Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats.
Identities = 99/239 (41%), Positives = 143/239 (59%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S+ + P H+ +IMDGNGRWA R L R GH+KG+E IV + +GI LT+FAF
Sbjct: 3 SLERKNLPMHLAVIMDGNGRWAKQRMLRRIVGHQKGVETVRVIVEECSRLGIGYLTLFAF 62
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP +E+ L+ L+K +++ + +N+I+ VIGNR L DD+ ++ A ++
Sbjct: 63 SAENWLRPKTEVKALMALLKQYIRGETARMMQNDIRFNVIGNRADLPDDVNREIESAIEK 122
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T N G+ L +A +Y SR EI A K + D +G + +D + L T+ +PDPD
Sbjct: 123 TAGNRGMLLTLALSYGSRQEIVAAAKKLAIDAAAGRLDPETIDEGSLTGSLFTAGIPDPD 182
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRT GE R+S+FLLWQ+AY+E F WPDF R A + R+RRFG S++
Sbjct: 183 LLIRTSGEMRISNFLLWQLAYAELYFTDVNWPDFDRNELARAFRDFQSRERRFGMTSEQ 241
>gi|254168484|ref|ZP_04875328.1| undecaprenyl diphosphate synthase [Aciduliprofundum boonei T469]
gi|197622539|gb|EDY35110.1| undecaprenyl diphosphate synthase [Aciduliprofundum boonei T469]
Length = 258
Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats.
Identities = 97/240 (40%), Positives = 144/240 (60%), Gaps = 2/240 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + P H+GIIMDGN R+A + GHR+G + E++ E+GIK LT+
Sbjct: 19 LLKLVKEGKIPKHVGIIMDGNRRFARELDMKPTQGHREGKDKLEEVIEWCREIGIKILTV 78
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFS N++R E+ EL++L LKK + KN I+++VIG R L +++ ++
Sbjct: 79 YAFSTENFKRSREEVLELMRLFIENLKKAADDERVHKNKIRIKVIGQRDVLPEELREAIE 138
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
AE++T+ IA Y R+EI +AIK I Q+++ G + D+ + K+L T D
Sbjct: 139 YAEERTKNYDEFFFNIAIAYGGREEIIKAIKEIAQEVKDGKLEVEDITEETVRKHLYTGD 198
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+PDPDLI+RT GE+R+S+FLLWQ AYSEF F YWP F + F A+ Y +R RRFG
Sbjct: 199 LPDPDLILRTSGEERISNFLLWQSAYSEFYFADIYWPTFRKIDFLRAIRSYQMRQRRFGR 258
>gi|212710392|ref|ZP_03318520.1| hypothetical protein PROVALCAL_01452 [Providencia alcalifaciens DSM
30120]
gi|212686974|gb|EEB46502.1| hypothetical protein PROVALCAL_01452 [Providencia alcalifaciens DSM
30120]
Length = 250
Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats.
Identities = 97/236 (41%), Positives = 142/236 (60%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
++ S P H+ IIMDGNGRWA RG R GHR G+E V A + I++LT++A
Sbjct: 6 ENLSDSMMPKHVAIIMDGNGRWAKQRGKFRITGHRAGVESVRSSVRFAVKNNIRSLTLYA 65
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW+RP E+S L+ L L +L KNN+K+++IG+ + + + +AE
Sbjct: 66 FSSENWKRPEKEVSSLMDLFVFALDNEVKNLHKNNVKLKIIGDVGRFSETLRKRIDKAEA 125
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTGL L IA NY R +I ++K +++ + G + D+ S I+ ++ D
Sbjct: 126 LTANNTGLQLNIAANYGGRWDIVNSVKQVYEKVNRGELSVDDITESTISDHICMHDQECV 185
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DL+IRTGGE R+S+FLLWQVAY+EF F WPDF +F A++ ++ R+RR+GG
Sbjct: 186 DLVIRTGGEHRISNFLLWQVAYAEFYFTNVLWPDFDEMVFQDAVDAFSKRERRYGG 241
>gi|257464023|ref|ZP_05628408.1| undecaprenyl pyrophosphate synthetase [Fusobacterium sp. D12]
gi|317061544|ref|ZP_07926029.1| undecaprenyl pyrophosphate synthetase [Fusobacterium sp. D12]
gi|313687220|gb|EFS24055.1| undecaprenyl pyrophosphate synthetase [Fusobacterium sp. D12]
Length = 230
Score = 282 bits (721), Expect = 3e-74, Method: Composition-based stats.
Identities = 103/237 (43%), Positives = 142/237 (59%), Gaps = 7/237 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
MS P HI IIMDGNGRWA RGLPR GHR+G +I+ A E+GI+ LT++AFS
Sbjct: 1 MSIEVPKHIAIIMDGNGRWAKKRGLPRTLGHREGARTLQKILKYAGEIGIQYLTVYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW R E+S L+KL ++KK +L KNN++ V G + + D +L +K E++T
Sbjct: 61 ENWSRSEEEVSALMKLFSKYMKKEEKNLIKNNVRFLVSGRKDRVSDSLLREIKALEEKTS 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
NTG+ IAFNY R EI A+ + Q+ + + I+ +L ++PDP+LI
Sbjct: 121 QNTGITFHIAFNYGGRAEIVDAVNRLLQEKK------ESISEEDISSHLY-QNLPDPELI 173
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRT GE R+S+FLLWQ+AY+E WPDF AL + R+RRFGG+ +K
Sbjct: 174 IRTSGEFRISNFLLWQLAYAEIYVTDTLWPDFEERDLELALENFQKRERRFGGVYEK 230
>gi|217967586|ref|YP_002353092.1| undecaprenyl diphosphate synthase [Dictyoglomus turgidum DSM 6724]
gi|217336685|gb|ACK42478.1| undecaprenyl diphosphate synthase [Dictyoglomus turgidum DSM 6724]
Length = 244
Score = 282 bits (721), Expect = 3e-74, Method: Composition-based stats.
Identities = 100/237 (42%), Positives = 137/237 (57%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P HI IMDGNGRWA R LPR GHR+G V +I A GI LT FAF
Sbjct: 5 EVPKEKLPKHIAFIMDGNGRWAKERNLPRLIGHREGALVVEKISEIAFNWGINYLTFFAF 64
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRRP E+ L++L+ + K L KN I+++VIGN L + + ++
Sbjct: 65 STENWRRPREEVEGLMQLLDESIDKFKDKLVKNKIRLKVIGNLDELPTYLQRRINYVVEE 124
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ L +A NY R +I A+K I ++ ++ DV+ +L + +L T D+P+PD
Sbjct: 125 TKNGKDKVLTVALNYGGRWDILEAVKKIALQVKENNLKIEDVNENLFSSFLSTYDLPEPD 184
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
L+IRT GE R+S+FLLWQ+AY+E F P+YWPDF+ E A + R RRFGGL
Sbjct: 185 LLIRTSGEYRISNFLLWQIAYTELWFTPKYWPDFNEEDLRMACLDFAKRKRRFGGLE 241
>gi|157376289|ref|YP_001474889.1| di-trans, poly-cis-decaprenylcistransferase [Shewanella sediminis
HAW-EB3]
gi|157318663|gb|ABV37761.1| Di-trans, poly-cis-decaprenylcistransferase [Shewanella sediminis
HAW-EB3]
Length = 264
Score = 282 bits (721), Expect = 3e-74, Method: Composition-based stats.
Identities = 94/236 (39%), Positives = 143/236 (60%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
VA ++ S P H+ IIMDGNGRWA A+G PR GHR G++ +V+ A E+GI +LT+F
Sbjct: 16 VAELVKLSTPKHVAIIMDGNGRWAQAQGKPRVMGHRAGVKAVRRVVSTAREMGIDSLTLF 75
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP E++ L++L + L++ L KN +++ +IG+ + + + AE
Sbjct: 76 AFSSENWRRPDKEVTLLMELFFTVLQREIKLLHKNGVRLNIIGDISRFPERLQKQIASAE 135
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T N+ L L +A NY R +I +A + + + +ESG + S + ++L + P+
Sbjct: 136 AKTADNSELILNVAANYGGRWDIMQAAQTLAKKVESGEMNSSQFTEEALNEHLCMQNQPE 195
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRTGG+ R+S+F+LWQ AY+E VF WPDF F + + R RRFG
Sbjct: 196 VDLMIRTGGDFRISNFILWQAAYAELVFTDTLWPDFDENAFRQTVAIFASRQRRFG 251
>gi|88808909|ref|ZP_01124418.1| Undecaprenyl pyrophosphate synthetase (UPPS) [Synechococcus sp. WH
7805]
gi|88786851|gb|EAR18009.1| Undecaprenyl pyrophosphate synthetase (UPPS) [Synechococcus sp. WH
7805]
Length = 265
Score = 282 bits (721), Expect = 3e-74, Method: Composition-based stats.
Identities = 91/235 (38%), Positives = 140/235 (59%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ S P H+ +IMDGNGRWA ARGLPR GHR G+E + +++GI+ LT +AFS
Sbjct: 21 LDLSKLPGHLAVIMDGNGRWAKARGLPRVMGHRAGVEALKSTLRLCSDLGIRALTAYAFS 80
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP E++ L+ L + L++ ++L+ +++R +G+ L + ++ +A +T
Sbjct: 81 TENWSRPGEEVNFLMTLFERVLQRELHALESEQVRIRFLGDLEDLPLRLQTLIADAMRRT 140
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N G++ + NY R E+ RA + + + + G + +D + +A L T DPDL
Sbjct: 141 ADNRGIHFNVCTNYGGRRELVRASRRLAERVALGELEVSQIDENTLAAELYTVGELDPDL 200
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE+R+S+FLLWQ+AY+E +WPDF + F AL Y R RRFGGL
Sbjct: 201 LIRTSGERRISNFLLWQLAYAEIHVTDVFWPDFGADALFSALLDYQSRCRRFGGL 255
>gi|22127006|ref|NP_670429.1| undecaprenyl pyrophosphate synthase [Yersinia pestis KIM 10]
gi|45442569|ref|NP_994108.1| undecaprenyl pyrophosphate synthase [Yersinia pestis biovar
Microtus str. 91001]
gi|51597313|ref|YP_071504.1| undecaprenyl pyrophosphate synthase [Yersinia pseudotuberculosis IP
32953]
gi|108806522|ref|YP_650438.1| undecaprenyl pyrophosphate synthase [Yersinia pestis Antiqua]
gi|108813111|ref|YP_648878.1| undecaprenyl pyrophosphate synthetase [Yersinia pestis Nepal516]
gi|145598945|ref|YP_001163021.1| undecaprenyl pyrophosphate synthetase [Yersinia pestis Pestoides F]
gi|149366950|ref|ZP_01888983.1| undecaprenyl pyrophosphate synthetase [Yersinia pestis CA88-4125]
gi|153950638|ref|YP_001400002.1| undecaprenyl pyrophosphate synthase [Yersinia pseudotuberculosis IP
31758]
gi|162421529|ref|YP_001607767.1| undecaprenyl pyrophosphate synthetase [Yersinia pestis Angola]
gi|165927096|ref|ZP_02222928.1| undecaprenyl diphosphate synthase [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165939819|ref|ZP_02228359.1| undecaprenyl diphosphate synthase [Yersinia pestis biovar
Orientalis str. IP275]
gi|166011937|ref|ZP_02232835.1| undecaprenyl diphosphate synthase [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166211502|ref|ZP_02237537.1| undecaprenyl diphosphate synthase [Yersinia pestis biovar Antiqua
str. B42003004]
gi|167400023|ref|ZP_02305541.1| undecaprenyl diphosphate synthase [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167419453|ref|ZP_02311206.1| undecaprenyl diphosphate synthase [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167425310|ref|ZP_02317063.1| undecaprenyl diphosphate synthase [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|167470426|ref|ZP_02335130.1| undecaprenyl diphosphate synthase [Yersinia pestis FV-1]
gi|170023320|ref|YP_001719825.1| undecaprenyl pyrophosphate synthase [Yersinia pseudotuberculosis
YPIII]
gi|186896418|ref|YP_001873530.1| undecaprenyl pyrophosphate synthase [Yersinia pseudotuberculosis
PB1/+]
gi|218928217|ref|YP_002346092.1| undecaprenyl pyrophosphate synthase [Yersinia pestis CO92]
gi|229837756|ref|ZP_04457916.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) [Yersinia
pestis Pestoides A]
gi|229840978|ref|ZP_04461137.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) [Yersinia
pestis biovar Orientalis str. PEXU2]
gi|229843079|ref|ZP_04463229.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) [Yersinia
pestis biovar Orientalis str. India 195]
gi|229903554|ref|ZP_04518667.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) [Yersinia
pestis Nepal516]
gi|270487335|ref|ZP_06204409.1| di-trans,poly-cis-decaprenylcistransferase [Yersinia pestis KIM
D27]
gi|42560001|sp|Q8ZH61|UPPS_YERPE RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|73920287|sp|Q667J4|UPPS_YERPS RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|21960052|gb|AAM86680.1|AE013913_10 hypothetical protein y3130 [Yersinia pestis KIM 10]
gi|45437434|gb|AAS62985.1| undecaprenyl pyrophosphate synthetase [Yersinia pestis biovar
Microtus str. 91001]
gi|51590595|emb|CAH22236.1| undecaprenyl pyrophosphate synthetase [Yersinia pseudotuberculosis
IP 32953]
gi|108776759|gb|ABG19278.1| Undecaprenyl pyrophosphate synthetase [Yersinia pestis Nepal516]
gi|108778435|gb|ABG12493.1| Undecaprenyl pyrophosphate synthetase [Yersinia pestis Antiqua]
gi|115346828|emb|CAL19714.1| undecaprenyl pyrophosphate synthetase [Yersinia pestis CO92]
gi|145210641|gb|ABP40048.1| Undecaprenyl pyrophosphate synthetase [Yersinia pestis Pestoides F]
gi|149290564|gb|EDM40640.1| undecaprenyl pyrophosphate synthetase [Yersinia pestis CA88-4125]
gi|152962133|gb|ABS49594.1| undecaprenyl diphosphate synthase [Yersinia pseudotuberculosis IP
31758]
gi|162354344|gb|ABX88292.1| undecaprenyl diphosphate synthase [Yersinia pestis Angola]
gi|165912222|gb|EDR30859.1| undecaprenyl diphosphate synthase [Yersinia pestis biovar
Orientalis str. IP275]
gi|165920992|gb|EDR38216.1| undecaprenyl diphosphate synthase [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165989203|gb|EDR41504.1| undecaprenyl diphosphate synthase [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166207273|gb|EDR51753.1| undecaprenyl diphosphate synthase [Yersinia pestis biovar Antiqua
str. B42003004]
gi|166962194|gb|EDR58215.1| undecaprenyl diphosphate synthase [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167050731|gb|EDR62139.1| undecaprenyl diphosphate synthase [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167055710|gb|EDR65494.1| undecaprenyl diphosphate synthase [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|169749854|gb|ACA67372.1| undecaprenyl diphosphate synthase [Yersinia pseudotuberculosis
YPIII]
gi|186699444|gb|ACC90073.1| undecaprenyl diphosphate synthase [Yersinia pseudotuberculosis
PB1/+]
gi|229679324|gb|EEO75427.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) [Yersinia
pestis Nepal516]
gi|229689955|gb|EEO82014.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) [Yersinia
pestis biovar Orientalis str. India 195]
gi|229697344|gb|EEO87391.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) [Yersinia
pestis biovar Orientalis str. PEXU2]
gi|229704133|gb|EEO91145.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) [Yersinia
pestis Pestoides A]
gi|262365344|gb|ACY61901.1| undecaprenyl pyrophosphate synthetase [Yersinia pestis D182038]
gi|270335839|gb|EFA46616.1| di-trans,poly-cis-decaprenylcistransferase [Yersinia pestis KIM
D27]
gi|320014183|gb|ADV97754.1| undecaprenyl pyrophosphate synthetase [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 252
Score = 282 bits (721), Expect = 3e-74, Method: Composition-based stats.
Identities = 87/230 (37%), Positives = 134/230 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R GH+ G++ V+ AA+ + LT++AFS NW R
Sbjct: 16 PRHVAIIMDGNGRWAKNKGKLRVFGHKAGVKSVRRAVSFAAKHNLDALTLYAFSSENWNR 75
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L++L L SL K+N+++ +IG+ + ++ +E T N GL
Sbjct: 76 PDQEVTALMELFVRALDSEVKSLHKHNVRLSIIGDISRFSGRLQERIRRSEKLTANNDGL 135
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I + ++++ + ++ G + D+ + Y+ + DL+IRTGG
Sbjct: 136 KLNIAANYGGRWDIIQGVRHLAEQVQKGELQPTDISEESLNSYICLHEQSQVDLVIRTGG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E R+S+FLLWQ+AY+E F WPDF +F ALN + R+RRFGG +
Sbjct: 196 EHRISNFLLWQIAYAELYFTDVLWPDFDENVFEGALNAFAQRERRFGGTT 245
>gi|182438808|ref|YP_001826527.1| putative undecaprenyl phosphate synthetase [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|178467324|dbj|BAG21844.1| putative undecaprenyl phosphate synthetase [Streptomyces griseus
subsp. griseus NBRC 13350]
Length = 287
Score = 282 bits (721), Expect = 4e-74, Method: Composition-based stats.
Identities = 88/235 (37%), Positives = 136/235 (57%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P H+ ++MDGNGRWA RGLPR GH+ G V +++ E+G+KNL+++AF
Sbjct: 29 KIPGELVPQHVAVVMDGNGRWAKERGLPRTEGHKVGEGVVMDVLKGCIEMGVKNLSLYAF 88
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + +++ + + I++R +G L ++ L+ A++Q
Sbjct: 89 STENWKRSPDEVKFLMNFNRDVIRRRRDEMDELGIRIRWVGRMPKLWKSVVQELQVAQEQ 148
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N + L+ NY R EI+ A + I QD+ +G + V+ AKY D+PD D
Sbjct: 149 TKDNDRMTLYFCVNYGGRAEIADAAQRIAQDVAAGRLDPSKVNEKTFAKYTYYPDMPDVD 208
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R GE+R S++L+WQ AY+E VF WPDF R + A +Y RDRRFGG
Sbjct: 209 LFVRPSGEQRTSNYLIWQSAYAEMVFQDVLWPDFDRRDLWRACLEYAQRDRRFGG 263
>gi|167750046|ref|ZP_02422173.1| hypothetical protein EUBSIR_01014 [Eubacterium siraeum DSM 15702]
gi|167657067|gb|EDS01197.1| hypothetical protein EUBSIR_01014 [Eubacterium siraeum DSM 15702]
Length = 245
Score = 282 bits (721), Expect = 4e-74, Method: Composition-based stats.
Identities = 98/230 (42%), Positives = 139/230 (60%), Gaps = 1/230 (0%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+G IMDGNGRWA RGLPR AGH +G +VF V ++GIK T +AFS NW+
Sbjct: 17 VPLHVGFIMDGNGRWAKKRGLPRKAGHSQGAKVFRRTVEDCRDIGIKYCTFYAFSTENWK 76
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ ++KL+ +L S+ + N ++ +G++ + DDDI L E E+ ++ N G
Sbjct: 77 RPKDEVDAIMKLLVKYLD-DIRSMAQKNTRIIFLGDKSAFDDDIQARLVEIEEISKNNDG 135
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L + +A NY +DEI A K + +D + G V YL T +P DLIIR
Sbjct: 136 LYVLVALNYGGKDEILTAAKRLARDYKEGKVDLDGFTEDDFDNYLYTKGIPPVDLIIRPS 195
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE+R S+FL+WQ AY+E +F+ WPDFS++ A ++Y R+RRFGGL
Sbjct: 196 GEQRTSNFLIWQGAYAELLFMDVLWPDFSKKDLIAACDEYARRNRRFGGL 245
>gi|146341065|ref|YP_001206113.1| undecaprenyl pyrophosphate synthase [Bradyrhizobium sp. ORS278]
gi|146193871|emb|CAL77888.1| Undecaprenyl pyrophosphate synthetase 2 (UPP synthetase 2)
(Di-trans,poly-cis-decaprenylcistransferase 2)
(Undecaprenyl diphosphate synthase 2) (UDS 2)
[Bradyrhizobium sp. ORS278]
Length = 252
Score = 282 bits (721), Expect = 4e-74, Method: Composition-based stats.
Identities = 120/232 (51%), Positives = 163/232 (70%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWAAARGLPR GHR+G+E +V A+ E+GI+ LTIF+FS NW R
Sbjct: 18 PAHVAIIMDGNGRWAAARGLPRAEGHRRGVEALRRVVRASDELGIRYLTIFSFSSENWSR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SEI +L L++ F++ +L ++ ++VRVIG R L+ DI +L EAE+ TR NT L
Sbjct: 78 PASEIGDLFGLLRRFIRNDLATLHRDGVRVRVIGERAGLEPDICALLSEAEELTRANTKL 137
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +AFNY SR EI+RA +N+ +++ G +D+ I +LD D+PDPDLIIRT G
Sbjct: 138 TLVVAFNYGSRQEIARAAQNLAREVAEGRRDPASIDADAIGAHLDVPDIPDPDLIIRTSG 197
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+RLS+FL+WQ AYSE VF+P++WPDF + A+ ++ R+RRFGGL K
Sbjct: 198 EQRLSNFLMWQAAYSELVFVPQHWPDFDKAALEGAIAEFGRRERRFGGLVAK 249
>gi|328882347|emb|CCA55586.1| Undecaprenyl pyrophosphate synthetase [Streptomyces venezuelae ATCC
10712]
Length = 274
Score = 282 bits (721), Expect = 4e-74, Method: Composition-based stats.
Identities = 89/236 (37%), Positives = 139/236 (58%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ S P+H+ I+MDGNGRWA RGLPR GH+ G E +++ A E+G+ +++++AF
Sbjct: 28 KLQSELVPEHVAIVMDGNGRWAKERGLPRTEGHKVGAEQVLDVLQGAIEMGVGSISLYAF 87
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + F++K L ++VR +G L + L+ A++Q
Sbjct: 88 STENWKRSPEEVRFLMNFNRDFIRKSRDQLDSLGVRVRWVGRMPKLWKSVAKELQVAQEQ 147
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NT L L+ NY R E++ A + + +D+ +G + + I KYL D+PD D
Sbjct: 148 TKDNTKLTLYFCMNYGGRAELTDAAQALAEDVRAGRLDPAKITEKTIQKYLYYPDMPDVD 207
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
L +R GE+R S++L+WQ AY+E VF WPDF R + A ++ RDRRFGG+
Sbjct: 208 LFLRPSGEQRTSNYLIWQSAYAEMVFQDVLWPDFDRRDLWRACVEFAQRDRRFGGV 263
>gi|206900891|ref|YP_002250922.1| di-trans,poly-cis-decaprenylcistransferase [Dictyoglomus
thermophilum H-6-12]
gi|206739994|gb|ACI19052.1| di-trans,poly-cis-decaprenylcistransferase [Dictyoglomus
thermophilum H-6-12]
Length = 244
Score = 282 bits (721), Expect = 4e-74, Method: Composition-based stats.
Identities = 102/237 (43%), Positives = 138/237 (58%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P HI IMDGNGRWA R LPR GHR+G V +I A GI LT FAF
Sbjct: 5 EIPKEKLPKHIAFIMDGNGRWAKERNLPRLMGHREGALVVEKISEIAFNWGINYLTFFAF 64
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP E+ L+KL+ + K L +N IK++VIGN L + + +K ++
Sbjct: 65 STENWKRPREEVEGLMKLLDESIDKFKDKLIENKIKLKVIGNIEELPNYLQRRIKYVIEE 124
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ L IA NY R +I +A+K I + + D++ SL + +L T D+P+PD
Sbjct: 125 TKTGEDKVLTIALNYGGRWDILQAVKRIALQVRDNKLQIEDINESLFSSFLSTFDLPEPD 184
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
L+IRT GE R+S+FLLWQ+AY+E F P+YWPDF+ E A + R RRFGGL
Sbjct: 185 LLIRTSGEYRISNFLLWQIAYTELWFTPKYWPDFNEEDLKKACLDFAQRKRRFGGLE 241
>gi|169333880|ref|ZP_02861073.1| hypothetical protein ANASTE_00266 [Anaerofustis stercorihominis DSM
17244]
gi|169259445|gb|EDS73411.1| hypothetical protein ANASTE_00266 [Anaerofustis stercorihominis DSM
17244]
Length = 238
Score = 282 bits (721), Expect = 4e-74, Method: Composition-based stats.
Identities = 96/238 (40%), Positives = 146/238 (61%), Gaps = 4/238 (1%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P+H+ IIMDGNGRWA +G R GH+ G + +I+ A ++ IK+LT++AF
Sbjct: 5 KLDKDNMPEHLAIIMDGNGRWAKQKGKIRSFGHKFGAKTVKDIIRAVNDLNIKHLTLYAF 64
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP E++ ++ L+ +L K L K N+K+ IG+ S+ + + + ++
Sbjct: 65 STENWKRPKDEVTTIMNLVVEYLNKETDDLIKENVKMDFIGDIGSMPEKTRISMNDTIER 124
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ +GLN+ IA NY R EI A K I ++ + + D+D L +KYL SD + D
Sbjct: 125 TKNGSGLNVHIALNYGGRKEIVNAAKEIIKE----GIDACDLDEELFSKYLYNSDNTEVD 180
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
L+IRTGG+ R+S+FLLWQVAYSE F WPDF++E A+ + ++RRFGGL K
Sbjct: 181 LLIRTGGDIRISNFLLWQVAYSELYFCDTLWPDFTKEELHKAIYSFQHKERRFGGLVK 238
>gi|254166833|ref|ZP_04873687.1| undecaprenyl diphosphate synthase [Aciduliprofundum boonei T469]
gi|289596094|ref|YP_003482790.1| undecaprenyl diphosphate synthase [Aciduliprofundum boonei T469]
gi|197624443|gb|EDY37004.1| undecaprenyl diphosphate synthase [Aciduliprofundum boonei T469]
gi|289533881|gb|ADD08228.1| undecaprenyl diphosphate synthase [Aciduliprofundum boonei T469]
Length = 258
Score = 282 bits (721), Expect = 4e-74, Method: Composition-based stats.
Identities = 97/240 (40%), Positives = 144/240 (60%), Gaps = 2/240 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + P H+GIIMDGN R+A + GHR+G + E++ E+GIK LT+
Sbjct: 19 LLKLVKEGKIPKHVGIIMDGNRRFARELDMKPTQGHREGKDKLEEVIEWCREIGIKILTV 78
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFS N++R E+ EL++L LKK + KN I+++VIG R L +++ ++
Sbjct: 79 YAFSTENFKRSREEVLELMRLFIENLKKAADDERVHKNKIRIKVIGQREVLPEELREAIE 138
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
AE++T+ IA Y R+EI +AIK I Q+++ G + D+ + K+L T D
Sbjct: 139 YAEERTKNYDEFFFNIAIAYGGREEIIKAIKEIAQEVKDGKLEVEDITEETVRKHLYTGD 198
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+PDPDLI+RT GE+R+S+FLLWQ AYSEF F YWP F + F A+ Y +R RRFG
Sbjct: 199 LPDPDLILRTSGEERISNFLLWQSAYSEFYFADIYWPTFRKIDFLRAIRSYQMRQRRFGR 258
>gi|76798732|ref|ZP_00780951.1| undecaprenyl diphosphate synthase [Streptococcus agalactiae 18RS21]
gi|76585911|gb|EAO62450.1| undecaprenyl diphosphate synthase [Streptococcus agalactiae 18RS21]
Length = 226
Score = 282 bits (721), Expect = 4e-74, Method: Composition-based stats.
Identities = 101/226 (44%), Positives = 135/226 (59%), Gaps = 4/226 (1%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA R PR GH+ G++ E+ AA+ +G+K LT++AFS NW RP E+
Sbjct: 1 MDGNGRWAKKRLKPRVMGHKAGMDALQEVTIAASGLGVKVLTVYAFSTENWSRPDDEVKF 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
++ L F K L KNN++V+VIG+ L ++ A +T+ N+GL L A N
Sbjct: 61 IMNLPVEFFDKYVPELDKNNVRVQVIGDTHKLPKATYDAMQRACLRTKHNSGLVLNFALN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLIIRTGGEKR 193
Y R EI+ AIK I QD+ + D+ L+A +L T+ +P DPDLIIRT GE R
Sbjct: 121 YGGRSEITNAIKEIAQDVLEAKLNPDDITEDLVANHLMTNSLPYLYRDPDLIIRTSGELR 180
Query: 194 LSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
LS+FL WQ AYSEF F P WPDF ++ A+ YN R RRFG +
Sbjct: 181 LSNFLPWQSAYSEFYFTPVLWPDFKKDELHKAIVDYNQRHRRFGSV 226
>gi|84500822|ref|ZP_00999057.1| undecaprenyl diphosphate synthase [Oceanicola batsensis HTCC2597]
gi|84390889|gb|EAQ03307.1| undecaprenyl diphosphate synthase [Oceanicola batsensis HTCC2597]
Length = 242
Score = 281 bits (720), Expect = 4e-74, Method: Composition-based stats.
Identities = 107/229 (46%), Positives = 151/229 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG PR GH G + EIV A ++G++ LTIF FS NW+R
Sbjct: 12 PRHVAIIMDGNGRWATMRGRPRLFGHHAGAKRVREIVEACPDLGVEYLTIFGFSTENWKR 71
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E++ L+ L + +++K +L+ ++++VR IG+R LD + ++ E E+ T G
Sbjct: 72 TQIEVAGLMSLFRRYIQKEARALRAHDVRVRFIGDRPGLDPKLQALMDELEELTAQCHGT 131
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL IA NY RDE++RA + + +D+ +G +C DVD + KYLDT +PDPDL+IRT G
Sbjct: 132 NLTIALNYGGRDEVARATRRLAEDVAAGRLCPGDVDVETLPKYLDTRVLPDPDLVIRTSG 191
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+FLLWQ AY+E+ FI WPDFS E+F + Y RDRR+GG+
Sbjct: 192 EARISNFLLWQSAYAEYEFIDTLWPDFSEEVFARLIASYAGRDRRYGGV 240
>gi|309805503|ref|ZP_07699548.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners
LactinV 09V1-c]
gi|309808823|ref|ZP_07702708.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners
LactinV 01V1-a]
gi|309809533|ref|ZP_07703391.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners
SPIN 2503V10-D]
gi|312875790|ref|ZP_07735782.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners
LEAF 2053A-b]
gi|325911845|ref|ZP_08174249.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners
UPII 143-D]
gi|329919857|ref|ZP_08276795.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners
SPIN 1401G]
gi|308165154|gb|EFO67392.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners
LactinV 09V1-c]
gi|308167949|gb|EFO70082.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners
LactinV 01V1-a]
gi|308170205|gb|EFO72240.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners
SPIN 2503V10-D]
gi|311088694|gb|EFQ47146.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners
LEAF 2053A-b]
gi|325476351|gb|EGC79513.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners
UPII 143-D]
gi|328936947|gb|EGG33377.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners
SPIN 1401G]
Length = 239
Score = 281 bits (720), Expect = 4e-74, Method: Composition-based stats.
Identities = 110/230 (47%), Positives = 147/230 (63%), Gaps = 3/230 (1%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA R LPR GHR G+ EI AA E+G+K LT++AFS NW RP
Sbjct: 10 HLAIIMDGNGRWAQERHLPRIIGHRSGMNKVKEIALAANELGVKVLTLYAFSTENWGRPR 69
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E++ L+KL +F K L+KNNIKV ++G L ++K+AE +T N G+ L
Sbjct: 70 DEVNYLMKLPINFFDKFMPELQKNNIKVNIMGFNDKLPLATAEIIKKAEQETADNDGMIL 129
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS---DVPDPDLIIRTG 189
AFNY SR EI+ AI I DI++ + ++ L++ YL T+ D DPDL+IRT
Sbjct: 130 NFAFNYGSRQEITAAISKIALDIQNKKIEVDSINEQLVSDYLMTAKFGDYADPDLLIRTS 189
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE+RLS+F+LWQ+AYSEF F YWPDF+ + F + +Y RDRRFG +
Sbjct: 190 GEERLSNFMLWQLAYSEFYFTKTYWPDFTTDEFKKIVEEYQHRDRRFGKI 239
>gi|291515265|emb|CBK64475.1| Undecaprenyl pyrophosphate synthetase [Alistipes shahii WAL 8301]
Length = 237
Score = 281 bits (720), Expect = 4e-74, Method: Composition-based stats.
Identities = 99/234 (42%), Positives = 138/234 (58%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
P H+ IIMDGNGRWA RG R GH G+E + AAA G+K LT++AFS
Sbjct: 4 QKRIPQHVAIIMDGNGRWAELRGKERYEGHAAGVEPVRASLRAAARWGVKYLTLYAFSTE 63
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP E+ L++L + L + ++VR+IG+R + + L AE+QT
Sbjct: 64 NWGRPAEEVDSLMELFCKSVVNETPELIRQGVEVRMIGDRSRFSEKVRSYLAMAEEQTAG 123
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
L L +A NYSSR EI+ A++ I Q +E+G + ++ I+ L T+ P+PDLI+
Sbjct: 124 GRTLTLILALNYSSRSEITHAVQQIAQRVEAGQIAPSEISEETISTALYTAPYPNPDLIV 183
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RT GE+RLS+FLLWQ +Y+E F WPDF+ E F A+ +Y RDRRFG +
Sbjct: 184 RTSGEQRLSNFLLWQASYAELWFPEVLWPDFTEEEFDRAMEEYARRDRRFGLVK 237
>gi|254172267|ref|ZP_04878943.1| undecaprenyl pyrophosphate synthetase 1 [Thermococcus sp. AM4]
gi|214034163|gb|EEB74989.1| undecaprenyl pyrophosphate synthetase 1 [Thermococcus sp. AM4]
Length = 264
Score = 281 bits (720), Expect = 4e-74, Method: Composition-based stats.
Identities = 90/240 (37%), Positives = 138/240 (57%), Gaps = 2/240 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + S + P H+ IIMDGN RWA P GH G EI+ E+GI+ LT+
Sbjct: 25 LFERVKSGNIPRHVAIIMDGNRRWARKLEKPPWYGHFFGSRKLEEILDWCRELGIRTLTV 84
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFS N++R E++ L+ L + K+ + + I+V V+G + L +++ +
Sbjct: 85 YAFSTENFKRSREEVTALMNLFEEKFKELIEDERVHRYGIRVNVLGRKELLPENVRKAAE 144
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
EAE TR L IA Y R EI+ A+K+I D+ +G + ++D LI +YL +
Sbjct: 145 EAERATRKYNNYTLNIALAYGGRSEIADAVKDIVNDVLAGRLKPEEIDEDLIKRYLYYPN 204
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+PDPD++IRTGGE R+S+FLL+Q+AYSE F+ Y+P+F + F + +Y R RRFG
Sbjct: 205 MPDPDIVIRTGGEVRISNFLLYQIAYSELFFVDVYFPEFRKIDFLRIIREYQKRQRRFGR 264
>gi|90580975|ref|ZP_01236776.1| putative undecaprenyl diphosphate synthase [Vibrio angustum S14]
gi|90437853|gb|EAS63043.1| putative undecaprenyl diphosphate synthase [Vibrio angustum S14]
Length = 253
Score = 281 bits (720), Expect = 4e-74, Method: Composition-based stats.
Identities = 95/240 (39%), Positives = 141/240 (58%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + + P+HI +IMDGNGRWA A+G R GH+ G+E + V+ A +GIK LT+FA
Sbjct: 8 AGLSADCLPNHIAVIMDGNGRWAKAKGKARVFGHKAGVEAVRKTVSTANRLGIKALTLFA 67
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP +E+S L++L + L + L KNNI++R+IG++ + + AE+
Sbjct: 68 FSSENWRRPEAEVSLLMELFMTVLSREVKRLHKNNIQLRIIGDKRRFSQRLQDKILAAEE 127
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTG+ L IA NY + +I A K + Q + + + L T +P+
Sbjct: 128 LTADNTGMVLNIAANYGGQWDILEAAKRLAQHAIDNELDLETLTEQDLESGLSTYGLPEV 187
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL+IRT GE R+S+F+LWQ AY+E F E+WPDF +A+ + R+RRFG ++
Sbjct: 188 DLLIRTSGECRISNFMLWQTAYAELFFTEEHWPDFDESSLLNAVAWFVTRERRFGCTGEQ 247
>gi|255262621|ref|ZP_05341963.1| undecaprenyl pyrophosphate synthetase 1 [Thalassiobium sp. R2A62]
gi|255104956|gb|EET47630.1| undecaprenyl pyrophosphate synthetase 1 [Thalassiobium sp. R2A62]
Length = 239
Score = 281 bits (720), Expect = 4e-74, Method: Composition-based stats.
Identities = 105/230 (45%), Positives = 151/230 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA +RG PR GH G + EIV ++G+K LTIFAFS NW+R
Sbjct: 9 PRHVAVIMDGNGRWAQSRGRPRLFGHHAGAKRVREIVNVCPKLGVKYLTIFAFSTENWKR 68
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
+E+S L+KL + ++++ L + ++VR IG+R+ LD+ ++ ++ + E T N +
Sbjct: 69 TQTEVSGLMKLFRRYIQREAQDLLREGVRVRFIGDRVRLDERLVRMMDDLELLTSDNDAV 128
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L IA NY RDE++RA K + D+E G + DV +AKYLDTS +PDPDL++RT G
Sbjct: 129 HLTIALNYGGRDEVARATKRLAYDVEQGRLSYKDVTDETLAKYLDTSVLPDPDLVVRTSG 188
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E R+S+FLLWQ AY+E+ FI WPDF+ F + +Y RDRRFG +
Sbjct: 189 EARISNFLLWQSAYAEYEFIDTLWPDFTEAEFAQVVGRYGARDRRFGAVK 238
>gi|227890233|ref|ZP_04008038.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus johnsonii
ATCC 33200]
gi|227849235|gb|EEJ59321.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus johnsonii
ATCC 33200]
Length = 239
Score = 281 bits (720), Expect = 4e-74, Method: Composition-based stats.
Identities = 98/236 (41%), Positives = 143/236 (60%), Gaps = 3/236 (1%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S P +H+ IIMDGNGRWA R LPR GHR G++ I AA ++GIK LT++AFS
Sbjct: 4 SKKPLNHLAIIMDGNGRWAKKRHLPRFVGHRHGMDNIRNIALAANKLGIKVLTLYAFSTE 63
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP E++ L++L F K L +NN++V ++G L + V ++A +T
Sbjct: 64 NWARPTDEVNYLMRLPIDFFDKFMPELMENNVRVNIMGFVDELPEKTYLVTQKAMAETAN 123
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP---DPD 183
NTG+ L AFNY S EI+ ++ I + ++ G + D+ +++ +L T + DPD
Sbjct: 124 NTGMVLNFAFNYGSHREITAGVQEIARKVKVGEIDIDDISEKMVSDHLLTHSLAPYEDPD 183
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
L+IRT GE+RLS+FLLWQ+AY+EF F + WPDF + + Y R+RRFG +
Sbjct: 184 LLIRTSGEERLSNFLLWQMAYTEFSFSDKLWPDFDKTDLEELVKDYQGRNRRFGKV 239
>gi|91784115|ref|YP_559321.1| undecaprenyl pyrophosphate synthetase [Burkholderia xenovorans
LB400]
gi|91688069|gb|ABE31269.1| Undecaprenyl pyrophosphate synthetase [Burkholderia xenovorans
LB400]
Length = 260
Score = 281 bits (720), Expect = 4e-74, Method: Composition-based stats.
Identities = 101/235 (42%), Positives = 142/235 (60%), Gaps = 1/235 (0%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
++ P HI IIMDGNGRWA R LPR AGH +G++ V A A G++ LT+FAFS N
Sbjct: 14 AAVPRHIAIIMDGNGRWATQRRLPRVAGHTRGVDAVRAAVEACARQGVEYLTLFAFSSEN 73
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+S L++L + L++ L N I++RV+G+ D I +++ AE +T N
Sbjct: 74 WRRPNDEVSFLMRLFVTALEREIGKLHANGIRLRVVGDLSRFDTRIRDLIRRAETKTARN 133
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T L L IA NY R +I +A + + + V A++L + P+PDL IR
Sbjct: 134 TRLTLTIAANYGGRWDIMQATRKLAEQSALAGKAVE-VTEESFAEHLSMAYAPEPDLFIR 192
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE+R+S+FLLWQ+AY+EF F +WPDF + HA+ Y R+RRFG S +
Sbjct: 193 TGGERRVSNFLLWQLAYTEFYFTDTFWPDFDADALGHAIASYAERERRFGRTSAQ 247
>gi|148360882|ref|YP_001252089.1| undecaprenyl diphosphate synthetase [Legionella pneumophila str.
Corby]
gi|296106052|ref|YP_003617752.1| undecaprenyl pyrophosphate synthetase [Legionella pneumophila
2300/99 Alcoy]
gi|148282655|gb|ABQ56743.1| undecaprenyl diphosphate synthetase [Legionella pneumophila str.
Corby]
gi|295647953|gb|ADG23800.1| undecaprenyl pyrophosphate synthetase [Legionella pneumophila
2300/99 Alcoy]
Length = 238
Score = 281 bits (720), Expect = 5e-74, Method: Composition-based stats.
Identities = 92/236 (38%), Positives = 143/236 (60%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M+ P HI ++MDGNGRWA +RGLPR GH+ G++ +I+ E I L++FAFS
Sbjct: 1 MNHKLPQHIAVVMDGNGRWAESRGLPRVEGHKAGLDSVKKIINCCLEKKISCLSLFAFSS 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RPV+E++ L++L L+K L ++ I+++ G+R L + + +AE T+
Sbjct: 61 ENWSRPVTEVNFLMELFLEALRKEIDDLNQHGIRLKFTGDREPLSQVLQKQMCDAEALTK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N L L + NY + +I A K + + G + +++ ++ A++LDTS +P+PDL
Sbjct: 121 NNQQLILNVVVNYGGKWDIVTAAKKLIHAVLDGKLACDEINEAVFAQFLDTSGMPEPDLF 180
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
IRT GE R+S+F LWQ+AY+E F +WPDF+ F AL + R RRFG +S+
Sbjct: 181 IRTSGELRISNFFLWQLAYTELYFTDVHWPDFNEHEFELALTSFAKRARRFGQISQ 236
>gi|315653425|ref|ZP_07906347.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners
ATCC 55195]
gi|315489350|gb|EFU78990.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners
ATCC 55195]
Length = 239
Score = 281 bits (720), Expect = 5e-74, Method: Composition-based stats.
Identities = 112/230 (48%), Positives = 146/230 (63%), Gaps = 3/230 (1%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA R LPR GHR G+ EI AA E+G+K LT++AFS NW RP
Sbjct: 10 HLAIIMDGNGRWAQERHLPRIIGHRSGMNKVKEIALAANELGVKVLTLYAFSTENWGRPR 69
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E++ L+KL +F K L+KNNIKV ++G L ++K+AE +T N G+ L
Sbjct: 70 DEVNYLMKLPINFFDKFMPELQKNNIKVNIMGFNDKLPLATAEIIKKAEQETADNDGMIL 129
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS---DVPDPDLIIRTG 189
AFNY SR EI+ AI I DI++ + ++ LI+ YL TS D DPDL+IRT
Sbjct: 130 NFAFNYGSRQEITAAISKIALDIQNKKIEVDSINEQLISDYLMTSKFGDYADPDLLIRTS 189
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE+RLS+F+LWQ+AYSEF F YWPDF+ F + +Y RDRRFG +
Sbjct: 190 GEERLSNFMLWQLAYSEFYFTKTYWPDFTTYEFKKIVEEYQHRDRRFGKI 239
>gi|82701794|ref|YP_411360.1| undecaprenyl diphosphate synthase [Nitrosospira multiformis ATCC
25196]
gi|82409859|gb|ABB73968.1| Undecaprenyl pyrophosphate synthetase [Nitrosospira multiformis
ATCC 25196]
Length = 265
Score = 281 bits (720), Expect = 5e-74, Method: Composition-based stats.
Identities = 94/236 (39%), Positives = 136/236 (57%), Gaps = 3/236 (1%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ P H+ IIMDGNGRWA R +PR AGH++G+E + A E G+K LT+FAFS
Sbjct: 14 TGEIPQHVAIIMDGNGRWAKNRFMPRMAGHKRGVETVRSAIRACMERGVKYLTLFAFSSE 73
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E++ L++L S L++ L +N I+ +VIG+ + I+ ++ E T
Sbjct: 74 NWRRPPEEVAFLMQLFISVLEQEVSKLHENGIRFKVIGDLSKFEPKIVEFIRNGEALTAA 133
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N L IA NY R +I +A++ + + + D + +Y + P+PDL I
Sbjct: 134 NERFTLTIAANYGGRWDIMQAVRKMLAECPHLATT---FDEKDLMQYFALNHAPEPDLFI 190
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGEKR+S+FLLWQ+AY+E F WPDF A+ Y R+RRFG S++
Sbjct: 191 RTGGEKRISNFLLWQLAYTELYFTDTLWPDFDARALDLAIQSYQQRERRFGRTSEQ 246
>gi|34497655|ref|NP_901870.1| undecaprenyl pyrophosphate synthetase [Chromobacterium violaceum
ATCC 12472]
gi|42559751|sp|Q7NVZ0|UPPS_CHRVO RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|34103511|gb|AAQ59873.1| undecaprenyl pyrophosphate synthetase [Chromobacterium violaceum
ATCC 12472]
Length = 251
Score = 281 bits (720), Expect = 5e-74, Method: Composition-based stats.
Identities = 99/233 (42%), Positives = 139/233 (59%), Gaps = 6/233 (2%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
PP HI IIMDGNGRWA R LPR AGH++G++ E+V A E+G+ LT+FAFS NWR
Sbjct: 15 PPRHIAIIMDGNGRWAKKRFLPRVAGHKRGLDAVREVVKACKEMGVGYLTLFAFSTENWR 74
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+S L+ L L+ L NNI+++V+G+R ++ + AE +T N G
Sbjct: 75 RPQEEVSFLMDLFLRALEHEVAKLHNNNIRLKVLGSRERFSAELSERIDRAEAKTAGNDG 134
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L IA +Y R +I A+ + + ++ ++ L + P+PDL IRTG
Sbjct: 135 LVLTIAADYGGRWDIVHAVNRLIAEGR------SEITEEMVTDRLGMAWAPEPDLFIRTG 188
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+R+S+FLLWQ+AYSE F WPDF R A++ Y R+RRFG S++
Sbjct: 189 GEQRISNFLLWQLAYSELYFTDLLWPDFDRAALQEAIHSYWQRERRFGRTSEQ 241
>gi|313901394|ref|ZP_07834868.1| Undecaprenyl pyrophosphate synthetase [Thermaerobacter subterraneus
DSM 13965]
gi|313468340|gb|EFR63780.1| Undecaprenyl pyrophosphate synthetase [Thermaerobacter subterraneus
DSM 13965]
Length = 297
Score = 281 bits (720), Expect = 5e-74, Method: Composition-based stats.
Identities = 99/232 (42%), Positives = 144/232 (62%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
P H+ IIMDGNGRWA RG PR AGHR G+E EIV A ++G++ LT++AFS N
Sbjct: 31 GRMPRHVAIIMDGNGRWAQRRGWPRVAGHRAGVESVREIVRFAGDIGLEVLTLYAFSTEN 90
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP +E+ L+ L+ +++ L +N +++RVIG+ L + A + TR N
Sbjct: 91 WRRPPAEVRALMGLLVEHIRRDLNELHRNGVQIRVIGDPAGLPALPRREVLRAVETTRHN 150
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+ L +A NY +R E++RA + + + G + +D +++A +L T+D+PDPDL+IR
Sbjct: 151 RRMVLVLALNYGARWELARAARLVAERAARGEIDPAAIDETVLAAHLQTADLPDPDLLIR 210
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE R+S+FLLWQ+AYSE F P WPDF A+ + R+RRFGGL
Sbjct: 211 PSGEWRISNFLLWQIAYSELWFTPVAWPDFRPVHLVEAIEDFARRERRFGGL 262
>gi|148656146|ref|YP_001276351.1| undecaprenyl diphosphate synthase [Roseiflexus sp. RS-1]
gi|148568256|gb|ABQ90401.1| Undecaprenyl pyrophosphate synthetase [Roseiflexus sp. RS-1]
Length = 236
Score = 281 bits (720), Expect = 5e-74, Method: Composition-based stats.
Identities = 102/236 (43%), Positives = 146/236 (61%), Gaps = 4/236 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+ P HI IIMDGNGRWA R LPR AGHR G E IV AE G++ LT++AFS N
Sbjct: 5 ARVPRHIAIIMDGNGRWARQRHLPRLAGHRAGTENIRRIVTECAEQGVQYLTLYAFSTEN 64
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP +E+ L++++ F+ + +L + ++R +G ++ ++ + +A + TR N
Sbjct: 65 WSRPSAEVDGLMRILSDFIDRETINLHREGARLRHLGRLENISAELRQKILDAIELTRHN 124
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T + L +AFNY R +I A++ + + V DV ++I+ +L T +PDPDLIIR
Sbjct: 125 TRITLAVAFNYGGRADIVDAVRELI----ALGVKPEDVTEAVISDHLSTRGMPDPDLIIR 180
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
T GE RLS+FL+WQ AYSE+ P YWPDFS E A+ Y R+RRFGGLS++
Sbjct: 181 TSGEWRLSNFLIWQAAYSEYWTTPVYWPDFSPEHLRQAIYDYGQRERRFGGLSEES 236
>gi|62422068|gb|AAX82616.1| putative undecaprenyl pyrophosphate synthetase [Lactobacillus
reuteri]
Length = 247
Score = 281 bits (720), Expect = 5e-74, Method: Composition-based stats.
Identities = 104/235 (44%), Positives = 152/235 (64%), Gaps = 3/235 (1%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P+HI IIMDGNGRWA R LPR AGH++G++ +I AA+E+G+K L+++AF
Sbjct: 13 QLDMERIPNHIAIIMDGNGRWAQKRHLPRVAGHKQGMQTVKKITIAASELGVKVLSLYAF 72
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP SE+S L++L F L K+N+KV V+G+ L + +K+A
Sbjct: 73 STENWKRPSSEVSYLMQLPVRFFSTFVPDLVKHNVKVTVMGDITQLPEATQKAVKDAMAD 132
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV---P 180
T TG+ L A NY SRDEI++A K I +D+++G++ D+D + KYL ++ +
Sbjct: 133 TAHCTGMILNFALNYGSRDEITQAAKEIAEDVQNGNLALADIDEASFGKYLMSAQLGQFA 192
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
DPDL+IRT GE+R+S+F+LWQ+AYSE F+PE+WPDF + A+ Y R RR
Sbjct: 193 DPDLLIRTSGEERISNFMLWQIAYSELEFVPEHWPDFDEDSLRSAIIAYQGRHRR 247
>gi|289192043|ref|YP_003457984.1| undecaprenyl diphosphate synthase [Methanocaldococcus sp. FS406-22]
gi|288938493|gb|ADC69248.1| undecaprenyl diphosphate synthase [Methanocaldococcus sp. FS406-22]
Length = 277
Score = 281 bits (720), Expect = 5e-74, Method: Composition-based stats.
Identities = 89/242 (36%), Positives = 140/242 (57%), Gaps = 4/242 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ S+ ++ P H+ IIMDGN R A G R GH G E +++ A ++GIK +T+
Sbjct: 36 LEESIDKNNLPKHVAIIMDGNRRAAEIYGRDRYYGHYLGAEKVRDVLRWARDLGIKVVTL 95
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFS N++RP E+ +L++L + + + + ++VR IG L ++ +K
Sbjct: 96 YAFSTENFKRPREEVDKLMELFEKKFYEIADDEEIHEYEVRVRAIGRIHLLPKNVQKAIK 155
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
AE++T+ + +A Y + EI A+K I + ++ G + D+D LI K+L T+D
Sbjct: 156 YAEERTKNYNKFFVNVAIAYGGQQEIIDAVKKIAEKVKRGEIKPEDIDKELIDKHLYTAD 215
Query: 179 V--PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
+ P+PDLIIRT GE+R+S+FL+WQ +YSE F YWP F R F A+ +Y R RRF
Sbjct: 216 LPFPNPDLIIRTSGEERISNFLIWQSSYSELYFCDIYWPLFRRVDFLRAVREYQRRQRRF 275
Query: 237 GG 238
G
Sbjct: 276 GK 277
>gi|320352946|ref|YP_004194285.1| Undecaprenyl pyrophosphate synthetase [Desulfobulbus propionicus
DSM 2032]
gi|320121448|gb|ADW16994.1| Undecaprenyl pyrophosphate synthetase [Desulfobulbus propionicus
DSM 2032]
Length = 249
Score = 281 bits (720), Expect = 5e-74, Method: Composition-based stats.
Identities = 93/233 (39%), Positives = 141/233 (60%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IIMDGNGRWA R PR GH+ G+E +V A +G++ LT++AFS NW
Sbjct: 13 IPRHVAIIMDGNGRWAEERHRPRLYGHKAGVESVRAVVETARSIGLEVLTLYAFSTENWN 72
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP +E++ L+ L+KS+L+ ++ N+I++ +G + L D+ +L++ D+TR G
Sbjct: 73 RPSTEVNGLMGLLKSYLQAELRTMLSNDIRLHCLGQQDRLPSDVRAILQQTIDETRCCQG 132
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ L +A +Y R EI A + + + + G + D+ S + +YL T+ DPDL+IRTG
Sbjct: 133 MILNLALSYGGRSEIVGAARELARQCQQGRLDWQDISESTLGEYLFTAGQSDPDLLIRTG 192
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE RLS+FLLWQ +Y+E F WPDF +E F A+ + R RRFG +
Sbjct: 193 GEHRLSNFLLWQASYAELYFTEVKWPDFRKEQFLEAIQTFQHRQRRFGKTGAQ 245
>gi|294507870|ref|YP_003571928.1| Undecaprenyl pyrophosphate synthetase [Salinibacter ruber M8]
gi|294344198|emb|CBH24976.1| Undecaprenyl pyrophosphate synthetase [Salinibacter ruber M8]
Length = 312
Score = 281 bits (720), Expect = 5e-74, Method: Composition-based stats.
Identities = 95/234 (40%), Positives = 141/234 (60%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
P H+ IMDGNGRWA RG R GH +G+ ++ A AE+GI LT++ FS N
Sbjct: 69 GELPAHVACIMDGNGRWAQERGEARVVGHHEGVTSVRDVTEACAELGIDYLTLYTFSTEN 128
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP +EI+ L++L+ +K+ +L +N ++++ IG+ L L++ + T N
Sbjct: 129 WERPDAEINALMELLVQTVKEERDTLMENGVRLQTIGDLSELPGSCQDALRQTKRDTAEN 188
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+ L +A +YS R EI RA + + +E G D+D++L + LDTS +PDPDL++R
Sbjct: 189 DRMTLTLALSYSGRWEIVRAARALATKVEEGECSPDDIDAALFEEQLDTSGMPDPDLLVR 248
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
TGGE RLS+FLLWQ AY+EF E+WP F R + ++ Y RDRRFG + +
Sbjct: 249 TGGEFRLSNFLLWQSAYTEFYITDEFWPAFRRPQLYASIRSYQDRDRRFGRIER 302
>gi|323526484|ref|YP_004228637.1| undecaprenyl diphosphate synthase [Burkholderia sp. CCGE1001]
gi|323383486|gb|ADX55577.1| undecaprenyl diphosphate synthase [Burkholderia sp. CCGE1001]
Length = 260
Score = 281 bits (720), Expect = 5e-74, Method: Composition-based stats.
Identities = 100/235 (42%), Positives = 142/235 (60%), Gaps = 1/235 (0%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
++ P HI IIMDGNGRWA R LPR AGH +G++ V A A G++ LT+FAFS N
Sbjct: 14 AAVPRHIAIIMDGNGRWATQRRLPRVAGHTRGVDAVRATVEACARQGVEYLTLFAFSSEN 73
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+S L++L + L++ L N I++RV+G+ D I +++ AE +T N
Sbjct: 74 WRRPNDEVSFLMRLFVTALEREIGKLHANGIRLRVVGDLERFDTRIRDLIRRAETKTARN 133
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T L L IA NY R +I +A + + + V+ A++L + P+PDL IR
Sbjct: 134 TRLTLTIAANYGGRWDIMQATRKLVEQAAQTGEAVE-VNEESFAEHLSMAYAPEPDLFIR 192
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE+R+S+FLLWQ+AY+EF F +WPDF + A+ Y R+RRFG S +
Sbjct: 193 TGGERRVSNFLLWQLAYTEFYFTDTFWPDFDADALGRAIASYGERERRFGRTSAQ 247
>gi|124515078|gb|EAY56589.1| Undecaprenyl diphosphate synthase [Leptospirillum rubarum]
Length = 264
Score = 281 bits (720), Expect = 5e-74, Method: Composition-based stats.
Identities = 91/233 (39%), Positives = 139/233 (59%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+PP H+ IIMDGNGRWA R +PR GHR G IV A I LT++AFS NW
Sbjct: 25 NPPRHVAIIMDGNGRWARKRHMPRIVGHRAGATAVRTIVTATRSWDIPYLTLYAFSWENW 84
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+ L+ L++ ++ + ++ + I+ V+G+R L + + AE +T+ N
Sbjct: 85 SRPRQEVDALMGLLEEYIDREIRTMMEREIRFFVVGDRARLPSPVRSKIAWAERETKDNG 144
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+ L +A +YS R+EI RA++ + +D+ + + ++ ++YL+TS +P PDL+IRT
Sbjct: 145 RMVLTLALSYSGREEIVRAVQRLAEDVRKERLAPDQISETVFSQYLETSILPPPDLLIRT 204
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
GE R+S+FLLWQ+AY+E F P WPDF + F A+ + R RRFG +
Sbjct: 205 SGEVRISNFLLWQLAYTEMYFTPTLWPDFGEDDFRQAIEDFQERRRRFGKADE 257
>gi|83592925|ref|YP_426677.1| undecaprenyl pyrophosphate synthetase [Rhodospirillum rubrum ATCC
11170]
gi|83575839|gb|ABC22390.1| Undecaprenyl pyrophosphate synthetase [Rhodospirillum rubrum ATCC
11170]
Length = 244
Score = 281 bits (719), Expect = 5e-74, Method: Composition-based stats.
Identities = 106/227 (46%), Positives = 157/227 (69%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA ARGLPR AGH++G E +V AA E+GI +LT+F FS NW+RP
Sbjct: 18 HVAIIMDGNGRWAHARGLPRTAGHKRGAESVRRVVEAAPELGISHLTLFGFSSENWKRPE 77
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
EIS+L+ L++ +L+ LK+N +++RVIG R DI+ ++++ E TR N L+L
Sbjct: 78 GEISDLMGLLRLYLRNEIRDLKRNGVRLRVIGRRERFSRDIVALIEDGESDTRDNDRLHL 137
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA NY R EI+ A + + +++ +G + +D ++ + L T D+PDPD+++RT GE+
Sbjct: 138 TIALNYGGRQEIADAARALAREVAAGRLDPEAIDEEVLGQRLLTDDLPDPDVLVRTSGEQ 197
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
R+S+FLLWQ+AYSE VF P WP+FSR+ A+ ++ R+RRFGG+
Sbjct: 198 RISNFLLWQIAYSELVFSPVLWPEFSRDDLAAAVADFHQRERRFGGV 244
>gi|167570367|ref|ZP_02363241.1| undecaprenyl diphosphate synthase [Burkholderia oklahomensis C6786]
Length = 260
Score = 281 bits (719), Expect = 5e-74, Method: Composition-based stats.
Identities = 99/236 (41%), Positives = 143/236 (60%), Gaps = 1/236 (0%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+++ P HI IIMDGNGRWA R LPR AGH +G++ +V A G++ LT+FAFS
Sbjct: 13 AAAVPRHIAIIMDGNGRWATERRLPRVAGHTRGVDAVRSVVEGCARAGVEYLTLFAFSSE 72
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+S L++L + L++ L N I++RV+G+ + I +++ AE +T
Sbjct: 73 NWRRPNDEVSFLMRLFITALEREVGKLHANGIRLRVVGDLSKFEPRIQALIRRAETKTAR 132
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NT L L IA NY R +I +A + + + + VD A++L + P+PDL I
Sbjct: 133 NTRLTLTIAANYGGRWDILQATQRLVDEAAREGRAAE-VDEDAFARHLAMAYAPEPDLFI 191
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE+R+S+FLLWQ+AY+E F ++WPDF AL Y R+RRFG S +
Sbjct: 192 RTGGEQRISNFLLWQLAYTELYFTDKFWPDFDANALAEALASYTHRERRFGRTSAQ 247
>gi|325267096|ref|ZP_08133765.1| di-trans,poly-cis-decaprenylcistransferase [Kingella denitrificans
ATCC 33394]
gi|324981449|gb|EGC17092.1| di-trans,poly-cis-decaprenylcistransferase [Kingella denitrificans
ATCC 33394]
Length = 259
Score = 281 bits (719), Expect = 5e-74, Method: Composition-based stats.
Identities = 98/233 (42%), Positives = 140/233 (60%), Gaps = 6/233 (2%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ +IMDGNGRWA R +PR GH+KG++V + G++ LT+FAFS NWR
Sbjct: 24 VPHHVAVIMDGNGRWAKKRFMPRVMGHKKGLDVLENMCRVCDRAGVRFLTVFAFSTENWR 83
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+S L+ L L+K + +NN+++RVIG+R + + + EAE TR NTG
Sbjct: 84 RPEDEVSFLMNLFLMALQKRVVKMHQNNMRLRVIGDRSRFSEAMRRSIDEAEAMTRGNTG 143
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L IA +Y R +I +A + + + S ++ L +DVP+PDL IRTG
Sbjct: 144 LTLTIAADYGGRWDILQAANALIAEGVQH------ITESDLSGKLMLADVPEPDLFIRTG 197
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE R+S+F+LWQ+AY+EF F WPDF E AL+ + R+RRFG S++
Sbjct: 198 GETRISNFMLWQMAYAEFYFTDTLWPDFDEEHIHRALSSFAQRERRFGRTSEQ 250
>gi|167837037|ref|ZP_02463920.1| undecaprenyl diphosphate synthase [Burkholderia thailandensis
MSMB43]
Length = 260
Score = 281 bits (719), Expect = 6e-74, Method: Composition-based stats.
Identities = 101/235 (42%), Positives = 142/235 (60%), Gaps = 1/235 (0%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
++ P HI IIMDGNGRWA R LPR AGH +G++ +V A G++ LT+FAFS N
Sbjct: 14 AAVPRHIAIIMDGNGRWATERRLPRVAGHTRGVDAVRSVVEGCARAGVEYLTLFAFSSEN 73
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+S L++L + L++ L N I++RVIG+ + I +++ AE +T N
Sbjct: 74 WRRPNDEVSFLMRLFITALEREVGKLHANGIRLRVIGDLTKFEPRIQALIRRAETKTARN 133
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T L L IA NY R +I +A + + + + VD A++L + P+PDL IR
Sbjct: 134 TRLTLTIAANYGGRWDILQATQKLIDEAAREGRAAE-VDEDAFARHLAMAYAPEPDLFIR 192
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE+R+S+FLLWQ+AY+EF F +WPDF AL Y R+RRFG S +
Sbjct: 193 TGGEQRISNFLLWQLAYTEFYFTDTFWPDFDAGALAEALASYTHRERRFGRTSAQ 247
>gi|83814114|ref|YP_445959.1| undecaprenyl diphosphate synthase [Salinibacter ruber DSM 13855]
gi|83755508|gb|ABC43621.1| undecaprenyl diphosphate synthase [Salinibacter ruber DSM 13855]
Length = 308
Score = 281 bits (719), Expect = 6e-74, Method: Composition-based stats.
Identities = 95/233 (40%), Positives = 141/233 (60%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
P H+ IMDGNGRWA RG R GH +G+ ++ A AE+GI LT++ FS N
Sbjct: 65 GELPAHVACIMDGNGRWAQERGEARVVGHHEGVTSVRDVTEACAELGIDYLTLYTFSTEN 124
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP +EI+ L++L+ +K+ +L +N ++++ IG+ L L++ + T N
Sbjct: 125 WERPDAEINALMELLVQTVKEERDTLMENGVRLQTIGDLSELPGSCQDALRQTKRDTAEN 184
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+ L +A +YS R EI RA +++ +E G D+D++L + LDTS +PDPDL++R
Sbjct: 185 DRMTLTLALSYSGRWEIVRAARDLATKVEEGECSPDDIDAALFEEQLDTSGMPDPDLLVR 244
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
TGGE RLS+FLLWQ AY+EF E+WP F R + ++ Y RDRRFG +
Sbjct: 245 TGGEFRLSNFLLWQSAYTEFYITDEFWPAFRRPQLYASIRSYQDRDRRFGRIE 297
>gi|149374433|ref|ZP_01892207.1| undecaprenyl diphosphate synthase [Marinobacter algicola DG893]
gi|149361136|gb|EDM49586.1| undecaprenyl diphosphate synthase [Marinobacter algicola DG893]
Length = 256
Score = 281 bits (719), Expect = 6e-74, Method: Composition-based stats.
Identities = 97/238 (40%), Positives = 143/238 (60%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + S P H+ IIMDGN RWA AR L AGH+ G++ +V A G++ LT+FAFS
Sbjct: 11 VSAGSRPRHVAIIMDGNNRWAKARRLKGVAGHKAGVKAVRSVVETCAREGVEVLTLFAFS 70
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRRP E+S L++L L++ L +N+I +R+IG+R + ++ ++ AE T
Sbjct: 71 SENWRRPEDEVSALMRLFLFALEREVKKLHRNDICLRIIGDRSAFSANLQEHMERAEALT 130
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
R NT + L IA NY +I++A + + + + SG + D+ LI +L D+P PDL
Sbjct: 131 RDNTRMTLVIAANYGGHWDITQASRRVAEKVRSGELAPSDITDDLIQHHLSIGDLPMPDL 190
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IRT GE+R+S+F+LW +AY+E F P YWPDF + AL Y R RRFG +
Sbjct: 191 MIRTAGEQRISNFMLWHLAYTELYFSPVYWPDFQEQEMGQALQAYAGRKRRFGQTDDQ 248
>gi|146281915|ref|YP_001172068.1| undecaprenyl diphosphate synthase [Pseudomonas stutzeri A1501]
gi|145570120|gb|ABP79226.1| undecaprenyl diphosphate synthase [Pseudomonas stutzeri A1501]
Length = 281
Score = 281 bits (719), Expect = 6e-74, Method: Composition-based stats.
Identities = 92/241 (38%), Positives = 142/241 (58%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
V + + P H+ IIMDGN RWA R LP AGH+ G++ ++ A+ G++ LT+F
Sbjct: 32 VRRIPGRNVPRHVAIIMDGNNRWAKRRLLPGVAGHKAGVDAVRAVIEVCADSGVEVLTLF 91
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E+ L++L S L++ L +N I++R+IG+R ++ + E E
Sbjct: 92 AFSSENWQRPADEVGALMELFLSALRREARKLDENGIRLRIIGDRSRFHPELQAAMSEVE 151
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ T N L +A NY + +I +A +++ + ++G + ++ +L YL T D+P
Sbjct: 152 EMTAANHRFVLQVAANYGGQWDILQAAQHLATEAQAGRLNPAEITPALFQSYLATGDMPL 211
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL IRTGGE+R+S+FLLWQ+AY+E F YWPDF AL + R RRFG +
Sbjct: 212 PDLCIRTGGERRISNFLLWQLAYAELYFSDLYWPDFKHVAMRKALADFATRQRRFGKTGE 271
Query: 242 K 242
+
Sbjct: 272 Q 272
>gi|330950677|gb|EGH50937.1| undecaprenyl diphosphate synthase [Pseudomonas syringae Cit 7]
Length = 251
Score = 281 bits (719), Expect = 6e-74, Method: Composition-based stats.
Identities = 93/241 (38%), Positives = 145/241 (60%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ M+ S P H+ IIMDGN RWA R LP AGH+ G++ ++ AE ++ LT+F
Sbjct: 4 IKPAMTPSVPRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAEARVEVLTLF 63
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E+ L++L + L++ L +N I +R+IG+R ++ ++EAE
Sbjct: 64 AFSSENWQRPAEEVGALMELFFTALRRETKRLNENEISLRIIGDRSRFHPELQAAMREAE 123
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T + L IA NY + +I++A + + +++++G + D+ L+ L T D+P
Sbjct: 124 VRTSGTSRFVLQIAANYGGQWDIAQAAQRLAREVQAGHLQPEDITPQLLQTCLATGDLPL 183
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL IRTGGE R+S+FLLWQ+AY+E F +WPDF + AL + R RRFG S+
Sbjct: 184 PDLCIRTGGEHRISNFLLWQLAYAELYFSDLFWPDFKHDAMRAALADFASRQRRFGKTSE 243
Query: 242 K 242
+
Sbjct: 244 Q 244
>gi|317484673|ref|ZP_07943574.1| di-trans,poly-cis-decaprenylcistransferase [Bilophila wadsworthia
3_1_6]
gi|316924029|gb|EFV45214.1| di-trans,poly-cis-decaprenylcistransferase [Bilophila wadsworthia
3_1_6]
Length = 244
Score = 281 bits (719), Expect = 6e-74, Method: Composition-based stats.
Identities = 97/238 (40%), Positives = 137/238 (57%), Gaps = 4/238 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ ++S P HI IIMDGNGRWA RGL R GH+ G+ IV +GI++LT++ FS
Sbjct: 9 IPAASLPAHIAIIMDGNGRWAQERGLSRSEGHKAGVRAAKAIVTECRTLGIRHLTLYTFS 68
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP E+S L +L+ SFL + S+++N I +RV G L L+ A ++T
Sbjct: 69 QENWGRPKDEVSLLFQLLVSFLGEELPSMERNGISLRVFGELDGLPLPARTALRHAMNRT 128
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ + + +A NYS R+EI RA + + Q V V L ++ PDPDL
Sbjct: 129 AKCSDMIVNLALNYSGREEILRAARLLMQQ----GVKPEAVTEEAFRSCLYSAGQPDPDL 184
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IIRT GE+R+S++L +Q AYSE F YWPDF+ E AL +Y R+RRFG ++
Sbjct: 185 IIRTSGEQRISNYLTFQSAYSELYFTSTYWPDFTPEALHRALVEYAGRNRRFGLTQEQ 242
>gi|326803583|ref|YP_004321401.1| di-trans,poly-cis-decaprenylcistransferase [Aerococcus urinae
ACS-120-V-Col10a]
gi|326651238|gb|AEA01421.1| di-trans,poly-cis-decaprenylcistransferase [Aerococcus urinae
ACS-120-V-Col10a]
Length = 246
Score = 281 bits (719), Expect = 6e-74, Method: Composition-based stats.
Identities = 103/234 (44%), Positives = 151/234 (64%), Gaps = 3/234 (1%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IIMDGNGRWA RGL R GH +G++ + AA+++G+K LT++AFS NW+
Sbjct: 13 IPQHVAIIMDGNGRWAKERGLKRTDGHHEGLKAIRRVAVAASQIGVKILTVYAFSTENWK 72
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP SE+S L+KL + L +NN++V+++GN+ S+ + ++ A D+T+ NTG
Sbjct: 73 RPRSEVSYLMKLPNLMEAELLPELIENNVQVKIMGNKGSVPKYTIQSIENAIDKTKDNTG 132
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT---SDVPDPDLII 186
L L IAFNY SR EI A+K I +++SG + +D I+ +L T + DPD +I
Sbjct: 133 LILNIAFNYGSRAEIVEAVKEIAGEVKSGYLNPDSIDEDTISHHLMTQQLAPYNDPDFLI 192
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
R+ GE RLS++LLWQ+AYSE FI WPDF +++F + +Y R RR+GGL
Sbjct: 193 RSSGEVRLSNYLLWQLAYSEMYFIDTKWPDFDKKIFLSCIGEYQSRQRRYGGLK 246
>gi|224540948|ref|ZP_03681487.1| hypothetical protein CATMIT_00099 [Catenibacterium mitsuokai DSM
15897]
gi|224526099|gb|EEF95204.1| hypothetical protein CATMIT_00099 [Catenibacterium mitsuokai DSM
15897]
Length = 247
Score = 281 bits (719), Expect = 6e-74, Method: Composition-based stats.
Identities = 93/238 (39%), Positives = 138/238 (57%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ P HI IMDGNGRWA R +PR GH +G + + A +G+K +T++AF
Sbjct: 10 TLDMDRIPAHIAFIMDGNGRWAKKRKMPRTYGHHEGTKTIRNLALEANNLGVKAMTVYAF 69
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S N++R SE+ + KL K F F L NN+++ IG+ + ++ +A +
Sbjct: 70 STENFKREQSEVDYIFKLPKEFFSLYFQELMDNNVRIMTIGHLELAPKETQDIINDAITK 129
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NTGL L AF Y RDEI A K I ++ + G V ++ +L T ++P D
Sbjct: 130 TKDNTGLKLVFAFIYGGRDEIVEATKAICEEYKEGKVSLDNITEDYFESHLMTKELPPVD 189
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
L+IR+ GE RLS+FLLWQ++Y+EF+F YWPDF+ E + +Y RDRR+GG+ K
Sbjct: 190 LMIRSSGECRLSNFLLWQLSYAEFIFDEAYWPDFNAEKLHECIWKYQNRDRRYGGVKK 247
>gi|167563184|ref|ZP_02356100.1| undecaprenyl diphosphate synthase [Burkholderia oklahomensis EO147]
Length = 260
Score = 281 bits (719), Expect = 6e-74, Method: Composition-based stats.
Identities = 97/236 (41%), Positives = 142/236 (60%), Gaps = 1/236 (0%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+++ P HI IIMDGNGRWA R LPR AGH +G++ +V A G++ LT+FAFS
Sbjct: 13 AAAVPRHIAIIMDGNGRWATERRLPRVAGHTRGVDAVRSVVEGCARAGVEYLTLFAFSSE 72
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+S L++L + L++ L N I++RV+G+ + I +++ AE +T
Sbjct: 73 NWRRPNDEVSFLMRLFITALEREVGKLHANGIRLRVVGDLSKFEPRIQALIRRAETKTAR 132
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NT L L IA NY R +I +A + + + + +D ++L + P+PDL I
Sbjct: 133 NTRLTLTIAANYGGRWDILQATQRLVDEAAREGRAAE-IDEDAFGRHLAMAYAPEPDLFI 191
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE+R+S+FLLWQ+AY+E F ++WPDF AL Y R+RRFG S +
Sbjct: 192 RTGGEQRISNFLLWQLAYTELYFTDKFWPDFDANALAEALASYTHRERRFGRTSAQ 247
>gi|187924429|ref|YP_001896071.1| undecaprenyl diphosphate synthase [Burkholderia phytofirmans PsJN]
gi|187715623|gb|ACD16847.1| undecaprenyl diphosphate synthase [Burkholderia phytofirmans PsJN]
Length = 260
Score = 281 bits (719), Expect = 6e-74, Method: Composition-based stats.
Identities = 102/235 (43%), Positives = 142/235 (60%), Gaps = 1/235 (0%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
++ P HI IIMDGNGRWA R LPR AGH +G++ V A A G++ LT+FAFS N
Sbjct: 14 AAVPRHIAIIMDGNGRWATQRRLPRVAGHTRGVDAVRATVEACARQGVEYLTLFAFSSEN 73
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+S L++L + L++ L N I++RV+G+ D I ++K AE +T N
Sbjct: 74 WRRPNEEVSFLMRLFVTALEREIGKLHANGIRLRVVGDLARFDTRIRDLIKRAETKTARN 133
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T L L IA NY R +I +A + + + V A++L + P+PDL IR
Sbjct: 134 TRLTLTIAANYGGRWDIMQATRKLAEQSALAGKAVE-VTEDSFAEHLSMAYAPEPDLFIR 192
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE+R+S+FLLWQ+AY+EF F +WPDF + HA+ Y R+RRFG S +
Sbjct: 193 TGGERRVSNFLLWQLAYTEFYFTDTFWPDFDADALGHAIASYAERERRFGRTSAQ 247
>gi|227486435|ref|ZP_03916751.1| undecaprenyl diphosphate synthase [Anaerococcus lactolyticus ATCC
51172]
gi|227235616|gb|EEI85631.1| undecaprenyl diphosphate synthase [Anaerococcus lactolyticus ATCC
51172]
Length = 231
Score = 281 bits (719), Expect = 6e-74, Method: Composition-based stats.
Identities = 88/235 (37%), Positives = 132/235 (56%), Gaps = 4/235 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M P+HI I++DGNGRWA + PR +GH++G E I A + G+K +T++AFS
Sbjct: 1 MTELKIPNHIAIVLDGNGRWAKKQNRPRTSGHKEGAENVVRIAKACKKFGVKTITLYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP +E+ L+ L+ F+ L + K+ +G+ L + A++ T
Sbjct: 61 TENWKRPATEVGFLMDLLIKFVNSKLKELIDEDCKLNFLGDLSKLPEKTRESCTYAKEIT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ N L + IA NY RDEI + K I + D+ LI+ L T+ + DPDL
Sbjct: 121 KDNKSLTVNIALNYGGRDEIVHSFKQIIEK----GYGKDDITEELISDNLYTAGLSDPDL 176
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IR GGE RLS+FL++Q+AY+E F WPDF+ + A+ Y RDRR+GG+
Sbjct: 177 LIRPGGEIRLSNFLIYQLAYTELYFTDVLWPDFTEDDLREAIIAYTKRDRRYGGI 231
>gi|53723735|ref|YP_103191.1| undecaprenyl diphosphate synthase [Burkholderia mallei ATCC 23344]
gi|121598838|ref|YP_993368.1| undecaprenyl diphosphate synthase [Burkholderia mallei SAVP1]
gi|124384785|ref|YP_001029195.1| undecaprenyl diphosphate synthase [Burkholderia mallei NCTC 10229]
gi|126448342|ref|YP_001080875.1| undecaprenyl diphosphate synthase [Burkholderia mallei NCTC 10247]
gi|167000554|ref|ZP_02266365.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia mallei
PRL-20]
gi|238562452|ref|ZP_00440475.2| di-trans,poly-cis-decaprenylcistransferase [Burkholderia mallei GB8
horse 4]
gi|254178729|ref|ZP_04885384.1| undecaprenyl diphosphate synthase [Burkholderia mallei ATCC 10399]
gi|254200143|ref|ZP_04906509.1| undecaprenyl diphosphate synthase [Burkholderia mallei FMH]
gi|254206481|ref|ZP_04912833.1| undecaprenyl diphosphate synthase [Burkholderia mallei JHU]
gi|254358110|ref|ZP_04974383.1| undecaprenyl diphosphate synthase [Burkholderia mallei 2002721280]
gi|52427158|gb|AAU47751.1| undecaprenyl diphosphate synthase [Burkholderia mallei ATCC 23344]
gi|121227648|gb|ABM50166.1| undecaprenyl diphosphate synthase [Burkholderia mallei SAVP1]
gi|124292805|gb|ABN02074.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia mallei
NCTC 10229]
gi|126241212|gb|ABO04305.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia mallei
NCTC 10247]
gi|147749739|gb|EDK56813.1| undecaprenyl diphosphate synthase [Burkholderia mallei FMH]
gi|147753924|gb|EDK60989.1| undecaprenyl diphosphate synthase [Burkholderia mallei JHU]
gi|148027237|gb|EDK85258.1| undecaprenyl diphosphate synthase [Burkholderia mallei 2002721280]
gi|160699768|gb|EDP89738.1| undecaprenyl diphosphate synthase [Burkholderia mallei ATCC 10399]
gi|238522668|gb|EEP86111.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia mallei GB8
horse 4]
gi|243063484|gb|EES45670.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia mallei
PRL-20]
Length = 260
Score = 281 bits (719), Expect = 6e-74, Method: Composition-based stats.
Identities = 97/235 (41%), Positives = 140/235 (59%), Gaps = 1/235 (0%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
++ P HI IIMDGNGRWA R LPR AGH +G++ +V A G++ LT+FAFS N
Sbjct: 14 AAVPRHIAIIMDGNGRWATERRLPRVAGHTRGVDAVRSVVEGCARAGVEYLTLFAFSSEN 73
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+S L++L + L++ L N I++RV+G+ + I +++ E +T N
Sbjct: 74 WRRPNDEVSFLMRLFITALEREVGKLHANGIRLRVVGDLTKFEPRIQALIRRGETKTARN 133
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T L L IA NY +I +A + + ++ +D A++L + P+PDL IR
Sbjct: 134 TRLTLTIAANYGGHWDILQATRKLVEEAAREGRAPE-IDEDAFARHLAMAYAPEPDLFIR 192
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE+R+S+FLLWQ+AY+EF F +WPDF AL Y R+RRFG S +
Sbjct: 193 TGGEQRISNFLLWQLAYTEFYFTDTFWPDFDAGALAEALASYTHRERRFGRTSAQ 247
>gi|15606475|ref|NP_213855.1| hypothetical protein aq_1248 [Aquifex aeolicus VF5]
gi|6136141|sp|O67291|UPPS_AQUAE RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|2983689|gb|AAC07254.1| hypothetical protein aq_1248 [Aquifex aeolicus VF5]
Length = 231
Score = 281 bits (718), Expect = 7e-74, Method: Composition-based stats.
Identities = 102/234 (43%), Positives = 146/234 (62%), Gaps = 6/234 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
MS P+H+ IIMDGNGRWA RGLPR AGH +G EV +I+ E+GIK+LT+FAFS
Sbjct: 1 MSLKLPEHVAIIMDGNGRWARQRGLPRVAGHYRGAEVAEDIIEYCIELGIKHLTLFAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+ L +L++++++ L ++VR+IG R L ++ +++E E ++
Sbjct: 61 ENWNRPKEEVKALFELMENYIRSKREKLYSLGVRVRLIGRRDRLSRGLVNLMEELESDSK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
L L +A +Y RD+I RA+K + V +D +++LD S PDPDL+
Sbjct: 121 DFKNLFLNVAIDYGGRDDILRAVK------KIMEVQPSKLDEETFSQFLDLSCSPDPDLL 174
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRT GEKR+S+FLLW +AY+E F WPDF+RE F AL Y+ R R+FG +
Sbjct: 175 IRTAGEKRISNFLLWNLAYTELYFTDTLWPDFTREEFMKALEDYSRRKRKFGRV 228
>gi|188533042|ref|YP_001906839.1| Undecaprenyl pyrophosphate synthetase [Erwinia tasmaniensis Et1/99]
gi|188028084|emb|CAO95941.1| Undecaprenyl pyrophosphate synthetase [Erwinia tasmaniensis Et1/99]
Length = 250
Score = 281 bits (718), Expect = 7e-74, Method: Composition-based stats.
Identities = 90/234 (38%), Positives = 140/234 (59%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ P H+ IIMDGNGRWA +G R +GH+ G++ V+ A + LT++AFS
Sbjct: 13 QGTGPRHVAIIMDGNGRWAKNQGKLRISGHKAGVKSVRRAVSFAVSRKLDALTLYAFSSE 72
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP E+ L++L L SL K+N+++++IG+ ++ + ++ AE+ T+
Sbjct: 73 NWNRPQQEVLALMELFVWALDSEVKSLHKHNVRLKIIGDISRFNNRLQERIRRAEELTQQ 132
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N GL L IA NY R +I ++ I + ++ G + ++ + +L +D+ DL+I
Sbjct: 133 NNGLTLNIAANYGGRWDIIHGVRKIAEQVQEGLLRPDQIEEETLGAHLCLNDMAPVDLVI 192
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RTGGE R+S+FLLWQVAY+EF F WPDF ++F ALN + R+RRFGG +
Sbjct: 193 RTGGEHRISNFLLWQVAYAEFWFTDTLWPDFDEQVFEGALNAFAQRERRFGGAT 246
>gi|212550574|ref|YP_002308891.1| undecaprenyl pyrophosphate synthetase [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212548812|dbj|BAG83480.1| undecaprenyl pyrophosphate synthetase [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 254
Score = 281 bits (718), Expect = 7e-74, Method: Composition-based stats.
Identities = 102/242 (42%), Positives = 152/242 (62%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + + P HI IIMDGNGRWA G+ R GH++GI +IV ++++GI+ LTI
Sbjct: 6 MKELIDTIRLPQHIAIIMDGNGRWALKNGMNRLQGHQEGIISIRKIVEVSSKIGIEYLTI 65
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW RP+ EIS L+ LI + G L KNNI+++VIG+ L L
Sbjct: 66 YTFSTENWDRPIEEISALMDLIVKTVHHGTNDLVKNNIRLQVIGDTKRLSQITRDSLGIC 125
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
++T N+GL L +A +YSS EI+ A++NI ++ G + ++D + + +L T+++P
Sbjct: 126 IEKTAQNSGLTLTLALSYSSHWEITEAVRNIAYKVKGGELDPENIDEKIFSAFLATNNIP 185
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
PDL+IRTGGE RLS++LLWQ+AY+E F P WP+F E F+ A+ + R+RRFG S
Sbjct: 186 SPDLLIRTGGEYRLSNYLLWQLAYTELYFTPICWPEFREENFYEAIYNFQRRERRFGKTS 245
Query: 241 KK 242
++
Sbjct: 246 EQ 247
>gi|170692146|ref|ZP_02883309.1| undecaprenyl diphosphate synthase [Burkholderia graminis C4D1M]
gi|170142576|gb|EDT10741.1| undecaprenyl diphosphate synthase [Burkholderia graminis C4D1M]
Length = 260
Score = 281 bits (718), Expect = 7e-74, Method: Composition-based stats.
Identities = 100/235 (42%), Positives = 143/235 (60%), Gaps = 1/235 (0%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
++ P HI IIMDGNGRWA R LPR AGH +G++ V A A G++ LT+FAFS N
Sbjct: 14 AAVPRHIAIIMDGNGRWATQRRLPRVAGHTRGVDAVRAAVEACARQGVEYLTLFAFSSEN 73
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+S L++L + L++ L N I++RV+G+ D I ++K AE +T N
Sbjct: 74 WRRPNDEVSFLMRLFVTALEREIGKLHANGIRLRVVGDLERFDARIRDLIKRAETKTARN 133
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+ L L IA NY R +I +A + + + +V+ A++L + P+PDL IR
Sbjct: 134 SRLTLTIAANYGGRWDIMQAT-RKLVEQAALAGKPVEVNEDSFAEHLSMAYAPEPDLFIR 192
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE+R+S+FLLWQ+AY+EF F +WPDF + A+ Y R+RRFG S +
Sbjct: 193 TGGERRVSNFLLWQLAYTEFYFTDTFWPDFDADALGRAIASYGERERRFGRTSAQ 247
>gi|148239867|ref|YP_001225254.1| undecaprenyl pyrophosphate synthetase [Synechococcus sp. WH 7803]
gi|147848406|emb|CAK23957.1| Undecaprenyl pyrophosphate synthetase [Synechococcus sp. WH 7803]
Length = 265
Score = 281 bits (718), Expect = 8e-74, Method: Composition-based stats.
Identities = 92/235 (39%), Positives = 137/235 (58%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ S P HI +IMDGNGRWA ARGLPR GHR G+E + + GI LT +AFS
Sbjct: 21 LDPSKLPGHIAVIMDGNGRWANARGLPRVMGHRAGVEALKTTLRLCNDWGIGALTAYAFS 80
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP E++ L+ L + L++ +L+ +++R +G+ +L + ++ +A ++T
Sbjct: 81 TENWSRPGEEVNFLMTLFERVLQRELNALESEQVRIRFLGDLEALPPRLQALIADATERT 140
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N G++ + NY R E+ RA + + + + SG + +D + +A L T DPDL
Sbjct: 141 ASNRGIHFNVCTNYGGRRELVRASRRLAERVASGELQPSQIDENALAAELYTVGERDPDL 200
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE+R+S+FLLWQ+AY+E WPDF + AL Y R RRFGGL
Sbjct: 201 LIRTSGEQRISNFLLWQLAYAEIHVTEVCWPDFGADALLSALTDYQSRRRRFGGL 255
>gi|126726887|ref|ZP_01742726.1| undecaprenyl diphosphate synthase [Rhodobacterales bacterium
HTCC2150]
gi|126703845|gb|EBA02939.1| undecaprenyl diphosphate synthase [Rhodobacterales bacterium
HTCC2150]
Length = 238
Score = 281 bits (718), Expect = 8e-74, Method: Composition-based stats.
Identities = 102/231 (44%), Positives = 151/231 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA +G PR GH+ G EIV A ++G++ ++IFAFS NW+R
Sbjct: 8 PNHVAIIMDGNGRWAVQKGRPRLFGHQAGARRVREIVEACPDLGVRYVSIFAFSTENWKR 67
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
+E++ L+ L + ++ K + ++VR IG+R+ LD + ++ E E+ T+ NT
Sbjct: 68 TQTEVAGLMALFRRYIAKEMQEFMRQGVRVRFIGDRIKLDRKLRELMDEVEELTKANTLT 127
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L IA NY RDE++RA + + +D+ G + VD + +A+YLDT +PDPDL+IRT G
Sbjct: 128 DLTIALNYGGRDEVARASRRMARDVALGKIDPETVDETTLARYLDTCFLPDPDLVIRTSG 187
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E R+S+FLLWQ AY+E+ FI WPDF+ E+F + QY R RRFG +S
Sbjct: 188 EARISNFLLWQSAYAEYEFIDTLWPDFTPEIFQGLIEQYAGRSRRFGAVSA 238
>gi|296158900|ref|ZP_06841728.1| undecaprenyl diphosphate synthase [Burkholderia sp. Ch1-1]
gi|295890775|gb|EFG70565.1| undecaprenyl diphosphate synthase [Burkholderia sp. Ch1-1]
Length = 260
Score = 281 bits (718), Expect = 8e-74, Method: Composition-based stats.
Identities = 102/235 (43%), Positives = 142/235 (60%), Gaps = 1/235 (0%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
++ P HI IIMDGNGRWA R LPR AGH +G++ V A A G++ LT+FAFS N
Sbjct: 14 AAVPRHIAIIMDGNGRWATQRRLPRVAGHTRGVDAVRAAVEACALRGVEYLTLFAFSSEN 73
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+S L++L + L++ L N I++RV+G+ D I ++K AE +T N
Sbjct: 74 WRRPNDEVSFLMRLFVTALEREIGKLHANGIRLRVVGDLSRFDTRIRDLIKRAETKTARN 133
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T L L IA NY R +I +A + + + V A++L + P+PDL IR
Sbjct: 134 TRLTLTIAANYGGRWDIMQATRKLAEQSALAGKAVE-VTEESFAEHLSMAYAPEPDLFIR 192
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE+R+S+FLLWQ+AY+EF F +WPDF + HA+ Y R+RRFG S +
Sbjct: 193 TGGERRVSNFLLWQLAYTEFYFTDTFWPDFDADALGHAIASYAERERRFGRTSAQ 247
>gi|254431931|ref|ZP_05045634.1| di-trans,poly-cis-decaprenylcistransferase [Cyanobium sp. PCC 7001]
gi|197626384|gb|EDY38943.1| di-trans,poly-cis-decaprenylcistransferase [Cyanobium sp. PCC 7001]
Length = 258
Score = 281 bits (718), Expect = 8e-74, Method: Composition-based stats.
Identities = 87/239 (36%), Positives = 134/239 (56%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ A + + P H+ +IMDGNGRWA RGLPR GHR+G+E + ++ G+ LT
Sbjct: 16 LPAGLDPARLPSHVAVIMDGNGRWARRRGLPRVMGHREGVEALKRTLRLCSDWGVGALTA 75
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP E++ L+ L + L++ L++ +++ +G+ L + ++ +A
Sbjct: 76 YAFSTENWNRPGEEVNFLMALFERVLEREIEGLEREQVRISFLGDLEPLPHRLQHLIADA 135
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+T N G+ + NY R E+ RA + + + G + +D A L T+
Sbjct: 136 TVRTAGNGGIRFNVCTNYGGRAELVRAARRLAERAARGELDPASIDEGCFAAELHTAGQL 195
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRT GE+R+S+FLLWQ+AY+E WPDF+ E AL Y R RRFGG+
Sbjct: 196 DPDLLIRTSGEQRISNFLLWQLAYAELHITEVLWPDFNAEALLSALLDYQNRQRRFGGV 254
>gi|194477241|ref|YP_002049420.1| Undecaprenyl pyrophosphate synthetase (UPPS) [Paulinella
chromatophora]
gi|171192248|gb|ACB43210.1| Undecaprenyl pyrophosphate synthetase (UPPS) [Paulinella
chromatophora]
Length = 254
Score = 281 bits (718), Expect = 8e-74, Method: Composition-based stats.
Identities = 89/240 (37%), Positives = 133/240 (55%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ A + P HI +IMDGNGRWA RGLPR GHR G+E ++ ++ G+ LT
Sbjct: 15 LPAGLDHIRMPSHIAVIMDGNGRWAQRRGLPRIMGHRAGVEALKRTLSLCSDWGVSALTA 74
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP E+ L+ L + L++ +L++ + +R +G+ L + ++ A
Sbjct: 75 YAFSTENWNRPYEEVGFLMSLFERVLERELEALERAKVCIRFLGDLEVLPLRLQELIASA 134
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
++T N G+ + NY R E+ +A + + + G + +D + L T+
Sbjct: 135 TERTADNKGIRFNVCINYGGRRELVKAAQILAERARIGKLDPETIDEACFEAELHTAGES 194
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GE RLS+FLLWQ+AYSE WPDF+RE AL + R RRFGG+
Sbjct: 195 DPDLLIRTSGEMRLSNFLLWQLAYSEIHITDMLWPDFNREALVLALEDFQRRQRRFGGVE 254
>gi|15669562|ref|NP_248375.1| hypothetical protein MJ_1372 [Methanocaldococcus jannaschii DSM
2661]
gi|2501569|sp|Q58767|UPPS_METJA RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|1592017|gb|AAB99380.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
2661]
Length = 280
Score = 281 bits (718), Expect = 8e-74, Method: Composition-based stats.
Identities = 89/242 (36%), Positives = 137/242 (56%), Gaps = 4/242 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ ++ + P H+ IIMDGN R A G R GH G E E++ A ++GI +T+
Sbjct: 39 LEEAIDKDNLPKHVAIIMDGNRRAAEIYGKDRYYGHYLGAEKVREVLRWARDLGINVVTL 98
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFS N+RRP E+ +L++L + + + + ++VR IG L ++ +K
Sbjct: 99 YAFSTENFRRPKEEVDKLMELFEKKFYEIADDEEIHRYEVRVRAIGRINLLPKNVQKAIK 158
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
AE++T+ + IA Y + EI A+K I + ++ G + D+D LI K+L T++
Sbjct: 159 YAEERTKNYNKFFVNIAIAYGGQQEIIDAVKKIAEKVKRGEIEPEDIDKELIDKHLYTAN 218
Query: 179 V--PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
+ P+PDLIIRT GE+R+S+FL+WQ +YSE F YWP F R F A+ Y R RRF
Sbjct: 219 LPFPNPDLIIRTSGEERISNFLIWQSSYSELYFCDIYWPLFRRVDFLRAVRDYQRRQRRF 278
Query: 237 GG 238
G
Sbjct: 279 GK 280
>gi|94968445|ref|YP_590493.1| undecaprenyl pyrophosphate synthetase [Candidatus Koribacter
versatilis Ellin345]
gi|94550495|gb|ABF40419.1| Undecaprenyl pyrophosphate synthetase [Candidatus Koribacter
versatilis Ellin345]
Length = 267
Score = 281 bits (718), Expect = 8e-74, Method: Composition-based stats.
Identities = 100/242 (41%), Positives = 144/242 (59%), Gaps = 2/242 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + + P HI IIMDGNGRWA R LPR AGHR G+ V A+ +GI +T+
Sbjct: 16 LYSRLDPARFPRHIAIIMDGNGRWAKRRHLPRIAGHRSGVFAVRNTVQCASRIGIPAMTL 75
Query: 61 FAFSINNW-RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
+AFS+ NW RRP +E+S L+ L++ +LK S +NN++V+ IG L ++ +
Sbjct: 76 YAFSVENWLRRPKTEVSFLMGLLRRYLKIEMSSFHENNVRVQFIGRWRELPVEVQERMDW 135
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSH-DVDSSLIAKYLDTSD 178
A ++T NTGL L A NY R EI A+K++ +H D++ I +++ TS
Sbjct: 136 AIEETANNTGLTLTFAINYGGRSEIVDAVKSMINAARRNGGLNHLDINEESIDQHMYTSQ 195
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+P+ DL+IRT GE RLS+FLLWQ AYSE WPDFS A+ ++ R+RRFGG
Sbjct: 196 LPELDLLIRTSGEMRLSNFLLWQAAYSEIYVTETLWPDFSGVKLLEAIAEFQKRERRFGG 255
Query: 239 LS 240
+
Sbjct: 256 IE 257
>gi|291459116|ref|ZP_06598506.1| di-trans,poly-cis-decaprenylcistransferase [Oribacterium sp. oral
taxon 078 str. F0262]
gi|291418370|gb|EFE92089.1| di-trans,poly-cis-decaprenylcistransferase [Oribacterium sp. oral
taxon 078 str. F0262]
Length = 261
Score = 281 bits (718), Expect = 8e-74, Method: Composition-based stats.
Identities = 102/240 (42%), Positives = 142/240 (59%), Gaps = 3/240 (1%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ P HI II+DGNGRWA RGLPR GH+KG E IV A +GI LT++
Sbjct: 1 MREQREGEEPAHIAIILDGNGRWAKRRGLPRAMGHKKGCETLERIVEDCARLGISYLTVY 60
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
FS NW+RP E++ L++L + ++KK +NN++ R+IG+R DI +++ E
Sbjct: 61 GFSTENWKRPPEEVAALMQLFRIYMKKLIKVANENNVRARMIGSREGFARDIREGIEDLE 120
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV---DSSLIAKYLDTSD 178
+T NTG+ A NY SRDEI RA+K S ++ ++ LDT+
Sbjct: 121 RETAKNTGMCFVFAVNYGSRDEIIRAVKKYTIQALSEGRSREEIESLTEDDFSRLLDTAG 180
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+PDPDL+IRT GE RLS++LLWQ AYSE+ P WPDF +E A++ + R+RRFGG
Sbjct: 181 MPDPDLVIRTSGEFRLSNYLLWQCAYSEYYISPVLWPDFDKEELLRAIDSFRKRERRFGG 240
>gi|257894709|ref|ZP_05674362.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium
1,231,408]
gi|257831088|gb|EEV57695.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium
1,231,408]
Length = 237
Score = 281 bits (718), Expect = 8e-74, Method: Composition-based stats.
Identities = 101/228 (44%), Positives = 142/228 (62%), Gaps = 4/228 (1%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA R LPR AGH++G+E ++ A+ +G+K LT++AFS NW+RP E+S
Sbjct: 1 MDGNGRWAQNRRLPRVAGHKEGMETVKKVTKKASRLGVKVLTLYAFSTENWKRPKDEVSF 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L F L K N+KV V+G L + ++ A +QT+ NTG+ L A N
Sbjct: 61 LMQLPVDFFDTFVPELIKENVKVHVMGYENVLPEHTQDAVRRAIEQTKNNTGMVLNFALN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLIIRTGGEKR 193
Y SR EI A++ I +++ G + + ++D LIAK+L T +P DP+L+IRT GE+R
Sbjct: 121 YGSRAEIVTAVQEIAEEVAKGEIHAEEIDDELIAKHLMTGFLPKELQDPELMIRTSGEER 180
Query: 194 LSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
+S+FLLWQ+AYSE F WPDF A+ Y RDRRFGG+ K
Sbjct: 181 ISNFLLWQIAYSELYFTKALWPDFDGAHLEEAIASYQNRDRRFGGVKK 228
>gi|83720615|ref|YP_442555.1| undecaprenyl diphosphate synthase [Burkholderia thailandensis E264]
gi|167581482|ref|ZP_02374356.1| undecaprenyl diphosphate synthase [Burkholderia thailandensis
TXDOH]
gi|167619592|ref|ZP_02388223.1| undecaprenyl diphosphate synthase [Burkholderia thailandensis Bt4]
gi|257138764|ref|ZP_05587026.1| undecaprenyl diphosphate synthase [Burkholderia thailandensis E264]
gi|83654440|gb|ABC38503.1| undecaprenyl diphosphate synthase [Burkholderia thailandensis E264]
Length = 260
Score = 281 bits (718), Expect = 8e-74, Method: Composition-based stats.
Identities = 100/235 (42%), Positives = 143/235 (60%), Gaps = 1/235 (0%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
++ P HI IIMDGNGRWA R LPR AGH +G++ +V A G++ LT+FAFS N
Sbjct: 14 AAVPRHIAIIMDGNGRWATERRLPRVAGHTRGVDAVRSVVEGCARSGVEYLTLFAFSSEN 73
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+S L++L + L++ L N I++RVIG+ + I +++ AE +T N
Sbjct: 74 WRRPNDEVSFLMRLFITALEREVGKLHANGIRLRVIGDLTKFEPRIQALIRRAETKTARN 133
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T L L IA NY R +I +A + + ++ + +D A++L + P+PDL IR
Sbjct: 134 TRLTLTIAANYGGRWDILQATRKLVEEAAREGRAAE-IDEDAFARHLAMAYAPEPDLFIR 192
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE+R+S+FLLWQ+AY+EF F +WPDF AL Y R+RRFG S +
Sbjct: 193 TGGEQRISNFLLWQLAYTEFYFTDTFWPDFDAGALAEALASYTHRERRFGRTSAQ 247
>gi|42519368|ref|NP_965298.1| undecaprenyl pyrophosphate synthetase [Lactobacillus johnsonii NCC
533]
gi|268319255|ref|YP_003292911.1| undecaprenyl diphosphate synthase [Lactobacillus johnsonii FI9785]
gi|73920263|sp|Q74IR9|UPPS_LACJO RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|41583656|gb|AAS09264.1| undecaprenyl pyrophosphate synthetase [Lactobacillus johnsonii NCC
533]
gi|262397630|emb|CAX66644.1| undecaprenyl diphosphate synthase [Lactobacillus johnsonii FI9785]
gi|329667113|gb|AEB93061.1| undecaprenyl pyrophosphate synthetase [Lactobacillus johnsonii DPC
6026]
Length = 239
Score = 281 bits (718), Expect = 9e-74, Method: Composition-based stats.
Identities = 99/236 (41%), Positives = 144/236 (61%), Gaps = 3/236 (1%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S P +H+ IIMDGNGRWA R LPR GHR G++ I AA ++GIK LT++AFS
Sbjct: 4 SKKPLNHLAIIMDGNGRWAKKRHLPRFVGHRHGMDNIRNIALAANKLGIKVLTLYAFSTE 63
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP E++ L++L F K L +NN++V ++G L + V ++A +T
Sbjct: 64 NWARPTDEVNYLMRLPIDFFDKFMPELMENNVRVNIMGFVDELPEKTYLVTQKAMAETAN 123
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP---DPD 183
NTG+ L AFNY SR EI+ ++ I + ++ G + D+ +++ +L T + DPD
Sbjct: 124 NTGMVLNFAFNYGSRREITAGVQEIARKVKVGEIDIDDISEKMVSDHLLTHSLAPYEDPD 183
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
L+IRT GE+RLS+FLLWQ+AY+EF F + WPDF + + Y R+RRFG +
Sbjct: 184 LLIRTSGEERLSNFLLWQMAYTEFSFSDKLWPDFDKTDLEELVKDYQGRNRRFGKV 239
>gi|239979353|ref|ZP_04701877.1| undecaprenyl diphosphate synthase [Streptomyces albus J1074]
Length = 276
Score = 281 bits (718), Expect = 9e-74, Method: Composition-based stats.
Identities = 86/239 (35%), Positives = 136/239 (56%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P H+ ++MDGNGRWA RGLPR GH+ G V +++ E+G+KNL+++AF
Sbjct: 28 KIPGELVPGHVAVVMDGNGRWAKERGLPRTEGHKVGEGVVMDVLKGCLEMGVKNLSLYAF 87
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + + + + I++R +G L ++ L+ A++Q
Sbjct: 88 STENWKRSPEEVRFLMNFNRDVIARRRDEMDALGIRIRWVGRMPKLWKSVVQELQIAQEQ 147
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N + L+ NY R EI+ A + + +D+ +G + V + KYL D+PD D
Sbjct: 148 TKDNDAMTLYFCVNYGGRAEIADAARRMAEDVAAGRLDPSKVGEKTLQKYLYYPDMPDVD 207
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L +R GE+R S++L+WQ AY+E VF WPDF R + A +Y RDRRFGG ++
Sbjct: 208 LFVRPSGEQRTSNYLIWQSAYAEMVFQDVLWPDFDRRDLWRACLEYAQRDRRFGGAVEE 266
>gi|237745599|ref|ZP_04576079.1| undecaprenyl pyrophosphate synthetase [Oxalobacter formigenes
HOxBLS]
gi|229376950|gb|EEO27041.1| undecaprenyl pyrophosphate synthetase [Oxalobacter formigenes
HOxBLS]
Length = 247
Score = 281 bits (718), Expect = 9e-74, Method: Composition-based stats.
Identities = 95/235 (40%), Positives = 133/235 (56%), Gaps = 4/235 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+ P HI I+MDGNGRWA R LPR AGH +G E + I LT+FAFS N
Sbjct: 14 APMPRHIAIVMDGNGRWAKKRFLPRVAGHVRGTEAIRRTIEGCIVRHIPYLTVFAFSSEN 73
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP E+ L+ L S L+K L N+I+++V+G+ D + + AE++T N
Sbjct: 74 WNRPNEEVGFLMNLFLSTLEKETEKLHANHIRLKVVGDTGRFDPALQKAIARAEEKTSAN 133
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+ L L + NY + +I +A++ + Q+ V D+ +A L S P PDL IR
Sbjct: 134 SALTLTVCANYGGQWDIVQAVRRLRQE----GVLEKDMTEKDLASRLALSYAPHPDLFIR 189
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGEKRLS+FLLWQ+AY+E F YWPDF + A+ + R+RRFG S++
Sbjct: 190 TGGEKRLSNFLLWQLAYTELYFTETYWPDFDDKELEKAILAFQGRERRFGKTSEQ 244
>gi|259501579|ref|ZP_05744481.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners DSM
13335]
gi|302191447|ref|ZP_07267701.1| undecaprenyl pyrophosphate synthase [Lactobacillus iners AB-1]
gi|325913508|ref|ZP_08175874.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners
UPII 60-B]
gi|259167097|gb|EEW51592.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners DSM
13335]
gi|325477277|gb|EGC80423.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners
UPII 60-B]
Length = 239
Score = 281 bits (718), Expect = 9e-74, Method: Composition-based stats.
Identities = 109/230 (47%), Positives = 146/230 (63%), Gaps = 3/230 (1%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA R LPR GHR G+ EI A E+G+K LT++AFS NW RP
Sbjct: 10 HLAIIMDGNGRWAQERHLPRIIGHRSGMNKVKEIALVANELGVKVLTLYAFSTENWGRPR 69
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E++ L+KL +F K L+KNNIKV ++G L ++K+AE +T N G+ L
Sbjct: 70 DEVNYLMKLPINFFDKFMPELQKNNIKVNIMGFNDKLPLATAEIIKKAEQETADNDGMIL 129
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS---DVPDPDLIIRTG 189
AFNY SR EI+ AI I DI++ + ++ L++ YL T+ D DPDL+IRT
Sbjct: 130 NFAFNYGSRQEITAAISKIALDIQNKKIEVDSINEQLVSDYLMTAKFGDYADPDLLIRTS 189
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE+RLS+F+LWQ+AYSEF F YWPDF+ + F + +Y RDRRFG +
Sbjct: 190 GEERLSNFMLWQLAYSEFYFTKTYWPDFTTDEFKKIVEEYQHRDRRFGKI 239
>gi|313886511|ref|ZP_07820227.1| di-trans,poly-cis-decaprenylcistransferase [Porphyromonas
asaccharolytica PR426713P-I]
gi|312924057|gb|EFR34850.1| di-trans,poly-cis-decaprenylcistransferase [Porphyromonas
asaccharolytica PR426713P-I]
Length = 238
Score = 280 bits (717), Expect = 9e-74, Method: Composition-based stats.
Identities = 102/236 (43%), Positives = 142/236 (60%), Gaps = 1/236 (0%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
MM P HI IIMDGNGRWA R L R GH++G +V + ++A A+ GI LT++AFS
Sbjct: 1 MMKQQTPQHIAIIMDGNGRWAQRRDLSRSYGHKQGTDVLEKTLSAVADRGIPYLTVYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP SE++ +++L+ L + K +++R IG+ L L+++ +QT
Sbjct: 61 TENWSRPESEVNYIMELLAKALHEYTPRFIKEGVRLRAIGDIDQLPAQTAAQLRDSMEQT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVD-SSLIAKYLDTSDVPDPD 183
+ + L IA +YSS E+S AI++I D++SG + S D+ LI YL TS +P PD
Sbjct: 121 KDGQRITLCIALSYSSYTEVSHAIRHIVADVQSGRLSSDDLSRPELINDYLYTSGMPMPD 180
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
L+IRTGGE+RLS+FLL Q AY+E F WPDF AL Y R RRFG +
Sbjct: 181 LLIRTGGEQRLSNFLLLQSAYTELYFTDTLWPDFDEAELDKALADYASRQRRFGKV 236
>gi|188994162|ref|YP_001928414.1| putative undecaprenyl diphosphate synthase [Porphyromonas
gingivalis ATCC 33277]
gi|188593842|dbj|BAG32817.1| putative undecaprenyl diphosphate synthase [Porphyromonas
gingivalis ATCC 33277]
Length = 254
Score = 280 bits (717), Expect = 9e-74, Method: Composition-based stats.
Identities = 97/233 (41%), Positives = 144/233 (61%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI ++MDGNGRWA RG RC GH G++ + AAA G++ LT + FS NW
Sbjct: 14 VPRHIALVMDGNGRWAKIRGKERCEGHAAGVDALRVALRAAAGCGVEYLTAYTFSTENWN 73
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ L+ L + + L NNI++ IG+ L +D+ L++ +T NTG
Sbjct: 74 RPEEEVRALMGLFVTAIMNEMLDLMTNNIRLLAIGDFSRLPEDVRESLEKGIRETAGNTG 133
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L +A +YSSR E++ AI+ + + + GSV D++ L++ +L T+ +PDPDL IRTG
Sbjct: 134 LTLVLALSYSSRWEMTDAIRRLARKVRDGSVEPEDINVDLVSDHLSTAGIPDPDLFIRTG 193
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GEKR+S+FL+WQ+AY+E F WPDF + A+ +Y+ R+RRFG S++
Sbjct: 194 GEKRISNFLMWQMAYTELFFTDTLWPDFDADCLKAAIEEYSSRERRFGKTSEQ 246
>gi|323137308|ref|ZP_08072386.1| undecaprenyl diphosphate synthase [Methylocystis sp. ATCC 49242]
gi|322397295|gb|EFX99818.1| undecaprenyl diphosphate synthase [Methylocystis sp. ATCC 49242]
Length = 258
Score = 280 bits (717), Expect = 9e-74, Method: Composition-based stats.
Identities = 113/233 (48%), Positives = 153/233 (65%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+ P H+ +IMDGNGRWAAARGLPR GHR+G+E V A ++ I LT+++FS N
Sbjct: 17 GAAPRHVALIMDGNGRWAAARGLPRFEGHRRGVEALRRAVRGAIDLKISYLTVYSFSAEN 76
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP E+ L+ L+ F++ L NN++VRVIG R L +I +L+EAE T+ N
Sbjct: 77 WARPREEVQSLLGLLHRFIRNDLAELHGNNVRVRVIGARADLAPEIADLLREAEQVTQAN 136
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
TGL L +AFNY +R EI+ A + + + + G + +D+ IA LDT+D+PDPDLIIR
Sbjct: 137 TGLTLVVAFNYGARQEIAAAARALAEMVAEGRLDPEKIDADAIAARLDTADIPDPDLIIR 196
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
T GE+RLS+FLLWQ AY+EFVF+P WPDF A+ +Y RDRRFG +
Sbjct: 197 TSGEQRLSNFLLWQAAYAEFVFLPILWPDFDHAALVAAIAEYKHRDRRFGRVQ 249
>gi|329119072|ref|ZP_08247764.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria bacilliformis
ATCC BAA-1200]
gi|327464811|gb|EGF11104.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria bacilliformis
ATCC BAA-1200]
Length = 248
Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats.
Identities = 94/234 (40%), Positives = 138/234 (58%), Gaps = 6/234 (2%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P HI +IMDGNGRWA R LPR GH+KG++ + A + G++ LT+FAFS NW
Sbjct: 13 SIPRHIAVIMDGNGRWAKKRFLPRVMGHKKGLDALENLCAECSAAGVQYLTVFAFSTENW 72
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RRP E+ L+ L L K + ++N++++VIG+R + +I ++ AE T N+
Sbjct: 73 RRPPDEVGFLMGLFLQALHKQVQRMHEHNMRLKVIGDRSRFNAEINAGIEAAERLTAANS 132
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL L IA +Y R +I +A + ++ + S + L D P+PDL IRT
Sbjct: 133 GLTLTIAADYGGRWDILQAANKLLAAGKTH------IGESDLNAELMLGDAPEPDLFIRT 186
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GGE R+S+FLLWQ+AY+E F WPDF ++ F A+ + R+RRFG S++
Sbjct: 187 GGEMRISNFLLWQMAYAELYFTDTLWPDFDKKAFQAAIASFQKRERRFGRTSEQ 240
>gi|72382495|ref|YP_291850.1| undecaprenyl pyrophosphate synthase [Prochlorococcus marinus str.
NATL2A]
gi|72002345|gb|AAZ58147.1| Undecaprenyl pyrophosphate synthetase [Prochlorococcus marinus str.
NATL2A]
Length = 256
Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats.
Identities = 90/239 (37%), Positives = 136/239 (56%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P+HI +IMDGNGRWA +GLPR GH G+E + + GI LT+
Sbjct: 18 LPKDLDRLRMPEHIAVIMDGNGRWAKEKGLPRTIGHTAGVEALKTTLHLCSNWGIGALTV 77
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP E++ L+ L +S LK+ +LK +K+ +G+ L + ++KE+
Sbjct: 78 YAFSTENWSRPSEEVNFLMTLFESVLKRELTNLKLEEVKINFMGDLDPLPIGLKDLIKES 137
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ T + G++ + NY R E+ RA + + + G + +D ++ A L T+
Sbjct: 138 VESTSNSKGIHFNVCTNYGGRRELVRAAQKLAERSVKGELDPSLIDENVFASELFTASEV 197
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRT GEKR+S+FLLWQ+AY+E WPDF+ + AL Y R RRFGG+
Sbjct: 198 DPDLLIRTSGEKRISNFLLWQLAYAEIHITDVLWPDFNADTLAKALLDYQSRRRRFGGV 256
>gi|291451228|ref|ZP_06590618.1| undecaprenyl pyrophosphate synthetase 2 [Streptomyces albus J1074]
gi|291354177|gb|EFE81079.1| undecaprenyl pyrophosphate synthetase 2 [Streptomyces albus J1074]
Length = 282
Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats.
Identities = 86/239 (35%), Positives = 136/239 (56%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P H+ ++MDGNGRWA RGLPR GH+ G V +++ E+G+KNL+++AF
Sbjct: 34 KIPGELVPGHVAVVMDGNGRWAKERGLPRTEGHKVGEGVVMDVLKGCLEMGVKNLSLYAF 93
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + + + + I++R +G L ++ L+ A++Q
Sbjct: 94 STENWKRSPEEVRFLMNFNRDVIARRRDEMDALGIRIRWVGRMPKLWKSVVQELQIAQEQ 153
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N + L+ NY R EI+ A + + +D+ +G + V + KYL D+PD D
Sbjct: 154 TKDNDAMTLYFCVNYGGRAEIADAARRMAEDVAAGRLDPSKVGEKTLQKYLYYPDMPDVD 213
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L +R GE+R S++L+WQ AY+E VF WPDF R + A +Y RDRRFGG ++
Sbjct: 214 LFVRPSGEQRTSNYLIWQSAYAEMVFQDVLWPDFDRRDLWRACLEYAQRDRRFGGAVEE 272
>gi|145589628|ref|YP_001156225.1| undecaprenyl diphosphate synthase [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
gi|145048034|gb|ABP34661.1| Undecaprenyl pyrophosphate synthetase [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
Length = 257
Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats.
Identities = 93/235 (39%), Positives = 139/235 (59%), Gaps = 2/235 (0%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
++ P H+ IIMDGNGRWA+ R +PR AGH +G+ +IV +VG++ LT+FAFS N
Sbjct: 15 NAIPRHVAIIMDGNGRWASKRLMPRVAGHSEGLGAVRKIVQECRKVGVEYLTVFAFSSEN 74
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+ L+KL LK L +N+I +R+IG+ D I +++ +E +T
Sbjct: 75 WRRPPEEVGFLMKLFLKSLKGEVSRLAENDISLRLIGDLSRFDSAIQEMVQFSEQKTAEC 134
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L IA NY R +I +A++ + + D+ L+ +L + P+PDL IR
Sbjct: 135 KALTFTIAANYGGRWDILQAMRRCL--AANPDMKPEDISEELLQPHLSMAYAPEPDLFIR 192
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE+R+S+FLLWQ+AY+E F WPDF+ A + ++ R+RRFG S +
Sbjct: 193 TGGEQRVSNFLLWQLAYTELYFTDVLWPDFNEAELHKAFDWFSQRERRFGRTSAQ 247
>gi|299532322|ref|ZP_07045715.1| undecaprenyl diphosphate synthase [Comamonas testosteroni S44]
gi|298719730|gb|EFI60694.1| undecaprenyl diphosphate synthase [Comamonas testosteroni S44]
Length = 245
Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats.
Identities = 95/241 (39%), Positives = 138/241 (57%), Gaps = 7/241 (2%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ S + + P HI +IMDGNGRWA R LPR AGH++G+E A E G++ LT+F
Sbjct: 1 MTSKKNGAVPRHIAVIMDGNGRWAKRRLLPRLAGHKQGVESLRRCARACVERGVQVLTVF 60
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+S L+ L+ + L K L ++ +++ +G+R L D + L EAE
Sbjct: 61 AFSSENWNRPQEEVSGLMSLLANALAKEVAQLSRDGVRLYFVGDRQGLSDKVREGLAEAE 120
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T NT L L + FNY R +I++A + + ++ + + + + VPD
Sbjct: 121 RITAHNTRLVLNVCFNYGGRWDIAQAAQKLVAQGL-------ELTPENLDRAMALAHVPD 173
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL+IRTGGE R+S+FLLWQ AY+E F WPDF A+ + R+RRFG S+
Sbjct: 174 PDLMIRTGGETRISNFLLWQAAYTELFFSNALWPDFDEAALDEAIAVFGGRERRFGQTSE 233
Query: 242 K 242
+
Sbjct: 234 Q 234
>gi|47093940|ref|ZP_00231677.1| undecaprenyl diphosphate synthase [Listeria monocytogenes str. 4b
H7858]
gi|47017678|gb|EAL08474.1| undecaprenyl diphosphate synthase [Listeria monocytogenes str. 4b
H7858]
Length = 222
Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats.
Identities = 97/222 (43%), Positives = 135/222 (60%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA R LPR AGH++G++V + A +GI LT++AFS NW+RP E+
Sbjct: 1 MDGNGRWAKKRFLPRIAGHKEGMDVVKRVTRYANAIGIDVLTLYAFSTENWKRPTDEVDF 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+KL F L + N++V V+G R +L + + +++A T TGL L A N
Sbjct: 61 LMKLPVEFFDSFVPELIEENVRVNVMGYRENLPNHTMRAVEKAIADTAHCTGLTLNFALN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R EI A K +++E + D+ + +L +S + DPDL+IRT GE RLS+F
Sbjct: 121 YGGRSEIITAAKEAMKELELKGKSADDLTEEKLNDHLMSSGLGDPDLLIRTSGELRLSNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+LWQ+AYSEF F +WPDFS+E F A+ +Y R RRFGGL
Sbjct: 181 MLWQLAYSEFYFTDTHWPDFSKEDFLQAIIEYQNRSRRFGGL 222
>gi|254495936|ref|ZP_05108844.1| undecaprenyl diphosphate synthetase [Legionella drancourtii LLAP12]
gi|254354814|gb|EET13441.1| undecaprenyl diphosphate synthetase [Legionella drancourtii LLAP12]
Length = 240
Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats.
Identities = 95/236 (40%), Positives = 138/236 (58%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M P H+ I+MDGNGRWA +RGLPR GH+ G+E +++ + I L++FAFS
Sbjct: 1 MEHKIPQHVAIVMDGNGRWAESRGLPRIDGHKAGVESVKKMIRSCMTKKIACLSLFAFSS 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RPV E++ L++L L+K L ++ I++R G+R L + ++EAE T
Sbjct: 61 ENWSRPVDEVNFLMELFIESLRKELAELNQHGIRMRFTGDRSLLSSILQEQMREAELITA 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N L L + NY + ++ A K I Q + G++ ++D A+ LDT +PDPDL
Sbjct: 121 NNAQLTLNVVVNYGGKWDLVTAAKKIAQAVAEGTLALDEIDEPRFAQCLDTDGLPDPDLF 180
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
IRT GE R+S+F LWQ+AY+E F +WPDF AL ++ R RRFG +SK
Sbjct: 181 IRTSGELRISNFFLWQLAYTELYFTDVHWPDFGEAELELALASFSKRKRRFGNVSK 236
>gi|163856843|ref|YP_001631141.1| undecaprenyl pyrophosphate synthase [Bordetella petrii DSM 12804]
gi|163260571|emb|CAP42873.1| undecaprenyl pyrophosphate synthetase [Bordetella petrii]
Length = 254
Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats.
Identities = 91/236 (38%), Positives = 140/236 (59%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ + P H+ IIMDGNGRWA R LPR AGH KG++ +V A G++ LT+FAFS
Sbjct: 12 TQAVPQHVAIIMDGNGRWATRRHLPRTAGHAKGVQAVRRVVEACGRRGVRYLTLFAFSSE 71
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+S L++L L++ L + +++ V+G+ + + ++ +A+ +T
Sbjct: 72 NWRRPPEEVSLLMRLFVQALEREVDKLNEQGVRLHVVGDMSRFEPRLQALIADAQVRTAA 131
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N L+L +A NY R +I +A + + + +D S +A++L + P+PDL I
Sbjct: 132 NDRLHLSVAANYGGRWDILQATRAMLSQHPELARDPQRIDESHLAEHLSMAWAPEPDLFI 191
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE+R+S+FL+WQ+AY+E F +YWPDF A Y R+RRFG S +
Sbjct: 192 RTGGEQRISNFLIWQLAYAELYFTDQYWPDFGAAELDAAFEWYRTRERRFGRTSAQ 247
>gi|85059916|ref|YP_455618.1| undecaprenyl pyrophosphate synthase [Sodalis glossinidius str.
'morsitans']
gi|84780436|dbj|BAE75213.1| undecaprenyl pyrophosphate synthase [Sodalis glossinidius str.
'morsitans']
Length = 253
Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats.
Identities = 89/235 (37%), Positives = 135/235 (57%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ SS P H+ IIMDGNGRWA RG R GH+ G++ V+ A LT++AFS
Sbjct: 12 LPSSSPRHVAIIMDGNGRWAKNRGKLRIFGHQAGVKSVRRAVSFAVSHHFDALTLYAFSS 71
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+S L++L L SL K+N+++R+IG+ + ++ +E T
Sbjct: 72 ENWNRPSQEVSALMELFVRALDSEVKSLHKHNVRLRIIGDTSRFGMSLQERIRRSEALTC 131
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N GL L IA NY R +I + ++ + ++ G + +D + + + +++ DL+
Sbjct: 132 NNDGLTLNIAANYGGRWDIIQGVRQLAARVQEGILRPDQIDEDALCQVVCMNELAPVDLV 191
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IRTGGE R+S+FLLWQ+AY+E F WPDF +F AL+ + R+RRFGG +
Sbjct: 192 IRTGGEHRISNFLLWQIAYAELFFTDVLWPDFDDAVFEGALDAFAQRERRFGGTT 246
>gi|260437175|ref|ZP_05790991.1| di-trans,poly-cis-decaprenylcistransferase [Butyrivibrio crossotus
DSM 2876]
gi|292810488|gb|EFF69693.1| di-trans,poly-cis-decaprenylcistransferase [Butyrivibrio crossotus
DSM 2876]
Length = 244
Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats.
Identities = 108/234 (46%), Positives = 156/234 (66%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P+HI II+DGNGRWA R LPR AGH +G V I A E+G+K LT++ FS NW
Sbjct: 11 NVPEHIAIILDGNGRWAKKRLLPRNAGHLQGSRVLERICDDAIEIGLKYLTVYVFSTENW 70
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+R SE+ L+K+++++LK + N+KV ++G + LD+DI+ + E E+ ++ NT
Sbjct: 71 KRSESEVQGLMKILRNYLKTCIKRAGEKNMKVVILGKQDMLDEDIIRSINELEESSKNNT 130
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL IA NY +RDE+ RA++ + +D+ + + + A YLDT+D PDPDLIIRT
Sbjct: 131 GLVFQIALNYGARDEMVRAMRKMTKDMIDKGIAPEMITEDMFASYLDTADAPDPDLIIRT 190
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GEKR+S+FLLWQ AYSEF F WPDF+++ A+ +YN RDRRFGG+ ++
Sbjct: 191 SGEKRISNFLLWQCAYSEFDFPEVLWPDFNKKRLIEAVERYNKRDRRFGGVKEE 244
>gi|126729707|ref|ZP_01745520.1| undecaprenyl diphosphate synthase [Sagittula stellata E-37]
gi|126709826|gb|EBA08879.1| undecaprenyl diphosphate synthase [Sagittula stellata E-37]
Length = 241
Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats.
Identities = 111/241 (46%), Positives = 145/241 (60%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M S P H+ IIMDGNGRWA RG PR GH G EIV A G+ LTI
Sbjct: 1 MSRDESQSHGPRHVAIIMDGNGRWATMRGRPRLFGHHAGARRVREIVEACPAAGVDYLTI 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NWRR E++ L+ L + ++ K + K N++VR IG+R LD + ++ EA
Sbjct: 61 FAFSTENWRRTQVEVAGLMSLFRRYIMKEMQAFVKENVRVRFIGDRPRLDAKLRGLMDEA 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E T TG NL IA NY RDE++RA+K + QD+ +G + S DV + +YLDT +P
Sbjct: 121 EAITGHCTGTNLTIALNYGGRDEVARAVKRLAQDVAAGKLRSDDVTEETLPRYLDTRVLP 180
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GE R+S+FLLWQ AY+E+ F+ WPDF+ E F Y RDRR+G +
Sbjct: 181 DPDLVIRTSGEARISNFLLWQSAYAEYEFVDTLWPDFTPEEFARLCGAYGRRDRRYGAVK 240
Query: 241 K 241
Sbjct: 241 A 241
>gi|29654679|ref|NP_820371.1| undecaprenyl pyrophosphate synthetase [Coxiella burnetii RSA 493]
gi|153207712|ref|ZP_01946359.1| undecaprenyl diphosphate synthase [Coxiella burnetii 'MSU Goat
Q177']
gi|154706962|ref|YP_001424019.1| undecaprenyl pyrophosphate synthetase [Coxiella burnetii Dugway
5J108-111]
gi|161830481|ref|YP_001597226.1| undecaprenyl diphosphate synthase [Coxiella burnetii RSA 331]
gi|165919002|ref|ZP_02219088.1| undecaprenyl diphosphate synthase [Coxiella burnetii RSA 334]
gi|212212247|ref|YP_002303183.1| undecaprenyl pyrophosphate synthetase [Coxiella burnetii CbuG_Q212]
gi|212218980|ref|YP_002305767.1| undecaprenyl pyrophosphate synthetase [Coxiella burnetii CbuK_Q154]
gi|42559798|sp|Q83BV5|UPPS_COXBU RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|29541947|gb|AAO90885.1| undecaprenyl pyrophosphate synthetase [Coxiella burnetii RSA 493]
gi|120576408|gb|EAX33032.1| undecaprenyl diphosphate synthase [Coxiella burnetii 'MSU Goat
Q177']
gi|154356248|gb|ABS77710.1| undecaprenyl pyrophosphate synthetase [Coxiella burnetii Dugway
5J108-111]
gi|161762348|gb|ABX77990.1| undecaprenyl diphosphate synthase [Coxiella burnetii RSA 331]
gi|165917327|gb|EDR35931.1| undecaprenyl diphosphate synthase [Coxiella burnetii RSA 334]
gi|212010657|gb|ACJ18038.1| undecaprenyl pyrophosphate synthetase [Coxiella burnetii CbuG_Q212]
gi|212013242|gb|ACJ20622.1| undecaprenyl pyrophosphate synthetase [Coxiella burnetii CbuK_Q154]
Length = 237
Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats.
Identities = 111/233 (47%), Positives = 151/233 (64%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ I+MDGNGRWA RGLPR AGHR G +V IV AAE ++ LT+FAFSI N
Sbjct: 2 IPRHVAIVMDGNGRWANRRGLPRVAGHRAGAKVVRRIVEYAAEKPLEVLTLFAFSIENRA 61
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP SE++ L+ L LKK L KNN+++RVIG+ D +L ++ ++D T+ NTG
Sbjct: 62 RPQSEVNFLMSLFLDSLKKNTEELHKNNVQLRVIGDHREFDKKMLAQIQTSQDLTKHNTG 121
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L IA NYS R +I +A++ + + I++ + S + + L YL SD+P+PDL+IRT
Sbjct: 122 LKLIIALNYSGRWDILQAVQRMAEKIKNQELTSELMSAELFQNYLCLSDLPEPDLLIRTS 181
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+RLS+F+LWQ AY+E F P WPDF+ E F AL Y R RRFG ++
Sbjct: 182 GEQRLSNFMLWQFAYTEIYFTPALWPDFNEETFDQALAFYRTRQRRFGLTPEQ 234
>gi|297199545|ref|ZP_06916942.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sviceus
ATCC 29083]
gi|197713529|gb|EDY57563.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sviceus
ATCC 29083]
Length = 282
Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats.
Identities = 93/235 (39%), Positives = 140/235 (59%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P+H+ I+MDGNGRWA RGLPR GH+ G E +++ A E G+KN++++AF
Sbjct: 28 KLPGELIPEHVAIVMDGNGRWAKERGLPRTEGHKVGAERVLDVLQGAIEAGVKNISLYAF 87
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + F++K L + I+VR +G L + L+ A++Q
Sbjct: 88 STENWKRSPDEVRFLMNFNRDFIRKTRDQLDELGIRVRWVGRMPKLWKSVAKELQVAQEQ 147
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N L L+ NY R EI+ A + + +D+++G + V+ +AKYL D+PD D
Sbjct: 148 TKGNDKLTLYFCMNYGGRAEIADAAQALAEDVKAGRLDPAKVNEKTLAKYLYYPDMPDVD 207
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R GE+R S++LLWQ AY+E VF WPDF R + A ++ RDRRFGG
Sbjct: 208 LFLRPSGEQRTSNYLLWQSAYAEMVFQDVLWPDFDRRDLWRACVEFASRDRRFGG 262
>gi|253581351|ref|ZP_04858577.1| undecaprenyl pyrophosphate synthetase [Fusobacterium varium ATCC
27725]
gi|251836715|gb|EES65249.1| undecaprenyl pyrophosphate synthetase [Fusobacterium varium ATCC
27725]
Length = 230
Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats.
Identities = 105/235 (44%), Positives = 148/235 (62%), Gaps = 7/235 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M S P+HI IIMDGNGRWA RGLPR GH++G + +I+ A ++G+K LT++AFS
Sbjct: 1 MGSRIPNHIAIIMDGNGRWAEKRGLPRTFGHKEGADALRKIITYAGKIGVKYLTVYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+R EI L+ L K++LK ++ KNN++ V G + + +L +K+ ED++R
Sbjct: 61 ENWKRSKDEIDALMFLFKTYLKNEEKNIMKNNVRFLVSGRKNGVSSSLLEAIKKLEDKSR 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
NTGL L IAFNY R EI A+ +I + +++ +KYL +D+PDP+L+
Sbjct: 121 DNTGLTLNIAFNYGGRAEIIDAVNSIL------KSGADNINEEDFSKYLY-NDIPDPELL 173
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IRT GE R+S+FLLWQ+AYSE WPDF + A+ YN RDRRFGG+
Sbjct: 174 IRTSGEFRISNFLLWQIAYSEIYITKALWPDFDEKELDKAIQSYNERDRRFGGVK 228
>gi|161507689|ref|YP_001577643.1| undecaprenyl pyrophosphate synthetase [Lactobacillus helveticus DPC
4571]
gi|260101371|ref|ZP_05751608.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus
helveticus DSM 20075]
gi|160348678|gb|ABX27352.1| Undecaprenyl pyrophosphate synthetase [Lactobacillus helveticus DPC
4571]
gi|260084823|gb|EEW68943.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus
helveticus DSM 20075]
gi|328465731|gb|EGF36935.1| undecaprenyl pyrophosphate synthase [Lactobacillus helveticus MTCC
5463]
Length = 244
Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats.
Identities = 101/233 (43%), Positives = 147/233 (63%), Gaps = 3/233 (1%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+H+ IIMDGNGRWA R PR GHR+G++ I AA ++GIK LT++AFS NW RP
Sbjct: 9 NHLAIIMDGNGRWAKKRHKPRFVGHREGMDNVERITLAADKLGIKVLTLYAFSTENWARP 68
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E++ L+ L F K +L +NN+KV ++G L + +++ A +T NTGL
Sbjct: 69 KEEVAYLMNLPVRFFDKYMPTLMENNVKVNIMGYLDELPEKTYQIVQRAMSETANNTGLI 128
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV---PDPDLIIRT 188
L AFNY SR EI+ A++ + IE+G++ S D+ +I++YL T + DPDL+IRT
Sbjct: 129 LNFAFNYGSRREITTAMQELGGMIEAGALKSEDITEKMISQYLMTKNFGKYQDPDLLIRT 188
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
GE+R+S+FLLWQ+AYSE F + WPDF + ++ Y R+RRFG + +
Sbjct: 189 SGEQRISNFLLWQLAYSELAFSDKNWPDFDEDDLRKFVDDYKHRNRRFGKVDE 241
>gi|229588807|ref|YP_002870926.1| undecaprenyl pyrophosphate synthetase [Pseudomonas fluorescens
SBW25]
gi|229360673|emb|CAY47531.1| undecaprenyl pyrophosphate synthetase [Pseudomonas fluorescens
SBW25]
Length = 251
Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats.
Identities = 93/237 (39%), Positives = 140/237 (59%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ S P H+ IIMDGN RWA R +P AGH+ G++ ++ AE ++ LT+FAFS
Sbjct: 8 VPSVVPRHVAIIMDGNNRWAKKRFMPGVAGHKAGVDAVRAVIEVCAEAKVEVLTLFAFSS 67
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP E+S L+ L L++ L NNI +R+IG+R ++ ++EAE T
Sbjct: 68 ENWQRPAEEVSALMDLFFRALRREAKRLNDNNICLRIIGDRSRFHPELQAAMREAEAITA 127
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
L IA NY + +I++A + + +++++G + D+ L+ L T D+P PDL
Sbjct: 128 GANRFVLQIAANYGGQWDIAQAAQRLAREVQAGHLRPDDITPELLQTCLVTGDLPLPDLC 187
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTGGE R+S+FLLWQ+AY+E F +WPDF + AL + R RRFG S++
Sbjct: 188 IRTGGEHRISNFLLWQLAYTELYFSDLFWPDFKHDAMRTALADFASRQRRFGKTSEQ 244
>gi|91202465|emb|CAJ72104.1| strongly similar to undecaprenyl diphosphate synthase [Candidatus
Kuenenia stuttgartiensis]
Length = 238
Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats.
Identities = 99/236 (41%), Positives = 143/236 (60%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ S P+HI IIMDGNGRWA + L R GH G + EI A+ IK LT++AFS
Sbjct: 3 KNGSLPEHIAIIMDGNGRWARQKKLLRIKGHETGAKAVREITRECAKKHIKQLTLYAFSQ 62
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP EI L+KL+K+FL ++KNNI++ IG L + + L + ++++
Sbjct: 63 ENWKRPKREIDLLMKLLKNFLIGEREEIQKNNIRLTAIGRIKELPEFVQRELSISIEESK 122
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
+NTG+ L +A NY R EI A K I +++ G + ++ KYL ++PDPDL+
Sbjct: 123 MNTGMVLCLALNYGGRTEIIDATKKIVAELKKGKLKIDEITEESFKKYLYMPNMPDPDLL 182
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
IRTGGE R+S+FLLW+++Y+E YWPDF + AL Y R+RR+GGL +
Sbjct: 183 IRTGGEMRISNFLLWEISYAELWVTDTYWPDFKKPHLEEALLAYANRERRYGGLKE 238
>gi|313891924|ref|ZP_07825525.1| di-trans,poly-cis-decaprenylcistransferase [Dialister
microaerophilus UPII 345-E]
gi|313119567|gb|EFR42758.1| di-trans,poly-cis-decaprenylcistransferase [Dialister
microaerophilus UPII 345-E]
Length = 240
Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats.
Identities = 96/230 (41%), Positives = 136/230 (59%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ II+DGNGRW G R GH+ G +IV AA +GIK LT++AFS NW+
Sbjct: 7 MPQHVAIILDGNGRWGKKHGRERTYGHKFGAANVKKIVRFAASLGIKKLTLYAFSTENWK 66
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ L+ L K +L + L ++N++V V+G+ L + +K E+ T+ N G
Sbjct: 67 RPKLEVKFLMTLFKEYLIEQLRELTEDNVQVHVVGDVSKLSKSLQEEIKSCENDTKNNDG 126
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L IA NY R E+ A + I D+++G + ++D I L SD D DL+IRTG
Sbjct: 127 LILNIAINYGGRQELVHAFRKIASDVKAGILNPSEIDEENIKDALYASDADDVDLLIRTG 186
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE+R+S+FLLWQ++YSE F WPDF +A+ + R+RRFGGL
Sbjct: 187 GEQRISNFLLWQISYSELYFTSVLWPDFDERELENAIKWFVNRNRRFGGL 236
>gi|66766333|dbj|BAD99031.1| undecaprenyl diphosphate synthase [Desulfovibrio vulgaris]
Length = 237
Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats.
Identities = 95/237 (40%), Positives = 131/237 (55%), Gaps = 4/237 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
++ + P H+ IIMDGNGRWA RGL R GHR G E IV +GI +LT++ FS
Sbjct: 2 LLPETLPRHVAIIMDGNGRWATQRGLSRSDGHRAGTEAARAIVTECRTLGIPHLTMYTFS 61
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP +E+ L +L+ FL++ +L + +I++ V G L L+ A +T
Sbjct: 62 KENWGRPGAEVKFLFELLVDFLREELPNLIQRDIRLSVFGQLSDLPLAARKALEHAISRT 121
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
T + L +A NYS+RDEI A + + + + + A L ++ PDPDL
Sbjct: 122 AACTTMRLNLALNYSARDEILMACRALAAE----GLAPEAITEEAFAARLWSAGQPDPDL 177
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
+IRT GE R+S+FLL+Q AYSEF F WPDF+ E F AL Y R RRFG
Sbjct: 178 VIRTSGEVRISNFLLYQSAYSEFHFTDTLWPDFTPEHFRAALRDYAGRQRRFGKTEA 234
>gi|33865468|ref|NP_897027.1| undecaprenyl pyrophosphate synthase [Synechococcus sp. WH 8102]
gi|42559946|sp|Q7U7P7|UPPS_SYNPX RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|33632637|emb|CAE07449.1| Undecaprenyl pyrophosphate synthetase (UPPS) [Synechococcus sp. WH
8102]
Length = 260
Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats.
Identities = 91/236 (38%), Positives = 140/236 (59%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P H+ +IMDGNGRWA ARGLPR GHR G+E + ++ GI LT +AF
Sbjct: 20 ELDGDRLPVHVAVIMDGNGRWAEARGLPRMMGHRAGVEALKSTLRLCSDWGIAALTAYAF 79
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP E++ L+ L + L+K +L++ +++R +G+ +L + ++ +A ++
Sbjct: 80 STENWSRPGDEVNFLMTLFERVLQKELRTLEEEQVRIRFLGDLDALPLKLQELIGDATER 139
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T N G++ + NY R E+ RA + + + +G + D+D + +A L T+ DPD
Sbjct: 140 TAANDGIHFNVCTNYGGRRELVRAAQRLARQAANGDLMPEDIDENSLAAELFTAGEQDPD 199
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
L+IRT GE R+S+FLLWQ+AY+E +WPDF+ E AL + R RRFGGL
Sbjct: 200 LLIRTSGEHRISNFLLWQLAYAEIHVTDVFWPDFNAEALKRALLDFQSRSRRFGGL 255
>gi|300361908|ref|ZP_07058085.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus gasseri
JV-V03]
gi|300354527|gb|EFJ70398.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus gasseri
JV-V03]
Length = 239
Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 100/231 (43%), Positives = 143/231 (61%), Gaps = 3/231 (1%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+H+ IIMDGNGRWA R LPR GHR G++ I AA E+GIK LT++AFS NW RP
Sbjct: 9 NHLAIIMDGNGRWAKKRHLPRFVGHRHGMDNIRNIALAANEMGIKVLTLYAFSTENWARP 68
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E++ L++L F K L +NN++V ++G L + V ++A T NTG+
Sbjct: 69 TDEVNYLMRLPIDFFDKFMPELMENNVRVNIMGFLDELPEKTYLVTQKAMSDTANNTGMI 128
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP---DPDLIIRT 188
L AFNY SR EI+ ++ I +++G + +D+D +++ +L T + DPDL+IRT
Sbjct: 129 LNFAFNYGSRREITAGVQKIAHQVKAGEINPNDIDEKMVSDHLLTHSLTPYDDPDLLIRT 188
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE+RLS+FLLWQ+AY+EF F + WPDF + + Y R+RRFG L
Sbjct: 189 SGEERLSNFLLWQMAYTEFSFSNKLWPDFDKNDLEKLVKDYYGRNRRFGKL 239
>gi|295426322|ref|ZP_06818981.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus
amylolyticus DSM 11664]
gi|295063995|gb|EFG54944.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus
amylolyticus DSM 11664]
Length = 244
Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 104/233 (44%), Positives = 147/233 (63%), Gaps = 3/233 (1%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+H+ IIMDGNGRWA R PR GHR+G++ I AA E+GIK LT++AFS NW RP
Sbjct: 9 NHLAIIMDGNGRWAKKRHQPRVFGHREGMDNVERITLAADELGIKVLTLYAFSTENWARP 68
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E++ L+ L F K +L +NN+KV ++G L +++ + +T NTGL
Sbjct: 69 KEEVAYLMNLPVRFFDKYMPTLMENNVKVNIMGYLDELPPKTYDIVQRSMAETANNTGLV 128
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS---DVPDPDLIIRT 188
L AFNY SR EI+ A+K + IE+G++ S D+ LI+K+L T+ DPDL+IRT
Sbjct: 129 LNFAFNYGSRREITSAMKELGGLIEAGALSSEDITEDLISKHLMTARFGPYSDPDLLIRT 188
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
GE+R+S+FLLWQ+AYSE F P+ WPDF+ + + Y R+RRFG + +
Sbjct: 189 SGEQRISNFLLWQIAYSELAFSPKAWPDFNEDDLKMFVENYQTRNRRFGKVDE 241
>gi|255020971|ref|ZP_05293026.1| Undecaprenyl pyrophosphate synthetase [Acidithiobacillus caldus
ATCC 51756]
gi|254969576|gb|EET27083.1| Undecaprenyl pyrophosphate synthetase [Acidithiobacillus caldus
ATCC 51756]
Length = 251
Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 103/237 (43%), Positives = 155/237 (65%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
S++ P H+ IIMDGNGRWA R LPR AGHR+G EV E+V + AE+G+ +LT+FAFS
Sbjct: 6 RSTTLPRHLAIIMDGNGRWAYRRHLPRVAGHRRGAEVVREMVQSCAELGVAHLTLFAFST 65
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NWRRP E+ L+ L + L++ L ++ +++R+IG+R +L+ DI+ +++EAE T
Sbjct: 66 ENWRRPPLEVRLLMNLFRLMLRREARRLHEHGVRLRIIGDRRALEADIVALIEEAETLTA 125
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N L L +A NY R +I++A + +++ ++D + IA +L +D P+PDL+
Sbjct: 126 SNDRLTLNLAVNYGGRWDIAQAARTAALELQRRGGDLAELDEASIAPHLALADSPEPDLL 185
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTGGE+R+S+FL+WQ+AY+EF F WPDF R+ AL + R RRFG +
Sbjct: 186 IRTGGEERISNFLIWQMAYTEFYFTEVLWPDFDRDALEQALRSFAQRQRRFGRTGDQ 242
>gi|254442949|ref|ZP_05056425.1| undecaprenyl diphosphate synthase [Verrucomicrobiae bacterium
DG1235]
gi|198257257|gb|EDY81565.1| undecaprenyl diphosphate synthase [Verrucomicrobiae bacterium
DG1235]
Length = 249
Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 94/232 (40%), Positives = 136/232 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA RG R GH++G + + A E+G++ LT++AFS NW R
Sbjct: 11 PQHIGIIMDGNGRWAKQRGHSRPRGHKEGAKATRRAIDACQELGVRYLTLYAFSAENWNR 70
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L++ FL + +L K I++ IG L L++A D T
Sbjct: 71 PDFEVKALMELLELFLARETKTLIKRRIRLHAIGRIEELPASANKALRKAIDATAEFDDW 130
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L +A NYSSR+E+ A ++ + + +G + D A++L T+ +PDPDLIIRT G
Sbjct: 131 HLVLALNYSSRNEVLDAARSFAKSVAAGEIDPDKTDWDGFAQHLYTAGLPDPDLIIRTSG 190
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E R+S+FLL Q AY+EF F WPDF + A+ Y R+RRFG ++
Sbjct: 191 ETRVSNFLLMQSAYAEFYFTETLWPDFDKSHLEKAIASYRNRERRFGKTGEQ 242
>gi|53719764|ref|YP_108750.1| undecaprenyl pyrophosphate synthetase [Burkholderia pseudomallei
K96243]
gi|76808682|ref|YP_333971.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 1710b]
gi|126455056|ref|YP_001066748.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 1106a]
gi|134277426|ref|ZP_01764141.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 305]
gi|167720162|ref|ZP_02403398.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei DM98]
gi|167739167|ref|ZP_02411941.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 14]
gi|167816378|ref|ZP_02448058.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 91]
gi|167824756|ref|ZP_02456227.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 9]
gi|167846288|ref|ZP_02471796.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei B7210]
gi|167894870|ref|ZP_02482272.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 7894]
gi|167903259|ref|ZP_02490464.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei NCTC
13177]
gi|167911500|ref|ZP_02498591.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 112]
gi|167919509|ref|ZP_02506600.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei
BCC215]
gi|217421860|ref|ZP_03453364.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
pseudomallei 576]
gi|226200143|ref|ZP_03795689.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
pseudomallei Pakistan 9]
gi|237812804|ref|YP_002897255.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
pseudomallei MSHR346]
gi|242316425|ref|ZP_04815441.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
pseudomallei 1106b]
gi|254198300|ref|ZP_04904722.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei S13]
gi|254259286|ref|ZP_04950340.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
pseudomallei 1710a]
gi|52210178|emb|CAH36157.1| undecaprenyl pyrophosphate synthetase [Burkholderia pseudomallei
K96243]
gi|76578135|gb|ABA47610.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 1710b]
gi|126228698|gb|ABN92238.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
pseudomallei 1106a]
gi|134251076|gb|EBA51155.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 305]
gi|169655041|gb|EDS87734.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei S13]
gi|217395602|gb|EEC35620.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
pseudomallei 576]
gi|225927827|gb|EEH23868.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
pseudomallei Pakistan 9]
gi|237505258|gb|ACQ97576.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
pseudomallei MSHR346]
gi|242139664|gb|EES26066.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
pseudomallei 1106b]
gi|254217975|gb|EET07359.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
pseudomallei 1710a]
Length = 260
Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 98/235 (41%), Positives = 141/235 (60%), Gaps = 1/235 (0%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
++ P HI IIMDGNGRWA R LPR AGH +G++ +V A G++ LT+FAFS N
Sbjct: 14 AAVPRHIAIIMDGNGRWATERRLPRVAGHTRGVDAVRSVVEGCARAGVEYLTLFAFSSEN 73
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+S L++L + L++ L N I++RV+G+ + I +++ E +T N
Sbjct: 74 WRRPNDEVSFLMRLFITALEREVGKLHANGIRLRVVGDLTKFEPRIQALIRRGETKTARN 133
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T L L IA NY R +I +A + + ++ +D A++L + P+PDL IR
Sbjct: 134 TRLTLTIAANYGGRWDILQATRKLVEEAAREGRAPE-IDEDAFARHLAMAYAPEPDLFIR 192
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE+R+S+FLLWQ+AY+EF F +WPDF AL Y R+RRFG S +
Sbjct: 193 TGGEQRISNFLLWQLAYTEFYFTDTFWPDFDAGALAEALASYTHRERRFGRTSAQ 247
>gi|323697429|ref|ZP_08109341.1| undecaprenyl diphosphate synthase [Desulfovibrio sp. ND132]
gi|323457361|gb|EGB13226.1| undecaprenyl diphosphate synthase [Desulfovibrio desulfuricans
ND132]
Length = 235
Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 98/233 (42%), Positives = 131/233 (56%), Gaps = 4/233 (1%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI +IMDGNGRWA RGL R GHR G E +V E+G+++LT++ FS NW
Sbjct: 3 IPTHIAVIMDGNGRWAKQRGLQRSDGHRAGTEAARAVVTRCRELGVRHLTLYTFSKENWS 62
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ L L+ +FLK+ SLK+ I++ ++G + + VL+ QT T
Sbjct: 63 RPKDEVRTLFDLLTTFLKREEKSLKEQGIRLNILGEIDDMPLAVRQVLRHVMRQTAGCTD 122
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ L +A NYS R+EI RA + + V V A L T+ PDPDL+IRT
Sbjct: 123 MTLNLALNYSGREEIVRAARALVAK----GVPPEAVTEETFAAELWTAGQPDPDLVIRTS 178
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE RLS++LL+Q AYSEF F YWPDFS A+ N R RRFG ++
Sbjct: 179 GELRLSNYLLFQCAYSEFYFTDIYWPDFSPAELDKAIADLNGRQRRFGKTGEQ 231
>gi|77457332|ref|YP_346837.1| undecaprenyl pyrophosphate synthetase [Pseudomonas fluorescens
Pf0-1]
gi|77381335|gb|ABA72848.1| undecaprenyl pyrophosphate synthetase [Pseudomonas fluorescens
Pf0-1]
Length = 251
Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 95/236 (40%), Positives = 142/236 (60%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S+ P H+ IIMDGN RWA R +P AGH+ G++ ++ AE ++ LT+FAFS
Sbjct: 9 PSTVPRHVAIIMDGNNRWAKKRFMPGVAGHKAGVDAVRAVIEVCAEAKVEVLTLFAFSSE 68
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW+RP E+S L+ L L++ L NNI +R+IG+R ++ ++EAE T
Sbjct: 69 NWQRPADEVSALMDLFFKALRREAKRLNDNNISLRIIGDRTRFHPELQAAMREAEAMTAG 128
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
L IA NY + +I++A + + +++++G + D+ L+ L T D+P PDL I
Sbjct: 129 ANRFILQIAANYGGQWDIAQAAQRLAREVQAGHLRPEDITPDLLQTCLVTGDLPLPDLCI 188
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE R+S+FLLWQ+AY+E F +WPDF E +AL + LR RRFG S++
Sbjct: 189 RTGGEHRISNFLLWQLAYAELYFSDLFWPDFKHEAMRNALVDFALRQRRFGKTSEQ 244
>gi|163791593|ref|ZP_02185994.1| undecaprenyl diphosphate synthase [Carnobacterium sp. AT7]
gi|159873142|gb|EDP67245.1| undecaprenyl diphosphate synthase [Carnobacterium sp. AT7]
Length = 258
Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 93/235 (39%), Positives = 139/235 (59%), Gaps = 3/235 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+ P HI IIMDGNGRWA R +PR AGH++G+ ++ A+E+G+K L+++AFS N
Sbjct: 24 ETIPHHIAIIMDGNGRWAQKRFMPRIAGHKEGMNTVKKVTKRASEIGVKVLSLYAFSTEN 83
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W+RP E++ L++L F L + N+KV+V+G L + +++A T N
Sbjct: 84 WKRPDEEVNFLMQLPVDFFDTFVPELMEQNVKVQVMGFTEKLPNHTRKAVEKAISDTEKN 143
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD---PDL 184
TG+ L A NY R E+ A K + + +++G + D+ SL + L T ++ + D
Sbjct: 144 TGMVLNFALNYGGRSELLEASKTLAEKVKTGEIDVEDITESLFEESLMTRNLEEYQNVDF 203
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE+R+S+F+LWQ AYSEF F WPDF + A+ Y R RRFGGL
Sbjct: 204 MIRTSGEERISNFMLWQNAYSEFYFSKVLWPDFDEQALEDAIGIYQKRHRRFGGL 258
>gi|327468392|gb|EGF13877.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sanguinis
SK330]
Length = 226
Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 101/226 (44%), Positives = 139/226 (61%), Gaps = 4/226 (1%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA R PR GH+ G+E + AA E+G++ LT++AFS NW RP E+S
Sbjct: 1 MDGNGRWAKKRMQPRVFGHKAGMETLQRVTIAAKEMGVQVLTVYAFSTENWSRPEKEVSF 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
++ L F + L KNN+K+++IG+ L + L++AE T+LNTGL L A N
Sbjct: 61 IMNLPVEFYDRYVPELHKNNVKIQMIGDTAKLPEATFEALEKAESLTKLNTGLILNFALN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLIIRTGGEKR 193
Y R EI++A+K I QD+ + D+ +I YL TS++P DPDL+IRT GE R
Sbjct: 121 YGGRYEINQAVKLIAQDVLDAKLSPGDITEEVIGNYLYTSNLPKMLRDPDLVIRTSGELR 180
Query: 194 LSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
LS+FL WQ AYSE F WPDF + A+ +Y+ R+RRFGG+
Sbjct: 181 LSNFLPWQSAYSELYFTDILWPDFDEKALKAAIAEYSRRNRRFGGV 226
>gi|238796614|ref|ZP_04640121.1| Di-trans,poly-cis-decaprenylcistransferase [Yersinia mollaretii
ATCC 43969]
gi|238719592|gb|EEQ11401.1| Di-trans,poly-cis-decaprenylcistransferase [Yersinia mollaretii
ATCC 43969]
Length = 238
Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 88/231 (38%), Positives = 136/231 (58%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IIMDGNGRWA +G R GH+ G++ V+ AA + LT++AFS NW
Sbjct: 1 MPRHVAIIMDGNGRWAKNQGKLRVFGHKAGVKSVRRAVSFAATHHLDALTLYAFSSENWN 60
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E++ L++L L SL K+N+++ VIG+ + + ++ +E T N G
Sbjct: 61 RPAQEVTALMELFVRALDSEVKSLHKHNVRLSVIGDISRFSERLQQRIRRSEALTVNNDG 120
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L IA NY R +I + ++++ + I+ G + D++ + ++ + + DL+IRTG
Sbjct: 121 LKLNIAANYGGRWDIIQGVRHLAEQIQRGELQPIDINEESLNSHICLHEQSEVDLVIRTG 180
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
GE R+S+FLLWQ+AY+E F WPDF +F ALN + R+RRFGG +
Sbjct: 181 GEHRISNFLLWQIAYAELYFTDVLWPDFDEHVFEGALNAFAQRERRFGGTT 231
>gi|237736216|ref|ZP_04566697.1| undecaprenyl pyrophosphate synthetase [Fusobacterium mortiferum
ATCC 9817]
gi|229421769|gb|EEO36816.1| undecaprenyl pyrophosphate synthetase [Fusobacterium mortiferum
ATCC 9817]
Length = 228
Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 101/235 (42%), Positives = 146/235 (62%), Gaps = 7/235 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M P+HI IIMDGNGRWA RGLPR GH++G +I+ AA++G+K LT++AFS
Sbjct: 1 MEKQIPNHIAIIMDGNGRWAKRRGLPRTFGHKEGAAALRKIITHAAKIGVKYLTVYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+R E+S L+ L KS++K ++ +NNI+ V G + ++ +L + +++++
Sbjct: 61 ENWKRSQEEVSALMFLFKSYIKNEEKNIMENNIRFMVSGRKDNVSSSLLEAIGNLQEKSK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
NTGL IAFNY R EI AI I + + ++ +KYL +D+PDP+L+
Sbjct: 121 NNTGLTFNIAFNYGGRAEIVDAINKILKSGK------ESINEDEFSKYLY-NDIPDPELL 173
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IRT GE R+S+FLLWQ+AYSE WPDF+ E A+ +N RDRRFGG+
Sbjct: 174 IRTSGELRISNFLLWQIAYSEIYITDTLWPDFNEEELDKAIEVFNKRDRRFGGVK 228
>gi|254460539|ref|ZP_05073955.1| undecaprenyl pyrophosphate synthetase 1 [Rhodobacterales bacterium
HTCC2083]
gi|206677128|gb|EDZ41615.1| undecaprenyl pyrophosphate synthetase 1 [Rhodobacteraceae bacterium
HTCC2083]
Length = 254
Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 109/238 (45%), Positives = 146/238 (61%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A S P H+ IIMDGNGRWA R PR GH G +IV A G+ LTIFA
Sbjct: 16 AEANPMSGPRHVAIIMDGNGRWAQMRNRPRLFGHHAGARRVRQIVEACPPNGVNYLTIFA 75
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW+R E+S L+KL + ++ K +L ++VR IG+R+ L+D ++ ++ E
Sbjct: 76 FSTENWKRTQVEVSGLMKLFQRYITKEARTLADAGVRVRFIGDRVRLNDKLVELMDSLES 135
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T N ++L IA NY RDE++RA K + QD+ SG + VD + KYLDT +PDP
Sbjct: 136 MTEKNDKVHLTIALNYGGRDEVARATKRLAQDVASGKLDPEIVDEETLPKYLDTYVLPDP 195
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRT GE R+S+FLLWQ AYSE+ F+ WPDF+ E F ++Y RDRRFGG+
Sbjct: 196 DLVIRTSGEARISNFLLWQSAYSEYEFVETLWPDFTAEEFGALTSKYGNRDRRFGGVK 253
>gi|217970576|ref|YP_002355810.1| undecaprenyl diphosphate synthase [Thauera sp. MZ1T]
gi|217507903|gb|ACK54914.1| undecaprenyl diphosphate synthase [Thauera sp. MZ1T]
Length = 255
Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 99/235 (42%), Positives = 134/235 (57%), Gaps = 3/235 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P HI +IMDGNGRWA R LPR AGH +G+E V + G++ LT+FAFS N
Sbjct: 17 SQVPKHIAVIMDGNGRWARKRMLPRVAGHARGVEALRATVRGCVDRGVEYLTVFAFSSEN 76
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+S L++L L+K + N+++ RVIG+ D ++ +++EAE T N
Sbjct: 77 WRRPQDEVSFLMQLFLKSLQKEIRRMHDNDMRFRVIGDLSKFDPRLVDMIREAETLTAGN 136
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
GLN +A NY R +I A+ + + IA L S P+PDL IR
Sbjct: 137 GGLNFTVAANYGGRWDILDAMSRL---MAREPGRLERFTEDEIASELSMSFAPEPDLFIR 193
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGEKR+S+FLLWQ+AY+E F WPDF A+ Y R+RRFG S++
Sbjct: 194 TGGEKRISNFLLWQLAYTELYFTDVLWPDFDDGALGQAIGSYQGRERRFGRTSEQ 248
>gi|94496938|ref|ZP_01303512.1| undecaprenyl diphosphate synthase [Sphingomonas sp. SKA58]
gi|94423614|gb|EAT08641.1| undecaprenyl diphosphate synthase [Sphingomonas sp. SKA58]
Length = 259
Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats.
Identities = 99/233 (42%), Positives = 149/233 (63%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S P H+ IIMDGNGRWA R LPR AGHR G+E + AA ++G++ LT++AFS
Sbjct: 27 PSPGPRHVAIIMDGNGRWAKKRLLPRIAGHRAGVEAVRRVARAAQDMGLECLTLYAFSSE 86
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW+RP SE+++L+ L++ F++ N ++++VIG+ +LD ++ +++ A +T
Sbjct: 87 NWKRPASEVADLMGLLRHFIQSDIEEFHANGVRLKVIGDYRALDPSLVTLIEGAMARTAG 146
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N+G + IA NY ++DE+ RA + I Q + G + + D+ + I LDT ++P DL+I
Sbjct: 147 NSGPVIAIALNYGAQDEMVRAAQRIAQKVARGELAASDIGIADIDNELDTCELPPLDLLI 206
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE RLS+F+LWQ AY+E F WPDF AL+ + +RDRRFGGL
Sbjct: 207 RTSGELRLSNFMLWQAAYAELYFTDLLWPDFDDRALGQALDAFRMRDRRFGGL 259
>gi|310764945|gb|ADP09895.1| Undecaprenyl pyrophosphate synthetase [Erwinia sp. Ejp617]
Length = 250
Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats.
Identities = 91/237 (38%), Positives = 139/237 (58%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ P H+ IIMDGNGRWA +G R +GH+ G++ V+ A + LT++AFS
Sbjct: 13 QGAGPRHVAIIMDGNGRWAKNQGKLRISGHKAGVKSVRRAVSFAVSRKLDALTLYAFSSE 72
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP E+ L++L L SL K+N+++++IG+ + + ++ AE+ T+
Sbjct: 73 NWNRPQQEVLALMELFVWALDSEVKSLHKHNVRLKIIGDISRFNRRLQGCIRRAEEMTQQ 132
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N GL L IA NY R +I ++ I + ++ G + ++ + +L +D+ DL+I
Sbjct: 133 NNGLTLNIAANYGGRWDIIHGVRKIAEQVQEGLLRPDQIEEDTLGTHLCLNDMAPVDLVI 192
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
RTGGE R+S+FLLWQVAY+EF F WPDF +F ALN + R+RRFGG + G
Sbjct: 193 RTGGEHRISNFLLWQVAYAEFWFTDTLWPDFDEHVFEGALNAFAQRERRFGGATPGG 249
>gi|297538507|ref|YP_003674276.1| undecaprenyl diphosphate synthase [Methylotenera sp. 301]
gi|297257854|gb|ADI29699.1| undecaprenyl diphosphate synthase [Methylotenera sp. 301]
Length = 252
Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats.
Identities = 97/236 (41%), Positives = 141/236 (59%), Gaps = 3/236 (1%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
++ P HI +IMDGNGRWA R LPR AGH++G+E ++V + ++ LT+FAFS
Sbjct: 14 AAETPKHIAVIMDGNGRWARKRFLPRVAGHKRGVETVRDLVKYCVTLKVEYLTLFAFSSE 73
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+S L+ L LK+ L +NNIK+ +IG+R D +++ ++ +E T
Sbjct: 74 NWRRPTEEVSYLMGLFMHALKREVAKLHQNNIKLIMIGDRSRFDAELVAQIEASEQLTAS 133
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTGL L IA NY R ++ +A+ + + + + +L S P+PDL I
Sbjct: 134 NTGLVLTIAANYGGRWDVLQAVNKM---QLAAPQLTGFYREDHLTPHLSMSYAPEPDLFI 190
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE R+S+FLLWQ+AY+E F WPDF+ F A+ Y R+RRFG S++
Sbjct: 191 RTGGETRISNFLLWQLAYTELYFTDTLWPDFNEAAFNLAIQSYQNRERRFGRTSEQ 246
>gi|120603156|ref|YP_967556.1| undecaprenyl diphosphate synthase [Desulfovibrio vulgaris DP4]
gi|120563385|gb|ABM29129.1| Undecaprenyl pyrophosphate synthetase [Desulfovibrio vulgaris DP4]
Length = 247
Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats.
Identities = 97/239 (40%), Positives = 135/239 (56%), Gaps = 4/239 (1%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S+ +++ P H+ IIMDGNGRWA RGL R GH+ G E IV A VGI++LT++ F
Sbjct: 10 SVSAAALPAHVAIIMDGNGRWATMRGLSRSEGHKAGTEAARAIVTEARTVGIRHLTMYTF 69
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP SE+ L +L+ FL + +L++ I++ V G L L+ A +
Sbjct: 70 SRENWNRPKSEVKFLFELLVDFLGRELANLERQGIRLNVFGALEDLPMATRMALQHAIGR 129
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T + L +A NYS R+EI RA +++ + V D+ A L T+ PDPD
Sbjct: 130 TAHCDAMMLNLALNYSGREEILRACRSLVTE----GVAPADITEEAFAARLYTAGQPDPD 185
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRT GE R+S++LL+Q AYSEF F WPDF+ AL Y R RRFG ++
Sbjct: 186 LVIRTSGEIRISNYLLFQSAYSEFYFTDTLWPDFTPAELHKALETYAGRSRRFGRTQEQ 244
>gi|332300352|ref|YP_004442273.1| Undecaprenyl pyrophosphate synthase [Porphyromonas asaccharolytica
DSM 20707]
gi|332177415|gb|AEE13105.1| Undecaprenyl pyrophosphate synthase [Porphyromonas asaccharolytica
DSM 20707]
Length = 238
Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats.
Identities = 102/236 (43%), Positives = 142/236 (60%), Gaps = 1/236 (0%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
MM P HI IIMDGNGRWA R L R GH++G +V + ++A A+ GI LT++AFS
Sbjct: 1 MMKQQTPQHIAIIMDGNGRWAQRRDLSRSYGHKQGTDVLEKTLSAVADRGIPYLTVYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP SE++ +++L+ L + K +++R IG+ L L+++ +QT
Sbjct: 61 TENWSRPESEVNYIMQLLAEGLHEYTPRFIKEGVRLRAIGDIDQLPAQTAAQLRDSMEQT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVD-SSLIAKYLDTSDVPDPD 183
+ + L IA +YSS E+S AI++I D++SG + S D+ LI YL TS +P PD
Sbjct: 121 KDGQRITLCIALSYSSYTEVSHAIRHIVADVQSGRLSSDDLSRPELINDYLYTSGMPMPD 180
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
L+IRTGGE+RLS+FLL Q AY+E F WPDF AL Y R RRFG +
Sbjct: 181 LLIRTGGEQRLSNFLLLQSAYTELYFTDTLWPDFDEAELDKALADYASRQRRFGKV 236
>gi|46579282|ref|YP_010090.1| undecaprenyl diphosphate synthase [Desulfovibrio vulgaris str.
Hildenborough]
gi|46448696|gb|AAS95349.1| undecaprenyl diphosphate synthase [Desulfovibrio vulgaris str.
Hildenborough]
gi|311233110|gb|ADP85964.1| undecaprenyl diphosphate synthase [Desulfovibrio vulgaris RCH1]
Length = 247
Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats.
Identities = 97/239 (40%), Positives = 135/239 (56%), Gaps = 4/239 (1%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S+ +++ P H+ IIMDGNGRWA RGL R GH+ G E IV A VGI++LT++ F
Sbjct: 10 SVSAAALPAHVAIIMDGNGRWATMRGLSRSEGHKAGTEAARAIVTEARTVGIRHLTMYTF 69
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP SE+ L +L+ FL + +L++ I++ V G L L+ A +
Sbjct: 70 SRENWSRPKSEVKFLFELLVDFLGRELANLERQGIRLNVFGALEDLPMATRMALQHAIGR 129
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T + L +A NYS R+EI RA +++ + V D+ A L T+ PDPD
Sbjct: 130 TAHCDAMMLNLALNYSGREEILRACRSLVTE----GVAPADITEEAFAARLYTAGQPDPD 185
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+IRT GE R+S++LL+Q AYSEF F WPDF+ AL Y R RRFG ++
Sbjct: 186 LVIRTSGEIRISNYLLFQSAYSEFYFTDTLWPDFTPAELHKALETYAGRSRRFGRTQEQ 244
>gi|221066089|ref|ZP_03542194.1| undecaprenyl diphosphate synthase [Comamonas testosteroni KF-1]
gi|220711112|gb|EED66480.1| undecaprenyl diphosphate synthase [Comamonas testosteroni KF-1]
Length = 245
Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats.
Identities = 95/241 (39%), Positives = 138/241 (57%), Gaps = 7/241 (2%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ S + + P HI +IMDGNGRWA R LPR AGH++G+E A E G++ LT+F
Sbjct: 1 MTSKKNGAVPRHIAVIMDGNGRWAKRRLLPRLAGHKQGVESLRRCARACVERGVQVLTVF 60
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+S L+ L+ + L K L ++ +++ +G+R L D + L EAE
Sbjct: 61 AFSSENWNRPQEEVSGLMSLLANALAKEVAQLSRDGVRLYFVGDRQGLSDKVREGLAEAE 120
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T NT L L + FNY R +I++A + + ++ + + + + VPD
Sbjct: 121 RITAHNTRLVLNVCFNYGGRWDIAQAAQKLVAQGL-------ELSPENLDRAMALAHVPD 173
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL+IRTGGE R+S+FLLWQ AY+E F WPDF A+ + R+RRFG S+
Sbjct: 174 PDLMIRTGGETRISNFLLWQAAYTELFFSNALWPDFDEAALDEAIAVFGGRERRFGQTSE 233
Query: 242 K 242
+
Sbjct: 234 Q 234
>gi|239931394|ref|ZP_04688347.1| undecaprenyl phosphate synthetase [Streptomyces ghanaensis ATCC
14672]
gi|291439767|ref|ZP_06579157.1| undecaprenyl pyrophosphate synthetase 1 [Streptomyces ghanaensis
ATCC 14672]
gi|291342662|gb|EFE69618.1| undecaprenyl pyrophosphate synthetase 1 [Streptomyces ghanaensis
ATCC 14672]
Length = 277
Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats.
Identities = 90/235 (38%), Positives = 136/235 (57%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P+H+ I+MDGNGRWA RGLPR GH+ G E +++ A E+G+ ++++AF
Sbjct: 28 KLPGELVPNHVAIVMDGNGRWAKERGLPRTEGHKVGAERVLDVLQGAIEMGVGAISLYAF 87
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + F++K L + ++VR +G L + L+ A++Q
Sbjct: 88 STENWKRSPDEVRFLMNFNRDFIRKSRDQLDELGVRVRWVGRMPKLWKSVAKELQIAQEQ 147
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N L L+ NY R EI+ A + + +D+ +G + V AKYL D+PD D
Sbjct: 148 TKDNDRLTLYFCMNYGGRAEIADAAQALAEDVRAGRLDPSKVTEKTFAKYLYYPDMPDVD 207
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R GE+R S++LLWQ AY+E VF WPDF R + A ++ RDRRFGG
Sbjct: 208 LFLRPSGEQRTSNYLLWQSAYAEMVFQDVLWPDFDRRDLWRACLEFASRDRRFGG 262
>gi|296127608|ref|YP_003634860.1| undecaprenyl diphosphate synthase [Brachyspira murdochii DSM 12563]
gi|296019424|gb|ADG72661.1| undecaprenyl diphosphate synthase [Brachyspira murdochii DSM 12563]
Length = 238
Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats.
Identities = 106/238 (44%), Positives = 144/238 (60%), Gaps = 3/238 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M+ + P H+ IIMDGNGRWA A R GHR G E IV A E+ IK LT++AFS
Sbjct: 1 MIEQNIPIHVAIIMDGNGRWAKAHNKSRSYGHRAGSENVINIVEACGELNIKYLTLYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED-- 122
NW+RP E L +L+K F KK L NNI V+ IG+ D + ++E E
Sbjct: 61 TENWKRPEEEKKALFRLLKEFYKKEIKRLISNNILVKHIGDISLFPKDTIKTIEETEKET 120
Query: 123 -QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ N L + +A NY RDE+ A+KNI ++++ + ++D + I YL T D+PD
Sbjct: 121 LEKCKNPILTVVLALNYGFRDELKNAVKNICYEVKNNKIDIENIDENFIQNYLYTKDMPD 180
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDLIIRT GE RLS+FL++Q +YSE F WPDFS+E F A+ +Y+ R+RR+GGL
Sbjct: 181 PDLIIRTSGEARLSNFLMYQASYSELYFTDILWPDFSKEDFKKAIEEYSNRNRRYGGL 238
>gi|170738973|ref|YP_001767628.1| undecaprenyl diphosphate synthase [Methylobacterium sp. 4-46]
gi|168193247|gb|ACA15194.1| undecaprenyl diphosphate synthase [Methylobacterium sp. 4-46]
Length = 267
Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats.
Identities = 117/238 (49%), Positives = 162/238 (68%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ P H+ IIMDGNGRWAA RGLPR GHR+G+E V AA E GI LT+++FS
Sbjct: 29 KARDIPAHVAIIMDGNGRWAARRGLPRAEGHRRGVEAVRRAVRAALEFGIGYLTVYSFSS 88
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NWRRP +E+++L+ L+K F+++ L N ++VR+IG R L DI +L+EAE++T
Sbjct: 89 ENWRRPAAEVADLMGLLKLFVRRDLADLHANGVRVRIIGAREGLPADIAALLREAEERTA 148
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
NT L L +AFNY R EI RA++++ + ++ G + +D +A LDT +PDPDL+
Sbjct: 149 ANTRLTLVVAFNYGGRQEIVRAVQSLARAVQEGRLAPEAIDLDAVAGALDTRGIPDPDLV 208
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
IRT GE+R+S+FL WQ AYSEFVF+P+ WPDF R F A++ Y R+RRFGGLS +
Sbjct: 209 IRTSGEQRVSNFLTWQTAYSEFVFLPDLWPDFDRAAFAAAIDAYQGRERRFGGLSAQA 266
>gi|225018405|ref|ZP_03707597.1| hypothetical protein CLOSTMETH_02352 [Clostridium methylpentosum
DSM 5476]
gi|224948823|gb|EEG30032.1| hypothetical protein CLOSTMETH_02352 [Clostridium methylpentosum
DSM 5476]
Length = 234
Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats.
Identities = 107/235 (45%), Positives = 160/235 (68%), Gaps = 2/235 (0%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M ++ P HIG+IMDGNGRWA RGLPR AGH G + F +IV A + GI LT++AFS
Sbjct: 1 MENNLPKHIGLIMDGNGRWAKKRGLPRKAGHTVGAQTFRKIVRACNKKGIGYLTVYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP EI ++KL++ +LK+ LK+ NI+ R IG+ D +I ++ EAE+ ++
Sbjct: 61 ENWKRPQEEIDAIIKLLRDYLKEAHKYLKE-NIRTRFIGDLSVFDQEIRDLIVEAEEASK 119
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
TGLNL IA NY R+EI+ A+K I + ++ G++ + ++ ++A +L T+ +P+ DLI
Sbjct: 120 DMTGLNLNIAINYGGRNEITHAVKTIVEQVQQGTLRADEIGEQIVADHLYTAGMPEVDLI 179
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPE-YWPDFSRELFFHALNQYNLRDRRFGGL 239
IR GE RLS+FL+WQ AY+E++F+ + WPDFS + AL ++ R+RRFGG+
Sbjct: 180 IRPSGEYRLSNFLIWQSAYAEYIFMDDILWPDFSEKHLNAALEEFARRNRRFGGI 234
>gi|303247583|ref|ZP_07333854.1| undecaprenyl diphosphate synthase [Desulfovibrio fructosovorans JJ]
gi|302491063|gb|EFL50957.1| undecaprenyl diphosphate synthase [Desulfovibrio fructosovorans JJ]
Length = 238
Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats.
Identities = 105/237 (44%), Positives = 133/237 (56%), Gaps = 4/237 (1%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S S P H+ IIMDGNGRWA RGLPR GHR G E I+ E+GI +LT++AFS
Sbjct: 4 SMSLPRHVAIIMDGNGRWATMRGLPRSEGHRAGTEAARGIITRCRELGIGHLTLYAFSKE 63
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP E+ L L+ FL + L K +I+ R++G L VL +T
Sbjct: 64 NWGRPADEVKFLFDLLVRFLTRETDMLLKQSIRFRLLGEMADLPLAARKVLGHVIAKTAH 123
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
T + L +A NYS RDEI RA +++ + V DV ++ L T+ PDPDLII
Sbjct: 124 CTEMTLNLALNYSGRDEILRACRSLMRQ----GVAPEDVTEERLSAELYTAGQPDPDLII 179
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
RT GEKRLS +LLWQ YSEF F WPDF+ + F AL+ Y R RRFG +
Sbjct: 180 RTSGEKRLSGYLLWQSTYSEFSFPETLWPDFTPDHFEAALHDYQNRTRRFGLTGDQA 236
>gi|259907547|ref|YP_002647903.1| Undecaprenyl pyrophosphate synthetase [Erwinia pyrifoliae Ep1/96]
gi|224963169|emb|CAX54653.1| Undecaprenyl pyrophosphate synthetase [Erwinia pyrifoliae Ep1/96]
gi|283477387|emb|CAY73303.1| undecaprenyl pyrophosphate synthetase [Erwinia pyrifoliae DSM
12163]
Length = 250
Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats.
Identities = 91/237 (38%), Positives = 139/237 (58%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ P H+ IIMDGNGRWA +G R +GH+ G++ V+ A + LT++AFS
Sbjct: 13 QGAGPRHVAIIMDGNGRWAKNQGKLRISGHKAGVKSVRRAVSFAVSRKLDALTLYAFSSE 72
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP E+ L++L L SL K+N+++++IG+ + + ++ AE+ T+
Sbjct: 73 NWNRPQQEVLALMELFVWALDSEVKSLHKHNVRLKIIGDISRFNRRLQGCIRRAEEMTQQ 132
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N GL L IA NY R +I ++ I + ++ G + ++ + +L +D+ DL+I
Sbjct: 133 NNGLTLNIAANYGGRWDIIHGVRKIAEQVQEGLLRPDQIEEDTLGMHLCLNDMAPVDLVI 192
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
RTGGE R+S+FLLWQVAY+EF F WPDF +F ALN + R+RRFGG + G
Sbjct: 193 RTGGEHRISNFLLWQVAYAEFWFTDTLWPDFDEHVFEGALNAFAQRERRFGGATPGG 249
>gi|83951885|ref|ZP_00960617.1| undecaprenyl diphosphate synthase [Roseovarius nubinhibens ISM]
gi|83836891|gb|EAP76188.1| undecaprenyl diphosphate synthase [Roseovarius nubinhibens ISM]
Length = 244
Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats.
Identities = 106/234 (45%), Positives = 155/234 (66%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+S P H+ IIMDGNGRWA +RG PR GH G + EIV ++G+K LT+FAFS N
Sbjct: 11 ASAPRHVAIIMDGNGRWAQSRGRPRLFGHHAGAKRVREIVETCPDLGVKYLTVFAFSTEN 70
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W+R +E++ L+ L + ++ K +L+ + ++VR IG+R+ LD ++ ++ E E T N
Sbjct: 71 WKRTQTEVAGLMSLFRRYITKEARALRDDGVRVRFIGDRVRLDRKLVSMMDELEAMTEGN 130
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
++L IA NY SRDE+ RA+K + +D+ + + DVD +A+YLDT +PDPDL+IR
Sbjct: 131 DRVHLTIALNYGSRDEVGRAMKLMAEDVAANRLSPGDVDDGTLARYLDTRVLPDPDLVIR 190
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
T GE R+S+FLLWQ AY+E+ FI WPDF+ E+F ++ Y RDRRFG +
Sbjct: 191 TSGEARISNFLLWQSAYAEYEFIDTLWPDFTAEIFTGLVHGYAKRDRRFGAVKA 244
>gi|159044044|ref|YP_001532838.1| undecaprenyl diphosphate synthase [Dinoroseobacter shibae DFL 12]
gi|157911804|gb|ABV93237.1| undecaprenyl diphosphate synthase [Dinoroseobacter shibae DFL 12]
Length = 243
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 102/229 (44%), Positives = 147/229 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG PR GH+ G +V A ++GI+ LTIFAFS NW+R
Sbjct: 14 PRHVAIIMDGNGRWAQQRGRPRLFGHQAGARRVRAVVEACPDLGIEYLTIFAFSTENWKR 73
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
SE+S L+ L + ++ K + ++VR IG+R+ LD + ++ E E T N +
Sbjct: 74 TQSEVSGLMGLFRRYITKEMEGFLREGVRVRFIGDRIRLDPKLRELMDEVETLTAHNCRV 133
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL IA NY RDE++RA K + Q++ +G + + VD + + ++LDT +PDPDL+IRT G
Sbjct: 134 NLTIALNYGGRDEVARATKRLAQEVAAGRLDAECVDETTLTRFLDTCVLPDPDLVIRTSG 193
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+FLLWQ AY+E+ FI WPDF+ E+F + ++ R RRFG +
Sbjct: 194 EARISNFLLWQSAYAEYEFIDTLWPDFTPEIFAEVVERFGGRARRFGAV 242
>gi|307546390|ref|YP_003898869.1| undecaprenyl diphosphate synthase [Halomonas elongata DSM 2581]
gi|307218414|emb|CBV43684.1| undecaprenyl diphosphate synthase [Halomonas elongata DSM 2581]
Length = 277
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 96/235 (40%), Positives = 135/235 (57%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+ P H+ IIMDGN RWA A GL GH G+E ++ AAE GI LT+FAFS N
Sbjct: 37 APLPRHVAIIMDGNNRWAKAHGLSGVRGHHAGVEAVRAVIRRAAERGIGTLTLFAFSSEN 96
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W+RP +E+ L++L LK+ L +++I++ V+G R I ++ AE T N
Sbjct: 97 WKRPAAEVHALMELFLMALKREVKKLHEHDIRLSVVGEREGFSSTIQKHIEAAESLTAGN 156
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
TGL+L IA NY R +I++A + + + + +G + +D + L D P DL IR
Sbjct: 157 TGLHLVIAANYGGRWDIAQAARRLGERVGAGELDPASIDERAVQSELCLGDAPPVDLCIR 216
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
T GE R+S+FLLWQ+AY+E F P WPDF E F AL + R RRFG ++
Sbjct: 217 TSGECRISNFLLWQMAYAELYFTPVLWPDFGAEAFDEALVDFAGRQRRFGMTDEQ 271
>gi|78356173|ref|YP_387622.1| undecaprenyl pyrophosphate synthetase [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
gi|78218578|gb|ABB37927.1| Undecaprenyl pyrophosphate synthetase [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
Length = 243
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 100/234 (42%), Positives = 135/234 (57%), Gaps = 4/234 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P HI IIMDGNGRWA ARGL R GH+ G +V E+GI +LT++AFS NW
Sbjct: 11 SLPAHIAIIMDGNGRWATARGLSRSEGHKAGSRAVRTVVTRCRELGISHLTLYAFSQENW 70
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+ L L+ SFL+ ++++ NI++ V G+ +L L A +T NT
Sbjct: 71 GRPKKEVGFLFDLLVSFLRDELPAMERENIRLSVFGDISALPMAARKALDHAMARTARNT 130
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
L+L +A NYS R +I +A + + + DV L + +L T+ PDPDL+IRT
Sbjct: 131 ALHLNLALNYSGRADIVQACRRLM----AAGTSEQDVTEELFSSFLWTAGQPDPDLVIRT 186
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE RLS+FLL+Q AYSE F WPDF E AL+ Y +R RRFG ++
Sbjct: 187 SGEIRLSNFLLYQSAYSELYFTDIAWPDFGSEQLDEALHAYAMRSRRFGRTEEQ 240
>gi|313159537|gb|EFR58900.1| di-trans,poly-cis-decaprenylcistransferase [Alistipes sp. HGB5]
Length = 241
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 101/241 (41%), Positives = 140/241 (58%), Gaps = 1/241 (0%)
Query: 1 MVASMM-SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
M +M + P H+ IIMDGNGRWA RG R GH G+E + AAA G+K LT
Sbjct: 1 MCPNMSEQNRIPQHVAIIMDGNGRWAELRGKERYEGHVAGVEPVRASLRAAARWGVKYLT 60
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++AFS NW RP E+ L++L + L + +++R+IG+R + + L E
Sbjct: 61 LYAFSTENWGRPAQEVDALMELFCKSVVNETPELIRQGVEIRMIGDRTRFSEKVQRYLAE 120
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV 179
AE +T L L +A NYSSR EI+RA++ I SG + ++ I+ LDT+
Sbjct: 121 AEQRTAGGKTLTLILALNYSSRSEITRAVRQIAARAASGELAPEEISEGTISAALDTAPY 180
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
P+PDLI+RT GE RLS+FLLWQ +Y+E F WPDF+ E F A+ +Y RDRRFG +
Sbjct: 181 PNPDLIVRTSGEHRLSNFLLWQASYAELYFPEVLWPDFTEEEFDRAMEEYARRDRRFGLV 240
Query: 240 S 240
Sbjct: 241 K 241
>gi|54296535|ref|YP_122904.1| undecaprenyl pyrophosphate synthase [Legionella pneumophila str.
Paris]
gi|73920264|sp|Q5X7N9|UPPS_LEGPA RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|53750320|emb|CAH11714.1| Undecaprenyl pyrophosphate synthetase [Legionella pneumophila str.
Paris]
Length = 238
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 93/236 (39%), Positives = 143/236 (60%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M+ P HI ++MDGNGRWA +RGLPR GH+ G++ +I+ E I L++FAFS
Sbjct: 1 MNHKLPQHIAVVMDGNGRWAESRGLPRVEGHKAGLDSVKKIINCCLEKKISCLSLFAFSS 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RPV+E++ L++L L+K L ++ I+++ G+R L + + +AE TR
Sbjct: 61 ENWSRPVTEVNFLMELFLEALRKEIDDLNQHGIRLKFTGDREPLSQVLQKQMYDAEALTR 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N L L + NY + +I A K + + G + +++ ++ A++LDTS +P+PDL
Sbjct: 121 NNQQLILNVVVNYGGKWDIVTAAKKLIHSVLDGKLACDEINEAVFAQFLDTSGMPEPDLF 180
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
IRT GE R+S+F LWQ+AY+E F +WPDF+ F AL + R RRFG +S+
Sbjct: 181 IRTSGELRISNFFLWQLAYTELYFTDVHWPDFNEHEFELALTSFARRARRFGQISQ 236
>gi|228470934|ref|ZP_04055779.1| di-trans,poly-cis-decaprenylcistransferase [Porphyromonas uenonis
60-3]
gi|228307331|gb|EEK16345.1| di-trans,poly-cis-decaprenylcistransferase [Porphyromonas uenonis
60-3]
Length = 238
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 100/238 (42%), Positives = 145/238 (60%), Gaps = 1/238 (0%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
MM P HI IIMDGNGRWA RGL R GH++G++ I++A A+ GI LT++AFS
Sbjct: 1 MMKQQTPQHIAIIMDGNGRWAQRRGLSRSYGHKQGVDALETILSAVADRGIPYLTVYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP +E++ +++L+ L K +++R IG+ L + L+++ +QT
Sbjct: 61 TENWNRPEAEVNYIMQLLAEGLHHYTPRFIKEGVRLRAIGDIDQLPAETAAQLRDSMEQT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVD-SSLIAKYLDTSDVPDPD 183
+ + L +A +YSS E+S AI++I D++SG + + D+ LI YL TS +P PD
Sbjct: 121 KDGKRITLGMALSYSSYTEVSHAIQHIVADVQSGRLSNDDLSRPDLINDYLYTSGMPMPD 180
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
L+IRTGGE+RLS+FLL Q AY+E F WPDF AL + LR RRFG + +
Sbjct: 181 LLIRTGGEQRLSNFLLLQSAYTELYFTDTLWPDFDEAELDKALADFALRQRRFGTVPQ 238
>gi|296269160|ref|YP_003651792.1| undecaprenyl diphosphate synthase [Thermobispora bispora DSM 43833]
gi|296091947|gb|ADG87899.1| undecaprenyl diphosphate synthase [Thermobispora bispora DSM 43833]
Length = 261
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 95/235 (40%), Positives = 137/235 (58%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P H+ IIMDGNGRWA ARGLPR GH++G +++ A E+GI L+ FAF
Sbjct: 16 EIPRELLPRHVAIIMDGNGRWAKARGLPRTEGHKRGEYSLFDVIQGAIELGIPYLSAFAF 75
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + +++ L + ++VR G R L ++ L++AE
Sbjct: 76 STENWKRSPEEVRFLMGFNRDVIRRRRDELHEMGVRVRWAGRRTRLWRSVIKELEDAERL 135
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
TR NT L L NY R EI+ A + +D+ +G V + + A+YLD D+PD D
Sbjct: 136 TRNNTTLTLQFCVNYGGRAEITDAAARLARDVAAGRVNPDKITEKVFARYLDEPDIPDVD 195
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L IR+ GE+R+S+FLLWQ AY+E VF+ WPDF R + A + R+RR+GG
Sbjct: 196 LFIRSSGEQRVSNFLLWQSAYAEMVFLDRLWPDFDRRDLWEACRIFAKRERRYGG 250
>gi|73541566|ref|YP_296086.1| undecaprenyl pyrophosphate synthetase [Ralstonia eutropha JMP134]
gi|72118979|gb|AAZ61242.1| Undecaprenyl pyrophosphate synthetase [Ralstonia eutropha JMP134]
Length = 261
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 101/241 (41%), Positives = 149/241 (61%), Gaps = 2/241 (0%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+A S+ P H+ IIMDGNGRWA R LPR AGH +G++ +V A+A G++ LT+F
Sbjct: 13 LAVPDSTYVPRHVAIIMDGNGRWATQRHLPRVAGHSRGLDAVRAVVEASAARGVQFLTLF 72
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP E+S L++L + L++ + N+I++RV+G+ I ++K+AE
Sbjct: 73 AFSSENWRRPADEVSFLMRLFMTALRREVVKMHANSIRLRVVGDLGRFSPRIQQLIKDAE 132
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T NTG+ + IA NY R ++ +A++ + S + +D S++A +L S P+
Sbjct: 133 ARTAGNTGMTVTIAANYGGRWDLLQAMRKML--ARSPMLDPESIDESVLAPHLAMSYAPE 190
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL IRTGGE+R+S+FLLWQ+AYSE F +WPDF A Y R+RRFG S
Sbjct: 191 PDLFIRTGGEQRISNFLLWQLAYSELYFTDVFWPDFDAAELDKAFASYRQRERRFGRTSA 250
Query: 242 K 242
+
Sbjct: 251 Q 251
>gi|225024278|ref|ZP_03713470.1| hypothetical protein EIKCOROL_01153 [Eikenella corrodens ATCC
23834]
gi|224943303|gb|EEG24512.1| hypothetical protein EIKCOROL_01153 [Eikenella corrodens ATCC
23834]
Length = 248
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 94/235 (40%), Positives = 144/235 (61%), Gaps = 6/235 (2%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
++ P H+ +IMDGNGRWA R LPR GH++G+ + A AE+G++ LT+FAFS N
Sbjct: 12 TNIPRHVCVIMDGNGRWAKKRLLPRVMGHKRGLTALENLAARCAELGVEYLTVFAFSTEN 71
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+S L+KL L + +NN++++VIGNR I+ ++ AE T N
Sbjct: 72 WRRPEDEVSFLMKLFLQALDGKVAKMHQNNLRLKVIGNRSRFPATIVKGIEAAERLTADN 131
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
TGL L +A +Y R +I +A + + + ++ +++ L ++ P+PDL IR
Sbjct: 132 TGLTLTVAADYGGRWDILQAANRLIAEGK------SEITEEDLSQRLSLAEAPEPDLFIR 185
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE R+S+F+LWQ+AY+EF F WPDF F A++ + +R+RRFG S++
Sbjct: 186 TGGETRISNFMLWQMAYAEFYFTDALWPDFDAAEFDRAISSFRVRERRFGRTSEQ 240
>gi|254252063|ref|ZP_04945381.1| Di-trans-poly-cis-decaprenylcistransferase [Burkholderia dolosa
AUO158]
gi|124894672|gb|EAY68552.1| Di-trans-poly-cis-decaprenylcistransferase [Burkholderia dolosa
AUO158]
Length = 260
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 100/235 (42%), Positives = 139/235 (59%), Gaps = 1/235 (0%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+ P HI IIMDGNGRWA R LPR AGH +G++ +V A G++ LT+FAFS N
Sbjct: 14 GAVPRHIAIIMDGNGRWATERRLPRVAGHTRGVDAVRAVVEGCARAGVEYLTLFAFSSEN 73
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+S L++L + L++ L N I++RV+G+ + I +++ AE +T N
Sbjct: 74 WRRPTEEVSFLMRLFITALEREVGKLHANGIRLRVVGDLERFEPRIRELIRRAETKTARN 133
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T L L IA NY R +I +A K + + V A +L + P+PDL IR
Sbjct: 134 TRLTLTIAANYGGRWDILQATKKLVEQAAREGREIE-VTEEAFAPHLAMAYAPEPDLFIR 192
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE+R+S+FLLWQ+AY+EF F +YWPDF A+ Y R+RRFG S +
Sbjct: 193 TGGEQRVSNFLLWQLAYAEFYFTDKYWPDFDGAALADAIASYTERERRFGRTSAQ 247
>gi|281356713|ref|ZP_06243204.1| undecaprenyl diphosphate synthase [Victivallis vadensis ATCC
BAA-548]
gi|281316840|gb|EFB00863.1| undecaprenyl diphosphate synthase [Victivallis vadensis ATCC
BAA-548]
Length = 235
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 99/227 (43%), Positives = 132/227 (58%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA RGLP+ GHR+G E++ AA E G++ LT++AFS NW+RP
Sbjct: 7 RHVAIIMDGNGRWAERRGLPKVEGHRQGARQVTEVLKAAQEYGVEFLTLYAFSTENWKRP 66
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
V+E++ L+ L++ F+ L KN I++R IG L L A + T N G
Sbjct: 67 VAEVTALMGLLEEFIDDKLPELMKNGIRLRTIGRTEDLFPGARKKLLHAIEMTEKNNGGT 126
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L +A NY R EI A+ + ++ V YL SD+PDPDL+IRT GE
Sbjct: 127 LNLALNYGGRAEIVDAVNKMAAEMTEKGGRFPKVTEESFRNYLYASDIPDPDLLIRTSGE 186
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
RLS+FLLW+++YSE WPDF ++ F AL Y RDRRFGG
Sbjct: 187 LRLSNFLLWELSYSEMYVTDTLWPDFGKKEFGEALEAYGQRDRRFGG 233
>gi|84516073|ref|ZP_01003433.1| undecaprenyl diphosphate synthase [Loktanella vestfoldensis SKA53]
gi|84509769|gb|EAQ06226.1| undecaprenyl diphosphate synthase [Loktanella vestfoldensis SKA53]
Length = 243
Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats.
Identities = 100/231 (43%), Positives = 149/231 (64%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG PR GH G E++ + E G+K LT+F FS NW+R
Sbjct: 13 PAHVAIIMDGNGRWAQQRGRPRLFGHHAGARRVREVLQSCPEHGVKYLTLFVFSTENWKR 72
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
+E++ L+ + + ++++ +L N ++VR IG+R+ LDD ++ ++ E E T N +
Sbjct: 73 TQTEVAGLMLMFRKYIQREARALVDNGVRVRFIGDRIRLDDKLVSLMDELELLTAGNDLI 132
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L IA NY RDE++RA K + +IE G + DVD+ ++++LDT +PDPDL+IRT G
Sbjct: 133 HLTIALNYGGRDEVTRAAKRLAYEIEMGRLSHKDVDAETLSRFLDTHVLPDPDLVIRTSG 192
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E R+S+FLLWQ AY+E+ F+ WPDF+ F L +Y R+RRFG +
Sbjct: 193 EARISNFLLWQSAYAEYEFVDTLWPDFTAAEFGRVLARYGQRERRFGAVQA 243
>gi|283851249|ref|ZP_06368532.1| undecaprenyl diphosphate synthase [Desulfovibrio sp. FW1012B]
gi|283573418|gb|EFC21395.1| undecaprenyl diphosphate synthase [Desulfovibrio sp. FW1012B]
Length = 240
Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats.
Identities = 101/236 (42%), Positives = 128/236 (54%), Gaps = 4/236 (1%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S + P H+ IIMDGNGRWA RGLPR GHR G E +V E+GI++LT++ FS
Sbjct: 4 SQTLPRHVAIIMDGNGRWATMRGLPRSEGHRAGTEAARGVVTRCRELGIRHLTLYTFSKE 63
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP E+ L L+ FL + +L +I+ +V+G L VL +T
Sbjct: 64 NWGRPADEVKFLFDLLVRFLTRELDTLLTQSIRFQVLGEMADLPLATRKVLAHVIAKTAH 123
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
T + L +A NYS R+EI RA +N+ V DV +A L T+ PDPDLII
Sbjct: 124 CTEMTLNLALNYSGREEILRACRNLVAQ----GVAPGDVTEERLAAALYTAGQPDPDLII 179
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE RLS +LLWQ AYSEF F WPDF+ L Y R RRFG +
Sbjct: 180 RTSGEMRLSGYLLWQSAYSEFAFPDTLWPDFTPAELDAVLADYQTRSRRFGLTGDQ 235
>gi|290960572|ref|YP_003491754.1| undecaprenyl phosphate synthetase [Streptomyces scabiei 87.22]
gi|260650098|emb|CBG73214.1| undecaprenyl phosphate synthetase [Streptomyces scabiei 87.22]
Length = 278
Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats.
Identities = 92/235 (39%), Positives = 136/235 (57%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P H+ I+MDGNGRWA RGLPR GH+ G E +++ + E+G++N++++AF
Sbjct: 28 KLPGELVPKHVAIVMDGNGRWAKERGLPRTEGHKVGAERVLDVLQGSVEIGVRNISLYAF 87
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + F++K L I+VR +G L + L+ A++Q
Sbjct: 88 STENWKRSPDEVRFLMNFNRDFIRKTRDQLDALGIRVRWVGRMPKLWKSVAKELQVAQEQ 147
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N L L+ NY R EI+ A + I +D+ +G + V AKYL D+PD D
Sbjct: 148 TKDNDRLTLYFCMNYGGRAEIADAAQAIAEDVRAGRLDPSKVTEKTFAKYLYYPDMPDVD 207
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R GE+R S++LLWQ AY+E VF WPDF R + A ++ RDRRFGG
Sbjct: 208 LFLRPSGEQRTSNYLLWQSAYAEMVFQDVLWPDFDRRDLWRACVEFASRDRRFGG 262
>gi|328957402|ref|YP_004374788.1| undecaprenyl pyrophosphate synthase [Carnobacterium sp. 17-4]
gi|328673726|gb|AEB29772.1| undecaprenyl pyrophosphate synthase [Carnobacterium sp. 17-4]
Length = 270
Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats.
Identities = 94/235 (40%), Positives = 138/235 (58%), Gaps = 3/235 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
P HI IIMDGNGRWA + +PR AGH++G+ +I A+++G+K L+++AFS N
Sbjct: 36 EKIPHHIAIIMDGNGRWAQKKFMPRIAGHKEGMNTVKKITKRASQMGVKVLSLYAFSTEN 95
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W+RP E+S L++L F L + N++V+V+G L +++A T+ N
Sbjct: 96 WKRPDDEVSFLMQLPVDFFDAFVPELMEQNVQVQVMGFTEQLPKHTREAVEKAIADTKQN 155
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS---DVPDPDL 184
TG+ L A NY R E+ A K + + ++ G + D+ SL + L T D D D
Sbjct: 156 TGMVLNFALNYGGRSELIEASKVLAEKVKVGEIEVEDITESLFEESLMTHALKDYQDVDF 215
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE+R+S+F+LWQ AYSEF F + WPDF+ + A+ Y R RRFGGL
Sbjct: 216 MIRTSGEERISNFMLWQNAYSEFYFSQDLWPDFNEQALEQAIGVYQKRHRRFGGL 270
>gi|212704265|ref|ZP_03312393.1| hypothetical protein DESPIG_02320 [Desulfovibrio piger ATCC 29098]
gi|212672345|gb|EEB32828.1| hypothetical protein DESPIG_02320 [Desulfovibrio piger ATCC 29098]
Length = 240
Score = 279 bits (713), Expect = 3e-73, Method: Composition-based stats.
Identities = 97/233 (41%), Positives = 136/233 (58%), Gaps = 4/233 (1%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IIMDGNGRWA ARGLPR AGHR G E IV +GI++LT++ FS NW
Sbjct: 8 LPVHLAIIMDGNGRWAQARGLPREAGHRAGAETVRTIVTECRRLGIRHLTLYTFSSENWS 67
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP +E+S L L+ FL + ++ I++ ++G+ +L L+ +T NT
Sbjct: 68 RPKTEVSALFSLLLEFLGQEVPRMESEGIRLNILGDMEALPLAARTALRHGLRRTAANTD 127
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ L +A NY R E+ RA++++ + + DV +A +L T+ PDPD +IRT
Sbjct: 128 MVLNLALNYGGRAELVRAVRSMMAE----GLRPEDVTEQSLADHLYTAGQPDPDFLIRTS 183
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+RLS++LL+Q AYSEF F P WPDF E AL Y R RRFG ++
Sbjct: 184 GEQRLSNYLLYQCAYSEFYFTPTPWPDFGVEALHEALAVYAGRSRRFGKTQEQ 236
>gi|83647913|ref|YP_436348.1| undecaprenyl diphosphate synthase [Hahella chejuensis KCTC 2396]
gi|83635956|gb|ABC31923.1| undecaprenyl diphosphate synthase [Hahella chejuensis KCTC 2396]
Length = 274
Score = 279 bits (713), Expect = 3e-73, Method: Composition-based stats.
Identities = 100/238 (42%), Positives = 149/238 (62%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
++ +S P H+ IIMDGN RWA R LP AGH+ G++ +V A G++ LT+FAFS
Sbjct: 8 LVGTSKPRHVAIIMDGNNRWAKQRRLPGVAGHKAGVDSVRAVVETCARHGVEVLTLFAFS 67
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRRP E+ L++L L++ L +NNI++R+IG+R + + +++AE T
Sbjct: 68 SENWRRPEEEVGALMRLFLVALQREVRKLNRNNIRLRIIGDRSKFNSTLQQHMQDAEGLT 127
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NTG+ L IA NY +I++A ++I + +E G + + D+D LI +Y++ D+P PDL
Sbjct: 128 AGNTGMTLAIAANYGGHWDITQAARHIAEKVERGELRAADIDDHLIQQYVELGDLPPPDL 187
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRT GE+R+S+FLLWQ+AY+E F +WPDF E AL Y+ R RRFG +
Sbjct: 188 CIRTAGEQRISNFLLWQLAYTELYFAEVFWPDFRTEQMELALAAYSHRKRRFGQTDDQ 245
>gi|332653364|ref|ZP_08419109.1| di-trans,poly-cis-decaprenylcistransferase [Ruminococcaceae
bacterium D16]
gi|332518510|gb|EGJ48113.1| di-trans,poly-cis-decaprenylcistransferase [Ruminococcaceae
bacterium D16]
Length = 248
Score = 279 bits (713), Expect = 3e-73, Method: Composition-based stats.
Identities = 93/230 (40%), Positives = 133/230 (57%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI IIMDGNGRWA RGLPR AGH G E F I ++G+ LT++AFS NW+
Sbjct: 19 LPRHIAIIMDGNGRWAKKRGLPRTAGHAAGAENFRTIATYCKDIGLDYLTVYAFSTENWK 78
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ ++ L+K +L + ++++ +K+ G+ L ++ + + + ++ G
Sbjct: 79 RPAEEVGAIMGLLKKYLLEAIGRMERDRVKMEFFGDLSPLTPELRELCERTREISKHYEG 138
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ I NY RDE+ RA + QD G + + S + YL + VPDPDL+IR
Sbjct: 139 CQVNICLNYGGRDELLRAARAYAQDCLEGKADPNHLGESEFSDYLFSRGVPDPDLVIRPS 198
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE RLS+FLLWQ AY+EF F WPDFS+E A+ + R RRFGG+
Sbjct: 199 GELRLSNFLLWQSAYAEFYFTDVLWPDFSKEELHKAIAAFQGRSRRFGGV 248
>gi|126439718|ref|YP_001059465.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 668]
gi|126219211|gb|ABN82717.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
pseudomallei 668]
Length = 260
Score = 279 bits (713), Expect = 3e-73, Method: Composition-based stats.
Identities = 98/235 (41%), Positives = 141/235 (60%), Gaps = 1/235 (0%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
++ P HI IIMDGNGRWA R LPR AGH +G++ +V A G++ LT+FAFS N
Sbjct: 14 AAVPRHIAIIMDGNGRWATERRLPRVAGHTRGVDAVRSVVEGCARAGVEYLTLFAFSSEN 73
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+S L++L + L++ L N I++RV+G+ + I +++ E +T N
Sbjct: 74 WRRPNDEVSFLMRLFITALEREVGKLHANGIRLRVVGDLTKFEPRIQALIRRGETKTARN 133
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T L L IA NY R +I +A + + ++ +D A++L + P+PDL IR
Sbjct: 134 TRLTLTIAANYGGRWDILQATRKLVEEAAREGRAPE-IDEDAFARHLAMAYAPEPDLFIR 192
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE+R+S+FLLWQ+AY+EF F +WPDF AL Y R+RRFG S +
Sbjct: 193 TGGEQRISNFLLWQLAYTEFYFTDAFWPDFDAGALAEALASYTHRERRFGRTSAQ 247
>gi|288926940|ref|ZP_06420838.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella buccae D17]
gi|288336299|gb|EFC74682.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella buccae D17]
Length = 253
Score = 279 bits (713), Expect = 3e-73, Method: Composition-based stats.
Identities = 99/249 (39%), Positives = 143/249 (57%), Gaps = 10/249 (4%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + ++ P+HI IIMDGNGRWA RG PR GH+ G+E I + +G+K LT++
Sbjct: 1 MTELDKNNIPEHIAIIMDGNGRWATERGKPRSYGHQAGVEAVRRITSECTRLGVKWLTLY 60
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
FS NW RP E+S L+ L+ S L+ K+N++ RVIG+ L D+ L+
Sbjct: 61 TFSTENWSRPADEVSALMGLVLSSLEDEI--FMKHNVRFRVIGDVGRLPQDVWQKLQMTM 118
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD--------IESGSVCSHDVDSSLIAKY 173
+ T N + + +A +YSSR EI++A++ I + S + V I ++
Sbjct: 119 EHTARNDAMTMVVALSYSSRWEITKALREIVGEALGQAGEGRLSAAGIDDFVTEECIGRH 178
Query: 174 LDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
LDT +PDPDL+IRTGGE R+S++LLWQ+AYSE F YWPDF E A+ Y R
Sbjct: 179 LDTCFMPDPDLLIRTGGELRISNYLLWQIAYSELYFCDTYWPDFGEEELHEAIADYQCRQ 238
Query: 234 RRFGGLSKK 242
RRFG ++
Sbjct: 239 RRFGKTEEQ 247
>gi|90408930|ref|ZP_01217065.1| undecaprenyl pyrophosphate synthetase [Psychromonas sp. CNPT3]
gi|90309958|gb|EAS38108.1| undecaprenyl pyrophosphate synthetase [Psychromonas sp. CNPT3]
Length = 247
Score = 279 bits (713), Expect = 3e-73, Method: Composition-based stats.
Identities = 94/237 (39%), Positives = 140/237 (59%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ P H+ IIMDGNGRWA RG R GH+ G++ + + A E I LT+FAFS
Sbjct: 6 KQTKTPQHVAIIMDGNGRWAEKRGKHRVFGHKHGVKALRKAITFATENKIGALTVFAFSS 65
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP E+ L++L S L L K+ IK+++IG + + EAE T
Sbjct: 66 ENWQRPKQEVKMLMELFFSVLGSEVKKLHKHGIKLKIIGELTGFSSRLQKKVLEAEKLTE 125
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N GL L +A NY R +I++A + + + +E+G++ + VD +++ L S +P DL+
Sbjct: 126 NNQGLILNVAANYGGRWDITQATRTLLERVENGTLKASQVDETMMQDALTLSKIPQVDLM 185
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTGGE R+S+FLLWQ+AY+E F WPDF F AL+ ++ ++RRFG S++
Sbjct: 186 IRTGGEHRISNFLLWQLAYAELYFTDTLWPDFDASDFQFALDVFSGKERRFGQTSEQ 242
>gi|307609307|emb|CBW98786.1| Undecaprenyl pyrophosphate synthetase [Legionella pneumophila 130b]
Length = 238
Score = 279 bits (713), Expect = 3e-73, Method: Composition-based stats.
Identities = 90/236 (38%), Positives = 144/236 (61%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M+ P HI ++MDGNGRWA +RGLPR GH+ G++ +I+ E I L++FAFS
Sbjct: 1 MNHKLPQHIAVVMDGNGRWAESRGLPRVEGHKAGLDSVKKIINCCLEKKISCLSLFAFSS 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RPV+E++ L++L L+K L ++ I+++ G+R L + + +AE T+
Sbjct: 61 ENWSRPVTEVNFLMELFLEALRKEIDDLNQHGIRLKFTGDREPLSQVLQKQMSDAEALTK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N L L + NY + +I A + + + + G + +++ ++ A++LDT+ +P+PDL
Sbjct: 121 NNQQLILNVVVNYGGKWDIVTAARKLIRTVLDGKLAYDEINEAVFAQFLDTNGMPEPDLF 180
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
IRT GE R+S+F LWQ+AY+E F +WPDF+ F AL + R RRFG +S+
Sbjct: 181 IRTSGELRISNFFLWQLAYTELYFTDVHWPDFNEHEFELALISFAKRARRFGQISQ 236
>gi|325681485|ref|ZP_08161011.1| di-trans,poly-cis-decaprenylcistransferase [Ruminococcus albus 8]
gi|324106975|gb|EGC01265.1| di-trans,poly-cis-decaprenylcistransferase [Ruminococcus albus 8]
Length = 242
Score = 279 bits (713), Expect = 3e-73, Method: Composition-based stats.
Identities = 89/230 (38%), Positives = 137/230 (59%), Gaps = 1/230 (0%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
PP H+G+IMDGNGRWA RGLPR GHR+G + F I A VG+ +T +AFS NW+
Sbjct: 14 PPAHVGVIMDGNGRWAKKRGLPRKFGHREGAKTFRTITRHAKAVGVDYITYYAFSTENWK 73
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ ++ L + +L + NI++R IG+R L + + + E+ ++
Sbjct: 74 RPKDEVESIMDLFEKYLD-EVKDFIEENIRIRFIGDRSVLRPSLQEKMLDTEETSKDFDA 132
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ L +A NY RDEI ++K + + ++ G + D+ +I + L T ++P DL+IR
Sbjct: 133 MTLVLAINYGGRDEICHSVKTLAEKVKRGELDPKDITEEMIERNLYTEEIPPLDLVIRPS 192
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE+RLS+F++WQ AY+EF + WPDF F A+ + R+RRFGG+
Sbjct: 193 GEQRLSNFMIWQAAYAEFYYTNILWPDFKNADFDRAILDFCERNRRFGGV 242
>gi|312871365|ref|ZP_07731461.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners
LEAF 3008A-a]
gi|312872485|ref|ZP_07732554.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners
LEAF 2062A-h1]
gi|312873350|ref|ZP_07733403.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners
LEAF 2052A-d]
gi|311091140|gb|EFQ49531.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners
LEAF 2052A-d]
gi|311092067|gb|EFQ50442.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners
LEAF 2062A-h1]
gi|311093117|gb|EFQ51465.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus iners
LEAF 3008A-a]
Length = 239
Score = 279 bits (713), Expect = 3e-73, Method: Composition-based stats.
Identities = 108/230 (46%), Positives = 146/230 (63%), Gaps = 3/230 (1%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA R LPR GHR G+ EI A E+G++ LT++AFS NW RP
Sbjct: 10 HLAIIMDGNGRWAQERHLPRIIGHRSGMNKVKEIALVANELGVRVLTLYAFSTENWGRPR 69
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E++ L+KL +F K L+KNNI+V ++G L ++K+AE +T N G+ L
Sbjct: 70 DEVNYLMKLPINFFDKFMPELQKNNIRVNIMGFNDKLPLATAEIIKKAEQETADNDGMIL 129
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS---DVPDPDLIIRTG 189
AFNY SR E++ AI I DI++ + ++ LI+ YL TS D DPDL+IRT
Sbjct: 130 NFAFNYGSRQEMTAAISKIALDIQNKKIEVDSINEQLISDYLMTSKFGDYADPDLLIRTS 189
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE+RLS+F+LWQ+AYSEF F YWPDF+ + F + +Y RDRRFG +
Sbjct: 190 GEERLSNFMLWQLAYSEFYFTKTYWPDFTTDEFKKIVEEYQHRDRRFGKI 239
>gi|317056782|ref|YP_004105249.1| undecaprenyl diphosphate synthase [Ruminococcus albus 7]
gi|315449051|gb|ADU22615.1| undecaprenyl diphosphate synthase [Ruminococcus albus 7]
Length = 242
Score = 279 bits (713), Expect = 3e-73, Method: Composition-based stats.
Identities = 90/230 (39%), Positives = 137/230 (59%), Gaps = 1/230 (0%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
PP H+G+IMDGNGRWA RGLPR GHR+G + F I A VGI +T +AFS NW+
Sbjct: 14 PPVHVGVIMDGNGRWAKKRGLPRKFGHREGAKNFRSITKHAKAVGIDYITFYAFSTENWK 73
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ ++ L + +L + NI++R IG+R L + ++ E+ ++
Sbjct: 74 RPKDEVDAIMDLFEKYLD-EVEDFIEENIRIRFIGDRSQLKPSLQAKMRHTEETSKDFDA 132
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ L +A NY RDEI ++K + + ++ G + D+ +I + L T ++P DL+IR
Sbjct: 133 MTLVLAINYGGRDEICHSVKTLAEQVKRGELDPQDITEDMIERNLYTEEIPPLDLVIRPS 192
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE+RLS+F++WQ AY+EF + WPDF F A+ + R+RRFGG+
Sbjct: 193 GEQRLSNFMIWQAAYAEFYYTNILWPDFKNADFDRAILDFCERNRRFGGI 242
>gi|18977971|ref|NP_579328.1| undecaprenyl diphosphate synthase [Pyrococcus furiosus DSM 3638]
gi|42559842|sp|Q8U0I8|UPPS_PYRFU RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|18893747|gb|AAL81723.1| undecaprenyl diphosphate synthase [Pyrococcus furiosus DSM 3638]
Length = 264
Score = 279 bits (713), Expect = 3e-73, Method: Composition-based stats.
Identities = 90/240 (37%), Positives = 138/240 (57%), Gaps = 2/240 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + + P H+ IIMDGN RWA R P GH G + EIV E+GI+ LT+
Sbjct: 25 LLEKVKAGVIPKHVAIIMDGNRRWARKREKPPWYGHFFGSKKLEEIVEWCHELGIRILTV 84
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFS N++R E+ L+KL + ++ + + I+V V+G + L ++ +
Sbjct: 85 YAFSTENFKRSKEEVDRLMKLFEEKFRELVTDRRVHEYGIRVNVMGRKELLPKNVREAAE 144
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
EAE TR L IA Y R EI AIK+I D+ G + D++ ++ KYL +
Sbjct: 145 EAERVTRKYNNYFLNIALAYGGRSEIVDAIKDIVNDVLEGRLKLEDINEEIVRKYLYVPN 204
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+PDPD++IRTGGE R+S+FLL+Q+AYSE F+ Y+P+F + F + ++ R+RRFG
Sbjct: 205 MPDPDIVIRTGGEVRISNFLLYQIAYSELFFVDVYFPEFRKIDFLRIIREFQKRERRFGR 264
>gi|114327600|ref|YP_744757.1| undecaprenyl pyrophosphate synthetase [Granulibacter bethesdensis
CGDNIH1]
gi|114315774|gb|ABI61834.1| undecaprenyl pyrophosphate synthetase [Granulibacter bethesdensis
CGDNIH1]
Length = 244
Score = 279 bits (713), Expect = 3e-73, Method: Composition-based stats.
Identities = 107/232 (46%), Positives = 153/232 (65%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
++ P HIGIIMDGNGRWAAARGLPR AGHR G + +V AA E I LT++AFS
Sbjct: 10 AAPLPVHIGIIMDGNGRWAAARGLPRIAGHRAGAQAVRRVVQAAIEARIGWLTLYAFSSE 69
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+++L L++ +++ L +N +++ +IG+R DI L +AE +T
Sbjct: 70 NWRRPAGEVTDLTGLLRHYIRSEINELAENGVRLHIIGDRSRFSQDIQNDLAQAERRTAG 129
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NT L+L IA +Y +R EI A+++ + + +G + +D +L + +L T+ +PDPDLII
Sbjct: 130 NTVLHLVIALSYGARAEIINAVRSAAKALAAGHMVPEALDEALFSSFLSTAGMPDPDLII 189
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
RT GE+RLS+FLLWQ AY+E VF+ WPDF+ F AL ++ R+RRFG
Sbjct: 190 RTSGERRLSNFLLWQAAYAELVFMDVLWPDFASVHFQQALAEFGRRERRFGA 241
>gi|315607042|ref|ZP_07882046.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella buccae ATCC
33574]
gi|315251096|gb|EFU31081.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella buccae ATCC
33574]
Length = 253
Score = 278 bits (712), Expect = 3e-73, Method: Composition-based stats.
Identities = 99/249 (39%), Positives = 143/249 (57%), Gaps = 10/249 (4%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + ++ P+HI IIMDGNGRWA RG PR GH+ G+E I + +G+K LT++
Sbjct: 1 MTELDKNNIPEHIAIIMDGNGRWATERGKPRSYGHQAGVEAVRRITSECTRLGVKWLTLY 60
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
FS NW RP E+S L+ L+ S L+ K+N++ RVIG+ L D+ L+
Sbjct: 61 TFSTENWSRPADEVSALMGLVLSSLEDEI--FMKHNVRFRVIGDVGRLPQDVWQKLQMTM 118
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD--------IESGSVCSHDVDSSLIAKY 173
+ T N + + +A +YSSR EI++A++ I + S + V I ++
Sbjct: 119 EHTARNNAMTMVVALSYSSRWEITKALREIVGEALGQAGEGRLSAAGIDDFVTEECIGRH 178
Query: 174 LDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
LDT +PDPDL+IRTGGE R+S++LLWQ+AYSE F YWPDF E A+ Y R
Sbjct: 179 LDTCFMPDPDLLIRTGGELRISNYLLWQIAYSELYFCDTYWPDFGEEELHEAIADYQCRQ 238
Query: 234 RRFGGLSKK 242
RRFG ++
Sbjct: 239 RRFGKTEEQ 247
>gi|156743851|ref|YP_001433980.1| undecaprenyl diphosphate synthase [Roseiflexus castenholzii DSM
13941]
gi|156235179|gb|ABU59962.1| undecaprenyl diphosphate synthase [Roseiflexus castenholzii DSM
13941]
Length = 236
Score = 278 bits (712), Expect = 3e-73, Method: Composition-based stats.
Identities = 101/236 (42%), Positives = 145/236 (61%), Gaps = 4/236 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+ P HI IIMDGNGRWA R LPR AGHR G E IV AE G++ LT++AFS N
Sbjct: 5 ARIPRHIAIIMDGNGRWARQRHLPRLAGHRAGTENIRRIVTECAEQGVQYLTLYAFSTEN 64
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP +E+ L++++ F+ + +L + ++R +G ++ ++ + +A + TR N
Sbjct: 65 WSRPSAEVDGLMRILSDFIDRETINLHREGARLRHLGRLDNISAELRQKILDAIELTRHN 124
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T + L +AFNY R +I A++ + + V + DV +I+ +L T +PDPDLIIR
Sbjct: 125 TRITLAVAFNYGGRADIVDAVRELI----ALGVNADDVTEKMISDHLSTRGMPDPDLIIR 180
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
T GE RLS+FL+WQ AYSE+ YWPDFS E A++ Y R RRFGGLS++
Sbjct: 181 TSGEWRLSNFLIWQAAYSEYWTTSVYWPDFSPEHLRQAIHDYGQRQRRFGGLSEES 236
>gi|312796248|ref|YP_004029170.1| Undecaprenyl pyrophosphate synthetase [Burkholderia rhizoxinica HKI
454]
gi|312168023|emb|CBW75026.1| Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) [Burkholderia
rhizoxinica HKI 454]
Length = 280
Score = 278 bits (712), Expect = 4e-73, Method: Composition-based stats.
Identities = 103/233 (44%), Positives = 142/233 (60%), Gaps = 1/233 (0%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI IIMDGNGRWA R LPR AGH KG++ IV A A G++ LT+FAFS NWR
Sbjct: 36 VPRHIAIIMDGNGRWAQRRRLPRVAGHTKGLDAVRTIVEACAARGVEFLTLFAFSSENWR 95
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RPV E+S L++L S L++ L N I++ V+G+ + I +++ A+ +T NTG
Sbjct: 96 RPVDEVSFLMRLFISALEREIARLHTNGIRLHVVGDLSMFEPRIQELVRRAQAKTAANTG 155
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L IA NY R +I +A + I Q +VD + ++L + P+PDL IRTG
Sbjct: 156 LTLTIAANYGGRWDILQATRKIAQQCVDAG-AMQNVDEASFTQHLAMAYAPEPDLFIRTG 214
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+R+S+FLLWQ+AY+E F +WPDF+ A+ Y R+RRFG S +
Sbjct: 215 GEQRVSNFLLWQLAYTELYFTDVFWPDFNDAELSKAIASYRERERRFGRTSAQ 267
>gi|189425768|ref|YP_001952945.1| undecaprenyl pyrophosphate synthase [Geobacter lovleyi SZ]
gi|189422027|gb|ACD96425.1| undecaprenyl diphosphate synthase [Geobacter lovleyi SZ]
Length = 246
Score = 278 bits (712), Expect = 4e-73, Method: Composition-based stats.
Identities = 101/238 (42%), Positives = 145/238 (60%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P H+ IIMDGNGRWA R L R GH++G E +V A+ +GI LT+FAFS
Sbjct: 4 LDPTKMPRHLAIIMDGNGRWAEQRMLKRIVGHQRGAETVQMVVDQASGLGISYLTLFAFS 63
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP E+ L+ L+K +++ + KNNI+ VIGNR L ++ +L +A QT
Sbjct: 64 SENWSRPKLEVRALMALLKKYIRNELRRMLKNNIRFNVIGNRADLPSEVNEILDDALRQT 123
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NTG+ L +A +Y R EI+RA I Q ++ G + + ++ ++YLDT+ +PDPDL
Sbjct: 124 ASNTGMVLTLALSYGGRQEIARAAARIAQQVQDGKLQPSQITEAVFSQYLDTAGLPDPDL 183
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IRT GE R+S+FLLWQ+AY+E F WPD + AL + R+RRFG S +
Sbjct: 184 LIRTSGEMRISNFLLWQLAYAELYFTDINWPDLTINALHAALADFQARERRFGKTSAQ 241
>gi|54293493|ref|YP_125908.1| undecaprenyl pyrophosphate synthetase [Legionella pneumophila str.
Lens]
gi|73920266|sp|Q5WZ40|UPPS_LEGPL RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|53753325|emb|CAH14772.1| Undecaprenyl pyrophosphate synthetase [Legionella pneumophila str.
Lens]
Length = 238
Score = 278 bits (712), Expect = 4e-73, Method: Composition-based stats.
Identities = 90/236 (38%), Positives = 144/236 (61%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M+ P HI ++MDGNGRWA +RGLPR GH+ G++ +I+ E I L++FAFS
Sbjct: 1 MNHKLPQHIAVVMDGNGRWAESRGLPRVEGHKAGLDSVKKIINCCLEKKISCLSLFAFSS 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RPV+E++ L++L L+K L ++ I+++ G+R L + + +AE T+
Sbjct: 61 ENWSRPVTEVNFLMELFLEALRKEIDDLNQHGIRLKFTGDREPLSQVLQKQMSDAEALTK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N L L + NY + +I A + + + + G + +++ ++ A++LDT +P+PDL
Sbjct: 121 NNQQLILNVVVNYGGKWDIVTAARKLIRTVLDGKLAYDEINEAVFAQFLDTKGMPEPDLF 180
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
IRT GE R+S+F LWQ+AY+E F +WPDF+ F AL ++ R RRFG +S+
Sbjct: 181 IRTSGELRISNFFLWQLAYTELYFTDVHWPDFNEHEFELALISFSKRARRFGQISQ 236
>gi|227872427|ref|ZP_03990771.1| undecaprenyl diphosphate synthase [Oribacterium sinus F0268]
gi|227841724|gb|EEJ52010.1| undecaprenyl diphosphate synthase [Oribacterium sinus F0268]
Length = 245
Score = 278 bits (712), Expect = 4e-73, Method: Composition-based stats.
Identities = 99/237 (41%), Positives = 140/237 (59%), Gaps = 2/237 (0%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ S P HI II+DGNGRWAA+ LPR GH+KG E + V A +GI+ LT++ F
Sbjct: 6 NQEQRSLPRHIAIILDGNGRWAASHALPRALGHKKGCETLEQTVEDCARLGIEYLTVYGF 65
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L++L + ++KK NN++ ++IG R +DI + E E+
Sbjct: 66 STENWKRSEEEVGALMQLFRFYMKKLITVANANNVRAKMIGERSRFPEDIQKGISELEES 125
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCS--HDVDSSLIAKYLDTSDVPD 181
T+ NTG+ A NY RDE+ RAI+ I + + + + + YLDT+ PD
Sbjct: 126 TKANTGMLFSFAVNYGGRDEMIRAIRKIALESDPSELSEKLSHLTEEEFSNYLDTAGTPD 185
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PDL+IRT GE R S+FLLWQ AY+E+ YWPDF+ E A++ Y R+RRFGG
Sbjct: 186 PDLVIRTSGEFRTSNFLLWQSAYAEYYISSVYWPDFNLEELKKAISSYQNRERRFGG 242
>gi|332284283|ref|YP_004416194.1| undecaprenyl pyrophosphate synthetase [Pusillimonas sp. T7-7]
gi|330428236|gb|AEC19570.1| undecaprenyl pyrophosphate synthetase [Pusillimonas sp. T7-7]
Length = 250
Score = 278 bits (712), Expect = 4e-73, Method: Composition-based stats.
Identities = 96/236 (40%), Positives = 147/236 (62%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S+ P H+ IIMDGNGRWA R LPR AGH +G++ +V A E G+K LT+FAFS
Sbjct: 12 STDTPQHVAIIMDGNGRWATKRFLPRTAGHMRGVQAVRRVVEACGERGVKYLTLFAFSSE 71
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+S L++L L+K L+K +++ ++G+ + + + +++EA+ +T
Sbjct: 72 NWRRPKEEVSVLMRLFMQTLEKQVGKLEKQGVRLHIVGDLSAFEPRLQDMIQEAQVRTAA 131
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N L+L IA NY R +I +A++ + + + ++ S +A+YL + P+PDL I
Sbjct: 132 NDALHLTIAANYGGRWDILQALRKLLAAQPELAASTQPIEESQLAQYLSMAYAPEPDLFI 191
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE+R+S+FL+WQ+AY+E F +YWPDF + A Y R+RRFG S +
Sbjct: 192 RTGGEQRISNFLIWQLAYTELYFSDDYWPDFGAKEIDTAFAWYRTRERRFGRTSAQ 247
>gi|268610454|ref|ZP_06144181.1| undecaprenyl pyrophosphate synthetase [Ruminococcus flavefaciens
FD-1]
Length = 246
Score = 278 bits (712), Expect = 4e-73, Method: Composition-based stats.
Identities = 88/235 (37%), Positives = 144/235 (61%), Gaps = 1/235 (0%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
++ PDH+G IMDGNGRWA RGLPR GHR+G + F +IV ++G+KN++ +AFS
Sbjct: 13 VLPDKLPDHVGFIMDGNGRWAKKRGLPRSFGHREGAKQFKKIVRYCKDIGLKNISFYAFS 72
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E++ +++L + ++ L + N ++ +G++ + D+D+ + + E+ T
Sbjct: 73 TENWQRPAEEVNTIMELFRDYIVDVRNFLSE-NTRMIFLGDKSAFDEDLQEKMIKLEEDT 131
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ L +A NY RDEI+ A + + + G + D+ I+ L T+ PD DL
Sbjct: 132 AKYDEMTLMMAVNYGGRDEITHAARILAEKAAKGEIKPEDITEQSISDNLYTAGFPDVDL 191
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IR GE+R+S++L+WQ AY+EF + WPDF+ + AL +Y R+RRFGG+
Sbjct: 192 LIRPSGEQRISNYLIWQCAYAEFYYTDVLWPDFTPDELDKALAEYARRNRRFGGV 246
>gi|159896710|ref|YP_001542957.1| undecaprenyl diphosphate synthase [Herpetosiphon aurantiacus ATCC
23779]
gi|159889749|gb|ABX02829.1| undecaprenyl diphosphate synthase [Herpetosiphon aurantiacus ATCC
23779]
Length = 244
Score = 278 bits (712), Expect = 4e-73, Method: Composition-based stats.
Identities = 96/237 (40%), Positives = 139/237 (58%), Gaps = 4/237 (1%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
V + ++ P H+ IIMDGNGRWA RGLPR AGH G IV A +GI LTI+
Sbjct: 3 VQQLETTVAPRHVAIIMDGNGRWAQGRGLPRLAGHHAGTGNIKRIVREAISLGIPYLTIY 62
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E+ L++++ +L + L +++ ++G +D + ++ A
Sbjct: 63 AFSTENWKRPSWEVRGLMRIMAEYLDRELRELHAEGVRLHLLGTLEGVDSALAKKIQNAI 122
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T NT L L +AFNY R +I A++ I + D+ +IA +L TS +PD
Sbjct: 123 TMTANNTALTLSVAFNYGGRADIVNAVREIVAK----GINPEDISDEMIAGHLYTSGIPD 178
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PDLI+RT GE+RLS+FL+WQ AYSE+ P WPDF + F A++ + R+RR+GG
Sbjct: 179 PDLIVRTSGEQRLSNFLIWQAAYSEYYMTPLLWPDFGPDQFREAVSNFGNRERRYGG 235
>gi|254179325|ref|ZP_04885924.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 1655]
gi|254189289|ref|ZP_04895800.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei
Pasteur 52237]
gi|254297209|ref|ZP_04964662.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 406e]
gi|157807737|gb|EDO84907.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 406e]
gi|157936968|gb|EDO92638.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei
Pasteur 52237]
gi|184209865|gb|EDU06908.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 1655]
Length = 251
Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats.
Identities = 98/235 (41%), Positives = 141/235 (60%), Gaps = 1/235 (0%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
++ P HI IIMDGNGRWA R LPR AGH +G++ +V A G++ LT+FAFS N
Sbjct: 5 AAVPRHIAIIMDGNGRWATERRLPRVAGHTRGVDAVRSVVEGCARAGVEYLTLFAFSSEN 64
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+S L++L + L++ L N I++RV+G+ + I +++ E +T N
Sbjct: 65 WRRPNDEVSFLMRLFITALEREVGKLHANGIRLRVVGDLTKFEPRIQALIRRGETKTARN 124
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T L L IA NY R +I +A + + ++ +D A++L + P+PDL IR
Sbjct: 125 TRLTLTIAANYGGRWDILQATRKLVEEAAREGRAPE-IDEDAFARHLAMAYAPEPDLFIR 183
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE+R+S+FLLWQ+AY+EF F +WPDF AL Y R+RRFG S +
Sbjct: 184 TGGEQRISNFLLWQLAYTEFYFTDTFWPDFDAGALAEALASYTHRERRFGRTSAQ 238
>gi|160902093|ref|YP_001567674.1| undecaprenyl diphosphate synthase [Petrotoga mobilis SJ95]
gi|160359737|gb|ABX31351.1| undecaprenyl diphosphate synthase [Petrotoga mobilis SJ95]
Length = 245
Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats.
Identities = 102/240 (42%), Positives = 139/240 (57%), Gaps = 6/240 (2%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
SM S P H+GIIMDGNGRWA G R GH++G E +++ + E GI LT++ F
Sbjct: 5 SMKLSKVPAHVGIIMDGNGRWATKSGYDRNYGHQRGAETALKVIEWSKEFGINYLTLYTF 64
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP +EI L L+ + + + +N + VR +G L + ++ KE ED
Sbjct: 65 SEENWKRPQNEIEFLFDLLIRYFEDNLKRIIENGVNVRFLGRINKLPESLIKTCKEIEDI 124
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
++ N NL A NYS R EI A+ I ++ ++ + I L DVP PD
Sbjct: 125 SKNNKDFNLIFALNYSGRQEIVDAVNKILKEKKTT------ITKEDIDSNLYLPDVPYPD 178
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
LIIRT GE+RLS+FLLWQ AYSE F WPDFS + +F+AL Y+ R+RRFGG+S K
Sbjct: 179 LIIRTAGEERLSNFLLWQSAYSELYFTETLWPDFSYDDYFNALLDYSKRERRFGGISSKS 238
>gi|115352099|ref|YP_773938.1| undecaprenyl diphosphate synthase [Burkholderia ambifaria AMMD]
gi|171318102|ref|ZP_02907271.1| undecaprenyl diphosphate synthase [Burkholderia ambifaria MEX-5]
gi|172060963|ref|YP_001808615.1| undecaprenyl diphosphate synthase [Burkholderia ambifaria MC40-6]
gi|115282087|gb|ABI87604.1| Undecaprenyl pyrophosphate synthetase [Burkholderia ambifaria AMMD]
gi|171096726|gb|EDT41611.1| undecaprenyl diphosphate synthase [Burkholderia ambifaria MEX-5]
gi|171993480|gb|ACB64399.1| undecaprenyl diphosphate synthase [Burkholderia ambifaria MC40-6]
Length = 260
Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats.
Identities = 100/235 (42%), Positives = 138/235 (58%), Gaps = 1/235 (0%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+ P HI IIMDGNGRWA R LPR AGH +G++ +V A G++ LT+FAFS N
Sbjct: 14 GAVPRHIAIIMDGNGRWATERRLPRVAGHTRGVDAVRAVVEGCARAGVEYLTLFAFSSEN 73
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+S L++L + L++ L N I++RV+G+ + I +++ AE +T N
Sbjct: 74 WRRPNDEVSFLMRLFITALEREIGKLHANGIRLRVVGDLERFEPRIRELIRRAETKTARN 133
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T L L IA NY R +I +A + DV A +L + P+PDL IR
Sbjct: 134 TRLTLTIAANYGGRWDILQAT-KKLVEQAVREGREVDVTEDAFAPHLAMAYAPEPDLFIR 192
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE+R+S+FLLWQ+AY+EF F +YWPDF A+ Y R+RRFG S +
Sbjct: 193 TGGEQRVSNFLLWQLAYAEFYFTDKYWPDFDGAALADAIASYTERERRFGRTSAQ 247
>gi|167586859|ref|ZP_02379247.1| undecaprenyl diphosphate synthase [Burkholderia ubonensis Bu]
Length = 260
Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats.
Identities = 100/235 (42%), Positives = 140/235 (59%), Gaps = 1/235 (0%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+ P HI IIMDGNGRWA R LPR AGH +G++ +V A VG++ LT+FAFS N
Sbjct: 14 GAVPRHIAIIMDGNGRWATERRLPRVAGHTRGVDAVRAVVEGCARVGVEYLTLFAFSSEN 73
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+S L++L + L++ L N I++RV+G+ + I +++ AE +T N
Sbjct: 74 WRRPTDEVSFLMRLFITALEREVGKLHANGIRLRVVGDLDRFEPRIQALIRRAETKTARN 133
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T L L IA NY R +I +A + + + V A +L + P+PDL IR
Sbjct: 134 TRLTLTIAANYGGRWDILQATRKLVEQAAREGREVE-VSEDSFAPHLAMAYAPEPDLFIR 192
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE+R+S+FLLWQ+AY+EF F ++WPDF AL Y R+RRFG S +
Sbjct: 193 TGGEQRISNFLLWQLAYTEFYFTDKFWPDFDGAALTDALASYTDRERRFGRTSAQ 247
>gi|284008515|emb|CBA75034.1| undecaprenyl pyrophosphate synthetase [Arsenophonus nasoniae]
Length = 251
Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats.
Identities = 95/234 (40%), Positives = 139/234 (59%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
P H+ IIMDGNGRWA G R GHR G E + V A E I++LT++AFS
Sbjct: 11 QQRIPRHVAIIMDGNGRWAKLHGKLRIKGHRAGTEAVQKAVKFAIENEIQSLTLYAFSSE 70
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP +E+S L++L FL +L +N+K+ +IG+ + +K A + T
Sbjct: 71 NWSRPETEVSALMELFTWFLDDEVKNLNIHNVKLTIIGDIGRFKPKLQNRIKHAVELTAN 130
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTGL L IA NY R +I+ A++ I + I++GS+ + +++ + +++ + P DL+I
Sbjct: 131 NTGLQLNIAANYGGRWDITNAVRLIAEKIKAGSLLAENINEDTVNEFISLHEQPTVDLVI 190
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RTG E R+S+FLLWQ+AY+EF F WPDF E F A+ +N R+RRFG
Sbjct: 191 RTGREYRISNFLLWQIAYAEFYFTDVLWPDFDEEAFKSAIVAFNKRERRFGNTE 244
>gi|113868030|ref|YP_726519.1| undecaprenyl pyrophosphate synthetase [Ralstonia eutropha H16]
gi|113526806|emb|CAJ93151.1| undecaprenyl pyrophosphate synthetase [Ralstonia eutropha H16]
Length = 256
Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats.
Identities = 100/236 (42%), Positives = 146/236 (61%), Gaps = 2/236 (0%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+S P H+ IIMDGNGRWA R LPR AGH +G++ +V A+A G++ LT+FAFS
Sbjct: 13 TSYVPRHVAIIMDGNGRWATQRHLPRVAGHTRGLDAVRAVVEASAARGVQFLTLFAFSSE 72
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+S L++L L++ + NNI++RV+G+ I ++++AE +T
Sbjct: 73 NWRRPADEVSFLMRLFMMALRREVVKMHANNIRLRVVGDLARFSPRIQQLIRDAEARTAG 132
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTGL + IA NY R ++ +A++ + S + +D S++A +L + P+PDL I
Sbjct: 133 NTGLTVTIAANYGGRWDLLQAMRKML--ARSPMLDPASIDESVLAPHLAMAYAPEPDLFI 190
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE+R+S+FLLWQ+AYSE F +WPDF A Y R+RRFG S +
Sbjct: 191 RTGGEQRISNFLLWQLAYSELYFTDVFWPDFDAAELDKAFASYRQRERRFGRTSAQ 246
>gi|312959396|ref|ZP_07773913.1| di-trans-poly-cis-decaprenylcistransferase [Pseudomonas fluorescens
WH6]
gi|311286113|gb|EFQ64677.1| di-trans-poly-cis-decaprenylcistransferase [Pseudomonas fluorescens
WH6]
Length = 251
Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats.
Identities = 91/237 (38%), Positives = 139/237 (58%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ S P H+ IIMDGN RWA R +P AGH+ G++ ++ AE ++ LT+FAFS
Sbjct: 8 VPSVVPRHVAIIMDGNNRWAKKRFMPGVAGHKAGVDAVRAVIEVCAEAKVEVLTLFAFSS 67
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP E++ L+ L L++ L N I +R+IG+R ++ ++EAE T
Sbjct: 68 ENWQRPADEVTALMDLFFKALRREAKRLNDNKISLRIIGDRSRFHPELQAAMREAEAITA 127
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
L IA NY + +I++A + + +++++G + D+ L+ L T D+P PDL
Sbjct: 128 GADRFVLQIAANYGGQWDIAQAAQRLAREVQAGHLRPDDITPELLQTCLVTGDLPLPDLC 187
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTGGE R+S+FLLWQ+AY+E F +WPDF + AL + R RRFG S++
Sbjct: 188 IRTGGEHRISNFLLWQLAYTELYFSDLFWPDFKHDAMRTALADFASRQRRFGKTSEQ 244
>gi|34540046|ref|NP_904525.1| undecaprenyl pyrophosphate synthase [Porphyromonas gingivalis W83]
gi|42559746|sp|Q7MXJ4|UPPS_PORGI RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|34396357|gb|AAQ65424.1| undecaprenyl diphosphate synthase [Porphyromonas gingivalis W83]
Length = 254
Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats.
Identities = 96/233 (41%), Positives = 143/233 (61%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI ++MDGNGRWA RG RC GH G++ + AAA G++ LT + FS NW
Sbjct: 14 VPRHIALVMDGNGRWAKIRGKERCEGHAAGVDALRVALRAAAGCGVEYLTAYTFSTENWN 73
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ L+ L + + L NNI++ IG+ L +D+ L++ +T NTG
Sbjct: 74 RPEEEVRALMGLFVTAIMNEMLDLMTNNIRLLAIGDFSRLPEDVRESLEKGIRETAGNTG 133
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L +A +YSSR E++ I+ + + + GSV D++ L++ +L T+ +PDPDL IRTG
Sbjct: 134 LTLVLALSYSSRWEMTDVIRRLARKVRDGSVEPEDINVDLVSDHLSTAGIPDPDLFIRTG 193
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GEKR+S+FL+WQ+AY+E F WPDF + A+ +Y+ R+RRFG S++
Sbjct: 194 GEKRISNFLMWQMAYTELFFTDTLWPDFDADCLKAAIEEYSSRERRFGKTSEQ 246
>gi|84686916|ref|ZP_01014800.1| undecaprenyl diphosphate synthase [Maritimibacter alkaliphilus
HTCC2654]
gi|84665113|gb|EAQ11593.1| undecaprenyl diphosphate synthase [Rhodobacterales bacterium
HTCC2654]
Length = 243
Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats.
Identities = 98/228 (42%), Positives = 148/228 (64%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA RG PR GH G + E+V A ++G+ ++T+FAFS NW+R
Sbjct: 14 HVAIIMDGNGRWAKERGRPRLFGHHAGAKRAREVVEACPDLGVTHITLFAFSTENWKRTQ 73
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+E++ L+ L + ++ K + L VR IG+R+ LD + ++ + ED T+ N +++
Sbjct: 74 AEVAGLMSLFRRYINKTAHELNDEGACVRFIGDRIKLDPKLRRLMDDLEDLTKDNDRVHV 133
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A NY RDE++RA + + QD+++G + +D + KYLDT +PDPDL+IRT GE
Sbjct: 134 TVALNYGGRDEVARATQRLAQDVKAGKLDPDTIDEETLPKYLDTCMLPDPDLVIRTSGEA 193
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
R+S+FLLWQ AY+E+ FI WPDF R F L+++ +RDRRFG +
Sbjct: 194 RVSNFLLWQSAYAEYEFIDTLWPDFDRAKFAEILDRFAMRDRRFGAVK 241
>gi|312136819|ref|YP_004004156.1| undecaprenyl pyrophosphate synthetase [Methanothermus fervidus DSM
2088]
gi|311224538|gb|ADP77394.1| Undecaprenyl pyrophosphate synthetase [Methanothermus fervidus DSM
2088]
Length = 255
Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats.
Identities = 89/241 (36%), Positives = 141/241 (58%), Gaps = 3/241 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARG-LPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ ++ + P H+ IIMDGN R+A G GH+KG++ +++ E+GIK +T
Sbjct: 15 LKRNLDKNKIPKHVAIIMDGNRRYARLIGSKDPTIGHKKGVKTLEKLLDWCIELGIKIVT 74
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
++AFS N++RP E+ +L+KL + K+ + KN I+V+ IG L ++ +
Sbjct: 75 VYAFSTENFKRPKHEVKKLMKLFEENFKRIKTDKKIHKNKIRVKAIGKLELLPKNLRKAI 134
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
KEAE+ T+ L +A Y R EI A+K I + ++ G + ++++ ++ K+L T+
Sbjct: 135 KEAEEATKHYKERLLNVAIGYDGRQEIVDAVKKIAKKVKEGKLSLNEINEEVVDKHLYTA 194
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+V DP LIIRT GE+RLS FLLWQ +YSE F WP+F + F A+ Y R+RRFG
Sbjct: 195 EVEDPQLIIRTSGEERLSGFLLWQSSYSELYFCDSLWPEFRKVDFLRAIRSYQQRERRFG 254
Query: 238 G 238
Sbjct: 255 R 255
>gi|256544689|ref|ZP_05472061.1| di-trans,poly-cis-decaprenylcistransferase [Anaerococcus vaginalis
ATCC 51170]
gi|256399578|gb|EEU13183.1| di-trans,poly-cis-decaprenylcistransferase [Anaerococcus vaginalis
ATCC 51170]
Length = 234
Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats.
Identities = 95/230 (41%), Positives = 147/230 (63%), Gaps = 4/230 (1%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+H+ II+DGNGRWA R LPR GH++G E +I A E GIK LT++AFS NW+RP
Sbjct: 7 NHLAIILDGNGRWAKKRNLPRSMGHKEGSENVVDIALYAKEKGIKYLTLYAFSTENWKRP 66
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E++ L+KL+ F+K L +N +K+ +IG+ L + + + + T+ N L
Sbjct: 67 QVEVNYLMKLLAKFIKDKTKLLMENEVKLNIIGDISKLPEKTIKACLDVCELTKNNDKLV 126
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L +A NY R EI +A K++ +D + +++ I+ YL T+++PDPDL+IRTGG+
Sbjct: 127 LNMAINYGGRMEIVKAFKDMAKD----GIDFENINEEDISNYLYTANMPDPDLLIRTGGD 182
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
R+S+FL++Q+AY+E+ F WPDFS+ A++ Y RDRR+GGL++
Sbjct: 183 LRISNFLIYQMAYTEYYFTDILWPDFSKNDLDVAVDSYFGRDRRYGGLNE 232
>gi|296274438|ref|YP_003657069.1| undecaprenyl diphosphate synthase [Arcobacter nitrofigilis DSM
7299]
gi|296098612|gb|ADG94562.1| undecaprenyl diphosphate synthase [Arcobacter nitrofigilis DSM
7299]
Length = 226
Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats.
Identities = 96/232 (41%), Positives = 140/232 (60%), Gaps = 7/232 (3%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
SS P H+ IIMDGNGRWA +GL R AGH +G + EI A +GIK LT++AFS N
Sbjct: 2 SSLPQHVAIIMDGNGRWAKEQGLNRTAGHEEGAKTVREITTHANNLGIKYLTLYAFSTEN 61
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP E+ L+KL++ +LK +N +K + IG+ + + V+ + +++T+
Sbjct: 62 WSRPKLEVEFLMKLLERYLKNELPIYLENGVKFKAIGDLSKFSNSLQKVISDTQEKTKNA 121
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
GL +A NY SRDEI+RA+K + +V+ I LDT+ +PD D++IR
Sbjct: 122 KGLTQILALNYGSRDEITRAVKKLVDKKL-------EVNQENIESCLDTAGIPDVDMLIR 174
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
T GE R+S++LLWQ AY+E F YWP+FS+ F L+ + R+RRFG +
Sbjct: 175 TSGEIRISNYLLWQCAYAEMFFTKTYWPEFSKNEFDDLLSDFKNRERRFGSV 226
>gi|134296024|ref|YP_001119759.1| undecaprenyl pyrophosphate synthetase [Burkholderia vietnamiensis
G4]
gi|134139181|gb|ABO54924.1| Undecaprenyl pyrophosphate synthetase [Burkholderia vietnamiensis
G4]
Length = 260
Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats.
Identities = 101/235 (42%), Positives = 139/235 (59%), Gaps = 1/235 (0%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+ P HI IIMDGNGRWA R LPR AGH +G++ +V A G++ LT+FAFS N
Sbjct: 14 GAVPRHIAIIMDGNGRWATERRLPRVAGHTRGVDAVRSVVEGCARAGVQYLTLFAFSSEN 73
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+S L++L + L++ L N I++RV+G+ + I +++ AE +T N
Sbjct: 74 WRRPNDEVSFLMRLFITALEREIGKLHANGIRLRVVGDLDRFEPRIRDLIRRAETKTARN 133
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T L L IA NY R +I +A K + DV A +L + P+PDL IR
Sbjct: 134 TRLTLTIAANYGGRWDILQATKKLVAQ-AVREGREVDVTEEAFAPHLAMAYAPEPDLFIR 192
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE+R+S+FLLWQ+AY+EF F +YWPDF A+ Y R+RRFG S +
Sbjct: 193 TGGEQRVSNFLLWQLAYAEFYFTDKYWPDFDGAALADAIASYTERERRFGRTSAQ 247
>gi|52840748|ref|YP_094547.1| undecaprenyl pyrophosphate synthase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|73920265|sp|Q5ZY69|UPPS_LEGPH RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|52627859|gb|AAU26600.1| undecaprenyl diphosphate synthetase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 238
Score = 278 bits (711), Expect = 6e-73, Method: Composition-based stats.
Identities = 90/236 (38%), Positives = 144/236 (61%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M+ P HI ++MDGNGRWA +RGLPR GH+ G++ +I+ E I L++FAFS
Sbjct: 1 MNHKLPQHIAVVMDGNGRWAESRGLPRVEGHKAGLDSVKKIINCCLEKKISCLSLFAFSS 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RPV+E++ L++L L+K L ++ I+++ G+R L + + +AE T+
Sbjct: 61 ENWSRPVTEVNFLMELFLEALRKEIDDLNQHGIRLKFTGDREPLSQILQKQMCDAEALTK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N L L + NY + +I A + + + + G + +++ ++ A++LDT+ +P+PDL
Sbjct: 121 NNQQLILNVVVNYGGKWDIVTAARKLIRTVLDGKLAYDEINEAVFAQFLDTNGMPEPDLF 180
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
IRT GE R+S+F LWQ+AY+E F +WPDF+ F AL + R RRFG +S+
Sbjct: 181 IRTSGELRISNFFLWQLAYTELYFTDVHWPDFNEHEFELALISFAKRARRFGQISQ 236
>gi|329296132|ref|ZP_08253468.1| undecaprenyl diphosphate synthase [Plautia stali symbiont]
Length = 250
Score = 278 bits (711), Expect = 6e-73, Method: Composition-based stats.
Identities = 92/233 (39%), Positives = 144/233 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R +GH+ G++ V+ A ++ LT++AFS NW R
Sbjct: 17 PRHVAIIMDGNGRWAKNQGKLRISGHKAGVKSVRRAVSFAVSNKLEALTLYAFSSENWSR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P+ E++ L++L L SL K+N+++R+IG+ ++ I ++ AE+ T+ N GL
Sbjct: 77 PLQEVTALMELFVWALDSEVKSLHKHNVRLRIIGDISRFNNRIQKRIRRAEELTQQNDGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I + +K + + ++ G + + +A +L ++ DL+IRTGG
Sbjct: 137 TLNIAANYGGRWDIIQGVKKLAEQVQEGLLRPDQITEESLAPHLCMQELAPVDLVIRTGG 196
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
E R+S+FLLWQ+AY+EF F WPDF +F ALN ++LR+RR+GG + G
Sbjct: 197 EHRISNFLLWQIAYAEFWFTDVLWPDFDEHVFEGALNAFSLRERRYGGAAPSG 249
>gi|326441011|ref|ZP_08215745.1| undecaprenyl pyrophosphate synthase [Streptomyces clavuligerus ATCC
27064]
Length = 267
Score = 278 bits (711), Expect = 6e-73, Method: Composition-based stats.
Identities = 85/235 (36%), Positives = 135/235 (57%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P+H+ +MDGNGRWA RGLPR GH++G V +++ E+G++NL+++AF
Sbjct: 23 KIPGELVPNHVACVMDGNGRWAKERGLPRTEGHKRGEAVVLDVLKGCLELGVQNLSLYAF 82
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + ++ + + I++R +G L ++ L+ A++
Sbjct: 83 STENWKRSPDEVRFLMGFNRDVIRARRDEMNEMGIRIRWVGRMPRLWKSVVQELQVAQEM 142
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N + L+ NY R EI+ A + I QD+ +G + V+ KYL D+PD D
Sbjct: 143 TKDNDAMTLYFCVNYGGRAEIADAAQKIAQDVAAGRLDPGKVNERTFQKYLYYPDMPDVD 202
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R GE+R S++L+WQ +Y+E VF WPDF R + A +Y RDRRFGG
Sbjct: 203 LFLRPSGEQRTSNYLIWQSSYAEMVFQDVLWPDFDRRDLWRACLEYAKRDRRFGG 257
>gi|254382924|ref|ZP_04998280.1| undecaprenyl pyrophosphate synthetase 2 [Streptomyces sp. Mg1]
gi|194341825|gb|EDX22791.1| undecaprenyl pyrophosphate synthetase 2 [Streptomyces sp. Mg1]
Length = 273
Score = 278 bits (711), Expect = 6e-73, Method: Composition-based stats.
Identities = 87/235 (37%), Positives = 137/235 (58%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P+H+ ++MDGNGRWA RGLPR GH+ G V +++ E+G+KNL+++AF
Sbjct: 28 KIPGELVPNHVAVVMDGNGRWAKERGLPRTEGHKVGEGVVLDVLKGCLEMGVKNLSLYAF 87
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + +++ + + I++R +G + ++ L+ A++Q
Sbjct: 88 STENWKRSPDEVRFLMNFNRDVIRRRRDEMNELGIRIRWVGRMPKMWKSVVQELQVAQEQ 147
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T N + L+ NY R EI+ A + I +D+ +G + V+ AKY+ D+PD D
Sbjct: 148 TVDNDAMTLYFCVNYGGRAEIADAAQAIARDVAAGRLDPSKVNEKTFAKYMYYPDMPDVD 207
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R GE+R S++LLWQ AY+E VF WPDF R + A +Y RDRRFGG
Sbjct: 208 LFLRPSGEQRTSNYLLWQSAYAEMVFQDVLWPDFDRRNLWQACLEYAQRDRRFGG 262
>gi|58337543|ref|YP_194128.1| undecaprenyl pyrophosphate synthase [Lactobacillus acidophilus
NCFM]
gi|227904184|ref|ZP_04021989.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus
acidophilus ATCC 4796]
gi|73920262|sp|Q5FJM7|UPPS_LACAC RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|58254860|gb|AAV43097.1| undecaprenyl pyrophosphate synthetase [Lactobacillus acidophilus
NCFM]
gi|227868203|gb|EEJ75624.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus
acidophilus ATCC 4796]
Length = 244
Score = 278 bits (711), Expect = 6e-73, Method: Composition-based stats.
Identities = 103/233 (44%), Positives = 149/233 (63%), Gaps = 3/233 (1%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+H+ IIMDGNGRWA R PR GHR+G++ I AA ++GIK LT++AFS NW RP
Sbjct: 9 NHLAIIMDGNGRWAKKRHKPRFVGHREGMDNVERITLAANQLGIKVLTLYAFSTENWARP 68
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E++ L+ L F K +L +NN+KV ++G L + +++ A +T NTGL
Sbjct: 69 KEEVAYLMNLPVRFFDKYMPTLMENNVKVNIMGYLDELPEKTYKIVQRAMSETVNNTGLI 128
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV---PDPDLIIRT 188
L AFNY SR EI+ A+K + IESGS+ S ++ S+I+ +L T + DPDL+IRT
Sbjct: 129 LNFAFNYGSRREITSAVKELGGMIESGSLKSEEITESMISDHLMTGNFGKYRDPDLLIRT 188
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
GE+R+S+FLLWQ+AYSE F + WPDF ++ +++Y R+RRFG + +
Sbjct: 189 SGEQRISNFLLWQLAYSELAFSEKNWPDFDKDDLKEFVDEYKHRNRRFGKVDE 241
>gi|261402846|ref|YP_003247070.1| undecaprenyl diphosphate synthase [Methanocaldococcus vulcanius M7]
gi|261369839|gb|ACX72588.1| undecaprenyl diphosphate synthase [Methanocaldococcus vulcanius M7]
Length = 262
Score = 278 bits (711), Expect = 6e-73, Method: Composition-based stats.
Identities = 87/242 (35%), Positives = 136/242 (56%), Gaps = 4/242 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ S+ ++ P HI IIMDGN R A G + GH G E E++ + ++GIK +T+
Sbjct: 21 LEESIDKNNLPKHIAIIMDGNRRTAEIYGKDKYYGHYLGAEKVREVLRWSRDLGIKVVTL 80
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFS N++R E+++L++L + + K ++VR IG L ++ +K
Sbjct: 81 YAFSTENFKRSEEEVNKLMELFEKKFYEIADDEETHKYEVRVRAIGRINLLPKNVQKAIK 140
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
AE +T + IA Y + EI AIK I + ++ G + D++ LI ++L T++
Sbjct: 141 YAEKKTENYNKFFVNIAIAYGGQQEIIDAIKKIAEKVKRGEIEPEDINKKLIDEHLYTAN 200
Query: 179 V--PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
+ P+PDLIIRT GE+R+S+FL+WQ +YSE F YWP F + F A+ Y R RRF
Sbjct: 201 LPFPNPDLIIRTSGEERISNFLIWQSSYSELYFCDTYWPLFRKIDFLRAVRDYQRRQRRF 260
Query: 237 GG 238
G
Sbjct: 261 GK 262
>gi|170699877|ref|ZP_02890907.1| undecaprenyl diphosphate synthase [Burkholderia ambifaria IOP40-10]
gi|170135199|gb|EDT03497.1| undecaprenyl diphosphate synthase [Burkholderia ambifaria IOP40-10]
Length = 260
Score = 277 bits (710), Expect = 6e-73, Method: Composition-based stats.
Identities = 100/235 (42%), Positives = 139/235 (59%), Gaps = 1/235 (0%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+ P HI IIMDGNGRWA R LPR AGH +G++ +V A G++ LT+FAFS N
Sbjct: 14 GAVPRHIAIIMDGNGRWATERRLPRVAGHTRGVDAVRAVVEGCARAGVEYLTLFAFSSEN 73
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+S L++L + L++ L N I++RV+G+ + I +++ AE +T N
Sbjct: 74 WRRPNDEVSFLMRLFITALEREIGKLHANGIRLRVVGDLERFEPRIRELIRRAETKTARN 133
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T L L IA NY R +I +A + DV A +L + P+PDL IR
Sbjct: 134 TRLTLTIAANYGGRWDILQAT-KKLVEQAVREGREVDVTEDAFAPHLAMAYAPEPDLFIR 192
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE+R+S+FLLWQ+AY+EF F +YWPDF +A+ Y R+RRFG S +
Sbjct: 193 TGGEQRVSNFLLWQLAYAEFYFTDKYWPDFDGAALANAIASYTERERRFGRTSAQ 247
>gi|162147933|ref|YP_001602394.1| undecaprenyl pyrophosphate synthetase [Gluconacetobacter
diazotrophicus PAl 5]
gi|209542551|ref|YP_002274780.1| undecaprenyl diphosphate synthase [Gluconacetobacter diazotrophicus
PAl 5]
gi|161786510|emb|CAP56092.1| putative undecaprenyl pyrophosphate synthetase [Gluconacetobacter
diazotrophicus PAl 5]
gi|209530228|gb|ACI50165.1| undecaprenyl diphosphate synthase [Gluconacetobacter diazotrophicus
PAl 5]
Length = 254
Score = 277 bits (710), Expect = 6e-73, Method: Composition-based stats.
Identities = 103/230 (44%), Positives = 145/230 (63%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P H+ +IMDGNGRWAAARGLPR AGHR G E + AA G+ LT++AFS NW
Sbjct: 21 ALPAHVAVIMDGNGRWAAARGLPRVAGHRAGAEAVRRCIRAAITRGVGCLTLYAFSSENW 80
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RR E+++L L++ +L+ L + +++R+IG+ D D+ + AED T NT
Sbjct: 81 RRTPDEVADLTALLRYYLRHKVAELCREGVRIRIIGDLSRFDADVRDEARRAEDMTAANT 140
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
L L +A +Y R +I +A + SG++ ++D +L +++L T+DVPDPDLI+RT
Sbjct: 141 RLTLVLALSYGGRADIVQAAARVAFAARSGTIDPAELDEALFSRFLLTADVPDPDLIVRT 200
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GE RLS+FLLWQ AY+E VFI WPDF F AL+ + R+RRFG
Sbjct: 201 SGECRLSNFLLWQSAYAELVFIETLWPDFDEHHFDAALDMFARRERRFGA 250
>gi|319897593|ref|YP_004135790.1| undecaprenyl pyrophosphate synthase [Haemophilus influenzae F3031]
gi|317433099|emb|CBY81473.1| undecaprenyl pyrophosphate synthase [Haemophilus influenzae F3031]
Length = 223
Score = 277 bits (710), Expect = 6e-73, Method: Composition-based stats.
Identities = 90/223 (40%), Positives = 130/223 (58%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA + R GH G+ + VA A ++G++ LT++AFS NW RP EIS
Sbjct: 1 MDGNGRWAKQKNKMRIFGHTNGVTAVRKAVAYARQIGVEVLTLYAFSSENWSRPEQEISA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ L L + L KNNI +++IG+ + + +K+AE+ T NT L L IA N
Sbjct: 61 LMSLFMQALDREVKKLHKNNICLKIIGDVSRFSETLQEKIKKAENLTEKNTALTLNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y +I +A K I + ++ + D+++S +L T + P DL+IRT GE+R+S+F
Sbjct: 121 YGGCWDIIQAAKQIAEKVKKEEMSVSDINNSTFQHHLATQNAPPVDLLIRTSGEQRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LLWQ+AY+E F WPDF++ F A+ Y R RRFGG
Sbjct: 181 LLWQIAYAELYFSDVLWPDFNQLEFNRAIASYQQRHRRFGGTE 223
>gi|317046987|ref|YP_004114635.1| undecaprenyl diphosphate synthase [Pantoea sp. At-9b]
gi|316948604|gb|ADU68079.1| undecaprenyl diphosphate synthase [Pantoea sp. At-9b]
Length = 250
Score = 277 bits (710), Expect = 6e-73, Method: Composition-based stats.
Identities = 93/233 (39%), Positives = 143/233 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R +GH+ G++ V+ A ++ LT++AFS NW R
Sbjct: 17 PRHVAIIMDGNGRWAKNQGKLRISGHKAGVKSVRRAVSFAVSHKLEALTLYAFSSENWSR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P+ E++ L++L L SL K+N+++R+IG+ + I ++ AE+ T+ N GL
Sbjct: 77 PIQEVTALMELFVWALDSEVKSLHKHNVRLRIIGDISRFNSRIQERIRRAEELTQQNNGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I + K + + ++ G + + +A YL +++ DL+IRTGG
Sbjct: 137 TLNIAANYGGRWDIIQGAKKLAEQVQEGLLRPDQITEESLAPYLCMNELAPVDLVIRTGG 196
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
E R+S+FLLWQ+AY+EF F WPDF +F ALN ++LR+RR+GG + G
Sbjct: 197 EHRISNFLLWQIAYAEFWFTDVLWPDFDEHVFEGALNAFSLRERRYGGAAPGG 249
>gi|158423321|ref|YP_001524613.1| di-trans-poly-cis-decaprenylcistransferase [Azorhizobium
caulinodans ORS 571]
gi|158330210|dbj|BAF87695.1| di-trans-poly-cis-decaprenylcistransferase [Azorhizobium
caulinodans ORS 571]
Length = 264
Score = 277 bits (710), Expect = 6e-73, Method: Composition-based stats.
Identities = 120/236 (50%), Positives = 160/236 (67%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ P H+GIIMDGNGRWA +R LPR GHR+G+E V +A E+GI+ LTI++FS
Sbjct: 26 PAGVPVHVGIIMDGNGRWATSRKLPRVEGHRRGVEALRRCVRSAREIGIRFLTIYSFSSE 85
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RPVSEISEL+ L++ FL+ L N++VR+IG R SL D+ +L EAE T
Sbjct: 86 NWSRPVSEISELMGLLRRFLRHDLAELHAANVRVRIIGERASLSRDLSAMLDEAEALTAA 145
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTGL L +AFNY SR EI+ A + ++ +G++ ++ + L+ L T+ +PDPDLII
Sbjct: 146 NTGLTLVVAFNYGSRQEIAEAAARLAAEVAAGTLRPEEITADLLGSRLLTAGIPDPDLII 205
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE+RLS+FLLWQ AY+E VF+P YWPDF AL +Y RDRRFGGL+ +
Sbjct: 206 RTSGEQRLSNFLLWQAAYAELVFLPIYWPDFDHAALLGALQEYARRDRRFGGLTAR 261
>gi|301025946|ref|ZP_07189430.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
69-1]
gi|300395745|gb|EFJ79283.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
69-1]
Length = 229
Score = 277 bits (710), Expect = 6e-73, Method: Composition-based stats.
Identities = 86/223 (38%), Positives = 134/223 (60%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA +G R GH+ G + V+ AA GI+ LT++AFS NW RP E+S
Sbjct: 1 MDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPAQEVSA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L L SL ++N+++R+IG+ + + ++++E T NTGL L IA N
Sbjct: 61 LMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTLNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I + ++ + + ++ G + +D ++ +++ ++ DL+IRTGGE R+S+F
Sbjct: 121 YGGRWDIVQGVRQLAEKVQQGKLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGEHRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LLWQ+AY+E F WPDF + F ALN + R+RRFGG
Sbjct: 181 LLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGGTE 223
>gi|242399488|ref|YP_002994913.1| Undecaprenyl pyrophosphate synthetase [Thermococcus sibiricus MM
739]
gi|242265882|gb|ACS90564.1| Undecaprenyl pyrophosphate synthetase [Thermococcus sibiricus MM
739]
Length = 268
Score = 277 bits (710), Expect = 6e-73, Method: Composition-based stats.
Identities = 89/235 (37%), Positives = 134/235 (57%), Gaps = 2/235 (0%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
P HI IIMDGN RWA P GH G + EI+ ++GI+ LT++AFS
Sbjct: 34 RPERIPKHIAIIMDGNRRWARILNKPPWYGHLFGSKKLEEILEWCRDLGIRTLTVYAFST 93
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFY--SLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
N+ R E+ L+ L + K+ + + K I+V V+G + L +++ +EAE
Sbjct: 94 ENFNRSKEEVKMLMDLFEKKFKELIHDRRVHKYGIRVNVLGRKELLPENVRKAAEEAEQA 153
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NL IA Y R EI A+K I DI+ G + +++D L+ +YL ++ DPD
Sbjct: 154 TKKYNNYNLNIAIAYGGRSEIVDAVKRIVDDIQVGKLNKNEIDEKLLKRYLYVPNMTDPD 213
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
++IRTGGE R+S+FL++Q+AYSE F+ Y+P+F + F + +Y RDRRFG
Sbjct: 214 IVIRTGGEVRISNFLIYQIAYSELFFVDVYFPEFRKIDFLRIIREYQKRDRRFGK 268
>gi|302560748|ref|ZP_07313090.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces
griseoflavus Tu4000]
gi|302478366|gb|EFL41459.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces
griseoflavus Tu4000]
Length = 280
Score = 277 bits (710), Expect = 6e-73, Method: Composition-based stats.
Identities = 88/235 (37%), Positives = 138/235 (58%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P+H+ I+MDGNGRWA RGLPR GH+ G E +++ E+G+ ++++AF
Sbjct: 28 KIPGELVPNHVAIVMDGNGRWAKERGLPRTEGHKVGAERVLDVLQGGVEMGVGAISLYAF 87
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + F++K +L + I+VR +G L + L+ A++Q
Sbjct: 88 STENWKRSPDEVRFLMNFNRDFIRKTRDTLDELGIRVRWVGRMPKLWKSVAKELQVAQEQ 147
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N L L+ NY R EI+ A + + +D+++G + V+ + KY+ D+PD D
Sbjct: 148 TKDNDRLTLYFCMNYGGRAEIADAAQALAEDVKAGRLDPGKVNEKTLQKYMYYPDMPDVD 207
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R GE+R S++LLWQ AY+E VF WPDF R + A ++ RDRRFGG
Sbjct: 208 LFLRPSGEQRTSNYLLWQSAYAEMVFQDVLWPDFDRRDLWRACLEFASRDRRFGG 262
>gi|187928371|ref|YP_001898858.1| undecaprenyl diphosphate synthase [Ralstonia pickettii 12J]
gi|187725261|gb|ACD26426.1| undecaprenyl diphosphate synthase [Ralstonia pickettii 12J]
Length = 258
Score = 277 bits (710), Expect = 7e-73, Method: Composition-based stats.
Identities = 99/241 (41%), Positives = 142/241 (58%), Gaps = 2/241 (0%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+A ++ P H+ +IMDGNGRWA R LPR AGH +G++ V AAA G+ LT+F
Sbjct: 7 LAVPDTADTPRHVAVIMDGNGRWATERHLPRVAGHSRGLDAVRATVEAAARRGVGYLTLF 66
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP E++ L+KL + L++ L N I++RV+G+ + I +++EAE
Sbjct: 67 AFSSENWRRPAEEVTFLMKLFMTALRREVSKLHDNGIRLRVVGDLSAFSPRIQLLIREAE 126
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T N GL + I NY R +I +A++ + + + ++A Y+ S P+
Sbjct: 127 AKTAANPGLTVTILANYGGRWDILQAMRALL--TAKPGIAPDAITEEMLAPYMALSYAPE 184
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL IRTGGE+R+S+FLLWQ+AYSE F YWPDF A Y R+RRFG S
Sbjct: 185 PDLFIRTGGEQRISNFLLWQLAYSELYFTDRYWPDFDAAELDRAFAWYRNRERRFGRTSA 244
Query: 242 K 242
+
Sbjct: 245 Q 245
>gi|119505670|ref|ZP_01627740.1| undecaprenyl diphosphate synthase [marine gamma proteobacterium
HTCC2080]
gi|119458482|gb|EAW39587.1| undecaprenyl diphosphate synthase [marine gamma proteobacterium
HTCC2080]
Length = 260
Score = 277 bits (710), Expect = 7e-73, Method: Composition-based stats.
Identities = 88/227 (38%), Positives = 141/227 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI IIMDGNGRWA+ RGLP AGHR G+E + + GI+ LT+FAFS NW R
Sbjct: 16 PRHIAIIMDGNGRWASRRGLPVPAGHRAGVEAVRSALKGCKDKGIEVLTLFAFSSENWGR 75
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L+ L+ +L++ L+++++++R IG R L + ++ +E+ T NTG
Sbjct: 76 PETEVRALMALLCHYLRREVEQLQRDSVRLRFIGRRDRLSLRLQRLMIRSEEATAANTGA 135
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A +Y + ++ A++ + ++ +G++ + +++S + L D+P PDL IRTGG
Sbjct: 136 TLVLAVDYGGQWDVIDAVRKLASEVAAGTLSADEINSDRFEQTLSLGDLPPPDLCIRTGG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+ R+S+F+LWQ+AY+EF F WPDF A+ + R+RRFG
Sbjct: 196 DARISNFMLWQLAYTEFYFCEALWPDFDEAALTRAIEDFQSRERRFG 242
>gi|264679363|ref|YP_003279270.1| undecaprenyl diphosphate synthase [Comamonas testosteroni CNB-2]
gi|262209876|gb|ACY33974.1| undecaprenyl diphosphate synthase [Comamonas testosteroni CNB-2]
Length = 245
Score = 277 bits (710), Expect = 7e-73, Method: Composition-based stats.
Identities = 94/241 (39%), Positives = 137/241 (56%), Gaps = 7/241 (2%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ S + + P HI +IMDGNGRWA R LPR AGH++G+E A E G++ LT+F
Sbjct: 1 MTSKKNGAVPRHIAVIMDGNGRWAKRRLLPRLAGHKQGVESLRRCARACVERGVQVLTVF 60
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+S L+ L+ + L K L ++ +++ +G+R L D + L EAE
Sbjct: 61 AFSSENWNRPQEEVSGLMSLLANALAKEVAQLSRDGVRLYFVGDRQGLSDKVREGLAEAE 120
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T NT L L + FNY R +I++A + + ++ + + + + VPD
Sbjct: 121 RITAHNTRLVLNVCFNYGGRWDIAQAAQKLVAQGL-------ELTPENLDRAMALAHVPD 173
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL+IRTGGE R+S+FLLWQ AY+E F WP F A+ + R+RRFG S+
Sbjct: 174 PDLMIRTGGETRISNFLLWQAAYTELFFSNALWPGFDEAALDEAIAVFGGRERRFGQTSE 233
Query: 242 K 242
+
Sbjct: 234 Q 234
>gi|327488786|gb|EGF20585.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus sanguinis
SK1058]
Length = 226
Score = 277 bits (710), Expect = 7e-73, Method: Composition-based stats.
Identities = 100/226 (44%), Positives = 137/226 (60%), Gaps = 4/226 (1%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA R PR GH+ G+E + AA E+G++ LT++AFS NW RP E+S
Sbjct: 1 MDGNGRWAKKRMQPRVFGHKAGMETLQRVTIAAKEMGVQVLTVYAFSTENWSRPEKEVSF 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
++ L F + L KN +K+++IG+ L L++AE T+LNTGL L A N
Sbjct: 61 IMNLPVEFYDRYVPELHKNKVKIQMIGDTAKLPKATFEALEKAESLTKLNTGLILNFALN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLIIRTGGEKR 193
Y R EI++A+K I QD+ + D+ +I YL TS++P DPDL+IRT GE R
Sbjct: 121 YGGRYEINQAVKLIAQDVLDAKLSPGDITEEVIGNYLYTSNLPKMLRDPDLVIRTSGELR 180
Query: 194 LSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
LS+FL WQ AYSE F WPDF + A+ +Y+ R+RRFGG+
Sbjct: 181 LSNFLPWQSAYSELYFTDILWPDFDEKALKAAIAEYSRRNRRFGGV 226
>gi|238852612|ref|ZP_04643022.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus gasseri
202-4]
gi|238834758|gb|EEQ26985.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus gasseri
202-4]
Length = 239
Score = 277 bits (709), Expect = 8e-73, Method: Composition-based stats.
Identities = 100/231 (43%), Positives = 144/231 (62%), Gaps = 3/231 (1%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+H+ IIMDGNGRWA R LPR GHR G++ I AA E+GIK LT++AFS NW RP
Sbjct: 9 NHLAIIMDGNGRWAKKRHLPRFVGHRHGMDNIRNIALAANEMGIKVLTLYAFSTENWARP 68
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E++ L++L F K L +NN++V ++G L + V ++A +T NTG+
Sbjct: 69 TDEVNYLMRLPIDFFDKFMPELMENNVRVNIMGFLDELPEKTYLVTQKAMAETANNTGMV 128
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP---DPDLIIRT 188
L AFNY SR EI+ ++ I + ++ G + D+D +++ +L T + DPDL+IRT
Sbjct: 129 LNFAFNYGSRREITAGVQEIARQVKIGKINPSDIDEKMVSDHLLTHSLTPYDDPDLLIRT 188
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE+RLS+FLLWQ+AY+EF F + WPDF + + + Y R+RRFG L
Sbjct: 189 SGEERLSNFLLWQMAYTEFSFSNKLWPDFDKNDLENLVKDYYGRNRRFGKL 239
>gi|309782133|ref|ZP_07676863.1| di-trans,poly-cis-decaprenylcistransferase [Ralstonia sp.
5_7_47FAA]
gi|308919199|gb|EFP64866.1| di-trans,poly-cis-decaprenylcistransferase [Ralstonia sp.
5_7_47FAA]
Length = 258
Score = 277 bits (709), Expect = 8e-73, Method: Composition-based stats.
Identities = 99/241 (41%), Positives = 142/241 (58%), Gaps = 2/241 (0%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+A ++ P H+ +IMDGNGRWA R LPR AGH +G++ V AAA G+ LT+F
Sbjct: 7 LAVPDTADTPRHVAVIMDGNGRWATERHLPRVAGHSRGLDAVRATVEAAARRGVGYLTLF 66
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP E++ L+KL + L++ L N I++RV+G+ + I +++EAE
Sbjct: 67 AFSSENWRRPAEEVTFLMKLFMTALRREVSKLHDNGIRLRVVGDLSAFSPRIQLLIREAE 126
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T N GL + I NY R +I +A++ + + + ++A Y+ S P+
Sbjct: 127 AKTAANPGLTVTILANYGGRWDILQAMRALL--AAQPGIAPDAITEEMLAPYMALSYAPE 184
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL IRTGGE+R+S+FLLWQ+AYSE F YWPDF A Y R+RRFG S
Sbjct: 185 PDLFIRTGGEQRISNFLLWQLAYSELYFTDRYWPDFDAAELDRAFAWYRNRERRFGRTSA 244
Query: 242 K 242
+
Sbjct: 245 Q 245
>gi|241662947|ref|YP_002981307.1| undecaprenyl diphosphate synthase [Ralstonia pickettii 12D]
gi|240864974|gb|ACS62635.1| undecaprenyl diphosphate synthase [Ralstonia pickettii 12D]
Length = 258
Score = 277 bits (709), Expect = 8e-73, Method: Composition-based stats.
Identities = 99/241 (41%), Positives = 142/241 (58%), Gaps = 2/241 (0%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+A ++ P H+ +IMDGNGRWA R LPR AGH +G++ V AAA G+ LT+F
Sbjct: 7 LAVPDTADTPRHVAVIMDGNGRWATERHLPRVAGHSRGLDAVRATVEAAARRGVGYLTLF 66
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP E++ L+KL + L++ L N I++RV+G+ + I +++EAE
Sbjct: 67 AFSSENWRRPAEEVTFLMKLFMTALRREVSKLHDNGIRLRVVGDLSAFSPRIQLLIREAE 126
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T N GL + I NY R +I +A++ + + + ++A Y+ S P+
Sbjct: 127 AKTAANPGLTVTILANYGGRWDILQAMRALL--AAQPGIAPDAITEEMLAPYMALSYAPE 184
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL IRTGGE+R+S+FLLWQ+AYSE F YWPDF A Y R+RRFG S
Sbjct: 185 PDLFIRTGGEQRISNFLLWQLAYSELYFTDRYWPDFDAAELDRAFAWYRNRERRFGRTSA 244
Query: 242 K 242
+
Sbjct: 245 Q 245
>gi|161524434|ref|YP_001579446.1| undecaprenyl diphosphate synthase [Burkholderia multivorans ATCC
17616]
gi|189350811|ref|YP_001946439.1| undecaprenyl pyrophosphate synthetase [Burkholderia multivorans
ATCC 17616]
gi|160341863|gb|ABX14949.1| undecaprenyl diphosphate synthase [Burkholderia multivorans ATCC
17616]
gi|189334833|dbj|BAG43903.1| undecaprenyl pyrophosphate synthetase [Burkholderia multivorans
ATCC 17616]
Length = 260
Score = 277 bits (709), Expect = 8e-73, Method: Composition-based stats.
Identities = 101/233 (43%), Positives = 138/233 (59%), Gaps = 1/233 (0%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI IIMDGNGRWA R LPR AGH +G++ +V A G++ LT+FAFS NWR
Sbjct: 16 VPRHIAIIMDGNGRWATERRLPRVAGHTRGVDAVRAVVEGCARAGVEYLTLFAFSSENWR 75
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+S L++L + L++ L N I++RV+G+ + I +++ AE +T NT
Sbjct: 76 RPSDEVSFLMRLFITALEREIGKLHANGIRLRVVGDLERFEPRIRELIRRAETKTARNTR 135
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L IA NY R +I +A K + + V A +L + P+PDL IRTG
Sbjct: 136 LTLTIAANYGGRWDILQATKKLVEQAAREGREVE-VTEESFAPHLAMAYAPEPDLFIRTG 194
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+R+S+FLLWQ+AY+EF F +YWPDF AL Y R+RRFG S +
Sbjct: 195 GEQRVSNFLLWQLAYAEFYFTNKYWPDFDGAALAEALASYTERERRFGRTSAQ 247
>gi|296115045|ref|ZP_06833687.1| undecaprenyl pyrophosphate synthetase [Gluconacetobacter hansenii
ATCC 23769]
gi|295978382|gb|EFG85118.1| undecaprenyl pyrophosphate synthetase [Gluconacetobacter hansenii
ATCC 23769]
Length = 244
Score = 277 bits (709), Expect = 8e-73, Method: Composition-based stats.
Identities = 95/233 (40%), Positives = 141/233 (60%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ S P H+ IIMDGNGRWAA+RGLP AGHR G E + AA G+K LT++AFS
Sbjct: 9 RAGSVPVHVAIIMDGNGRWAASRGLPLLAGHRAGAEAVQRCIRAAVASGVKWLTLYAFSS 68
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NWRR E+++L L++ +L+ L +++R+IG+ D+ + AE +T
Sbjct: 69 ENWRRTPQEVADLTSLLRYYLRYKVAELAAKGVRIRIIGDLSRFAPDVRAEARRAELETA 128
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
NT L + +A +Y R +I +A + + ++ G++ +D + +L T+D+PDPD++
Sbjct: 129 SNTVLTVVLALSYGGRADIMQAALRMAKAVQDGTLAPGQIDEDVFGGFLMTADMPDPDIV 188
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+RT GE RLS+FLLWQ AY+E +FI WPDF F L Y+ R+RRFG
Sbjct: 189 VRTSGESRLSNFLLWQSAYAELIFIETLWPDFDAGHFDAVLQIYSRRERRFGA 241
>gi|114569934|ref|YP_756614.1| undecaprenyl pyrophosphate synthetase [Maricaulis maris MCS10]
gi|114340396|gb|ABI65676.1| Undecaprenyl pyrophosphate synthetase [Maricaulis maris MCS10]
Length = 245
Score = 277 bits (709), Expect = 9e-73, Method: Composition-based stats.
Identities = 103/229 (44%), Positives = 153/229 (66%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H IIMDGNGRWA ARG PR GH++G+E +IV A E+G++ LT+F+FS NW R
Sbjct: 12 PRHTAIIMDGNGRWAKARGRPRSFGHKRGVETVRKIVEHAGELGVRYLTLFSFSTENWSR 71
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L +L+K +++ L + +++R+IG R +L D++ ++ AE +TR NT
Sbjct: 72 PADEVGALFELLKHYVEADLEGLARRGVRIRIIGRRDNLGADLIAIIDRAEARTRDNTDF 131
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L IAFNY RDEI RA + + ++ SG++ +D + + +LDT +PD DL+IRT G
Sbjct: 132 HLTIAFNYGGRDEILRACQAVAKEAASGALDVSTLDEARLGGFLDTEGLPDVDLMIRTSG 191
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+R+S+FLLWQ AY+E VF+ WPDF+ + A+N Y+ R RR+GG+
Sbjct: 192 EQRISNFLLWQAAYAELVFVEALWPDFTTDDLASAINTYHQRVRRYGGV 240
>gi|226945937|ref|YP_002801010.1| undecaprenyl diphosphate synthase [Azotobacter vinelandii DJ]
gi|226720864|gb|ACO80035.1| undecaprenyl diphosphate synthase [Azotobacter vinelandii DJ]
Length = 251
Score = 277 bits (709), Expect = 9e-73, Method: Composition-based stats.
Identities = 96/233 (41%), Positives = 147/233 (63%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IIMDGN RWA R LP AGH+ G++ + EVG++ LT+FAFS NW+
Sbjct: 12 VPRHVAIIMDGNNRWAKKRLLPGIAGHKAGVDAVRATIEVCVEVGVEVLTLFAFSSENWQ 71
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP +E+S L++L + L++ L +N I +R+IG+R ++ ++EAE QT TG
Sbjct: 72 RPATEVSALMELFLTALRREARRLCENGICLRIIGDRSRFSPELQDAMREAELQTAGQTG 131
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L +A NY + +I++A + + +++++G + D+ L+ L T D P PDL IRTG
Sbjct: 132 LLLQVAANYGGQWDIAQAAQRLAREVQAGQLQLDDITPQLLQSCLSTGDQPPPDLCIRTG 191
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
G++R+S+FLLWQ+AY+E F +YWPDF ++ AL + R RRFG S++
Sbjct: 192 GDRRISNFLLWQLAYAELYFTDQYWPDFRQDAMRRALVDFASRQRRFGKTSEQ 244
>gi|294101872|ref|YP_003553730.1| undecaprenyl diphosphate synthase [Aminobacterium colombiense DSM
12261]
gi|293616852|gb|ADE57006.1| undecaprenyl diphosphate synthase [Aminobacterium colombiense DSM
12261]
Length = 228
Score = 277 bits (709), Expect = 9e-73, Method: Composition-based stats.
Identities = 99/230 (43%), Positives = 135/230 (58%), Gaps = 5/230 (2%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
HI IIMDGNGRWA R LPR GHR G++ V AAA+ GI L+++AFS NW+RP
Sbjct: 4 KHIAIIMDGNGRWAKKRHLPRLLGHRAGVKAVERTVRAAADFGIPYLSLYAFSTENWKRP 63
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
+E+ L+ L + ++ K L K ++++R G L DI ++ EAE++T L
Sbjct: 64 KTEVKGLMSLFRYYINKKVQELVKEDVRLRFAGRTKELPKDIQEIIHEAENETEKGQRLQ 123
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L + NY R EI A++ + +D G V I YL D+PDPDLIIRT GE
Sbjct: 124 LIVCLNYGGRQEIVDAVQKLLKDGYKGK-----VTEETIRSYLYLPDLPDPDLIIRTSGE 178
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
RLS+F LW+ +YSEF F WPDF++E A+ Y RDRR+GG+ +
Sbjct: 179 YRLSNFWLWEGSYSEFYFSSLLWPDFNKEALQEAILSYEKRDRRYGGIQR 228
>gi|42525111|ref|NP_970491.1| undecaprenyl pyrophosphate synthetase [Bdellovibrio bacteriovorus
HD100]
gi|39577322|emb|CAE81145.1| undecaprenyl pyrophosphate synthetase [Bdellovibrio bacteriovorus
HD100]
Length = 244
Score = 277 bits (709), Expect = 9e-73, Method: Composition-based stats.
Identities = 104/232 (44%), Positives = 146/232 (62%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HI IIMDGNGRWA + PR GH KG V +I+ A + GIKNLT++AFS NW
Sbjct: 2 GMPKHIAIIMDGNGRWAQLKRRPRTFGHIKGTRVAKKIITACSRRGIKNLTLYAFSTENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+S L+ ++ +LK+ +L K NI+ VIG+ L D+ ++++ + T T
Sbjct: 62 FRPQEEVSLLMLILSRYLKRETENLVKENIRFSVIGDLSRLPLDVANAIEKSIEATSQCT 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GLNL A +Y SR EI++A+++I + + +G + ++D S+I L T PDPDLIIRT
Sbjct: 122 GLNLVFALSYGSRQEITQAVRDIAEKVAAGEISPAEIDESVINSALSTFPTPDPDLIIRT 181
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
GE+RLS+FLLWQ AYSEF F WP+F+ AL + +R RR+G +S
Sbjct: 182 SGEQRLSNFLLWQAAYSEFYFTEVLWPNFTESHLDEALQAFAMRQRRYGKVS 233
>gi|300824103|ref|ZP_07104223.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
119-7]
gi|300900788|ref|ZP_07118932.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
198-1]
gi|300920144|ref|ZP_07136595.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
115-1]
gi|300923034|ref|ZP_07139101.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
182-1]
gi|300949794|ref|ZP_07163768.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
116-1]
gi|300984934|ref|ZP_07177199.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
200-1]
gi|300993605|ref|ZP_07180461.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
45-1]
gi|301049913|ref|ZP_07196838.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
185-1]
gi|301330028|ref|ZP_07222712.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
78-1]
gi|312966310|ref|ZP_07780536.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
2362-75]
gi|300298342|gb|EFJ54727.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
185-1]
gi|300306584|gb|EFJ61104.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
200-1]
gi|300355737|gb|EFJ71607.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
198-1]
gi|300406528|gb|EFJ90066.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
45-1]
gi|300412841|gb|EFJ96151.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
115-1]
gi|300420661|gb|EFK03972.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
182-1]
gi|300450826|gb|EFK14446.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
116-1]
gi|300523380|gb|EFK44449.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
119-7]
gi|300843939|gb|EFK71699.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
78-1]
gi|312289553|gb|EFR17447.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
2362-75]
gi|313646766|gb|EFS11225.1| di-trans,poly-cis-decaprenylcistransferase [Shigella flexneri 2a
str. 2457T]
gi|315285259|gb|EFU44704.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
110-3]
gi|315294578|gb|EFU53925.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
153-1]
gi|315300678|gb|EFU59905.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
16-3]
gi|324008236|gb|EGB77455.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
57-2]
gi|324014108|gb|EGB83327.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli MS
60-1]
gi|325496106|gb|EGC93965.1| undecaprenyl pyrophosphate synthase [Escherichia fergusonii ECD227]
gi|327255153|gb|EGE66756.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli
STEC_7v]
gi|332097603|gb|EGJ02580.1| di-trans,poly-cis-decaprenylcistransferase [Shigella dysenteriae
155-74]
Length = 229
Score = 277 bits (709), Expect = 9e-73, Method: Composition-based stats.
Identities = 86/223 (38%), Positives = 135/223 (60%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA +G R GH+ G + V+ AA GI+ LT++AFS NW RP E+S
Sbjct: 1 MDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPAQEVSA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L L SL ++N+++R+IG+ + + ++++E T NTGL L IA N
Sbjct: 61 LMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTLNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I + ++ + + ++ G++ +D ++ +++ ++ DL+IRTGGE R+S+F
Sbjct: 121 YGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGEHRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LLWQ+AY+E F WPDF + F ALN + R+RRFGG
Sbjct: 181 LLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGGTE 223
>gi|89054948|ref|YP_510399.1| undecaprenyl pyrophosphate synthetase [Jannaschia sp. CCS1]
gi|88864497|gb|ABD55374.1| Undecaprenyl pyrophosphate synthetase [Jannaschia sp. CCS1]
Length = 241
Score = 277 bits (709), Expect = 9e-73, Method: Composition-based stats.
Identities = 106/241 (43%), Positives = 149/241 (61%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M +S+ P H+ IIMDGNGRWA R PR GH G + EIV AA + G+K LTI
Sbjct: 1 MPTQSETSNAPKHVAIIMDGNGRWAQMRHRPRLVGHHAGAKRVREIVRAAPDHGVKYLTI 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW+R +E++ L+KL K ++++ +L + VR IG+R+ L+ ++ ++
Sbjct: 61 FAFSTENWKRTQTEVAGLMKLFKRYIRREAQNLLDEGVCVRFIGDRVRLEPALVDLMDGL 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E T N ++L IA NY RDE++RA K + D+ G + DV KYLDT +P
Sbjct: 121 ELLTADNDKVHLTIALNYGGRDEVARAAKRMAYDVSMGKLNPRDVCDETFPKYLDTHVLP 180
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GE R+S+FLLWQ AY+E+ FI WPDF+ ++F L ++ RDRRFG +
Sbjct: 181 DPDLVIRTSGEARISNFLLWQSAYAEYEFIDTLWPDFTADVFASVLGRFGARDRRFGAVK 240
Query: 241 K 241
Sbjct: 241 A 241
>gi|29832172|ref|NP_826806.1| undecaprenyl diphosphate synthase [Streptomyces avermitilis
MA-4680]
gi|42559953|sp|Q82BS5|UPPS2_STRAW RecName: Full=Undecaprenyl pyrophosphate synthase 2; Short=UPP
synthase 2; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase 2;
AltName: Full=Undecaprenyl diphosphate synthase 2;
Short=UDS 2
gi|29609290|dbj|BAC73341.1| putative undecaprenyl diphosphate synthase [Streptomyces
avermitilis MA-4680]
Length = 285
Score = 277 bits (709), Expect = 9e-73, Method: Composition-based stats.
Identities = 87/235 (37%), Positives = 135/235 (57%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P+H+ +MDGNGRWA RGLPR GH+ G V +++ E+G+KNL+++AF
Sbjct: 28 KLPGELIPNHVACVMDGNGRWAKERGLPRTEGHKVGEGVVMDVLKGCIELGVKNLSLYAF 87
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + +++ + I++R +G L ++ L+ A++Q
Sbjct: 88 STENWKRSPEEVRFLMNFNRDVIRRRRDEMDALGIRIRWVGRMPKLWKSVVQELQIAQEQ 147
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N + L+ NY R E++ A K + +D+ +G + V I KYL D+PD D
Sbjct: 148 TKDNDAMTLYFCVNYGGRAELADAAKAMAEDVAAGRLDPAKVSEKTIQKYLYYPDMPDVD 207
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R GE+R S++LLWQ +Y+E VF WPDF R + A +Y RDRRFGG
Sbjct: 208 LFLRPSGEQRTSNYLLWQSSYAEMVFQDVLWPDFDRRDLWRACVEYASRDRRFGG 262
>gi|21220970|ref|NP_626749.1| undecaprenyl phosphate synthetase [Streptomyces coelicolor A3(2)]
gi|256787869|ref|ZP_05526300.1| undecaprenyl phosphate synthetase [Streptomyces lividans TK24]
gi|289771753|ref|ZP_06531131.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces lividans
TK24]
gi|42560016|sp|Q9L2H4|UPPS1_STRCO RecName: Full=Undecaprenyl pyrophosphate synthase 1; Short=UPP
synthase 1; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase 1;
AltName: Full=Undecaprenyl diphosphate synthase 1;
Short=UDS 1
gi|6752352|emb|CAB69730.1| undecaprenyl phosphate synthetase [Streptomyces coelicolor A3(2)]
gi|289701952|gb|EFD69381.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces lividans
TK24]
Length = 277
Score = 277 bits (709), Expect = 9e-73, Method: Composition-based stats.
Identities = 91/229 (39%), Positives = 138/229 (60%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P+H+ I+MDGNGRWA RGLPR GH+ G E +++ A E+G+ N++++AFS NW+
Sbjct: 33 VPEHVAIVMDGNGRWAKERGLPRTEGHKVGAEQVMDVLQGAIEMGVGNISLYAFSTENWK 92
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ L+ + F++K +L + ++VR G L + L+ A++QT+ N
Sbjct: 93 RSPEEVRFLMNFNRDFIRKSRDTLDELGVRVRWAGRMPRLWKSVAKELQVAQEQTKDNDR 152
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L+ NY R EI+ A + + +D+ +G + V+ +AKYL D+PD DL +R
Sbjct: 153 LTLYFCMNYGGRAEIADAAQALAEDVRAGKLDPAKVNEKTLAKYLYYPDMPDVDLFLRPS 212
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GE+R S++LLWQ AY+E VF WPDF R + A ++ RDRRFGG
Sbjct: 213 GEQRTSNYLLWQSAYAEMVFQDVLWPDFDRRDLWRACLEFASRDRRFGG 261
>gi|87310539|ref|ZP_01092668.1| undecaprenyl pyrophosphate synthetase [Blastopirellula marina DSM
3645]
gi|87286760|gb|EAQ78665.1| undecaprenyl pyrophosphate synthetase [Blastopirellula marina DSM
3645]
Length = 259
Score = 277 bits (709), Expect = 9e-73, Method: Composition-based stats.
Identities = 88/236 (37%), Positives = 138/236 (58%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI +IMDGNGRWA +GLPR GHR+G+ A +GI+ LT++ S
Sbjct: 16 VAAERLPRHIAVIMDGNGRWAQRQGLPRVEGHRRGVTSVRRTTEECARLGIQQLTLYCLS 75
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+ L+ L++ ++ + ++ NNI+VR+IG R + + + + + +
Sbjct: 76 SENWKRPQYELDFLMHLLEQYMIEERSTIMANNIQVRIIGRRDGIPEQVQHEMDRTIELS 135
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NTG L +A NY R E+ A++ + +G++ + IA +L T+ +PDPDL
Sbjct: 136 AANTGTTLCLAINYGGRGEMVDAVRKMATAAAAGTLEPAKITEDAIAAHLYTAGMPDPDL 195
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
+IRT GE R+S+FLLWQ++Y+E + WP+F E A+ + RDRRFGGL
Sbjct: 196 LIRTAGEMRISNFLLWQISYAELWVTQQCWPEFCEETLHQAIRDFAGRDRRFGGLK 251
>gi|313885283|ref|ZP_07819034.1| di-trans,poly-cis-decaprenylcistransferase [Eremococcus coleocola
ACS-139-V-Col8]
gi|312619389|gb|EFR30827.1| di-trans,poly-cis-decaprenylcistransferase [Eremococcus coleocola
ACS-139-V-Col8]
Length = 241
Score = 277 bits (709), Expect = 9e-73, Method: Composition-based stats.
Identities = 100/234 (42%), Positives = 146/234 (62%), Gaps = 3/234 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P+H+ IIMDGNGRWA R LPR AGH +G + ++ A ++GIK L+++AFS NW
Sbjct: 7 AIPNHVAIIMDGNGRWAKKRLLPRVAGHHQGAQTIKKVAKRANQLGIKVLSLYAFSTENW 66
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+ L+ L K F K L + +K+ V+G+ +L +++ A DQT+ NT
Sbjct: 67 GRPEKEVKFLMDLPKEFFKTYLPELMEEGVKLEVMGDLSTLPSATREIIETALDQTKHNT 126
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV---PDPDLI 185
GL L NY R EI++A++ I Q+I++G + + VD + I ++L ++ + PDL+
Sbjct: 127 GLILNFLINYGGRQEITKAMQAIGQEIQAGRIQADQVDETYIEQHLMSAKLGAYAQPDLM 186
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRT GE+RLS+FLLWQVAYSEF F WPDF E A+ +Y R RR+G +
Sbjct: 187 IRTSGEERLSNFLLWQVAYSEFYFTNTLWPDFDAEALDLAIQEYGQRQRRYGKV 240
>gi|332970848|gb|EGK09827.1| undecaprenyl diphosphate synthase [Psychrobacter sp. 1501(2011)]
Length = 256
Score = 277 bits (709), Expect = 9e-73, Method: Composition-based stats.
Identities = 86/237 (36%), Positives = 141/237 (59%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ + P HI IIMDGN R+A A G+ + GH G E + +V VGI+ LT+FAFS
Sbjct: 15 VPAVLPKHIAIIMDGNNRYAKAHGMAKGQGHVAGKESLDPLVEYCVAVGIEVLTVFAFSS 74
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP E++ L++L+ + + + ++K NI++R IG+R L ++ + +AE T
Sbjct: 75 ENWQRPADEVALLMRLLSATINEQLPRMRKYNIRLRFIGDRSQLSPELQQQMADAEADTA 134
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
T + L IA +Y + +I+ A + + + IE G + + + + + + +DV D D++
Sbjct: 135 GFTAMTLVIAISYGGQWDIANAARQLAKKIEQGEMTAEQLTVETLGQQVQLADVADVDML 194
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTGGE R+S+FLLWQ AY+E F WPDF+ + + +++ R RRFG S++
Sbjct: 195 IRTGGEYRISNFLLWQSAYAELFFTDTLWPDFAAKELNEMMFEFSRRQRRFGKTSEQ 251
>gi|299144040|ref|ZP_07037120.1| di-trans,poly-cis-decaprenylcistransferase [Peptoniphilus sp. oral
taxon 386 str. F0131]
gi|298518525|gb|EFI42264.1| di-trans,poly-cis-decaprenylcistransferase [Peptoniphilus sp. oral
taxon 386 str. F0131]
Length = 250
Score = 277 bits (709), Expect = 9e-73, Method: Composition-based stats.
Identities = 98/239 (41%), Positives = 146/239 (61%), Gaps = 1/239 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ ++ P+HIGIIMDGNGRWA + LPR GH++G + EIV A +GIK+L++
Sbjct: 13 LKDNIKLDLIPNHIGIIMDGNGRWAKNKNLPRYFGHKEGSKRVIEIVEACYNLGIKSLSL 72
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP EIS+L+ L+ F+K + +NN+K+ V+G+ L + + A
Sbjct: 73 YAFSTENWKRPEEEISKLMDLLVIFIKSQLDKIMENNVKINVLGDISKLPLKVQKEINRA 132
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
T N + L I NY RDEI A K I +D+ + + +D+ +L + YL T
Sbjct: 133 LSLTEHNDKMILNIGLNYGGRDEIIMATKAICEDVLNKKIAINDI-ETLFSNYLYTKGQN 191
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+ DL+IR GE R+S+F+L+Q+AY+EF F WPDF+ E+ + A+ Y R+RRFGGL
Sbjct: 192 ELDLLIRPSGELRVSNFMLYQLAYAEFWFSNILWPDFTEEVLYEAIIDYQNRNRRFGGL 250
>gi|325847017|ref|ZP_08169843.1| di-trans,poly-cis-decaprenylcistransferase [Anaerococcus
hydrogenalis ACS-025-V-Sch4]
gi|325480989|gb|EGC84034.1| di-trans,poly-cis-decaprenylcistransferase [Anaerococcus
hydrogenalis ACS-025-V-Sch4]
Length = 234
Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats.
Identities = 93/230 (40%), Positives = 146/230 (63%), Gaps = 4/230 (1%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+H+ II+DGNGRWA + +PR GH++G E +I A E GIK LT++AFS NW+RP
Sbjct: 7 NHLAIILDGNGRWAKNKNMPRSMGHKEGSENVVDIALYAKEKGIKYLTLYAFSTENWKRP 66
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E++ L+KL+ F+K L +N +K+ +IG+ L + + + + T+ N L
Sbjct: 67 KIEVNYLMKLLAKFIKDKTKLLMENEVKLNIIGDISKLPEKTMRACLDVCELTKNNDQLV 126
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L +A NY R EI +A K++ +D + +D I+ YL T ++PDPDL+IRTGG+
Sbjct: 127 LNMAINYGGRSEIVKAFKDMAKD----GIDFEKIDEDDISNYLYTKNMPDPDLLIRTGGD 182
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
R+S+FL++Q+AY+E+ F WPDFS++ A++ + RDRR+GGL++
Sbjct: 183 LRISNFLIYQMAYTEYYFTDVLWPDFSKKDLDKAVDSFYGRDRRYGGLNE 232
>gi|256830147|ref|YP_003158875.1| undecaprenyl diphosphate synthase [Desulfomicrobium baculatum DSM
4028]
gi|256579323|gb|ACU90459.1| undecaprenyl diphosphate synthase [Desulfomicrobium baculatum DSM
4028]
Length = 233
Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats.
Identities = 97/235 (41%), Positives = 134/235 (57%), Gaps = 5/235 (2%)
Query: 10 PP-DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
PP +H+ IIMDGNGRWA ARGL R GH+ G E EIV ++GI LT++ FS NW
Sbjct: 2 PPINHLAIIMDGNGRWARARGLDRSDGHKAGTETAREIVKECRKLGIPYLTLYTFSKENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+ L L+K FL + SL + +I++ V+G+ L VL+ ++T +
Sbjct: 62 SRPKQEVGFLFGLLKDFLTEELPSLLEQSIRLNVLGDLDELPLPTRQVLRHVMEKTAGCS 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+ L +A NYS R EI RA + + + V ++ + A L T+ +PDPDLI+RT
Sbjct: 122 AMTLNLALNYSGRLEILRACQALLKKQ----VKPSELTGEMFADELYTAGMPDPDLILRT 177
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
GE RLS++LL+Q AYSE F WPDF AL +Y R RRFG ++
Sbjct: 178 SGELRLSNYLLFQSAYSELYFTDVAWPDFHAPQLEAALAEYASRQRRFGTTGEES 232
>gi|160947397|ref|ZP_02094564.1| hypothetical protein PEPMIC_01331 [Parvimonas micra ATCC 33270]
gi|158446531|gb|EDP23526.1| hypothetical protein PEPMIC_01331 [Parvimonas micra ATCC 33270]
Length = 238
Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats.
Identities = 95/238 (39%), Positives = 149/238 (62%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + + P HIGIIMDGNGRWA R LPR AGH++G+ +IV ++G++ LT++
Sbjct: 1 MKDIDLKNVPKHIGIIMDGNGRWAKNRFLPRIAGHKEGMNRVVDIVEECCKIGVRTLTLY 60
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E++ L+ ++ ++ + +NNI RVIG+ L D I+ +L+++
Sbjct: 61 AFSTENWKRPEEEVNGLMNILVIYINSQLKRILENNIVFRVIGDYSKLPDSIVKLLEDSI 120
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++++ N G+ L IA NY R EI +IK ++ DI +++ KYL T + D
Sbjct: 121 NKSKNNNGMVLNIALNYGGRAEIIASIKKLYDDILKEKFSIDNLNEESFKKYLYTKENSD 180
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DL+IRTG EKR+S+FL++Q+AYSEF F WP+F + + A+ + R+RRFGG+
Sbjct: 181 VDLMIRTGNEKRISNFLIYQLAYSEFYFTDILWPEFYADDLYDAIYDFQNRNRRFGGI 238
>gi|212696917|ref|ZP_03305045.1| hypothetical protein ANHYDRO_01480 [Anaerococcus hydrogenalis DSM
7454]
gi|212676207|gb|EEB35814.1| hypothetical protein ANHYDRO_01480 [Anaerococcus hydrogenalis DSM
7454]
Length = 259
Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats.
Identities = 94/241 (39%), Positives = 149/241 (61%), Gaps = 4/241 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ +M +H+ II+DGNGRWA + +PR GH++G E +I A E GIK LT+
Sbjct: 21 LEGRLMKEKELNHLAIILDGNGRWAKNKNMPRSMGHKEGSENVVDIALYAKEKGIKYLTL 80
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+RP E++ L+KL+ F+K L +N +K+ +IG+ L + + +
Sbjct: 81 YAFSTENWKRPKIEVNYLMKLLAKFIKDKTKLLMENEVKLNIIGDISKLPEKTMRACLDV 140
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ T+ N L L +A NY R EI +A K++ +D + +D I+ YL T ++P
Sbjct: 141 CELTKNNDQLVLNMAINYGGRSEIVKAFKDMAKD----GIDFEKIDEDDISNYLYTKNMP 196
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRTGG+ R+S+FL++Q+AY+E+ F WPDFS++ A++ + RDRR+GGL+
Sbjct: 197 DPDLLIRTGGDLRISNFLIYQMAYTEYYFTDVLWPDFSKKDLDKAVDSFYGRDRRYGGLN 256
Query: 241 K 241
+
Sbjct: 257 E 257
>gi|119946593|ref|YP_944273.1| undecaprenyl diphosphate synthase [Psychromonas ingrahamii 37]
gi|119865197|gb|ABM04674.1| Undecaprenyl pyrophosphate synthetase [Psychromonas ingrahamii 37]
Length = 259
Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats.
Identities = 91/231 (39%), Positives = 146/231 (63%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA ++G R GH+ G++ +A A+E ++ LT+FAFS NW+RP
Sbjct: 27 RHVAIIMDGNGRWAQSKGKHRVLGHKHGVQSLRRAIAFASEQKLEALTLFAFSSENWQRP 86
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
V E+ L+ L + L L+KNNIK++VIG + + + EAE++T+ NTGL
Sbjct: 87 VQEVDMLMALFFTVLSSEVKKLQKNNIKLKVIGELSGFSEGLQKKIIEAENRTQANTGLV 146
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+ +A NY R +I++A K + + +G + D++ L+ +++P DL+IRTGG+
Sbjct: 147 VNVAANYGGRWDITQATKKLATLVAAGKLKVEDINEQLLNNVTCLAELPPVDLLIRTGGD 206
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+R+S+F+LWQ+AY+EF F WPDF + F +AL+ ++ ++RRFG +
Sbjct: 207 QRISNFILWQLAYAEFYFTDVLWPDFDGQEFQYALDVFSSKERRFGKTGAQ 257
>gi|254480175|ref|ZP_05093423.1| undecaprenyl pyrophosphate synthetase 1 [marine gamma
proteobacterium HTCC2148]
gi|214039737|gb|EEB80396.1| undecaprenyl pyrophosphate synthetase 1 [marine gamma
proteobacterium HTCC2148]
Length = 260
Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats.
Identities = 91/228 (39%), Positives = 136/228 (59%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IIMDGN RWA G+P AGHR G+E I+ A G++ LT+FAFS NW
Sbjct: 18 IPRHVAIIMDGNNRWAKRNGVPGPAGHRAGVEAVRNILRACRNHGVEVLTVFAFSSENWG 77
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP+ E+ L+ L+ +L+ L K+ I++R IG R + +++++E T NT
Sbjct: 78 RPLPEVRALLALLSRYLRSEVRELNKDGIRLRFIGERTRFSARLQRLMQQSEHLTAGNTE 137
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L IA +Y + +I++A + + ++++G + D+ LI ++ +D+P PDL IRTG
Sbjct: 138 ATLVIAVDYGGQWDIAQATQKLALEVQAGRLVPQDITPELIDSHISVADLPRPDLCIRTG 197
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
G+ R+S+F+LWQ AYSE F WPDF F AL Y+ R+RRFG
Sbjct: 198 GDARISNFMLWQFAYSELYFTNTLWPDFGELEFARALADYSRRERRFG 245
>gi|320527473|ref|ZP_08028654.1| di-trans,poly-cis-decaprenylcistransferase [Solobacterium moorei
F0204]
gi|320132186|gb|EFW24735.1| di-trans,poly-cis-decaprenylcistransferase [Solobacterium moorei
F0204]
Length = 234
Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats.
Identities = 100/229 (43%), Positives = 141/229 (61%), Gaps = 1/229 (0%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA A+G PR +GH G + I AA E+GIK LT++AFS NW+R
Sbjct: 5 KHLAIIMDGNGRWAKAQGKPRTSGHLVGSDNVRTIAIAADEMGIKYLTLYAFSTENWKRT 64
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E++ ++KL F KK ++R+IG L VL++AE++++ N GL+
Sbjct: 65 ADEVNYIMKLPAFFFKKYMQEFLDRGFRMRIIGELDMLPKATQKVLRDAEEESKDNHGLS 124
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L I NY SR EI A K QD+ G D++ +Y+ T D P DL+IRT GE
Sbjct: 125 LNICMNYGSRREILLAAKKYAQDVVDGKATL-DIEEEDFDQYMMTKDFPPVDLLIRTSGE 183
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
+R+S++LLWQ+AY+E F+PE WP+F+ E+ L++Y RDRRFGG+
Sbjct: 184 QRISNYLLWQIAYAELEFVPESWPEFTPEVLKRCLDEYQNRDRRFGGVK 232
>gi|227892607|ref|ZP_04010412.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus
ultunensis DSM 16047]
gi|227865592|gb|EEJ73013.1| Di-trans,poly-cis-decaprenylcistransferase [Lactobacillus
ultunensis DSM 16047]
Length = 244
Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats.
Identities = 101/233 (43%), Positives = 146/233 (62%), Gaps = 3/233 (1%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+H+ IIMDGNGRWA R PR GHR+G++ I AA ++GIK LT++AFS NW RP
Sbjct: 9 NHLAIIMDGNGRWAKKRHKPRFVGHREGMDNVERITLAADKLGIKVLTLYAFSTENWARP 68
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E++ L+ L F K +L +NN+KV ++G L + +++ A +T NTGL
Sbjct: 69 KEEVAYLMNLPVRFFDKYMPTLMQNNVKVNIMGYLDELPEKTYQIVERAMAETAQNTGLI 128
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV---PDPDLIIRT 188
L AFNY SR EI+ A+K + IE+G + S D+ +I+ +L T + DPDL+IRT
Sbjct: 129 LNFAFNYGSRREITSAMKELGGMIETGELKSEDITEKMISDHLMTGNFGKYQDPDLLIRT 188
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
GE+R+S+FLLWQ+AYSE F + WPDF+ + ++ Y R+RRFG + +
Sbjct: 189 SGEQRISNFLLWQLAYSELAFSDKNWPDFNEDDLRKFVDDYKHRNRRFGKVDE 241
>gi|289548345|ref|YP_003473333.1| undecaprenyl diphosphate synthase [Thermocrinis albus DSM 14484]
gi|289181962|gb|ADC89206.1| undecaprenyl diphosphate synthase [Thermocrinis albus DSM 14484]
Length = 230
Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats.
Identities = 98/235 (41%), Positives = 142/235 (60%), Gaps = 6/235 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M P+H+ IIMDGNGRWA R LPR AGH +G++ EIV A++GI+ L++F FS
Sbjct: 1 MNIKKLPEHVAIIMDGNGRWAKERNLPRIAGHYEGVKRAEEIVDFCADLGIRYLSLFTFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E++ L L + +LK+ LK+ +++V IG R + ++ + E +T
Sbjct: 61 TENWKRPAEEVAALFDLFERYLKEKRQELKEKSVRVIFIGRRDRIPMSLVEEMHRTEKET 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ + +A +Y RD+I RA+ ++ +VD S + LD D+PDPDL
Sbjct: 121 ACGHRITVILAVDYGGRDDIVRAVNHLLHQRV------QEVDESTFRQALDLRDLPDPDL 174
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRTGGEKR+S+F+LW +AY+E F YWPDF RE F AL Y R+RRFG +
Sbjct: 175 LIRTGGEKRISNFMLWNLAYTELYFTEVYWPDFGREEFVKALEDYANRERRFGAV 229
>gi|270159154|ref|ZP_06187810.1| di-trans,poly-cis-decaprenylcistransferase [Legionella longbeachae
D-4968]
gi|289166015|ref|YP_003456153.1| Undecaprenyl pyrophosphate synthetase [Legionella longbeachae
NSW150]
gi|269987493|gb|EEZ93748.1| di-trans,poly-cis-decaprenylcistransferase [Legionella longbeachae
D-4968]
gi|288859188|emb|CBJ13120.1| Undecaprenyl pyrophosphate synthetase [Legionella longbeachae
NSW150]
Length = 252
Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats.
Identities = 98/240 (40%), Positives = 137/240 (57%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P HI I+MDGNGRWA +RGL R GH+ G+E +++ + G+ L++
Sbjct: 13 LRRIVSEQKIPQHIAIVMDGNGRWAESRGLARIEGHKAGVESVKKMIRSCMTKGVPYLSL 72
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW RPV E+S L++L L+K L ++ I++R GNR SL + + EA
Sbjct: 73 FAFSSENWLRPVEEVSFLMELFLESLRKEIAELNQHGIRMRFTGNRSSLSPVLQKQMHEA 132
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E T N L I NY + +++ A K I Q + G + +++ A YLDT +P
Sbjct: 133 EALTAKNEQFTLNIVVNYGGKWDVANAAKKIAQAVLRGELTLDEINEVSFAHYLDTEGLP 192
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL IRT GE R+S+F LWQ+AY+E F WPDF F AL +N R RRFG +S
Sbjct: 193 DPDLFIRTSGELRISNFFLWQLAYTELYFSEVNWPDFGENEFELALASFNKRKRRFGQIS 252
>gi|294812536|ref|ZP_06771179.1| Undecaprenyl pyrophosphate synthetase 2 [Streptomyces clavuligerus
ATCC 27064]
gi|294325135|gb|EFG06778.1| Undecaprenyl pyrophosphate synthetase 2 [Streptomyces clavuligerus
ATCC 27064]
Length = 272
Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats.
Identities = 85/235 (36%), Positives = 135/235 (57%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P+H+ +MDGNGRWA RGLPR GH++G V +++ E+G++NL+++AF
Sbjct: 28 KIPGELVPNHVACVMDGNGRWAKERGLPRTEGHKRGEAVVLDVLKGCLELGVQNLSLYAF 87
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + ++ + + I++R +G L ++ L+ A++
Sbjct: 88 STENWKRSPDEVRFLMGFNRDVIRARRDEMNEMGIRIRWVGRMPRLWKSVVQELQVAQEM 147
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N + L+ NY R EI+ A + I QD+ +G + V+ KYL D+PD D
Sbjct: 148 TKDNDAMTLYFCVNYGGRAEIADAAQKIAQDVAAGRLDPGKVNERTFQKYLYYPDMPDVD 207
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R GE+R S++L+WQ +Y+E VF WPDF R + A +Y RDRRFGG
Sbjct: 208 LFLRPSGEQRTSNYLIWQSSYAEMVFQDVLWPDFDRRDLWRACLEYAKRDRRFGG 262
>gi|42559825|sp|Q8GLK9|UPPS_AQUPY RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|23296071|gb|AAN12288.1| undecaprenyl pyrophosphate [Aquifex pyrophilus]
Length = 231
Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats.
Identities = 106/234 (45%), Positives = 148/234 (63%), Gaps = 6/234 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
MS P+H+ IIMDGNGRWA RGLPR AGH KG EV +IV A E+GIK+LT+FAFS
Sbjct: 1 MSLKIPEHVAIIMDGNGRWARKRGLPRIAGHYKGAEVAEDIVEFAIELGIKHLTLFAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+ L +L++ +L+ L K I+VR IG R ++ +++ +++E E++++
Sbjct: 61 ENWNRPKGEVEALFELLRRYLQTKKDKLYKLGIRVRFIGRRDRINKELVKLMQEIEEESK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
L L +A +Y RD+I RA+K + ++ L + LD S PDPDL+
Sbjct: 121 KFKNLFLNLAVDYGGRDDILRAVKKAV------KLQREEITEELFSSLLDLSCSPDPDLL 174
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRT GEKR+S+FLLW +AY+E F WPDFSRE F AL ++ R R+FG +
Sbjct: 175 IRTAGEKRISNFLLWNLAYTELYFSETLWPDFSREEFLKALEDFSRRKRKFGRV 228
>gi|333027248|ref|ZP_08455312.1| putative undecaprenyl diphosphate synthase [Streptomyces sp.
Tu6071]
gi|332747100|gb|EGJ77541.1| putative undecaprenyl diphosphate synthase [Streptomyces sp.
Tu6071]
Length = 280
Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats.
Identities = 86/235 (36%), Positives = 133/235 (56%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P H+ ++MDGNGRWA RGLPR GH+ G V + + E+GIKN++++AF
Sbjct: 28 KLPAELVPGHVAVVMDGNGRWAKERGLPRTEGHKVGETVVMDAMKGCLELGIKNISLYAF 87
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + + + + + I++R +G L ++ L+ A++Q
Sbjct: 88 STENWKRSPEEVRFLMNFNRDVIARRRDEMDELGIRIRWVGRMPKLWKSVVKELQIAQEQ 147
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N L L+ NY R EI+ A + + +D+ +G + V YL D+PD D
Sbjct: 148 TKDNDALTLYFCVNYGGRAEIADAARRLAEDVAAGRLDPSKVSEKTFQNYLYYPDMPDVD 207
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R GE+R S+FLLWQ +Y+E V+ WPDF R + A +Y RDRRFGG
Sbjct: 208 LFLRPSGEQRTSNFLLWQSSYAEMVYQDVLWPDFDRRDLWRACVEYAKRDRRFGG 262
>gi|297160639|gb|ADI10351.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces
bingchenggensis BCW-1]
Length = 279
Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats.
Identities = 86/235 (36%), Positives = 135/235 (57%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P H+ ++MDGNGRWA RGLPR GH+ G V +++ E+G+KNL+++AF
Sbjct: 28 KIPGELVPKHVAVVMDGNGRWAKERGLPRTEGHKVGEGVVLDVLKGCLEIGVKNLSLYAF 87
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + +++ + + I++R G L + L+ A++Q
Sbjct: 88 STENWKRSPDEVRFLMNFNRDVIRRRRDEMDEMGIRIRWAGRMPKLWKSVAQELQVAQEQ 147
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N + ++ NY R EI+ A K + +D+ +G + V+ AKYL D+PD D
Sbjct: 148 TKDNDAMTMYFCMNYGGRAEIADAAKALAEDVRAGRLDPSKVNEKTFAKYLYYPDMPDVD 207
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R GE+R S++L+WQ AY+E V+ WPDF R + A +Y RDRRFGG
Sbjct: 208 LFLRPSGEQRTSNYLIWQSAYAEMVYQDVLWPDFDRRDLWRACLEYASRDRRFGG 262
>gi|160900376|ref|YP_001565958.1| undecaprenyl diphosphate synthase [Delftia acidovorans SPH-1]
gi|160365960|gb|ABX37573.1| undecaprenyl diphosphate synthase [Delftia acidovorans SPH-1]
Length = 248
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 94/241 (39%), Positives = 135/241 (56%), Gaps = 7/241 (2%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + S + P HI +IMDGNGRWA R LPR AGH++G+E A + G++ LT+F
Sbjct: 1 MTNQDSGAVPRHIAVIMDGNGRWANRRFLPRLAGHKQGVESLRRCARACVQRGVQVLTVF 60
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+S L+ L+ + L K L ++ +++ IG+R L + + L +AE
Sbjct: 61 AFSSENWNRPEEEVSGLMGLLANALAKEVQQLSRDGVRLHFIGDRSGLSEKVCAGLAQAE 120
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T N L L + FNY R +I++A + + + + + L + VPD
Sbjct: 121 QVTAHNNRLVLNVCFNYGGRWDIAQAAARLAEQG-------EPITPQNLDRALALAHVPD 173
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL+IRTGGE R+S+FLLWQ AYSE F WPDF A+ + R+RRFG S
Sbjct: 174 PDLLIRTGGEMRISNFLLWQAAYSELFFSASLWPDFDEACLDEAIAAFTSRERRFGQTSA 233
Query: 242 K 242
+
Sbjct: 234 Q 234
>gi|32491136|ref|NP_871390.1| hypothetical protein WGLp387 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|42559972|sp|Q8D2G7|UPPS_WIGBR RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|25166343|dbj|BAC24533.1| yaeS [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 260
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 95/241 (39%), Positives = 147/241 (60%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + + P HI IIMDGNGRWA RG R GH+ G+E + + A + LT++
Sbjct: 3 LTKIKHINKPRHIAIIMDGNGRWAKNRGKLRIFGHKAGVESAKKAIKFAINNHLNALTLY 62
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP+ E+S+L++L S L S KKNNI++++IG+ + + +K++E
Sbjct: 63 AFSSENWKRPIQEVSDLMELFSSVLNNAIDSFKKNNIRLKIIGDISKFNLKLQKYIKKSE 122
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T N GLNL IA NY R +I + +K I + ++ G + ++ S +++ +++
Sbjct: 123 KITYKNNGLNLNIAANYGGRWDIIQGVKKIAKQVKKGIIYPDQINESNFCRFICMNELVP 182
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRTGGE R+S+FLLWQ+AYSE F WPDF +F +A+N + R+RRFG ++
Sbjct: 183 VDLVIRTGGEHRISNFLLWQIAYSELFFTDVLWPDFDHVIFSNAINSFAKRERRFGKINS 242
Query: 242 K 242
K
Sbjct: 243 K 243
>gi|225873247|ref|YP_002754706.1| undecaprenyl diphosphate synthase [Acidobacterium capsulatum ATCC
51196]
gi|225792464|gb|ACO32554.1| undecaprenyl diphosphate synthase [Acidobacterium capsulatum ATCC
51196]
Length = 261
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 92/241 (38%), Positives = 146/241 (60%), Gaps = 1/241 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P H+ IIMDGNGRWA R L R GH+KG + IV + +G+ LT+
Sbjct: 3 LYRRLDPERMPHHVAIIMDGNGRWAGKRSLKRFLGHQKGADAVQYIVETCSRIGLPWLTL 62
Query: 61 FAFSINN-WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
+AFS+ N +RP +E++ L+ L++++L + NN+++R IG L ++ ++
Sbjct: 63 YAFSLENNLKRPRTEVNFLMMLLRTYLNNNVQRMNDNNVRIRYIGRTEELPGEVRERMQW 122
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV 179
AE+ T NTG L +A NY SR EI A++ I ++++G + D++ I + L T+ +
Sbjct: 123 AEEATVRNTGTTLTLALNYGSRSEIVDAVRRIAAEVKAGKLQPGDINEQDIDRNLYTAYM 182
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDPDL+IRT GE R+S++LLWQ+AY+E + WPD+ A+ +Y R+RRFGGL
Sbjct: 183 PDPDLLIRTSGEMRISNYLLWQIAYTEILVTDRLWPDYRGIHLLEAIEEYQRRERRFGGL 242
Query: 240 S 240
+
Sbjct: 243 N 243
>gi|237785899|ref|YP_002906604.1| Undecaprenyl pyrophosphate synthase [Corynebacterium kroppenstedtii
DSM 44385]
gi|237758811|gb|ACR18061.1| Undecaprenyl pyrophosphate synthase [Corynebacterium kroppenstedtii
DSM 44385]
Length = 251
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 91/236 (38%), Positives = 137/236 (58%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI ++MDGNGRWA RGLPR GH++G V + V E G+ L+ +AFS
Sbjct: 16 LPADLIPRHIALVMDGNGRWARERGLPRTEGHKRGEAVLMDAVDGCLEAGVNTLSAYAFS 75
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRR E+ ++ + L L +++R IG R L ++ L++AE QT
Sbjct: 76 TENWRRSPEEVRFIMGFSRRVLHDHRDELDAKGVRIRWIGRRPRLWRVVIRELEKAEAQT 135
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NT + L + NY R EI+ A+K + + ++SG + D+ I+ +L ++PD DL
Sbjct: 136 VNNTRMTLNMCINYGGRAEIADAMKLVAEKVQSGEISPSDITEKNISSFLYDPEMPDVDL 195
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
+R GEKR S+FLLWQ AY+E+VF +PDF++ + A+ +Y RDRRFGG+
Sbjct: 196 FLRPSGEKRTSNFLLWQSAYAEYVFQDVLFPDFTKNHIWAAIKEYAHRDRRFGGVK 251
>gi|239617980|ref|YP_002941302.1| undecaprenyl diphosphate synthase [Kosmotoga olearia TBF 19.5.1]
gi|239506811|gb|ACR80298.1| undecaprenyl diphosphate synthase [Kosmotoga olearia TBF 19.5.1]
Length = 231
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 97/233 (41%), Positives = 135/233 (57%), Gaps = 6/233 (2%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HI IIMDGNGRWA RGL R GH+KG EV + + AAE+GI+ LT++AFS NW
Sbjct: 2 KIPTHIAIIMDGNGRWAKQRGLRRTEGHKKGAEVADSVARWAAELGIRYLTLYAFSTENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP E+ L L+ ++ + IK++ +G L +I + E +T N
Sbjct: 62 KRPKEEVEFLFNLLVRYINNRLNEIINEGIKLKFLGRIQQLPGNIRRFCENIEQKTAKND 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
LNL IA NY R EI A+ I + VD + +YL ++P+PDLIIRT
Sbjct: 122 RLNLIIALNYGGRAEIIDAVNKIL------AAKLKKVDEHIFERYLYLPEMPEPDLIIRT 175
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
GEKRLS+FL+W+ AYSE F + WP+F+++ F A+ Y+ R R+FG + K
Sbjct: 176 SGEKRLSNFLMWESAYSELYFCEKLWPEFTKDDFLQAIEDYSRRKRKFGAVIK 228
>gi|33592521|ref|NP_880165.1| undecaprenyl pyrophosphate synthetase [Bordetella pertussis Tohama
I]
gi|42559772|sp|Q7VYC6|UPPS_BORPE RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|42559773|sp|Q7WA56|UPPS_BORPA RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|42559774|sp|Q7WJ90|UPPS_BORBR RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|33572167|emb|CAE41713.1| undecaprenyl pyrophosphate synthetase [Bordetella pertussis Tohama
I]
gi|332381939|gb|AEE66786.1| undecaprenyl pyrophosphate synthetase [Bordetella pertussis CS]
Length = 254
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 90/236 (38%), Positives = 143/236 (60%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ P H+ IIMDGNGRWA R LPR AGH KG+ +V A G++ LT+FAFS
Sbjct: 12 TGDIPRHVAIIMDGNGRWATRRHLPRTAGHAKGVHAVRRVVEACGRRGVRYLTLFAFSSE 71
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+S L++L L++ L+ +++ V+G+ + + + ++ +A+++T
Sbjct: 72 NWRRPADEVSLLMRLFVQALEREVDKLQDQGVRLHVVGDLSAFEPKLQELIAQAQERTEH 131
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N L+L +A NY R +I +A + + + + +D + +A++L + P+PDL I
Sbjct: 132 NDRLHLTVAANYGGRWDILQATRAMLRADPGLAQDPDRIDEARLAEHLSMAWAPEPDLFI 191
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE+R+S+FL+WQ+AY+EF F ++WPDF + A Y R+RRFG S +
Sbjct: 192 RTGGEQRISNFLVWQLAYAEFYFTEQFWPDFGADELDAAFEWYRTRERRFGRTSAQ 247
>gi|157738402|ref|YP_001491086.1| undecaprenyl pyrophosphate synthetase [Arcobacter butzleri RM4018]
gi|315636697|ref|ZP_07891927.1| di-trans,poly-cis-decaprenylcistransferase [Arcobacter butzleri
JV22]
gi|157700256|gb|ABV68416.1| undecaprenyl pyrophosphate synthetase [Arcobacter butzleri RM4018]
gi|315479012|gb|EFU69715.1| di-trans,poly-cis-decaprenylcistransferase [Arcobacter butzleri
JV22]
Length = 234
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 97/231 (41%), Positives = 135/231 (58%), Gaps = 7/231 (3%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HI IIMDGNGRWA RGL R AGH +G +V EI A++GI+ LT++AFS NW
Sbjct: 11 GFPSHIAIIMDGNGRWAKQRGLKRTAGHEEGAKVVREITKFCAKIGIEYLTLYAFSTENW 70
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+ L+KL++ LK +NNI+ + IG+ + ++ + E++T +
Sbjct: 71 ARPKLEVEYLMKLLEKHLKNELEVFLENNIRFKAIGDLSKFSKSLQNIINQIEEKTSSCS 130
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL +A NY S+DEI RAIK + + ++ + LDT+ + DL+IRT
Sbjct: 131 GLTQVLALNYGSKDEIIRAIKKLNEQHL-------EITEENLESCLDTAGMSPVDLLIRT 183
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE RLS++LLWQ AY+E F YWPDFS L+ Y R+RRFGG+
Sbjct: 184 SGEVRLSNYLLWQNAYAEMFFTKTYWPDFSVAELKKILDDYKNRERRFGGI 234
>gi|329912032|ref|ZP_08275643.1| Undecaprenyl pyrophosphate synthetase [Oxalobacteraceae bacterium
IMCC9480]
gi|327545755|gb|EGF30889.1| Undecaprenyl pyrophosphate synthetase [Oxalobacteraceae bacterium
IMCC9480]
Length = 237
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 98/233 (42%), Positives = 135/233 (57%), Gaps = 4/233 (1%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI IIMDGNGRWA R LPR GH KG++ V A A G++ LT+FAFS NWR
Sbjct: 1 MPRHIAIIMDGNGRWATKRFLPRVTGHVKGVDAVRGTVEACARSGVEFLTLFAFSSENWR 60
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+S L++L + L + + N I+++V+G DD + ++ AE +T NTG
Sbjct: 61 RPADEVSLLMRLFVTALDREVAKMHANGIRLKVVGELSRFDDKLRRMISNAERRTAGNTG 120
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L + I NY R +I +A+ + + D +A +L + P+PDL IRTG
Sbjct: 121 LTVTICANYGGRWDIMQAMNQLVAQQPGRA----DFTEDDLAPFLSMAYAPEPDLFIRTG 176
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+R+S+FLLWQ+AYSE F YWPDF A+ Y R+RRFG S++
Sbjct: 177 GEERVSNFLLWQLAYSEMYFTDTYWPDFDAAQIQLAITSYQQRERRFGRTSEQ 229
>gi|217979930|ref|YP_002364077.1| undecaprenyl diphosphate synthase [Methylocella silvestris BL2]
gi|217505306|gb|ACK52715.1| undecaprenyl diphosphate synthase [Methylocella silvestris BL2]
Length = 260
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 117/232 (50%), Positives = 164/232 (70%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+G+IMDGNGRWAA+RGLPR GHR+G+E V A + + LT+++FS+ NW
Sbjct: 19 RVPVHVGVIMDGNGRWAASRGLPRIEGHRRGLEALRGAVRTAIDFKLDYLTVYSFSMENW 78
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RPV+E+++L+ L+K F++ LKK N+K++VIG R L DI +L+EAE T T
Sbjct: 79 SRPVTEVADLMGLLKRFIRNDLADLKKANVKIKVIGRRDDLKPDIRALLQEAETATCGGT 138
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GLNL +AFNY +R EI+ A + + ++ SG + D+D + A LDT+ VPDPDLIIRT
Sbjct: 139 GLNLIVAFNYGARQEIAAAARALAEEARSGLIDPADIDEAFFASRLDTAGVPDPDLIIRT 198
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
GE+RLS+FL+WQ AYSEFVF+P +WPDF R+ F A+ ++ R+RRFGG++
Sbjct: 199 SGEQRLSNFLMWQAAYSEFVFLPIHWPDFDRKAFAAAVEEFGARERRFGGVT 250
>gi|302518923|ref|ZP_07271265.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. SPB78]
gi|318059907|ref|ZP_07978630.1| undecaprenyl pyrophosphate synthase [Streptomyces sp. SA3_actG]
gi|318076740|ref|ZP_07984072.1| undecaprenyl pyrophosphate synthase [Streptomyces sp. SA3_actF]
gi|302427818|gb|EFK99633.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. SPB78]
Length = 280
Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats.
Identities = 86/235 (36%), Positives = 133/235 (56%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P H+ ++MDGNGRWA RGLPR GH+ G V + + E+GIKN++++AF
Sbjct: 28 KLPAELVPGHVAVVMDGNGRWAKERGLPRTEGHKVGETVVMDAMKGCLELGIKNISLYAF 87
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + + + + + I++R +G L ++ L+ A++Q
Sbjct: 88 STENWKRSPEEVRFLMNFNRDVIARRRDEMDELGIRIRWVGRMPKLWKSVVKELQIAQEQ 147
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N L L+ NY R EI+ A + + +D+ +G + V YL D+PD D
Sbjct: 148 TKDNDALTLYFCVNYGGRAEIADAARRLAEDVAAGRLDPSKVSEKTFQDYLYYPDMPDVD 207
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R GE+R S+FLLWQ +Y+E V+ WPDF R + A +Y RDRRFGG
Sbjct: 208 LFLRPSGEQRTSNFLLWQSSYAEMVYQDVLWPDFDRRDLWRACVEYAKRDRRFGG 262
>gi|254392568|ref|ZP_05007745.1| undecaprenyl pyrophosphate synthetase [Streptomyces clavuligerus
ATCC 27064]
gi|197706232|gb|EDY52044.1| undecaprenyl pyrophosphate synthetase [Streptomyces clavuligerus
ATCC 27064]
Length = 275
Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats.
Identities = 85/235 (36%), Positives = 135/235 (57%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P+H+ +MDGNGRWA RGLPR GH++G V +++ E+G++NL+++AF
Sbjct: 31 KIPGELVPNHVACVMDGNGRWAKERGLPRTEGHKRGEAVVLDVLKGCLELGVQNLSLYAF 90
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + ++ + + I++R +G L ++ L+ A++
Sbjct: 91 STENWKRSPDEVRFLMGFNRDVIRARRDEMNEMGIRIRWVGRMPRLWKSVVQELQVAQEM 150
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N + L+ NY R EI+ A + I QD+ +G + V+ KYL D+PD D
Sbjct: 151 TKDNDAMTLYFCVNYGGRAEIADAAQKIAQDVAAGRLDPGKVNERTFQKYLYYPDMPDVD 210
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R GE+R S++L+WQ +Y+E VF WPDF R + A +Y RDRRFGG
Sbjct: 211 LFLRPSGEQRTSNYLIWQSSYAEMVFQDVLWPDFDRRDLWRACLEYAKRDRRFGG 265
>gi|319775148|ref|YP_004137636.1| undecaprenyl pyrophosphate synthase [Haemophilus influenzae F3047]
gi|317449739|emb|CBY85946.1| undecaprenyl pyrophosphate synthase [Haemophilus influenzae F3047]
Length = 223
Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats.
Identities = 91/223 (40%), Positives = 131/223 (58%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA + R GH G+ + VA A ++G++ LT++AFS NW RP EIS
Sbjct: 1 MDGNGRWAKQKNKMRIFGHTNGVTAVRKAVAYARQIGVEVLTLYAFSSENWSRPEQEISA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ L L + L KNNI +++IG+ + + +K+AE+ T NT L L IA N
Sbjct: 61 LMSLFMQALDREVKKLHKNNICLKIIGDVSRFSETLQEKIKKAENLTEKNTALTLNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y +I +A K I + ++ + D+++S +L T + P DL+IRT GE+R+S+F
Sbjct: 121 YGGCWDIIQAAKQIAEKVKKEEMSVSDINNSTFQHHLATQNAPPVDLLIRTSGEQRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LLWQ+AY+E F WPDF++ F HA+ Y R RRFGG
Sbjct: 181 LLWQIAYAELYFSDVLWPDFNQLEFNHAIASYQQRHRRFGGTE 223
>gi|302534317|ref|ZP_07286659.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. C]
gi|302443212|gb|EFL15028.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. C]
Length = 273
Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats.
Identities = 87/235 (37%), Positives = 137/235 (58%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P+H+ I+MDGNGRWA RGLPR GH+ G V +++ E+G+KNL+++AF
Sbjct: 28 KIPGELVPNHVAIVMDGNGRWAKERGLPRTEGHKVGEGVVLDVLKGCLEMGVKNLSLYAF 87
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + +++ + + I++R +G + ++ L+ A++Q
Sbjct: 88 STENWKRTPDEVRFLMNFNRDVIRRRRDEMNELGIRIRWVGRMPKMWKSVVQELQIAQEQ 147
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T N + L+ NY R EI+ A + I +D+ +G + V+ AKY+ D+PD D
Sbjct: 148 TVDNDAMTLYFCVNYGGRAEIADAAQAIARDVAAGKLDPSKVNEKTFAKYIYYPDMPDVD 207
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R GE+R S++L+WQ AY+E VF WPDF R + A +Y RDRRFGG
Sbjct: 208 LFLRPSGEQRTSNYLIWQSAYAEMVFQDVLWPDFDRRNLWDACLEYAQRDRRFGG 262
>gi|329120953|ref|ZP_08249584.1| di-trans,poly-cis-decaprenylcistransferase [Dialister
micraerophilus DSM 19965]
gi|327471115|gb|EGF16569.1| di-trans,poly-cis-decaprenylcistransferase [Dialister
micraerophilus DSM 19965]
Length = 240
Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats.
Identities = 96/230 (41%), Positives = 136/230 (59%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ II+DGNGRW G R GH+ G +IV +AA GIK LT++AFS NW+
Sbjct: 7 MPQHVAIILDGNGRWGKKHGRERTYGHKFGAANVKKIVRSAASSGIKKLTLYAFSTENWK 66
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ L+ L K +L + L ++N++V V+G+ L + +K E+ T+ N G
Sbjct: 67 RPKLEVKFLMTLFKEYLIEQLRELTEDNVQVHVVGDVSKLSKSLQEEIKSCENDTKNNDG 126
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L IA NY R E+ A + I D+++G + ++D I L SD D DL+IRTG
Sbjct: 127 LILNIAINYGGRQELIHAFRKIASDVKAGILNPSEIDEENIKDALYASDADDVDLLIRTG 186
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE+R+S+FLLWQ++YSE F WPDF +A+ + R+RRFGGL
Sbjct: 187 GEQRISNFLLWQISYSELYFTSVLWPDFDERELENAIKWFVNRNRRFGGL 236
>gi|300311497|ref|YP_003775589.1| undecaprenyl pyrophosphate synthetase [Herbaspirillum seropedicae
SmR1]
gi|300074282|gb|ADJ63681.1| undecaprenyl pyrophosphate synthetase protein [Herbaspirillum
seropedicae SmR1]
Length = 252
Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats.
Identities = 100/241 (41%), Positives = 145/241 (60%), Gaps = 4/241 (1%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+A +S+ P H+ IIMDGNGRWA R LPR AGH KG++ IV A AE GI+ LT+F
Sbjct: 8 LAVPETSAVPRHVAIIMDGNGRWATKRFLPRVAGHAKGVDAVRSIVEACAERGIEFLTLF 67
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP E+S L++L + L++ + N I+++++G+ D + + +AE
Sbjct: 68 AFSSENWRRPADEVSVLMRLFMTVLEREVGKMAANGIRLKIVGDMSRFDPKLQEMAAKAE 127
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
QT N+ L L + NY R ++ +A+ + +D + D +A YL + P+
Sbjct: 128 AQTAANSRLTLTVCANYGGRWDVMQAVSKMIKDKPGHA----DFTEEELAPYLAMAYAPE 183
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL IRTGGE+R+S+FLLWQ+AYSE F +WPDF + A+ Y R+RRFG S
Sbjct: 184 PDLFIRTGGEQRISNFLLWQLAYSELYFTETFWPDFDAKALDLAIASYQQRERRFGRTSA 243
Query: 242 K 242
+
Sbjct: 244 Q 244
>gi|325107196|ref|YP_004268264.1| undecaprenyl pyrophosphate synthetase [Planctomyces brasiliensis
DSM 5305]
gi|324967464|gb|ADY58242.1| Undecaprenyl pyrophosphate synthetase [Planctomyces brasiliensis
DSM 5305]
Length = 260
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 93/240 (38%), Positives = 145/240 (60%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + P HI +IMDGNGRWA ARGLPR GHR+G I+ A E+G++ LT++
Sbjct: 21 LEQVDREKMPRHIAVIMDGNGRWAQARGLPRIEGHRQGANSVRAIIEAGVELGLEQLTLY 80
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
S NW+RP +E+S L+ L++ +L + + +I+ VIG L D + +
Sbjct: 81 CLSSENWKRPAAELSFLMYLLERYLVDERPEILRQDIQFSVIGRIEDLSDAVRREIDTTR 140
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
D + N G+ L +A NY +R EI A++++ + + +G + ++D L++ + T+ +PD
Sbjct: 141 DLSSGNGGMRLCLALNYGARGEIVDAVRHLAERVAAGELAPEEIDEQLLSDSMYTAGMPD 200
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL++RT GE R S+FLLWQ++YSE ++WPDF + F HA+ +Y R RRFGGL
Sbjct: 201 PDLVVRTSGEMRFSNFLLWQISYSELWVTDKFWPDFGKADFIHAIREYAGRSRRFGGLKA 260
>gi|332701343|ref|ZP_08421431.1| Undecaprenyl pyrophosphate synthase [Desulfovibrio africanus str.
Walvis Bay]
gi|332551492|gb|EGJ48536.1| Undecaprenyl pyrophosphate synthase [Desulfovibrio africanus str.
Walvis Bay]
Length = 238
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 93/235 (39%), Positives = 135/235 (57%), Gaps = 5/235 (2%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P H+ +IMDGNGRWAA RG+ R GH G++ ++ +GI++LT++AFS NW
Sbjct: 2 SLPQHLALIMDGNGRWAAHRGMSRTEGHEAGVKTAQKVYRHCRNLGIRHLTLYAFSKENW 61
Query: 69 RRPVSEISELVKL-IKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
+RP E+S L L + F +K L + +I+++V+G L VL+ ++T N
Sbjct: 62 QRPKDEVSFLFGLVTRYFTQKELRELMERDIRLQVLGELEDLPATTRKVLESYMEKTAGN 121
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+ + L +A NYS RDEI RA + + QD + ++ +A L T PDPD I+R
Sbjct: 122 SSMTLNLALNYSGRDEIVRAARLLLQD----GLRPEEITEEALASRLYTVGQPDPDFIVR 177
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
T GE RLS++LL+Q AYSE F +WPDF AL +Y R RRFG ++
Sbjct: 178 TSGEYRLSNYLLYQAAYSELYFTHTHWPDFDEAELDKALAEYAHRQRRFGRTGEQ 232
>gi|77919513|ref|YP_357328.1| undecaprenyl diphosphate synthase [Pelobacter carbinolicus DSM
2380]
gi|77545596|gb|ABA89158.1| Undecaprenyl pyrophosphate synthetase [Pelobacter carbinolicus DSM
2380]
Length = 251
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 92/234 (39%), Positives = 137/234 (58%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ IIMDGNGRWA RGLPR GH G+E I+ + +G+ LT++AFS NW
Sbjct: 11 RIPRHLAIIMDGNGRWAEQRGLPRILGHHHGVETAKVIIEESRRLGLSYLTLYAFSSENW 70
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+ L+ L+ +FL++ +L + I++ VIG L + + L ++T N
Sbjct: 71 GRPEEEVDSLMSLLNTFLERELETLLTHRIRLNVIGAIHRLPEAVQHTLIGTMERTANNR 130
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+ L +A +Y +RDEI A+K I ++ G + VD + +L T+ +PDPD +IRT
Sbjct: 131 DMVLTLALSYGARDEILGAVKAIAGEVAVGRLGLDAVDEECFSGFLQTAGMPDPDFLIRT 190
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE R+S+FLLWQ+AY+E F P WPDFS A +++ R RR+G + +
Sbjct: 191 SGEIRISNFLLWQLAYAEIYFTPVLWPDFSPTHLHEAFTEFSRRQRRYGLTADQ 244
>gi|292489222|ref|YP_003532109.1| undecaprenyl pyrophosphate synthetase [Erwinia amylovora CFBP1430]
gi|292898544|ref|YP_003537913.1| undecaprenyl pyrophosphate synthetase [Erwinia amylovora ATCC
49946]
gi|291198392|emb|CBJ45499.1| undecaprenyl pyrophosphate synthetase [Erwinia amylovora ATCC
49946]
gi|291554656|emb|CBA22345.1| undecaprenyl pyrophosphate synthetase [Erwinia amylovora CFBP1430]
gi|312173383|emb|CBX81637.1| undecaprenyl pyrophosphate synthetase [Erwinia amylovora ATCC
BAA-2158]
Length = 250
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 92/233 (39%), Positives = 139/233 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R +GH+ G++ V+ A + LT++AFS NW R
Sbjct: 17 PRHVAIIMDGNGRWAKNQGKLRISGHKAGVKSVRRAVSFAVSRKLDALTLYAFSSENWNR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L++L L SL+K+N+++++IG+ + + ++ AE+ T+ N GL
Sbjct: 77 PQLEVMALMELFVWALDSEVKSLQKHNVRLKIIGDISRFNSRLQERIRRAEELTQQNNGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I ++ I + ++ G + ++ + L +DV DL+IRTGG
Sbjct: 137 TLNIAANYGGRWDIIHGVRQIAEQVQEGLLRPDQIEEETLGTRLCLNDVAPVDLVIRTGG 196
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
E R+S+FLLWQVAY+EF F WPDF ++F ALN + R+RRFGG + G
Sbjct: 197 EHRISNFLLWQVAYAEFWFTDTLWPDFDEQVFEGALNAFAQRERRFGGATPGG 249
>gi|294677164|ref|YP_003577779.1| di-trans,poly-cis-decaprenylcistransferase [Rhodobacter capsulatus
SB 1003]
gi|294475984|gb|ADE85372.1| di-trans,poly-cis-decaprenylcistransferase [Rhodobacter capsulatus
SB 1003]
Length = 250
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 96/228 (42%), Positives = 143/228 (62%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ +IMDGNGRWA RG PR GHRKG E EIV A ++G+K LT++AFS NW+R
Sbjct: 22 HVAMIMDGNGRWAKQRGWPRLVGHRKGAERVKEIVRACPDLGVKWLTLYAFSTENWKRST 81
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+ L+ L ++++ ++ +++R IG+R LD + ++ E +T +N LNL
Sbjct: 82 EEVLGLMALFARYIQREADAMSAEGVRMRFIGDRGPLDGKLRGLMDGIEARTAMNARLNL 141
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A NY RDE+ RA +I Q++ +G + + ++ A +LDT+ +PDPDL+IR+ GE
Sbjct: 142 TVAINYGGRDELRRAAVSIAQEVAAGRLAPEAITEAVFAGHLDTAAIPDPDLVIRSSGET 201
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
R S+FL WQ AY+E+ F P WPDF+ L Q+ R+RRFGG+
Sbjct: 202 RTSNFLPWQAAYAEYDFTPTLWPDFNPAALAAILAQFGGRERRFGGVK 249
>gi|315038581|ref|YP_004032149.1| undecaprenyl pyrophosphate synthase [Lactobacillus amylovorus GRL
1112]
gi|325957055|ref|YP_004292467.1| undecaprenyl pyrophosphate synthase [Lactobacillus acidophilus
30SC]
gi|312276714|gb|ADQ59354.1| undecaprenyl pyrophosphate synthase [Lactobacillus amylovorus GRL
1112]
gi|325333620|gb|ADZ07528.1| undecaprenyl pyrophosphate synthase [Lactobacillus acidophilus
30SC]
gi|327183778|gb|AEA32225.1| undecaprenyl pyrophosphate synthase [Lactobacillus amylovorus GRL
1118]
Length = 244
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 101/233 (43%), Positives = 145/233 (62%), Gaps = 3/233 (1%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+H+ IIMDGNGRWA R PR GHR+G++ I AA ++GIK LT++AFS NW RP
Sbjct: 9 NHLAIIMDGNGRWAKKRHKPRFVGHREGMDNVERITLAADKLGIKVLTLYAFSTENWARP 68
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E++ L+ L F K +L +NN+KV ++G L + +++ A +T NTGL
Sbjct: 69 KEEVAYLMNLPVRFFDKYMPTLMENNVKVNIMGYLDELPEKTYQIVQRAMAETANNTGLV 128
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV---PDPDLIIRT 188
L AFNY SR EI+ A++ I IE+G + S D+ +I+ +L T DPDL+IRT
Sbjct: 129 LNFAFNYGSRREITSAMQEIGGLIEAGELKSEDITEKMISDHLMTGHFGKYQDPDLLIRT 188
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
GE+R+S+FLLWQ+AYSE F + WPDF + +N++ R+RRFG + +
Sbjct: 189 SGEQRISNFLLWQLAYSELAFSDKNWPDFDADDLKQFVNEFKHRNRRFGKVDE 241
>gi|189218030|ref|YP_001938672.1| Undecaprenyl pyrophosphate synthase [Methylacidiphilum infernorum
V4]
gi|189184888|gb|ACD82073.1| Undecaprenyl pyrophosphate synthase [Methylacidiphilum infernorum
V4]
Length = 260
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 104/238 (43%), Positives = 141/238 (59%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ S + P+H+ IIMDGNGRWA R L R GHR+G+ E+V A EVGI LT++ FS
Sbjct: 22 LDSRNIPEHVAIIMDGNGRWAEKRNLARIEGHREGLNAAKEVVQTALEVGIHYLTLYVFS 81
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
++NW+RP EI L+++ + FL K L + IK+ IG R L + L +T
Sbjct: 82 VDNWKRPYFEIKALMEMFEDFLSKNEEELIEKGIKLVTIGRRTDLPKGLQKQLLSTCKKT 141
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N L L +A +Y SR +I A+K I + G V D++ L +L TS PDPDL
Sbjct: 142 ESNFKLVLTLALSYGSRLDILDAVKEIAKKALHGQVKISDINEELFKSHLSTSFCPDPDL 201
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IRT GE RLS+FLLW+ +Y+EF F YWPDF R+ F AL + R RRFG ++ K
Sbjct: 202 LIRTSGEMRLSNFLLWESSYTEFYFTTTYWPDFRRQEFLEALGTFAKRQRRFGQVAVK 259
>gi|223985635|ref|ZP_03635685.1| hypothetical protein HOLDEFILI_02991 [Holdemania filiformis DSM
12042]
gi|223962402|gb|EEF66864.1| hypothetical protein HOLDEFILI_02991 [Holdemania filiformis DSM
12042]
Length = 233
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 98/229 (42%), Positives = 138/229 (60%), Gaps = 1/229 (0%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA +G R AGH +G+E I AA ++G++ LT+FAFS NW+RP
Sbjct: 6 RHVAIIMDGNGRWAKKQGKVRTAGHYQGVENVRNIAIAANDLGVEVLTVFAFSTENWKRP 65
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E+S L+KL F K+ L + NI++ +IG + + VL+ A D T+ NTG+
Sbjct: 66 EEEVSYLMKLPSVFFKRFLKELMEKNIRITMIGEMDQIPKETAKVLQAAIDDTKANTGMI 125
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L A NY R EI A + +D+ S + +YL + P DL+IRT GE
Sbjct: 126 LNFAMNYGGRREIVLAAQAYARDV-RDGKASDTISDEQFGQYLMGAQFPPLDLLIRTSGE 184
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
R+S+FLLW++AY+E +F+ E WPDF+ EL L+Q+ RDRRFGG+
Sbjct: 185 YRISNFLLWEIAYAEMIFVDEAWPDFTPELLKQCLDQFKQRDRRFGGVK 233
>gi|206890196|ref|YP_002248077.1| di-trans,poly-cis-decaprenylcistransferase [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|206742134|gb|ACI21191.1| di-trans,poly-cis-decaprenylcistransferase [Thermodesulfovibrio
yellowstonii DSM 11347]
Length = 235
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 100/230 (43%), Positives = 141/230 (61%), Gaps = 4/230 (1%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+GIIMDGNGRWA RGLPR GH++G+E EI+ +A + I LT +AFSI NW+RP
Sbjct: 6 KHVGIIMDGNGRWAQLRGLPRYEGHKRGVEKVKEIIRSAIRLNIDVLTFYAFSIENWQRP 65
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E+ ++ L+++ L+K + ++ ++IGNR + +IL V++E E T L
Sbjct: 66 KKEVEIIMDLLQNHLRKETQTFISQGVRFKMIGNRDMIPKNILNVIEETESATSECKELI 125
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
A +Y RDEI RA+K I + VD + LDT+ +P+PDLIIRT GE
Sbjct: 126 AQFAISYGGRDEIIRAVKKIII----NNTVPEKVDEDFFSSMLDTAGIPEPDLIIRTSGE 181
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
+R+S+FL+WQ AYSEF F WPDF+ E F A+ + R RRFG +S+
Sbjct: 182 QRISNFLVWQSAYSEFYFSQTLWPDFTEEEFTEAILDFQKRQRRFGKVSE 231
>gi|327399654|ref|YP_004340523.1| Undecaprenyl pyrophosphate synthase [Hippea maritima DSM 10411]
gi|327182283|gb|AEA34464.1| Undecaprenyl pyrophosphate synthase [Hippea maritima DSM 10411]
Length = 234
Score = 276 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 106/234 (45%), Positives = 149/234 (63%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
MS + P H+ IIMDGNGRWA +G R GH G V ++IV AA E G+K LT++ FS
Sbjct: 1 MSENFPYHVAIIMDGNGRWAKQQGKNRTYGHYIGSNVVDKIVEAAIEEGVKYLTLYTFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP SEI L+ L+K L K + N+K VIG+ +D+I + + + T
Sbjct: 61 ENWKRPKSEIRFLMFLLKKQLIKKRELFLRKNVKFNVIGDIDVFEDEIKENINQLIEITE 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
NTGL + +A NY R EI RA K I + ++ G + ++D L A++L T D+PD DL+
Sbjct: 121 NNTGLRVSLALNYGGRYEIVRASKEIARKVKEGLIEPDEIDEKLFAQHLYTYDMPDVDLL 180
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRTGGEKR+S+FLLWQ++Y EFVF ++WP+FS + A+ ++ R R+FGGL
Sbjct: 181 IRTGGEKRVSNFLLWQISYGEFVFFDKHWPEFSSDDLKVAIEEFKRRKRKFGGL 234
>gi|71066088|ref|YP_264815.1| undecaprenyl pyrophosphate synthetase [Psychrobacter arcticus
273-4]
gi|71039073|gb|AAZ19381.1| Undecaprenyl pyrophosphate synthetase [Psychrobacter arcticus
273-4]
Length = 252
Score = 276 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 89/242 (36%), Positives = 141/242 (58%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M+ ++ + P HI +IMDGN R+ L + GH G + + IV GI+ LT+
Sbjct: 3 MLDNLAPALLPRHIAVIMDGNNRYGKVHNLGKGQGHIAGKDALDPIVEYCVSTGIEVLTV 62
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW+RP SE++ L+ L++ + + + K I++R IG+R L DD+ ++ +A
Sbjct: 63 FAFSSENWQRPPSEVALLMHLLRLTISEQMPRMLKYRIRLRFIGDRSQLSDDLQILMADA 122
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E +T + L IA +Y + +I+ A K + Q +++G + D+D + +Y+ +D P
Sbjct: 123 EAKTANFDAMTLVIAISYGGQWDIAHAAKQLVQQVQAGHLAIEDIDKEKLGEYVQLADAP 182
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
+ D++IRTGGE RLS+FLLWQ AY+E F P WPDF + L + R RRFG S
Sbjct: 183 EVDMLIRTGGEYRLSNFLLWQSAYAELFFTPTLWPDFRVDELAAMLEDFAQRQRRFGKTS 242
Query: 241 KK 242
++
Sbjct: 243 EQ 244
>gi|220912715|ref|YP_002488024.1| undecaprenyl diphosphate synthase [Arthrobacter chlorophenolicus
A6]
gi|219859593|gb|ACL39935.1| undecaprenyl diphosphate synthase [Arthrobacter chlorophenolicus
A6]
Length = 275
Score = 276 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 95/235 (40%), Positives = 140/235 (59%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S+ + P H+ I+MDGNGRWA RGLPR GH+ G +++A A ++GI+ ++++AF
Sbjct: 31 SIPAEFIPRHVAIVMDGNGRWANQRGLPRIEGHKAGEPALLDVMAGAIQLGIEYVSVYAF 90
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRR E+ L+ K L++ L + ++VR G R L ++ L+EAE
Sbjct: 91 STENWRRSPEEVRFLMGFNKDVLRRQRNQLDEWGVRVRWSGRRPKLWGSVIRELEEAEAY 150
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T N+ L + NY R EI+ A+ I ++ +G + + I KYLD D+PD D
Sbjct: 151 TAGNSTCTLTMCVNYGGRAEITDAVSAIAAEVAAGRLKPGAITERTIQKYLDEPDLPDVD 210
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R+ GE+RLS+FLLWQ AY+EFVF+ WPD R + A+ +Y RDRR+GG
Sbjct: 211 LFLRSSGEQRLSNFLLWQSAYAEFVFMDTLWPDVDRRTLWAAVEEYAQRDRRYGG 265
>gi|163851509|ref|YP_001639552.1| undecaprenyl diphosphate synthase [Methylobacterium extorquens PA1]
gi|218530316|ref|YP_002421132.1| undecaprenyl diphosphate synthase [Methylobacterium
chloromethanicum CM4]
gi|240138676|ref|YP_002963148.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase)
[Methylobacterium extorquens AM1]
gi|254561272|ref|YP_003068367.1| undecaprenyl pyrophosphate synthetase [Methylobacterium extorquens
DM4]
gi|163663114|gb|ABY30481.1| undecaprenyl diphosphate synthase [Methylobacterium extorquens PA1]
gi|218522619|gb|ACK83204.1| undecaprenyl diphosphate synthase [Methylobacterium
chloromethanicum CM4]
gi|240008645|gb|ACS39871.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase)
[Methylobacterium extorquens AM1]
gi|254268550|emb|CAX24507.1| undecaprenyl pyrophosphate synthetase (di-trans,
poly-cis-decaprenylcistransferase) [Methylobacterium
extorquens DM4]
Length = 259
Score = 276 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 119/232 (51%), Positives = 159/232 (68%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWAA+RGLPR GHR+G+E V +A +GI LTI++FS NWRRP
Sbjct: 27 RHVAIIMDGNGRWAASRGLPRFEGHRRGVEAVRRAVRSAITLGIDYLTIYSFSSENWRRP 86
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE+SEL+ L+K F++ L NN+++RVIG+R L DI +L EAE +TR NTGL
Sbjct: 87 PSEVSELMGLLKLFVRGDLADLHANNVRIRVIGDRADLSPDIASLLDEAEARTRANTGLT 146
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L +AFNY R EI RA++ I + G + +++ I + LDT+ +PDPDL+IRT GE
Sbjct: 147 LVVAFNYGGRQEILRAVRRIAASVAEGRLRVDEIELPTITEALDTAGIPDPDLVIRTSGE 206
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
+RLS+FL WQ AY+E+V P +WPDF F A+++Y+ RDRRFGGLS
Sbjct: 207 QRLSNFLTWQTAYAEYVIEPGFWPDFDHAAFLAAVSEYHRRDRRFGGLSAGA 258
>gi|254439174|ref|ZP_05052668.1| undecaprenyl diphosphate synthase [Octadecabacter antarcticus 307]
gi|198254620|gb|EDY78934.1| undecaprenyl diphosphate synthase [Octadecabacter antarcticus 307]
Length = 239
Score = 276 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 105/230 (45%), Positives = 150/230 (65%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA R PR GH G EIV A + G+K LT+FAFS NW+R
Sbjct: 9 PNHVAIIMDGNGRWAQMRKRPRLLGHHAGARRVREIVEACPDQGVKYLTVFAFSTENWKR 68
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
SE++ L+KL + ++++ +L N ++VR IG+R+ LDD ++ ++ E E T N +
Sbjct: 69 TQSEVAGLMKLFRRYIQREARNLLANGVRVRFIGDRVRLDDKLVRLMDELELLTSQNDRV 128
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+L +A NY RDE++RA + + D+ +G + DVD + KYLDT +PDPDL+IRT G
Sbjct: 129 HLTVALNYGGRDEVARATRRLAYDVAAGKLAPKDVDDETLPKYLDTYFLPDPDLVIRTSG 188
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E R+S+FLLWQ AY+E+ FI WPDF+ ++F L + RDRRFG +
Sbjct: 189 EARISNFLLWQSAYAEYEFIDTLWPDFTPDVFASVLTGFKARDRRFGAVK 238
>gi|288819093|ref|YP_003433441.1| undecaprenyl pyrophosphate synthetase [Hydrogenobacter thermophilus
TK-6]
gi|288788493|dbj|BAI70240.1| undecaprenyl pyrophosphate synthetase [Hydrogenobacter thermophilus
TK-6]
gi|308752676|gb|ADO46159.1| undecaprenyl diphosphate synthase [Hydrogenobacter thermophilus
TK-6]
Length = 230
Score = 276 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 95/235 (40%), Positives = 142/235 (60%), Gaps = 6/235 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M S P H+ +IMDGNGRWA RGL R GH +G++ E+V A E+GIK LT+F FS
Sbjct: 1 MTSLKIPTHLAVIMDGNGRWAKERGLSRIHGHYQGVKRAEELVDACIELGIKYLTLFTFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+ L L +S+LK+ L NI+++ IG R L +++ ++++ E+ +
Sbjct: 61 TENWKRPEEEVKALFMLFESYLKEKKDELISRNIRLKFIGRRDRLPKELVMLMEQVEEDS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ +G+ + +A +Y R++I RAI + VD + + +LD +PDPDL
Sbjct: 121 KRCSGITVCMALDYGGRNDIVRAINKVL------KAGLKSVDETTFSSFLDLDGIPDPDL 174
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GEKR+S+FLLW +AYSE F YWPDF + A+ Y+ R R+FG +
Sbjct: 175 LIRTAGEKRISNFLLWNLAYSELYFTDTYWPDFDKTELLKAIENYSRRVRKFGAV 229
>gi|16126162|ref|NP_420726.1| undecaprenyl diphosphate synthase [Caulobacter crescentus CB15]
gi|221234933|ref|YP_002517369.1| undecaprenyl pyrophosphate synthetase [Caulobacter crescentus
NA1000]
gi|42559870|sp|Q9A707|UPPS_CAUCR RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|13423372|gb|AAK23894.1| undecaprenyl diphosphate synthase [Caulobacter crescentus CB15]
gi|220964105|gb|ACL95461.1| undecaprenyl pyrophosphate synthetase [Caulobacter crescentus
NA1000]
Length = 259
Score = 276 bits (705), Expect = 3e-72, Method: Composition-based stats.
Identities = 95/229 (41%), Positives = 138/229 (60%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA RG+PR GHR G+ V A + LT+F FS NW RP
Sbjct: 24 HVAIIMDGNGRWAKQRGMPRVLGHRAGVNALKRTVEGAQSQNVGVLTVFGFSTENWSRPP 83
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+SEL+ L+K++++ L K ++VR+IG R L DI V++ AE +T N+ L
Sbjct: 84 QEVSELMGLLKAYVESDLERLAKAGVRVRIIGRRTGLSPDIAEVIERAERRTAQNSEFVL 143
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+AFNY + +I+ A + + +E G + D++ ++L T+ P PDLI+RT GE+
Sbjct: 144 QVAFNYGGQADITDAARAFAERVERGEAKASDLNEKTFEQFLSTASAPPPDLIVRTSGER 203
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
R+S+FLLW AY+E VF WPD+ E A+ +Y RDRR+GG++
Sbjct: 204 RISNFLLWDCAYAELVFQDVLWPDYGPEALAAAIAEYRGRDRRYGGVAA 252
>gi|320102516|ref|YP_004178107.1| Undecaprenyl pyrophosphate synthetase [Isosphaera pallida ATCC
43644]
gi|319749798|gb|ADV61558.1| Undecaprenyl pyrophosphate synthetase [Isosphaera pallida ATCC
43644]
Length = 305
Score = 276 bits (705), Expect = 3e-72, Method: Composition-based stats.
Identities = 95/235 (40%), Positives = 135/235 (57%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ S P HI IIMDGNGRWA RGLPR GHR+G+ +V +G+ LT++ S
Sbjct: 15 LDPSQLPRHIAIIMDGNGRWAQRRGLPRVMGHRRGVASVRAVVEEGCRLGLDQLTLYCLS 74
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
+ NW+RP E+ L+KL + FL L + I++ +IG+R L +L L + + T
Sbjct: 75 VENWKRPAREVQALMKLFRRFLITEREELARQRIRLTMIGDRQGLPSAVLDELDKTLELT 134
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N GL L +A NY R EI A + + + +E G + ++D++ L T + DPDL
Sbjct: 135 AANEGLTLCLAVNYGGRQEIVEAARRLARAVEQGRLAPEEIDAAQFEGQLFTRGMRDPDL 194
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE R+S+FLLWQ++Y+E P WPDF + AL Y R R+FGGL
Sbjct: 195 LIRTAGEMRVSNFLLWQMSYAELHVTPTLWPDFRADDLDRALVDYARRQRKFGGL 249
>gi|313888242|ref|ZP_07821913.1| di-trans,poly-cis-decaprenylcistransferase [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312845645|gb|EFR33035.1| di-trans,poly-cis-decaprenylcistransferase [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 241
Score = 276 bits (705), Expect = 3e-72, Method: Composition-based stats.
Identities = 101/237 (42%), Positives = 151/237 (63%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ S+ P HIGIIMDGNGRWA R +PR GH++G E EIV AA ++ +K+LT++A
Sbjct: 5 EQLDLSNIPKHIGIIMDGNGRWAKNRKMPRTFGHKEGSERVIEIVEAAYKINVKSLTLYA 64
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW+RP EIS+L+ L+ ++K +KKNNI+++V+G+ + I+ ++ A
Sbjct: 65 FSTENWKRPEEEISKLMDLLAFYIKSQLEKIKKNNIRIKVLGDYKVFPNKIVKLIDAALQ 124
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
+T+ N + L I NY + EI RA K I +D+ +G++ ++++ YL T D
Sbjct: 125 ETKSNDKMILNIGLNYGGQSEIVRASKMICEDLIAGNISLDEINTESFKDYLYTRGQEDL 184
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DL+IR GE R+S+FLL+Q+AYSEF F WPDF E F+ A+ + R+RR+GGL
Sbjct: 185 DLLIRPSGELRVSNFLLYQLAYSEFYFSNILWPDFHEEEFYKAICDFQNRNRRYGGL 241
>gi|295088111|emb|CBK69634.1| Undecaprenyl pyrophosphate synthetase [Bacteroides xylanisolvens
XB1A]
Length = 225
Score = 276 bits (705), Expect = 3e-72, Method: Composition-based stats.
Identities = 97/225 (43%), Positives = 142/225 (63%), Gaps = 2/225 (0%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA RG R GHR G E I AA +GIK LT++ FS NW RP+ EI+
Sbjct: 1 MDGNGRWAKQRGEERTYGHRAGAETVQNITEDAARLGIKYLTLYTFSTENWNRPLDEIAA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ L+ +++ +L KNNI+ VIG+ L ++ L ++T N+G+ + +A +
Sbjct: 61 LMNLLLESIEEE--TLMKNNIRFNVIGDFKKLPVEVQKSLTSCIERTSKNSGMYMVLALS 118
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
YSSR EI+ A++ I +++G + + I+ +LDT+ +PDPDL+IRTGGE RLS++
Sbjct: 119 YSSRWEITEAVRQIATQVKTGEISPEQITDECISSHLDTNFMPDPDLLIRTGGEIRLSNY 178
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
LLWQ AYSE F +WPDF +E + A+ +Y R+RRFG S++
Sbjct: 179 LLWQCAYSELYFCDTFWPDFDKEELYKAIWEYQQRERRFGKTSEQ 223
>gi|239501623|ref|ZP_04660933.1| di-trans,poly-cis-decaprenylcistransferase [Acinetobacter baumannii
AB900]
Length = 250
Score = 276 bits (705), Expect = 3e-72, Method: Composition-based stats.
Identities = 92/233 (39%), Positives = 143/233 (61%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IIMDGN R+A + + GHR+G V + IV + G++ LT+FAFS NW
Sbjct: 9 LPQHVAIIMDGNNRFAKKNQMQKGDGHREGKNVLDPIVEHCVKTGVRALTVFAFSSENWN 68
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ L+KL++ + + +KK NI +R IG+R L ++ ++++AE QT +
Sbjct: 69 RPQYEVDLLMKLLEETIHEQIPRMKKFNIALRFIGDRSRLPSHLVTLMEDAEQQTAHHDA 128
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ L IA +Y +I+ A K + Q + G + + ++ L KY+ +D+P DL+IRTG
Sbjct: 129 MTLTIAVSYGGMWDIANAAKQVAQAVSCGEIDADQINVDLFEKYVSLNDLPAVDLLIRTG 188
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
G+ R+S+FLLWQ AY+E F WP+F+ E F HALN ++ R+RRFG S++
Sbjct: 189 GDFRISNFLLWQAAYAELYFTDTLWPEFTVEEFDHALNVFSGRERRFGKTSEQ 241
>gi|221198318|ref|ZP_03571364.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
multivorans CGD2M]
gi|221208257|ref|ZP_03581261.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
multivorans CGD2]
gi|221215461|ref|ZP_03588425.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
multivorans CGD1]
gi|221164645|gb|EED97127.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
multivorans CGD1]
gi|221171905|gb|EEE04348.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
multivorans CGD2]
gi|221182250|gb|EEE14651.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
multivorans CGD2M]
Length = 251
Score = 276 bits (705), Expect = 3e-72, Method: Composition-based stats.
Identities = 101/233 (43%), Positives = 138/233 (59%), Gaps = 1/233 (0%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI IIMDGNGRWA R LPR AGH +G++ +V A G++ LT+FAFS NWR
Sbjct: 7 VPRHIAIIMDGNGRWATERRLPRVAGHTRGVDAVRAVVEGCARAGVEYLTLFAFSSENWR 66
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+S L++L + L++ L N I++RV+G+ + I +++ AE +T NT
Sbjct: 67 RPSDEVSFLMRLFITALEREIGKLHANGIRLRVVGDLERFEPRIRELIRRAETKTARNTR 126
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L IA NY R +I +A K + + V A +L + P+PDL IRTG
Sbjct: 127 LTLTIAANYGGRWDILQATKKLVEQAAREGREVE-VTEESFAPHLAMAYAPEPDLFIRTG 185
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+R+S+FLLWQ+AY+EF F +YWPDF AL Y R+RRFG S +
Sbjct: 186 GEQRVSNFLLWQLAYAEFYFTNKYWPDFDGAALAEALASYTERERRFGRTSAQ 238
>gi|300691600|ref|YP_003752595.1| undecaprenyl pyrophosphate synthetase (di-trans,
poly-cis-decaprenylcistransferase) [Ralstonia
solanacearum PSI07]
gi|299078660|emb|CBJ51318.1| undecaprenyl pyrophosphate synthetase (di-trans,
poly-cis-decaprenylcistransferase) [Ralstonia
solanacearum PSI07]
Length = 258
Score = 276 bits (705), Expect = 3e-72, Method: Composition-based stats.
Identities = 98/232 (42%), Positives = 139/232 (59%), Gaps = 2/232 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA R LPR AGH +G++ V AA G++ LT+FAFS NWRR
Sbjct: 16 PRHVAIIMDGNGRWATERHLPRMAGHSRGLDAVRAAVEAAGNRGVRYLTLFAFSSENWRR 75
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L+KL + L++ L + I++RV+G+ + I +++EAE +T N+GL
Sbjct: 76 PAEEVSFLMKLFMTALRREVSKLHDSGIRLRVVGDLGAFSPRIQLLIREAEAKTAANSGL 135
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ IA NY R +I +A++ + D + + ++ YL + +PDL IRTGG
Sbjct: 136 TVTIAANYGGRWDILQAMRALVAD--QPDIAPEAITEEALSPYLSLAYASEPDLFIRTGG 193
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
E+R+S+FLLWQ+AYSE F YWPDF A Y R+RRFG S +
Sbjct: 194 EQRISNFLLWQLAYSELYFTERYWPDFDAAEMDRAFAWYRNRERRFGRTSAQ 245
>gi|307247417|ref|ZP_07529464.1| Undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|307256460|ref|ZP_07538242.1| Undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|307258658|ref|ZP_07540393.1| Undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306856114|gb|EFM88270.1| Undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|306865090|gb|EFM96991.1| Undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306867315|gb|EFM99168.1| Undecaprenyl pyrophosphate synthetase [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
Length = 222
Score = 276 bits (705), Expect = 3e-72, Method: Composition-based stats.
Identities = 95/221 (42%), Positives = 134/221 (60%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA +G R GH+ G++ V+ AA+ GIK LT++AFS NW RP +E+S
Sbjct: 1 MDGNGRWAKQQGKLRVFGHQNGVKAVRSAVSFAAKHGIKVLTLYAFSSENWSRPEAEVSA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ L L L KNNI++ +IGN+ + + + + E+E T NTGL L IA N
Sbjct: 61 LMALFMRALDSEVKKLHKNNIRLNIIGNKSAFSESLQKRIAESEKLTENNTGLILNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y S +I++A + + ++ G + D+ + L T P DL+IRT GE+R+S+F
Sbjct: 121 YGSHWDITQAAQQLAIKVKLGEITVSDITPERLQNALVTGTQPLVDLLIRTSGEQRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
LLWQ+AY+E VF P WPDF+ + F A+ Y RDRRFGG
Sbjct: 181 LLWQIAYAELVFSPVLWPDFNDDSFSEAIIAYQQRDRRFGG 221
>gi|260220939|emb|CBA29009.1| Undecaprenyl pyrophosphate synthetase [Curvibacter putative
symbiont of Hydra magnipapillata]
Length = 235
Score = 276 bits (705), Expect = 3e-72, Method: Composition-based stats.
Identities = 102/242 (42%), Positives = 141/242 (58%), Gaps = 9/242 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M AS+ S P H+ I+MDGNGRWA+ R LPR AGH++G++ IV A I LT+
Sbjct: 1 MSASVSPS--PLHVAIVMDGNGRWASKRFLPRLAGHKQGVDTLKRIVRACPPRNIATLTV 58
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW RP E+S L+ L+ L + LK+ +++R +G+R L + + L A
Sbjct: 59 FAFSSENWNRPADEVSGLMDLLAGALAREVSQLKQEGVRLRFVGSRSGLSEKVRQGLHLA 118
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E +T NTGL L + FNY R +I +A + + D+ ++ + S
Sbjct: 119 ELETSSNTGLTLNVCFNYGGRWDIVQAARALA-------ERGEDITEDSLSSAMALSPSA 171
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL IRTGGE R+S+FLLWQ AY+EF F P WPDFS AL ++N R+RRFG S
Sbjct: 172 DPDLFIRTGGEYRISNFLLWQSAYAEFFFSPVLWPDFSEIDLDTALTEFNSRERRFGKTS 231
Query: 241 KK 242
++
Sbjct: 232 EQ 233
>gi|116670771|ref|YP_831704.1| undecaprenyl pyrophosphate synthetase [Arthrobacter sp. FB24]
gi|116610880|gb|ABK03604.1| Undecaprenyl pyrophosphate synthetase [Arthrobacter sp. FB24]
Length = 286
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 99/235 (42%), Positives = 142/235 (60%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S+ + P H+ I+MDGNGRWA RGLPR GH+ G ++VA A E+GIK +T++AF
Sbjct: 31 SIPAEFIPQHVAIVMDGNGRWANQRGLPRIEGHKAGEPALLDVVAGAIELGIKYVTVYAF 90
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRR E+ L+ K L++ L + +++R G R L ++ L+EAE+
Sbjct: 91 STENWRRSPEEVRFLMGFNKDVLRRQRNQLDEWGVRIRWSGRRPRLWGSVIRELEEAEEY 150
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
TR N+ L + NY R EI+ A+ I +D+ +G + + I KYLD D+PD D
Sbjct: 151 TRGNSTCTLTMCVNYGGRAEIADAVSAIAEDVAAGRLKPGSITERTIQKYLDEPDLPDVD 210
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R+ GE+RLS+F+LWQ AY+EFVF+ WPD R + A+ Y RDRR+GG
Sbjct: 211 LFLRSSGEQRLSNFMLWQSAYAEFVFMDTLWPDVDRRTLWDAVEIYAGRDRRYGG 265
>gi|300870156|ref|YP_003785027.1| undecaprenyl pyrophosphate synthetase [Brachyspira pilosicoli
95/1000]
gi|300687855|gb|ADK30526.1| undecaprenyl pyrophosphate synthetase [Brachyspira pilosicoli
95/1000]
Length = 241
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 108/235 (45%), Positives = 143/235 (60%), Gaps = 3/235 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+ P H+ IIMDGNGRWA AR R GHR G E IV A E+ IK LT++AFS N
Sbjct: 7 NKVPSHVAIIMDGNGRWAKARNKSRSFGHRAGSENVINIVEACCELNIKYLTLYAFSTEN 66
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR-- 125
W+RP E L KL+K F KK L NNI V+ IG+ D + ++E E +T
Sbjct: 67 WKRPEEEKKALFKLLKEFYKKEIKRLISNNILVKHIGDISKFPKDTIETIEETEKETLEK 126
Query: 126 -LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N L + +A NY RDE+ AIKN++ D+ S + D+D + I YL T D+PDPD
Sbjct: 127 CKNPILTVVLALNYGFRDELKTAIKNMYSDVLSNKINIEDIDENSIGNYLYTKDIPDPDF 186
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE RLS+FL++Q +YSE F WPDFS++ F A+ +Y+ R+RR+GGL
Sbjct: 187 VIRTSGEHRLSNFLMYQASYSELYFTDILWPDFSKDNFKKAIEEYSNRNRRYGGL 241
>gi|33596178|ref|NP_883821.1| undecaprenyl pyrophosphate synthetase [Bordetella parapertussis
12822]
gi|33601586|ref|NP_889146.1| undecaprenyl pyrophosphate synthetase [Bordetella bronchiseptica
RB50]
gi|33573181|emb|CAE36833.1| undecaprenyl pyrophosphate synthetase [Bordetella parapertussis]
gi|33576022|emb|CAE33102.1| undecaprenyl pyrophosphate synthetase [Bordetella bronchiseptica
RB50]
Length = 297
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 90/236 (38%), Positives = 143/236 (60%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ P H+ IIMDGNGRWA R LPR AGH KG+ +V A G++ LT+FAFS
Sbjct: 55 TGDIPRHVAIIMDGNGRWATRRHLPRTAGHAKGVHAVRRVVEACGRRGVRYLTLFAFSSE 114
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+S L++L L++ L+ +++ V+G+ + + + ++ +A+++T
Sbjct: 115 NWRRPADEVSLLMRLFVQALEREVDKLQDQGVRLHVVGDLSAFEPKLQELIAQAQERTEH 174
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N L+L +A NY R +I +A + + + + +D + +A++L + P+PDL I
Sbjct: 175 NDRLHLTVAANYGGRWDILQATRAMLRADPGLAQDPDRIDEARLAEHLSMAWAPEPDLFI 234
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE+R+S+FL+WQ+AY+EF F ++WPDF + A Y R+RRFG S +
Sbjct: 235 RTGGEQRISNFLVWQLAYAEFYFTEQFWPDFGADELDAAFEWYRTRERRFGRTSAQ 290
>gi|298245132|ref|ZP_06968938.1| undecaprenyl diphosphate synthase [Ktedonobacter racemifer DSM
44963]
gi|297552613|gb|EFH86478.1| undecaprenyl diphosphate synthase [Ktedonobacter racemifer DSM
44963]
Length = 261
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 96/238 (40%), Positives = 138/238 (57%), Gaps = 4/238 (1%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
VA+ S SP HI IIMDGNGRWA R LPR AGH+ G+ +V AA+ I+ L+++
Sbjct: 23 VAADQSQSPVRHIAIIMDGNGRWATRRHLPRLAGHKAGVSALRRVVECAADENIEMLSVY 82
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+ L++L ++ L ++ +++R +G L DI ++E+
Sbjct: 83 AFSTENWHRPRIEVDGLMRLFWETIRSDLEKLHRDGVRLRHLGRLYDLAPDIQQAVRESM 142
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
D T+ N + L + FNY R E+ A++ I D + +I+ YL T D+PD
Sbjct: 143 DLTKDNKRIGLNVCFNYGGRAELVDAVRQIIAD----GRQPETISEEMISSYLYTRDLPD 198
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDL+IRT GE R+S+FL+WQ AYSE+ P WPDF RE A+ + R R+FG +
Sbjct: 199 PDLVIRTAGEMRVSNFLIWQSAYSEYYATPTLWPDFGREDLLEAVQSFQQRSRKFGRV 256
>gi|325295075|ref|YP_004281589.1| Undecaprenyl pyrophosphate synthase [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065523|gb|ADY73530.1| Undecaprenyl pyrophosphate synthase [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 227
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 95/232 (40%), Positives = 137/232 (59%), Gaps = 6/232 (2%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P H+GIIMDGNGRWA RGLPR GHR+G +V EIV AA+++GIK L+++AFS NW
Sbjct: 2 NIPVHVGIIMDGNGRWARKRGLPRVEGHREGAKVTEEIVIAASKLGIKYLSLYAFSTENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP E++ L L+ ++K NN++ R +G L D + KE E++T
Sbjct: 62 KRPKEEVNFLFHLMYEYVKNKLSLFLDNNVRFRAMGRLWELPDYLQEGFKEIEEKTLHCD 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
G+ A NY R EI A+ + E ++ ++ KYL ++P+ DL+IRT
Sbjct: 122 GMVAVFAVNYGGRQEILDAVNRAIKAGEK------EITEEILRKYLYIPELPNLDLLIRT 175
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
GE R+S+FL+W AY+E F WPDF+ E F A+ + R+RRFGG+
Sbjct: 176 SGELRISNFLIWHSAYTELWFTKTLWPDFTEEEFKKAIEDFKKRERRFGGIK 227
>gi|188581298|ref|YP_001924743.1| undecaprenyl diphosphate synthase [Methylobacterium populi BJ001]
gi|179344796|gb|ACB80208.1| undecaprenyl diphosphate synthase [Methylobacterium populi BJ001]
Length = 259
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 125/235 (53%), Positives = 159/235 (67%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ IIMDGNGRWAA+RGLPR GHR+G+E V +A +GI LTI++FS NW
Sbjct: 24 PAPRHVAIIMDGNGRWAASRGLPRFEGHRRGVEAVRRAVRSAITLGIHYLTIYSFSSENW 83
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RRP SEISEL+ L+K F++ L NN++VRVIG+R L DI +L EAE +TR NT
Sbjct: 84 RRPPSEISELMGLLKLFVRSDLADLHANNVRVRVIGDRADLSGDIAGLLDEAEARTRANT 143
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL L +AFNY R EI RA++ I + G + D+D I + LDT+ +PDPDL+IRT
Sbjct: 144 GLTLVVAFNYGGRQEILRAVRRIAAAVAEGRLRPEDIDLPTITEALDTAGIPDPDLVIRT 203
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
GE RLS+FL WQ AY+E+V P +WPDF F AL++Y+ RDRRFGGLS
Sbjct: 204 SGEHRLSNFLTWQTAYAEYVIEPGFWPDFDHAAFLAALDEYHRRDRRFGGLSAGA 258
>gi|325963336|ref|YP_004241242.1| undecaprenyl pyrophosphate synthetase [Arthrobacter
phenanthrenivorans Sphe3]
gi|323469423|gb|ADX73108.1| Undecaprenyl pyrophosphate synthetase [Arthrobacter
phenanthrenivorans Sphe3]
Length = 275
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 95/235 (40%), Positives = 141/235 (60%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ + P H+ I+MDGNGRWA RGLPR GH+ G +++A A E+GI+ ++++AF
Sbjct: 31 AIPAEFIPRHVAIVMDGNGRWANQRGLPRIEGHKAGEPALLDVMAGAIELGIEYVSVYAF 90
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRR E+ L+ K L++ L + ++VR G R L ++ L+EAE+
Sbjct: 91 STENWRRSPEEVRFLMGFNKDVLRRQRNQLDEWGVRVRWSGRRPRLWGSVIRELEEAEEF 150
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T N+ L + NY R EI+ A+ I ++ +G + + I KYLD D+PD D
Sbjct: 151 TAGNSTCTLTMCVNYGGRAEITDAVSAIAAEVAAGRLKPGAITERTIQKYLDEPDLPDVD 210
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R+ GE+RLS+FLLWQ AY+EFVF+ WPD R + A+ +Y RDRR+GG
Sbjct: 211 LFLRSSGEQRLSNFLLWQSAYAEFVFMDTLWPDVDRRTLWAAVEEYAQRDRRYGG 265
>gi|190573498|ref|YP_001971343.1| undecaprenyl pyrophosphate synthase [Stenotrophomonas maltophilia
K279a]
gi|190011420|emb|CAQ45038.1| putative undecaprenyl pyrophosphate synthetase [Stenotrophomonas
maltophilia K279a]
Length = 255
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 97/237 (40%), Positives = 137/237 (57%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ ++ P H+ IIMDGNGRWA R PR GHR G N + E+GI LT+FAFS
Sbjct: 8 LPATLPRHVAIIMDGNGRWAQQRRRPRVIGHRAGARAVNRTIERCLELGIPALTLFAFSS 67
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+ L+KL L + L + ++VR IG R ++ ++ AE +T
Sbjct: 68 ENWGRPQEEVDALMKLFLGALDREVDELHRRGVRVRFIGERERFGAGLVSRMQLAEQRTA 127
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
NT L L IA +Y R +I+RA + + ++ +G + +D SL+ + +D+P PDL
Sbjct: 128 DNTTLTLSIAASYGGRQDIARAARALAAEVAAGRLLPEQIDESLLGSQVALADLPPPDLF 187
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTGG+ R+S+FLLWQ+AY+E F WPDF L AL+ Y R+RRFG S +
Sbjct: 188 IRTGGDTRISNFLLWQLAYTELWFTEALWPDFDAALLQQALDAYGSRERRFGLTSAQ 244
>gi|107028805|ref|YP_625900.1| undecaprenyl diphosphate synthase [Burkholderia cenocepacia AU
1054]
gi|116690036|ref|YP_835659.1| undecaprenyl diphosphate synthase [Burkholderia cenocepacia HI2424]
gi|170733371|ref|YP_001765318.1| undecaprenyl diphosphate synthase [Burkholderia cenocepacia MC0-3]
gi|206560449|ref|YP_002231213.1| undecaprenyl pyrophosphate synthetase [Burkholderia cenocepacia
J2315]
gi|254247887|ref|ZP_04941208.1| Di-trans-poly-cis-decaprenylcistransferase [Burkholderia
cenocepacia PC184]
gi|105897969|gb|ABF80927.1| Undecaprenyl pyrophosphate synthetase [Burkholderia cenocepacia AU
1054]
gi|116648125|gb|ABK08766.1| Undecaprenyl pyrophosphate synthetase [Burkholderia cenocepacia
HI2424]
gi|124872663|gb|EAY64379.1| Di-trans-poly-cis-decaprenylcistransferase [Burkholderia
cenocepacia PC184]
gi|169816613|gb|ACA91196.1| undecaprenyl diphosphate synthase [Burkholderia cenocepacia MC0-3]
gi|198036490|emb|CAR52387.1| undecaprenyl pyrophosphate synthetase [Burkholderia cenocepacia
J2315]
Length = 260
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 99/233 (42%), Positives = 137/233 (58%), Gaps = 1/233 (0%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI IIMDGNGRWA R LPR AGH +G++ +V A G++ LT+FAFS NWR
Sbjct: 16 VPRHIAIIMDGNGRWATERRLPRVAGHTRGVDAVRAVVEGCARAGVEYLTLFAFSSENWR 75
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+S L++L + L++ L N I++RV+G+ + I +++ AE +T NT
Sbjct: 76 RPNDEVSFLMRLFITALEREVGKLHANGIRLRVVGDLDRFEPRIRELIRRAETKTARNTR 135
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L IA NY R +I +A + +V A +L + P+PDL IRTG
Sbjct: 136 LTLTIAANYGGRWDILQAT-KKLVEQAVREGREVEVTEDAFAPHLAMAYAPEPDLFIRTG 194
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+R+S+FLLWQ+AY+EF F +YWPDF A+ Y R+RRFG S +
Sbjct: 195 GEQRVSNFLLWQLAYAEFYFTDKYWPDFDGAALADAMASYTERERRFGRTSAQ 247
>gi|116629462|ref|YP_814634.1| undecaprenyl pyrophosphate synthase [Lactobacillus gasseri ATCC
33323]
gi|311110890|ref|ZP_07712287.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus gasseri
MV-22]
gi|116095044|gb|ABJ60196.1| Undecaprenyl pyrophosphate synthetase [Lactobacillus gasseri ATCC
33323]
gi|311066044|gb|EFQ46384.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus gasseri
MV-22]
Length = 239
Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats.
Identities = 99/231 (42%), Positives = 144/231 (62%), Gaps = 3/231 (1%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+H+ IIMDGNGRWA R L R GHR G++ I AA E+GIK LT++AFS NW RP
Sbjct: 9 NHLAIIMDGNGRWAKKRNLLRFVGHRHGMDNIRNIALAANEMGIKVLTLYAFSTENWARP 68
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E++ L++L F K L +NN++V ++G L + V ++A +T NTG+
Sbjct: 69 TDEVNYLMRLPIDFFDKFMPELMENNVRVNIMGFLDELPEKTYLVTQKAMAETANNTGMV 128
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP---DPDLIIRT 188
L AFNY SR EI+ ++ I + +++G + D+D +++ +L T + DPDL+IRT
Sbjct: 129 LNFAFNYGSRREITAGVQEIARQVKAGKINPSDIDEKMVSDHLLTHSLTPYDDPDLLIRT 188
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE+RLS+FLLWQ+AY+EF F + WPDF + + + Y R+RRFG L
Sbjct: 189 SGEERLSNFLLWQMAYTEFSFSNKLWPDFDKNDLENLVKDYYGRNRRFGKL 239
>gi|78066794|ref|YP_369563.1| undecaprenyl pyrophosphate synthetase [Burkholderia sp. 383]
gi|77967539|gb|ABB08919.1| Undecaprenyl pyrophosphate synthetase [Burkholderia sp. 383]
Length = 260
Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats.
Identities = 99/233 (42%), Positives = 137/233 (58%), Gaps = 1/233 (0%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI IIMDGNGRWA R LPR AGH +G++ +V A G++ LT+FAFS NWR
Sbjct: 16 VPRHIAIIMDGNGRWATERRLPRVAGHTRGVDAVRAVVEGCARAGVEYLTLFAFSSENWR 75
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+S L++L + L++ L N I++RV+G+ + I +++ AE +T NT
Sbjct: 76 RPNDEVSFLMRLFITALEREVGKLHANGIRLRVVGDLDRFEPRIRELIRRAETKTARNTR 135
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L IA NY R +I +A + +V A +L + P+PDL IRTG
Sbjct: 136 LTLTIAANYGGRWDILQAT-KKLIEQAVREGREVEVTEDAFAPHLAMAYAPEPDLFIRTG 194
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+R+S+FLLWQ+AY+EF F +YWPDF A+ Y R+RRFG S +
Sbjct: 195 GEQRVSNFLLWQLAYAEFYFTDKYWPDFDGAALADAMASYTERERRFGRTSAQ 247
>gi|313904229|ref|ZP_07837608.1| undecaprenyl diphosphate synthase [Eubacterium cellulosolvens 6]
gi|313471031|gb|EFR66354.1| undecaprenyl diphosphate synthase [Eubacterium cellulosolvens 6]
Length = 241
Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats.
Identities = 101/241 (41%), Positives = 147/241 (60%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + P HI II+DGNGRWA +G+PR GH G + ++ E+GIK LT+
Sbjct: 1 MNEDIQGLKLPQHIAIILDGNGRWAKRKGMPRSYGHIVGCDNLEKMCDMMCEMGIKYLTV 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+R E+ L+ L + +LK+ KKN ++V++IG+ +LD+DI +KE
Sbjct: 61 YAFSTENWKRSPDEVRTLMNLFRKYLKRCMRKAKKNEMRVKIIGDPSALDEDIQESIKEL 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E ++ + IA NY RDEI RA+ + D+ G + + + +YLDT+ +P
Sbjct: 121 EGMSKDYDKMFFQIALNYGGRDEIERAVTKLADDVREGKIPEGRITGEVFEQYLDTAGMP 180
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GE R+S+FLLWQ+AY+EF F WPDF+R+ A+ +YN RDRRFG
Sbjct: 181 DPDLMIRTSGELRISNFLLWQLAYTEFYFTDVAWPDFNRKELIKAIEKYNGRDRRFGDAK 240
Query: 241 K 241
+
Sbjct: 241 E 241
>gi|115441143|ref|NP_001044851.1| Os01g0857200 [Oryza sativa Japonica Group]
gi|15290008|dbj|BAB63702.1| putative undecaprenyl pyrophosphate synthetase [Oryza sativa
Japonica Group]
gi|56785360|dbj|BAD82318.1| putative undecaprenyl pyrophosphate synthetase [Oryza sativa
Japonica Group]
gi|113534382|dbj|BAF06765.1| Os01g0857200 [Oryza sativa Japonica Group]
gi|125572686|gb|EAZ14201.1| hypothetical protein OsJ_04125 [Oryza sativa Japonica Group]
Length = 295
Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats.
Identities = 99/241 (41%), Positives = 141/241 (58%), Gaps = 4/241 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + S P H+ ++MDGN RWA ARGLP AGH G E V + GI+ LT
Sbjct: 51 LPGCLRAESLPRHVAVVMDGNARWARARGLPSAAGHEAGRRALEETVRLSRAWGIRALTA 110
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW RP E+ L++L + + + I++RVIG+ L + + +EA
Sbjct: 111 FAFSNENWSRPKVEVDFLMRLFERVIHDSVAEFLREGIRLRVIGDSSRLPVSLQKIAREA 170
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS--- 177
E+ TR N+ L+L +A +YS R +I +A + + Q ++S ++ + D+D +L A L+TS
Sbjct: 171 EETTRNNSQLDLTLAISYSGRRDIVQACRKLAQKVQSKALAAEDIDEALFADELETSCAA 230
Query: 178 -DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
+ P PDL+IRT GE RLS+FLLWQ AYSE F WPDF + AL + RDRRF
Sbjct: 231 DEFPYPDLLIRTSGELRLSNFLLWQSAYSELFFTNTLWPDFGEADYLEALCSFQSRDRRF 290
Query: 237 G 237
G
Sbjct: 291 G 291
>gi|294629248|ref|ZP_06707808.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. e14]
gi|292832581|gb|EFF90930.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. e14]
Length = 279
Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats.
Identities = 90/235 (38%), Positives = 138/235 (58%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P+H+ I+MDGNGRWA RGLPR GH+ G E +++ + E+G++N++++AF
Sbjct: 28 KLPGELVPEHVAIVMDGNGRWAKERGLPRTEGHKVGAERVLDVLQGSIEIGVRNISLYAF 87
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + F+++ L + I+VR +G L + L+ A++Q
Sbjct: 88 STENWKRSPDEVRFLMNFNRDFIRRTRDQLDELGIRVRWVGRMPRLWKSVAKELQVAQEQ 147
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N L L+ NY R E++ A K + +D+ +G + V I KYL D+PD D
Sbjct: 148 TKGNDLLTLYFCMNYGGRAELADAAKAMAEDVAAGRLDPSKVSEKTIQKYLYYPDMPDVD 207
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R GE+R S++LLWQ AY+E VF WPDF R + A ++ RDRRFGG
Sbjct: 208 LFLRPSGEQRTSNYLLWQSAYAEMVFQDVLWPDFDRRDLWRACLEFASRDRRFGG 262
>gi|297559707|ref|YP_003678681.1| undecaprenyl diphosphate synthase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296844155|gb|ADH66175.1| undecaprenyl diphosphate synthase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 273
Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats.
Identities = 85/235 (36%), Positives = 131/235 (55%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P H+ ++MDGNGRWA RGL R GH+ G +++ A E+G+ NL+ +AF
Sbjct: 28 ELPAQLVPRHVAVVMDGNGRWAKERGLARTEGHKAGESSLFDVIEGALEMGVANLSAYAF 87
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + +++ L ++V+ G L ++ L++AE+
Sbjct: 88 STENWKRSPDEVRFLMGFNRDTIRRRRDELHARGVRVKWAGRAGRLWKSVIRELQDAEEM 147
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
TR NT L L NY + EI A + + + +G + + +A++L DVP D
Sbjct: 148 TRDNTALTLQFCVNYGGQAEIVDAARELARRAAAGLLSPEKITEDTLAQHLYAPDVPPVD 207
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R+ GE+R S+FLLWQ AY+EFVF+ WPDF R + A Y RDRR+GG
Sbjct: 208 LFVRSSGEQRTSNFLLWQSAYAEFVFLDTLWPDFDRRDLWRACEIYASRDRRYGG 262
>gi|189485410|ref|YP_001956351.1| undecaprenyl pyrophosphate synthetase [uncultured Termite group 1
bacterium phylotype Rs-D17]
gi|170287369|dbj|BAG13890.1| undecaprenyl pyrophosphate synthetase [uncultured Termite group 1
bacterium phylotype Rs-D17]
Length = 224
Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats.
Identities = 99/230 (43%), Positives = 140/230 (60%), Gaps = 7/230 (3%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IIMDGNGRWA R LPR GH++G + +IV AA+ +GI+ LT++AFS NW+
Sbjct: 2 IPGHVAIIMDGNGRWAEKRSLPRTFGHKQGGKTVKKIVKAASNLGIRILTLYAFSTENWK 61
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP SEI EL LI F+K+ L IK+R++G+ ++I ++ A T NTG
Sbjct: 62 RPQSEIKELFSLIMQFIKEELIELNNC-IKLRILGDLSKFPENIRTEIENASKITSQNTG 120
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L IA NY +R E+ A + E +I+ +L T+ PDPDL+IRT
Sbjct: 121 LELNIALNYGARQELIHAFE------EMSKQNIKKPTEEIISSFLYTAGQPDPDLLIRTS 174
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE R+S+FLLWQ+AYSE + WPDF+++ A++++ R+R FGGL
Sbjct: 175 GEFRISNFLLWQIAYSEIYITDKLWPDFTQQDLETAVSEFQKRERHFGGL 224
>gi|168703609|ref|ZP_02735886.1| undecaprenyl pyrophosphate synthetase [Gemmata obscuriglobus UQM
2246]
Length = 257
Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats.
Identities = 96/239 (40%), Positives = 140/239 (58%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P HI IIMDGNGRWA +G R GH +G + I +GI LT++ S
Sbjct: 17 LTPELLPRHIAIIMDGNGRWAQRQGKERADGHAQGAHSVDVITEECCRLGIGQLTLYCLS 76
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP EI L+ L+K +L +++ NI+ VIG R L D++L + E T
Sbjct: 77 SENWKRPKPEIDFLMALLKQYLLAEREKIQRQNIRFAVIGRRAGLPDEVLAEIDENVRLT 136
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
R NTGL L +A NY SR EI A++++ + + +G + ++D I+ L T +PDPDL
Sbjct: 137 RHNTGLTLCLAINYGSRGEIVDAVQSLARRVRAGELAPEEIDERAISGALYTGGMPDPDL 196
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
++RT GE R+S++LLWQ++Y+E P++WP+F L AL Y R+RRFGGL+
Sbjct: 197 LVRTAGEMRVSNYLLWQISYAELWVTPKFWPEFDPPLLHSALRDYARRERRFGGLNTDA 255
>gi|187478232|ref|YP_786256.1| undecaprenyl pyrophosphate synthase [Bordetella avium 197N]
gi|115422818|emb|CAJ49346.1| undecaprenyl pyrophosphate synthetase [Bordetella avium 197N]
Length = 250
Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats.
Identities = 97/236 (41%), Positives = 145/236 (61%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ + P H+ IIMDGNGRWA R LPR AGH KG+ +V A G++ LT+FAFS
Sbjct: 12 TGAIPQHVAIIMDGNGRWATRRHLPRTAGHAKGVRAVRRVVEACGRHGVRYLTLFAFSSE 71
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+S L++L L++ L++ +++ V+G+ + + + +++ A+D+TR
Sbjct: 72 NWRRPADEVSLLMRLFVQALEREVGKLQEQGVRLHVVGDLSAFEPRLQELIQAAQDRTRH 131
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N L+L IA NY R ++ +A + + Q D+D S +A+YL + P+PDL I
Sbjct: 132 NDRLHLTIAANYGGRWDVLQATRAMLQAEPDLVGRLQDIDESRMAQYLSMAWAPEPDLFI 191
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGGE+R+S+FL+WQ+AY+E F YWPDF E A + Y R+RRFG S +
Sbjct: 192 RTGGEQRISNFLIWQLAYTELYFSDAYWPDFGAEQLEAAFDWYRGRERRFGRTSAQ 247
>gi|319793979|ref|YP_004155619.1| undecaprenyl diphosphate synthase [Variovorax paradoxus EPS]
gi|315596442|gb|ADU37508.1| undecaprenyl diphosphate synthase [Variovorax paradoxus EPS]
Length = 239
Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats.
Identities = 91/234 (38%), Positives = 132/234 (56%), Gaps = 7/234 (2%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ ++MDGNGRWA R LPR AGH++G+E V A A+ G+ LT+FAFS NW
Sbjct: 7 PIPHHVAVVMDGNGRWATKRFLPRVAGHKQGVESLRRCVKACADRGVGVLTVFAFSSENW 66
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+S L+ L+ L + L ++ +++ +G R L ++ L AE+ T NT
Sbjct: 67 NRPPDEVSGLMSLMVGALAREVPRLSRDGVRLHFVGERGGLSAKLVAGLVSAEEATAHNT 126
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
L L I FNY R +I++A + + + + + + + VPDPDL IRT
Sbjct: 127 RLVLNICFNYGGRWDIAQAAAKLAEQGLP-------MTEMNMDRAMALAHVPDPDLFIRT 179
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GGE+RLS+FLLWQ AY+E F + WP+F A+ + R+RRFG S +
Sbjct: 180 GGEQRLSNFLLWQSAYAELFFSDKLWPEFDEAALDEAIAAFQGRERRFGQTSAQ 233
>gi|162450825|ref|YP_001613192.1| undecaprenyl pyrophosphate synthetase [Sorangium cellulosum 'So ce
56']
gi|161161407|emb|CAN92712.1| Undecaprenyl pyrophosphate synthetase [Sorangium cellulosum 'So ce
56']
Length = 246
Score = 275 bits (703), Expect = 5e-72, Method: Composition-based stats.
Identities = 95/238 (39%), Positives = 143/238 (60%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M SS+ P H+ II+DGNGRWAAARGLPR AGH+ G + V A + GI LT++AFS
Sbjct: 1 MTSSNLPKHVAIILDGNGRWAAARGLPRMAGHQHGAKAVRLSVRACRDRGIPYLTLYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
+ NW RP EI L+++ + F + L + I V+V+G+ + +++ + T
Sbjct: 61 VANWSRPKDEIDALMRICQEFAEGEHDELIRRGIAVQVVGDLEDIPTPTRRAMEKLVEDT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
T + L +A +Y R +++ A++ + +G V +++ + +L TS +PDPDL
Sbjct: 121 AGGTEMTLALALSYGGRRDMANAMRALAVRARAGLVIPEEINEKSLRNFLTTSSMPDPDL 180
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IIRTGGEKRLSDFLL++ AY+E F WPDF+ E F A+ Y+ R RR+G ++
Sbjct: 181 IIRTGGEKRLSDFLLFEAAYAELFFTDTLWPDFTEETFEEAVATYSRRQRRYGRTGEQ 238
>gi|210633127|ref|ZP_03297694.1| hypothetical protein COLSTE_01607 [Collinsella stercoris DSM 13279]
gi|210159281|gb|EEA90252.1| hypothetical protein COLSTE_01607 [Collinsella stercoris DSM 13279]
Length = 261
Score = 275 bits (703), Expect = 5e-72, Method: Composition-based stats.
Identities = 98/241 (40%), Positives = 146/241 (60%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + + P H+ IMDGNGRWA ARGL R GH+ GI +++ A +G+ L+ +
Sbjct: 21 LDDIDMARIPRHVSCIMDGNGRWATARGLGRGEGHKAGIVALQDVITACVRLGVDVLSAY 80
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP +E++ L+ L LK+ N++V +G+ L V +
Sbjct: 81 AFSTENWNRPQTEVNLLMHLFAKTFVDELPLLKRENVRVEFLGDISVLPKKTREVFEYGL 140
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+QT +TG+ L +A NY +R E++RA + + +++ +G + D+D S IA +L T+D+PD
Sbjct: 141 EQTSDHTGMTLALAVNYGARAELARAARLLAKEVAAGHLSPDDIDESAIADHLYTADLPD 200
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
P+L+IRT GE RLS++LLWQVAY+EF YWPDF R A+ + RDRRFGGLS
Sbjct: 201 PELVIRTSGEMRLSNYLLWQVAYAEFYLTDTYWPDFDRWGLLRAIAAFQGRDRRFGGLSA 260
Query: 242 K 242
+
Sbjct: 261 R 261
>gi|295839013|ref|ZP_06825946.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. SPB74]
gi|295827285|gb|EFG65329.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. SPB74]
Length = 280
Score = 275 bits (703), Expect = 5e-72, Method: Composition-based stats.
Identities = 89/235 (37%), Positives = 133/235 (56%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P H+ I+MDGNGRWA RGLPR GHR G V + + E+G+KNL+++AF
Sbjct: 28 QLPAELVPGHVAIVMDGNGRWAKERGLPRTEGHRVGEGVVMDALKGCLELGVKNLSLYAF 87
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + + + + + I++R G L ++ L+ A++Q
Sbjct: 88 STENWKRSPDEVRFLMNFNRDVIARRRDEMDELGIRIRWAGRMPKLWKSVVKELQIAQEQ 147
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T N L L+ NY R EI+ A + + +D+ +G + V + KYL D+PD D
Sbjct: 148 TTENDALTLYFCLNYGGRAEIADAARRLAEDVATGRLDPSKVSEKTVQKYLYYPDMPDVD 207
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R GE+R S+FLLWQ +Y+E V+ WPDF R + A +Y RDRRFGG
Sbjct: 208 LFLRPSGEQRTSNFLLWQSSYAEMVYQDVLWPDFDRRDLWRACVEYAKRDRRFGG 262
>gi|312196055|ref|YP_004016116.1| undecaprenyl diphosphate synthase [Frankia sp. EuI1c]
gi|311227391|gb|ADP80246.1| undecaprenyl diphosphate synthase [Frankia sp. EuI1c]
Length = 264
Score = 275 bits (703), Expect = 5e-72, Method: Composition-based stats.
Identities = 93/240 (38%), Positives = 142/240 (59%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ + P H+ I+MDGNGRWA RGLPR GH G + + V A E+GI+ ++++AF
Sbjct: 25 TIPAELVPQHVAIVMDGNGRWATLRGLPRTKGHEAGEDALFDCVEGAIELGIRWISVYAF 84
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E++ L++ + + + + VR G R L + ++ L++AE++
Sbjct: 85 STENWKRAPDEVAFLMRFVDGVFGRRIDDMDSLGVNVRWAGRRPRLWNSVIRRLEKAEER 144
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N + L + NY R EI+ A + QD+ G + +D A+YLD D+PD D
Sbjct: 145 TKNNDRITLAMCINYGGRAEIADAAALMAQDVRDGRLKPDKIDERTFARYLDEPDMPDVD 204
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
L+IRT GE+RLS+FLLWQ AY+EF F+ WPDF R + A +Y RDRR+GG+ +
Sbjct: 205 LLIRTSGEQRLSNFLLWQAAYAEFAFVDTLWPDFDRRDLWAACEEYARRDRRYGGVIARA 264
>gi|317406264|gb|EFV86508.1| undecaprenyl pyrophosphate synthetase [Achromobacter xylosoxidans
C54]
Length = 254
Score = 275 bits (703), Expect = 5e-72, Method: Composition-based stats.
Identities = 94/233 (40%), Positives = 142/233 (60%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P+H+ IIMDGNGRWA R LPR AGH KG++ +V A G++ LT+FAFS NWR
Sbjct: 15 IPEHVAIIMDGNGRWATRRLLPRTAGHAKGVQAVRRVVEACGRAGVRYLTLFAFSSENWR 74
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+S L++L L++ L++ +++ VIG+ + + + ++ A+ +T N
Sbjct: 75 RPAEEVSLLMRLFVQALEREVGKLEEQGVRLHVIGDLSAFEPRLQELIFAAQARTAHNDR 134
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L+L +A NY R +I +A + + + + VD +A++L S P+PDL IRTG
Sbjct: 135 LHLTVAANYGGRWDILQATRAMLAAEPALATQPELVDEERLARHLSMSWAPEPDLFIRTG 194
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+R+S+FL+WQ+AY+EF F YWPDF + A + Y R+RRFG S +
Sbjct: 195 GEQRISNFLIWQMAYAEFYFTDRYWPDFGADELREAFDWYRTRERRFGRTSAQ 247
>gi|71899405|ref|ZP_00681564.1| Di-trans-poly-cis-decaprenylcistransferase [Xylella fastidiosa
Ann-1]
gi|71730814|gb|EAO32886.1| Di-trans-poly-cis-decaprenylcistransferase [Xylella fastidiosa
Ann-1]
Length = 255
Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats.
Identities = 92/233 (39%), Positives = 136/233 (58%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI IIMDGNGRWA R PR AGHR G++ V E GIK LT+FAFS NW
Sbjct: 12 LPRHIAIIMDGNGRWAERRSQPRTAGHRAGVKAAMRTVDFCLEKGIKMLTLFAFSSENWN 71
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E++ L+++ +G L + ++VR IG R D ++ + +AE T N
Sbjct: 72 RPADEVNFLMEMSIKLFGRGIEELHRRGVQVRFIGERKRFDIALVEHMTKAEHLTANNQR 131
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L +A +Y R +I+ A + + QD+ +G + +D L+ +++ +D+P PD+ IRT
Sbjct: 132 LILSLAVSYGGRQDITMAARALAQDVAAGRLKPEQIDEDLLGQHMSLADLPPPDMFIRTS 191
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
G R+S+FLLWQ+AY+E F WP+F+ + AL+ Y R+RRFG + +
Sbjct: 192 GVIRISNFLLWQIAYTELWFTDVMWPEFNSTVLQQALDDYASRERRFGLTNAQ 244
>gi|293605061|ref|ZP_06687454.1| undecaprenyl diphosphate synthase [Achromobacter piechaudii ATCC
43553]
gi|292816563|gb|EFF75651.1| undecaprenyl diphosphate synthase [Achromobacter piechaudii ATCC
43553]
Length = 254
Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats.
Identities = 94/233 (40%), Positives = 140/233 (60%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P+H+ IIMDGNGRWA R LPR AGH KG++ +V A G++ LT+FAFS NWR
Sbjct: 15 IPEHVAIIMDGNGRWATRRLLPRTAGHAKGVQAVRRVVEACGRAGVRYLTLFAFSSENWR 74
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+S L++L L++ L + +++ VIG+ + + + +++ A+ +T N
Sbjct: 75 RPAEEVSLLMRLFVQALEREIGKLDEQGVRLHVIGDLSAFEPRLQELIQAAQARTAHNDR 134
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L+L +A NY R +I +A + + + VD +A++L S P+PDL IRTG
Sbjct: 135 LHLTVAANYGGRWDILQATRAMLAAEPDLAAHPERVDEERLARHLSMSWAPEPDLFIRTG 194
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+R+S+FL+WQ+AY+EF F YWPDF A + Y R+RRFG S +
Sbjct: 195 GEQRISNFLIWQMAYAEFYFTDRYWPDFGAAELQAAFDWYRTRERRFGRTSAQ 247
>gi|329934671|ref|ZP_08284712.1| undecaprenyl phosphate synthetase [Streptomyces griseoaurantiacus
M045]
gi|329305493|gb|EGG49349.1| undecaprenyl phosphate synthetase [Streptomyces griseoaurantiacus
M045]
Length = 284
Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats.
Identities = 88/235 (37%), Positives = 135/235 (57%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P H+ I+MDGNGRWA RGLPR GH+ G E +++ E+G+ ++++AF
Sbjct: 28 KLPGELIPKHVAIVMDGNGRWAKGRGLPRTEGHKVGAERVLDVLQGGIEMGVGAISLYAF 87
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + F++K L ++VR +G L + L+ A++Q
Sbjct: 88 STENWKRSPEEVRFLMNFNRDFIRKSRDQLDALGVRVRWVGRMPKLWRSVAKELQVAQEQ 147
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N L L+ NY R EI+ A + + +D+ +G + V+ +AKYL D+PD D
Sbjct: 148 TKDNDRLTLYFCMNYGGRAEIADAAQAMAEDVRAGRLEPSKVNEKTLAKYLYYPDMPDVD 207
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R GE+R S++L+WQ AY+E VF WPDF R + A ++ RDRRFGG
Sbjct: 208 LFLRPSGEQRTSNYLIWQSAYAEMVFQDVLWPDFDRRDLWRACLEFASRDRRFGG 262
>gi|295693143|ref|YP_003601753.1| undecaprenyl pyrophosphate synthetase [Lactobacillus crispatus ST1]
gi|295031249|emb|CBL50728.1| Undecaprenyl pyrophosphate synthetase [Lactobacillus crispatus ST1]
Length = 244
Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats.
Identities = 100/233 (42%), Positives = 144/233 (61%), Gaps = 3/233 (1%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+H+ IIMDGNGRWA R PR GHR+G++ I AA ++GIK LT++AFS NW RP
Sbjct: 9 NHLAIIMDGNGRWAKKRHRPRFVGHREGMDNVERITLAADKLGIKVLTLYAFSTENWARP 68
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E++ L+ L F K +L +NN+KV ++G L + +++ A +T NTGL
Sbjct: 69 KEEVAYLMNLPVRFFDKYMPTLMENNVKVNIMGYLDKLPEKTYRIVQRAMSETANNTGLI 128
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV---PDPDLIIRT 188
L AFNY SR EI+ A++ + IE+GS+ S ++ +I+ +L T + DPDL+IRT
Sbjct: 129 LNFAFNYGSRREITSAMQELGGMIEAGSLKSEEITEKMISDHLMTKNFGPYQDPDLLIRT 188
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
GE+R+S+FLLWQ+AYSE F + WPDF + Y R+RRFG + +
Sbjct: 189 SGEQRISNFLLWQLAYSELAFSEKNWPDFDENDLKKFVEDYKHRNRRFGKVDE 241
>gi|270307746|ref|YP_003329804.1| undecaprenyl diphosphate synthase [Dehalococcoides sp. VS]
gi|270153638|gb|ACZ61476.1| undecaprenyl diphosphate synthase [Dehalococcoides sp. VS]
Length = 236
Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats.
Identities = 99/234 (42%), Positives = 144/234 (61%), Gaps = 4/234 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
++++PP+HI IIMDGNGRWA RGL R GH+ G+E ++ +GIK +T+++FS
Sbjct: 7 INNTPPNHIAIIMDGNGRWAERRGLSRIDGHKAGLENARLVIRHLNSLGIKYVTLYSFST 66
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP +EI L LI + L +NN+++R +G+ L + L+ T
Sbjct: 67 ENWKRPDAEIKGLFGLINDVMSSYIPELVENNVRLRHLGHLDKLPAILRHKLEGVLSATS 126
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
NTGL L +AF+Y RDEI +A+K + +D + + + A+YL T+D+P+ DL+
Sbjct: 127 QNTGLTLCLAFDYGGRDEIIQAVKGLVKD----GIAVDKITEDVFARYLYTADIPEADLV 182
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRTGGE RLS+FL+WQ AYSE F WPDF + A++ +N R RRFGGL
Sbjct: 183 IRTGGEIRLSNFLIWQSAYSELYFSEVMWPDFGEKEIDKAISAFNQRQRRFGGL 236
>gi|295396950|ref|ZP_06807072.1| di-trans,poly-cis-decaprenylcistransferase [Aerococcus viridans
ATCC 11563]
gi|294974803|gb|EFG50508.1| di-trans,poly-cis-decaprenylcistransferase [Aerococcus viridans
ATCC 11563]
Length = 248
Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats.
Identities = 102/237 (43%), Positives = 149/237 (62%), Gaps = 3/237 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P+HI +IMDGNGRWA ARGL R GH +G++ +V AA ++G+K LT +AFS NW
Sbjct: 12 PIPNHIAVIMDGNGRWAQARGLKRTDGHSEGLKALKRVVIAAHKMGVKVLTAYAFSTENW 71
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP++E++ L+ L K + L NN++VR+ GN + ++ A D+T+ NT
Sbjct: 72 KRPITEVNYLMGLPKVLNDEILPDLIDNNVQVRMSGNFDKVPLGTKKYIQNAMDRTKDNT 131
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS---DVPDPDLI 185
GL L IAFNY SRDEI++A++NI + +G + D+ I+ L T+ + DPDL+
Sbjct: 132 GLILNIAFNYGSRDEITKAVQNIATSVANGDLKVKDISEDTISDNLYTAQLGEYADPDLL 191
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IR+ GE RLS++LLWQ+AYSE VF WPDF + + ++ R+RRFG + K
Sbjct: 192 IRSSGEVRLSNYLLWQLAYSEMVFTDTKWPDFDEAIMQECVGEFQRRNRRFGAIDTK 248
>gi|304414210|ref|ZP_07395578.1| undecaprenyl pyrophosphate synthase [Candidatus Regiella
insecticola LSR1]
gi|304283424|gb|EFL91820.1| undecaprenyl pyrophosphate synthase [Candidatus Regiella
insecticola LSR1]
Length = 256
Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats.
Identities = 90/234 (38%), Positives = 135/234 (57%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ P H+ IIMDGNGRWA + R GH+ GI+ V+ AA+ G+ LT++AFS
Sbjct: 14 PAPRPRHVAIIMDGNGRWAKNKCKMRVYGHKAGIKSVRRAVSFAAKHGLDALTLYAFSSE 73
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP +E++ L++L L+ +L KNNI + +IG+ + + AE T
Sbjct: 74 NWRRPATEVTALLELFVWALRHEVKNLHKNNICLHIIGDTSQFSTSLQDHITRAEALTAK 133
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N GL L IA NY R +I ++++ + + ++ G + +++ L+ + + DL+I
Sbjct: 134 NDGLKLNIAANYGGRWDIIQSVRQLARQVQEGLLQPEELNEELLDSCICLNTQSPIDLVI 193
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RTGG R+S+FLLWQ AY+E F WPDF F AL ++ R+RRFGGLS
Sbjct: 194 RTGGNHRISNFLLWQTAYAELYFTDILWPDFDEPAFETALEEFARRERRFGGLS 247
>gi|317153888|ref|YP_004121936.1| undecaprenyl diphosphate synthase [Desulfovibrio aespoeensis
Aspo-2]
gi|316944139|gb|ADU63190.1| undecaprenyl diphosphate synthase [Desulfovibrio aespoeensis
Aspo-2]
Length = 236
Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats.
Identities = 101/238 (42%), Positives = 134/238 (56%), Gaps = 4/238 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M S + P H+ IIMDGNGRWA RGLPR GH+ G E +V E+G+K+LT++ FS
Sbjct: 1 MQSITAPTHVAIIMDGNGRWAKQRGLPRTEGHKAGTEAARAVVTRCRELGVKHLTLYTFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP E+ L L+ +FL + SLKK +I++RV+G + + LK QT
Sbjct: 61 KENWARPKDEVRTLFDLLTTFLTREESSLKKQSIRLRVLGEIDDMPMAVRQTLKHVMRQT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ L +A NYS RDEI RA + + + A L T+ PDPDL
Sbjct: 121 AKCEAMTLNLALNYSGRDEILRAARALVAK----GTAPDAITEEAFAAELWTAGQPDPDL 176
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IIRT GE RLS++LL+Q AYSEF F YWPDF+ + AL + R RRFG ++
Sbjct: 177 IIRTSGEMRLSNYLLFQCAYSEFYFTDIYWPDFTPDELDKALVELAGRRRRFGMTDEQ 234
>gi|119962993|ref|YP_947964.1| undecaprenyl diphosphate synthase [Arthrobacter aurescens TC1]
gi|119949852|gb|ABM08763.1| undecaprenyl diphosphate synthase [Arthrobacter aurescens TC1]
Length = 274
Score = 274 bits (702), Expect = 6e-72, Method: Composition-based stats.
Identities = 99/235 (42%), Positives = 140/235 (59%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ S P H+ I+MDGNGRWA RGLPR GH+ G +++A A E+GIK ++++AF
Sbjct: 31 NIPSELIPQHVAIVMDGNGRWANQRGLPRIEGHKAGEPALLDVMAGAIELGIKYVSVYAF 90
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRR E+ L+ K L++ L + +++R G R L ++ L+EAED
Sbjct: 91 STENWRRSPEEVRFLMGFNKDVLRRQRNQLDEWGVRIRWAGRRPRLWGSVIRELEEAEDY 150
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
TR N L + NY R EI+ A+ I D+ +G + V I +YLD D+PD D
Sbjct: 151 TRANDTCTLTMCVNYGGRAEIADAVSAIAHDVAAGRLKPGSVSEKTIQRYLDEPDLPDVD 210
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R+ GE+RLS+FLLWQ AY+EFVF+ WPD R + A+ Y RDRR+GG
Sbjct: 211 LFLRSSGEQRLSNFLLWQSAYAEFVFMDTLWPDVDRRTLWDAVEIYAKRDRRYGG 265
>gi|217077681|ref|YP_002335399.1| undecaprenyl diphosphate synthase [Thermosipho africanus TCF52B]
gi|217037536|gb|ACJ76058.1| undecaprenyl diphosphate synthase [Thermosipho africanus TCF52B]
Length = 225
Score = 274 bits (702), Expect = 6e-72, Method: Composition-based stats.
Identities = 90/229 (39%), Positives = 126/229 (55%), Gaps = 6/229 (2%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+HI IMDGNGRWA + PR GH G E+V AE G+K T +AFS NW+RP
Sbjct: 3 NHIAFIMDGNGRWAKKQNKPRMYGHYAGAYKIEEVVRWCAEYGVKYTTFYAFSTENWKRP 62
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E++ + L++S + + + + K +++ G L + I + + +++T+ N +
Sbjct: 63 KGEVNFIFGLLQSKIGEFYERMNKEGVRLVFSGRLKELGEKIYNICMKYQEKTKNNDKIV 122
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+ +A NY R EI AIK I D+D ++L D+PDPDLIIRT GE
Sbjct: 123 VNMALNYGGRAEIVDAIKKII------DSKISDIDEEKFREFLYFPDIPDPDLIIRTSGE 176
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RLS+FL WQ AYSE F WPDFSRE A+ + R RRFGG+
Sbjct: 177 MRLSNFLTWQSAYSELYFTDVLWPDFSREDLDRAIEDFKKRQRRFGGIK 225
>gi|92112700|ref|YP_572628.1| undecaprenyl pyrophosphate synthetase [Chromohalobacter salexigens
DSM 3043]
gi|91795790|gb|ABE57929.1| Undecaprenyl pyrophosphate synthetase [Chromohalobacter salexigens
DSM 3043]
Length = 252
Score = 274 bits (702), Expect = 6e-72, Method: Composition-based stats.
Identities = 102/237 (43%), Positives = 139/237 (58%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ P H+ +IMDGN RWA A GL GHR G+E ++ AAE GI LT+FAFS
Sbjct: 10 RAGELPRHVAVIMDGNNRWARAHGLSGIRGHRAGVEAVRAVIGRAAERGIGTLTLFAFSS 69
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP SE+S L++L LK+ L ++I++ VIG+R D I + AE TR
Sbjct: 70 ENWKRPASEVSALMELFLWALKREVKKLHAHDIRLTVIGDRAEFSDAIQQYIARAEALTR 129
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N GL+L IA NY R +I+ A + + + + G + VD + + +D DL
Sbjct: 130 DNRGLHLVIAANYGGRWDIAHAARRLAERVACGELSPEAVDEESLGAEVSLADEAPVDLC 189
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRT GE+R+S+FLLWQ+AY+EF F PE WPDF E F AL+ Y R RRFG ++
Sbjct: 190 IRTSGEQRISNFLLWQLAYAEFYFTPELWPDFGAEAFDAALDAYGARQRRFGMTQEQ 246
>gi|260554745|ref|ZP_05826966.1| di-trans,poly-cis-decaprenylcistransferase [Acinetobacter baumannii
ATCC 19606]
gi|332873907|ref|ZP_08441847.1| di-trans,poly-cis-decaprenylcistransferase [Acinetobacter baumannii
6014059]
gi|193077566|gb|ABO12400.2| undecaprenyl pyrophosphate synthetase [Acinetobacter baumannii ATCC
17978]
gi|260411287|gb|EEX04584.1| di-trans,poly-cis-decaprenylcistransferase [Acinetobacter baumannii
ATCC 19606]
gi|322508740|gb|ADX04194.1| ispU [Acinetobacter baumannii 1656-2]
gi|323518345|gb|ADX92726.1| undecaprenyl diphosphate synthase [Acinetobacter baumannii
TCDC-AB0715]
gi|332737893|gb|EGJ68780.1| di-trans,poly-cis-decaprenylcistransferase [Acinetobacter baumannii
6014059]
Length = 250
Score = 274 bits (702), Expect = 6e-72, Method: Composition-based stats.
Identities = 92/233 (39%), Positives = 143/233 (61%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IIMDGN R+A + + GHR+G V + IV + G++ LT+FAFS NW
Sbjct: 9 LPQHVAIIMDGNNRFAKKNQMQKGDGHREGKNVLDPIVEHCVKTGVRALTVFAFSSENWN 68
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ L+KL++ + + +KK NI +R IG+R L ++ ++++AE QT +
Sbjct: 69 RPQYEVDLLMKLLEETIHEQIPRMKKFNIALRFIGDRSRLPSHLVALMEDAEQQTAHHDA 128
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ L IA +Y +I+ A K + Q + G + + ++ L KY+ +D+P DL+IRTG
Sbjct: 129 MTLTIAVSYGGMWDIANAAKQVAQAVSRGEIDADQINVDLFEKYVSLNDLPAVDLLIRTG 188
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
G+ R+S+FLLWQ AY+E F WP+F+ E F HALN ++ R+RRFG S++
Sbjct: 189 GDFRISNFLLWQAAYAELYFTDTLWPEFTVEEFDHALNVFSGRERRFGKTSEQ 241
>gi|227878825|ref|ZP_03996732.1| undecaprenyl pyrophosphate synthetase [Lactobacillus crispatus
JV-V01]
gi|256843347|ref|ZP_05548835.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus crispatus
125-2-CHN]
gi|256849834|ref|ZP_05555265.1| undecaprenyl pyrophosphate synthetase [Lactobacillus crispatus
MV-1A-US]
gi|262046920|ref|ZP_06019880.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus crispatus
MV-3A-US]
gi|293381208|ref|ZP_06627216.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus crispatus
214-1]
gi|312978247|ref|ZP_07789991.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus crispatus
CTV-05]
gi|227861573|gb|EEJ69185.1| undecaprenyl pyrophosphate synthetase [Lactobacillus crispatus
JV-V01]
gi|256614767|gb|EEU19968.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus crispatus
125-2-CHN]
gi|256713323|gb|EEU28313.1| undecaprenyl pyrophosphate synthetase [Lactobacillus crispatus
MV-1A-US]
gi|260572902|gb|EEX29462.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus crispatus
MV-3A-US]
gi|290922248|gb|EFD99242.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus crispatus
214-1]
gi|310894965|gb|EFQ44035.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus crispatus
CTV-05]
Length = 244
Score = 274 bits (702), Expect = 6e-72, Method: Composition-based stats.
Identities = 100/233 (42%), Positives = 144/233 (61%), Gaps = 3/233 (1%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+H+ IIMDGNGRWA R PR GHR+G++ I AA ++GIK LT++AFS NW RP
Sbjct: 9 NHLAIIMDGNGRWAKKRHRPRFVGHREGMDNVERITLAADKLGIKVLTLYAFSTENWARP 68
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E++ L+ L F K +L +NN+KV ++G L + +++ A +T NTGL
Sbjct: 69 KEEVAYLMNLPVRFFDKYMPTLMENNVKVNIMGYLDELPEKTYRIVQRAMSETANNTGLI 128
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV---PDPDLIIRT 188
L AFNY SR EI+ A++ + IE+GS+ S ++ +I+ +L T + DPDL+IRT
Sbjct: 129 LNFAFNYGSRREITSAMQELGGMIEAGSLKSEEITEKMISDHLMTKNFGPYQDPDLLIRT 188
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
GE+R+S+FLLWQ+AYSE F + WPDF + Y R+RRFG + +
Sbjct: 189 SGEQRISNFLLWQLAYSELAFSEKNWPDFDENDLKKFVEDYKHRNRRFGKVDE 241
>gi|219871429|ref|YP_002475804.1| undecaprenyl pyrophosphate synthetase [Haemophilus parasuis SH0165]
gi|219691633|gb|ACL32856.1| undecaprenyl pyrophosphate synthetase [Haemophilus parasuis SH0165]
Length = 222
Score = 274 bits (701), Expect = 6e-72, Method: Composition-based stats.
Identities = 94/221 (42%), Positives = 130/221 (58%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA RG R GHRKG++ + V A GIK LT++AFS NW RP E++
Sbjct: 1 MDGNGRWAKQRGKLRVFGHRKGVKAVHSAVNFALTQGIKVLTLYAFSSENWSRPKLEVAA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ L L L NNI++++IG++ + + + ++ AE T NT L L IA N
Sbjct: 61 LMTLFIETLDLNIKKLHSNNIRLKIIGDKTAFSEALQEKIELAEQLTNKNTALTLNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y + +I +A K I +++ + D+ + L T D P DL+IRT GE+R+S+F
Sbjct: 121 YGGQWDIVQATKRIAHQVKNNVIPIEDITTDYFQHNLSTKDQPQVDLLIRTSGEQRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
LLWQ+AY+E VF P WPDF + F A+ Y RDRRFGG
Sbjct: 181 LLWQIAYAELVFSPVLWPDFDEKAFTDAVIAYQQRDRRFGG 221
>gi|297618677|ref|YP_003706782.1| undecaprenyl diphosphate synthase [Methanococcus voltae A3]
gi|297377654|gb|ADI35809.1| undecaprenyl diphosphate synthase [Methanococcus voltae A3]
Length = 264
Score = 274 bits (701), Expect = 7e-72, Method: Composition-based stats.
Identities = 83/242 (34%), Positives = 132/242 (54%), Gaps = 4/242 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+V + + P H+ +IMDGN R A G+ GH+ G +++ + IK +TI
Sbjct: 23 LVEIISKQNVPKHVAVIMDGNRRAAKLLGIEATNGHQLGANKVKDLIEWCVLLDIKVITI 82
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFS+ N+ R E+ L+KL + + + + IKV+ IG L + + ++
Sbjct: 83 YAFSLENFNRSDDEVYTLMKLFEKEFENLSENKYIYEKGIKVKAIGKLEKLPEKVRDSIE 142
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
+ E T N L IA +Y + EI A+KNI +D++ G++ D++ L++K L T D
Sbjct: 143 KVEKLTENNKNYYLNIAISYGGQQEIIDAVKNIAKDVKDGNINIEDINEELVSKNLYTKD 202
Query: 179 V--PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
+ P+PDLIIRT GE+R+S+FL WQ YSE F WP F + F ++ Y R+RR+
Sbjct: 203 LPHPEPDLIIRTSGEERISNFLTWQSCYSELYFCESNWPQFRKVDFLRSIRDYQKRNRRY 262
Query: 237 GG 238
G
Sbjct: 263 GK 264
>gi|93006536|ref|YP_580973.1| undecaprenyl diphosphate synthase [Psychrobacter cryohalolentis K5]
gi|92394214|gb|ABE75489.1| Undecaprenyl pyrophosphate synthetase [Psychrobacter cryohalolentis
K5]
Length = 252
Score = 274 bits (701), Expect = 7e-72, Method: Composition-based stats.
Identities = 89/242 (36%), Positives = 140/242 (57%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M ++ + P HI +IMDGN R+ L + GH G + + IV GI+ LT+
Sbjct: 3 MSENLAPALLPRHIAVIMDGNNRYGKVHNLGKGQGHIAGKDALDPIVEYCVSTGIEVLTV 62
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW+RP +E++ L+ L+ + + + K I++R IG+R L DD+ ++ +A
Sbjct: 63 FAFSSENWQRPPTEVALLMHLLSLTINEQMPRMVKYRIRLRFIGDRSQLSDDLQLLMADA 122
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E +T + L IA +Y + +I+ A K + Q +++G + D+D + +Y+ +D P
Sbjct: 123 EAKTADFDAMTLVIAISYGGQWDIAHAAKQLLQQVQAGQLSIDDIDKEKLGEYVQLADAP 182
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
+ D++IRTGGE RLS+FLLWQ AY+E F P WPDFS + L + R RRFG S
Sbjct: 183 EVDMLIRTGGEYRLSNFLLWQSAYAELFFTPTLWPDFSVDELAAMLEDFAQRQRRFGKTS 242
Query: 241 KK 242
++
Sbjct: 243 EQ 244
>gi|282891921|ref|ZP_06300400.1| hypothetical protein pah_c200o080 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498181|gb|EFB40521.1| hypothetical protein pah_c200o080 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 263
Score = 274 bits (701), Expect = 7e-72, Method: Composition-based stats.
Identities = 84/228 (36%), Positives = 124/228 (54%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ II DGN RWA + GHR+G + EIV A E+G++ +T +AFS NW R
Sbjct: 36 PRHVAIIPDGNRRWAKKQQASAKVGHREGADNLIEIVKACKELGVQVVTFYAFSTENWAR 95
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L+ +L + ++ + I IG+ + ++ + E + T+ +
Sbjct: 96 PQEEVQALMWLLDVYLVEQRETMLQEGICFDTIGDLSKIPANVAETIAETKRFTKQCDQI 155
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ +A NY RD+I RA+ I D + IAKYLDT+D+ DPDL+IRT G
Sbjct: 156 RMVLAVNYGGRDDICRAVNQIVDDCMQQRGTPEKITEEAIAKYLDTADIGDPDLLIRTSG 215
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E R+S+FLLWQ++Y+E WPDF+ AL + R RR GG
Sbjct: 216 EWRISNFLLWQISYAEVYVTDVLWPDFTPAHLLEALYDFQKRKRRLGG 263
>gi|296241890|ref|YP_003649377.1| undecaprenyl pyrophosphate synthetase [Thermosphaera aggregans DSM
11486]
gi|296094474|gb|ADG90425.1| Undecaprenyl pyrophosphate synthetase [Thermosphaera aggregans DSM
11486]
Length = 271
Score = 274 bits (701), Expect = 8e-72, Method: Composition-based stats.
Identities = 96/238 (40%), Positives = 133/238 (55%), Gaps = 3/238 (1%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P+HIGII DGN RWA GL GH G E E + ++ IK++TI+A
Sbjct: 34 QIKNGPFPNHIGIIPDGNRRWARRIGLEPAEGHLFGYEKIKETLRWIWDLNIKHVTIYAM 93
Query: 64 SINNW-RRPVSEISELVKLIKSFLK--KGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
S N RP E +L +L L K + K+ ++VRVIG+ + ++ +K
Sbjct: 94 STENCKHRPPEEREKLFELAFKGLNELKNLPEIHKHRVRVRVIGDYSLVPSHLISAIKAL 153
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E++T+ L IA Y R EI AIK I D+ G + +D+ + KYL T+D P
Sbjct: 154 EEETKNYDNYTLNIALCYGGRQEILDAIKKIVNDVVEGKLDPNDISEEVFKKYLYTNDSP 213
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DPDLIIRT GE+R+S+FLLWQ AYSE F YWP+F + F+ A+ Y R+RRFG
Sbjct: 214 DPDLIIRTSGEERISNFLLWQSAYSELYFCDVYWPEFRKIDFWRAIRSYQFRERRFGR 271
>gi|239815584|ref|YP_002944494.1| undecaprenyl diphosphate synthase [Variovorax paradoxus S110]
gi|239802161|gb|ACS19228.1| undecaprenyl diphosphate synthase [Variovorax paradoxus S110]
Length = 247
Score = 274 bits (701), Expect = 8e-72, Method: Composition-based stats.
Identities = 90/233 (38%), Positives = 134/233 (57%), Gaps = 7/233 (3%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI I+MDGNGRWA R LPR AGH++G+E V A + G+ LT+FAFS NW
Sbjct: 8 IPHHIAIVMDGNGRWATRRFLPRVAGHKQGVESLRRCVKACVDRGVGILTVFAFSSENWN 67
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+S L++++ L + L ++ +++ +G R L ++ L +AE T NT
Sbjct: 68 RPPEEVSGLMEIMVGALAREVPKLSRDGVQLHFVGERAGLSKKMVQGLVDAESATAQNTK 127
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L + FNY R +I+RA + + + + + + + + VPDPDL+IRTG
Sbjct: 128 LILNVCFNYGGRWDIARAAARLAEQG-------EALTEANLDRAMALAHVPDPDLLIRTG 180
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+RLS+FLLWQ AY+E F + WP+F + + + R+RRFG S +
Sbjct: 181 GEQRLSNFLLWQSAYAELFFSDKLWPEFDQAELDAGIAAFQARERRFGKTSAQ 233
>gi|153873178|ref|ZP_02001844.1| Undecaprenyl pyrophosphate synthetase [Beggiatoa sp. PS]
gi|152070357|gb|EDN68157.1| Undecaprenyl pyrophosphate synthetase [Beggiatoa sp. PS]
Length = 231
Score = 274 bits (701), Expect = 8e-72, Method: Composition-based stats.
Identities = 92/225 (40%), Positives = 144/225 (64%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA R LPR AGH+ G+E +V AE I+ LT+FAFS NW+RP E++
Sbjct: 1 MDGNGRWAKKRLLPRHAGHQAGVETVRRVVGFCAEQRIEVLTLFAFSSENWQRPKQEVTL 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L L+K +L +N++++RV+G++ + + + + +AE+ T+ N GL L +A N
Sbjct: 61 LMELFLKALQKEITNLHENHVRLRVVGDKTAFPEKLQQQMVKAEELTKRNAGLTLVVAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R ++ A+K++ +E G + S +++ + L +D+P+PDL IRT GEKR+S+F
Sbjct: 121 YGGRWDMVEAVKSLALQVEQGRLTSQEINEEYFGRQLCLADLPEPDLFIRTSGEKRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
LLWQ+AY+E F WPDF+++ F AL + R RRFG ++
Sbjct: 181 LLWQLAYAEMFFTDTLWPDFNKDTFMQALEFFASRQRRFGRTGEQ 225
>gi|121604664|ref|YP_981993.1| undecaprenyl diphosphate synthase [Polaromonas naphthalenivorans
CJ2]
gi|120593633|gb|ABM37072.1| Undecaprenyl pyrophosphate synthetase [Polaromonas
naphthalenivorans CJ2]
Length = 240
Score = 274 bits (701), Expect = 8e-72, Method: Composition-based stats.
Identities = 91/233 (39%), Positives = 130/233 (55%), Gaps = 7/233 (3%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ I+MDGNGRWA R LPR AGH++G++ + V A GI LT+FAFS NW
Sbjct: 8 VPHHVAIVMDGNGRWAKKRYLPRIAGHKQGVDALSRCVKACLARGIGVLTVFAFSSENWS 67
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+S L+ L+ L K SL N +++ IG+R + + L +AE T N
Sbjct: 68 RPSEEVSGLMDLVVLALAKKVQSLNANGVQIHFIGDRQRFSERVRSALVQAESSTANNQR 127
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L + FNY R +I++A + + + + + + S VPDPDL+IRTG
Sbjct: 128 LVFNVCFNYGGRWDIAQAAQKLA-------SRGEAITELSLDRAMAMSHVPDPDLLIRTG 180
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE R+S+FLLWQ+AYSE F + WP+F A+ + R+RRFG ++
Sbjct: 181 GELRISNFLLWQLAYSELYFSDKLWPEFDEAALDTAIAAFAARERRFGQTPEQ 233
>gi|168039317|ref|XP_001772144.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676475|gb|EDQ62957.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 256
Score = 274 bits (701), Expect = 8e-72, Method: Composition-based stats.
Identities = 100/241 (41%), Positives = 145/241 (60%), Gaps = 3/241 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + S+ P H+ IIMDGN RWA RGLP GH G+ E+V A GIK LT+
Sbjct: 14 LPEELNPSALPKHVAIIMDGNSRWAERRGLPASMGHEAGVRSLKEVVKLAHTWGIKVLTV 73
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW RP +E+ L+ L ++ LK L K N++V +G+ SL + + ++
Sbjct: 74 FAFSTENWLRPKTEVDFLMLLFENVLKNELSILAKENVRVHCMGDLRSLPESLRNMVSTL 133
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+++T+ NTGL IA +YS R +I+ A + + +E+G + S D++ ++I + + TS +
Sbjct: 134 DERTKHNTGLKFCIALSYSGRYDITNACQRLAAKVEAGEMSSSDINEAVIDEEMKTSWLG 193
Query: 181 D---PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+ PDL+IRT GE+RLS+FLLWQ+AYSE F+ WPDF F AL Y R RRFG
Sbjct: 194 EARNPDLLIRTSGEQRLSNFLLWQIAYSELYFVDSLWPDFGFVQFKEALLAYQNRSRRFG 253
Query: 238 G 238
Sbjct: 254 K 254
>gi|213158372|ref|YP_002319670.1| undecaprenyl diphosphate synthase [Acinetobacter baumannii AB0057]
gi|215483170|ref|YP_002325377.1| di-trans,poly-cis-decaprenylcistransferase [Acinetobacter baumannii
AB307-0294]
gi|301346281|ref|ZP_07227022.1| undecaprenyl pyrophosphate synthetase [Acinetobacter baumannii
AB056]
gi|301512092|ref|ZP_07237329.1| undecaprenyl pyrophosphate synthetase [Acinetobacter baumannii
AB058]
gi|301595692|ref|ZP_07240700.1| undecaprenyl pyrophosphate synthetase [Acinetobacter baumannii
AB059]
gi|332852501|ref|ZP_08434240.1| di-trans,poly-cis-decaprenylcistransferase [Acinetobacter baumannii
6013150]
gi|332871295|ref|ZP_08439844.1| di-trans,poly-cis-decaprenylcistransferase [Acinetobacter baumannii
6013113]
gi|213057532|gb|ACJ42434.1| undecaprenyl diphosphate synthase [Acinetobacter baumannii AB0057]
gi|213986726|gb|ACJ57025.1| di-trans,poly-cis-decaprenylcistransferase [Acinetobacter baumannii
AB307-0294]
gi|332729203|gb|EGJ60546.1| di-trans,poly-cis-decaprenylcistransferase [Acinetobacter baumannii
6013150]
gi|332731579|gb|EGJ62865.1| di-trans,poly-cis-decaprenylcistransferase [Acinetobacter baumannii
6013113]
Length = 250
Score = 274 bits (700), Expect = 9e-72, Method: Composition-based stats.
Identities = 93/233 (39%), Positives = 144/233 (61%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IIMDGN R+A + + GHR+G V + IV + G++ LT+FAFS NW
Sbjct: 9 LPQHVAIIMDGNNRFAKKNQMQKGDGHREGKNVLDPIVEHCVKTGVRALTVFAFSSENWN 68
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ L+KL++ + + +KK NI +R IG+R L ++ ++++AE QT +
Sbjct: 69 RPQYEVDLLMKLLEETIHEQIPRMKKFNIALRFIGDRSRLPSHLVALMEDAEQQTAHHEA 128
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ L IA +Y +I+ A K + Q + G + + ++ L AKY+ +D+P DL+IRTG
Sbjct: 129 MTLTIAVSYGGMWDIANAAKQVAQAVSRGEIDADQINVDLFAKYVSLNDLPAVDLLIRTG 188
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
G+ R+S+FLLWQ AY+E F WP+F+ E F HALN ++ R+RRFG S++
Sbjct: 189 GDFRISNFLLWQAAYAELYFTDTLWPEFTVEEFDHALNVFSGRERRFGKTSEQ 241
>gi|226532742|ref|NP_001150939.1| undecaprenyl pyrophosphate synthetase [Zea mays]
gi|195643120|gb|ACG41028.1| undecaprenyl pyrophosphate synthetase [Zea mays]
Length = 287
Score = 274 bits (700), Expect = 9e-72, Method: Composition-based stats.
Identities = 96/242 (39%), Positives = 138/242 (57%), Gaps = 5/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + S P H+ ++MDGN RWA ARGLP AGH G E+V + G++ LT
Sbjct: 42 LPGGLRAESLPRHVAVVMDGNSRWARARGLPSAAGHEAGRRALEEVVRLSRAWGVRTLTA 101
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW RP E+ L+ + +++ + I++RVIG+ L + +EA
Sbjct: 102 FAFSHENWSRPKVEVEFLMGQFERAIRESVAEFLREGIRLRVIGDSSRLPVSLQRTAREA 161
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS--- 177
E+ TR N+ L+L +A +YS R +I +A + + Q + + D+D SL A L+TS
Sbjct: 162 EEATRNNSQLDLTLAISYSGRRDIVQACRTLAQKVRDKLLEPEDIDESLFAGELETSHAN 221
Query: 178 --DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
++P PDL+IRT GE RLS+FLLWQ AY+E F WPDF + AL + RDRR
Sbjct: 222 GNELPYPDLVIRTSGELRLSNFLLWQSAYAELFFTDTLWPDFGEADYLQALVSFQSRDRR 281
Query: 236 FG 237
FG
Sbjct: 282 FG 283
>gi|326507232|dbj|BAJ95693.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 252
Score = 274 bits (700), Expect = 9e-72, Method: Composition-based stats.
Identities = 96/241 (39%), Positives = 137/241 (56%), Gaps = 3/241 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + S P H+ ++MDGN RWA ARG+P GH G E V + GI+ LT
Sbjct: 9 LLRGLRPESLPRHVAVVMDGNSRWARARGMPPAFGHEAGRRALLETVRLSRAWGIRALTA 68
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW RP +E+ L+ L + ++ ++ +RVIG+ L + ++A
Sbjct: 69 FAFSHENWSRPKTEVDFLMGLFERVIRDSVAEFSRDGTCLRVIGDCSRLPASLQRTARDA 128
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT---S 177
E+ TR N+ L+L +A +YS R +I +A +++ Q + + D+D SL A L+T S
Sbjct: 129 EEATRNNSQLDLTLAISYSGRRDIVQACRSLAQKVRDELLRPEDIDESLFAGELETSRGS 188
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
++P PDL+IRT GE RLS+FLLWQ AYSE F WPDF + AL Y RDRRFG
Sbjct: 189 ELPCPDLLIRTSGEMRLSNFLLWQSAYSELFFTDTLWPDFGEADYLEALCSYQSRDRRFG 248
Query: 238 G 238
Sbjct: 249 R 249
>gi|72161257|ref|YP_288914.1| undecaprenyl pyrophosphate synthetase [Thermobifida fusca YX]
gi|71914989|gb|AAZ54891.1| Undecaprenyl pyrophosphate synthetase [Thermobifida fusca YX]
Length = 282
Score = 274 bits (700), Expect = 9e-72, Method: Composition-based stats.
Identities = 93/235 (39%), Positives = 136/235 (57%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P H+ I+MDGNGRWA RGLPR GH+ G +++ A E+G+ L+ +AF
Sbjct: 29 QLPRELIPRHVAIVMDGNGRWAKQRGLPRTEGHKAGESSLFDVIEGALELGVPYLSAYAF 88
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + +++ L ++VR G L ++ L EAE+
Sbjct: 89 STENWKRSPDEVRFLMGFNRDVIRRRRDELHARGVRVRWAGRPGRLWKSVIKELTEAEEL 148
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NT L L NY R EI+ A + +D+ +G + + V + +A+YL D+PD D
Sbjct: 149 TKHNTKLTLQFCVNYGGRAEIADAAAALARDVAAGRLSPNRVTEATLARYLYHPDIPDVD 208
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L IR+ GE+RLS+FLLWQ +Y+EFVF+ WPDF R F+ A Y RDRR+GG
Sbjct: 209 LFIRSSGEQRLSNFLLWQSSYAEFVFLDTLWPDFDRRHFWQACEIYARRDRRYGG 263
>gi|297194473|ref|ZP_06911871.1| undecaprenyl pyrophosphate synthetase 2 [Streptomyces
pristinaespiralis ATCC 25486]
gi|197718716|gb|EDY62624.1| undecaprenyl pyrophosphate synthetase 2 [Streptomyces
pristinaespiralis ATCC 25486]
Length = 281
Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats.
Identities = 84/235 (35%), Positives = 138/235 (58%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P+H+ +MDGNGRWA RGLPR GH+ G V +++ E+G+KNL+++AF
Sbjct: 28 KIPAELVPNHVACVMDGNGRWAKERGLPRTEGHKVGEGVVLDVLKGCLEMGVKNLSLYAF 87
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + +++ + + I++R +G + ++ L+ A++Q
Sbjct: 88 STENWKRSPDEVRFLMNFNRDVIRRRRDEMDELGIRIRWVGRMPKMWKSVVQELQVAQEQ 147
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T N + L+ NY R E++ A + + +D+ +G + V+ AKYL D+PD D
Sbjct: 148 TVGNDAMTLYFCVNYGGRAEVADAAQALARDVAAGRLDPGKVNEKTFAKYLYYPDMPDVD 207
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R GE+R+S++L+WQ +Y+E VF WPDF R + A +Y RDRRFGG
Sbjct: 208 LFLRPSGEQRISNYLIWQSSYAEMVFQDVLWPDFDRRDLWRACLEYAQRDRRFGG 262
>gi|260424722|ref|ZP_05733060.2| di-trans,poly-cis-decaprenylcistransferase [Dialister invisus DSM
15470]
gi|260402949|gb|EEW96496.1| di-trans,poly-cis-decaprenylcistransferase [Dialister invisus DSM
15470]
Length = 242
Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats.
Identities = 101/231 (43%), Positives = 138/231 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ II+DGNGRWA RG R GH+ G IV AA +GI+ LTI+AFS NW+R
Sbjct: 9 PRHVAIILDGNGRWAQQRGRERTYGHQVGAANVKNIVRAAGHMGIRCLTIYAFSTENWKR 68
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L+ L K++L L +N++V +IG+ + L + +K E T N GL
Sbjct: 69 PAFEVNFLMHLFKNYLIGQLRELIADNVQVHIIGDTMELPSSLQEEIKVCEKDTANNDGL 128
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY R E+ A+++I Q + G + + V I +L S D DL+IRTGG
Sbjct: 129 ILNVAINYGGRMELVNAVRDISQKVAEGRMEADSVTEETITNHLYPSASSDVDLLIRTGG 188
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E R+S+FLLWQV+YSE F P WPDFS E A+ + RDRRFGGL++
Sbjct: 189 ESRISNFLLWQVSYSELYFTPVLWPDFSSEELEKAVFWFTGRDRRFGGLTE 239
>gi|168000533|ref|XP_001752970.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695669|gb|EDQ82011.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 253
Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats.
Identities = 99/241 (41%), Positives = 142/241 (58%), Gaps = 3/241 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + S P H+ IIMDGN RWA RGLP GH G+ E+V A GIK L++
Sbjct: 11 LPEELDVSKIPKHVAIIMDGNSRWAERRGLPASMGHEAGVRSLKEVVKLANTWGIKVLSV 70
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW RP +E+ L+ L ++ LK SL K N++V +G+ L D + ++
Sbjct: 71 FAFSTENWLRPKAEVDFLMLLFENVLKDELSSLAKENVRVHCMGDLTLLPDSLKNLVSAL 130
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV- 179
+++T+ NTGL IA +YS R++I+ A + + +E+G + S D+ ++ + L TS +
Sbjct: 131 DERTKNNTGLKFCIALSYSGRNDIANACQRLAAKVEAGELSSSDITETMFEEELKTSWLG 190
Query: 180 --PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DPDL+IRT E+R+S+FLLWQ AY+EF F+ WPDF F AL Y R RRFG
Sbjct: 191 EERDPDLLIRTSEEQRISNFLLWQSAYTEFYFVDSLWPDFGVAQFKEALLTYQNRSRRFG 250
Query: 238 G 238
Sbjct: 251 K 251
>gi|291086156|ref|ZP_06354977.2| di-trans,poly-cis-decaprenylcistransferase [Citrobacter youngae
ATCC 29220]
gi|291068947|gb|EFE07056.1| di-trans,poly-cis-decaprenylcistransferase [Citrobacter youngae
ATCC 29220]
Length = 229
Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats.
Identities = 85/223 (38%), Positives = 132/223 (59%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA +G R GH+ G + V+ AA GI LT++AFS NW RP E+S
Sbjct: 1 MDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIDALTLYAFSSENWNRPAQEVSA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L L +L ++N+++R+IG+ + + ++++E T NTGL L IA N
Sbjct: 61 LMELFVWALDSEVKNLHRHNVRLRIIGDISRFNSRLQERIRKSEALTAQNTGLTLNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I + ++ + Q ++ G + +D ++ + + ++ DL+IRTGGE R+S+F
Sbjct: 121 YGGRWDIVQGVRQLAQQVQEGLLRPEQIDEEMLGQQICMHELAPVDLVIRTGGEHRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LLWQ+AY+E F WPDF + F AL+ + R+RRFGG
Sbjct: 181 LLWQIAYAELYFTDVLWPDFDEQDFEGALHAFANRERRFGGTE 223
>gi|297745904|emb|CBI15960.3| unnamed protein product [Vitis vinifera]
Length = 233
Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats.
Identities = 91/231 (39%), Positives = 142/231 (61%), Gaps = 2/231 (0%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P+H+ +IMDGN RWA RGLP +GH+ G+ E+V + GIK L++FAFS +NW
Sbjct: 1 MPEHVAVIMDGNVRWAQKRGLPAASGHQAGVRSLRELVGLCCKWGIKVLSVFAFSYDNWS 60
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ L+ LI+ +K + + I+V VIG+ L + + ++ + E+ T+ N+
Sbjct: 61 RSEGEVGFLMSLIERVVKAELPNFGREGIRVSVIGDLSKLPEQLQKLIIDVEETTKENSR 120
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS--DVPDPDLIIR 187
L +A +YS + +I +A KNI ++ G + D++ SLI + L T+ + P PDL+IR
Sbjct: 121 LQFIVALSYSGQCDILQACKNIGYKVKDGLIEPEDINKSLIEQELQTNCTEFPFPDLLIR 180
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
T GE R+S+F+LWQ+AY+E F WPDF ++ F AL+ + R RR+GG
Sbjct: 181 TSGELRVSNFMLWQIAYTELCFFSTLWPDFGKDEFVEALSSFQKRQRRYGG 231
>gi|15678260|ref|NP_275375.1| hypothetical protein MTH232 [Methanothermobacter thermautotrophicus
str. Delta H]
gi|6136144|sp|O26334|UPPS_METTH RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|2621280|gb|AAB84738.1| conserved protein [Methanothermobacter thermautotrophicus str.
Delta H]
Length = 255
Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats.
Identities = 85/238 (35%), Positives = 134/238 (56%), Gaps = 3/238 (1%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARG-LPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
++ P H+ IIMDGN R++ +G + GH+KGIE +++ ++GI+ +T +
Sbjct: 17 RNLRRDRMPRHVAIIMDGNRRYSKLQGSMNPIEGHKKGIETLEKVLDWCVDLGIEIVTAY 76
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
AFS N++RP E+ L+KL + + + KN ++VR +G L +D+ ++
Sbjct: 77 AFSTENFKRPEKEVKGLMKLFRENFEAIASNEKIHKNRVRVRAVGKLELLPEDVRRAIEI 136
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV 179
AE T + + IA Y R EI A + I +D+++G + D+D +I + L T+ +
Sbjct: 137 AEKSTEQYSDRLVNIAIGYDGRQEIVDATRKIAEDVKAGLIDPEDIDEDMINRNLYTAGL 196
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DP LIIRT GE+RLS FLLWQ +YSE F WP+ + F A+ Y R+RRFG
Sbjct: 197 EDPHLIIRTSGEERLSGFLLWQSSYSELYFCDSLWPELRKVDFLRAIRSYQQRERRFG 254
>gi|153823581|ref|ZP_01976248.1| undecaprenyl diphosphate synthase [Vibrio cholerae B33]
gi|126518897|gb|EAZ76120.1| undecaprenyl diphosphate synthase [Vibrio cholerae B33]
Length = 232
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 87/225 (38%), Positives = 139/225 (61%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA A+G PR GH+ G+ + ++ +A +GIK +T+FAFS NWRRP E+
Sbjct: 1 MDGNGRWAKAQGKPRVFGHKNGVAAVRKTISTSARLGIKAVTLFAFSSENWRRPEEEVGV 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L + L L KNN+++RVIG++ + + + +AE T NTG+ + IA N
Sbjct: 61 LMELFMTVLSTEIKKLHKNNLRLRVIGDKSRFSERLQTKIAQAEQLTASNTGMVVNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y + +I +A + + + + G + D+D + ++L +D+PD DL+IRT GE R+S+F
Sbjct: 121 YGGQWDILQATQALAEKVTQGELQPSDIDEDVFKQHLTMADLPDVDLLIRTSGECRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+LWQ+AY+E F P +WP+F A+ + R+RRFG ++
Sbjct: 181 MLWQLAYAEMYFTPVFWPEFDENCLIEAVTWFVNRERRFGCTGEQ 225
>gi|311105987|ref|YP_003978840.1| di-trans,poly-cis-decaprenylcistransferase [Achromobacter
xylosoxidans A8]
gi|310760676|gb|ADP16125.1| di-trans,poly-cis-decaprenylcistransferase [Achromobacter
xylosoxidans A8]
Length = 254
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 92/233 (39%), Positives = 140/233 (60%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P+H+ IIMDGNGRWA R LPR AGH KG++ +V A G++ LT+FAFS NWR
Sbjct: 15 IPEHVAIIMDGNGRWATRRLLPRTAGHAKGVQAVRRVVEACGRAGVRYLTLFAFSSENWR 74
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+S L++L L++ L + +++ VIG+ + + + ++ A+++T N
Sbjct: 75 RPAEEVSLLMRLFVQALEREIGKLDEQGVRLHVIGDLSAFEPRLQELIFAAQERTAHNDR 134
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L+L +A NY R +I +A + + + VD ++++L + P+PDL IRTG
Sbjct: 135 LHLTVAANYGGRWDILQATRAMLAAEPGLASQPQLVDEERLSRHLSMAWAPEPDLFIRTG 194
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+R+S+FL+WQ+AY+EF F YWPDF A + Y R+RRFG S +
Sbjct: 195 GEQRISNFLIWQMAYAEFYFTDRYWPDFGAAELAAAFDWYRTRERRFGRTSAQ 247
>gi|169795683|ref|YP_001713476.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase)
[Acinetobacter baumannii AYE]
gi|169148610|emb|CAM86476.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase)
[Acinetobacter baumannii AYE]
Length = 250
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 93/233 (39%), Positives = 145/233 (62%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IIMDGN R+A + + GHR+G V + IV + G++ LT+FAFS NW
Sbjct: 9 LPQHVAIIMDGNNRFAKKNQMQKGDGHREGKNVLDPIVEHCVKTGVRALTVFAFSSENWN 68
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ L+KL++ + + +KK NI +R IG+R L ++ ++++AE QT +
Sbjct: 69 RPQYEVDLLMKLLEETIHEQIPRMKKFNIALRFIGDRSRLPSHLVALMEDAEQQTAHHEA 128
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ L IA +Y +I+ A K + Q + G + + ++ L AKY++ +D+P DL+IRTG
Sbjct: 129 MTLTIAVSYGGMWDIANAAKQVAQAVSRGEIDADQINVDLFAKYVNLNDLPAVDLLIRTG 188
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
G+ R+S+FLLWQ AY+E F WP+F+ E F HALN ++ R+RRFG S++
Sbjct: 189 GDFRISNFLLWQAAYAELYFTDTLWPEFTVEEFDHALNVFSGRERRFGKTSEQ 241
>gi|302545506|ref|ZP_07297848.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces
hygroscopicus ATCC 53653]
gi|302463124|gb|EFL26217.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces
himastatinicus ATCC 53653]
Length = 279
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 86/235 (36%), Positives = 136/235 (57%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P+H+ +MDGNGRWA RGLPR GH+ G V +++ E+G+KNL+++AF
Sbjct: 28 KIPGELVPNHVACVMDGNGRWAKDRGLPRTEGHKVGEGVVLDVLKGCLELGVKNLSLYAF 87
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + +++ + + I++R G L + L+ A++Q
Sbjct: 88 STENWKRSPDEVRFLMNFNRDVIRRRRDEMDELGIRIRWAGRMPKLWKSVAQELQVAQEQ 147
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N + ++ NY R EI+ A K + +D+ +G + V+ +AKYL D+PD D
Sbjct: 148 TKDNDAMTMYFCMNYGGRAEIADAAKALAEDVRAGKLDPSKVNEKTLAKYLYYPDMPDVD 207
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R GE+R S++L+WQ AY+E V+ WPDF R + A +Y RDRRFGG
Sbjct: 208 LFLRPSGEQRTSNYLIWQSAYAEMVYQDVLWPDFDRRDLWRACLEYASRDRRFGG 262
>gi|296109429|ref|YP_003616378.1| undecaprenyl diphosphate synthase [Methanocaldococcus infernus ME]
gi|295434243|gb|ADG13414.1| undecaprenyl diphosphate synthase [Methanocaldococcus infernus ME]
Length = 266
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 82/242 (33%), Positives = 136/242 (56%), Gaps = 5/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + P HIGIIMDGN R G + GH+ G + E++ E+G+K +T+
Sbjct: 26 LEMEIDKNKIPKHIGIIMDGNRRLGQILG-NKIEGHKLGAKKVKEVLRWCLELGVKVVTL 84
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
++FSI N+ RP E+ L+ L K + + K ++++ IG L +D+ ++
Sbjct: 85 YSFSIENFNRPKDEVEALMNLFKEKFYEAAENRDIHKYKVRIKAIGRLDLLPEDVREAIR 144
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
AE++T+ + + +A Y + EI A++ I + ++ G + +++ LI K+L T+
Sbjct: 145 YAEEKTKHYSNYYINVAIAYGGQQEIVDAVRKIAEKVKRGEIEPEEINKELIDKHLYTAH 204
Query: 179 VPDP--DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
+P P DLIIRT GE+R+S+FL+WQ +YSE F YWP F R A+ +Y R+RRF
Sbjct: 205 LPYPYPDLIIRTSGEERISNFLIWQSSYSELYFCDVYWPLFRRIDLLRAIREYQRRERRF 264
Query: 237 GG 238
G
Sbjct: 265 GR 266
>gi|87303424|ref|ZP_01086212.1| Undecaprenyl pyrophosphate synthetase (UPPS) [Synechococcus sp. WH
5701]
gi|87282072|gb|EAQ74034.1| Undecaprenyl pyrophosphate synthetase (UPPS) [Synechococcus sp. WH
5701]
Length = 267
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 83/240 (34%), Positives = 134/240 (55%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ A + + P H+ +IMDGNGRWA R LPR GHR+G+E + ++ GI LT+
Sbjct: 21 LPACLDPARLPAHVAVIMDGNGRWARQRRLPRMMGHREGVEALKRTLRLCSDWGIGALTV 80
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP E++ L+ L + L + +L++ +++R +G+ L + + + A
Sbjct: 81 YAFSTENWNRPGEEVTFLMALFERVLARELQALERERVRIRFLGDLEQLPEGLQERIAAA 140
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E +T NTG++ + NY R E+ + + + + G + + + L T+
Sbjct: 141 EARTAANTGIHFNVCTNYGGRRELVQVARRLAERAARGDLDPAAISETHFEAELLTAGEV 200
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IR+ GE R+S+FLLWQ+AY+E WPDF+ + A+ Y R RRFGG+
Sbjct: 201 DPDLLIRSSGEYRISNFLLWQLAYAEIHITDVLWPDFNEQALLRAVLDYQGRQRRFGGVE 260
>gi|94986828|ref|YP_594761.1| undecaprenyl pyrophosphate synthase [Lawsonia intracellularis
PHE/MN1-00]
gi|94731077|emb|CAJ54440.1| Undecaprenyl pyrophosphate synthase [Lawsonia intracellularis
PHE/MN1-00]
Length = 240
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 95/241 (39%), Positives = 142/241 (58%), Gaps = 4/241 (1%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+++ + P HI IIMDGNGRWA RG+ R GH++G IV ++GIK LT++
Sbjct: 1 MSNPIPKHLPSHIAIIMDGNGRWAKQRGMNRTEGHKQGALTAKSIVTTCRKIGIKYLTLY 60
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
FS NW RP EI L +L+ SFLK+ + L++N+I + V G+ L L+ A
Sbjct: 61 TFSTENWGRPKDEIHFLFQLLVSFLKQEVHLLEENDICLTVYGDLTKLPLLAKKALQHAI 120
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T+ + + +A NYS R E+ A+K + D + ++D++ + YL + PD
Sbjct: 121 ARTKHCQSMTVNLAINYSGRTELLYAVKKMLTD----RLNANDLNEEIFRNYLYSKQQPD 176
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL+IRT GEKRLS++L++Q AYSE F WPDF+ E + L +YN R+RRFG +
Sbjct: 177 PDLLIRTSGEKRLSNYLIFQTAYSELFFTNTLWPDFTEEELYAILKEYNERNRRFGLTQE 236
Query: 242 K 242
+
Sbjct: 237 Q 237
>gi|256827505|ref|YP_003151464.1| undecaprenyl diphosphate synthase [Cryptobacterium curtum DSM
15641]
gi|256583648|gb|ACU94782.1| undecaprenyl diphosphate synthase [Cryptobacterium curtum DSM
15641]
Length = 289
Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats.
Identities = 98/268 (36%), Positives = 142/268 (52%), Gaps = 33/268 (12%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P H+ +IMDGNGRWA ARG R +GH+ GIE E++ A++VG++ LTI++FS
Sbjct: 22 LNEERVPAHVAVIMDGNGRWAKARGKNRLSGHKAGIEAVRELIRCASDVGVRYLTIYSFS 81
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRRP E++ L+ L + L K +++V IG +L +EA + T
Sbjct: 82 SENWRRPQDEVTGLMDLFARTMLAEARGLHKEHVRVMTIGRTEALPPKTRAAFEEAWELT 141
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDI--ESGSVCSHD------------------ 164
R NTG+ L +A NY +R EI A + + + D
Sbjct: 142 RDNTGMTLVVAVNYGARTEIVDAYNALMVERFSATPGKSHTDLSGITEETAGLTVDGFDA 201
Query: 165 -------------VDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIP 211
+ I+++L T+D+PDPDL+IRT GE R+S+FLLWQ+AY+EF
Sbjct: 202 SLTEAIEHAKLPRITEEDISRHLYTADMPDPDLLIRTSGEMRVSNFLLWQIAYAEFYVTD 261
Query: 212 EYWPDFSRELFFHALNQYNLRDRRFGGL 239
WPDF R F AL Y +R+RR+GG+
Sbjct: 262 TLWPDFDRYEFLRALLSYQVRERRWGGV 289
>gi|251772087|gb|EES52657.1| Undecaprenyl diphosphate synthase [Leptospirillum
ferrodiazotrophum]
Length = 262
Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats.
Identities = 97/230 (42%), Positives = 134/230 (58%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
PP H+ IIMDGNGRWA R LPR AGHR+G + V+A GI+ LT++AFS NW
Sbjct: 17 RPPVHLAIIMDGNGRWAKKRFLPRVAGHRQGAQSVRRTVSACRAWGIRYLTLYAFSWENW 76
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+R E+ L+ L++ +L +K+ I+ R IGNR L + ++ E TR
Sbjct: 77 KRSRPEVDALMALLEDYLDGEEALMKEKAIRFRTIGNRSRLPLSVAKRIEAVEASTREGK 136
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
++L +A +YS R+EI A++ +D++ G + YLDT+ +P PDL+IRT
Sbjct: 137 AMDLILALSYSGREEILAAVRRFAEDVKRGVAQPDILSEEAFDGYLDTAGIPPPDLLIRT 196
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GE R+S+FLLWQ+AY+E F P WPDF E AL Y R RRFG
Sbjct: 197 SGEHRISNFLLWQIAYTELFFDPVLWPDFGEENLKRALMDYQERQRRFGA 246
>gi|71275616|ref|ZP_00651901.1| Di-trans-poly-cis-decaprenylcistransferase [Xylella fastidiosa
Dixon]
gi|71899513|ref|ZP_00681670.1| Di-trans-poly-cis-decaprenylcistransferase [Xylella fastidiosa
Ann-1]
gi|170729575|ref|YP_001775008.1| undecaprenyl pyrophosphate synthase [Xylella fastidiosa M12]
gi|71163507|gb|EAO13224.1| Di-trans-poly-cis-decaprenylcistransferase [Xylella fastidiosa
Dixon]
gi|71730733|gb|EAO32807.1| Di-trans-poly-cis-decaprenylcistransferase [Xylella fastidiosa
Ann-1]
gi|167964368|gb|ACA11378.1| Di-trans,poly-cis-decaprenylcistransferase [Xylella fastidiosa M12]
Length = 255
Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats.
Identities = 91/233 (39%), Positives = 136/233 (58%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI IIMDGNGRWA R PR GHR G++ V E GIK LT+FAFS NW
Sbjct: 12 LPRHIAIIMDGNGRWAERRSRPRTTGHRAGVKAAMRTVDFCLEKGIKMLTLFAFSSENWN 71
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E++ L+++ +G L + ++VR IG R D ++ + +AE T N G
Sbjct: 72 RPADEVNFLMEMSIKLFGRGIEELHRRGVQVRFIGERKRFDIALVEHMTKAEHLTANNQG 131
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L +A +Y R +I+ A + + +D+ +G + +D L+ +++ +D+P PD+ IRT
Sbjct: 132 LILSLAVSYGGRQDITMAARALAKDVAAGRLKPEQIDEDLLGQHMALADLPPPDMFIRTS 191
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
G R+S+FLLWQ+AY+E F WP+F+ + AL+ Y R+RRFG + +
Sbjct: 192 GVIRISNFLLWQIAYTELWFTDVMWPEFNSTVLQQALDDYASRERRFGLTNAQ 244
>gi|297588403|ref|ZP_06947046.1| Di-trans,poly-cis-decaprenylcistransferase [Finegoldia magna ATCC
53516]
gi|297573776|gb|EFH92497.1| Di-trans,poly-cis-decaprenylcistransferase [Finegoldia magna ATCC
53516]
Length = 234
Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats.
Identities = 89/239 (37%), Positives = 134/239 (56%), Gaps = 7/239 (2%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
++ + P HI IIMDGNGRWA PR GH +G++ ++V + +GI+ L+++
Sbjct: 3 LSKLDQDRLPKHIAIIMDGNGRWATKLNKPRVFGHNEGMKRVVDVVENSLNIGIQYLSLY 62
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP EI L++++ ++ L +K+ ++G+ L + ++ ++ A
Sbjct: 63 AFSTENWKRPQKEIDFLMQILIKYIDDQLNKLVTQGVKINILGDISVLPEKVIQKIEYAL 122
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
D T+ N L L IA NY SR EI +A+ + + + L T + PD
Sbjct: 123 DSTKDNDKLILNIAINYGSRQEILKAVNTAIEKG-------EILTDDEFSNLLYTRNQPD 175
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IR GGEKRLS+FLL+Q++Y+E F YWPDF E A+ Y RDRRFGGL
Sbjct: 176 VDLLIRPGGEKRLSNFLLYQMSYAELYFSDIYWPDFKLESLVDAIYWYQNRDRRFGGLK 234
>gi|91788553|ref|YP_549505.1| undecaprenyl pyrophosphate synthetase [Polaromonas sp. JS666]
gi|91697778|gb|ABE44607.1| Undecaprenyl pyrophosphate synthetase [Polaromonas sp. JS666]
Length = 246
Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats.
Identities = 90/233 (38%), Positives = 132/233 (56%), Gaps = 7/233 (3%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ I+MDGNGRWA R LPR AGH++G++ + V A E GI LT+FAFS NW
Sbjct: 8 VPHHVAIVMDGNGRWATKRFLPRIAGHKQGVDSLSRCVRACLERGIAVLTVFAFSSENWN 67
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+S L++L+ L + +L + +++ +G+R L + + L +AE T N
Sbjct: 68 RPFEEVSGLMELLVLSLSREVPNLNASGVRLHFVGDRQRLSEKVQAGLAQAEHLTSGNHR 127
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L + FNY R +I++A K + + + + + + VPDPDL+IRTG
Sbjct: 128 LIFNVCFNYGGRWDIAQAAKKVA-------SSGEPITELALDRAMALAHVPDPDLLIRTG 180
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE R+S+FLLWQ AYSE F + WP+F A+ + R+RRFG S +
Sbjct: 181 GELRISNFLLWQAAYSELHFSDKLWPEFDEAALDEAIAVFRTRERRFGQTSAQ 233
>gi|302326429|gb|ADL25630.1| di-trans,poly-cis-decaprenylcistransferase [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 236
Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats.
Identities = 97/228 (42%), Positives = 139/228 (60%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA +RGL R GHRKG E + V + ++++T++ FS NW RP
Sbjct: 6 RHVAIIMDGNGRWARSRGLERFLGHRKGTESTIDAVEVGVNLKLEHMTLYVFSSENWGRP 65
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E+ L+ L+ + K L + N+K+ VIGN + + L+ A D+T NTG+
Sbjct: 66 SKEVDYLMNLLIEMVVKEIPDLMEKNVKLTVIGNMNRIPEKPRASLQSAIDKTANNTGMQ 125
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L +A +Y R EI A K+I ++ +G + +++ + AK+L PDPDLIIRTGGE
Sbjct: 126 LNLAISYGGRQEIVEATKSIAAEVAAGKLSIDEINDEIFAKHLYLKGAPDPDLIIRTGGE 185
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLS++LLWQ AYSEF WPDF++E F A+ +N R+RRFG +
Sbjct: 186 FRLSNYLLWQAAYSEFYVTNTLWPDFTKEEFMKAVEFFNTRERRFGKV 233
>gi|307329118|ref|ZP_07608285.1| undecaprenyl diphosphate synthase [Streptomyces violaceusniger Tu
4113]
gi|306885313|gb|EFN16332.1| undecaprenyl diphosphate synthase [Streptomyces violaceusniger Tu
4113]
Length = 278
Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats.
Identities = 86/235 (36%), Positives = 133/235 (56%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P H+ +MDGNGRWA RGLPR GH+ G V +++ E+G+KNL+++AF
Sbjct: 28 KIPGELVPTHVACVMDGNGRWAKERGLPRTEGHKVGEGVVLDVLKGCLEMGVKNLSLYAF 87
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + +++ + +++R G L + L+ A++Q
Sbjct: 88 STENWKRSPDEVRFLMNFNRDVIRRRRDEMDAMGVRIRWAGRMPKLWKSVAQELQVAQEQ 147
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N + ++ NY R EI+ A K + +D+ SG + V+ AKYL D+PD D
Sbjct: 148 TKDNDAMTMYFCMNYGGRAEIADAAKALAEDVRSGRLDPSKVNEKTFAKYLYYPDMPDVD 207
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R GE+R S++L+WQ AY+E V+ WPDF R + A +Y RDRRFGG
Sbjct: 208 LFLRPSGEQRTSNYLIWQSAYAEMVYQDVLWPDFDRRDLWRACLEYASRDRRFGG 262
>gi|330993377|ref|ZP_08317312.1| Undecaprenyl pyrophosphate synthase [Gluconacetobacter sp. SXCC-1]
gi|329759407|gb|EGG75916.1| Undecaprenyl pyrophosphate synthase [Gluconacetobacter sp. SXCC-1]
Length = 253
Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats.
Identities = 98/231 (42%), Positives = 136/231 (58%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+S P H+ IIMDGNGRWA+ RGLP AGHR G + V AA G+ +T++AFS N
Sbjct: 20 ASLPGHVAIIMDGNGRWASTRGLPLLAGHRAGADAVQRTVRAAISRGVGWVTLYAFSSEN 79
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRR E+++L L++ +L+ L + + +R IG+ DI + AE T N
Sbjct: 80 WRRAPGEVADLTGLLRYYLRHKVAELSREGVCLRFIGDLARFPVDIQEEARRAETVTAAN 139
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T L L +A +Y R +I +A + Q + G + D+D + A L T+ +PDPDL++R
Sbjct: 140 TRLVLVLALSYGGRADIVQAAIRLAQAVGRGERAATDIDEATFAGALLTAGMPDPDLVVR 199
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
T GE RLS+FLLWQ AY+E VF+ WPDF F LN Y+ R+RRFG
Sbjct: 200 TSGECRLSNFLLWQSAYAELVFLDTPWPDFDETHFDTVLNIYSRRERRFGA 250
>gi|326791506|ref|YP_004309327.1| undecaprenyl diphosphate synthase [Clostridium lentocellum DSM
5427]
gi|326542270|gb|ADZ84129.1| undecaprenyl diphosphate synthase [Clostridium lentocellum DSM
5427]
Length = 238
Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats.
Identities = 94/236 (39%), Positives = 140/236 (59%), Gaps = 2/236 (0%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M + P+HI +IMDGNGRWA RGLPR GHR+G + I+ A ++G+K LT++AFS
Sbjct: 1 MSNRKIPEHIAVIMDGNGRWAKERGLPRNEGHRRGTKTLESIIKHAEKIGVKYLTVYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS--LDDDILCVLKEAED 122
NW+RP E++ L+ L + +L + + R IG+ + + I + + E+
Sbjct: 61 TENWKRPEEEVAGLMNLFERYLDNHIKKASGDMNRFRAIGDLEATVIPKRIKEKVIQLEE 120
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T+ TG+ +AFNY RDEI RA K I + ++ + D++ YLDT +P+P
Sbjct: 121 MTKDKTGICFNMAFNYGGRDEIVRACKKIAEQVKQNKLDIADINEVCFEDYLDTKGMPEP 180
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DL+IRT GE R S+FL WQ++Y+EF F WPDF+ + A++ +N R RRFG
Sbjct: 181 DLLIRTSGEMRTSNFLPWQLSYTEFYFASCLWPDFNTKELDKAIDAFNERQRRFGK 236
>gi|312143674|ref|YP_003995120.1| undecaprenyl diphosphate synthase [Halanaerobium sp. 'sapolanicus']
gi|311904325|gb|ADQ14766.1| undecaprenyl diphosphate synthase [Halanaerobium sp. 'sapolanicus']
Length = 239
Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats.
Identities = 97/232 (41%), Positives = 142/232 (61%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
PP +I IIMDGNGRWA R L R GH++G++ +IV AA+ +K+LT++AFS NW+
Sbjct: 3 PPQNIAIIMDGNGRWAKKRKLARREGHKEGVKTLKKIVKYAAKKNVKSLTVYAFSTENWK 62
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP SE++ L+ L+K +++ L +K+ +G + +L ++ ++ E ++R N
Sbjct: 63 RPKSEVNFLLALMKKTMREEVDELLAEGVKINFLGRKDALSKKLIKEIELIEIKSRKNNN 122
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L IAFNY R EI A K +F D + + ++ YL D+ + +L+IRTG
Sbjct: 123 LVLNIAFNYGGRAEIVDAAKKLFLDYQDNNFDLDELSCEDFGDYLYQQDLKNIELLIRTG 182
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
GEKRLS+FLLWQ AY+E F +YWPDF F AL + R+RRFGGL+
Sbjct: 183 GEKRLSNFLLWQAAYAELYFTDKYWPDFGEADFDLALKDFKKRERRFGGLND 234
>gi|226227178|ref|YP_002761284.1| undecaprenyl pyrophosphate synthetase [Gemmatimonas aurantiaca
T-27]
gi|226090369|dbj|BAH38814.1| undecaprenyl pyrophosphate synthetase [Gemmatimonas aurantiaca
T-27]
Length = 258
Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 94/241 (39%), Positives = 143/241 (59%), Gaps = 1/241 (0%)
Query: 1 MVASMM-SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
++A + + P HI IIMDGNGRWA R +PR GHR G++ E+V A E G++ L+
Sbjct: 17 LLARIRVHGAVPRHIAIIMDGNGRWARERHMPRAFGHRSGMKAVREVVEGALEAGVEWLS 76
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
+FAFS NW+RP +E+S L+ L++ ++ + L + ++V V G+ L ++
Sbjct: 77 LFAFSQENWQRPETEVSALMSLLEEYIAREAAELAQQGVRVYVHGDLSRLTPAAANAVRR 136
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV 179
+QT L L + +Y R E+ RA + + D+ +G + + + I+ L T+
Sbjct: 137 VMEQTVTGNRLGLNLFISYGGRAELVRATRQLAADVAAGRLTADAITEDEISARLYTAGC 196
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDPDL+IRT GE+RLS+FLLWQVAY+E YWPDF R + A++ + RDRRFG +
Sbjct: 197 PDPDLLIRTSGEQRLSNFLLWQVAYAELFISSLYWPDFDRHALYGAISDFQRRDRRFGRV 256
Query: 240 S 240
S
Sbjct: 257 S 257
>gi|224437221|ref|ZP_03658198.1| hypothetical protein HcinC1_04597 [Helicobacter cinaedi CCUG 18818]
Length = 237
Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 97/235 (41%), Positives = 142/235 (60%), Gaps = 1/235 (0%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
++++ P HI IIMDGNGRWA +G R GH++G +V EI A I LT++AFS
Sbjct: 3 LNNALPQHIAIIMDGNGRWAKQQGKKRTQGHKEGAKVVQEITQWCANQKIPFLTLYAFST 62
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP EI L+KL++ +LK+ + KNNI+ RVIG+ + + + E E T+
Sbjct: 63 ENWKRPKMEIDYLMKLLEKYLKEERTTYIKNNIRFRVIGDIDAFSTPLKNAIFELEHLTQ 122
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQ-DIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+T L +A NY S +EI+R + + S + + LI LDT+ +P+ D+
Sbjct: 123 NHTNLTQILALNYGSHNEIARTFLKLANSQAQRLSKLTTQEVTELINANLDTATLPNVDM 182
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRTGGEKR+S+FLLWQ +Y+E F P WPDF+ L++++ R RRFGGL
Sbjct: 183 LIRTGGEKRISNFLLWQASYAELFFTPTLWPDFTANELDSLLSEFSQRQRRFGGL 237
>gi|75760868|ref|ZP_00740882.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|74491652|gb|EAO54854.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar israelensis ATCC 35646]
Length = 222
Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 96/222 (43%), Positives = 140/222 (63%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA R +P K ++ +I A+++ +K LT++AFS NW+RP E+
Sbjct: 1 MDGNGRWAKRRAMPLLRDIMKVCKLVKKITKFASKLNVKVLTLYAFSTENWKRPKKEVDY 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+KL + FL L + N++VRVIG + L +++A + T+ NTGL L A N
Sbjct: 61 LMKLPEEFLGTFLPELIEENVQVRVIGQKDRLPTHTRRAMEKAMEDTKENTGLILNFALN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y SRDEI A++++ +D E G + S +V +++ YL TS +PDP+L+IRT GE R+S+F
Sbjct: 121 YGSRDEIVSAVQHMMKDNEEGKIRSEEVSEEMLSSYLMTSSLPDPELLIRTSGELRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+LWQ+AYSEF F YWPDF E +A+ + R RRFGG+
Sbjct: 181 MLWQIAYSEFWFTDVYWPDFKEEHLLNAITDFQHRGRRFGGV 222
>gi|168012250|ref|XP_001758815.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689952|gb|EDQ76321.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 247
Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 101/241 (41%), Positives = 141/241 (58%), Gaps = 3/241 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + +S P H+ IIMDGN RWA RG+P GH G+ E+V A G++ LT+
Sbjct: 5 LAEELDASVMPKHVAIIMDGNSRWAERRGMPASMGHEAGVRSLKEVVKLAHTWGVEVLTV 64
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW RP E+ L+ L ++ LK SL K N++V +G+ L + ++
Sbjct: 65 FAFSTENWLRPKMEVDFLMMLFENVLKNELSSLAKENVRVHCMGDLTLLPVTLRDMVTTI 124
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
ED T+ NTGL IA +YS R +I+ A + + +E+G + S D+ + I + L TS +
Sbjct: 125 EDHTKHNTGLKFCIALSYSGRYDIANACQRLAARVETGELSSSDITEASIEEELKTSWLG 184
Query: 181 D---PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
D PDL+IRT GE+RLS+FLLWQ AY+EF F+ WPDF F AL Y R+RRFG
Sbjct: 185 DVRNPDLLIRTSGEQRLSNFLLWQTAYTEFYFVDILWPDFGVVQFREALLAYQNRNRRFG 244
Query: 238 G 238
Sbjct: 245 K 245
>gi|88855028|ref|ZP_01129693.1| undecaprenyl pyrophosphate synthetase [marine actinobacterium
PHSC20C1]
gi|88815556|gb|EAR25413.1| undecaprenyl pyrophosphate synthetase [marine actinobacterium
PHSC20C1]
Length = 270
Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 92/235 (39%), Positives = 140/235 (59%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S+ + P+HI I+MDGNGRWA ARGL R GH+ G ++VA A ++G+K+++++AF
Sbjct: 26 SLPKGAVPEHIAIVMDGNGRWANARGLTRVEGHKAGEASLLDVVAGAIQIGVKHVSVYAF 85
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW R E+ L+ + L + L + ++VR G R L ++ L+ AE
Sbjct: 86 STENWSRSPEEVRFLMGFNRDVLHRRRDQLNEWGVRVRWAGRRPRLWTSVIKELQFAEKL 145
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T N L L + NY R+EI+ A+++I D+ +G + V LI + L +PD D
Sbjct: 146 TDKNDTLTLTMCVNYGGRNEIADAVRSIADDVAAGKLKPSAVTEKLIQRRLYQPQLPDVD 205
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R+ GE+R+S+F+ WQ AY+E VF+ WPDF+RE ++A+ Y R RRFGG
Sbjct: 206 LFVRSSGEQRMSNFMPWQSAYAEMVFLDTLWPDFTREQLWYAIEIYAKRTRRFGG 260
>gi|323143564|ref|ZP_08078241.1| di-trans,poly-cis-decaprenylcistransferase [Succinatimonas hippei
YIT 12066]
gi|322416627|gb|EFY07284.1| di-trans,poly-cis-decaprenylcistransferase [Succinatimonas hippei
YIT 12066]
Length = 247
Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 102/234 (43%), Positives = 135/234 (57%), Gaps = 2/234 (0%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ IIMDGNGRWA RG+ R GH++G + AAA++G+ +LT+FAFS NW
Sbjct: 12 KIPRHVAIIMDGNGRWAEQRGMSRVKGHKEGAAAVRRTIEAAAKLGVHSLTLFAFSSENW 71
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP +E+S L++L LKK L KNNIK +VIG+ L + + + E+ T NT
Sbjct: 72 KRPQTEVSALMELFSLSLKKETPVLHKNNIKAKVIGDVLRFNSGLQKAIHVLEETTAGNT 131
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL L IA NY R +I A + I I G V +D++ K L D DL+IRT
Sbjct: 132 GLELNIAANYGGRWDIVEACRKILDQISCGQVTKNDLNEEYFNKQLSLPQ--DIDLLIRT 189
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GGE R+S+FLLWQ AYSE WPDF E A ++ R+RRFG S +
Sbjct: 190 GGEMRISNFLLWQCAYSELYVTDVLWPDFDEEELTKAFLFFSGRERRFGMTSAQ 243
>gi|157147394|ref|YP_001454713.1| undecaprenyl pyrophosphate synthase [Citrobacter koseri ATCC
BAA-895]
gi|157084599|gb|ABV14277.1| hypothetical protein CKO_03192 [Citrobacter koseri ATCC BAA-895]
Length = 229
Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 85/223 (38%), Positives = 132/223 (59%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA +G R GH+ G + V+ AA GI LT++AFS NW RP E+S
Sbjct: 1 MDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIDALTLYAFSSENWNRPAQEVSA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L L SL ++N+++R+IG+ + + ++++E T NTGL L IA N
Sbjct: 61 LMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQDRIRKSEALTAQNTGLTLNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I + ++ + + ++ G + +D ++ + + ++ DL+IRTGGE R+S+F
Sbjct: 121 YGGRWDIVQGVRQLAEQVQEGLLRPDQIDEEMLNQKICMHELAPVDLVIRTGGEHRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LLWQ+AY+E F WPDF + F AL+ + R+RRFGG
Sbjct: 181 LLWQIAYAELYFTDVLWPDFDEQDFEGALHAFANRERRFGGTE 223
>gi|32476379|ref|NP_869373.1| undecaprenyl pyrophosphate synthetase [Rhodopirellula baltica SH 1]
gi|42559764|sp|Q7UF53|UPPS_RHOBA RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|32446924|emb|CAD78830.1| undecaprenyl pyrophosphate synthetase [Rhodopirellula baltica SH 1]
gi|327539010|gb|EGF25644.1| undecaprenyl pyrophosphate synthetase [Rhodopirellula baltica WH47]
Length = 244
Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 93/236 (39%), Positives = 153/236 (64%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
++S + P H+ IIMDGNGRWA AR LPR GHR+G+ + A+E+ + LT++ S
Sbjct: 6 LLSMNLPRHVAIIMDGNGRWAQARDLPRIEGHRRGVTTVRTVTEMASELKLDALTLYCLS 65
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP +E+ L+ L++ +L + +++ N+++R IG R L D++L + + + +
Sbjct: 66 SENWKRPQAELDFLMHLLQQYLVEERRTIRDQNMRLRFIGRRDRLSDEVLKEIAKTQAVS 125
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NTG L +A +Y RDE++R + + Q + G ++ SL+ + LDT+ +PD DL
Sbjct: 126 ENNTGTELVLAVDYGGRDELTRMTRQLAQQVRDGERSIDEITESLVDESLDTAGLPDVDL 185
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
+IRTGG+ R+S++LLWQ++Y+E F P+ WP+F R+ F AL+++ R RRFGGL+
Sbjct: 186 MIRTGGDIRISNYLLWQISYAELYFTPKCWPEFERDDFQAALDEFAGRQRRFGGLN 241
>gi|319762179|ref|YP_004126116.1| undecaprenyl diphosphate synthase [Alicycliphilus denitrificans BC]
gi|330826009|ref|YP_004389312.1| undecaprenyl diphosphate synthase [Alicycliphilus denitrificans
K601]
gi|317116740|gb|ADU99228.1| undecaprenyl diphosphate synthase [Alicycliphilus denitrificans BC]
gi|329311381|gb|AEB85796.1| undecaprenyl diphosphate synthase [Alicycliphilus denitrificans
K601]
Length = 245
Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 94/241 (39%), Positives = 133/241 (55%), Gaps = 7/241 (2%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+++ ++ P HI I+MDGNGRWA R LPR AGHR+G+E V A G+ LT+F
Sbjct: 1 MSTTAQTAIPHHIAIVMDGNGRWATRRFLPRLAGHRQGVESLRRCVRACVARGVGVLTVF 60
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+S L+ L+ L + L ++ +++ +G + L D + L++AE
Sbjct: 61 AFSSENWNRPADEVSGLMDLLAKALAREVPQLSRDGVRLHFVGEKSGLSDKVRDGLRQAE 120
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T N L L + FNY R +I Q + + S + + + VPD
Sbjct: 121 AATAGNDRLVLNVCFNYGGRWDI-------AQAAAQLAARGEPITESSLHAAMGMAHVPD 173
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL+IRTGGEKR+S+FLLWQ AY+E F WPDF A+ Y R+RRFG S+
Sbjct: 174 PDLLIRTGGEKRISNFLLWQAAYTELYFSDRLWPDFDEAALDEAIADYAARERRFGRTSE 233
Query: 242 K 242
+
Sbjct: 234 Q 234
>gi|226307199|ref|YP_002767159.1| undecaprenyl pyrophosphate synthase [Rhodococcus erythropolis PR4]
gi|226186316|dbj|BAH34420.1| undecaprenyl pyrophosphate synthase [Rhodococcus erythropolis PR4]
Length = 252
Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats.
Identities = 89/236 (37%), Positives = 141/236 (59%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P H+ ++MDGNGRWA RGLPR AGH +G V + V E+G++ L+ +AFS
Sbjct: 17 LQTELIPRHVALVMDGNGRWAQERGLPRTAGHERGEAVLMDTVCGCIEMGVEWLSAYAFS 76
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+R E+ L+ + +++ + + ++VR G + L ++ L+ AE+ T
Sbjct: 77 TENWKRSPDEVRFLMGFNRDVIRRRRDEMNEMGVRVRWAGRKPRLWASVIKELEIAEELT 136
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NT +NL + NY R EI+ A+K I + + +G + + + +AKYLD D+PD DL
Sbjct: 137 KNNTVMNLTMCVNYGGRAEIADAVKEIAKRVAAGEINPDKITEATVAKYLDEPDMPDVDL 196
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
+R GE+R S+FL+WQ AY+E V+ + +PDF R + A +Y RDRRFGG+
Sbjct: 197 FLRPSGEQRTSNFLIWQSAYAEMVYQEKLFPDFDRRDLWAACVEYASRDRRFGGVK 252
>gi|296101343|ref|YP_003611489.1| undecaprenyl pyrophosphate synthase [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295055802|gb|ADF60540.1| undecaprenyl pyrophosphate synthase [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 229
Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats.
Identities = 88/226 (38%), Positives = 134/226 (59%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA +G R GH+ G + V+ AA GI LT++AFS NW RP E++
Sbjct: 1 MDGNGRWAKRQGKIRAFGHKAGAKSVRRAVSFAANNGIDALTLYAFSSENWNRPAQEVTA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L L SL ++N+++RVIG + + +++AE T NTGL L IA N
Sbjct: 61 LMELFVWALDSEVKSLHRHNVRLRVIGETSRFNSRLQERIRKAEALTENNTGLTLNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I + ++++ + ++ G + +D ++K + +++ DL+IRTGGE R+S+F
Sbjct: 121 YGGRWDIIQGVRHLAEQVQEGLLRPDQIDEDALSKQICMNELAPVDLVIRTGGEHRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
LLWQ+AY+E F WPDF + F AL+ + R+RRFGG G
Sbjct: 181 LLWQIAYAELYFTDVLWPDFDEQDFEGALHAFANRERRFGGTEPGG 226
>gi|293609254|ref|ZP_06691556.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292827706|gb|EFF86069.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325122520|gb|ADY82043.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase)
[Acinetobacter calcoaceticus PHEA-2]
Length = 250
Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats.
Identities = 91/233 (39%), Positives = 142/233 (60%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IIMDGN R+A + + GHR+G V + IV + GI+ LT+FAFS NW
Sbjct: 9 LPKHVAIIMDGNNRFAKKNQMQKGDGHREGKNVLDPIVEHCKKTGIRALTVFAFSSENWN 68
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ L+KL++ + + +KK NI +R IG+R L ++ ++++AE QT +
Sbjct: 69 RPQFEVDLLMKLLEETIHEQIPRMKKFNIALRFIGDRSRLPSHLVALMEDAEQQTAHHNT 128
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ L IA +Y +I+ A K + + + G + ++ L KY+ +D+P DL+IRTG
Sbjct: 129 MTLTIAVSYGGMWDIANAAKQVAEAVSRGEFGADQINVDLFEKYVSLNDLPAVDLLIRTG 188
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
G+ R+S+FLLWQ AY+E F WP+F+ + F HALN ++ R+RRFG S++
Sbjct: 189 GDYRISNFLLWQAAYAELYFTDTLWPEFTVQEFDHALNVFSGRERRFGKTSEQ 241
>gi|57234844|ref|YP_181119.1| undecaprenyl diphosphate synthase [Dehalococcoides ethenogenes 195]
gi|57225292|gb|AAW40349.1| undecaprenyl diphosphate synthase [Dehalococcoides ethenogenes 195]
Length = 236
Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats.
Identities = 97/234 (41%), Positives = 146/234 (62%), Gaps = 4/234 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
++++PP+HI IIMDGNGRWA RGL R GH+ G+E +I+ +G+K +T+++FS
Sbjct: 7 INNTPPNHIAIIMDGNGRWAERRGLSRLDGHKAGLENARQIIRHLNSLGVKYVTLYSFST 66
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP +EI L LI + L +NN++++ +G+ L + L + +T
Sbjct: 67 ENWKRPDTEIKGLFGLINDIMSSYIPELVENNVRLKHLGHLDKLPSVLKDKLADLLSRTS 126
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
NTGL L +AF+Y RDEI +A+K + +D + + + ++ YL T+ +P+ DL+
Sbjct: 127 RNTGLTLCLAFDYGGRDEIIQAVKKLVKD----GLAADKITENVFDGYLYTAGIPEADLV 182
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRTGGE RLS+FLLWQ AYSE F WPDF + +A++ +N R RRFGGL
Sbjct: 183 IRTGGEMRLSNFLLWQSAYSELYFSEVMWPDFGEKEIDNAISAFNQRQRRFGGL 236
>gi|300788451|ref|YP_003768742.1| undecaprenyl pyrophosphate synthetase [Amycolatopsis mediterranei
U32]
gi|299797965|gb|ADJ48340.1| undecaprenyl pyrophosphate synthetase [Amycolatopsis mediterranei
U32]
Length = 271
Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats.
Identities = 90/240 (37%), Positives = 140/240 (58%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P H+ ++MDGNGRWA RGLPR GH++G V ++ + A E+G+K L+++AF
Sbjct: 29 EIPRELVPKHVALVMDGNGRWANQRGLPRIEGHKRGEAVMIDVASGAVELGVKWLSVYAF 88
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + +++ L +++R G R L ++ L+ AE++
Sbjct: 89 STENWKRSPEEVRFLMGFNRDTIRRQVDYLGSIGVRIRWAGRRPKLWASVIKELQAAEEK 148
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NT LN+ + NY R E+ A++ I QD+ +G + V+ I KYL D+PD D
Sbjct: 149 TKDNTALNMTMCVNYGGRAELGDAMQRIAQDVAAGKLNPDKVNEKTIGKYLYQPDMPDVD 208
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
L +R GE+R S+FLLWQ AY+E V+ +PDF R + A ++ RDRRFGG +
Sbjct: 209 LFLRPSGEQRTSNFLLWQSAYAEMVYQDTLFPDFDRTHLWRACLEFAKRDRRFGGAVDQA 268
>gi|15837652|ref|NP_298340.1| undecaprenyl pyrophosphate synthase [Xylella fastidiosa 9a5c]
gi|42560017|sp|Q9PEH8|UPPS_XYLFA RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|9105994|gb|AAF83860.1|AE003942_4 undecaprenyl pyrophosphate synthetase [Xylella fastidiosa 9a5c]
Length = 255
Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats.
Identities = 91/233 (39%), Positives = 135/233 (57%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI IIMDGNGRWA R PR GHR G++ V E GIK LT+FAFS NW
Sbjct: 12 LPRHIAIIMDGNGRWAERRSRPRTTGHRAGVKAAMRTVDFCLEKGIKMLTLFAFSSENWN 71
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E++ L+++ +G L + ++VR IG R D ++ + +AE T N
Sbjct: 72 RPADEVNFLMEMSIKLFGRGIEELHRRGVQVRFIGERKRFDIALVEHMTKAEHLTANNQR 131
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L +A +Y R +I+ A + + QD+ +G + +D L+ +++ +D+P PD+ IRT
Sbjct: 132 LILSLAVSYGGRQDITMAARALAQDVAAGRLKPEQIDEDLLGQHMALADLPPPDMFIRTS 191
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
G R+S+FLLWQ+AY+E F WP+F+ + AL+ Y R+RRFG + +
Sbjct: 192 GVIRISNFLLWQIAYTELWFTDVMWPEFNSTVLQQALDDYASRERRFGLTNAQ 244
>gi|71892058|ref|YP_277788.1| undecaprenyl pyrophosphate synthetase [Candidatus Blochmannia
pennsylvanicus str. BPEN]
gi|71796164|gb|AAZ40915.1| undecaprenyl pyrophosphate synthetase [Candidatus Blochmannia
pennsylvanicus str. BPEN]
Length = 250
Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats.
Identities = 91/236 (38%), Positives = 133/236 (56%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+++ S+ P H+ IIMDGNGRWA RG R GH+ G V A LT++
Sbjct: 10 LSTFSSNLLPRHVAIIMDGNGRWARRRGKLRIVGHQAGFNAVRRAVHFAVNYRFDALTLY 69
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP EI L++L L L KNNIK+R+IG+ ++ + +E
Sbjct: 70 AFSSENWKRPDKEIDSLMQLFSHALNNEIDVLHKNNIKLRIIGDINRFSGELQKNIHRSE 129
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T N+GL L IA NY R +I + +K + ++ G + + +D + K + ++
Sbjct: 130 KLTSNNSGLTLNIAANYGGRWDIIQGVKQLATQVQQGILTPNQIDEDALCKCICMHELAP 189
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRTGGE R+S+FLLWQ+AY+E F WPDF+ +F A+N + R+RRFG
Sbjct: 190 VDLVIRTGGEHRISNFLLWQIAYAELFFTDVLWPDFNDVIFKRAVNTFMKRERRFG 245
>gi|169824424|ref|YP_001692035.1| undecaprenyl pyrophosphate synthase [Finegoldia magna ATCC 29328]
gi|167831229|dbj|BAG08145.1| undecaprenyl pyrophosphate synthase [Finegoldia magna ATCC 29328]
Length = 234
Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats.
Identities = 90/239 (37%), Positives = 138/239 (57%), Gaps = 7/239 (2%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
++++ P HI IIMDGNGRWA R PR GH +G++ ++V + +GIK L+++
Sbjct: 3 LSNLDQDRLPKHIAIIMDGNGRWATNRNKPRVFGHNEGMKRVVDVVENSLNIGIKYLSLY 62
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP EI L++++ ++ L +K+ ++G+ L ++ ++ A
Sbjct: 63 AFSTENWKRPQKEIDFLMQILIKYIDDQLNKLVTQGVKINILGDISVLPKKVIQKIEYAL 122
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
D T+ N L L IA NY SR EI A+ N ++ + + + + L T + PD
Sbjct: 123 DSTKDNNKLILNIAINYGSRQEILLAVNNAIENGQI-------LTENEFSNLLYTRNQPD 175
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IR GGEKRLS+FLL+Q++Y+E F YWPDF + A+ Y R+RRFGGL
Sbjct: 176 VDLLIRPGGEKRLSNFLLYQMSYAELYFSDTYWPDFKLDSLVDAIYWYQNRNRRFGGLK 234
>gi|296387841|ref|ZP_06877316.1| undecaprenyl pyrophosphate synthetase [Pseudomonas aeruginosa PAb1]
Length = 238
Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats.
Identities = 92/228 (40%), Positives = 138/228 (60%)
Query: 15 GIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSE 74
IIMDGN RWA R LP AGH+ G++ ++ AE G++ LT+FAFS NW+RP E
Sbjct: 2 AIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAEAGVEVLTLFAFSSENWQRPADE 61
Query: 75 ISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFI 134
+S L++L L++ L +N I++R+IG+R ++ ++EAE T NT L +
Sbjct: 62 VSALMELFLVALRREVRKLDENGIRLRIIGDRTRFHPELQAAMREAEAATAGNTRFLLQV 121
Query: 135 AFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRL 194
A NY + +I +A + + ++++ G + D+ + L+ L T D P PDL IRTGGE R+
Sbjct: 122 AANYGGQWDIVQAAQRLAREVQGGHLAVDDISAELLQGCLVTGDQPLPDLCIRTGGEHRI 181
Query: 195 SDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
S+FLLWQ+AY+E F +WPDF AL ++ R RRFG S++
Sbjct: 182 SNFLLWQLAYAELYFSDLFWPDFKHAAMRAALADFSKRQRRFGKTSEQ 229
>gi|321222195|gb|EFX47267.1| Undecaprenyl pyrophosphate synthetase [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|322616045|gb|EFY12962.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322620828|gb|EFY17688.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322623821|gb|EFY20658.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322627269|gb|EFY24060.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322630576|gb|EFY27340.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322638206|gb|EFY34907.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322645525|gb|EFY42052.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322648181|gb|EFY44648.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322657132|gb|EFY53415.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322657502|gb|EFY53774.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322663822|gb|EFY60022.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322666655|gb|EFY62833.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322676502|gb|EFY72573.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322679406|gb|EFY75451.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322686267|gb|EFY82251.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323193447|gb|EFZ78655.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323197531|gb|EFZ82666.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323201200|gb|EFZ86269.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323209595|gb|EFZ94528.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323212153|gb|EFZ96977.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323216458|gb|EGA01184.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323225913|gb|EGA10133.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323228546|gb|EGA12675.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323236841|gb|EGA20917.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323239659|gb|EGA23706.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323242294|gb|EGA26323.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323249956|gb|EGA33852.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323252386|gb|EGA36237.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323255669|gb|EGA39422.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323262894|gb|EGA46444.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323265380|gb|EGA48876.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323271833|gb|EGA55251.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
Length = 229
Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats.
Identities = 85/223 (38%), Positives = 132/223 (59%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA +G R GH+ G + V+ AA GI LT++AFS NW RP E+S
Sbjct: 1 MDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIDALTLYAFSSENWNRPAQEVSA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L L SL ++N+++R+IG+ + + ++++E T NTGL L IA N
Sbjct: 61 LMELFVWALDSEVKSLHRHNVRLRIIGDISRFNSRLQERIRKSEALTAHNTGLTLNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I + ++ + + +++G + +D + + + ++ DL+IRTGGE R+S+F
Sbjct: 121 YGGRWDIVQGVRQLAEQVQAGVLRPDQIDEERLGQQICMHELAPVDLVIRTGGEHRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LLWQ+AY+E F WPDF + F AL+ + R+RRFGG
Sbjct: 181 LLWQIAYAELYFTDVLWPDFDEQDFEGALHAFANRERRFGGTE 223
>gi|319947866|ref|ZP_08022053.1| undecaprenyl pyrophosphate synthase [Dietzia cinnamea P4]
gi|319438472|gb|EFV93405.1| undecaprenyl pyrophosphate synthase [Dietzia cinnamea P4]
Length = 233
Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats.
Identities = 93/231 (40%), Positives = 135/231 (58%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ ++MDGNGRWA RGLPR GH++G V ++V E+GI L+ +AFS NW+
Sbjct: 1 MPRHVALVMDGNGRWAQERGLPRTEGHKRGEAVLMDVVEGCIEMGIPYLSAYAFSTENWK 60
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ L+ + L++ + ++VR G R L ++ L+EAE+ TR NT
Sbjct: 61 RSPEEVRFLMGFNRDVLRRRRDEMHALGVRVRWAGRRPRLWGSVIKELEEAEELTRDNTV 120
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ L + NY R EI A ++I + + +G + D+ A +LD D+PD DL +R
Sbjct: 121 MTLAMCVNYGGRAEIVDAARDIARRVAAGELGPDDITEENFADFLDEPDMPDVDLFLRPS 180
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
GE R S+FLLWQ AY+EFVF +PDF R + A +Y RDRRFGG++
Sbjct: 181 GELRTSNFLLWQSAYAEFVFQDTLFPDFDRRDLWAACLEYAERDRRFGGVA 231
>gi|317121845|ref|YP_004101848.1| undecaprenyl diphosphate synthase [Thermaerobacter marianensis DSM
12885]
gi|315591825|gb|ADU51121.1| undecaprenyl diphosphate synthase [Thermaerobacter marianensis DSM
12885]
Length = 377
Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats.
Identities = 94/229 (41%), Positives = 137/229 (59%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
P H+ IIMDGNGRWA RG PR AGHR G++ EIV A ++G++ LT++AFS N
Sbjct: 52 GRMPRHVAIIMDGNGRWAQRRGWPRVAGHRAGVQSVREIVRFAGDIGLEVLTLYAFSTEN 111
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP +E+ L+ L+ +++ L +N +++RVIG+ L + A + TR N
Sbjct: 112 WRRPPAEVRALMGLLVEHIRRDLDELHRNGVQIRVIGDPEGLPPLPRREVLRAVETTRHN 171
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+ L +A NY +R E++RA + + G + +D +++ L T+ +PDPDL+IR
Sbjct: 172 RRMILVLALNYGARWELARAARQLAARAARGELDPEAIDEAMLGSQLQTAGLPDPDLLIR 231
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
GE R+S+FLLWQ+AYSE F P WPDF A+ Y R+RRF
Sbjct: 232 PSGEWRISNFLLWQIAYSELWFTPVAWPDFRPVHLVEAIEDYARRERRF 280
>gi|255320442|ref|ZP_05361623.1| di-trans,poly-cis-decaprenylcistransferase [Acinetobacter
radioresistens SK82]
gi|262378338|ref|ZP_06071495.1| di-trans,poly-cis-decaprenylcistransferase [Acinetobacter
radioresistens SH164]
gi|255302414|gb|EET81650.1| di-trans,poly-cis-decaprenylcistransferase [Acinetobacter
radioresistens SK82]
gi|262299623|gb|EEY87535.1| di-trans,poly-cis-decaprenylcistransferase [Acinetobacter
radioresistens SH164]
Length = 249
Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats.
Identities = 93/233 (39%), Positives = 138/233 (59%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P+H+ IIMDGN R+A + + GHR+G V + IV E G+K LT+FAFS NW
Sbjct: 9 LPEHVAIIMDGNNRFAKKNQMQKGEGHREGKNVLDPIVECCVEQGVKALTVFAFSSENWN 68
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ L+ L++ + ++K +I +R IG+R L + ++ +AE +T +
Sbjct: 69 RPQFEVELLMSLLEETIHDQMPRMEKFDICLRFIGDRSRLPAHLRELMLQAEQRTANFST 128
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ L IA +Y +I+ A K I QD + + D++ L +Y D+P DL+IRTG
Sbjct: 129 MTLVIAVSYGGMWDIAEAAKQIAQDAVNQKIQIEDINVDLFGQYASLGDLPPVDLLIRTG 188
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
G+ RLS+FLLWQ AY+E F P WP+F+ F HALN +N R+RRFG S++
Sbjct: 189 GDYRLSNFLLWQAAYAELYFTPTLWPEFTVNEFNHALNIFNSRERRFGKTSEQ 241
>gi|302380483|ref|ZP_07268948.1| di-trans,poly-cis-decaprenylcistransferase [Finegoldia magna
ACS-171-V-Col3]
gi|303233647|ref|ZP_07320301.1| di-trans,poly-cis-decaprenylcistransferase [Finegoldia magna
BVS033A4]
gi|302311426|gb|EFK93442.1| di-trans,poly-cis-decaprenylcistransferase [Finegoldia magna
ACS-171-V-Col3]
gi|302495081|gb|EFL54833.1| di-trans,poly-cis-decaprenylcistransferase [Finegoldia magna
BVS033A4]
Length = 234
Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats.
Identities = 90/239 (37%), Positives = 138/239 (57%), Gaps = 7/239 (2%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
++++ P HI IIMDGNGRWA R PR GH +G++ ++V + +GIK L+++
Sbjct: 3 LSNLDQDRLPKHIAIIMDGNGRWATNRNKPRVFGHNEGMKRVVDVVENSLNIGIKYLSLY 62
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP EI L++++ ++ L +K+ ++G+ L ++ ++ A
Sbjct: 63 AFSTENWKRPQKEIDFLMQILIKYIDDQLNKLVTQGVKINILGDISVLPKKVIQKIEYAL 122
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
D T+ N L L IA NY SR EI A+ N ++ + + + + L T + PD
Sbjct: 123 DSTKDNNKLILNIAINYGSRQEILLAVNNAIENGQI-------LTENEFSNLLYTRNQPD 175
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IR GGEKRLS+FLL+Q++Y+E F YWPDF + A+ Y R+RRFGGL
Sbjct: 176 VDLLIRPGGEKRLSNFLLYQMSYAELYFSDTYWPDFKLDSLIDAIYWYQNRNRRFGGLK 234
>gi|304314442|ref|YP_003849589.1| undecaprenyl pyrophosphate synthase [Methanothermobacter
marburgensis str. Marburg]
gi|302587901|gb|ADL58276.1| predicted undecaprenyl pyrophosphate synthase [Methanothermobacter
marburgensis str. Marburg]
Length = 255
Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats.
Identities = 86/238 (36%), Positives = 134/238 (56%), Gaps = 3/238 (1%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARG-LPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
++ P H+ IIMDGN R++ +G + GH+KGIE +++ ++GI+ +T +
Sbjct: 17 RNLKRERMPRHVAIIMDGNRRYSRLQGSVDPIEGHKKGIETLEKVLDWCVDLGIEIITAY 76
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
AFS N++RP +E+ L+KL K + + KN +KV+ +G L +D+ ++
Sbjct: 77 AFSTENFKRPENEVKGLMKLFKENFEAIASNKKIHKNRVKVKAVGKLELLPEDVRKAIEV 136
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV 179
AE T + + IA Y R EI A + I +D+ +G + D+D +I + L T+ +
Sbjct: 137 AERSTEGYSDRLVNIAIGYDGRQEILDAARKIAEDVRAGRIDPEDIDEDMINRNLYTAGL 196
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DP LIIRT GE+RLS FLLWQ +YSE F WP+ + F A+ Y R+RRFG
Sbjct: 197 EDPHLIIRTSGEERLSGFLLWQSSYSELYFCDSLWPELRKVDFLRAIRSYQQRERRFG 254
>gi|116749217|ref|YP_845904.1| undecaprenyl diphosphate synthase [Syntrophobacter fumaroxidans
MPOB]
gi|116698281|gb|ABK17469.1| Undecaprenyl pyrophosphate synthetase [Syntrophobacter fumaroxidans
MPOB]
Length = 248
Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats.
Identities = 99/239 (41%), Positives = 137/239 (57%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P H+ IIMDGNGRWA R R GH +G E+V E+GI LT++AF
Sbjct: 3 RLDLNRLPRHVSIIMDGNGRWANLRLANRVFGHNEGANSVREVVKCCLELGIPYLTLYAF 62
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP SE++ L L++ FLK F L I+VR +G+ + ++L L+ +
Sbjct: 63 SKENWQRPESEVTALWHLLRRFLKSEFADLVSRRIRVRHLGDPDDIPMEVLNELRHVVEA 122
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T L L +A NY R EI RA + D+ +G S + ++YL T+D+PDPD
Sbjct: 123 TADFDRLVLSLAINYGGRQEILRAARKYAGDVLAGRAESDALSQEEFSRYLFTTDLPDPD 182
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
LIIRTGGE R+S+FLLWQ+AY+E WPDF F AL ++ R+RRFG S +
Sbjct: 183 LIIRTGGEYRVSNFLLWQLAYAELYITATLWPDFREPQFHEALAEFQRRERRFGKTSDQ 241
>gi|261416242|ref|YP_003249925.1| undecaprenyl diphosphate synthase [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261372698|gb|ACX75443.1| undecaprenyl diphosphate synthase [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 236
Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats.
Identities = 96/228 (42%), Positives = 138/228 (60%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA +RGL R GH KG E + V + ++++T++ FS NW RP
Sbjct: 6 RHVAIIMDGNGRWARSRGLERFLGHCKGTESTIDAVEVGVNLKLEHMTLYVFSSENWGRP 65
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E+ L+ L+ + K L + N+K+ VIGN + + L+ A D+T NTG+
Sbjct: 66 SKEVDYLMNLLIEMVVKEIPDLMEKNVKLTVIGNMNRIPEKPRASLQSAIDKTANNTGMQ 125
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L +A +Y R EI A K+I ++ +G + +++ + AK+L PDPDLIIRTGGE
Sbjct: 126 LNLAISYGGRQEIVEATKSIAAEVAAGKLSIDEINDEIFAKHLYLKGAPDPDLIIRTGGE 185
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLS++LLWQ AYSEF WPDF++E F A+ +N R+RRFG +
Sbjct: 186 FRLSNYLLWQAAYSEFYVTNTLWPDFTKEEFMKAVEFFNTRERRFGKV 233
>gi|262404590|ref|ZP_06081145.1| undecaprenyl pyrophosphate synthetase [Vibrio sp. RC586]
gi|262349622|gb|EEY98760.1| undecaprenyl pyrophosphate synthetase [Vibrio sp. RC586]
Length = 232
Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats.
Identities = 87/225 (38%), Positives = 141/225 (62%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA A+G PR GH+ G+ + ++ +A +GIK +T+FAFS NWRRP E+
Sbjct: 1 MDGNGRWAKAQGKPRVFGHKNGVAAVRKTISTSARLGIKAVTLFAFSSENWRRPEEEVGV 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L + L L KNN+++RVIG++ + + + +AE+ T NTG+ + IA N
Sbjct: 61 LMELFITVLSTEIKKLHKNNLRLRVIGDKSRFSERLQSKIAQAEELTANNTGMVVNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y + +I +A K + + + G + D+D ++ ++L +D+P+ DL+IRT GE R+S+F
Sbjct: 121 YGGQWDILQATKALAEKAKQGDLQPADIDEAMFKQHLTMADLPEVDLLIRTSGECRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+LWQ+AY+E F P +WP+F A+ + R+RRFG ++
Sbjct: 181 MLWQLAYAEMYFTPVFWPEFDENCLIEAVTWFVNRERRFGCTGEQ 225
>gi|262193810|ref|YP_003265019.1| undecaprenyl diphosphate synthase [Haliangium ochraceum DSM 14365]
gi|262077157|gb|ACY13126.1| undecaprenyl diphosphate synthase [Haliangium ochraceum DSM 14365]
Length = 294
Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats.
Identities = 89/234 (38%), Positives = 136/234 (58%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HIGIIMDGNGRWA RGLPR GHR G + +IV AA ++ ++ LT++AFS NW
Sbjct: 12 RLPRHIGIIMDGNGRWAQQRGLPRLEGHRVGADSVRDIVRAARQLDVEALTLYAFSAQNW 71
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E++ L+ L++ ++ + N+I++ IG+ + + L + N
Sbjct: 72 ARPPEEVAGLMGLLRDYIVGERQEIMDNDIRLLAIGDIERMPSFVRDPLDALVADSANNR 131
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+ L +A +Y R+ I RA K + + G + ++D +K L T ++P DL+IRT
Sbjct: 132 SMRLVLALSYGGRESIVRAAKRAIEAVRGGRMNPDELDIDGFSKLLPTGELPPLDLLIRT 191
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+R+S+FLLW++AY+E +F WPDF R+ + AL Y R+RRFG +
Sbjct: 192 SGEQRISNFLLWELAYAELIFTDVPWPDFRRQQLYDALASYAHRERRFGLTGAQ 245
>gi|21242170|ref|NP_641752.1| undecaprenyl pyrophosphate synthase [Xanthomonas axonopodis pv.
citri str. 306]
gi|42559996|sp|Q8PMK9|UPPS_XANAC RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|21107586|gb|AAM36288.1| undecaprenyl pyrophosphate synthetase [Xanthomonas axonopodis pv.
citri str. 306]
Length = 257
Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats.
Identities = 94/238 (39%), Positives = 138/238 (57%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
++S++ P HI IIMDGNGRWA R PR GHR G N + E G+ LT+FAFS
Sbjct: 9 VLSAAVPRHIAIIMDGNGRWAQRRRRPRVIGHRAGARAVNRTIDFCLEKGVSALTLFAFS 68
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP E+ L+KL L + L++ ++VR IG+R + + AE T
Sbjct: 69 SENWGRPQDEVDALMKLFLHALDREVEELQRRGVQVRFIGDRSRFAAPLRDRMAGAERST 128
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N+ L L IA +Y R +I+ A + + +D+ +G + +D +L++ + +D+P PDL
Sbjct: 129 AANSRLVLSIAASYGGRQDIASAARALAEDVAAGRLQPEQIDEALLSSRVALADLPAPDL 188
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTGG+ R+S+FLLWQ+AY+E F WP+F + AL+ Y R+RRFG S +
Sbjct: 189 FIRTGGDTRISNFLLWQLAYTELWFTETLWPEFDAGVLQQALDDYAGRERRFGLTSAQ 246
>gi|220931614|ref|YP_002508522.1| undecaprenyl diphosphate synthase [Halothermothrix orenii H 168]
gi|219992924|gb|ACL69527.1| undecaprenyl diphosphate synthase [Halothermothrix orenii H 168]
Length = 240
Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats.
Identities = 102/235 (43%), Positives = 147/235 (62%), Gaps = 1/235 (0%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P H+ IIMDGNGRWA +GLPR AGHR+G++ +I+ A E+ I LT++AFS NW
Sbjct: 2 NIPSHVAIIMDGNGRWAQEKGLPRYAGHREGVKTLKKIIKKAGEMKIPCLTVYAFSTENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RRP E+ L+KL K LK L N++V +IG R L ++ ++ E TR
Sbjct: 62 RRPRKEVDFLMKLFKETLKNESQELASKNVRVNIIGRRNGLSKSLINAIEYIEKITRDKN 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
G+ L IAFNY R EI ++K + QD+ + + ++D + +KYL P+ +L+IRT
Sbjct: 122 GMELNIAFNYGGRAEIVDSVKKVVQDV-NQGLALDELDENNFSKYLYNPRWPEVELLIRT 180
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
GGE R+S+++LWQ+AY+E FI + WPDF+ E A+ + RDRRFGGL + G
Sbjct: 181 GGEMRISNYMLWQLAYAELYFIDKCWPDFNGEDLEKAIKVFQQRDRRFGGLPEVG 235
>gi|225619144|ref|YP_002720370.1| undecaprenyl pyrophosphate synthetase [Brachyspira hyodysenteriae
WA1]
gi|225213963|gb|ACN82697.1| undecaprenyl pyrophosphate synthetase [Brachyspira hyodysenteriae
WA1]
Length = 240
Score = 271 bits (694), Expect = 5e-71, Method: Composition-based stats.
Identities = 106/234 (45%), Positives = 141/234 (60%), Gaps = 3/234 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P H+ IIMDGNGRWA + R GHR G E IV A+ E+ IK LT++AFS NW
Sbjct: 7 NIPAHVAIIMDGNGRWAKSHNKSRSLGHRAGSENVINIVEASCELNIKYLTLYAFSTENW 66
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT---R 125
+RP E L KL+K F KK L NNI V+ IG+ + D + ++E E +T
Sbjct: 67 KRPEEEKKALFKLLKEFYKKEIKRLISNNILVKHIGDISAFPKDTIETIEETEKETLEKC 126
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N L + +A NY RDE+ AIKNI D + + ++D + I YL T +PDPD I
Sbjct: 127 KNPILTVILALNYGFRDELKNAIKNICHDTINNKIDIENIDENFIQNYLYTKGIPDPDFI 186
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRT GE RLS+FL++Q +YSE F WPDFS+E F A+ +Y+ R+RR+GGL
Sbjct: 187 IRTSGESRLSNFLMYQASYSELYFTDILWPDFSKEDFKKAIEEYSNRNRRYGGL 240
>gi|300704227|ref|YP_003745830.1| undecaprenyl pyrophosphate synthetase (di-trans,
poly-cis-decaprenylcistransferase) [Ralstonia
solanacearum CFBP2957]
gi|299071891|emb|CBJ43220.1| undecaprenyl pyrophosphate synthetase (di-trans,
poly-cis-decaprenylcistransferase) [Ralstonia
solanacearum CFBP2957]
Length = 259
Score = 271 bits (694), Expect = 5e-71, Method: Composition-based stats.
Identities = 98/241 (40%), Positives = 145/241 (60%), Gaps = 2/241 (0%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+A ++ P H+ IIMDGNGRWA R LPR AGH +G++ +V AA G++ LT+F
Sbjct: 7 LAVPDTADTPRHVAIIMDGNGRWATERHLPRMAGHSRGLDAVRAVVEAAGNRGVRYLTLF 66
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP E+S L+KL + L++ L ++ ++RV+G+ + + I +++EAE
Sbjct: 67 AFSSENWRRPAEEVSFLMKLFMTALRREVSKLHESGFRLRVVGDLSAFNPRIQLLIREAE 126
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T N+GL + IA NY R +I +A++ + D + + I+ YL + +
Sbjct: 127 AKTAANSGLTVTIAANYGGRWDILQAMRALVAD--QPDIAPEAITEEAISPYLALAYAAE 184
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL IRTGGE+R+S+F+LWQ+AYSE F YWPDF A Y R+RRFG S
Sbjct: 185 PDLFIRTGGEQRISNFMLWQLAYSELYFTERYWPDFDAAEMDRAFAWYRNRERRFGRTSA 244
Query: 242 K 242
+
Sbjct: 245 Q 245
>gi|260772226|ref|ZP_05881142.1| undecaprenyl pyrophosphate synthetase [Vibrio metschnikovii CIP
69.14]
gi|260611365|gb|EEX36568.1| undecaprenyl pyrophosphate synthetase [Vibrio metschnikovii CIP
69.14]
Length = 232
Score = 271 bits (694), Expect = 5e-71, Method: Composition-based stats.
Identities = 92/225 (40%), Positives = 144/225 (64%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA A+G PR GH+ G+ + V+ AA++GI+ +T+FAFS NWRRP E+
Sbjct: 1 MDGNGRWAKAQGKPRIFGHKNGVAAVRKTVSTAAKLGIRAVTLFAFSSENWRRPEEEVGV 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L L L KNN+++R+IG+ + + + +AE T+ NTG+ + IA N
Sbjct: 61 LMELFLRVLSTEVKKLHKNNLRLRIIGDTSRFSERLQSKIAQAEALTQHNTGMVINIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y + +I++A+++I I + D++ +LIA++L +D+P+ DL+IRT GE R+S+F
Sbjct: 121 YGGKWDITQAMRHIALKISRDELSVTDINETLIAEHLTMADLPEVDLLIRTSGECRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
LLWQ+AY+E F P YWP+F E A+ + R+RRFG ++
Sbjct: 181 LLWQLAYAEMYFTPVYWPEFGEESLIEAVTWFVNRERRFGCTGEQ 225
>gi|295098666|emb|CBK87756.1| Undecaprenyl pyrophosphate synthetase [Enterobacter cloacae subsp.
cloacae NCTC 9394]
Length = 229
Score = 271 bits (694), Expect = 5e-71, Method: Composition-based stats.
Identities = 86/226 (38%), Positives = 134/226 (59%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA +G R GH+ G + V+ AA GI LT++AFS NW RP E++
Sbjct: 1 MDGNGRWAKRQGKIRAFGHKAGAKSVRRAVSFAANNGIDALTLYAFSSENWNRPAQEVTA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L L SL ++N+++R+IG + + +++AE T NTGL L IA N
Sbjct: 61 LMELFVWALDSEVKSLHRHNVRLRIIGETSRFNSRLQERIRKAEALTENNTGLTLNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I + ++++ + ++ G + +D +++ + +++ DL+IRTGGE R+S+F
Sbjct: 121 YGGRWDIIQGVRHLAEQVQEGLLRPDQIDEEALSQQICMNELAPVDLVIRTGGEHRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
LLWQ+AY+E F WPDF + F AL+ + R+RRFGG G
Sbjct: 181 LLWQIAYAELYFTDVLWPDFDEQDFEGALHAFANRERRFGGTEPGG 226
>gi|134098080|ref|YP_001103741.1| undecaprenyl diphosphate synthase [Saccharopolyspora erythraea NRRL
2338]
gi|291007461|ref|ZP_06565434.1| undecaprenyl diphosphate synthase [Saccharopolyspora erythraea NRRL
2338]
gi|133910703|emb|CAM00816.1| undecaprenyl diphosphate synthase [Saccharopolyspora erythraea NRRL
2338]
Length = 290
Score = 271 bits (694), Expect = 5e-71, Method: Composition-based stats.
Identities = 93/240 (38%), Positives = 134/240 (55%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ P H+ I+MDGNGRWA RGLPR GH++G V E+ A E+G+K L+++AF
Sbjct: 28 ALPPELVPQHVAIVMDGNGRWANERGLPRIEGHKRGEAVVLELARGAIEIGVKWLSLYAF 87
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + + + L ++VR G + L ++ L++AE +
Sbjct: 88 STENWKRSPEEVRFLMGFNRDVIARRVDELDGLGVRVRWAGRKPKLWRSVVKQLQDAEVR 147
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
TR N +NL + NY R E+ A + I + G + VD +AKYL ++PD D
Sbjct: 148 TRNNEVMNLTMCVNYGGRAEVGDAAREIARLAAQGKINPEKVDEQTVAKYLYQPEMPDVD 207
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
L IR GE+R S+FLLWQ AY+E VF +PD R + A QY RDRRFGG +
Sbjct: 208 LFIRPSGEQRTSNFLLWQSAYAELVFQDTLFPDVDRTHLWRACEQYARRDRRFGGAIDRA 267
>gi|308048673|ref|YP_003912239.1| undecaprenyl pyrophosphate synthetase [Ferrimonas balearica DSM
9799]
gi|307630863|gb|ADN75165.1| Undecaprenyl pyrophosphate synthetase [Ferrimonas balearica DSM
9799]
Length = 250
Score = 271 bits (694), Expect = 5e-71, Method: Composition-based stats.
Identities = 96/237 (40%), Positives = 143/237 (60%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+S S P HI IIMDGNGRWA A+G PR GHR G++ +VA E +++LT+FAFS
Sbjct: 9 ISVSTPRHIAIIMDGNGRWAEAQGQPRVMGHRAGVKSVRNVVALCRERQVESLTLFAFSS 68
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+ L++L + L++ LKKN++++++IG+ D+ + + +AE T
Sbjct: 69 ENWHRPEREVKLLMRLFTTVLRREVKLLKKNDVRLKIIGDVSGFDEKLQARILQAEADTA 128
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
TG+ L IA NY R ++ A + + + G + D+D +L+ ++ SD + DL+
Sbjct: 129 ECTGMVLNIAANYGGRWDVVNAARKLTELALQGEIAVSDIDEALLDRFTSLSDQAEVDLL 188
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTGGE+R+S+F+LWQ AYSE F WPDF AL+ + R RRFG S +
Sbjct: 189 IRTGGEQRISNFVLWQCAYSELFFSDTLWPDFGEAALQEALDAFACRQRRFGLTSAQ 245
>gi|229493210|ref|ZP_04387002.1| di-trans,poly-cis-decaprenylcistransferase [Rhodococcus
erythropolis SK121]
gi|229319941|gb|EEN85770.1| di-trans,poly-cis-decaprenylcistransferase [Rhodococcus
erythropolis SK121]
Length = 272
Score = 271 bits (694), Expect = 5e-71, Method: Composition-based stats.
Identities = 89/236 (37%), Positives = 141/236 (59%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P H+ ++MDGNGRWA RGLPR AGH +G V + V E+G++ L+ +AFS
Sbjct: 37 LQTELIPRHVALVMDGNGRWAQERGLPRTAGHERGEAVLMDTVCGCIEMGVEWLSAYAFS 96
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+R E+ L+ + +++ + + ++VR G + L ++ L+ AE+ T
Sbjct: 97 TENWKRSPDEVRFLMGFNRDVIRRRRDEMNEMGVRVRWAGRKPRLWASVIKELEIAEELT 156
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NT +NL + NY R EI+ A+K I + + +G + + + +AKYLD D+PD DL
Sbjct: 157 KNNTVMNLTMCVNYGGRAEIADAVKEIAKRVAAGEINPDKITEATVAKYLDEPDMPDVDL 216
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
+R GE+R S+FL+WQ AY+E V+ + +PDF R + A +Y RDRRFGG+
Sbjct: 217 FLRPSGEQRTSNFLIWQSAYAEMVYQEKLFPDFDRRDLWAACVEYASRDRRFGGVK 272
>gi|169633331|ref|YP_001707067.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase)
[Acinetobacter baumannii SDF]
gi|169152123|emb|CAP01022.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase)
[Acinetobacter baumannii]
Length = 250
Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats.
Identities = 90/233 (38%), Positives = 141/233 (60%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IIMDGN R+A + + GHR+G V + IV + G++ LT+FAFS NW
Sbjct: 9 LPQHVAIIMDGNNRFAKKNQMQKGDGHREGKNVLDPIVEHCVKTGVRALTVFAFSSENWN 68
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ L+KL++ + + +KK NI +R IG+R L ++ ++++AE QT +
Sbjct: 69 RPQYEVDLLMKLLEETIHEQIPRMKKFNIALRFIGDRSRLPSHLVALMEDAEQQTAHHDA 128
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ L IA +Y +I+ A K + Q + G + + ++ L Y+ +D+P DL+IRTG
Sbjct: 129 MTLTIAVSYGGMWDIANAAKQVAQAVSRGEIDADQINVDLFENYVSLNDLPAVDLLIRTG 188
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+ R+S+FLLWQ AY+E F WP+F+ E F HALN ++ R+RRFG S++
Sbjct: 189 RDFRISNFLLWQAAYAELYFTDTLWPEFTVEEFDHALNVFSGRERRFGKTSEQ 241
>gi|28198251|ref|NP_778565.1| undecaprenyl pyrophosphate synthetase [Xylella fastidiosa
Temecula1]
gi|182680888|ref|YP_001829048.1| undecaprenyl pyrophosphate synthase [Xylella fastidiosa M23]
gi|42559961|sp|Q87EH7|UPPS_XYLFT RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|28056321|gb|AAO28214.1| undecaprenyl pyrophosphate synthetase [Xylella fastidiosa
Temecula1]
gi|182630998|gb|ACB91774.1| undecaprenyl diphosphate synthase [Xylella fastidiosa M23]
gi|307579356|gb|ADN63325.1| undecaprenyl pyrophosphate synthase [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 255
Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats.
Identities = 91/233 (39%), Positives = 135/233 (57%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI IIMDGNGRWA R PR GHR G++ V E GIK LT+FAFS NW
Sbjct: 12 LPRHIAIIMDGNGRWAERRSRPRTTGHRAGVKAAMRTVDFCLEKGIKMLTLFAFSSENWN 71
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E++ L+++ +G L + ++VR IG R D ++ + +AE T N
Sbjct: 72 RPADEVNFLMEMSIKLFGRGIEELHRRGVQVRFIGERKRFDIALVEHMTKAEHLTASNQR 131
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L +A +Y R +I+ A + + QD+ +G + +D L+ +++ +D+P PD+ IRT
Sbjct: 132 LILSLAVSYGGRQDITMAARALAQDVAAGRLKPEQIDEDLLGQHMALADLPPPDMFIRTS 191
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
G R+S+FLLWQ+AY+E F WP+F+ + AL+ Y R+RRFG + +
Sbjct: 192 GVIRISNFLLWQIAYTELWFTDVMWPEFNSTVLQQALDDYASRERRFGLTNAQ 244
>gi|120610507|ref|YP_970185.1| undecaprenyl pyrophosphate synthetase [Acidovorax citrulli AAC00-1]
gi|120588971|gb|ABM32411.1| Undecaprenyl pyrophosphate synthetase [Acidovorax citrulli AAC00-1]
Length = 247
Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats.
Identities = 94/240 (39%), Positives = 132/240 (55%), Gaps = 7/240 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
S S + P H+ I+MDGNGRWA R LPR AGH++G+E E G+ LT+FA
Sbjct: 4 MSAASPAVPHHVAIVMDGNGRWATRRFLPRLAGHKQGVEALKRCARDCVERGVAVLTVFA 63
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RP E+S L+ L+ L + L+K+ +++ +G R +L + + L +AE
Sbjct: 64 FSSENWNRPADEVSGLMDLLAKALAREVPQLQKDGVRLHFVGERSTLSEKVRAGLAQAEA 123
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NT L L + FNY R +I Q + + + + + + + VPDP
Sbjct: 124 VTAHNTRLVLNVCFNYGGRWDI-------AQAASALAARGEPITEASLHTAMGLAHVPDP 176
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL+IRTGGE R+S+FLLWQ AYSE F WPDF A+ Y R+RRFG S++
Sbjct: 177 DLVIRTGGEMRISNFLLWQCAYSELYFSDRLWPDFDGAALDQAIAAYGARERRFGKTSEQ 236
>gi|320449279|ref|YP_004201375.1| di-trans,poly-cis-decaprenylcistransferase [Thermus scotoductus
SA-01]
gi|320149448|gb|ADW20826.1| di-trans,poly-cis-decaprenylcistransferase [Thermus scotoductus
SA-01]
Length = 263
Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats.
Identities = 89/244 (36%), Positives = 139/244 (56%), Gaps = 6/244 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + P H+G+I+DGN R+A A GL GH G++ E++ E+GIK +T+
Sbjct: 20 LLKEVKGGPVPKHLGLILDGNRRYARALGLSPVKGHEFGVQKAYEVLEWCLEMGIKTVTV 79
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+ FS +N++RP E+ EL++L ++ + + ++ ++VR IG R +++L L+
Sbjct: 80 WVFSTDNFKRPPEEVEELMRLFVREAERMAEDHRILEHQVRVRFIGRREGFSEEVLRALE 139
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCS----HDVDSSLIAKYL 174
E +T+ + G+ L IA Y R+EI A+K + + + + IA++L
Sbjct: 140 RLEAKTQHHQGMVLNIALGYGGREEIVDAVKRLLLEAWKRGLSPKEVAEGLTPEDIARHL 199
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
T+ +PDPD IIRT GE RLS FLLWQ AYSEF F WP+F + F AL Y R+R
Sbjct: 200 YTAGLPDPDFIIRTSGEIRLSGFLLWQSAYSEFYFADVLWPEFRKIDFLRALRSYQARER 259
Query: 235 RFGG 238
RFG
Sbjct: 260 RFGR 263
>gi|262370223|ref|ZP_06063549.1| undecaprenyl pyrophosphate synthetase [Acinetobacter johnsonii
SH046]
gi|262314565|gb|EEY95606.1| undecaprenyl pyrophosphate synthetase [Acinetobacter johnsonii
SH046]
Length = 250
Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats.
Identities = 87/242 (35%), Positives = 137/242 (56%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M S + P H+ IIMDGN R+A + + GHR+G V + IV + I+ LT+
Sbjct: 1 MTDSEDKLTLPKHVAIIMDGNNRFAKKNAMQKGDGHREGKNVLDPIVEHCRKKNIQALTV 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW+RP +E+ L+KL++ + + + + + +R IG+R L + ++ A
Sbjct: 61 FAFSSENWKRPQAEVDLLMKLLEDTIHEQLPRMHQYQMSLRFIGDRSKLSPQLRDLMLHA 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E T + L IA +Y +++ A K I ++S ++ +D + Y+ SD+P
Sbjct: 121 EQDTANFDKMTLTIAISYGGMWDMANAAKQIALAVQSQALDPEQIDEHVFGHYVSLSDLP 180
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRTGG+ RLS+F+LWQ AY+E F P WP+FS E F AL + R+RRFG +
Sbjct: 181 AVDLLIRTGGDFRLSNFMLWQAAYAELYFTPTLWPEFSVEEFDDALAVFGGRERRFGKTT 240
Query: 241 KK 242
++
Sbjct: 241 EQ 242
>gi|326388634|ref|ZP_08210227.1| undecaprenyl pyrophosphate synthetase [Novosphingobium
nitrogenifigens DSM 19370]
gi|326206885|gb|EGD57709.1| undecaprenyl pyrophosphate synthetase [Novosphingobium
nitrogenifigens DSM 19370]
Length = 235
Score = 271 bits (693), Expect = 7e-71, Method: Composition-based stats.
Identities = 101/232 (43%), Positives = 145/232 (62%), Gaps = 8/232 (3%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
P H+ IIMDGNGRWA R LPR GH++G+E V AA ++G+ +T++AFS
Sbjct: 11 QGRGPRHVAIIMDGNGRWAKRRHLPRVLGHQRGVEAVRRTVRAAVDLGLSAITLYAFSTE 70
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+S L+ L+K F+ +NNI+++VIG+ + DI+ +++ A +T
Sbjct: 71 NWRRPEDEVSALMGLLKHFILADIEEFARNNIRLKVIGDYKAFAPDIVALIEGALQRTAG 130
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTGL + +A NY S+DEI RA + ++ ++ IA LDT+D+P DLII
Sbjct: 131 NTGLTMAVALNYGSQDEIVRAARAAAAKG--------EITTATIAAELDTADMPPLDLII 182
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
RT GE RLS+FL+WQ AY+E +F+ WPDF R+ A+ +Y R+RRFGG
Sbjct: 183 RTSGEVRLSNFLMWQAAYAEMLFLDVLWPDFGRDHLEAAIAEYTRRERRFGG 234
>gi|300933270|ref|ZP_07148526.1| hypothetical protein CresD4_04325 [Corynebacterium resistens DSM
45100]
Length = 258
Score = 271 bits (693), Expect = 7e-71, Method: Composition-based stats.
Identities = 90/238 (37%), Positives = 134/238 (56%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+S+ P HI I+MDGNGRWA RGLPR GH++G V +V E+G+ L+ +A
Sbjct: 21 SSIPQELVPKHIAIVMDGNGRWAQERGLPRTEGHKRGEGVLLNLVEECLELGVNYLSAYA 80
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRR E+ L+ + L++ L +++R +G R L ++ L++AE
Sbjct: 81 FSTENWRRSTEEVRFLMGFNRDVLRRQRDYLDSLGVRIRWVGRRPRLWRSVIAELEKAER 140
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
QT NT + L + NY R EI A + I D+ G++ + + S A YLD D+PD
Sbjct: 141 QTANNTAMTLAMCVNYGGRAEIVDAARAIADDVARGALKARQITESTFANYLDEPDMPDV 200
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL +R GE+R S+FL WQ Y+E V+ +PD++ A+ ++ RDRRFGG+
Sbjct: 201 DLFLRPSGEQRTSNFLPWQSTYAEMVYQDVLFPDYTPNDLRAAVLEFAKRDRRFGGVK 258
>gi|262039197|ref|ZP_06012517.1| di-trans,poly-cis-decaprenylcistransferase [Leptotrichia
goodfellowii F0264]
gi|261746813|gb|EEY34332.1| di-trans,poly-cis-decaprenylcistransferase [Leptotrichia
goodfellowii F0264]
Length = 231
Score = 271 bits (693), Expect = 7e-71, Method: Composition-based stats.
Identities = 97/234 (41%), Positives = 141/234 (60%), Gaps = 6/234 (2%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ IIMDGNGRWA +G R GHR+G +I+ + ++G+K LT++AFS NW
Sbjct: 4 KIPKHVAIIMDGNGRWAKEKGKIRLEGHRQGAINLEKIIEHSVKIGVKYLTVYAFSTENW 63
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP E++ L++L +L SLKK I++ V G + ++ + +L ++E E
Sbjct: 64 KRPEKEVNGLMELFAKYLDTKKKSLKKQGIRLLVTGTKENISEKLLKKIEETEKYLEDCE 123
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+ IAFNY R EI AI I +D + VD A+YL ++PDP+L+IRT
Sbjct: 124 KMIFNIAFNYGGRKEIIDAINKIIKDKK------ETVDEKEFARYLYRPEIPDPELVIRT 177
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE R+S+FLLW++AYSEF YWPDF+ E + A+ +N RDRR+GGL+ K
Sbjct: 178 SGEFRISNFLLWEIAYSEFYVTDVYWPDFTPEEYDKAILAFNKRDRRYGGLNVK 231
>gi|163840336|ref|YP_001624741.1| undecaprenyl pyrophosphate synthetase [Renibacterium salmoninarum
ATCC 33209]
gi|162953812|gb|ABY23327.1| undecaprenyl pyrophosphate synthetase [Renibacterium salmoninarum
ATCC 33209]
Length = 282
Score = 271 bits (692), Expect = 7e-71, Method: Composition-based stats.
Identities = 92/234 (39%), Positives = 140/234 (59%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P H+ I+MDGNGRWA RGL R GH+ G ++VA A +GIK+LT+FAFS
Sbjct: 37 IPAELVPAHVAIVMDGNGRWANQRGLTRIEGHKAGEPALLDVVAGAINLGIKHLTVFAFS 96
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRR E+ L+ + L++ L +++R G R L ++ L+ A++QT
Sbjct: 97 TENWRRSPDEVRFLMGFNRDVLRRQRDQLDAWGVRIRWSGRRPRLWASVVKELEVAQEQT 156
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ N L L + NY + EI A+ +I Q++ +G + + I K+L D+P+ DL
Sbjct: 157 KDNDTLTLTMCVNYGGQAEIVDAVTSIAQEVAAGKLKPSGISEKTIQKHLYQPDLPEVDL 216
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+R+ GE+R+S+F+LWQ AY+EFVF+ WPD R +HA++ Y RDRR+GG
Sbjct: 217 FLRSSGEQRISNFVLWQSAYAEFVFLDTLWPDVDRRTLWHAVDVYAQRDRRYGG 270
>gi|302528828|ref|ZP_07281170.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. AA4]
gi|302437723|gb|EFL09539.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. AA4]
Length = 272
Score = 271 bits (692), Expect = 8e-71, Method: Composition-based stats.
Identities = 89/240 (37%), Positives = 139/240 (57%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P H+ ++MDGNGRWA RGLPR GH++G V ++ + A E+G+K L+++AF
Sbjct: 29 EIPPDLVPKHVALVMDGNGRWANQRGLPRIEGHKRGEAVMIDVASGAVELGVKWLSVYAF 88
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + +++ L +++R G R L ++ L+ AE++
Sbjct: 89 STENWKRSPEEVRFLMGFNRDTIRRQVDYLGSIGVRIRWAGRRPKLWASVIKELQIAEEK 148
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NT LN+ + NY R E+ A++ I QD+ +G + +D I KYL ++PD D
Sbjct: 149 TKNNTKLNMTMCVNYGGRAELGDAMRRIGQDVAAGKINPDKIDERTIGKYLYQPEMPDVD 208
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
L +R GE+R S+FLLWQ AY+E V+ +PDF R + A + RDRRFGG +
Sbjct: 209 LFLRPSGEQRTSNFLLWQSAYAEMVYQDTLFPDFDRTHLWQACLDFAKRDRRFGGAVDQA 268
>gi|150021159|ref|YP_001306513.1| undecaprenyl diphosphate synthase [Thermosipho melanesiensis BI429]
gi|149793680|gb|ABR31128.1| undecaprenyl diphosphate synthase [Thermosipho melanesiensis BI429]
Length = 225
Score = 271 bits (692), Expect = 8e-71, Method: Composition-based stats.
Identities = 91/229 (39%), Positives = 127/229 (55%), Gaps = 6/229 (2%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
HI IMDGNGRWA R PR GH G E+V A+ G+K T +AFS NW+RP
Sbjct: 3 KHIAFIMDGNGRWAQKRNKPRMYGHYVGAYKIEEVVRWCAKRGVKYTTFYAFSTENWKRP 62
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E++ + L++S + + + + K +K+ G L +I + KE E++T+ N +
Sbjct: 63 KGEVNFIFGLLQSKISEFYERMNKEGVKLVFSGRLEELGKNIYNICKEYEEKTKNNEKIV 122
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+ +A NY R EI A+K + + ++D K+L +VPDPDLIIRT GE
Sbjct: 123 VNMAINYGGRAEIVDAVKKFLEQRQK------EIDEETFRKFLYRPEVPDPDLIIRTSGE 176
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RLS+FL WQ AYSE F WPDFS + AL Y R+R+FGG+
Sbjct: 177 MRLSNFLTWQSAYSELYFTDVLWPDFSEDDLQKALEDYEKRNRKFGGIK 225
>gi|307718991|ref|YP_003874523.1| undecaprenyl pyrophosphate synthetase [Spirochaeta thermophila DSM
6192]
gi|306532716|gb|ADN02250.1| undecaprenyl pyrophosphate synthetase [Spirochaeta thermophila DSM
6192]
Length = 232
Score = 271 bits (692), Expect = 8e-71, Method: Composition-based stats.
Identities = 105/233 (45%), Positives = 142/233 (60%), Gaps = 5/233 (2%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+S P HIGIIMDGNGRWA RGLPR GH +G++ +V AAAE GI L+++ FS N
Sbjct: 5 TSLPRHIGIIMDGNGRWATRRGLPRYKGHEEGLKATKRVVKAAAERGIPYLSLYTFSTEN 64
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W+R E+S L+ L++ +LKK F ++ I++ GN L +I L + T
Sbjct: 65 WKRAQEEVSFLMGLVRRYLKKEFDFYREYGIRIVHSGNLEGLPREIRRDLLDVMRDTASF 124
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
TGL L IA NY RDEI RA+K ++ + ++ +YLD ++PDPDL+IR
Sbjct: 125 TGLTLNIALNYGGRDEILRAMKRWLEEGGAP-----ELTEESFRRYLDVPELPDPDLVIR 179
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
T GE+RLS+FL+WQ AY+E+ F P WPDFS F AL Y R R+FGG +
Sbjct: 180 TAGEQRLSNFLIWQAAYAEYYFTPVLWPDFSERDFDEALQDYASRTRKFGGTA 232
>gi|161504660|ref|YP_001571772.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160866007|gb|ABX22630.1| hypothetical protein SARI_02781 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 229
Score = 271 bits (692), Expect = 9e-71, Method: Composition-based stats.
Identities = 85/223 (38%), Positives = 132/223 (59%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA +G R GH+ G + V+ AA GI LT++AFS NW RP E+S
Sbjct: 1 MDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIDALTLYAFSSENWNRPAQEVSA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L L SL ++N+++R+IG+ + + ++++E T NTGL L IA N
Sbjct: 61 LMELFVWALDSEVKSLHRHNVRLRIIGDISRFNSRLQERIRKSEALTARNTGLTLNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I + ++ + + +++G + +D + + + ++ DL+IRTGGE R+S+F
Sbjct: 121 YGGRWDIVQGVRQLAEQVQAGVLRPDQIDEERLGQQICMHELAPVDLVIRTGGEHRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LLWQ+AY+E F WPDF + F AL+ + R+RRFGG
Sbjct: 181 LLWQIAYAELYFTDVLWPDFDEQDFEGALHAFANRERRFGGTE 223
>gi|307298260|ref|ZP_07578064.1| undecaprenyl diphosphate synthase [Thermotogales bacterium
mesG1.Ag.4.2]
gi|306916346|gb|EFN46729.1| undecaprenyl diphosphate synthase [Thermotogales bacterium
mesG1.Ag.4.2]
Length = 227
Score = 271 bits (692), Expect = 9e-71, Method: Composition-based stats.
Identities = 92/229 (40%), Positives = 133/229 (58%), Gaps = 6/229 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IMDGNGRWA RGL R GHRKG EV + A++GI+ +T++AFS NWRR
Sbjct: 4 PVHVAFIMDGNGRWAKKRGLERIEGHRKGAEVADAASHWCADLGIRYVTLYAFSTENWRR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L +L+ ++ S+ + +++R +G L ++ + + E++T + L
Sbjct: 64 PKEEVEFLFELMLLYISSKVGSMLEEGVRMRFMGRLNELPPELGDFVFQIENKTSMGKKL 123
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
++ +A NY R EI A+ I + + + IA L DVP+PDLIIRT G
Sbjct: 124 DVIVALNYGGRAEIVDAVNEILKIGK------EQISEEDIAMNLYLPDVPEPDLIIRTSG 177
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+RLS+FL WQ YSE F WPDF++E F A++ Y+ R RRFG L
Sbjct: 178 EERLSNFLTWQSVYSELFFTGTLWPDFTKEEFHRAVDDYSKRKRRFGAL 226
>gi|309389221|gb|ADO77101.1| Undecaprenyl pyrophosphate synthetase [Halanaerobium praevalens DSM
2228]
Length = 239
Score = 271 bits (692), Expect = 9e-71, Method: Composition-based stats.
Identities = 91/233 (39%), Positives = 143/233 (61%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P I IIMDGNGRWA R R AGH++G++ IV AA ++ +++LT++AFS NW
Sbjct: 2 NTPKSIAIIMDGNGRWAEKRNKSRSAGHKEGVKALKRIVKAAVDLKLESLTVYAFSTENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP +E++ L+ L+K +K L N +++ IG + +L +++ ++ E ++ N
Sbjct: 62 KRPKAEVNFLLTLMKRAMKNEVEELLANGVQINFIGRKDTLSKNLIKEIENIEKKSATNN 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
L L IAFNY R EI A +N+ + + + + +D + YL ++ D +L+IRT
Sbjct: 122 KLTLNIAFNYGGRAEIIDAARNLAKAYKENKLDLNQIDEKGFSNYLYNKNLKDVELLIRT 181
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
GGE RLS+FLLWQ AY+E F+ ++WPDF E A+ ++ R RRFGGL+
Sbjct: 182 GGELRLSNFLLWQSAYAELHFVDKFWPDFYAEDLKEAIKIFSQRTRRFGGLND 234
>gi|319943822|ref|ZP_08018103.1| di-trans,poly-cis-decaprenylcistransferase [Lautropia mirabilis
ATCC 51599]
gi|319743055|gb|EFV95461.1| di-trans,poly-cis-decaprenylcistransferase [Lautropia mirabilis
ATCC 51599]
Length = 256
Score = 270 bits (691), Expect = 9e-71, Method: Composition-based stats.
Identities = 98/238 (41%), Positives = 147/238 (61%), Gaps = 1/238 (0%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
++ S P HI +I+DGNGRWA R LPR AGHRKG+E V A G++ LT+FAFS
Sbjct: 12 VAGSVPRHIAVILDGNGRWATRRHLPRAAGHRKGVEAVRTTVEGCARRGVEFLTLFAFSS 71
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NWRRP E+S L++L S L++ L +N I++R++G+ + + ++ +AE +T
Sbjct: 72 ENWRRPADEVSLLMRLFLSALQREVALLDRNGIRLRIVGDLARFEPRLQKMIADAEARTA 131
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD-VDSSLIAKYLDTSDVPDPDL 184
NT + L IA NY R +I +A + ++ + V + V + +A +L + P+PDL
Sbjct: 132 QNTRMTLTIAANYGGRWDILQAGNALLRERAAKGVPADQPVTEAELASHLSLAYAPEPDL 191
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTGGE+R+S+FLLWQ+AY+E F +WP+F+ E A+ Y R+RRFG S +
Sbjct: 192 FIRTGGEQRISNFLLWQLAYTELYFCECFWPEFNDERLQEAIQWYGQRERRFGRTSVQ 249
>gi|284030391|ref|YP_003380322.1| undecaprenyl diphosphate synthase [Kribbella flavida DSM 17836]
gi|283809684|gb|ADB31523.1| undecaprenyl diphosphate synthase [Kribbella flavida DSM 17836]
Length = 274
Score = 270 bits (691), Expect = 9e-71, Method: Composition-based stats.
Identities = 83/234 (35%), Positives = 133/234 (56%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P H+ I+MDGNGRWA ARGL R GH+ G +++ E+G+K ++ +AFS
Sbjct: 33 LPAELVPQHVAIVMDGNGRWAKARGLARTEGHKAGEASLLDVIKGGIEIGVKYISAYAFS 92
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW R E+ L+ + + + L ++V G R L ++ L+ A+++T
Sbjct: 93 TENWARSPEEVRFLMGFNRDVIHRRRDELDAMGVRVVWSGRRPRLWKSVIDELEYAQERT 152
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NT + L NY R EI+ A+K I D+ +G + + + +A+ L +P+ DL
Sbjct: 153 KDNTTITLQFCVNYGGRAEIADAMKAIAHDVAAGRIKPDRITEATVARNLYAPGIPEVDL 212
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+R+ GE+R S+FL+WQ+AY+E VF+ WPDF R + A+ Y RDRR+GG
Sbjct: 213 FVRSSGEQRTSNFLVWQLAYAEMVFLDTLWPDFDRRDLWRAIEIYAQRDRRYGG 266
>gi|289432267|ref|YP_003462140.1| undecaprenyl diphosphate synthase [Dehalococcoides sp. GT]
gi|288945987|gb|ADC73684.1| undecaprenyl diphosphate synthase [Dehalococcoides sp. GT]
Length = 236
Score = 270 bits (691), Expect = 9e-71, Method: Composition-based stats.
Identities = 101/234 (43%), Positives = 142/234 (60%), Gaps = 4/234 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
++++PPDHI IIMDGNGRWA RGL R GH+ G+E ++ + +G+K +T+++FS
Sbjct: 7 INNTPPDHIAIIMDGNGRWAERRGLSRLEGHKAGLENARRVIRHLSSLGVKYVTLYSFST 66
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP +EI L LI + L NNI++R +G+ L + L+ +T
Sbjct: 67 ENWKRPDAEIKGLFGLINDVMSSYIPELAGNNIRLRHLGHLDKLPAMLKHKLESLLSETS 126
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
NTGL L +AF+Y RDEI +A+K + +D + + L A YL T+ +P+ LI
Sbjct: 127 QNTGLTLSLAFDYGGRDEIIQAVKKLVKD----GIEPDKISEELFAGYLFTTGIPEAGLI 182
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRTGGE RLS+FLLWQ AYSE F WPDF + A++ +N R RRFGGL
Sbjct: 183 IRTGGEIRLSNFLLWQSAYSELYFSEVMWPDFGEKEIDRAISAFNQRQRRFGGL 236
>gi|148261538|ref|YP_001235665.1| undecaprenyl diphosphate synthase [Acidiphilium cryptum JF-5]
gi|326405027|ref|YP_004285109.1| undecaprenyl pyrophosphate synthetase [Acidiphilium multivorum
AIU301]
gi|146403219|gb|ABQ31746.1| Undecaprenyl pyrophosphate synthetase [Acidiphilium cryptum JF-5]
gi|325051889|dbj|BAJ82227.1| undecaprenyl pyrophosphate synthetase [Acidiphilium multivorum
AIU301]
Length = 254
Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats.
Identities = 101/227 (44%), Positives = 143/227 (62%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
HI IIMDGNGRWAA GLPR AGHR+G++ + AA G++ LT+FAFS NWRRP
Sbjct: 14 RHIAIIMDGNGRWAARHGLPRAAGHREGVQAVRRTIEAAIGHGVEWLTLFAFSSENWRRP 73
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
V E+++L L++ +L+ L + +++ +IG R + L +AE +T N LN
Sbjct: 74 VEEVTDLTFLLRHYLRSELRELAEAGVRLHIIGERDRFGSSLKAELADAEARTAANRKLN 133
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L IA +Y +R EI+ A + I + +G++ VD ++ A +L T+ +PDPDL+IRT GE
Sbjct: 134 LVIALSYGARAEIATAARRIAEAAMAGTLDPTTVDETIFAAHLSTAGMPDPDLVIRTSGE 193
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+RLS+FLLWQ AY+E VF WPDF A+ +Y R+RRFG
Sbjct: 194 QRLSNFLLWQAAYAELVFDDALWPDFGAANLGRAIAEYARRERRFGA 240
>gi|315186477|gb|EFU20237.1| Undecaprenyl pyrophosphate synthetase [Spirochaeta thermophila DSM
6578]
Length = 232
Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats.
Identities = 105/235 (44%), Positives = 142/235 (60%), Gaps = 5/235 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ +S P HIGIIMDGNGRWA RGLPR GH +G++ +V AAAE GI L+++ FS
Sbjct: 3 IGTSLPRHIGIIMDGNGRWATRRGLPRYKGHEEGLKATKRVVKAAAERGIPYLSLYTFST 62
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+R E+S L+ L++ +LKK F ++ I++ GN L +I L + T
Sbjct: 63 ENWKRAQEEVSFLMGLVRRYLKKEFDFYREYGIRIVHSGNLEGLPREIRRDLLDVIRDTA 122
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
TGL L IA NY RDEI RA+K ++ ++ +YLD ++PDPDL+
Sbjct: 123 SFTGLTLNIALNYGGRDEILRAMKRWLEEGGG-----QELTEESFRRYLDVPELPDPDLV 177
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IRT GE+RLS+FL+WQ AY+E+ F P WPDFS F AL Y R R+FGG +
Sbjct: 178 IRTAGEQRLSNFLIWQAAYAEYYFTPVLWPDFSERDFDEALRDYASRTRKFGGTA 232
>gi|239908425|ref|YP_002955167.1| undecaprenyl pyrophosphate synthetase [Desulfovibrio magneticus
RS-1]
gi|239798292|dbj|BAH77281.1| undecaprenyl pyrophosphate synthetase [Desulfovibrio magneticus
RS-1]
Length = 232
Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats.
Identities = 99/233 (42%), Positives = 126/233 (54%), Gaps = 4/233 (1%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ +IMDGNGRWA RGLPR GHR G+E IV E+GI++LT++ FS NW
Sbjct: 1 MPRHVAVIMDGNGRWATMRGLPRSEGHRAGVESARGIVTRCRELGIEHLTLYTFSKENWG 60
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP EI L L+ FL K +L +I+ +V+G L VL +T
Sbjct: 61 RPADEIKFLFDLLVRFLTKELDTLLAQSIRFKVLGELDELPLAARTVLSRVIAKTAHCEA 120
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ L +A NYS R+EI RA + + + S V +A L T+ PDPDLIIRT
Sbjct: 121 MTLNLALNYSGREEILRACRRLAAK----GLASEAVTEEALAAELYTAGQPDPDLIIRTS 176
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE RLS +LLWQ AYSEF F WPDF+ L Y R RRFG ++
Sbjct: 177 GEMRLSGYLLWQSAYSEFAFPETLWPDFTPACLDAILADYCNRTRRFGLTGEQ 229
>gi|83858384|ref|ZP_00951906.1| undecaprenyl pyrophosphate synthetase [Oceanicaulis alexandrii
HTCC2633]
gi|83853207|gb|EAP91059.1| undecaprenyl pyrophosphate synthetase [Oceanicaulis alexandrii
HTCC2633]
Length = 239
Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats.
Identities = 102/239 (42%), Positives = 149/239 (62%), Gaps = 3/239 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + S P H+ IIMDGNGRWAA+R PR GHRKG+E E V AA E+G+++LT+
Sbjct: 1 MSETDPSGPTPQHVAIIMDGNGRWAASRDRPRAFGHRKGVEAVREAVRAAGELGVRHLTL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
F+FS NW RP +E+ L +L++ F+ L ++VR++G R L +++L +++
Sbjct: 61 FSFSTENWSRPAAEVEALFELLRRFVAADLDRLHAEGVRVRILGRREGLSEELLKLIETV 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E +T N +L IAFNY RDEI + + + + + +YLDT+ +P
Sbjct: 121 ETRTEANDAFSLNIAFNYGGRDEIV---RAARRAAVALDGDLSALTEADFGQYLDTAALP 177
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRT GE R+S+FLLWQ AY+EFVF+ WPDF + F A+ ++ RDRR+GG+
Sbjct: 178 DPDLVIRTSGEYRISNFLLWQAAYAEFVFMDILWPDFDKAAFQRAIAEFASRDRRYGGV 236
>gi|296120537|ref|YP_003628315.1| undecaprenyl diphosphate synthase [Planctomyces limnophilus DSM
3776]
gi|296012877|gb|ADG66116.1| undecaprenyl diphosphate synthase [Planctomyces limnophilus DSM
3776]
Length = 312
Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats.
Identities = 95/231 (41%), Positives = 139/231 (60%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +IMDGNGRWA +GL R GHR+G++ +V +GI+ LT++ S NW+R
Sbjct: 77 PRHIAVIMDGNGRWAQRQGLERLEGHRRGVQSVRCVVEECVRLGIEQLTLYCLSSENWKR 136
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P SE+ L+ L+K FL + + N++ VIG R L +D+L + +TG+
Sbjct: 137 PKSELDFLMALLKEFLIAERPEIIRQNLQFSVIGRRTELPEDVLIEIDTTARIAESHTGM 196
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY SR EI A++ I D+ SG + +D LI+ L+T ++P+PDL+IRT G
Sbjct: 197 RLCLAINYGSRAEIVDAVRWIAHDVASGRLSPEAIDEDLISARLNTREMPEPDLVIRTAG 256
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E RLS+FLLWQ++Y+E WP+F AL ++ R RRFGGL++
Sbjct: 257 EMRLSNFLLWQISYAELFVTTTLWPEFREPELQAALEAFSRRQRRFGGLNQ 307
>gi|88812381|ref|ZP_01127631.1| undecaprenyl diphosphate synthase [Nitrococcus mobilis Nb-231]
gi|88790388|gb|EAR21505.1| undecaprenyl diphosphate synthase [Nitrococcus mobilis Nb-231]
Length = 256
Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats.
Identities = 96/237 (40%), Positives = 139/237 (58%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ + P H+ I+MDGNGRWA AR R GHR G ++V ++A GIK LT+F FS
Sbjct: 13 LEGAVPRHVAIVMDGNGRWAQARSQSRHLGHRAGARAVRQVVESSARAGIKALTLFVFSS 72
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NWRRP E+ L++L+ L+K L KN +++R+IG R + + AE+ T
Sbjct: 73 ENWRRPAGEVGMLMELLIRTLEKETPQLHKNRVRLRLIGERDQFSPRLQANIMAAENLTA 132
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
NTGL L +A +Y R +I+RA + + +++ +G +D + Y+ + +P PDL
Sbjct: 133 ANTGLQLNLAASYGGRWDIARAARRLAEEVANGERDPASIDEWVFGTYVCLAGLPAPDLF 192
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTGGE R+S+FLLWQ+AY+E F WPDF F AL + R RRFG S++
Sbjct: 193 IRTGGEHRISNFLLWQLAYTELYFTEVLWPDFDVSEFEAALRWFAQRQRRFGMTSEQ 249
>gi|84496822|ref|ZP_00995676.1| di-trans-poly-cis-decaprenylcistransferase [Janibacter sp.
HTCC2649]
gi|84383590|gb|EAP99471.1| di-trans-poly-cis-decaprenylcistransferase [Janibacter sp.
HTCC2649]
Length = 271
Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats.
Identities = 91/234 (38%), Positives = 139/234 (59%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P H+ I+MDGNGRWA RGLPR GH G ++VA A E G+ +L+ +AFS
Sbjct: 17 LAQAQVPGHVAIVMDGNGRWANQRGLPRTKGHEAGEGALLDVVAGAIEAGVTHLSTYAFS 76
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+R E+ L+ + +++ L + +++ +G R L ++ L+ A++ T
Sbjct: 77 TENWKRSPDEVRFLMGFNRDVIRRRRDQLHEWGVRMVWVGRRPRLWSSVIKELEIAQELT 136
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
R NTGL L+ NY R E+ A + + +D+ G + + +VD +A+YL D+PD DL
Sbjct: 137 RHNTGLTLYFCVNYGGRAELGDAARALAEDVARGRIKARNVDERTLARYLPEPDMPDVDL 196
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+R+ GE+R S+FLLWQ AY+E VF+ WPDF R + A+ Y RDRR+GG
Sbjct: 197 FVRSSGEQRTSNFLLWQSAYAEMVFLDTLWPDFDRRDLWRAIEIYADRDRRYGG 250
>gi|114704872|ref|ZP_01437780.1| undecaprenyl pyrophosphate synthase [Fulvimarina pelagi HTCC2506]
gi|114539657|gb|EAU42777.1| undecaprenyl pyrophosphate synthase [Fulvimarina pelagi HTCC2506]
Length = 228
Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats.
Identities = 116/225 (51%), Positives = 157/225 (69%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA ARGLPR GHR+G+E V AA E+GI+ LT+FAFS NW RP EI E
Sbjct: 1 MDGNGRWARARGLPRSVGHRRGVEAVRATVRAAGELGIEYLTLFAFSSENWSRPSEEIDE 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ L+K F+++ L K ++VR++G R +L DIL +L+EAE+ TR N L +AFN
Sbjct: 61 LLGLLKMFIRRDLADLHKEGVRVRIVGARDNLQPDILSLLEEAENLTRHNERQTLVVAFN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y +RDEI+RA++ I + + +G + +D + +LDT+ +PDPDLIIRT GE RLS+F
Sbjct: 121 YGARDEIARAVRAIARKVAAGEIDVATLDDEAVTAHLDTAGIPDPDLIIRTSGEIRLSNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
LLWQ AYSEFVF+P WP+F + A+ +Y RDRR+GGLS++
Sbjct: 181 LLWQAAYSEFVFMPMNWPEFDKGALQEAIGEYASRDRRYGGLSRE 225
>gi|308177456|ref|YP_003916862.1| di-trans,poly-cis-decaprenylcistransferase [Arthrobacter
arilaitensis Re117]
gi|307744919|emb|CBT75891.1| di-trans,poly-cis-decaprenylcistransferase [Arthrobacter
arilaitensis Re117]
Length = 268
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 93/238 (39%), Positives = 139/238 (58%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P+H+ I+MDGNGRWA RGLPR GHR G +++A A E+G+K ++++AFS
Sbjct: 28 IPRELVPEHVAIVMDGNGRWANQRGLPRTEGHRAGEAALLDVMAGAVELGVKYVSVYAFS 87
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+R E+ L+ + L++ +L +++R G L ++ L+ AE+ T
Sbjct: 88 TENWKRSPEEVRFLMGFSRDVLRRQRDTLNSWGVRIRWSGREPKLWKSVINELRAAEELT 147
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ N G L + NY R E+ A+ I +D+ +G + + V I KYL ++PD DL
Sbjct: 148 QDNQGCQLTMCVNYGGRAELGDAVSAIAKDVAAGKLRASSVGEKTIGKYLHAPELPDVDL 207
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+RT GE+R S+FLLWQ AY+E VF+ E WPD R F A+ +Y RDRR+GG K
Sbjct: 208 FLRTSGEQRTSNFLLWQSAYAEMVFLDELWPDVDRRTLFRAVEEYARRDRRYGGAVDK 265
>gi|262279361|ref|ZP_06057146.1| undecaprenyl pyrophosphate synthetase [Acinetobacter calcoaceticus
RUH2202]
gi|262259712|gb|EEY78445.1| undecaprenyl pyrophosphate synthetase [Acinetobacter calcoaceticus
RUH2202]
Length = 250
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 91/233 (39%), Positives = 142/233 (60%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IIMDGN R+A + + GHR+G V + IV + GI+ LT+FAFS NW
Sbjct: 9 LPKHVAIIMDGNNRFAKKNQMQKGDGHREGKNVLDPIVEHCKKTGIRALTVFAFSSENWN 68
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ L+KL++ + + +K+ NI +R IG+R L ++ ++++AE QT +
Sbjct: 69 RPQYEVDLLMKLLEESIHEQIPRMKEFNIALRFIGDRSRLSSHLVALMEDAEQQTAHHDT 128
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ L IA +Y +I+ A K + Q + G + ++ L KY+ +D+P DL+IRTG
Sbjct: 129 MTLTIAISYGGMWDIANAAKQVAQAVSRGEFGADQINVDLFEKYVSLNDLPAVDLLIRTG 188
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
G+ R+S+FLLWQ AY+E F WP+F+ + F HALN ++ R+RRFG S++
Sbjct: 189 GDYRISNFLLWQAAYAELYFTDTLWPEFTVKEFDHALNVFSGRERRFGKTSEQ 241
>gi|294787448|ref|ZP_06752701.1| di-trans,poly-cis-decaprenylcistransferase [Parascardovia
denticolens F0305]
gi|315226982|ref|ZP_07868769.1| di-trans,poly-cis-decaprenylcistransferase [Parascardovia
denticolens DSM 10105]
gi|294484804|gb|EFG32439.1| di-trans,poly-cis-decaprenylcistransferase [Parascardovia
denticolens F0305]
gi|315119432|gb|EFT82565.1| di-trans,poly-cis-decaprenylcistransferase [Parascardovia
denticolens DSM 10105]
Length = 267
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 88/235 (37%), Positives = 139/235 (59%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S P H+G+IMDGNGRWA RGL R GH+ V + +A A E G++ L+++ FS
Sbjct: 29 SGKVPKHVGVIMDGNGRWAQQRGLVRTEGHKAAEPVVFDTIAGAIEAGVRYLSLYTFSTE 88
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW+R SE+ L+ + + + + ++VR G R L ++ L+ A ++TR
Sbjct: 89 NWKRSPSEVRFLMGFSRDIIHRRVDQMNDWGVRVRWSGRRPRLWKSVIEELETAMEKTRK 148
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N +++ NY R EI+ A I +++ +G + V +I+++L D+PD DL+I
Sbjct: 149 NKTIDVVFCINYGGRAEIADAAAQIAREVAAGKIKGDRVTEKMISEHLYNPDIPDCDLVI 208
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
RT GE+R S+FL W+ AY+E F+PE WPD R++ + +++ Y RDRRFGG+ K
Sbjct: 209 RTSGEQRTSNFLPWEAAYAELDFVPELWPDCGRQVLWRSIDHYTNRDRRFGGVKK 263
>gi|291278554|ref|YP_003495389.1| undecaprenyl pyrophosphate synthetase [Deferribacter desulfuricans
SSM1]
gi|290753256|dbj|BAI79633.1| undecaprenyl pyrophosphate synthetase [Deferribacter desulfuricans
SSM1]
Length = 239
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 94/238 (39%), Positives = 138/238 (57%), Gaps = 5/238 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M + P H+ IIMDGNGRWA R LPR GHR G+E N+IV+ A+++GIK L++FAFS
Sbjct: 1 MTNDKNPLHVAIIMDGNGRWAKQRNLPRIFGHRAGMESVNKIVSYASKLGIKYLSLFAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP E++ L++++ F+ K F + NIK+ V G + ++ L++ D +
Sbjct: 61 TENWLRPKDEVNGLMEILNEFIDKKFNEIIDKNIKLVVSGRLEQIPEEPRSKLEKLIDAS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N+G+ L +A NY R EI A+ I S + +L ++PD DL
Sbjct: 121 SNNSGMVLNLALNYGGRSEIVDAVNKIL-----KSGLKEIKEEEDFKDFLYNPEIPDVDL 175
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IRT GE R+S+F+LW++AY+E F WPDF + F AL+ Y R RRFG ++
Sbjct: 176 LIRTSGEMRISNFMLWRLAYAELYFTEVLWPDFDEKEFDKALDNYKSRVRRFGMTDEQ 233
>gi|117928004|ref|YP_872555.1| undecaprenyl pyrophosphate synthetase [Acidothermus cellulolyticus
11B]
gi|117648467|gb|ABK52569.1| Undecaprenyl pyrophosphate synthetase [Acidothermus cellulolyticus
11B]
Length = 269
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 92/235 (39%), Positives = 138/235 (58%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S+ P H+ I+MDGNGRWA ARGLPR AGH +G ++V A E+G+K L+ +AF
Sbjct: 19 SLPPERIPRHVAIVMDGNGRWARARGLPRTAGHERGEAALLDVVEGAIEIGVKWLSAYAF 78
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + +++ + + ++VR G R L ++ L+ AE+
Sbjct: 79 STENWKRSPEEVRFLMGFNRDVIRRRRDYMNELGVRVRWAGRRPRLWRSVIRELERAEEM 138
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N L L + NY R EI+ A + + D+ +G + V + A+YLD D+PD D
Sbjct: 139 TKHNDVLTLTMCVNYGGRAEIADAARALAADVAAGRLSPASVTERVFARYLDEPDMPDVD 198
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L IR+ GE+R S+FL+WQ AY+E VF+ WPDF R + A+ Y R+RR+G
Sbjct: 199 LFIRSSGEQRTSNFLIWQSAYAELVFVDTLWPDFDRRDLWRAIEIYAQRERRYGA 253
>gi|238897806|ref|YP_002923485.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
gi|229465563|gb|ACQ67337.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
Length = 252
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 90/229 (39%), Positives = 134/229 (58%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R GH++G +V A + +LT++AFS NW R
Sbjct: 16 PRHVAIIMDGNGRWAEKKGKLRILGHKEGARSVRNVVNFAVNHRLPSLTLYAFSSENWHR 75
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ L++L L +L KNN+ ++IG+ + ++ AE+ T N GL
Sbjct: 76 PEKEVTALMRLFMQTLGNEVKNLHKNNVCFQIIGDISRFTPRLQNRIRSAEELTENNNGL 135
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I ++++++ ++ G + ++ L+ YL + PD DL+IRTGG
Sbjct: 136 KLNIAANYGGRWDIIKSVQSLAALVKIGQLEPSQINEELMNSYLSLKEQPDVDLMIRTGG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E R+S+FLLWQ+AY+EF F WPDF +F ALN + R+RRFG
Sbjct: 196 EYRVSNFLLWQIAYTEFYFTDVLWPDFDEFIFESALNAFAKRERRFGRT 244
>gi|302551285|ref|ZP_07303627.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces
viridochromogenes DSM 40736]
gi|302468903|gb|EFL31996.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces
viridochromogenes DSM 40736]
Length = 277
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 91/229 (39%), Positives = 135/229 (58%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ I+MDGNGRWA RGLPR GH+ G E +++ A E+G+ ++++AFS NW+
Sbjct: 33 VPKHVAIVMDGNGRWAKDRGLPRTEGHKVGAERVLDVLQGAIEMGVGAISLYAFSTENWK 92
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ L+ + F++K L + I+VR +G L + L+ A++QT+ N
Sbjct: 93 RSPDEVRFLMNFNRDFIRKTRDQLDELGIRVRWVGRMPKLWRSVAKELQIAQEQTKGNDR 152
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L+ NY R EI+ A + + QD+ SG + V+ AKY+ D+PD DL +R
Sbjct: 153 LTLYFCMNYGGRAEIADAAQALAQDVRSGKLDPSKVNEKTFAKYMYYPDMPDVDLFLRPS 212
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GE+R S++L+WQ AY+E VF WPDF R + A ++ RDRRFGG
Sbjct: 213 GEQRTSNYLIWQSAYAEMVFQDVLWPDFDRRDLWRACLEFASRDRRFGG 261
>gi|147669000|ref|YP_001213818.1| undecaprenyl diphosphate synthase [Dehalococcoides sp. BAV1]
gi|146269948|gb|ABQ16940.1| undecaprenyl diphosphate synthase [Dehalococcoides sp. BAV1]
Length = 236
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 100/234 (42%), Positives = 142/234 (60%), Gaps = 4/234 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
++++PPDHI IIMDGNGRWA RGL R GH+ G+E ++ + +G+K +T+++FS
Sbjct: 7 INNTPPDHIAIIMDGNGRWAERRGLSRLEGHKAGLENARRVIRHLSSLGVKYVTLYSFST 66
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP +EI L LI + L NNI++R +G+ L + L+ +T
Sbjct: 67 ENWKRPDAEIKGLFGLINDVISSYIPELAGNNIRLRHLGHLDKLPAMLKHKLESLLSETS 126
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N+GL L +AF+Y RDEI +A+K + +D + + L A YL T+ +P+ LI
Sbjct: 127 QNSGLTLSLAFDYGGRDEIIQAVKKLVKD----GIEPDKISEELFAGYLFTTGIPEAGLI 182
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRTGGE RLS+FLLWQ AYSE F WPDF + A++ +N R RRFGGL
Sbjct: 183 IRTGGEIRLSNFLLWQSAYSELYFSEVMWPDFGEKEIDRAISAFNQRQRRFGGL 236
>gi|238026906|ref|YP_002911137.1| Di-trans-poly-cis-decaprenylcistransferase [Burkholderia glumae
BGR1]
gi|237876100|gb|ACR28433.1| Di-trans-poly-cis-decaprenylcistransferase [Burkholderia glumae
BGR1]
Length = 260
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 98/235 (41%), Positives = 141/235 (60%), Gaps = 1/235 (0%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
++ P HI IIMDGNGRWA R LPR AGH +G++ +V A G++ LT+FAFS N
Sbjct: 14 AAVPRHIAIIMDGNGRWATERRLPRVAGHTRGVDAVRSVVEGCARAGVEYLTLFAFSSEN 73
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+S L++L + L++ L N I++RV+G+ + I +++ AE +T N
Sbjct: 74 WRRPTDEVSFLMRLFITALEREVGKLHANGIRLRVVGDLDRFEPRIRELIRRAETKTARN 133
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T L L IA NY R +I +A + + + VD + +L + P+PDL IR
Sbjct: 134 TRLTLTIAANYGGRWDILQATRKLIAE-AVREGREIPVDEAAFEPHLAMAYAPEPDLFIR 192
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE+R+S+FLLWQ+AY+EF F ++WPDF A+ Y R+RRFG S +
Sbjct: 193 TGGEQRVSNFLLWQLAYTEFYFTGKFWPDFDATALADAMASYTDRERRFGRTSAQ 247
>gi|256375394|ref|YP_003099054.1| undecaprenyl diphosphate synthase [Actinosynnema mirum DSM 43827]
gi|255919697|gb|ACU35208.1| undecaprenyl diphosphate synthase [Actinosynnema mirum DSM 43827]
Length = 288
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 96/235 (40%), Positives = 137/235 (58%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ + P HI I+MDGNGRWA RGL R GH++G E A E+G+K L+++AF
Sbjct: 28 AIPAEFVPKHIAIVMDGNGRWANQRGLSRVEGHKRGEANVVEAAKGAIEMGVKWLSLYAF 87
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRR E+ L+ + + + L + ++VR G R L ++ L+ A+++
Sbjct: 88 STENWRRSPEEVRFLMGFSRDVIHRRTDELDELGVRVRWAGRRPRLWRSVVTELESAQER 147
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NT LNL + NY R E+ A + I + +G + VD IA+YL ++PD D
Sbjct: 148 TKHNTTLNLAMCINYGGRAEVGDAAREIARLAAAGKINPDKVDERTIARYLYQPEMPDVD 207
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L IR GE+R S+F+LWQ AY+E VF WPDF RE + A QY +RDRRFGG
Sbjct: 208 LFIRPSGEQRTSNFMLWQSAYAELVFQDILWPDFGREDLWRACEQYAMRDRRFGG 262
>gi|17546127|ref|NP_519529.1| undecaprenyl pyrophosphate synthetase [Ralstonia solanacearum
GMI1000]
gi|42559849|sp|Q8XZI7|UPPS_RALSO RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|17428423|emb|CAD15110.1| probable undecaprenyl pyrophosphate synthetase (upp
synthetase)(di-trans,poly-cis-decaprenylcistransferase)
(undecaprenyl diphosphate synthase) (uds) protein
[Ralstonia solanacearum GMI1000]
Length = 258
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 98/241 (40%), Positives = 142/241 (58%), Gaps = 2/241 (0%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+A ++ P H+ IIMDGNGRWA R LPR AGH +G++ V AA G++ LT+F
Sbjct: 7 LAVPDTADTPHHVAIIMDGNGRWATERHLPRMAGHSRGLDAVRAAVQAADHRGVRYLTLF 66
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP EIS L+KL + L++ L + I++RV+G+ + I +++EAE
Sbjct: 67 AFSSENWRRPAEEISFLMKLFMTALRREVSKLNDSGIRLRVVGDLSAFSPRIQLMIREAE 126
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T N GL + IA NY R +I +A++ + D + + ++ Y+ + +
Sbjct: 127 AKTATNPGLTVTIAANYGGRWDILQAMRALVAD--QPDIAPEAITEEALSPYMALAYASE 184
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL IRTGGE+R+S+F+LWQ+AYSE F YWPDF A Y R+RRFG S
Sbjct: 185 PDLFIRTGGEQRISNFMLWQLAYSELYFTERYWPDFDAAEMDRAFAWYRNRERRFGRTSA 244
Query: 242 K 242
+
Sbjct: 245 Q 245
>gi|297625078|ref|YP_003706512.1| undecaprenyl diphosphate synthase [Truepera radiovictrix DSM 17093]
gi|297166258|gb|ADI15969.1| undecaprenyl diphosphate synthase [Truepera radiovictrix DSM 17093]
Length = 310
Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats.
Identities = 94/244 (38%), Positives = 133/244 (54%), Gaps = 6/244 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ S+ S S P HIG+IMDGN R+A + GL AGH G E++ E+GI ++T+
Sbjct: 67 LERSVRSGSLPRHIGLIMDGNRRFARSVGLDVTAGHDYGAGKAREVLEWCFELGIPHVTL 126
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+ FS +N R SE+S L L K+ + +N ++VRVIG+ ++ L+
Sbjct: 127 WGFSTDNRGRAQSEVSHLHSLFARQAKEMVQDPKIHRNRVRVRVIGDIGDFPPEVQAALR 186
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCS----HDVDSSLIAKYL 174
E E T + L +A Y R+EI A++N+ +D + V + I ++L
Sbjct: 187 EVERATEHYDKMQLNVAVGYGGREEIVAAVRNLLRDEAHAHLRPAELAERVSADTIGQHL 246
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
T+ VPDPD IIRT GE RLS FLLWQ AYSE+ F +WP F + F AL Y R+R
Sbjct: 247 YTAGVPDPDFIIRTSGEVRLSGFLLWQAAYSEYYFCDAFWPSFRKVDFLRALRSYQARER 306
Query: 235 RFGG 238
RFG
Sbjct: 307 RFGK 310
>gi|225434602|ref|XP_002279235.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 317
Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats.
Identities = 91/236 (38%), Positives = 143/236 (60%), Gaps = 2/236 (0%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P+H+ +IMDGN RWA RGLP +GH+ G+ E+V + GIK L++FAFS
Sbjct: 80 LRRELMPEHVAVIMDGNVRWAQKRGLPAASGHQAGVRSLRELVGLCCKWGIKVLSVFAFS 139
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
+NW R E+ L+ LI+ +K + + I+V VIG+ L + + ++ + E+ T
Sbjct: 140 YDNWSRSEGEVGFLMSLIERVVKAELPNFGREGIRVSVIGDLSKLPEQLQKLIIDVEETT 199
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS--DVPDP 182
+ N+ L +A +YS + +I +A KNI ++ G + D++ SLI + L T+ + P P
Sbjct: 200 KENSRLQFIVALSYSGQCDILQACKNIGYKVKDGLIEPEDINKSLIEQELQTNCTEFPFP 259
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DL+IRT GE R+S+F+LWQ+AY+E F WPDF ++ F AL+ + R RR+GG
Sbjct: 260 DLLIRTSGELRVSNFMLWQIAYTELCFFSTLWPDFGKDEFVEALSSFQKRQRRYGG 315
>gi|262166333|ref|ZP_06034070.1| undecaprenyl pyrophosphate synthetase [Vibrio mimicus VM223]
gi|262026049|gb|EEY44717.1| undecaprenyl pyrophosphate synthetase [Vibrio mimicus VM223]
Length = 232
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 86/225 (38%), Positives = 141/225 (62%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA A+G PR GH+ G+ + ++ +A +GIK +T+FAFS NWRRP E+
Sbjct: 1 MDGNGRWAKAQGKPRVFGHKNGVAAVRKTISTSARLGIKAVTLFAFSSENWRRPEEEVGV 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L + L L KNN+++RVIG++ + + + +AE T NTG+ + IA N
Sbjct: 61 LMELFITVLSTEIKKLHKNNLRLRVIGDKSRFSERLQSKIAQAEALTASNTGMVVNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y + +I +A + + + + G + ++D ++I ++L +D+P+ DL+IRT GE R+S+F
Sbjct: 121 YGGKWDILQATQALAEKVAQGDLLPAEIDEAMIKQHLTMADLPEVDLLIRTSGECRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+LWQ+AY+E F P +WP+F A+ + R+RRFG ++
Sbjct: 181 MLWQLAYAEMYFTPVFWPEFDENCLIEAVTWFVNRERRFGCTGEQ 225
>gi|220903795|ref|YP_002479107.1| undecaprenyl diphosphate synthase [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219868094|gb|ACL48429.1| undecaprenyl diphosphate synthase [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 280
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 96/241 (39%), Positives = 134/241 (55%), Gaps = 4/241 (1%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + P H+ IIMDGNGRWA AR LPR AGH+ G E +V +GI++LT++
Sbjct: 40 AGDLPVTQLPVHLAIIMDGNGRWAQARNLPREAGHKAGAEAVRAVVTECRRLGIRHLTLY 99
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
FS NW RP +EIS L L+ FL++ L++ I +RV+G+ L L+ A
Sbjct: 100 TFSSENWNRPKAEISALFSLLLEFLRRELPRLEEQGIALRVLGDLDGLPLAQRTALRHAI 159
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T + L +A NY SR E+ RA+++ D D+ +A+ L T+ PD
Sbjct: 160 KRTADGPHMVLNLALNYGSRAELVRAMRSFLHD----GARPEDITEESLAQRLYTAGQPD 215
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL+IRT GE+RLS++LL+Q AYSE F WPDF AL Y R RRFG +
Sbjct: 216 PDLLIRTSGEQRLSNYLLYQCAYSELYFTQVAWPDFDAAQLRLALEAYAARSRRFGKTQE 275
Query: 242 K 242
+
Sbjct: 276 Q 276
>gi|148642156|ref|YP_001272669.1| undecaprenyl pyrophosphate synthase, UppS [Methanobrevibacter
smithii ATCC 35061]
gi|222444664|ref|ZP_03607179.1| hypothetical protein METSMIALI_00277 [Methanobrevibacter smithii
DSM 2375]
gi|261350796|ref|ZP_05976213.1| di-trans,poly-cis-decaprenylcistransferase [Methanobrevibacter
smithii DSM 2374]
gi|148551173|gb|ABQ86301.1| undecaprenyl pyrophosphate synthase, UppS [Methanobrevibacter
smithii ATCC 35061]
gi|222434229|gb|EEE41394.1| hypothetical protein METSMIALI_00277 [Methanobrevibacter smithii
DSM 2375]
gi|288860414|gb|EFC92712.1| di-trans,poly-cis-decaprenylcistransferase [Methanobrevibacter
smithii DSM 2374]
Length = 254
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 90/238 (37%), Positives = 136/238 (57%), Gaps = 3/238 (1%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARG-LPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
++ +S P H+ IIMDGN R++ +G + GH G++ +++ E+GI+ +T +
Sbjct: 16 RNLETSKMPKHVAIIMDGNRRYSKIQGNMDVVKGHEIGVDTLEKVLDWTIELGIEIVTAY 75
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVLKE 119
AFS N+ RP E+ L+ L K+ + KN +KV+V+G L D++ + +
Sbjct: 76 AFSTENFNRPEHEVEGLMNLFFKNFKRLVDHEKIHKNEVKVKVVGRIDLLPDNVKEAIND 135
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV 179
AE+ T+ L +A Y R EI ++K I +DIE G + DVD LI+K L T+ +
Sbjct: 136 AEEATKNYNKRQLNLAIGYDGRLEIVDSVKKIIRDIEKGLITVDDVDEDLISKNLYTAGL 195
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DP+LIIRT GE+RLS FLLWQ +YSE F WP+ + F A+ Y R+RRFG
Sbjct: 196 DDPNLIIRTSGEERLSGFLLWQSSYSELYFCESLWPELRKVDFLRAIRSYQERERRFG 253
>gi|303244703|ref|ZP_07331034.1| undecaprenyl diphosphate synthase [Methanothermococcus okinawensis
IH1]
gi|302484917|gb|EFL47850.1| undecaprenyl diphosphate synthase [Methanothermococcus okinawensis
IH1]
Length = 263
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 82/242 (33%), Positives = 132/242 (54%), Gaps = 4/242 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P HIG+IMDGN R A G GH G + E + ++ IK +T+
Sbjct: 22 LEGEINKKKVPKHIGVIMDGNRRMARIMGEKSTKGHYIGAKKVREFIGWCVDLNIKIITL 81
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLK--KGFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
++FS+ N+ RP E+ L+KL + + ++ K I ++ IG L +++ +
Sbjct: 82 YSFSLENFNRPKEEVDALMKLFEREFRAVAEDRNVHKYKIHIKAIGRIELLPENVREAIA 141
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
AE++T+ + +A Y + E+ AIK I Q I++ + +D+ I+K+L T+
Sbjct: 142 YAENKTKDYDNYYVNVAIAYGGQQELVDAIKRIGQKIKNNEMDVNDISVETISKHLYTAH 201
Query: 179 VP--DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
+P +PDLIIRT GE+R+S+FL+WQ +YSE F YWP+F + F A+ Y R RRF
Sbjct: 202 LPYQNPDLIIRTSGEERISNFLIWQSSYSELYFCETYWPNFRKIDFLRAIRDYQRRKRRF 261
Query: 237 GG 238
G
Sbjct: 262 GK 263
>gi|148272760|ref|YP_001222321.1| putative undecaprenyl pyrophosphate synthetase [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
gi|147830690|emb|CAN01630.1| putative undecaprenyl pyrophosphate synthetase [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
Length = 288
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 98/235 (41%), Positives = 145/235 (61%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ + P HI ++MDGNGRWA RGLPR AGH+ G E + + VA A ++G +L+++AF
Sbjct: 24 AIPADLVPKHIAVVMDGNGRWANQRGLPRTAGHQAGEEAWFDTVAGAVQLGATHLSVYAF 83
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R +E+ L+ + + + L N+++R G R L ++ L+ AE+
Sbjct: 84 STENWKRSPAEVRFLMGFNRDVIHRRRDQLNAWNVRIRWAGRRPRLWRSVIDDLQVAEEM 143
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NTG+ L + NY R EI A++ I +D+++G + + VD I +YL DVPD D
Sbjct: 144 TKDNTGMTLTMCINYGGRTEIGDAVRRIAEDVDAGRLKASRVDERTIQRYLYLPDVPDVD 203
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L IR+ GE+R S+FLLWQ AY+E VF+ WPDF R + A+ Y RDRRFGG
Sbjct: 204 LFIRSSGEQRTSNFLLWQSAYAEMVFLDRLWPDFRRTDLWDAVESYVHRDRRFGG 258
>gi|187735687|ref|YP_001877799.1| undecaprenyl diphosphate synthase [Akkermansia muciniphila ATCC
BAA-835]
gi|187425739|gb|ACD05018.1| undecaprenyl diphosphate synthase [Akkermansia muciniphila ATCC
BAA-835]
Length = 238
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 93/236 (39%), Positives = 132/236 (55%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ P HI IMDGNGRWA +R LPR AGHR G + I LT++AF
Sbjct: 3 TIPKEKLPTHIACIMDGNGRWANSRHLPRQAGHRAGADTVERCADFCMAHDIPWLTLYAF 62
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP +E+ L+ L+ FLKK + + +++ IG+ + +L+ + +
Sbjct: 63 SSENWNRPKTEVRALMLLLHEFLKKRLNQMMEKGVRLHAIGDLSRIPARTRKLLQNSLEA 122
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NT LNL +A +Y SR EI+ A + I + + G + V L +YLDT+ +P+PD
Sbjct: 123 TSGNTRLNLVLAISYGSRGEIAAAARKIAEKVSRGELPPDAVTEDLFGEYLDTAGMPEPD 182
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
L+IRT GE R+S+FLLWQ++Y+E WPDF AL Y+ R RRFG L
Sbjct: 183 LLIRTSGEMRVSNFLLWQISYAEIHVTDTLWPDFCDRDMEAALLDYSRRKRRFGAL 238
>gi|169628766|ref|YP_001702415.1| undecaprenyl pyrophosphate synthetase [Mycobacterium abscessus ATCC
19977]
gi|169240733|emb|CAM61761.1| Probable undecaprenyl pyrophosphate synthetase [Mycobacterium
abscessus]
Length = 302
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 94/234 (40%), Positives = 134/234 (57%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ P H+ ++MDGNGRWA ARGLPR GH+ G ++V A E+GI LT +AF
Sbjct: 67 AIPKELIPRHVAVVMDGNGRWARARGLPRTEGHKMGEATMMDMVCGAIEMGIPWLTTYAF 126
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRRP E+ L+ + +K+ + L ++ R G + L + L+ E+
Sbjct: 127 STENWRRPADEVRFLMGFNRDVVKRRRHDLNNMGVRFRWAGQKTRLWSSVYKELEITEEL 186
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N+ L L NY R EI+ A + I + +ESG + + IAKYLD D+PD D
Sbjct: 187 TKNNSTLTLTTCINYGGRAEIAEATRRIARLVESGQLKPDRITEETIAKYLDEPDMPDVD 246
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
L +R GE R S+F++WQ AY+EFVF + +PDF R + A +Y RDRRFG
Sbjct: 247 LFLRPSGEFRSSNFMMWQSAYAEFVFQEKMYPDFDRRDLWAACLEYAQRDRRFG 300
>gi|20429122|emb|CAD24431.1| undecaprenyl-diphosphate synthase [Paracoccus zeaxanthinifaciens]
Length = 245
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 99/228 (43%), Positives = 139/228 (60%), Gaps = 2/228 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG PR GHR+G E +IV A E+G+ LTI+AFS NW+R
Sbjct: 19 PRHVAIIMDGNGRWATERGWPRLVGHRRGAERVKQIVRACPELGVDWLTIYAFSTENWKR 78
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+K+ + ++++ + +++R IG R LD + ++ E +T NT L
Sbjct: 79 STEEVLGLMKIFRRYIEREAVGMASEGVRMRFIGGRERLDRKLQDLMASIEARTAGNTRL 138
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL +A NY RDE++RA + + I +G + + +A +DT+ PDPDL+IRT G
Sbjct: 139 NLTVAINYGGRDELTRASTRLARKIAAGEI--ETPTEADLADCMDTAGHPDPDLVIRTSG 196
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E R S+FL WQ AYSE+ F P WPDF+ + L Y +RDRRFGG
Sbjct: 197 ETRTSNFLPWQAAYSEYEFTPTLWPDFTPQHLSDILGNYGMRDRRFGG 244
>gi|46445955|ref|YP_007320.1| undecaprenyl pyrophosphate synthetase [Candidatus Protochlamydia
amoebophila UWE25]
gi|46399596|emb|CAF23045.1| probable undecaprenyl pyrophosphate synthetase [Candidatus
Protochlamydia amoebophila UWE25]
Length = 258
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 99/238 (41%), Positives = 141/238 (59%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ S+ S P HI II DGN RWA R GHR+G ++ E V AA E+GIK +T +
Sbjct: 21 LESLNFSRIPQHIAIIPDGNRRWARKRLSSSNEGHREGADILMETVKAAKELGIKAITFY 80
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
FS NW R EIS L+ L S+L + S+ +N IK+ IG L + + LKE +
Sbjct: 81 TFSTENWSRSFDEISALMLLFASYLSEQCDSMIQNGIKLETIGELDPLPEFLKDTLKETK 140
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T ++L +A NY SR+E+ RA I ++E G++ +V+ + IA+YLDT PD
Sbjct: 141 KATCACDQIDLILAMNYGSRNELQRAFTRILDEVEQGNLKKEEVNETTIAQYLDTHQWPD 200
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
P+L+IRT GE R+S+FLLWQ++Y+E P WPDF+ A+ Y R+RR+GG+
Sbjct: 201 PELLIRTSGEMRISNFLLWQISYTEIYIAPVLWPDFTPNHLLEAIVDYQKRERRWGGV 258
>gi|260551689|ref|ZP_05825763.1| undecaprenyl pyrophosphate synthetase [Acinetobacter sp. RUH2624]
gi|260405432|gb|EEW98926.1| undecaprenyl pyrophosphate synthetase [Acinetobacter sp. RUH2624]
Length = 250
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 90/233 (38%), Positives = 142/233 (60%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IIMDGN R+A + + GHR+G + + IV + ++ LT+FAFS NW
Sbjct: 9 LPKHVAIIMDGNNRFAKKNQMQKGDGHREGKNILDPIVEHCIKTSVRALTVFAFSSENWN 68
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ L+KL++ + + +KK NI +R IG+R L ++ ++++AE QT +
Sbjct: 69 RPQYEVDLLMKLLEETIHEQIPRMKKFNIALRFIGDRSRLPSHLVALMEDAEQQTVHHDT 128
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ L IA +Y +I+ A K + Q + G + + ++ L KY+ +D+P DL+IRTG
Sbjct: 129 MTLTIAISYGGMWDIANAAKQVAQAVSRGEIDADQINVDLFEKYVSLNDLPAVDLLIRTG 188
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
G+ R+S+FLLWQ AY+E F WP+F+ E F HALN ++ R+RRFG S++
Sbjct: 189 GDFRISNFLLWQAAYAELYFTDTLWPEFTVEEFDHALNVFSGRERRFGKTSEQ 241
>gi|268679085|ref|YP_003303516.1| undecaprenyl diphosphate synthase [Sulfurospirillum deleyianum DSM
6946]
gi|268617116|gb|ACZ11481.1| undecaprenyl diphosphate synthase [Sulfurospirillum deleyianum DSM
6946]
Length = 228
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 92/230 (40%), Positives = 139/230 (60%), Gaps = 7/230 (3%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ +IMDGNGRWA +G R GH++G + EI A+++GIK LT++AFS NW RP
Sbjct: 6 HLAMIMDGNGRWAKRQGKERSFGHKEGAKKVREITKYASKMGIKYLTLYAFSTENWNRPK 65
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+E++ L+KL+ +L +L +NNI+ VIG+ + + A++QT TGL
Sbjct: 66 AEVAVLMKLLSKYLHSEIPTLLENNIRFDVIGDMSKFSTTLQQEIVYAKEQTAHCTGLTQ 125
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A NY + DEI RAI+ + ++ ++ +LDT+ +P DL+IRTGG+
Sbjct: 126 VLAINYGAHDEILRAIQKSLH-------VNGEITKEILESHLDTAGMPPVDLLIRTGGDG 178
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RLS+FLLWQVAY+E F WPDFS +++Y R+RRFG + ++
Sbjct: 179 RLSNFLLWQVAYAELFFSKTLWPDFSVGELETIVSEYTQRERRFGAVIEE 228
>gi|291544888|emb|CBL17997.1| Undecaprenyl pyrophosphate synthetase [Ruminococcus sp. 18P13]
Length = 246
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 87/233 (37%), Positives = 123/233 (52%), Gaps = 1/233 (0%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
P HIG I+DGNGRWA RGLPR GHR+G + F I + I ++ +AFS
Sbjct: 15 PEKRPRHIGFILDGNGRWAKKRGLPRKLGHREGAKTFKTIARYCRNLNIPYISFYAFSTE 74
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW+RP E+ L+KL ++ K+ +G++ ++ + E T
Sbjct: 75 NWKRPKDEVDALMKLFDQYID-DVREFFDLETKLIFLGDKERFTPELREKMLAVERDTAH 133
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
+ + IA NY RDEI A K + Q + G + + A+YL T+ VPD DL+I
Sbjct: 134 FDKMTMMIAINYGGRDEIVHAAKQVAQLAKDGQLDPDTLTEEQFAQYLYTAGVPDVDLLI 193
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
R GE RLS++++WQ AY+EF F WPDFS + AL + R RRFGG+
Sbjct: 194 RPSGELRLSNYMIWQCAYAEFYFTNVLWPDFSPKELDKALIDFAGRGRRFGGV 246
>gi|288560262|ref|YP_003423748.1| undecaprenyl pyrophosphate synthetase UppS [Methanobrevibacter
ruminantium M1]
gi|288542972|gb|ADC46856.1| undecaprenyl pyrophosphate synthetase UppS [Methanobrevibacter
ruminantium M1]
Length = 254
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 87/240 (36%), Positives = 136/240 (56%), Gaps = 3/240 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARG-LPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
++ + P H+ IIMDGN R++ +G + GH G + +++ + ++GI+ +T
Sbjct: 14 LMNELDPDRMPRHVAIIMDGNRRYSRMKGDMEVIKGHELGADTLEKVLDWSIDLGIEIVT 73
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFS N+ RP E+ L++L KK + K+ ++V+V+G L DD+ +
Sbjct: 74 AYAFSTENFNRPEHEVEGLMRLFVENFKKIVDHEKIHKHKVRVKVVGRIELLPDDVREAI 133
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
KEAED T+ +A Y R EI AIK I++ +E G + D+D +L+++ L T+
Sbjct: 134 KEAEDSTKQYNERLFNLAIGYDGRLEIVDAIKKIYKKVEDGEISIDDIDENLVSENLYTA 193
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+ DP LIIRT GE+RLS FLLWQ +YSE F WP+ + + A+ Y RDRRFG
Sbjct: 194 GLEDPSLIIRTSGEERLSGFLLWQSSYSELYFCDSLWPELRKVDYLRAIRDYQERDRRFG 253
>gi|257439606|ref|ZP_05615361.1| di-trans,poly-cis-decaprenylcistransferase [Faecalibacterium
prausnitzii A2-165]
gi|257197973|gb|EEU96257.1| di-trans,poly-cis-decaprenylcistransferase [Faecalibacterium
prausnitzii A2-165]
Length = 239
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 100/226 (44%), Positives = 149/226 (65%), Gaps = 1/226 (0%)
Query: 14 IGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVS 73
IGIIMDGNGRWA RGLPR AGH+KG VF +I E+G+ ++T +AFS NW+RP+
Sbjct: 15 IGIIMDGNGRWAKQRGLPRTAGHKKGAAVFQDIANYCEELGVSSVTFYAFSTENWKRPLE 74
Query: 74 EISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLF 133
E+S ++KL +L KGF + K NI+++ +G+R +LD + ++ E E+ + TG+ L
Sbjct: 75 EVSAIMKLFGEYLLKGF-NYKDRNIRIKFLGDRAALDAKLQKLMNELEEDSAAKTGMTLN 133
Query: 134 IAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKR 193
IA NY R EI RA + + Q + G++ D+ +++ ++ T+ DPD I+R GEKR
Sbjct: 134 IAVNYGGRPEIVRAARQLAQQVAEGTLKPEDITEEMMSDHMYTAGQKDPDFILRPSGEKR 193
Query: 194 LSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
LS+F+LWQ AY+E V + WPDF+R+ A+ ++N R RRFGG+
Sbjct: 194 LSNFMLWQAAYAELVEMDVLWPDFTRDDLDAAITEFNKRSRRFGGI 239
>gi|299769702|ref|YP_003731728.1| undecaprenyl pyrophosphate synthetase [Acinetobacter sp. DR1]
gi|298699790|gb|ADI90355.1| undecaprenyl pyrophosphate synthetase [Acinetobacter sp. DR1]
Length = 250
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 91/233 (39%), Positives = 142/233 (60%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IIMDGN R+A + + GHR+G V + IV + GI+ LT+FAFS NW
Sbjct: 9 LPKHVAIIMDGNNRFAKKNQMQKGDGHREGKNVLDPIVEHCKKTGIRALTVFAFSSENWN 68
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ L+KL++ + + +KK NI +R IG+R L ++ ++++AE QT +
Sbjct: 69 RPQYEVDLLMKLLEESIHEQIPRMKKFNIALRFIGDRSRLSSHLVALMEDAEQQTAHHDT 128
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ L IA +Y +I+ A K + + + G + ++ L KY+ +D+P DL+IRTG
Sbjct: 129 MTLTIAISYGGMWDIANAAKQVAEAVSRGEFSADQINVDLFEKYVSLNDLPAVDLLIRTG 188
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
G+ R+S+FLLWQ AY+E F WP+F+ + F HALN ++ R+RRFG S++
Sbjct: 189 GDYRISNFLLWQAAYAELYFTEALWPEFTVKEFDHALNVFSGRERRFGKTSEQ 241
>gi|326316577|ref|YP_004234249.1| Undecaprenyl pyrophosphate synthase [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323373413|gb|ADX45682.1| Undecaprenyl pyrophosphate synthase [Acidovorax avenae subsp.
avenae ATCC 19860]
Length = 244
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 93/240 (38%), Positives = 131/240 (54%), Gaps = 7/240 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
S S + P HI I+MDGNGRWA R LPR AGH++G+E E G+ LT+FA
Sbjct: 1 MSTASPAIPHHIAIVMDGNGRWATRRFLPRLAGHKQGVESLKRCARECVERGVAVLTVFA 60
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW RP E+S L+ L+ L + L+K+ +++ +G + +L + + L +AE
Sbjct: 61 FSSENWNRPAEEVSGLMDLLAKALAREVPQLQKDGVRLHFVGEKSTLSEKVRAGLAQAEA 120
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T N L L + FNY R +I Q + + + + + + + VPDP
Sbjct: 121 STAHNERLVLNVCFNYGGRWDI-------AQAASALAARGEPITEASLHTAMGLAHVPDP 173
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL+IRTGGE R+S+FLLWQ AYSE F WPDF A+ Y R+RRFG S++
Sbjct: 174 DLVIRTGGEMRISNFLLWQCAYSELYFSDRLWPDFDGAALDQAIAAYGARERRFGKTSEQ 233
>gi|167646763|ref|YP_001684426.1| undecaprenyl diphosphate synthase [Caulobacter sp. K31]
gi|167349193|gb|ABZ71928.1| undecaprenyl diphosphate synthase [Caulobacter sp. K31]
Length = 259
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 99/228 (43%), Positives = 141/228 (61%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA R LPR GHR G+ V AA +G+ +T+F FS NW RP
Sbjct: 24 HVAIIMDGNGRWAKRRNLPRVLGHRAGVNALKRTVEGAAALGVGVMTVFGFSTENWSRPP 83
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+SEL+ L+K++L+ L + +KVR+IG R L D+L V++ AE +T N L
Sbjct: 84 QEVSELMGLLKAYLESDIDRLAREGVKVRIIGRRTGLAADVLAVIERAESRTSQNNDFLL 143
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+AFNY R +I+ A + + +E G + D+D ++ L TS P PD+I+RT GE+
Sbjct: 144 QVAFNYGGRADITDAARAFAELVERGEARAADLDEAMFGSLLSTSGAPAPDVIVRTSGEQ 203
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
R+S+FLLW+ AY+E V+ WPD+ E AL +Y RDRR+GG++
Sbjct: 204 RISNFLLWECAYAELVYQDVLWPDYGPEHLAAALTEYRSRDRRYGGIA 251
>gi|50084552|ref|YP_046062.1| undecaprenyl pyrophosphate synthetase [Acinetobacter sp. ADP1]
gi|73920182|sp|Q6FCH1|UPPS_ACIAD RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|49530528|emb|CAG68240.1| undecaprenyl pyrophosphate synthetase (di-trans,
poly-cis-decaprenylcistransferase) [Acinetobacter sp.
ADP1]
Length = 249
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 92/235 (39%), Positives = 139/235 (59%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P H+ IIMDGN R+A + + GHR+G + IV G++ LT+FAFS N
Sbjct: 7 SHLPKHVAIIMDGNNRFAKKNQMQKGDGHREGKNSLDPIVEHCCTRGVQALTVFAFSSEN 66
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP E+ L+KL++ + + ++K NI +R IG+R L + + ++ AE++T
Sbjct: 67 WNRPAFEVDLLMKLLEEAIHEQLPRMRKFNIALRFIGDRSKLSEHLTDLMTHAENETAHF 126
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T + L IA +Y +I+ A K I +D+ G V +D+ L +Y+ + +P DL+IR
Sbjct: 127 TSMTLTIAISYGGMWDITDAAKQIAKDVSDGIVDIEQIDTHLFGRYVSLNQLPPVDLLIR 186
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGG+ RLS+FLLWQ AY+E F WP+FS + F HAL + R+RRFG S++
Sbjct: 187 TGGDYRLSNFLLWQAAYAELYFTETLWPEFSIDEFDHALAVFAGRERRFGKTSEQ 241
>gi|269792545|ref|YP_003317449.1| undecaprenyl diphosphate synthase [Thermanaerovibrio
acidaminovorans DSM 6589]
gi|269100180|gb|ACZ19167.1| undecaprenyl diphosphate synthase [Thermanaerovibrio
acidaminovorans DSM 6589]
Length = 238
Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats.
Identities = 95/239 (39%), Positives = 138/239 (57%), Gaps = 6/239 (2%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
++ M P H+GIIMDGNGRWA RGLPR GH G++ V AA ++GI+ L+++
Sbjct: 5 LSEDMMDRVPSHVGIIMDGNGRWAQERGLPRIMGHHAGVKKVEVAVRAAKDLGIRYLSLY 64
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+R E+ L+ L + ++K L++ ++ G+ L DD+ ++ E
Sbjct: 65 AFSSENWKRGRGEVGGLMGLFRYYIKMKVRQLREEGGRLLFAGSADGLPDDVREIMAYGE 124
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+TR + + L + NY R EI A+ +D D+D ++L D+PD
Sbjct: 125 QETRHCSDITLVVCLNYGGRREILDAVGKAVRDGV------QDLDEETFRRFLYLPDLPD 178
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
PDLIIRTGGE R+S+F L+Q AYSE F P+YWPDF R+ A+ Y RDRR+GG+
Sbjct: 179 PDLIIRTGGEMRISNFWLFQCAYSELYFSPKYWPDFDRDDLVEAVMDYVRRDRRYGGVK 237
>gi|222110430|ref|YP_002552694.1| undecaprenyl diphosphate synthase [Acidovorax ebreus TPSY]
gi|221729874|gb|ACM32694.1| undecaprenyl diphosphate synthase [Acidovorax ebreus TPSY]
Length = 244
Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats.
Identities = 89/237 (37%), Positives = 130/237 (54%), Gaps = 7/237 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ + P HI I+MDGNGRWA R LPR AGHR+G+E V A + G+ LT+FAFS
Sbjct: 4 VQGAIPHHIAIVMDGNGRWATRRFLPRLAGHRQGVESLRRCVHACVQRGVGVLTVFAFSS 63
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+S L+ L+ L + L ++ ++V +G + + + L+ AE T
Sbjct: 64 ENWNRPADEVSGLMDLLAKALTREVPQLARDGVQVHFVGEKSGISAQVREGLQRAEAATA 123
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N L L + FNY R +I++ + + + + + + + VPDPDL+
Sbjct: 124 SNQRLVLNVCFNYGGRWDITQ-------AAAALAARGEPITEASLHAAMGMAHVPDPDLL 176
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTGGE+R+S+FLLWQ AY+E F WPDF A+ + R+RRFG S +
Sbjct: 177 IRTGGERRISNFLLWQAAYTELYFSDRLWPDFDEAALDEAIADFAARERRFGQTSDQ 233
>gi|294084084|ref|YP_003550842.1| di-trans-poly-cis-decaprenylcistransferase [Candidatus
Puniceispirillum marinum IMCC1322]
gi|292663657|gb|ADE38758.1| Di-trans-poly-cis-decaprenylcistransferase [Candidatus
Puniceispirillum marinum IMCC1322]
Length = 249
Score = 269 bits (687), Expect = 3e-70, Method: Composition-based stats.
Identities = 98/230 (42%), Positives = 143/230 (62%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H IIMDGN RWA RGL GH +G E ++ AA + I+ LT FAFS NW
Sbjct: 3 KTPHHTAIIMDGNRRWAKGRGLDIIRGHNQGAESLKDVCRAAPQGQIRWLTAFAFSAQNW 62
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+S L+KL++ FL + L NNI++RVIGNR + D+ ++ ++E T NT
Sbjct: 63 SRPEPEVSGLLKLMRLFLMREIEELIHNNIRLRVIGNRGNFSTDLQQLISKSETLTAENT 122
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GLNL IA ++ + +I++A + I +++ +G + V++ + L T+ +P DL+IRT
Sbjct: 123 GLNLTIALDFGGQQDITQATRQIAEEVAAGVIDPKLVNNDFLKSRLQTAVLPPVDLLIRT 182
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GGEKR+S+FLLW ++Y+E F YWPDF A+ ++N R+RRFGG
Sbjct: 183 GGEKRISNFLLWDLSYAELYFSDTYWPDFKASDLEVAITEFNNRERRFGG 232
>gi|299067463|emb|CBJ38662.1| undecaprenyl pyrophosphate synthetase (di-trans,
poly-cis-decaprenylcistransferase) [Ralstonia
solanacearum CMR15]
Length = 258
Score = 269 bits (687), Expect = 3e-70, Method: Composition-based stats.
Identities = 98/241 (40%), Positives = 143/241 (59%), Gaps = 2/241 (0%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+A ++ P H+ IIMDGNGRWA R LPR AGH +G++ +V AA G++ LT+F
Sbjct: 7 LAVPDTADTPHHVAIIMDGNGRWATERHLPRMAGHSRGLDAVRAVVQAADRRGVRYLTLF 66
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP EIS L+KL + L++ L + I++RV+G+ + I +++EAE
Sbjct: 67 AFSSENWRRPAEEISFLMKLFMTALRREVSKLNDSGIRLRVVGDLNAFSPRIQLMIREAE 126
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T N GL + IA NY R +I +A++ + D + + ++ Y+ + +
Sbjct: 127 AKTAANPGLTVTIAANYGGRWDILQAMRALVAD--QPDIAPEAITEEALSPYMALAYASE 184
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL IRTGGE+R+S+F+LWQ+AYSE F YWPDF A Y R+RRFG S
Sbjct: 185 PDLFIRTGGEQRISNFMLWQLAYSELYFTERYWPDFDAAEMDRAFAWYRNRERRFGRTSA 244
Query: 242 K 242
+
Sbjct: 245 Q 245
>gi|271963863|ref|YP_003338059.1| undecaprenyl pyrophosphate synthetase [Streptosporangium roseum DSM
43021]
gi|270507038|gb|ACZ85316.1| undecaprenyl pyrophosphate synthetase [Streptosporangium roseum DSM
43021]
Length = 259
Score = 269 bits (687), Expect = 3e-70, Method: Composition-based stats.
Identities = 90/229 (39%), Positives = 128/229 (55%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ I+MDGNGRWA RGLPR GH+ G +++ A E+G+ L+ +AFS NW+
Sbjct: 23 VPRHVAIVMDGNGRWAKQRGLPRTEGHKAGEASLFDVIEGAIELGVPYLSAYAFSTENWK 82
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ L+ + +++ L ++VR G L ++ L++AE T N+
Sbjct: 83 RSPDEVRFLMGFNRDVIRRRRDDLHAMGVRVRWAGRPGRLWKSVIQELQDAERMTERNST 142
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L NY R EI A + QDI +G V V A+YLD ++PD DL +R+
Sbjct: 143 LTLQFCVNYGGRAEIVDAALRLAQDIAAGRVRPGRVKEETFARYLDEPEIPDVDLFLRSS 202
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GE+R S+FL+WQ AY+E VF+ WPDF R + A Y RDRR+GG
Sbjct: 203 GEQRTSNFLIWQTAYAEMVFLNRLWPDFDRRDLWEACETYAKRDRRYGG 251
>gi|20094204|ref|NP_614051.1| undecaprenyl pyrophosphate synthase [Methanopyrus kandleri AV19]
gi|42559839|sp|Q8TXA7|UPPS_METKA RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|19887226|gb|AAM01981.1| Undecaprenyl pyrophosphate synthase [Methanopyrus kandleri AV19]
Length = 271
Score = 269 bits (687), Expect = 3e-70, Method: Composition-based stats.
Identities = 83/240 (34%), Positives = 129/240 (53%), Gaps = 2/240 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P+H+GIIMDGN R+A GL GHR G + +++ ++G+K +T+
Sbjct: 32 LEEKVKEGRVPEHVGIIMDGNRRFARELGLEPWEGHRYGADKLEDVLEWCLDLGVKAVTV 91
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+A S N RP E+ L L++ K + + + VR +G L + +K
Sbjct: 92 YALSTENLNRPKEELKRLFDLMEERFKALAESERIHRRKVAVRAVGRLHLLPTRVRRAIK 151
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
+AE T+ L +A Y R EI A++ I D++ G + ++D KY+ D
Sbjct: 152 KAERATKEYKDRFLNVAVAYGGRQEIIDAVREIAHDVKVGRLDPDEIDEGTFRKYVYVGD 211
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+PDP+LIIRT GE+RLS+FLLW AYSE F+ YWP+F + A+ ++ R+RRFG
Sbjct: 212 LPDPELIIRTSGEERLSNFLLWYSAYSELYFVDVYWPEFRKIDLLRAIREFQKRERRFGR 271
>gi|297793407|ref|XP_002864588.1| hypothetical protein ARALYDRAFT_496002 [Arabidopsis lyrata subsp.
lyrata]
gi|297310423|gb|EFH40847.1| hypothetical protein ARALYDRAFT_496002 [Arabidopsis lyrata subsp.
lyrata]
Length = 310
Score = 269 bits (687), Expect = 3e-70, Method: Composition-based stats.
Identities = 104/231 (45%), Positives = 143/231 (61%), Gaps = 2/231 (0%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IIMDGNGRWA RGL GHR G+E EIV + GI+ LT+FAFS +NW
Sbjct: 77 MPKHVAIIMDGNGRWAKNRGLQPWDGHRAGVEALKEIVKLCGKWGIQVLTVFAFSTDNWI 136
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP EI L L + LK F +L +NN+++ +IG+ L +L V+ E E+ T+ NT
Sbjct: 137 RPRIEIDFLFSLFERSLKSEFQNLAENNVRISIIGDSSKLPKSLLRVINEIEEVTKNNTR 196
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS--DVPDPDLIIR 187
L L +A YS + ++ +A + I Q ++ G + ++D LI + L+T+ + P PDL+IR
Sbjct: 197 LQLIVAVGYSGKYDVLQACRGIAQRVKDGEIEVEEIDERLIEEELETNCTEFPYPDLLIR 256
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
T GE R+S+FLLWQ+AY+E F E WPDF R F AL + R RRFGG
Sbjct: 257 TSGELRVSNFLLWQLAYTELFFAQELWPDFGRSGFIEALTSFQQRQRRFGG 307
>gi|73748218|ref|YP_307457.1| undecaprenyl diphosphate synthase [Dehalococcoides sp. CBDB1]
gi|73659934|emb|CAI82541.1| undecaprenyl diphosphate synthase [Dehalococcoides sp. CBDB1]
Length = 236
Score = 269 bits (687), Expect = 3e-70, Method: Composition-based stats.
Identities = 100/234 (42%), Positives = 142/234 (60%), Gaps = 4/234 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
++++PPDHI IIMDGNGRWA RGL R GH+ G+E ++ + +G+K +T+++FS
Sbjct: 7 INNTPPDHIAIIMDGNGRWAERRGLSRLEGHKAGLENARRVIRHLSSLGVKYVTLYSFST 66
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP +EI L LI + L NNI++R +G+ L + L+ +T
Sbjct: 67 ENWKRPDAEIKGLFGLINDVISSYIPELAGNNIRLRHLGHLDKLPAMLKHKLESLLSETS 126
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N+GL L +AF+Y RDEI +A+K + +D + + L A YL T+ +P+ LI
Sbjct: 127 QNSGLTLSLAFDYGGRDEIIQAVKKLVKD----RIEPDKISEELFAGYLFTTGIPEAGLI 182
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRTGGE RLS+FLLWQ AYSE F WPDF + A++ +N R RRFGGL
Sbjct: 183 IRTGGEIRLSNFLLWQSAYSELYFSEVMWPDFGEKEIDRAISAFNQRQRRFGGL 236
>gi|322379054|ref|ZP_08053457.1| putative undecaprenyl pyrophosphate synthase [Helicobacter suis
HS1]
gi|321148546|gb|EFX43043.1| putative undecaprenyl pyrophosphate synthase [Helicobacter suis
HS1]
Length = 228
Score = 269 bits (687), Expect = 3e-70, Method: Composition-based stats.
Identities = 96/229 (41%), Positives = 138/229 (60%), Gaps = 6/229 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ IIMDGNGRWA +G PR GHRKG+ V I A+ I+ LT++AFS NW R
Sbjct: 6 PEHLAIIMDGNGRWAKQQGKPRTYGHRKGVGVLRNITVWCAQNQIRYLTLYAFSTENWSR 65
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+ L+ ++K +LK+ + +NNI+ +VIG+ + + E +T N L
Sbjct: 66 PQTEVDFLMGILKKYLKEERATYLENNIRFKVIGDLKKFSPSLQKTILNLEQETTHNNAL 125
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY SRDEI+RA N+ + G + LIA++LDT+ +PD DL++RTGG
Sbjct: 126 TQVLALNYGSRDEIARACINLIKKGAKGDM------QHLIAQHLDTAGLPDVDLLVRTGG 179
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+FLLWQ +Y+E F P WPDF+ + +N R R+FG +
Sbjct: 180 EMRLSNFLLWQSSYAELFFSPVLWPDFTPAHLQEIIALFNQRQRKFGRV 228
>gi|289208667|ref|YP_003460733.1| undecaprenyl diphosphate synthase [Thioalkalivibrio sp. K90mix]
gi|288944298|gb|ADC71997.1| undecaprenyl diphosphate synthase [Thioalkalivibrio sp. K90mix]
Length = 250
Score = 269 bits (687), Expect = 3e-70, Method: Composition-based stats.
Identities = 99/242 (40%), Positives = 138/242 (57%), Gaps = 3/242 (1%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
V+S + P H+ IIMDGNGRWA ARGL R GHR+G+E V AE GI++LT+F
Sbjct: 3 VSSATDPALPGHVAIIMDGNGRWAQARGLDRSEGHREGLEATRRAVRFYAEHGIQSLTVF 62
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP +E+ L +L + ++ L + I++R IG+R + + + EAE
Sbjct: 63 AFSSENWGRPRAEVEALFELFVTAIEGELPELVERGIRLRFIGDRATFPPTLQTRMGEAE 122
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ T N G+ L +A Y R +I +A + SG + S A L T+ + D
Sbjct: 123 EATAGNEGMCLVVALGYGGRWDILQAARRWV---ASGGSEADGDAESAFAAELSTAGLAD 179
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRTGGE+R+S+FLLWQ AY+E +FI YWPD + F +L Y R RRFG +
Sbjct: 180 VDLLIRTGGEQRISNFLLWQAAYAEILFIETYWPDVGVKDFERSLAWYAQRQRRFGRVPA 239
Query: 242 KG 243
Sbjct: 240 GA 241
>gi|227357245|ref|ZP_03841602.1| Di-trans,poly-cis-decaprenylcistransferase [Proteus mirabilis ATCC
29906]
gi|227162508|gb|EEI47497.1| Di-trans,poly-cis-decaprenylcistransferase [Proteus mirabilis ATCC
29906]
Length = 233
Score = 269 bits (687), Expect = 3e-70, Method: Composition-based stats.
Identities = 87/225 (38%), Positives = 137/225 (60%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA +G R GHR GI+ + V+ + + I++LT++AFS NW RP E+S
Sbjct: 1 MDGNGRWAKKQGKLRVTGHRAGIKAVRDAVSFSVKHKIESLTLYAFSSENWNRPEQEVSS 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L L SL K+N+++ +IG+ + +K + T NTGLNL IA N
Sbjct: 61 LMELFVFALDNEVKSLHKHNVRLTIIGDISRFSRRLQDRIKNSVALTANNTGLNLNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I+++++ + + G + D++ + I+ +L D DL+IRTGGE R+S+F
Sbjct: 121 YGGRWDITQSVQQLASSLAKGELAIEDINENAISSHLCLHDQSPVDLVIRTGGEHRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+WQ+AY+E F WPDF ++F +AL+ + R+RRFGG + +
Sbjct: 181 LIWQIAYAELYFTQVLWPDFDEQVFQNALDAFAKRERRFGGTTSE 225
>gi|269118694|ref|YP_003306871.1| undecaprenyl diphosphate synthase [Sebaldella termitidis ATCC
33386]
gi|268612572|gb|ACZ06940.1| undecaprenyl diphosphate synthase [Sebaldella termitidis ATCC
33386]
Length = 231
Score = 269 bits (687), Expect = 3e-70, Method: Composition-based stats.
Identities = 94/237 (39%), Positives = 135/237 (56%), Gaps = 6/237 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M P+HI IIMDGNGRWA +RGL R GH++G + ++ + G+K LT++AFS
Sbjct: 1 MDRKIPEHIAIIMDGNGRWAKSRGLARVEGHKRGADTLEFVLRQSVSFGVKYLTVYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP +E+S L+ L +L LK+ +I++ V G + +L +KE ED
Sbjct: 61 ENWKRPKTEVSALMNLFSKYLDNKKDELKEQDIRLVVSGTEEGVSKKLLKKIKETEDYLS 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
L IAFNY R EI+ I + + + + YL D+PDP+L+
Sbjct: 121 DCNTLTFNIAFNYGGRKEITDGINKLLAEGRTS------ITEDEFQNYLYQPDIPDPELV 174
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRT GE R+S+FLLW++AYSEF YWPDF + + A+ +N R+RRFGG+ K
Sbjct: 175 IRTSGEFRISNFLLWEIAYSEFYITNTYWPDFDKNEYEKAIEWFNNRERRFGGVDAK 231
>gi|13541431|ref|NP_111119.1| undecaprenyl pyrophosphate synthase [Thermoplasma volcanium GSS1]
gi|42560004|sp|Q97B58|UPPS_THEVO RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|14324815|dbj|BAB59742.1| hypothetical protein [Thermoplasma volcanium GSS1]
Length = 258
Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats.
Identities = 92/240 (38%), Positives = 132/240 (55%), Gaps = 2/240 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + P H+GII DGN R+A G+P GH KG E++ E+ IK +T
Sbjct: 19 LMEEVKKYPRPRHVGIITDGNRRYARIVGIPENEGHVKGKNKVEEVLDWCMELDIKIVTF 78
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLK--KNNIKVRVIGNRLSLDDDILCVLK 118
+AFS N++R E+ L LI + KN I V+VIGN L + + +K
Sbjct: 79 YAFSTENFKRSPEEVDFLFHLINDAFISLLKDERVYKNKINVKVIGNVSMLPEYLRETIK 138
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
E+ T+ + ++ +A Y R+EI AIK I +D +G + ++D S YL +
Sbjct: 139 ITEETTKNFSNYHMNLAIGYGGREEILDAIKRIARDAIAGKINVDEIDESKFRNYLYDGN 198
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+PDPDLI+RT GE+R+S+FLLWQ AYSE F YWP+FS+ F A+ Y R RRFG
Sbjct: 199 LPDPDLILRTSGEERISNFLLWQSAYSELYFSDVYWPEFSKLDFLRAIYSYQRRQRRFGR 258
>gi|50955077|ref|YP_062365.1| undecaprenyl pyrophosphate synthetase [Leifsonia xyli subsp. xyli
str. CTCB07]
gi|50951559|gb|AAT89260.1| undecaprenyl pyrophosphate synthetase [Leifsonia xyli subsp. xyli
str. CTCB07]
Length = 268
Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats.
Identities = 90/231 (38%), Positives = 138/231 (59%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
++ P+H+ I+MDGNGRWA +GL R GHR G ++VA A +VG+K+L+++AFS N
Sbjct: 30 TAIPEHVAIVMDGNGRWANRQGLTRIEGHRAGEASLLDVVAGAIQVGVKHLSVYAFSTEN 89
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W+R E+ L+ + L + L + ++VR G + L ++ L+ AE T N
Sbjct: 90 WKRSPDEVRFLMGFNREVLHRRRDQLNEWGVRVRWAGRKPRLWSSVIKELQYAEQLTAGN 149
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L L + NY R EI+ A+++I +++ +G + V I ++L D PD DL +R
Sbjct: 150 DVLTLTMCVNYGGRTEIADAVRSIAEEVAAGRLKPSAVGEKTIQRHLYLPDTPDVDLFVR 209
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+ GE+R S+FLLWQ AY+E VF+ WPDFSR + A+ + R+RRFGG
Sbjct: 210 SSGEQRTSNFLLWQSAYAEMVFLDRLWPDFSRTDLWEAIELFARRNRRFGG 260
>gi|45358908|ref|NP_988465.1| undecaprenyl pyrophospahte synthetase-like protein [Methanococcus
maripaludis S2]
gi|45047774|emb|CAF30901.1| undecaprenyl pyrophospahte synthetase related protein
(Di-trans-poly-cis-decaprenylcistransferase)
[Methanococcus maripaludis S2]
Length = 264
Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats.
Identities = 83/242 (34%), Positives = 133/242 (54%), Gaps = 4/242 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + PP H+GIIMDGN R A G GH G +E++ + I +T+
Sbjct: 23 LESKISKYPPPKHVGIIMDGNRRLAKKLGENPELGHNLGASKVHEVIDWCVSLKIPTITL 82
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFS+ N+ RP E+ L+ L + + + K+ I+V VIG R L + + +
Sbjct: 83 YAFSLENFNRPEKEVKVLMDLFEREFIEIADHPDVHKDKIRVSVIGRREMLPEYVQKAIN 142
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
AED+T+ + + A Y + EI ++K I + +++G + D++ LI+K L TS+
Sbjct: 143 YAEDKTKGYSDYFVNFAIAYGGQQEIIDSVKKIAKQVKNGEIDIEDINIELISKNLYTSN 202
Query: 179 V--PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
+ P+PDLIIRT GE+R+S+FL WQ YSE F YWP F + ++ +Y R+RR+
Sbjct: 203 LPSPNPDLIIRTSGEERISNFLTWQSCYSELYFCETYWPTFRKVDLLRSIREYQKRERRY 262
Query: 237 GG 238
G
Sbjct: 263 GK 264
>gi|187251115|ref|YP_001875597.1| undecaprenyl diphosphate synthase [Elusimicrobium minutum Pei191]
gi|186971275|gb|ACC98260.1| Undecaprenyl diphosphate synthase [Elusimicrobium minutum Pei191]
Length = 228
Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats.
Identities = 95/234 (40%), Positives = 135/234 (57%), Gaps = 6/234 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M P HI IMDGNGRWA + +PR GH G + +++ A E+G+K +T+FAFS
Sbjct: 1 MDKKIPLHIAFIMDGNGRWAKNKNMPRNYGHEAGAKTVEKVIKKARELGVKYITLFAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP EI L+KL+ L + KKNN ++ + G R L ++IL + + T+
Sbjct: 61 ENWSRPQREIDSLMKLLSKTLARYNKDSKKNNTRLIISGRREKLPENILKDIDNVVESTK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
NT + + +A NY +R EI+ AIK + + ++ I+ + +PDPDLI
Sbjct: 121 NNTAITVNLALNYGARQEITDAIKKLVSQGKK------EITEQDISACMYQPGIPDPDLI 174
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRT GEKR+S+FLLWQ AYSEF F P WPDF A+ ++ R RR+GG+
Sbjct: 175 IRTSGEKRISNFLLWQSAYSEFYFTPVLWPDFDGAELEKAVTEFQARIRRYGGI 228
>gi|296140450|ref|YP_003647693.1| undecaprenyl diphosphate synthase [Tsukamurella paurometabola DSM
20162]
gi|296028584|gb|ADG79354.1| undecaprenyl diphosphate synthase [Tsukamurella paurometabola DSM
20162]
Length = 271
Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats.
Identities = 87/237 (36%), Positives = 134/237 (56%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ + P+H+ ++MDGNGRWA RGLPR GH +G V + V E+G+KNL+ +AF
Sbjct: 35 AIPAELVPNHVALVMDGNGRWAQERGLPRTKGHEQGEAVLMDTVCGCIEMGVKNLSAYAF 94
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW R E+ L+ + +++ + + ++VR G R L ++ L+ AE+
Sbjct: 95 STENWTRSPDEVRFLMGFNRDVIRRRRDEMNEMGVRVRWAGRRPRLWRSVIKELEVAEEL 154
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N+ + L + NY R EI A + I + + +G + + A YL D+PD D
Sbjct: 155 TKDNSVMTLTMCVNYGGRAEIVDATREIARRVAAGEISPDRITEQSFAHYLYLPDMPDVD 214
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
L +R GEKR S+FLLW+ AY+E+V+ +PDF R + A +Y RDRRFGG
Sbjct: 215 LFLRPSGEKRSSNFLLWESAYAEYVYQDTLFPDFDRRNLWEACLEYAKRDRRFGGTK 271
>gi|323359851|ref|YP_004226247.1| undecaprenyl pyrophosphate synthase [Microbacterium testaceum
StLB037]
gi|323276222|dbj|BAJ76367.1| undecaprenyl pyrophosphate synthase [Microbacterium testaceum
StLB037]
Length = 267
Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats.
Identities = 92/232 (39%), Positives = 133/232 (57%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ P+H+ I+MDGNGRWA +GL R GHR G ++VA A + G+K+L+++AFS
Sbjct: 29 KGAVPEHVAIVMDGNGRWANRQGLTRVEGHRAGEAALLDVVAGAIQAGVKHLSVYAFSTE 88
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW R E+ L+ + L + L + +++R G + L ++ L+ AE T
Sbjct: 89 NWSRSPDEVRFLMGFNREVLHRRRDQLNEWGVRIRWSGRKPRLWGSVIKELQHAERLTEG 148
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N+ L L + NY R EI A++ I DI +G + V LI K L D+PD DL +
Sbjct: 149 NSTLTLTMCVNYGGRVEIVDAMRRIGDDIAAGKLKPSAVTEKLIRKNLYQPDMPDVDLFV 208
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R+ GE+R S+FLLW+ AY+E VF+ WPDF R + A+ Y RDRRFGG
Sbjct: 209 RSSGEQRTSNFLLWESAYAEMVFLDTLWPDFRRTHLWDAIGLYLSRDRRFGG 260
>gi|218296044|ref|ZP_03496813.1| undecaprenyl diphosphate synthase [Thermus aquaticus Y51MC23]
gi|218243421|gb|EED09950.1| undecaprenyl diphosphate synthase [Thermus aquaticus Y51MC23]
Length = 263
Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats.
Identities = 91/244 (37%), Positives = 137/244 (56%), Gaps = 6/244 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + P H+G+I+DGN R+A A GLP GH G++ E++ E+GI+ +T+
Sbjct: 20 LLKEVKKGPMPRHLGLILDGNRRYARALGLPPTKGHEFGVQKAYEVLEWCLEMGIRTVTV 79
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+ FS N+RR E+ L+ L ++ + + +N ++VR IG R ++ ++
Sbjct: 80 WVFSTENFRRSPEEVEALMGLFVREAERMAEDHRILENQVQVRFIGRREGFSPEVRAAME 139
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYL 174
E +TR + G+ L IA Y R+EI A+K++ + E + +V +L I K L
Sbjct: 140 RLEARTRHHQGMVLNIAMGYGGREEIVDAVKSLLLEAEERGLSPKEVAEALTAEEIGKRL 199
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
T+ +PDPD IIRT GE RLS FLLWQ AYSEF F WP+F + F AL Y R+R
Sbjct: 200 YTAGLPDPDFIIRTSGEIRLSGFLLWQSAYSEFYFADVLWPEFRKIDFLRALRSYQARER 259
Query: 235 RFGG 238
RFG
Sbjct: 260 RFGR 263
>gi|261856046|ref|YP_003263329.1| undecaprenyl diphosphate synthase [Halothiobacillus neapolitanus
c2]
gi|261836515|gb|ACX96282.1| undecaprenyl diphosphate synthase [Halothiobacillus neapolitanus
c2]
Length = 255
Score = 268 bits (686), Expect = 5e-70, Method: Composition-based stats.
Identities = 96/239 (40%), Positives = 136/239 (56%), Gaps = 2/239 (0%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ S+ P H+ +IMDGNGRWA R LPR GH++G ++ +A I LT+FAFS
Sbjct: 17 VQPSNGPQHVAVIMDGNGRWARERHLPRSLGHQRGRRAVRRLIESARRANIPVLTLFAFS 76
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP E+ L++L L++ L N I+V+ IG+R L I + +AE+ T
Sbjct: 77 SENWTRPAEEVDALMRLFSYALERDIKDLHANGIRVQFIGDRTRLPQGICHSMTQAEELT 136
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDS--SLIAKYLDTSDVPDP 182
N GL+L IA +Y + +I +A + + E G V D + S L T++ P
Sbjct: 137 SANDGLHLMIAVSYGGQWDILQAATRLARSAERGEVDLDDETAVRSCFEANLSTANQPPV 196
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL IRTGGE+R+S+FLLWQ AY+E F WP F+ + F ALN + R RRFGG+ +
Sbjct: 197 DLFIRTGGEQRISNFLLWQSAYAELYFTSCLWPSFTEKDFRDALNWFAARQRRFGGVEE 255
>gi|300741496|ref|ZP_07071517.1| di-trans,poly-cis-decaprenylcistransferase [Rothia dentocariosa
M567]
gi|300380681|gb|EFJ77243.1| di-trans,poly-cis-decaprenylcistransferase [Rothia dentocariosa
M567]
Length = 260
Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats.
Identities = 94/231 (40%), Positives = 138/231 (59%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ ++MDGNGRWA RGLPR GHR G +IVA A E+GI ++ +AFS NW+R
Sbjct: 24 QHVAVVMDGNGRWANERGLPRNEGHRAGEAALLDIVAGAIEMGIPYISAYAFSTENWKRS 83
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE+S +++ L + +LK +++R G R L +++ L++ E +T NT
Sbjct: 84 PSEVSFIMRFSTEVLNRQLETLKSWGVRIRWAGRRPKLWKNVISQLEQCERETINNTTCT 143
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L + NY R EI+ A I QD+++G + + KYLD D+PD DL +R+ GE
Sbjct: 144 LTMCVNYGGRAEIADAAATIAQDVQAGILKPSSITEKTFQKYLDEPDLPDVDLFLRSSGE 203
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+R+S+FLLWQ AY+EFVF+ WPD R + A+ +Y RDRR+G + K
Sbjct: 204 QRISNFLLWQSAYAEFVFMNVLWPDVDRLTLYKAVEEYASRDRRYGDATDK 254
>gi|332186091|ref|ZP_08387837.1| di-trans,poly-cis-decaprenylcistransferase [Sphingomonas sp. S17]
gi|332013906|gb|EGI55965.1| di-trans,poly-cis-decaprenylcistransferase [Sphingomonas sp. S17]
Length = 238
Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats.
Identities = 99/233 (42%), Positives = 146/233 (62%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ + P H+ IIMDGNGRWA R LPR AGH+ G++ I AA +GI+ LT++AFS
Sbjct: 6 TGAVPRHVAIIMDGNGRWAKRRLLPRFAGHKAGVDAVRRIARAARAMGIEALTLYAFSSE 65
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP +EIS+L+ L++ FL+K L +N+++RVIG+ D++ ++ +A +T
Sbjct: 66 NWRRPETEISDLMGLLRIFLRKDLAELVSDNVRLRVIGDYRRFPADLVAMIDDAIARTSA 125
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTG L IA NY ++ E+ A K + + +G + + + I L T+ +P DL+I
Sbjct: 126 NTGPILAIALNYGAQAELVEAAKRLALKVAAGEMDAEAITPDAIEGELQTNGLPPLDLVI 185
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE+RLS+FLLWQ AY+E +F+ WPDF A+ ++ R RRFGGL
Sbjct: 186 RTSGEQRLSNFLLWQAAYAELLFVDTLWPDFDDAALVDAVAEFGRRHRRFGGL 238
>gi|159905711|ref|YP_001549373.1| undecaprenyl diphosphate synthase [Methanococcus maripaludis C6]
gi|159887204|gb|ABX02141.1| undecaprenyl diphosphate synthase [Methanococcus maripaludis C6]
Length = 264
Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats.
Identities = 83/242 (34%), Positives = 131/242 (54%), Gaps = 4/242 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P H+GIIMDGN R A G GH G +E++ +GI +T+
Sbjct: 23 LESKTSKYPLPKHVGIIMDGNRRLAKKLGENPELGHNLGASKVHEVIDWCVSLGIPTITL 82
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFS+ N+ RP E+ L+ L + + + KN I+V VIG R L + + +
Sbjct: 83 YAFSLENFNRPEKEVKVLMDLFEKEFLEIADHPDIHKNKIRVSVIGRREMLPEYVQKAIS 142
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
AED+T+ + + A Y + EI ++K I + +++ + D++ LI+K L TS+
Sbjct: 143 YAEDRTKEYSDYFVNFAIAYGGQQEIIDSVKKIAEKVKNNEIEIEDINVELISKNLYTSN 202
Query: 179 V--PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
+ P+PDLIIRT GE+R+S+FL WQ YSE F YWP F + ++ +Y R+RR+
Sbjct: 203 LPSPNPDLIIRTSGEERISNFLTWQSCYSELYFCETYWPTFRKVDLLRSIREYQKRERRY 262
Query: 237 GG 238
G
Sbjct: 263 GK 264
>gi|223933897|ref|ZP_03625860.1| undecaprenyl diphosphate synthase [Streptococcus suis 89/1591]
gi|223897423|gb|EEF63821.1| undecaprenyl diphosphate synthase [Streptococcus suis 89/1591]
Length = 225
Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats.
Identities = 101/225 (44%), Positives = 134/225 (59%), Gaps = 4/225 (1%)
Query: 19 DGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISEL 78
DGNGRWA R PR GH+ G++ ++ A+++G+K LT++AFS NW RP E+ +
Sbjct: 1 DGNGRWAKKRMQPRIMGHKAGMDALQKVTKTASDLGVKVLTVYAFSTENWSRPEKEVKFI 60
Query: 79 VKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNY 138
+ L F K L NN+K+++IG+ L L L +AE +T+ NTGL L A NY
Sbjct: 61 MNLPVEFYDKYVPELHANNVKIQMIGDHSKLPVPTLNALYKAEQKTKSNTGLILNFALNY 120
Query: 139 SSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLIIRTGGEKRL 194
RDE++RA+K I QD+ D+D LIA YL T + DPDL+IRT GE RL
Sbjct: 121 GGRDEVTRAVKAIAQDVLDAKFNPGDIDEKLIADYLYTGTLSPTLRDPDLVIRTSGELRL 180
Query: 195 SDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
S+FL WQ AYSE F WPDF E A+ +YN R RRFGG+
Sbjct: 181 SNFLPWQTAYSELYFTDIAWPDFDGEALKLAIKEYNRRHRRFGGV 225
>gi|227548797|ref|ZP_03978846.1| undecaprenyl pyrophosphate synthase [Corynebacterium
lipophiloflavum DSM 44291]
gi|227079127|gb|EEI17090.1| undecaprenyl pyrophosphate synthase [Corynebacterium
lipophiloflavum DSM 44291]
Length = 246
Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats.
Identities = 93/241 (38%), Positives = 139/241 (57%), Gaps = 1/241 (0%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVG-IKNLTI 60
+ ++ P HI ++MDGNGRWA RGL R GH++G V + V A E+G ++ L+
Sbjct: 3 LPNIAPEFIPRHIAVVMDGNGRWAQQRGLKRTEGHKRGEAVLMDCVDACIELGTVEWLSA 62
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NWRR E+ L+ + L+ L N+++R G R L ++ L++A
Sbjct: 63 YAFSTENWRRSAEEVRFLMGFSRDVLRNRRDDLHDKNVRIRWAGRRPRLWRSVIRELEKA 122
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
ED TR NTGL L + NY R EI ++++ G + ++ +++L D+P
Sbjct: 123 EDLTRDNTGLTLVMCVNYGGRAEIVDGVRSLVDAAAQGQIRPGEITEDTFSQWLYQPDMP 182
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
D DL +R GE+R S+FLLWQ AY+E V+ + WPDF+RE F A+ +Y RDRRFGG
Sbjct: 183 DVDLFLRPSGEQRTSNFLLWQSAYAEMVYQEKLWPDFAREDLFAAVLEYTKRDRRFGGAI 242
Query: 241 K 241
+
Sbjct: 243 E 243
>gi|258406065|ref|YP_003198807.1| undecaprenyl diphosphate synthase [Desulfohalobium retbaense DSM
5692]
gi|257798292|gb|ACV69229.1| undecaprenyl diphosphate synthase [Desulfohalobium retbaense DSM
5692]
Length = 231
Score = 268 bits (685), Expect = 6e-70, Method: Composition-based stats.
Identities = 95/232 (40%), Positives = 129/232 (55%), Gaps = 4/232 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M+S P H+ IIMDGNGRWA RGLPR GH+ G + IV A + I +T++ FS
Sbjct: 1 MTSPPLQHLAIIMDGNGRWARQRGLPRSEGHKAGTQSAKAIVTACRKRAIPYVTLYTFSR 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP EI+ L L+ FL++ LK+ I++ ++G+ L ++ QT
Sbjct: 61 ENWARPKEEINFLFDLLVRFLRREVQDLKEQGIRLNILGDLKGLPAAPRRAVEHVCRQTA 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
+ L +A NYS R+EI R + + Q V +V A+ L T PDPDL+
Sbjct: 121 DGRAMTLNLALNYSGREEILRVCRELLQQQ----VAPEEVTVEQFAQRLYTGGQPDPDLL 176
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRT GEKRLS++LL+Q AY+EF F WPDF AL++Y R RRFG
Sbjct: 177 IRTSGEKRLSNYLLFQCAYTEFSFPEVLWPDFDEHELDAALHEYQQRQRRFG 228
>gi|170782099|ref|YP_001710432.1| undecaprenyl phosphate synthetase [Clavibacter michiganensis subsp.
sepedonicus]
gi|169156668|emb|CAQ01826.1| undecaprenyl phosphate synthetase [Clavibacter michiganensis subsp.
sepedonicus]
Length = 288
Score = 268 bits (685), Expect = 6e-70, Method: Composition-based stats.
Identities = 99/235 (42%), Positives = 146/235 (62%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ + P HI ++MDGNGRWA RGLPR AGH+ G E + + VA A ++G +L+++AF
Sbjct: 24 AIPADLVPKHIAVVMDGNGRWANQRGLPRTAGHQAGEEAWFDTVAGAVQLGATHLSVYAF 83
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R +E+ L+ + + + L N+++R G R L ++ L+ AE+
Sbjct: 84 STENWKRSPAEVRFLMGFNRDVIHRRRDQLNAWNVRIRWAGRRPRLWRSVIDDLQVAEEM 143
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NTG+ L + NY R EI A+K I +D+++G + + VD I +YL DVPD D
Sbjct: 144 TKGNTGMTLTMCINYGGRTEIGDAVKRIAEDVDAGRLKASRVDERTIQRYLYLPDVPDVD 203
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L IR+ GE+R S+FLLWQ AY+E VF+ WPDF R+ + A+ Y RDRRFGG
Sbjct: 204 LFIRSSGEQRTSNFLLWQSAYAEMVFLDRLWPDFHRKDLWDAVESYVHRDRRFGG 258
>gi|325068604|ref|ZP_08127277.1| Undecaprenyl pyrophosphate synthetase [Actinomyces oris K20]
Length = 282
Score = 268 bits (685), Expect = 6e-70, Method: Composition-based stats.
Identities = 95/238 (39%), Positives = 140/238 (58%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ ++S P H+ ++MDGNGRWA ARGLPR GHR G ++ A A E+G+K L+++AFS
Sbjct: 19 LPAASLPQHVAVVMDGNGRWANARGLPRTEGHRVGEANMLDVAAGAIEIGVKELSVYAFS 78
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRR E+ ++ + L+ L N+++R IG L +L L+EAE T
Sbjct: 79 TENWRRSPGEVRFIMGFARKVLRVQRDVLNSWNVRLRWIGRTPRLWKSVLHELREAERVT 138
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NTGL L + NY R EI+ A + I +D+ +G + + ++ I +YL + + D DL
Sbjct: 139 AHNTGLTLNLCINYGGRAEIADATRAIAEDVAAGRLKASSINEKTIQRYLYSPTMRDVDL 198
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTG E+R S+FL+W +Y+E F P WPDF+R + A Y R+RR+GG K
Sbjct: 199 FIRTGDEQRTSNFLMWSSSYAELYFSPLAWPDFNRTELWKACEAYAGRERRYGGAVDK 256
>gi|149176638|ref|ZP_01855250.1| undecaprenyl pyrophosphate synthetase [Planctomyces maris DSM 8797]
gi|148844517|gb|EDL58868.1| undecaprenyl pyrophosphate synthetase [Planctomyces maris DSM 8797]
Length = 250
Score = 268 bits (685), Expect = 6e-70, Method: Composition-based stats.
Identities = 99/236 (41%), Positives = 147/236 (62%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ S P HI IIMDGNGRWA+ RG PR GHR+G+ +V + + I+ LT++ S
Sbjct: 14 LESQQLPRHIAIIMDGNGRWASRRGFPRIEGHRQGVNSVRTVVEESTRLEIEQLTLYCLS 73
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E++ L++L+K F+ + + NI+ IG R L D+L + + ++
Sbjct: 74 SENWKRPALELNLLMQLLKKFVIGEREEIMRQNIRFTTIGRRDDLPRDVLIEVDKTIRES 133
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NTG+ L +A NY SR EI A+K+I D+E G++ ++ +I+ +L TS +PDPDL
Sbjct: 134 QDNTGMQLCLALNYGSRSEIVDAVKSIVADVEQGNLKPEAINEEVISAHLYTSGMPDPDL 193
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
+IRT GE R+S+FLLWQ++Y+E YWPDF ++ AL + RDRRFGGL
Sbjct: 194 VIRTAGEMRVSNFLLWQISYAELWVTETYWPDFKVADYWQALRDFAARDRRFGGLK 249
>gi|326561011|gb|EGE11376.1| undecaprenyl pyrophosphate synthase [Moraxella catarrhalis 7169]
gi|326566760|gb|EGE16899.1| undecaprenyl pyrophosphate synthase [Moraxella catarrhalis
103P14B1]
gi|326576672|gb|EGE26579.1| undecaprenyl pyrophosphate synthase [Moraxella catarrhalis
101P30B1]
Length = 256
Score = 267 bits (684), Expect = 6e-70, Method: Composition-based stats.
Identities = 84/233 (36%), Positives = 139/233 (59%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI IIMDGN R+ ++ L AGH G + + IV +G++ LT+FAFS NW
Sbjct: 12 IPKHIAIIMDGNNRFGKSKQLATGAGHVAGKDALDPIVEHCLALGVEVLTVFAFSSENWA 71
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ L++L+ + + + ++ I++R IG+R +D D++ ++ +AE +T
Sbjct: 72 RPKDEVDLLMRLLSQTIYEQLPRMNQHRIRLRFIGDRSQIDGDLVKLMAQAEAKTADFDA 131
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ L IA +Y + +I+ A K + + +E G + + D+D +I L+ +D+P D++IRTG
Sbjct: 132 MTLVIAISYGGQWDITNAAKKLAKQVELGHLSADDIDIQMIKTQLELADLPSVDMLIRTG 191
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE R+S+FLLWQ AY+E F P WP+F + + + R+RRFG S++
Sbjct: 192 GEYRISNFLLWQTAYAELFFTPTLWPEFGCDELDEMIRIFAGRERRFGMTSEQ 244
>gi|312140281|ref|YP_004007617.1| di-trans,poly-cis-decaprenylcistransferase upps [Rhodococcus equi
103S]
gi|311889620|emb|CBH48937.1| di-trans,poly-cis-decaprenylcistransferase UppS [Rhodococcus equi
103S]
Length = 270
Score = 267 bits (684), Expect = 6e-70, Method: Composition-based stats.
Identities = 91/238 (38%), Positives = 140/238 (58%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P+H+ ++MDGNGRWA RGLPR AGH +G +V + VA E+G+K L+ +AFS
Sbjct: 33 LQPELIPNHVALVMDGNGRWAQDRGLPRTAGHERGEDVLMDTVAGCIEIGVKWLSAYAFS 92
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+R E+ L+ + +++ + + ++VR G R L ++ L+ AE+ T
Sbjct: 93 TENWKRSPEEVKFLMGFNRDVIRRRRDEMHEMGVRVRWAGRRPRLWRSVIKELEIAEELT 152
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NT + L + NY R EI+ A + I + +G + + + AKYLD D+PD DL
Sbjct: 153 KDNTVMTLTMCVNYGGRAEIADAAREIARRAAAGEIDPEKISEATFAKYLDEPDMPDVDL 212
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+R GE+R S+FL+WQ AY+E VF + +PDF R + A +Y RDRRFGG+ +
Sbjct: 213 FLRPSGEQRTSNFLIWQAAYAELVFQEKLFPDFDRRDLWAACVEYASRDRRFGGVKYQ 270
>gi|115374987|ref|ZP_01462258.1| undecaprenyl diphosphate synthase [Stigmatella aurantiaca DW4/3-1]
gi|310820543|ref|YP_003952901.1| undecaprenyl diphosphate synthase [Stigmatella aurantiaca DW4/3-1]
gi|115368014|gb|EAU66978.1| undecaprenyl diphosphate synthase [Stigmatella aurantiaca DW4/3-1]
gi|309393615|gb|ADO71074.1| Undecaprenyl diphosphate synthase [Stigmatella aurantiaca DW4/3-1]
Length = 262
Score = 267 bits (684), Expect = 6e-70, Method: Composition-based stats.
Identities = 91/242 (37%), Positives = 138/242 (57%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + P H+GIIMDGNGRWA RGLPR GHR+G E+ A VGI LT+
Sbjct: 10 LEHQVKARPVPRHVGIIMDGNGRWAEVRGLPRLEGHREGSSSVREVTRTARRVGISALTL 69
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP E++ L++L++ FL+ + + N I++ IG + + L+
Sbjct: 70 YAFSSQNWARPAEEVAGLMELLREFLESEYSEILDNGIRLNAIGEVDKMPRYVKEPLERL 129
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ N G+ L +A +Y R+EI A++ + + + +G + + + ++L T +P
Sbjct: 130 RRDSAHNQGMVLTLALSYGGREEILHAMQQVARAVANGELSPDRLGEKELEEHLWTQGLP 189
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL++RT GE R+S+FLLWQ+AY+E F WPDF E F L QY R+RRFG S
Sbjct: 190 PLDLVVRTSGEFRVSNFLLWQMAYAELCFADVLWPDFRSEAFLRCLAQYQQRERRFGLTS 249
Query: 241 KK 242
+
Sbjct: 250 AQ 251
>gi|242059291|ref|XP_002458791.1| hypothetical protein SORBIDRAFT_03g040360 [Sorghum bicolor]
gi|241930766|gb|EES03911.1| hypothetical protein SORBIDRAFT_03g040360 [Sorghum bicolor]
Length = 287
Score = 267 bits (684), Expect = 6e-70, Method: Composition-based stats.
Identities = 94/242 (38%), Positives = 142/242 (58%), Gaps = 5/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + S P H+ ++MDGN RWA ARGLP AGH G E+V + G++ LT
Sbjct: 42 LPGGLRAESLPRHVAVVMDGNSRWARARGLPSAAGHEAGRRALEEVVRLSRAWGVRALTA 101
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW RP E+ L+ + +++ ++ I++RVIG+ L + + +EA
Sbjct: 102 FAFSHENWSRPRVEVEFLMGQFERAIRESVAEFLRDGIRLRVIGDSSRLPVSLQKIAREA 161
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT---- 176
E+ TR N+ L+L +A +YS R +I +A +N+ Q + + D+D ++ A L+T
Sbjct: 162 EEATRSNSQLDLTLAISYSGRRDIVQACRNLAQKVHDKLLRPEDIDETIFADELETSHAN 221
Query: 177 SDVPD-PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
+++P+ PDL+IRT GE RLS+FLLWQ AY+E F WPDF + AL + RDRR
Sbjct: 222 AELPNYPDLLIRTSGELRLSNFLLWQSAYAELFFTDTLWPDFGEADYLEALVSFQSRDRR 281
Query: 236 FG 237
FG
Sbjct: 282 FG 283
>gi|291286435|ref|YP_003503251.1| undecaprenyl diphosphate synthase [Denitrovibrio acetiphilus DSM
12809]
gi|290883595|gb|ADD67295.1| undecaprenyl diphosphate synthase [Denitrovibrio acetiphilus DSM
12809]
Length = 244
Score = 267 bits (684), Expect = 6e-70, Method: Composition-based stats.
Identities = 92/238 (38%), Positives = 134/238 (56%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M P+H+ IIMDGNGRWA +G PR AGH KG EV +IV + +G+ LT++ FS
Sbjct: 1 MQDLKIPEHLAIIMDGNGRWAKIQGKPRIAGHSKGAEVVRDIVKYTSRLGVGYLTLYTFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
+ NW RP E+ L++L++ +LK L NNI++ V G L + V+ EA +
Sbjct: 61 MENWLRPKDEVGFLMELLEEYLKGEISELNNNNIRLTVSGRTQLLPEKTQAVVNEAVENL 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NTG+ L +A +Y R EI A K + + G + ++ +++ ++PD DL
Sbjct: 121 SKNTGMVLNLALSYGGRSEIVDAAKQMAKLALQGEIELDKIERDEFGQFMYHPEMPDIDL 180
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IRT GE R+S+F+LW+ AYSE F WPDF A +YN R RRFG ++
Sbjct: 181 LIRTSGEIRISNFMLWRCAYSELFFTDVLWPDFGTANIDEAFEEYNRRVRRFGMTDEQ 238
>gi|226954085|ref|ZP_03824549.1| undecaprenyl pyrophosphate synthetase [Acinetobacter sp. ATCC
27244]
gi|294650308|ref|ZP_06727676.1| undecaprenyl pyrophosphate synthetase [Acinetobacter haemolyticus
ATCC 19194]
gi|226835126|gb|EEH67509.1| undecaprenyl pyrophosphate synthetase [Acinetobacter sp. ATCC
27244]
gi|292823838|gb|EFF82673.1| undecaprenyl pyrophosphate synthetase [Acinetobacter haemolyticus
ATCC 19194]
Length = 249
Score = 267 bits (684), Expect = 7e-70, Method: Composition-based stats.
Identities = 88/233 (37%), Positives = 144/233 (61%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
PP H+ IIMDGN R+A + + + GHR+G V + +V G++ LT+FAFS NW
Sbjct: 9 PPQHVAIIMDGNNRFAKKKQMQKGDGHREGKNVLDPVVEHCKRSGVRALTVFAFSSENWN 68
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ L++L+K + + ++K NI +R IG+R L +++ +++EAE +T
Sbjct: 69 RPQYEVDLLMQLLKETIYEQLPRMEKFNIALRFIGDRSRLSEELRDLMQEAEQKTAAFDS 128
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ L IA +Y +++ A K+I +D+ +G + + ++ L KY+ +D+P DL+IRTG
Sbjct: 129 MTLSIAISYGGMWDMAHAAKSIAEDVVAGKLQTDQINVDLFDKYVSLNDLPAVDLLIRTG 188
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
G+ RLS+FLLWQ AY+E F WP+F+ + HA ++ R+RRFG S++
Sbjct: 189 GDYRLSNFLLWQAAYAELYFTDTLWPEFTIKELDHAFRVFSGRERRFGKTSEQ 241
>gi|311741368|ref|ZP_07715192.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
pseudogenitalium ATCC 33035]
gi|311303538|gb|EFQ79617.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
pseudogenitalium ATCC 33035]
Length = 251
Score = 267 bits (684), Expect = 7e-70, Method: Composition-based stats.
Identities = 87/232 (37%), Positives = 135/232 (58%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI ++MDGNGRWA +G+ R GHR+G V ++V A G+ L+ +AFS NWR
Sbjct: 20 MPRHIALVMDGNGRWAQEKGMKRTEGHRRGEAVLLDVVDACLAAGVPYLSAYAFSTENWR 79
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ L+ + L++ L + ++V G R L ++ L+ A++ T+ NT
Sbjct: 80 RSPEEVRFLMGFNRDVLRRQREWLNERGVRVVWAGRRPRLWRSVIKELEAAQELTKDNTK 139
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ L + NY R E+ ++I + + +G + D+ IA++L D+PD DL +R
Sbjct: 140 MTLAMCVNYGGRAELVDGFRDIAKQVAAGELNPRDIKEETIAQHLYDPDMPDVDLFLRPS 199
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
GEKR S+FLLWQ AY+E ++ + +PDF+ E F A+ +Y RDRRFGG+ K
Sbjct: 200 GEKRTSNFLLWQSAYAEMIYQDKLFPDFTPEDLFAAIEEYARRDRRFGGVKK 251
>gi|15605177|ref|NP_219963.1| undecaprenyl pyrophosphate synthase [Chlamydia trachomatis
D/UW-3/CX]
gi|76789186|ref|YP_328272.1| undecaprenyl pyrophosphate synthetase [Chlamydia trachomatis
A/HAR-13]
gi|166154664|ref|YP_001654782.1| undecaprenyl pyrophosphate synthetase [Chlamydia trachomatis
434/Bu]
gi|166155539|ref|YP_001653794.1| undecaprenyl pyrophosphate synthetase [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|237802878|ref|YP_002888072.1| undecaprenyl pyrophosphate synthase [Chlamydia trachomatis
B/Jali20/OT]
gi|237804800|ref|YP_002888954.1| undecaprenyl pyrophosphate synthase [Chlamydia trachomatis
B/TZ1A828/OT]
gi|255311261|ref|ZP_05353831.1| undecaprenyl pyrophosphate synthetase [Chlamydia trachomatis 6276]
gi|255317563|ref|ZP_05358809.1| undecaprenyl pyrophosphate synthetase [Chlamydia trachomatis 6276s]
gi|255348822|ref|ZP_05380829.1| undecaprenyl pyrophosphate synthetase [Chlamydia trachomatis 70]
gi|255503362|ref|ZP_05381752.1| undecaprenyl pyrophosphate synthetase [Chlamydia trachomatis 70s]
gi|255507040|ref|ZP_05382679.1| undecaprenyl pyrophosphate synthetase [Chlamydia trachomatis
D(s)2923]
gi|301335933|ref|ZP_07224177.1| undecaprenyl pyrophosphate synthase [Chlamydia trachomatis L2tet1]
gi|6647881|sp|O84456|UPPS_CHLTR RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|3328883|gb|AAC68050.1| YaeS family [Chlamydia trachomatis D/UW-3/CX]
gi|76167716|gb|AAX50724.1| undecaprenyl pyrophosphate synthetase [Chlamydia trachomatis
A/HAR-13]
gi|165930652|emb|CAP04149.1| undecaprenyl pyrophosphate synthetase [Chlamydia trachomatis
434/Bu]
gi|165931527|emb|CAP07103.1| undecaprenyl pyrophosphate synthetase [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|231273100|emb|CAX10013.1| undecaprenyl pyrophosphate synthetase [Chlamydia trachomatis
B/TZ1A828/OT]
gi|231274112|emb|CAX10906.1| undecaprenyl pyrophosphate synthetase [Chlamydia trachomatis
B/Jali20/OT]
gi|289525495|emb|CBJ14972.1| undecaprenyl pyrophosphate synthetase [Chlamydia trachomatis
Sweden2]
gi|296435050|gb|ADH17228.1| undecaprenyl pyrophosphate synthase [Chlamydia trachomatis E/150]
gi|296435977|gb|ADH18151.1| undecaprenyl pyrophosphate synthase [Chlamydia trachomatis G/9768]
gi|296436904|gb|ADH19074.1| undecaprenyl pyrophosphate synthase [Chlamydia trachomatis G/11222]
gi|296437838|gb|ADH19999.1| undecaprenyl pyrophosphate synthase [Chlamydia trachomatis G/11074]
gi|296438770|gb|ADH20923.1| undecaprenyl pyrophosphate synthase [Chlamydia trachomatis E/11023]
gi|297140338|gb|ADH97096.1| undecaprenyl pyrophosphate synthase [Chlamydia trachomatis G/9301]
gi|297748581|gb|ADI51127.1| Undecaprenyl pyrophosphate synthetase [Chlamydia trachomatis D-EC]
gi|297749461|gb|ADI52139.1| Undecaprenyl pyrophosphate synthetase [Chlamydia trachomatis D-LC]
Length = 253
Score = 267 bits (684), Expect = 7e-70, Method: Composition-based stats.
Identities = 95/235 (40%), Positives = 134/235 (57%), Gaps = 4/235 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARG----LPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+S P HI IIMDGN RW +GHR+G + +IV A +G++ LT+FAF
Sbjct: 19 NSLPRHIAIIMDGNRRWQRKHEQFCQKRAISGHRQGADSIPQIVDTALHLGVEALTLFAF 78
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S N+ R SE++EL L S L+ L I++R IG+ L ++ +++A
Sbjct: 79 STENFSRSKSEVAELFSLFNSQLRSKLSFLHDREIRLRCIGDLSKLPQELQNNIEQASSA 138
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T + + L A NY S+DE+ RA K + QD+ S + +D+ LI+ YLDTS +PDPD
Sbjct: 139 TAHYSRMELIFAINYGSKDELVRAFKELHQDLASKKISVNDISEELISSYLDTSGLPDPD 198
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L+IRTGGE R+S+FLLWQ+AY+E WPDF+ A+ Y R RR G
Sbjct: 199 LLIRTGGEMRVSNFLLWQIAYTELYVTDVLWPDFTANDLLEAIKTYQQRSRRGGK 253
>gi|108760968|ref|YP_630774.1| undecaprenyl diphosphate synthase [Myxococcus xanthus DK 1622]
gi|108464848|gb|ABF90033.1| undecaprenyl diphosphate synthase [Myxococcus xanthus DK 1622]
Length = 263
Score = 267 bits (684), Expect = 8e-70, Method: Composition-based stats.
Identities = 90/242 (37%), Positives = 142/242 (58%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ ++ + P H+GIIMDGNGRWA +RGLPR GHR+ E+ A +GI+ LT+
Sbjct: 10 LEQAVKARPMPRHVGIIMDGNGRWAESRGLPRLEGHREATSSVREVTRTARRLGIQALTL 69
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP E++ L+ L++ +L++ + N I++ IG+ L + L
Sbjct: 70 YAFSSQNWARPAEEVAGLMDLLREYLERERSEILDNGIRLNAIGDVDRLPRYVRDPLDRL 129
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ NTG+ L +A +Y R+EI A + + + +E G + + ++ S ++L T +P
Sbjct: 130 RADSAHNTGMVLSLALSYGGREEILHAARRLAEAVERGELAAGRLEESDFEQFLWTQGLP 189
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL++RT GE R+S+FLLWQ+AY+E F WPDF + F ++QY R+RRFG S
Sbjct: 190 PLDLMVRTSGELRVSNFLLWQMAYAEMCFTDALWPDFRTDEFLRCVSQYQQRERRFGLTS 249
Query: 241 KK 242
+
Sbjct: 250 AQ 251
>gi|21672511|ref|NP_660578.1| undecaprenyl pyrophosphate synthetase [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
gi|25009546|sp|Q8K9S6|UPPS_BUCAP RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|21623132|gb|AAM67789.1| undecaprenyl pyrophosphate synthetase [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
Length = 249
Score = 267 bits (684), Expect = 8e-70, Method: Composition-based stats.
Identities = 104/229 (45%), Positives = 145/229 (63%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
HI IIMDGNGRWA RG R GH++G + +I+ A E IK LT++ FS NWRRP
Sbjct: 19 RHIAIIMDGNGRWAEKRGKIRTLGHKEGFKTARKIIKYAVENNIKILTLYVFSRENWRRP 78
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
EI+ L+KL LK +L K NI++++IG+ ++++ + + E QT NTGL
Sbjct: 79 KLEITALMKLFFFALKSEIKNLNKYNIRLKIIGDTSPFNENLKNYIHKVEKQTFNNTGLI 138
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L IA NYS R +I R IK I +D++ + + ++YL TS++ DL+IRTGGE
Sbjct: 139 LNIAANYSGRWDIIRGIKKIIKDVQKDVLDIDQIQERNFSQYLSTSELLPVDLVIRTGGE 198
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
KR+S+FLLWQ+AYSE F WPDF+ F HA++ + R+RRFGG+S
Sbjct: 199 KRISNFLLWQIAYSELYFTDILWPDFNWRDFQHAIDYFFTRERRFGGIS 247
>gi|322518390|sp|C1K5M2|NDPS_SOLLC RecName: Full=Dimethylallylcistransferase, chloroplastic; AltName:
Full=Neryl-diphosphate synthase; Flags: Precursor
gi|226439923|gb|ACO56895.1| neryl diphosphate synthase 1 [Solanum lycopersicum]
Length = 303
Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats.
Identities = 85/236 (36%), Positives = 135/236 (57%), Gaps = 5/236 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P HI +IMDGN RWA +GL GH+ I EI ++++GI+ +T FAFS
Sbjct: 72 LDEELMPKHIALIMDGNRRWAKDKGLEVYEGHKHIIPKLKEICDISSKLGIQIITAFAFS 131
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+R E+ L++ ++ + ++ ++V +IG + L + + E+ T
Sbjct: 132 TENWKRSKEEVDFLLQ----MFEEIYDEFSRSGVRVSIIGCKSDLPMTLQKCIALTEETT 187
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ N GL+L IA NY +I +A K+I +G + D++ +L + L++ P+PDL
Sbjct: 188 KGNKGLHLVIALNYGGYYDILQATKSIVNKAMNGLLDVEDINKNLFDQELESK-CPNPDL 246
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
+IRTGGE+R+S+FLLWQ+AY+EF F +PDF E A+ + R RRFGG +
Sbjct: 247 LIRTGGEQRVSNFLLWQLAYTEFYFTNTLFPDFGEEDLKEAIMNFQQRHRRFGGHT 302
>gi|269794675|ref|YP_003314130.1| Undecaprenyl pyrophosphate synthetase [Sanguibacter keddieii DSM
10542]
gi|269096860|gb|ACZ21296.1| Undecaprenyl pyrophosphate synthetase [Sanguibacter keddieii DSM
10542]
Length = 279
Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats.
Identities = 89/235 (37%), Positives = 143/235 (60%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ P H+ ++MDGNGRWA ARGLPR AGH G ++VA A ++G+++++ +AF
Sbjct: 29 AIPREFVPQHVAVVMDGNGRWANARGLPRTAGHEAGEAALLDVVAGAIDIGVQHVSAYAF 88
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + L++ +L ++VR G R L ++ L+ AE+
Sbjct: 89 STENWKRSPEEVRFLMGFNRDVLRRQRDTLNSWGVRVRWAGRRPRLWRSVISELEVAEEL 148
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
TR NT L + NY R EI+ A + I +++ +G + + +A+YLD D+PD D
Sbjct: 149 TRENTVCTLTMCVNYGGRAEIADAAQAIGREVAAGRLDPSKITEKTVARYLDEPDLPDVD 208
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R+ GE+R+S+F++WQ AY+E VF+ + WPD R + A+ +Y RDRR+GG
Sbjct: 209 LFLRSSGEQRISNFMIWQSAYAELVFMNQLWPDVDRRTLWRAVEEYARRDRRYGG 263
>gi|147833024|emb|CAN61894.1| hypothetical protein VITISV_028791 [Vitis vinifera]
Length = 592
Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats.
Identities = 90/235 (38%), Positives = 142/235 (60%), Gaps = 2/235 (0%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P+H+ +IMDGN RWA RGLP +GH+ G+ E+V + GIK L++FAFS
Sbjct: 80 LRRELMPEHVAVIMDGNVRWAQKRGLPAASGHQAGVRSLRELVGLCCKWGIKVLSVFAFS 139
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
+NW R E+ L+ LI+ +K + + I+V VIG+ L + + ++ + E+ T
Sbjct: 140 YDNWSRSEGEVGFLMSLIERVVKAELPNFGREGIRVSVIGDLSKLPEQLQKLIIDVEETT 199
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS--DVPDP 182
+ N+ L +A +YS + +I +A KNI ++ G + D++ SLI + L T+ + P P
Sbjct: 200 KENSRLQFIVALSYSGQCDILQACKNIGXKVKDGLIEPEDINKSLIEQELQTNCTEFPFP 259
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRT GE R+S+F+LWQ+AY+E F WPDF ++ F AL+ + R RR+G
Sbjct: 260 DLLIRTSGELRVSNFMLWQIAYTELCFFSTLWPDFGKDEFVEALSSFQKRQRRYG 314
>gi|15237748|ref|NP_200685.1| dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase,
putative [Arabidopsis thaliana]
gi|85541788|sp|Q56Y11|DDPS2_ARATH RecName: Full=Dehydrodolichyl diphosphate synthase 2;
Short=Dedol-PP synthase 2
gi|8843797|dbj|BAA97345.1| unnamed protein product [Arabidopsis thaliana]
gi|208879536|gb|ACI31313.1| At5g58770 [Arabidopsis thaliana]
gi|332009713|gb|AED97096.1| dehydrodolichyl diphosphate synthase 2 [Arabidopsis thaliana]
Length = 310
Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats.
Identities = 104/231 (45%), Positives = 143/231 (61%), Gaps = 2/231 (0%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IIMDGNGRWA RGL GHR G+E EIV + GI+ LT+FAFS +NW
Sbjct: 77 MPKHVAIIMDGNGRWAKNRGLQPWDGHRAGVEALKEIVELCGKWGIQVLTVFAFSTDNWI 136
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP EI L L + LK F +L KNN+++ +IG+ L +L V+ E E+ T+ NT
Sbjct: 137 RPRIEIDFLFSLFERSLKTEFQNLAKNNVRISIIGDSSKLPKSLLRVINEVEEVTKNNTR 196
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS--DVPDPDLIIR 187
L L +A YS + ++ +A + I + ++ G + ++D LI + L+T+ + P PDL+IR
Sbjct: 197 LQLIVAVGYSGKYDVLQACRGIARRVKDGEIEVEEIDERLIEEELETNCTEFPYPDLLIR 256
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
T GE R+S+FLLWQ+AY+E F E WPDF R F AL + R RRFGG
Sbjct: 257 TSGELRVSNFLLWQLAYTELFFAQELWPDFGRSGFIEALMSFQQRQRRFGG 307
>gi|331698244|ref|YP_004334483.1| Undecaprenyl pyrophosphate synthase [Pseudonocardia dioxanivorans
CB1190]
gi|326952933|gb|AEA26630.1| Undecaprenyl pyrophosphate synthase [Pseudonocardia dioxanivorans
CB1190]
Length = 261
Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats.
Identities = 91/235 (38%), Positives = 139/235 (59%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ P+H+ ++MDGNGRWA ARGLPR GHR+G ++ ++G+K L+ +AF
Sbjct: 17 AIPPELVPNHVALVMDGNGRWANARGLPRIEGHRRGEASLMDVARGCIDIGVKWLSAYAF 76
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + +++ + ++VR G R L ++ L+ AE++
Sbjct: 77 STENWKRSPDEVRFLMGFNRDVIRRRVDEMHAMGVRVRWAGRRPRLWRSVIRELEVAEEK 136
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
TR N L L + NY R EI+ A++ I + + G + +D IA+YLD D+PD D
Sbjct: 137 TRHNDVLTLTMCVNYGGRAEIADAVRQIARLVAEGRLKPDKIDERTIARYLDEPDMPDVD 196
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R+ GE+R S+FLLWQ AY+E VF+ +PDF R + A+ Y RDRRFGG
Sbjct: 197 LFVRSSGEQRTSNFLLWQSAYAEMVFLDTLFPDFDRRHIWEAIEIYARRDRRFGG 251
>gi|194365039|ref|YP_002027649.1| undecaprenyl pyrophosphate synthase [Stenotrophomonas maltophilia
R551-3]
gi|194347843|gb|ACF50966.1| undecaprenyl diphosphate synthase [Stenotrophomonas maltophilia
R551-3]
Length = 255
Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats.
Identities = 97/231 (41%), Positives = 134/231 (58%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
HI IIMDGNGRWA R PR GHR G N + E+GI LT+FAFS NW RP
Sbjct: 14 RHIAIIMDGNGRWAQQRRRPRVIGHRAGARAVNRTIERCLELGIPALTLFAFSSENWGRP 73
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E+ L+KL L + L + ++VR IG R ++ ++ AE +T NT L
Sbjct: 74 QEEVDALMKLFLGALDREVDELHRRGVRVRFIGERERFGAGLVSRMQLAEQRTADNTTLT 133
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L IA +Y R +I+RA + + ++ +G + +D SL+ + + +D+P PDL IRTGG+
Sbjct: 134 LSIAASYGGRQDIARAARELAAEVAAGRLLPEQIDESLLGRQVALADLPPPDLFIRTGGD 193
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
R+S+FLLWQ+AY+E F WPDF L AL+ Y R+RRFG S +
Sbjct: 194 TRISNFLLWQLAYTELWFTEALWPDFDAALLQQALDAYGSRERRFGLTSAQ 244
>gi|298529657|ref|ZP_07017060.1| undecaprenyl diphosphate synthase [Desulfonatronospira
thiodismutans ASO3-1]
gi|298511093|gb|EFI34996.1| undecaprenyl diphosphate synthase [Desulfonatronospira
thiodismutans ASO3-1]
Length = 233
Score = 267 bits (683), Expect = 9e-70, Method: Composition-based stats.
Identities = 97/235 (41%), Positives = 135/235 (57%), Gaps = 4/235 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M + P HI IIMDGNGRWA GLPR GH++G IV + +GI++LT++AFS
Sbjct: 1 MQETLPRHIAIIMDGNGRWAGRHGLPRVEGHKQGTRSARAIVEESRRLGIQHLTLYAFSR 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+ L L+ FL +L + +I++ ++G L +L+ A ++TR
Sbjct: 61 ENWSRPRDEVDFLFNLLGEFLNGELPTLMRQDIRLNILGETGELPLATRKILQMACNRTR 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N + L +A NYS R EI RA + ++ + + +D +YL T+ PDPDL+
Sbjct: 121 SNQSMQLNLALNYSGRLEIQRACR----LMQEKGLDACQMDPREFGQYLYTAGQPDPDLV 176
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IRT GE R+S+FLL+Q AYSEF F WPDF AL Y R+RRFGG+
Sbjct: 177 IRTSGEYRISNFLLYQSAYSEFYFTETLWPDFDSGELHKALEDYRRRNRRFGGVE 231
>gi|121594919|ref|YP_986815.1| undecaprenyl diphosphate synthase [Acidovorax sp. JS42]
gi|120606999|gb|ABM42739.1| undecaprenyl diphosphate synthase [Acidovorax sp. JS42]
Length = 244
Score = 267 bits (683), Expect = 9e-70, Method: Composition-based stats.
Identities = 89/237 (37%), Positives = 130/237 (54%), Gaps = 7/237 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ + P HI I+MDGNGRWA R LPR AGHR+G+E V A + G+ LT+FAFS
Sbjct: 4 VQGAIPHHIAIVMDGNGRWATRRFLPRLAGHRQGVESLRRCVHACVQRGVGVLTVFAFSS 63
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+S L+ L+ L + L ++ ++V +G + + + L+ AE T
Sbjct: 64 ENWNRPADEVSGLMDLLAKALTREVPQLARDGLQVHFVGEKSGISAQVREGLQRAEAATA 123
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N L L + FNY R +I++ + + + + + + + VPDPDL+
Sbjct: 124 SNQRLVLNVCFNYGGRWDITQ-------AAAALAARGEPITEASLHAAMGMAHVPDPDLL 176
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTGGE+R+S+FLLWQ AY+E F WPDF A+ + R+RRFG S +
Sbjct: 177 IRTGGERRISNFLLWQAAYTELYFSDRLWPDFDEAALDEAIADFAARERRFGQTSDQ 233
>gi|218961844|ref|YP_001741619.1| Undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans,poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS) [Candidatus
Cloacamonas acidaminovorans]
gi|167730501|emb|CAO81413.1| Undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans,poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS) [Candidatus
Cloacamonas acidaminovorans]
Length = 246
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 97/241 (40%), Positives = 130/241 (53%), Gaps = 3/241 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + + P HIG IMDGNGRWA R P GHR G++ ++V E+ ++ LT
Sbjct: 9 LLNELDRNKLPVHIGFIMDGNGRWAKKRNRPHLYGHRAGVKALRQVVELGVELKLQYLTF 68
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP SE+ L++L+K LKK L + NI + IG + L+++ +
Sbjct: 69 YAFSTENWSRPESEVKGLLRLLKDQLKKEIPELMEQNIYAQFIGTTVGLEENYWKEVSSL 128
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
QT NTG+ + AFNY R EI K H + YL T+ P
Sbjct: 129 VAQTHNNTGMVVNFAFNYGGRLEIIEGFKKFMTMHPEEW---HKLTPEEFGNYLWTAGQP 185
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDLIIRT GEKRLS+FLLWQ AY+E WPDF + AL Y R+RRFGG +
Sbjct: 186 DPDLIIRTSGEKRLSNFLLWQSAYAELYITDTLWPDFDKVELIKALLDYTSRERRFGGRN 245
Query: 241 K 241
+
Sbjct: 246 E 246
>gi|21230826|ref|NP_636743.1| undecaprenyl pyrophosphate synthetase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66769175|ref|YP_243937.1| undecaprenyl pyrophosphate synthase [Xanthomonas campestris pv.
campestris str. 8004]
gi|42559995|sp|Q8PAV7|UPPS_XANCP RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|21112429|gb|AAM40667.1| undecaprenyl pyrophosphate synthetase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66574507|gb|AAY49917.1| undecaprenyl pyrophosphate synthetase [Xanthomonas campestris pv.
campestris str. 8004]
Length = 258
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 94/242 (38%), Positives = 138/242 (57%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + +++ P H+ IIMDGNGRWA R PR GHR G N + + G+ LT+
Sbjct: 6 MHSEPSAAAVPRHLAIIMDGNGRWAQRRRRPRVIGHRAGARAVNRTIDFCLDKGVSALTL 65
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW RP E+ L+KL L +G L++ ++VR IG+R + + A
Sbjct: 66 FAFSSENWGRPQDEVDALMKLFLHALDRGVEELQRRGVQVRFIGDRSRFTAPLRDRMAGA 125
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E T NT L L IA +Y R +I+ A + + ++ +G + +D +L+A + +D+P
Sbjct: 126 ERITAANTRLVLSIAASYGGRQDIAMAARALAVEVAAGRLQPEQIDEALLASRVALADLP 185
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
PDL IRTGG+ R+S+FLLWQ+AY+E F WP+F + AL+ Y R+RRFG S
Sbjct: 186 APDLFIRTGGDTRISNFLLWQLAYTELWFTETLWPEFDAGVLQQALDDYAGRERRFGLTS 245
Query: 241 KK 242
+
Sbjct: 246 AQ 247
>gi|313673947|ref|YP_004052058.1| undecaprenyl pyrophosphate synthetase [Calditerrivibrio
nitroreducens DSM 19672]
gi|312940703|gb|ADR19895.1| Undecaprenyl pyrophosphate synthetase [Calditerrivibrio
nitroreducens DSM 19672]
Length = 243
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 98/234 (41%), Positives = 139/234 (59%), Gaps = 1/234 (0%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+GIIMDGNGRWA R LPR GHR+G++ IV AA +GIK L++FAFS NW
Sbjct: 7 KIPLHVGIIMDGNGRWAKKRLLPRVMGHREGVKTVKRIVEHAANMGIKYLSLFAFSTENW 66
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+S L+ L+ +L ++ + I +RV G+ L + L + + ++ N
Sbjct: 67 FRPEEEVSTLMGLLDEYLDSEMRNIVEKGISLRVSGDISKLREATKTKLMDIIEASKNNR 126
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+ L +A NY RDE+ +A ++ +D SG + ++ L YL DVPD DL+IRT
Sbjct: 127 RMVLNLALNYGGRDELLKAASDLARDFASGKIAESELGL-LFKNYLYNPDVPDIDLLIRT 185
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE R+S+F+LW++AYSE F WPDFS + F A+ YN R RRFG ++
Sbjct: 186 SGEIRISNFMLWRLAYSELYFTKVLWPDFSEKDFDEAIEDYNRRIRRFGKTDEQ 239
>gi|325677061|ref|ZP_08156731.1| di-trans,poly-cis-decaprenylcistransferase [Rhodococcus equi ATCC
33707]
gi|325552132|gb|EGD21824.1| di-trans,poly-cis-decaprenylcistransferase [Rhodococcus equi ATCC
33707]
Length = 267
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 91/238 (38%), Positives = 140/238 (58%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P+H+ ++MDGNGRWA RGLPR AGH +G +V + VA E+G+K L+ +AFS
Sbjct: 30 LQPELIPNHVALVMDGNGRWAQDRGLPRTAGHERGEDVLMDTVAGCIEIGVKWLSAYAFS 89
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+R E+ L+ + +++ + + ++VR G R L ++ L+ AE+ T
Sbjct: 90 TENWKRSPEEVKFLMGFNRDVIRRRRDEMHEMGVRVRWAGRRPRLWRSVIKELEIAEELT 149
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NT + L + NY R EI+ A + I + +G + + + AKYLD D+PD DL
Sbjct: 150 KDNTVMTLTMCVNYGGRAEIADAAREIARRAAAGEIDPEKISEATFAKYLDEPDMPDVDL 209
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+R GE+R S+FL+WQ AY+E VF + +PDF R + A +Y RDRRFGG+ +
Sbjct: 210 FLRPSGEQRTSNFLIWQAAYAELVFQEKLFPDFDRRDLWAACVEYASRDRRFGGVKYQ 267
>gi|153006544|ref|YP_001380869.1| undecaprenyl diphosphate synthase [Anaeromyxobacter sp. Fw109-5]
gi|152030117|gb|ABS27885.1| undecaprenyl diphosphate synthase [Anaeromyxobacter sp. Fw109-5]
Length = 255
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 85/242 (35%), Positives = 129/242 (53%), Gaps = 6/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + + P H+ IIMDGNGRWA ARGLPR GHR+G E + A +G++ LT+
Sbjct: 15 LESRVKARPVPRHVAIIMDGNGRWAEARGLPRVLGHREGSEAVRAVTRTARRIGVQALTL 74
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP E+ L+ L+ FL+ + +N I++ IG+ L D + L
Sbjct: 75 YAFSSENWARPDEEVGALMSLLAEFLESERAEMMRNGIRLNAIGDLERLPDVVREKLASV 134
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+T NT + L +A +Y R +I +A + + + L T+ +P
Sbjct: 135 RAETTGNTAMTLTLALSYGGRQDIVQAARRAAAEKGPAFEAED------LEAALWTAGLP 188
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
+ DL++RT GE+R+S+FLLWQ AY+E F WPDF A+ + R+RRFG
Sbjct: 189 ELDLLVRTSGERRISNFLLWQCAYAELHFSEVLWPDFRERELLLAIRDFQGRERRFGMTG 248
Query: 241 KK 242
+
Sbjct: 249 AQ 250
>gi|269127438|ref|YP_003300808.1| undecaprenyl diphosphate synthase [Thermomonospora curvata DSM
43183]
gi|268312396|gb|ACY98770.1| undecaprenyl diphosphate synthase [Thermomonospora curvata DSM
43183]
Length = 264
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 92/235 (39%), Positives = 132/235 (56%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ P H+ I+MDGNGRWA RGLPR GH+ G +++ A E+GI L+ +AF
Sbjct: 19 AIPKELVPRHVAIVMDGNGRWAKQRGLPRTEGHKMGEHSLFDVIMGAIELGIPYLSAYAF 78
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + +++ L ++VR G R L ++ L+EAE
Sbjct: 79 STENWKRSPEEVRFLMGFNRDVIRRRRDQLHSMGVRVRWAGRRPRLWRSVIKELEEAERL 138
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T N L L NY R EI+ A I +D+ +G + ++ + A+YL +VP+ D
Sbjct: 139 TADNDVLTLQFCVNYGGRAEITDAAAAIARDVAAGKLNPDKINEKVFARYLYRPEVPEVD 198
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R GE+RLS+FLLWQ AY+EFVF WPDF R + A Y RDRR+GG
Sbjct: 199 LFLRPSGEQRLSNFLLWQSAYAEFVFQDVLWPDFDRRHLWQACEIYATRDRRYGG 253
>gi|139439764|ref|ZP_01773155.1| Hypothetical protein COLAER_02186 [Collinsella aerofaciens ATCC
25986]
gi|133774914|gb|EBA38734.1| Hypothetical protein COLAER_02186 [Collinsella aerofaciens ATCC
25986]
Length = 228
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 96/224 (42%), Positives = 134/224 (59%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA +RGL R GH+ GI EI+ A +G+ L+ +AFS NW RP E++
Sbjct: 1 MDGNGRWATSRGLARTEGHKAGIVSLREIITACVRLGVDVLSAYAFSTENWNRPQHEVNV 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ L LK+ N++V +G+ +L V + + +TG+ L +A N
Sbjct: 61 LMHLFAKTFIDELPLLKRENVRVVFLGDISALPKKTRDVFERGLAECADHTGMTLALAVN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y +R EI+RA++ I D +G + +D ++A +L T+ +PDP+L+IRT GE RLS++
Sbjct: 121 YGARAEITRAVRQIALDAAAGKIDPGAIDDDMVASHLYTAGLPDPELVIRTSGELRLSNY 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
LLWQVAYSEF YWPDF R A+ Y RDRRFGGLSK
Sbjct: 181 LLWQVAYSEFYVTDTYWPDFDRWGLVDAILAYQGRDRRFGGLSK 224
>gi|226360359|ref|YP_002778137.1| undecaprenyl pyrophosphate synthase [Rhodococcus opacus B4]
gi|226238844|dbj|BAH49192.1| undecaprenyl pyrophosphate synthase [Rhodococcus opacus B4]
Length = 269
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 89/236 (37%), Positives = 139/236 (58%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P HI ++MDGNGRWA RGLPR AGH +G V + V E+G++ L+ +AFS
Sbjct: 34 LQPELVPRHIALVMDGNGRWAQERGLPRTAGHERGEAVLMDAVCGCIEMGVEWLSAYAFS 93
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+R E+ L+ + +++ + + ++VR G R L ++ L+ AE+ T
Sbjct: 94 TENWKRSPEEVRFLMGFNRDVIRRRRDEMHEMGVRVRWAGRRPKLWRSVIKELEIAEELT 153
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NT +NL + NY R EI+ A K I + + +G + + + +A++LD D+PD DL
Sbjct: 154 KHNTVMNLTMCVNYGGRAEIADAAKEIGRRVAAGQLDPEKITEATVARFLDEPDMPDVDL 213
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
+R GE+R S+FL+WQ AY+E V+ + +PDF R + A +Y RDRRFGG+
Sbjct: 214 FLRPSGEQRTSNFLIWQSAYAEMVYQEKLFPDFDRRDLWAACVEYASRDRRFGGVK 269
>gi|308234871|ref|ZP_07665608.1| undecaprenyl pyrophosphate synthase [Gardnerella vaginalis ATCC
14018]
gi|311114392|ref|YP_003985613.1| Di-trans,poly-cis-decaprenylcistransferase [Gardnerella vaginalis
ATCC 14019]
gi|310945886|gb|ADP38590.1| Di-trans,poly-cis-decaprenylcistransferase [Gardnerella vaginalis
ATCC 14019]
Length = 264
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 85/234 (36%), Positives = 141/234 (60%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
P H+G+IMDGNGRWA RG+ R GH+ V + +A A E G++ L+++ FS
Sbjct: 29 KGKVPRHVGVIMDGNGRWAKERGMIRTEGHKAAEPVVFDTIAGAIEAGVRYLSLYTFSTE 88
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW+R E+ L+ + + + + + ++VR G R L ++ L++A++ T+
Sbjct: 89 NWKRSPQEVHFLMGFSRDIIHRRVAQMNEWGVRVRWAGRRPKLWKSVIDELEKAQEITKN 148
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NT +++ NY R EI+ A I ++++SG + + +IA++L D+PD DL+I
Sbjct: 149 NTTIDVVFCLNYGGRAEIADACAAIAREVKSGKIKGDRISEKMIAEHLYNPDIPDCDLVI 208
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RT GE+R S+FL WQ +Y+E F+PE +PD+ RE + ++++Y RDRRFGG+
Sbjct: 209 RTSGEQRTSNFLPWQASYAELDFVPELFPDYGREALWRSIDRYAHRDRRFGGVK 262
>gi|157364645|ref|YP_001471412.1| undecaprenyl diphosphate synthase [Thermotoga lettingae TMO]
gi|157315249|gb|ABV34348.1| undecaprenyl diphosphate synthase [Thermotoga lettingae TMO]
Length = 224
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 90/227 (39%), Positives = 130/227 (57%), Gaps = 6/227 (2%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IMDGNGRWA +GLPR GHR+G + ++V AE+GIK +T++ FS NW+RP
Sbjct: 4 HLAFIMDGNGRWAQKKGLPRAEGHRRGAQKAEKVVEWCAELGIKYVTLYTFSTENWKRPK 63
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
EI+ L L+ + +K+ F + K +++R G L I + +E E++T+ N + +
Sbjct: 64 EEINYLFLLLVNTIKRKFNHMMKQGVRLRFCGVIDELPKQIADICREFEEKTKHNDKIQV 123
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A NY R E+ A + + ++L DVPDPD +IRT GE
Sbjct: 124 ILALNYGGRRELIDAFNRAIKAGVKS------LSEDDFKQFLYLPDVPDPDFVIRTSGEI 177
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
R+S+FLLWQ AYSE F WPDF+R AL+ +N R R+FGGL
Sbjct: 178 RISNFLLWQTAYSELYFTKTLWPDFARSDLLRALDDFNKRHRKFGGL 224
>gi|319760413|ref|YP_004124351.1| undecaprenyl pyrophosphate synthase [Candidatus Blochmannia vafer
str. BVAF]
gi|318039127|gb|ADV33677.1| undecaprenyl pyrophosphate synthase [Candidatus Blochmannia vafer
str. BVAF]
Length = 250
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 96/229 (41%), Positives = 137/229 (59%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IIMDGNGRWA RG R GH+ G + + V A LT++AFS NW+
Sbjct: 18 LPKHVAIIMDGNGRWARIRGRLRIIGHQAGFQAARQAVRFAVNYQFDALTLYAFSSENWK 77
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP SEI L++L L Y+L KNNIK+++IG+ + + + AE T N G
Sbjct: 78 RPDSEIDSLMQLFAYALDNEIYNLHKNNIKLKIIGDISRFNKALQNSIFNAERLTADNDG 137
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
LNL IA NY R +I + +K I ++ G + + ++ L+ +Y+ +D+ DL+IRTG
Sbjct: 138 LNLNIAVNYGGRWDILQGVKKIAVQVKKGILDPNLINEDLLCQYICMNDMVPVDLVIRTG 197
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GE+R+S+FLLWQ+AY+E F WPDF+ +F AL+ + RDRRFG
Sbjct: 198 GERRISNFLLWQIAYAELFFTDILWPDFNDVVFKSALHAFMQRDRRFGK 246
>gi|119716164|ref|YP_923129.1| undecaprenyl pyrophosphate synthetase [Nocardioides sp. JS614]
gi|119536825|gb|ABL81442.1| Undecaprenyl pyrophosphate synthetase [Nocardioides sp. JS614]
Length = 271
Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats.
Identities = 87/235 (37%), Positives = 135/235 (57%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ P H+ I+MDGNGRWA RGLPR GH +G ++V A E+G+K ++ +AF
Sbjct: 15 AIPRELVPRHVAIVMDGNGRWAKERGLPRTKGHERGEHSLFDVVEGAIEIGVKAISAYAF 74
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW R E+ L+ + +++ + + ++VR G L ++ L+ AE+
Sbjct: 75 STENWSRSPDEVRFLMGFNRDVIRRRRDEMHELGVRVRWAGRAPRLWKSVIRELQVAEEL 134
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
TR N L L + NY R E++ ++I +++ +G + VD + A++L ++ D D
Sbjct: 135 TRRNDVLTLTMCVNYGGRAELADTARSIAREVAAGRLDPEKVDEKVFARHLYVPELADAD 194
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L+ RT GE+RLS+F+LWQ AYSE VF WPD R +HA+ Y RDRR+GG
Sbjct: 195 LVWRTSGEQRLSNFMLWQAAYSELVFTDVLWPDVDRRHLWHAIELYASRDRRYGG 249
>gi|150399407|ref|YP_001323174.1| undecaprenyl diphosphate synthase [Methanococcus vannielii SB]
gi|150012110|gb|ABR54562.1| undecaprenyl diphosphate synthase [Methanococcus vannielii SB]
Length = 264
Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats.
Identities = 85/240 (35%), Positives = 132/240 (55%), Gaps = 4/240 (1%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A ++ P H+GIIMDGN R A G GH G E++ +GI +T++A
Sbjct: 25 ARVIKHPLPKHVGIIMDGNRRLAKKIGENPEIGHHLGASKVREVINWCVSLGIHTVTLYA 84
Query: 63 FSINNWRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FS+ N+ RP E++ L+ L + + + KN I+V VIG + L + + A
Sbjct: 85 FSLENFERPKDEVNVLMNLFEREFLEIAKHPDIHKNKIQVNVIGRKKLLPKHVQDAINYA 144
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV- 179
E+QT+ + + A Y + EI ++K I + ++ GS+ +++ LI++ L TS +
Sbjct: 145 EEQTKFYSDYYVNFAIAYGGQQEIVDSVKKIAKKVKDGSLSIEEINLELISENLYTSHLP 204
Query: 180 -PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
P+PDLIIRT GE+R+S+FL WQ YSE F YWP F R F ++ +Y R+RR+G
Sbjct: 205 CPNPDLIIRTSGEERISNFLTWQSCYSELYFCETYWPTFRRVDFLRSIREYQKRERRYGK 264
>gi|144897598|emb|CAM74462.1| Undecaprenyl pyrophosphate synthetase [Magnetospirillum
gryphiswaldense MSR-1]
Length = 220
Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats.
Identities = 101/208 (48%), Positives = 141/208 (67%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
PP H+ IIMDGNGRWA ARGLPR AGH++G E V AA E+G+ LT++AFS NW+
Sbjct: 13 PPVHVAIIMDGNGRWAKARGLPRTAGHKRGAEAVRRTVEAAREMGVSYLTLYAFSSENWK 72
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+++L+ L++ +L+ +L KN I++RVIG+R L DI ++ E+E +T NT
Sbjct: 73 RPTGEVTDLMGLLRLYLRNEVANLHKNGIRLRVIGDRSRLSRDINALIDESEAKTASNTA 132
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L +A +Y R EI+ A + + D+ G + + +D +A L T+D+PDPDL+IRT
Sbjct: 133 LTLVLALSYGGRQEITDAARRLACDVAMGRLDADSIDEDALAARLYTADIPDPDLLIRTS 192
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDF 217
GEKR+S+FLLWQ AY+EFVF WP F
Sbjct: 193 GEKRISNFLLWQSAYAEFVFTDVLWPVF 220
>gi|326773536|ref|ZP_08232819.1| di-trans,poly-cis-decaprenylcistransferase [Actinomyces viscosus
C505]
gi|326636766|gb|EGE37669.1| di-trans,poly-cis-decaprenylcistransferase [Actinomyces viscosus
C505]
Length = 286
Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats.
Identities = 95/238 (39%), Positives = 140/238 (58%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ ++S P H+ ++MDGNGRWA ARGLPR GHR G ++ A A E+G+K L+++AFS
Sbjct: 26 LPAASLPQHVAVVMDGNGRWANARGLPRTEGHRVGEANMLDVAAGAIEIGVKELSVYAFS 85
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRR E+ ++ + L+ L N+++R IG L +L L+EAE T
Sbjct: 86 TENWRRSPGEVRFIMGFARKVLRVQRDVLNSWNVRLRWIGRTPRLWKSVLHELREAERVT 145
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NTGL L + NY R EI+ A + I +D+ +G + + ++ I +YL + + D DL
Sbjct: 146 AHNTGLVLNLCINYGGRAEIADATRAIAEDVAAGRLKASSINEKTIQRYLYSPTMRDVDL 205
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTG E+R S+FL+W +Y+E F P WPDF+R + A Y R+RR+GG K
Sbjct: 206 FIRTGDEQRTSNFLMWSSSYAELYFSPLAWPDFNRTELWKACEAYAGRERRYGGAVDK 263
>gi|302383604|ref|YP_003819427.1| undecaprenyl diphosphate synthase [Brevundimonas subvibrioides ATCC
15264]
gi|302194232|gb|ADL01804.1| undecaprenyl diphosphate synthase [Brevundimonas subvibrioides ATCC
15264]
Length = 251
Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats.
Identities = 97/230 (42%), Positives = 138/230 (60%), Gaps = 1/230 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +IMDGNGRWA ARGLPR GHR+G++ V AA + GI LT+F FS NWRR
Sbjct: 15 PRHVALIMDGNGRWAQARGLPRAMGHREGVQALKRTVQAAPDFGIDCLTVFGFSTENWRR 74
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
PV E+S+L+ L++S++ L + ++VRV+G R L DI +++ AE T N
Sbjct: 75 PVEEVSDLMGLVRSYVSSDLNRLAREGVRVRVLGRRTGLPSDIDAIVERAERTTAHNDKF 134
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +AFNY R +I A + D + +D +++ L T+ P D+I+RT G
Sbjct: 135 LLQVAFNYGGRADIVDAAQAHV-DRVLAGQATGPLDEAMLGAGLSTAGSPPVDVIVRTSG 193
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E+RLS+FLLW+ AY+E V+ WPD+ E + QY RDRRFG ++
Sbjct: 194 EQRLSNFLLWEAAYAELVYQDVLWPDYGPEALADVVRQYQARDRRFGAVT 243
>gi|257126983|ref|YP_003165097.1| undecaprenyl diphosphate synthase [Leptotrichia buccalis C-1013-b]
gi|257050922|gb|ACV40106.1| undecaprenyl diphosphate synthase [Leptotrichia buccalis C-1013-b]
Length = 272
Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats.
Identities = 92/265 (34%), Positives = 138/265 (52%), Gaps = 32/265 (12%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI IIMDGNGRWA RG R GHR G +I+ A +G+K LT++AFS NW+
Sbjct: 8 IPKHIAIIMDGNGRWAKKRGKIRLEGHRAGANSLEKILRHAGNIGVKYLTVYAFSTENWK 67
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E++ L+ L +L + +LKK +K+ V G + ++ + +L ++E E+
Sbjct: 68 RPEKEVNGLMDLFAKYLDREKKTLKKQGVKLLVTGAKENISEKLLKKIEETENYLANCEN 127
Query: 130 LNLFIAFNYSSRDEISRAIKNIF--------------------------------QDIES 157
+ IAFNY R EI A+ + +
Sbjct: 128 IVFNIAFNYGGRREIVDAVNKVLETKLLNETSGVASEQFNNENNGLNVTEKVVNGFVDKE 187
Query: 158 GSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDF 217
++ + + +K++ ++PDP+L+IRT GE R+S+FLLW+VAYSEF YWPDF
Sbjct: 188 ENLENIKITEEEFSKFMYRPEIPDPELVIRTSGEFRISNFLLWEVAYSEFYITDVYWPDF 247
Query: 218 SRELFFHALNQYNLRDRRFGGLSKK 242
+ A+ +N RDRR+GGL+ K
Sbjct: 248 DEKELDKAILSFNKRDRRYGGLNVK 272
>gi|332298056|ref|YP_004439978.1| Undecaprenyl pyrophosphate synthase [Treponema brennaborense DSM
12168]
gi|332181159|gb|AEE16847.1| Undecaprenyl pyrophosphate synthase [Treponema brennaborense DSM
12168]
Length = 234
Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats.
Identities = 105/239 (43%), Positives = 149/239 (62%), Gaps = 5/239 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M A++ + P HIGIIMDGNGRWA R LPR GH++G+E +IVAAAA +G+K +T+
Sbjct: 1 MTAAIDMHTVPAHIGIIMDGNGRWAKKRNLPRTFGHKEGLETAKKIVAAAARIGVKYVTL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW+R E+ L+ LI++ L+ F KKN I++R +G+ L ++I + A
Sbjct: 61 YTFSTENWKRTQEEVGFLMNLIQTHLRGEFEFYKKNGIRIRHLGDVSGLPENISKEILLA 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E T TGL + +A NY RDE+ RA K + + DV + ++ D ++P
Sbjct: 121 ESDTEQFTGLTVVLAINYGGRDELIRAFKKFA-----ETRSAKDVTPEALTEFCDIPELP 175
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
D DLIIRTGGEKRLS+FL+W AY+E VF WPD++ F A+ +Y R+RRFGG+
Sbjct: 176 DADLIIRTGGEKRLSNFLMWHSAYAELVFTDTLWPDYTEREFHDAIAEYRSRNRRFGGI 234
>gi|224060409|ref|XP_002300185.1| predicted protein [Populus trichocarpa]
gi|222847443|gb|EEE84990.1| predicted protein [Populus trichocarpa]
Length = 241
Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats.
Identities = 87/240 (36%), Positives = 137/240 (57%), Gaps = 2/240 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + S P H+ +IMDGN RWA RG+ +GH G+ E + + GIK +T+
Sbjct: 1 LPEGLRRESMPRHVAVIMDGNSRWARQRGMLTPSGHEAGVRSLKEFIRLCLQWGIKVVTV 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFSI+NW RP E+ ++ +I++ LK G + +V +IG+ + + + +
Sbjct: 61 FAFSIDNWTRPKEEVDIVMTMIENLLKSGLDDFIREGTRVSIIGDTSRVPKSLQRTICDI 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS--D 178
E+ TR N+ + +A +YS ++ +A K++ Q ++ G + D++ S + + L+T +
Sbjct: 121 EEMTRENSKFHFIMAISYSGTYDVVQACKSVAQKVKDGVIQVEDINESAVQQELETKCCE 180
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
P PDL+IRT GE R+S+FLLWQ AYSE F WPDF + F AL Y R RR+GG
Sbjct: 181 FPCPDLLIRTSGELRISNFLLWQSAYSELFFAKALWPDFGKADFVEALTSYQHRQRRYGG 240
>gi|119477106|ref|ZP_01617342.1| undecaprenyl diphosphate synthase [marine gamma proteobacterium
HTCC2143]
gi|119449469|gb|EAW30707.1| undecaprenyl diphosphate synthase [marine gamma proteobacterium
HTCC2143]
Length = 269
Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats.
Identities = 94/231 (40%), Positives = 141/231 (61%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+ P H+ IIMDGNGRWA +G GHR G+E ++ A GIK +T+FAFS N
Sbjct: 11 TKVPGHLAIIMDGNGRWAHRQGKSASYGHRAGVEAVRSVLELANGYGIKIVTLFAFSSEN 70
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W+RP +E+ L+ L S+LK+ L + I++R IG+R +L +++AE T N
Sbjct: 71 WQRPGTEVKALMTLFGSYLKREVKQLHADRIRIRFIGDRHRFSAGLLKQMEQAEQLTVNN 130
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L IA +Y + +I+R++K I + ++ G++ ++D +L+ Y+ +D+P PDL IR
Sbjct: 131 RERTLVIAVDYGGQQDIARSVKVIAEQVKLGALQPSEIDETLLDSYISLADLPKPDLCIR 190
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
T GE+R+S+FLLWQ+AYSE F WPDF AL+ + RDRR+GG
Sbjct: 191 TAGEQRISNFLLWQLAYSELFFTETLWPDFGEHDMIEALSSFESRDRRYGG 241
>gi|329946921|ref|ZP_08294333.1| di-trans,poly-cis-decaprenylcistransferase [Actinomyces sp. oral
taxon 170 str. F0386]
gi|328526732|gb|EGF53745.1| di-trans,poly-cis-decaprenylcistransferase [Actinomyces sp. oral
taxon 170 str. F0386]
Length = 296
Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats.
Identities = 97/238 (40%), Positives = 140/238 (58%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ S+S P H+ ++MDGNGRWA ARGLPR GHR G ++VA A E+G+ L+ +AFS
Sbjct: 36 LPSASLPQHVAVVMDGNGRWANARGLPRTEGHRVGEANLLDVVAGAVEIGVSELSAYAFS 95
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRR E+ ++ + L+ L N+KVR +G L +L L+EAE T
Sbjct: 96 TENWRRSPGEVRFIMGFARKVLRAQRDILHSWNVKVRWVGRTPRLWRSVLRELREAERLT 155
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NTGL L + NY R EI+ A + I +D+ +G + + ++ +I +YL + + D DL
Sbjct: 156 AHNTGLVLNLCINYGGRAEIADATRAIAEDVAAGRLKASSINEKIIQRYLYSPTMRDVDL 215
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTG E+R S+FL+W +Y+E F P WPDF+R + A Y R+RR+GG K
Sbjct: 216 FIRTGDEQRTSNFLMWSSSYAELYFSPLAWPDFNRTELWRACEVYAGRERRYGGAVDK 273
>gi|257068869|ref|YP_003155124.1| Undecaprenyl pyrophosphate synthetase [Brachybacterium faecium DSM
4810]
gi|256559687|gb|ACU85534.1| Undecaprenyl pyrophosphate synthetase [Brachybacterium faecium DSM
4810]
Length = 269
Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats.
Identities = 90/235 (38%), Positives = 144/235 (61%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + + P H+ ++MDGNGRWA RGLPR AGH G ++VA A ++G+ +L+ +AF
Sbjct: 23 QLPAPTIPGHVAVVMDGNGRWANRRGLPRTAGHEAGEAALLDVVAGALQIGVTHLSAYAF 82
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ +S L++ +L +++ IG L ++ L+EAE+
Sbjct: 83 STENWKRSPEEVRFLMGFSRSVLRRQRDTLNSWGVRIVWIGRAQRLWGSVIKELREAEEL 142
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
TR NT + L++ N+ R EI A++ I ++ +G + + + A++L+ D+PD D
Sbjct: 143 TRHNTRMTLYMCVNHGGRAEIVDAVREIAEEARAGRLSARGITMKSFARHLNDPDMPDVD 202
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +RT GE+R S+FLLWQ AY+E VF+ E WPD R + + A+ +Y RDRR+GG
Sbjct: 203 LFLRTSGEQRTSNFLLWQAAYAELVFVEELWPDVDRRVLWRAITEYARRDRRYGG 257
>gi|256825023|ref|YP_003148983.1| Undecaprenyl pyrophosphate synthetase [Kytococcus sedentarius DSM
20547]
gi|256688416|gb|ACV06218.1| Undecaprenyl pyrophosphate synthetase [Kytococcus sedentarius DSM
20547]
Length = 264
Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats.
Identities = 92/235 (39%), Positives = 135/235 (57%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ P H+ ++MDGNGRWA RGLPR AGH G ++VA A E G+ NL+ +AF
Sbjct: 17 ALAPQELPQHVAVVMDGNGRWANERGLPRTAGHEAGEAALLDVVAGAIEAGVPNLSAYAF 76
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRR E+ L+ ++ +++ L +++R IG R L ++ L+ AE
Sbjct: 77 STENWRRSPEEVRFLMGFNRAVIRRRRDQLNAWGVRMRWIGRRPRLWRGVIKELEAAEQM 136
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
TR N L L+ NY R E+ +++I Q++ +G + + ++ I K+L +PD D
Sbjct: 137 TRDNDRLTLYFCVNYGGRAELVDGVRSIAQEVAAGRLTPGGITAATITKHLYDPRMPDVD 196
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R+ GE R S+FLLWQ AY+E F WPDF R + AL +Y RDRRFGG
Sbjct: 197 LFLRSSGEHRTSNFLLWQSAYAELDFPETLWPDFDRRHLWAALERYAGRDRRFGG 251
>gi|188992322|ref|YP_001904332.1| Di-trans,poly-cis-decaprenylcistransferase [Xanthomonas campestris
pv. campestris str. B100]
gi|167734082|emb|CAP52288.1| Di-trans,poly-cis-decaprenylcistransferase [Xanthomonas campestris
pv. campestris]
Length = 258
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 94/242 (38%), Positives = 137/242 (56%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + + + P H+ IIMDGNGRWA R PR GHR G N + + G+ LT+
Sbjct: 6 MHSEPSAVAVPRHLAIIMDGNGRWAQRRRRPRVIGHRAGARAVNRTIDFCLDKGVSALTL 65
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW RP E+ L+KL L +G L++ ++VR IG+R + + A
Sbjct: 66 FAFSSENWGRPQDEVDALMKLFLHALDRGVEELQRRGVQVRFIGDRSRFTAPLRDRMAGA 125
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E T NT L L IA +Y R +I+ A + + ++ +G + +D +L+A + +D+P
Sbjct: 126 ERITAANTRLVLSIAASYGGRQDIAMAARALAVEVAAGRLQPEQIDEALLASRVALADLP 185
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
PDL IRTGG+ R+S+FLLWQ+AY+E F WP+F + AL+ Y R+RRFG S
Sbjct: 186 APDLFIRTGGDTRISNFLLWQLAYTELWFTETLWPEFDAGVLQQALDDYAGRERRFGLTS 245
Query: 241 KK 242
+
Sbjct: 246 AQ 247
>gi|296112768|ref|YP_003626706.1| undecaprenyl pyrophosphate synthetase [Moraxella catarrhalis RH4]
gi|295920462|gb|ADG60813.1| undecaprenyl pyrophosphate synthetase [Moraxella catarrhalis RH4]
gi|326563740|gb|EGE13991.1| undecaprenyl pyrophosphate synthase [Moraxella catarrhalis 46P47B1]
gi|326564387|gb|EGE14615.1| undecaprenyl pyrophosphate synthase [Moraxella catarrhalis 12P80B1]
gi|326567398|gb|EGE17513.1| undecaprenyl pyrophosphate synthase [Moraxella catarrhalis BC1]
gi|326569317|gb|EGE19377.1| undecaprenyl pyrophosphate synthase [Moraxella catarrhalis BC8]
gi|326571476|gb|EGE21491.1| undecaprenyl pyrophosphate synthase [Moraxella catarrhalis BC7]
gi|326575241|gb|EGE25169.1| undecaprenyl pyrophosphate synthase [Moraxella catarrhalis CO72]
gi|326577653|gb|EGE27530.1| undecaprenyl pyrophosphate synthase [Moraxella catarrhalis O35E]
Length = 248
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 84/233 (36%), Positives = 139/233 (59%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI IIMDGN R+ ++ L AGH G + + IV +G++ LT+FAFS NW
Sbjct: 12 IPKHIAIIMDGNNRFGKSKQLATGAGHVAGKDALDPIVEHCLALGVEVLTVFAFSSENWA 71
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ L++L+ + + + ++ I++R IG+R +D D++ ++ +AE +T
Sbjct: 72 RPKDEVDLLMRLLSQTIYEQLPRMNQHRIRLRFIGDRSQIDGDLVKLMAQAEAKTADFDA 131
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ L IA +Y + +I+ A K + + +E G + + D+D +I L+ +D+P D++IRTG
Sbjct: 132 MTLVIAISYGGQWDITNAAKKLAKQVELGHLSADDIDIQMIKTQLELADLPSVDMLIRTG 191
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE R+S+FLLWQ AY+E F P WP+F + + + R+RRFG S++
Sbjct: 192 GEYRISNFLLWQTAYAELFFTPTLWPEFGCDELDEMIRIFAGRERRFGMTSEQ 244
>gi|325519184|gb|EGC98649.1| undecaprenyl diphosphate synthase [Burkholderia sp. TJI49]
Length = 260
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 100/233 (42%), Positives = 137/233 (58%), Gaps = 1/233 (0%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI IIMDGNGRWA R LPR AGH +G++ +V A G++ LT+FAFS NWR
Sbjct: 16 VPRHIAIIMDGNGRWATERRLPRVAGHTRGVDAVRAVVEGCARAGVEYLTLFAFSSENWR 75
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+S L++L + L++ L N I++RV+G+ + I +++ AE +T NT
Sbjct: 76 RPNDEVSFLMRLFITALEREVGKLHANGIRLRVVGDLERFEPRIRELIRRAETKTARNTR 135
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L IA NY R +I +A + +V A +L + P+PDL IRTG
Sbjct: 136 LTLTIAANYGGRWDILQAT-KKLVEQAVREGREVEVTEDAFAPHLAMAYAPEPDLFIRTG 194
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+R+S+FLLWQ+AY+EF F +YWPDF AL Y R+RRFG S +
Sbjct: 195 GEQRVSNFLLWQLAYAEFYFTDKYWPDFDGAALADALASYTERERRFGRTSAQ 247
>gi|219681606|ref|YP_002467992.1| undecaprenyl pyrophosphate synthetase [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|219682163|ref|YP_002468547.1| undecaprenyl pyrophosphate synthetase [Buchnera aphidicola str.
Tuc7 (Acyrthosiphon pisum)]
gi|257471292|ref|ZP_05635291.1| undecaprenyl pyrophosphate synthetase [Buchnera aphidicola str.
LSR1 (Acyrthosiphon pisum)]
gi|219621896|gb|ACL30052.1| undecaprenyl pyrophosphate synthetase [Buchnera aphidicola str.
Tuc7 (Acyrthosiphon pisum)]
gi|219624449|gb|ACL30604.1| undecaprenyl pyrophosphate synthetase [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|311085977|gb|ADP66059.1| undecaprenyl pyrophosphate synthetase [Buchnera aphidicola str.
LL01 (Acyrthosiphon pisum)]
gi|311086551|gb|ADP66632.1| undecaprenyl pyrophosphate synthetase [Buchnera aphidicola str.
TLW03 (Acyrthosiphon pisum)]
gi|311087132|gb|ADP67212.1| undecaprenyl pyrophosphate synthetase [Buchnera aphidicola str.
JF99 (Acyrthosiphon pisum)]
gi|311087670|gb|ADP67749.1| undecaprenyl pyrophosphate synthetase [Buchnera aphidicola str.
JF98 (Acyrthosiphon pisum)]
Length = 251
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 99/231 (42%), Positives = 141/231 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R GH++G E + + +K LT++AFS NW R
Sbjct: 18 PCHVAIIMDGNGRWATRQGKIRIMGHKEGFRAVKEAIKFSIANNLKILTLYAFSSENWNR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P+ EI L++L L +LKK+NI+ +VIG+ D + + AE T NTGL
Sbjct: 78 PLFEIKALMELFLFALDTEIKNLKKHNIRFKVIGDITCFDKKLQNSIHYAEQITFDNTGL 137
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I ++K I ++ G + + + + I++YL TS++ DL+IRTGG
Sbjct: 138 ILNIAANYGGRWDIIESVKKIINRVQRGILDVNKIQENTISQYLSTSELLPVDLVIRTGG 197
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
EKR+S+FLLWQ+AYSE F WPDF+ +F HA++ + R+RRFGG K
Sbjct: 198 EKRISNFLLWQIAYSELYFTDVLWPDFNCHIFQHAIDSFVSRERRFGGFKK 248
>gi|54023420|ref|YP_117662.1| putative undecaprenyl pyrophosphate synthetase [Nocardia farcinica
IFM 10152]
gi|54014928|dbj|BAD56298.1| putative undecaprenyl pyrophosphate synthetase [Nocardia farcinica
IFM 10152]
Length = 267
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 94/237 (39%), Positives = 137/237 (57%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P+H+ ++MDGNGRWA RGLPR AGH +G V + V E+G+K L+ +AF
Sbjct: 31 QLPPELVPNHVALVMDGNGRWAQERGLPRTAGHERGEAVLMDTVEGCIEIGVKWLSAYAF 90
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRR E+ L+ + +++ + + ++VR G R L ++ L+ AE+
Sbjct: 91 STENWRRSPEEVRFLMGFNRDVIRRRRDEMHEMGVRVRWAGRRPRLWRSVIKELEVAEEL 150
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NT L L + NY R EI+ A + I + + +G + VD +A++LD D+PD D
Sbjct: 151 TKDNTVLTLTMCVNYGGRAEIADAAREIARRVAAGEIDPERVDERTVARFLDEPDMPDVD 210
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
L +R GE R S+FLLWQ AY+E+VF +PDF R + A QY RDRRFGG
Sbjct: 211 LFLRPSGEFRTSNFLLWQSAYAEYVFQETLFPDFDRRNLWEACLQYASRDRRFGGTK 267
>gi|46199853|ref|YP_005520.1| undecaprenyl pyrophosphate synthetase [Thermus thermophilus HB27]
gi|42559907|sp|O87197|UPPS_THET2 RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|3724366|dbj|BAA33784.1| unknown ORF [Thermus thermophilus]
gi|46197480|gb|AAS81893.1| probable undecaprenyl pyrophosphate synthetase [Thermus
thermophilus HB27]
Length = 263
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 87/244 (35%), Positives = 137/244 (56%), Gaps = 6/244 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + P H+G+I+DGN R+A A GL GH G++ E++ E+GIK +T+
Sbjct: 20 LLREVKRGPMPRHLGLILDGNRRYARALGLSPTKGHEFGVQKAYEVLEWCLEMGIKTVTV 79
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+ FS +N++RP E+ L+ L ++ + + ++ ++VR IG R +++ ++
Sbjct: 80 WVFSTDNFKRPPEEVETLMNLFLREAERMAEDHRILEHQVRVRFIGRREGFSPEVVRAIE 139
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCS----HDVDSSLIAKYL 174
E +T + G+ L IA Y R+EI A+K + + E+ + + IA++L
Sbjct: 140 RLERRTEGHRGMFLNIALGYGGREEIVDAVKRLLLEAEARGLSPKEVAEGLTPEDIARHL 199
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
T+ +PDPD IIRT GE RLS FLLWQ AYSEF F WP+F + F AL Y R+R
Sbjct: 200 YTAGLPDPDFIIRTSGEIRLSGFLLWQSAYSEFYFADVLWPEFRKIDFLRALRSYQARER 259
Query: 235 RFGG 238
RFG
Sbjct: 260 RFGR 263
>gi|15616852|ref|NP_240065.1| undecaprenyl pyrophosphate synthetase [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|11135212|sp|P57330|UPPS_BUCAI RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|25314041|pir||G84957 di-trans,poly-cis-decaprenylcistransferase (EC 2.5.1.31) [imported]
- Buchnera sp. (strain APS)
gi|10038916|dbj|BAB12951.1| undecaprenyl pyrophosphate synthetase [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
Length = 251
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 99/231 (42%), Positives = 141/231 (61%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA +G R GH++G E + + +K LT++AFS NW R
Sbjct: 18 PCHVAIIMDGNGRWATRQGKIRIMGHKEGFRAVKEAIKFSIANNLKILTLYAFSSENWNR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P+ EI L++L L +LKK+NI+ +VIG+ D + + AE T NTGL
Sbjct: 78 PLFEIKALMELFLFALDTEIKNLKKHNIRFKVIGDITCFDKKLQNSIHYAEQITFDNTGL 137
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IA NY R +I ++K I ++ G + + + + I++YL TS++ DL+IRTGG
Sbjct: 138 ILNIAANYGGRWDIIESVKKIINRVQRGILDVNKIHENTISQYLSTSELLPVDLVIRTGG 197
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
EKR+S+FLLWQ+AYSE F WPDF+ +F HA++ + R+RRFGG K
Sbjct: 198 EKRISNFLLWQIAYSELYFTDVLWPDFNCHIFQHAIDSFVSRERRFGGFKK 248
>gi|290473662|ref|YP_003466534.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase)
[Xenorhabdus bovienii SS-2004]
gi|289172967|emb|CBJ79738.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase)
[Xenorhabdus bovienii SS-2004]
Length = 231
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 87/222 (39%), Positives = 132/222 (59%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA RG R GHR G++ V+ + + I++LT++AFS NW RP E+S
Sbjct: 1 MDGNGRWAKQRGKLRVFGHRAGVKAVRVAVSFSVKHNIESLTLYAFSSENWNRPQQEVSS 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L L SL K+N+K+ VIG+ + ++ + + T NTGL L IA N
Sbjct: 61 LMELFVFALDNEVKSLHKHNVKLSVIGDISRFSSRLQERIRRSVELTAGNTGLQLNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R ++ + +K I + I + + ++ + + ++ S+ P+ DL+IRTGGE R+S+F
Sbjct: 121 YGGRWDLVQGVKQIAEKIRANELEPEEITEATVGSVINLSEQPEVDLVIRTGGEHRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
LLWQ+AY+E F WPDF +F A+N + R+RRFGG
Sbjct: 181 LLWQIAYAELYFTDILWPDFDETVFEGAINAFVKRERRFGGT 222
>gi|134045278|ref|YP_001096764.1| undecaprenyl pyrophosphate synthetase [Methanococcus maripaludis
C5]
gi|132662903|gb|ABO34549.1| Undecaprenyl pyrophosphate synthetase [Methanococcus maripaludis
C5]
Length = 264
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 83/242 (34%), Positives = 130/242 (53%), Gaps = 4/242 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + P H+GIIMDGN R A G GH G +E++ +GI +T+
Sbjct: 23 LESKISKCPLPKHVGIIMDGNRRLAKKLGENPELGHNLGASKVHEVIDWCVSLGIHTITL 82
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFS+ N+ RP E+ L+ L + + + ++ I+V VIG R L + +
Sbjct: 83 YAFSLENFNRPEHEVKVLMDLFEREFIEIANHPNTHRDKIRVSVIGRREMLPKHVQKAIS 142
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
AED+T+ + + A Y + EI ++K I Q ++ + D+ LI+K L TS+
Sbjct: 143 YAEDETKDYSNHFVNFAIAYGGQQEIIDSVKKIAQQVKINEIGIEDITVELISKNLYTSN 202
Query: 179 V--PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
+ P+PDLIIRT GE+R+S+FL WQ YSE F YWP F + F ++ +Y R+RR+
Sbjct: 203 LPSPNPDLIIRTSGEERISNFLTWQSCYSELYFCETYWPTFRKIDFLRSIREYQKRERRY 262
Query: 237 GG 238
G
Sbjct: 263 GK 264
>gi|262376191|ref|ZP_06069421.1| di-trans,poly-cis-decaprenylcistransferase [Acinetobacter lwoffii
SH145]
gi|262308792|gb|EEY89925.1| di-trans,poly-cis-decaprenylcistransferase [Acinetobacter lwoffii
SH145]
Length = 250
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 86/242 (35%), Positives = 139/242 (57%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + +S P H+ IIMDGN R+A + + GHR+G V + IV + I+ LT+
Sbjct: 1 MTVAEENSRLPKHVAIIMDGNNRFAKKNQMQKGDGHREGKTVLDPIVEHCKKRNIQALTV 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW RP E+ L+KL+ + + ++K NI +R IG+R L ++ ++ A
Sbjct: 61 FAFSSENWNRPQFEVELLMKLLVDTIHEQLPRMEKFNIALRFIGDRSRLSPELQGLMLHA 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E++T + L IA +Y ++++A + I D+ + + +++ + +Y+ D+P
Sbjct: 121 EERTANFNSMTLTIAISYGGMWDMAQAAQRIASDVLTNKLDLDAINTDVFGQYVSLGDLP 180
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRTGG+ RLS+FLLWQ AY+E F WP+F+ E AL + R+RRFG S
Sbjct: 181 AVDLLIRTGGDFRLSNFLLWQAAYAELYFTETLWPEFTVEELDDALAVFGGRERRFGKTS 240
Query: 241 KK 242
++
Sbjct: 241 EQ 242
>gi|148553388|ref|YP_001260970.1| undecaprenyl pyrophosphate synthetase [Sphingomonas wittichii RW1]
gi|148498578|gb|ABQ66832.1| Undecaprenyl pyrophosphate synthetase [Sphingomonas wittichii RW1]
Length = 248
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 102/231 (44%), Positives = 152/231 (65%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+ P H+ IIMDGNGRWA R LPR AGHR G E V AAA++G++ LT++AFS N
Sbjct: 17 GTAPRHVAIIMDGNGRWAKRRFLPRVAGHRAGAEAVRTTVKAAADMGLQALTLYAFSSEN 76
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRR E+S+L+ L++ +L+K L +N I++R IG+ L+ D++ +++E ++T+ N
Sbjct: 77 WRRSTEEVSDLMGLLRHYLRKEVAELDRNGIRLRTIGDINGLEGDLVDLVREGVERTKHN 136
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L+ +A NY ++DE+ RA++ I D+ G + D+ S++I LDT D+P DL+IR
Sbjct: 137 RRLDFVLALNYGAQDEMVRAVREIAADVRDGRLAPEDICSAVIDGRLDTQDLPPLDLLIR 196
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
T GE+RLS+FLLWQ AY+E +F+ WPDF A+ + R+RRFGG
Sbjct: 197 TSGERRLSNFLLWQAAYAELLFVDTLWPDFDGAALAAAIADFGARERRFGG 247
>gi|146319618|ref|YP_001199330.1| undecaprenyl pyrophosphate synthase [Streptococcus suis 05ZYH33]
gi|145690424|gb|ABP90930.1| Undecaprenyl pyrophosphate synthase [Streptococcus suis 05ZYH33]
Length = 288
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 102/237 (43%), Positives = 137/237 (57%), Gaps = 4/237 (1%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+S P HI +IMDGN R R PR GH+ ++ ++ A+++G+K LT++AFS
Sbjct: 52 ASEVPKHIVVIMDGNARLVIKRMQPRIMGHKAYMDALQKVTKTASDLGVKVLTVYAFSTE 111
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP E+ ++ L F K L NN+K+++IG+ L L L +AE +T+
Sbjct: 112 NWSRPEKEVKFIMNLPVEFYDKYVPELHANNVKIQMIGDHSKLPVPTLNALYKAEQKTKG 171
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DP 182
NTGL L A NY RDE++RA+ I QD+ D+D LIA YL T + DP
Sbjct: 172 NTGLILNFALNYGGRDEVTRAVNAIAQDVLDAKFNPGDIDEKLIADYLYTGTLSPTLRDP 231
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DL+IRT GE RLS+FL WQ AYSE F WPDF E A+ +YN R RRFGG+
Sbjct: 232 DLVIRTSGELRLSNFLPWQTAYSELYFTDIAWPDFDGEALKLAIKEYNRRHRRFGGV 288
>gi|323341771|ref|ZP_08082004.1| di-trans,poly-cis-decaprenylcistransferase [Erysipelothrix
rhusiopathiae ATCC 19414]
gi|322464196|gb|EFY09389.1| di-trans,poly-cis-decaprenylcistransferase [Erysipelothrix
rhusiopathiae ATCC 19414]
Length = 226
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 94/228 (41%), Positives = 135/228 (59%), Gaps = 6/228 (2%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA + R GH G E +I A ++G++ +T++AFS NW+RP
Sbjct: 5 KHVAIIMDGNGRWATKQKKERTFGHYYGSENVRDIALEALDLGVEVITLYAFSTENWKRP 64
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
EI L+KL F +K L + I++R IG+ + V+ A ++T+ N L
Sbjct: 65 QKEIDYLMKLPAVFFEKFLNELMEKGIQIRTIGDLTKIPARTRKVMDNAVERTKDNNKLI 124
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L A NY SRDEI RA ++I D V ++ YLDT +P DL+IRTGG+
Sbjct: 125 LNFALNYGSRDEIVRAAQSIVDDG------IETVTETVFESYLDTFGLPPVDLLIRTGGD 178
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+RLS++LLWQ+AY+E +F+ WP+F R +F + +N R+RRFGGL
Sbjct: 179 RRLSNYLLWQLAYAELLFVDVQWPEFDRPMFKSCVEDFNQRNRRFGGL 226
>gi|260903904|ref|ZP_05912226.1| undecaprenyl diphosphate synthase [Brevibacterium linens BL2]
Length = 258
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 87/235 (37%), Positives = 130/235 (55%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ S P+H+ ++MDGNGRWA RGLPR GH+ G E++ A E+G+ L+ +AF
Sbjct: 17 RIESKFVPNHVAVVMDGNGRWANDRGLPRTEGHKAGEASLLEVIHGAIEMGVDYLSAYAF 76
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + +++ L +++ G R L ++ L+ A +
Sbjct: 77 STENWKRSPDEVRFLMGFNRDVIRRRRDELNALGVRIVWAGRRGRLWRSVIDELETAAEM 136
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NTGL L NY R EI A+ I ++ +G + V + L ++VPD D
Sbjct: 137 TKHNTGLVLQFCVNYGGRSEIVDAVNQITAEVAAGKLKPGKVSEKTVRSRLYAAEVPDVD 196
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R+ GE+R S+FLLWQ AY+E VF WPD R + A+ +Y RDRRFGG
Sbjct: 197 LFLRSSGEQRTSNFLLWQSAYAEMVFQDVLWPDVDRRTLWSAIEEYARRDRRFGG 251
>gi|319440590|ref|ZP_07989746.1| hypothetical protein CvarD4_02387 [Corynebacterium variabile DSM
44702]
Length = 245
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 89/237 (37%), Positives = 139/237 (58%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P HI ++MDGNGRWA +GLPR GH++G V ++V E+G+ L+ +AF
Sbjct: 9 EIPAELIPRHIALVMDGNGRWATQQGLPRTEGHKRGEAVLMDMVDECLELGVDVLSAYAF 68
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRR E+ L+ + L++ L ++VR G R L ++ L++AE Q
Sbjct: 69 STENWRRSADEVRFLMGFNRDVLRRRRDELDAKGVRVRWAGRRPRLWRSVISELEKAEVQ 128
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NT + L + NY R E++ A + I D+ +G + +V+ ++ YLD +PD D
Sbjct: 129 TKDNTRMTLVMCVNYGGRAELTDAARAIAGDVAAGKLKPREVNEKVVESYLDEPGLPDVD 188
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
L +R GE+R+S+FLLWQ AY+E V+ +PD++R A+ +Y RDRRFGG+
Sbjct: 189 LFLRPSGEQRISNFLLWQSAYAEMVYQDVLFPDYTRADLKDAVYEYARRDRRFGGVK 245
>gi|317125250|ref|YP_004099362.1| undecaprenyl pyrophosphate synthetase [Intrasporangium calvum DSM
43043]
gi|315589338|gb|ADU48635.1| Undecaprenyl pyrophosphate synthetase [Intrasporangium calvum DSM
43043]
Length = 257
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 94/239 (39%), Positives = 144/239 (60%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S+ +++ P H+ I+MDGNGRWA ARGLPR GH G ++VA A EVG+ +L+ +AF
Sbjct: 15 SIPAAALPKHVAIVMDGNGRWANARGLPRTKGHEAGEASLLDVVAGAIEVGVTHLSAYAF 74
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRR E+ L+ + +++ L + +++R +G L ++ L+ A++
Sbjct: 75 STENWRRSPDEVRFLMGFNRDVIRRRRDQLHEWGVRMRWVGRSPRLWRSVIKELEVAQEL 134
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NTGL L+ NY R E++ A++ I +D +G + VD I +YLD +PD D
Sbjct: 135 TKDNTGLTLYFCVNYGGRAELADAVRRIAEDARAGRLRPSSVDERTITRYLDEPSMPDVD 194
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L +R+ GE+R S+FLLWQ AY+E VF WPD+ R + A+ +Y RDRR+GG +
Sbjct: 195 LFVRSSGEQRTSNFLLWQSAYAEMVFQNRLWPDYDRRDLWAAIEEYVARDRRYGGAVDQ 253
>gi|269138098|ref|YP_003294798.1| undecaprenyl pyrophosphate synthase [Edwardsiella tarda EIB202]
gi|267983758|gb|ACY83587.1| undecaprenyl pyrophosphate synthase [Edwardsiella tarda EIB202]
gi|304558142|gb|ADM40806.1| Undecaprenyl pyrophosphate synthetase [Edwardsiella tarda FL6-60]
Length = 231
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 88/223 (39%), Positives = 128/223 (57%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA +G R GH+ G++ V A GI+ LT++AFS NW RP E+S
Sbjct: 1 MDGNGRWAKRQGKMRVFGHKAGVKSVRCAVRFAVTRGIRALTLYAFSSENWNRPQQEVSA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L L L K+ ++++VIG+ + ++ +E T NTGL L IA N
Sbjct: 61 LMELFVRALDSEVKRLHKHQVRLKVIGDISRFSPRLQERIRRSEQMTAENTGLTLNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I + +K + + + G++ + S++ + + D DL+IRTGGE R+S+F
Sbjct: 121 YGGRWDIVQGVKTLAEQVRQGTLLPEAITESMLGEQICLHDQDAVDLVIRTGGEHRVSNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LLWQ+AYSEF F WPDF F ALN + R+RRFGG +
Sbjct: 181 LLWQIAYSEFYFTDVLWPDFDETTFEGALNAFAQRERRFGGTT 223
>gi|255323741|ref|ZP_05364869.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
tuberculostearicum SK141]
gi|255299231|gb|EET78520.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
tuberculostearicum SK141]
Length = 251
Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 86/232 (37%), Positives = 134/232 (57%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI ++MDGNGRWA +G+ R GHR+G V ++V A G+ L+ +AFS NWR
Sbjct: 20 MPRHIALVMDGNGRWAQEKGMKRTEGHRRGEAVLLDVVDACLAAGVPYLSAYAFSTENWR 79
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ L+ + L++ L + ++V G R L ++ L+ A++ T+ NT
Sbjct: 80 RSPEEVRFLMGFNRDVLRRQREWLNERGVRVVWAGRRPRLWRSVIKELEAAQELTKDNTK 139
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ L + NY R E+ ++I + + +G + D+ IA++L +PD DL +R
Sbjct: 140 MTLAMCVNYGGRAELVDGFRDIAKQVAAGELNPRDIKEETIAQHLYDPSMPDVDLFLRPS 199
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
GEKR S+FLLWQ AY+E ++ + +PDF+ E F A+ +Y RDRRFGG+ K
Sbjct: 200 GEKRTSNFLLWQSAYAEMIYQDKLFPDFTPEDLFAAIEEYARRDRRFGGVKK 251
>gi|240172988|ref|ZP_04751646.1| putative undecaprenyl pyrophosphate synthetase [Mycobacterium
kansasii ATCC 12478]
Length = 297
Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 86/234 (36%), Positives = 140/234 (59%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P+H+ I+MDGNGRWA RGL R GH+ G V +I A E+GIK L+++AF
Sbjct: 62 RIPADRLPNHVAIVMDGNGRWATQRGLRRTEGHKMGEAVVIDIACGAIELGIKWLSLYAF 121
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + +++ +LK+ +++R +G+R L ++ L AE
Sbjct: 122 STENWKRSAEEVRFLMGFNRDVVRRRRENLKEMGVRIRWVGSRPRLWRSVINELAVAEQM 181
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N + + NY R EI+ A + I +++ +G + + S I++Y+ D+PD D
Sbjct: 182 TKYNDVITINYCVNYGGRTEIADATRQIAREVAAGRLNPERISESTISRYMQRPDIPDVD 241
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
L +RT GE+R S+F+LWQ AY+E++F + WPD+ R + A +Y R+RRFG
Sbjct: 242 LFLRTSGEQRSSNFMLWQAAYAEYIFQDKLWPDYDRRDLWAACEEYASRNRRFG 295
>gi|313115646|ref|ZP_07801102.1| di-trans,poly-cis-decaprenylcistransferase [Faecalibacterium cf.
prausnitzii KLE1255]
gi|310622032|gb|EFQ05531.1| di-trans,poly-cis-decaprenylcistransferase [Faecalibacterium cf.
prausnitzii KLE1255]
Length = 237
Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 97/226 (42%), Positives = 145/226 (64%), Gaps = 1/226 (0%)
Query: 14 IGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVS 73
IGIIMDGNGRWA RGLPR AGH++G EVF++I E+G+ ++ +AFS NW+RP+
Sbjct: 13 IGIIMDGNGRWAKNRGLPRTAGHKRGAEVFSDIADYCDELGVSSVYFYAFSTENWKRPLE 72
Query: 74 EISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLF 133
E++ +++L +L KGF K NI+++ +G+R LD+ + ++ + E + + TG+ L
Sbjct: 73 EVNAIMRLFGEYLLKGFD-YKNRNIRIKFMGDRTVLDEKLQQLMNKLEADSSVKTGMTLN 131
Query: 134 IAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKR 193
IA NY R EI RA + + +G + ++ L++ + T+ DPD I+R GEKR
Sbjct: 132 IAINYGGRPEIVRAAQQLATKAAAGEIKPEEITEQLLSDAMYTAGQKDPDFILRPSGEKR 191
Query: 194 LSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
LS+F+LWQ AYSE V + WPDF+R A+ ++N R RRFGGL
Sbjct: 192 LSNFMLWQAAYSELVEMDVLWPDFTRSDLDAAIEEFNHRSRRFGGL 237
>gi|118594909|ref|ZP_01552256.1| Undecaprenyl pyrophosphate synthase [Methylophilales bacterium
HTCC2181]
gi|118440687|gb|EAV47314.1| Undecaprenyl pyrophosphate synthase [Methylophilales bacterium
HTCC2181]
Length = 244
Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 104/234 (44%), Positives = 138/234 (58%), Gaps = 6/234 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ PDHI +IMDGNGRWA R LPR AGH KG E +IV + IK LT+F FS
Sbjct: 11 KPTKLPDHIAVIMDGNGRWAKKRFLPRIAGHSKGTEAAEKIVKYCFKYHIKTLTLFTFST 70
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP E+ L+ L + + K SL KNNI +R IG++ +++ L+E E
Sbjct: 71 ENWQRPDEEVDGLLNLFEESIVKSRASLIKNNIAIRFIGDKKLFSEELQRKLQELEKTCS 130
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N GL+L IA NY R EI RA +Q + + S + +LDT+ +P+ DL+
Sbjct: 131 KNNGLDLNIALNYGGRSEIVRAANTFYQKVGKL------ITESELTNHLDTAGMPEVDLL 184
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
IRTGGEKR+S+FLLWQ+AY+E F WPDFS E F AL + +R+FG L
Sbjct: 185 IRTGGEKRVSNFLLWQIAYAELFFTNVLWPDFSEEHFVEALQWFQKTNRKFGKL 238
>gi|55981884|ref|YP_145181.1| undecaprenyl pyrophosphate synthase [Thermus thermophilus HB8]
gi|73920283|sp|Q5SH15|UPPS_THET8 RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|55773297|dbj|BAD71738.1| probable undecaprenyl pyrophosphate synthetase [Thermus
thermophilus HB8]
Length = 263
Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 87/244 (35%), Positives = 137/244 (56%), Gaps = 6/244 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + P H+G+I+DGN R+A A GL GH G++ E++ E+GIK +T+
Sbjct: 20 LLREVKRGPMPRHLGLILDGNRRYARALGLSPTKGHEFGVQKAYEVLEWCLEMGIKTVTV 79
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+ FS +N++RP E+ L+ L ++ + + ++ ++VR IG R +++ ++
Sbjct: 80 WVFSTDNFKRPPEEVETLMNLFLREAERMAEDHRILEHQVRVRFIGRREGFSPEVVRAIE 139
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCS----HDVDSSLIAKYL 174
E +T + G+ L IA Y R+EI A+K + + E+ + + IA++L
Sbjct: 140 RLERRTEGHRGMFLNIAMGYGGREEIVDAVKRLLLEAEARGLSPKEVAEGLTPEDIARHL 199
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
T+ +PDPD IIRT GE RLS FLLWQ AYSEF F WP+F + F AL Y R+R
Sbjct: 200 YTAGLPDPDFIIRTSGEIRLSGFLLWQSAYSEFYFADVLWPEFRKIDFLRALRSYQARER 259
Query: 235 RFGG 238
RFG
Sbjct: 260 RFGR 263
>gi|327480158|gb|AEA83468.1| undecaprenyl diphosphate synthase [Pseudomonas stutzeri DSM 4166]
Length = 238
Score = 266 bits (679), Expect = 3e-69, Method: Composition-based stats.
Identities = 89/228 (39%), Positives = 136/228 (59%)
Query: 15 GIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSE 74
IIMDGN RWA R LP AGH+ G++ ++ A+ G++ LT+FAFS NW+RP E
Sbjct: 2 AIIMDGNNRWAKRRLLPGVAGHKAGVDAVRAVIEVCADSGVEVLTLFAFSSENWQRPADE 61
Query: 75 ISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFI 134
+ L++L S L++ L +N I++R+IG+R ++ + E E+ T N L +
Sbjct: 62 VGALMELFLSALRREARKLDENGIRLRIIGDRSRFHPELQAAMLEVEEMTAANHRFVLQV 121
Query: 135 AFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRL 194
A NY + +I +A +++ + ++G + ++ +L YL T D+P PDL IRTGGE+R+
Sbjct: 122 AANYGGQWDILQAAQHLATEAQAGRLNPAEITPALFQSYLATGDMPLPDLCIRTGGERRI 181
Query: 195 SDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
S+FLLWQ+AY+E F YWPDF AL + R RRFG ++
Sbjct: 182 SNFLLWQLAYAELYFSDLYWPDFKHVAMRKALADFATRQRRFGKTGEQ 229
>gi|94676664|ref|YP_588962.1| undecaprenyl diphosphate synthase [Baumannia cicadellinicola str.
Hc (Homalodisca coagulata)]
gi|94219814|gb|ABF13973.1| undecaprenyl diphosphate synthase [Baumannia cicadellinicola str.
Hc (Homalodisca coagulata)]
Length = 253
Score = 266 bits (679), Expect = 3e-69, Method: Composition-based stats.
Identities = 89/230 (38%), Positives = 136/230 (59%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA + GH+ G++ ++ A + +K LT++AFS NW R
Sbjct: 17 PQHVAIIMDGNGRWAKKQSKLPIFGHQAGVKSVRRAISFAVQHKLKALTLYAFSRENWHR 76
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
PV ++S L++L L L K+NI + +IG+ + ++ AE T N GL
Sbjct: 77 PVQDVSALMELFIRLLDSKINILHKHNICLNIIGDIDRFSFRLQELICRAETLTSKNDGL 136
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL IA NYS R +I +++K I I+ G + ++ ++++Y+ + + DL+IRTGG
Sbjct: 137 NLNIAANYSGRWDIIKSVKKIAIKIQQGMLRPDQINEEILSRYICMNKLAPVDLVIRTGG 196
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E+R+S+FLLWQ+AY+E F WPDF+ +F ALN + R+RRFG
Sbjct: 197 EQRISNFLLWQIAYAELFFTKVLWPDFNDIVFESALNAFAQRERRFGRTK 246
>gi|156544802|ref|XP_001606412.1| PREDICTED: similar to dehydrodolichyl diphosphate synthase
(dedol-pp synthase) [Nasonia vitripennis]
Length = 300
Score = 266 bits (679), Expect = 3e-69, Method: Composition-based stats.
Identities = 81/234 (34%), Positives = 132/234 (56%), Gaps = 3/234 (1%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + + + P H+ IIMDGN R+A G+ R GH KG E E + E GI +T++
Sbjct: 17 IKILRTGNIPRHVAIIMDGNRRYANKIGVERLEGHSKGFEKLAETLQWCLEFGIPEVTVY 76
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKK---GFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
AFSI N++R E+ L+ L + ++ L ++ + +R+IGN + D+ ++
Sbjct: 77 AFSIENFKRSDKEVDGLMDLARRKFQRLLDERDKLMEHGVCIRIIGNLSFVPQDVRSLMA 136
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
EA T+ N L +AF+Y+SRDEI+ + +I + +++G + D+D +L +K L T +
Sbjct: 137 EAMRITKDNNKAFLNVAFSYTSRDEITNTVSDIVRHVKNGDITVDDIDENLFSKCLYTHN 196
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLR 232
DPDL+IRT GE R SDFL+WQ +++ F WP+FS +A+ Y
Sbjct: 197 SEDPDLLIRTSGEVRFSDFLMWQTSHTCVYFTKVLWPEFSAWDLIYAVFYYQRC 250
>gi|58581595|ref|YP_200611.1| undecaprenyl pyrophosphate synthase [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84623519|ref|YP_450891.1| undecaprenyl pyrophosphate synthetase [Xanthomonas oryzae pv.
oryzae MAFF 311018]
gi|73920286|sp|Q5H1E5|UPPS_XANOR RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|58426189|gb|AAW75226.1| undecaprenyl pyrophosphate synthetase [Xanthomonas oryzae pv.
oryzae KACC10331]
gi|84367459|dbj|BAE68617.1| undecaprenyl pyrophosphate synthetase [Xanthomonas oryzae pv.
oryzae MAFF 311018]
Length = 258
Score = 266 bits (679), Expect = 3e-69, Method: Composition-based stats.
Identities = 93/235 (39%), Positives = 133/235 (56%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+ P HI IIMDGNGRWA R PR GHR G N + E G+ LT+FAFS N
Sbjct: 13 ADVPRHIAIIMDGNGRWAQRRRRPRVIGHRAGARAVNRTIDFCLEKGVSALTLFAFSSEN 72
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP E+ L+KL L + L++ ++VR IG+R + + AE T N
Sbjct: 73 WGRPQDEVDALMKLFLHALDREVGELQRRGVQVRFIGDRSRFAAPLRDRMAGAERSTAAN 132
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L L IA +Y R +I+ A + + +D+ +G + +D +L++ + +D+P PDL IR
Sbjct: 133 ARLVLSIAASYGGRQDIATAARALAEDVAAGRLQPEQIDEALLSSRVALADLPAPDLFIR 192
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGG+ R+S+FLLWQ+AY+E F WP+F + AL+ Y R+RRFG S +
Sbjct: 193 TGGDTRISNFLLWQLAYTELWFTETLWPEFDAGVMQQALDDYAGRERRFGLTSAQ 247
>gi|198283288|ref|YP_002219609.1| undecaprenyl diphosphate synthase [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|198247809|gb|ACH83402.1| undecaprenyl diphosphate synthase [Acidithiobacillus ferrooxidans
ATCC 53993]
Length = 253
Score = 266 bits (679), Expect = 3e-69, Method: Composition-based stats.
Identities = 108/240 (45%), Positives = 158/240 (65%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + + P HI +IMDGNGRWA R LPR AGHR+G EV E+V + A++GI LT+FA
Sbjct: 4 ADLTPPAMPRHIAVIMDGNGRWAYRRHLPRVAGHRRGAEVVREMVQSCADLGIPYLTLFA 63
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP E+ L+ L + L++ L +N +++R+IG+R +LD +I ++ EAE
Sbjct: 64 FSTENWRRPAIEVRLLMNLFRLLLRREARKLHENGVRLRIIGDRSALDPEICQLIDEAEA 123
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
TR N L L +A NY R +I++A + +++G + D ++ IA++L +D+P+P
Sbjct: 124 LTRNNQRLQLNLAVNYGGRWDIAQAARAAMAAVQAGDLALEDFSAAHIARHLCLADIPEP 183
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
DL+IRTGGE+R+S+FLLWQ+AY+EF F WPDF+R HAL+ + R RRFG +
Sbjct: 184 DLLIRTGGEERISNFLLWQLAYTEFYFSDTLWPDFNRAALEHALHSFAHRQRRFGRTGDQ 243
>gi|322434731|ref|YP_004216943.1| undecaprenyl diphosphate synthase [Acidobacterium sp. MP5ACTX9]
gi|321162458|gb|ADW68163.1| undecaprenyl diphosphate synthase [Acidobacterium sp. MP5ACTX9]
Length = 301
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 96/254 (37%), Positives = 143/254 (56%), Gaps = 15/254 (5%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ + S P H+ IIMDGNGRWA R L R GH++G E +V A+ + + LT++A
Sbjct: 21 SQLDPSRIPRHVAIIMDGNGRWAGKRTLKRFKGHQQGAESVQFVVETASRIDLPWLTLYA 80
Query: 63 FSINN-WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
FS+ N RRP SE+S L+ L+KS+L + NN+++ IG L L +I ++ A
Sbjct: 81 FSLENNLRRPKSEVSFLMTLLKSYLVGNVKRMNDNNVRMAYIGRTLGLPQEIQDTMQWAS 140
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRA----IKNIFQDIESGSVCSHD----------VDS 167
++T NTG L +A NY SR EI A ++ + + + D +D
Sbjct: 141 EETSKNTGTTLTLALNYGSRSEIVDATRSLVEKLIDEAHHRGISLEDLLQVDSLDSRIDE 200
Query: 168 SLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALN 227
+ ++ L T+ +PDPDL+IRT GE+R+S+FLLWQ+AYSE WPDF A+
Sbjct: 201 AQLSANLYTAHMPDPDLVIRTSGEQRISNFLLWQIAYSEIFVTDRLWPDFRGVHLLEAIE 260
Query: 228 QYNLRDRRFGGLSK 241
+ R+RR+GGL +
Sbjct: 261 NFQHRERRYGGLGE 274
>gi|32266592|ref|NP_860624.1| hypothetical protein HH1093 [Helicobacter hepaticus ATCC 51449]
gi|42559769|sp|Q7VH74|UPPS_HELHP RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|32262643|gb|AAP77690.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
Length = 237
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 96/238 (40%), Positives = 139/238 (58%), Gaps = 4/238 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M S P HI +IMDGNGRWA +G R GH++G ++ +I AE GI LT++AFS
Sbjct: 1 MKPSYPQHIAVIMDGNGRWAKKQGKKRTQGHKEGAKIVRDITQWCAEKGIPYLTLYAFST 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP E+ L+KL++ +L KN+I+ RVIG+ + + + E E T+
Sbjct: 61 ENWKRPKIEVDFLMKLLEKYLHDEKPVYMKNHIRFRVIGDISVFNTRLKNAILELEHATQ 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQ---DIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
+T L +A NY SRDEI+R + S+ S D+ S +I LDT+ +PD
Sbjct: 121 NHTKLTQILALNYGSRDEIARTFIKLAHTLTPHTLASLSSQDIIS-MINANLDTATLPDV 179
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
D++IRTGGEKR+S+F+LWQ +Y+E F P +P F + L ++ R RRFGG+
Sbjct: 180 DMLIRTGGEKRISNFMLWQASYAELFFTPTLFPSFGKNELNAMLEEFLQRQRRFGGVE 237
>gi|254420006|ref|ZP_05033730.1| undecaprenyl diphosphate synthase [Brevundimonas sp. BAL3]
gi|196186183|gb|EDX81159.1| undecaprenyl diphosphate synthase [Brevundimonas sp. BAL3]
Length = 252
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 92/228 (40%), Positives = 137/228 (60%), Gaps = 1/228 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA+ARGLPR GHR+G++ + AA + GI+ LT+F FS NW R
Sbjct: 16 PRHVAIIMDGNGRWASARGLPRTMGHREGVQALKRTIQAAPDFGIQCLTVFGFSTENWSR 75
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S+L+ L+++++ L+K +++R++G R L DI ++++AE QT N
Sbjct: 76 PAEEVSDLMGLVRTYVASDLARLEKAGVRLRILGRRDGLPSDIAAIIEKAERQTAHNDRF 135
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +AFNY R ++ A + +D +A L T+ P DLI+RT G
Sbjct: 136 MLQVAFNYGGRADLVDAARRH-MQRLLAGETVEPIDEDTLAAGLATAGSPPLDLIVRTSG 194
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+RLS+FLLW+ AY+E VF WPD+ + A+ + R+RR+GG
Sbjct: 195 EQRLSNFLLWEAAYAELVFQDILWPDYGPKALGEAVAAFAQRERRYGG 242
>gi|329935269|ref|ZP_08285235.1| undecaprenyl pyrophosphate synthetase [Streptomyces
griseoaurantiacus M045]
gi|329305092|gb|EGG48951.1| undecaprenyl pyrophosphate synthetase [Streptomyces
griseoaurantiacus M045]
Length = 257
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 88/238 (36%), Positives = 128/238 (53%), Gaps = 7/238 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P HIG+IMDGN RWA A G GHR G + E + +E ++ +T++ FS
Sbjct: 23 LDHDQVPKHIGVIMDGNRRWAKAAGSTTAQGHRAGADKIEEFLGWCSETDVEVVTLWLFS 82
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
+N+ RP E+ L +I+ + +V +G L + VLKEAE+ T
Sbjct: 83 TDNFDRPQEELVPLFGIIEDVARSL---AADGRWRVHHVGALDLLPPGMQTVLKEAEEAT 139
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVC----SHDVDSSLIAKYLDTSDVP 180
G+ + +A Y R EI+ A++++ D + + VD +I ++L TSD P
Sbjct: 140 ADVDGILVNVAIGYGGRQEIADAVRSMLHDAQQKGTTMEQLAESVDIDMIGRHLYTSDQP 199
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DPDL+IRT GE+RLS F+LWQ A+SE+ F +WP F + F AL Y R RRFGG
Sbjct: 200 DPDLVIRTSGEQRLSGFMLWQTAHSEYYFCDVFWPAFRKVDFLRALRDYAARHRRFGG 257
>gi|332527874|ref|ZP_08403911.1| undecaprenyl pyrophosphate synthetase [Rubrivivax benzoatilyticus
JA2]
gi|332112451|gb|EGJ12244.1| undecaprenyl pyrophosphate synthetase [Rubrivivax benzoatilyticus
JA2]
Length = 256
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 92/231 (39%), Positives = 135/231 (58%), Gaps = 4/231 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P H+ ++MDGNGRWA R +PR GH++G++ V AE G++ LT+FAFS NW
Sbjct: 20 AIPRHVAVVMDGNGRWARQRYMPRFFGHKQGVDALVRAVNVFAERGVEYLTVFAFSSENW 79
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP E+S L+ L+ + K + + +++R+IG+R ++ D + AE T N
Sbjct: 80 KRPSDEVSGLMGLVLVAVSKYLAKMAGDGVRIRIIGDRSAVSDKLREAWDRAEALTADNH 139
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+ L +AFNY R ++ +A + D + D D S +++++ S PDPDL IRT
Sbjct: 140 RITLSVAFNYGGRWDVVQACRQAMAD----GIRPEDFDESYLSRHMALSFAPDPDLFIRT 195
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GGE R+S+FLLWQ AYSE F WPDF AL + RDRRFGG+
Sbjct: 196 GGEMRMSNFLLWQAAYSELFFTECLWPDFGEAEIDAALAAFAQRDRRFGGI 246
>gi|256372046|ref|YP_003109870.1| undecaprenyl diphosphate synthase [Acidimicrobium ferrooxidans DSM
10331]
gi|256008630|gb|ACU54197.1| undecaprenyl diphosphate synthase [Acidimicrobium ferrooxidans DSM
10331]
Length = 241
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 96/241 (39%), Positives = 141/241 (58%), Gaps = 5/241 (2%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + ++ P H+ +MDGNGRWA GLPR GH G ++V A EVG++ LT++
Sbjct: 5 LERIDTTRVPLHVAFVMDGNGRWAQRYGLPRTQGHAAGETALFDVVEGALEVGVRWLTVY 64
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRL-SLDDDILCVLKEA 120
AFS NWRRP E+ L+ +S L++ L +++R +G R + + + A
Sbjct: 65 AFSTENWRRPPDEVRFLMNFNRSLLRRRRDELNDRGVRIRFLGRRSRRVPPSVTREMDLA 124
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ T N L L +AFNY R EI A++ I + V + +D S +A +L D+P
Sbjct: 125 AELTAHNDRLTLTMAFNYGGRAEIVDALRRIVAE----GVPARAIDESTVASHLYFPDMP 180
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL++RT GE R+S+FLLWQ+AY+E VF+ WPD RE F A+ +Y RDRRFGG+
Sbjct: 181 DPDLVVRTSGEYRISNFLLWQLAYAELVFLDTLWPDVRREHLFEAIAEYQGRDRRFGGVG 240
Query: 241 K 241
+
Sbjct: 241 R 241
>gi|332670836|ref|YP_004453844.1| undecaprenyl diphosphate synthase [Cellulomonas fimi ATCC 484]
gi|332339874|gb|AEE46457.1| undecaprenyl diphosphate synthase [Cellulomonas fimi ATCC 484]
Length = 300
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 93/235 (39%), Positives = 139/235 (59%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ P H+ ++MDGNGRWA ARGLPR GHR G ++VA A E+G+++++ +AF
Sbjct: 55 AIPKQFVPRHVAVVMDGNGRWANARGLPRTEGHRAGEASLLDVVAGAIEIGVEHVSAYAF 114
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW R E+ L+ + L++ + ++VR G R L ++ L+EAE
Sbjct: 115 STENWSRSPDEVRFLMGFNRDVLRRRRDLMHSWGVRVRWAGRRPRLWRSVIAELEEAERL 174
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NT L + NY R EI+ A + I +++ +G + V+ A+YLD D+PD D
Sbjct: 175 TKDNTTCTLTMCVNYGGRAEIADAAQAIAREVAAGRLKPERVNEKTFARYLDEPDMPDVD 234
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R+ GE+R S+FLLWQ AY+E VF+ E WPD R + A+ Y RDRR+GG
Sbjct: 235 LFLRSSGEQRTSNFLLWQAAYAELVFLDEPWPDVDRRHLWRAVETYARRDRRYGG 289
>gi|306836626|ref|ZP_07469592.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
accolens ATCC 49726]
gi|304567456|gb|EFM43055.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
accolens ATCC 49726]
Length = 250
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 86/237 (36%), Positives = 135/237 (56%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ P HI ++MDGNGRWA +G+ R GHR+G V ++V A G+ L+ +AF
Sbjct: 14 NIPDELLPRHIALVMDGNGRWAQEKGMKRTEGHRRGEAVLLDVVDACLAAGVPYLSAYAF 73
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRR E+ L+ + L++ L + ++V +G R L ++ L+ AE+
Sbjct: 74 STENWRRSPEEVRFLMGFNRDVLRRQREWLHERGVRVVWVGRRPRLWRSVIKELEAAEEL 133
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NT + L + NY R E+ ++ I + + +G + D+ S IA+ L +PD D
Sbjct: 134 TKNNTKMTLAMCVNYGGRAEMVDGVRQIAEKVAAGEIRPRDIRESTIAENLYDPGMPDVD 193
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
L +R GEKR S+FLLWQ AY+E ++ + +PDF+ E F A+ +Y RDRRFG +
Sbjct: 194 LFLRPSGEKRTSNFLLWQSAYAEMIYQDKLFPDFTPEDLFAAIEEYARRDRRFGAVK 250
>gi|262372665|ref|ZP_06065944.1| di-trans,poly-cis-decaprenylcistransferase [Acinetobacter junii
SH205]
gi|262312690|gb|EEY93775.1| di-trans,poly-cis-decaprenylcistransferase [Acinetobacter junii
SH205]
Length = 249
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 90/233 (38%), Positives = 138/233 (59%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IIMDGN R+A L + GHR+G V + IV VG++ LT+FAFS NW
Sbjct: 9 LPKHVAIIMDGNNRFAKKNKLQKGDGHREGKNVLDPIVEHCKRVGVQALTVFAFSSENWN 68
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ L+KL++ + + ++K NI +R IG+R L +++ ++ AE +T
Sbjct: 69 RPQFEVDLLMKLLEDTIHEQLPRMEKFNIALRFIGDRSKLSNELKDLMLYAEQKTASFNS 128
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ L IA +Y +++ A K I QD+ G V ++ L KY+ +D+P DL+IRTG
Sbjct: 129 MTLTIAISYGGMWDMAHAAKCIAQDVVDGKVQVDQINVDLFDKYVSLNDLPAVDLLIRTG 188
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
G+ RLS+FLLWQ AY+E F WP+F+ + A + ++ R+RRFG S++
Sbjct: 189 GDYRLSNFLLWQAAYAELYFTDTLWPEFTVKELDCAFDVFSGRERRFGKTSEQ 241
>gi|291530446|emb|CBK96031.1| Undecaprenyl pyrophosphate synthetase [Eubacterium siraeum 70/3]
gi|291557941|emb|CBL35058.1| Undecaprenyl pyrophosphate synthetase [Eubacterium siraeum V10Sc8a]
Length = 221
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 94/222 (42%), Positives = 134/222 (60%), Gaps = 1/222 (0%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA RGLPR AGH +G +VF V ++GIK T +AFS NW+RP E+
Sbjct: 1 MDGNGRWAKKRGLPRKAGHSQGAKVFRRTVEDCRDIGIKYCTFYAFSTENWKRPKDEVDA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
++KL+ +L S+ + N ++ +G++ + DDDI L E E+ ++ N GL + +A N
Sbjct: 61 IMKLLVKYLD-DIRSMAQKNTRIIFLGDKSAFDDDIQARLVEIEEISKNNDGLYVLVALN 119
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y +DEI A K + +D + G V YL T +P DLIIR GE+R S+F
Sbjct: 120 YGGKDEILTAAKRLARDYKEGKVDLDGFTEDDFDNYLYTKGIPPVDLIIRPSGEQRTSNF 179
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
L+WQ AY+E +F+ WPDFS++ A ++Y R+RRFGGL
Sbjct: 180 LIWQGAYAELLFMDVLWPDFSKKDLIAACDEYARRNRRFGGL 221
>gi|103487440|ref|YP_617001.1| undecaprenyl diphosphate synthase [Sphingopyxis alaskensis RB2256]
gi|98977517|gb|ABF53668.1| Undecaprenyl pyrophosphate synthetase [Sphingopyxis alaskensis
RB2256]
Length = 228
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 97/228 (42%), Positives = 143/228 (62%), Gaps = 8/228 (3%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA R LPR AGHR G+E IV AA ++G++ +T++AFS NW+RP
Sbjct: 9 RHVAIIMDGNGRWAKKRMLPRVAGHRAGVETVRTIVRAAGDLGLEAMTLYAFSSENWKRP 68
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E+++L+ L+K F+ N++K++VIGN +L D++ ++ A D+T N
Sbjct: 69 EEEVNDLMGLMKRFILSDLDEFAANDVKLKVIGNWRALAPDVVALIDNALDRTSGNKRTT 128
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L +A NY ++DE+ R + + ++ + I +LDT+D+P DL+IRT GE
Sbjct: 129 LAVALNYGAQDELVR--------AANAAAAIGEITAEAIEAHLDTADMPPLDLLIRTSGE 180
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLS+FLLWQ AY+E F + WPDF+ AL+Q+ RDRR+GGL
Sbjct: 181 LRLSNFLLWQSAYAELYFTEKLWPDFTPADLKAALDQFARRDRRYGGL 228
>gi|294666398|ref|ZP_06731644.1| undecaprenyl pyrophosphate synthetase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292603840|gb|EFF47245.1| undecaprenyl pyrophosphate synthetase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 253
Score = 265 bits (678), Expect = 4e-69, Method: Composition-based stats.
Identities = 93/236 (39%), Positives = 136/236 (57%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+++ P HI IIMDGNGRWA R PR GHR G N + E G+ LT+FAFS
Sbjct: 7 AANVPRHIAIIMDGNGRWAQRRRRPRVIGHRAGARAVNRTIDFCLEKGVSALTLFAFSSE 66
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP E+ L+KL L + L++ ++VR IG+R + + AE T
Sbjct: 67 NWGRPQDEVDALMKLFLHALDREVEELQRRGVQVRFIGDRSRFAAPLRDRMAGAERSTAA 126
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N+ L L IA +Y R +I+ A + + +D+ +G + +D +L++ + +D+P PDL I
Sbjct: 127 NSRLVLSIAASYGGRQDIAAAARALAEDVAAGRLQPEQIDEALLSSRVALADLPAPDLFI 186
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGG+ R+S+FLLWQ+AY+E F WP+F + AL+ Y R+RRFG S +
Sbjct: 187 RTGGDTRISNFLLWQLAYTELWFTETLWPEFDAGVLQQALDDYAGRERRFGLTSAQ 242
>gi|16752472|ref|NP_444734.1| hypothetical protein CP0183 [Chlamydophila pneumoniae AR39]
gi|7189113|gb|AAF38056.1| undecaprenyl pyrophosphate synthetase [Chlamydophila pneumoniae
AR39]
gi|269303444|gb|ACZ33544.1| undecaprenyl diphosphate synthase [Chlamydophila pneumoniae LPCoLN]
Length = 261
Score = 265 bits (678), Expect = 4e-69, Method: Composition-based stats.
Identities = 95/235 (40%), Positives = 130/235 (55%), Gaps = 4/235 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAAR----GLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
P+H+ IIMDGN RW G +GH G +V I+ A ++GIK LT++ F
Sbjct: 27 QRLPNHVAIIMDGNRRWYKKHREECGHTHTSGHYYGAKVLPNILNAVLDLGIKVLTLYTF 86
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S N+ RP EI E+ + + L K L +N I +R IG+ L I +
Sbjct: 87 STENFGRPKEEIQEIFNIFYTQLDKQLPYLMENEICLRCIGDLSKLPKGIQTKINHVSRM 146
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T + L L +A NY +DE+ RA K + DI + + S D+ SLI+ YLDTS + DPD
Sbjct: 147 TASFSRLELVLAVNYGGKDELVRAFKKLHVDILNKKISSDDLSESLISSYLDTSGLTDPD 206
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L+IRTGGE R+S+FLLWQ+AY+E WPDF+ + F A+N Y R RR G
Sbjct: 207 LLIRTGGEMRVSNFLLWQIAYTELYITDTLWPDFTPQDLFEAINVYQQRSRRGGK 261
>gi|150401559|ref|YP_001325325.1| undecaprenyl diphosphate synthase [Methanococcus aeolicus Nankai-3]
gi|150014262|gb|ABR56713.1| undecaprenyl diphosphate synthase [Methanococcus aeolicus Nankai-3]
Length = 263
Score = 265 bits (678), Expect = 4e-69, Method: Composition-based stats.
Identities = 79/242 (32%), Positives = 123/242 (50%), Gaps = 4/242 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + P HIG+IMDGN R G GH+ G + E V +G+K +T+
Sbjct: 22 LERKLDKKNIPKHIGVIMDGNRRMTKTIGSKSMIGHKIGAKKSLEFVDWCVNLGVKVITL 81
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVLK 118
++FS N+ R E+ L+ L + + K I+++ IG L + + +
Sbjct: 82 YSFSQENFNRSKEEVDFLMDLFEQEFMATADDSMVHKKKIRIKAIGRVDLLPERVRKAID 141
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
AE++T+ + +A Y + EI AIK+I I++ + D+ + I++ L TS
Sbjct: 142 YAEERTKDYNNYYVNVAIAYGGQQEIVDAIKDIAYKIKNNELNVEDISVNTISERLYTSH 201
Query: 179 VPDP--DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
+P P DLIIRT GE+R+S+FL WQ YSE F YWP F + F A+ Y R RR+
Sbjct: 202 LPHPNPDLIIRTSGEERISNFLTWQSIYSELYFCEVYWPQFRKIDFLRAIRDYQKRKRRY 261
Query: 237 GG 238
G
Sbjct: 262 GK 263
>gi|260890535|ref|ZP_05901798.1| hypothetical protein GCWU000323_01713 [Leptotrichia hofstadii
F0254]
gi|260859777|gb|EEX74277.1| undecaprenyl diphosphate synthase [Leptotrichia hofstadii F0254]
Length = 269
Score = 265 bits (678), Expect = 4e-69, Method: Composition-based stats.
Identities = 92/262 (35%), Positives = 136/262 (51%), Gaps = 29/262 (11%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI IIMDGNGRWA RG R GHR G +I+ A ++G+K LT++AFS NW+
Sbjct: 8 IPGHIAIIMDGNGRWAKERGKIRLEGHRAGANSLEKILKYAGDIGVKYLTVYAFSTENWK 67
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ L+ L +L K +LKK +++ V G++ ++ +L ++E E+
Sbjct: 68 RPEKEVKGLMDLFAKYLDKEKKNLKKQGVRLLVTGSKENISQKLLKKIEETENYLADCNK 127
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQ-----------------------------DIESGSV 160
+ IAFNY R EI A+ + + +
Sbjct: 128 IIFNIAFNYGGRREIIDAVNKVLHTKLSSESNVTVKEQLNNENKGSNVLEKVVNGFANKK 187
Query: 161 CSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRE 220
+ + +K++ ++PDP+L+IRT GE R+S+FLLW+VAYSEF YWPDF
Sbjct: 188 ENLKITEEEFSKFMYRPEIPDPELVIRTSGEFRISNFLLWEVAYSEFYITDVYWPDFDEN 247
Query: 221 LFFHALNQYNLRDRRFGGLSKK 242
A+ +N RDRR+GGL+ K
Sbjct: 248 ELDKAILSFNKRDRRYGGLNVK 269
>gi|218283541|ref|ZP_03489531.1| hypothetical protein EUBIFOR_02121 [Eubacterium biforme DSM 3989]
gi|218215809|gb|EEC89347.1| hypothetical protein EUBIFOR_02121 [Eubacterium biforme DSM 3989]
Length = 246
Score = 265 bits (678), Expect = 4e-69, Method: Composition-based stats.
Identities = 99/230 (43%), Positives = 136/230 (59%), Gaps = 3/230 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P + IIMDGNGRWA RGLPR AGH+KG + + AA ++GI+ L ++AFS NW+R
Sbjct: 19 PKTVAIIMDGNGRWAKQRGLPRTAGHKKGADTIRTVALAAQDMGIQKLILYAFSTENWKR 78
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+S L KL F K L + NI+V G V+ +A + T NTGL
Sbjct: 79 PEDEVSYLCKLPGLFFNKFINELMEKNIQVTFAGELEKFPKATQDVINKAVNMTSKNTGL 138
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY SR E+ +IK ++ SG +D+ +KYL + D DL+IRT G
Sbjct: 139 ELCLAINYGSRREMLLSIKKYADEVASGKR-ENDLTEEEFSKYLFVPE--DIDLMIRTSG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E R+S++LLWQ+AY+E +F P WPDF + L+++ RDRRFGGL+
Sbjct: 196 ELRISNYLLWQLAYAELIFTPVAWPDFDEKALKDCLDEFASRDRRFGGLT 245
>gi|254428041|ref|ZP_05041748.1| undecaprenyl diphosphate synthase [Alcanivorax sp. DG881]
gi|196194210|gb|EDX89169.1| undecaprenyl diphosphate synthase [Alcanivorax sp. DG881]
Length = 260
Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats.
Identities = 94/236 (39%), Positives = 137/236 (58%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S P H+ IIMDGN RWA +GLP GHR G I+ AA GI+ LT+FAFS
Sbjct: 17 QGSVPRHVAIIMDGNNRWARKQGLPGEEGHRAGEATVQAIIRQAAHQGIEALTLFAFSSE 76
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP +E+ L+ L L L + +++R IG+R + D+ + EAE T
Sbjct: 77 NWRRPQAEVDHLMALFLKALGGRVEELHGHGVRIRFIGDRSAFAADLQDGMAEAESLTGA 136
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N + + IA NY + +I+ A + + + + +G + + + +A +L +D+P PDL+I
Sbjct: 137 NNRMTVVIAVNYGGQWDIAHAARIMAEKVAAGEIQPEQISAESMAPHLSMADLPPPDLLI 196
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGG++R+S+FLLWQ+AYSE F P WPDF + F AL + R RRFG ++
Sbjct: 197 RTGGDQRISNFLLWQLAYSELYFSPLLWPDFDADAFDAALQDFAGRQRRFGRSGEE 252
>gi|107103166|ref|ZP_01367084.1| hypothetical protein PaerPA_01004235 [Pseudomonas aeruginosa PACS2]
gi|313109057|ref|ZP_07795029.1| undecaprenyl pyrophosphate synthetase [Pseudomonas aeruginosa
39016]
gi|310881531|gb|EFQ40125.1| undecaprenyl pyrophosphate synthetase [Pseudomonas aeruginosa
39016]
Length = 234
Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats.
Identities = 90/225 (40%), Positives = 137/225 (60%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGN RWA R LP AGH+ G++ ++ AE G++ LT+FAFS NW+RP E+S
Sbjct: 1 MDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAEAGVEVLTLFAFSSENWQRPADEVSA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L L++ L +N I++R+IG+R ++ ++EAE T NT L +A N
Sbjct: 61 LMELFLVALRREVRKLDENGIRLRIIGDRTRFHPELQAAMREAEAATAGNTRFLLQVAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y + +I +A + + ++++ G + + D+ + L+ L T D P PDL IRTGGE R+S+F
Sbjct: 121 YGGQWDIVQAAQRLAREVQGGHLAADDISAELLQGCLVTGDQPLPDLCIRTGGEHRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
LLWQ+AY+E F +WPDF AL ++ R RRFG S++
Sbjct: 181 LLWQLAYAELYFSDLFWPDFKHAAMRAALADFSKRQRRFGKTSEQ 225
>gi|307214675|gb|EFN89604.1| Dehydrodolichyl diphosphate synthase [Harpegnathos saltator]
Length = 304
Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats.
Identities = 82/234 (35%), Positives = 132/234 (56%), Gaps = 3/234 (1%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ M + P H+ IMDGN R+A + + + GH KG + E ++ ++GI +T++
Sbjct: 17 LKIMRTGHVPKHVAFIMDGNRRYANKKHVAKVEGHTKGFDKLAETLSWCMDLGITEVTVY 76
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLK 118
AFSI N++R E+ L++L K ++ L + I VR+IGN + +DI ++
Sbjct: 77 AFSIENFKRNKEEVDALMELAKQKFERLLEEKDKLMERGICVRIIGNLSLIPEDICKLIA 136
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
+ T+ N L +AF Y+SRDEI+ AIK+I + ++ + D++ LI+ L T +
Sbjct: 137 KIMTITKDNNKAFLNVAFAYTSRDEITCAIKDIVKGVKHNEIVPEDINEDLISNCLYTYN 196
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLR 232
PDPDL+IRT GE RLSDFL+WQ++ + F WP+F+ F A+ Y
Sbjct: 197 SPDPDLLIRTSGEVRLSDFLMWQISDTCVYFANVLWPEFTIWDFLSAIFYYQRC 250
>gi|309810997|ref|ZP_07704795.1| di-trans,poly-cis-decaprenylcistransferase [Dermacoccus sp.
Ellin185]
gi|308434961|gb|EFP58795.1| di-trans,poly-cis-decaprenylcistransferase [Dermacoccus sp.
Ellin185]
Length = 301
Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats.
Identities = 86/235 (36%), Positives = 135/235 (57%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ + P HI ++MDGNGRWA RGLPR GH G + ++VA E+G+KN++ +AF
Sbjct: 16 AIPAELVPQHIAMVMDGNGRWANERGLPRTKGHEAGEAMLIDVVAGCIELGVKNISAYAF 75
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRR E+ L+ + +++ L ++V G + L ++ L+ A+++
Sbjct: 76 STENWRRSPEEVRFLMGFNRDTIRRRVDLLDSWGVRVIWSGRKPRLWRSVVRELEVAQER 135
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NT L + NY R E+ A +++ D+ +G + + I YL D+PD D
Sbjct: 136 TKNNTVCTLQMCVNYGGRAELVDATRSLADDVAAGRLNPKKITEKTIQSYLYAPDLPDVD 195
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R+ GE+R S+F LWQ AY+E VF+ WPDF R + A++ Y RDRR+GG
Sbjct: 196 LFVRSSGEQRTSNFQLWQSAYAEMVFLDTLWPDFDRRKLWEAVDIYARRDRRYGG 250
>gi|19553481|ref|NP_601483.1| undecaprenyl pyrophosphate synthase [Corynebacterium glutamicum
ATCC 13032]
gi|62391124|ref|YP_226526.1| undecaprenyl pyrophosphate synthase [Corynebacterium glutamicum
ATCC 13032]
gi|145296237|ref|YP_001139058.1| undecaprenyl pyrophosphate synthase [Corynebacterium glutamicum R]
gi|42559992|sp|Q8NNC1|UPPS2_CORGL RecName: Full=Undecaprenyl pyrophosphate synthase 2; Short=UPP
synthase 2; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase 2;
AltName: Full=Undecaprenyl diphosphate synthase 2;
Short=UDS 2
gi|21325054|dbj|BAB99676.1| Undecaprenyl pyrophosphate synthase [Corynebacterium glutamicum
ATCC 13032]
gi|41326463|emb|CAF20625.1| PUTATIVE UNDECAPRENYL DIPHOSPHATE SYNTHASE [Corynebacterium
glutamicum ATCC 13032]
gi|140846157|dbj|BAF55156.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 243
Score = 265 bits (677), Expect = 5e-69, Method: Composition-based stats.
Identities = 88/236 (37%), Positives = 136/236 (57%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
V + + P HI ++MDGNGRWA RG+ R GH++G V ++V A E+G+ L+ +
Sbjct: 6 VPEIPAQFLPKHIALVMDGNGRWATERGMKRTEGHKRGEAVLLDVVDACIELGVPYLSAY 65
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRR E+ L+ + L++ L + ++VR +G R L ++ L+ AE
Sbjct: 66 AFSTENWRRSTDEVRFLMGFNRDVLRRQRDDLHEKGVRVRWVGRRPRLWRSVIRELETAE 125
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ T+ NT + L + NY R EI A ++I + G + + +LD D+PD
Sbjct: 126 ELTKDNTTMTLAMCVNYGGRAEIIDAARDIARLAAEGKLRPEQITEKTFPNFLDEPDMPD 185
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL +R GEKR S+FLLWQ AY+E V+ + +PDF+++ + A+ +Y RDRRFG
Sbjct: 186 VDLFLRPSGEKRTSNFLLWQSAYAEMVYQDKLFPDFTQQDLYDAVLEYAKRDRRFG 241
>gi|329850620|ref|ZP_08265465.1| di-trans,poly-cis-decaprenylcistransferase [Asticcacaulis
biprosthecum C19]
gi|328840935|gb|EGF90506.1| di-trans,poly-cis-decaprenylcistransferase [Asticcacaulis
biprosthecum C19]
Length = 253
Score = 265 bits (677), Expect = 5e-69, Method: Composition-based stats.
Identities = 91/229 (39%), Positives = 143/229 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG R GH+ G++ + AA ++G+ ++T+FAFS NWRR
Sbjct: 16 PFHVAIIMDGNGRWAKERGQIRTIGHKAGVDALKRTITAAVDLGVTHMTVFAFSTENWRR 75
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E+S+L+ L+++F+K L++ + VR+IG L DI+ ++ +A +QT+ N+
Sbjct: 76 PEAEVSDLMGLLRAFIKADLARLRREGVCVRIIGQEDGLPRDIVGMVADAHEQTKHNSRF 135
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A NY ++ +I A + + Q G++ + + + A L T +P DL+IRT G
Sbjct: 136 FLQVALNYGAQADIVEAARRLAQSARDGAITPESITADIFANSLSTHGLPPLDLLIRTSG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E RLS+FLLW+ AY+EFVF WPD+ + AL+ + R+RRFG +
Sbjct: 196 EHRLSNFLLWEAAYAEFVFQDILWPDYGHDALKQALDIFARRNRRFGAV 244
>gi|300858143|ref|YP_003783126.1| hypothetical protein cpfrc_00725 [Corynebacterium
pseudotuberculosis FRC41]
gi|300685597|gb|ADK28519.1| hypothetical protein cpfrc_00725 [Corynebacterium
pseudotuberculosis FRC41]
gi|302205864|gb|ADL10206.1| Putative undecaprenyl pyrophosphate synthetase [Corynebacterium
pseudotuberculosis C231]
gi|302330422|gb|ADL20616.1| Putative undecaprenyl pyrophosphate synthetase [Corynebacterium
pseudotuberculosis 1002]
gi|308276099|gb|ADO25998.1| Putative undecaprenyl pyrophosphate synthetase [Corynebacterium
pseudotuberculosis I19]
Length = 265
Score = 265 bits (677), Expect = 5e-69, Method: Composition-based stats.
Identities = 80/243 (32%), Positives = 124/243 (51%), Gaps = 7/243 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGL-PRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
++ + + P H+ I+ DGN RWA G GHR G + E+V + ++ +T
Sbjct: 25 LLREIAGAKQPSHVAIMCDGNRRWAREAGFADVTHGHRVGAKKVGEMVRWCKDTDVELVT 84
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++ S N R E+ L +I + + + + N ++R++G+ L ++ +
Sbjct: 85 VYLLSTENLGRASDELDMLFDIIGDVVDEL--AAPETNCRLRLVGHLDLLPPEVAERMNY 142
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLD 175
A+++T NTG+ + +A Y R EI A++ + + I+K+L
Sbjct: 143 AQEKTAHNTGVAVNVAVGYGGRQEIVDAVRELISGEVESGTEPEKIADKVTVESISKHLY 202
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
TS PDPDL+IRT GE+RLS FLLWQ AYSE F YWP F R F AL +Y+ R RR
Sbjct: 203 TSGQPDPDLVIRTSGEQRLSGFLLWQAAYSEIWFTDTYWPAFRRVDFLRALREYSKRSRR 262
Query: 236 FGG 238
FG
Sbjct: 263 FGK 265
>gi|283777899|ref|YP_003368654.1| undecaprenyl diphosphate synthase [Pirellula staleyi DSM 6068]
gi|283436352|gb|ADB14794.1| undecaprenyl diphosphate synthase [Pirellula staleyi DSM 6068]
Length = 251
Score = 265 bits (677), Expect = 5e-69, Method: Composition-based stats.
Identities = 87/239 (36%), Positives = 144/239 (60%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+A + + P H+ +IMDGNGRWA R LPR GHR+G+ V A +G+ L+++
Sbjct: 12 LADVPLARRPRHVAVIMDGNGRWAQRRDLPRIEGHRRGVASVRRTVEEGARLGLTQLSLY 71
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
S NW+RP E+ L+ L++ ++ + ++ + NI V VIG R + + L +
Sbjct: 72 CLSSENWKRPQRELDFLMHLLEQYMIEERTTIMQQNITVSVIGRREGIPEATLAEMDRTV 131
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ + NTG+ L +A NY +R E+ A++ I +++ G + +D +L++ L T+ +PD
Sbjct: 132 EMSAANTGMRLCLAINYGARGELVDAVRAIAAEVQQGKLDPATIDEALVSSKLYTAGMPD 191
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
PDL+IRT GE R+S+FLLWQ++Y+E + WP+F + F ++ + RDRRFGGL+
Sbjct: 192 PDLLIRTAGEMRISNFLLWQISYAELWVTEKCWPEFELDDFHQSIRSFAARDRRFGGLA 250
>gi|238751446|ref|ZP_04612938.1| Di-trans,poly-cis-decaprenylcistransferase [Yersinia rohdei ATCC
43380]
gi|238710313|gb|EEQ02539.1| Di-trans,poly-cis-decaprenylcistransferase [Yersinia rohdei ATCC
43380]
Length = 230
Score = 265 bits (677), Expect = 5e-69, Method: Composition-based stats.
Identities = 86/223 (38%), Positives = 131/223 (58%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA +G R GHR G++ V+ AA + LT++AFS NW RP E+S
Sbjct: 1 MDGNGRWAKKQGKLRVFGHRAGVKSVRRAVSFAANNQLDALTLYAFSSENWNRPAQEVSA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L L SL K+N+++ VIG+ + + ++ +E+ T N GL L IA N
Sbjct: 61 LMELFVRALDSEVKSLHKHNVRLSVIGDISRFSERLQQRIRRSEELTANNDGLKLNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I + ++++ + ++ G + D+ + Y+ + + DL+IRTGGE R+S+F
Sbjct: 121 YGGRWDIIQGVRHLAEQVQRGELQPADISEEALNSYICLHEQSEVDLVIRTGGEHRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LLWQ+AY+E F WPDF +F ALN + R+RRFGG +
Sbjct: 181 LLWQIAYAELYFTDVLWPDFDEHVFEGALNAFAQRERRFGGTT 223
>gi|296130028|ref|YP_003637278.1| undecaprenyl diphosphate synthase [Cellulomonas flavigena DSM
20109]
gi|296021843|gb|ADG75079.1| undecaprenyl diphosphate synthase [Cellulomonas flavigena DSM
20109]
Length = 261
Score = 265 bits (677), Expect = 5e-69, Method: Composition-based stats.
Identities = 93/229 (40%), Positives = 138/229 (60%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ ++MDGNGRWA ARGLPR GHR G ++VA A EVG+++++ +AFS NW+
Sbjct: 25 VPKHVAVVMDGNGRWANARGLPRVEGHRAGESSLLDVVAGAIEVGVQHVSAYAFSTENWK 84
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ L+ + L++ + ++VR G R L ++ L+EAE TR NT
Sbjct: 85 RSPDEVRFLMGFNRDVLRRRRDLMHSWGVRVRWAGRRPRLWRSVVAELEEAERLTRHNTT 144
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L + NY R EI+ A K I +++ +G + V + ++LD D+PD DL +R+
Sbjct: 145 CTLTMCVNYGGRAEIADAAKQIAREVAAGRLDPEKVTERTVQRHLDEPDLPDVDLFVRSS 204
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GE+R+S+F+LWQ AY+E VF+ E WPD R + A+ Y RDRR+GG
Sbjct: 205 GEQRISNFMLWQSAYAEMVFLDEPWPDVDRRHLWRAVETYARRDRRYGG 253
>gi|108804239|ref|YP_644176.1| undecaprenyl pyrophosphate synthetase [Rubrobacter xylanophilus DSM
9941]
gi|108765482|gb|ABG04364.1| Undecaprenyl pyrophosphate synthetase [Rubrobacter xylanophilus DSM
9941]
Length = 222
Score = 265 bits (677), Expect = 5e-69, Method: Composition-based stats.
Identities = 98/225 (43%), Positives = 137/225 (60%), Gaps = 4/225 (1%)
Query: 15 GIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSE 74
GIIMDGNGRWA RGLPR AGHR G+ V ++ A E+GI++LT++AFS NW RP E
Sbjct: 2 GIIMDGNGRWARRRGLPRAAGHRAGVSVLTPVLETAGELGIESLTLYAFSTENWSRPAEE 61
Query: 75 ISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFI 134
+ L+ L ++ +K+ +VR +G R L +L ++EAE+ T N L ++I
Sbjct: 62 VDTLMSLFLETARRKLPEIKERGARVRFVGRREHLPKPVLRAMREAEELTAENDRLRVYI 121
Query: 135 AFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRL 194
A NY R EI A + + + + +VD A+YL +VPD DL+IRT GE R+
Sbjct: 122 ALNYGGRSEIVDAARRMLAE----GLSPEEVDERTFARYLYAPEVPDLDLLIRTSGEMRV 177
Query: 195 SDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
S+FLLWQ+AY+E +WPDFSRE F A+ + R RR+GG+
Sbjct: 178 SNFLLWQIAYAELYVTETFWPDFSREEFLKAIEDFASRSRRWGGV 222
>gi|238792750|ref|ZP_04636381.1| Di-trans,poly-cis-decaprenylcistransferase [Yersinia intermedia
ATCC 29909]
gi|238727858|gb|EEQ19381.1| Di-trans,poly-cis-decaprenylcistransferase [Yersinia intermedia
ATCC 29909]
Length = 230
Score = 265 bits (677), Expect = 5e-69, Method: Composition-based stats.
Identities = 84/223 (37%), Positives = 129/223 (57%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA RG R GH+ G++ V+ AA + LT++AFS NW RP E++
Sbjct: 1 MDGNGRWAKNRGKLRVFGHKAGVKSVRRAVSFAANHHLDALTLYAFSSENWNRPAQEVTA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L L SL K+N+++ VIG+ + + ++ +E T N GL L IA N
Sbjct: 61 LMELFVRALDSEVKSLHKHNVRLSVIGDISRFSERLQQRIRRSEALTANNDGLKLNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I + ++ + + ++ G + D+ + ++ + + DL+IRTGGE R+S+F
Sbjct: 121 YGGRWDIIQGVRQLAEQVQQGELQPTDICEESLNSHICLHEQSEVDLVIRTGGEHRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LLWQ+AY+E F WPDF +F ALN + R+RRFGG +
Sbjct: 181 LLWQIAYAELYFTDVLWPDFDEHVFEGALNAFAQRERRFGGTT 223
>gi|149197638|ref|ZP_01874688.1| undecaprenyl pyrophosphate synthase [Lentisphaera araneosa
HTCC2155]
gi|149139208|gb|EDM27611.1| undecaprenyl pyrophosphate synthase [Lentisphaera araneosa
HTCC2155]
Length = 230
Score = 265 bits (677), Expect = 5e-69, Method: Composition-based stats.
Identities = 96/230 (41%), Positives = 138/230 (60%), Gaps = 4/230 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P HI IIMDGNGRWAA RGL R GH G+ V A + G+K LT++ FS NW
Sbjct: 4 SVPKHIAIIMDGNGRWAAERGLDRIEGHTAGVSAVLRTVDACLKKGVKYLTLYTFSTENW 63
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+R E+S L+ L+ L K + IK+ +G+ +L ++ L+E ++T+ N
Sbjct: 64 KRSEEEVSALMMLLGEALSKYLPDFMEKGIKLATVGDVKALPKEVCAKLEEVREKTKENN 123
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+ +A NY RDE+ R + + + S ++ + YLD++ +PDP+L+IRT
Sbjct: 124 QIVFNLALNYGGRDELIRTCRRVM----DAGIKSDELTEEIFETYLDSAGMPDPELLIRT 179
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GE R+S+FLLWQ++YSEFV +PE+WPDF EL AL +N R+RRFGG
Sbjct: 180 SGEMRISNFLLWQISYSEFVCMPEFWPDFGPELLDKALEDFNARERRFGG 229
>gi|257455345|ref|ZP_05620580.1| di-trans,poly-cis-decaprenylcistransferase [Enhydrobacter
aerosaccus SK60]
gi|257447307|gb|EEV22315.1| di-trans,poly-cis-decaprenylcistransferase [Enhydrobacter
aerosaccus SK60]
Length = 246
Score = 265 bits (677), Expect = 5e-69, Method: Composition-based stats.
Identities = 87/236 (36%), Positives = 144/236 (61%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
++ P HI IIMDGN R+A A GLP GH G + + +V ++GI+ LT+FAFS
Sbjct: 5 KAAMPQHIAIIMDGNNRYAKAHGLPSGGGHIAGKDNLDPLVEHCMDIGIRALTVFAFSSE 64
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW+RP SE++ L+KL++ + + ++ I +R IG+R +L + ++++AE+QT
Sbjct: 65 NWQRPASEVALLMKLLEQTVHDQLPRMLRHQISLRFIGDRGALTPHLRAIMQDAEEQTAH 124
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
T ++L IA +Y + +I A + + + +E G++ + + A++L SD+P D++I
Sbjct: 125 FTKMSLVIAISYGGQWDIVNACRQVAKQVEEGALTADAITQDDFARHLSLSDLPAVDMLI 184
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGG+ R+S+FLLWQ AY+E F WPDF ++ + R+RRFG S++
Sbjct: 185 RTGGDYRISNFLLWQCAYAELFFTETLWPDFKAAELDQMIDIFMGRERRFGKTSEQ 240
>gi|111018234|ref|YP_701206.1| di-trans,poly-cis-decaprenylcistransferase [Rhodococcus jostii
RHA1]
gi|110817764|gb|ABG93048.1| di-trans,poly-cis-decaprenylcistransferase [Rhodococcus jostii
RHA1]
Length = 231
Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats.
Identities = 90/231 (38%), Positives = 138/231 (59%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI ++MDGNGRWA RGLPR AGH +G V + V E+G++ L+ +AFS NW+
Sbjct: 1 MPRHIALVMDGNGRWAQERGLPRTAGHERGEAVLMDAVCGCIEMGVEWLSAYAFSTENWK 60
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ L+ + +++ + + ++VR G R L ++ L+ AE+ T+ NT
Sbjct: 61 RSPEEVRFLMGFNRDVIRRRRDEMHEMGVRVRWAGRRPKLWRSVIKELEIAEELTKHNTV 120
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+NL + NY R EI+ A K I + + +G + + + +A+YLD D+PD DL +R
Sbjct: 121 MNLTMCVNYGGRAEIADAAKEIGRRVAAGQLDPEKITEATVARYLDEPDMPDVDLFLRPS 180
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
GE+R S+FL+WQ AY+E V+ + +PDF R + A +Y RDRRFGG+
Sbjct: 181 GEQRTSNFLIWQSAYAEMVYQEKLFPDFDRRDLWAACVEYASRDRRFGGVK 231
>gi|289662903|ref|ZP_06484484.1| undecaprenyl pyrophosphate synthase [Xanthomonas campestris pv.
vasculorum NCPPB702]
Length = 253
Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats.
Identities = 93/236 (39%), Positives = 135/236 (57%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
++ P HI IIMDGNGRWA R PR GHR G N + E G+ LT+FAFS
Sbjct: 7 AADVPRHIAIIMDGNGRWAQRRRRPRVIGHRAGARAVNRTIDFCLEKGVSALTLFAFSSE 66
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP E+ L+KL L + L++ ++VR IG+R + + AE T
Sbjct: 67 NWGRPQDEVDALMKLFLHVLDREVEELQRRGVQVRFIGDRSRFAAPLRDRMAGAERSTAA 126
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N+ L L IA +Y R +I+ A + + +D+ +G + +D +L++ + +D+P PDL I
Sbjct: 127 NSRLVLSIAASYGGRQDIAAAARALAEDVAAGRLQPEQIDEALLSSRVALADLPAPDLFI 186
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGG+ R+S+FLLWQ+AY+E F WP+F + AL+ Y R+RRFG S +
Sbjct: 187 RTGGDTRISNFLLWQLAYTELWFTETLWPEFDAGVLQQALDDYAGRERRFGLTSAQ 242
>gi|324998274|ref|ZP_08119386.1| putative undecaprenyl pyrophosphate synthetase [Pseudonocardia sp.
P1]
Length = 259
Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats.
Identities = 86/235 (36%), Positives = 139/235 (59%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ P H+ ++MDGNGRWA ARGLPR GH++G ++ ++G+ L+ +AF
Sbjct: 17 AIPPELVPRHVALVMDGNGRWANARGLPRTEGHKRGEASLMDVARGCIDIGVTWLSAYAF 76
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRR E+ L+ + +++ + + ++VR G R L ++ L+ AE++
Sbjct: 77 STENWRRSPDEVRFLMGFNRDVIRRRVDEMHEMGVRVRWAGRRPRLWRSVIKELEVAEER 136
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N LNL + NY R EI +++++ + G + +D ++A++LD D+PD D
Sbjct: 137 TKHNDVLNLTMCVNYGGRAEIVDSVRHLARLAAEGKIKPDKIDERMLARHLDEPDMPDVD 196
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R+ GE+R S+FLLWQ AY+E VF+ +PDF R + A+ Y RDRRFGG
Sbjct: 197 LFVRSSGEQRTSNFLLWQSAYAEMVFLDTPFPDFDRRHIWEAIEIYARRDRRFGG 251
>gi|15618477|ref|NP_224762.1| hypothetical protein CPn0566 [Chlamydophila pneumoniae CWL029]
gi|15836097|ref|NP_300621.1| hypothetical protein CPj0566 [Chlamydophila pneumoniae J138]
gi|33241919|ref|NP_876860.1| hypothetical protein CpB0588 [Chlamydophila pneumoniae TW-183]
gi|13633997|sp|Q9Z7Y7|UPPS_CHLPN RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|4376859|gb|AAD18706.1| YaeS family hypothetical protein [Chlamydophila pneumoniae CWL029]
gi|8978937|dbj|BAA98772.1| YaeS family hypothetical protein [Chlamydophila pneumoniae J138]
gi|33236429|gb|AAP98517.1| hypothetical protein CpB0588 [Chlamydophila pneumoniae TW-183]
Length = 250
Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats.
Identities = 95/235 (40%), Positives = 130/235 (55%), Gaps = 4/235 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAAR----GLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
P+H+ IIMDGN RW G +GH G +V I+ A ++GIK LT++ F
Sbjct: 16 QRLPNHVAIIMDGNRRWYKKHREECGHTHTSGHYYGAKVLPNILNAVLDLGIKVLTLYTF 75
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S N+ RP EI E+ + + L K L +N I +R IG+ L I +
Sbjct: 76 STENFGRPKEEIQEIFNIFYTQLDKQLPYLMENEICLRCIGDLSKLPKGIQTKINHVSRM 135
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T + L L +A NY +DE+ RA K + DI + + S D+ SLI+ YLDTS + DPD
Sbjct: 136 TASFSRLELVLAVNYGGKDELVRAFKKLHVDILNKKISSDDLSESLISSYLDTSGLTDPD 195
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L+IRTGGE R+S+FLLWQ+AY+E WPDF+ + F A+N Y R RR G
Sbjct: 196 LLIRTGGEMRVSNFLLWQIAYTELYITDTLWPDFTPQDLFEAINVYQQRSRRGGK 250
>gi|84489974|ref|YP_448206.1| hypothetical protein Msp_1182 [Methanosphaera stadtmanae DSM 3091]
gi|84373293|gb|ABC57563.1| UppS [Methanosphaera stadtmanae DSM 3091]
Length = 255
Score = 264 bits (676), Expect = 6e-69, Method: Composition-based stats.
Identities = 75/241 (31%), Positives = 125/241 (51%), Gaps = 3/241 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARG-LPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ ++ + P+H+ IIMDGN R++ +G + GH+KG++ ++ ++GI +T
Sbjct: 15 ITRNLEADKMPNHVAIIMDGNRRYSKIQGNMDPIEGHKKGVDTLENVIEWCIDLGINIVT 74
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVL 117
++AFS N+ R E+ L+ L + KN I++ +G + +
Sbjct: 75 VYAFSTENFNRDKKEVEGLMDLFVQSFLNISTNKKIHKNKIRLNAVGKLELFPKKVRDAI 134
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
AE+ T+ + IA Y R EI A K I ++++ G++ +++ +I L T+
Sbjct: 135 DTAEESTKDYNERMINIAMGYDGRVEIVDAFKKIAREVQKGNIEPDEINEKMINDNLYTA 194
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+ DP+L+IRT GE+RLS FLLWQ +YSE F WP + F A+ Y R RRFG
Sbjct: 195 GLEDPNLVIRTSGEERLSGFLLWQSSYSELYFTDSLWPQLRKVDFLRAIRSYTQRQRRFG 254
Query: 238 G 238
Sbjct: 255 R 255
>gi|330817435|ref|YP_004361140.1| Di-trans-poly-cis-decaprenylcistransferase [Burkholderia gladioli
BSR3]
gi|327369828|gb|AEA61184.1| Di-trans-poly-cis-decaprenylcistransferase [Burkholderia gladioli
BSR3]
Length = 260
Score = 264 bits (676), Expect = 6e-69, Method: Composition-based stats.
Identities = 101/235 (42%), Positives = 142/235 (60%), Gaps = 1/235 (0%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
++ P HI IIMDGNGRWA R LPR AGH +G++ +V A G++ LT+FAFS N
Sbjct: 14 AAVPRHIAIIMDGNGRWATERRLPRVAGHTRGVDAVRSVVEGCARAGVEYLTLFAFSSEN 73
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRRP E+S L++L + L++ L N I++RV+G + I +++ AE +T N
Sbjct: 74 WRRPNDEVSFLMRLFITALEREVGKLHANGIRLRVVGELDRFEPRIRELIRRAETKTARN 133
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T L L IA NY R +I +A K + + VD + A++L + P+PDL IR
Sbjct: 134 TRLTLTIAANYGGRWDILQATKKLIAEAVREGREVE-VDETAFAQHLAMAYAPEPDLFIR 192
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE+R+S+FLLWQ+AY+EF F ++WPDF AL Y R+RRFG S +
Sbjct: 193 TGGEQRVSNFLLWQLAYTEFYFTGKFWPDFDAAALADALASYTDRERRFGRTSAQ 247
>gi|172041006|ref|YP_001800720.1| hypothetical protein cur_1326 [Corynebacterium urealyticum DSM
7109]
gi|171852310|emb|CAQ05286.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
Length = 252
Score = 264 bits (676), Expect = 6e-69, Method: Composition-based stats.
Identities = 90/239 (37%), Positives = 139/239 (58%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+AS+ + P HI ++MDGNGRWA RGL R GH++G V +V E+G++ L+ +
Sbjct: 14 IASLPTGLVPRHIALVMDGNGRWAQERGLARTEGHKRGESVLISLVEECLELGVEALSAY 73
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRR E+ L+ + L+K L +++R +G R L ++ L+ AE
Sbjct: 74 AFSTENWRRSAEEVRFLMGFNRDVLRKQRDYLDSLGVRIRWVGRRPRLWRSVISELERAE 133
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+QT+ NT + L++ NY R EI+ A K + + G + DV ++YLD D+PD
Sbjct: 134 EQTKHNTRMTLYMCINYGGRAEIADAAKALVAEANQGRIKPRDVSEKDFSRYLDEPDMPD 193
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL +R GE+R S+FL+WQ AY+E V+ +PD++ A+ ++ RDRRFGG+
Sbjct: 194 VDLFLRPSGEQRTSNFLIWQSAYAEMVYQQVLFPDYTPAHLRGAIWEFASRDRRFGGVK 252
>gi|38234283|ref|NP_940050.1| putative undecaprenyl phosphate synthetase [Corynebacterium
diphtheriae NCTC 13129]
gi|42559926|sp|P60481|UPPS2_CORDI RecName: Full=Undecaprenyl pyrophosphate synthase 2; Short=UPP
synthase 2; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase 2;
AltName: Full=Undecaprenyl diphosphate synthase 2;
Short=UDS 2
gi|38200546|emb|CAE50241.1| Putative undecaprenyl phosphate synthetase [Corynebacterium
diphtheriae]
Length = 245
Score = 264 bits (676), Expect = 6e-69, Method: Composition-based stats.
Identities = 91/237 (38%), Positives = 136/237 (57%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P HI ++MDGNGRWA RGL R GH++G V ++V A +GI L+ +AF
Sbjct: 9 QIPQEFLPRHIALVMDGNGRWATNRGLKRTEGHKRGEAVLLDMVDACIAMGIPYLSAYAF 68
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRR E+ L+ + L++ +L ++VR +G R L ++ L+ AE+
Sbjct: 69 STENWRRSTDEVRFLMGFNRDVLRRQRDALNAKGVRVRWVGRRPRLWRSVIRELEAAEEL 128
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NT + L + NY R EI A + I + G++ ++ ++LD D+PD D
Sbjct: 129 TKDNTTMTLAMCVNYGGRAEIVDAAREIARRSAVGTLRPEEITEDSFTQFLDEPDMPDVD 188
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
L +R GEKR S+FLLWQ AY+E V+ + +PD++ E F A+ +Y LRDRRFGG
Sbjct: 189 LFLRPSGEKRTSNFLLWQSAYAEMVYQNKLFPDYTPEDLFAAVEEYALRDRRFGGTK 245
>gi|320534190|ref|ZP_08034718.1| di-trans,poly-cis-decaprenylcistransferase [Actinomyces sp. oral
taxon 171 str. F0337]
gi|320133600|gb|EFW26020.1| di-trans,poly-cis-decaprenylcistransferase [Actinomyces sp. oral
taxon 171 str. F0337]
Length = 291
Score = 264 bits (676), Expect = 6e-69, Method: Composition-based stats.
Identities = 94/238 (39%), Positives = 139/238 (58%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ ++S P H+ ++MDGNGRWA ARGLPR GHR G ++ A A E+G+K L+++AFS
Sbjct: 28 LPAASLPQHVAVVMDGNGRWANARGLPRTEGHRVGEANMLDVAAGAIEIGVKELSVYAFS 87
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRR E+ ++ + L+ L N+++ +G L +L L+EAE T
Sbjct: 88 TENWRRSPGEVRFIMGFARKVLRVQRDVLNSWNVRLCWVGRTPRLWKSVLRELREAERVT 147
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
NTGL L + NY R EI+ A + I +D+ +G + + V+ I +YL + + D DL
Sbjct: 148 AHNTGLTLNLCINYGGRAEIADATRAIAEDVAAGRLKTSSVNEKTIQRYLYSPTMRDVDL 207
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTG E+R S+FL+W +Y+E F P WPDF+R + A Y R+RR+GG K
Sbjct: 208 FIRTGDEQRTSNFLMWSSSYAELYFSPLAWPDFNRTELWRACEAYAGRERRYGGAVDK 265
>gi|283782941|ref|YP_003373695.1| di-trans,poly-cis-decaprenylcistransferase [Gardnerella vaginalis
409-05]
gi|283441106|gb|ADB13572.1| di-trans,poly-cis-decaprenylcistransferase [Gardnerella vaginalis
409-05]
Length = 264
Score = 264 bits (675), Expect = 7e-69, Method: Composition-based stats.
Identities = 85/239 (35%), Positives = 142/239 (59%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ P H+G+IMDGNGRWA RG+ R GH+ V +++A A E G++ L+++
Sbjct: 24 IPDFPKGKVPRHVGVIMDGNGRWAKERGMIRTEGHKAAEPVVFDVIAGAIEAGVRYLSLY 83
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
FS NW+R E+ L+ + + + + + ++VR G R L ++ L++A+
Sbjct: 84 TFSTENWKRSPQEVRFLMGFSREIIHRRVAQMNEWGVRVRWAGRRPRLWKSVIDELEKAQ 143
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ T+ N +++ NY R EI+ A I ++I++G + V +IA++L D+PD
Sbjct: 144 EITKNNKTIDVVFCINYGGRAEIADACAQIAKEIQNGKIKGDRVSEKMIAEHLYNPDIPD 203
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRT GE+R S+FL WQ +Y+E F+PE +PD+ RE + ++++Y RDRRFGG+
Sbjct: 204 CDLVIRTSGEQRTSNFLPWQASYAELDFVPELFPDYGREALWRSIDRYAHRDRRFGGVK 262
>gi|238754802|ref|ZP_04616153.1| Di-trans,poly-cis-decaprenylcistransferase [Yersinia ruckeri ATCC
29473]
gi|238706962|gb|EEP99328.1| Di-trans,poly-cis-decaprenylcistransferase [Yersinia ruckeri ATCC
29473]
Length = 230
Score = 264 bits (675), Expect = 7e-69, Method: Composition-based stats.
Identities = 84/223 (37%), Positives = 129/223 (57%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA +G R GH+ G++ V+ AA + LT++AFS NW RP E++
Sbjct: 1 MDGNGRWAKRQGKLRIFGHKAGVKSVRRAVSFAATHHLDALTLYAFSSENWNRPAQEVTA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L L SL K+N+++ VIG+ + ++ +E+ T N GL L IA N
Sbjct: 61 LMELFVRALDSEVKSLHKHNVRLSVIGDISRFSKRLQDRIRRSEELTANNDGLKLNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I + ++ + ++ G + D+ L+ ++ + + DL+IRTGGE R+S+F
Sbjct: 121 YGGRWDIIQGMRQLAGQVQKGLLQPEDITEELLNSHICLHEQSEVDLVIRTGGEHRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LLWQ+AY+E F WPDF +F ALN + R+RRFGG +
Sbjct: 181 LLWQIAYAELYFTDVLWPDFDELVFEGALNAFAQRERRFGGTT 223
>gi|15827262|ref|NP_301525.1| undecaprenyl pyrophosphate synthase [Mycobacterium leprae TN]
gi|221229740|ref|YP_002503156.1| undecaprenyl pyrophosphate synthase [Mycobacterium leprae Br4923]
gi|586272|sp|P38119|UPPS_MYCLE RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|466983|gb|AAA17169.1| B1937_F2_65 [Mycobacterium leprae]
gi|13092811|emb|CAC30142.1| putative undecaprenyl pyrophosphate synthetase [Mycobacterium
leprae]
gi|219932847|emb|CAR70727.1| putative undecaprenyl pyrophosphate synthetase [Mycobacterium
leprae Br4923]
Length = 296
Score = 264 bits (675), Expect = 7e-69, Method: Composition-based stats.
Identities = 86/234 (36%), Positives = 137/234 (58%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ ++ P H+ I+MDGNGRWA RGL R GH+ G V ++ A E+GIK L+++AF
Sbjct: 61 RLSAAQLPTHVAIVMDGNGRWANQRGLHRTEGHKMGEAVVIDVACGAIELGIKWLSLYAF 120
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R V E+ L+ + +++ +LK+ +++R +G+R L ++ L AE
Sbjct: 121 STENWKRSVEEVRFLMGFNRDVVRRRRENLKEMGVRIRWVGSRPRLWRSVINELAIAEHM 180
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T N + + NY R EI+ A + I + +G + + S I ++L D+PD D
Sbjct: 181 TAGNDVITINYCVNYGGRTEIAEATREIARLAAAGRLNPERITESTITRHLQRPDIPDVD 240
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
L +RT GE+R S+F+LWQ AY+E++F + WPD+ R + A +Y R+RRFG
Sbjct: 241 LFVRTSGEQRSSNFMLWQAAYTEYIFQDKLWPDYDRRDLWAACEEYASRNRRFG 294
>gi|114777896|ref|ZP_01452810.1| undecaprenyl diphosphate synthase [Mariprofundus ferrooxydans PV-1]
gi|114551683|gb|EAU54235.1| undecaprenyl diphosphate synthase [Mariprofundus ferrooxydans PV-1]
Length = 249
Score = 264 bits (675), Expect = 7e-69, Method: Composition-based stats.
Identities = 89/241 (36%), Positives = 131/241 (54%), Gaps = 3/241 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M + P H+GIIMDGNGRWA A+G R GH+KG EV ++V A +GI+ L+++AFS
Sbjct: 7 MGKPALPKHVGIIMDGNGRWAKAQGSARLEGHQKGAEVARDVVKWARNIGIRQLSLYAFS 66
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP E+ L+ L+ L + +++N I+ RV+G+ L +++A +T
Sbjct: 67 TENWDRPKLEVRGLMSLLAMMLPRSLPDMQQNGIRFRVLGDIAPLPGSARRAVEKACAET 126
Query: 125 RLNTGLNLFIAFNYSSRDEISRA---IKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
NT L+L + NY + EI A + + + + DV
Sbjct: 127 AANTDLDLILCLNYGGQQEILAAVKDVMRWALQQPDCDQALNSLTPETFRSMMWRHDVAP 186
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRTGGEKR+S+F LW AY+E F WPDF + AL++Y R+RRFG S+
Sbjct: 187 LDLMIRTGGEKRISNFHLWDAAYAELYFTDVLWPDFCEQDLQAALSEYAGRERRFGLTSE 246
Query: 242 K 242
+
Sbjct: 247 Q 247
>gi|328543715|ref|YP_004303824.1| Undecaprenyl pyrophosphate synthetase 2 (UPP synthetase 2)
(Di-trans,poly-cis-decaprenylcistransferase 2)
(Undecaprenyl diphosphate synthase 2) (UDS 2)
[polymorphum gilvum SL003B-26A1]
gi|326413459|gb|ADZ70522.1| Undecaprenyl pyrophosphate synthetase 2 (UPP synthetase 2)
(Di-trans,poly-cis-decaprenylcistransferase 2)
(Undecaprenyl diphosphate synthase 2) (UDS 2)
[Polymorphum gilvum SL003B-26A1]
Length = 231
Score = 264 bits (675), Expect = 7e-69, Method: Composition-based stats.
Identities = 116/228 (50%), Positives = 152/228 (66%)
Query: 15 GIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSE 74
+IMDGNGRWA ARGLPR GHR G+E + AAEVGI +T+F+FS NW RP E
Sbjct: 2 ALIMDGNGRWAQARGLPRTEGHRHGLEALRATIRRAAEVGIDYVTVFSFSSENWARPDGE 61
Query: 75 ISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFI 134
+S L+ L++ F+++ + + NI+VRVIG R L+ I +L+EAE TR NTG+ L +
Sbjct: 62 VSYLMGLLRRFVQRDLSEIHQANIRVRVIGAREGLEPGIRGLLEEAETLTRANTGMTLVV 121
Query: 135 AFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRL 194
AFNY RDE+ RA+K + +D+ G + + I++ LDT+ +PDPDLIIRT GE RL
Sbjct: 122 AFNYGGRDELVRAVKALAEDVAQGRLRPEAITEDDISRRLDTAGIPDPDLIIRTSGELRL 181
Query: 195 SDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
S+FLLWQ AY+EF F P WPDF F AL + RDRR+GGLS K
Sbjct: 182 SNFLLWQAAYTEFYFSPVLWPDFDAAAFDDALTAFAERDRRYGGLSAK 229
>gi|289450413|ref|YP_003475248.1| di-trans,poly-cis-decaprenylcistransferase [Clostridiales genomosp.
BVAB3 str. UPII9-5]
gi|289184960|gb|ADC91385.1| di-trans,poly-cis-decaprenylcistransferase [Clostridiales genomosp.
BVAB3 str. UPII9-5]
Length = 261
Score = 264 bits (675), Expect = 7e-69, Method: Composition-based stats.
Identities = 99/233 (42%), Positives = 143/233 (61%), Gaps = 4/233 (1%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P+H+ IIMDGNGRWA AR LPR GHR G + EIV AA ++GIK LT++AFS NW+
Sbjct: 27 IPEHVAIIMDGNGRWATARKLPRQLGHRAGAKNLKEIVRAAGQLGIKYLTVYAFSTENWQ 86
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP +E++ L++L F L N++++R G+ L ++ + AE + G
Sbjct: 87 RPKNEVNALMQLFVDFFLTYDAELALNDVRLRFAGDIDCLPPEVKKTINTAETNSSGRHG 146
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L IAFNY R E+ RA + + + + ++ S I+ L DVPDP++IIRTG
Sbjct: 147 LQLIIAFNYGGRRELLRAFQKLA----ATGIPFDSLNESDISGALYLPDVPDPEMIIRTG 202
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE RLS+FLLWQ AY+E P+ WP+F+ + ++ YN RDR+FGG++ +
Sbjct: 203 GEMRLSNFLLWQSAYAELFSSPKLWPEFTEKDLIQIISAYNKRDRKFGGITSE 255
>gi|121998244|ref|YP_001003031.1| undecaprenyl diphosphate synthase [Halorhodospira halophila SL1]
gi|121589649|gb|ABM62229.1| Undecaprenyl pyrophosphate synthetase [Halorhodospira halophila
SL1]
Length = 259
Score = 264 bits (675), Expect = 7e-69, Method: Composition-based stats.
Identities = 98/238 (41%), Positives = 135/238 (56%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ P HI I+MDGNGRWA +G PR AGHR G E+V A + ++ LT+FA
Sbjct: 12 ERLAGVELPRHIAIVMDGNGRWAQRQGQPRYAGHRAGARSVREVVEACGRLELEALTLFA 71
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRRP E+ L++L ++ L + L +N++++ IG+R + + L +AE
Sbjct: 72 FSSENWRRPRGEVRVLMQLFRTTLDQELQRLHENDVRLSFIGDRTQFEAGLQRRLTDAEA 131
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T NTGL L +A +Y R EI+ A + + G V +D L DV DP
Sbjct: 132 LTAENTGLQLIVATSYGGRWEIAEAARRLAASAARGEVDPQSIDEDAFRGALSLPDVVDP 191
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL IRTGGE+R+S+FLLWQ+AY+E F WPDF E A+ Y RDRRFG ++
Sbjct: 192 DLFIRTGGERRISNFLLWQMAYTELHFAETLWPDFGTEGLARAIEDYAARDRRFGAVT 249
>gi|298253427|ref|ZP_06977219.1| undecaprenyl pyrophosphate synthetase [Gardnerella vaginalis 5-1]
gi|297532822|gb|EFH71708.1| undecaprenyl pyrophosphate synthetase [Gardnerella vaginalis 5-1]
Length = 264
Score = 264 bits (675), Expect = 7e-69, Method: Composition-based stats.
Identities = 85/239 (35%), Positives = 143/239 (59%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ P H+G+IMDGNGRWA RG+ R GH+ V +++A A E G++ L+++
Sbjct: 24 IPDFPKGKVPRHVGVIMDGNGRWAKERGMIRTEGHKAAEPVVFDVIAGAIEAGVRYLSLY 83
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
FS NW+R E+ L+ + + + + + ++VR G R L ++ L++A+
Sbjct: 84 TFSTENWKRSPQEVRFLMGFSRDIIHRRVAQMNEWGVRVRWAGRRPRLWKSVIDELEKAQ 143
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ T+ N +++ NY R EI+ A I ++I++G + V +IA++L D+PD
Sbjct: 144 EITKNNKTIDVVFCINYGGRAEIADACAQIAKEIQNGKIKGDRVSEKMIAEHLYNPDIPD 203
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRT GE+R S+FL WQ +Y+E F+PE +PD+ RE+ + ++++Y RDRRFGG+
Sbjct: 204 CDLVIRTSGEQRTSNFLPWQASYAELDFVPELFPDYGREVLWRSIDRYAHRDRRFGGVK 262
>gi|282856756|ref|ZP_06266017.1| di-trans,poly-cis-decaprenylcistransferase [Pyramidobacter
piscolens W5455]
gi|282585379|gb|EFB90686.1| di-trans,poly-cis-decaprenylcistransferase [Pyramidobacter
piscolens W5455]
Length = 233
Score = 264 bits (675), Expect = 8e-69, Method: Composition-based stats.
Identities = 96/234 (41%), Positives = 135/234 (57%), Gaps = 6/234 (2%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
++ P H+ +IMDGNGRWA RGLPR GHR GI V AA E+GI L+++AFS N
Sbjct: 5 ANLPKHVALIMDGNGRWANKRGLPRLLGHRAGIAALERTVRAAGEMGIGFLSVYAFSTEN 64
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W RP E+ L+ L++ + ++ L KN ++VR G R + D++L ++ +E +T
Sbjct: 65 WNRPQLEVMGLMALLRYYARRKVPELVKNGVRVRFCGARRGVPDEVLRIIDWSETETARC 124
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+ L + FNY R EI AI + + E+ S + K+L DVPDPDLIIR
Sbjct: 125 GRMTLVVCFNYGGRQEILDAIADAQSNGETIS------SEEDLRKHLYLPDVPDPDLIIR 178
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
T GE R+S+F LWQ +YSE+ F WPDF AL Y R+RR+G + +
Sbjct: 179 TSGELRISNFWLWQGSYSEYYFTDTLWPDFGAAELKKALQSYAGRERRYGRVEE 232
>gi|296118175|ref|ZP_06836756.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
ammoniagenes DSM 20306]
gi|295968733|gb|EFG81977.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
ammoniagenes DSM 20306]
Length = 256
Score = 264 bits (675), Expect = 8e-69, Method: Composition-based stats.
Identities = 85/243 (34%), Positives = 130/243 (53%), Gaps = 7/243 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLT 59
+++ + P H+ ++ DGN RWA G GHR+G + +E+V+ A+ ++ +T
Sbjct: 16 LISELKGKPQPKHVAVMADGNRRWAREAGFEDISHGHRQGAKKISEMVSWCADTEVEVVT 75
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
I+ S N +R +E+S L +I + S N +VR++G+ L D++ +
Sbjct: 76 IYLLSTENLKRSKNEVSLLFDIITEVVDHL--SHGDLNCQVRLVGHLDLLPDEVTNAMCS 133
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLD 175
A D TR N G+ + IA Y R EI+ A+K + + + + I+K+L
Sbjct: 134 AADDTRDNDGVIVNIAVGYGGRQEIADAVKAMLKKEVEAGATPEELVESITVDSISKHLY 193
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
T +PDPDL+IRT GE+RLS FLLWQ AYSE F YWP F + F AL ++ R RR
Sbjct: 194 TKGLPDPDLVIRTSGEQRLSGFLLWQAAYSEIWFTDTYWPAFRKIDFLRALRDFSQRSRR 253
Query: 236 FGG 238
FG
Sbjct: 254 FGK 256
>gi|241764761|ref|ZP_04762770.1| undecaprenyl diphosphate synthase [Acidovorax delafieldii 2AN]
gi|241365751|gb|EER60423.1| undecaprenyl diphosphate synthase [Acidovorax delafieldii 2AN]
Length = 243
Score = 264 bits (675), Expect = 8e-69, Method: Composition-based stats.
Identities = 96/233 (41%), Positives = 132/233 (56%), Gaps = 7/233 (3%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI I+MDGNGRWA R LPR AGH++G++ A AE G+ LT+FAFS NW
Sbjct: 7 VPHHIAIVMDGNGRWATRRFLPRLAGHKQGVDSLRRCARACAERGVAVLTVFAFSSENWN 66
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+S L++L+ L + LKK+ +++ +G R L + L +AE T NT
Sbjct: 67 RPADEVSGLMELLALALAREVPQLKKDGVRLFFVGERAGLSPKVRDGLAQAEAATAENTR 126
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L + FNY R +I Q + + + + + + + VPDPDL+IRTG
Sbjct: 127 LVLNVCFNYGGRWDI-------AQAAAALAARGEPITEASLHGAMALAHVPDPDLVIRTG 179
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE R+S+FLLWQVAYSE F WPDF A+ Y+ R+RRFG S++
Sbjct: 180 GEMRISNFLLWQVAYSELYFSDRLWPDFDESALDEAIAVYSARERRFGKTSEQ 232
>gi|288574895|ref|ZP_06393252.1| undecaprenyl diphosphate synthase [Dethiosulfovibrio peptidovorans
DSM 11002]
gi|288570636|gb|EFC92193.1| undecaprenyl diphosphate synthase [Dethiosulfovibrio peptidovorans
DSM 11002]
Length = 232
Score = 264 bits (675), Expect = 8e-69, Method: Composition-based stats.
Identities = 96/228 (42%), Positives = 129/228 (56%), Gaps = 5/228 (2%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA RGLPR GHR G+ IV AA + GI+ L+++AFS NW RP
Sbjct: 10 HLAIIMDGNGRWAKKRGLPRLLGHRAGVNTLERIVYAAKDRGIRYLSVYAFSNENWNRPS 69
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
EI L+KL + +K L K +I+VR G + L + ++ + AE +T + L
Sbjct: 70 VEIKGLMKLFSYYARKKLRDLVKADIRVRFAGRKEGLPESVVQAMDVAETETFDCEKMTL 129
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
FNY R EI ++ ++ + + I L +VPDPDLI+RT GE
Sbjct: 130 IACFNYGGRQEIVDSVNRFVKEHPG-----EPISENAICSNLYLPEVPDPDLIVRTSGEL 184
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RLS+F LWQ +YSEF F WPDF+ E AL +N R+RR+GGL
Sbjct: 185 RLSNFWLWQSSYSEFFFTSSLWPDFTPEALDEALKTFNKRERRYGGLK 232
>gi|158313953|ref|YP_001506461.1| undecaprenyl diphosphate synthase [Frankia sp. EAN1pec]
gi|158109358|gb|ABW11555.1| undecaprenyl diphosphate synthase [Frankia sp. EAN1pec]
Length = 333
Score = 264 bits (675), Expect = 8e-69, Method: Composition-based stats.
Identities = 97/235 (41%), Positives = 143/235 (60%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P H+GI+MDGNGRWA RGLPR GH G E + V A E+G++ L+++AFS
Sbjct: 94 LPRALVPQHVGIVMDGNGRWAKLRGLPRTKGHEAGEEALFDCVEGAIEMGVRWLSVYAFS 153
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+R E++ L++ + + + ++VR G R L +++ L+ AE +T
Sbjct: 154 TENWKRSPDEVAFLMRFTDGVFGRRIDDMDELGVRVRWAGRRPRLWGNVIRRLESAEQRT 213
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
R N L L + NY R E++ A I +D+ +G + V+ +A+YLD D+PD DL
Sbjct: 214 RDNDRLTLVMCVNYGGRAELADAAAAIARDVRAGLLRPERVNEETVARYLDEPDMPDVDL 273
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE+RLS+FLLWQ AY+EF F+P WPDF R + A +Y RDRR+GG+
Sbjct: 274 LIRTSGEQRLSNFLLWQAAYAEFSFVPTLWPDFDRRDLWLACEEYARRDRRYGGI 328
>gi|255292991|dbj|BAH90088.1| undecaprenyl pyrophosphate synthetase [uncultured bacterium]
Length = 278
Score = 264 bits (675), Expect = 9e-69, Method: Composition-based stats.
Identities = 86/235 (36%), Positives = 130/235 (55%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P+H+ I+MDGNGRWA R LPR GH G V +++ A E+G+ L+++AF
Sbjct: 37 ELPGELVPNHVAIVMDGNGRWAKQRNLPRTKGHEAGEAVLFDVIEGAIEIGVNYLSVYAF 96
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRR E+ L+ + + + L ++VR G R L ++ L+ AE+Q
Sbjct: 97 STENWRRSPDEVRFLMGFNRDVIHRRRDELDDLGVRVRWAGRRPKLWGSVIKELQVAEEQ 156
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
++ NT L L NY R EI A + + + + G + + +LD ++PD D
Sbjct: 157 SKNNTTLTLQFCVNYGGRAEIVDAAREVARLAKEGKLDPTRLTEERFRHFLDEPEIPDVD 216
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R+ GE+R S+FLLWQ AY+E VF+ WPD+ R + A+ Y RDRR+GG
Sbjct: 217 LFVRSSGEQRFSNFLLWQSAYAEMVFLDTLWPDWDRRHLWQAIELYARRDRRYGG 271
>gi|4768864|gb|AAD29658.1|AF124757_18 unknown [Zymomonas mobilis subsp. mobilis ZM4]
Length = 222
Score = 264 bits (674), Expect = 9e-69, Method: Composition-based stats.
Identities = 103/222 (46%), Positives = 147/222 (66%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA+AR LPR AGH+KG + V AAAE+GI+ LT++AFS NWRRP SE+++
Sbjct: 1 MDGNGRWASARHLPRIAGHKKGADAVKTTVRAAAEMGIEVLTLYAFSSENWRRPASEVAD 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ L++ L++ +++K+ I ++VIG+ LD D++ +L +A + T NT L L A N
Sbjct: 61 LMGLLRLCLRQEMHNIKERGICLKVIGDYTRLDQDLVALLNQAIEITANNTRLTLVFALN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y ++DE+ K I + + G + ++D I L T D+P DL+IRT GEKRLS+F
Sbjct: 121 YGAQDELVHVTKRIAEKAKEGQLDPENIDVGTIESLLYTHDLPPLDLVIRTSGEKRLSNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
LLWQ AY+E +FI WPDF E A+ +Y R+RR+GGL
Sbjct: 181 LLWQAAYAELLFIDTLWPDFGSETLKAAVEEYARRERRYGGL 222
>gi|262203042|ref|YP_003274250.1| undecaprenyl diphosphate synthase [Gordonia bronchialis DSM 43247]
gi|262086389|gb|ACY22357.1| undecaprenyl diphosphate synthase [Gordonia bronchialis DSM 43247]
Length = 276
Score = 264 bits (674), Expect = 9e-69, Method: Composition-based stats.
Identities = 90/239 (37%), Positives = 137/239 (57%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ S P H+ ++MDGNGRWA RGLPR GH++G V + V E+G+ L+ +AF
Sbjct: 38 AIPSEFVPRHVALVMDGNGRWATDRGLPRTEGHKRGEAVLMDTVCGCIELGVTWLSAYAF 97
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW R E+ L+ + +++ + + ++VR G R L ++ L+ AE+
Sbjct: 98 STENWSRSPDEVRFLMGFNRDVIRRRRDEMNEMGVRVRWAGRRPRLWRSVIRELEVAEEL 157
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
TR NT + L + NY R EI+ A + I + G + + S A+YLD D+PD D
Sbjct: 158 TRDNTVMTLTMCVNYGGRAEIADAAREIARRAARGEIDPERISESTFARYLDEPDMPDVD 217
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L +R GE+R+S+FLLWQ AY+E V+ + +PDF R + A +Y RDRRFGG+ +
Sbjct: 218 LFLRPSGEQRISNFLLWQSAYAEMVYQEKLFPDFDRRDLWAACLEYASRDRRFGGVKPQ 276
>gi|255293007|dbj|BAH90103.1| undecaprenyl diphosphate synthase [uncultured bacterium]
Length = 252
Score = 264 bits (674), Expect = 9e-69, Method: Composition-based stats.
Identities = 86/235 (36%), Positives = 130/235 (55%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P+H+ I+MDGNGRWA R LPR GH G V +++ A E+G+ L+++AF
Sbjct: 11 ELPGELVPNHVAIVMDGNGRWAKQRNLPRTKGHEAGEAVLFDVIEGAIEIGVNYLSVYAF 70
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRR E+ L+ + + + L ++VR G R L ++ L+ AE+Q
Sbjct: 71 STENWRRSPDEVRFLMGFNRDVIHRRRDELDDLGVRVRWAGRRPKLWGSVIKELQVAEEQ 130
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
++ NT L L NY R EI A + + + + G + + +LD ++PD D
Sbjct: 131 SKNNTTLTLQFCVNYGGRAEIVDAAREVARLAKEGKLDPTRLTEERFRHFLDEPEIPDVD 190
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R+ GE+R S+FLLWQ AY+E VF+ WPD+ R + A+ Y RDRR+GG
Sbjct: 191 LFVRSSGEQRFSNFLLWQSAYAEMVFLDTLWPDWDRRHLWQAIELYARRDRRYGG 245
>gi|160944137|ref|ZP_02091367.1| hypothetical protein FAEPRAM212_01639 [Faecalibacterium prausnitzii
M21/2]
gi|158444813|gb|EDP21817.1| hypothetical protein FAEPRAM212_01639 [Faecalibacterium prausnitzii
M21/2]
Length = 237
Score = 264 bits (674), Expect = 9e-69, Method: Composition-based stats.
Identities = 97/226 (42%), Positives = 143/226 (63%), Gaps = 1/226 (0%)
Query: 14 IGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVS 73
IGIIMDGNGRWA RGLPR AGH+KG VF +I E+G+ ++ +AFS NW+RP+
Sbjct: 13 IGIIMDGNGRWAKNRGLPRTAGHKKGAAVFKDIANYCDELGVASVYFYAFSTENWKRPLE 72
Query: 74 EISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLF 133
E+ ++KL +L +GF K NI+++ +G+R +LD + ++ E E + TG+ L
Sbjct: 73 EVGAIMKLFAQYLIEGFD-YKNRNIRIKFLGDRTALDPKLQKMMNELEGDSACKTGMTLN 131
Query: 134 IAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKR 193
IA NY R EI RA + + + +G + D++ +++ + T+ DPD I+R GEKR
Sbjct: 132 IAINYGGRPEIVRAAQQLAAKVVAGEIRPEDINEQMMSDAMYTAGQKDPDFILRPSGEKR 191
Query: 194 LSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
LS+F+LWQ AYSE V + WPDF+R A+ ++N R RRFGG+
Sbjct: 192 LSNFMLWQAAYSELVEMDVLWPDFTRADLDTAIEEFNHRSRRFGGI 237
>gi|328955483|ref|YP_004372816.1| Undecaprenyl pyrophosphate synthetase [Coriobacterium glomerans
PW2]
gi|328455807|gb|AEB07001.1| Undecaprenyl pyrophosphate synthetase [Coriobacterium glomerans
PW2]
Length = 264
Score = 264 bits (674), Expect = 1e-68, Method: Composition-based stats.
Identities = 91/242 (37%), Positives = 136/242 (56%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+A++ + P H+ IMDGNGRWA ARGL R GH+ GI EI+ +G+ L+ +
Sbjct: 21 LAALDLTRIPSHVSCIMDGNGRWAIARGLSRAEGHKAGIVALREIITTCVRLGVDVLSAY 80
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E++ L+ L L++ +++V +G+ +L V +
Sbjct: 81 AFSTENWTRPQHEVNLLMHLFAKTFIDELPLLRREDVRVVFLGDISALPRKTREVFEFGL 140
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ + G+ L +A NY R EI+RA + I Q + +G + DVD ++ L T D+PD
Sbjct: 141 RECENHRGMILALAVNYGGRAEITRAARLIAQQVAAGQLALSDVDERTLSDRLYTVDLPD 200
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
P+L+IRT GE R+S++LLWQ+AY+EF WPDF R A+ Y R+RRFGG+
Sbjct: 201 PELVIRTSGEFRVSNYLLWQIAYAEFYVTDTCWPDFDRWGLLEAILSYQGRERRFGGVGA 260
Query: 242 KG 243
Sbjct: 261 GA 262
>gi|254513847|ref|ZP_05125908.1| undecaprenyl pyrophosphate synthetase 1 [gamma proteobacterium
NOR5-3]
gi|219676090|gb|EED32455.1| undecaprenyl pyrophosphate synthetase 1 [gamma proteobacterium
NOR5-3]
Length = 236
Score = 264 bits (674), Expect = 1e-68, Method: Composition-based stats.
Identities = 91/221 (41%), Positives = 127/221 (57%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGN RWA R LP AGHR G+E ++ A E G++ LT+FAFS NW RP+ E+
Sbjct: 1 MDGNNRWARQRSLPGVAGHRAGVEAVRGVMRACREHGVEVLTLFAFSSENWSRPLPEVRA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ L+ +L+ L ++N+++R IG R + ++ AE T NT + IA +
Sbjct: 61 LLALLSRYLRTEVKQLHEDNVRLRFIGKRSRFSAGLQRLITHAETVTAGNTAATVIIAVD 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y + +I+RA + + + G + D+ + L+ L D P PDL IRTGG+ R+S+F
Sbjct: 121 YGGQWDITRAARELASRCQQGELKPEDITAQLLQNTLSLGDFPRPDLCIRTGGDARISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
LLW AYSEF F P WPDF F AL Y R+RRFGG
Sbjct: 181 LLWDFAYSEFYFTPVLWPDFGELEFARALADYGKRERRFGG 221
>gi|332023727|gb|EGI63951.1| Dehydrodolichyl diphosphate synthase [Acromyrmex echinatior]
Length = 295
Score = 264 bits (674), Expect = 1e-68, Method: Composition-based stats.
Identities = 82/234 (35%), Positives = 129/234 (55%), Gaps = 3/234 (1%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + + P H+ IMDGN R+A + L + GH KG + E++ ++G+ +T++
Sbjct: 17 LRIIKTGEVPKHVAFIMDGNRRYANKQNLQKKEGHSKGFDKMTEMLNWCMDLGVVEVTVY 76
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLK 118
FSI N++R E+ +L+ L + K+ L I VRVIGN + +D+ ++
Sbjct: 77 TFSIENFKRSKEEVDDLMDLARQKFKRLLEEKEKLMDVGICVRVIGNLSLIPEDLCKLVA 136
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
EA TR N L +AF Y+SRDEI+ AIK+I Q ++ + D++ LI+ L T
Sbjct: 137 EAMTITRENNKAFLNLAFAYTSRDEITHAIKDIIQGVKDADILPEDINEDLISDCLYTYK 196
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLR 232
P+PDL+IRT GE R SDFL+WQ++ + F WP+F+ F A+ Y
Sbjct: 197 SPNPDLLIRTSGETRFSDFLMWQISNTCIYFTEVLWPEFNIWNFLSAIFYYQRC 250
>gi|68536553|ref|YP_251258.1| hypothetical protein jk1467 [Corynebacterium jeikeium K411]
gi|260577695|ref|ZP_05845630.1| undecaprenyl diphosphate synthase [Corynebacterium jeikeium ATCC
43734]
gi|68264152|emb|CAI37640.1| uppS1 [Corynebacterium jeikeium K411]
gi|258604090|gb|EEW17332.1| undecaprenyl diphosphate synthase [Corynebacterium jeikeium ATCC
43734]
Length = 256
Score = 264 bits (674), Expect = 1e-68, Method: Composition-based stats.
Identities = 82/242 (33%), Positives = 123/242 (50%), Gaps = 7/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGL-PRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ S+ P H+ I+ DGN RWA G GHR G E+ E+GI+ +T
Sbjct: 16 LARSLREKPRPKHVAIMADGNRRWARENGFTDVSHGHRVGARKIAEMCGWCDELGIETVT 75
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++ S N +R E+S L +I ++ S ++R +G+ L + + L+E
Sbjct: 76 VYLLSTENLKRSPEELSLLCSIIGDVAEELADS--DAGFQLRTVGHLELLPEQLRTRLEE 133
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLD 175
+ +T +TG+ + +A Y R EI A++ + ++ D + + + ++
Sbjct: 134 NQAKTNDHTGVRVNVAVGYGGRQEIVDAVQTLVAELAEQGTAPEDMAEAITAEALGNHMY 193
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
TS PDPDL+IRT GE+RLS FLLWQ AYSE F YWP F R F AL Y+ R RR
Sbjct: 194 TSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEIWFTDTYWPAFRRVDFLRALRDYSQRHRR 253
Query: 236 FG 237
FG
Sbjct: 254 FG 255
>gi|195953625|ref|YP_002121915.1| undecaprenyl diphosphate synthase [Hydrogenobaculum sp. Y04AAS1]
gi|195933237|gb|ACG57937.1| undecaprenyl diphosphate synthase [Hydrogenobaculum sp. Y04AAS1]
Length = 233
Score = 264 bits (674), Expect = 1e-68, Method: Composition-based stats.
Identities = 91/232 (39%), Positives = 131/232 (56%), Gaps = 7/232 (3%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P HI IIMDGNGRWA +G R GH G + + A E+GI +T+FAFS NW
Sbjct: 4 NVPKHIAIIMDGNGRWAQEKGKNRFYGHYAGADAVEPVTLKAKELGISYITLFAFSTENW 63
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP EI L KL K +L + S+ KN IK++ IG + + +++L + E ++ N
Sbjct: 64 KRPKEEIDVLFKLFKEYLIRKEESILKNGIKMKFIGRKDRIPEELLQYMDSIEQKSEKND 123
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+ L +A +Y D+I+RA + + V I K LDT +P DL+IRT
Sbjct: 124 AITLTLAVDYGGLDDITRAFNKLLSQK-------NQVTQEDIKKALDTHFLPAVDLLIRT 176
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
G EKR+S+FLLW +AY+E F +YWPDF+ E + ++ R RRFG +
Sbjct: 177 GNEKRISNFLLWDIAYAEIFFCEKYWPDFTPEDLCMIVEDFSKRKRRFGAVQ 228
>gi|78047030|ref|YP_363205.1| undecaprenyl pyrophosphate synthase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78035460|emb|CAJ23105.1| undecaprenyl pyrophosphate synthetase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 252
Score = 264 bits (674), Expect = 1e-68, Method: Composition-based stats.
Identities = 93/238 (39%), Positives = 137/238 (57%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ S++ P HI IIMDGNGRWA R PR GHR G N + E G+ LT+FAFS
Sbjct: 4 VPSAAVPRHIAIIMDGNGRWAQRRRRPRMIGHRAGARAVNRTIDFCLEKGVSALTLFAFS 63
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP E+ L+KL L + L++ ++VR IG+R + + AE T
Sbjct: 64 SENWGRPQDEVDALMKLFLHALDREVEELQRRGVQVRFIGDRSRFAAPLRERMAGAERST 123
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N+ L L IA +Y R +I+ A + + +D+ +G + +D +L++ + +D+P PDL
Sbjct: 124 ATNSRLVLSIAASYGGRQDIAAAARALAEDVAAGRLQPEQIDEALLSSRVALADLPAPDL 183
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTGG+ R+S+FLLWQ+AY+E F WP+F + AL+ + R+RRFG S +
Sbjct: 184 FIRTGGDTRISNFLLWQLAYTELWFTETLWPEFDAGVLQQALDDFAGRERRFGLTSAQ 241
>gi|295105053|emb|CBL02597.1| Undecaprenyl pyrophosphate synthetase [Faecalibacterium prausnitzii
SL3/3]
Length = 237
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 97/226 (42%), Positives = 142/226 (62%), Gaps = 1/226 (0%)
Query: 14 IGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVS 73
IGIIMDGNGRWA RGLPR AGH+KG VF +I E+G+ ++ +AFS NW+RP+
Sbjct: 13 IGIIMDGNGRWAKNRGLPRTAGHKKGAAVFKDIANYCDELGVASVYFYAFSTENWKRPLE 72
Query: 74 EISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLF 133
E+ ++KL +L +GF K NI+++ +G+R +LD + ++ E E + TG+ L
Sbjct: 73 EVGAIMKLFAQYLIEGFD-YKNRNIRIKFLGDRTALDPKLQKMMNELEGDSACKTGMTLN 131
Query: 134 IAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKR 193
IA NY R EI RA + + +G + D++ +++ + T+ DPD I+R GEKR
Sbjct: 132 IAINYGGRPEIVRAAQQLAAKAVAGEIRPEDINEQMMSDAMYTAGQKDPDFILRPSGEKR 191
Query: 194 LSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
LS+F+LWQ AYSE V + WPDF+R A+ ++N R RRFGG+
Sbjct: 192 LSNFMLWQAAYSELVEMDVLWPDFTRADLDTAIEEFNHRSRRFGGI 237
>gi|257055407|ref|YP_003133239.1| Undecaprenyl pyrophosphate synthetase [Saccharomonospora viridis
DSM 43017]
gi|256585279|gb|ACU96412.1| Undecaprenyl pyrophosphate synthetase [Saccharomonospora viridis
DSM 43017]
Length = 264
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 90/235 (38%), Positives = 138/235 (58%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ P H+ ++MDGNGRWA RGLPR GH++G V ++ + A E+GIK L+++AF
Sbjct: 17 NIPPELVPKHVALVMDGNGRWANQRGLPRIEGHKRGEAVMIDVASGAVELGIKWLSVYAF 76
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + +++ L +++R G L ++ L++AE++
Sbjct: 77 STENWKRSPDEVRFLMGFNRDTIRRQVDYLGSIGVRIRWAGRAPRLWRSVIKELRDAEEK 136
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NT +N+ + NY R E+ A + I Q +G + VD ++AKYL ++PD D
Sbjct: 137 TKHNTRMNMTMCVNYGGRAELGDAARRIAQLAAAGKIDPDKVDDRMLAKYLYQPEMPDVD 196
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R GE R S+FLLWQ AY+EFVF +PDF R + A +Y RDRRFG
Sbjct: 197 LFLRPSGELRTSNFLLWQSAYAEFVFQDTLFPDFDRRKLWEACLEYAKRDRRFGA 251
>gi|119386702|ref|YP_917757.1| undecaprenyl diphosphate synthase [Paracoccus denitrificans PD1222]
gi|119377297|gb|ABL72061.1| Undecaprenyl pyrophosphate synthetase [Paracoccus denitrificans
PD1222]
Length = 244
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 98/228 (42%), Positives = 137/228 (60%), Gaps = 2/228 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGNGRWA RG PR GHR+G E +IV A ++G+ LT++AFS NW+R
Sbjct: 18 PRHVAIIMDGNGRWAKNRGWPRLVGHRRGAERVKQIVRACPDLGVNWLTVYAFSTENWKR 77
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + ++++ L +++R IG R L+ + ++ E +T NT L
Sbjct: 78 STEEVLGLMGIFARYIEREADGLSAEGVRMRFIGGRERLEPKLQRLMAGIEARTAGNTRL 137
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL +A NY RDE++RA + I G V + + +A LDT+ PDPDL+IRT G
Sbjct: 138 NLTVAINYGGRDELTRAAARLAARIGRGEVA--EPTEADLADCLDTAGHPDPDLVIRTSG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E R S+FL +Q AYSE+ F WPDF+ E L++Y LRDRRFGG
Sbjct: 196 ETRTSNFLPFQAAYSEYEFTQTLWPDFTPEHLAEILDRYGLRDRRFGG 243
>gi|315443761|ref|YP_004076640.1| undecaprenyl pyrophosphate synthetase [Mycobacterium sp. Spyr1]
gi|315262064|gb|ADT98805.1| Undecaprenyl pyrophosphate synthetase [Mycobacterium sp. Spyr1]
Length = 292
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 87/235 (37%), Positives = 133/235 (56%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P H+ ++MDGNGRWA RGL R GH+ G V +I A E+GIK+LT++AF
Sbjct: 57 QIPADQVPQHVAVVMDGNGRWATQRGLGRTEGHKMGEAVLIDITCGAIEIGIKHLTVYAF 116
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + +++ +L +++R +G+R + ++ AE
Sbjct: 117 STENWKRSTEEVRFLMGFNREVVRRRRENLNDMGVRMRWVGSRPRMWSSVIKEFDIAEQM 176
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T N + + NY R EI A + + Q G + + + + AK+L SD+PD D
Sbjct: 177 TVDNDVITINYCVNYGGRTEIVEAARELAQQAVDGKIKPNRITEAQFAKHLHRSDIPDVD 236
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L IRT GE+R S+FLLWQ AY+E+VF + WPD+ R + A +Y R+RRFG
Sbjct: 237 LFIRTSGEQRASNFLLWQAAYAEYVFQDKLWPDYDRRDLWAACEEYVHRNRRFGR 291
>gi|160286206|pdb|2VG2|A Chain A, Rv2361 With Ipp
gi|160286207|pdb|2VG2|B Chain B, Rv2361 With Ipp
gi|160286208|pdb|2VG2|C Chain C, Rv2361 With Ipp
gi|160286209|pdb|2VG2|D Chain D, Rv2361 With Ipp
gi|161172295|pdb|2VG4|A Chain A, Rv2361 Native
gi|161172296|pdb|2VG4|B Chain B, Rv2361 Native
gi|161172297|pdb|2VG4|C Chain C, Rv2361 Native
gi|161172298|pdb|2VG4|D Chain D, Rv2361 Native
gi|187609138|pdb|2VG3|A Chain A, Rv2361 With Citronellyl Pyrophosphate
gi|187609139|pdb|2VG3|B Chain B, Rv2361 With Citronellyl Pyrophosphate
gi|187609140|pdb|2VG3|C Chain C, Rv2361 With Citronellyl Pyrophosphate
gi|187609141|pdb|2VG3|D Chain D, Rv2361 With Citronellyl Pyrophosphate
Length = 284
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 88/234 (37%), Positives = 140/234 (59%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P+H+ I+MDGNGRWA RGL R GH+ G V +I A E+GIK L+++AF
Sbjct: 49 RIPADRLPNHVAIVMDGNGRWATQRGLARTEGHKMGEAVVIDIACGAIELGIKWLSLYAF 108
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + +++ +LKK +++R +G+R L ++ L AE+
Sbjct: 109 STENWKRSPEEVRFLMGFNRDVVRRRRDTLKKLGVRIRWVGSRPRLWRSVINELAVAEEM 168
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N + + NY R EI+ A + I +++ +G + + S IA++L D+PD D
Sbjct: 169 TKSNDVITINYCVNYGGRTEITEATREIAREVAAGRLNPERITESTIARHLQRPDIPDVD 228
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
L +RT GE+R S+F+LWQ AY+E++F + WPD+ R + A +Y R RRFG
Sbjct: 229 LFLRTSGEQRSSNFMLWQAAYAEYIFQDKLWPDYDRRDLWAACEEYASRTRRFG 282
>gi|238787230|ref|ZP_04631029.1| Di-trans,poly-cis-decaprenylcistransferase [Yersinia frederiksenii
ATCC 33641]
gi|238724492|gb|EEQ16133.1| Di-trans,poly-cis-decaprenylcistransferase [Yersinia frederiksenii
ATCC 33641]
Length = 230
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 85/223 (38%), Positives = 131/223 (58%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA RG R GH+ G++ V+ AA + LT++AFS NW RP E+S
Sbjct: 1 MDGNGRWAKNRGKLRVFGHKAGVKSVRRAVSFAASHQLDALTLYAFSSENWNRPAQEVSA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L L SL K+N+++ VIG+ + + ++ +E+ T N GL L IA N
Sbjct: 61 LMELFVRALDSEVKSLHKHNVRLSVIGDISRFSERLQQRIRRSEELTADNDGLKLNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I + ++++ + ++ G + D+ + ++ + + DL+IRTGGE R+S+F
Sbjct: 121 YGGRWDIIQGMRHLAEQVQLGELQPADISEESLNSHICLHEQSEVDLVIRTGGEHRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LLWQ+AY+E F WPDF +F ALN + R+RRFGG +
Sbjct: 181 LLWQIAYAELYFTDVLWPDFDEHVFEGALNAFAQRERRFGGTT 223
>gi|238784885|ref|ZP_04628885.1| Di-trans,poly-cis-decaprenylcistransferase [Yersinia bercovieri
ATCC 43970]
gi|238714202|gb|EEQ06214.1| Di-trans,poly-cis-decaprenylcistransferase [Yersinia bercovieri
ATCC 43970]
Length = 230
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 83/223 (37%), Positives = 131/223 (58%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA +G R GH+ G++ V+ AA + LT++AFS NW RP E++
Sbjct: 1 MDGNGRWAKNQGKLRVFGHKAGVKSVRRAVSFAATHHLDALTLYAFSSENWNRPAQEVTA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L L SL K+N+++ VIG+ + + ++ +E T N GL L IA N
Sbjct: 61 LMELFVRALDSEVKSLHKHNVRLSVIGDISRFSERLQQRIRRSEVLTANNDGLKLNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I + ++++ + ++ G + D++ + ++ + + DL+IRTGGE R+S+F
Sbjct: 121 YGGRWDIIQGVRHLAEQVQRGELQPTDINEESLNSHICLHEQSEVDLVIRTGGEHRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LLWQ+AY+E F WPDF +F ALN + R+RRFGG +
Sbjct: 181 LLWQIAYAELYFTDVLWPDFDEHVFEGALNAFAQRERRFGGTT 223
>gi|260575885|ref|ZP_05843880.1| undecaprenyl diphosphate synthase [Rhodobacter sp. SW2]
gi|259021811|gb|EEW25112.1| undecaprenyl diphosphate synthase [Rhodobacter sp. SW2]
Length = 253
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 94/228 (41%), Positives = 132/228 (57%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA RG PR GHRKG E +IV A ++GI LT++AFS NW+R
Sbjct: 24 HVAIIMDGNGRWATERGWPRLVGHRKGAERVKQIVRCAPDLGISWLTLYAFSTENWKRST 83
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+ L+ + ++++ L +++R IG+R LD + ++ E +T LNL
Sbjct: 84 EEVLGLMSIFARYIEREADRLAAEGVRMRFIGDRSRLDPKLRSLMAGIETRTAPLKRLNL 143
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA NY RDE+ RA + D+ +G + DVD + + LDT+ +PDPDL+IRT GE
Sbjct: 144 TIAINYGGRDELVRAAARLALDVAAGRLHPDDVDEAELTARLDTAGIPDPDLVIRTSGET 203
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
R S+FL WQ AY+E+ F WPDF + + R+RRFG
Sbjct: 204 RTSNFLPWQAAYAEYEFTQTMWPDFLPAELARIVGSFGQRERRFGAAQ 251
>gi|330444194|ref|YP_004377180.1| undecaprenyl diphosphate synthase [Chlamydophila pecorum E58]
gi|328807304|gb|AEB41477.1| undecaprenyl diphosphate synthase [Chlamydophila pecorum E58]
Length = 252
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 95/237 (40%), Positives = 135/237 (56%), Gaps = 4/237 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAAR----GLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ P H+ IIMDGN RW R + +GH G++V +IV++A +GIK LT+F
Sbjct: 16 LGKPLPKHVAIIMDGNRRWLKQRRHLCCKGKTSGHYYGVQVLPKIVSSAVTLGIKVLTLF 75
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
FS N+ R E+ EL L S L K L +++R IG+ L +I + AE
Sbjct: 76 VFSTENFSRSQEEVRELFLLFHSQLGKQLPFLMNQGVRLRCIGDLSKLPQNIQEQITHAE 135
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
QT ++ L L +A NY ++DE+ RA K + D+ + S D+ SL+ YLDT+ + D
Sbjct: 136 KQTENSSCLELVLAINYGAKDELVRAFKKLHYDLTRQKISSEDLSESLVGSYLDTAGLSD 195
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PDL+IRTGGE R+S+FLLWQ+AY+E WPDF+ + F A+ Y R RR G
Sbjct: 196 PDLLIRTGGEMRVSNFLLWQIAYTELYVTEVLWPDFTPQHFIDAIKVYQQRSRRGGK 252
>gi|301632805|ref|XP_002945471.1| PREDICTED: undecaprenyl pyrophosphate synthase-like [Xenopus
(Silurana) tropicalis]
Length = 239
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 95/233 (40%), Positives = 131/233 (56%), Gaps = 7/233 (3%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI I+MDGNGRWA+ R LPR GH++GIE V A E G++ LT+FAFS NW
Sbjct: 7 VPHHIAIVMDGNGRWASHRLLPRLVGHKQGIESLRRCVRACRERGVRVLTVFAFSSENWN 66
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+S L++L+ L + L K +++ +G R L D + L ++E T NT
Sbjct: 67 RPQDEVSGLMELMAMALAREVPQLAKEGVRLHFVGERAGLSDKVRVGLAQSELATAHNTA 126
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L + FNY R +I Q + + + + + + + VPDPDL+IRTG
Sbjct: 127 LVLNVCFNYGGRWDI-------AQAAAALAQRGEPITEASLHAAMAMAHVPDPDLLIRTG 179
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE R+S+FLLWQ AYSE F +WPDF A+ Y R+RRFG S++
Sbjct: 180 GEMRISNFLLWQAAYSELYFSARFWPDFDEAALDEAIAAYGARERRFGKTSEQ 232
>gi|88798261|ref|ZP_01113847.1| undecaprenyl diphosphate synthase [Reinekea sp. MED297]
gi|88779037|gb|EAR10226.1| undecaprenyl diphosphate synthase [Reinekea sp. MED297]
Length = 234
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 92/228 (40%), Positives = 140/228 (61%)
Query: 15 GIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSE 74
IIMDGN RWA R L AGH+ + +V +A G++ LT++AFS NWRRP E
Sbjct: 2 AIIMDGNNRWAKKRLLGGIAGHKAAVSTVRMVVEESARAGVEVLTLYAFSSENWRRPQDE 61
Query: 75 ISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFI 134
++ L+ L L + L +NN+++ VIG++ I + +AE T NTG+ L I
Sbjct: 62 VNALMDLFLMALNREVKKLVRNNLRLVVIGDKSGFSPSIQKAIAKAEADTASNTGMVLAI 121
Query: 135 AFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRL 194
A NY +I++A++ + +E+G + + D+D + I+ + + +P PDL IRT GE+R+
Sbjct: 122 AANYGGHWDIAQAVRKLAHRVEAGELKAEDIDENAISNEVMLAGLPVPDLCIRTAGEQRI 181
Query: 195 SDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
S+FLLWQ+AY+EF F PE+WPDF+RE + A Y+ R RRFG ++
Sbjct: 182 SNFLLWQMAYTEFYFTPEFWPDFNRESLYEAFASYSSRVRRFGRTDEQ 229
>gi|77463258|ref|YP_352762.1| undecaprenyl pyrophosphate synthetase [Rhodobacter sphaeroides
2.4.1]
gi|126462132|ref|YP_001043246.1| undecaprenyl diphosphate synthase [Rhodobacter sphaeroides ATCC
17029]
gi|332558136|ref|ZP_08412458.1| undecaprenyl diphosphate synthase [Rhodobacter sphaeroides WS8N]
gi|77387676|gb|ABA78861.1| Undecaprenyl pyrophosphate synthetase [Rhodobacter sphaeroides
2.4.1]
gi|126103796|gb|ABN76474.1| Undecaprenyl pyrophosphate synthetase [Rhodobacter sphaeroides ATCC
17029]
gi|332275848|gb|EGJ21163.1| undecaprenyl diphosphate synthase [Rhodobacter sphaeroides WS8N]
Length = 247
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 99/236 (41%), Positives = 147/236 (62%), Gaps = 3/236 (1%)
Query: 7 SSSPPD---HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ PP H+ IIMDGNGRWA RG PR GHR+G E EIV A+ +GI+ LT++AF
Sbjct: 9 ADPPPRRADHVAIIMDGNGRWAVDRGWPRLVGHRRGAERVREIVQASPGLGIRWLTVYAF 68
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + ++++ L K I++R IG+R LD + ++ E +
Sbjct: 69 STENWKRSTEEVLGLMSIFARYIEREADRLAKEGIRMRFIGDRTRLDPKLQRLMAGIETR 128
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N LNL +A NY RDE++RA + + QD+ +G + + + D + + LDT+ +PDPD
Sbjct: 129 TQYNQRLNLTVAINYGGRDELARAARRMCQDVAAGHLRAEEADEAALVARLDTAGMPDPD 188
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
L+IRT GE R S+FL WQ AY+E+ F P WPDF+ + ++ R+RRFGG+
Sbjct: 189 LVIRTSGETRTSNFLSWQSAYAEYEFTPTLWPDFTARELETIIGRFAARERRFGGV 244
>gi|320535433|ref|ZP_08035542.1| di-trans,poly-cis-decaprenylcistransferase [Treponema phagedenis
F0421]
gi|320147720|gb|EFW39227.1| di-trans,poly-cis-decaprenylcistransferase [Treponema phagedenis
F0421]
Length = 226
Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats.
Identities = 97/229 (42%), Positives = 139/229 (60%), Gaps = 7/229 (3%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+HI IIMDGNGRWA RGL R GH++G E +IV A + + I +T++AFS NW+R
Sbjct: 5 EHIAIIMDGNGRWAQQRGLSRSRGHQEGYETAKKIVKAVSALKIPYITLYAFSTENWKRT 64
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E+ L+ LIK L+ F +NNI++ IGN +L DI + + ++T+ + G
Sbjct: 65 TEEVGFLMGLIKKHLRAEFQFYVENNIRMIHIGNLSALPKDIQKEISDVTEKTKHHAGTA 124
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+ A NY +DEI RA++ + + + + S ++YLD +PD DL+IRTGGE
Sbjct: 125 VVFAINYGGKDEIIRALQ------KIPADKINSITESSFSEYLD-YPLPDVDLLIRTGGE 177
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
KR+S+FLLWQ AY+E F WPDF+ + AL Y RDRRFGG++
Sbjct: 178 KRISNFLLWQTAYAELYFTDTLWPDFTEDDLHQALQSYKHRDRRFGGIT 226
>gi|16081653|ref|NP_394020.1| hypothetical protein Ta0546 [Thermoplasma acidophilum DSM 1728]
gi|42560012|sp|Q9HKQ0|UPPS_THEAC RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|10639714|emb|CAC11686.1| conserved hypothetical protein [Thermoplasma acidophilum]
Length = 258
Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats.
Identities = 94/240 (39%), Positives = 127/240 (52%), Gaps = 2/240 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + P HIGII DGN R+A G+ GH KG E E+V E+ I+ +T
Sbjct: 19 LLEEVKKYPRPRHIGIITDGNRRYARNVGISENEGHVKGKEKVEEVVDWCMELDIRIVTF 78
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLK--KNNIKVRVIGNRLSLDDDILCVLK 118
+AFS N+RR E+ L LI + K + KN I V+VIGN L + +
Sbjct: 79 YAFSTENFRRSPEEVDFLFHLIDNAFKSLLKDERVYKNRINVKVIGNLSILPAYLRQTIH 138
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
E+ T+ L +A Y R+EI AIK I +D G + ++D YL
Sbjct: 139 IVEETTKNFNNYQLNLAIGYGGREEILDAIKRITRDAMDGKLNIDELDEEKFRMYLYDGR 198
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+PDPDLI+RT GE+R+S+FLLWQ AYSE F YWP+FS+ F A+ Y R RRFG
Sbjct: 199 IPDPDLILRTSGEERISNFLLWQSAYSELYFSDVYWPEFSKLDFLRAIYSYQRRQRRFGR 258
>gi|15835350|ref|NP_297109.1| undecaprenyl pyrophosphate synthetase [Chlamydia muridarum Nigg]
gi|270285522|ref|ZP_06194916.1| undecaprenyl pyrophosphate synthetase [Chlamydia muridarum Nigg]
gi|270289533|ref|ZP_06195835.1| undecaprenyl pyrophosphate synthetase [Chlamydia muridarum Weiss]
gi|301336919|ref|ZP_07225121.1| undecaprenyl pyrophosphate synthase [Chlamydia muridarum MopnTet14]
gi|13633991|sp|Q9PJU2|UPPS_CHLMU RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|7190765|gb|AAF39545.1| undecaprenyl pyrophosphate synthetase [Chlamydia muridarum Nigg]
Length = 253
Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats.
Identities = 91/238 (38%), Positives = 132/238 (55%), Gaps = 4/238 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGL----PRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ P HI IIMDGN RW +GHR+G + +IV AA +G++ LT+
Sbjct: 16 LREPPLPKHIAIIMDGNRRWQKKHEQFCKSNAISGHRRGADSIPQIVDTAALLGVEALTL 75
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS N+ R +E++EL L S L L I++R IG+ L ++ + +A
Sbjct: 76 FAFSTENFSRSKTEVAELFSLFNSQLHSKLSFLHDREIRLRCIGDLSKLPQELQNNIAKA 135
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
T + + L A NY S++E+ RA K + QD+ + + +++ LI+ YLDTS +P
Sbjct: 136 VSATTHYSHMELIFAINYGSKNELVRAFKELHQDLTNKKISINEISEELISSYLDTSGLP 195
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DPDL+IRTGGE R+S+FLLWQ+AY+E WPDF+ A+ Y R RR G
Sbjct: 196 DPDLLIRTGGEMRVSNFLLWQIAYTELYVTDVLWPDFTAHDLLEAIKTYQQRSRRGGK 253
>gi|307210588|gb|EFN87056.1| Dehydrodolichyl diphosphate synthase [Harpegnathos saltator]
Length = 297
Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats.
Identities = 82/234 (35%), Positives = 132/234 (56%), Gaps = 3/234 (1%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ M + P H+ IMDGN R+A + + + GH KG + + ++ ++GI +T++
Sbjct: 17 LKIMRTGHVPKHVAFIMDGNRRYANKKHVAKVEGHTKGFNMLADTLSWCTDLGITEMTVY 76
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLK 118
AFSI N++R E+ L++L K ++ L + I VR+IGN + +DI ++
Sbjct: 77 AFSIENFKRNKEEVDALMELAKQKFERLLEEKDKLMERGICVRIIGNLSLIPEDICKLIA 136
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
+ T+ N L IAF Y+SRDEI+ AIK+I + ++ + D++ LI+ L T +
Sbjct: 137 KIMTITKDNNKAFLNIAFAYTSRDEITCAIKDIVKGVKHNEIVPEDINEDLISNCLYTYN 196
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLR 232
PDPDL+IRT GE RLSDFL+WQ++ + F WP+F+ F A+ Y
Sbjct: 197 SPDPDLLIRTSGEVRLSDFLMWQISDTCVYFANVLWPEFTIWDFLSAIFYYQRC 250
>gi|121606083|ref|YP_983412.1| undecaprenyl diphosphate synthase [Polaromonas naphthalenivorans
CJ2]
gi|120595052|gb|ABM38491.1| Undecaprenyl pyrophosphate synthetase [Polaromonas
naphthalenivorans CJ2]
Length = 250
Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats.
Identities = 91/237 (38%), Positives = 134/237 (56%), Gaps = 2/237 (0%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
V + S + P H+ IIMDGN RWAA R + R GH G +I+ A E G+ LT+F
Sbjct: 3 VFASASVAMPQHVAIIMDGNRRWAAKRSMLRALGHVSGARQVRQIIDACMERGVNYLTLF 62
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E+S L+ L+ +L+K ++ + ++++V+G+ D + ++ +
Sbjct: 63 AFSTENWQRPADEVSSLMGLLVHYLQKEVSAMHASGVRLKVVGDLNRFDGQLQSLMASGQ 122
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T N+ L L IA NY R ++ +A+ + + D++ + Y PD
Sbjct: 123 ALTANNSKLTLTIAANYGGRWDMMQAV--QAWQAANPAQSVADMNEVALRPYFSMGYAPD 180
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PDL+IRTGGE R+S+F+LWQVAY+E F WPDFS + HAL Y RDRRFG
Sbjct: 181 PDLLIRTGGESRISNFMLWQVAYTELFFTDTLWPDFSAQSLDHALQWYQARDRRFGA 237
>gi|88706579|ref|ZP_01104282.1| Undecaprenyl pyrophosphate synthetase [Congregibacter litoralis
KT71]
gi|88699075|gb|EAQ96191.1| Undecaprenyl pyrophosphate synthetase [Congregibacter litoralis
KT71]
Length = 236
Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats.
Identities = 92/221 (41%), Positives = 127/221 (57%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGN RWA R LP AGHR G+E I+ A E GI+ LT+FAFS NW RP+ E+
Sbjct: 1 MDGNNRWARQRSLPGVAGHRAGVEAVRGIMRACREHGIEVLTLFAFSSENWSRPLPEVRS 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ L +L+ L ++N+++R IG R + ++ AE T NT + IA +
Sbjct: 61 LLALFSRYLRTEVKQLHEDNVRLRFIGKRSRFRPGLQRLINHAETVTANNTAATVVIAVD 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y + +I++A + + Q ++G + D+ ++ L D P PDL IRTGG+ R+S+F
Sbjct: 121 YGGQWDITQAAQTLAQRCQAGELDPGDITPEVLQSALSLGDFPSPDLCIRTGGDARISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
LLW AYSEF F P WPDF F AL Y R+RRFGG
Sbjct: 181 LLWDFAYSEFYFTPVLWPDFGELEFARALADYGKRERRFGG 221
>gi|225351487|ref|ZP_03742510.1| hypothetical protein BIFPSEUDO_03082 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225157831|gb|EEG71114.1| hypothetical protein BIFPSEUDO_03082 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 263
Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats.
Identities = 86/241 (35%), Positives = 142/241 (58%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + P HIG+IMDGNGRWA RGL R GH+ V + +A A E G++ L++
Sbjct: 23 IIPDFPKNKVPRHIGVIMDGNGRWAQQRGLIRTDGHQAAEPVVFDTIAGAIEAGVRYLSL 82
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW+R E+ L+ + + + + ++VR G R L ++ L++A
Sbjct: 83 YTFSTENWKRSPQEVRFLMGFSRDIIHRRVEQMNAWGVRVRWSGRRPKLWKSVIDELEKA 142
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+++T+ NT +++ NY R EI+ A I +++ G + V +I+++L D+P
Sbjct: 143 QERTKNNTTIDVVFCLNYGGRAEIADACAAIAKEVRDGKISGDRVTEKMISEHLYNPDIP 202
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
D DL+IRT GE+R S+FL W+ AY+E F+PE +PD R++ + +++ Y RDRRFGG+
Sbjct: 203 DCDLVIRTSGEQRTSNFLPWEAAYAELDFVPELFPDCGRDVLWRSIDHYIHRDRRFGGVK 262
Query: 241 K 241
K
Sbjct: 263 K 263
>gi|125625173|ref|YP_001033656.1| UPP synthetase [Lactococcus lactis subsp. cremoris MG1363]
gi|124493981|emb|CAL98979.1| UPP synthetase [Lactococcus lactis subsp. cremoris MG1363]
gi|300071982|gb|ADJ61382.1| undecaprenyl pyrophosphate synthase [Lactococcus lactis subsp.
cremoris NZ9000]
Length = 244
Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats.
Identities = 95/235 (40%), Positives = 132/235 (56%), Gaps = 8/235 (3%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P+HIGIIMDGNGRWA +G PR GH+ G++ ++ A GIK +T++AFS NW
Sbjct: 14 LPEHIGIIMDGNGRWAKKKGKPRIFGHKAGMDSLKDVAVHGARRGIKVMTVYAFSTENWT 73
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RPV E+ ++ L F K LK+ NI++R+IG R + L + A +T NTG
Sbjct: 74 RPVDEVKFIMSLPIDFYSKYVPVLKEENIQIRMIGERAGMPKATLDSIDRAARETSENTG 133
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLI 185
+ L A NY R +I AI+ + + ++K+L T+ +P DPDLI
Sbjct: 134 MILNFAMNYGGRRDIILAIQELA----KSGQDLSTLTEEDLSKHLQTAVLPENLRDPDLI 189
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IRT GE+R+S+FL WQ AYSE F WPDF A+ + RDRR+GG+
Sbjct: 190 IRTSGEQRMSNFLTWQSAYSELYFAQTAWPDFDEAELDKAIAAFQKRDRRYGGVK 244
>gi|15609498|ref|NP_216877.1| undecaprenyl pyrophosphate synthase [Mycobacterium tuberculosis
H37Rv]
gi|15841873|ref|NP_336910.1| undecaprenyl pyrophosphate synthase [Mycobacterium tuberculosis
CDC1551]
gi|31793538|ref|NP_856031.1| long (C50) chain Z-isoprenyl diphosphate synthase (Z-decaprenyl
diphosphate synthase) [Mycobacterium bovis AF2122/97]
gi|121638240|ref|YP_978464.1| long (C50) chain z-isoprenyl diphosphate synthase [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|148662193|ref|YP_001283716.1| undecaprenyl diphosphate synthase [Mycobacterium tuberculosis
H37Ra]
gi|148823564|ref|YP_001288318.1| long-chain (C50) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis F11]
gi|167968760|ref|ZP_02551037.1| long-chain (C50) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis H37Ra]
gi|215412107|ref|ZP_03420871.1| long-chain (C50) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis 94_M4241A]
gi|215427736|ref|ZP_03425655.1| long-chain (C50) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T92]
gi|215431301|ref|ZP_03429220.1| long-chain (C50) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis EAS054]
gi|215446605|ref|ZP_03433357.1| long-chain (C50) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T85]
gi|218754089|ref|ZP_03532885.1| long-chain (C50) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis GM 1503]
gi|219558351|ref|ZP_03537427.1| long-chain (C50) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T17]
gi|224990734|ref|YP_002645421.1| long (C50) chain z-isoprenyl diphosphate synthase [Mycobacterium
bovis BCG str. Tokyo 172]
gi|253798561|ref|YP_003031562.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis KZN 1435]
gi|254232503|ref|ZP_04925830.1| long chain (C50) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis C]
gi|254365138|ref|ZP_04981184.1| long chain (C50) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis str. Haarlem]
gi|254551408|ref|ZP_05141855.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis '98-R604 INH-RIF-EM']
gi|260187364|ref|ZP_05764838.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis CPHL_A]
gi|260201485|ref|ZP_05768976.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T46]
gi|260205662|ref|ZP_05773153.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis K85]
gi|289443882|ref|ZP_06433626.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T46]
gi|289448003|ref|ZP_06437747.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis CPHL_A]
gi|289553849|ref|ZP_06443059.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis KZN 605]
gi|289570503|ref|ZP_06450730.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T17]
gi|289575055|ref|ZP_06455282.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis K85]
gi|289750960|ref|ZP_06510338.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T92]
gi|289754466|ref|ZP_06513844.1| undecaprenyl diphosphate synthase [Mycobacterium tuberculosis
EAS054]
gi|289758485|ref|ZP_06517863.1| undecaprenyl diphosphate synthase [Mycobacterium tuberculosis T85]
gi|289762527|ref|ZP_06521905.1| long chain (C50) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis GM 1503]
gi|294994535|ref|ZP_06800226.1| undecaprenyl pyrophosphate synthase [Mycobacterium tuberculosis
210]
gi|297634963|ref|ZP_06952743.1| undecaprenyl pyrophosphate synthase [Mycobacterium tuberculosis KZN
4207]
gi|297731955|ref|ZP_06961073.1| undecaprenyl pyrophosphate synthase [Mycobacterium tuberculosis KZN
R506]
gi|298525843|ref|ZP_07013252.1| undecaprenyl diphosphate synthase [Mycobacterium tuberculosis
94_M4241A]
gi|306776626|ref|ZP_07414963.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu001]
gi|306780399|ref|ZP_07418736.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu002]
gi|306785149|ref|ZP_07423471.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu003]
gi|306789510|ref|ZP_07427832.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu004]
gi|306793835|ref|ZP_07432137.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu005]
gi|306798232|ref|ZP_07436534.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu006]
gi|306804108|ref|ZP_07440776.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu008]
gi|306808680|ref|ZP_07445348.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu007]
gi|306968509|ref|ZP_07481170.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu009]
gi|306972738|ref|ZP_07485399.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu010]
gi|307080443|ref|ZP_07489613.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu011]
gi|307085038|ref|ZP_07494151.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu012]
gi|313659289|ref|ZP_07816169.1| undecaprenyl pyrophosphate synthase [Mycobacterium tuberculosis KZN
V2475]
gi|42560516|sp|P60478|UPSS_MYCBO RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|42560517|sp|P60479|UPPS_MYCTU RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|2078038|emb|CAB08462.1| LONG (C50) CHAIN Z-ISOPRENYL DIPHOSPHATE SYNTHASE (Z-DECAPRENYL
DIPHOSPHATE SYNTHASE) [Mycobacterium tuberculosis H37Rv]
gi|13882139|gb|AAK46724.1| undecaprenyl diphosphate synthase [Mycobacterium tuberculosis
CDC1551]
gi|31619131|emb|CAD97243.1| LONG (C50) CHAIN Z-ISOPRENYL DIPHOSPHATE SYNTHASE (Z-DECAPRENYL
DIPHOSPHATE SYNTHASE) [Mycobacterium bovis AF2122/97]
gi|121493888|emb|CAL72363.1| Long (C50) chain z-isoprenyl diphosphate synthase [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|124601562|gb|EAY60572.1| long chain (C50) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis C]
gi|134150652|gb|EBA42697.1| long chain (C50) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis str. Haarlem]
gi|148506345|gb|ABQ74154.1| undecaprenyl diphosphate synthase [Mycobacterium tuberculosis
H37Ra]
gi|148722091|gb|ABR06716.1| long-chain (C50) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis F11]
gi|224773847|dbj|BAH26653.1| long (C50) chain z-isoprenyl diphosphate synthase [Mycobacterium
bovis BCG str. Tokyo 172]
gi|253320064|gb|ACT24667.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis KZN 1435]
gi|289416801|gb|EFD14041.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T46]
gi|289420961|gb|EFD18162.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis CPHL_A]
gi|289438481|gb|EFD20974.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis KZN 605]
gi|289539486|gb|EFD44064.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis K85]
gi|289544257|gb|EFD47905.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T17]
gi|289691547|gb|EFD58976.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T92]
gi|289695053|gb|EFD62482.1| undecaprenyl diphosphate synthase [Mycobacterium tuberculosis
EAS054]
gi|289710033|gb|EFD74049.1| long chain (C50) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis GM 1503]
gi|289714049|gb|EFD78061.1| undecaprenyl diphosphate synthase [Mycobacterium tuberculosis T85]
gi|298495637|gb|EFI30931.1| undecaprenyl diphosphate synthase [Mycobacterium tuberculosis
94_M4241A]
gi|308214945|gb|EFO74344.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu001]
gi|308326721|gb|EFP15572.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu002]
gi|308330134|gb|EFP18985.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu003]
gi|308333995|gb|EFP22846.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu004]
gi|308337776|gb|EFP26627.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu005]
gi|308341457|gb|EFP30308.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu006]
gi|308344943|gb|EFP33794.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu007]
gi|308349254|gb|EFP38105.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu008]
gi|308353874|gb|EFP42725.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu009]
gi|308357819|gb|EFP46670.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu010]
gi|308361765|gb|EFP50616.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu011]
gi|308365410|gb|EFP54261.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu012]
gi|323719028|gb|EGB28176.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis CDC1551A]
gi|326903977|gb|EGE50910.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis W-148]
gi|328458329|gb|AEB03752.1| long-chain (C50)-Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis KZN 4207]
Length = 296
Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 88/234 (37%), Positives = 140/234 (59%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P+H+ I+MDGNGRWA RGL R GH+ G V +I A E+GIK L+++AF
Sbjct: 61 RIPADRLPNHVAIVMDGNGRWATQRGLARTEGHKMGEAVVIDIACGAIELGIKWLSLYAF 120
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + +++ +LKK +++R +G+R L ++ L AE+
Sbjct: 121 STENWKRSPEEVRFLMGFNRDVVRRRRDTLKKLGVRIRWVGSRPRLWRSVINELAVAEEM 180
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N + + NY R EI+ A + I +++ +G + + S IA++L D+PD D
Sbjct: 181 TKSNDVITINYCVNYGGRTEITEATREIAREVAAGRLNPERITESTIARHLQRPDIPDVD 240
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
L +RT GE+R S+F+LWQ AY+E++F + WPD+ R + A +Y R RRFG
Sbjct: 241 LFLRTSGEQRSSNFMLWQAAYAEYIFQDKLWPDYDRRDLWAACEEYASRTRRFG 294
>gi|145352831|ref|XP_001420739.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580974|gb|ABO99032.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 273
Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 91/247 (36%), Positives = 136/247 (55%), Gaps = 10/247 (4%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + P H+ IIMDGN RWA R LPR GH +G+ +V GI LT+F
Sbjct: 25 LRDLARDQVPRHVAIIMDGNSRWAERRRLPRTIGHERGVNALRGVVKCCVAWGISTLTVF 84
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW R +EI EL+ L+++ +++ L K ++V VIG+ +++ + + A
Sbjct: 85 AFSQENWGRNQAEIEELMALVETAMREELPLLVKEGVRVEVIGDLSKVNEGVRSAVTRAM 144
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD--- 178
+ T+ N L L +A +Y R +I +A K + Q + G + + D+D + ++ +L T D
Sbjct: 145 EATKDNDSLRLVVALSYGGRQDIVQAAKTLAQKVADGEMRAEDIDEAALSAHLSTYDARA 204
Query: 179 -------VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
PDL+IRT GE+RLS+FLLW +AY+E F +WP+F AL Y
Sbjct: 205 ATNEIDFAQAPDLLIRTSGEQRLSNFLLWDLAYTELYFAQMFWPEFGEAELRRALYAYAK 264
Query: 232 RDRRFGG 238
RDRRFGG
Sbjct: 265 RDRRFGG 271
>gi|87199394|ref|YP_496651.1| undecaprenyl pyrophosphate synthetase [Novosphingobium
aromaticivorans DSM 12444]
gi|87135075|gb|ABD25817.1| Undecaprenyl pyrophosphate synthetase [Novosphingobium
aromaticivorans DSM 12444]
Length = 236
Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 96/227 (42%), Positives = 141/227 (62%), Gaps = 8/227 (3%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA R +PR GH++G++ EI AA ++G++ LT++AFS NW+RP
Sbjct: 17 RHVAIIMDGNGRWAKKRMMPRAFGHKRGVDTVREIARAARDMGLEALTLYAFSSENWKRP 76
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
EI++L+ L+++F++ NN ++R+IG+ +L DI+ ++++A +T NTG
Sbjct: 77 ADEIADLMGLLRTFIRNDLDEFVANNTRLRIIGDYQALAPDIVQMIEDAMARTAGNTGTT 136
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L IA NY S+ EI+RA + + I LDT+ +P DL+IRT GE
Sbjct: 137 LAIALNYGSQQEIARAAARAAEKGA--------ITPEAIEAELDTACLPPLDLLIRTSGE 188
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
RLS+FLLWQ AY+E F WPDF+ AL+Q+ R+RRFGG
Sbjct: 189 IRLSNFLLWQAAYAEMWFTDVLWPDFTAAHLRDALDQFTSRERRFGG 235
>gi|42527845|ref|NP_972943.1| undecaprenyl diphosphate synthase [Treponema denticola ATCC 35405]
gi|73920284|sp|Q73K76|UPPS_TREDE RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|41818673|gb|AAS12862.1| undecaprenyl diphosphate synthase [Treponema denticola ATCC 35405]
Length = 227
Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 94/226 (41%), Positives = 130/226 (57%), Gaps = 6/226 (2%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
HI I+MDGNGRWA RGLPR GH++G+ I A +++GI +T++ FS NW+R
Sbjct: 6 KHIAIVMDGNGRWAKKRGLPRSMGHKEGLNTVKRITKAVSDLGIPYITLYIFSTENWKRT 65
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
+E+ L+ LIK LK NNI++ IGN L DI + D+T TG
Sbjct: 66 EAEVGFLMGLIKQHLKAELKFYADNNIRIEHIGNLSGLPQDIQDEINSVRDKTSAYTGTA 125
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+ + NY + DEI RAIK + D + ++ + LDT +P DL+IRTGGE
Sbjct: 126 IVLGINYGAHDEILRAIKKLNSDELAS------INEESFSLKLDTGKIPPVDLLIRTGGE 179
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
KRLS+FLLWQ AY+E F WPD++ E + A+ Y R+RR+G
Sbjct: 180 KRLSNFLLWQSAYAELYFTDTLWPDWTVENLYEAIEDYKKRNRRYG 225
>gi|227504558|ref|ZP_03934607.1| undecaprenyl diphosphate synthase [Corynebacterium striatum ATCC
6940]
gi|227198878|gb|EEI78926.1| undecaprenyl diphosphate synthase [Corynebacterium striatum ATCC
6940]
Length = 250
Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 81/237 (34%), Positives = 132/237 (55%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ P HI ++MDGNGRWA RG+ R GHR+G V ++V A + I L+ +AF
Sbjct: 14 AIPEEFLPKHIALVMDGNGRWAEERGMKRTEGHRRGEAVLLDVVDACLSMNIPYLSAYAF 73
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRR E+ L+ + L++ L + ++V +G R L ++ L+ A++
Sbjct: 74 STENWRRSPEEVRFLMAFNRDVLRRQREWLNEKGVRVVWVGRRPRLWRSVIKELETAQEL 133
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NT + L + NY R E+ ++ + + G + ++ + ++ L +PD D
Sbjct: 134 TKNNTRMTLAMCVNYGGRAELVDGVRKLADQVAKGELKPSAINEASLSAALYDPTMPDVD 193
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
L +R GEKR S+FLLWQ AY+E ++ + +PDF+ E + A+ +Y RDRRFGG
Sbjct: 194 LFLRPSGEKRTSNFLLWQSAYAEMIYQDKLFPDFTPEDLYAAVEEYARRDRRFGGTK 250
>gi|325474925|gb|EGC78111.1| undecaprenyl pyrophosphate synthetase [Treponema denticola F0402]
Length = 227
Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 94/226 (41%), Positives = 130/226 (57%), Gaps = 6/226 (2%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
HI I+MDGNGRWA RGLPR GH++G+ I A +++GI +T++ FS NW+R
Sbjct: 6 KHIAIVMDGNGRWAKKRGLPRSMGHKEGLNTVKRITKAVSDLGIPYITLYIFSTENWKRT 65
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
+E+ L+ LIK LK NNI++ IGN L DI + D+T TG
Sbjct: 66 EAEVGFLMGLIKQHLKAELKFYADNNIRIEHIGNLSGLPQDIQDEINSVRDKTSAYTGTA 125
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+ + NY + DEI RAIK + D + ++ + LDT +P DL+IRTGGE
Sbjct: 126 IVLGINYGAHDEILRAIKKLNSDEIAS------INEESFSLKLDTGKIPPVDLLIRTGGE 179
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
KRLS+FLLWQ AY+E F WPD++ E + A+ Y R+RR+G
Sbjct: 180 KRLSNFLLWQSAYAELYFTDTLWPDWTVENLYEAIEDYKKRNRRYG 225
>gi|294503066|ref|YP_003567128.1| undecaprenyl pyrophosphate synthetase [Yersinia pestis Z176003]
gi|262361103|gb|ACY57824.1| undecaprenyl pyrophosphate synthetase [Yersinia pestis D106004]
gi|294353525|gb|ADE63866.1| undecaprenyl pyrophosphate synthetase [Yersinia pestis Z176003]
Length = 230
Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 83/223 (37%), Positives = 129/223 (57%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA +G R GH+ G++ V+ AA+ + LT++AFS NW RP E++
Sbjct: 1 MDGNGRWAKNKGKLRVFGHKAGVKSVRRAVSFAAKHNLDALTLYAFSSENWNRPDQEVTA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L L SL K+N+++ +IG+ + ++ +E T N GL L IA N
Sbjct: 61 LMELFVRALDSEVKSLHKHNVRLSIIGDISRFSGRLQERIRRSEKLTANNDGLKLNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I + ++++ + ++ G + D+ + Y+ + DL+IRTGGE R+S+F
Sbjct: 121 YGGRWDIIQGVRHLAEQVQKGELQPTDISEESLNSYICLHEQSQVDLVIRTGGEHRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LLWQ+AY+E F WPDF +F ALN + R+RRFGG +
Sbjct: 181 LLWQIAYAELYFTDVLWPDFDENVFEGALNAFAQRERRFGGTT 223
>gi|281492791|ref|YP_003354771.1| undecaprenyl pyrophosphate synthetase [Lactococcus lactis subsp.
lactis KF147]
gi|281376443|gb|ADA65929.1| Undecaprenyl pyrophosphate synthetase [Lactococcus lactis subsp.
lactis KF147]
gi|326407714|gb|ADZ64785.1| undecaprenyl pyrophosphate synthetase [Lactococcus lactis subsp.
lactis CV56]
Length = 244
Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 95/235 (40%), Positives = 133/235 (56%), Gaps = 8/235 (3%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P+HIGIIMDGNGRWA +G PR GH+ G++ ++ A GIK +T++AFS NW
Sbjct: 14 LPEHIGIIMDGNGRWAKQKGKPRIFGHKAGMDSLKDVAVHGARRGIKVMTVYAFSTENWT 73
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RPV E+ ++ L F K LK+ NI++R+IG R L L + A +T N G
Sbjct: 74 RPVDEVKFIMSLPIDFYSKYVPVLKEENIQIRMIGEREGLPKATLDSIDRAAQETSENDG 133
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLI 185
+ L A NY R +I AI+ + + ++K+L T+ +P DPDLI
Sbjct: 134 MILNFAMNYGGRRDIILAIQELA----KSGQDLSLLTEEELSKHLQTAVLPENLRDPDLI 189
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IRT GE+R+S+FL WQ AYSE F WPDF + A++ + RDRR+GG+
Sbjct: 190 IRTSGEQRMSNFLTWQSAYSELYFAQTAWPDFDDKELDKAISAFQKRDRRYGGVK 244
>gi|212715507|ref|ZP_03323635.1| hypothetical protein BIFCAT_00405 [Bifidobacterium catenulatum DSM
16992]
gi|212661589|gb|EEB22164.1| hypothetical protein BIFCAT_00405 [Bifidobacterium catenulatum DSM
16992]
Length = 263
Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 87/241 (36%), Positives = 143/241 (59%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + P HIG+IMDGNGRWA RGL R GH+ V + +A A E G++ L++
Sbjct: 23 IIPDFPKNKVPRHIGVIMDGNGRWAQQRGLIRTDGHQAAEPVVFDTIAGAIEAGVRYLSL 82
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW+R E+ L+ + + + + + ++VR G R L ++ L++A
Sbjct: 83 YTFSTENWKRSPQEVRFLMGFSRDIIHRRVEQMNEWGVRVRWSGRRPKLWKSVIDELEKA 142
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+++T+ NT +++ NY R EI+ A I +++ G + V +IA++L D+P
Sbjct: 143 QERTKNNTIIDVVFCLNYGGRAEIADACAAIAKEVRDGKISGDRVTEKMIAEHLYNPDIP 202
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
D DL+IRT GE+R S+FL W+ AY+E F+PE +PD R++ + +++ Y RDRRFGG+
Sbjct: 203 DCDLVIRTSGEQRTSNFLPWEAAYAELDFVPELFPDCGRDVLWRSIDHYIHRDRRFGGVK 262
Query: 241 K 241
K
Sbjct: 263 K 263
>gi|152967317|ref|YP_001363101.1| undecaprenyl diphosphate synthase [Kineococcus radiotolerans
SRS30216]
gi|151361834|gb|ABS04837.1| undecaprenyl diphosphate synthase [Kineococcus radiotolerans
SRS30216]
Length = 256
Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 91/239 (38%), Positives = 137/239 (57%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P H+ I+MDGNGRWA RGLPR GH++G ++VA A EVG+ +++ +AF
Sbjct: 15 QLPAELVPRHVAIVMDGNGRWANQRGLPRVEGHKRGEASLLDVVAGAIEVGVTHVSAWAF 74
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + +++ + ++VR G R L ++ L+ AE+
Sbjct: 75 STENWKRSPDEVRFLMGFNRDVIRRRRDEMNSWGVRVRWAGRRPRLWRSVIDELEAAEEL 134
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NT L + NY R E++ A + I D+ +G++ VD +A+YLD D+PD D
Sbjct: 135 TKDNTVCTLTMCVNYGGRAELADAARAIALDVAAGTLNPARVDERTVARYLDEPDMPDVD 194
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L R+ GE+R S FL WQ AY+E VF WPD R + A+ Y RDRR+GG + K
Sbjct: 195 LFWRSSGEQRTSGFLPWQAAYAEMVFSDTLWPDVDRRTLWAAIETYAERDRRYGGAADK 253
>gi|118468831|ref|YP_888762.1| undecaprenyl pyrophosphate synthase [Mycobacterium smegmatis str.
MC2 155]
gi|118170118|gb|ABK71014.1| undecaprenyl diphosphate synthase [Mycobacterium smegmatis str. MC2
155]
Length = 293
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 86/235 (36%), Positives = 135/235 (57%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P+H+ ++MDGNGRWA RGL R GH+ G V +I A E+GIK+LT++AF
Sbjct: 58 KIPADQVPNHVAVVMDGNGRWATQRGLGRTEGHKMGEAVLIDITCGAIEIGIKHLTVYAF 117
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + +++ +L +++R +G+R + ++ AE
Sbjct: 118 STENWKRSTEEVRFLMGFNREVVRRRRENLNDMGVRMRWVGSRPRMWRSVIKEFDIAEQM 177
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T N + + NY R EI A + + Q+ G + + ++ AK+L +D+PD D
Sbjct: 178 TVDNDVITINYCVNYGGRTEIVEAARALAQEAVDGKINPARISEAMFAKHLHRADIPDVD 237
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L IRT GE+R S+FLLWQ AY+E+VF + WPD+ R + A +Y R+RRFG
Sbjct: 238 LFIRTSGEQRASNFLLWQAAYAEYVFQDKLWPDYDRRDLWAACEEYVNRNRRFGR 292
>gi|297571538|ref|YP_003697312.1| undecaprenyl diphosphate synthase [Arcanobacterium haemolyticum DSM
20595]
gi|296931885|gb|ADH92693.1| undecaprenyl diphosphate synthase [Arcanobacterium haemolyticum DSM
20595]
Length = 266
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 84/239 (35%), Positives = 139/239 (58%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ + + P H+ ++MDGNGRWA R LPR GHR G + +++A A E+G++ ++++AF
Sbjct: 23 AIPADAVPKHVAVVMDGNGRWANERHLPRTEGHRAGEKALMDVLAGAVEIGVEVVSVYAF 82
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R SEI+ L+ + + + + L +K+ G + L ++ L+EA+
Sbjct: 83 STENWKRSPSEIAFLMNYSRDVIHRRRHELDDWGVKIVWSGRQPRLWSSVIKELQEAQRL 142
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T N+ + L NY R EI+ A+ I G + ++ IA+ L +PD D
Sbjct: 143 TMYNSTMTLNFCCNYGGRAEIADAVAEIAAAAARGEIKPRKINEETIAQALYQPHLPDVD 202
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L IR+GGE+R S+F+LWQ +Y+E +F+ E WP+F R + + + QY R+RRFGG +
Sbjct: 203 LFIRSGGEQRTSNFMLWQASYAEMMFVDEPWPEFDRNVLWRCIEQYASRNRRFGGAVDQ 261
>gi|297242777|ref|ZP_06926715.1| undecaprenyl pyrophosphate synthetase [Gardnerella vaginalis AMD]
gi|296888988|gb|EFH27722.1| undecaprenyl pyrophosphate synthetase [Gardnerella vaginalis AMD]
Length = 264
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 85/239 (35%), Positives = 140/239 (58%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ P H+G+IMDGNGRWA RG+ R GH+ V +++A A E G++ L+++
Sbjct: 24 IPDFPKGKVPRHVGVIMDGNGRWAKERGMIRTEGHKAAEPVVFDVIAGAIEAGVRYLSLY 83
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
FS NW+R E+ L+ + + + + + ++VR G R L ++ L++A+
Sbjct: 84 TFSTENWKRSPQEVRFLMGFSREIIHRRVAQMNEWGVRVRWAGRRPRLWKSVIDELEKAQ 143
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ T+ N +++ NY R EI+ A I ++I G + V +IA++L D+PD
Sbjct: 144 EITKNNKTIDVVFCINYGGRAEIADACAQIAKEIRDGKIKGDRVSEKMIAEHLYNPDIPD 203
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRT GE+R S+FL WQ +Y+E F+PE +PD+ RE + ++++Y RDRRFGG+
Sbjct: 204 CDLVIRTSGEQRTSNFLPWQASYAELDFVPELFPDYGREALWRSIDRYAHRDRRFGGVK 262
>gi|295394791|ref|ZP_06805006.1| di-trans,poly-cis-decaprenylcistransferase [Brevibacterium
mcbrellneri ATCC 49030]
gi|294972387|gb|EFG48247.1| di-trans,poly-cis-decaprenylcistransferase [Brevibacterium
mcbrellneri ATCC 49030]
Length = 258
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 84/238 (35%), Positives = 129/238 (54%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P H+ ++MDGNGRWA RGLPR GH+ G +++ A E+G+K L+ +AFS
Sbjct: 17 IPQHILPTHVAVVMDGNGRWANERGLPRTEGHKAGEASLLDVIYGAMEIGVKYLSAYAFS 76
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+R E+ L+ + +++ L +++ G R L ++ L++A++ T
Sbjct: 77 TENWKRSPEEVRFLMGFNRDVIRRRKEELHAAGVRIVWAGRRGRLWRSVIKELEDAQELT 136
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NT L L NY R E+ A+ +D +G + + + L D+PD DL
Sbjct: 137 KNNTALTLQFCVNYGGRAELVDAMNAAVEDAVAGRIKPGKLTERSLHSRLYNPDIPDVDL 196
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+R+ GE+R S+FLLWQ AY+E VF WPD R + A+ +Y RDRRFGG K
Sbjct: 197 FLRSSGEQRTSNFLLWQSAYAEMVFQNVLWPDVDRRTLWDAILEYAQRDRRFGGAVDK 254
>gi|148244196|ref|YP_001218890.1| undecaprenyl diphosphate synthase [Candidatus Vesicomyosocius
okutanii HA]
gi|146326023|dbj|BAF61166.1| undecaprenyl diphosphate synthase [Candidatus Vesicomyosocius
okutanii HA]
Length = 233
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 94/226 (41%), Positives = 136/226 (60%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
HI IIMDGNGRWA+ R LPR GH++GI+ +V A + IK LT+FAFS N R
Sbjct: 5 KHIAIIMDGNGRWASKRSLPRILGHQQGIQAVRNVVKACSIRSIKTLTLFAFSSENKNRS 64
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E+S L KL L++ L K+NIK+++IG+ I V + + NTGL
Sbjct: 65 TKEVSLLFKLFLDMLQQEVKKLNKHNIKLKIIGDMSLFPIKIQQVAIDTQAILASNTGLT 124
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L IA NY + +I++A + +G + ++D++ ++YL ++ P+ DL+IRT GE
Sbjct: 125 LIIAANYGGQWDITQAAIKAAKVAVAGDIKANDINVKNFSQYLSLANEPNVDLLIRTSGE 184
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
R+S+FLLW +AYSEF F WPDF++ A+N +N R+RRFG
Sbjct: 185 LRISNFLLWDIAYSEFYFTKTLWPDFNKSELEKAINSFNNRNRRFG 230
>gi|221639122|ref|YP_002525384.1| Undecaprenyl pyrophosphate synthetase [Rhodobacter sphaeroides
KD131]
gi|221159903|gb|ACM00883.1| Undecaprenyl pyrophosphate synthetase [Rhodobacter sphaeroides
KD131]
Length = 247
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 98/236 (41%), Positives = 147/236 (62%), Gaps = 3/236 (1%)
Query: 7 SSSPPD---HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ PP H+ IIMDGNGRWA RG PR GHR+G E EIV A+ +GI+ LT++AF
Sbjct: 9 ADPPPRRADHVAIIMDGNGRWAVDRGWPRLVGHRRGAERVREIVQASPGLGIRWLTVYAF 68
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + ++++ L K +++R IG+R LD + ++ E +
Sbjct: 69 STENWKRSTEEVLGLMSIFARYIEREADRLAKEGVRMRFIGDRTRLDAKLQRLMAGIETR 128
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N LNL +A NY RDE++RA + + QD+ +G + + + D + + LDT+ +PDPD
Sbjct: 129 TQHNQRLNLTVAINYGGRDELARAARLMCQDVAAGRLRAEEADEAALVARLDTAGMPDPD 188
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
L+IRT GE R S+FL WQ AY+E+ F P WPDF+ + ++ R+RRFGG+
Sbjct: 189 LVIRTSGETRTSNFLSWQSAYAEYEFTPTLWPDFTARELETIIGRFAARERRFGGV 244
>gi|4218154|emb|CAA10743.1| hypothetical protein [Anabaena variabilis ATCC 29413]
Length = 251
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 84/230 (36%), Positives = 136/230 (59%), Gaps = 1/230 (0%)
Query: 11 PDHIGIIMDGNGRWAAA-RGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P+ + +IMDGNGR +GLPR GH++G++ +++ + GI+ LT +AFS NW+
Sbjct: 22 PNTLTVIMDGNGRDGLNVQGLPRIMGHKRGVDALKDLLRCCRDWGIQALTAYAFSTENWK 81
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ L+ L + L++ + + N++++ +GN +L + + + + T+ N G
Sbjct: 82 RPQEEVEFLMTLFQRVLRQELREMVEENVQIQFVGNLAALPRSLQAEISRSMEATKNNRG 141
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ +A NY R EI +A + I Q ++ G + ++D + ++L T+ + DPDL+IRT
Sbjct: 142 IRFSVATNYGGRQEILQACRAIAQKVQQGLLQPDEIDEEVFERHLYTAGIADPDLLIRTS 201
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GE RLS+FLLWQ+AY E WPDF R F AL Y R+RRFG +
Sbjct: 202 GEMRLSNFLLWQMAYGEIYITDTLWPDFDRTEFHRALCAYQQRERRFGKV 251
>gi|285018795|ref|YP_003376506.1| undecaprenyl pyrophosphate synthase [Xanthomonas albilineans GPE
PC73]
gi|283474013|emb|CBA16514.1| probable undecaprenyl pyrophosphate synthase protein [Xanthomonas
albilineans]
Length = 253
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 99/242 (40%), Positives = 140/242 (57%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + +S S P H+ IIMDGNGRWA R PR GHR G N + E GI LT+
Sbjct: 1 MHSDSVSMSLPRHLAIIMDGNGRWAQRRRRPRMIGHRAGARAVNRTIDFCLERGIAALTL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW RP E+ L+KL L + L++ ++VR IG R + + +A
Sbjct: 61 FAFSSENWGRPQDEVDALMKLFLHALDREVDELQRRGVRVRFIGERARFAPSLCERMNQA 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E +TR N L+L IA +Y R +I++A + + D+ SG + +D ++ L +D+P
Sbjct: 121 EARTRDNQALHLSIAASYGGRQDIAQAARALAADVASGRLRPEQIDEDALSARLALADLP 180
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
PDL IRTGG+ R+S+FLLWQ+AY+E F WP+F ++ HAL+ Y R+RRFG S
Sbjct: 181 PPDLFIRTGGDLRISNFLLWQMAYTELWFTETLWPEFDAQVLQHALDDYARRERRFGLTS 240
Query: 241 KK 242
+
Sbjct: 241 SQ 242
>gi|261337459|ref|ZP_05965343.1| di-trans,poly-cis-decaprenylcistransferase [Bifidobacterium
gallicum DSM 20093]
gi|270277852|gb|EFA23706.1| di-trans,poly-cis-decaprenylcistransferase [Bifidobacterium
gallicum DSM 20093]
Length = 262
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 83/240 (34%), Positives = 139/240 (57%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + P H+G+IMDGNGRWA RG+ R GH+ V + +A A E G++ L++
Sbjct: 23 IIPDFPKKAVPRHVGVIMDGNGRWAQQRGMIRTQGHQAAEPVVFDTIAGAIEAGVRYLSL 82
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW+R E+ L+ + +++ + + ++VR G R L ++ L+ A
Sbjct: 83 YTFSTENWKRSPQEVRFLMGFSRDIIRRRVKQMNEWGVRVRWSGRRPKLWKSVIDELESA 142
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ T+ N+ +++ NY R EI+ A I +++ G + V ++A++L D+P
Sbjct: 143 MEITKHNSVIDVVFCINYGGRAEIADACAAIAREVRDGKISGDRVTEKMVAEHLYNPDIP 202
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
D DL+IRT GE+R S+FL W+ AY+E F+PE +PD R + + A++ Y RDRRFGG+
Sbjct: 203 DCDLVIRTSGEQRTSNFLPWEAAYAELEFVPELFPDCGRNVLWRAIDDYIHRDRRFGGVK 262
>gi|254819381|ref|ZP_05224382.1| hypothetical protein MintA_05625 [Mycobacterium intracellulare ATCC
13950]
Length = 289
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 89/234 (38%), Positives = 136/234 (58%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P+H+ I+MDGNGRWA +GL R GHR G V +IV A E+GIK L+++AF
Sbjct: 54 RIEADRLPNHVAIVMDGNGRWATQQGLTRTDGHRAGEAVVIDIVCGAIEIGIKWLSLYAF 113
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + ++ +L +K+R +G+R L ++ L AED
Sbjct: 114 STENWKRSPEEVRFLMGFNRDVVRMRRVNLNAIGVKIRWVGSRPRLWRSVINELAIAEDM 173
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N + + NY R EI+ A K I + +G + + S +A +L D+PD D
Sbjct: 174 TKDNDVITVNYCVNYGGRAEIAEATKEIARLAAAGRLNPERITESTVANHLQRPDIPDVD 233
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
L +RT GE+R S+F+LWQ AY+E++F + WPD+ R + A +Y R+RRFG
Sbjct: 234 LFLRTSGEQRSSNFMLWQAAYAEYIFQDKLWPDYDRRDLWAACEEYASRNRRFG 287
>gi|317132573|ref|YP_004091887.1| undecaprenyl diphosphate synthase [Ethanoligenens harbinense
YUAN-3]
gi|315470552|gb|ADU27156.1| undecaprenyl diphosphate synthase [Ethanoligenens harbinense
YUAN-3]
Length = 245
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 95/229 (41%), Positives = 141/229 (61%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI I MDGN RWA +PR AGH G E F I ++G++ LT++AFS NW+
Sbjct: 16 LPVHIAIKMDGNRRWAKQHHVPRQAGHVAGSEAFKTIARYCNKIGVQYLTVYAFSSENWK 75
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+S L+ L++ L+ + NI+ R IG+R LD ++ ++ E E+ + TG
Sbjct: 76 RSEDEVSGLMSLLRKNLRDVLTIFRDENIRTRFIGDRTRLDAELQALMAETEEVSENRTG 135
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L IA NY R E+ A + I +D+ +G++ VD++++A +L+T+ PDPDL+I G
Sbjct: 136 LRLNIAINYGGRPELVAAARAIAEDVRAGTLAPEAVDANVLASHLETAGQPDPDLVIMPG 195
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
EKR+S+FLLWQ AY+E+ F WPDF+ ++ A+ +N R RRFGG
Sbjct: 196 AEKRISNFLLWQSAYAEYWFSDVLWPDFTPDVLEQAIADFNTRKRRFGG 244
>gi|227833626|ref|YP_002835333.1| Undecaprenyl pyrophosphate synthase [Corynebacterium aurimucosum
ATCC 700975]
gi|262184629|ref|ZP_06044050.1| Undecaprenyl pyrophosphate synthase [Corynebacterium aurimucosum
ATCC 700975]
gi|227454642|gb|ACP33395.1| Undecaprenyl pyrophosphate synthase [Corynebacterium aurimucosum
ATCC 700975]
Length = 250
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 84/237 (35%), Positives = 136/237 (57%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ P HI ++MDGNGRWA RG+ R GHR+G V ++V A +G+ L+ +AF
Sbjct: 14 AIPQEFLPRHIALVMDGNGRWAEERGMKRTEGHRRGEAVLLDVVDACLALGVPYLSAYAF 73
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRR E+ L+ + L++ + L + ++V G R L ++ L+ AE+
Sbjct: 74 STENWRRSAEEVRFLMGFNRDVLRRQRHWLNERGVRVVWAGRRPRLWRSVIKELEAAEEL 133
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NT + L + NY R E+ I+ + + + G + ++ +++ + D+PD D
Sbjct: 134 TKDNTKMTLVMCVNYGGRAELVDGIRELAEQVSRGELDPRSINEKMVSSVMYDPDMPDVD 193
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
L +R GEKR S+FLLWQ AY+E ++ + +PDF+ E F A+ +Y RDRRFGG+
Sbjct: 194 LFLRPSGEKRTSNFLLWQSAYAEMIYQDKLFPDFTPEDLFAAVEEYARRDRRFGGVK 250
>gi|326381620|ref|ZP_08203314.1| undecaprenyl diphosphate synthase [Gordonia neofelifaecis NRRL
B-59395]
gi|326199867|gb|EGD57047.1| undecaprenyl diphosphate synthase [Gordonia neofelifaecis NRRL
B-59395]
Length = 266
Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats.
Identities = 88/234 (37%), Positives = 133/234 (56%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P HI ++MDGNGRWA RGLPR GH++G V + V E+G+ +L+ +AF
Sbjct: 31 EIPAELVPRHIALVMDGNGRWAKERGLPRTEGHKRGEAVLMDSVCGCIEMGVTHLSAYAF 90
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW R E+ L+ + +++ + + ++VR G R L ++ L+ AE+
Sbjct: 91 STENWSRSPEEVKFLMGFNRDVIRRRRDEMNEMGVRVRWAGRRPKLWRSVIKELEVAEEL 150
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NT + L + NY R EI+ A + I + G + + + A+YLD D+PD D
Sbjct: 151 TEDNTVMTLTMCVNYGGRAEIADAAREIARRAARGEIDPERITEASFARYLDEPDMPDVD 210
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
L +R GE+RLS+FLLWQ AY+E V+ + +PDF R + A +Y RDRRFG
Sbjct: 211 LFLRPSGEQRLSNFLLWQSAYAEMVYQEKLFPDFDRRDLWAACLEYAKRDRRFG 264
>gi|42559861|sp|Q93AU4|UPPS_MYCPF RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|15983301|gb|AAL11543.1| undecaprenyl diphosphate synthase [Mycobacterium parafortuitum]
Length = 296
Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats.
Identities = 87/235 (37%), Positives = 134/235 (57%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P H+ ++MDGNGRWA RGL R GH+ G V +I A E+GIK+LT++AF
Sbjct: 61 QIPADQVPQHVAVVMDGNGRWATQRGLGRTEGHKMGEAVLIDITCGAIEIGIKHLTVYAF 120
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + +++ +L +++R +G+R + ++ AE
Sbjct: 121 STENWKRSTEEVRFLMGFNREVVRRRRENLNDMGVRMRWVGSRPRMWSSVIKEFDIAEQM 180
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T N + + NY R EI A + + Q+ G + + + + AK+L SD+PD D
Sbjct: 181 TVDNDVITINYCVNYGGRTEIVEAARELAQEAVDGKIKPNRISEAQFAKHLHRSDIPDVD 240
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L IRT GE+R S+FLLWQ AY+E+VF + WPD+ R + A +Y R+RRFG
Sbjct: 241 LFIRTSGEQRASNFLLWQAAYAEYVFQDKLWPDYDRRDLWAACEEYVQRNRRFGR 295
>gi|254774758|ref|ZP_05216274.1| undecaprenyl diphosphate synthase [Mycobacterium avium subsp. avium
ATCC 25291]
Length = 296
Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats.
Identities = 87/234 (37%), Positives = 136/234 (58%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P+H+ I+MDGNGRWA RG+ R GH+ G V +IV A E+GIK L+++AF
Sbjct: 61 RIPADRLPNHVAIVMDGNGRWATERGMSRTDGHKAGEAVVIDIVCGAIEIGIKWLSLYAF 120
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + ++ +L +K+R +G+R L ++ L AE+
Sbjct: 121 STENWKRSPEEVRFLMGFNRDVVRMRRVNLNTIGVKIRWVGSRPRLWRSVINELAIAEEM 180
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N + + NY R EI+ A K I + +G + + S +A +L D+PD D
Sbjct: 181 TKRNDVITVNYCVNYGGRAEIAEATKEIARLAAAGRLNPERITESTVAHHLQRPDIPDVD 240
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
L +RT GE+R S+F+LWQ AY+E++F + WPD+ R + A +Y R+RRFG
Sbjct: 241 LFLRTSGEQRSSNFMLWQAAYAEYIFQDKLWPDYDRRDLWAACQEYASRNRRFG 294
>gi|320108136|ref|YP_004183726.1| undecaprenyl diphosphate synthase [Terriglobus saanensis SP1PR4]
gi|319926657|gb|ADV83732.1| undecaprenyl diphosphate synthase [Terriglobus saanensis SP1PR4]
Length = 289
Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats.
Identities = 90/255 (35%), Positives = 145/255 (56%), Gaps = 14/255 (5%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ ++ + P+H+ IIMDGNGRWA R + R GH++G E + +V A+ + + LT+
Sbjct: 19 LYRTLDPTRIPEHVAIIMDGNGRWAGKRAMKRFRGHQQGAESVHFVVETASRINLPYLTL 78
Query: 61 FAFSINN-WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
+AFS+ N RRP SE+S L+KL++S+L ++ NN+++ IG L +++ ++
Sbjct: 79 YAFSLENNLRRPKSEVSFLMKLLRSYLVGNVKRMQDNNVRMAYIGRIHELPEEVQETMQW 138
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAI----KNIFQDIESGSVCSHD---------VD 166
AE +T NTG L +A NY SR EI A +N + + + D +
Sbjct: 139 AEAETAKNTGTTLTLALNYGSRCEIVDAARLTMQNTLAEAKRRGISVEDLLAVDEHAGIT 198
Query: 167 SSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHAL 226
++ + T +PDPDL+IRT GE R+S+FLLWQ+AY+E WPDF ++
Sbjct: 199 EDSLSAAMYTHALPDPDLLIRTSGEMRISNFLLWQIAYAELHVTDLLWPDFRGLHLLESI 258
Query: 227 NQYNLRDRRFGGLSK 241
++ RDRR+GG+ +
Sbjct: 259 AEFQRRDRRYGGIGQ 273
>gi|255569335|ref|XP_002525635.1| undecaprenyl pyrophosphate synthetase, putative [Ricinus communis]
gi|223535071|gb|EEF36753.1| undecaprenyl pyrophosphate synthetase, putative [Ricinus communis]
Length = 310
Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats.
Identities = 90/222 (40%), Positives = 134/222 (60%), Gaps = 2/222 (0%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ +IMDGNGRWA +G P GH G+ EI+ GIK LT+FAFS NW
Sbjct: 78 MPRHVAVIMDGNGRWAKQQGWPPSKGHEAGVRSLMEIMNLCGHWGIKVLTVFAFSCENWT 137
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP EI L+ L + LK +L + I+V +IG+ L + + +++E ED T+ +
Sbjct: 138 RPKVEIDFLMSLFERVLKSELENLLREGIRVSIIGDVSKLPESLQRLIREVEDTTKDYSK 197
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT--SDVPDPDLIIR 187
L+L +A +YS + ++ +A +NI ++ G++ D+ LI + L+T S+ P PDL+IR
Sbjct: 198 LHLLVAVSYSGKYDVVKACRNIAGRVKEGAIEPEDISEDLIEQELETNCSEHPSPDLLIR 257
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQY 229
T GE R+S+FLLWQ+AY+E F E WPDF ++ F AL +
Sbjct: 258 TSGELRISNFLLWQLAYTELYFAEELWPDFGKDGFVEALTSF 299
>gi|294791414|ref|ZP_06756571.1| di-trans,poly-cis-decaprenylcistransferase [Scardovia inopinata
F0304]
gi|294457885|gb|EFG26239.1| di-trans,poly-cis-decaprenylcistransferase [Scardovia inopinata
F0304]
Length = 263
Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats.
Identities = 85/234 (36%), Positives = 139/234 (59%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
P H+G+IMDGNGRWA RGL R GH+ V + +A A E G++ L+++ FS
Sbjct: 29 QGKVPQHVGVIMDGNGRWAQHRGLARTEGHKAAEPVVFDTIAGAIEAGVRYLSLYTFSTE 88
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW+R SE+ L+ + + + + + ++VR G R L ++ L+ A ++T+
Sbjct: 89 NWKRSPSEVRFLMGFSRDIIHRRVDQMNEWGVRVRWSGRRPRLWKSVIDELEVAMEKTKH 148
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NT +++ NY R E++ A I +++ G + V ++A++L D+PD DL+I
Sbjct: 149 NTVMDVVFCINYGGRAELADAAAQIAREVAEGKIKGDRVTEKMVAEHLYNPDIPDCDLVI 208
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RT GE+R S+FL W+ AY+E F+PE WPD R++ + ++++Y RDRRFGG+
Sbjct: 209 RTSGEQRTSNFLPWEAAYAELDFVPELWPDCGRQVLWRSIDRYCHRDRRFGGVK 262
>gi|41408239|ref|NP_961075.1| hypothetical protein MAP2141c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41396594|gb|AAS04458.1| hypothetical protein MAP_2141c [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 296
Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats.
Identities = 87/234 (37%), Positives = 136/234 (58%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P+H+ I+MDGNGRWA RG+ R GH+ G V +IV A E+GIK L+++AF
Sbjct: 61 RIPADRLPNHVAIVMDGNGRWATERGMSRTDGHKAGEAVVIDIVCGAIEIGIKWLSLYAF 120
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + ++ +L +K+R +G+R L ++ L AE+
Sbjct: 121 STENWKRSPEEVRFLMGFNRDVVRMRRVNLNTIGVKIRWVGSRPRLWRSVINELAIAEEM 180
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N + + NY R EI+ A K I + +G + + S +A +L D+PD D
Sbjct: 181 TKRNDVITVNYCVNYGGRAEIAEATKEIARLAAAGRLNPERITESTVAHHLQRPDIPDVD 240
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
L +RT GE+R S+F+LWQ AY+E++F + WPD+ R + A +Y R+RRFG
Sbjct: 241 LFLRTSGEQRSSNFMLWQAAYAEYIFQDKLWPDYDRRDLWAACQEYASRNRRFG 294
>gi|218665933|ref|YP_002425876.1| undecaprenyl diphosphate synthase [Acidithiobacillus ferrooxidans
ATCC 23270]
gi|218518146|gb|ACK78732.1| undecaprenyl diphosphate synthase [Acidithiobacillus ferrooxidans
ATCC 23270]
Length = 243
Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats.
Identities = 107/233 (45%), Positives = 155/233 (66%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI +IMDGNGRWA R LPR AGHR+G EV E+V + A++GI LT+FAFS NWR
Sbjct: 1 MPRHIAVIMDGNGRWAYRRHLPRVAGHRRGAEVVREMVQSCADLGIPYLTLFAFSTENWR 60
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ L+ L + L++ L +N +++R+IG+R +LD +I ++ EAE TR N
Sbjct: 61 RPAIEVRLLMNLFRLLLRREARKLHENGVRLRIIGDRSALDPEICQLIDEAEALTRNNQR 120
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L +A NY R +I++A + +++G + D ++ IA++L +D+P+PDL+IRTG
Sbjct: 121 LQLNLAVNYGGRWDIAQAARAAMAAVQAGDLALEDFSAAHIARHLCLADIPEPDLLIRTG 180
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE+R+S+FLLWQ+AY+EF F WPDF+R HAL+ + R RRFG +
Sbjct: 181 GEERISNFLLWQLAYTEFYFSDTLWPDFNRAALEHALHSFAHRQRRFGRTGDQ 233
>gi|269956963|ref|YP_003326752.1| undecaprenyl diphosphate synthase [Xylanimonas cellulosilytica DSM
15894]
gi|269305644|gb|ACZ31194.1| undecaprenyl diphosphate synthase [Xylanimonas cellulosilytica DSM
15894]
Length = 262
Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats.
Identities = 83/235 (35%), Positives = 136/235 (57%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S+ + P H+ ++MDGNGRWA RGL R GH+ G + ++VA A ++G+KN++ +AF
Sbjct: 19 SIPAELLPKHVAVVMDGNGRWANQRGLSRIEGHKAGEKQLLDVVAGAVQLGVKNISAYAF 78
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + +++ + +++R G L ++ L+ AE+
Sbjct: 79 STENWKRSPEEVKFLLGFNRDVIRRRRDEMGSWGVRIRWAGRTPRLWGSVIKELQVAEEM 138
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N L + NY R E++ A I +D+++G + + + KYL ++PD D
Sbjct: 139 TKGNDACTLTMCVNYGGRAELADAAAAIARDVKAGRLNPERISEKTLQKYLYVPELPDVD 198
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R+ GE+R S+F++WQ AY+E +FIPE WPD R + A Y RDRR+GG
Sbjct: 199 LFLRSSGEQRTSNFMVWQSAYAEMMFIPELWPDVDRRHLWKACEDYASRDRRYGG 253
>gi|118462927|ref|YP_881253.1| undecaprenyl pyrophosphate synthase [Mycobacterium avium 104]
gi|118164214|gb|ABK65111.1| undecaprenyl diphosphate synthase [Mycobacterium avium 104]
Length = 296
Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats.
Identities = 87/234 (37%), Positives = 136/234 (58%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P+H+ I+MDGNGRWA RG+ R GH+ G V +IV A E+GIK L+++AF
Sbjct: 61 RIPADRLPNHVAIVMDGNGRWATERGMSRTDGHKAGEAVVIDIVCGAIEIGIKWLSLYAF 120
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + ++ +L +K+R +G+R L ++ L AE+
Sbjct: 121 STENWKRSPEEVRFLMGFNRDVVRMRRVNLNTIGVKIRWVGSRPRLWRSVINELAIAEEM 180
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N + + NY R EI+ A K I + +G + + S +A +L D+PD D
Sbjct: 181 TKRNDVITVNYCVNYGGRAEIAEATKEIARLAAAGRLNPERITESTVAHHLQRPDIPDVD 240
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
L +RT GE+R S+F+LWQ AY+E++F + WPD+ R + A +Y R+RRFG
Sbjct: 241 LFLRTSGEQRSSNFMLWQAAYAEYIFQDKLWPDYDRRDLWAACQEYASRNRRFG 294
>gi|29839943|ref|NP_829049.1| undecaprenyl diphosphate synthase [Chlamydophila caviae GPIC]
gi|42559795|sp|Q824H0|UPPS_CHLCV RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|29834290|gb|AAP04927.1| undecaprenyl diphosphate synthase [Chlamydophila caviae GPIC]
Length = 250
Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats.
Identities = 96/235 (40%), Positives = 132/235 (56%), Gaps = 4/235 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARG----LPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S P H+ IIMDGN RW L + +GH G + I+ +A +GI+ LT+FAF
Sbjct: 16 QSLPRHVAIIMDGNRRWHQQHQTQCTLKQTSGHYYGAKALPSIIESAFSLGIEVLTLFAF 75
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S N+ R E+ EL L S L + F L +N I++R IGN +L + + E +
Sbjct: 76 STENFLRSTEEVEELFSLFHSQLDEQFPYLIENKIRLRCIGNLSALPLQLQQKISEISLK 135
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T N+ +L +A NY +DE+ RA K + QD+ + S + LI YLDTS++PDPD
Sbjct: 136 THQNSHRDLVLAINYGGKDELVRAFKKLHQDLVEQKISSDSISEELIRLYLDTSEMPDPD 195
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L+IRTGGE R+S+FLLWQ+AY+E WPDF F A+ Y R RR G
Sbjct: 196 LLIRTGGEMRVSNFLLWQIAYTELYVTDILWPDFKPNHFLDAIKAYQHRSRRGGR 250
>gi|25028738|ref|NP_738792.1| putative undecaprenyl diphosphate synthase [Corynebacterium
efficiens YS-314]
gi|42559989|sp|Q8FNG2|UPPS2_COREF RecName: Full=Undecaprenyl pyrophosphate synthase 2; Short=UPP
synthase 2; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase 2;
AltName: Full=Undecaprenyl diphosphate synthase 2;
Short=UDS 2
gi|23494024|dbj|BAC18992.1| putative undecaprenyl diphosphate synthase [Corynebacterium
efficiens YS-314]
Length = 243
Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats.
Identities = 87/234 (37%), Positives = 135/234 (57%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ + P HI ++MDGNGRWA +G+ R GHR+G V ++V A +G+ L+ +AF
Sbjct: 8 NIPAEFLPRHIALVMDGNGRWATEKGMKRTEGHRRGEAVLLDVVDACLALGVPYLSAYAF 67
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRR E+ L+ + L++ L + ++VR +G R L ++ L+ AE+
Sbjct: 68 STENWRRSTEEVRFLMGFNRDVLRRQRDGLHEKGVRVRWVGRRPRLWRSVIRELEAAEEL 127
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NT + L + NY R EI A + I + +G + ++ +LD D+PD D
Sbjct: 128 TKDNTNMTLAMCVNYGGRAEIIDAAREIARQAAAGQLRPEQINEKTFPDFLDEPDMPDVD 187
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
L +R GEKR S+FLLWQ AY+E V+ + +PDF+ + F A+ +Y RDRRFG
Sbjct: 188 LFLRPSGEKRTSNFLLWQSAYAEMVYQDKLFPDFTPQDLFDAVEEYARRDRRFG 241
>gi|27904718|ref|NP_777844.1| undecaprenyl pyrophosphate synthetase [Buchnera aphidicola str. Bp
(Baizongia pistaciae)]
gi|42559807|sp|Q89AP0|UPPS_BUCBP RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|27904115|gb|AAO26949.1| undecaprenyl pyrophosphate synthetase [Buchnera aphidicola str. Bp
(Baizongia pistaciae)]
Length = 251
Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats.
Identities = 94/234 (40%), Positives = 138/234 (58%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ P H+ IIMDGNG+WA RG R GH G ++ A +K LT++AFS +
Sbjct: 17 KKNIPSHVAIIMDGNGKWARKRGKSRFFGHFSGFYAARRAISFALFHKLKILTLYAFSSD 76
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW R EI L++L L +L K NI+++VIGN+ + + ++ E +T
Sbjct: 77 NWNRSPREIKVLMELFFYALSNETNNLNKYNIRLKVIGNKEKFNTVLKNKIRVVEKETLK 136
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTGL L IA NYS R EI AIK I I+ ++ + + S ++ +L ++ DL+I
Sbjct: 137 NTGLLLNIAANYSGRWEILEAIKKIVVAIKCKNLSLNAITESTVSDFLLINEKIPVDLVI 196
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RTGGE RLS+FL+WQ++YSE F WPDF R+ F A+++++ R+RRFG +S
Sbjct: 197 RTGGECRLSNFLVWQISYSELYFTNTLWPDFDRKEFKKAIDEFSNRERRFGRVS 250
>gi|302553872|ref|ZP_07306214.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces
viridochromogenes DSM 40736]
gi|302471490|gb|EFL34583.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces
viridochromogenes DSM 40736]
Length = 257
Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats.
Identities = 84/238 (35%), Positives = 128/238 (53%), Gaps = 7/238 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HIG+IMDGN RWA A G GHR G E + +E ++ +T++ S
Sbjct: 23 LDHAQVPKHIGVIMDGNRRWAKAAGSSTVDGHRAGAGKIEEFLGWCSETDVEVVTLWLLS 82
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
+N+ RP E+ L+ +I+ ++ +V +G L + VLKEAE+ T
Sbjct: 83 TDNFDRPQEELGPLLGIIEDVVRTL---AADGRWRVHHVGTPDLLPSGMQTVLKEAEETT 139
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDS----SLIAKYLDTSDVP 180
G+ + +A Y R EI+ A++++ D + ++ +I ++L TSD P
Sbjct: 140 AHVDGILVNVAIGYGGRQEIADAVRSMLLDAQERGTSMEELTEAVDTDMIGRHLYTSDQP 199
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DPDL+IRT GE+RLS F+LWQ A+SE+ F +WP F + F A+ Y R RRFGG
Sbjct: 200 DPDLVIRTSGEQRLSGFMLWQTAHSEYYFCDVFWPAFRKVDFLRAMRDYAARHRRFGG 257
>gi|297620558|ref|YP_003708695.1| undecaprenyl pyrophosphate synthetase [Waddlia chondrophila WSU
86-1044]
gi|297375859|gb|ADI37689.1| undecaprenyl pyrophosphate synthetase [Waddlia chondrophila WSU
86-1044]
Length = 258
Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats.
Identities = 82/237 (34%), Positives = 131/237 (55%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + +S P H+ +I DGN RWA + GH+ G + I+ A ++GI+ LT F
Sbjct: 21 LEELHASPIPKHVALIPDGNRRWAKKHCILPEQGHKLGADSLLNIIKAGHQIGIETLTFF 80
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
FS NW RP EI+ +KL++ L + +N ++ R IG+ ++ ++ E
Sbjct: 81 IFSTENWLRPKKEINAQMKLLEKSLTLQKPRMLENGVRFRPIGDLSKFPPYLIELINRTE 140
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T +N+ A NY RD+I RA + E ++ +LI++YLDT + D
Sbjct: 141 QETAHLDNINVVFAMNYGGRDDIKRAFIKMLNAYEHRIFTKEEISENLISEYLDTCEWSD 200
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PDL+IRT GE R+S+FLLWQ++Y+E ++WP+FS F A+ ++ R+RR GG
Sbjct: 201 PDLLIRTSGESRISNFLLWQLSYAEIYLTKKHWPEFSPRDFLEAVIEFQHRERRLGG 257
>gi|300934080|ref|ZP_07149336.1| hypothetical protein CresD4_08419 [Corynebacterium resistens DSM
45100]
Length = 278
Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats.
Identities = 82/242 (33%), Positives = 129/242 (53%), Gaps = 7/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGL-PRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ + P H+ I+ DGN RWA G GHR G + E+ + E+GI N+T
Sbjct: 38 LARELRDKPQPQHVAIMADGNRRWARENGFTDVSHGHRVGAQKIAELCSWCDELGIPNVT 97
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++ S N +R E+S L +I ++ + + ++R +G L + + L++
Sbjct: 98 VYLLSTENLKRSEEELSLLCNIIGDVSEELAK--HECDFRLRCVGQLDLLPEPLRTRLED 155
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLD 175
+ T ++G+ + IA Y R EI A++ + +++ V + D+ + + +++
Sbjct: 156 NQKLTEKHSGVRVNIAVGYGGRQEIVDAVQKLVRELAGRGVAAEDIAAQITAEALGEHMY 215
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
TSD PDPDL+IRT GE+RLS FLLWQ AYSE F YWP F R F AL +Y+ R RR
Sbjct: 216 TSDQPDPDLVIRTSGEQRLSGFLLWQSAYSEIWFTDTYWPAFRRVDFLRALREYSQRHRR 275
Query: 236 FG 237
FG
Sbjct: 276 FG 277
>gi|238759943|ref|ZP_04621097.1| Di-trans,poly-cis-decaprenylcistransferase [Yersinia aldovae ATCC
35236]
gi|238701850|gb|EEP94413.1| Di-trans,poly-cis-decaprenylcistransferase [Yersinia aldovae ATCC
35236]
Length = 230
Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats.
Identities = 84/223 (37%), Positives = 128/223 (57%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA RG R GH+ G++ V+ AA + LT++AFS NW RP E++
Sbjct: 1 MDGNGRWAKNRGKLRVFGHKAGVKSVRRAVSFAATHHLDALTLYAFSSENWNRPAQEVTA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L L SL K+N+++ VIG+ + + ++ +E T N GL L IA N
Sbjct: 61 LMELFVRALDSEVKSLHKHNVRLSVIGDISRFSERLQERIRRSEALTANNDGLRLNIAAN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I + ++ + ++ G + D+ + ++ + + DL+IRTGGE R+S+F
Sbjct: 121 YGGRWDIIQGMRQLAAQVQRGELQPTDISEESLNSHICLHEQSEVDLVIRTGGEHRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LLWQ+AY+E F WPDF +F ALN + R+RRFGG +
Sbjct: 181 LLWQIAYAELYFTDVLWPDFDEHVFEGALNAFAQRERRFGGTT 223
>gi|291295196|ref|YP_003506594.1| undecaprenyl diphosphate synthase [Meiothermus ruber DSM 1279]
gi|290470155|gb|ADD27574.1| undecaprenyl diphosphate synthase [Meiothermus ruber DSM 1279]
Length = 280
Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats.
Identities = 87/242 (35%), Positives = 130/242 (53%), Gaps = 6/242 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + P H+G+I+DGN R+A GL GH G++ E++ E+ I +TI+
Sbjct: 39 AEVKKGHTPKHLGLILDGNRRFARELGLDSHQGHEFGVQKAYEVLEWCLELRIPTVTIWV 98
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FS +N+ R +E+ L++L K+ + N ++V+VIG +L L+E
Sbjct: 99 FSTDNFNRSQTEVETLMQLFVQEAKRMAHDPRIHANEVRVKVIGRHDRFPPKVLEALEEL 158
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDT 176
E T + G+ L IA Y R+EI A+K++ + ++ + L I++ L T
Sbjct: 159 EKATEHHNGMLLNIAMGYGGREEIVDAVKSLLLEAAQTGKSPEELAAELDLKHISERLYT 218
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
+ VPDPD IIRT GE RLS FLLWQ AYSE+ F +WP F + F A+ Y R+RRF
Sbjct: 219 AGVPDPDFIIRTSGEIRLSGFLLWQAAYSEYYFFDAFWPAFRKVDFLRAVRDYQKRERRF 278
Query: 237 GG 238
G
Sbjct: 279 GR 280
>gi|227504089|ref|ZP_03934138.1| undecaprenyl pyrophosphate synthetase [Corynebacterium striatum
ATCC 6940]
gi|227199323|gb|EEI79371.1| undecaprenyl pyrophosphate synthetase [Corynebacterium striatum
ATCC 6940]
Length = 256
Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats.
Identities = 81/243 (33%), Positives = 123/243 (50%), Gaps = 7/243 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ ++ P H+ I+ DGN RWA G GHR+G + +E+++ + I+ +T
Sbjct: 16 LARAIKGKPQPRHVAIMADGNRRWAREAGFTDISHGHRQGAKKISEMISWCKDTDIEVVT 75
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
I+ S N +R E+ L +I +K I++ +G+ L ++ ++
Sbjct: 76 IYLLSTENLKRSTQEVQLLFDIISDVVKHLSEGDLDCQIRL--VGHLDLLPAEVTEKMRA 133
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLD 175
A T N G+ + IA Y R EI A++N+ +D + ++ + I +L
Sbjct: 134 AAQATEDNKGVIVNIAVGYGGRQEIVDAVQNLIRDEAQKGHSTEEIADSVTADAITSHLY 193
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
T +PDPDL+IRT GE+RLS FLLWQ AYSE F YWP F R F AL Y+ R RR
Sbjct: 194 TKGLPDPDLVIRTSGEQRLSGFLLWQAAYSEIWFTDTYWPAFRRVDFLRALRDYSQRSRR 253
Query: 236 FGG 238
FG
Sbjct: 254 FGK 256
>gi|296166315|ref|ZP_06848752.1| undecaprenyl diphosphate synthase [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295898324|gb|EFG77893.1| undecaprenyl diphosphate synthase [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 305
Score = 261 bits (668), Expect = 6e-68, Method: Composition-based stats.
Identities = 88/234 (37%), Positives = 137/234 (58%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P+H+ I+MDGNGRWA +GL R GHR G V ++V A E+GIK L+++AF
Sbjct: 70 RIPADRLPNHVAIVMDGNGRWATEQGLTRTDGHRAGEAVVIDVVCGAIEIGIKWLSLYAF 129
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + ++ +LK +K+R +G+R L ++ L AED
Sbjct: 130 STENWKRSPEEVRFLMGFNRDVVRMRRVNLKTIGVKIRWVGSRPRLWRSVINELAIAEDM 189
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N + + NY R EI+ A + I + +G + V + +A +L D+PD D
Sbjct: 190 TKDNDVITVNYCVNYGGRAEIADAAREIARLAAAGRLNPERVTEATVAHHLQRPDIPDVD 249
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
L +RT GE+R S+F+LWQ AY+E++F + WPD+ R + A +Y R+RRFG
Sbjct: 250 LFLRTSGEQRSSNFMLWQAAYAEYIFQDKLWPDYDRRDLWAACEEYASRNRRFG 303
>gi|294624554|ref|ZP_06703231.1| undecaprenyl pyrophosphate synthetase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292601160|gb|EFF45220.1| undecaprenyl pyrophosphate synthetase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 253
Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats.
Identities = 91/236 (38%), Positives = 135/236 (57%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+++ P HI IIMDGNGRWA R PR GHR G N + + + LT+FAFS
Sbjct: 7 AANVPRHIAIIMDGNGRWAQRRRRPRVIGHRAGARAVNRTIDFCLKKRVSALTLFAFSSE 66
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP E+ L+KL L + L++ ++VR IG+R + + AE T
Sbjct: 67 NWGRPQDEVDALMKLFLHALDREVEELQRRGVQVRFIGDRSRFAAPLRDRMAGAERSTAA 126
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N+ L L IA +Y R +I+ A + + +D+ +G + +D +L++ + +D+P PDL I
Sbjct: 127 NSRLVLSIAASYGGRQDIAAAARALAEDVAAGRLQPEQIDEALLSSRVALADLPAPDLFI 186
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGG+ R+S+FLLWQ+AY+E F WP+F + AL+ Y R+RRFG S +
Sbjct: 187 RTGGDTRISNFLLWQLAYTELWFTETLWPEFDAGVLQQALDDYAGRERRFGLTSAQ 242
>gi|90022238|ref|YP_528065.1| undecaprenyl pyrophosphate synthetase [Saccharophagus degradans
2-40]
gi|89951838|gb|ABD81853.1| Undecaprenyl pyrophosphate synthetase [Saccharophagus degradans
2-40]
Length = 249
Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats.
Identities = 88/231 (38%), Positives = 132/231 (57%), Gaps = 1/231 (0%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGN RWA G AGH+ G+E +++AA G++ LT+FAFS NWRRP
Sbjct: 12 RHVAIIMDGNNRWAKREGKQGIAGHKAGVERIRDVLAACRAQGVEVLTLFAFSSENWRRP 71
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E+ L+ L S+LKK L + + +RVIGNR +L ++EAE T +
Sbjct: 72 PIEVEALMGLFYSYLKKEARKLAEEGVALRVIGNRSRFSKSLLRAIEEAES-TASDGDAT 130
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L IA +Y +I+ + + + + G + +D ++ ++ T+ +P DL+IRTGGE
Sbjct: 131 LVIAADYGGCWDIANSARQLAEAAVRGDITPEQIDEHALSNHIQTAGLPPLDLLIRTGGE 190
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
R+S+FLLWQ AY+E F WPDF ++ A+ ++ R RRFG S +
Sbjct: 191 LRISNFLLWQAAYAELYFSDLLWPDFGKDALDEAVADFHRRQRRFGKTSDQ 241
>gi|229817203|ref|ZP_04447485.1| hypothetical protein BIFANG_02463 [Bifidobacterium angulatum DSM
20098]
gi|229784992|gb|EEP21106.1| hypothetical protein BIFANG_02463 [Bifidobacterium angulatum DSM
20098]
Length = 263
Score = 261 bits (667), Expect = 7e-68, Method: Composition-based stats.
Identities = 86/240 (35%), Positives = 140/240 (58%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + P H+G+IMDGNGRWA RGL R GH+ V + +A A E G++ L+++
Sbjct: 24 IPDFPKNKVPRHVGVIMDGNGRWAQQRGLIRTDGHQAAEPVVFDTIAGAIEAGVRYLSLY 83
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
FS NW+R E+ L+ + + + + + ++VR G R L ++ L+ A+
Sbjct: 84 TFSTENWKRSPQEVRFLMGFSRDIIHRRVDQMNEWGVRVRWSGRRPKLWKSVIDELEVAQ 143
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T+ N +++ NY R EI+ A I +++ G + V +IA++L D+PD
Sbjct: 144 EKTKKNKTIDVVFCLNYGGRAEIADACAAIAREVRDGKISGDRVTEKMIAEHLYNPDIPD 203
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRT GE+R S+FL W+ AY+E F+PE +PD RE+ + +++ Y RDRRFGG+ K
Sbjct: 204 CDLVIRTSGEQRTSNFLPWEAAYAELDFVPELFPDCGREVLWRSIDHYVHRDRRFGGVKK 263
>gi|224054548|ref|XP_002298315.1| predicted protein [Populus trichocarpa]
gi|222845573|gb|EEE83120.1| predicted protein [Populus trichocarpa]
Length = 242
Score = 261 bits (667), Expect = 7e-68, Method: Composition-based stats.
Identities = 92/241 (38%), Positives = 140/241 (58%), Gaps = 3/241 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPR-CAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ + P H+ +IMDGN +WA RG AGH G E+V + E GI+ LT
Sbjct: 1 LPEGLRREVMPRHVAVIMDGNAKWARQRGFSAASAGHEAGGRSLRELVKSCCEWGIRVLT 60
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
+FAFS +NW RP E+ L+ L + L+ + + I+V IG+ L + + ++ +
Sbjct: 61 VFAFSYDNWTRPKMEVVFLLSLFERMLQSELDNFMRKGIRVSTIGDSSRLPESLKKLISD 120
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT--S 177
E++TR N L+L +A +YS + ++++A K+I ++ G V D+D SL+ + L+T +
Sbjct: 121 IEEKTRDNCRLHLILAVSYSGKYDVTQACKSIAHKVKDGIVQLEDIDESLLEQELETNCA 180
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
P PDL+IRT GE R+S+FLLWQ+AY+E F WPDF + F AL Y R RR+G
Sbjct: 181 QYPCPDLLIRTSGELRISNFLLWQLAYTELFFAEALWPDFGKAEFIEALTSYQQRQRRYG 240
Query: 238 G 238
G
Sbjct: 241 G 241
>gi|315655180|ref|ZP_07908081.1| di-trans,poly-cis-decaprenylcistransferase [Mobiluncus curtisii
ATCC 51333]
gi|315490435|gb|EFU80059.1| di-trans,poly-cis-decaprenylcistransferase [Mobiluncus curtisii
ATCC 51333]
Length = 260
Score = 261 bits (667), Expect = 7e-68, Method: Composition-based stats.
Identities = 95/226 (42%), Positives = 132/226 (58%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA A+GL R AGH G + +A A + G+K L+++AFS NW+R
Sbjct: 29 HVAIIMDGNGRWANAQGLNRTAGHEAGEYALMDTIAGAVDAGVKFLSVYAFSTENWKRSP 88
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+E+ L+ + L+ L ++VR G L +L L+ AED TR NTG L
Sbjct: 89 AEVKFLMGYSRRVLRSRRDELNAWGVRVRWSGREGRLWKSVLTELRAAEDLTRGNTGTQL 148
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+ NY R EI+ A + + Q + +G++ + + A+ L DVPD DL+IRT GE+
Sbjct: 149 IMCLNYGGRAEIADAARKLAQRVAAGTLNPERITETTFARELYLPDVPDVDLLIRTSGEQ 208
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R S+FL WQ AY+E VF PE WP++ R + L Y RDRRFGG
Sbjct: 209 RTSNFLPWQAAYAELVFAPEPWPEYGRAALWRDLLAYQHRDRRFGG 254
>gi|50842426|ref|YP_055653.1| undecaprenyl pyrophosphate synthetase [Propionibacterium acnes
KPA171202]
gi|282854114|ref|ZP_06263451.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
J139]
gi|50840028|gb|AAT82695.1| undecaprenyl pyrophosphate synthetase [Propionibacterium acnes
KPA171202]
gi|282583567|gb|EFB88947.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
J139]
Length = 268
Score = 261 bits (667), Expect = 7e-68, Method: Composition-based stats.
Identities = 86/227 (37%), Positives = 124/227 (54%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ I+MDGNGRWA RGL R GH +G + +++ A E+GI L+ +AFS NW+R
Sbjct: 32 QHVAIVMDGNGRWARQRGLRRTEGHARGEDALFDVIEGAIEMGIPYLSAYAFSTENWKRS 91
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E+ L+ + + + L +++R G R L ++ L+ AE Q+ NT L
Sbjct: 92 PDEVRWLMGFNRDVIHRRRDQLDAMGVRIRWAGRRPKLWKSVIKELESAEKQSADNTVLT 151
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L NY R EI A+++I + G + + +LD +VPD DL R+ GE
Sbjct: 152 LQFCVNYGGRAEIVDAVRDIARLTAEGKIDPDHITEKTFRTHLDEPEVPDVDLFWRSSGE 211
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+R S+FLLWQ AY+E VF WPD R + A+ +Y RDRRFGG
Sbjct: 212 QRTSNFLLWQSAYAEMVFSDVLWPDVDRRDLWAAVMEYAKRDRRFGG 258
>gi|325959853|ref|YP_004291319.1| Undecaprenyl pyrophosphate synthase [Methanobacterium sp. AL-21]
gi|325331285|gb|ADZ10347.1| Undecaprenyl pyrophosphate synthase [Methanobacterium sp. AL-21]
Length = 255
Score = 261 bits (667), Expect = 7e-68, Method: Composition-based stats.
Identities = 86/238 (36%), Positives = 132/238 (55%), Gaps = 3/238 (1%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARG-LPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
++ + P H+ IIMDGN R++ +G + GH++GI + + ++ I+ +T++
Sbjct: 17 RNLSPENMPKHVAIIMDGNRRFSRIQGNIDAIEGHKRGIGTLEKFLDWCVDLEIEIVTVY 76
Query: 62 AFSINNWRRPVSEISELVKLIKSFLK--KGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
AFSI N+ R E+ L+ L K + + KN ++++ +G L +D+ ++
Sbjct: 77 AFSIENFNRTEQEVRGLMNLFKENFEGIAKNEKIHKNKVRIKAVGKMELLPEDVRKAIEI 136
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV 179
AED T + IA Y R EI AIK I +D+E G V D+D L+ + L T+ +
Sbjct: 137 AEDSTADYHERLVNIAIGYDGRLEIVDAIKKIVKDVEDGKVQIDDIDEKLVNQNLYTAGL 196
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DP+LIIRT GE+RLS FLLWQ +YSE F WP+ + F AL Y R+RRFG
Sbjct: 197 DDPNLIIRTSGEERLSGFLLWQSSYSELYFCDSLWPELRKVDFLRALRSYQQRERRFG 254
>gi|283769063|ref|ZP_06341969.1| di-trans,poly-cis-decaprenylcistransferase [Bulleidia extructa
W1219]
gi|283104420|gb|EFC05797.1| di-trans,poly-cis-decaprenylcistransferase [Bulleidia extructa
W1219]
Length = 232
Score = 261 bits (667), Expect = 7e-68, Method: Composition-based stats.
Identities = 93/230 (40%), Positives = 136/230 (59%), Gaps = 2/230 (0%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+HI IIMDGNGRWA A+G R AGH G E I AA ++G+K+LT++AFS NW+R
Sbjct: 5 NHIAIIMDGNGRWAKAQGKIRTAGHLAGAENVRTISIAADQLGVKHLTLYAFSTENWKRS 64
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E+S ++KL F KK ++ +IG L VL EAE++++ N GL+
Sbjct: 65 QDEVSYIMKLPAIFFKKYMKEFIDRGFRMEIIGELDPLPKSTKQVLLEAEEESKRNAGLH 124
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L I NY + E A K Q + ++ +YL T ++P DL+IRT GE
Sbjct: 125 LSICMNYGGQSETVIAAKRYAQALRENPNL--ELTIENFHEYLLTKNLPPVDLMIRTSGE 182
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
+R+S++L WQ+AY+EF+F+ E WP+FS ++ + +Y RDRRFGG+ +
Sbjct: 183 QRISNYLPWQLAYAEFMFVQESWPEFSEDVLKRCMEEYVHRDRRFGGVKE 232
>gi|315656964|ref|ZP_07909849.1| undecaprenyl diphosphate synthase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|315492356|gb|EFU81962.1| undecaprenyl diphosphate synthase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 260
Score = 261 bits (667), Expect = 7e-68, Method: Composition-based stats.
Identities = 94/226 (41%), Positives = 131/226 (57%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA A+GL R AGH G + +A A E G+K L+++AFS NW+R
Sbjct: 29 HVAIIMDGNGRWANAQGLNRTAGHEAGEYALMDTIAGAVEAGVKFLSVYAFSTENWKRSP 88
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+E+ L+ + L+ L ++VR G L +L L+ AE TR NTG L
Sbjct: 89 AEVKFLMGYSRRVLRDRRDELNAWGVRVRWSGREGRLWKSVLTELRRAETLTRGNTGTQL 148
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+ NY R E++ A + + Q + +G++ + + A+ L DVPD DL+IRT GE+
Sbjct: 149 IMCLNYGGRAELADAARKLAQRVAAGTLNPERITETTFARELYLPDVPDVDLLIRTSGEQ 208
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R S+FL WQ AY+E VF PE WP++ R + L Y RDRRFGG
Sbjct: 209 RTSNFLPWQAAYAELVFAPEPWPEYGRAALWRDLLAYQHRDRRFGG 254
>gi|256396145|ref|YP_003117709.1| undecaprenyl diphosphate synthase [Catenulispora acidiphila DSM
44928]
gi|256362371|gb|ACU75868.1| undecaprenyl diphosphate synthase [Catenulispora acidiphila DSM
44928]
Length = 299
Score = 261 bits (667), Expect = 7e-68, Method: Composition-based stats.
Identities = 83/230 (36%), Positives = 135/230 (58%), Gaps = 1/230 (0%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVG-IKNLTIFAFSINNW 68
P H+ ++MDGNGRWA RGL R GH+ G ++V A ++G I +++ +AFS NW
Sbjct: 40 VPRHVALVMDGNGRWAKERGLSRIEGHKVGEASLFDVVEGAVQLGGITHISAYAFSTENW 99
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+R E+ L+ + +++ + + +++R G R L ++ L+ AE++T+ N
Sbjct: 100 KRSPEEVRFLMGFNRDTIRRRIGEMDELGVRIRWAGRRPRLWKSVIDELEWAEERTKDNK 159
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
L L + NY R EI+ A+ ++ +DI++G + ++ + +YL D+PD DL IR+
Sbjct: 160 LLTLTMCVNYGGRWEIADAMADMGRDIKAGRLDPSKINEKTVTRYLYEPDMPDVDLFIRS 219
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GE R S+FL+W+ AY+EFVF WPDF R + A + RDRR+GG
Sbjct: 220 SGEHRTSNFLMWESAYAEFVFDNTLWPDFDRTNLWRACESFAGRDRRYGG 269
>gi|83749794|ref|ZP_00946768.1| Undecaprenyl pyrophosphate synthetase [Ralstonia solanacearum
UW551]
gi|207743240|ref|YP_002259632.1| undecaprenyl pyrophosphate synthetase (upp
synthetase)(di-trans,poly-cis-decaprenylcistransferase)
(undecaprenyl diphosphate synthase) (uds) protein
[Ralstonia solanacearum IPO1609]
gi|83723551|gb|EAP70755.1| Undecaprenyl pyrophosphate synthetase [Ralstonia solanacearum
UW551]
gi|206594637|emb|CAQ61564.1| undecaprenyl pyrophosphate synthetase (upp
synthetase)(di-trans,poly-cis-decaprenylcistransferase)
(undecaprenyl diphosphate synthase) (uds) protein
[Ralstonia solanacearum IPO1609]
Length = 259
Score = 261 bits (667), Expect = 7e-68, Method: Composition-based stats.
Identities = 99/241 (41%), Positives = 146/241 (60%), Gaps = 2/241 (0%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+A ++ P H+ IIMDGNGRWA R LPR AGH +G++ +V AAA G++ LT+F
Sbjct: 7 LAVPDTADTPHHVAIIMDGNGRWATERHLPRMAGHSRGLDAVRAVVDAAANRGVRYLTLF 66
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP E+S L+KL + L++ L ++ ++RV+G+ + + I +++EAE
Sbjct: 67 AFSSENWRRPTEEVSFLMKLFMTALRREVSKLHESGFRLRVVGDLSAFNPRIQLLIREAE 126
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T N+GL + IA NY R +I +A++ + D + + I+ YL + +
Sbjct: 127 AKTAANSGLTVTIAANYGGRWDILQAMRALVAD--QPDIAPEAITEEAISPYLALAYASE 184
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL IRTGGE+R+S+F+LWQ+AYSE F YWPDF A Y R+RRFG S
Sbjct: 185 PDLFIRTGGEQRISNFMLWQLAYSELYFTERYWPDFDAAEMDRAFAWYRNRERRFGRTSA 244
Query: 242 K 242
+
Sbjct: 245 Q 245
>gi|256832762|ref|YP_003161489.1| undecaprenyl diphosphate synthase [Jonesia denitrificans DSM 20603]
gi|256686293|gb|ACV09186.1| undecaprenyl diphosphate synthase [Jonesia denitrificans DSM 20603]
Length = 260
Score = 261 bits (666), Expect = 8e-68, Method: Composition-based stats.
Identities = 94/238 (39%), Positives = 143/238 (60%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + P H+ I+MDGNGRWA RGLPR GH+ G ++VA A E+GI+++++
Sbjct: 14 LPPGIPAQFVPQHVAIVMDGNGRWANQRGLPRTEGHKAGEVALLDVVAGAIEMGIRHVSV 73
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW+R E+ L+ K L++ ++ + ++VR G R L ++ L+EA
Sbjct: 74 YAFSTENWKRSPDEVRFLMGFNKEVLRRRRDTMNEWGVRVRWSGRRPRLWPSVVKELEEA 133
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E TR NT L + NY R EI+ A + +D+ +G + V ++A+YLD D+P
Sbjct: 134 EALTRSNTVCTLNMCVNYGGRAEIADAAAALARDVAAGKLDPRKVSEKVLARYLDEPDLP 193
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
D DL +R+ GE+R S+F+LWQ AY+E VF+ WPDF R + A+ Y RDRR+GG
Sbjct: 194 DVDLFVRSSGEQRFSNFMLWQSAYAEMVFLNTLWPDFDRRTLWEAVGIYARRDRRYGG 251
>gi|320100343|ref|YP_004175935.1| Undecaprenyl pyrophosphate synthetase [Desulfurococcus mucosus DSM
2162]
gi|319752695|gb|ADV64453.1| Undecaprenyl pyrophosphate synthetase [Desulfurococcus mucosus DSM
2162]
Length = 280
Score = 261 bits (666), Expect = 8e-68, Method: Composition-based stats.
Identities = 91/241 (37%), Positives = 130/241 (53%), Gaps = 3/241 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P HIGII DGN RWA G GH G E E++ ++GI+ +TI
Sbjct: 40 LWMQIRGGPFPRHIGIIPDGNRRWARRLGFDPSLGHIYGYERMKEVLKWIWDLGIRYVTI 99
Query: 61 FAFSINNWR-RPVSEISELVKLIKSFLK--KGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+A S N + R E L L + L+ + + + ++V+V G + DI+ +
Sbjct: 100 YAMSTENCKYRSNGEREHLFNLARKGLRELRELRDIHERKVRVKVFGTLDLVPSDIVELA 159
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
KE E +T L IA Y R EI A+K + +D+ G + D+ +KYL TS
Sbjct: 160 KELEKETEKYDSYQLNIALCYGGRQEILDAVKAVVRDVIDGKITVDDISEEAFSKYLYTS 219
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+ PDPDLIIRT GE+R+S+FLLWQ AYSE F YWP+F + F+ A+ Y +R+RRFG
Sbjct: 220 EAPDPDLIIRTSGEERISNFLLWQSAYSELYFCDVYWPEFRKIDFWRAIRSYQMRERRFG 279
Query: 238 G 238
Sbjct: 280 R 280
>gi|207723358|ref|YP_002253757.1| undecaprenyl pyrophosphate synthetase (upp
synthetase)(di-trans,poly-cis-decaprenylcistransferase)
(undecaprenyl diphosphate synthase) (uds) protein
[Ralstonia solanacearum MolK2]
gi|206588557|emb|CAQ35520.1| undecaprenyl pyrophosphate synthetase (upp
synthetase)(di-trans,poly-cis-decaprenylcistransferase)
(undecaprenyl diphosphate synthase) (uds) protein
[Ralstonia solanacearum MolK2]
Length = 259
Score = 261 bits (666), Expect = 8e-68, Method: Composition-based stats.
Identities = 99/241 (41%), Positives = 146/241 (60%), Gaps = 2/241 (0%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+A ++ P H+ IIMDGNGRWA R LPR AGH +G++ +V AAA G++ LT+F
Sbjct: 7 LAVPDTADTPHHVAIIMDGNGRWATERHLPRMAGHSRGLDAVRAVVDAAANRGVRYLTLF 66
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP E+S L+KL + L++ L ++ ++RV+G+ + + I +++EAE
Sbjct: 67 AFSSENWRRPAEEVSFLMKLFMTALRREVSKLHESGFRLRVVGDLSAFNPRIQLLIREAE 126
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T N+GL + IA NY R +I +A++ + D + + I+ YL + +
Sbjct: 127 AKTAANSGLTVTIAANYGGRWDILQAMRALVAD--QPDIAPEAITEEAISPYLALAYASE 184
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL IRTGGE+R+S+F+LWQ+AYSE F YWPDF A Y R+RRFG S
Sbjct: 185 PDLFIRTGGEQRISNFMLWQLAYSELYFTERYWPDFDAAEMDRAFAWYRNRERRFGRTSA 244
Query: 242 K 242
+
Sbjct: 245 Q 245
>gi|304389666|ref|ZP_07371626.1| di-trans,poly-cis-decaprenylcistransferase [Mobiluncus curtisii
subsp. curtisii ATCC 35241]
gi|304327070|gb|EFL94308.1| di-trans,poly-cis-decaprenylcistransferase [Mobiluncus curtisii
subsp. curtisii ATCC 35241]
Length = 260
Score = 261 bits (666), Expect = 8e-68, Method: Composition-based stats.
Identities = 94/226 (41%), Positives = 131/226 (57%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA A+GL R AGH G + +A A E G+K L+++AFS NW+R
Sbjct: 29 HVAIIMDGNGRWANAQGLNRTAGHEAGEYALMDTIAGAVEAGVKFLSVYAFSTENWKRSP 88
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+E+ L+ + L+ L ++VR G L +L L+ AE TR NTG L
Sbjct: 89 AEVKFLMGYSRRVLRDRRDELNAWGVRVRWSGREGRLWKSVLTELRRAETLTRGNTGTQL 148
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+ NY R E++ A + + Q + +G++ + + A+ L DVPD DL+IRT GE+
Sbjct: 149 IMCLNYGGRAELADAARKLAQRVAAGTLNPERITEATFARELYLPDVPDVDLLIRTSGEQ 208
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R S+FL WQ AY+E VF PE WP++ R + L Y RDRRFGG
Sbjct: 209 RTSNFLPWQAAYAELVFAPEPWPEYGRAALWRDLLVYQHRDRRFGG 254
>gi|213965791|ref|ZP_03393983.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
amycolatum SK46]
gi|213951550|gb|EEB62940.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
amycolatum SK46]
Length = 239
Score = 261 bits (666), Expect = 9e-68, Method: Composition-based stats.
Identities = 93/238 (39%), Positives = 138/238 (57%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + P+HI ++MDGNGRWA RGL R GH++G V E V A E+G+K+L+
Sbjct: 1 MNPPVPQQFVPNHIALVMDGNGRWAQQRGLKRTEGHKRGEAVLMECVDACLEMGVKHLSA 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW R V E+ L+ + L++ L N++VR G R L ++ L+ A
Sbjct: 61 YAFSTENWHRSVDEVRFLMGFNRDVLRRRRDELDSKNVRVRWAGRRPRLWRSVIKELEIA 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E+QT+ N L L++ NY R EI A + I + +G + +D+ A++LD +P
Sbjct: 121 EEQTKDNDALTLYMCVNYGGRAEIVDAAREIARQAAAGELSEYDLTEKSFAQFLDEPTMP 180
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
D DL +R GE+R S+FL+WQ AY+E V+ + +PDF R+ A+ +Y RDRRFG
Sbjct: 181 DVDLFLRPSGEQRTSNFLIWQSAYAEMVYQDKLFPDFGRDDMRAAVVEYAKRDRRFGK 238
>gi|322967614|sp|B8XA40|ZFPS_SOLHA RecName: Full=(2Z,6Z)-farnesyl diphosphate synthase, chloroplastic;
AltName: Full=Z,Z-FPP synthase; AltName:
Full=Z,Z-farnesyl pyrophosphate synthase; Flags:
Precursor
gi|212727255|gb|ACJ38408.1| Z,Z-farnesyl pyrophosphate synthase [Solanum habrochaites]
Length = 303
Score = 261 bits (666), Expect = 9e-68, Method: Composition-based stats.
Identities = 83/236 (35%), Positives = 134/236 (56%), Gaps = 5/236 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P HI +IMDGN RWA +GL GH+ EI ++++GI+ +T FAFS
Sbjct: 72 LDEELMPKHIALIMDGNRRWAKDKGLDVSEGHKHLFPKLKEICDISSKLGIQVITAFAFS 131
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+R E+ L++ ++ + ++ ++V +IG + L + + E+ T
Sbjct: 132 TENWKRAKGEVDFLMQ----MFEELYDEFSRSGVRVSIIGCKTDLPMTLQKCIALTEETT 187
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ N GL+L IA NY +I +A K+I +G + D++ +L + L++ P+PDL
Sbjct: 188 KGNKGLHLVIALNYGGYYDILQATKSIVNKAMNGLLDVEDINKNLFDQELESK-CPNPDL 246
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
+IRTGG++R+S+FLLWQ+AY+EF F +PDF E A+ + R RRFGG +
Sbjct: 247 LIRTGGDQRVSNFLLWQLAYTEFYFTKTLFPDFGEEDLKEAIINFQQRHRRFGGHT 302
>gi|119719672|ref|YP_920167.1| undecaprenyl diphosphate synthase [Thermofilum pendens Hrk 5]
gi|119524792|gb|ABL78164.1| Undecaprenyl pyrophosphate synthetase [Thermofilum pendens Hrk 5]
Length = 268
Score = 261 bits (666), Expect = 9e-68, Method: Composition-based stats.
Identities = 90/243 (37%), Positives = 133/243 (54%), Gaps = 5/243 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P H+ I+DGN RWA RG P GHR G E +E++ ++G+ +T+
Sbjct: 26 LDREVRGGEIPRHVAFILDGNRRWARRRGFPPWMGHRFGAEKVDEVLDWCYDLGVVTVTL 85
Query: 61 FAFSINNW-RRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVL 117
+ S N RR E+ + +++ + + L + ++V+ IG+ L DI +
Sbjct: 86 YVLSTENLERRSKEELENIFGILREKIDELASSEELHRRQVRVKFIGDIKRLPVDIQEKM 145
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+E E++TR L IA Y R EI A++ I ++ SG + ++D L AKYL T
Sbjct: 146 RELEERTRSYNKRYLNIAVAYGGRHEILEAVRQIAVEVRSGRLSPEEIDEKLFAKYLYTG 205
Query: 178 D--VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
D P+PDL+IRT GE R+S+FLLWQ+AYSE VF+ YWPDF R F A+ Y R RR
Sbjct: 206 DEPHPEPDLVIRTSGEVRISNFLLWQIAYSELVFLDVYWPDFRRIDFLRAIRTYQSRQRR 265
Query: 236 FGG 238
G
Sbjct: 266 KGA 268
>gi|116513084|ref|YP_811991.1| undecaprenyl pyrophosphate synthetase [Lactococcus lactis subsp.
cremoris SK11]
gi|116108738|gb|ABJ73878.1| Undecaprenyl pyrophosphate synthetase [Lactococcus lactis subsp.
cremoris SK11]
Length = 244
Score = 261 bits (666), Expect = 9e-68, Method: Composition-based stats.
Identities = 94/235 (40%), Positives = 132/235 (56%), Gaps = 8/235 (3%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P+HIGIIMDGNGRWA +G PR GH+ G++ ++ A GIK +T++AFS NW
Sbjct: 14 LPEHIGIIMDGNGRWAKKKGKPRIFGHKAGMDSLKDVAVHGARRGIKVMTVYAFSTENWT 73
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RPV E+ ++ L F K LK+ NI++R+IG R + L + A +T NTG
Sbjct: 74 RPVDEVKFIMSLPIDFYSKYVPVLKEENIQIRMIGERAGMPKATLDSIDRAARETSENTG 133
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS----DVPDPDLI 185
+ L A NY R +I AI+ + + ++K+L T+ ++ DPDLI
Sbjct: 134 MILNFAMNYGGRRDIILAIQELA----KSGQDLSTLTEEDLSKHLQTAVLQENLRDPDLI 189
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IRT GE+R+S+FL WQ AYSE F WPDF A+ + RDRR+GG+
Sbjct: 190 IRTSGEQRMSNFLTWQSAYSELYFAQTAWPDFDEAELDKAIAAFQKRDRRYGGVK 244
>gi|68535682|ref|YP_250387.1| hypothetical protein jk0610 [Corynebacterium jeikeium K411]
gi|68263281|emb|CAI36769.1| uppS2 [Corynebacterium jeikeium K411]
Length = 249
Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats.
Identities = 86/238 (36%), Positives = 135/238 (56%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ + P HI ++MDGNGRWA RG+ R GHR+G V +V E+G+ L+ +A
Sbjct: 12 SEIPPELRPKHIALVMDGNGRWAKERGMVRTEGHRRGEAVLMSLVEECIELGVDYLSAYA 71
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRR E+ L+ + L++ L +++R +G R L ++ L++AE+
Sbjct: 72 FSTENWRRSADEVRFLMGFNRDVLRRQRDYLNSLGVRIRWVGRRPRLWRSVIAELEQAEE 131
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T+ NT + L + NY R EI+ A + I +D+++G + V+ A+YLD D+PD
Sbjct: 132 LTKNNTTMTLGMCVNYGGRAEIADAARWIAEDVKAGRLKPRQVNEKTFARYLDEPDMPDV 191
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL +R GE R S+FL WQ Y+E V+ +PD++ A+ ++ RDRRFGG+
Sbjct: 192 DLFLRPSGEMRTSNFLPWQSTYAEMVYQDVLFPDYTPNHLRAAVLEFAKRDRRFGGVK 249
>gi|296394228|ref|YP_003659112.1| undecaprenyl diphosphate synthase [Segniliparus rotundus DSM 44985]
gi|296181375|gb|ADG98281.1| undecaprenyl diphosphate synthase [Segniliparus rotundus DSM 44985]
Length = 257
Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats.
Identities = 83/238 (34%), Positives = 132/238 (55%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P H+ +IMDGNGRWA RGLPR GH++G V ++V E+G+ L+
Sbjct: 19 LAPRLAPDEAPKHVALIMDGNGRWAQQRGLPRTEGHKRGEAVLMDLVHGCLELGVPWLSA 78
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW R SE++ L+ + +++ + + ++VR G R L ++ L+ A
Sbjct: 79 YAFSTENWSRSPSEVAFLMGFNRDVIRRRRDEMHELGVRVRWAGRRPRLWRSVIAELEAA 138
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ T+ NT +NL + NY R E++ A I ++G + + + +L D+P
Sbjct: 139 MELTKDNTKMNLVMCVNYGGRAELADAAAQIAALAKAGKANPDKITEAALRAFLYVPDMP 198
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
D DL++R GE R+S+FLLWQ AY+E VF + +PD R + A +Y R+RRFG
Sbjct: 199 DVDLMLRPSGEMRVSNFLLWQGAYAELVFQDKLFPDIDRRDLWAACEEYASRNRRFGK 256
>gi|58697247|ref|ZP_00372636.1| undecaprenyl diphosphate synthase [Wolbachia endosymbiont of
Drosophila simulans]
gi|58698900|ref|ZP_00373765.1| undecaprenyl diphosphate synthase [Wolbachia endosymbiont of
Drosophila ananassae]
gi|225630153|ref|YP_002726944.1| undecaprenyl diphosphate synthase [Wolbachia sp. wRi]
gi|58534581|gb|EAL58715.1| undecaprenyl diphosphate synthase [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58536415|gb|EAL59847.1| undecaprenyl diphosphate synthase [Wolbachia endosymbiont of
Drosophila simulans]
gi|225592134|gb|ACN95153.1| undecaprenyl diphosphate synthase [Wolbachia sp. wRi]
Length = 231
Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats.
Identities = 97/236 (41%), Positives = 134/236 (56%), Gaps = 8/236 (3%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ S P H+ IIMDGNGRWA +G + G++KG EV +I ++ I LT++AFS
Sbjct: 2 LNQESLPKHLAIIMDGNGRWANNQGRVKIDGYKKGSEVAYDIAKYCTDLTIPYLTLYAFS 61
Query: 65 INNWRRPVSEISELVKLIKSFLKKG--FYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
+ NW RP +E L L S L + NIK+ IGN L IL +K+AE+
Sbjct: 62 MENWLRPKNETDCLFDLFYSVLTNEDKVNFICNCNIKLNFIGNLSLLPSKILDQIKKAEE 121
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T N GL L +A +Y ++ EI++AI NI ++ + V K+L T D+P
Sbjct: 122 MTHKNDGLLLTVAVSYGAKQEITQAISNIIKENIAY------VSEEEFEKFLYTKDLPKL 175
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DL+IRTGGEKRLS+FLLWQ AY+E F WPDFS + AL Y R++++G
Sbjct: 176 DLLIRTGGEKRLSNFLLWQAAYAELYFCDTLWPDFSCQDLSKALEDYTKREKKYGR 231
>gi|299139478|ref|ZP_07032652.1| undecaprenyl diphosphate synthase [Acidobacterium sp. MP5ACTX8]
gi|298598406|gb|EFI54570.1| undecaprenyl diphosphate synthase [Acidobacterium sp. MP5ACTX8]
Length = 304
Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats.
Identities = 97/257 (37%), Positives = 140/257 (54%), Gaps = 19/257 (7%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ S P H+ IIMDGNGRWA R L R GH++G E +V A+ + + LT++AF
Sbjct: 29 TLEPSRIPQHVAIIMDGNGRWAGKRALKRFLGHQQGAESVQHVVETASRIDLPWLTLYAF 88
Query: 64 SINN-WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
S+ N RRP SE+S L+KL+KS+L + NN+++ IG L D+ ++ A +
Sbjct: 89 SLENNLRRPKSEVSFLMKLLKSYLVSNVKRMNDNNVRMAYIGRTCELPGDVQDTMQWAAE 148
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRA----IKNIFQDIESGSVCSHD-------------- 164
QT NTG L +A NY +R EI + + + + V D
Sbjct: 149 QTAKNTGTTLTLALNYGARSEIVDSARNIVHAMIAEAAKRGVSLEDMLAAEGVDDAIKAR 208
Query: 165 VDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFH 224
+D ++ L T +PDPDL+IRT GE+R+S+FLLWQ+AY+E WPDF
Sbjct: 209 IDEPQLSANLYTGHMPDPDLLIRTSGEQRISNFLLWQIAYAEIFVTERLWPDFRGLHLLE 268
Query: 225 ALNQYNLRDRRFGGLSK 241
A+ Y R+RRFGGL +
Sbjct: 269 AIADYQQRERRFGGLGE 285
>gi|18424144|ref|NP_568882.1| dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase,
putative [Arabidopsis thaliana]
gi|75247639|sp|Q8RX73|DDPS3_ARATH RecName: Full=Dehydrodolichyl diphosphate synthase 3;
Short=Dedol-PP synthase 3
gi|19699277|gb|AAL91250.1| AT5g58780/mzn1_230 [Arabidopsis thaliana]
gi|28416467|gb|AAO42764.1| At5g58780/mzn1_230 [Arabidopsis thaliana]
gi|332009714|gb|AED97097.1| dehydrodolichyl diphosphate synthase 3 [Arabidopsis thaliana]
Length = 302
Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats.
Identities = 93/238 (39%), Positives = 134/238 (56%), Gaps = 2/238 (0%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
V + P H+ +IMDGN RWA GL GH G + E ++GI ++ F
Sbjct: 62 VEELQRELMPRHVAVIMDGNRRWAKRAGLLTSQGHEAGAKRLIEFSELCFKLGIHTVSAF 121
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW R E+ L+ LI+ +LK ++ +V VIGN + + +L ++E E
Sbjct: 122 AFSTENWGRHKIEVKCLMSLIQHYLKSKIQYFQREETRVSVIGNLTKIPESLLRTVQEIE 181
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS--DV 179
+ TR +L +A +YS R +I RA K+I + E G + DVD +LI + L T+ +
Sbjct: 182 EATRSYKKKHLILAIDYSGRLDILRACKSIVKKSEKGLIREEDVDEALIERELLTNCTEF 241
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
P PDL+IRT GE+R+S+F LWQ+AY+E F P WPDF ++ AL Y R+RRFG
Sbjct: 242 PSPDLLIRTSGEQRISNFFLWQLAYTELFFSPVLWPDFDKDKLLEALVSYQRRERRFG 299
>gi|300858944|ref|YP_003783927.1| hypothetical protein cpfrc_01527 [Corynebacterium
pseudotuberculosis FRC41]
gi|300686398|gb|ADK29320.1| hypothetical protein cpfrc_01527 [Corynebacterium
pseudotuberculosis FRC41]
gi|302206645|gb|ADL10987.1| Undecaprenyl pyrophosphate synthase [Corynebacterium
pseudotuberculosis C231]
gi|302331194|gb|ADL21388.1| Undecaprenyl pyrophosphate synthase [Corynebacterium
pseudotuberculosis 1002]
gi|308276888|gb|ADO26787.1| Undecaprenyl pyrophosphate synthase [Corynebacterium
pseudotuberculosis I19]
Length = 245
Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats.
Identities = 87/237 (36%), Positives = 135/237 (56%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ + P HI ++MDGNGRWA RGL R GH++G V ++V A + I L+ +AF
Sbjct: 9 NIPAEFLPRHIALVMDGNGRWATQRGLKRTEGHKRGEAVLLDMVEACLAMKIPYLSAYAF 68
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRR E+ L+ + L++ L + ++VR G R L ++ L+ AE+
Sbjct: 69 STENWRRSTDEVRFLMGFNRDVLQRQKERLHELGVRVRWAGRRPRLWRSVIKELESAEEL 128
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NT + L + NY R EI A + I + G + D+ + +++LD D+PD D
Sbjct: 129 TKNNTNMTLVMCVNYGGRAEIVDAAREIARLAAQGELRPQDITEASFSQFLDEPDMPDVD 188
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
L +R GEKR S+FLLWQ AY+E ++ + +PD++ + A+ +Y RDRRFGG
Sbjct: 189 LFLRPSGEKRTSNFLLWQSAYAEMIYQNKLFPDYTARDLYCAVEEYARRDRRFGGTK 245
>gi|15674112|ref|NP_268287.1| undecaprenyl pyrophosphate synthetase [Lactococcus lactis subsp.
lactis Il1403]
gi|42559874|sp|Q9CDT1|UPPS_LACLA RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|12725187|gb|AAK06228.1|AE006441_6 undecaprenyl pyrophosphate synthetase [Lactococcus lactis subsp.
lactis Il1403]
Length = 244
Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats.
Identities = 94/235 (40%), Positives = 133/235 (56%), Gaps = 8/235 (3%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P+HIGIIMDGNGRWA +G PR GH+ G++ ++ A GIK +T++AFS NW
Sbjct: 14 LPEHIGIIMDGNGRWAKQKGKPRIFGHKAGMDSLKDVAVHGARRGIKVMTVYAFSTENWT 73
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RPV E+ ++ L F K LK+ NI++R+IG R L L + A +T N G
Sbjct: 74 RPVDEVKFIMSLPIDFYSKYVPVLKEENIQIRMIGEREGLPKATLDSIDRAAQETSENDG 133
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS----DVPDPDLI 185
+ L A NY R +I AI+ + + ++K+L T+ ++ DPDLI
Sbjct: 134 MILNFAMNYGGRRDIILAIQELA----KSGQDLSLLTEEELSKHLQTAVLSENLRDPDLI 189
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IRT GE+R+S+FL WQ AYSE F WPDF + A++ + RDRR+GG+
Sbjct: 190 IRTSGEQRMSNFLTWQSAYSELYFAQTAWPDFDDKELDKAISAFQKRDRRYGGVK 244
>gi|300087326|ref|YP_003757848.1| undecaprenyl diphosphate synthase [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299527059|gb|ADJ25527.1| undecaprenyl diphosphate synthase [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 236
Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats.
Identities = 95/239 (39%), Positives = 132/239 (55%), Gaps = 4/239 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + +PP H+ IIMDGNGRWA +G R GHR G+ E++ A + G+ +T+
Sbjct: 1 MHQELEPVAPPCHVAIIMDGNGRWALRQGWERLEGHRAGLNNIPEVIRAFTDAGVGYITL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
F+FS NW+RP E+ L+ L+ L K L NNI +R +G L + ++
Sbjct: 61 FSFSTENWKRPAGEVRGLLSLLAEALGKMSQELDDNNIVLRHLGRLDRLPYQLRHKVRRV 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+QT NTG + AF+Y SR E+ A + + V + +D + L +S +P
Sbjct: 121 MEQTAGNTGAVVSFAFDYGSRAELVEAARQALKQ----KVAADTLDEKTFSGLLSSSGLP 176
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
D DL+IRTGGE+RLS+FLLWQ AY+E F WPDF + AL Y R RRFGGL
Sbjct: 177 DVDLLIRTGGERRLSNFLLWQSAYAELYFSDTLWPDFKEDEINRALADYAGRHRRFGGL 235
>gi|182413740|ref|YP_001818806.1| undecaprenyl diphosphate synthase [Opitutus terrae PB90-1]
gi|177840954|gb|ACB75206.1| undecaprenyl diphosphate synthase [Opitutus terrae PB90-1]
Length = 234
Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats.
Identities = 92/225 (40%), Positives = 138/225 (61%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA RGLPR GHR+G+E + AA ++G++ LT++AFS+ NW+RP E+
Sbjct: 1 MDGNGRWAKQRGLPRIEGHRRGVETVRTVTFAARDLGVRMLTLYAFSVENWKRPQDEVGA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ L++ +LKK + ++ +++R IG L + +L+ A ++TR T L +A N
Sbjct: 61 LMGLLEFYLKKELETFVRDRVRLRTIGRTQDLPAGVQKLLRTAIEETRHFTDYTLVLALN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y +R E A + + +G+ +D ++YL T+ +PDPDLIIRT GE R+S+F
Sbjct: 121 YGARTEAVDAARAYAAAVAAGTEKLNDDSWETFSRYLYTTGLPDPDLIIRTSGETRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
LL Q AY+EFVF P WPDF + A+ +Y R+RRFG +
Sbjct: 181 LLLQAAYAEFVFTPVLWPDFGKPELAAAIAEYARRERRFGQTGDQ 225
>gi|42520390|ref|NP_966305.1| undecaprenyl diphosphate synthase [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|99034959|ref|ZP_01314763.1| hypothetical protein Wendoof_01000405 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
gi|225629852|ref|ZP_03787763.1| undecaprenyl diphosphate synthase [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|42410128|gb|AAS14239.1| undecaprenyl diphosphate synthase [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|225591296|gb|EEH12425.1| undecaprenyl diphosphate synthase [Wolbachia endosymbiont of
Muscidifurax uniraptor]
Length = 231
Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats.
Identities = 97/236 (41%), Positives = 134/236 (56%), Gaps = 8/236 (3%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ S P H+ IIMDGNGRWA +G + G++KG EV +I ++ I LT++AFS
Sbjct: 2 LNQESLPKHLAIIMDGNGRWANNQGRVKIDGYKKGSEVAYDIAKYCTDLTIPYLTLYAFS 61
Query: 65 INNWRRPVSEISELVKLIKSFLKKG--FYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
+ NW RP +E L L S L + NIK+ IGN L IL +K+AE+
Sbjct: 62 MENWLRPKNETDCLFDLFYSVLTNEDKVNFIYNCNIKLNFIGNLSLLPSKILDQIKKAEE 121
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T N GL L +A +Y ++ EI++AI NI ++ + V K+L T D+P
Sbjct: 122 MTHKNDGLLLTVAVSYGAKQEITQAISNIIKENIAY------VSEEEFEKFLYTKDLPKL 175
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DL+IRTGGEKRLS+FLLWQ AY+E F WPDFS + AL Y R++++G
Sbjct: 176 DLLIRTGGEKRLSNFLLWQAAYAELYFCDTLWPDFSCQDLSKALEDYTKREKKYGR 231
>gi|295689594|ref|YP_003593287.1| undecaprenyl diphosphate synthase [Caulobacter segnis ATCC 21756]
gi|295431497|gb|ADG10669.1| undecaprenyl diphosphate synthase [Caulobacter segnis ATCC 21756]
Length = 259
Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats.
Identities = 96/229 (41%), Positives = 135/229 (58%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA RG+PR GHR G+ V A + LT+F FS NWRRP
Sbjct: 24 HVAIIMDGNGRWAKQRGMPRVLGHRAGVNALKRTVEGAQSQNVGVLTVFGFSTENWRRPA 83
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+SEL+ L+K++++ L + +KVR+IG R L DI V++ AE +T NT L
Sbjct: 84 QEVSELMGLLKAYVESDLERLARAGVKVRIIGRRAGLSPDIAEVIERAEKRTAQNTEFVL 143
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+AFNY + +I+ A + + + G D+ + L T+ P PDLI+RT GE+
Sbjct: 144 QVAFNYGGQADIADAARAFAEKVVRGEARPEDLTEESFGQLLSTAAAPPPDLIVRTSGER 203
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
R+S+FLLW AY+E VF WPD+ E A+ +Y RDRR+GG++
Sbjct: 204 RISNFLLWDSAYAELVFQDVLWPDYGPEALAAAIAEYRRRDRRYGGVAA 252
>gi|289425570|ref|ZP_06427347.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
SK187]
gi|289427255|ref|ZP_06428971.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
J165]
gi|295130502|ref|YP_003581165.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
SK137]
gi|289154548|gb|EFD03236.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
SK187]
gi|289159724|gb|EFD07912.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
J165]
gi|291375317|gb|ADD99171.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
SK137]
gi|332675338|gb|AEE72154.1| undecaprenyl pyrophosphate synthase [Propionibacterium acnes 266]
Length = 268
Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats.
Identities = 86/227 (37%), Positives = 124/227 (54%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ I+MDGNGRWA RGL R GH +G + +++ A E+GI L+ +AFS NW+R
Sbjct: 32 QHVAIVMDGNGRWARQRGLRRTEGHARGEDALFDVIEGAIEMGIPYLSAYAFSTENWKRS 91
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E+ L+ + + + L +++R G R L ++ L+ AE Q+ NT L
Sbjct: 92 PDEVRWLMGFNRDVIHRRRDQLDAMGVRIRWAGRRPKLWKSVIKELESAEKQSTDNTVLT 151
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L NY R EI A+++I + G + + +LD +VPD DL R+ GE
Sbjct: 152 LQFCVNYGGRAEIVDAVRDIARLAAEGKIDPDHITEKTFRTHLDEPEVPDVDLFWRSSGE 211
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+R S+FLLWQ AY+E VF WPD R + A+ +Y RDRRFGG
Sbjct: 212 QRTSNFLLWQSAYAEMVFSDVLWPDVDRRDLWAAVVEYAKRDRRFGG 258
>gi|329889360|ref|ZP_08267703.1| di-trans,poly-cis-decaprenylcistransferase [Brevundimonas diminuta
ATCC 11568]
gi|328844661|gb|EGF94225.1| di-trans,poly-cis-decaprenylcistransferase [Brevundimonas diminuta
ATCC 11568]
Length = 252
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 94/232 (40%), Positives = 137/232 (59%), Gaps = 2/232 (0%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ P H+ +IMDGNGRWA RGLPR GHR+G++ + AA E+G++ LT+F FS
Sbjct: 10 PAKGPRHVALIMDGNGRWAQRRGLPRAVGHREGVQALRRTIKAAPELGVRCLTVFGFSTE 69
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP E+S+L+ L+++F+ L ++V+V+G R L DDI ++ AE +T
Sbjct: 70 NWSRPADEVSDLMGLVRAFVGSDLKRLAAAGVRVKVLGRRKGLPDDIAAIVARAEAETAD 129
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N L +AFNY R ++ A + + +G VD + L T+ P DLI+
Sbjct: 130 NDKFLLQVAFNYGGRADLVDAAQRLADRARAGEDVV--VDEEALGAGLSTAGAPPVDLIV 187
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
RT GE+RLS+FLLW+ AY+E VF WPD+ E A+ Q+ R+RR+GG
Sbjct: 188 RTSGEQRLSNFLLWEAAYAEMVFQEILWPDYGAEALAEAIAQFGCRERRYGG 239
>gi|315084413|gb|EFT56389.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL027PA2]
Length = 268
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 86/227 (37%), Positives = 124/227 (54%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ I+MDGNGRWA RGL R GH +G + +++ A E+GI L+ +AFS NW+R
Sbjct: 32 QHVAIVMDGNGRWARQRGLRRTEGHARGEDALFDVIEGAIEMGIPYLSAYAFSTENWKRS 91
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E+ L+ + + + L +++R G R L ++ L+ AE Q+ NT L
Sbjct: 92 PDEVRWLMGFNRDVIHRRRDQLDAMGVRIRWAGRRPKLWKSVIKELESAEKQSTDNTVLT 151
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L NY R EI A+++I + G + + +LD +VPD DL R+ GE
Sbjct: 152 LQFCVNYGGRAEIVDAVRDIARLAAEGKIDPDHITEKTFRTHLDEPEVPDVDLFWRSSGE 211
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+R S+FLLWQ AY+E VF WPD R + A+ +Y RDRRFGG
Sbjct: 212 QRTSNFLLWQSAYAEMVFSDVLWPDVDRRDLWAAVVEYAKRDRRFGG 258
>gi|114768799|ref|ZP_01446425.1| undecaprenyl diphosphate synthase [alpha proteobacterium HTCC2255]
gi|114549716|gb|EAU52597.1| undecaprenyl diphosphate synthase [alpha proteobacterium HTCC2255]
Length = 241
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 103/227 (45%), Positives = 144/227 (63%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ ++MDGNGRWA R L R GH KG + IV A+ ++ + +LT+FAFS NW+R
Sbjct: 13 HVAMVMDGNGRWANERALARLKGHAKGADRVRHIVRASLDMKVTHLTLFAFSTENWKRSE 72
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
SE+ L+ L K F+K L N +KVR IGNR LD I+ ++ E E T+ N LNL
Sbjct: 73 SEVIGLMGLFKKFMKSEAKKLLINGVKVRFIGNRSRLDKSIIKLMDELEFLTKENDNLNL 132
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA NY RDEI RA K I + ++ G + D++ + + LDT ++PDPDL+IRT GE
Sbjct: 133 TIALNYGGRDEIVRATKKISEKVKLGLIDIDDINIEMFSNNLDTFELPDPDLVIRTSGEL 192
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
R S+FL WQ AYSE+VF WPDF+++++ L ++ R+RRFG +
Sbjct: 193 RTSNFLPWQCAYSEYVFEKSNWPDFNKDIYEEILIEFKTRERRFGAI 239
>gi|325929596|ref|ZP_08190710.1| Undecaprenyl pyrophosphate synthetase [Xanthomonas perforans
91-118]
gi|325540106|gb|EGD11734.1| Undecaprenyl pyrophosphate synthetase [Xanthomonas perforans
91-118]
Length = 244
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 92/233 (39%), Positives = 133/233 (57%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI IIMDGNGRWA R PR GHR G N + E G+ LT+FAFS NW
Sbjct: 1 MPRHIAIIMDGNGRWAQRRRRPRMIGHRAGARAVNRTIDFCLEKGVSALTLFAFSSENWG 60
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ L+KL L + L++ ++VR IG+R + + AE T N+
Sbjct: 61 RPQDEVDALMKLFLHALDREVEELQRRGVQVRFIGDRSRFAAPLRERMAGAERSTATNSR 120
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L IA +Y R +I+ A + + +D+ +G + +D +L++ + +D+P PDL IRTG
Sbjct: 121 LVLSIAASYGGRQDIAAAARALAEDVAAGRLQPEQIDEALLSSRVALADLPAPDLFIRTG 180
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
G+ R+S+FLLWQ+AY+E F WP+F + AL+ + R+RRFG S +
Sbjct: 181 GDTRISNFLLWQLAYTELWFTETLWPEFDAGVLQQALDDFAGRERRFGLTSAQ 233
>gi|307293417|ref|ZP_07573263.1| undecaprenyl diphosphate synthase [Sphingobium chlorophenolicum
L-1]
gi|306881483|gb|EFN12699.1| undecaprenyl diphosphate synthase [Sphingobium chlorophenolicum
L-1]
Length = 246
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 95/228 (41%), Positives = 148/228 (64%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA R LPR AGHR G+E + AA E+G++ LT++AFS NW+RP
Sbjct: 19 RHVAIIMDGNGRWAKKRFLPRIAGHRAGVEAVRRVARAARELGLECLTLYAFSSENWKRP 78
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE+++L+ L++ F++ N +++R+IGN +LD ++ +++ A +T N+G
Sbjct: 79 ASEVADLMGLLRHFIQADLDEFHANGVRLRIIGNYQALDPSLVDLIESAVARTAGNSGPI 138
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+ IA NY ++DE+ R + + + + +G + + ++ + L T+D+P DL+IRT GE
Sbjct: 139 IAIALNYGAQDELVRMAQILARRVAAGEIAAEEIGIEHVDAALYTADLPPLDLMIRTSGE 198
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+RLS+F+LWQ AY+E F WPDF + AL+ + LRDRRFGGL
Sbjct: 199 QRLSNFMLWQAAYAELYFTDMLWPDFDGQALAAALDAFRLRDRRFGGL 246
>gi|108800415|ref|YP_640612.1| undecaprenyl pyrophosphate synthase [Mycobacterium sp. MCS]
gi|119869544|ref|YP_939496.1| undecaprenyl pyrophosphate synthetase [Mycobacterium sp. KMS]
gi|108770834|gb|ABG09556.1| Undecaprenyl pyrophosphate synthetase [Mycobacterium sp. MCS]
gi|119695633|gb|ABL92706.1| Undecaprenyl pyrophosphate synthetase [Mycobacterium sp. KMS]
Length = 298
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 86/235 (36%), Positives = 132/235 (56%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P H+ ++MDGNGRWA RGL R GH+ G V +I A E+GIK+LT++AF
Sbjct: 63 KIPADQVPQHVAVVMDGNGRWATQRGLGRTEGHKMGEAVLIDITCGAIEIGIKHLTVYAF 122
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + +++ +L +++R +G+R + + AE+
Sbjct: 123 STENWKRSTEEVRFLMGFNREVVRRRRENLNDMGVRMRWVGSRPRMWRSVSKEFDIAEEM 182
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T N + + NY R EI A + + Q+ G V + + A++L D+PD D
Sbjct: 183 TVDNDVITINYCVNYGGRTEIVEAARQLAQEAVDGKVNPSRITEAAFARHLHRPDIPDVD 242
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L IRT GE+R S+FLLWQ AY+E+VF + WPD+ R + A +Y R+RRFG
Sbjct: 243 LFIRTSGEQRASNFLLWQSAYAEYVFQDKLWPDYDRRDLWAACEEYVSRNRRFGR 297
>gi|154509425|ref|ZP_02045067.1| hypothetical protein ACTODO_01956 [Actinomyces odontolyticus ATCC
17982]
gi|153799059|gb|EDN81479.1| hypothetical protein ACTODO_01956 [Actinomyces odontolyticus ATCC
17982]
Length = 274
Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats.
Identities = 87/233 (37%), Positives = 135/233 (57%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
P H+ +IMDGNGRWA +RGL R GHR G + +A A + G++ L+++ FS
Sbjct: 34 RKGEVPAHVALIMDGNGRWANSRGLARTEGHRAGEYALMDTIAGAIDAGVRYLSVYTFST 93
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+R +E+S ++ L + L + + VR G R L ++ L++A+ T
Sbjct: 94 ENWKRSPAEVSFIMNYASDVLARRTDQLAQWGVHVRWSGRRPKLWKSVINALEKADRATS 153
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
L+L + NY R E++ A ++I + + +G + V ++++L DVPD DL+
Sbjct: 154 HCKALDLIMCVNYGGRAELADAARSIAEGVAAGRLSPRGVTEKTLSRHLYLPDVPDVDLM 213
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
IRT GE+RLS++LLWQ+AY+E +F+ WP F RE + L +Y RDRRFGG
Sbjct: 214 IRTSGEQRLSNYLLWQMAYAEMMFVNTPWPAFDREELWGCLEEYAGRDRRFGG 266
>gi|227488412|ref|ZP_03918728.1| undecaprenyl pyrophosphate synthase [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227091626|gb|EEI26938.1| undecaprenyl pyrophosphate synthase [Corynebacterium
glucuronolyticum ATCC 51867]
Length = 240
Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats.
Identities = 91/240 (37%), Positives = 137/240 (57%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + P+HI ++MDGNGRWA RG+ R GH++G V +I+ A E+GI +L+
Sbjct: 1 MKPDIPRKFLPNHIALVMDGNGRWAQERGMVRTEGHKRGEAVLMDIIDACLELGIPHLSA 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NWRR E+ L+ + L + L + ++VR G R L ++ L+ A
Sbjct: 61 YAFSTENWRRTADEVRFLMGFNRDVLHRQRDVLNEKGVRVRWAGRRPRLWRSVIRELELA 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E+ T+ NT + ++ NY R EI A + I + ++G++ V A++LD +P
Sbjct: 121 EEMTKENTRMTFYMCVNYGGRAEIVDAAREIARRAQAGTLRPEQVTEKTFAQFLDEPGMP 180
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
D DL +R GEKR S+FLLWQ AY+E V+ +PDF++E + A +Y RDRRFGG
Sbjct: 181 DVDLFLRPSGEKRTSNFLLWQSAYAEMVYQNTLFPDFTKENLYDACLEYAKRDRRFGGTK 240
>gi|297796813|ref|XP_002866291.1| hypothetical protein ARALYDRAFT_496003 [Arabidopsis lyrata subsp.
lyrata]
gi|297312126|gb|EFH42550.1| hypothetical protein ARALYDRAFT_496003 [Arabidopsis lyrata subsp.
lyrata]
Length = 289
Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats.
Identities = 89/235 (37%), Positives = 132/235 (56%), Gaps = 2/235 (0%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P H+ +IMDGN RWA GL G+ G + E ++GI ++ FAFS
Sbjct: 52 LRRELMPRHVAVIMDGNRRWAKQAGLLTSQGYEAGAKRLIEFAELCFKLGINTVSAFAFS 111
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW R E+ L+ L + +LK + I+V VIGN + + +L ++ E ED T
Sbjct: 112 TENWGRHKIEVKCLMYLFQRYLKSKIQFFQSKEIRVSVIGNLAKIPESLLGIITEIEDAT 171
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS--DVPDP 182
+ +L +A +YS R +I RA K+I + E G + +VD +L+ + L T + P P
Sbjct: 172 KSYKKKHLILAIDYSGRFDILRACKSIVKKSEQGLIREEEVDETLLERELQTKCTEFPSP 231
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRT GE+R+S+F LWQ+AY+E F P WPDF ++ AL+ Y R+RRFG
Sbjct: 232 DLLIRTSGEQRISNFFLWQLAYTELFFSPVLWPDFDKDKLLDALDSYQRRERRFG 286
>gi|239929185|ref|ZP_04686138.1| undecaprenyl diphosphate synthase [Streptomyces ghanaensis ATCC
14672]
gi|291437519|ref|ZP_06576909.1| undecaprenyl pyrophosphate synthetase 1 [Streptomyces ghanaensis
ATCC 14672]
gi|291340414|gb|EFE67370.1| undecaprenyl pyrophosphate synthetase 1 [Streptomyces ghanaensis
ATCC 14672]
Length = 257
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 83/238 (34%), Positives = 126/238 (52%), Gaps = 7/238 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ ++ P HIG+IMDGN RWA A G GHR G + E + E ++ +T++ S
Sbjct: 23 LDTAQVPKHIGVIMDGNRRWAKAAGSSTVHGHRAGADKIGEFLGWCTETDVEVVTLWLLS 82
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
+N+ RP E+ L+ +I+ ++ +V +G L + LKEAE+ T
Sbjct: 83 TDNFDRPKEELVPLLGIIEDVVRTL---AADGRWRVHHVGTLDLLPSGMQTTLKEAEEST 139
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSDVP 180
G+ + +A Y R EI+ A++++ D + VD +I ++L T P
Sbjct: 140 AHVDGIVVNVAIGYGGRQEIADAVRSMLLDAHEKGTSMEELAEAVDVDMIGRHLYTRAQP 199
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DPDL+IRT GE+RLS F+LWQ A+SE+ F +WP F + F AL Y R RR+GG
Sbjct: 200 DPDLVIRTSGEQRLSGFMLWQTAHSEYYFCEVFWPAFRKVDFLRALRDYAARHRRYGG 257
>gi|119026172|ref|YP_910017.1| undecaprenyl pyrophosphate synthase [Bifidobacterium adolescentis
ATCC 15703]
gi|154488979|ref|ZP_02029828.1| hypothetical protein BIFADO_02288 [Bifidobacterium adolescentis
L2-32]
gi|118765756|dbj|BAF39935.1| undecaprenyl pyrophosphate synthetase [Bifidobacterium adolescentis
ATCC 15703]
gi|154083116|gb|EDN82161.1| hypothetical protein BIFADO_02288 [Bifidobacterium adolescentis
L2-32]
Length = 263
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 84/241 (34%), Positives = 141/241 (58%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + P H+G+IMDGNGRWA RGL R GH+ V + +A A E G++ L++
Sbjct: 23 IIPDFPKNKVPRHVGVIMDGNGRWAQQRGLIRTDGHQAAEPVVFDTIAGAIEAGVRYLSL 82
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW+R E+ L+ + + + + + ++VR G R L ++ L+ A
Sbjct: 83 YTFSTENWKRSPQEVRFLMGFSRDIIHRRVDQMNEWGVRVRWSGRRPKLWKSVIDELEVA 142
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+++T+ N +++ NY R EI+ A I +++ G + V +IA++L D+P
Sbjct: 143 QEKTKNNKTIDVVFCLNYGGRAEIADACAAIAREVRDGKISGDRVTEKMIAEHLYNPDIP 202
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
D DL+IRT GE+R S+FL W+ AY+E F+PE +PD R++ + +++ Y RDRRFGG+
Sbjct: 203 DCDLVIRTSGEQRTSNFLPWEAAYAELDFVPELFPDCGRDVLWRSIDHYIHRDRRFGGVK 262
Query: 241 K 241
+
Sbjct: 263 R 263
>gi|294631153|ref|ZP_06709713.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. e14]
gi|292834486|gb|EFF92835.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. e14]
Length = 257
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 86/238 (36%), Positives = 127/238 (53%), Gaps = 7/238 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HIG+IMDGN RWA A G GHR G + E + +E ++ +T++ S
Sbjct: 23 LDHAQVPKHIGVIMDGNRRWAKASGSSTVHGHRAGADKIEEFLGWCSETDVEVVTLWLLS 82
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
+N+ RP E+ L+ +I+ ++ +V +G R L + LKEAE T
Sbjct: 83 TDNFDRPQEELVPLLGIIEDVVRSL---AADGRWRVHHVGTRDLLPSGMQAALKEAEAAT 139
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSDVP 180
G+ + +A Y R EI+ A++++ D V D VD +I ++L T P
Sbjct: 140 AEVDGILVNVAIGYGGRQEIADAVRSMLHDAHDRGVSMEDLAEAVDVDMIGRHLYTKAQP 199
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DPDL+IRT GE+RLS F+LWQ A+SE+ F +WP F + F AL Y R RR+GG
Sbjct: 200 DPDLVIRTSGEQRLSGFMLWQTAHSEYYFCEVFWPAFRKVDFLRALRDYAARHRRYGG 257
>gi|294012398|ref|YP_003545858.1| undecaprenyl pyrophosphate synthetase [Sphingobium japonicum UT26S]
gi|292675728|dbj|BAI97246.1| undecaprenyl pyrophosphate synthetase [Sphingobium japonicum UT26S]
Length = 246
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 96/228 (42%), Positives = 147/228 (64%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA R LPR AGHR G+E + AA E+G++ LT++AFS NW+RP
Sbjct: 19 RHVAIIMDGNGRWAKKRFLPRIAGHRAGVEAVRRVARAARELGLECLTLYAFSSENWKRP 78
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE+++L+ L++ F++ N +++R+IGN +LD ++ ++ A +T N+G
Sbjct: 79 ASEVTDLMGLLRHFIQSDLDEFHANGVRLRIIGNYRALDPSLVDLIDNAVARTAGNSGPI 138
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L IA NY ++DE+ R + + + + +G + + ++ + + L T+D+P DL+IRT GE
Sbjct: 139 LAIALNYGAQDELVRMAQTLARRVAAGEIAAEEIGIADVDAALYTADLPPLDLMIRTSGE 198
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+RLS+F+LWQ AY+E F WPDF AL+ + LRDRRFGGL
Sbjct: 199 QRLSNFMLWQAAYAELYFTDILWPDFDGRALAAALDAFRLRDRRFGGL 246
>gi|23464727|ref|NP_695330.1| undecaprenyl pyrophosphate synthase [Bifidobacterium longum
NCC2705]
gi|227546837|ref|ZP_03976886.1| undecaprenyl pyrophosphate synthetase [Bifidobacterium longum
subsp. infantis ATCC 55813]
gi|239620814|ref|ZP_04663845.1| undecaprenyl pyrophosphate synthetase [Bifidobacterium longum
subsp. infantis CCUG 52486]
gi|42559823|sp|Q8G7Y3|UPPS_BIFLO RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|23325294|gb|AAN23966.1| undecaprenyl pyrophosphate synthetase [Bifidobacterium longum
NCC2705]
gi|227212799|gb|EEI80680.1| undecaprenyl pyrophosphate synthetase [Bifidobacterium longum
subsp. infantis ATCC 55813]
gi|239516390|gb|EEQ56257.1| undecaprenyl pyrophosphate synthetase [Bifidobacterium longum
subsp. infantis CCUG 52486]
Length = 264
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 85/239 (35%), Positives = 138/239 (57%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + P HIG+IMDGNGRWA RG+ R GH+ V + +A A E G++ L+++
Sbjct: 26 IPDFPKNKVPRHIGVIMDGNGRWAKQRGMVRTNGHQAAEPVVFDTIAGAIEAGVRYLSLY 85
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
FS NW+R E+ L+ + + + + + ++VR G R L ++ L+ AE
Sbjct: 86 TFSTENWKRSPQEVRFLMGFSREIIHRRVEQMDEWGVRVRWSGRRPKLWKSVIDELEAAE 145
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T+ N +++ NY R EI+ A I +++ G + V +IA +L D+PD
Sbjct: 146 ERTKNNKVIDVVFCINYGGRAEIADACAAIAREVRDGKISGDRVTEKMIADHLYNPDIPD 205
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRT GE+R S+FL W+ AY+E F+PE +PD R++ + +++ Y RDRRFGG+
Sbjct: 206 CDLVIRTSGEQRTSNFLPWEAAYAELDFVPELFPDCGRDVLWRSIDHYIHRDRRFGGVK 264
>gi|58040245|ref|YP_192209.1| undecaprenyl pyrophosphate synthetase [Gluconobacter oxydans 621H]
gi|58002659|gb|AAW61553.1| Undecaprenyl pyrophosphate synthetase [Gluconobacter oxydans 621H]
Length = 235
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 97/229 (42%), Positives = 139/229 (60%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI +IMDGNGRWA AR LP AGHR+G E + V A G++ LT++AFS NWR
Sbjct: 4 VPVHIAMIMDGNGRWARARKLPVAAGHRQGAESVQQCVRTAIRQGVRYLTLYAFSSENWR 63
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ +L L++ +L+ L +++R+IG + + L+ AE T NT
Sbjct: 64 RSAEEVGDLTSLLRFYLRHKINELHAQGVRLRIIGEPERFEGSLREELRRAEALTLHNTT 123
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L +A +Y R +I +A + + +D +G + + + +++ L TSD+PDPDL+IRT
Sbjct: 124 LTLTLALSYGGRADIVQAARRLAEDAVAGKIAAESISEAMLDDALQTSDMPDPDLVIRTS 183
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GE RLS+FLLWQ AY+E VF+ WPDF F AL+++ R RRFGG
Sbjct: 184 GECRLSNFLLWQSAYAELVFMDVLWPDFGEVEFLEALSRFASRQRRFGG 232
>gi|227495130|ref|ZP_03925446.1| undecaprenyl pyrophosphate synthetase [Actinomyces coleocanis DSM
15436]
gi|226831582|gb|EEH63965.1| undecaprenyl pyrophosphate synthetase [Actinomyces coleocanis DSM
15436]
Length = 254
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 94/235 (40%), Positives = 139/235 (59%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P H+ IIMDGNGRWA RGLPR GHR+G + +A A E+G+K+LT++AFS N
Sbjct: 17 SGVPQHVAIIMDGNGRWANERGLPRTEGHRQGEIALMDTIAGAVEIGVKHLTVYAFSTEN 76
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRR E+ L+ + ++ L + +++ G R L ++ L+ A + T N
Sbjct: 77 WRRSPQEVRFLMGYSRDVIRCRATELNEWGVRINWWGRRPRLWKSVINELEAAHELTADN 136
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
T L+ +A NY R EI+ A+ + ++E+G + + + AK L PD DL+IR
Sbjct: 137 TALDFNMAVNYGGRAEITDAVNQVAHEVEAGRLTAGHISEGAFAKRLYAPGAPDVDLLIR 196
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE+R+S+FLLWQ AY+EF F P WP+++RE + + + R+RRFGG K
Sbjct: 197 TGGEQRISNFLLWQCAYAEFSFNPLPWPEYNREALWDDILAFTGRERRFGGAVDK 251
>gi|46190603|ref|ZP_00121247.2| COG0020: Undecaprenyl pyrophosphate synthase [Bifidobacterium
longum DJO10A]
gi|189438982|ref|YP_001954063.1| undecaprenyl pyrophosphate synthase [Bifidobacterium longum DJO10A]
gi|312132422|ref|YP_003999761.1| upps [Bifidobacterium longum subsp. longum BBMN68]
gi|317481605|ref|ZP_07940641.1| di-trans,poly-cis-decaprenylcistransferase [Bifidobacterium sp.
12_1_47BFAA]
gi|322689573|ref|YP_004209307.1| undecaprenyl pyrophosphate synthase [Bifidobacterium longum subsp.
infantis 157F]
gi|322691534|ref|YP_004221104.1| undecaprenyl pyrophosphate synthase [Bifidobacterium longum subsp.
longum JCM 1217]
gi|189427417|gb|ACD97565.1| Undecaprenyl pyrophosphate synthase [Bifidobacterium longum DJO10A]
gi|291516145|emb|CBK69761.1| Undecaprenyl pyrophosphate synthetase [Bifidobacterium longum
subsp. longum F8]
gi|311772916|gb|ADQ02404.1| UppS [Bifidobacterium longum subsp. longum BBMN68]
gi|316916965|gb|EFV38351.1| di-trans,poly-cis-decaprenylcistransferase [Bifidobacterium sp.
12_1_47BFAA]
gi|320456390|dbj|BAJ67012.1| undecaprenyl pyrophosphate synthase [Bifidobacterium longum subsp.
longum JCM 1217]
gi|320460909|dbj|BAJ71529.1| undecaprenyl pyrophosphate synthase [Bifidobacterium longum subsp.
infantis 157F]
Length = 262
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 85/239 (35%), Positives = 138/239 (57%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + P HIG+IMDGNGRWA RG+ R GH+ V + +A A E G++ L+++
Sbjct: 24 IPDFPKNKVPRHIGVIMDGNGRWAKQRGMVRTNGHQAAEPVVFDTIAGAIEAGVRYLSLY 83
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
FS NW+R E+ L+ + + + + + ++VR G R L ++ L+ AE
Sbjct: 84 TFSTENWKRSPQEVRFLMGFSREIIHRRVEQMDEWGVRVRWSGRRPKLWKSVIDELEAAE 143
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T+ N +++ NY R EI+ A I +++ G + V +IA +L D+PD
Sbjct: 144 ERTKNNKVIDVVFCINYGGRAEIADACAAIAREVRDGKISGDRVTEKMIADHLYNPDIPD 203
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRT GE+R S+FL W+ AY+E F+PE +PD R++ + +++ Y RDRRFGG+
Sbjct: 204 CDLVIRTSGEQRTSNFLPWEAAYAELDFVPELFPDCGRDVLWRSIDHYIHRDRRFGGVK 262
>gi|213691678|ref|YP_002322264.1| undecaprenyl diphosphate synthase [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|213523139|gb|ACJ51886.1| undecaprenyl diphosphate synthase [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|320457769|dbj|BAJ68390.1| undecaprenyl pyrophosphate synthase [Bifidobacterium longum subsp.
infantis ATCC 15697]
Length = 262
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 85/239 (35%), Positives = 138/239 (57%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + P HIG+IMDGNGRWA RG+ R GH+ V + +A A E G++ L+++
Sbjct: 24 IPDFPKNKVPRHIGVIMDGNGRWAKQRGMIRTNGHQAAEPVVFDTIAGAIEAGVRYLSLY 83
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
FS NW+R E+ L+ + + + + + ++VR G R L ++ L+ AE
Sbjct: 84 TFSTENWKRSPQEVRFLMGFSREIIHRRVEQMDEWGVRVRWSGRRPKLWKSVIDELEAAE 143
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T+ N +++ NY R EI+ A I +++ G + V +IA +L D+PD
Sbjct: 144 ERTKNNKVIDVVFCINYGGRAEIADACAAIAREVRDGKISGDRVTEKMIADHLYNPDIPD 203
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRT GE+R S+FL W+ AY+E F+PE +PD R++ + +++ Y RDRRFGG+
Sbjct: 204 CDLVIRTSGEQRTSNFLPWEAAYAELDFVPELFPDCGRDVLWRSIDHYIHRDRRFGGVK 262
>gi|317508572|ref|ZP_07966233.1| di-trans,poly-cis-decaprenylcistransferase [Segniliparus rugosus
ATCC BAA-974]
gi|316253116|gb|EFV12525.1| di-trans,poly-cis-decaprenylcistransferase [Segniliparus rugosus
ATCC BAA-974]
Length = 259
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 83/235 (35%), Positives = 133/235 (56%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ S + P H+ +IMDGNGRWA RGLPR GH++G V ++V + E+G+ L+ +AF
Sbjct: 24 QLPSGAVPKHVALIMDGNGRWAQQRGLPRTEGHKRGESVLMDLVHGSLEIGVTWLSAYAF 83
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW R SE+ L+ + +++ + + +++R G R L ++ L+ A +
Sbjct: 84 STENWSRSPSEVKFLMGFNRDVIRRRRDEMHELGVRIRWAGRRPRLWRSVIAELESAMEL 143
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ NT +NL + NY +R E++ A I + G + + + K+L D+PD D
Sbjct: 144 TKRNTKMNLVMCVNYGARAELADAASRIGALAKEGKLNPDKLTEEGLRKFLYVPDMPDVD 203
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L++R GE R+S+FLLWQ AY+E V + +PD R + A +Y R+RRFG
Sbjct: 204 LMLRPSGEMRVSNFLLWQSAYAELVVQDKLFPDIDRRDLWAACEEYARRNRRFGK 258
>gi|48478450|ref|YP_024156.1| undecaprenyl pyrophosphate synthetase [Picrophilus torridus DSM
9790]
gi|73920271|sp|Q6KZ89|UPPS_PICTO RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|48431098|gb|AAT43963.1| undecaprenyl pyrophosphate synthetase [Picrophilus torridus DSM
9790]
Length = 255
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 90/239 (37%), Positives = 129/239 (53%), Gaps = 2/239 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + P H+GII DGN R+A + G+ GH KG E E++ + EVGI +T+
Sbjct: 16 LLEEIKKHPVPGHLGIITDGNRRYARSIGISENEGHVKGKEKLEEVLNWSMEVGIHMVTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFS N++R E++ L LI + KN I+V+VIG+ L D + +K
Sbjct: 76 YAFSTENFKRKSDEVNFLFNLINDAFIDLLNDERVYKNGIRVKVIGDISKLPDYLKETIK 135
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
E +T +A Y R EI AIK I QDI +G + +++ + YL
Sbjct: 136 RVEGETNKFKNFRFNLAIGYGGRQEIIDAIKKIGQDILNGKIKVDNINEEMFRSYLYDKT 195
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+PDPDLI+RT GE+R+S+FLLWQ AYSE F WP+ + F A+ Y R RRFG
Sbjct: 196 LPDPDLILRTSGEERISNFLLWQSAYSELYFADVNWPELRKIDFLRAIYSYQNRKRRFG 254
>gi|118618889|ref|YP_907221.1| long (C50) chain Z-isoprenyl diphosphate synthase [Mycobacterium
ulcerans Agy99]
gi|183983651|ref|YP_001851942.1| long (C50) chain Z-isoprenyl diphosphate synthase [Mycobacterium
marinum M]
gi|118570999|gb|ABL05750.1| long (C50) chain Z-isoprenyl diphosphate synthase [Mycobacterium
ulcerans Agy99]
gi|183176977|gb|ACC42087.1| long (C50) chain Z-isoprenyl diphosphate synthase [Mycobacterium
marinum M]
Length = 296
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 85/234 (36%), Positives = 138/234 (58%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P+H+ I+MDGNGRWA RGL R GH+ G V +I A E+GIK L+++AF
Sbjct: 61 RIPADRLPNHVAIVMDGNGRWATERGLRRTEGHKMGEAVVIDIACGAVELGIKWLSLYAF 120
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + +++ L + +++R +G+R L ++ L AE
Sbjct: 121 STENWKRSAEEVRFLMGFNRDVVRRRRDVLNQMGVRIRWVGSRPRLWRSVINELAVAEAM 180
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T N + + NY R EI+ A ++I +++ +G + + S IA+++ D+PD D
Sbjct: 181 TNNNDVITINYCVNYGGRTEIAEATRDIAREVAAGRLNPERITESTIARHMQRPDIPDVD 240
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
L +RT GE+R S+F+LWQ AY+E++F + WPD+ R + A +Y R+RRFG
Sbjct: 241 LFLRTSGEQRSSNFMLWQSAYAEYIFQDKLWPDYDRRDLWAACEEYASRNRRFG 294
>gi|296454501|ref|YP_003661644.1| undecaprenyl diphosphate synthase [Bifidobacterium longum subsp.
longum JDM301]
gi|296183932|gb|ADH00814.1| undecaprenyl diphosphate synthase [Bifidobacterium longum subsp.
longum JDM301]
Length = 262
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 86/239 (35%), Positives = 138/239 (57%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + P HIG+IMDGNGRWA RG+ R GH+ V + +A A E G++ L+++
Sbjct: 24 IPDFPKNKVPRHIGVIMDGNGRWAKQRGMVRTNGHQAAEPVVFDTIAGAIEAGVRYLSLY 83
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
FS NW+R E+ L+ + + + + + ++VR G R L ++ L+ AE
Sbjct: 84 TFSTENWKRSPQEVRFLMGFSREIIHRRVEQMDEWGVRVRWSGRRPKLWKSVIDELEAAE 143
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T+ N +++ NY R EI+ A I +++ G + V +IA +L DVPD
Sbjct: 144 ERTKNNKVIDVVFCINYGGRAEIADACAAIAREVRDGKISGDRVTEKMIADHLYNPDVPD 203
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRT GE+R S+FL W+ AY+E F+PE +PD R++ + +++ Y RDRRFGG+
Sbjct: 204 CDLVIRTSGEQRTSNFLPWEAAYAELDFVPELFPDCGRDVLWRSIDHYIHRDRRFGGVK 262
>gi|227543024|ref|ZP_03973073.1| undecaprenyl pyrophosphate synthase [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227181246|gb|EEI62218.1| undecaprenyl pyrophosphate synthase [Corynebacterium
glucuronolyticum ATCC 51866]
Length = 246
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 90/231 (38%), Positives = 135/231 (58%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P+HI ++MDGNGRWA RG+ R GH++G V +I+ A E+GI +L+ +AFS NWR
Sbjct: 16 LPNHIALVMDGNGRWAQERGMVRTEGHKRGEAVLMDIIDACLELGIPHLSAYAFSTENWR 75
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ L+ + L + L + ++VR G R L ++ L+ AE+ T+ NT
Sbjct: 76 RTADEVRFLMGFNRDVLHRQRDVLNEKGVRVRWAGRRPRLWRSVIRELELAEEMTKENTR 135
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ ++ NY R EI A + I + ++G++ V A++LD +PD DL +R
Sbjct: 136 MTFYMCVNYGGRAEIVDAAREIARRAQAGTLRPEQVTEKTFAQFLDEPGMPDVDLFLRPS 195
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
GEKR S+FLLWQ AY+E V+ +PDF++E + A +Y RDRRFGG
Sbjct: 196 GEKRTSNFLLWQSAYAEMVYQNTLFPDFTKENLYDACLEYAKRDRRFGGTK 246
>gi|254524068|ref|ZP_05136123.1| undecaprenyl pyrophosphate synthetase 1 [Stenotrophomonas sp.
SKA14]
gi|219721659|gb|EED40184.1| undecaprenyl pyrophosphate synthetase 1 [Stenotrophomonas sp.
SKA14]
Length = 236
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 94/225 (41%), Positives = 130/225 (57%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA R PR GHR G N + E+GI LT+FAFS NW RP E+
Sbjct: 1 MDGNGRWAQQRRRPRVIGHRAGARAVNRTIERCLELGIPALTLFAFSSENWGRPQEEVDA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+KL L + L + ++VR IG R ++ ++ AE +T NT L L IA +
Sbjct: 61 LMKLFLGALDREVDELHRRGVRVRFIGERERFGAGLVSRMQLAEQRTADNTTLTLSIAAS 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I+RA + + ++ +G + +D SL+ + +D+P PDL IRTGG+ R+S+F
Sbjct: 121 YGGRQDIARAARALAVEVAAGRLLPEQIDESLLGSQVALADLPTPDLFIRTGGDTRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
LLWQ+AY+E F WPDF EL AL+ Y R+RRFG S +
Sbjct: 181 LLWQLAYTELWFTEALWPDFDAELLQQALDAYASRERRFGLTSAQ 225
>gi|18424146|ref|NP_568883.1| dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase,
putative [Arabidopsis thaliana]
gi|75244417|sp|Q8GY03|DDPS4_ARATH RecName: Full=Dehydrodolichyl diphosphate synthase 4;
Short=Dedol-PP synthase 4
gi|26450940|dbj|BAC42577.1| putative mzn1 dehydrodolichyl diphosphate synthase [Arabidopsis
thaliana]
gi|28950851|gb|AAO63349.1| At5g58782 [Arabidopsis thaliana]
gi|332009715|gb|AED97098.1| dehydrodolichyl diphosphate synthase 4 [Arabidopsis thaliana]
Length = 289
Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats.
Identities = 92/236 (38%), Positives = 130/236 (55%), Gaps = 2/236 (0%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P H+ +IMDGN RWA GL G+ G + E ++GI ++ FAF
Sbjct: 51 ELQRELMPRHVAVIMDGNRRWAKQTGLLTSQGYEAGAKRLLEFADLCFKLGINTVSAFAF 110
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW R E+ L+ L + +LK + I+V VIGN + + +L + E E+
Sbjct: 111 STENWGRHKIEVKCLMYLFQRYLKSKIQFFQSKEIRVSVIGNLAKIPESLLRTVHELEEA 170
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS--DVPD 181
T+ +L +A +YS R +I A KNI + E G + DVD +L + L T + P
Sbjct: 171 TKSYKKKHLILAIDYSGRFDILGACKNIVKKSEQGLIREEDVDETLFERELQTRCTEFPS 230
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDL+IRT GE+R+S+F LWQ+AY+EF F P WPDF ++ F AL Y RDRRFG
Sbjct: 231 PDLLIRTSGEQRISNFFLWQLAYTEFFFSPVLWPDFDKQKFIEALVSYQRRDRRFG 286
>gi|291456392|ref|ZP_06595782.1| di-trans,poly-cis-decaprenylcistransferase [Bifidobacterium breve
DSM 20213]
gi|291381669|gb|EFE89187.1| di-trans,poly-cis-decaprenylcistransferase [Bifidobacterium breve
DSM 20213]
Length = 264
Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 85/239 (35%), Positives = 137/239 (57%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + P H+G+IMDGNGRWA RG+ R GH+ V + +A A E G++ L+++
Sbjct: 26 IPDFPKNKVPRHVGVIMDGNGRWAKQRGMIRTNGHQAAEPVVFDTIAGAIEAGVRYLSLY 85
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
FS NW+R E+ L+ + + + + + ++VR G R L ++ L+ A
Sbjct: 86 TFSTENWKRSPQEVRFLMGFSREIIHRRVAQMDEWGVRVRWSGRRPKLWKSVIDELEVAM 145
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T+ N +++ NY R EI+ A I +++ G + V ++A +L D+PD
Sbjct: 146 ERTKNNKVIDVVFCINYGGRAEIADACAAIAREVRDGRISGDRVTEKMVADHLYNPDIPD 205
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRT GE+R S+FL WQ AY+E F+PE +PD RE+ + A++ Y RDRRFGG+
Sbjct: 206 CDLVIRTSGEQRTSNFLPWQAAYAELDFVPELFPDCGREVLWRAIDNYIHRDRRFGGVK 264
>gi|327187690|dbj|BAK09180.1| Z-prenyltransferase 2 [Mycobacterium chlorophenolicum]
Length = 298
Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 86/235 (36%), Positives = 134/235 (57%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P H+ ++MDGNGRWA RGL R GH+ G V +I A E+GIK+LT++AF
Sbjct: 63 QIPADQVPQHVAVVMDGNGRWATQRGLGRTEGHKMGEAVLIDITCGAIELGIKHLTVYAF 122
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + +++ +L +++R +G+R + ++ AE+
Sbjct: 123 STENWKRSTDEVRFLMGFNREVVRRRRENLNDMGVRMRWVGSRPRMWRSVIKEFDIAEEM 182
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T N + + NY R EI A + + Q+ G + + + AK+L +D+PD
Sbjct: 183 TVDNDVITINYCVNYGGRTEIVEAARQLAQEAVDGKINPARISEASFAKHLHRADIPDVG 242
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L IRT GE+R S+FLLWQVAY+E+VF + WPD+ R + A +Y R+RRFG
Sbjct: 243 LFIRTSGEQRASNFLLWQVAYAEYVFQDKLWPDYDRRDLWAACEEYVHRNRRFGR 297
>gi|284990197|ref|YP_003408751.1| undecaprenyl diphosphate synthase [Geodermatophilus obscurus DSM
43160]
gi|284063442|gb|ADB74380.1| undecaprenyl diphosphate synthase [Geodermatophilus obscurus DSM
43160]
Length = 250
Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 91/234 (38%), Positives = 133/234 (56%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P H+ I+MDGNGRWA RGLPR AGH G + V A E+G+ ++ +AF
Sbjct: 15 QLPPDRVPGHVAIVMDGNGRWAKQRGLPRTAGHEAGESSLFDCVEGAIELGVTAISAYAF 74
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRR E+ L+ + +++ + + ++VR G R L ++ L+ AE+
Sbjct: 75 STENWRRSPDEVRFLMGFNRDVIRRRRDEMHELGVRVRWAGRRPRLWRSVIKELEVAEEL 134
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N L L + NY R EI+ A I +++ +G + VD +A++LD D+PD D
Sbjct: 135 TKDNDVLTLTMCVNYGGRAEIADAAAAIAREVAAGRLDPAKVDEGTVARFLDEPDMPDVD 194
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
L +R+ GE R S+FLLWQ AY+EFVF+ WPDF R + A +Y R RRFG
Sbjct: 195 LFVRSSGENRTSNFLLWQSAYAEFVFLDTLWPDFDRRHLWAACEEYASRQRRFG 248
>gi|156937379|ref|YP_001435175.1| undecaprenyl pyrophosphate synthetase [Ignicoccus hospitalis
KIN4/I]
gi|156566363|gb|ABU81768.1| Undecaprenyl pyrophosphate synthetase [Ignicoccus hospitalis
KIN4/I]
Length = 270
Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 93/241 (38%), Positives = 133/241 (55%), Gaps = 3/241 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ A + P H+ II DGN RWA RGL GHR+G + E++ E+GI+ +T+
Sbjct: 30 LEAEISKDHLPKHVAIIPDGNRRWARMRGLQEWLGHREGYKKMREVLMWLLELGIEVVTV 89
Query: 61 FAFSINNW-RRPVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVL 117
FA S N RR E +L +LI L++ + +N +KV VIG R ++L
Sbjct: 90 FAMSTENCTRRSPEEREKLYELIAGGLRELAKDEIVHRNEVKVMVIGRRNLWPKELLEAA 149
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
KE E+ T+ + +A Y R EI A++ I ++ G + +D ++I ++L T
Sbjct: 150 KEVEEATKGYNKRVINVAVCYGGRQEIVDAVRKIAWKVKRGELEPDQIDENVITQHLYTE 209
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
++PDPDLIIRT GE+R+S+FLLWQ AYSE F YWP+ R AL Y R RRFG
Sbjct: 210 NLPDPDLIIRTSGEERISNFLLWQSAYSELYFANIYWPEIRRIDILRALRDYQRRQRRFG 269
Query: 238 G 238
Sbjct: 270 R 270
>gi|224825017|ref|ZP_03698123.1| undecaprenyl diphosphate synthase [Lutiella nitroferrum 2002]
gi|224602688|gb|EEG08865.1| undecaprenyl diphosphate synthase [Lutiella nitroferrum 2002]
Length = 227
Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 94/225 (41%), Positives = 135/225 (60%), Gaps = 6/225 (2%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA R LPR AGH+KG+ E+V+ E+G++ LT+FAFS NWRRP E+S
Sbjct: 1 MDGNGRWAKKRFLPRVAGHKKGLSAVREVVSGCQELGVEYLTLFAFSTENWRRPQDEVSF 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ L L+ L NNI ++VIG+R I+ ++ AE +T N GL L IA +
Sbjct: 61 LMDLFLGALENEVEKLHSNNICLKVIGDRSRFAPRIVERIEAAEARTAANGGLVLTIAAD 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R ++ +A+ + ++ + + +A L + P+PDL IRTGGE+R+S+F
Sbjct: 121 YGGRWDMLQAVNRLIREGATA------ITEEALAGRLSMAYAPEPDLFIRTGGEQRISNF 174
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
LLWQ+AYSE F WPDF ++ A+ Y R+RRFG S++
Sbjct: 175 LLWQLAYSELYFTDLLWPDFDKQALEGAVQSYRCRERRFGRTSEQ 219
>gi|328884741|emb|CCA57980.1| Undecaprenyl pyrophosphate synthetase [Streptomyces venezuelae ATCC
10712]
Length = 253
Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 82/239 (34%), Positives = 127/239 (53%), Gaps = 7/239 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ + P HIG+I+DGN RWA A G GH+ G + E++ AE ++ +T++
Sbjct: 17 GRLDHAQVPKHIGVILDGNRRWAKASGGTPEQGHKAGADKIQELLGWCAETDVEVVTLWM 76
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
S +N RP ++ L+ +I++ ++ +V +G L VLKEAE
Sbjct: 77 LSTDNLNRPEEQLVPLLGIIENAVR---ALAADGRWRVNHVGTMDLLPSRTQSVLKEAEQ 133
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSD 178
T NTG+ + +A Y R EI+ A++++ + + VD I+++L T
Sbjct: 134 ATHDNTGILVNVAVGYGGRQEIADAVRSLLLEHAERGTSFEELAEIVDVEHISEHLYTRG 193
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDPDL+IRT GE+RLS F+LWQ A+SE+ F +WP F + F AL Y R RR+G
Sbjct: 194 QPDPDLVIRTSGEQRLSGFMLWQSAHSEYYFCEVHWPAFRKVDFLRALRDYAARHRRYG 252
>gi|170760590|ref|YP_001786188.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum
A3 str. Loch Maree]
gi|169407579|gb|ACA55990.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum
A3 str. Loch Maree]
Length = 239
Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 89/222 (40%), Positives = 132/222 (59%), Gaps = 1/222 (0%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HI I+ DGNGRWA +G PR GH+ G + I +E+G++ LT + FS NW
Sbjct: 15 KIPKHIAIVCDGNGRWAKKKGFPRTFGHKAGTKPIENITKICSELGVEVLTFYVFSTENW 74
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E++ L+KL F K + + NI+V+ IG + +L +++ +K+ E T N
Sbjct: 75 NRPDEEVNFLMKLFVEFFIKLRNEVGQ-NIRVKHIGIKNNLSSELIDEIKKTESLTESNP 133
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
G+ L IA NY SR EI A KNI D++ G++ + +++ L + Y+ TS +PD DLIIRT
Sbjct: 134 GMILNIALNYGSRLEIINAAKNIMHDMDVGNLNADEMNEDLFSNYMSTSGLPDVDLIIRT 193
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
GE R+S+FLLWQ ++ F ++WPDF + A+ YN
Sbjct: 194 SGEIRISNFLLWQSIKAKLWFTDDFWPDFKYDHLKQAIRHYN 235
>gi|238021665|ref|ZP_04602091.1| hypothetical protein GCWU000324_01568 [Kingella oralis ATCC 51147]
gi|237866279|gb|EEP67321.1| hypothetical protein GCWU000324_01568 [Kingella oralis ATCC 51147]
Length = 228
Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 90/225 (40%), Positives = 134/225 (59%), Gaps = 6/225 (2%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA R LPR GH+KG++V I + G++ LT+FAFS NWRRP E+S
Sbjct: 1 MDGNGRWAKKRFLPRAMGHKKGLDVLENICHICNDAGVRYLTVFAFSTENWRRPADEVSF 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ L L+K + + ++++VIG+R +I + +AE T NTGL L IA +
Sbjct: 61 LMGLFLVALQKKVIQMNEKGVRLKVIGDRSRFSAEIQQSIIDAEALTANNTGLTLTIAAD 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I +A + + ++ + + +A L ++ P+PDL IRTGGE R+S+F
Sbjct: 121 YGGRWDILQAANALIAEGKTH------ISEADLASRLMLAEAPEPDLFIRTGGETRISNF 174
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+LWQ+AY+EF F P WPDF++ A + R+RRFG S++
Sbjct: 175 MLWQMAYAEFYFTPVLWPDFNQAEMQKAFASFTQRERRFGRTSEQ 219
>gi|302869286|ref|YP_003837923.1| undecaprenyl diphosphate synthase [Micromonospora aurantiaca ATCC
27029]
gi|315504239|ref|YP_004083126.1| undecaprenyl diphosphate synthase [Micromonospora sp. L5]
gi|302572145|gb|ADL48347.1| undecaprenyl diphosphate synthase [Micromonospora aurantiaca ATCC
27029]
gi|315410858|gb|ADU08975.1| undecaprenyl diphosphate synthase [Micromonospora sp. L5]
Length = 270
Score = 259 bits (661), Expect = 4e-67, Method: Composition-based stats.
Identities = 88/226 (38%), Positives = 129/226 (57%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ I+MDGNGRWA RGLPR GH +G + V A E+GI L+ +AFS NWRR
Sbjct: 35 HVAIVMDGNGRWAKERGLPRTKGHEQGEHSLFDAVEGAIEMGIPYLSAYAFSTENWRRSP 94
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+ L+ + +++ L ++V G L ++ L+ AE+ +R N+ L L
Sbjct: 95 DEVRFLMGFNRDVIRRRRDQLVDLGVRVVWSGRAGRLWKSVISELQTAEEMSRGNSTLTL 154
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
NY + EI+ A I +D+ +G + V+ +A+YL +VP+ DL +R GE+
Sbjct: 155 QFCVNYGGQAEIADAAAGIARDVAAGRLDPAKVNEKTVARYLYHPEVPEVDLFLRPSGEQ 214
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R+S+FLLWQ AY+E V++ WPDF R ++A Y RDRRFGG
Sbjct: 215 RISNFLLWQTAYAELVYLDTLWPDFDRRHLWYACELYAQRDRRFGG 260
>gi|86160003|ref|YP_466788.1| undecaprenyl pyrophosphate synthetase [Anaeromyxobacter
dehalogenans 2CP-C]
gi|85776514|gb|ABC83351.1| Undecaprenyl pyrophosphate synthetase [Anaeromyxobacter
dehalogenans 2CP-C]
Length = 251
Score = 259 bits (661), Expect = 4e-67, Method: Composition-based stats.
Identities = 88/242 (36%), Positives = 130/242 (53%), Gaps = 6/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ A + + P H+ IIMDGNGRWA RGLPR AGHR+G E + AA VG++ LT+
Sbjct: 9 LEARVRARPLPRHVAIIMDGNGRWAENRGLPRVAGHREGSEAVRAVTRAARRVGLEALTL 68
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP E+ L++L+ +L+ + +N I++ IG L D + L A
Sbjct: 69 YAFSSENWARPDEEVGALMQLLADYLESERAEMMQNGIRLNAIGELDRLPDFVRERLDAA 128
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+T N + L +A +Y R E+ + + +D+ + L T +P
Sbjct: 129 RAETAANDRMVLTLALSYGGRQELVH------AARAAAAARGTALDAEDLEAALWTRGLP 182
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
+ DL++RT GE+R+S+FLLWQ AY+E F WPDF F A+ + R RRFG
Sbjct: 183 ELDLLVRTSGERRISNFLLWQCAYAELYFSEVLWPDFRDAALFEAIADFQRRQRRFGLTG 242
Query: 241 KK 242
+
Sbjct: 243 AQ 244
>gi|332287131|ref|YP_004422032.1| undecaprenyl pyrophosphate synthase [Chlamydophila psittaci 6BC]
gi|313847727|emb|CBY16717.1| putative peptidoglycan synthetasis protein [Chlamydophila psittaci
RD1]
gi|325507074|gb|ADZ18712.1| undecaprenyl pyrophosphate synthase [Chlamydophila psittaci 6BC]
gi|328914371|gb|AEB55204.1| undecaprenyl diphosphate synthase [Chlamydophila psittaci 6BC]
Length = 250
Score = 259 bits (661), Expect = 4e-67, Method: Composition-based stats.
Identities = 95/240 (39%), Positives = 136/240 (56%), Gaps = 4/240 (1%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARG----LPRCAGHRKGIEVFNEIVAAAAEVGIKNL 58
AS+ S P H+ IIMDGN RW + R +GH G +V +I+ +A +GI+ L
Sbjct: 11 ASLSMQSLPKHVAIIMDGNRRWYQQHQTQCSVKRSSGHYYGAKVLPKIIESAFSLGIEVL 70
Query: 59 TIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
T+FAFS N+ R E++EL L S L + L +N I++R IGN L+L + +
Sbjct: 71 TLFAFSTENFLRSAEEVAELFSLFHSQLDEQLPYLIENKIRLRCIGNLLALPHYLQKQIS 130
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
+ ++T+ + L +A NY +DE+ RA K + D+ + + V LI YLDTS+
Sbjct: 131 KVAEETQGHGIRELVLAINYGGKDELVRAFKKLHHDLVNKKISLDSVSEELIRLYLDTSE 190
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+PDPDL+IRTGGE R+S+FLLWQ+AY+E WPDF A+ Y R RR G
Sbjct: 191 IPDPDLLIRTGGEMRVSNFLLWQIAYTELYVTDVLWPDFKPYHLLDAIKAYQHRSRRGGK 250
>gi|147906875|ref|NP_001079475.1| hypothetical protein LOC379162 [Xenopus laevis]
gi|27882611|gb|AAH43759.1| MGC52912 protein [Xenopus laevis]
gi|115528273|gb|AAI24854.1| MGC52912 protein [Xenopus laevis]
Length = 332
Score = 259 bits (661), Expect = 4e-67, Method: Composition-based stats.
Identities = 82/234 (35%), Positives = 133/234 (56%), Gaps = 4/234 (1%)
Query: 1 MVASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ A+++ + P P H+ IMDGN R+A + R GH +G E E + +GI +T
Sbjct: 15 LCANVLKAGPIPKHVAFIMDGNRRYAKKCHVERQEGHSQGFEKLAETLRWCLNLGICEVT 74
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCV 116
++AFSI N++R E+ L++L + + L+K+ +++RV+G+ L DI +
Sbjct: 75 VYAFSIENFKRSAEEVEGLLELARQKFTRLLEEKDKLEKHGVRIRVLGDLTLLPLDIQKL 134
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT 176
+ +A +TR + L + F Y+SR EI+ AI+ ++ G + DV SL+ + L T
Sbjct: 135 IAQAVLETRAYSKCFLNVCFAYTSRHEITNAIREAAWGVQEGLLDPRDVTESLLDQCLYT 194
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
+ P+PDL+IRT GE RLSDFLLWQ +YS VF WP+++ A+ +Y
Sbjct: 195 AKSPEPDLLIRTSGEVRLSDFLLWQTSYSCLVFQSVLWPEYTFWNLCEAILRYQ 248
>gi|297564922|ref|YP_003683894.1| undecaprenyl diphosphate synthase [Meiothermus silvanus DSM 9946]
gi|296849371|gb|ADH62386.1| undecaprenyl diphosphate synthase [Meiothermus silvanus DSM 9946]
Length = 278
Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats.
Identities = 87/244 (35%), Positives = 130/244 (53%), Gaps = 6/244 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + P H+G+I+DGN R+A + GL GH G+ E++ E+GI+ +T+
Sbjct: 35 LESEVRGGHVPKHLGMILDGNRRFARSLGLEGHQGHEFGVAKAYEVLEWCLELGIRTVTV 94
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+ FS +NW R E+ L+ L ++ + N ++V+VIG R +L L+
Sbjct: 95 WVFSTDNWSRSQKEVETLMNLFVKEARRMAVDPRIHANEVRVKVIGRRDRFPPKVLEALE 154
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYL 174
E E T + G+ L IA Y R+EI A+K + + ++ S L I + L
Sbjct: 155 ELERTTEQHEGMLLQIAMGYGGREEIVDAVKALLLEAAQTGKSPEELASELDIEHIGERL 214
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
T+ VPDPD IIRT GE RLS FLLWQ A+SE+ F +WP F + F A+ Y R+R
Sbjct: 215 YTAGVPDPDFIIRTSGEVRLSGFLLWQSAHSEYYFFDAFWPAFRKVDFLRAIRSYQGRER 274
Query: 235 RFGG 238
RFG
Sbjct: 275 RFGR 278
>gi|47085975|ref|NP_998352.1| dehydrodolichyl diphosphate synthase [Danio rerio]
gi|45501137|gb|AAH67175.1| Dehydrodolichyl diphosphate synthase [Danio rerio]
Length = 335
Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats.
Identities = 84/238 (35%), Positives = 137/238 (57%), Gaps = 4/238 (1%)
Query: 1 MVASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ A+++ + P P H+ IMDGN R+A R GH +G E E + +GI +T
Sbjct: 15 LTANILKAGPMPKHVAFIMDGNRRYAQKEHKERQEGHTQGFEKLAETLRWCLNLGIHEVT 74
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKK---GFYSLKKNNIKVRVIGNRLSLDDDILCV 116
++AFSI N++R E+ L++L + + +L+K+ + +RV+G+ L +D+ +
Sbjct: 75 VYAFSIENFKRSKEEVDGLMELARQKFSRLLTEQENLEKHGVCIRVLGDLTLLPEDLQTL 134
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT 176
+ +A TR + L + F Y+SR EI+ A+K + +E G + S DV L+++ L +
Sbjct: 135 IAKAVVSTRAHNKCFLNVCFAYTSRHEIANAVKEMAWGVEQGLIKSSDVSEVLLSECLYS 194
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
S+ P+PDL+IRT GE RLSDFLLWQ +YS VF WP++S A+ Q+ + R
Sbjct: 195 SNSPNPDLLIRTSGEVRLSDFLLWQTSYSCLVFQSVLWPEYSFWNLCEAILQFQMSHR 252
>gi|293189545|ref|ZP_06608265.1| di-trans,poly-cis-decaprenylcistransferase [Actinomyces
odontolyticus F0309]
gi|292821635|gb|EFF80574.1| di-trans,poly-cis-decaprenylcistransferase [Actinomyces
odontolyticus F0309]
Length = 274
Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats.
Identities = 87/233 (37%), Positives = 136/233 (58%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
P+H+ +IMDGNGRWA +RGL R GHR G + +A A + G++ L+++ FS
Sbjct: 34 RKGEVPEHVALIMDGNGRWANSRGLARTEGHRAGEYALMDTIAGAIDAGVRYLSVYTFST 93
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+R +E+S ++ L + L + + VR G R L ++ L++A+ T
Sbjct: 94 ENWKRSPAEVSFIMNYASDVLARRTDQLAQWGVHVRWSGRRPKLWKSVINALEKADRATS 153
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
L+L + NY R E++ A ++I + + +G + V ++++L DVPD DL+
Sbjct: 154 HCKALDLIMCVNYGGRAELADAARSIAEGVAAGRLSPRGVTEKTLSRHLYLPDVPDVDLM 213
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
IRT GE+RLS++LLWQ+AY+E +F+ WP F RE + L +Y RDRRFGG
Sbjct: 214 IRTSGEQRLSNYLLWQMAYAEMMFVNIPWPAFDREELWGCLEEYAGRDRRFGG 266
>gi|126436038|ref|YP_001071729.1| undecaprenyl pyrophosphate synthetase [Mycobacterium sp. JLS]
gi|126235838|gb|ABN99238.1| Undecaprenyl pyrophosphate synthetase [Mycobacterium sp. JLS]
Length = 298
Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats.
Identities = 86/235 (36%), Positives = 132/235 (56%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P H+ ++MDGNGRWA RGL R GH+ G V +I A E+GIK+LT++AF
Sbjct: 63 KIPADQVPQHVAVVMDGNGRWATQRGLGRTEGHKMGEAVLIDITCGAIEIGIKHLTVYAF 122
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + +++ +L +++R +G+R + + AE+
Sbjct: 123 STENWKRSTEEVRFLMGFNREVVRRRRENLNDMGVRMRWVGSRPRMWRSVSKEFDIAEEM 182
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T N + + NY R EI A + + Q+ G V + + A++L D+PD D
Sbjct: 183 TVDNDVITINYCVNYGGRTEIVEAARQLAQEAVDGKVNPSRIAEAAFARHLHRPDIPDVD 242
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L IRT GE+R S+FLLWQ AY+E+VF + WPD+ R + A +Y R+RRFG
Sbjct: 243 LFIRTSGEQRASNFLLWQSAYAEYVFQDKLWPDYDRRDLWAACEEYVSRNRRFGR 297
>gi|62184817|ref|YP_219602.1| putative peptidoglycan synthetasis protein [Chlamydophila abortus
S26/3]
gi|73920257|sp|Q5L6U0|UPPS_CHLAB RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|62147884|emb|CAH63631.1| putative peptidoglycan synthetasis protein [Chlamydophila abortus
S26/3]
Length = 250
Score = 258 bits (660), Expect = 5e-67, Method: Composition-based stats.
Identities = 94/240 (39%), Positives = 134/240 (55%), Gaps = 4/240 (1%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARG----LPRCAGHRKGIEVFNEIVAAAAEVGIKNL 58
AS+ S P H+ IIMDGN RW + +GH G +V I+ +A +GI+ L
Sbjct: 11 ASLSMQSLPKHVAIIMDGNRRWYRQHQAQCSIKSSSGHYYGAKVLPNIIESAFSLGIEVL 70
Query: 59 TIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
T+FAFS N+ R E++EL L + L + L +N I++R IGN L+L D+ +
Sbjct: 71 TLFAFSTENFLRSAEEVAELFSLFHAQLDEQLPYLIENKIRLRCIGNLLALPPDLQQQIA 130
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
+ +T+ + L +A NY +DE+ RA K + D+ + + V LI YLDTS+
Sbjct: 131 KVASETQRHGMRELVLAINYGGKDELVRAFKKLHHDLVNKKISLDSVSEELIRLYLDTSE 190
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+PDPDL+IRTGGE R+S+FLLWQ+AY+E WPDF A+ Y R RR G
Sbjct: 191 IPDPDLLIRTGGEMRVSNFLLWQIAYTELYVTDVLWPDFKPYHLLDAIKAYQHRSRRGGK 250
>gi|300780722|ref|ZP_07090576.1| Di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
genitalium ATCC 33030]
gi|300532429|gb|EFK53490.1| Di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
genitalium ATCC 33030]
Length = 245
Score = 258 bits (660), Expect = 5e-67, Method: Composition-based stats.
Identities = 87/240 (36%), Positives = 138/240 (57%), Gaps = 1/240 (0%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVG-IKNLTI 60
+ + + P HI ++MDGNGRWA RG+PR GHR G +V ++V A E+G ++ L+
Sbjct: 6 IPDIPAELFPRHIALVMDGNGRWAQERGMPRTEGHRVGEKVLMDMVDACIEMGGVEWLSA 65
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NWRR E+ L+ + ++ L N+++ +G R L ++ L+ A
Sbjct: 66 YTFSTENWRRSREEVRFLMGFSREVMRAERDQLHAKNVRIVWVGRRPRLWRSVIRELEAA 125
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E+ T+ NTGL L + NY R E+ A + I Q G + ++ +A+++ D+P
Sbjct: 126 EEMTKNNTGLTLAMCINYGGRAELIDATRTIAQLASEGKLAPGEISEETLARFMYRPDMP 185
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
D D+ +R GE+R S+FLLWQ AY+E V+ +PDF++E + A+ +Y RDRRFGG
Sbjct: 186 DVDMFLRPSGEQRTSNFLLWQSAYAEMVYRDILFPDFTKEDLYDAVLEYAKRDRRFGGTK 245
>gi|89898638|ref|YP_515748.1| undecaprenyl pyrophosphate synthetase [Chlamydophila felis Fe/C-56]
gi|89332010|dbj|BAE81603.1| undecaprenyl pyrophosphate synthetase [Chlamydophila felis Fe/C-56]
Length = 250
Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats.
Identities = 95/236 (40%), Positives = 132/236 (55%), Gaps = 4/236 (1%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCA----GHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ S P H+ IIMDGN RW + R GH G + +I+ +A +GI+ LT+FA
Sbjct: 15 TQSLPRHVAIIMDGNRRWYQRHQILRSIQHSSGHHYGAKALPDIIESAFSLGIEVLTLFA 74
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS N+ R E+ EL L S L + L +N I++R IGN L+L + + +
Sbjct: 75 FSTENFLRSTEEVEELFSLFHSQLDEQLPHLIENKIRLRCIGNLLALPKHLQQQIAKITS 134
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
QT+ +G L +A NY +DE+ RA K + QD+ + V LI YLDTS++PDP
Sbjct: 135 QTKEYSGRELVLAINYGGKDELVRAFKKLHQDLSDQKISLDSVSEGLIRLYLDTSEIPDP 194
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DL+IRTGGE R+S+FLLWQ+AY+E WPDF + A+ Y R RR G
Sbjct: 195 DLLIRTGGEMRVSNFLLWQIAYTELYVTDVLWPDFKPDHLLDAIKAYQHRARRGGR 250
>gi|302558679|ref|ZP_07311021.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces
griseoflavus Tu4000]
gi|302476297|gb|EFL39390.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces
griseoflavus Tu4000]
Length = 257
Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats.
Identities = 85/238 (35%), Positives = 127/238 (53%), Gaps = 7/238 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ ++ P HIG+IMDGN RWA A G GHR G + E + +E ++ +T++ S
Sbjct: 23 LDTAQVPKHIGVIMDGNRRWAKAAGSSTVHGHRVGADKIGEFLGWCSETDVEVVTLWLLS 82
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
+N+ RP E+ L+ +I+ ++ +V +G R L + LKEAE T
Sbjct: 83 TDNFDRPKEELVPLLGIIEDVVRSL---AADGRWRVHHVGTRDLLPAGMQTTLKEAEQST 139
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGS----VCSHDVDSSLIAKYLDTSDVP 180
G+ + +A Y R EI+ A++++ D + VD +I ++L T P
Sbjct: 140 ADVGGIVVNVAIGYGGRQEIADAVRSMLLDAHDRGTPMDELAEAVDIDMIGRHLYTRAQP 199
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DPDL+IRT GE+RLS F+LWQ A+SE+ F +WP F + F AL Y R RRFGG
Sbjct: 200 DPDLVIRTSGEQRLSGFMLWQTAHSEYYFCDVFWPAFRKVDFLRALRDYAARHRRFGG 257
>gi|62389881|ref|YP_225283.1| undecaprenyl pyrophosphate synthase [Corynebacterium glutamicum
ATCC 13032]
gi|145295141|ref|YP_001137962.1| undecaprenyl pyrophosphate synthase [Corynebacterium glutamicum R]
gi|41325217|emb|CAF19697.1| PUTATIVE UNDECAPRENYL PYROPHOSPHATE SYNTHETASE [Corynebacterium
glutamicum ATCC 13032]
gi|140845061|dbj|BAF54060.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 256
Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats.
Identities = 83/243 (34%), Positives = 126/243 (51%), Gaps = 7/243 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGL-PRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
++ + + P H+ I+ DGN RWA G GHR G + E+V +V + +T
Sbjct: 16 LLRELDGAKQPGHVAIMCDGNRRWAREAGFTDVSHGHRVGAKKIGEMVRWCDDVDVNLVT 75
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++ S+ N R E+ L +I + + N +VR++G+ L D + C L++
Sbjct: 76 VYLLSMENLGRSSEELQLLFDIIADVADELAR--PETNCRVRLVGHLDLLPDPVACRLRK 133
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDS----SLIAKYLD 175
AE+ T NTG+ + +A Y R EI A++ + + + ++ I+ +L
Sbjct: 134 AEEATVNNTGIAVNMAVGYGGRQEIVDAVQKLLTIGKDEGLSVDELIESVKVDAISTHLY 193
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
TS PDPDL+IRT GE+RLS F+LWQ AYSE F YWP F R F A+ Y+ R RR
Sbjct: 194 TSGQPDPDLVIRTSGEQRLSGFMLWQSAYSEIWFTDTYWPAFRRIDFLRAIRDYSQRSRR 253
Query: 236 FGG 238
FG
Sbjct: 254 FGK 256
>gi|297626095|ref|YP_003687858.1| Undecaprenyl diphosphate synthase
(di-trans,poly-cis-decaprenylcistransferase)
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
gi|296921860|emb|CBL56420.1| Undecaprenyl diphosphate synthase
(di-trans,poly-cis-decaprenylcistransferase)
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
Length = 266
Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats.
Identities = 92/242 (38%), Positives = 140/242 (57%), Gaps = 2/242 (0%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ + + P H+ ++MDGNGRWA RGLPR GH G +++A A E+GI L+++AF
Sbjct: 24 ALPAKALPRHVAVVMDGNGRWATQRGLPRTKGHEAGESALFDVIAGAIEMGIDCLSVYAF 83
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ +S + + L ++VR G R L ++ L++AE++
Sbjct: 84 STENWKRSPEEVRFLMGFSRSVIHRRLDELDAWGVRVRWAGRRPRLWRSVITELEQAEER 143
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
TR N L + NY R EI A + I +G + + +YLD D+PD D
Sbjct: 144 TRHNDTLQMQFCVNYGGRAEIVDAARKIAAAAAAGRLDPAHLTEKSFHRYLDEPDMPDVD 203
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL--SK 241
L +R+ GE+RLS+FL+WQ AY+E VF + WPD+ R + A+N+Y RDRR+GG S
Sbjct: 204 LFVRSSGEQRLSNFLIWQSAYAELVFSQKLWPDWDRRDLWDAVNRYVHRDRRYGGTDSST 263
Query: 242 KG 243
+G
Sbjct: 264 QG 265
>gi|330469588|ref|YP_004407331.1| undecaprenyl diphosphate synthase [Verrucosispora maris AB-18-032]
gi|328812559|gb|AEB46731.1| undecaprenyl diphosphate synthase [Verrucosispora maris AB-18-032]
Length = 270
Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats.
Identities = 88/235 (37%), Positives = 129/235 (54%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ + P H+ ++MDGNGRWA RGLPR GH G + V A E+GI L+ +AF
Sbjct: 26 ALPPGAVPKHVAVVMDGNGRWAKERGLPRTKGHEAGEFSLFDTVEGAIEMGIPYLSAYAF 85
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRR E+ L+ + +++ L ++V G L ++ L+ AE+
Sbjct: 86 STENWRRSPDEVRFLMGFNRDVIRRRRDQLIDLGVRVVWSGRAGRLWKSVISELQTAEEM 145
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
+R N+ L L NY + EI+ A I +D +G + V +A+YL +VP+ D
Sbjct: 146 SRGNSTLTLQFCVNYGGQAEIADAAAAIARDAAAGKLDPAKVTEKTVARYLYHPEVPEVD 205
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R GE+R S+F+LWQ AY+E VF+ WPDF R ++A Y RDRRFGG
Sbjct: 206 LFLRPSGEQRTSNFMLWQSAYAELVFLDTLWPDFDRRHLWYACELYAQRDRRFGG 260
>gi|328950710|ref|YP_004368045.1| Undecaprenyl pyrophosphate synthase [Marinithermus hydrothermalis
DSM 14884]
gi|328451034|gb|AEB11935.1| Undecaprenyl pyrophosphate synthase [Marinithermus hydrothermalis
DSM 14884]
Length = 228
Score = 258 bits (659), Expect = 6e-67, Method: Composition-based stats.
Identities = 98/234 (41%), Positives = 136/234 (58%), Gaps = 7/234 (2%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P H+ IIMDGNGRWA ARGLPR GH G E V AA + ++ LT++AFS NW
Sbjct: 2 SVPRHVAIIMDGNGRWAQARGLPRFRGHLAGREAIRAAVRAAVKHQVEWLTLYAFSTENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RRP E+ L +L ++ L + +L + +++ +IG R L +L ++ AE+ +R T
Sbjct: 62 RRPQEEVDALFELFETVLWEETPNLVREGVRIHIIGEREGLPPTLLEAIRYAEEASREGT 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
L+L A NY R EI A++ + + + + + L ++PDPDLIIRT
Sbjct: 122 RLHLVGALNYGGRQEILSAVRRMVAEGL-------EPTEENLRRALYLPEMPDPDLIIRT 174
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE RLS+FLLWQ AYSE WPDFS E F A+ Y R+RRFGG+ ++
Sbjct: 175 SGELRLSNFLLWQSAYSEIWVTDTLWPDFSEEHFGQAVQAYQERERRFGGVPQR 228
>gi|171742449|ref|ZP_02918256.1| hypothetical protein BIFDEN_01561 [Bifidobacterium dentium ATCC
27678]
gi|306822359|ref|ZP_07455738.1| di-trans,poly-cis-decaprenylcistransferase [Bifidobacterium dentium
ATCC 27679]
gi|309802150|ref|ZP_07696259.1| di-trans,poly-cis-decaprenylcistransferase [Bifidobacterium dentium
JCVIHMP022]
gi|171278063|gb|EDT45724.1| hypothetical protein BIFDEN_01561 [Bifidobacterium dentium ATCC
27678]
gi|304554357|gb|EFM42265.1| di-trans,poly-cis-decaprenylcistransferase [Bifidobacterium dentium
ATCC 27679]
gi|308221230|gb|EFO77533.1| di-trans,poly-cis-decaprenylcistransferase [Bifidobacterium dentium
JCVIHMP022]
Length = 263
Score = 258 bits (659), Expect = 6e-67, Method: Composition-based stats.
Identities = 86/241 (35%), Positives = 140/241 (58%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + P H+G+IMDGNGRWA RGL R GH+ V + +A A E G++ L++
Sbjct: 23 IIPDFPKNKVPRHVGVIMDGNGRWAQQRGLIRTDGHQAAEPVVFDTIAGAIEAGVRYLSL 82
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW+R E+ L+ + + + + + ++VR G R L ++ L+ A
Sbjct: 83 YTFSTENWKRSPQEVRFLMGFSRDIIHRRVAQMDEWGVRVRWSGRRPKLWKSVIDELEVA 142
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+++T+ N +++ NY R EI+ A I +++ G + V +IA +L D+P
Sbjct: 143 QERTKNNKTIDVVFCLNYGGRAEIADACAAIAREVRDGRISGDRVTEKMIADHLYNPDIP 202
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
D DL+IRT GE+R S+FL W+ AY+E F+PE +PD RE+ + +++ Y RDRRFGG+
Sbjct: 203 DCDLVIRTSGEQRTSNFLPWEAAYAELDFVPELFPDCGREVLWRSISHYVDRDRRFGGVK 262
Query: 241 K 241
K
Sbjct: 263 K 263
>gi|91088189|ref|XP_972722.1| PREDICTED: similar to dehydrodolichyl diphosphate synthase
[Tribolium castaneum]
gi|270012136|gb|EFA08584.1| hypothetical protein TcasGA2_TC006239 [Tribolium castaneum]
Length = 285
Score = 258 bits (659), Expect = 6e-67, Method: Composition-based stats.
Identities = 83/241 (34%), Positives = 129/241 (53%), Gaps = 6/241 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P HI IMDGN R+A + + GH KG + E + E+G+K +T++AFS
Sbjct: 20 IKCGPIPRHIAFIMDGNRRYATKTKVEKAEGHIKGFDKLAETLQWCLELGVKEVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R E+ L+KL ++ + + +R+IGN L ++ ++ EAE
Sbjct: 80 IENFKRSREEVDTLMKLATEKFRQLLDEKEKIMSEGVCIRIIGNLGLLSPELRKLVAEAE 139
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T+ N L +AF+Y+SRDEI +++I + ++ ++ D+D LI+ L TS PD
Sbjct: 140 LMTKDNNKAFLNVAFSYTSRDEIFNTVQSIVKGVQDEALDVEDIDEDLISGALYTSCSPD 199
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDLI+RT GE R SDFLLWQ++ S F WP+F + Y R + L +
Sbjct: 200 PDLIVRTSGEVRFSDFLLWQISNSFISFTKVLWPEFCIWHLLACIFYYQ---RSYNDLQQ 256
Query: 242 K 242
K
Sbjct: 257 K 257
>gi|291228763|ref|XP_002734350.1| PREDICTED: CG10778-like [Saccoglossus kowalevskii]
Length = 326
Score = 258 bits (659), Expect = 6e-67, Method: Composition-based stats.
Identities = 85/230 (36%), Positives = 127/230 (55%), Gaps = 3/230 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P H+ IMDGN R+A L R GH KG E E + ++GI +T++AFS
Sbjct: 23 LKCGAIPKHVAFIMDGNRRFARKSSLERQEGHIKGFEKLTETLEWCLDLGITEVTVYAFS 82
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R E+S L++L + +K ++K + +RV+G+ L +D+ + EA
Sbjct: 83 IENFKRSKEEVSGLMELARQKFEKLLEEKKMIQKYGVCIRVLGDIDLLPNDVKRAVAEAV 142
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ ++ N L + F Y+SR EIS AIK + +E G + DV L+ K L T P+
Sbjct: 143 NFSKHNNRAILNVCFAYTSRHEISNAIKEMALGVEEGFLRPSDVSEELLEKCLYTGKSPN 202
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
P+L+IRT GE RLSDFLLWQ +S F+ WP+FS F A+ Y
Sbjct: 203 PELLIRTSGEVRLSDFLLWQTTFSVLSFVKVLWPEFSVWHLFAAVLHYQR 252
>gi|283456465|ref|YP_003361029.1| undecaprenyl pyrophosphate synthetase [Bifidobacterium dentium Bd1]
gi|283103099|gb|ADB10205.1| UppS Undecaprenyl pyrophosphate synthetase [Bifidobacterium dentium
Bd1]
Length = 258
Score = 257 bits (658), Expect = 6e-67, Method: Composition-based stats.
Identities = 86/241 (35%), Positives = 140/241 (58%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + P H+G+IMDGNGRWA RGL R GH+ V + +A A E G++ L++
Sbjct: 18 IIPDFPKNKVPRHVGVIMDGNGRWAQQRGLIRTDGHQAAEPVVFDTIAGAIEAGVRYLSL 77
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW+R E+ L+ + + + + + ++VR G R L ++ L+ A
Sbjct: 78 YTFSTENWKRSPQEVRFLMGFSRDIIHRRVAQMDEWGVRVRWSGRRPKLWKSVIDELEVA 137
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+++T+ N +++ NY R EI+ A I +++ G + V +IA +L D+P
Sbjct: 138 QERTKNNKTIDVVFCLNYGGRAEIADACAAIAREVRDGRISGDRVTEKMIADHLYNPDIP 197
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
D DL+IRT GE+R S+FL W+ AY+E F+PE +PD RE+ + +++ Y RDRRFGG+
Sbjct: 198 DCDLVIRTSGEQRTSNFLPWEAAYAELDFVPELFPDCGREVLWRSISHYVDRDRRFGGVK 257
Query: 241 K 241
K
Sbjct: 258 K 258
>gi|118496844|ref|YP_897894.1| undecaprenyl pyrophosphate synthetase [Francisella tularensis
subsp. novicida U112]
gi|194324472|ref|ZP_03058244.1| undecaprenyl-diphosphate synthase [Francisella tularensis subsp.
novicida FTE]
gi|208780539|ref|ZP_03247878.1| undecaprenyl diphosphate synthase [Francisella novicida FTG]
gi|118422750|gb|ABK89140.1| undecaprenyl pyrophosphate synthetase [Francisella novicida U112]
gi|194321307|gb|EDX18793.1| undecaprenyl-diphosphate synthase [Francisella tularensis subsp.
novicida FTE]
gi|208743514|gb|EDZ89819.1| undecaprenyl diphosphate synthase [Francisella novicida FTG]
Length = 257
Score = 257 bits (658), Expect = 6e-67, Method: Composition-based stats.
Identities = 95/236 (40%), Positives = 141/236 (59%), Gaps = 1/236 (0%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ H+ IIMDGNGRWA +R PR GHR + + + E I+ LT+FAF +
Sbjct: 22 KENILRHLAIIMDGNGRWAKSRLKPRIFGHRNSVSSVDATIEYCVENNIEMLTLFAFGRD 81
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP E+S+L+ L LK L NNI V V+G+R L D ++ +++ +E T+
Sbjct: 82 NWLRPAQEVSDLMDLFYKTLKDKTPKLHDNNIVVTVVGDRSRLSDKLIGMIEYSESLTKS 141
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTGL L +A +Y+ R +I A + I ++++ G + D+D ++ AKYL ++P DL+I
Sbjct: 142 NTGLKLRLAVDYAGRWDIVEATRAIAREVDIGKLSVDDIDQNIFAKYLVGGNMP-VDLLI 200
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE RLSDF+LWQ+AY+E F WPDFS++ A+ + R RRFG ++
Sbjct: 201 RTSGEVRLSDFMLWQLAYAEMYFTDIMWPDFSKQELTRAVEYFYSRQRRFGKSGEQ 256
>gi|297192366|ref|ZP_06909764.1| undecaprenyl pyrophosphate synthetase 1 [Streptomyces
pristinaespiralis ATCC 25486]
gi|197723032|gb|EDY66940.1| undecaprenyl pyrophosphate synthetase 1 [Streptomyces
pristinaespiralis ATCC 25486]
Length = 253
Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats.
Identities = 82/240 (34%), Positives = 128/240 (53%), Gaps = 7/240 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ + P HIG+I+DGN RWA A G GH+ G + +E++ AE ++ +T++
Sbjct: 17 GRLDHAQVPKHIGVILDGNRRWAKASGGTAAQGHQAGADKISELLGWCAETDVEVVTLWL 76
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
S +N+ RP E+ L+ +I++ ++ +V +G L D VLKEAE
Sbjct: 77 LSTDNFDRPEEELKPLLGIIENTVRNL---AADGRWRVHHVGTLDLLPDHTQRVLKEAEQ 133
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSD 178
T G+ + +A Y R EI+ A++++ + + VD I+++L T
Sbjct: 134 ATADVKGILVNVAVGYGGRQEIADAVRSLLLEHAEKGTSFEELAEIVDVEHISEHLYTRG 193
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PDPDL+IRT GE+RLS F+LWQ A+SE+ F +WP F + F AL Y R RR+G
Sbjct: 194 QPDPDLVIRTSGEQRLSGFMLWQSAHSEYYFCEVFWPAFRKVDFLRALRDYAARHRRYGA 253
>gi|257077032|ref|ZP_05571393.1| undecaprenyl pyrophosphate synthetase [Ferroplasma acidarmanus
fer1]
Length = 258
Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats.
Identities = 88/240 (36%), Positives = 130/240 (54%), Gaps = 2/240 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + + P H+GII DGN R+A GL GH +G + E++ A EVGI+ +T+
Sbjct: 19 LMEEIRKADVPLHLGIITDGNRRYAREAGLTPNEGHVRGKDKLEEVLDWAMEVGIRIVTV 78
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFY--SLKKNNIKVRVIGNRLSLDDDILCVLK 118
+ FS N++R E++ L LI L+ + KN I+VR+IG+ L + ++ +
Sbjct: 79 YGFSSENFKRDPEEVNFLFDLINDSLRGLLKDDRIFKNQIRVRIIGDFKGLPEYLVNTIH 138
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
+ E T IA Y R EI A+KNI D+ S + D++ L YL +
Sbjct: 139 DVEKITAGFKKFKFNIAIGYGGRQEIIDAVKNIAADVVSKKLKIEDINEKLFRNYLYDNT 198
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+ DPDLI+RT GE+R+S+FLLWQ AYSE F WPD + F A+ Y R RR+G
Sbjct: 199 LTDPDLILRTSGEERISNFLLWQSAYSELYFSDVNWPDLKKLDFLRAIYSYQSRKRRYGK 258
>gi|156501612|ref|YP_001427677.1| undecaprenyl pyrophosphate synthase [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|290953219|ref|ZP_06557840.1| undecaprenyl pyrophosphate synthase [Francisella tularensis subsp.
holarctica URFT1]
gi|156252215|gb|ABU60721.1| undecaprenyl diphosphate synthase [Francisella tularensis subsp.
holarctica FTNF002-00]
Length = 240
Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats.
Identities = 93/236 (39%), Positives = 141/236 (59%), Gaps = 1/236 (0%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ H+ IIMDGNGRWA +R PR GHR + + + E I+ LT+FAF +
Sbjct: 5 KENILRHLAIIMDGNGRWAKSRLKPRIFGHRNSVSSVDATIEYCVENNIEMLTLFAFGRD 64
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP E+S+L+ L LK L NNI V V+G+R L + ++ +++ +E T+
Sbjct: 65 NWLRPAQEVSDLMDLFYKTLKDKTPKLHDNNIVVTVVGDRSRLSNKLIGMIEYSESLTKS 124
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTGL L +A +Y+ R +I A + I ++++ G + ++D + AKYL ++P DL+I
Sbjct: 125 NTGLKLRLAVDYAGRWDIVEATRAIAREVDIGKLSVDEIDQNSFAKYLVGGNMP-VDLLI 183
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE RLSDF+LWQ+AY+E F WPDFS++ A+ + R RRFG + ++
Sbjct: 184 RTSGEVRLSDFMLWQLAYAEMYFTDIMWPDFSKQELTRAVEYFYSRQRRFGKIGEQ 239
>gi|288916967|ref|ZP_06411339.1| undecaprenyl diphosphate synthase [Frankia sp. EUN1f]
gi|288351676|gb|EFC85881.1| undecaprenyl diphosphate synthase [Frankia sp. EUN1f]
Length = 265
Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats.
Identities = 95/231 (41%), Positives = 140/231 (60%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+GI+MDGNGRWA RGLPR GH G + + V A E+G++ L+++AFS NW+R
Sbjct: 33 RHVGIVMDGNGRWAKLRGLPRTKGHEAGEDSLFDCVEGAIEMGVRWLSVYAFSTENWKRS 92
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E++ L++ + + + ++VR G R L +++ L+ AE+ TR N L
Sbjct: 93 PDEVAFLMRFTDGVFGRRIDDMHELGVRVRWAGRRPRLWGNVIRRLEAAEELTRDNDRLT 152
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L + NY R E++ A I +D+ G + ++ +A+YLD D+PD DL+IRT GE
Sbjct: 153 LVMCVNYGGRAELADAAAAIARDVRDGRLRPERINEETVARYLDEPDMPDVDLLIRTSGE 212
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+RLS+FLLWQ AY+EF F+P WPDF R + A +Y RDRR+GG+ K
Sbjct: 213 QRLSNFLLWQAAYAEFSFVPTLWPDFDRRDLWLACEEYARRDRRYGGVVAK 263
>gi|282865326|ref|ZP_06274378.1| undecaprenyl diphosphate synthase [Streptomyces sp. ACTE]
gi|282559799|gb|EFB65349.1| undecaprenyl diphosphate synthase [Streptomyces sp. ACTE]
Length = 256
Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats.
Identities = 81/240 (33%), Positives = 132/240 (55%), Gaps = 7/240 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ + P HIG+I+DGN RWA A G GH+ G + +E++ +E ++ +T++
Sbjct: 20 GRLDHAQVPKHIGVILDGNRRWAKASGGSAVQGHQAGADKISELLGWCSETDVEVVTLWL 79
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
S +N+ RP +E+ L+++I++ +++ +V +G L VLKEAE
Sbjct: 80 LSTDNFDRPEAELVPLLRIIENTVRQL---AADGRWRVHHVGTLDLLPAQTQLVLKEAEA 136
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSD 178
T G+ + +A Y R EI+ A++++ + S + V + LI+++L T
Sbjct: 137 ATSDVEGIIVNVAVGYGGRQEIADAVRSLLLEHSSKGTTFEELAEVVSTDLISEHLYTRG 196
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PDPDL+IRT GE+RLS F+LWQ A+SE+ F +WP F + F AL Y R RR+G
Sbjct: 197 QPDPDLVIRTSGEQRLSGFMLWQSAHSEYYFCEVFWPAFRKVDFLRALRDYAARHRRYGA 256
>gi|152965074|ref|YP_001360858.1| undecaprenyl diphosphate synthase [Kineococcus radiotolerans
SRS30216]
gi|151359591|gb|ABS02594.1| undecaprenyl diphosphate synthase [Kineococcus radiotolerans
SRS30216]
Length = 253
Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats.
Identities = 87/242 (35%), Positives = 128/242 (52%), Gaps = 7/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ S+ S + P H+GII+DGN RWA A G P GHR G + E++ A+ GI+ +T+
Sbjct: 15 LERSLDSDALPRHVGIILDGNRRWAKAFGAPSSHGHRAGADKVVEVMEWCADEGIEVVTL 74
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N RP E+ L+++++ + KV +G+ L D L+E
Sbjct: 75 YLLSTDNLSRPAEELEPLIEIVE---DAVARVAARRRWKVHPVGSLELLPDASAARLREL 131
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLDT 176
+ T T + +A Y R EI+ A++++ + ++ D IA +L T
Sbjct: 132 AEATAGITSGVVNVAIGYGGRQEIAAAVRSLLLEHAERGTTLEELAEVLDVEHIAAHLYT 191
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
PDPDL+IRT GE+RLS FLLWQ A+SEF F WPDF + F AL Y R+RRF
Sbjct: 192 KGQPDPDLVIRTSGEQRLSGFLLWQSAHSEFFFTEVLWPDFRKVDFLRALRAYAARERRF 251
Query: 237 GG 238
G
Sbjct: 252 GA 253
>gi|310287055|ref|YP_003938313.1| undecaprenyl diphosphate synthase [Bifidobacterium bifidum S17]
gi|309250991|gb|ADO52739.1| undecaprenyl diphosphate synthase [Bifidobacterium bifidum S17]
Length = 263
Score = 257 bits (658), Expect = 8e-67, Method: Composition-based stats.
Identities = 85/240 (35%), Positives = 138/240 (57%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + P H+G+IMDGNGRWA RGL R GH+ V + +A A E G++ L+++
Sbjct: 24 IPDFPKNKVPRHVGVIMDGNGRWAQQRGLVRTDGHQAAEPVVFDTIAGAIEAGVRYLSLY 83
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
FS NW+R E+ L+ + + + + ++VR G R L ++ L+ A
Sbjct: 84 TFSTENWKRSPQEVRFLMGFSREIIHRRVAQMDDWGVRVRWSGRRPKLWKSVIDELEVAM 143
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T+ N +++ NY R EI+ A I +++ +G + V +IA +L D+PD
Sbjct: 144 ERTKHNKVIDVVFCINYGGRAEIADACAEIAREVAAGRIKGDRVTEKMIADHLYNPDIPD 203
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRT GE+R S+FL W+ AY+E F+PE +PD R++ + +++ Y RDRRFGG+ K
Sbjct: 204 CDLVIRTSGEQRTSNFLPWEAAYAELDFVPELFPDCGRDVLWRSIDHYIHRDRRFGGVKK 263
>gi|218884238|ref|YP_002428620.1| undecaprenyl diphosphate synthase [Desulfurococcus kamchatkensis
1221n]
gi|218765854|gb|ACL11253.1| undecaprenyl diphosphate synthase [Desulfurococcus kamchatkensis
1221n]
Length = 261
Score = 257 bits (658), Expect = 8e-67, Method: Composition-based stats.
Identities = 91/241 (37%), Positives = 128/241 (53%), Gaps = 3/241 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P HIGII DGN RWA GL GH G E E++ E+ I+ +TI
Sbjct: 21 LWMQIRRGPFPRHIGIIPDGNRRWAKRLGLDPSLGHVYGYEKIKEVLKWIWELKIRYVTI 80
Query: 61 FAFSINNWR-RPVSEISELVKLIKSFLK--KGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+ S N R R E L L + L K + + ++V+V G+ + +DI+ +
Sbjct: 81 YTMSTENCRFRDEREREYLFNLARKGLAELKNMREIHERKVRVKVFGSLDLVPEDIVVLA 140
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
E E +T L IA Y R EI A+K I ++ G + D++ L +KYL T+
Sbjct: 141 SELEKETARYDSFQLNIALCYGGRHEIIDAVKAIVKEALEGKIGLEDINEELFSKYLYTN 200
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDPDLIIRT GE+R+S+FLLWQ AYSE F +WP+F + F+ A+ Y R+RRFG
Sbjct: 201 GAPDPDLIIRTSGEERISNFLLWQSAYSELYFCDVFWPEFRKIDFWRAIRSYQRRERRFG 260
Query: 238 G 238
Sbjct: 261 R 261
>gi|197105239|ref|YP_002130616.1| undecaprenyl diphosphate synthase [Phenylobacterium zucineum HLK1]
gi|196478659|gb|ACG78187.1| undecaprenyl diphosphate synthase [Phenylobacterium zucineum HLK1]
Length = 258
Score = 257 bits (658), Expect = 8e-67, Method: Composition-based stats.
Identities = 98/229 (42%), Positives = 144/229 (62%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I+MDGNGRWA RGLPR GHR+G+E V+AAAE I+ LT+F FS NW R
Sbjct: 21 PLHVAIVMDGNGRWAKRRGLPRTLGHREGVEALKRTVSAAAEQDIRWLTVFGFSTENWSR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P +E++EL+ L K + + L++ ++VRVIG R L +++ ++++AE +T N
Sbjct: 81 PAAEVAELMALPKRYFESDIGRLEREGVRVRVIGRRAGLSPELVRIIEDAETRTARNDRF 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IAFNY + +I+ A + +++ +G D+D + A +L T+ P PD+IIR G
Sbjct: 141 FLNIAFNYGGQADIADAARRFAEEVAAGRARPSDLDERVFASFLATAGSPPPDVIIRPSG 200
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+RLS+FLLW+ AY+E VF WPD+ E AL + RDRR+G +
Sbjct: 201 EQRLSNFLLWEAAYAELVFQDVLWPDYGAEHLKAALAAFAARDRRYGAI 249
>gi|242048426|ref|XP_002461959.1| hypothetical protein SORBIDRAFT_02g011210 [Sorghum bicolor]
gi|241925336|gb|EER98480.1| hypothetical protein SORBIDRAFT_02g011210 [Sorghum bicolor]
Length = 307
Score = 257 bits (657), Expect = 8e-67, Method: Composition-based stats.
Identities = 88/242 (36%), Positives = 136/242 (56%), Gaps = 5/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + S P H+ ++MDGN RWA ARGL GH+ G IV + GI+ LT
Sbjct: 61 LQSGLRPESLPRHVAVVMDGNSRWARARGLTPADGHKAGGRNLERIVGLSRAWGIRALTA 120
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
F S N RP +E+ ++ L + + L + I+++VIG+ + + ++A
Sbjct: 121 FVCSRENLSRPKAEVDYMMGLSEWLIGDNIDKLSRQGIRLQVIGDATQMPASLRSAAEQA 180
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS--- 177
++ TR N+ L++ +A YS R ++ +A + + ++ ++G + DVD SL+A L TS
Sbjct: 181 DEATRHNSQLHVMLAICYSGRWDMVQACRELVREAQAGRLSPDDVDESLVAGKLATSAAG 240
Query: 178 --DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
+ PDL++RT GE RLS+FLLWQ AYSEF F + WPDF + AL + RDRR
Sbjct: 241 HGEFSCPDLVVRTSGELRLSNFLLWQSAYSEFFFTDKMWPDFGEAEYLEALRSFQARDRR 300
Query: 236 FG 237
FG
Sbjct: 301 FG 302
>gi|307166541|gb|EFN60608.1| Dehydrodolichyl diphosphate synthase [Camponotus floridanus]
Length = 276
Score = 257 bits (657), Expect = 9e-67, Method: Composition-based stats.
Identities = 83/231 (35%), Positives = 124/231 (53%), Gaps = 7/231 (3%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + + P H+ IMDGN R+A + GH +G + E + ++GI +T++
Sbjct: 5 LKIIKTGHVPKHVAFIMDGNRRYAEKQKKAGIEGHVEGFDKLAETLKWCRDLGIIEVTVY 64
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFSI N+ R E+S L++L + L + I +RVIGN L +D+ + EA
Sbjct: 65 AFSIENFNRSEEEVSGLMELAR-------DKLAEQGICIRVIGNLSLLSEDMRKLFAEAM 117
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T N L IAF+Y+SRDEI+ AIK+I ++ + DV+ +LI++ L T +
Sbjct: 118 IITENNDKATLNIAFSYTSRDEITHAIKDIAVGVKHADILPEDVNENLISQCLYTYKSLN 177
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLR 232
PDL+IRT GE RLSDFLLWQ++ S F WP+F A+ Y
Sbjct: 178 PDLLIRTSGEVRLSDFLLWQISNSCVYFTNVLWPEFGIWNLLSAIFYYQKC 228
>gi|328676313|gb|AEB27183.1| Undecaprenyl pyrophosphate synthetase [Francisella cf. novicida
Fx1]
Length = 240
Score = 257 bits (657), Expect = 9e-67, Method: Composition-based stats.
Identities = 94/236 (39%), Positives = 140/236 (59%), Gaps = 1/236 (0%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ H+ IIMDGNGRWA +R PR GHR + + + E I+ LT+FAF +
Sbjct: 5 KENILRHLAIIMDGNGRWAKSRLKPRIFGHRNSVSSVDATIEYCVENNIEMLTLFAFGRD 64
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP E+S+L+ L LK L NNI V V+G+R L D ++ +++ +E T+
Sbjct: 65 NWLRPAQEVSDLMDLFYKTLKDKTPKLHDNNIVVTVVGDRSRLSDKLIGMIEYSESLTKS 124
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTGL L +A +Y+ R +I A + I ++++ G + ++D + AKYL ++P DL+I
Sbjct: 125 NTGLKLRLAVDYAGRWDIVEATRAIAREVDIGKLSVDEIDQNSFAKYLVGGNMP-VDLLI 183
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE RLSDF+LWQ+AY+E F WPDFS++ A+ + R RRFG ++
Sbjct: 184 RTSGEVRLSDFMLWQLAYAEMYFTDIMWPDFSKQELTRAVEYFYSRQRRFGKSGEQ 239
>gi|260578244|ref|ZP_05846160.1| undecaprenyl diphosphate synthase [Corynebacterium jeikeium ATCC
43734]
gi|258603546|gb|EEW16807.1| undecaprenyl diphosphate synthase [Corynebacterium jeikeium ATCC
43734]
Length = 241
Score = 257 bits (657), Expect = 9e-67, Method: Composition-based stats.
Identities = 86/238 (36%), Positives = 135/238 (56%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ + P HI ++MDGNGRWA RG+ R GHR+G V +V E+G+ L+ +A
Sbjct: 4 SEIPPELRPKHIALVMDGNGRWAEERGMVRTEGHRRGEAVLMSLVEECIELGVDYLSAYA 63
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NWRR E+ L+ + L++ L +++R +G R L ++ L++AE+
Sbjct: 64 FSTENWRRSADEVRFLMGFNRDVLRRQRDYLNSLGVRIRWVGRRPRLWRTVIAELEQAEE 123
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T+ NT + L + NY R EI+ A + I +D+++G + V+ A+YLD D+PD
Sbjct: 124 LTKNNTTMTLGMCVNYGGRAEIADAARWIAEDVKAGKLKPRQVNEKTFARYLDEPDMPDV 183
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL +R GE R S+FL WQ Y+E V+ +PD++ A+ ++ RDRRFGG+
Sbjct: 184 DLFLRPSGEMRTSNFLPWQSTYAEMVYQDVLFPDYTPNHLRAAVLEFAKRDRRFGGVK 241
>gi|238060551|ref|ZP_04605260.1| undecaprenyl-diphosphate synthase [Micromonospora sp. ATCC 39149]
gi|237882362|gb|EEP71190.1| undecaprenyl-diphosphate synthase [Micromonospora sp. ATCC 39149]
Length = 270
Score = 257 bits (657), Expect = 9e-67, Method: Composition-based stats.
Identities = 89/235 (37%), Positives = 133/235 (56%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ + + P H+ I+MDGNGRWA RGLPR GH +G + + A E+GI L+ +AF
Sbjct: 26 ALPADALPKHVAIVMDGNGRWAKERGLPRTKGHEQGEHSLFDTIEGAIELGIPYLSAYAF 85
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRR E+ L+ + +++ L ++V G L ++ L+ AE+
Sbjct: 86 STENWRRSPEEVRFLMGFNRDVIRRRRDQLVDLGVRVVWSGRAGRLWKSVISELQTAEEM 145
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
+R N+ L L NY + EI+ A I +D+ +G + V +AKYL ++P+ D
Sbjct: 146 SRGNSTLTLQFCVNYGGQAEIADAAAAIARDVAAGRLDPGKVTEKTVAKYLYHPEIPEVD 205
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R GE+R+S+FLLWQ AY+E VF+ WPDF R ++A Y RDRRFGG
Sbjct: 206 LFLRPSGEERISNFLLWQTAYAELVFLDTLWPDFDRRHLWYACELYAQRDRRFGG 260
>gi|21618322|gb|AAM67372.1| undecaprenyl pyrophosphate synthetase-like [Arabidopsis thaliana]
Length = 289
Score = 257 bits (657), Expect = 9e-67, Method: Composition-based stats.
Identities = 91/236 (38%), Positives = 129/236 (54%), Gaps = 2/236 (0%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P H+ +IMDGN RWA GL G+ G + E ++GI ++ FAF
Sbjct: 51 ELQRELMPRHVAVIMDGNRRWAKQTGLLTSQGYEAGAKRLLEFADLCFKLGINTVSAFAF 110
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW R E+ L+ L + +LK + I+V VIGN + + +L + E E+
Sbjct: 111 STENWGRHKIEVKCLMYLFQRYLKSKIQFFQSKEIRVSVIGNLAKIPESLLRTVHELEEA 170
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS--DVPD 181
T+ +L +A +YS R +I A KNI + E G + DVD + + L T + P
Sbjct: 171 TKSYKKKHLILAIDYSGRFDILGACKNIVKKSEQGLIREEDVDETFFERELQTRCTEFPS 230
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDL+IRT GE+R+S+F LWQ+AY+EF F P WPDF ++ F AL Y RDRRFG
Sbjct: 231 PDLLIRTSGEQRISNFFLWQLAYTEFFFSPVLWPDFDKQKFIEALVSYQRRDRRFG 286
>gi|146329490|ref|YP_001209627.1| undecaprenyl diphosphate synthase [Dichelobacter nodosus VCS1703A]
gi|146232960|gb|ABQ13938.1| undecaprenyl diphosphate synthase [Dichelobacter nodosus VCS1703A]
Length = 247
Score = 257 bits (657), Expect = 9e-67, Method: Composition-based stats.
Identities = 82/234 (35%), Positives = 134/234 (57%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ +IMDGNGRWA R PR GHR+G + + AAA+ G++ L++FAFS NW
Sbjct: 5 PVPRHVAVIMDGNGRWAKMRQKPRVFGHRQGRNSVEKTIRAAADSGVETLSLFAFSTENW 64
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP EI +++LI+ + +L + +I++R +G R L + L+ AE T+
Sbjct: 65 SRPSMEIGLIMELIQRSIVDEAETLCRQDIRLRFLGRRDKLSASLQENLQWAEALTKNCQ 124
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+ + A +YS I ++++ + + +G++ + +D ++ D+P DL+IR+
Sbjct: 125 RMQVIFAIDYSGHWGILETVRHLAKQVSAGTLSAEQIDEAVFEAARPMPDLPPVDLLIRS 184
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE R+S+F LW++AY+E F WPDF LF A+ Y R+RR+GGL +
Sbjct: 185 SGELRISNFHLWEIAYAELFFTDTLWPDFDESLFREAICAYQARERRYGGLLPQ 238
>gi|159039356|ref|YP_001538609.1| undecaprenyl diphosphate synthase [Salinispora arenicola CNS-205]
gi|157918191|gb|ABV99618.1| undecaprenyl diphosphate synthase [Salinispora arenicola CNS-205]
Length = 260
Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats.
Identities = 88/234 (37%), Positives = 131/234 (55%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + + P H+ ++MDGNGRWA RGLPR GH G + V A E+GI L+ +AFS
Sbjct: 17 LPAEALPRHVAVVMDGNGRWAKERGLPRTKGHEAGEFSLFDAVEGAIELGIPYLSAYAFS 76
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRR E+ L+ + +++ L ++V G L ++ L+ AE+ +
Sbjct: 77 TENWRRSPDEVRFLMGFNRDVIRRRRDQLVDLGVRVVWSGRAGRLWKSVITELQTAEEMS 136
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
R N+ L L NY + EI+ A I +D+ +G + V ++A+YL ++P+ DL
Sbjct: 137 RGNSTLTLQFCVNYGGQAEIADAAAAIARDVAAGRLDPAKVTEKMVARYLYHPEIPEVDL 196
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+R GE+R S+FLLWQ AY+E VF+ WPDF R ++A Y RDRRFGG
Sbjct: 197 FLRPSGEQRTSNFLLWQSAYAELVFLDTLWPDFDRRHLWYACELYAQRDRRFGG 250
>gi|320008821|gb|ADW03671.1| undecaprenyl diphosphate synthase [Streptomyces flavogriseus ATCC
33331]
Length = 253
Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats.
Identities = 81/240 (33%), Positives = 131/240 (54%), Gaps = 7/240 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ P HIG+I+DGN RWA A G GH+ G + +E++ +E ++ +T++
Sbjct: 17 GRLDHDQVPKHIGVILDGNRRWAKASGGSAVQGHQAGADKISELLGWCSETDVEVVTLWL 76
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
S +N+ RP +E+ L+ +I++ +++ +V +G L VLKEAE+
Sbjct: 77 LSTDNFDRPEAELIPLLGIIENTVRQL---ASDGRWRVHHVGTLDLLPSRTQTVLKEAEE 133
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSD 178
T G+ + +A Y R EI+ A++++ D + + V + LI+++L T
Sbjct: 134 ATAGVDGIIVNVAVGYGGRQEIADAVRSLLLDHSARGTTFEELAEVVSTDLISEHLYTRG 193
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PDPDL+IRT GE+RLS F+LWQ A+SE+ F +WP F + F AL Y R RR+G
Sbjct: 194 QPDPDLVIRTSGEQRLSGFMLWQSAHSEYYFCEVFWPAFRKVDFLRALRDYAARHRRYGA 253
>gi|47569101|ref|ZP_00239790.1| undecaprenyl diphosphate synthase [Bacillus cereus G9241]
gi|47554263|gb|EAL12625.1| undecaprenyl diphosphate synthase [Bacillus cereus G9241]
Length = 210
Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats.
Identities = 93/210 (44%), Positives = 138/210 (65%)
Query: 30 LPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKG 89
+PR AGH +G++V +I A+++ +K LT++AFS NW+RP E+ L+KL + FL
Sbjct: 1 MPRIAGHHEGMQVVKKITKFASKLNVKVLTLYAFSTENWKRPKKEVDYLMKLPEEFLGTF 60
Query: 90 FYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIK 149
L + N++VRVIG + L +++A ++T+ NTGL L A NY SRDEI A++
Sbjct: 61 LPELIEENVQVRVIGQQDRLPTHTRRAMEKAMEETKENTGLILNFALNYGSRDEIVSAVQ 120
Query: 150 NIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVF 209
++ +D E G V DV +++ YL TS +PDP+L+IRT GE R+S+F+LWQ+AYSEF F
Sbjct: 121 HMMKDSEEGKVRVEDVSEEMLSSYLMTSSLPDPELLIRTSGELRISNFMLWQIAYSEFWF 180
Query: 210 IPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
YWPDF+ E +A+ + R RRFGG+
Sbjct: 181 TDVYWPDFTEEHLLNAITDFQHRGRRFGGV 210
>gi|254390203|ref|ZP_05005422.1| undecaprenyl pyrophosphate synthetase [Streptomyces clavuligerus
ATCC 27064]
gi|294814762|ref|ZP_06773405.1| Undecaprenyl pyrophosphate synthetase 1 [Streptomyces clavuligerus
ATCC 27064]
gi|326443141|ref|ZP_08217875.1| undecaprenyl pyrophosphate synthase [Streptomyces clavuligerus ATCC
27064]
gi|197703909|gb|EDY49721.1| undecaprenyl pyrophosphate synthetase [Streptomyces clavuligerus
ATCC 27064]
gi|294327361|gb|EFG09004.1| Undecaprenyl pyrophosphate synthetase 1 [Streptomyces clavuligerus
ATCC 27064]
Length = 256
Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats.
Identities = 86/239 (35%), Positives = 127/239 (53%), Gaps = 7/239 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ + P HIG+I+DGN RWA A G AGH+ G E++ AE ++ +T++
Sbjct: 20 GRLDHAQVPKHIGVILDGNRRWAKASGGTPEAGHKAGASKIQELLGWCAETDVEVVTLWL 79
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
S +N RP E+ L+ +I+ ++ +V +G L VLKEAE
Sbjct: 80 LSTDNLDRPEDELVPLLGIIEDAVR---ALAADGRWRVHHVGTLDLLPSRTQLVLKEAEQ 136
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSD 178
T +TG+ + +A Y R EI+ A++++ D + VD LI+K+L T
Sbjct: 137 DTLDHTGILVNVAVGYGGRQEIADAVRSLLLDHAERGTSVEELAETVDVDLISKHLYTRG 196
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDPDL+IRT GE+RLS F+LWQ A+SE+ F +WP F + F AL Y R RR+G
Sbjct: 197 QPDPDLVIRTSGEQRLSGFMLWQSAHSEYYFCEVFWPAFRKVDFLRALRDYAARHRRYG 255
>gi|297560286|ref|YP_003679260.1| undecaprenyl diphosphate synthase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296844734|gb|ADH66754.1| undecaprenyl diphosphate synthase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 564
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 88/233 (37%), Positives = 124/233 (53%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
++ P+H+ +IMDGN RWA A GL GH G E +V AA ++GIK +T FAFS
Sbjct: 326 PAAVPEHVAVIMDGNRRWALALGLAAVEGHMAGEEAMYRLVDAAGDLGIKYVTTFAFSTE 385
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW R E+S L K+ + L +++R G R ++ + L+ AE+ T
Sbjct: 386 NWSRSPEEVSSLFKVFARRVTGVTGRLHARGVRMRWYGRRTRIEAALRERLEWAEELTSG 445
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N+G+ +Y R E+ A+K+ + SG + + S +A YL +PD DL+I
Sbjct: 446 NSGVTFTFCLDYGGRQEMVDAVKHAAAEAFSGRLDPTRMAESDLAGYLYDPTLPDVDLLI 505
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RT GE+R S+FL W AY+E VF WPDF R A+N Y R R FGG
Sbjct: 506 RTAGEQRTSNFLPWHTAYAEIVFDDALWPDFDRSHLVRAVNAYAERRRSFGGT 558
>gi|224282595|ref|ZP_03645917.1| undecaprenyl pyrophosphate synthetase [Bifidobacterium bifidum
NCIMB 41171]
gi|311063923|ref|YP_003970648.1| undecaprenyl pyrophosphate synthetase [Bifidobacterium bifidum
PRL2010]
gi|313139753|ref|ZP_07801946.1| undecaprenyl pyrophosphate synthetase [Bifidobacterium bifidum
NCIMB 41171]
gi|310866242|gb|ADP35611.1| UppS Undecaprenyl pyrophosphate synthetase [Bifidobacterium bifidum
PRL2010]
gi|313132263|gb|EFR49880.1| undecaprenyl pyrophosphate synthetase [Bifidobacterium bifidum
NCIMB 41171]
Length = 263
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 85/240 (35%), Positives = 138/240 (57%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + P H+G+IMDGNGRWA RGL R GH+ V + +A A E G++ L+++
Sbjct: 24 IPDFPKNKVPRHVGVIMDGNGRWAQQRGLVRTDGHQAAEPVVFDTIAGAIEAGVRYLSLY 83
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
FS NW+R E+ L+ + + + + ++VR G R L ++ L+ A
Sbjct: 84 TFSTENWKRSPQEVRFLMGFSREIIHRRVAQMDDWGVRVRWSGRRPKLWKSVIDELEVAM 143
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++T+ N +++ NY R EI+ A I +++ +G + V +IA +L D+PD
Sbjct: 144 ERTKHNKVIDVVFCINYGGRAEIADACAEIAREVAAGRIKGDRVTEKMIADHLYNPDIPD 203
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRT GE+R S+FL W+ AY+E F+PE +PD R++ + +++ Y RDRRFGG+ K
Sbjct: 204 CDLVIRTSGEQRTSNFLPWEAAYAELDFVPELFPDCGRDVLWRSIDHYIHRDRRFGGVKK 263
>gi|148698094|gb|EDL30041.1| dehydrodolichyl diphosphate synthase, isoform CRA_b [Mus musculus]
Length = 355
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 83/242 (34%), Positives = 129/242 (53%), Gaps = 6/242 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IMDGN R+A + R GH +G E + +GI +T++AFS
Sbjct: 41 IKAGPVPKHIAFIMDGNRRYAKKCQVERQEGHTQGFNKLAETLRWCLNLGILEVTVYAFS 100
Query: 65 INNWRRPVSEISELVKLIKS---FLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R SE+ L+ L + L + L+K+ + +RV+G+ L D+ + A
Sbjct: 101 IENFKRSKSEVDGLLDLARQKFSCLMEEQEKLQKHGVCIRVLGDLHLLPLDLQEKIAHAI 160
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T+ L + F Y+SR EI+ A++ + +E G + DV SL+ K L ++ P
Sbjct: 161 QATKNYNKCFLNVCFAYTSRHEIANAVREMAWGVEQGLLEPSDVSESLLDKCLYSNHSPH 220
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PD++IRT GE RLSDFLLWQ ++S VF P WP+++ A+ Q+ R G L +
Sbjct: 221 PDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLCEAILQFQ---RNHGALQQ 277
Query: 242 KG 243
K
Sbjct: 278 KA 279
>gi|117929088|ref|YP_873639.1| undecaprenyl pyrophosphate synthetase [Acidothermus cellulolyticus
11B]
gi|117649551|gb|ABK53653.1| Undecaprenyl pyrophosphate synthetase [Acidothermus cellulolyticus
11B]
Length = 279
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 88/242 (36%), Positives = 129/242 (53%), Gaps = 7/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ A++ P H+G+I+DGN RW A GL GHR+G E E + A++ I+ +T+
Sbjct: 41 LAATLPPDRIPRHVGVILDGNRRWGRAMGLGASGGHRRGAEKIEEFLGWCADLRIEVVTL 100
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N RP E+ L+++I+ + + S ++ +G L D LKEA
Sbjct: 101 WLLSTDNLARPADELVPLLRIIEETVAELAAS---RRWRLHPVGALDLLPDQTARTLKEA 157
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLDT 176
E T+ GL + +A Y R EI+ A++ + + D+ D IA++L T
Sbjct: 158 EHATQDVDGLLVNVAVGYGGRREIADAVRALLHEHAIRGTSIEDLANVLDVEHIARHLYT 217
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
PDPDL+IRT GE+RLS FLLWQ A+SE F WPDF R F A+ Y R+RRF
Sbjct: 218 KGQPDPDLVIRTSGEQRLSGFLLWQSAHSELFFCEALWPDFRRVDFLRAVRAYAQRERRF 277
Query: 237 GG 238
G
Sbjct: 278 GA 279
>gi|291299551|ref|YP_003510829.1| undecaprenyl diphosphate synthase [Stackebrandtia nassauensis DSM
44728]
gi|290568771|gb|ADD41736.1| undecaprenyl diphosphate synthase [Stackebrandtia nassauensis DSM
44728]
Length = 262
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 88/235 (37%), Positives = 124/235 (52%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ P H+ + MDGNGRWA RGLPR GH G + + A E+GI L+ +AF
Sbjct: 20 AIPKDLIPKHVAVTMDGNGRWAKQRGLPRTDGHAAGEASLFDTIEGAIELGISTLSAYAF 79
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRR E+ L+ + + + L +++R G R L ++ L+ A++
Sbjct: 80 STENWRRSPDEVRWLMGFNRDVIHRRRDELNAMGVRIRWAGRRPKLWRSVIKELEIAQEM 139
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
++ N + L NY R EIS A I +D +G + V +AKYL D+PD D
Sbjct: 140 SKHNDKITLQFCVNYGGRAEISDAAAAIARDAAAGKLNPDKVSEKTVAKYLYNPDLPDVD 199
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R GE+R S+FL WQ Y+E VF WPDF R +HA Y RDRR+GG
Sbjct: 200 LFLRPSGEQRTSNFLPWQATYAELVFQDVLWPDFDRRHLWHACEVYASRDRRYGG 254
>gi|254372208|ref|ZP_04987700.1| undecaprenyl pyrophosphate synthetase [Francisella tularensis
subsp. novicida GA99-3549]
gi|151569938|gb|EDN35592.1| undecaprenyl pyrophosphate synthetase [Francisella novicida
GA99-3549]
Length = 257
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 94/236 (39%), Positives = 140/236 (59%), Gaps = 1/236 (0%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ H+ IIMDGNGRWA +R PR GHR + + + E I+ LT+FAF +
Sbjct: 22 KENILRHLAIIMDGNGRWAKSRLKPRIFGHRNSVSSVDATIEYCVENNIEMLTLFAFGRD 81
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP E+S+L+ L LK L NNI V V+G+R L D ++ +++ +E T+
Sbjct: 82 NWLRPAQEVSDLMDLFYKTLKDKTPRLHDNNIVVTVVGDRSRLSDKLIDMIEYSESLTKS 141
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTGL L +A +Y+ R +I A + I ++++ G + ++D + AKYL ++P DL+I
Sbjct: 142 NTGLKLRLAVDYAGRWDIVEATRAIAREVDIGKLSVDEIDQNSFAKYLVGGNMP-VDLLI 200
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE RLSDF+LWQ+AY+E F WPDFS++ A+ + R RRFG ++
Sbjct: 201 RTSGEVRLSDFMLWQLAYAEMYFTDIMWPDFSKQELTRAVEYFYSRQRRFGKSGEQ 256
>gi|297825231|ref|XP_002880498.1| cis-prenyltransferase [Arabidopsis lyrata subsp. lyrata]
gi|297326337|gb|EFH56757.1| cis-prenyltransferase [Arabidopsis lyrata subsp. lyrata]
Length = 292
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 92/237 (38%), Positives = 134/237 (56%), Gaps = 2/237 (0%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ P H+ I+DGN RWA GL GH G + EI E+GI ++ F
Sbjct: 53 EELQRELMPRHVAFILDGNRRWAKRAGLTTQQGHEAGAKRLVEIAELCFELGIHTVSAFV 112
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW R E+ L+ LI+ + K ++ I+V VIGN+ ++ + +L L E E+
Sbjct: 113 FSTENWGRDKIEVDNLMSLIQHYRKSDIQFFHRSEIRVSVIGNQTNISEHLLQKLHEIEE 172
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT--SDVP 180
T+ +L +A +YS R +I A K++ + E G + DVD +LI + L T SD P
Sbjct: 173 ATKGYKNKHLIVAIDYSGRFDIMHACKSLVKKSEKGLIREEDVDEALIERELLTNCSDFP 232
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDL+IRT GE+R+S+F LWQ+AY+E F P +WPDF ++ AL+ Y R+RRFG
Sbjct: 233 SPDLMIRTSGEQRISNFFLWQLAYTELFFSPVFWPDFDKDKLLEALDSYQRRERRFG 289
>gi|255089362|ref|XP_002506603.1| predicted protein [Micromonas sp. RCC299]
gi|226521875|gb|ACO67861.1| predicted protein [Micromonas sp. RCC299]
Length = 355
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 84/237 (35%), Positives = 133/237 (56%), Gaps = 4/237 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P H+ +IMDGN RWA+ RG+ GH G++ IV + LT++AFS
Sbjct: 116 IERAHLPRHVAVIMDGNARWASERGVAVATGHEAGVDTLRTIVRCCGAWDVAALTVYAFS 175
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRR SE+ L+ L++ L SL ++V V+G+ +D ++ + +A D T
Sbjct: 176 HENWRRSRSEVEHLMSLLERTLVAELPSLVDEGVRVTVMGDMGMIDANLRAAINDAVDAT 235
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP---- 180
R NT L L +A +Y +R +I A + + + +G + D+ ++ ++L + +P
Sbjct: 236 RRNTKLRLNVALSYGARQDIVNAARLLATEAAAGLIDPEDITEDVLGEHLASRTLPAEVR 295
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+PDL++R GGE+R+S+FLLW++AY+E F WPDF F AL Y R RRFG
Sbjct: 296 EPDLLVRPGGERRVSNFLLWELAYTELYFADRMWPDFGERDFREALAWYAGRQRRFG 352
>gi|295100641|emb|CBK98186.1| Undecaprenyl pyrophosphate synthetase [Faecalibacterium prausnitzii
L2-6]
Length = 237
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 93/226 (41%), Positives = 142/226 (62%), Gaps = 1/226 (0%)
Query: 14 IGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVS 73
IGIIMDGNGRWA +RGLPR AGH+KG +VF +I E+G++++ +AFS NW+RP
Sbjct: 13 IGIIMDGNGRWAKSRGLPRTAGHKKGAQVFQDIADYCDELGVESVYFYAFSTENWKRPAE 72
Query: 74 EISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLF 133
E+ +++L +L KGF + N+++ +G+R L+ + ++ + E + TGL +
Sbjct: 73 EVGAIMRLFGEYLIKGFD-YENRNVRICFMGDRTVLEPKLQELMNKLERDSACKTGLTIN 131
Query: 134 IAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKR 193
IA NY R EI RA +++ +G + D+ ++ + T+ DPD I+R GEKR
Sbjct: 132 IAINYGGRPEIVRAAQSLAAKAAAGGLKPEDITEEALSAQMYTAGQKDPDFILRPSGEKR 191
Query: 194 LSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
LS+F+LWQ AYSE V + WPDF+R+ A+ ++N R RRFGG+
Sbjct: 192 LSNFMLWQAAYSELVEMDVLWPDFTRDDLDAAIMEFNRRSRRFGGI 237
>gi|126540560|emb|CAM46105.1| dehydrodolichyl diphosphate synthase [Mus musculus]
gi|126541192|emb|CAM46082.1| dehydrodolichyl diphosphate synthase [Mus musculus]
Length = 258
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 83/240 (34%), Positives = 128/240 (53%), Gaps = 6/240 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IMDGN R+A + R GH +G E + +GI +T++AFS
Sbjct: 20 IKAGPVPKHIAFIMDGNRRYAKKCQVERQEGHTQGFNKLAETLRWCLNLGILEVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKS---FLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R SE+ L+ L + L + L+K+ + +RV+G+ L D+ + A
Sbjct: 80 IENFKRSKSEVDGLLDLARQKFSCLMEEQEKLQKHGVCIRVLGDLHLLPLDLQEKIAHAI 139
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T+ L + F Y+SR EI+ A++ + +E G + DV SL+ K L ++ P
Sbjct: 140 QATKNYNKCFLNVCFAYTSRHEIANAVREMAWGVEQGLLEPSDVSESLLDKCLYSNHSPH 199
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PD++IRT GE RLSDFLLWQ ++S VF P WP+++ A+ Q+ R G L K
Sbjct: 200 PDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLCEAILQFQ---RNHGALQK 256
>gi|328675399|gb|AEB28074.1| Undecaprenyl pyrophosphate synthetase [Francisella cf. novicida
3523]
Length = 240
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 93/236 (39%), Positives = 141/236 (59%), Gaps = 1/236 (0%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ H+ IIMDGNGRWA +R PR GHR + + + E I+ LT+FAF +
Sbjct: 5 KENILRHLAIIMDGNGRWAKSRLKPRIFGHRNSVSSVDATIEYCVENNIEILTLFAFGRD 64
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP E+++L+ L LK L NNI + V+G+R L D ++ +++ +E T+
Sbjct: 65 NWLRPAQEVADLMDLFYKTLKDKTPKLHDNNIVLTVVGDRSRLSDKLISMIEYSESLTKS 124
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTGL L +A +Y+ R +I A + I +++++G + ++D + AKYL D+P DL+I
Sbjct: 125 NTGLKLRLAVDYAGRWDIVEATRAIAREVDTGKLGVDEIDQNSFAKYLVGGDIP-VDLLI 183
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE RLSDF+LWQ+AY+E F WPDFS++ A+ + R RRFG ++
Sbjct: 184 RTSGEVRLSDFMLWQLAYAEMYFTDIMWPDFSKQELIKAVEYFYSRQRRFGKSGEQ 239
>gi|170289872|ref|YP_001736688.1| undecaprenyl diphosphate synthase [Candidatus Korarchaeum
cryptofilum OPF8]
gi|170173952|gb|ACB07005.1| undecaprenyl diphosphate synthase [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 262
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 84/240 (35%), Positives = 134/240 (55%), Gaps = 4/240 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + P H+ +I+DGN R+A R L G+R G E++ ++GI+++T+
Sbjct: 23 LESVVREGPIPKHVALILDGNRRYAIKRSLSWLEGYRIGANKTKELLEWLLDLGIEHVTL 82
Query: 61 FAFSINNWRRPVSEISELVKLIKSFL---KKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
FAFS N+RRP ++ + K ++ L K+ +LK+ + RV+G + L + I +
Sbjct: 83 FAFSTENFRRPKDQVEAIFKAMEEKLLELKENIGTLKEREVSFRVVGRKDMLPEGIRSIA 142
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+E E T + L +A Y R EI A++ I + ++ G++ ++D +I +L
Sbjct: 143 EEMEASTSGFSK-TLNLAIAYGGRAEIVDAVRKIARKVKEGTLNPDEIDDDVIRMHLYAP 201
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
D+PDPDLIIRT GE+RLS+FLLWQ AYSE F Y P+ + A+ Y R RRFG
Sbjct: 202 DLPDPDLIIRTSGEERLSNFLLWQSAYSELYFCEVYLPELRKVDLLRAIRDYQRRKRRFG 261
>gi|149193962|ref|ZP_01871060.1| putative undecaprenyl diphosphate synthase [Caminibacter
mediatlanticus TB-2]
gi|149135915|gb|EDM24393.1| putative undecaprenyl diphosphate synthase [Caminibacter
mediatlanticus TB-2]
Length = 220
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 99/228 (43%), Positives = 136/228 (59%), Gaps = 10/228 (4%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEV-GIKNLTIFAFSINNWRRP 71
HI IIMDGNGRWA RGL R GH+KG EV EI A I LT++AFS NW+RP
Sbjct: 2 HIAIIMDGNGRWAKKRGLKRTEGHKKGAEVVKEITTYCANNPEIDVLTLYAFSTENWKRP 61
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
EI L+KL+ ++LKK + +N ++ VIG+ D + ++ +++T+ L
Sbjct: 62 KMEIDFLMKLLDNWLKKELPTYIENEVRFEVIGDISKFSDKLKKRIELTKEKTKNFKKLT 121
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+A NY SRDEI+RAIK + Q + ++ S I K LD S D DL+IRT GE
Sbjct: 122 QVLALNYGSRDEITRAIKKLIQK-------NEEITSENIQKNLDIS--RDVDLLIRTSGE 172
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
R+S+FLLWQ+AY+E F WPDF+ E + ++ R+RRFGG+
Sbjct: 173 VRVSNFLLWQIAYAEMFFTKTLWPDFTSEELDKIIKEFKKRERRFGGI 220
>gi|260654953|ref|ZP_05860441.1| di-trans,poly-cis-decaprenylcistransferase [Jonquetella anthropi
E3_33 E1]
gi|260630268|gb|EEX48462.1| di-trans,poly-cis-decaprenylcistransferase [Jonquetella anthropi
E3_33 E1]
Length = 230
Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats.
Identities = 91/235 (38%), Positives = 133/235 (56%), Gaps = 6/235 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M+ S P H+ +IMDGNGRWA R LPR GHR G+ +V + GI+ L+++AFS
Sbjct: 1 MIGSRKPAHVAVIMDGNGRWAKRRHLPRLLGHRAGVGALERLVRSMKGSGIRYLSVYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP E++ L+KL + K+ ++ ++VR G R +L D+ ++ E +T
Sbjct: 61 TENWNRPQQEVNGLMKLFAFYAKRKIRAMAAEGLRVRFAGRRDNLSSDLQSLISWCEAET 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
++L + FNY R EI A++ + + ++L DVPDPDL
Sbjct: 121 AGGAEMDLIVCFNYGGRQEIIDAVQ------AAQKAGCEIRTEEDMKRFLYLPDVPDPDL 174
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE RLS+FLLWQ +YSEF F WPDF+ + F AL+ + RDRR+G +
Sbjct: 175 VIRTSGEMRLSNFLLWQCSYSEFYFTDVLWPDFTPQEFQKALSAFAERDRRYGTV 229
>gi|302521651|ref|ZP_07273993.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. SPB78]
gi|302430546|gb|EFL02362.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. SPB78]
Length = 256
Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats.
Identities = 88/240 (36%), Positives = 130/240 (54%), Gaps = 7/240 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ + P HIG+I+DGN RWA A G GHR G E E + AE ++ +T++
Sbjct: 20 GRLDHAQVPKHIGLILDGNRRWARASGGTTAQGHRAGAEKIEEFLGWCAETDVEVVTLWM 79
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
S +N+ RP SE+ L+ +I+ ++ +V +G L D+ LKEAE
Sbjct: 80 LSTDNFDRPESELVPLLGIIEDSVR---ALAADGRWRVHHVGALDILPDNTRTTLKEAEA 136
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSD 178
T NTG+ + +A Y R EI+ A++++ D + VD LI+++L T
Sbjct: 137 ATSDNTGILVNVAVGYGGRQEIADAVRSLLHDAARKGTSFEELAEAVDIDLISEHLYTRG 196
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PDPDL+IRT GE+RLS F+LWQ A+SE+ F +WP F + F A+ Y R RR+GG
Sbjct: 197 QPDPDLVIRTSGEQRLSGFMLWQSAHSEYYFCEVFWPAFRKVDFLRAMRDYAARHRRYGG 256
>gi|114554917|ref|XP_001143091.1| PREDICTED: dehydrodolichyl diphosphate synthase isoform 1 [Pan
troglodytes]
Length = 275
Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats.
Identities = 81/229 (35%), Positives = 127/229 (55%), Gaps = 3/229 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IMDGN R+A + R GH +G E + +GI +T++AFS
Sbjct: 20 IKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSF---LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R SE+ L+ L + L + L+K+ + +RV+G+ L D+ ++ +A
Sbjct: 80 IENFKRSKSEVDGLMDLARQKFSRLMEEQEKLQKHGVCIRVLGDLHLLPLDLQELIAQAV 139
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T+ L + F Y+SR EIS A++ + +E G + D+ SL+ K L T+ P
Sbjct: 140 QATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDISESLLDKCLYTNRSPH 199
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
PD++IRT GE RLSDFLLWQ ++S VF P WP+++ F A+ Q+
Sbjct: 200 PDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQ 248
>gi|260808570|ref|XP_002599080.1| hypothetical protein BRAFLDRAFT_281462 [Branchiostoma floridae]
gi|229284356|gb|EEN55092.1| hypothetical protein BRAFLDRAFT_281462 [Branchiostoma floridae]
Length = 347
Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats.
Identities = 81/230 (35%), Positives = 127/230 (55%), Gaps = 3/230 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P H+ IMDGN R+A +G+ R GH G E E + ++GI +T++AFS
Sbjct: 27 LKTGPIPKHVAFIMDGNRRFARKKGMDRAEGHLMGFEKLAETLKWCRDLGINEVTVYAFS 86
Query: 65 INNWRRPVSEISELVKLIKSFLKK---GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R E+ L+++ + + ++ K+ + +RV+GN L DI + EA
Sbjct: 87 IENFKRSKEEVESLMEIARQKFARLLQEKDAIMKHGVCIRVLGNLTLLPLDIQRSIAEAM 146
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++ N L + F Y+SR EIS A++ + + +E G + DV SL+ + L TS PD
Sbjct: 147 VMSKDNDKAFLNVCFAYTSRHEISNAVEEMAEGVEKGLIRPSDVSESLLDRCLYTSHSPD 206
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
P L++RT GE RLSDFLLWQ ++S F+ WP+FS A+ Y
Sbjct: 207 PHLLVRTSGEVRLSDFLLWQSSFSVLSFMEVLWPEFSFWHLCAAVLHYQR 256
>gi|255324387|ref|ZP_05365504.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
tuberculostearicum SK141]
gi|311740759|ref|ZP_07714586.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
pseudogenitalium ATCC 33035]
gi|255298293|gb|EET77593.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
tuberculostearicum SK141]
gi|311304279|gb|EFQ80355.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
pseudogenitalium ATCC 33035]
Length = 258
Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats.
Identities = 86/243 (35%), Positives = 127/243 (52%), Gaps = 8/243 (3%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLT 59
+A ++ P P HI I+ DGN RWA G GHR+G + E+++ + I+ +T
Sbjct: 18 LARLIKGKPQPKHIAIMADGNRRWAREAGFTDISHGHRQGAKKIGEMISWCRDTDIEVVT 77
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
I+ S N +R E+ L +I + S +VR++G+ L D+I +
Sbjct: 78 IYLLSTENLKRSEQEVELLFDIISDVVTHL--SHSDVGCQVRLVGHLDLLPDEIRQRMVT 135
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLD 175
A +T NTG+ + +A Y R EI A++N+ + + + V + I ++L
Sbjct: 136 AAAETEDNTGVIVNVAVGYGGRQEIVDAVQNLVRAEAEKGTTAAEMADRVTAESIGEHLY 195
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
T +PDPDL+IRT GE+RLS FLLWQ AYSE F YWP F + F AL Y+ R RR
Sbjct: 196 TKGLPDPDLVIRTSGEQRLSGFLLWQAAYSEIWFTDTYWPAFRKVDFLRALRDYSQRSRR 255
Query: 236 FGG 238
FG
Sbjct: 256 FGK 258
>gi|195628034|gb|ACG35847.1| undecaprenyl pyrophosphate synthetase [Zea mays]
Length = 307
Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats.
Identities = 85/240 (35%), Positives = 133/240 (55%), Gaps = 3/240 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + S P H+ ++MDGN RWA RGL GH+ G +VA + GI+ LT
Sbjct: 63 LQSGLRRESLPRHVAVVMDGNSRWARERGLTPADGHKAGGRNLERVVALSRAWGIRALTA 122
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
F S N RP +E+ ++ L + + L + I+++VIG+ + + +A
Sbjct: 123 FVCSRENLSRPKAEVDYMMGLSEWLIGDNIDKLSRQGIRLQVIGDAAKMPASLRSAAAQA 182
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS--- 177
++ TR N+ L++ +A YS R ++ +A + + ++ ++ + D+D S+IA L TS
Sbjct: 183 DEATRHNSQLHVMLAICYSGRWDMVQACRELAREAQANRLSPDDIDESVIAGKLATSAAG 242
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+ PDL+IRT GE RLS+FLLWQ AYSE F + WPDF + AL + RDRRFG
Sbjct: 243 EFSCPDLVIRTSGEMRLSNFLLWQSAYSELFFTGKMWPDFGEAEYLEALRSFQGRDRRFG 302
>gi|311113588|ref|YP_003984810.1| di-trans,poly-cis-decaprenylcistransferase [Rothia dentocariosa
ATCC 17931]
gi|310945082|gb|ADP41376.1| di-trans,poly-cis-decaprenylcistransferase [Rothia dentocariosa
ATCC 17931]
Length = 231
Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats.
Identities = 94/225 (41%), Positives = 135/225 (60%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA RGLPR GHR G +IVA A E+GI ++ +AFS NW+R SE+S
Sbjct: 1 MDGNGRWANERGLPRNEGHRAGEAALLDIVAGAIEMGIPYISAYAFSTENWKRSPSEVSF 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
+++ L + +LK +++R G R L +++ L++ E +T NT L + N
Sbjct: 61 IMRFSTEVLNRQLETLKSWGVRIRWAGRRPKLWKNVISQLEQCERETINNTTCTLTMCVN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R EI+ A I QD+++G + + KYLD D+PD DL +R+ GE+R+S+F
Sbjct: 121 YGGRAEIADAAATIAQDVQAGILNPSSITEKTFQKYLDEPDLPDVDLFLRSSGEQRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
LLWQ AY+EFVF+ WPD R + A+ +Y RDRR+GG + K
Sbjct: 181 LLWQSAYAEFVFMNVLWPDVDRLTLYKAVEEYASRDRRYGGATDK 225
>gi|255327344|ref|ZP_05368418.1| undecaprenyl pyrophosphate synthetase [Rothia mucilaginosa ATCC
25296]
gi|255295624|gb|EET74967.1| undecaprenyl pyrophosphate synthetase [Rothia mucilaginosa ATCC
25296]
Length = 269
Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats.
Identities = 91/241 (37%), Positives = 131/241 (54%), Gaps = 7/241 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ S+ S P HIG+++DGN RWAA RGL GH G E + +A E+ I +++
Sbjct: 31 LARSLSPESLPAHIGVLVDGNRRWAAQRGLSTREGHAAGAERIIDFLAWCTELSIPQVSL 90
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S N +RP E++ LV +I +FL + S VR IGN + + L A
Sbjct: 91 YMLSTENLKRPEKELTGLVAVIDAFLVRLVESACGP---VRAIGNIDLIPRQLHERLDWA 147
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVC----SHDVDSSLIAKYLDT 176
+QT G+ + IA Y R EI A++++ ++ + + + I+ +L T
Sbjct: 148 IEQTAHLPGVRVNIAVGYGGRQEIVDAVRSVLREAAAEGASLDSLAEQLSVEDISSHLYT 207
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
+D+PDPDL+IRT GE+RLS F+ WQ AYSEF F WPDF+R F AL Y R RRF
Sbjct: 208 ADMPDPDLLIRTSGEQRLSGFMTWQSAYSEFYFCRALWPDFTRVDFLRALRDYANRSRRF 267
Query: 237 G 237
G
Sbjct: 268 G 268
>gi|197124041|ref|YP_002135992.1| undecaprenyl diphosphate synthase [Anaeromyxobacter sp. K]
gi|220918813|ref|YP_002494117.1| undecaprenyl diphosphate synthase [Anaeromyxobacter dehalogenans
2CP-1]
gi|196173890|gb|ACG74863.1| undecaprenyl diphosphate synthase [Anaeromyxobacter sp. K]
gi|219956667|gb|ACL67051.1| undecaprenyl diphosphate synthase [Anaeromyxobacter dehalogenans
2CP-1]
Length = 251
Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats.
Identities = 86/242 (35%), Positives = 128/242 (52%), Gaps = 6/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ A + + P H+ IIMDGNGRWA RGLPR AGHR+G E + A VG++ LT+
Sbjct: 9 LEARVRARPLPRHVAIIMDGNGRWAETRGLPRVAGHREGSEAVRAVTRTARRVGLEALTL 68
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW RP E+ L++L+ +L+ + +N I++ IG L + L A
Sbjct: 69 YAFSAENWARPDEEVGALMQLLADYLESERAEMMQNGIRLNAIGELDRLPGFVRERLDAA 128
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+T N + L +A +Y R E+ A + +D+ + L T +P
Sbjct: 129 RAETAGNDRMVLTLALSYGGRQELVHAARAAAAARGPA------LDADDLEAALWTRGLP 182
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
+ DL++RT GE+R+S+FLLWQ AY+E F WPDF A+ + R+RRFG
Sbjct: 183 ELDLLVRTSGERRISNFLLWQCAYAELYFSEVLWPDFRDAALLEAIASFQARERRFGLTG 242
Query: 241 KK 242
+
Sbjct: 243 AQ 244
>gi|224031383|gb|ACN34767.1| unknown [Zea mays]
Length = 306
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 85/240 (35%), Positives = 133/240 (55%), Gaps = 3/240 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + S P H+ ++MDGN RWA RGL GH+ G +VA + GI+ LT
Sbjct: 62 LQSGLRRESLPRHVAVVMDGNSRWARERGLTPADGHKAGGRNLERVVALSRAWGIRALTA 121
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
F S N RP +E+ ++ L + + L + I+++VIG+ + + +A
Sbjct: 122 FVCSRENLSRPKAEVDYMMGLSEWLIGDNIDKLSRQGIRLQVIGDAAKMPASLRSAAAQA 181
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS--- 177
++ TR N+ L++ +A YS R ++ +A + + ++ ++ + D+D S+IA L TS
Sbjct: 182 DEATRQNSQLHVMLAICYSGRWDMVQACRELAREAQANRLSPDDIDESIIAGKLATSAAG 241
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+ PDL+IRT GE RLS+FLLWQ AYSE F + WPDF + AL + RDRRFG
Sbjct: 242 EFSCPDLVIRTSGEMRLSNFLLWQSAYSELFFTAKMWPDFGEAEYLEALRSFQGRDRRFG 301
>gi|145595958|ref|YP_001160255.1| undecaprenyl diphosphate synthase [Salinispora tropica CNB-440]
gi|145305295|gb|ABP55877.1| Undecaprenyl pyrophosphate synthetase [Salinispora tropica CNB-440]
Length = 270
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 87/235 (37%), Positives = 131/235 (55%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ + + P H+ ++MDGNGRWA RGLPR GH G + + A E+GI L+ +AF
Sbjct: 26 ALPAEALPRHVAVVMDGNGRWAKERGLPRTKGHEAGEFSLFDAIEGAIELGIPYLSAYAF 85
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRR E+ L+ + +++ L ++V G L ++ L+ AE+
Sbjct: 86 STENWRRSPDEVRFLMGFNRDVIRRRRDQLVDLGVRVVWSGRSGRLWKSVISELQAAEEL 145
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
++ N+ L L NY + EI+ A I +++ +G + V +A+YL +VPD D
Sbjct: 146 SQGNSTLTLQFCVNYGGQAEIADAAAAIAREVAAGRLDPAKVTEKTLARYLYHPEVPDVD 205
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R GE+R S+FLLWQ AY+E VF+ WPDF R ++A Y RDRRFGG
Sbjct: 206 LFLRPSGEQRTSNFLLWQSAYAEMVFLDTLWPDFDRRHLWYACELYAQRDRRFGG 260
>gi|26329837|dbj|BAC28657.1| unnamed protein product [Mus musculus]
gi|126540561|emb|CAM46106.1| dehydrodolichyl diphosphate synthase [Mus musculus]
gi|126541193|emb|CAM46083.1| dehydrodolichyl diphosphate synthase [Mus musculus]
Length = 334
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 83/242 (34%), Positives = 129/242 (53%), Gaps = 6/242 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IMDGN R+A + R GH +G E + +GI +T++AFS
Sbjct: 20 IKAGPVPKHIAFIMDGNRRYAKKCQVERQEGHTQGFNKLAETLRWCLNLGILEVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKS---FLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R SE+ L+ L + L + L+K+ + +RV+G+ L D+ + A
Sbjct: 80 IENFKRSKSEVDGLLDLARQKFSCLMEEQEKLQKHGVCIRVLGDLHLLPLDLQEKIAHAI 139
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T+ L + F Y+SR EI+ A++ + +E G + DV SL+ K L ++ P
Sbjct: 140 QATKNYNKCFLNVCFAYTSRHEIANAVREMAWGVEQGLLEPSDVSESLLDKCLYSNHSPH 199
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PD++IRT GE RLSDFLLWQ ++S VF P WP+++ A+ Q+ R G L +
Sbjct: 200 PDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLCEAILQFQ---RNHGALQQ 256
Query: 242 KG 243
K
Sbjct: 257 KA 258
>gi|222097268|ref|YP_002531325.1| undecaprenyl diphosphate synthase [Bacillus cereus Q1]
gi|221241326|gb|ACM14036.1| undecaprenyl diphosphate synthase [Bacillus cereus Q1]
Length = 210
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 93/210 (44%), Positives = 138/210 (65%)
Query: 30 LPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKG 89
+PR AGH +G++V +I A+++ +K LT++AFS NW+RP E+ L+KL + FL
Sbjct: 1 MPRIAGHHEGMQVVKKITKFASKLNVKVLTLYAFSTENWKRPKKEVDYLMKLPEEFLGTF 60
Query: 90 FYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIK 149
L + N++VRVIG + L +++A ++T+ NTGL L A NY SRDEI A++
Sbjct: 61 LPELIEENVQVRVIGQQDRLPTHTRRAMEKAMEETKENTGLILNFALNYGSRDEIVSAVQ 120
Query: 150 NIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVF 209
++ +D E G V DV +++ YL TS +PDP+L+IRT GE R+S+F+LWQ+AYSEF F
Sbjct: 121 HMMKDREEGKVRVEDVSEEMLSSYLMTSSLPDPELLIRTSGELRISNFMLWQIAYSEFWF 180
Query: 210 IPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
YWPDF+ E +A+ + R RRFGG+
Sbjct: 181 TDVYWPDFTEEHLLNAITDFQHRGRRFGGV 210
>gi|295836755|ref|ZP_06823688.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. SPB74]
gi|197697631|gb|EDY44564.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. SPB74]
Length = 256
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 88/240 (36%), Positives = 130/240 (54%), Gaps = 7/240 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ + P HIG+I+DGN RWA A G GHR G E E + AE ++ +T++
Sbjct: 20 GRLDHAQVPKHIGLILDGNRRWARASGGTTAQGHRAGAEKIEEFLGWCAETDVEVVTLWM 79
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
S +N+ RP SE+ L+ +I+ ++ +V +G L D+ LKEAE
Sbjct: 80 LSTDNFDRPESELIPLLGIIEDSVR---ALAADGRWRVHHVGALDILPDNTRTTLKEAEA 136
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSD 178
T NTG+ + +A Y R EI+ A++++ D + VD LI+++L T
Sbjct: 137 ATSDNTGILVNVAVGYGGRQEIADAVRSLLHDAARKGTSFEELAEAVDIDLISEHLYTRG 196
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PDPDL+IRT GE+RLS F+LWQ A+SE+ F +WP F + F A+ Y R RR+GG
Sbjct: 197 QPDPDLVIRTSGEQRLSGFMLWQSAHSEYYFCEVFWPAFRKVDFLRAMRDYAARHRRYGG 256
>gi|145223301|ref|YP_001133979.1| undecaprenyl diphosphate synthase [Mycobacterium gilvum PYR-GCK]
gi|145215787|gb|ABP45191.1| Undecaprenyl pyrophosphate synthetase [Mycobacterium gilvum
PYR-GCK]
Length = 230
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 87/229 (37%), Positives = 131/229 (57%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ ++MDGNGRWA RGL R GH+ G V +I A E+GIK+LT++AFS NW+
Sbjct: 1 MPQHVAVVMDGNGRWATQRGLGRTEGHKMGEAVLIDITCGAIEIGIKHLTVYAFSTENWK 60
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ L+ + +++ +L +++R +G+R + ++ AE T N
Sbjct: 61 RSTEEVRFLMGFNREVVRRRRENLNDMGVRMRWVGSRPRMWSSVIKEFDIAEQMTVDNDV 120
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ + NY R EI A + + Q G + + + + AK+L SD+PD DL IRT
Sbjct: 121 ITINYCVNYGGRTEIVEAARELAQQAVDGKIKPNRITEAQFAKHLHRSDIPDVDLFIRTS 180
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GE+R S+FLLWQ AY+E+VF + WPD+ R + A +Y R+RRFG
Sbjct: 181 GEQRASNFLLWQAAYAEYVFQDKLWPDYDRRDLWAACEEYVHRNRRFGR 229
>gi|89255662|ref|YP_513023.1| undecaprenyl pyrophosphate synthase [Francisella tularensis subsp.
holarctica LVS]
gi|134302593|ref|YP_001122564.1| undecaprenyl pyrophosphate synthetase [Francisella tularensis
subsp. tularensis WY96-3418]
gi|187932151|ref|YP_001892136.1| undecaprenyl diphosphate synthase [Francisella tularensis subsp.
mediasiatica FSC147]
gi|224456551|ref|ZP_03665024.1| undecaprenyl diphosphate synthase [Francisella tularensis subsp.
tularensis MA00-2987]
gi|89143493|emb|CAJ78669.1| undecaprenyl pyrophosphate synthetase [Francisella tularensis
subsp. holarctica LVS]
gi|134050370|gb|ABO47441.1| undecaprenyl diphosphate synthase [Francisella tularensis subsp.
tularensis WY96-3418]
gi|187713060|gb|ACD31357.1| undecaprenyl diphosphate synthase [Francisella tularensis subsp.
mediasiatica FSC147]
gi|282158614|gb|ADA78005.1| undecaprenyl diphosphate synthase [Francisella tularensis subsp.
tularensis NE061598]
Length = 240
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 93/236 (39%), Positives = 140/236 (59%), Gaps = 1/236 (0%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ H+ IIMDGNGRWA +R PR GHR + + + E I+ LT+FAF +
Sbjct: 5 KENILRHLAIIMDGNGRWAKSRLKPRIFGHRNSVSSVDATIEYCVENNIEMLTLFAFGRD 64
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP E+S+L+ L LK L NNI V V+G+R L + ++ +++ +E T+
Sbjct: 65 NWLRPAQEVSDLMDLFYKTLKDKTPKLHDNNIVVTVVGDRSRLSNKLIGMIEYSESLTKS 124
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTGL L +A +Y+ R +I A + I ++++ G + ++D + AKYL ++P DL+I
Sbjct: 125 NTGLKLRLAVDYAGRWDIVEATRAIAREVDIGKLSVDEIDQNSFAKYLVGGNMP-VDLLI 183
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE RLSDF+LWQ+AY+E F WPDFS++ A+ + R RRFG ++
Sbjct: 184 RTSGEVRLSDFMLWQLAYAEMYFTDIMWPDFSKQELTRAVEYFYSRQRRFGKSGEQ 239
>gi|182436299|ref|YP_001824018.1| putative undecaprenyl diphosphate synthase [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|178464815|dbj|BAG19335.1| putative undecaprenyl diphosphate synthase [Streptomyces griseus
subsp. griseus NBRC 13350]
Length = 256
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 78/240 (32%), Positives = 127/240 (52%), Gaps = 7/240 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ P HIG+I+DGN RWA A G GH+ G + +E++ E ++ +T++
Sbjct: 20 GRLDHDQVPKHIGVILDGNRRWAKASGGSAVQGHQAGADKISELLGWCNETDVEVVTLWM 79
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
S +N+ RP E+ L+ +I++ ++ +V +G L + VLKEA++
Sbjct: 80 LSTDNFDRPEHELKPLLGIIENTVRNL---AADGRWRVHHVGTLDLLPPETQTVLKEAQE 136
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDS----SLIAKYLDTSD 178
T G+ + +A Y R EI+ A++++ + ++ LI+++L T
Sbjct: 137 ATSDIDGIIVNVAVGYGGRQEIADAVRSLLLEHSEKGTTFEELAEVVSTDLISEHLYTRG 196
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PDPDL+IRT GE+RLS F+LWQ A+SE+ F +WP F + F AL Y R RR+G
Sbjct: 197 QPDPDLVIRTSGEQRLSGFMLWQSAHSEYYFCEVFWPAFRKVDFLRALRDYAARHRRYGA 256
>gi|194702840|gb|ACF85504.1| unknown [Zea mays]
Length = 306
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 85/240 (35%), Positives = 133/240 (55%), Gaps = 3/240 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + S P H+ ++MDGN RWA RGL GH+ G +VA + GI+ LT
Sbjct: 62 LQSGLRRESLPRHVAVVMDGNSRWARERGLTPADGHKAGGRNLERVVALSRAWGIRALTA 121
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
F S N RP +E+ ++ L + + L + I+++VIG+ + + +A
Sbjct: 122 FVCSRENLSRPKAEVDYMMGLSEWLIGDNIDKLSRQGIRLQVIGDAAKMPASLRSAAAQA 181
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS--- 177
++ TR N+ L++ +A YS R ++ +A + + ++ ++ + D+D S+IA L TS
Sbjct: 182 DEATRQNSQLHVMLAICYSGRWDMVQACRELAREAQANRLSPDDIDESIIAGKLATSAAG 241
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+ PDL+IRT GE RLS+FLLWQ AYSE F + WPDF + AL + RDRRFG
Sbjct: 242 EFSCPDLVIRTSGEMRLSNFLLWQSAYSELFFTAKMWPDFGEAEYLEALRSFQGRDRRFG 301
>gi|254373691|ref|ZP_04989175.1| hypothetical protein FTDG_01700 [Francisella novicida GA99-3548]
gi|151571413|gb|EDN37067.1| hypothetical protein FTDG_01700 [Francisella novicida GA99-3548]
Length = 257
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 94/236 (39%), Positives = 139/236 (58%), Gaps = 1/236 (0%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ H+ IIMDGNGRWA R PR GHR + + + E I+ LT+FAF +
Sbjct: 22 KENILRHLAIIMDGNGRWAKNRLKPRIFGHRNSVSSVDATIEYCVENNIEMLTLFAFGRD 81
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP E+S+L+ L LK L NNI V V+G+R L D ++ +++ +E T+
Sbjct: 82 NWLRPAQEVSDLMDLFYKTLKDKTPKLHDNNIVVTVVGDRSRLSDKLIGMIEYSESLTKS 141
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTGL L +A +Y+ R +I A + I ++++ G + ++D + AKYL ++P DL+I
Sbjct: 142 NTGLKLRLAVDYAGRWDIVEATRAIAREVDIGKLSVDEIDQNSFAKYLVGGNMP-VDLLI 200
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE RLSDF+LWQ+AY+E F WPDFS++ A+ + R RRFG ++
Sbjct: 201 RTSGEVRLSDFMLWQLAYAEMYFTDIMWPDFSKQELTRAVEYFYSRQRRFGKSGEQ 256
>gi|172040282|ref|YP_001799996.1| hypothetical protein cur_0602 [Corynebacterium urealyticum DSM
7109]
gi|171851586|emb|CAQ04562.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
Length = 271
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 84/242 (34%), Positives = 119/242 (49%), Gaps = 7/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGL-PRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ S+ P HI I+ DGN RWA G GHR G E+ E+GI ++T
Sbjct: 31 LARSLRDLPRPAHIAIMADGNRRWARENGFTDVSHGHRVGARKIAEMCNWCDEMGIASVT 90
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++ S N +R E+ L+K+I + + K +VR +G+ L + L+
Sbjct: 91 VYLLSTENLKREPEELELLIKIIGDVADELGQA--KAGFRVRSVGHLELLPQQLRERLER 148
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNI----FQDIESGSVCSHDVDSSLIAKYLD 175
E T NTG+ + +A Y R EI A+++ D + + + ++
Sbjct: 149 NEKLTANNTGVCVNVAVGYGGRQEIVDAVRDTVAELAADGTPAEKIAEKITVDSLGNHMY 208
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
T PDPDL+IRT GE+RLS FLLWQ AYSE F YWP F R F AL +Y+ R RR
Sbjct: 209 TKGQPDPDLVIRTSGEQRLSGFLLWQSAYSEIWFTDTYWPAFRRVDFLRALREYSQRHRR 268
Query: 236 FG 237
FG
Sbjct: 269 FG 270
>gi|126466136|ref|YP_001041245.1| undecaprenyl pyrophosphate synthetase [Staphylothermus marinus F1]
gi|126014959|gb|ABN70337.1| Undecaprenyl pyrophosphate synthetase [Staphylothermus marinus F1]
Length = 269
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 88/238 (36%), Positives = 131/238 (55%), Gaps = 3/238 (1%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P HIGII DGN RWA G GH G + E++ E+ I+ +T++A
Sbjct: 32 QIKNGPFPVHIGIIPDGNRRWAKRSGFDPKQGHEYGYQRIKEVLKWIWELNIRYVTVYAM 91
Query: 64 SINN-WRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
S N RP+ E L ++K L++ + + I+V+V G + DI+ + K+
Sbjct: 92 SSENCLYRPLDEREHLFNIVKKGLQELMNMPDIHEKKIQVKVFGRLELVPKDIVELAKKI 151
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E+QT+ L IA Y R EI A++ I +D +SG + ++ ++YL T+ P
Sbjct: 152 EEQTKDYREYRLNIALCYGGRQEILDAVRKIVKDAQSGKINPESINEETFSRYLYTNGCP 211
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DPDLIIRT GE R+S+FLLWQ AYSE F YWP+F + F+ A+ Y R+RR+G
Sbjct: 212 DPDLIIRTSGEVRISNFLLWQSAYSELYFCEAYWPEFRKIDFWRAIRSYQRRERRYGR 269
>gi|315453570|ref|YP_004073840.1| undecaprenyl pyrophosphate synthetase [Helicobacter felis ATCC
49179]
gi|315132622|emb|CBY83250.1| undecaprenyl pyrophosphate synthetase [Helicobacter felis ATCC
49179]
Length = 226
Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 86/227 (37%), Positives = 130/227 (57%), Gaps = 6/227 (2%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA +G PR GH++GI +I A+ I LT++AFS NW RP
Sbjct: 6 HLAIIMDGNGRWAKQQGKPRTHGHQQGINALRKITIWCAQNHIAYLTLYAFSTENWSRPK 65
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+E+ L++++K +L + + ++ I+ + IGN + + E +T +T L
Sbjct: 66 TEVDFLMRMLKKYLLQERPTYLEHKIRFKAIGNLKKFSSALQKTILNLEQETAKHTALTQ 125
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A NY RDEI+RA + + G + LI ++LDT+ +PD DL++RTGGE
Sbjct: 126 ILALNYGGRDEIARACGRVLELGLKGDL------QELIGRHLDTAGLPDVDLLVRTGGEM 179
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLS+FLLWQ Y+E F P WPDF+ + + + R R+FG +
Sbjct: 180 RLSNFLLWQSNYAELFFSPVLWPDFTPQHLQEIIKIFKQRQRKFGKI 226
>gi|326776928|ref|ZP_08236193.1| Undecaprenyl pyrophosphate synthase [Streptomyces cf. griseus
XylebKG-1]
gi|326657261|gb|EGE42107.1| Undecaprenyl pyrophosphate synthase [Streptomyces cf. griseus
XylebKG-1]
Length = 253
Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 78/240 (32%), Positives = 127/240 (52%), Gaps = 7/240 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ P HIG+I+DGN RWA A G GH+ G + +E++ E ++ +T++
Sbjct: 17 GRLDHDQVPKHIGVILDGNRRWAKASGGSAVQGHQAGADKISELLGWCNETDVEVVTLWM 76
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
S +N+ RP E+ L+ +I++ ++ +V +G L + VLKEA++
Sbjct: 77 LSTDNFDRPEHELKPLLGIIENTVRNL---AADGRWRVHHVGTLDLLPPETQTVLKEAQE 133
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDS----SLIAKYLDTSD 178
T G+ + +A Y R EI+ A++++ + ++ LI+++L T
Sbjct: 134 ATSDIDGIIVNVAVGYGGRQEIADAVRSLLLEHSEKGTTFEELAEVVSTDLISEHLYTRG 193
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PDPDL+IRT GE+RLS F+LWQ A+SE+ F +WP F + F AL Y R RR+G
Sbjct: 194 QPDPDLVIRTSGEQRLSGFMLWQSAHSEYYFCEVFWPAFRKVDFLRALRDYAARHRRYGA 253
>gi|318057623|ref|ZP_07976346.1| undecaprenyl pyrophosphate synthase [Streptomyces sp. SA3_actG]
gi|318080077|ref|ZP_07987409.1| undecaprenyl pyrophosphate synthase [Streptomyces sp. SA3_actF]
Length = 253
Score = 256 bits (653), Expect = 3e-66, Method: Composition-based stats.
Identities = 88/240 (36%), Positives = 130/240 (54%), Gaps = 7/240 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ + P HIG+I+DGN RWA A G GHR G E E + AE ++ +T++
Sbjct: 17 GRLDHAQVPKHIGLILDGNRRWARASGGTTAQGHRAGAEKIEEFLGWCAETDVEVVTLWM 76
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
S +N+ RP SE+ L+ +I+ ++ +V +G L D+ LKEAE
Sbjct: 77 LSTDNFDRPESELVPLLGIIEDSVR---ALAADGRWRVHHVGALDILPDNTRTTLKEAEA 133
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSD 178
T NTG+ + +A Y R EI+ A++++ D + VD LI+++L T
Sbjct: 134 ATSDNTGILVNVAVGYGGRQEIADAVRSLLHDAARKGTSFEELAEAVDIDLISEHLYTRG 193
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PDPDL+IRT GE+RLS F+LWQ A+SE+ F +WP F + F A+ Y R RR+GG
Sbjct: 194 QPDPDLVIRTSGEQRLSGFMLWQSAHSEYYFCEVFWPAFRKVDFLRAMRDYAARHRRYGG 253
>gi|62258192|gb|AAX77773.1| unknown protein [synthetic construct]
Length = 292
Score = 256 bits (653), Expect = 3e-66, Method: Composition-based stats.
Identities = 93/236 (39%), Positives = 140/236 (59%), Gaps = 1/236 (0%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ H+ IIMDGNGRWA +R PR GHR + + + E I+ LT+FAF +
Sbjct: 48 KENILRHLAIIMDGNGRWAKSRLKPRIFGHRNSVSSVDATIEYCVENNIEMLTLFAFGRD 107
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP E+S+L+ L LK L NNI V V+G+R L + ++ +++ +E T+
Sbjct: 108 NWLRPAQEVSDLMDLFYKTLKDKTPKLHDNNIVVTVVGDRSRLSNKLIGMIEYSESLTKS 167
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTGL L +A +Y+ R +I A + I ++++ G + ++D + AKYL ++P DL+I
Sbjct: 168 NTGLKLRLAVDYAGRWDIVEATRAIAREVDIGKLSVDEIDQNSFAKYLVGGNMP-VDLLI 226
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE RLSDF+LWQ+AY+E F WPDFS++ A+ + R RRFG ++
Sbjct: 227 RTSGEVRLSDFMLWQLAYAEMYFTDIMWPDFSKQELTRAVEYFYSRQRRFGKSGEQ 282
>gi|34580494|ref|ZP_00141974.1| undecaprenyl pyrophosphate synthetase [Rickettsia sibirica 246]
gi|157828462|ref|YP_001494704.1| undecaprenyl pyrophosphate synthetase [Rickettsia rickettsii str.
'Sheila Smith']
gi|42559752|sp|Q7PBU9|UPPS_RICSI RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|28261879|gb|EAA25383.1| undecaprenyl pyrophosphate synthetase [Rickettsia sibirica 246]
gi|157800943|gb|ABV76196.1| undecaprenyl pyrophosphate synthetase [Rickettsia rickettsii str.
'Sheila Smith']
Length = 226
Score = 256 bits (653), Expect = 3e-66, Method: Composition-based stats.
Identities = 85/227 (37%), Positives = 123/227 (54%), Gaps = 6/227 (2%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGN RWA L + GH+ G + E++ + I +T++ FS NW+R
Sbjct: 5 KHLAIIMDGNARWADQHNLTKSEGHKAGADKIRELLPEFLNLNIPYITLYTFSSENWQRS 64
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
+E+ L+KL+ +LK +L KN +K++VIG L + + A + T+ N +
Sbjct: 65 STEVDFLIKLLSIYLKTELNNLHKNGVKIKVIGRLTLLSSSLQKQINNAIELTKNNNKIT 124
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L IAF+Y SR EI A I + S I L ++PD DL+IR GG
Sbjct: 125 LCIAFSYGSRQEIVDACTKIITSGKKAVSDSD------IQHALYDPEMPDVDLLIRPGGV 178
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R+S+FLLWQ AY+E F P+YWPDF++ A+N Y+ R R FG
Sbjct: 179 YRISNFLLWQAAYAELYFSPKYWPDFNKYDIQEAINDYSKRKRTFGK 225
>gi|15892513|ref|NP_360227.1| undecaprenyl pyrophosphate synthetase [Rickettsia conorii str.
Malish 7]
gi|165933180|ref|YP_001649969.1| undecaprenyl pyrophosphate synthetase [Rickettsia rickettsii str.
Iowa]
gi|229586703|ref|YP_002845204.1| Undecaprenyl pyrophosphate synthetase [Rickettsia africae ESF-5]
gi|238650885|ref|YP_002916741.1| undecaprenyl pyrophosphate synthetase [Rickettsia peacockii str.
Rustic]
gi|42559858|sp|Q92I30|UPPS_RICCN RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|15619673|gb|AAL03128.1| undecaprenyl pyrophosphate synthetase [Rickettsia conorii str.
Malish 7]
gi|165908267|gb|ABY72563.1| undecaprenyl pyrophosphate synthetase [Rickettsia rickettsii str.
Iowa]
gi|228021753|gb|ACP53461.1| Undecaprenyl pyrophosphate synthetase [Rickettsia africae ESF-5]
gi|238624983|gb|ACR47689.1| undecaprenyl pyrophosphate synthetase [Rickettsia peacockii str.
Rustic]
Length = 235
Score = 256 bits (653), Expect = 3e-66, Method: Composition-based stats.
Identities = 85/227 (37%), Positives = 123/227 (54%), Gaps = 6/227 (2%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGN RWA L + GH+ G + E++ + I +T++ FS NW+R
Sbjct: 14 KHLAIIMDGNARWADQHNLTKSEGHKAGADKIRELLPEFLNLNIPYITLYTFSSENWQRS 73
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
+E+ L+KL+ +LK +L KN +K++VIG L + + A + T+ N +
Sbjct: 74 STEVDFLIKLLSIYLKTELNNLHKNGVKIKVIGRLTLLSSSLQKQINNAIELTKNNNKIT 133
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L IAF+Y SR EI A I + S I L ++PD DL+IR GG
Sbjct: 134 LCIAFSYGSRQEIVDACTKIITSGKKAVSDSD------IQHALYDPEMPDVDLLIRPGGV 187
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R+S+FLLWQ AY+E F P+YWPDF++ A+N Y+ R R FG
Sbjct: 188 YRISNFLLWQAAYAELYFSPKYWPDFNKYDIQEAINDYSKRKRTFGK 234
>gi|315425668|dbj|BAJ47326.1| undecaprenyl pyrophosphate synthetase [Candidatus Caldiarchaeum
subterraneum]
gi|315427570|dbj|BAJ49169.1| undecaprenyl pyrophosphate synthetase [Candidatus Caldiarchaeum
subterraneum]
Length = 260
Score = 256 bits (653), Expect = 3e-66, Method: Composition-based stats.
Identities = 91/241 (37%), Positives = 136/241 (56%), Gaps = 4/241 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ S P H+G+I+DGN RWA RG P GH G + EI+ E+GIK +T+
Sbjct: 19 LLRNVSSGQMPSHVGLILDGNRRWARVRGWPPWKGHAAGADRVEEILDWLLELGIKTVTL 78
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+ S N RRP+ E+ E+ +LI+ + K+ +KV+VIG + L +++ L+
Sbjct: 79 YILSTENLRRPMHEVEEIFRLIEEKAYSLLRDPKIYKHRVKVKVIGRKDMLPPNVVEALE 138
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
+ E T + L +A Y R EI A++ I + +++G + +D K+L T+
Sbjct: 139 KLEHATERHDNRFLNLAIAYGGRLEILEAVRQIAEQVKTGQLSPEQIDEKTFEKHLYTNG 198
Query: 179 V--PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
V P+PDLIIRT GE R+S+FLLWQ AYSEFVF PDF A+ Y R+RRF
Sbjct: 199 VPNPEPDLIIRTSGETRISNFLLWQSAYSEFVFQDVNLPDFRYIDLLRAIRTYQSRERRF 258
Query: 237 G 237
G
Sbjct: 259 G 259
>gi|118474388|ref|YP_891925.1| undecaprenyl diphosphate synthase [Campylobacter fetus subsp. fetus
82-40]
gi|118413614|gb|ABK82034.1| undecaprenyl diphosphate synthase [Campylobacter fetus subsp. fetus
82-40]
Length = 225
Score = 256 bits (653), Expect = 3e-66, Method: Composition-based stats.
Identities = 100/228 (43%), Positives = 145/228 (63%), Gaps = 7/228 (3%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+H+ IIMDGNGRWA RGL R GH+ G V +IV+ + IKNLT++AFS NW+RP
Sbjct: 5 NHLAIIMDGNGRWAKKRGLVRTNGHQIGANVVEDIVSYCRKNSIKNLTLYAFSTENWKRP 64
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE+ L+ L+K F+K L +NNI+ IGN L++D+ + +++T N+ LN
Sbjct: 65 KSEVDFLMNLLKKFIKLKENMLLENNIRFSTIGNLEPLNEDLKFDILNLKEKTMNNSSLN 124
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L +A NY S+DEI RAIK + +++ + I+K+LDT++ D DL+IRTG E
Sbjct: 125 LILAINYGSKDEIIRAIKKTL-------LYGEEINEASISKHLDTNEFGDVDLLIRTGAE 177
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+RLS+FLLWQ +Y+E F P WPDF+ + + + Y + R+FGGL
Sbjct: 178 QRLSNFLLWQASYAELCFTPTLWPDFNSDELNNIVKNYKNKHRKFGGL 225
>gi|24215993|ref|NP_713474.1| undecaprenyl pyrophosphate synthase [Leptospira interrogans serovar
Lai str. 56601]
gi|45656745|ref|YP_000831.1| undecaprenyl pyrophosphate synthase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|42559820|sp|Q8F144|UPPS_LEPIN RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|73920267|sp|Q72U10|UPPS_LEPIC RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|24197217|gb|AAN50492.1| undecaprenyl pyrophosphate synthase [Leptospira interrogans serovar
Lai str. 56601]
gi|45599981|gb|AAS69468.1| undecaprenyl pyrophosphate synthetase protein [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
Length = 241
Score = 256 bits (653), Expect = 3e-66, Method: Composition-based stats.
Identities = 93/237 (39%), Positives = 142/237 (59%), Gaps = 1/237 (0%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ S+ P HI +IMDGNGRWA +RG R GHR+G + + ++ A+ E+G+KN++++AFS
Sbjct: 3 LFESNLPKHIAVIMDGNGRWATSRGKSRSEGHREGAQAIDRLMDASLELGLKNISLYAFS 62
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RPV+EI + L+ F++ ++ K I++ G+R L +L + A D+T
Sbjct: 63 TENWKRPVTEIRSIFSLLIEFIETRLDTIHKRGIRILHSGSRKKLTRGVLDKIDFAVDKT 122
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD-VDSSLIAKYLDTSDVPDPD 183
+ N L + NY SRDE+ RA + +F + + V + K+L TS +P D
Sbjct: 123 QKNKNLTVNFCLNYGSRDELLRAAQELFLERKRSKVALEKPLKEKEFEKFLYTSILPPVD 182
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
L+IRT GE+RLS+FLLWQ AY+E F WP+F + +L Y R R+FGGL+
Sbjct: 183 LLIRTAGEQRLSNFLLWQSAYAELYFTDTLWPEFDKNSLVDSLKWYETRTRKFGGLT 239
>gi|56707470|ref|YP_169366.1| undecaprenyl pyrophosphate synthase [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110669941|ref|YP_666498.1| undecaprenyl pyrophosphate synthetase [Francisella tularensis
subsp. tularensis FSC198]
gi|115314163|ref|YP_762886.1| undecaprenyl pyrophosphate synthetase [Francisella tularensis
subsp. holarctica OSU18]
gi|254367053|ref|ZP_04983089.1| undecaprenyl pyrophosphate synthetase [Francisella tularensis
subsp. holarctica 257]
gi|254368531|ref|ZP_04984547.1| undecaprenyl pyrophosphate synthetase [Francisella tularensis
subsp. holarctica FSC022]
gi|254370836|ref|ZP_04986841.1| undecaprenyl pyrophosphate synthetase [Francisella tularensis
subsp. tularensis FSC033]
gi|254874308|ref|ZP_05247018.1| undecaprenyl pyrophosphate synthetase [Francisella tularensis
subsp. tularensis MA00-2987]
gi|73920259|sp|Q5NHX6|UPPS_FRATT RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|56603962|emb|CAG44950.1| undecaprenyl pyrophosphate synthetase [Francisella tularensis
subsp. tularensis SCHU S4]
gi|110320274|emb|CAL08333.1| undecaprenyl pyrophosphate synthetase [Francisella tularensis
subsp. tularensis FSC198]
gi|115129062|gb|ABI82249.1| di-trans,poly-cis-decaprenylcistransferase [Francisella tularensis
subsp. holarctica OSU18]
gi|134252879|gb|EBA51973.1| undecaprenyl pyrophosphate synthetase [Francisella tularensis
subsp. holarctica 257]
gi|151569079|gb|EDN34733.1| undecaprenyl pyrophosphate synthetase [Francisella tularensis
subsp. tularensis FSC033]
gi|157121434|gb|EDO65625.1| undecaprenyl pyrophosphate synthetase [Francisella tularensis
subsp. holarctica FSC022]
gi|254840307|gb|EET18743.1| undecaprenyl pyrophosphate synthetase [Francisella tularensis
subsp. tularensis MA00-2987]
Length = 257
Score = 256 bits (653), Expect = 3e-66, Method: Composition-based stats.
Identities = 93/236 (39%), Positives = 140/236 (59%), Gaps = 1/236 (0%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ H+ IIMDGNGRWA +R PR GHR + + + E I+ LT+FAF +
Sbjct: 22 KENILRHLAIIMDGNGRWAKSRLKPRIFGHRNSVSSVDATIEYCVENNIEMLTLFAFGRD 81
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP E+S+L+ L LK L NNI V V+G+R L + ++ +++ +E T+
Sbjct: 82 NWLRPAQEVSDLMDLFYKTLKDKTPKLHDNNIVVTVVGDRSRLSNKLIGMIEYSESLTKS 141
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTGL L +A +Y+ R +I A + I ++++ G + ++D + AKYL ++P DL+I
Sbjct: 142 NTGLKLRLAVDYAGRWDIVEATRAIAREVDIGKLSVDEIDQNSFAKYLVGGNMP-VDLLI 200
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE RLSDF+LWQ+AY+E F WPDFS++ A+ + R RRFG ++
Sbjct: 201 RTSGEVRLSDFMLWQLAYAEMYFTDIMWPDFSKQELTRAVEYFYSRQRRFGKSGEQ 256
>gi|254449482|ref|ZP_05062919.1| di-trans,poly-cis-decaprenylcistransferase [Octadecabacter
antarcticus 238]
gi|198263888|gb|EDY88158.1| di-trans,poly-cis-decaprenylcistransferase [Octadecabacter
antarcticus 238]
Length = 224
Score = 256 bits (653), Expect = 3e-66, Method: Composition-based stats.
Identities = 100/223 (44%), Positives = 141/223 (63%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA R PR GH G EIV A G+K LT+FAFS NW+R +E++
Sbjct: 1 MDGNGRWAQMRNRPRLFGHHAGARRVREIVEACPAEGVKYLTVFAFSTENWKRTQTEVAG 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+KL + ++++ L N ++VR IG+R+ LDD ++ ++ E E T N ++L +A N
Sbjct: 61 LMKLFRRYIQREARDLLANGVRVRFIGDRVRLDDKLVRLMDELELLTSQNDRVHLTVALN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y RDE++RA + + D+ +G + DV + KYLDT +PDPDL+IRT GE R+S+F
Sbjct: 121 YGGRDEVTRAARRLALDVAAGKLMPADVGDETLPKYLDTCFLPDPDLVIRTSGEARISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LLWQ AY+E+ FI WPDF+ E+F L + RDRRFG +
Sbjct: 181 LLWQSAYAEYEFIDTLWPDFTPEVFAKVLTGFKARDRRFGAVK 223
>gi|226505658|ref|NP_001149894.1| undecaprenyl pyrophosphate synthetase [Zea mays]
gi|195635319|gb|ACG37128.1| undecaprenyl pyrophosphate synthetase [Zea mays]
Length = 307
Score = 256 bits (653), Expect = 3e-66, Method: Composition-based stats.
Identities = 85/240 (35%), Positives = 133/240 (55%), Gaps = 3/240 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + S P H+ ++MDGN RWA RGL GH+ G +VA + GI+ LT
Sbjct: 63 LQSGLRRESLPRHVAVVMDGNSRWARERGLTPADGHKAGGRNLERVVALSRAWGIRALTA 122
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
F S N RP +E+ ++ L + + L + I+++VIG+ + + +A
Sbjct: 123 FVCSRENLXRPKAEVDYMMGLSEWLIGDNIDKLSRQGIRLQVIGDAAKMPASLRSAAAQA 182
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS--- 177
++ TR N+ L++ +A YS R ++ +A + + ++ ++ + D+D S+IA L TS
Sbjct: 183 DEATRHNSQLHVMLAICYSGRWDMVQACRELAREAQANRLSPDDIDESVIAGKLATSAAG 242
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+ PDL+IRT GE RLS+FLLWQ AYSE F + WPDF + AL + RDRRFG
Sbjct: 243 EFSCPDLVIRTSGEMRLSNFLLWQSAYSELFFTGKMWPDFGEAEYLEALRSFQGRDRRFG 302
>gi|184201411|ref|YP_001855618.1| short-chain Z-isoprenyl diphosphate synthase [Kocuria rhizophila
DC2201]
gi|183581641|dbj|BAG30112.1| short-chain Z-isoprenyl diphosphate synthase [Kocuria rhizophila
DC2201]
Length = 253
Score = 256 bits (653), Expect = 3e-66, Method: Composition-based stats.
Identities = 81/242 (33%), Positives = 123/242 (50%), Gaps = 7/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ ++ P H+G+++DGN RWA G GHR G E + E+ I+ +T+
Sbjct: 15 LARTLDPHELPHHVGVLVDGNRRWAKQFGATTEEGHRAGARKIVEFLRWCHELDIQVVTL 74
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S N RP E++ L+++I +++ +++ +G +L + + + +
Sbjct: 75 YVLSTENLNRPAEELTALLEIITDLMRQLQDEGL---CRIQAVGALATLPEALQEQVACS 131
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLDT 176
+T N G +L IA Y R EI A + + D ++ V I+++L T
Sbjct: 132 VRRTVSNPGPHLNIAVGYGGRQEIVDAAREVLADADARGESLAQVARSLSVEDISEHLYT 191
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
PDPDL+IRT GE+RLS FL+WQ AYSEF F WPDF R F AL Y R RRF
Sbjct: 192 RGQPDPDLLIRTSGEQRLSGFLMWQSAYSEFYFCEALWPDFRRVDFLRALRDYARRHRRF 251
Query: 237 GG 238
GG
Sbjct: 252 GG 253
>gi|313679983|ref|YP_004057722.1| undecaprenyl pyrophosphate synthetase [Oceanithermus profundus DSM
14977]
gi|313152698|gb|ADR36549.1| Undecaprenyl pyrophosphate synthetase [Oceanithermus profundus DSM
14977]
Length = 228
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 100/233 (42%), Positives = 133/233 (57%), Gaps = 7/233 (3%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P H+ IIMDGNGRWA ARGLPR GH G E V+ A E G++ LT+FAFS NW
Sbjct: 2 SLPRHVAIIMDGNGRWAEARGLPRYRGHLAGHGAIREAVSGALEAGVEWLTLFAFSTENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RRP SE+ L +L +S L++ L + +++ +IG+RL L D + ++ AE +
Sbjct: 62 RRPSSEVRALFELFESVLREETPELVERGVRIHIIGDRLHLPDSLRAAIEAAERASANAD 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
L+L A NY R EI RA + + + + ++PDPDLIIRT
Sbjct: 122 RLHLVGALNYGGRQEIVRAAAQLA-------ALGEPITEASLRAAFYLPEMPDPDLIIRT 174
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
GE RLS+F LWQ AYSE WPDF++E F HA+ Y R RRFGG+ +
Sbjct: 175 SGEMRLSNFFLWQSAYSEIWVTETLWPDFTKEEFAHAIRAYQTRRRRFGGVPQ 227
>gi|242309659|ref|ZP_04808814.1| undecaprenyl pyrophosphate synthetase [Helicobacter pullorum MIT
98-5489]
gi|239523660|gb|EEQ63526.1| undecaprenyl pyrophosphate synthetase [Helicobacter pullorum MIT
98-5489]
Length = 224
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 89/229 (38%), Positives = 131/229 (57%), Gaps = 8/229 (3%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA R PR GH++G + + I A+ GI LT++AFS NW RP
Sbjct: 3 KHLAIIMDGNGRWAKNRFKPRFFGHQEGAKTIHSITETCAKKGISYLTLYAFSTENWNRP 62
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR-LNTGL 130
SEI L+ L+ +L++ + +NI+ +VIG+ + + + + T+ GL
Sbjct: 63 KSEIDFLMNLLDKYLQEQEQTYLVSNIRFKVIGDISTFSPKLQEKIHYLQSITQEKCNGL 122
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY S+DE+ RA I ++ I++ LDT+ +P+ D++IRTGG
Sbjct: 123 TQILALNYGSKDELRRAFLKIQAQKL-------EITQETISQNLDTATIPEVDMLIRTGG 175
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+RLS+FLLWQ AY+E F WPDF L +++LR RRFGG+
Sbjct: 176 EQRLSNFLLWQSAYAELFFTKTLWPDFCPAELEQMLQEFSLRQRRFGGI 224
>gi|67459048|ref|YP_246672.1| undecaprenyl pyrophosphate synthetase [Rickettsia felis URRWXCal2]
gi|73920273|sp|Q4ULR6|UPPS_RICFE RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|67004581|gb|AAY61507.1| Undecaprenyl pyrophosphate synthetase [Rickettsia felis URRWXCal2]
Length = 235
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 84/227 (37%), Positives = 124/227 (54%), Gaps = 6/227 (2%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGN RWA L + GH+ G + E++ + I +T++ FS NW+R
Sbjct: 14 KHLAIIMDGNARWADQHNLTKSEGHKAGADKIRELLPEFINLNIPYITLYTFSSENWQRS 73
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
+E+ L+KL+ + K SL KN +K++VIG L + + A + T+ N +
Sbjct: 74 STEVDFLIKLLSIYFKNELNSLHKNGVKIKVIGRLNLLSSSLQKQINNAIELTKNNNKIT 133
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L IAF+Y SR EI A I + ++ S I L ++PD DL+IR GG
Sbjct: 134 LCIAFSYGSRQEIVDACTKIIASGKK------EISESDIGHALYDPEMPDVDLLIRPGGV 187
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R+S+FLLWQ AY+E F P+YWP F+++ A+N Y+ R R FG
Sbjct: 188 YRISNFLLWQAAYAELYFSPKYWPAFNKDDIIEAINDYSKRKRTFGK 234
>gi|321460681|gb|EFX71721.1| hypothetical protein DAPPUDRAFT_189103 [Daphnia pulex]
Length = 256
Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats.
Identities = 85/230 (36%), Positives = 126/230 (54%), Gaps = 3/230 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IMDGN R+A G+ + GH KG + E++ +GIK +T++AFS
Sbjct: 20 LKCGAIPKHIAFIMDGNRRFANKCGVKKIEGHSKGFDKLTEVLQWCLLLGIKEVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N+RR E+ +L+ L + K+ L ++ I +RVIGN L D+ ++ E+
Sbjct: 80 IENFRRSQEEVDQLMSLAREKFKRLLEEKDKLNEHGIGIRVIGNMALLPTDLQKLVVESM 139
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ T+LNT L IAF+Y+SR+E++ AI + + + D+D LI K L T
Sbjct: 140 ESTKLNTKAILNIAFSYTSREEMTHAISEVAWGVHEDLLKIEDIDEDLIQKCLYTRHSLQ 199
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
PDL+IR+ GE RLSDFLLWQ F P WP+F+ A+ Y
Sbjct: 200 PDLLIRSSGEVRLSDFLLWQTTCCTLYFTPVLWPEFTIWDLSKAILHYQK 249
>gi|283458098|ref|YP_003362712.1| undecaprenyl pyrophosphate synthase [Rothia mucilaginosa DY-18]
gi|283134127|dbj|BAI64892.1| undecaprenyl pyrophosphate synthase [Rothia mucilaginosa DY-18]
Length = 263
Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats.
Identities = 91/227 (40%), Positives = 135/227 (59%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ ++MDGNGRWA RGLPR GHR G ++VA A E+GI +T +AFS NW+R
Sbjct: 28 QHVAVVMDGNGRWANERGLPRTEGHRAGEAALLDVVAGAIEMGIPYVTAYAFSTENWKRS 87
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE++ +++ L++ +LK +++R G R L +++ L+ E +T NT
Sbjct: 88 PSEVAFIMRFSTEVLQRQLETLKTWGVRIRWAGRRPKLWKNVIEELEHCERETIDNTVCT 147
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L + NY R EI+ A I D +G + ++ I KYLD D+PD DL +R+ GE
Sbjct: 148 LTMCVNYGGRAEIADAAAAIAADAVAGKIKPGNITEKTIQKYLDEPDLPDVDLFLRSSGE 207
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+R+S+FLLWQ AY+E +F+ WPD R + A+ +Y RDRR+GG
Sbjct: 208 QRISNFLLWQSAYAEMIFMNVLWPDVDRRTLWEAVEEYARRDRRYGG 254
>gi|297202102|ref|ZP_06919499.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sviceus
ATCC 29083]
gi|197713537|gb|EDY57571.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sviceus
ATCC 29083]
Length = 257
Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats.
Identities = 83/238 (34%), Positives = 127/238 (53%), Gaps = 7/238 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HIG+I+DG+ RWA A G GHR G E E + +E ++ +T++ S
Sbjct: 23 LDHAQVPKHIGVIVDGSRRWAKAAGSTPVDGHRAGAEKIEEFLGWCSETDVEVVTLWLLS 82
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
+N+ RP E+ L+ +I+ ++ +V +G L + LKEAE+ T
Sbjct: 83 TDNFNRPPEELGPLLGIIEDVVRTL---AADGRWRVHHVGTPDLLPAPMQTALKEAEEST 139
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSDVP 180
G+ + +A Y R EI+ A++++ D + VD +I ++L T D P
Sbjct: 140 AHVDGILVNVAIGYGGRQEIADAVRSMLLDAHDKGTSMEELAEAVDIDMIGRHLYTGDQP 199
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DPDL+IRT GE+RLS F+LWQ A+SE+ F +WP F + F AL Y R RR+GG
Sbjct: 200 DPDLVIRTSGEQRLSGFMLWQTAHSEYYFCEVFWPAFRKVDFLRALRDYAARHRRYGG 257
>gi|258652080|ref|YP_003201236.1| undecaprenyl diphosphate synthase [Nakamurella multipartita DSM
44233]
gi|258555305|gb|ACV78247.1| undecaprenyl diphosphate synthase [Nakamurella multipartita DSM
44233]
Length = 273
Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats.
Identities = 90/236 (38%), Positives = 135/236 (57%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ + + P H+ ++MDGNGRWA RGLPR GH++G ++V A E+G+ +L+ +AF
Sbjct: 22 ALPAGAVPRHVALVMDGNGRWAKQRGLPRTEGHKRGEAALFDVVEGAIEIGVTHLSAYAF 81
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + +++ + ++VR G R L ++ L+ AE
Sbjct: 82 STENWKRSPDEVRFLMGFNRDVIRRRRDDMHALGVRVRWAGRRPRLWRSVIKELEVAEQL 141
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T N L L + NY R EI+ A K I + +G + + VD L A+YLD D+PD D
Sbjct: 142 TAGNRVLTLTMCVNYGGRAEIADAAKAIAIEAAAGRLDPNKVDERLFARYLDEPDMPDVD 201
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+ +R GE R S+FLLWQ AY+E VF +PDF R + A +Y R RRFGG+
Sbjct: 202 MFLRPSGELRTSNFLLWQSAYAELVFQDTLYPDFDRRDLWRACQEYASRQRRFGGV 257
>gi|302542839|ref|ZP_07295181.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces
hygroscopicus ATCC 53653]
gi|302460457|gb|EFL23550.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces
himastatinicus ATCC 53653]
Length = 253
Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats.
Identities = 85/239 (35%), Positives = 126/239 (52%), Gaps = 7/239 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ P HIG+I+DGN RWA A G GH+ G E++ +E ++ +T++
Sbjct: 17 GRLDHDQVPKHIGVILDGNRRWARASGGTTEQGHKAGASKIQEMLGWCSETDVEVVTLWM 76
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
S +N RP E+ L+ +I+ ++ +V +GNR L VLKEAE
Sbjct: 77 LSTDNLDRPEEELKPLLSIIEGAVR---DLASDGRWRVHHVGNRDLLPSGTQAVLKEAER 133
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSD 178
T G+ + +A Y R EI+ A++++ D + + VD LIA++L T
Sbjct: 134 DTEHIDGILVNVAVGYGGRQEIADAVRSLLLDHATKGTSFEELAEVVDIDLIAEHLYTRG 193
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDPDL+IRT GE+RLS F+LWQ A+SE+ F +WP F + F AL Y R RR+G
Sbjct: 194 QPDPDLVIRTSGEQRLSGFMLWQSAHSEYYFCEVFWPAFRKVDFLRALRDYAARHRRYG 252
>gi|116669734|ref|YP_830667.1| undecaprenyl pyrophosphate synthetase [Arthrobacter sp. FB24]
gi|116609843|gb|ABK02567.1| Undecaprenyl pyrophosphate synthetase [Arthrobacter sp. FB24]
Length = 253
Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats.
Identities = 81/241 (33%), Positives = 124/241 (51%), Gaps = 7/241 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ S+ P HIG+++DGN RWA P GH+ G + +E + E+GIK +T+
Sbjct: 15 LLRSLDKDRIPKHIGVMVDGNRRWAKQFNAPTSQGHQAGADKIHEFLGWCQELGIKVVTL 74
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N R E+ L+ +I + L + +I V +G L D + L +
Sbjct: 75 YMLSTDNMSRSGEELDLLMGIIANTLDRLDEDA---DISVHAMGAPELLPDYLAERLNKL 131
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI----ESGSVCSHDVDSSLIAKYLDT 176
+T + L++ +A Y R EI A++ + D + + ++ I+++L T
Sbjct: 132 TARTPAHEKLHVNVAVGYGGRREIVDAVRELLHDAVARGKDIGKLADELSVDDISRFLYT 191
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
PDPDL+IRT GE+RLS FL+WQ AYSEF F WP F + F AL Y R RRF
Sbjct: 192 RGQPDPDLVIRTSGEQRLSGFLMWQSAYSEFYFCEALWPAFRKVDFLRALRDYAGRQRRF 251
Query: 237 G 237
G
Sbjct: 252 G 252
>gi|296207139|ref|XP_002750512.1| PREDICTED: dehydrodolichyl diphosphate synthase isoform 1
[Callithrix jacchus]
Length = 334
Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats.
Identities = 81/229 (35%), Positives = 127/229 (55%), Gaps = 3/229 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IMDGN R+A + R GH +G E + +GI +T++AFS
Sbjct: 20 IKAGPVPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSF---LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R SE+ L+ L + L + L+K+ + +RV+G+ L D+ ++ +A
Sbjct: 80 IENFKRSKSEVDGLMDLARQKFSRLMEEQEKLQKHGVCIRVLGDLHLLPLDLQELIAQAV 139
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T+ L + F Y+SR EIS A++ + +E G + D+ SL+ K L T+ P
Sbjct: 140 QATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDISESLLDKCLYTNRSPH 199
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
PD++IRT GE RLSDFLLWQ ++S VF P WP+++ F A+ Q+
Sbjct: 200 PDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQ 248
>gi|120404780|ref|YP_954609.1| undecaprenyl diphosphate synthase [Mycobacterium vanbaalenii PYR-1]
gi|119957598|gb|ABM14603.1| Undecaprenyl pyrophosphate synthetase [Mycobacterium vanbaalenii
PYR-1]
Length = 231
Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats.
Identities = 86/229 (37%), Positives = 131/229 (57%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P+H+ ++MDGNGRWA RGL R GH+ G V +I A E+GIK+LT++AFS NW+
Sbjct: 1 MPNHVAVVMDGNGRWATQRGLGRTEGHKMGEAVLIDITCGAIEIGIKHLTVYAFSTENWK 60
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ L+ + +++ +L +++R +G+R + ++ AE T N
Sbjct: 61 RSTEEVRFLMGFNREVVRRRRENLNDMGVRMRWVGSRPRMWRSVIKEFDIAEQMTVDNDV 120
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ + NY R EI A + + Q G + + + AK+L +D+PD DL IRT
Sbjct: 121 ITINYCVNYGGRTEIVEAARELAQQAVDGKINPARITEATFAKHLHRADIPDVDLFIRTS 180
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GE+R S+FLLWQ AY+E+VF + WPD+ R + A +Y R+RRFG
Sbjct: 181 GEQRASNFLLWQAAYAEYVFQDKLWPDYDRRDLWAACEEYVNRNRRFGR 229
>gi|295698559|ref|YP_003603214.1| undecaprenyl diphosphate synthase [Candidatus Riesia pediculicola
USDA]
gi|291157479|gb|ADD79924.1| undecaprenyl diphosphate synthase [Candidatus Riesia pediculicola
USDA]
Length = 252
Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats.
Identities = 97/228 (42%), Positives = 134/228 (58%), Gaps = 1/228 (0%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ IIMDGN RWA G GH G+ + + A I +LT+FAFS NW R
Sbjct: 17 PKHVAIIMDGNRRWAKRNGKSTIQGHIAGVTSAQKAIKYALNNNIVSLTLFAFSKENWNR 76
Query: 71 PVSEISELVKLIKSFL-KKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
EIS L++L FL KK F K +NI++ +IG I ++ + T+ N
Sbjct: 77 SEKEISSLIRLFSFFLGKKTFERFKIHNIRLFIIGEINQFGKSIQKKVQNIVNLTKNNIK 136
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
LNL IA NYS R +I R+IK I + ++ GS+ D+ I +++ +D PD DL+IRTG
Sbjct: 137 LNLNIAVNYSGRWDILRSIKTIIKKVQEGSILIEDIREHTINRFICLNDQPDVDLVIRTG 196
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E R+S+FLLWQ+AYSE F WPDF+ E+F A+ +N+R+RRFG
Sbjct: 197 REYRISNFLLWQIAYSELYFTDILWPDFTEEVFQEAITNFNMRERRFG 244
>gi|262201612|ref|YP_003272820.1| undecaprenyl diphosphate synthase [Gordonia bronchialis DSM 43247]
gi|262084959|gb|ACY20927.1| undecaprenyl diphosphate synthase [Gordonia bronchialis DSM 43247]
Length = 260
Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats.
Identities = 85/243 (34%), Positives = 125/243 (51%), Gaps = 7/243 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLT 59
++ M + P H+ II DGN RWA G GHR G + +++ A++GI +T
Sbjct: 20 LIQLMDMARIPRHVAIICDGNRRWAREAGFEDVSHGHRVGAQRIADMLGWCADLGIGAVT 79
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
I+ S N R E+ L++++ + + S +VR++G +L + L+
Sbjct: 80 IYLLSTENLSRESDELDALMEIVPDIVDE--ISAPDGQWRVRIVGTLDNLPGVVADRLRA 137
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCS----HDVDSSLIAKYLD 175
A D+TR G+N+ +A Y R EI A++ + ++ + V I L
Sbjct: 138 ASDRTRGRDGMNVNVAVGYGGRQEIVDAVRALLEERLTAGATPAEMIDAVTVEAIDANLY 197
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
T PDPDL+IRT GE+RLS FLLWQ AYSE F YWP+F R F AL Y+ R+RR
Sbjct: 198 TKGQPDPDLVIRTSGEQRLSGFLLWQSAYSEIWFTDAYWPEFRRVDFLRALRDYSARNRR 257
Query: 236 FGG 238
FG
Sbjct: 258 FGK 260
>gi|239979665|ref|ZP_04702189.1| putative undecaprenyl diphosphate synthase [Streptomyces albus
J1074]
gi|291451530|ref|ZP_06590920.1| undecaprenyl pyrophosphate synthetase 1 [Streptomyces albus J1074]
gi|291354479|gb|EFE81381.1| undecaprenyl pyrophosphate synthetase 1 [Streptomyces albus J1074]
Length = 253
Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats.
Identities = 86/240 (35%), Positives = 129/240 (53%), Gaps = 7/240 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ P HIG+I+DGN RWA A G GHR G + E + AE ++ +T++
Sbjct: 17 GRLDHDQVPGHIGVILDGNRRWAKASGGTTAQGHRAGADKITEFLGWCAETKVRVVTLWM 76
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
S +N+ RP SE++ L+ +I+ ++ +V +G L D VLKEAE+
Sbjct: 77 LSTDNFDRPESELTPLLGIIEDSVRGL---AADGRWRVHHVGTLDMLPDRTRTVLKEAEE 133
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDS----SLIAKYLDTSD 178
T N G+ + +A Y R EI+ A++++ D ++ I+++L T
Sbjct: 134 ATAANQGILVNVAVGYGGRQEIADAVRSLLLDHAERGTSFEELAETVSIDSISEHLYTRG 193
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PDPDL+IRT GE+RLS F+LWQ A+SE+ F +WP F + F AL Y R+RRFGG
Sbjct: 194 QPDPDLVIRTSGEQRLSGFMLWQSAHSEYYFCEVFWPAFRKVDFLRALRDYAYRNRRFGG 253
>gi|150402515|ref|YP_001329809.1| undecaprenyl diphosphate synthase [Methanococcus maripaludis C7]
gi|150033545|gb|ABR65658.1| undecaprenyl diphosphate synthase [Methanococcus maripaludis C7]
Length = 264
Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats.
Identities = 81/242 (33%), Positives = 131/242 (54%), Gaps = 4/242 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + P H+GIIMDGN R A G GH G +E++ +GI +T+
Sbjct: 23 LESKISKYPLPKHVGIIMDGNRRLAKKLGENPELGHNLGASKVHEVINWCVSLGIHTVTL 82
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFS+ N+ RP +E+ L+ L + + + K+ I+V VIG R L + + +
Sbjct: 83 YAFSLENFNRPENEVKVLMDLFEKEFIEIADHPGVHKDKIRVSVIGRREMLPEYVQKAIM 142
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
AE++T+ + + A Y + EI ++K I + ++ + D+ LI+K L TS+
Sbjct: 143 YAEEKTKDYSDHFVNFAIAYGGQQEIIDSVKKIAEKVKDNEIEIEDITIELISKNLYTSN 202
Query: 179 V--PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
+ P+PDLIIRT GE+R+S+FL WQ YSE F YWP F + ++ +Y R+RR+
Sbjct: 203 LPSPNPDLIIRTSGEERISNFLTWQSCYSELYFCETYWPTFRKVDLLRSIREYQKRERRY 262
Query: 237 GG 238
G
Sbjct: 263 GK 264
>gi|326381834|ref|ZP_08203527.1| undecaprenyl diphosphate synthase [Gordonia neofelifaecis NRRL
B-59395]
gi|326199260|gb|EGD56441.1| undecaprenyl diphosphate synthase [Gordonia neofelifaecis NRRL
B-59395]
Length = 260
Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats.
Identities = 83/243 (34%), Positives = 123/243 (50%), Gaps = 7/243 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLT 59
+V M P H+ II DGN RWA G GHR G + +++ +E+GI+ +T
Sbjct: 20 LVQLMDPERIPRHVAIICDGNRRWAREAGFEDVSHGHRVGAQRIADMLGWCSELGIEAVT 79
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
I+ S N R E+ L++++ + + S + +VR++GN L + L+E
Sbjct: 80 IYLLSTENLTRESDELDALMEIVPDIVDE--ISDVDADWRVRIVGNLDQLPAPVAQRLRE 137
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLD 175
A +T + + +A Y R EI A++ + + + + I +L
Sbjct: 138 ASSRTEGAADMTVNVAVGYGGRQEIVDAVQQLLVEAVEAGASREEMVRAISVEGIDSHLY 197
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
TS PDPDL+IRT GE+RLS FLLWQ AYSE F YWP+F R F AL + R+RR
Sbjct: 198 TSGTPDPDLVIRTSGEQRLSGFLLWQSAYSEIWFTDAYWPEFRRVDFLRALRDFAARNRR 257
Query: 236 FGG 238
FG
Sbjct: 258 FGK 260
>gi|325284097|ref|YP_004256638.1| Undecaprenyl pyrophosphate synthase [Deinococcus proteolyticus MRP]
gi|324315906|gb|ADY27021.1| Undecaprenyl pyrophosphate synthase [Deinococcus proteolyticus MRP]
Length = 286
Score = 255 bits (651), Expect = 5e-66, Method: Composition-based stats.
Identities = 89/237 (37%), Positives = 131/237 (55%), Gaps = 6/237 (2%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+ P H+G+I+DGN R+A A GL R GH G + +E++ E+GI +TI+ S +N
Sbjct: 50 GTVPQHLGLILDGNRRFARAAGLQREMGHSIGADKAHEVLEWCLELGIPAVTIWVLSTDN 109
Query: 68 WRRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
R E+ ++ L++ + + +N +KV+VIG S D+L LK E+ T
Sbjct: 110 AGRDPDELGHILGLLRREATQLAVDPRIHRNRVKVQVIGQHDSFPPDVLRALKNLEESTA 169
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLDTSDVPD 181
+ G+ L IA Y R+EI A+K ++ + +V S+ I+++L T+ +PD
Sbjct: 170 HHDGMRLNIAVGYGGREEIVNAVKCHLREQAAQGRTLEEVAAGLHSADISRHLYTAGIPD 229
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PD IIRT GE RLS F+LWQ YSE+ F YWP F R F AL + R RRFG
Sbjct: 230 PDFIIRTSGEVRLSGFMLWQSVYSEYYFCDVYWPGFRRVDFLRALRDFQGRSRRFGR 286
>gi|90082170|dbj|BAE90366.1| unnamed protein product [Macaca fascicularis]
Length = 279
Score = 255 bits (651), Expect = 5e-66, Method: Composition-based stats.
Identities = 81/229 (35%), Positives = 127/229 (55%), Gaps = 3/229 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IMDGN R+A + R GH +G E + +GI +T++AFS
Sbjct: 20 IKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSF---LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R SE+ L+ L + L + L+K+ + +RV+G+ L D+ ++ +A
Sbjct: 80 IENFKRSKSEVDGLMDLARQKFSRLMEEQEKLQKHGVCIRVLGDLHLLPLDLQELIAQAV 139
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T+ L + F Y+SR EIS A++ + +E G + D+ SL+ K L T+ P
Sbjct: 140 QATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDISESLLDKCLYTNRSPH 199
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
PD++IRT GE RLSDFLLWQ ++S VF P WP+++ F A+ Q+
Sbjct: 200 PDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQ 248
>gi|257458507|ref|ZP_05623644.1| di-trans,poly-cis-decaprenylcistransferase [Treponema vincentii
ATCC 35580]
gi|257444104|gb|EEV19210.1| di-trans,poly-cis-decaprenylcistransferase [Treponema vincentii
ATCC 35580]
Length = 224
Score = 255 bits (651), Expect = 5e-66, Method: Composition-based stats.
Identities = 95/228 (41%), Positives = 130/228 (57%), Gaps = 6/228 (2%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
HI +IMDGNGRWA RGL R GH++G+E IV A +++ I +T++ FS NW+R
Sbjct: 2 QHIAVIMDGNGRWAEQRGLARTKGHQEGLEAAKRIVKAVSDLHIPYITLYVFSTENWKRT 61
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E+ L+ LI+ L+ NNIKV+ IGN +L I + + ++T TG
Sbjct: 62 EEEVGFLMGLIQKHLRAELAFYAANNIKVKHIGNAAALPRAIQTEIADIMEKTEHYTGTT 121
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+ +A NY +DEI RA+K + + + K LDT+ VP DL+IRTGGE
Sbjct: 122 VQLAINYGGKDEIIRAVKKLSRQQ------LETLTEDAFEKLLDTAGVPPADLVIRTGGE 175
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
KRLS+FLLWQ AY+EF WPDF+ AL+ Y R RRFG +
Sbjct: 176 KRLSNFLLWQTAYAEFYSTDVLWPDFAPAHLMEALDAYGKRTRRFGRI 223
>gi|148236869|ref|NP_001082651.1| dehydrodolichyl diphosphate synthase [Xenopus laevis]
gi|47937543|gb|AAH72115.1| LOC398626 protein [Xenopus laevis]
gi|76779715|gb|AAI06302.1| LOC398626 protein [Xenopus laevis]
Length = 332
Score = 255 bits (651), Expect = 5e-66, Method: Composition-based stats.
Identities = 83/234 (35%), Positives = 133/234 (56%), Gaps = 4/234 (1%)
Query: 1 MVASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ A+++ + P P H+ IMDGN R+A + R GH +G E E + +GI +T
Sbjct: 15 LCANVLKAGPIPKHVAFIMDGNRRYAQKCHVERQEGHSQGFEKLAETLRWCLNLGICEVT 74
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKK---GFYSLKKNNIKVRVIGNRLSLDDDILCV 116
++AFSI N++R E+ L++L + + L+K+ + +RV+G+ L DI +
Sbjct: 75 VYAFSIENFKRSAEEVEGLMELARQKFTRLLEEREKLEKHGVCIRVLGDLTLLPLDIQKL 134
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT 176
+ +A +T+ + L + F+Y+SR EIS AI+ ++ G + DV SL+ + L T
Sbjct: 135 IAQAMLETKAYSKCFLNVCFSYTSRHEISNAIREAAWGVQEGLLDPRDVTESLLDQCLYT 194
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
S P+PDL+IRT GE RLSDFLLWQ +YS VF WP+++ A+ +Y
Sbjct: 195 SKSPEPDLLIRTSGEVRLSDFLLWQTSYSCLVFQSVLWPEYTFWNLCEAVLRYQ 248
>gi|254785178|ref|YP_003072606.1| di-trans,poly-cis-decaprenylcistransferase [Teredinibacter turnerae
T7901]
gi|237683810|gb|ACR11074.1| di-trans,poly-cis-decaprenylcistransferase [Teredinibacter turnerae
T7901]
Length = 250
Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats.
Identities = 92/241 (38%), Positives = 134/241 (55%), Gaps = 1/241 (0%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
V + S++P H+ IIMDGN RWA RG GHR G+E +++ A E G+ LT+F
Sbjct: 3 VNPIESANPLRHVAIIMDGNNRWAEQRGRQGITGHRAGVERIRDVLRACREEGVDALTLF 62
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NWRRP E+ L+ L ++LKK L + + +RVIGNR +L ++EAE
Sbjct: 63 AFSSENWRRPPKEVEALMGLFYNYLKKEARKLAEEGVAIRVIGNRARFSKKLLSAIEEAE 122
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ L IA +Y +I+++ K++ +D +G + D+ I + TS +P
Sbjct: 123 SI-ASSGEATLIIAADYGGCWDITQSAKSLAEDAIAGRISLDDITEQAIGSRISTSSLPP 181
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRTGGE R+S+FLLWQ AY+E F WP+F A+ + R RRFG
Sbjct: 182 LDLLIRTGGEYRISNFLLWQAAYAELYFSELLWPEFDGVAMKTAIEDFRRRQRRFGKTGA 241
Query: 242 K 242
+
Sbjct: 242 Q 242
>gi|330836660|ref|YP_004411301.1| Undecaprenyl pyrophosphate synthetase [Spirochaeta coccoides DSM
17374]
gi|329748563|gb|AEC01919.1| Undecaprenyl pyrophosphate synthetase [Spirochaeta coccoides DSM
17374]
Length = 239
Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats.
Identities = 93/240 (38%), Positives = 139/240 (57%), Gaps = 2/240 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M+ + +SS P H+G IMDGNGRWA R LPR AGH +G++ ++ AAA+ GI+ +T+
Sbjct: 1 MLDTTVSSIIPTHVGFIMDGNGRWAQKRALPRVAGHLEGLKACRRVIIAAAKQGIRYVTL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW+RP E+S L+ ++ S + + ++I++ V G+ L L+
Sbjct: 61 YVFSTENWKRPAQEVSYLMGMLVSKIHGELNFYRTHDIRILVRGDISQLPQASREALEAT 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+T G+ +A NY RDEI R+I++ C DV LI+ L VP
Sbjct: 121 IRETASAKGMTCVLAINYGGRDEIVRSIRDCL--KTGRISCPEDVTEELISTSLTLPSVP 178
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPD+++R+ GEKRLS+FLLWQ+AY+E F + WPD+ E + + R RR+GGLS
Sbjct: 179 DPDIVVRSAGEKRLSNFLLWQIAYAELAFYDKLWPDWDSEDVKKLCDDFASRTRRYGGLS 238
>gi|296284730|ref|ZP_06862728.1| undecaprenyl pyrophosphate synthase [Citromicrobium bathyomarinum
JL354]
Length = 226
Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats.
Identities = 92/234 (39%), Positives = 147/234 (62%), Gaps = 9/234 (3%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M + H+ IIMDGNGRWA RGLPR GH++G+E ++V + GI+ LT++AFS
Sbjct: 1 MPEENQARHVAIIMDGNGRWAKRRGLPRAMGHKRGVEAVRKLVRSLEGTGIECLTLYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+S+L+ L++SF++ N ++++++G+ +LD DI+ +L++A ++T
Sbjct: 61 SENWKRPEEEVSDLMNLMRSFIRSDLEEFVANGVRLKIVGDWRALDPDIVAMLEDALERT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
T + +A NY S+ EI+ A + ++ + + I +L T+D+P DL
Sbjct: 121 AGGTH-TVAVALNYGSQQEIAGAARAAAKEGK--------ITPEAIEHHLFTADLPPVDL 171
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+IRT GE RLS+FLLWQ+AY+E +F+ WPDF E AL+ + R+RR+GG
Sbjct: 172 LIRTSGEVRLSNFLLWQMAYAEMIFVDTLWPDFGPEDLRKALDVFAKRERRYGG 225
>gi|119962556|ref|YP_947074.1| undecaprenyl diphosphate synthase [Arthrobacter aurescens TC1]
gi|119949415|gb|ABM08326.1| undecaprenyl diphosphate synthase [Arthrobacter aurescens TC1]
Length = 268
Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats.
Identities = 81/241 (33%), Positives = 126/241 (52%), Gaps = 7/241 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ S+ P HIG+++DGN RWA P GH+ G + +E + E+G+K +T+
Sbjct: 30 LLRSLKQDRIPRHIGVMVDGNRRWARQFNAPTSQGHQAGADKIHEFLGWCQELGVKVVTL 89
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N R E+ L+ +I + + + ++ V +G L D + L +
Sbjct: 90 YMLSTDNMSRSGEELDLLMGIIANTMDRLDE---DEDVSVHAMGAPELLPDYLAERLNKL 146
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDT 176
+T ++ +++ +A Y R EI A++ + D ++ DV L I+K+L T
Sbjct: 147 TARTPVHEKIHVNVAVGYGGRREIVDAVRELLHDADAKGRKMSDVADELSVDDISKFLYT 206
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
PDPDL+IRT GE+RLS FL+WQ AYSEF F WP F + F AL Y R RRF
Sbjct: 207 RGQPDPDLVIRTSGEQRLSGFLMWQSAYSEFYFCEALWPAFRKVDFLRALRDYAGRQRRF 266
Query: 237 G 237
G
Sbjct: 267 G 267
>gi|255327482|ref|ZP_05368549.1| di-trans,poly-cis-decaprenylcistransferase [Rothia mucilaginosa
ATCC 25296]
gi|255295376|gb|EET74726.1| di-trans,poly-cis-decaprenylcistransferase [Rothia mucilaginosa
ATCC 25296]
Length = 263
Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats.
Identities = 91/227 (40%), Positives = 135/227 (59%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ ++MDGNGRWA RGLPR GHR G ++VA A E+GI +T +AFS NW+R
Sbjct: 28 QHVAVVMDGNGRWANERGLPRTEGHRAGEAALLDVVAGAIEMGIPYVTAYAFSTENWKRS 87
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE++ +++ L++ +LK +++R G R L +++ L+ E +T NT
Sbjct: 88 PSEVAFIMRFSTEVLQRQLATLKTWGVRIRWAGRRPKLWKNVIEELEHCERETIDNTVCT 147
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L + NY R EI+ A I D +G + ++ I KYLD D+PD DL +R+ GE
Sbjct: 148 LTMCVNYGGRAEIADAAAAIAADAVAGKLKPGNITEKTIQKYLDEPDLPDVDLFLRSSGE 207
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+R+S+FLLWQ AY+E +F+ WPD R + A+ +Y RDRR+GG
Sbjct: 208 QRISNFLLWQSAYAEMIFMNVLWPDVDRRTLWEAVEEYARRDRRYGG 254
>gi|255525479|ref|ZP_05392416.1| undecaprenyl diphosphate synthase [Clostridium carboxidivorans P7]
gi|296188587|ref|ZP_06856975.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium
carboxidivorans P7]
gi|255510844|gb|EET87147.1| undecaprenyl diphosphate synthase [Clostridium carboxidivorans P7]
gi|296046851|gb|EFG86297.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium
carboxidivorans P7]
Length = 239
Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats.
Identities = 91/222 (40%), Positives = 132/222 (59%), Gaps = 1/222 (0%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HI II DGNGRWA +GLPR GH+ G + I A +E+G++ LT + FS NW
Sbjct: 15 KIPKHIAIICDGNGRWAKEKGLPRYLGHKAGTDPIKTITKACSELGVEVLTFYVFSTENW 74
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
R E++ L+ L F K + K N+KV+ IGN SL ++ +K+ E T N+
Sbjct: 75 NRSKQEVNFLMNLFIEFFIKLQNEVGK-NVKVKHIGNMDSLSSKLINEIKKTEKLTENNS 133
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
G+ L +A NY SR E++ A+K+I D+ + ++ + +D +LI Y+ TS +PD DLIIRT
Sbjct: 134 GMVLNVALNYGSRSEMTNAVKSIISDMNNENLRNDKIDETLINSYMYTSGLPDVDLIIRT 193
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
GE+R+S+FLLWQ A ++ +WPDF A+ YN
Sbjct: 194 SGERRISNFLLWQSAKAKLWITKYFWPDFKIGHLNEAIKFYN 235
>gi|54113225|gb|AAV29246.1| NT02FT0090 [synthetic construct]
Length = 257
Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats.
Identities = 93/236 (39%), Positives = 140/236 (59%), Gaps = 1/236 (0%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ H+ IIMDGNGRWA +R PR GHR + + + E I+ LT+FAF +
Sbjct: 22 KENILRHLAIIMDGNGRWAKSRLKPRIFGHRNSVSSVDATIEYCVENNIEMLTLFAFGRD 81
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP E+S+L+ L LK L NNI V V+G+R L + ++ +++ +E T+
Sbjct: 82 NWLRPAQEVSDLMDLFYKTLKDKTPKLHDNNIVVTVVGDRSRLSNKLIGMIEYSESLTKS 141
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NTGL L +A +Y+ R +I A + I ++++ G + ++D + AKYL ++P DL+I
Sbjct: 142 NTGLKLRLAVDYAGRWDIVEATRAIAREVDIGKLSVDEIDQNSFAKYLVGGNMP-VDLLI 200
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE RLSDF+LWQ+AY+E F WPDFS++ A+ + R RRFG ++
Sbjct: 201 RTSGEVRLSDFMLWQLAYAEMYFTDIMWPDFSKQELTRAVEYFYSRQRRFGNSGEQ 256
>gi|110834008|ref|YP_692867.1| undecaprenyl diphosphate synthase [Alcanivorax borkumensis SK2]
gi|110647119|emb|CAL16595.1| undecaprenyl diphosphate synthase [Alcanivorax borkumensis SK2]
Length = 260
Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats.
Identities = 93/236 (39%), Positives = 135/236 (57%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
P H+ IIMDGN RWA G+P GHR G I+ AA+ G++ LT+FAFS
Sbjct: 17 QGVVPRHVAIIMDGNNRWARKHGVPGEEGHRAGEATVQAIIRQAAQRGLEALTLFAFSSE 76
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP +E+ L+ L L L + +++R IG+R + + + +AE T
Sbjct: 77 NWRRPQAEVDHLMALFLKALAGRVEELHSHEVRIRFIGDRGAFSQGLQDGMTQAEVLTGN 136
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NT + + IA NY + +I+ A + + + G + +D+ +A YL +D+P PDL+I
Sbjct: 137 NTRMTVVIAVNYGGQWDIAHAARQLAAKVAEGEMEVDQIDAGAMAPYLSMADLPPPDLLI 196
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RTGG++R+S+FLLWQ+AYSE F P WPDF + F AL Y R RRFG ++
Sbjct: 197 RTGGDQRISNFLLWQLAYSELFFSPLLWPDFDADAFDAALQDYAGRQRRFGRSGEE 252
>gi|302339358|ref|YP_003804564.1| undecaprenyl diphosphate synthase [Spirochaeta smaragdinae DSM
11293]
gi|301636543|gb|ADK81970.1| undecaprenyl diphosphate synthase [Spirochaeta smaragdinae DSM
11293]
Length = 238
Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats.
Identities = 94/232 (40%), Positives = 134/232 (57%), Gaps = 1/232 (0%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HIGIIMDGNGRWA RG PR GH+ G + +++ +A E+GI+ LT++ FS NW
Sbjct: 6 PIPKHIGIIMDGNGRWAERRGKPRSFGHKSGTDTAKKVITSAIEMGIEWLTLYVFSTENW 65
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP E+ L++LI+ ++K KN I++ +G+ L ++I + EA + T
Sbjct: 66 KRPEREVRFLMELIRRYMKSEAPFYHKNKIRLHHLGDPERLPEEIRREIVEASEATSHYD 125
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVC-SHDVDSSLIAKYLDTSDVPDPDLIIR 187
L+L +A NY RDEI R+ + S S + YLD + P PDLIIR
Sbjct: 126 RLHLALAINYGGRDEILRSFQRWVTATLEKGETISSAPTSEEFSTYLDLPEAPSPDLIIR 185
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
T GE+R+S+FLLW+ AYSE+ F WPDF E A+ Y R R++GG+
Sbjct: 186 TAGEQRMSNFLLWESAYSEYYFSEVLWPDFDGEELSKAIEFYRGRKRKYGGV 237
>gi|297527185|ref|YP_003669209.1| undecaprenyl diphosphate synthase [Staphylothermus hellenicus DSM
12710]
gi|297256101|gb|ADI32310.1| undecaprenyl diphosphate synthase [Staphylothermus hellenicus DSM
12710]
Length = 269
Score = 254 bits (650), Expect = 7e-66, Method: Composition-based stats.
Identities = 86/238 (36%), Positives = 130/238 (54%), Gaps = 3/238 (1%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P HIGII DGN RWA G GH G + + + E+ I+ +T++A
Sbjct: 32 QIKNGPFPAHIGIIPDGNRRWAKRSGFDPKQGHEYGYQRIKDALNWIWELNIRYVTLYAM 91
Query: 64 SINN-WRRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
S N RP+ E L ++K L++ + + I+++V G + DI+ + +
Sbjct: 92 SSENCLYRPLDERRHLFNIVKKGLQELINMPEIHEKKIQIKVFGRLELVPKDIVELAHKI 151
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E+QT+ L IA Y R EI A++ I +D +SG + ++D ++YL T+ P
Sbjct: 152 EEQTKHYKEYRLNIALCYGGRQEILEAVRKIVKDAQSGKINPENIDEETFSRYLYTNGCP 211
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DPDLIIRT GE R+S+FLLWQ AYSE F YWP+F + F+ A+ Y R+RR+G
Sbjct: 212 DPDLIIRTSGEVRISNFLLWQSAYSELYFCEAYWPEFRKIDFWRAIRSYQRRERRYGR 269
>gi|29829779|ref|NP_824413.1| undecaprenyl diphosphate synthase [Streptomyces avermitilis
MA-4680]
gi|42559954|sp|Q82IC1|UPPS1_STRAW RecName: Full=Undecaprenyl pyrophosphate synthase 1; Short=UPP
synthase 1; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase 1;
AltName: Full=Undecaprenyl diphosphate synthase 1;
Short=UDS 1
gi|29606888|dbj|BAC70948.1| putative undecaprenyl diphosphate synthase [Streptomyces
avermitilis MA-4680]
Length = 257
Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats.
Identities = 84/237 (35%), Positives = 123/237 (51%), Gaps = 7/237 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P HIG+IMDGN RWA A G GHR G + E + +E + +T++ S
Sbjct: 23 LDHDQVPKHIGVIMDGNRRWAKAAGSTTAQGHRAGADKIEEFLGWCSETDVGVVTLWLLS 82
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
+N+ RP E+ L+ +I+ ++ +V +G L + LKEAE+ T
Sbjct: 83 TDNFDRPQEELGPLLGIIEGVVRTL---AADGRWRVHHVGTPDILPSQMQNALKEAEETT 139
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVC----SHDVDSSLIAKYLDTSDVP 180
G+ + +A Y R EI+ A++++ D + VD LI K+L T P
Sbjct: 140 AHVDGILVNVAIGYGGRQEIADAVRSMLLDAHEKGTSIPDLADAVDVDLIGKHLYTGAQP 199
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DPDL+IRT GE+RLS F+LWQ A+SE+ F +WP F + F AL Y R RR+G
Sbjct: 200 DPDLVIRTSGEQRLSGFMLWQTAHSEYYFCEVFWPAFRKVDFLRALRDYAARHRRYG 256
>gi|32450651|gb|AAH54312.1| LOC398626 protein [Xenopus laevis]
Length = 333
Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats.
Identities = 81/229 (35%), Positives = 128/229 (55%), Gaps = 3/229 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P H+ IMDGN R+A + R GH +G E E + +GI +T++AFS
Sbjct: 21 LQAGPIPKHVAFIMDGNRRYAQKCHVERQEGHSQGFEKLAETLRWCLNLGICEVTVYAFS 80
Query: 65 INNWRRPVSEISELVKLIKSFLKK---GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R E+ L++L + + L+K+ + +RV+G+ L DI ++ +A
Sbjct: 81 IENFKRSAEEVEGLMELARQKFTRLLEEREKLEKHGVCIRVLGDLTLLPLDIQKLIAQAM 140
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T+ + L + F+Y+SR EIS AI+ ++ G + DV SL+ + L TS P+
Sbjct: 141 LETKAYSKCFLNVCFSYTSRHEISNAIREAAWGVQEGLLDPRDVTESLLDQCLYTSKSPE 200
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
PDL+IRT GE RLSDFLLWQ +YS VF WP+++ A+ +Y
Sbjct: 201 PDLLIRTSGEVRLSDFLLWQTSYSCLVFQSVLWPEYTFWNLCEAVLRYQ 249
>gi|308176542|ref|YP_003915948.1| di-trans,poly-cis-decaprenylcistransferase [Arthrobacter
arilaitensis Re117]
gi|307744005|emb|CBT74977.1| di-trans,poly-cis-decaprenylcistransferase [Arthrobacter
arilaitensis Re117]
Length = 253
Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats.
Identities = 89/241 (36%), Positives = 128/241 (53%), Gaps = 7/241 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ S+ + P HIG+++DGN RWA G P AGH+ G + E + ++ I+ +T+
Sbjct: 15 LAKSLPADKLPHHIGVMVDGNRRWAKLAGTPTMAGHQAGADKILEFLDWCEDLNIQMVTL 74
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N R SE+ +L+++I S L + + N +KV+ +G + L +D+ L
Sbjct: 75 YMLSTDNLNREASELRDLLEVIGSTLDRLGET---NRVKVQQVGAKDLLPEDLAQKLAAL 131
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDT 176
E T G+++ +A Y R EI A K + D ++ SSL I L T
Sbjct: 132 ETITANRDGVHVNVAIGYGGRREILDAFKALLCDAAKDGRTLEELASSLSTDDIESALYT 191
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
PDPDL+IRT GE+RLS FL WQ AYSEF F WPDF R F AL + R RRF
Sbjct: 192 KGQPDPDLVIRTSGEQRLSGFLTWQSAYSEFYFCEALWPDFRRVDFLRALRDFADRQRRF 251
Query: 237 G 237
G
Sbjct: 252 G 252
>gi|291277537|ref|YP_003517309.1| undecaprenyl pyrophosphate synthetase [Helicobacter mustelae 12198]
gi|290964731|emb|CBG40586.1| undecaprenyl pyrophosphate synthetase [Helicobacter mustelae 12198]
Length = 228
Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats.
Identities = 93/227 (40%), Positives = 134/227 (59%), Gaps = 4/227 (1%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA R PR GH+ G V EI A+ I LT++AFS NW+RP
Sbjct: 6 HLAIIMDGNGRWAKERKKPRKEGHKAGTNVVREITTWCAKNAITYLTLYAFSTENWKRPK 65
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+E+ L+KL+ +L+K + ++I + IGN + D + + E + T+ N L
Sbjct: 66 TEVRYLMKLLAQYLEKEKQTYLDHDICFKAIGNIEAFDLSLKEKIYELQSLTQNNKSLTQ 125
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A NY SRDEI+RA+K++ + ++ LDT +PD DL+IRTGGE+
Sbjct: 126 ILALNYGSRDEITRALKDLLLSPPQNLENLEEELNA----RLDTRGIPDVDLLIRTGGEQ 181
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
R+S+FLLWQ++Y+E F P YWP+FS + Y ++RRFGGL
Sbjct: 182 RISNFLLWQISYAELFFTPTYWPEFSTRELEQIIASYRQKNRRFGGL 228
>gi|149924398|ref|ZP_01912764.1| undecaprenyl diphosphate synthase [Plesiocystis pacifica SIR-1]
gi|149814741|gb|EDM74314.1| undecaprenyl diphosphate synthase [Plesiocystis pacifica SIR-1]
Length = 274
Score = 254 bits (649), Expect = 8e-66, Method: Composition-based stats.
Identities = 94/237 (39%), Positives = 138/237 (58%), Gaps = 1/237 (0%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
P H+GIIMDGNGRWAA RGL R GH KG + EIV A+ +G+ LT++AFS
Sbjct: 5 PKRLPRHVGIIMDGNGRWAAERGLRREQGHSKGADAVREIVRASRRIGLDALTLYAFSSQ 64
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP E+ L+ L++ +L + + N+I++ +G L +L L E + +
Sbjct: 65 NWARPPREVLHLMHLLRRYLIEERSEILDNDIRLVTVGEIERLPRMVLRPLAELMEASAD 124
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYL-DTSDVPDPDLI 185
N G+ L +A +Y R+ I+ A ++I + + G + +D LI Y+ +S +P DL+
Sbjct: 125 NRGMVLCLALSYGGRESIAAATRDIARAVARGDLDPEAIDPDLIGSYMPSSSMLPSLDLL 184
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRT GE+R+S+F LW+VAY+E F P WPDF + AL Y R+RRFG S +
Sbjct: 185 IRTSGERRVSNFFLWEVAYAELHFSPVLWPDFGETDLWSALRDYAGRERRFGMTSAQ 241
>gi|74316807|ref|YP_314547.1| undecaprenyl pyrophosphate synthetase [Thiobacillus denitrificans
ATCC 25259]
gi|74056302|gb|AAZ96742.1| di-trans-poly-cis-decaprenylcistransferase [Thiobacillus
denitrificans ATCC 25259]
Length = 245
Score = 254 bits (649), Expect = 8e-66, Method: Composition-based stats.
Identities = 101/237 (42%), Positives = 143/237 (60%), Gaps = 7/237 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
++S P HI IIMDGNGRWA R +PR AGHRKG+E ++ A AE G+ +LT+FAFS
Sbjct: 11 VTSDVPRHIAIIMDGNGRWAKRRFMPRFAGHRKGVEALRGVIRACAERGVTHLTVFAFSS 70
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NWRRP E++ L++L L+ L +N I+ RVIG+ + I +++EAE TR
Sbjct: 71 ENWRRPQEEVTLLMELFLRALENEVAKLHENGIRFRVIGDLSGFSERIQTLIREAETLTR 130
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N+ L +A NY R ++ +A+K + V + +A +L +D P+PDL
Sbjct: 131 DNSRLTFTVAANYGGRWDVVQAVKKLV-------ASGEPVSEAALAAHLSLADTPEPDLF 183
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
IRTGGE+R+S+FLLWQ+AY+E F WPDF A+ Y R+RRFG S++
Sbjct: 184 IRTGGEQRISNFLLWQLAYTELYFTDALWPDFDAAALDAAIASYRTRERRFGRTSEQ 240
>gi|283458638|ref|YP_003363273.1| undecaprenyl pyrophosphate synthase [Rothia mucilaginosa DY-18]
gi|283134688|dbj|BAI65453.1| undecaprenyl pyrophosphate synthase [Rothia mucilaginosa DY-18]
Length = 290
Score = 254 bits (649), Expect = 8e-66, Method: Composition-based stats.
Identities = 91/241 (37%), Positives = 131/241 (54%), Gaps = 7/241 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ S+ P HIG+++DGN RWAA RGL GH G E + +A E+ I +++
Sbjct: 52 LERSLSPEILPAHIGVLVDGNRRWAAQRGLSTREGHAAGAERIIDFLAWCTELSIPQVSL 111
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S+ N +RP E++ LV +I +FL + S VR IGN + + L A
Sbjct: 112 YMLSVENLKRPEQELTGLVAVIDNFLVRLVESACGP---VRAIGNIDLIPRQLHERLDWA 168
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDT 176
QT +G+ + IA Y R EI A++++ + + D ++ I+ +L T
Sbjct: 169 IAQTAHLSGVRVNIAVGYGGRQEIVDAVRSVLLEAAAKGTSLEDMADLLNVEDISSHLYT 228
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
+D+PDPDL+IRT GE+RLS F+ WQ AYSEF F WPDF+R F AL Y R RRF
Sbjct: 229 ADMPDPDLLIRTSGEQRLSGFMTWQSAYSEFYFCRALWPDFTRVDFLRALRDYANRSRRF 288
Query: 237 G 237
G
Sbjct: 289 G 289
>gi|239947288|ref|ZP_04699041.1| di-trans,poly-cis-decaprenylcistransferase [Rickettsia endosymbiont
of Ixodes scapularis]
gi|239921564|gb|EER21588.1| di-trans,poly-cis-decaprenylcistransferase [Rickettsia endosymbiont
of Ixodes scapularis]
Length = 249
Score = 254 bits (649), Expect = 8e-66, Method: Composition-based stats.
Identities = 84/227 (37%), Positives = 125/227 (55%), Gaps = 6/227 (2%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGN RWA L + GH+ G + E++ +G+ +T++ FS NW+R
Sbjct: 28 KHLAIIMDGNARWADRHNLTKSEGHKAGADKIRELLPEFINLGVPYVTLYTFSSENWQRS 87
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
+E+ L+KL+ +LK +L KN +K++VIG L + + A + T+ N +
Sbjct: 88 STEVDFLIKLLSIYLKNELNNLHKNGVKIKVIGRLNLLSSSLQKQINNAIELTKNNNKIT 147
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L IAF+Y SR EI A I + +V S I L ++PD DL+IR G
Sbjct: 148 LCIAFSYGSRQEIVDAYTKIIASGKK------EVSESDIQHALYDPEMPDVDLLIRPGEV 201
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R+S+FLLWQ AY+E F +YWPDF+++ A+N Y+ R R FG
Sbjct: 202 YRISNFLLWQAAYAELYFSSKYWPDFNKDDILEAINDYSKRKRTFGK 248
>gi|78365263|ref|NP_001030423.1| dehydrodolichyl diphosphate synthase isoform a [Bos taurus]
gi|61553431|gb|AAX46405.1| dehydrodolichyl diphosphate synthase isoform a [Bos taurus]
gi|296490002|gb|DAA32115.1| dehydrodolichyl diphosphate synthase isoform a [Bos taurus]
Length = 316
Score = 254 bits (649), Expect = 8e-66, Method: Composition-based stats.
Identities = 81/229 (35%), Positives = 126/229 (55%), Gaps = 3/229 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IMDGN R+A + R GH +G E + +GI +T++AFS
Sbjct: 20 IKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSF---LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R SE+ L+ L + L + L+K+ + +RV+G+ L D+ ++ +A
Sbjct: 80 IENFKRSKSEVDGLMDLAREKFSRLMEEQEKLQKHGVCIRVLGDLHLLPLDLQELVAQAV 139
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T+ L + F Y+SR EIS A++ + +E G + DV SL+ K L T+ P
Sbjct: 140 QTTKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDVSESLLDKCLYTNHSPH 199
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
PD++IRT GE RLSDFLLWQ ++S VF P WP+++ A+ Q+
Sbjct: 200 PDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLCEAILQFQ 248
>gi|27754093|ref|NP_080420.2| dehydrodolichyl diphosphate synthase [Mus musculus]
gi|46395956|sp|Q99KU1|DHDDS_MOUSE RecName: Full=Dehydrodolichyl diphosphate synthase; Short=Dedol-PP
synthase
gi|13278394|gb|AAH04011.1| Dhdds protein [Mus musculus]
gi|26340716|dbj|BAC34020.1| unnamed protein product [Mus musculus]
gi|74149270|dbj|BAE22416.1| unnamed protein product [Mus musculus]
gi|74222941|dbj|BAE42313.1| unnamed protein product [Mus musculus]
gi|74225950|dbj|BAE28748.1| unnamed protein product [Mus musculus]
gi|126540558|emb|CAM46103.1| dehydrodolichyl diphosphate synthase [Mus musculus]
gi|126541190|emb|CAM46080.1| dehydrodolichyl diphosphate synthase [Mus musculus]
gi|148698095|gb|EDL30042.1| dehydrodolichyl diphosphate synthase, isoform CRA_c [Mus musculus]
Length = 333
Score = 254 bits (649), Expect = 9e-66, Method: Composition-based stats.
Identities = 83/240 (34%), Positives = 128/240 (53%), Gaps = 6/240 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IMDGN R+A + R GH +G E + +GI +T++AFS
Sbjct: 20 IKAGPVPKHIAFIMDGNRRYAKKCQVERQEGHTQGFNKLAETLRWCLNLGILEVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKS---FLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R SE+ L+ L + L + L+K+ + +RV+G+ L D+ + A
Sbjct: 80 IENFKRSKSEVDGLLDLARQKFSCLMEEQEKLQKHGVCIRVLGDLHLLPLDLQEKIAHAI 139
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T+ L + F Y+SR EI+ A++ + +E G + DV SL+ K L ++ P
Sbjct: 140 QATKNYNKCFLNVCFAYTSRHEIANAVREMAWGVEQGLLEPSDVSESLLDKCLYSNHSPH 199
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PD++IRT GE RLSDFLLWQ ++S VF P WP+++ A+ Q+ R G L K
Sbjct: 200 PDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLCEAILQFQ---RNHGALQK 256
>gi|296271049|ref|YP_003653681.1| undecaprenyl diphosphate synthase [Thermobispora bispora DSM 43833]
gi|296093836|gb|ADG89788.1| undecaprenyl diphosphate synthase [Thermobispora bispora DSM 43833]
Length = 253
Score = 254 bits (648), Expect = 9e-66, Method: Composition-based stats.
Identities = 91/242 (37%), Positives = 133/242 (54%), Gaps = 9/242 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ + S+ P H+G+I+DGN RWA A GL GH+KG + +E++ EVG++ +T
Sbjct: 15 LERKLASAKIPRHVGVIVDGNRRWARAMGLSDVSRGHQKGADKISELLVWCKEVGVEIVT 74
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++ S +N RP SE+ L++ ++ L + +G L D VLK
Sbjct: 75 LWLLSTDNLGRPKSELESLLR----VIENLVMDLVAQGWHLNPMGALDLLPDHTARVLKY 130
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLD 175
A++ T GL + +A Y R EI+ A++++ Q+ S ++ D IAK+L
Sbjct: 131 AKEATSDRPGLIVNVAVGYGGRREIADAVRSLLQEHASKGATIEELAEILDVEHIAKHLY 190
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
T PDPDL+IRT GE+RLS FLLWQ A+SEF F YWPDF + F AL Y R RR
Sbjct: 191 TRGQPDPDLVIRTSGEQRLSGFLLWQSAHSEFYFCEAYWPDFRKVDFLRALRSYAARHRR 250
Query: 236 FG 237
+G
Sbjct: 251 YG 252
>gi|240849357|ref|NP_001155508.1| dehydrodolichyl diphosphate synthase-like [Acyrthosiphon pisum]
gi|239789978|dbj|BAH71580.1| ACYPI003077 [Acyrthosiphon pisum]
Length = 287
Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats.
Identities = 75/235 (31%), Positives = 124/235 (52%), Gaps = 3/235 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P H+ IMDGN R+A + + + GH +G + E + +GIK +T++AFS
Sbjct: 20 LTYGEIPKHVAFIMDGNRRYAKKKSVAKQEGHVRGFDKLAETLQWCLHLGIKEVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
++N++R EI L L + K+ L ++ + + +GN L DD++ ++ E+
Sbjct: 80 LDNFKRTQEEIDALFDLAREKFKRLLEEKDKLNEHGVCINFVGNIKKLPDDLIKLIAESM 139
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T+ N L +AF+Y+ DE++ A I I++ + D+ ++ + T P
Sbjct: 140 LITKQNNKAFLNVAFSYTGHDELTNAFNKISLGIKNNDLEESDLSVEILDNCMYTYPSPP 199
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
PDL+IRT GE RLSDF++WQ +YS F P WP+F+ F A+ Y R F
Sbjct: 200 PDLLIRTSGETRLSDFMIWQCSYSYIYFTPVLWPEFTAWDFMIAIFMYQSNFRAF 254
>gi|148698093|gb|EDL30040.1| dehydrodolichyl diphosphate synthase, isoform CRA_a [Mus musculus]
Length = 336
Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats.
Identities = 83/240 (34%), Positives = 128/240 (53%), Gaps = 6/240 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IMDGN R+A + R GH +G E + +GI +T++AFS
Sbjct: 23 IKAGPVPKHIAFIMDGNRRYAKKCQVERQEGHTQGFNKLAETLRWCLNLGILEVTVYAFS 82
Query: 65 INNWRRPVSEISELVKLIKS---FLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R SE+ L+ L + L + L+K+ + +RV+G+ L D+ + A
Sbjct: 83 IENFKRSKSEVDGLLDLARQKFSCLMEEQEKLQKHGVCIRVLGDLHLLPLDLQEKIAHAI 142
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T+ L + F Y+SR EI+ A++ + +E G + DV SL+ K L ++ P
Sbjct: 143 QATKNYNKCFLNVCFAYTSRHEIANAVREMAWGVEQGLLEPSDVSESLLDKCLYSNHSPH 202
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PD++IRT GE RLSDFLLWQ ++S VF P WP+++ A+ Q+ R G L K
Sbjct: 203 PDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLCEAILQFQ---RNHGALQK 259
>gi|302760519|ref|XP_002963682.1| hypothetical protein SELMODRAFT_80505 [Selaginella moellendorffii]
gi|300168950|gb|EFJ35553.1| hypothetical protein SELMODRAFT_80505 [Selaginella moellendorffii]
Length = 236
Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats.
Identities = 101/236 (42%), Positives = 144/236 (61%), Gaps = 3/236 (1%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P+H+ IIMDGN RWA RGL GH G+ EIVAA++ +GIK LT+FAFS NWR
Sbjct: 1 MPEHVAIIMDGNSRWAKLRGLATDRGHEAGVHALREIVAASSRLGIKILTVFAFSTENWR 60
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP EI L++L + + + ++ I V IG+ L + + + +++TR N G
Sbjct: 61 RPTIEIQFLMQLFERVISEDSMNIFTKGICVHFIGDLSRLPGTLRLLACQIQERTRHNKG 120
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT---SDVPDPDLII 186
L L + +YS R ++ +A K + +++ GSV ++D S + L T ++ DPDL+I
Sbjct: 121 LKLVVGLSYSGRQDLVQACKAVAAEVQRGSVDLDEIDESKLESKLLTTWDEEISDPDLLI 180
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GEKRLS+F+LWQ+AY+E VF+PE WPDF + AL +Y RDRRFG K
Sbjct: 181 RTSGEKRLSNFMLWQLAYTELVFVPELWPDFGENEYRVALAEYQERDRRFGRHQNK 236
>gi|289523070|ref|ZP_06439924.1| di-trans,poly-cis-decaprenylcistransferase [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289503613|gb|EFD24777.1| di-trans,poly-cis-decaprenylcistransferase [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 223
Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats.
Identities = 91/222 (40%), Positives = 124/222 (55%), Gaps = 1/222 (0%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA R LPR GH G++ + V AA E+GI+ L++FAFS NW RP E+
Sbjct: 1 MDGNGRWARQRHLPRIMGHYAGVKAVEKTVMAALEMGIRYLSLFAFSTENWTRPKGEVLG 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L L + ++K L + NI++R G L +D+ + AE +T L+L + N
Sbjct: 61 LFGLFRYYIKCKVKKLVEENIRLRFSGRIDKLPEDLRDLAFWAEKETEAGDKLDLILCLN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R EI A+ I ++ ++D YL DVPDPDLIIRT GEKRLS+F
Sbjct: 121 YGGRQEIIDAVNKIL-AAKTDCDDVSEIDEYYFRGYLYLPDVPDPDLIIRTSGEKRLSNF 179
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
LWQ +YSE F WP+F A+ +Y R+RR+GG+
Sbjct: 180 WLWQSSYSELYFTDCLWPEFDEGKLREAVEEYQKRERRYGGI 221
>gi|72160860|ref|YP_288517.1| undecaprenyl pyrophosphate synthetase [Thermobifida fusca YX]
gi|71914592|gb|AAZ54494.1| Undecaprenyl pyrophosphate synthetase [Thermobifida fusca YX]
Length = 254
Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats.
Identities = 88/242 (36%), Positives = 134/242 (55%), Gaps = 9/242 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLP-RCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ ++ ++ P H+G+I+DGN RWA GL GHR G E E++ EVG++ +T
Sbjct: 16 LERALSNAPKPRHVGVILDGNRRWARLSGLSSPKEGHRAGAEKIFELLDWCDEVGVQVVT 75
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++ S +N RP E+ L ++I++ +++ L +V +G L V+KE
Sbjct: 76 LWLLSTDNLARPPEELEPLFEIIENTVRR----LCNEGRRVNPMGALDLLPASTAQVMKE 131
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLD 175
A T N GL + +A Y R EI+ A++++ + + ++ L IAK+L
Sbjct: 132 AGTTTERNPGLLVNVAVGYGGRREIADAVRSLLLEEAAKGTTLEELAERLDLDDIAKHLY 191
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
T PDPDL+IRT GE+RLS FLLWQ A+SEF F +WP F + F AL Y++R RR
Sbjct: 192 TRGQPDPDLLIRTSGEQRLSGFLLWQSAHSEFYFCEVFWPAFRKIDFLRALRSYSVRQRR 251
Query: 236 FG 237
FG
Sbjct: 252 FG 253
>gi|18400264|ref|NP_565551.1| ACPT (Arabidopsis cis-prenyltransferase); dehydrodolichyl
diphosphate synthase [Arabidopsis thaliana]
gi|75223198|sp|O80458|DDPS1_ARATH RecName: Full=Dehydrodolichyl diphosphate synthase 1;
Short=Dedol-PP synthase 1
gi|6651294|gb|AAF22257.1|AF162441_1 cis-prenyltransferase homolog [Arabidopsis thaliana]
gi|7960765|emb|CAB91841.1| dehydrodolichyl diphosphate synthase [Arabidopsis thaliana]
gi|20196999|gb|AAC23756.2| expressed protein [Arabidopsis thaliana]
gi|330252358|gb|AEC07452.1| dehydrodolichyl diphosphate synthase 1 [Arabidopsis thaliana]
Length = 303
Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats.
Identities = 90/236 (38%), Positives = 133/236 (56%), Gaps = 3/236 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P H+ I+DGN RWA GL GH G + +I E+G+ ++ FAFS
Sbjct: 65 LQRELMPRHVAFILDGNRRWAKRAGLTTSQGHEAGAKRLIDIAELCFELGVHTVSAFAFS 124
Query: 65 INNWRRPVSEISELVKLIKSFLKK-GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
NW R EI L+ LI+ + K ++ ++V VIGN+ + + +L + E E+
Sbjct: 125 TENWGRDKIEIDNLMSLIQHYRNKSNIKFFHRSEVRVSVIGNKTKIPESLLKEIHEIEEA 184
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT--SDVPD 181
T+ +L +A +YS + +I A K++ + E G + DVD +LI + L T SD P
Sbjct: 185 TKGYKNKHLIMAVDYSGKFDIMHACKSLVKKSEKGLIREEDVDEALIERELLTNCSDFPS 244
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDL+IRT GE+R+S+F LWQ+AYSE F P +WPDF ++ AL Y R+RRFG
Sbjct: 245 PDLMIRTSGEQRISNFFLWQLAYSELFFSPVFWPDFDKDKLLEALASYQRRERRFG 300
>gi|157827276|ref|YP_001496340.1| undecaprenyl pyrophosphate synthetase [Rickettsia bellii OSU
85-389]
gi|157802580|gb|ABV79303.1| Undecaprenyl pyrophosphate synthetase [Rickettsia bellii OSU
85-389]
Length = 226
Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats.
Identities = 92/227 (40%), Positives = 134/227 (59%), Gaps = 6/227 (2%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGN RWAA LP+ GHR G + +E++ + I +T++ FS NW+R
Sbjct: 5 KHLAIIMDGNARWAATHNLPKSEGHRAGADKVHELLPEFINLKIPYVTLYTFSSENWQRS 64
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
+EIS L++L+ +LKK +L KN IK++VIG L D + + A + T+ N L
Sbjct: 65 NTEISFLMRLLNIYLKKELDNLHKNGIKIKVIGRLNLLSDSLQKQINNAIELTKDNNKLT 124
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L IAF+Y SR EI+ A I ++ ++ S I L ++PD DL+IR GG
Sbjct: 125 LCIAFSYGSRQEITDACTKIIASGKT------EILESDIQNALYDPEMPDVDLLIRPGGV 178
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R+S+FLLWQ AY+E F +YWPDF++E +A++ Y+ R R FG
Sbjct: 179 FRISNFLLWQAAYAELYFSQKYWPDFNKEDIINAIDDYSKRKRTFGK 225
>gi|315604781|ref|ZP_07879841.1| undecaprenyl diphosphate synthase [Actinomyces sp. oral taxon 180
str. F0310]
gi|315313510|gb|EFU61567.1| undecaprenyl diphosphate synthase [Actinomyces sp. oral taxon 180
str. F0310]
Length = 274
Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats.
Identities = 85/233 (36%), Positives = 135/233 (57%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
P H+ +IMDGNGRWA RGL R GHR G + +A A + G++ L+++ FS
Sbjct: 34 RRGEVPAHVALIMDGNGRWANGRGLGRTEGHRAGEYALMDTIAGAIDAGVRYLSVYTFST 93
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+R +E+S ++ L + L + + VR G R L ++ L++A+ T
Sbjct: 94 ENWKRSPAEVSFIMNYASDVLARRTDQLAQWGVHVRWSGRRPRLWRSVINALEKADRATS 153
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
+ L+L + NY R E++ A ++I + + +G + V +A++L DVPD DL+
Sbjct: 154 HCSTLDLIMCVNYGGRAELADAARSIAEGVAAGRLSPRGVTEKTLARHLYLPDVPDVDLM 213
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
IRT GE+R+S++LLWQ+AY+E +F+ WP F RE + L ++ R+RRFGG
Sbjct: 214 IRTSGEQRISNYLLWQMAYAEMMFVDTPWPAFDREELWGCLEEFAGRERRFGG 266
>gi|157825710|ref|YP_001493430.1| undecaprenyl pyrophosphate synthetase [Rickettsia akari str.
Hartford]
gi|157799668|gb|ABV74922.1| Undecaprenyl pyrophosphate synthetase [Rickettsia akari str.
Hartford]
Length = 226
Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats.
Identities = 87/227 (38%), Positives = 125/227 (55%), Gaps = 6/227 (2%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGN RWA L + GH+ G + E++ + I +T++ FS NW+R
Sbjct: 5 KHLAIIMDGNARWADWHNLTKSEGHKAGADKIRELLPEVINLNIPYITLYTFSSENWQRS 64
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
+E+ L+KL+ +LK SL KN +K++VIG L + + A + T N +
Sbjct: 65 NTEVDFLIKLLSIYLKNELNSLHKNGVKIKVIGRLNLLSSSLQKQINNAIELTENNNKIT 124
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L IAF+Y SR EI A I + +V S I L ++PD DL+IR GG
Sbjct: 125 LCIAFSYGSRQEIVDACTKIIASGKK------EVSESDIQHALYDPEMPDVDLLIRAGGV 178
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R+S+FLLWQ AY+E F P+YWPDF+++ A+N Y+ R R FG
Sbjct: 179 YRISNFLLWQAAYAELYFSPKYWPDFNKDDILEAINDYSKRKRTFGK 225
>gi|226823339|ref|NP_001152808.1| dehydrodolichyl diphosphate synthase [Oncorhynchus mykiss]
gi|206994191|emb|CAR79336.1| dehydrodolichyl diphosphate synthase [Oncorhynchus mykiss]
Length = 335
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 84/238 (35%), Positives = 133/238 (55%), Gaps = 4/238 (1%)
Query: 1 MVASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ A+++ + P P H+ IMDGN R+A R + R GH +G + E + + I +T
Sbjct: 15 LSANILKAGPMPKHVAFIMDGNRRYARKRHVERQEGHTQGFDKLAETLRWCLNLSIHEVT 74
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCV 116
++AFSI N++R E+ L++L K + L+K+ + +RV+G+ L D+
Sbjct: 75 VYAFSIENFKRSKDEVDGLMELAKQKFIRLLQEQDNLEKHGVCIRVLGDLTLLPLDLQQH 134
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT 176
+ A TR + L + F Y+SR EI+ A++ + +E G + S DV +L+ L +
Sbjct: 135 IARAVVATRTHNKCFLNVCFAYTSRHEIANAVREMAWGVEQGLIKSSDVSEALLGHCLYS 194
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
S+ P+PDL+IRT GE RLSDFLLWQ ++S VF WP++S A+ QY L R
Sbjct: 195 SNSPNPDLLIRTSGEVRLSDFLLWQTSHSCLVFQSVLWPEYSFWNLCDAILQYQLNHR 252
>gi|284033478|ref|YP_003383409.1| undecaprenyl diphosphate synthase [Kribbella flavida DSM 17836]
gi|283812771|gb|ADB34610.1| undecaprenyl diphosphate synthase [Kribbella flavida DSM 17836]
Length = 259
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 86/241 (35%), Positives = 126/241 (52%), Gaps = 7/241 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ S+ P HIG+I+DGN RWA A G P GH G E + EVG+K +T+
Sbjct: 21 LARSLSPDRMPRHIGVIIDGNRRWARAAGDPVSRGHEAGASKIAEFLDWCDEVGVKVVTV 80
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N RP E+ L+++I+ +++ ++ +G L VLK A
Sbjct: 81 WMLSTDNLTRPADELEPLLRIIEQTVEEL---ASVGGRRIHPVGALDLLPAATAEVLKSA 137
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDT 176
E T+ GL + +A Y R E++ A++++ + + + + VD IA++L T
Sbjct: 138 ETATQHVDGLLVNVAVGYGGRRELADAVRSLLLEEAAKGISIEELAERVDVEHIAEHLYT 197
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
PDPDL+IRT GE+RL FLLWQ A SEF F WPDF F A+ Y R+RRF
Sbjct: 198 KGQPDPDLVIRTSGEQRLGGFLLWQSALSEFYFCEALWPDFRHVDFLRAIRSYAQRERRF 257
Query: 237 G 237
G
Sbjct: 258 G 258
>gi|281351599|gb|EFB27183.1| hypothetical protein PANDA_001151 [Ailuropoda melanoleuca]
Length = 320
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 82/228 (35%), Positives = 125/228 (54%), Gaps = 3/228 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ P HI IMDGN R+A + R GH +G E + +GI +T++AFSI
Sbjct: 7 QAGPMPKHIAFIMDGNRRYARKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTVYAFSI 66
Query: 66 NNWRRPVSEISELVKLIKSF---LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
N++R SE+ L+ L + L + L+K+ + +RV+G+ L D+ ++ +A
Sbjct: 67 ENFKRSKSEVDGLMDLARQKFSRLMEEQEKLQKHGVCIRVLGDLHLLPLDLQELIAQAVQ 126
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T+ L + F Y+SR EIS A++ + +E G + DV SL+ K L T+ P P
Sbjct: 127 ATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDVSESLLDKCLYTNHSPQP 186
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
D++IRT GE RLSDFLLWQ ++S VF P WP+++ A+ QY
Sbjct: 187 DILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLCEAILQYQ 234
>gi|224081661|ref|XP_002194939.1| PREDICTED: similar to Dehydrodolichyl diphosphate synthase
[Taeniopygia guttata]
Length = 333
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 82/229 (35%), Positives = 127/229 (55%), Gaps = 3/229 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P H+ IMDGN R+A + R GH +G + + + +GI+ +T++AFS
Sbjct: 20 IKAGPMPKHVAFIMDGNRRYAQKCHVERQQGHSQGFDKLAQTLRWCLNLGIREVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R E+ L+ L + + LKK+ + +RV+G+ L DI ++ +A
Sbjct: 80 IENFKRSKEEVDGLMDLARQKFSRLLEEQENLKKHGVCIRVLGDLPLLPVDIQELIAQAV 139
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
TR L + F Y+SR EIS A++ + +E G + DV SL+ K L T++ PD
Sbjct: 140 LATRNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLEPSDVSESLLDKCLYTNNSPD 199
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
PDL+IRT GE RLSDFLLWQ ++S VF WP++S A+ Q+
Sbjct: 200 PDLLIRTSGEVRLSDFLLWQTSHSCLVFQSVLWPEYSFWNLCEAILQFQ 248
>gi|183221972|ref|YP_001839968.1| undecaprenyl pyrophosphate synthase [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
gi|189912040|ref|YP_001963595.1| undecaprenyl pyrophosphate synthase [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167776716|gb|ABZ95017.1| Undecaprenyl pyrophosphate synthase [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167780394|gb|ABZ98692.1| Undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) [Leptospira
biflexa serovar Patoc strain 'Patoc 1 (Paris)']
Length = 237
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 84/236 (35%), Positives = 123/236 (52%), Gaps = 1/236 (0%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M + P HI +IMDGNGRWA +G R GHR+G + ++ A E I N++++AFS
Sbjct: 1 MKLHTIPAHIAVIMDGNGRWAENQGKKRTEGHREGANAIDRLLDVALEYKIPNISLYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP++EI + L+ F++ ++ I++ G R L +L + A T
Sbjct: 61 TENWKRPITEIQAIFGLLVEFIETRLDTIHAKGIRIHHSGARNKLSKTVLKKIDHAMAVT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD-VDSSLIAKYLDTSDVPDPD 183
+ N L NY +EI + ++ + KYL TS +P D
Sbjct: 121 KKNKKLTANFCLNYGGHEEILSNFSRVMAARKAKKETLDKPISPKEFEKYLYTSPLPPVD 180
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
L+IRT GE+R+S+FLLWQ AY+E F WPDF R AL ++ R R+FGGL
Sbjct: 181 LLIRTAGEQRISNFLLWQSAYAEMYFTSTLWPDFGRTSLEEALLFFDSRKRKFGGL 236
>gi|254779765|ref|YP_003057871.1| undecaprenyl pyrophosphate synthase [Helicobacter pylori B38]
gi|254001677|emb|CAX29894.1| Undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) (UPP
synthetase) (Di-trans,poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS) [Helicobacter
pylori B38]
Length = 234
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 85/229 (37%), Positives = 132/229 (57%), Gaps = 1/229 (0%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE+ L+K++K +LK + NNI+ R IG+ ++ + + E+ TR
Sbjct: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFPKELRDTILQLENDTRHFKDFT 125
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+A NY S++E+SRA + + + + I+ LDT D+P+ DL++RTGGE
Sbjct: 126 QVLALNYGSKNELSRA-FKSLLENPPSHINPIESLENEISNRLDTHDLPEVDLLLRTGGE 184
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELK 233
>gi|296536125|ref|ZP_06898254.1| Di-trans,poly-cis-decaprenylcistransferase [Roseomonas cervicalis
ATCC 49957]
gi|296263537|gb|EFH10033.1| Di-trans,poly-cis-decaprenylcistransferase [Roseomonas cervicalis
ATCC 49957]
Length = 257
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 105/227 (46%), Positives = 145/227 (63%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+G+IMDGN RWA RGLPR GH+ G+E V AAA+ GI LT+FAFS NW+R
Sbjct: 27 PVHVGLIMDGNRRWAKGRGLPRALGHKAGVEAVRRTVQAAADAGIGWLTLFAFSSENWQR 86
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ +L L++ +L+ +L +N +++RVIG R D + ++EAE T NT L
Sbjct: 87 SADEVRDLTGLLRLYLRLEVATLARNGVRLRVIGERARFGADTMAAIEEAEAATAHNTRL 146
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
NL +A +Y +R EI+ A + + +I +G + VD + +A L T+ +PDPDLIIRT G
Sbjct: 147 NLTVALSYGARAEIAAAARAVAAEIAAGRLAPEAVDEAALAARLSTAGMPDPDLIIRTSG 206
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
E+RLS+FLLWQ AY+EFVF+ WPDF AL ++ R RRFG
Sbjct: 207 EQRLSNFLLWQAAYAEFVFLDVLWPDFEAAHLDQALAEFRRRQRRFG 253
>gi|108999720|ref|XP_001109252.1| PREDICTED: dehydrodolichyl diphosphate synthase-like isoform 2
[Macaca mulatta]
gi|108999723|ref|XP_001109408.1| PREDICTED: dehydrodolichyl diphosphate synthase-like isoform 3
[Macaca mulatta]
gi|332245104|ref|XP_003271703.1| PREDICTED: dehydrodolichyl diphosphate synthase [Nomascus
leucogenys]
Length = 334
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 81/229 (35%), Positives = 127/229 (55%), Gaps = 3/229 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IMDGN R+A + R GH +G E + +GI +T++AFS
Sbjct: 20 IKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSF---LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R SE+ L+ L + L + L+K+ + +RV+G+ L D+ ++ +A
Sbjct: 80 IENFKRSKSEVDGLMDLARQKFSRLMEEQEKLQKHGVCIRVLGDLHLLPLDLQELIAQAV 139
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T+ L + F Y+SR EIS A++ + +E G + D+ SL+ K L T+ P
Sbjct: 140 QATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDISESLLDKCLYTNRSPH 199
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
PD++IRT GE RLSDFLLWQ ++S VF P WP+++ F A+ Q+
Sbjct: 200 PDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQ 248
>gi|45580742|ref|NP_079163.2| dehydrodolichyl diphosphate synthase isoform a [Homo sapiens]
gi|56206243|emb|CAI21495.1| dehydrodolichyl diphosphate synthase [Homo sapiens]
gi|119628211|gb|EAX07806.1| dehydrodolichyl diphosphate synthase, isoform CRA_a [Homo sapiens]
gi|119628216|gb|EAX07811.1| dehydrodolichyl diphosphate synthase, isoform CRA_a [Homo sapiens]
Length = 334
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 81/229 (35%), Positives = 127/229 (55%), Gaps = 3/229 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IMDGN R+A + R GH +G E + +GI +T++AFS
Sbjct: 20 IKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSF---LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R SE+ L+ L + L + L+K+ + +RV+G+ L D+ ++ +A
Sbjct: 80 IENFKRSKSEVDGLMDLARQKFSRLMEEKEKLQKHGVCIRVLGDLHLLPLDLQELIAQAV 139
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T+ L + F Y+SR EIS A++ + +E G + D+ SL+ K L T+ P
Sbjct: 140 QATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDISESLLDKCLYTNRSPH 199
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
PD++IRT GE RLSDFLLWQ ++S VF P WP+++ F A+ Q+
Sbjct: 200 PDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQ 248
>gi|126253821|sp|Q1RII8|UPPS_RICBR RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
Length = 226
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 92/227 (40%), Positives = 134/227 (59%), Gaps = 6/227 (2%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGN RWAA LP+ GHR G + +E++ + I +T++ FS NW+R
Sbjct: 5 KHLAIIMDGNARWAATHNLPKSEGHRAGADKVHELLPEFINLKIPYITLYTFSSENWQRS 64
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
+EIS L++L+ +LKK +L KN IK++VIG L D + + A + T+ N L
Sbjct: 65 NTEISFLMRLLNIYLKKELDNLHKNGIKIKVIGRLNLLSDSLQKQINNAIELTKDNNKLT 124
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L IAF+Y SR EI+ A I ++ ++ S I L ++PD DL+IR GG
Sbjct: 125 LCIAFSYGSRQEITDACTKIIASGKT------EILESDIQNALYDPEMPDVDLLIRPGGV 178
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R+S+FLLWQ AY+E F +YWPDF++E +A++ Y+ R R FG
Sbjct: 179 FRISNFLLWQAAYAELYFSQKYWPDFNKEDIINAIDDYSKRKRTFGK 225
>gi|86739980|ref|YP_480380.1| undecaprenyl pyrophosphate synthetase [Frankia sp. CcI3]
gi|86566842|gb|ABD10651.1| Undecaprenyl pyrophosphate synthetase [Frankia sp. CcI3]
Length = 265
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 95/235 (40%), Positives = 138/235 (58%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ S P H+GI+MDGNGRWA RGL R GH G + + V A E+G++ L++FAFS
Sbjct: 26 LPSRLVPRHVGIVMDGNGRWAKMRGLARTKGHEAGEDALFDCVEGAIELGVRWLSVFAFS 85
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+R E++ L++ + + ++VR G R L +++ L+ +E++T
Sbjct: 86 TENWKRSPDEVAFLMRFTDGVFGRRIEDMHALGVRVRWAGRRPRLWGNVIRRLESSEERT 145
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
R N L L + NY R EI+ A I +D+ G + +D + I +YLD D+PD DL
Sbjct: 146 RDNDRLTLVMCVNYGGRAEIADAAAAIARDVREGRLRVDRIDEATIGRYLDEPDMPDLDL 205
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE+RLS+FLLWQ AY+EF F+ WPDF R + A + RDRR+GG
Sbjct: 206 VIRTSGEQRLSNFLLWQAAYAEFSFVETLWPDFDRRDLWSACEDFARRDRRYGGT 260
>gi|305681226|ref|ZP_07404033.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
matruchotii ATCC 14266]
gi|305659431|gb|EFM48931.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
matruchotii ATCC 14266]
Length = 245
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 91/230 (39%), Positives = 132/230 (57%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI ++MDGNGRWA RGL R GH++G V ++VAA + I L+ +AFS NWRR
Sbjct: 16 PRHIALVMDGNGRWAEQRGLKRTEGHKRGEAVLLDMVAACQALDIPYLSAYAFSTENWRR 75
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ L+ + L + L + +KVR +G R L +L L+ AE+ T+ NT +
Sbjct: 76 SADEVRFLMGFNRDVLTRQKMWLHERGVKVRWVGRRPRLWRSVLRELESAEELTKNNTSM 135
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
LF+ NY R EI ++ I + + G + D+ +LD +PD DL +R G
Sbjct: 136 TLFMCVNYGGRAEIIDGVREIVRKAQRGEIRPDDITEKNFHTFLDEPTMPDVDLFLRPSG 195
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
EKR S+FLLWQ AY+E V+ + +PD++ + F A+ +Y RDRRFGG
Sbjct: 196 EKRTSNFLLWQSAYAEMVYQNKLFPDYTPQDLFDAVEEYAKRDRRFGGTK 245
>gi|227874982|ref|ZP_03993131.1| undecaprenyl pyrophosphate synthetase [Mobiluncus mulieris ATCC
35243]
gi|227844431|gb|EEJ54591.1| undecaprenyl pyrophosphate synthetase [Mobiluncus mulieris ATCC
35243]
Length = 287
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 90/226 (39%), Positives = 132/226 (58%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA A+GL R AGH G + +A A G+K L+++AFS NWRR
Sbjct: 51 HVAIIMDGNGRWANAQGLNRTAGHEAGEYALMDTIAGAVAAGVKYLSVYAFSTENWRRSP 110
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+E+ L+ + L+ L + ++VR G L +L L+ AE TR N+G+ L
Sbjct: 111 AEVKFLMGYSRRVLRARRDELNRWGVRVRWSGREGRLWKSVLAELRAAEALTRDNSGMQL 170
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+ NY R E++ A + + + + + + +V +A+ L DVPD DL+IRT GE+
Sbjct: 171 IMCVNYGGRAELADAARAVAARVATREIRAENVTEKTLARELYLPDVPDVDLLIRTSGEQ 230
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R+S+FL WQ AY+E VF PE WP+++RE + L + R RRFG
Sbjct: 231 RISNFLPWQAAYAELVFAPEPWPEYNRETLWRDLLVFQSRQRRFGA 276
>gi|171059527|ref|YP_001791876.1| undecaprenyl diphosphate synthase [Leptothrix cholodnii SP-6]
gi|170776972|gb|ACB35111.1| undecaprenyl diphosphate synthase [Leptothrix cholodnii SP-6]
Length = 257
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 91/235 (38%), Positives = 138/235 (58%), Gaps = 4/235 (1%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
++SS P H+ I+MDGNGRWA R +PR GH+ G++ I+ A A+ GI +LT+FAFS
Sbjct: 11 LTSSLPRHVAIVMDGNGRWANRRLMPRVVGHKFGVDALIRIINACADRGIGHLTVFAFSS 70
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW RP E+S L+ L+ + K + ++ +++R+IG+R + + EAE T
Sbjct: 71 ENWNRPQEEVSGLMNLVLVAVSKYLARMAEDGVRIRIIGDRAEVSQKVRTAWDEAERLTE 130
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N + + +AFNY R ++ +A + + + V + +D + +++++ + PDPD
Sbjct: 131 NNRRITVSVAFNYGGRWDVVQACRALV----ASGVTADQIDEAALSRHMSLAYAPDPDFF 186
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
IRTGGE R+S+FLLWQ AYSE F WPDF AL Y RDRRFG +
Sbjct: 187 IRTGGEVRISNFLLWQAAYSELYFTDCLWPDFDERALDAALADYASRDRRFGRVK 241
>gi|45580738|ref|NP_995583.1| dehydrodolichyl diphosphate synthase isoform b [Homo sapiens]
gi|116241329|sp|Q86SQ9|DHDDS_HUMAN RecName: Full=Dehydrodolichyl diphosphate synthase; Short=Dedol-PP
synthase
gi|28557344|dbj|BAC57588.1| dehydrodolichyl diphosphate synthase [Homo sapiens]
gi|119628215|gb|EAX07810.1| dehydrodolichyl diphosphate synthase, isoform CRA_d [Homo sapiens]
gi|119628217|gb|EAX07812.1| dehydrodolichyl diphosphate synthase, isoform CRA_d [Homo sapiens]
Length = 333
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 81/229 (35%), Positives = 127/229 (55%), Gaps = 3/229 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IMDGN R+A + R GH +G E + +GI +T++AFS
Sbjct: 20 IKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSF---LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R SE+ L+ L + L + L+K+ + +RV+G+ L D+ ++ +A
Sbjct: 80 IENFKRSKSEVDGLMDLARQKFSRLMEEKEKLQKHGVCIRVLGDLHLLPLDLQELIAQAV 139
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T+ L + F Y+SR EIS A++ + +E G + D+ SL+ K L T+ P
Sbjct: 140 QATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDISESLLDKCLYTNRSPH 199
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
PD++IRT GE RLSDFLLWQ ++S VF P WP+++ F A+ Q+
Sbjct: 200 PDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQ 248
>gi|305681959|ref|ZP_07404763.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
matruchotii ATCC 14266]
gi|305658432|gb|EFM47935.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
matruchotii ATCC 14266]
Length = 258
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 87/243 (35%), Positives = 132/243 (54%), Gaps = 7/243 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARG-LPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
++ + + P+H+ I+ DGN RWA G + GHR G + E+V+ A+ ++ +T
Sbjct: 18 LLREISGAKRPEHVAIMCDGNRRWAREAGFIDVSHGHRVGAKKIGELVSWCADTDVELVT 77
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
I+ S N R E+ L+ +I + + S N +VR++G+ L + I L
Sbjct: 78 IYLLSTENLGRDAEELQLLLDIICDVVAEL--SAPHRNCRVRLVGHLNLLPEHISHRLSV 135
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNI----FQDIESGSVCSHDVDSSLIAKYLD 175
+ +QT+ NTG+ + +A Y R EI A+++ ++ + + V + IA +L
Sbjct: 136 SSEQTKTNTGVTVNVAVGYGGRQEIVDAVRDFIASEAREGTTTTELVEKVSAEAIASHLY 195
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
TS PDPDL+IRT GE+RLS FLLWQ AYSE F YWP F R F AL +Y+ R RR
Sbjct: 196 TSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEIWFTDTYWPAFRRLDFLRALREYSKRSRR 255
Query: 236 FGG 238
FG
Sbjct: 256 FGK 258
>gi|114554899|ref|XP_513233.2| PREDICTED: dehydrodolichyl diphosphate synthase isoform 13 [Pan
troglodytes]
gi|114554901|ref|XP_001144304.1| PREDICTED: dehydrodolichyl diphosphate synthase isoform 12 [Pan
troglodytes]
Length = 334
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 81/229 (35%), Positives = 127/229 (55%), Gaps = 3/229 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IMDGN R+A + R GH +G E + +GI +T++AFS
Sbjct: 20 IKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSF---LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R SE+ L+ L + L + L+K+ + +RV+G+ L D+ ++ +A
Sbjct: 80 IENFKRSKSEVDGLMDLARQKFSRLMEEQEKLQKHGVCIRVLGDLHLLPLDLQELIAQAV 139
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T+ L + F Y+SR EIS A++ + +E G + D+ SL+ K L T+ P
Sbjct: 140 QATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDISESLLDKCLYTNRSPH 199
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
PD++IRT GE RLSDFLLWQ ++S VF P WP+++ F A+ Q+
Sbjct: 200 PDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQ 248
>gi|258545342|ref|ZP_05705576.1| undecaprenyl diphosphate synthase [Cardiobacterium hominis ATCC
15826]
gi|258519445|gb|EEV88304.1| undecaprenyl diphosphate synthase [Cardiobacterium hominis ATCC
15826]
Length = 239
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 87/235 (37%), Positives = 142/235 (60%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ +PP H+ IIMDGNGRWA PR GH+ G + +V A A+ G+K L+++AFS
Sbjct: 4 ARTPPAHVAIIMDGNGRWAQQHLRPRAFGHKAGRVAVDRVVTACAKAGVKMLSLYAFSTE 63
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP E+ L++LI++ L++ ++KN+I++RV+G+R +L + + +AE T
Sbjct: 64 NWRRPPHEVKILMELIETALREEAEKMRKNDIRLRVLGDRTALSASLRSAIDDAEALTAS 123
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
+ +++ +A NYS + + + + Q + G++ + +D + + + D+P DL+I
Sbjct: 124 GSRMDVVLAINYSGQWALCETARRLAQAVADGTLQADAIDEAAFSAHRPMPDLPPVDLLI 183
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
R+ GE RLS+F LW++AY+E F WPDF A Y+ RDRRFG LS+
Sbjct: 184 RSSGEMRLSNFHLWELAYAELWFTDVLWPDFGEAQLDAAFAAYHHRDRRFGALSQ 238
>gi|23008280|ref|ZP_00049791.1| COG0020: Undecaprenyl pyrophosphate synthase [Magnetospirillum
magnetotacticum MS-1]
Length = 266
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 90/235 (38%), Positives = 142/235 (60%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ + P+H+ ++MDGNGRWA ARGLPR AGH G ++VA A E+G+K+++ +AF
Sbjct: 19 AIPAQFVPNHVAVVMDGNGRWANARGLPRTAGHEAGEAALLDVVAGAIEIGVKHVSAYAF 78
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+ L+ + +++ + ++VR G R L ++ L+ AE+Q
Sbjct: 79 STENWKRSPDEVRFLMGFNRDVIRRRRDEMDSWGVRVRWAGRRPRLWASVIKELEVAEEQ 138
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N L + NY R EI+ A I +++ +G + V + ++LD D+PD D
Sbjct: 139 TKQNDVCTLTMCVNYGGRAEIADAAAAIAREVAAGRIDPRKVTERTVQQHLDEPDLPDVD 198
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L +R+ GE+R S+F+LWQ AY+E VF+PE WPD R + A+ +Y RDRR+GG
Sbjct: 199 LFLRSSGEQRTSNFMLWQAAYAELVFLPEPWPDVDRRSLWRAVEEYARRDRRYGG 253
>gi|114554903|ref|XP_001143625.1| PREDICTED: dehydrodolichyl diphosphate synthase isoform 4 [Pan
troglodytes]
gi|114554905|ref|XP_001143689.1| PREDICTED: dehydrodolichyl diphosphate synthase isoform 5 [Pan
troglodytes]
gi|114554907|ref|XP_001143769.1| PREDICTED: dehydrodolichyl diphosphate synthase isoform 6 [Pan
troglodytes]
gi|114554909|ref|XP_001143856.1| PREDICTED: dehydrodolichyl diphosphate synthase isoform 7 [Pan
troglodytes]
gi|114554911|ref|XP_001143927.1| PREDICTED: dehydrodolichyl diphosphate synthase isoform 8 [Pan
troglodytes]
Length = 333
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 81/229 (35%), Positives = 127/229 (55%), Gaps = 3/229 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IMDGN R+A + R GH +G E + +GI +T++AFS
Sbjct: 20 IKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSF---LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R SE+ L+ L + L + L+K+ + +RV+G+ L D+ ++ +A
Sbjct: 80 IENFKRSKSEVDGLMDLARQKFSRLMEEQEKLQKHGVCIRVLGDLHLLPLDLQELIAQAV 139
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T+ L + F Y+SR EIS A++ + +E G + D+ SL+ K L T+ P
Sbjct: 140 QATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDISESLLDKCLYTNRSPH 199
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
PD++IRT GE RLSDFLLWQ ++S VF P WP+++ F A+ Q+
Sbjct: 200 PDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQ 248
>gi|110004373|emb|CAK98711.1| undecaprenyl pyrophosphate synthetase protein [Spiroplasma citri]
Length = 235
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 87/233 (37%), Positives = 128/233 (54%), Gaps = 7/233 (3%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HI II+DGNGRWA +GL R GH +G + ++ A +G+K LTI+ FS NW
Sbjct: 2 KIPQHIAIILDGNGRWATKQGLERTVGHEEGAKRIKDVALKANALGVKYLTIYCFSTENW 61
Query: 69 RRPVSEISELVKLIKSFLK-KGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
+R E++ L+ + + L K + K NI + IG R + L + A QT+ N
Sbjct: 62 KRNAQEVTYLMAMPERLLNNKQVNNFKNENIVLNHIGRRTKMPPKTLAAINNAILQTKDN 121
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
G+ L AF+Y + +E+ AI + +D + ++L T+D+PD DL+IR
Sbjct: 122 NGMVLTFAFDYGAIEELLTAINQMLVK------KLTSIDEKTLFQHLYTADLPDVDLMIR 175
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
GGE+RLS+FLL Q Y+E F +WP+F A+ YN R+RRFGG+
Sbjct: 176 CGGEQRLSNFLLLQNRYAELYFTKAFWPEFDENALTAAILDYNNRNRRFGGIE 228
>gi|320095933|ref|ZP_08027553.1| di-trans,poly-cis-decaprenylcistransferase [Actinomyces sp. oral
taxon 178 str. F0338]
gi|319977124|gb|EFW08847.1| di-trans,poly-cis-decaprenylcistransferase [Actinomyces sp. oral
taxon 178 str. F0338]
Length = 280
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 90/232 (38%), Positives = 136/232 (58%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
P H+ ++MDGNGRWA +RGLPR GHR G + +A A + G++ L+++ FS
Sbjct: 41 KGEAPAHVALVMDGNGRWANSRGLPRVEGHRAGEYALMDTIAGAIDAGVRYLSVYTFSTE 100
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW+R +E+S ++ L++ L++ + VR G R L ++ L++A+ T
Sbjct: 101 NWKRSPAEVSFIMNYASDVLERRTGQLREWGVHVRWSGRRPRLWKSVIRALEKADRATAH 160
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NT L+L + NY R EI+ A + I Q+ SG + V A++L DVPD DL+I
Sbjct: 161 NTALDLVMCVNYGGRAEIADAARAIAQEAASGRLSPRGVTERSFARHLYLPDVPDVDLMI 220
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
RT GE+R+S++LLWQ+AY+E +F+ WP F R + L Y R+RRFGG
Sbjct: 221 RTSGEQRVSNYLLWQLAYAEMMFVDTPWPAFDRGELWDCLLAYAGRERRFGG 272
>gi|225022973|ref|ZP_03712165.1| hypothetical protein CORMATOL_03019 [Corynebacterium matruchotii
ATCC 33806]
gi|224944196|gb|EEG25405.1| hypothetical protein CORMATOL_03019 [Corynebacterium matruchotii
ATCC 33806]
Length = 258
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 87/243 (35%), Positives = 129/243 (53%), Gaps = 7/243 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARG-LPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
++ + + P+H+ I+ DGN RWA G + GHR G + E+V+ A+ ++ +T
Sbjct: 18 LLREISGAKRPEHVAIMCDGNRRWAREAGFIDVSHGHRVGAKKIGELVSWCADTDVELVT 77
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
I+ S N R E+ L+ +I + + S N +VR++G+ L + I L
Sbjct: 78 IYLLSTENLGRDAEELQLLLDIICDVVAEL--STPHRNCRVRLVGHLNLLPEHISHRLSV 135
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCS----HDVDSSLIAKYLD 175
+ +QT+ NTG+ + +A Y R EI A+++ + V + IA +L
Sbjct: 136 SSEQTKTNTGVTVNVAVGYGGRQEIVDAVRDFIASEARKGTTTTELVEKVSAEAIASHLY 195
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
TS PDPDL+IRT GE+RLS FLLWQ AYSE F YWP F R F AL +Y+ R RR
Sbjct: 196 TSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEIWFTDTYWPAFRRLDFLRALREYSKRSRR 255
Query: 236 FGG 238
FG
Sbjct: 256 FGK 258
>gi|13177736|gb|AAH03643.1| Dehydrodolichyl diphosphate synthase [Homo sapiens]
gi|317040154|gb|ADU87642.1| epididymis secretory sperm binding protein Li 189m [Homo sapiens]
gi|325464253|gb|ADZ15897.1| dehydrodolichyl diphosphate synthase [synthetic construct]
Length = 333
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 81/229 (35%), Positives = 127/229 (55%), Gaps = 3/229 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IMDGN R+A + R GH +G E + +GI +T++AFS
Sbjct: 20 IKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSF---LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R SE+ L+ L + L + L+K+ + +RV+G+ L D+ ++ +A
Sbjct: 80 IENFKRSKSEVDGLMDLARQKFSRLMEEKEKLQKHGVCIRVLGDLHLLPLDLQELIAQAV 139
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T+ L + F Y+SR EIS A++ + +E G + D+ SL+ K L T+ P
Sbjct: 140 QATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDISESLLDKCLYTNRSPH 199
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
PD++IRT GE RLSDFLLWQ ++S VF P WP+++ F A+ Q+
Sbjct: 200 PDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQ 248
>gi|157803817|ref|YP_001492366.1| undecaprenyl pyrophosphate synthetase [Rickettsia canadensis str.
McKiel]
gi|157785080|gb|ABV73581.1| undecaprenyl pyrophosphate synthetase [Rickettsia canadensis str.
McKiel]
Length = 226
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 86/227 (37%), Positives = 126/227 (55%), Gaps = 6/227 (2%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ I+MDGN RWA LP+ GHR G + E++ GI +T++ FS NW+R
Sbjct: 5 KHLAIVMDGNARWADQNNLPKSTGHRTGADKIRELLPEFINFGIPYITLYTFSSENWQRS 64
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
+E+ L+KL +LK +L KN IK++VIG L+ + + A + T+ N +
Sbjct: 65 STEVDFLIKLFSIYLKTELNNLHKNGIKIKVIGRLNLLNSSLQKQINNAIELTKNNNKIT 124
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L IAF+Y SR EI A I + +V + + L ++PD DL+IR+GG
Sbjct: 125 LCIAFSYGSRQEIVDACTKIIASGKK------EVTENDLQDALYDPEMPDVDLLIRSGGV 178
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R+S+FLLWQ AY+E F +YWPDF ++ A+N Y+ R R FG
Sbjct: 179 YRISNFLLWQAAYAELYFSSKYWPDFHKDDIQDAINDYSKRKRTFGK 225
>gi|269125329|ref|YP_003298699.1| undecaprenyl diphosphate synthase [Thermomonospora curvata DSM
43183]
gi|268310287|gb|ACY96661.1| undecaprenyl diphosphate synthase [Thermomonospora curvata DSM
43183]
Length = 271
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 88/242 (36%), Positives = 137/242 (56%), Gaps = 9/242 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLT 59
+ +S+ + P H+G+I+DGN RWA A GL + GH++G + +E++ E ++ +T
Sbjct: 33 LESSLPTDKIPRHVGVILDGNRRWARAMGLSDVSTGHQRGADKISELLQWCTEARVEVVT 92
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++ S +N RP E++ L+++I++ + K L + ++ +G L D VLK
Sbjct: 93 LWMLSTDNLNRPAKELNPLLEIIENTVAK----LAREGWHIKAVGAMDLLPDSTARVLKH 148
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLD 175
AE+ T GL + +A Y R EI+ A++++ + ++ D IAK+L
Sbjct: 149 AEESTSDRPGLIVNVAVGYGGRREIADAVRSLLLEQAGKGTSIEELAEVLDVEHIAKHLY 208
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
T PDPDL+IRT GE+RLS FLLWQ A+SEF F +WPDF + F AL Y R RR
Sbjct: 209 TRGQPDPDLVIRTSGEQRLSGFLLWQSAHSEFHFCEVHWPDFRKIDFLRALRSYAARHRR 268
Query: 236 FG 237
FG
Sbjct: 269 FG 270
>gi|307332448|ref|ZP_07611512.1| undecaprenyl diphosphate synthase [Streptomyces violaceusniger Tu
4113]
gi|306881917|gb|EFN13039.1| undecaprenyl diphosphate synthase [Streptomyces violaceusniger Tu
4113]
Length = 262
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 84/239 (35%), Positives = 128/239 (53%), Gaps = 7/239 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ + P HIG+I+DGN RWA A G GH+ G E++ +E ++ +T++
Sbjct: 26 GRLDHAQVPKHIGVILDGNRRWARAAGGTAEQGHKAGASKIQELLGWCSETDVEVVTLWL 85
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
S +N RP +E+ L+ +I+ ++ +V +GNR L VLKEAE
Sbjct: 86 LSTDNLDRPENELGPLLSIIEGAVR---DLATDGRWRVHHVGNRDLLPSRTQTVLKEAER 142
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSD 178
T G+ + +A Y R EI+ A++++ D + + VD LI+++L T
Sbjct: 143 DTEHIDGILVNVAVGYGGRQEIADAVRSLLLDHATKGTSFEELAEVVDIDLISEHLYTRG 202
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDPDL+IRT GE+RLS F+LWQ A+SE+ F +WP F + F AL Y R RR+G
Sbjct: 203 QPDPDLVIRTSGEQRLSGFMLWQSAHSEYYFCEVFWPAFRKVDFLRALRDYAARHRRYG 261
>gi|297157597|gb|ADI07309.1| putative undecaprenyl diphosphate synthase [Streptomyces
bingchenggensis BCW-1]
Length = 253
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 85/239 (35%), Positives = 126/239 (52%), Gaps = 7/239 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ + P HIG+I+DGN RWA A G GH+ G E++ E ++ +T++
Sbjct: 17 GRLDHAQVPKHIGVILDGNRRWARAAGGTTEQGHKAGASKIQELLGWCNETDVEVVTLWM 76
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
S +N RP E+ L+ +I+ ++ +V +GNR L VLKEAE
Sbjct: 77 LSTDNLDRPEEELIPLLGIIEGAVR---DLAADGRWRVHHVGNRDLLPARTQTVLKEAER 133
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSD 178
T G+ + +A Y R EI+ A++++ D S + VD LI+++L T
Sbjct: 134 DTEHIDGILVNVAIGYGGRQEIADAVRSLLLDHASKGTSFEELAEVVDIDLISEHLYTRG 193
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDPDL+IRT GE+RLS F+LWQ A+SE+ F +WP F + F AL Y R RR+G
Sbjct: 194 QPDPDLVIRTSGEQRLSGFMLWQSAHSEYYFCEVFWPAFRKVDFLRALRDYAARHRRYG 252
>gi|110749872|ref|XP_623758.2| PREDICTED: dehydrodolichyl diphosphate synthase-like [Apis
mellifera]
Length = 295
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 80/234 (34%), Positives = 135/234 (57%), Gaps = 3/234 (1%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + + + P H+ IMDGN R+A+ G+ + GH KG + F E + + GI+ +T +
Sbjct: 17 IKILKAGNIPKHVAFIMDGNRRYASKNGIEKIEGHTKGFDKFAETLQWCMDFGIQEVTFY 76
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLK 118
AFSI N++R E++ L+ L + ++ +KK+ + VR+IGN L ++ ++
Sbjct: 77 AFSIENFKRKREEVNGLLNLAEQKFQRLLDEKDKIKKHGLCVRIIGNFSLLPKNLQELIA 136
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
E T+ + L IAF Y+SRDEI+ AIK++ + ++ G + S D+D L+ L T++
Sbjct: 137 ETMIITKEHKKGFLNIAFAYTSRDEITHAIKDVIEGVQCGDILSEDIDEELVCNCLYTNN 196
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLR 232
+PDL+IRT GE R SDFL+WQ++ + F WP+F+ F +A+ Y
Sbjct: 197 SKNPDLLIRTSGEVRFSDFLMWQISNTCIYFSNVLWPEFNLWEFLNAIFYYQRC 250
>gi|257461387|ref|ZP_05626483.1| di-trans,poly-cis-decaprenylcistransferase [Campylobacter gracilis
RM3268]
gi|257441110|gb|EEV16257.1| di-trans,poly-cis-decaprenylcistransferase [Campylobacter gracilis
RM3268]
Length = 225
Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats.
Identities = 93/228 (40%), Positives = 132/228 (57%), Gaps = 7/228 (3%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+H+ ++MDGNGRWA RGL R GH G EV +I + GI NLT++AFS NW+RP
Sbjct: 5 NHLALVMDGNGRWAKKRGLLRTGGHEAGAEVVEQICEFCIDEGIANLTLYAFSTENWKRP 64
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE+ L+KL++ FL +N IK IG+ + D+ ++ + T+ LN
Sbjct: 65 KSEVEFLMKLLQKFLISRREKFIQNGIKFHPIGDISAFSGDLRSEIEYLSNLTQNGRALN 124
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+A NY SRDEI RA + + + + I +LDT+ D DL++RTGGE
Sbjct: 125 FNLAINYGSRDEIVRACERLL-------ASGERLSEAGIGAHLDTAHSGDVDLLVRTGGE 177
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+RLS+FLLWQ +Y+E F P WPDF+RE ++ + + RRFGGL
Sbjct: 178 QRLSNFLLWQASYAELAFTPTLWPDFTREELARIVSDFRRKQRRFGGL 225
>gi|85373586|ref|YP_457648.1| undecaprenyl diphosphate synthase [Erythrobacter litoralis
HTCC2594]
gi|84786669|gb|ABC62851.1| undecaprenyl diphosphate synthase [Erythrobacter litoralis
HTCC2594]
Length = 225
Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats.
Identities = 89/233 (38%), Positives = 139/233 (59%), Gaps = 9/233 (3%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
MS +P H+ IIMDGNGRWA + LPR GHRKG+E E+V + + I+ LT++AFS
Sbjct: 1 MSHNPAKHVAIIMDGNGRWAKRKHLPRAMGHRKGVEAVRELVRSLKDTDIECLTLYAFSS 60
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
NW+RP E+ +L+ L++ F+K N++K+ ++G+ +L DI+ +L++A +QT+
Sbjct: 61 ENWKRPEDEVDDLMDLMRKFIKSDLPEFIANDVKLHILGDWRALAPDIVAMLEDALEQTK 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
+ + +A NY + EI + + ++ I L ++ +P DL+
Sbjct: 121 NGSR-TIAVALNYGGQAEIVH--------AARAAAATGEITEEAIEANLFSAGLPPLDLL 171
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
IRT GE RLS+FLLWQ AY+E +F+ WPDF+ AL+ + R+RRFGG
Sbjct: 172 IRTSGEVRLSNFLLWQAAYAEMLFVDTLWPDFTPAHLQQALDTFANRERRFGG 224
>gi|149694217|ref|XP_001504138.1| PREDICTED: similar to Dehydrodolichyl diphosphate synthase [Equus
caballus]
Length = 333
Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats.
Identities = 80/229 (34%), Positives = 126/229 (55%), Gaps = 3/229 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IMDGN R+A + R GH +G E + +G+ +T++AFS
Sbjct: 20 IKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGVLEVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSF---LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R SE+ L+ L + L + L+K+ + +RV+G+ L D+ ++ +A
Sbjct: 80 IENFKRSKSEVDGLMDLARQKFSRLMEEQEKLQKHGVCIRVLGDLHLLPLDLQELIAQAV 139
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T+ L + F Y+SR EIS A++ + +E G + DV SL+ K L T+ P
Sbjct: 140 QATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDVSESLLDKCLYTNHSPH 199
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
PD++IRT GE RLSDFLLWQ ++S VF P WP+++ A+ Q+
Sbjct: 200 PDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLCEAILQFQ 248
>gi|301755046|ref|XP_002913352.1| PREDICTED: dehydrodolichyl diphosphate synthase-like [Ailuropoda
melanoleuca]
Length = 334
Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats.
Identities = 82/229 (35%), Positives = 126/229 (55%), Gaps = 3/229 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IMDGN R+A + R GH +G E + +GI +T++AFS
Sbjct: 20 IKAGPMPKHIAFIMDGNRRYARKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSF---LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R SE+ L+ L + L + L+K+ + +RV+G+ L D+ ++ +A
Sbjct: 80 IENFKRSKSEVDGLMDLARQKFSRLMEEQEKLQKHGVCIRVLGDLHLLPLDLQELIAQAV 139
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T+ L + F Y+SR EIS A++ + +E G + DV SL+ K L T+ P
Sbjct: 140 QATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDVSESLLDKCLYTNHSPQ 199
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
PD++IRT GE RLSDFLLWQ ++S VF P WP+++ A+ QY
Sbjct: 200 PDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLCEAILQYQ 248
>gi|58585061|ref|YP_198634.1| undecaprenyl pyrophosphate synthase [Wolbachia endosymbiont strain
TRS of Brugia malayi]
gi|58419377|gb|AAW71392.1| Undecaprenyl pyrophosphate synthase [Wolbachia endosymbiont strain
TRS of Brugia malayi]
Length = 231
Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats.
Identities = 97/233 (41%), Positives = 129/233 (55%), Gaps = 8/233 (3%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P H+ IIMDGN RWA ++G + G+RKG EV +I + I LT++AFS+ N
Sbjct: 5 ESLPKHLAIIMDGNSRWANSQGRVKIDGYRKGSEVAYDIAKHCIALAIPYLTLYAFSMEN 64
Query: 68 WRRPVSEISELVKLIKSFL--KKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
W RP E L L S L + NIK+ +GN L IL +KE+E+ TR
Sbjct: 65 WLRPKEETDCLFDLFYSILTDRDKVNFFHNYNIKLNFVGNLSLLPGKILNQIKESEEMTR 124
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N GL L +A +Y ++ EI A++NI + V K+L T D+P DL+
Sbjct: 125 KNDGLLLTVAVSYGAKQEIIHAVRNITRK------NIDCVSEDEFEKFLYTKDLPKLDLL 178
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
IRTGGEKRLS+FLLWQ AY+E F WPDFS + AL Y R++R+G
Sbjct: 179 IRTGGEKRLSNFLLWQAAYAELYFCDTLWPDFSCQDLSKALEDYTKREKRYGR 231
>gi|73950553|ref|XP_854980.1| PREDICTED: similar to dehydrodolichyl diphosphate synthase isoform
a [Canis familiaris]
Length = 334
Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats.
Identities = 81/229 (35%), Positives = 125/229 (54%), Gaps = 3/229 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IMDGN R+A + R GH +G E + +GI +T++AFS
Sbjct: 20 IKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSF---LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R SE+ L+ L + L + L+K+ + +RV+G+ L D+ ++ +A
Sbjct: 80 IENFKRSKSEVDGLMDLARQKFSRLMEEQEKLQKHGVCIRVLGDLHLLPLDLQELIAQAV 139
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T+ L + F Y+SR EIS A++ + +E G + DV SL+ K L T+ P
Sbjct: 140 RATKHYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDVSESLLDKCLYTNHSPH 199
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
PD++IRT GE RLSDFLLWQ ++ VF P WP+++ A+ QY
Sbjct: 200 PDILIRTSGEVRLSDFLLWQTSHCCLVFQPVLWPEYTFWNLCEAILQYQ 248
>gi|111221454|ref|YP_712248.1| undecaprenyl pyrophosphate synthetase [Frankia alni ACN14a]
gi|111148986|emb|CAJ60666.1| undecaprenyl pyrophosphate synthetase (di-trans,
poly-cis-decaprenylcistransferase) [Frankia alni ACN14a]
Length = 265
Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats.
Identities = 94/236 (39%), Positives = 143/236 (60%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ S P H+GI+MDGNGRWA RGL R GH G + + V A E+G++ L+++AF
Sbjct: 25 ALPRSLVPRHVGIVMDGNGRWAKRRGLARTKGHEAGEDALFDCVEGAIELGVRWLSVYAF 84
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E++ L++ + + ++VR G R L +++ L+ +E++
Sbjct: 85 STENWKRSPDEVAFLMRFTDGVFGRRIADMDALGVRVRWAGRRPRLWGNVIRRLESSEER 144
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
TR N L L + NY R EI+ A I +D+ G + + +D + +++YLD D+PD D
Sbjct: 145 TRDNDRLTLVMCVNYGGRAEIADAAAAIARDVREGRLRADRIDEATVSRYLDEPDMPDLD 204
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
L+IRT GE+RLS+FLLWQ AY+EF F+ WPDF R + A +Y RDRR+GG+
Sbjct: 205 LVIRTSGEQRLSNFLLWQAAYAEFSFVETLWPDFDRRNLWQACEEYARRDRRYGGI 260
>gi|157964508|ref|YP_001499332.1| undecaprenyl pyrophosphate synthetase [Rickettsia massiliae MTU5]
gi|157844284|gb|ABV84785.1| Undecaprenyl pyrophosphate synthetase [Rickettsia massiliae MTU5]
Length = 235
Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats.
Identities = 84/227 (37%), Positives = 124/227 (54%), Gaps = 6/227 (2%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGN RWA + + GH+ G + E++ + I +T++ FS NW+R
Sbjct: 14 KHLAIIMDGNARWADRHNVTKSEGHKAGADKIRELLPEFINLNIPYITLYTFSSENWQRS 73
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
+E+ L+KL+ +LK +L KN +K++VIG L + + A + T+ N +
Sbjct: 74 STEVDFLIKLLSIYLKTELNTLHKNGVKLKVIGRLNLLSIALQKQINNAIELTKNNNKIT 133
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L IAF+Y SR EI A I + S I L ++PD DL+IR GG
Sbjct: 134 LCIAFSYGSRQEIVDACTTIITSGKKAVSDSD------IQHALYDPEMPDVDLLIRPGGV 187
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R+S+FLLWQ AY+E F P+YWPDF+++ A+N Y+ R R FG
Sbjct: 188 YRISNFLLWQAAYAELYFSPKYWPDFNKDDIQEAINDYSKRKRTFGK 234
>gi|94984129|ref|YP_603493.1| undecaprenyl diphosphate synthase [Deinococcus geothermalis DSM
11300]
gi|94554410|gb|ABF44324.1| undecaprenyl diphosphate synthase [Deinococcus geothermalis DSM
11300]
Length = 276
Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats.
Identities = 86/237 (36%), Positives = 124/237 (52%), Gaps = 6/237 (2%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
P H+G+I+DGN R+A A G+ R GH G++ +E++ E+GI +TI+ S +N
Sbjct: 40 GRLPRHLGLILDGNRRYARALGVEREMGHEFGVDKAHEVLQWCLELGIPAVTIWVLSTDN 99
Query: 68 WRRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
R +E+ L+ L + + N ++VR IG ++L L+E E++T
Sbjct: 100 TGRDPAEVRHLMALFDREARNLARDPRIHANRVRVRAIGQHQGFPGNVLEALRELEEKTA 159
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLDTSDVPD 181
G+ L IA Y R+EI A+K + + DV I+ +L T+ PD
Sbjct: 160 EYNGMLLNIAVGYGGREEIVDAVKQHLAEQAAAGASLEDVIAALKPEHISAHLYTAGTPD 219
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PD IIRT GE RLS F+LWQ YSE+ F YWP F R F AL + R+RRFG
Sbjct: 220 PDFIIRTSGEIRLSGFMLWQSVYSEYYFCDVYWPGFRRVDFLRALRDFQGRERRFGK 276
>gi|304320070|ref|YP_003853713.1| hypothetical protein PB2503_02477 [Parvularcula bermudensis
HTCC2503]
gi|303298973|gb|ADM08572.1| hypothetical protein PB2503_02477 [Parvularcula bermudensis
HTCC2503]
Length = 256
Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats.
Identities = 103/238 (43%), Positives = 152/238 (63%), Gaps = 10/238 (4%)
Query: 2 VASMMSSSPP----------DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAA 51
+A M++S P H+ IIMDGNGRWA G+ R GH++G+E V AA
Sbjct: 9 LAQRMAASMPGAGDEEEKSLRHVAIIMDGNGRWAKKHGVSRLRGHQEGMEAARRAVEAAK 68
Query: 52 EVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDD 111
++G+ +LT+++FS NW RP E+ L+ L++ F +K L + I+VR+IG+R +L +
Sbjct: 69 DLGLSHLTLYSFSTENWNRPEWEVRHLMGLLRQFFEKDLADLVEEGIRVRIIGDRRTLPN 128
Query: 112 DILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIA 171
DI ++++AE QT N G L IAFNY RDE+ RA+ ++ + + SG++ +D +I
Sbjct: 129 DIREMVEQAERQTADNKGYTLQIAFNYGGRDELVRAVSSLAEQVASGTLDVEAIDERVIG 188
Query: 172 KYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQY 229
LDT++ PDPDL+IRT GE+RLS+FLLWQ AYSEF+F+ WPDF F A++ Y
Sbjct: 189 DTLDTANAPDPDLVIRTSGEQRLSNFLLWQAAYSEFIFMDCLWPDFDEAAFREAVDIY 246
>gi|291399523|ref|XP_002716147.1| PREDICTED: dehydrodolichyl diphosphate synthase [Oryctolagus
cuniculus]
Length = 334
Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats.
Identities = 83/229 (36%), Positives = 126/229 (55%), Gaps = 3/229 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IMDGN R+A + R GH +G E + +GI +T++AFS
Sbjct: 20 IKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSF---LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R SE+ L+ L + L + L+K+ + +RV+G+ L D+ ++ +A
Sbjct: 80 IENFKRSKSEVDGLMDLARQKFSRLMEEQEKLQKHGVCIRVLGDLHLLPLDLQELIAQAV 139
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T+ L + F Y+SR EIS A+K + +E G + DV SL+ K L TS P
Sbjct: 140 RATKNYNKCFLNVCFAYTSRHEISNAVKEMAWGVEQGLLDPSDVSESLLDKCLYTSHSPH 199
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
PD++IRT GE RLSDFLLWQ ++S VF P WP+++ A+ Q+
Sbjct: 200 PDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLCEAILQFQ 248
>gi|51473613|ref|YP_067370.1| bactoprenyl-diphosphate synthase [Rickettsia typhi str. Wilmington]
gi|73920274|sp|Q68WV4|UPPS_RICTY RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|51459925|gb|AAU03888.1| Bactoprenyl-diphosphate synthase [Rickettsia typhi str. Wilmington]
Length = 226
Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats.
Identities = 85/227 (37%), Positives = 127/227 (55%), Gaps = 6/227 (2%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGN RWA L + GH+ G + E++ + I +T++ FS NW+R
Sbjct: 5 KHLAIIMDGNARWADQHNLTKSEGHKAGADKIRELLPEFINLNIPYITLYTFSSENWQRS 64
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE++ L+KL+ +LK SL +N +K++VIG L + + A + T+ N +
Sbjct: 65 SSEVNFLIKLLSLYLKNELDSLHENGVKIKVIGRLNLLRSSLQKQINNAIELTQNNNKIK 124
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L IAF+Y SR EI A I + + V + I L ++PD DL+IR+GG
Sbjct: 125 LCIAFSYGSRQEIVDACTKIIANGKK------QVSENDIQHALYDPEMPDVDLLIRSGGV 178
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R+S+FLLWQ AY+E F +YWPDF+++ A+N Y+ R R FG
Sbjct: 179 YRISNFLLWQAAYAELYFSQKYWPDFNKDDIHEAINDYSKRKRTFGK 225
>gi|227501561|ref|ZP_03931610.1| undecaprenyl pyrophosphate synthetase [Corynebacterium accolens
ATCC 49725]
gi|227077586|gb|EEI15549.1| undecaprenyl pyrophosphate synthetase [Corynebacterium accolens
ATCC 49725]
Length = 249
Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats.
Identities = 82/243 (33%), Positives = 124/243 (51%), Gaps = 7/243 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLT 59
+V + P H+ I+ DGN RWA G GHR+G + E++A + I+ +T
Sbjct: 9 LVRLIKGRPQPKHVAIMADGNRRWAREAGFTDISHGHRQGAKKIGEMIAWCRDTDIEVVT 68
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
I+ S N +R E+ L +I + S + +VR++GN L + + +
Sbjct: 69 IYLLSTENLKRSQQEVQLLFDIISDVVTHL--SRGDLDCQVRLVGNLDLLPAPVTQRMVD 126
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCS----HDVDSSLIAKYLD 175
A ++T+ N G+ + +A Y R EI A++ + + + V + I ++L
Sbjct: 127 AAEETKDNQGVIVNVAVGYGGRQEIVDAVQKLVRSEAEKGTSAAEMAERVTADSITEHLY 186
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
T +PDPDL+IRT GE+RLS FLLWQ AYSE F YWP F + F AL Y+ R RR
Sbjct: 187 TKGLPDPDLVIRTSGEQRLSGFLLWQAAYSEIWFTDTYWPAFRKVDFLRALRDYSQRSRR 246
Query: 236 FGG 238
FG
Sbjct: 247 FGK 249
>gi|10434964|dbj|BAB14439.1| unnamed protein product [Homo sapiens]
Length = 334
Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats.
Identities = 81/229 (35%), Positives = 128/229 (55%), Gaps = 3/229 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IMDGN R+A + R GH +G E + +GI +T++AFS
Sbjct: 20 IKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSF---LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R SE+ L+ L + L + L+K+ + +RV+G+ L D+ ++ +A
Sbjct: 80 IENFKRSKSEVDGLMDLARQKFSRLMEEKEKLQKHGVCIRVLGDLHLLPLDLQELIAQAV 139
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T+ L++ F Y+SR EIS A++ + +E G + D+ SL+ K L T+ P
Sbjct: 140 QATKNYNKCFLYVCFAYTSRHEISNAVREMAWGVEQGLLDPSDISESLLDKCLYTNRSPH 199
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
PD++IRT GE RLSDFLLWQ ++S VF P WP+++ F A+ Q+
Sbjct: 200 PDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQ 248
>gi|184200937|ref|YP_001855144.1| undecaprenyl pyrophosphate synthase [Kocuria rhizophila DC2201]
gi|183581167|dbj|BAG29638.1| undecaprenyl pyrophosphate synthase [Kocuria rhizophila DC2201]
Length = 263
Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats.
Identities = 87/234 (37%), Positives = 136/234 (58%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P H+ ++MDGNGRWA RGLPR GHR G ++VA A ++GI ++ +AFS
Sbjct: 19 LDPALLPRHVALVMDGNGRWANERGLPRTEGHRAGERALMDVVAGAIDLGIPYVSAYAFS 78
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+R SE++ L+ + + + ++ I++R G R L ++ L+ AE +T
Sbjct: 79 TENWKRSPSEVAFLMNFTGDVMARQLLTFQEWGIRIRWAGRRPRLWGSVIKRLETAERET 138
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NT L L + NY R EI+ A + +D G + + + +YLD +PD D+
Sbjct: 139 QDNTVLTLTMCVNYGGRAEIADAAAAMARDAREGRLKPGSITEDTVQQYLDEPTLPDVDM 198
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+R+ GE+RLS+F+LWQ AY+E VF+ WPD R + + A+ Y RDRR+GG
Sbjct: 199 FLRSSGEQRLSNFMLWQSAYAELVFLDVLWPDMDRRVLWQAVQDYVERDRRYGG 252
>gi|166157941|ref|NP_001107380.1| dehydrodolichyl diphosphate synthase [Xenopus (Silurana)
tropicalis]
gi|163915444|gb|AAI57267.1| LOC100135207 protein [Xenopus (Silurana) tropicalis]
gi|213624533|gb|AAI71230.1| hypothetical protein LOC100135207 [Xenopus (Silurana) tropicalis]
gi|213627802|gb|AAI71232.1| hypothetical protein LOC100135207 [Xenopus (Silurana) tropicalis]
Length = 332
Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats.
Identities = 81/234 (34%), Positives = 131/234 (55%), Gaps = 4/234 (1%)
Query: 1 MVASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ A+++ + P P H+ IMDGN R+A + R GH +G E E + +GI +T
Sbjct: 15 LCANVLKAGPIPKHVAFIMDGNRRYAKKCHVERQEGHSQGFEKLAETLRWCLNLGICEVT 74
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCV 116
++AFSI N++R E+ L++L + + LKK+ + +RV+G+ L DI +
Sbjct: 75 VYAFSIENFKRSAEEVEGLMELARQKFARLLEEKDKLKKHGVCIRVLGDMTLLPLDIQKL 134
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT 176
+ +A +T+ + L + F Y+SR EIS AI+ ++ G + DV SL+ + L T
Sbjct: 135 IAQAVLETKDYSTCFLNVCFAYTSRHEISNAIREAAWGVQEGLLDPRDVSESLLDQCLYT 194
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
+ +PDL+IRT GE RLSDFLLWQ ++S VF WP+++ A+ +Y
Sbjct: 195 AKSLEPDLLIRTSGEVRLSDFLLWQTSHSCLVFQSVLWPEYTFWNLCEAILRYQ 248
>gi|325962612|ref|YP_004240518.1| undecaprenyl pyrophosphate synthetase [Arthrobacter
phenanthrenivorans Sphe3]
gi|323468699|gb|ADX72384.1| Undecaprenyl pyrophosphate synthetase [Arthrobacter
phenanthrenivorans Sphe3]
Length = 257
Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats.
Identities = 80/242 (33%), Positives = 124/242 (51%), Gaps = 7/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + S P HIG+++DGN RWA P GH+ G + +E + E+G+K +T+
Sbjct: 19 LLKDLARDSIPQHIGVMVDGNRRWAKQFNAPTSQGHQAGADKIHEFLGWCQELGVKVVTL 78
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N R E+ L+ +I + L + NI V +G L D + L +
Sbjct: 79 YMLSTDNMNRSSEELDLLMGIIANTLDRLDE---DENISVHAMGAPELLPDYLADRLNKL 135
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVC----SHDVDSSLIAKYLDT 176
+T + +++ +A Y R EI A++ + D + + ++ I+++L T
Sbjct: 136 TARTPVTENIHVNVAVGYGGRREIVDAVRELLHDAVARGADISALADELTVDDISRFLYT 195
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
PDPDL+IRT GE+RLS FL+WQ AYSEF F WP F + F AL Y R RRF
Sbjct: 196 RGQPDPDLVIRTSGEQRLSGFLMWQSAYSEFYFCEALWPAFRKVDFLRALRDYAGRQRRF 255
Query: 237 GG 238
G
Sbjct: 256 GA 257
>gi|170031397|ref|XP_001843572.1| dehydrodolichyl diphosphate synthase [Culex quinquefasciatus]
gi|167869832|gb|EDS33215.1| dehydrodolichyl diphosphate synthase [Culex quinquefasciatus]
Length = 317
Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats.
Identities = 82/244 (33%), Positives = 131/244 (53%), Gaps = 3/244 (1%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + + P H+ IMDGN R+A + + GH KG + +E + ++GI+ +T++
Sbjct: 27 IRVLKAGPIPQHVAFIMDGNRRFAQKENIAKAEGHSKGFDKLSETLQWCQDIGIREVTVY 86
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKK---GFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
AFSI N++R E+ L+ L + +K L + I +R+IGN L +DI L
Sbjct: 87 AFSIENFKRTKEEVDTLMSLAREKFRKLLEERDKLHERGICIRIIGNTALLPEDIQRFLA 146
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
EA TR NT L +AF+Y+SRDE++ +I+ + + G + D+D L+++ + T
Sbjct: 147 EAVLITRNNTKAFLNVAFSYTSRDEMAHSIRTVAEGFAQGKLQQDDIDEELLSRCMYTKH 206
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+PDL++RT GE RLSDFL WQ + F WPDF+ F A+ Y + G
Sbjct: 207 GTNPDLLVRTSGEVRLSDFLTWQSESTVIYFTETLWPDFNVWQLFGAVFYYQRCHWQLGA 266
Query: 239 LSKK 242
K+
Sbjct: 267 GGKR 270
>gi|328948073|ref|YP_004365410.1| Undecaprenyl pyrophosphate synthase [Treponema succinifaciens DSM
2489]
gi|328448397|gb|AEB14113.1| Undecaprenyl pyrophosphate synthase [Treponema succinifaciens DSM
2489]
Length = 237
Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats.
Identities = 97/231 (41%), Positives = 143/231 (61%), Gaps = 4/231 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P H+GIIMDGNGRWA R L R GH +G++ EI AA+++G+K LT + FS NW
Sbjct: 9 ALPVHVGIIMDGNGRWAKKRNLLRTNGHTEGLKRAKEIAKAASDIGLKFLTFYVFSTENW 68
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+R E+ L+ LI S+L K F K NN++VR++G++ L +++ + + E T T
Sbjct: 69 KRTEQEVGFLMNLIHSYLLKEFDFCKYNNVRVRMLGDKSRLPENVRKDINQIEKDTENLT 128
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL + +A NY RDEI R +K + + ++ S S + S D ++PD DL+IRT
Sbjct: 129 GLTICLAINYGGRDEIIRGVKKLIAEGKTESEISEESISKSF----DVPELPDVDLLIRT 184
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GGEKRLS+FL+W AY+E +F WPD+ +E FF + ++ R RRFG +
Sbjct: 185 GGEKRLSNFLMWHSAYAELLFSDTLWPDYYKEEFFKDIGEFQKRSRRFGAV 235
>gi|116666971|pdb|2D2R|A Chain A, Crystal Structure Of Helicobacter Pylori Undecaprenyl
Pyrophosphate Synthase
gi|116666972|pdb|2D2R|B Chain B, Crystal Structure Of Helicobacter Pylori Undecaprenyl
Pyrophosphate Synthase
gi|151566470|pdb|2DTN|A Chain A, Crystal Structure Of Helicobacter Pylori Undecaprenyl
Pyrophosphate Synthase Complexed With Pyrophosphate
gi|151566471|pdb|2DTN|B Chain B, Crystal Structure Of Helicobacter Pylori Undecaprenyl
Pyrophosphate Synthase Complexed With Pyrophosphate
Length = 245
Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats.
Identities = 86/230 (37%), Positives = 136/230 (59%), Gaps = 1/230 (0%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 17 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 76
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE+ L+K++K +LK + NNI+ R IG+ ++ + + E+ TR
Sbjct: 77 KSEVDFLMKMLKKYLKDERSTYLDNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 136
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+A NY S++E+SRA K++ + S +++ I+ LDT ++P+ DL++RTGGE
Sbjct: 137 QVLALNYGSKNELSRAFKSLLESPPSNISLLESLENE-ISNRLDTRNLPEVDLLLRTGGE 195
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 196 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELKA 245
>gi|306835719|ref|ZP_07468725.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
accolens ATCC 49726]
gi|304568437|gb|EFM43996.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
accolens ATCC 49726]
Length = 256
Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats.
Identities = 82/243 (33%), Positives = 124/243 (51%), Gaps = 7/243 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLT 59
+V + P H+ I+ DGN RWA G GHR+G + E++A + I+ +T
Sbjct: 16 LVRLIKGRPQPKHVAIMADGNRRWAREAGFTDISHGHRQGAKKIGEMIAWCRDTDIEVVT 75
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
I+ S N +R E+ L +I + S + +VR++GN L + + +
Sbjct: 76 IYLLSTENLKRSQQEVQLLFDIISDVVTHL--SRGDLDCQVRLVGNLDLLPAPVTQRMVD 133
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCS----HDVDSSLIAKYLD 175
A ++T+ N G+ + +A Y R EI A++ + + + V + I ++L
Sbjct: 134 AAEETKDNQGVIVNVAVGYGGRQEIVDAVQKLVRSEAEKGTSAAEMAERVTADSITEHLY 193
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
T +PDPDL+IRT GE+RLS FLLWQ AYSE F YWP F + F AL Y+ R RR
Sbjct: 194 TKGLPDPDLVIRTSGEQRLSGFLLWQAAYSEIWFTDTYWPAFRKVDFLRALRDYSQRSRR 253
Query: 236 FGG 238
FG
Sbjct: 254 FGK 256
>gi|213965509|ref|ZP_03393704.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
amycolatum SK46]
gi|213951893|gb|EEB63280.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
amycolatum SK46]
Length = 261
Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats.
Identities = 85/243 (34%), Positives = 124/243 (51%), Gaps = 7/243 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGL-PRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ + P H+ I+ DGN RWA G GHR G E V AE I+ +T
Sbjct: 21 LAQELEGKPRPKHVAIMADGNRRWAREAGFTDVSHGHRVGSRKIAEFVGWCAEQEIELVT 80
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
I+ S N R E+ L +I + + S ++++R++G+ L + + L+
Sbjct: 81 IYLLSTENLGRDPEELELLFDIIADVVDELAQSPN--DVRLRMVGHLELLPERMTTRLRH 138
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVC----SHDVDSSLIAKYLD 175
E+ T NTG+ + IA Y R EI A++ I ++ + + + + I++ L
Sbjct: 139 DEEVTANNTGIQVNIAVGYGGRQEIVDAVRKIIRESVAEGIDASELEERITTDAISRRLY 198
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
TS PDPDL+IRT GE+RLS FLLWQ AYSE F YWP+F R F AL ++ R RR
Sbjct: 199 TSGQPDPDLVIRTSGEQRLSGFLLWQTAYSEIWFTDTYWPEFRRIDFLRALRDFSQRSRR 258
Query: 236 FGG 238
FG
Sbjct: 259 FGK 261
>gi|308184966|ref|YP_003929099.1| undecaprenyl pyrophosphate synthase [Helicobacter pylori SJM180]
gi|308060886|gb|ADO02782.1| undecaprenyl pyrophosphate synthase [Helicobacter pylori SJM180]
Length = 234
Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats.
Identities = 85/229 (37%), Positives = 131/229 (57%), Gaps = 1/229 (0%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE+ L+K++K +LK + NNI+ R IG+ ++ + E TR
Sbjct: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILRLESDTRHFKDFT 125
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+A NY S++E+SRA + ++ + + I+ LDT D+P+ DL++RTGGE
Sbjct: 126 QVLALNYGSKNELSRA-FKSLLENPPNNMDPLESLENEISHRLDTHDLPEVDLLLRTGGE 184
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELK 233
>gi|115627881|ref|XP_796039.2| PREDICTED: similar to dehydrodolichyl diphosphate synthase
[Strongylocentrotus purpuratus]
gi|115929439|ref|XP_001194130.1| PREDICTED: similar to dehydrodolichyl diphosphate synthase
[Strongylocentrotus purpuratus]
Length = 334
Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats.
Identities = 79/232 (34%), Positives = 122/232 (52%), Gaps = 3/232 (1%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + P H+ IMDGN R+A + + GH G E E + ++GI +T++
Sbjct: 40 LRVLKCGPVPQHVAFIMDGNRRFAKKKSVQTLEGHSLGFEKLAETLQWCLDLGITEVTVY 99
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLK 118
AFSI N++R E+ L++L + + + K+ + V+VIG+ L D+ V+
Sbjct: 100 AFSIENFKRSRQEVDGLMELARKKFLRLLEEKDQIMKHGVCVQVIGDLNLLPRDVQEVVA 159
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
EA +R NT L + Y+SR E++ A+K + +E G + DV L+ + L T
Sbjct: 160 EAMFISRNNTRATLNVCLAYTSRQEMANAVKEVALGVEEGILEPSDVSEELLEECLYTHR 219
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
DP+L++RT GE RLSDFLLWQ YS F+ WP+FS F A+ Y
Sbjct: 220 CKDPELLVRTSGEVRLSDFLLWQSGYSVLSFVEVLWPEFSIWHLFAAVLHYQ 271
>gi|295835212|ref|ZP_06822145.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. SPB74]
gi|197698197|gb|EDY45130.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. SPB74]
Length = 251
Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats.
Identities = 87/241 (36%), Positives = 132/241 (54%), Gaps = 5/241 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A+ + P H+ +MDGNGRWA R LPR AGHR +++ AA G++ L+++A
Sbjct: 8 AAAPTGRGPRHVACVMDGNGRWAQRRSLPRTAGHRAAEATVIDVIEAARSAGVEWLSLYA 67
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS-LDDDILCVLKEAE 121
FS NW RP +E+ L+ L++ ++K L I+ RV+G L + +
Sbjct: 68 FSTENWSRPDAEVGYLMDLVRHTVRKHAPLLHARGIRCRVLGADDPRLPAPLARDFADLA 127
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T N + L +AF++ R +I A +++ V + +V A +L D PD
Sbjct: 128 TLTAGNRRMTLTVAFDHGGRGDIVAAARSLI----RAGVPADEVTERAFAAHLPFPDTPD 183
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRT GE+R+S+F+LWQVAY+E+VF WPDF F L+ Y R+RRFGG+
Sbjct: 184 VDLVIRTSGEQRISNFMLWQVAYAEWVFPTVLWPDFRAPHFLECLHHYRHRERRFGGVPA 243
Query: 242 K 242
+
Sbjct: 244 Q 244
>gi|108563588|ref|YP_627904.1| undecaprenyl pyrophosphate synthase [Helicobacter pylori HPAG1]
gi|107837361|gb|ABF85230.1| putative undecaprenyl pyrophosphate synthase [Helicobacter pylori
HPAG1]
Length = 234
Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats.
Identities = 87/229 (37%), Positives = 136/229 (59%), Gaps = 1/229 (0%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE+ L+K++K +LK + NNI+ R IG+ ++ + + E+ TR
Sbjct: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+A NY S++E+SRA K++ + S +++ I+ LDT D+P+ DL++RTGGE
Sbjct: 126 QVLALNYGSKNELSRAFKSLLESPPSHISLLESLENE-ISNRLDTHDLPEVDLLLRTGGE 184
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELK 233
>gi|296136575|ref|YP_003643817.1| undecaprenyl diphosphate synthase [Thiomonas intermedia K12]
gi|295796697|gb|ADG31487.1| undecaprenyl diphosphate synthase [Thiomonas intermedia K12]
Length = 245
Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats.
Identities = 94/240 (39%), Positives = 145/240 (60%), Gaps = 7/240 (2%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+A S+ P H+ ++MDGNGRWA R LPR +GH+ G++ +IV AE+G+K+LT+F
Sbjct: 6 IAKRDPSTLPRHVAVVMDGNGRWAQRRFLPRSSGHKFGVDALKKIVRHCAEIGVKHLTVF 65
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+ L+ L L++ L + +++ V+G+ + ++ ++ ++E
Sbjct: 66 AFSSENWARPAEEVQTLMDLFVKALQRESAELARQGVQLHVVGDLSAFSAEMRALIDQSE 125
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
TR N L L +A NY R ++++A + +F E+ +A++L S PD
Sbjct: 126 ALTRQNDTLVLNVALNYGGRWDMTQAAQALFAAQEAP-------TQQALARHLALSHSPD 178
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL+IRTGGE R+S+FLLWQ+AY+E F WPDF+ E F AL + R RRFGG+ +
Sbjct: 179 PDLLIRTGGEHRISNFLLWQLAYTELYFSDILWPDFNAEAFDAALADFASRQRRFGGVPE 238
>gi|269976420|ref|ZP_06183405.1| di-trans,poly-cis-decaprenylcistransferase [Mobiluncus mulieris
28-1]
gi|307701420|ref|ZP_07638439.1| di-trans,poly-cis-decaprenylcistransferase [Mobiluncus mulieris
FB024-16]
gi|269935221|gb|EEZ91770.1| di-trans,poly-cis-decaprenylcistransferase [Mobiluncus mulieris
28-1]
gi|307613330|gb|EFN92580.1| di-trans,poly-cis-decaprenylcistransferase [Mobiluncus mulieris
FB024-16]
Length = 269
Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats.
Identities = 91/231 (39%), Positives = 132/231 (57%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S H+ IIMDGNGRWA A+GL R AGH G + +A A G+K L+++AFS N
Sbjct: 33 SGVVSHVAIIMDGNGRWANAQGLNRTAGHEAGEYALMDTIAGAVAAGVKYLSVYAFSTEN 92
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
WRR +E+ L+ + L+ L + ++VR G L +L L+ AE TR N
Sbjct: 93 WRRSPAEVKFLMGYSRRVLRARRDELNRWGVRVRWSGREGRLWKSVLAELRAAEALTRDN 152
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+G+ L + NY R E++ A + + + + + + +V +A+ L DVPD DL+IR
Sbjct: 153 SGMQLIMCVNYGGRAELADAARAVAARVATREIRAENVTEKTLARELYLPDVPDVDLLIR 212
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
T GE+R S+FL WQ AY+E VF PE WP+++RE + L + R RRFG
Sbjct: 213 TSGEQRTSNFLPWQAAYAELVFAPEPWPEYNRETLWRDLLAFQSRQRRFGR 263
>gi|225706224|gb|ACO08958.1| Dehydrodolichyl diphosphate synthase [Osmerus mordax]
Length = 350
Score = 251 bits (642), Expect = 6e-65, Method: Composition-based stats.
Identities = 81/235 (34%), Positives = 131/235 (55%), Gaps = 5/235 (2%)
Query: 1 MVASMMSSSP--PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNL 58
+ A+++ + P P H+ IMDGN R+A + + R GH +G + E + + I +
Sbjct: 15 LSANILMAGPSMPKHVAFIMDGNRRYARKQHVERQDGHTQGFDKLAETLRWCLHLNIPEV 74
Query: 59 TIFAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILC 115
T++AFSI N++R E+ L++L K K L+K+ + +RV+G+ L D+
Sbjct: 75 TVYAFSIENFKRSKEEVDGLMELAKQKFLKLLEEQENLEKHGVCIRVLGDLNMLPLDLQQ 134
Query: 116 VLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD 175
+ A TR + L + F Y+SR EI+ A++ + +E G + S DV L+++ L
Sbjct: 135 AIARAVVSTRTHNKCFLNVCFAYTSRYEITNAVREMAWGVEQGLLKSSDVSEGLLSQCLY 194
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
+ + P+PDL+IRT GE RLSDFLLWQ ++S VF WP++S A+ QY
Sbjct: 195 SRNSPNPDLLIRTSGEVRLSDFLLWQTSHSCLVFQTVLWPEYSFWNLCEAILQYQ 249
>gi|208435115|ref|YP_002266781.1| putative undecaprenylpyrophosphate synthase [Helicobacter pylori
G27]
gi|208433044|gb|ACI27915.1| putative undecaprenylpyrophosphate synthase [Helicobacter pylori
G27]
Length = 234
Score = 251 bits (642), Expect = 6e-65, Method: Composition-based stats.
Identities = 85/229 (37%), Positives = 132/229 (57%), Gaps = 1/229 (0%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE+ L+K++K +LK + NNI+ R IG+ ++ + + E+ TR
Sbjct: 66 KSEVDFLMKMLKKYLKDERSTYLDNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+A NY S++E+SRA + + + + I+ LDT D+P+ DL++RTGGE
Sbjct: 126 QVLALNYGSKNELSRA-FKSLLESPPSHINPLESLENEISNRLDTHDLPEVDLLLRTGGE 184
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELK 233
>gi|207092139|ref|ZP_03239926.1| hypothetical protein HpylHP_03835 [Helicobacter pylori
HPKX_438_AG0C1]
Length = 234
Score = 251 bits (642), Expect = 6e-65, Method: Composition-based stats.
Identities = 88/229 (38%), Positives = 137/229 (59%), Gaps = 1/229 (0%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE+ L+K++K +LK ++ NNI+ R IG+ ++ + + E+ TR
Sbjct: 66 KSEVDFLMKMLKKYLKDERFTYLDNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+A NY S++EISRA K++ + S +++ I+ LDT D+P+ DL++RTGGE
Sbjct: 126 QVLALNYGSKNEISRAFKSLLESPPSHISLLESLENE-ISNRLDTRDLPEVDLLLRTGGE 184
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELK 233
>gi|306818300|ref|ZP_07452029.1| di-trans,poly-cis-decaprenylcistransferase [Mobiluncus mulieris
ATCC 35239]
gi|304648945|gb|EFM46241.1| di-trans,poly-cis-decaprenylcistransferase [Mobiluncus mulieris
ATCC 35239]
Length = 274
Score = 251 bits (642), Expect = 6e-65, Method: Composition-based stats.
Identities = 90/226 (39%), Positives = 132/226 (58%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA A+GL R AGH G + +A A G+K L+++AFS NWRR
Sbjct: 38 HVAIIMDGNGRWANAQGLNRTAGHEAGEYALMDTIAGAVAAGVKYLSVYAFSTENWRRSP 97
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+E+ L+ + L+ L + ++VR G L +L L+ AE TR N+G+ L
Sbjct: 98 AEVKFLMGYSRRVLRARRDELNRWGVRVRWSGREGRLWKSVLAELRAAEALTRDNSGMQL 157
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+ NY R E++ A + + + + + + +V +A+ L DVPD DL+IRT GE+
Sbjct: 158 IMCVNYGGRAELADAARAVAARVATREIRAENVTEKTLARELYLPDVPDVDLLIRTSGEQ 217
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R+S+FL WQ AY+E VF PE WP+++RE + L + R RRFG
Sbjct: 218 RISNFLPWQAAYAELVFAPEPWPEYNRETLWRDLLVFQSRQRRFGA 263
>gi|242048354|ref|XP_002461923.1| hypothetical protein SORBIDRAFT_02g010690 [Sorghum bicolor]
gi|241925300|gb|EER98444.1| hypothetical protein SORBIDRAFT_02g010690 [Sorghum bicolor]
Length = 306
Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats.
Identities = 88/258 (34%), Positives = 131/258 (50%), Gaps = 25/258 (9%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ S P H+ ++MDGN RWA ARG+ GH G + + GI+ LT+FAFS
Sbjct: 45 IRPESLPRHVAVVMDGNRRWAQARGMLTAEGHEAGRRALEHTIWRSHAWGIRALTVFAFS 104
Query: 65 INNWRRPVS----------------------EISELVKLIKSFLKKGFYSLKKNNIKVRV 102
N+ RP + E+ ++ LI+ ++ +N I++ V
Sbjct: 105 QENFGRPKASPTRADLVLTNCSFLHSLNLKMEVDYVMGLIERTIRDNIDEYARNGIRMHV 164
Query: 103 IGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCS 162
IG+ + +EAE+ TR N+ L+L +A YS R +I RA + + +++ +
Sbjct: 165 IGDPSRRPASLQNAAREAEEMTRNNSQLHLMLATCYSGRWDIVRACRELAGEVQGNLLMP 224
Query: 163 HDVDSSLIAKYLDTS---DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSR 219
D+D SL+A L T + PDL+IRT GE RLS+FL+WQ AYSE F WPDF
Sbjct: 225 EDIDESLLASKLATGVAGEFSCPDLVIRTSGEVRLSNFLMWQSAYSELYFTDTLWPDFGE 284
Query: 220 ELFFHALNQYNLRDRRFG 237
+ AL + R+RRFG
Sbjct: 285 AEYLQALTSFQNRERRFG 302
>gi|124267164|ref|YP_001021168.1| undecaprenyl pyrophosphate synthetase [Methylibium petroleiphilum
PM1]
gi|124259939|gb|ABM94933.1| Undecaprenyl pyrophosphate synthetase [Methylibium petroleiphilum
PM1]
Length = 258
Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats.
Identities = 86/218 (39%), Positives = 130/218 (59%), Gaps = 4/218 (1%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S ++ P H+ ++MDGNGRWA+ R +PR GH++G++ V A A+ GI+ LT+FAF
Sbjct: 13 SQAPAAIPRHVAVVMDGNGRWASKRFMPRFVGHKQGVDALVRTVKACADRGIEYLTVFAF 72
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+RP E+S L+ L+ + K L K +++R++G+R ++ D + EAE
Sbjct: 73 SSENWKRPEEEVSGLMGLVLVAVSKYLAKLAKEGVRIRIVGDRDAVSDKVREAWAEAERS 132
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NT + L +AFNY R ++ +A + D + + ++ + + +Y+ S PDPD
Sbjct: 133 TAHNTRITLSVAFNYGGRWDVLQACRQAIAD----GIPADQLNEARLGQYMALSHAPDPD 188
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSREL 221
L IRTGGE R+S+FLLWQ AYSE F WPDF
Sbjct: 189 LFIRTGGEVRISNFLLWQAAYSELYFTDCLWPDFGDVE 226
>gi|15645835|ref|NP_208013.1| undecaprenyl pyrophosphate synthase [Helicobacter pylori 26695]
gi|2501567|sp|P55984|UPPS_HELPY RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|2314380|gb|AAD08263.1| conserved hypothetical protein [Helicobacter pylori 26695]
Length = 234
Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats.
Identities = 87/229 (37%), Positives = 136/229 (59%), Gaps = 1/229 (0%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE+ L+K++K +LK + NNI+ R IG+ ++ + + E+ TR
Sbjct: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+A NY S++E+SRA K++ + S +++ I+ LDT D+P+ DL++RTGGE
Sbjct: 126 QVLALNYGSKNELSRAFKSLLESPPSHINLLESLENE-ISNRLDTHDLPEVDLLLRTGGE 184
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELK 233
>gi|317013004|gb|ADU83612.1| undecaprenyl pyrophosphate synthase [Helicobacter pylori
Lithuania75]
Length = 234
Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats.
Identities = 87/229 (37%), Positives = 136/229 (59%), Gaps = 1/229 (0%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE+ L+K++K +LK + NNI+ R IG+ ++ + E+ TR
Sbjct: 66 KSEVDFLMKMLKKYLKDERSTYLDNNIRFRAIGDLEGFSKELRDTILRLENDTRHFKDFT 125
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+A NY S++E+SRA K++ ++ S +++ I+ LDT D+P+ DL++RTGGE
Sbjct: 126 QVLALNYGSKNELSRAFKSLLENPPSHINPLESLENE-ISNRLDTCDLPEVDLLLRTGGE 184
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELK 233
>gi|91205560|ref|YP_537915.1| undecaprenyl pyrophosphate synthetase [Rickettsia bellii RML369-C]
gi|91069104|gb|ABE04826.1| Undecaprenyl pyrophosphate synthetase [Rickettsia bellii RML369-C]
Length = 264
Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats.
Identities = 92/227 (40%), Positives = 134/227 (59%), Gaps = 6/227 (2%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGN RWAA LP+ GHR G + +E++ + I +T++ FS NW+R
Sbjct: 43 KHLAIIMDGNARWAATHNLPKSEGHRAGADKVHELLPEFINLKIPYITLYTFSSENWQRS 102
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
+EIS L++L+ +LKK +L KN IK++VIG L D + + A + T+ N L
Sbjct: 103 NTEISFLMRLLNIYLKKELDNLHKNGIKIKVIGRLNLLSDSLQKQINNAIELTKDNNKLT 162
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L IAF+Y SR EI+ A I ++ ++ S I L ++PD DL+IR GG
Sbjct: 163 LCIAFSYGSRQEITDACTKIIASGKT------EILESDIQNALYDPEMPDVDLLIRPGGV 216
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R+S+FLLWQ AY+E F +YWPDF++E +A++ Y+ R R FG
Sbjct: 217 FRISNFLLWQAAYAELYFSQKYWPDFNKEDIINAIDDYSKRKRTFGK 263
>gi|317011420|gb|ADU85167.1| undecaprenyl pyrophosphate synthase [Helicobacter pylori
SouthAfrica7]
Length = 235
Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats.
Identities = 85/229 (37%), Positives = 136/229 (59%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 6 KHLAIIMDGNGRWARLKNKARAYGHKKGVKTLKDITIWCANHQLECLTLYAFSTENWKRP 65
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE+ L+K++K +LK + N+I+ R IG+ ++ + + E T
Sbjct: 66 KSEVDFLMKMLKKYLKDERSTYLNNHIRFRAIGDLEGFSKELRDTILQLESDTGHFKDFT 125
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+A NY S++E+SRA K++ ++ + ++ + + I+ LDT D+P+ DL++RTGGE
Sbjct: 126 QVLALNYGSKNELSRAFKSLLENPPNNNIEPLENLENEISNRLDTHDLPEVDLLLRTGGE 185
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RLS+FLLWQ +Y+E F P WPDF+ + + +N + R R+FG L
Sbjct: 186 MRLSNFLLWQSSYAELFFTPTLWPDFTPKDLENIINDFYKRVRKFGELK 234
>gi|188528008|ref|YP_001910695.1| putative undecaprenyl pyrophosphate synthase [Helicobacter pylori
Shi470]
gi|188144248|gb|ACD48665.1| putative undecaprenyl pyrophosphate synthase [Helicobacter pylori
Shi470]
Length = 234
Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats.
Identities = 86/229 (37%), Positives = 135/229 (58%), Gaps = 1/229 (0%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE+ L+K++K +LK + NNI+ R IG+ ++ + + E+ T
Sbjct: 66 KSEVDFLMKMLKKYLKDERSTYLDNNIRFRAIGDLEGFSKELRETILQLENDTGHFKDFT 125
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+A NY S++E+SRA K++ + S +++ I+ LDT D+P+ DL++RTGGE
Sbjct: 126 QVLALNYGSKNELSRAFKSLLESPPSNISLLESLENE-ISNRLDTCDLPEVDLLLRTGGE 184
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELK 233
>gi|317014607|gb|ADU82043.1| undecaprenyl pyrophosphate synthase [Helicobacter pylori
Gambia94/24]
Length = 234
Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats.
Identities = 86/229 (37%), Positives = 134/229 (58%), Gaps = 1/229 (0%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE+ L+K++K +LK + NNI+ R IG+ ++ + E TR
Sbjct: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILRLESDTRHFKDFT 125
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+A NY S++E+SRA K++ + + +++ I+ LDT D+P+ DL++RTGGE
Sbjct: 126 QVLALNYGSKNELSRAFKSLLESPPNHINNIESLENE-ISHRLDTHDLPEVDLLLRTGGE 184
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELK 233
>gi|33519741|ref|NP_878573.1| undecaprenyl pyrophosphate synthetase [Candidatus Blochmannia
floridanus]
gi|42559771|sp|Q7VRE1|UPPS_BLOFL RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|33504086|emb|CAD83347.1| undecaprenyl pyrophosphate synthetase [Candidatus Blochmannia
floridanus]
Length = 250
Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats.
Identities = 96/237 (40%), Positives = 138/237 (58%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + S+ P HI IIMDGNGRWA RG R GH+ G + V A LT++
Sbjct: 10 IQPLSSAILPRHIAIIMDGNGRWARGRGKLRIVGHQAGFQAARRAVRFAVHCRFNALTLY 69
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW R +EIS L++L L +L KNNIK+R+IG+ ++ + +E
Sbjct: 70 AFSSENWTRSNTEISSLMQLFIYALNSEINNLNKNNIKLRIIGDVNRFTQELQDCIYRSE 129
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T N GLNL IA NY R +I + +K I I+ G + + ++ +++ KY+ +++
Sbjct: 130 QLTSNNNGLNLNIAANYGGRWDIVQGVKKIIAQIQKGVLKPNQINENILCKYVCMNELSP 189
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DL+IRTGGE R+S+FLLWQ+AY+E F WPDF+ +F AL+ + RDRRFG
Sbjct: 190 VDLVIRTGGEHRISNFLLWQIAYAELFFTDVLWPDFNDIVFRRALHSFMKRDRRFGK 246
>gi|88608842|ref|YP_506808.1| undecaprenyl diphosphate synthase [Neorickettsia sennetsu str.
Miyayama]
gi|88601011|gb|ABD46479.1| undecaprenyl diphosphate synthase [Neorickettsia sennetsu str.
Miyayama]
Length = 230
Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats.
Identities = 96/234 (41%), Positives = 128/234 (54%), Gaps = 4/234 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M+ P HI IIMDGN RWA ARGL G++ G+E V A+ GI+ LT+F FS
Sbjct: 1 MIGKELPVHIAIIMDGNARWARARGLCNSDGYKMGVEAAFSAVRASCNAGIRYLTLFLFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+R ++ + + + L NIKV+VIG ++ L + V+K E T
Sbjct: 61 TENWKRNPDDVHLVFSIFEKASVTALDELCDANIKVKVIGEQVGLGESAKQVIKNLESGT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N+G+ L A NY R EI A+ + D + + +VD A YL T +PDPDL
Sbjct: 121 AKNSGMYLCFALNYGGRSEIINAVSRMISD----GLRAEEVDVQKFASYLYTDGIPDPDL 176
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
IIRT GEKRLS+FLLWQ +YSE F WPDF+ + A+ Y R RR+G
Sbjct: 177 IIRTAGEKRLSNFLLWQSSYSELYFCDTLWPDFTEKDLEIAMEAYKARCRRYGK 230
>gi|134097517|ref|YP_001103178.1| putative undecaprenyl pyrophosphate synthetase [Saccharopolyspora
erythraea NRRL 2338]
gi|291009342|ref|ZP_06567315.1| undecaprenyl pyrophosphate synthetase [Saccharopolyspora erythraea
NRRL 2338]
gi|133910140|emb|CAM00253.1| putative undecaprenyl pyrophosphate synthetase [Saccharopolyspora
erythraea NRRL 2338]
Length = 258
Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats.
Identities = 84/242 (34%), Positives = 126/242 (52%), Gaps = 6/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + S P H+G+I+DGN RWA G GHR+G E++ E ++ +T+
Sbjct: 19 LRRKLDVSKSPRHVGVILDGNRRWAKEAGFDVNHGHREGARKIAEMLGWCQEADVEVVTL 78
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N R E+S L+++I + + +VR++G L + L A
Sbjct: 79 WLLSTDNLNRSSDELSALLEIIAGVVDELTE--PGKPWRVRIVGALDLLPTETAARLSAA 136
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDS----SLIAKYLDT 176
+T+ TG+ + +A Y R EI+ A++ + Q ++ IA++L T
Sbjct: 137 ALRTKGRTGMQVNVAVGYGGRQEIADAVRKLLQQHAEAGTTIDELAEVLTVDHIAEHLYT 196
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
S PDPDL+IRT GE+RLS F+LWQ A+SEF F YWP F R F AL +Y R RRF
Sbjct: 197 SGQPDPDLLIRTSGEQRLSGFMLWQSAHSEFWFCEAYWPAFRRVDFLRALREYAARHRRF 256
Query: 237 GG 238
GG
Sbjct: 257 GG 258
>gi|311113055|ref|YP_003984277.1| undecaprenyl diphosphate synthase [Rothia dentocariosa ATCC 17931]
gi|310944549|gb|ADP40843.1| undecaprenyl diphosphate synthase [Rothia dentocariosa ATCC 17931]
Length = 272
Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats.
Identities = 90/241 (37%), Positives = 131/241 (54%), Gaps = 7/241 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M S+ P HIG+++DGN RWAA RGL GH G E + + A++GI +T+
Sbjct: 34 MATSLTPQMLPTHIGVLVDGNRRWAAQRGLSTREGHAAGAERIIDFLGWCADLGIPQVTL 93
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S N +RP E++ L+ +I FL++ + + V +GN + ++ L+
Sbjct: 94 YMLSTENLKRPADELTGLIAVIDEFLQRLHTAQQGP---VHAVGNVSLIPHELRNTLERV 150
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLDT 176
++T G+ + IA Y R EI A++ + D E+ D+ + I++ L T
Sbjct: 151 IEETAPLPGVRVNIAVGYGGRQEIVDAVRELILDAEAQGRSMRDLADTLNVEDISRRLYT 210
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
D+PDPDL+IRT GE+RLS FL WQ AYSEF F WPDF+R F AL Y R RRF
Sbjct: 211 RDMPDPDLLIRTSGEQRLSGFLTWQSAYSEFYFCQALWPDFTRVDFLRALRDYAGRTRRF 270
Query: 237 G 237
G
Sbjct: 271 G 271
>gi|294340703|emb|CAZ89095.1| Undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans,poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS) [Thiomonas sp.
3As]
Length = 245
Score = 251 bits (641), Expect = 8e-65, Method: Composition-based stats.
Identities = 94/240 (39%), Positives = 144/240 (60%), Gaps = 7/240 (2%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+A S+ P H+ ++MDGNGRWA R LPR +GH+ G++ +IV AE+G+K+LT+F
Sbjct: 6 IAKRDPSTLPRHVAVVMDGNGRWAQRRFLPRSSGHKFGVDALKKIVRHCAEIGVKHLTVF 65
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+ L+ L L++ L + +++ V+G+ + ++ ++ ++E
Sbjct: 66 AFSSENWARPAEEVQTLMDLFVKALQRESAELARQGVQLHVVGDLSAFSVEMRALIDQSE 125
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
TR N L L +A NY R ++++A + +F E +A++L S PD
Sbjct: 126 ALTRQNDTLVLNVALNYGGRWDVTQAAQALFAAQEVP-------TQQALARHLALSHSPD 178
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PDL+IRTGGE R+S+FLLWQ+AY+E F WPDF+ E F AL + R RRFGG+ +
Sbjct: 179 PDLLIRTGGEHRISNFLLWQLAYTELYFSDILWPDFNAEAFDAALADFASRQRRFGGVPE 238
>gi|54026792|ref|YP_121034.1| putative undecaprenyl pyrophosphate synthetase [Nocardia farcinica
IFM 10152]
gi|54018300|dbj|BAD59670.1| putative undecaprenyl pyrophosphate synthetase [Nocardia farcinica
IFM 10152]
Length = 262
Score = 251 bits (640), Expect = 8e-65, Method: Composition-based stats.
Identities = 82/242 (33%), Positives = 128/242 (52%), Gaps = 7/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGL-PRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+V + P H+ ++ DGN RWA G GHR G E+V ++ GI+ +T
Sbjct: 22 LVKQLAGRQHPRHVAVMCDGNRRWARENGFTDVSHGHRVGALKIAELVEWCSQAGIEMVT 81
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++ S N +R E+ L ++I +++ S + + VR++G+ + I ++
Sbjct: 82 VYLLSTENLQRDPEELETLFEVITDVVEEL--SAPERDWSVRIVGSLDGFPELIAKRMRT 139
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLD 175
A +QT G+++ +A Y R EI+ A++++ + + D + + I ++L
Sbjct: 140 AAEQTEGRRGVHVNVAVGYGGRQEIADAVRSLVRQEIAAGETGEDLVQSITVNAIGQHLY 199
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
TS PDPDL+IRT GE+RLS FLLWQ AYSE F YWP+F R F AL Y R RR
Sbjct: 200 TSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEIWFTEVYWPEFRRVDFLRALRDYAARHRR 259
Query: 236 FG 237
FG
Sbjct: 260 FG 261
>gi|297201555|ref|ZP_06918952.1| predicted protein [Streptomyces sviceus ATCC 29083]
gi|297147917|gb|EDY61011.2| predicted protein [Streptomyces sviceus ATCC 29083]
Length = 634
Score = 251 bits (640), Expect = 8e-65, Method: Composition-based stats.
Identities = 94/236 (39%), Positives = 145/236 (61%), Gaps = 1/236 (0%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIE-VFNEIVAAAAEVGIKNLTIFA 62
++ +S P H+ +IMDGNGRWA RGLPR GHR G E +++ AAE+G+ +LT++A
Sbjct: 381 TIPASRMPRHVAVIMDGNGRWATQRGLPRHEGHRAGAEGATRDVICGAAEIGLAHLTLYA 440
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW+R EI+ L + I++ L+ ++ I++R G+ + L D++ L +AE
Sbjct: 441 FSTENWKRDTEEIAFLFESIRNQLRTYANDKEELGIRIRWAGSAVGLPQDLIEELLQAEL 500
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
+TR TGL + + NY RDE++RA + + +G + V + +A++L D PD
Sbjct: 501 RTRHRTGLCVTVCINYGGRDELTRAAAQLARAAAAGDIDPDHVSDTDLARHLTWPDTPDV 560
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DL+ RTGGE+R+S+FLLWQ AY+E F WPD R + A+ +Y++R RR G
Sbjct: 561 DLLWRTGGEQRISNFLLWQAAYAELHFTDTNWPDIDRRDLWQAITEYSVRQRRHGA 616
>gi|269218572|ref|ZP_06162426.1| di-trans,poly-cis-decaprenylcistransferase [Actinomyces sp. oral
taxon 848 str. F0332]
gi|269211683|gb|EEZ78023.1| di-trans,poly-cis-decaprenylcistransferase [Actinomyces sp. oral
taxon 848 str. F0332]
Length = 229
Score = 251 bits (640), Expect = 8e-65, Method: Composition-based stats.
Identities = 91/225 (40%), Positives = 128/225 (56%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA ARGLPR GHR G ++VA A E+G+K L+ +AFS NW+R +E+
Sbjct: 1 MDGNGRWANARGLPRIEGHRVGEATLMDVVAGALEIGVKELSAYAFSTENWKRSPAEVRF 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
++ + L+ L ++VR +G L +L L+ AE+ TR NT L L + N
Sbjct: 61 IMGFSRQVLRAQRDDLNAWGVRVRWVGRTPKLWASVLRELRAAEELTRNNTKLTLNMCIN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R EI+ A+++I ++ G + V+ I ++L +PD DL IRT GE R S+F
Sbjct: 121 YGGRAEIADAVRSIAREAAEGRLKPGAVNEKTIQRHLYAPAMPDVDLFIRTSGELRTSNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+W+ AY+E F WPDF R + A Y RDRRFGG +
Sbjct: 181 LMWESAYAELYFSDLAWPDFDRRELWKACEAYAERDRRFGGAQDR 225
>gi|256389945|ref|YP_003111509.1| undecaprenyl diphosphate synthase [Catenulispora acidiphila DSM
44928]
gi|256356171|gb|ACU69668.1| undecaprenyl diphosphate synthase [Catenulispora acidiphila DSM
44928]
Length = 257
Score = 251 bits (640), Expect = 8e-65, Method: Composition-based stats.
Identities = 87/235 (37%), Positives = 133/235 (56%), Gaps = 7/235 (2%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
P HIG+IMDGN RWA G GH++G + +E++ A E G++ +T++ FS +
Sbjct: 25 KKKVPRHIGVIMDGNRRWAKQMGEQIATGHQRGADKIHEVLDWAEEAGVETVTLWLFSTD 84
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
N+ RP E+++L+++I+ ++ + +V +G + D LKE E+QTR
Sbjct: 85 NFNRPADELTDLLRIIEGSVRSLADT---GRWRVHPLGALDLMPADFARHLKEIEEQTRD 141
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLDTSDVPDP 182
N G+++ +A Y R EI+ A++++ D + D+ D I ++L T DP
Sbjct: 142 NPGIHVNVAIGYGGRREIADAVRSLLADAAARGTSIEDLVQMLDVEHITEHLYTQGQQDP 201
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DLIIRT GE+RLS F+LWQ A+SEF F YWP F + F AL Y R RR+G
Sbjct: 202 DLIIRTSGEQRLSGFMLWQSAHSEFYFCEAYWPAFRKVDFLRALRDYANRHRRYG 256
>gi|220912015|ref|YP_002487324.1| undecaprenyl diphosphate synthase [Arthrobacter chlorophenolicus
A6]
gi|219858893|gb|ACL39235.1| undecaprenyl diphosphate synthase [Arthrobacter chlorophenolicus
A6]
Length = 257
Score = 251 bits (640), Expect = 8e-65, Method: Composition-based stats.
Identities = 78/241 (32%), Positives = 123/241 (51%), Gaps = 7/241 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + P HIG+++DGN RWA P GH+ G + +E + E+G+K +T+
Sbjct: 19 LLKDLSRDRIPRHIGVMVDGNRRWAKQFNAPTSQGHQAGADKIHEFLGWCRELGVKVVTL 78
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N R E+ L+ +I + L + NI V +G L + L +
Sbjct: 79 YMLSTDNMNRSSEELDLLMGIIANTLDRLDE---DENISVHAMGAPELLPGYLAERLNKL 135
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDT 176
+T ++ +++ +A Y R EI A++ + D + + + L I+++L T
Sbjct: 136 TARTPVHEKIHVNVAVGYGGRREIVDAVRELLHDAVAKGADINQLADELSVDDISRFLYT 195
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
PDPDL+IRT GE+RLS FL+WQ AYSEF F WP F + F AL Y R RR+
Sbjct: 196 RGQPDPDLVIRTSGEQRLSGFLMWQSAYSEFYFCEALWPAFRKVDFLRALRDYAGRQRRY 255
Query: 237 G 237
G
Sbjct: 256 G 256
>gi|224419258|ref|ZP_03657264.1| hypothetical protein HcanM9_08298 [Helicobacter canadensis MIT
98-5491]
gi|253826973|ref|ZP_04869858.1| undecaprenyl pyrophosphate synthetase [Helicobacter canadensis MIT
98-5491]
gi|313142760|ref|ZP_07804953.1| undecaprenyl pyrophosphate synthetase [Helicobacter canadensis MIT
98-5491]
gi|253510379|gb|EES89038.1| undecaprenyl pyrophosphate synthetase [Helicobacter canadensis MIT
98-5491]
gi|313131791|gb|EFR49408.1| undecaprenyl pyrophosphate synthetase [Helicobacter canadensis MIT
98-5491]
Length = 224
Score = 251 bits (640), Expect = 8e-65, Method: Composition-based stats.
Identities = 83/229 (36%), Positives = 124/229 (54%), Gaps = 8/229 (3%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA R PR GH++G + + I + GIK L+++AFS NW RP
Sbjct: 3 RHLAIIMDGNGRWAKNRFKPRFFGHQEGAKTIHSITETCVKKGIKYLSLYAFSTENWNRP 62
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL-NTGL 130
EI L+ L++ +L + + +NI +VIG+ + + + + T GL
Sbjct: 63 KKEIDFLMNLLEKYLHEQTQTYLDSNIIFKVIGDISVFNSKLQEKIHHLQSITAESCNGL 122
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY ++DE+ RA I + I + LDT+ +P+ D++IRTGG
Sbjct: 123 TQILALNYGAKDELRRAFLKIQNKNLP-------ITQESITQNLDTAGIPEVDMLIRTGG 175
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+RLS+FLLWQ AY+E F WPDF + + ++ R RRFG +
Sbjct: 176 EQRLSNFLLWQSAYAELFFTKTLWPDFGSDELEAMIEKFATRQRRFGAI 224
>gi|315587111|gb|ADU41492.1| Di-trans,poly-cis-decaprenylcistransferase [Helicobacter pylori
35A]
Length = 234
Score = 251 bits (640), Expect = 9e-65, Method: Composition-based stats.
Identities = 85/229 (37%), Positives = 136/229 (59%), Gaps = 1/229 (0%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLEYLTLYAFSTENWKRP 65
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE+ L+K++K +LK + N+I+ R IG+ ++ + + E+ T
Sbjct: 66 KSEVDFLMKMLKKYLKDERSTYLDNHIRFRAIGDLEGFSKELRDTILQLENDTGHFKDFT 125
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+A NY S++EISRA K++ + S +++ I+ +LDT ++P+ DL++RTGGE
Sbjct: 126 QVLALNYGSKNEISRAFKSLLESPPSNISLLESLENE-ISNHLDTRNLPEVDLLLRTGGE 184
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELK 233
>gi|15807434|ref|NP_296167.1| undecaprenyl pyrophosphate synthase [Deinococcus radiodurans R1]
gi|6460263|gb|AAF11988.1|AE002074_6 undecaprenyl diphosphate synthase [Deinococcus radiodurans R1]
Length = 339
Score = 251 bits (640), Expect = 9e-65, Method: Composition-based stats.
Identities = 83/238 (34%), Positives = 125/238 (52%), Gaps = 6/238 (2%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ P H+G+I+DGN R+A A GL R GH G + +E++ E+GI + TI+ S +
Sbjct: 102 NGKLPRHLGLILDGNRRFARAAGLQREMGHSFGADKAHEVLQWCLELGIPSATIWVLSTD 161
Query: 67 NWRRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
N R +E++ ++ L++ ++ + N ++VR IG + +L L E+ T
Sbjct: 162 NGSREPAELAHILSLLEREARQLAVDPRIHANRVRVRAIGQHDNFPPQVLAALNNLEEST 221
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNI----FQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
G+ L IA Y R+EI A+++ + + ++ I +L +D P
Sbjct: 222 AGYEGMRLNIAVGYGGREEIVDAVQSYLRTQAAQGATLEQAAENLTPDAIGAHLYAADQP 281
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DPD IIRT GE RLS F+LWQ YSE+ F YWP F R F AL + RDRRFG
Sbjct: 282 DPDFIIRTSGEIRLSGFMLWQSVYSEYYFCDVYWPGFRRVDFLRALRDFQGRDRRFGK 339
>gi|307637894|gb|ADN80344.1| Undecaprenyl pyrophosphate synthetase [Helicobacter pylori 908]
gi|325996491|gb|ADZ51896.1| Undecaprenyl pyrophosphate synthetase [Helicobacter pylori 2018]
gi|325998079|gb|ADZ50287.1| Undecaprenyl pyrophosphate synthetase [Helicobacter pylori 2017]
Length = 234
Score = 251 bits (640), Expect = 1e-64, Method: Composition-based stats.
Identities = 86/229 (37%), Positives = 135/229 (58%), Gaps = 1/229 (0%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ +IMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 6 KHLAVIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE+ L+K++K +LK + NNI+ R IG+ ++ + E+ TR
Sbjct: 66 KSEVDFLMKMLKKYLKDERSTYLDNNIRFRAIGDLEGFSKELRDTILRLENDTRHFKDFT 125
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+A NY S++E+SRA K++ + S +++ I+ LDT D+P+ DL++RTGGE
Sbjct: 126 QVLALNYGSKNELSRAFKSLLESPPSHINNIESLENE-ISHRLDTHDLPEVDLLLRTGGE 184
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELK 233
>gi|297380400|gb|ADI35287.1| undecaprenyl diphosphate synthase [Helicobacter pylori v225d]
Length = 234
Score = 251 bits (640), Expect = 1e-64, Method: Composition-based stats.
Identities = 87/229 (37%), Positives = 136/229 (59%), Gaps = 1/229 (0%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE+ L+K++K +LK + NNI+ R IG+ ++ + + E+ TR
Sbjct: 66 KSEVDFLMKMLKKYLKDERSTYLDNNIRFRAIGDLEGFSKELRETILQLENDTRHFKDFT 125
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+A NY S++E+SRA K++ + S +++ I+ LDT D+P+ DL++RTGGE
Sbjct: 126 QVLALNYGSKNELSRAFKSLLESPPSNISLLESLENE-ISNRLDTRDLPEVDLLLRTGGE 184
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELK 233
>gi|308064000|gb|ADO05887.1| undecaprenyl pyrophosphate synthase [Helicobacter pylori Sat464]
Length = 234
Score = 251 bits (640), Expect = 1e-64, Method: Composition-based stats.
Identities = 87/229 (37%), Positives = 137/229 (59%), Gaps = 1/229 (0%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 6 KHLAIIMDGNGRWAKLKNKARVYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE+ L+K++K +LK + NNI+ R IG+ ++ + + E+ TR
Sbjct: 66 KSEVDFLMKMLKKYLKDERSTYLDNNIRFRAIGDLEGFSKELRETILQLENDTRHFKDFT 125
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+A NY S++E+SRA K++ + S + +++ I+ LDT D+P+ DL++RTGGE
Sbjct: 126 QVLALNYGSKNELSRAFKSLLESPPSNTSFLESLENE-ISNRLDTRDLPEVDLLLRTGGE 184
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELK 233
>gi|296119856|ref|ZP_06838410.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
ammoniagenes DSM 20306]
gi|295967010|gb|EFG80281.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
ammoniagenes DSM 20306]
Length = 223
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 86/223 (38%), Positives = 128/223 (57%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA RG+ R GH++G V ++V A +G+ L+ +AFS NWRR E+
Sbjct: 1 MDGNGRWAKERGMKRTEGHKRGEAVLLDVVEACLALGVPYLSAYAFSTENWRRSPDEVRF 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ + L++ L + ++V G R L ++ L+ AE T NT + L + N
Sbjct: 61 LMGFNRDVLRRQREWLNERGVRVVWAGRRPRLWRSVIRELEAAEKLTENNTKMTLVMCVN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R E++ A + + +D+++G++ V IA YL +PD DL +R GEKR S+F
Sbjct: 121 YGGRAELADAFRKMGEDVKAGTLNPSTVTEKTIANYLYDPGMPDVDLFLRPSGEKRTSNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LLWQ AY+E V+ + +PDF+ E F A+ +Y RDRRFGG
Sbjct: 181 LLWQSAYAELVYQDKLFPDFTPEDLFAAVEEYARRDRRFGGAK 223
>gi|84497880|ref|ZP_00996677.1| di-trans-poly-cis-decaprenylcistransferase [Janibacter sp.
HTCC2649]
gi|84381380|gb|EAP97263.1| di-trans-poly-cis-decaprenylcistransferase [Janibacter sp.
HTCC2649]
Length = 267
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 83/242 (34%), Positives = 126/242 (52%), Gaps = 7/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + S P H+G+++DGN RWA ARG GH+ G + ++ EVG++ +T+
Sbjct: 29 LTKRLPPESVPRHVGVMLDGNRRWAKARGAGTSEGHQAGADNIAHFLSWCEEVGVEVVTL 88
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N R SE+ L+ +I+ + + S + ++ +G L L+ A
Sbjct: 89 WLLSTDNLSRAESELRPLLGIIERTVDELADS---HQWRLNPVGALSLLPAATRERLEGA 145
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLDT 176
+T GL + IA Y R EI+ A++++ + ++ D IA +L T
Sbjct: 146 ATRTAEVDGLLVNIAVGYGGRREIADAVRSLLLEHADRGTTIEELAEFLDVEHIADHLYT 205
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
PDPDL+IRT GE+RL FLLWQ A+SEF F YWPDF + F AL Y R+RRF
Sbjct: 206 KGQPDPDLVIRTSGEQRLGGFLLWQSAHSEFYFCEAYWPDFRKVDFLRALRAYGERNRRF 265
Query: 237 GG 238
G
Sbjct: 266 GA 267
>gi|300743812|ref|ZP_07072832.1| di-trans,poly-cis-decaprenylcistransferase [Rothia dentocariosa
M567]
gi|300380173|gb|EFJ76736.1| di-trans,poly-cis-decaprenylcistransferase [Rothia dentocariosa
M567]
Length = 259
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 90/241 (37%), Positives = 130/241 (53%), Gaps = 7/241 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M S+ P HIG+++DGN RWAA RGL GH G E + + A++GI +T+
Sbjct: 21 MATSLTPQMLPTHIGVLVDGNRRWAAQRGLSTREGHAAGAERIIDFLGWCADLGIPQVTL 80
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S N +RP E++ L+ +I FL++ + + V +GN + ++ L+
Sbjct: 81 YMLSTENLKRPADELTGLIAVIDEFLRRLRTAQQGP---VHAVGNVSLIPHELRNTLERV 137
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLDT 176
+T G+ + IA Y R EI A++ + D E+ D+ + I++ L T
Sbjct: 138 IAETAPLPGVRVNIAVGYGGRQEIVDAVRELILDAEAQGCSMRDLADTLNVEDISRRLYT 197
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
D+PDPDL+IRT GE+RLS FL WQ AYSEF F WPDF+R F AL Y R RRF
Sbjct: 198 RDMPDPDLLIRTSGEQRLSGFLTWQSAYSEFYFCQALWPDFTRVDFLRALRDYAGRTRRF 257
Query: 237 G 237
G
Sbjct: 258 G 258
>gi|125528434|gb|EAY76548.1| hypothetical protein OsI_04491 [Oryza sativa Indica Group]
Length = 228
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 96/224 (42%), Positives = 132/224 (58%), Gaps = 4/224 (1%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGN RWA ARGLP AGH G E V + GI+ LT FAFS NW RP E+
Sbjct: 1 MDGNARWARARGLPSAAGHEAGRRTLEETVRLSRAWGIRALTAFAFSNENWSRPKVEVDF 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L + + + I++RVIG+ L + + +EAE+ TR N+ L+L +A +
Sbjct: 61 LMRLFERVIHDSVAEFLREGIRLRVIGDSSRLPVSLQKIAREAEETTRNNSQLDLTLAIS 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS----DVPDPDLIIRTGGEKR 193
YS R +I +A + + Q ++S ++ + D+D +L A L+TS + P PDL+IRT GE R
Sbjct: 121 YSGRRDIVQACRKLAQKVQSKALAAEDIDEALFADELETSCAADEFPYPDLLIRTSGELR 180
Query: 194 LSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
LS+FLLWQ AYSE F WPDF + AL + RDRRFG
Sbjct: 181 LSNFLLWQSAYSELFFTNTLWPDFGEADYLEALCSFQSRDRRFG 224
>gi|149535422|ref|XP_001507272.1| PREDICTED: similar to dehydrodolichyl diphosphate synthase, partial
[Ornithorhynchus anatinus]
Length = 255
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 81/234 (34%), Positives = 130/234 (55%), Gaps = 4/234 (1%)
Query: 1 MVASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ A+++ + P P HI IMDGN R+A + R GH +G + E + +G+ +T
Sbjct: 15 LCANIIKAGPMPKHIAFIMDGNRRYAQKCQVERQQGHSQGFDKLAETLRWCLNLGVHEVT 74
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCV 116
++AFSI N++R E+ L+ L + + L+K+ + +RV+G+ L D+ +
Sbjct: 75 VYAFSIENFKRTKDEVDGLMDLARQKFTRLLEEQEKLRKHGVCIRVLGDLHLLPRDLREL 134
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT 176
+ A TR + L + F Y+SR EIS A++ + +E G + DV L+ + L T
Sbjct: 135 IARAVRATRSYSKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLKPSDVSEGLLDRCLYT 194
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
+ PDPD++IRT GE RLSDFLLWQ ++S VF P WP+++ AL Q+
Sbjct: 195 NHSPDPDILIRTSGEVRLSDFLLWQTSHSCLVFQPMLWPEYTFWNLCEALLQFQ 248
>gi|261366578|ref|ZP_05979461.1| di-trans,poly-cis-decaprenylcistransferase [Subdoligranulum
variabile DSM 15176]
gi|282571397|gb|EFB76932.1| di-trans,poly-cis-decaprenylcistransferase [Subdoligranulum
variabile DSM 15176]
Length = 241
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 89/236 (37%), Positives = 131/236 (55%), Gaps = 2/236 (0%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAA-EVGIKNLTIFAFSIN 66
S P H II+DGN RWA R LP GH+ G + EI A + G+K L+++ FS
Sbjct: 7 SRIPTHAAIIVDGNRRWARQRMLPASLGHKAGFDRLKEITRYAVGDRGVKVLSLYVFSTE 66
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
N+ R E+ L+ L + + + + +V G R L +L + D T+
Sbjct: 67 NFARDAKEVGYLMDLFANNFRTIADEMNERGCQVLFSGRREGLQQRVLDAMDYMMDLTKD 126
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
NT + NY S EI+ A+++I ++++SG++ +D I +L +P DL+I
Sbjct: 127 NTKGIVNFCLNYGSHAEITDAVRSIAREVKSGTLQPDAIDEKTIESHLY-RQLPPVDLMI 185
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
RT GE+RLS+FLLWQ AY+EF F P +PDF++E F AL +Y RDRR GG +KK
Sbjct: 186 RTSGEERLSNFLLWQCAYAEFYFTPVLFPDFTKECFDQALEEYARRDRRMGGNTKK 241
>gi|190570532|ref|YP_001974890.1| undecaprenyl diphosphate synthase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213019290|ref|ZP_03335097.1| undecaprenyl diphosphate synthase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|190356804|emb|CAQ54169.1| undecaprenyl diphosphate synthase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995399|gb|EEB56040.1| undecaprenyl diphosphate synthase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 231
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 94/233 (40%), Positives = 124/233 (53%), Gaps = 8/233 (3%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P H+ IIMDGNGRWA +G + G+RKG EV +I + I LT++AFS+ N
Sbjct: 5 ESLPKHLAIIMDGNGRWANNQGRVKIDGYRKGSEVAFDIAKHCTVLAIPYLTLYAFSMEN 64
Query: 68 WRRPVSEISELVKLIKSFLKKG--FYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
W R +E L L L + NIK+ IGN L I +K+AE+ T
Sbjct: 65 WLRSENETDYLFNLFYYTLTNEDKMKFIYNCNIKLNFIGNLSLLPSKIFDQIKKAEEVTH 124
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
N GL L +A +Y ++ EI AI N+ V K+L T D+P DL+
Sbjct: 125 KNDGLLLTVAVSYGAKQEIIHAINNVI------KGNIDCVLEEEFEKFLYTKDLPKLDLL 178
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
IRTGGEKRLS+FLLWQ AY+E F WPDFS + AL Y R++++G
Sbjct: 179 IRTGGEKRLSNFLLWQAAYAELYFCDTLWPDFSCQDLTKALEDYTKREKKYGR 231
>gi|254282011|ref|ZP_04956979.1| undecaprenyl pyrophosphate synthetase 1 [gamma proteobacterium
NOR51-B]
gi|219678214|gb|EED34563.1| undecaprenyl pyrophosphate synthetase 1 [gamma proteobacterium
NOR51-B]
Length = 239
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 82/220 (37%), Positives = 128/220 (58%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGN RWA +G+ GHR G+EV ++ A + G++ LT+FAFS NW RP +E+
Sbjct: 1 MDGNNRWAVRQGIAGHLGHRAGVEVVRAVMEACEKKGVEVLTLFAFSSENWGRPEAEVRA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ L+ +L+ L+++ I++R++G R + + + E T NT L +A +
Sbjct: 61 LMALLYRYLRSELEKLQRDGIRLRIVGRRDRFSPRLRRLFEVTEAATADNTNATLVLALD 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I+ A + + + +++GS+ ++ + L SD+P PDL IRT GE+R+S+F
Sbjct: 121 YGGRWDIASAARQLAESVQAGSLQPDQINEETLESQLSLSDLPPPDLCIRTAGEQRMSNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
LLW +AYSEF F WPDF A+ Y R+RRFG
Sbjct: 181 LLWHLAYSEFFFTDTLWPDFDETTLDAAIADYQRRERRFG 220
>gi|298735760|ref|YP_003728285.1| undecaprenyl pyrophosphate synthetase [Helicobacter pylori B8]
gi|298354949|emb|CBI65821.1| undecaprenyl pyrophosphate synthetase [Helicobacter pylori B8]
Length = 234
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 84/229 (36%), Positives = 131/229 (57%), Gaps = 1/229 (0%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA + R GH+KG++ +I ++ LT++AFS NW+RP
Sbjct: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCTNHKLECLTLYAFSTENWKRP 65
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE+ L+K++K +LK + NNI+ R IG+ ++ + + E TR
Sbjct: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLESDTRHFKDFT 125
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+A NY S++E+SRA + ++ + + I+ LDT D+P+ DL++RTGGE
Sbjct: 126 QVLALNYGSKNELSRA-FKSLLENPPNNIDPLESLENEISNRLDTRDLPEVDLLLRTGGE 184
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELK 233
>gi|170031395|ref|XP_001843571.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167869831|gb|EDS33214.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 322
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 82/244 (33%), Positives = 131/244 (53%), Gaps = 3/244 (1%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + + P H+ IMDGN R+A + + GH KG + +E + ++GI+ +T++
Sbjct: 27 IRVLKAGPIPQHVAFIMDGNRRFAQKENIAKAEGHSKGFDKLSETLQWCQDIGIREVTVY 86
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKK---GFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
AFSI N++R E+ L+ L + +K L + I +R+IGN L +DI L
Sbjct: 87 AFSIENFKRTKEEVDTLMSLAREKFRKLLEERDKLHERGICIRIIGNTALLPEDIQRFLA 146
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
EA TR NT L +AF+Y+SRDE++ +I+ + + G + D+D L+++ + T
Sbjct: 147 EAVLITRNNTKAFLNVAFSYTSRDEMAHSIRTVAEGFAQGKLQQDDIDEELLSRCMYTKH 206
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+PDL++RT GE RLSDFL WQ + F WPDF+ F A+ Y + G
Sbjct: 207 GTNPDLLVRTSGEVRLSDFLTWQSESTVIYFTETLWPDFNVWQLFGAVFYYQRCHWQLGA 266
Query: 239 LSKK 242
K+
Sbjct: 267 GGKR 270
>gi|261839941|gb|ACX99706.1| hypothetical protein HPKB_1157 [Helicobacter pylori 52]
Length = 234
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 87/229 (37%), Positives = 136/229 (59%), Gaps = 1/229 (0%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA + R GH+KG++ +I A +K LT++AFS NW+RP
Sbjct: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLKCLTLYAFSTENWKRP 65
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE+ L+K++K +LK + N+I+ + IG+ ++ + + E+ TR
Sbjct: 66 KSEVDFLMKMLKKYLKDERSTYLDNHIRFKAIGDLEGFSKELRETILQLENDTRHFKDFT 125
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+A NY S++EISRA K++ + S +++ I+ LDT D+P+ DL++RTGGE
Sbjct: 126 QVLALNYGSKNEISRAFKSLLESPPSNISLLESLENE-ISNRLDTRDLPEVDLLLRTGGE 184
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELK 233
>gi|146278187|ref|YP_001168346.1| undecaprenyl diphosphate synthase [Rhodobacter sphaeroides ATCC
17025]
gi|145556428|gb|ABP71041.1| Undecaprenyl pyrophosphate synthetase [Rhodobacter sphaeroides ATCC
17025]
Length = 245
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 98/238 (41%), Positives = 147/238 (61%), Gaps = 4/238 (1%)
Query: 6 MSSSPPD----HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ PP H+ IIMDGNGRWA RG PR GHR+G E EIV A+ +GI+ LTI+
Sbjct: 5 READPPRRRADHVAIIMDGNGRWAVNRGWPRLVGHRRGAERVREIVKASPNLGIRWLTIY 64
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+R E+ L+ + ++++ L + +++R IG+R LD + ++ E
Sbjct: 65 AFSTENWKRSTEEVLGLMSIFARYIEREADRLAQEGVRMRFIGDRTRLDAKLQRLMASIE 124
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T+ N L+L +A NY RDE++RA + + +D+ G + + D + +A LDT+ +PD
Sbjct: 125 ARTQFNQRLHLTVAINYGGRDELARAARRMCEDVAEGRLRPDEADEAALAARLDTAGMPD 184
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
PDL+IRT GE R S+FL WQ AY+E+ F P WPDF+ + +Y +R+RRFGG+
Sbjct: 185 PDLVIRTSGETRTSNFLPWQSAYAEYDFSPTLWPDFTATELAAIIERYGVRERRFGGV 242
>gi|15612207|ref|NP_223860.1| undecaprenyl pyrophosphate synthase [Helicobacter pylori J99]
gi|10720342|sp|Q9ZK05|UPPS_HELPJ RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|4155749|gb|AAD06728.1| putative [Helicobacter pylori J99]
Length = 234
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 86/229 (37%), Positives = 136/229 (59%), Gaps = 1/229 (0%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE+ L+K++K +LK + NNI+ R IG+ ++ + E+ TR
Sbjct: 66 KSEVDFLMKMLKKYLKDERSTYLDNNIRFRAIGDLEGFSKELRDTILRLENDTRYFKDFT 125
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+A NY S++E+SRA K++ ++ + +++ I+ LDT D+P+ DL++RTGGE
Sbjct: 126 QVLALNYGSKNELSRAFKSLLENPPNHINNIESLENE-ISHRLDTHDLPEVDLLLRTGGE 184
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELK 233
>gi|308183326|ref|YP_003927453.1| undecaprenyl pyrophosphate synthase [Helicobacter pylori PeCan4]
gi|308065511|gb|ADO07403.1| undecaprenyl pyrophosphate synthase [Helicobacter pylori PeCan4]
Length = 234
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 86/229 (37%), Positives = 135/229 (58%), Gaps = 1/229 (0%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE+ L+K++K +LK + NNI+ R IG+ ++ + + E+ T
Sbjct: 66 KSEVDFLMKMLKKYLKDERSTYLDNNIRFRAIGDLEGFSKELRETILQLENDTGHFKDFT 125
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+A NY S++E+SRA K++ + S +++ I+ LDT D+P+ DL++RTGGE
Sbjct: 126 QVLALNYGSKNELSRAFKSLLESPPSNISLLESLENE-ISNRLDTRDLPEVDLLLRTGGE 184
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELK 233
>gi|15604290|ref|NP_220806.1| hypothetical protein RP425 [Rickettsia prowazekii str. Madrid E]
gi|6647891|sp|Q9ZDA7|UPPS_RICPR RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|3860982|emb|CAA14882.1| unknown [Rickettsia prowazekii]
gi|292572039|gb|ADE29954.1| Undecaprenyl pyrophosphate synthetase [Rickettsia prowazekii Rp22]
Length = 226
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 85/227 (37%), Positives = 124/227 (54%), Gaps = 6/227 (2%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGN RWA L + GH+ G + E++ + I +T++ FS NW+R
Sbjct: 5 KHLAIIMDGNARWADRHNLTKSEGHKAGADKIRELLPEFINLNIPYITLYTFSFENWQRS 64
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE+ L+KL+ +LK SL +N +K++VIG L + + A + T+ N +
Sbjct: 65 SSEVDFLIKLLSIYLKNELDSLHENGVKIKVIGRLNLLRSSLQKQINNAIELTKNNNKIK 124
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L IAF+Y SR EI A I + V I L ++PD DL+IR+GG
Sbjct: 125 LCIAFSYGSRQEIVDACTKIIAHGKK------QVSEYDIQHALYDPEMPDVDLLIRSGGV 178
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R+S+FLLWQ AY+E F +YWPDF+++ A+N Y+ R R FG
Sbjct: 179 YRISNFLLWQAAYAELYFSQKYWPDFNKDDIHEAINDYSKRKRTFGK 225
>gi|313837268|gb|EFS74982.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL037PA2]
gi|314928057|gb|EFS91888.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL044PA1]
gi|314972039|gb|EFT16137.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL037PA3]
Length = 233
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 83/221 (37%), Positives = 123/221 (55%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA RGL R GH +G + +++ A E+GI L+++AFS NW+R E+
Sbjct: 1 MDGNGRWAKQRGLKRTDGHARGEDALFDVIEGAIEMGIPYLSVYAFSTENWKRSPDEVRW 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ + + + L +++R G R L ++ L+ AE+Q+ NT L L N
Sbjct: 61 LMGFNRDVIHRRRDQLDAMGVRIRWAGRRPKLWKSVIKELESAEEQSADNTVLTLQFCVN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R EI A+++I + + G + + +LD ++PD DL R+ GE+R S+F
Sbjct: 121 YGGRAEIVDAVRDIARLVAEGKIDPDHITEKTFRTHLDEPEIPDVDLFWRSSGEQRTSNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
LLWQ AY+E VF WPD R + A+ +Y RDRRFGG
Sbjct: 181 LLWQSAYAEMVFSDVLWPDVDRRDLWDAVVEYAKRDRRFGG 221
>gi|309810960|ref|ZP_07704760.1| putative di-trans,poly-cis-decaprenylcistransferase [Dermacoccus
sp. Ellin185]
gi|308435114|gb|EFP58946.1| putative di-trans,poly-cis-decaprenylcistransferase [Dermacoccus
sp. Ellin185]
Length = 254
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 80/241 (33%), Positives = 123/241 (51%), Gaps = 7/241 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+V + P H+G+++DGN RWA RG GH+ G + ++ E+GI+ +T+
Sbjct: 16 LVKGLPPERLPRHVGLMLDGNRRWAKKRGANTAHGHKAGADNIEPLLTWCEELGIEVVTL 75
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N +R +E++ L+ +I+ + + + N + ++G L + L+ A
Sbjct: 76 WLLSTDNLKRSETELAPLLAIIEDVVDELSAA---GNRRFNLVGALGLLPEATRTRLENA 132
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVC----SHDVDSSLIAKYLDT 176
T+ G+ + IA Y R EI A + I D + + + YL T
Sbjct: 133 VSATQDGDGMVVNIAVGYGGRQEIVDAFRAILLDAAERGEDMTQLAQRLTIDSVGDYLYT 192
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
PDPDL+IRT GE+RL FLLWQ A+SEF F +WPDF R F AL Y R+RRF
Sbjct: 193 KGQPDPDLVIRTSGEQRLGGFLLWQSAHSEFYFCEAFWPDFRRVDFLRALRAYAERERRF 252
Query: 237 G 237
G
Sbjct: 253 G 253
>gi|227832755|ref|YP_002834462.1| Undecaprenyl pyrophosphate synthase [Corynebacterium aurimucosum
ATCC 700975]
gi|262182755|ref|ZP_06042176.1| Undecaprenyl pyrophosphate synthase [Corynebacterium aurimucosum
ATCC 700975]
gi|227453771|gb|ACP32524.1| Undecaprenyl pyrophosphate synthase [Corynebacterium aurimucosum
ATCC 700975]
Length = 256
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 77/243 (31%), Positives = 119/243 (48%), Gaps = 7/243 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ + + P H+ I+ DGN RWA G GHR+G +E+++ I+ +T
Sbjct: 16 LTREIKNKPQPRHVAIMADGNRRWAREAGFTDISHGHRQGARKISEMISWCQGTDIEVVT 75
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
I+ S N +R E+ L +I + I++ +G+ L + + ++
Sbjct: 76 IYLLSTENLKRSEQEVQLLFDIISDVVTHLSQGDLDCQIRL--VGHLDLLPEQVTAKMQC 133
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDS----SLIAKYLD 175
A + T + G+ + IA Y R EI A++++ + + + ++ I L
Sbjct: 134 AAEATEDHQGVIVNIAVGYGGRQEIVDAVQSLIRSESEKGLSAEEIAENVTAEAITGNLY 193
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
T +PDPDL+IRT GE+RLS FLLWQ AYSE F YWP F R F AL Y+ R RR
Sbjct: 194 TKGLPDPDLVIRTSGEQRLSGFLLWQAAYSEIWFTDTYWPAFRRVDFLRALRDYSQRSRR 253
Query: 236 FGG 238
FG
Sbjct: 254 FGR 256
>gi|196005207|ref|XP_002112470.1| hypothetical protein TRIADDRAFT_56521 [Trichoplax adhaerens]
gi|190584511|gb|EDV24580.1| hypothetical protein TRIADDRAFT_56521 [Trichoplax adhaerens]
Length = 344
Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats.
Identities = 75/229 (32%), Positives = 121/229 (52%), Gaps = 3/229 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P H+ IMDGN R+A R GH G + E + ++GIK +T++AFS
Sbjct: 36 IKAGEIPKHVAFIMDGNRRYALKMNYSRIIGHSMGFDKLAETLEWCLDLGIKEVTVYAFS 95
Query: 65 INNWRRPVSEISELVKLIKSFLKK---GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R E+ +L+KL K + + K+ I +R+ G+ L D+ +
Sbjct: 96 IENFKRSKKEVEDLMKLAKGKFDRLLLERDKIDKHGICIRIFGDISLLPPDVQVAVANTV 155
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+R N L + Y++R+E++ A+K + +E+ + D+ L+ K + T +
Sbjct: 156 KISRHNNRAFLNVCLAYTARNEMTNAMKELAIGVENQMLRPSDICEDLLEKCMYTGEATQ 215
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
PDLIIRT GE RLSDFLLWQ AYS F+ YWP+F+ F + ++
Sbjct: 216 PDLIIRTSGEVRLSDFLLWQSAYSCLTFLDVYWPEFTIWNFLWCIIRFQ 264
>gi|315499833|ref|YP_004088636.1| undecaprenyl diphosphate synthase [Asticcacaulis excentricus CB 48]
gi|315417845|gb|ADU14485.1| undecaprenyl diphosphate synthase [Asticcacaulis excentricus CB 48]
Length = 252
Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats.
Identities = 91/221 (41%), Positives = 136/221 (61%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
++ P H+ IIMDGNGRWA AR R GH+ G+E + + AA +G+ +LT+FAFS
Sbjct: 12 AAPVPLHVAIIMDGNGRWAKARRQIRTFGHKAGVEALRKTITAAPHLGVTHLTVFAFSTE 71
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NWRRP +E+S+L+ L+K+F++ L ++ + VR+IG+R L DI + EA +T+
Sbjct: 72 NWRRPATEVSDLMGLLKAFIRSDMDRLARDGVCVRIIGDRAGLPVDIRECVDEAHQRTQH 131
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N+ L +A NY ++ +I A K + +++G D+ + L TS +P DL+I
Sbjct: 132 NSRFFLQVALNYGAQADILEAAKTFARQVKAGEAALEDLTAERFGGLLSTSGLPPLDLLI 191
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALN 227
RT GE RLS+FLLW+ AY+EFVF WPD+ E AL+
Sbjct: 192 RTSGEHRLSNFLLWEAAYAEFVFQDVLWPDYDGEALKAALD 232
>gi|332530831|ref|ZP_08406757.1| undecaprenyl diphosphate synthase [Hylemonella gracilis ATCC 19624]
gi|332039743|gb|EGI76143.1| undecaprenyl diphosphate synthase [Hylemonella gracilis ATCC 19624]
Length = 261
Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats.
Identities = 93/239 (38%), Positives = 130/239 (54%), Gaps = 7/239 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ S P HI I+MDGNGRWA R LPR AGHR+G+E + A E G+ LT+
Sbjct: 11 ILNRAPSLGVPTHIAIVMDGNGRWATRRLLPRLAGHRQGMESLRRCIRACLERGVAVLTV 70
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FAFS NW RP E+S L++L+ L K + + +++ +G R +L + + L A
Sbjct: 71 FAFSSENWNRPAEEVSGLMELLAGALAKEVPQMHADGVRLHFVGERANLSEKVRTGLTTA 130
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E T N L L + FNY R ++ +A + +V + +A L + V
Sbjct: 131 EQATAGNDRLILNVCFNYGGRWDLVQAAAKLAAAKV-------EVTEATLASALALAHVA 183
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DPDL+IRTGGE RLS+FLLWQ AY+E F WPDF A+ Y R+RR+G +
Sbjct: 184 DPDLLIRTGGELRLSNFLLWQAAYAELYFSEMLWPDFDEAELDRAIAAYAKRERRYGRV 242
>gi|333022717|ref|ZP_08450781.1| putative di-trans,poly-cis-decaprenylcistransferase [Streptomyces
sp. Tu6071]
gi|332742569|gb|EGJ73010.1| putative di-trans,poly-cis-decaprenylcistransferase [Streptomyces
sp. Tu6071]
Length = 251
Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats.
Identities = 88/241 (36%), Positives = 132/241 (54%), Gaps = 5/241 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A+ + P H+ +MDGNGRWA R LPR AGHR +I+ AA G++ L+++A
Sbjct: 8 AATRTGRGPRHVACVMDGNGRWAERRSLPRTAGHRAAETTVIDIIEAARSAGVEWLSLYA 67
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRL-SLDDDILCVLKEAE 121
FS NW RP +E+ L+ L++ + K L I+ R +G + + + +
Sbjct: 68 FSTENWSRPSAEVGYLMDLVRHTVHKHAPLLHARGIRCRFLGADDARVPEGLARDFADLT 127
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T N G+ L IAF++ R +I A +++ V + +V A +L D PD
Sbjct: 128 TLTAGNRGMTLTIAFDHGGRGDIVAAARSLI----RAGVPAEEVTERSFATHLPFPDTPD 183
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRT GE+R+S+F+LWQVAY+E+VF WPDF F L+ Y R+RRFGG+
Sbjct: 184 VDLVIRTSGEQRISNFMLWQVAYAEWVFPTVLWPDFRAPHFLECLHHYRHRERRFGGVPA 243
Query: 242 K 242
+
Sbjct: 244 Q 244
>gi|332674022|gb|AEE70839.1| di-trans,poly-cis-decaprenylcistransferase [Helicobacter pylori 83]
Length = 234
Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats.
Identities = 86/229 (37%), Positives = 135/229 (58%), Gaps = 1/229 (0%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE+ L+K++K +LK + NNI+ + IG+ ++ + + E TR
Sbjct: 66 KSEVDFLMKMLKKYLKDERSTYLDNNIRFKAIGDLEGFSKELRDTILQLESDTRHFKDFT 125
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+A NY S++EISRA K++ + S +++ I+ LDT ++P+ DL++RTGGE
Sbjct: 126 QVLALNYGSKNEISRAFKSLLESPPSNINLLESLENE-ISNRLDTRNLPEVDLLLRTGGE 184
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELK 233
>gi|34558343|ref|NP_908158.1| undecaprenyl pyrophosphate synthase [Wolinella succinogenes DSM
1740]
gi|42559944|sp|Q7M7V7|UPPS_WOLSU RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|34484062|emb|CAE11058.1| PUTATIVE UNDECAPRENYL DIPHOSPHATE SYNTHASE [Wolinella succinogenes]
Length = 228
Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats.
Identities = 87/228 (38%), Positives = 132/228 (57%), Gaps = 7/228 (3%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA RG R GH KG E EI ++ I LT++AFS NW+RP
Sbjct: 8 KHLAIIMDGNGRWAQERGKQRVRGHEKGAETIREITMFCSKSDISFLTLYAFSTENWKRP 67
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
+E+ L++L+ +LKK KNNI+ + IG+ +L ++ ++ +GL
Sbjct: 68 KTEVDFLMRLLSDYLKKEAEVYLKNNIRFKAIGDLSRFSSRLLDEIETLTQKSASCSGLT 127
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+A NY S+DEI RA + + + +V ++++LDT+ PD D+++RTGG+
Sbjct: 128 QVLALNYGSKDEIIRATQKMIEAGV-------EVSEENLSRFLDTAFAPDVDMLVRTGGD 180
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLS++LLWQ +Y+E F P WPDF+ + ++ R RRFGG+
Sbjct: 181 YRLSNYLLWQSSYAELFFTPTLWPDFTAGELAIQIEEFKRRKRRFGGI 228
>gi|116327677|ref|YP_797397.1| undecaprenyl pyrophosphate synthase [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
gi|116330592|ref|YP_800310.1| undecaprenyl pyrophosphate synthase [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
gi|116120421|gb|ABJ78464.1| Undecaprenyl pyrophosphate synthase [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
gi|116124281|gb|ABJ75552.1| Undecaprenyl pyrophosphate synthase [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
Length = 241
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 92/237 (38%), Positives = 137/237 (57%), Gaps = 1/237 (0%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ S P HI +IMDGNGRWA + G PR GHR+G + ++ A+ E G+KN++++AFS
Sbjct: 3 LFESKFPQHIAVIMDGNGRWAVSLGKPRSEGHREGANAIDRLMDASLEFGLKNVSLYAFS 62
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRRP++EI + L+ F+ ++ I++ G+R L ++L + A ++T
Sbjct: 63 TENWRRPITEIRSIFNLLVEFIDTRLDTIHTRGIRIHHSGSRKRLTRNVLDKIDFAIEKT 122
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD-VDSSLIAKYLDTSDVPDPD 183
+ N LN+ NY S+DE+ RA + F + V + + K+L TS +P D
Sbjct: 123 KKNKNLNVNFCLNYGSKDELLRAAQEAFLRRKKEKVSFEKPLKEKELEKFLYTSTLPPVD 182
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
L+IRT GE+RLS+FLLWQ AY+E F WPDF + +L Y R R+FGGL
Sbjct: 183 LLIRTAGEQRLSNFLLWQSAYAELYFTDTLWPDFDKNSLVDSLKWYETRTRKFGGLE 239
>gi|319789895|ref|YP_004151528.1| undecaprenyl diphosphate synthase [Thermovibrio ammonificans HB-1]
gi|317114397|gb|ADU96887.1| undecaprenyl diphosphate synthase [Thermovibrio ammonificans HB-1]
Length = 230
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 97/236 (41%), Positives = 132/236 (55%), Gaps = 6/236 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M + P H+GIIMDGNGRWA RGLPR GHR G + IV AA+ +GI+ L++FAFS
Sbjct: 1 MEIENLPVHVGIIMDGNGRWAKRRGLPRIEGHRVGAQTTERIVIAASNIGIRYLSLFAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E++ L L+ +++ +NN++ R +G L + E+QT
Sbjct: 61 TENWKRPKEEVNFLFHLMYEYVRSKLNLFLENNVRFRAMGRLWELPTYLREGFAWMEEQT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
TG+ A NY R E+ A E ++ + KYL ++PD DL
Sbjct: 121 AHCTGMTAVFAVNYGGRQELLDAFNRAVAAGER------ELTEDTLRKYLYLPELPDLDL 174
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
+IRT GE R+S+FLLWQ AY+E F WPDF+ E F AL Y+ R+RRFGGL
Sbjct: 175 LIRTSGELRISNFLLWQSAYTELWFTQTLWPDFTEEEFKKALLDYSRRERRFGGLK 230
>gi|210135380|ref|YP_002301819.1| undecaprenyl pyrophosphate synthase [Helicobacter pylori P12]
gi|210133348|gb|ACJ08339.1| undecaprenyl pyrophosphate synthase [Helicobacter pylori P12]
Length = 234
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 85/229 (37%), Positives = 136/229 (59%), Gaps = 1/229 (0%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE+ L+K++K +LK + N+I+ + IG+ ++ + + E+ TR
Sbjct: 66 KSEVDFLMKMLKKYLKDERSTYLDNHIRFKAIGDLEGFSKELRETILQLENDTRHFKDFT 125
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+A NY S++EISRA K++ + S +++ I+ LDT ++P+ DL++RTGGE
Sbjct: 126 QVLALNYGSKNEISRAFKSLLESPPSNISLLESLENE-ISNRLDTHNLPEVDLLLRTGGE 184
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELK 233
>gi|26331826|dbj|BAC29643.1| unnamed protein product [Mus musculus]
Length = 333
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 83/240 (34%), Positives = 128/240 (53%), Gaps = 6/240 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IMDGN R+A + R GH +G E + +GI +T++AFS
Sbjct: 20 IKAGPVPKHILFIMDGNRRYAKKCQVERQEGHTQGFNKLAETLRWCLNLGILEVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKS---FLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R SE+ L+ L + L + L+K+ + +RV+G+ L D+ + A
Sbjct: 80 IENFKRSKSEVDGLLDLARQKFSCLMEEQEKLQKHGVCIRVLGDLHLLPLDLQEKIAHAI 139
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T+ L + F Y+SR EI+ A++ + +E G + DV SL+ K L ++ P
Sbjct: 140 QATKNYNKCFLNVCFAYTSRHEIANAVREMAWGVEQGLLEPSDVSESLLDKCLYSNHSPH 199
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PD++IRT GE RLSDFLLWQ ++S VF P WP+++ A+ Q+ R G L K
Sbjct: 200 PDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLCEAILQFQ---RNHGALQK 256
>gi|328907181|gb|EGG26947.1| undecaprenyl pyrophosphate synthetase [Propionibacterium sp. P08]
Length = 233
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 83/221 (37%), Positives = 123/221 (55%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA RGL R GH +G + +++ A E+GI L+++AFS NW+R E+
Sbjct: 1 MDGNGRWAKQRGLKRTDGHARGEDALFDVIEGAIEMGIPYLSVYAFSTENWKRSPDEVRW 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ + + + L +++R G R L ++ L+ AE+Q+ NT L L N
Sbjct: 61 LMGFNRDVIHRRRDQLDAMGVRIRWAGRRPKLWKSVIKELESAEEQSADNTVLTLQFCVN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R EI A+++I + + G + + +LD ++PD DL R+ GE+R S+F
Sbjct: 121 YGGRAEIVDAVRDIARLVAEGKIDPDHITEKTFRTHLDEPEIPDVDLFWRSSGEQRTSNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
LLWQ AY+E VF WPD R + A+ +Y RDRRFGG
Sbjct: 181 LLWQSAYAEMVFSDVLWPDVDRRDLWDAVMEYAKRDRRFGG 221
>gi|58865532|ref|NP_001011978.1| dehydrodolichyl diphosphate synthase [Rattus norvegicus]
gi|55250438|gb|AAH85875.1| Dehydrodolichyl diphosphate synthase [Rattus norvegicus]
gi|149024198|gb|EDL80695.1| rCG31494 [Rattus norvegicus]
Length = 333
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 79/229 (34%), Positives = 124/229 (54%), Gaps = 3/229 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P HI IMDGN R+A + R GH +G E + +GI +T++AFS
Sbjct: 20 IKVGPVPKHIAFIMDGNRRYAKKCQVERQEGHTQGFNKLAETLRWCLNLGILEVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKS---FLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R SE+ L+ L + L + LKK+ + +RV+G+ L D+ + +A
Sbjct: 80 IENFKRSKSEVDGLLDLARQKFSCLMEEQEKLKKHGVCIRVLGDLHLLPLDLQKKIAQAV 139
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T+ L + F Y+SR EI+ A++ + +E G + DV SL+ + L ++ P
Sbjct: 140 QATKNYNKCFLNVCFAYTSRHEITNAVREMAWGVEQGLLEPSDVSESLLDQCLYSNHSPQ 199
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
PD++IRT GE RLSDFLLWQ ++S VF P WP+++ A+ Q+
Sbjct: 200 PDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLCEAILQFQ 248
>gi|317180946|dbj|BAJ58732.1| putative undecaprenyl pyrophosphate synthase [Helicobacter pylori
F32]
Length = 234
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 84/229 (36%), Positives = 134/229 (58%), Gaps = 1/229 (0%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE+ L+K++K +LK + N+I+ + IG+ ++ + + E+ T+
Sbjct: 66 KSEVDFLMKMLKKYLKDERSTYLDNHIRFKAIGDLEGFSKELRDTILQLENDTKHFKDFT 125
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+A NY S++E+SRA K++ + S + I+ LDT D+P+ DL++RTGGE
Sbjct: 126 QVLALNYGSKNELSRAFKSLLESPPSNISLLESL-EDEISNRLDTRDLPEVDLLLRTGGE 184
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELK 233
>gi|227487838|ref|ZP_03918154.1| undecaprenyl pyrophosphate synthetase [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227542478|ref|ZP_03972527.1| undecaprenyl pyrophosphate synthetase [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227092165|gb|EEI27477.1| undecaprenyl pyrophosphate synthetase [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227181676|gb|EEI62648.1| undecaprenyl pyrophosphate synthetase [Corynebacterium
glucuronolyticum ATCC 51866]
Length = 256
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 77/243 (31%), Positives = 122/243 (50%), Gaps = 8/243 (3%)
Query: 2 VASMMSSSP-PDHIGIIMDGNGRWAAARGL-PRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ ++ P P H+ ++ DGN RWA G GHR G + E++ + ++ +T
Sbjct: 16 LRRVIKDRPQPRHVAVMCDGNRRWAREAGFADVSHGHRVGAKKIGELIRWCEDTKVEIVT 75
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++ S N +R E+ L +I + + S N ++R++G+ L + I +
Sbjct: 76 VYLLSTENLKRSSEEVGLLFDIIADVVDEL--SATDLNCRIRLVGHMDLLPEKISTRMAR 133
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLD 175
+T +TG+ + IA Y R EI A++ + + + + ++++L
Sbjct: 134 GAAKTADHTGVVVNIAVGYGGRQEIVDAVQALVNEEAEKGTPADKIADAVTIESLSRHLY 193
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
T D PDPDL+IRT GE+RLS FLLWQ AYSE F YWP F R F AL ++ R RR
Sbjct: 194 TRDQPDPDLVIRTSGEQRLSGFLLWQAAYSEIWFTDTYWPAFRRIDFLRALRDFSSRSRR 253
Query: 236 FGG 238
FG
Sbjct: 254 FGK 256
>gi|254381930|ref|ZP_04997293.1| undecaprenyl pyrophosphate synthetase 1 [Streptomyces sp. Mg1]
gi|194340838|gb|EDX21804.1| undecaprenyl pyrophosphate synthetase 1 [Streptomyces sp. Mg1]
Length = 253
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 81/239 (33%), Positives = 127/239 (53%), Gaps = 7/239 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ + P HIG+I+DGN RWA A G GH+ G + +E++ E ++ +T++
Sbjct: 17 GRIDHDAAPKHIGVILDGNRRWAKASGGTTEQGHQAGADKISEMLGWCTETDVEVVTLWM 76
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
S +N RP E+ L+ +I++ ++ +V +GN L + VLKEAE
Sbjct: 77 LSTDNLDRPEVELRPLLNIIENTVRGL---AADGRWRVHHVGNLDILPERTQSVLKEAEQ 133
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLDTSD 178
T G+ + +A Y R EI+ A++++ + ++ D IA++L T
Sbjct: 134 ATHDVDGILVNVAVGYGGRQEIADAVRSLLLEHAEKGTSFEELAEILDIDHIAEHLYTRG 193
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDPDL+IRT GE+RLS F+LWQ A+SE+ F +WP F + F AL Y R RR+G
Sbjct: 194 QPDPDLVIRTSGEQRLSGFMLWQSAHSEYYFCEVFWPAFRKVDFLRALRDYAARHRRYG 252
>gi|241667395|ref|ZP_04754973.1| di-trans,poly-cis-decaprenylcistransferase [Francisella
philomiragia subsp. philomiragia ATCC 25015]
gi|254875944|ref|ZP_05248654.1| undecaprenyl pyrophosphate synthetase [Francisella philomiragia
subsp. philomiragia ATCC 25015]
gi|254841965|gb|EET20379.1| undecaprenyl pyrophosphate synthetase [Francisella philomiragia
subsp. philomiragia ATCC 25015]
Length = 245
Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats.
Identities = 92/241 (38%), Positives = 135/241 (56%), Gaps = 3/241 (1%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
S+ + + H+ IIMDGNGRWA +R PR GHR I + + E I+ LT+FA
Sbjct: 1 MSLANENALKHVAIIMDGNGRWAKSRLKPRIFGHRNSISSVDAAIEYCVERNIQMLTLFA 60
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
F +NW RP E+S+L+ L LK L NNI ++VIG+R L D ++ ++ +E
Sbjct: 61 FGRDNWLRPAKEVSDLMDLFYKTLKDKTPKLHSNNIVLKVIGDRSRLSDKLIQMIDYSES 120
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT-SDVPD 181
T+ NTGL L +A +Y R +I A+K+I DI +G + ++ T +
Sbjct: 121 VTKDNTGLQLRLAVDYGGRWDIISAMKSIIDDIGNGKIALDNISEDNFGS--YTVAGQMP 178
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRT GE RLSDF+LWQ++Y+E F WP+F++ F A + R RRFG +
Sbjct: 179 VDLLIRTSGEIRLSDFMLWQLSYAEMYFTDLMWPEFTKSEFQKAEEYFYSRQRRFGKSGE 238
Query: 242 K 242
+
Sbjct: 239 Q 239
>gi|317178484|dbj|BAJ56272.1| putative undecaprenyl pyrophosphate synthase [Helicobacter pylori
F30]
Length = 234
Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats.
Identities = 84/229 (36%), Positives = 135/229 (58%), Gaps = 1/229 (0%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE+ L+K++K +LK + N+I+ + IG+ ++ + + E+ T
Sbjct: 66 KSEVDFLMKMLKKYLKDERSTYLDNHIRFKAIGDLEGFSKELRDTILQLENDTGHFKDFT 125
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+A NY S++EISRA K++ + S +++ I+ LDT ++P+ DL++RTGGE
Sbjct: 126 QVLALNYGSKNEISRAFKSLLESPPSNISLLESLENE-ISNRLDTHNLPEVDLLLRTGGE 184
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELK 233
>gi|260459218|ref|ZP_05807473.1| undecaprenyl diphosphate synthase [Mesorhizobium opportunistum
WSM2075]
gi|259034772|gb|EEW36028.1| undecaprenyl diphosphate synthase [Mesorhizobium opportunistum
WSM2075]
Length = 222
Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats.
Identities = 102/210 (48%), Positives = 138/210 (65%)
Query: 30 LPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKG 89
+PR AGHR G+E + V AA ++GI LT++AFS NW RP SE+S+L+ L+K F+++
Sbjct: 1 MPRLAGHRAGVEALRKTVRAAPDLGISFLTVYAFSSENWSRPKSEVSDLMGLLKLFIRRD 60
Query: 90 FYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIK 149
L ++ ++VR+IG+R L DI +L EAE T N L L IAFNY RDEI R +
Sbjct: 61 LADLHQSGVRVRIIGDRTGLQADIRGLLDEAESLTANNEALTLVIAFNYGGRDEIVRTAR 120
Query: 150 NIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVF 209
+ + G + S + + A LDT +PDP+L+IRT GE RLS+FLLWQ AYSE VF
Sbjct: 121 KLASAVARGEIDSEAITAENFAGLLDTQGIPDPELVIRTSGELRLSNFLLWQAAYSELVF 180
Query: 210 IPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+P YWPDF+RE AL ++ R+RRFGGL
Sbjct: 181 LPCYWPDFNREHLAEALREFAGRERRFGGL 210
>gi|317009901|gb|ADU80481.1| undecaprenyl pyrophosphate synthase [Helicobacter pylori India7]
Length = 234
Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats.
Identities = 85/229 (37%), Positives = 136/229 (59%), Gaps = 1/229 (0%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ +IMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 6 KHLAVIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE+ L+K++K +LK + NNI+ + IG+ ++ + + E+ TR
Sbjct: 66 KSEVDFLMKMLKKYLKDERSTYLDNNIRFKAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+A NY S++E+SRA K++ + S +++ I+ LDT D+P+ DL++RTGGE
Sbjct: 126 QVLALNYGSKNELSRAFKSLLESPPSHISLLESLENE-ISNRLDTRDLPEVDLLLRTGGE 184
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELK 233
>gi|28493253|ref|NP_787414.1| undecaprenyl pyrophosphate synthase [Tropheryma whipplei str.
Twist]
gi|28572635|ref|NP_789415.1| undecaprenyl pyrophosphate synthetase [Tropheryma whipplei TW08/27]
gi|42559958|sp|Q83GJ0|UPPS1_TROWT RecName: Full=Undecaprenyl pyrophosphate synthase 1; Short=UPP
synthase 1; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase 1;
AltName: Full=Undecaprenyl diphosphate synthase 1;
Short=UDS 1
gi|42559959|sp|Q83HN8|UPPS2_TROW8 RecName: Full=Undecaprenyl pyrophosphate synthase 2; Short=UPP
synthase 2; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase 2;
AltName: Full=Undecaprenyl diphosphate synthase 2;
Short=UDS 2
gi|28410767|emb|CAD67153.1| undecaprenyl pyrophosphate synthetase [Tropheryma whipplei TW08/27]
gi|28476294|gb|AAO44383.1| undecaprenyl pyrophosphate synthetase [Tropheryma whipplei str.
Twist]
Length = 249
Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats.
Identities = 89/234 (38%), Positives = 138/234 (58%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ S P H+ ++MDGNGRWA R LPR GH+ G ++VA A +VG+ L+++ FS
Sbjct: 16 IPRKSLPRHVAVVMDGNGRWANQRNLPRIEGHKAGESALIDVVAGAVQVGVPYLSLYVFS 75
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW R E+ L++ + + + ++VR G L ++ L++ E+ T
Sbjct: 76 TENWLRAPDEVRFLLRFTRDVIARRRELFAHWGVRVRWSGVPNRLGKVLVKELRDTEEIT 135
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ NT +NL + NY SR EI AIK+I D+ SG + + V+ +I++ + D PD DL
Sbjct: 136 KKNTAMNLNVCLNYGSRQEIVNAIKSIVSDVNSGLISAKSVNEKIISRRMYMPDFPDVDL 195
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+R+ GE R+S+F+LWQ AY+E +F+ + WPDF R+ F+ AL Y+ R RRFG
Sbjct: 196 FLRSSGENRMSNFMLWQSAYAELIFMSKLWPDFRRDDFWAALRAYSGRSRRFGR 249
>gi|317177963|dbj|BAJ55752.1| putative undecaprenyl pyrophosphate synthase [Helicobacter pylori
F16]
Length = 234
Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats.
Identities = 85/229 (37%), Positives = 136/229 (59%), Gaps = 1/229 (0%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE+ L+K++K +LK + N+I+ + IG+ ++ + + E+ TR
Sbjct: 66 KSEVDFLMKMLKKYLKDERSTYLDNHIRFKAIGDLEGFSKELRDTILKLENDTRHFKDFT 125
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+A NY S++EISRA K++ + S +++ I+ LDT ++P+ DL++RTGGE
Sbjct: 126 QVLALNYGSKNEISRAFKSLLESPPSNISLLESLENE-ISNRLDTRNLPEVDLLLRTGGE 184
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELK 233
>gi|158301316|ref|XP_321028.4| AGAP002026-PA [Anopheles gambiae str. PEST]
gi|157012412|gb|EAA01246.5| AGAP002026-PA [Anopheles gambiae str. PEST]
Length = 312
Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats.
Identities = 82/233 (35%), Positives = 123/233 (52%), Gaps = 3/233 (1%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + + P H+ IMDGN R+A + + GH G E +E + EVGI +T++
Sbjct: 24 IRVLQAGPIPRHVAFIMDGNRRYARKANIAKAEGHSAGFEKLSETLQWCLEVGITEVTVY 83
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKK---GFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
AFSI N++R E+ L+ L + ++ L + I +R+IGN L+ DI +
Sbjct: 84 AFSIENFKRTQEEVDTLMNLARDKFQRLLAERDKLHERGICIRIIGNWDLLEPDIRRSIA 143
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
EA TR N L +AF Y+SRDEI+ +I+ + Q + G + DV L+ + L T
Sbjct: 144 EAVLLTRHNRKAILNVAFAYTSRDEITHSIRTVAQAVGDGQLEPDDVSEELLTRCLYTKY 203
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
+PDL++RT GE RLSDFLLWQ A + F WP+F+ A+ Y
Sbjct: 204 SAEPDLLVRTSGEVRLSDFLLWQSATTVMYFTETLWPEFTIWHLLGAVFSYQR 256
>gi|271969714|ref|YP_003343910.1| Z-farnesyl diphosphate synthase [Streptosporangium roseum DSM
43021]
gi|270512889|gb|ACZ91167.1| Z-farnesyl diphosphate synthase [Streptosporangium roseum DSM
43021]
Length = 255
Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats.
Identities = 90/232 (38%), Positives = 127/232 (54%), Gaps = 9/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+G+I+DGN RWA + G+ GHRKG + +E++ E G++ +T++ S N
Sbjct: 27 PRHVGVIVDGNRRWARSMGIDDVSRGHRKGADKISELLGWCREAGVEVVTVWLLSSENIN 86
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ LVK+I+ L + + +G L D VLK A++ T G
Sbjct: 87 RSKDELDLLVKIIEDV----VQELVADGWHINPMGALDLLPDHTAHVLKNAKEATSHRPG 142
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLDTSDVPDPDLI 185
L + +A Y R EI+ A++++ Q+ S D+ D IA++L T PDPDL+
Sbjct: 143 LIVNVAVGYGGRREIADAVRSLLQEHASKGASIEDLVEVLDVEHIAEHLYTRGQPDPDLV 202
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRT GE+RLS FLLWQ A+SEF F YWPDF R F AL Y R RR+G
Sbjct: 203 IRTSGEQRLSGFLLWQSAHSEFYFCEAYWPDFRRVDFLRALRSYAARHRRYG 254
>gi|85708127|ref|ZP_01039193.1| hypothetical protein NAP1_02790 [Erythrobacter sp. NAP1]
gi|85689661|gb|EAQ29664.1| hypothetical protein NAP1_02790 [Erythrobacter sp. NAP1]
Length = 225
Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats.
Identities = 91/227 (40%), Positives = 141/227 (62%), Gaps = 9/227 (3%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA RGLPR GH++G+E +V + + LT++AFS NW+R
Sbjct: 7 KHVAIIMDGNGRWAKKRGLPRAVGHQRGVEAVRRLVRGLDPMALDCLTLYAFSSENWKRS 66
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E+ +L+ L++ F+K N++K+++IGN +L DI+ +L++A ++T + L
Sbjct: 67 EDEVDDLMNLMRKFIKSDLEEFVANDVKLKIIGNWKALAPDIVAMLEDALERTSGGSKL- 125
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L +A NY ++DEI+R + + + ++ + I LDT+D+P DL+IRT GE
Sbjct: 126 LAVALNYGAQDEIAR--------AAAQAAEAGEITAETIEAQLDTADLPPLDLLIRTSGE 177
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
RLS+FLLWQ AY+E +F+ WPDF E AL+ + R+RR+GG
Sbjct: 178 IRLSNFLLWQAAYAEMLFVDTLWPDFKPEHLSQALDDFARRERRYGG 224
>gi|308062500|gb|ADO04388.1| undecaprenyl pyrophosphate synthase [Helicobacter pylori Cuz20]
Length = 234
Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats.
Identities = 85/229 (37%), Positives = 135/229 (58%), Gaps = 1/229 (0%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHRLECLTLYAFSTENWKRP 65
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE+ L+K++K +LK + NNI+ + IG+ ++ + + E+ T
Sbjct: 66 KSEVDFLMKMLKKYLKDERSTYLDNNIRFKAIGDLEGFSKELRETILQLENDTGHFKDFT 125
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+A NY S++E+SRA K++ + S +++ I+ LDT D+P+ DL++RTGGE
Sbjct: 126 QVLALNYGSKNELSRAFKSLLESPPSNISLLESLENE-ISNRLDTRDLPEVDLLLRTGGE 184
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELK 233
>gi|42559893|sp|Q9RRP1|UPPS_DEIRA RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
Length = 274
Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats.
Identities = 83/238 (34%), Positives = 125/238 (52%), Gaps = 6/238 (2%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ P H+G+I+DGN R+A A GL R GH G + +E++ E+GI + TI+ S +
Sbjct: 37 NGKLPRHLGLILDGNRRFARAAGLQREMGHSFGADKAHEVLQWCLELGIPSATIWVLSTD 96
Query: 67 NWRRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
N R +E++ ++ L++ ++ + N ++VR IG + +L L E+ T
Sbjct: 97 NGSREPAELAHILSLLEREARQLAVDPRIHANRVRVRAIGQHDNFPPQVLAALNNLEEST 156
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNI----FQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
G+ L IA Y R+EI A+++ + + ++ I +L +D P
Sbjct: 157 AGYEGMRLNIAVGYGGREEIVDAVQSYLRTQAAQGATLEQAAENLTPDAIGAHLYAADQP 216
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DPD IIRT GE RLS F+LWQ YSE+ F YWP F R F AL + RDRRFG
Sbjct: 217 DPDFIIRTSGEIRLSGFMLWQSVYSEYYFCDVYWPGFRRVDFLRALRDFQGRDRRFGK 274
>gi|167626814|ref|YP_001677314.1| undecaprenyl pyrophosphate synthase [Francisella philomiragia
subsp. philomiragia ATCC 25017]
gi|167596815|gb|ABZ86813.1| Di-trans,poly-cis-decaprenylcistransferase [Francisella
philomiragia subsp. philomiragia ATCC 25017]
Length = 245
Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats.
Identities = 92/241 (38%), Positives = 135/241 (56%), Gaps = 3/241 (1%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
S+ + + H+ IIMDGNGRWA +R PR GHR I + + E I+ LT+FA
Sbjct: 1 MSLANENALKHVAIIMDGNGRWAKSRLKPRIFGHRNSISSVDAAIEYCVERNIQMLTLFA 60
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
F +NW RP E+S+L+ L LK L NNI ++VIG+R L D ++ ++ +E
Sbjct: 61 FGRDNWLRPAKEVSDLMDLFYKTLKDKTPKLHSNNIILKVIGDRSRLSDKLMQMIDYSES 120
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT-SDVPD 181
T+ NTGL L +A +Y R +I A+K+I DI +G + ++ T +
Sbjct: 121 VTKDNTGLQLRLAVDYGGRWDIISAVKSIIDDIGNGKIALDNISEDNFGS--YTVAGQMP 178
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRT GE RLSDF+LWQ++Y+E F WP+F++ F A + R RRFG +
Sbjct: 179 VDLLIRTSGEIRLSDFMLWQLSYAEMYFTDLMWPEFTKSEFQKAEEYFYSRQRRFGKSGE 238
Query: 242 K 242
+
Sbjct: 239 Q 239
>gi|325189482|emb|CCA23970.1| undecaprenyl pyrophosphate synthetase putative [Albugo laibachii
Nc14]
Length = 353
Score = 249 bits (635), Expect = 4e-64, Method: Composition-based stats.
Identities = 84/231 (36%), Positives = 134/231 (58%), Gaps = 1/231 (0%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ +IMDGN R+ A+ GH G + E G++ LT++AFS NW
Sbjct: 123 KIPKHLAVIMDGNRRFGKAKYGLSVRGHADGSRTLVSFIEWCMEFGVEILTVYAFSSENW 182
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRV-IGNRLSLDDDILCVLKEAEDQTRLN 127
RP EI L+ L F++ + +I++RV + N L ++ ++E E T
Sbjct: 183 NRPQDEIDTLLGLFDQFMQDIIPQALEKDIRIRVHVTNSEKLPHHVIAAIQETEKTTAQC 242
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L L I +Y +R+E+ A K I + IESG +C+ D++ ++I+ +L T D+PDPD+++R
Sbjct: 243 QRLQLNICASYGAREELVSAFKQIGEKIESGYMCAADINEAVISNHLLTRDIPDPDVLLR 302
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
T GE R+S+FLL+Q+AY+E +F + WP+F ++ F L +Y+ R RRFG
Sbjct: 303 TSGEHRISNFLLYQIAYTELIFADKLWPEFKKQDFIAFLREYSQRQRRFGK 353
>gi|326331047|ref|ZP_08197346.1| di-trans,poly-cis-decaprenylcistransferase [Nocardioidaceae
bacterium Broad-1]
gi|325951258|gb|EGD43299.1| di-trans,poly-cis-decaprenylcistransferase [Nocardioidaceae
bacterium Broad-1]
Length = 258
Score = 249 bits (635), Expect = 4e-64, Method: Composition-based stats.
Identities = 85/242 (35%), Positives = 124/242 (51%), Gaps = 7/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M+ + S P H+G+++DGN RWA G GHR G ++ E+GI+ +T+
Sbjct: 20 MLRKLDVSKLPKHVGVMLDGNRRWAKEVGQSTAHGHRAGAANIEPLLTWCDEIGIEVVTL 79
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N RP E++ L+++I + ++ +G L D + LK A
Sbjct: 80 WLLSTDNLNRPAEELAPLLEIIADAVDSLADE---RRWRLHPVGALDLLPDWLAHRLKAA 136
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDT 176
E+ TR G+ + +A Y R EI+ A++ + + S + +D IA +L T
Sbjct: 137 EEATRDVDGMLVNVAVGYGGRREIADAVRALLNEHASRGTSLEELAQIIDVEHIADHLYT 196
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
PDPDL+IRT GE+RL FLLWQ A SEF F YWPDF R F AL Y R+RR
Sbjct: 197 KGQPDPDLVIRTSGEQRLGGFLLWQSAKSEFYFCEAYWPDFRRTDFLRALRAYAHRERRL 256
Query: 237 GG 238
G
Sbjct: 257 GR 258
>gi|38233525|ref|NP_939292.1| putative undecaprenyl pyrophosphate synthetase [Corynebacterium
diphtheriae NCTC 13129]
gi|42559925|sp|P60480|UPPS1_CORDI RecName: Full=Undecaprenyl pyrophosphate synthase 1; Short=UPP
synthase 1; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase 1;
AltName: Full=Undecaprenyl diphosphate synthase 1;
Short=UDS 1
gi|38199785|emb|CAE49448.1| Putative undecaprenyl pyrophosphate synthetase [Corynebacterium
diphtheriae]
Length = 265
Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats.
Identities = 85/243 (34%), Positives = 127/243 (52%), Gaps = 7/243 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGL-PRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
++ + P+H+ I+ DGN RWA G GHR G + E+V A ++ +T
Sbjct: 25 LMREIQGVRQPEHVAIMCDGNRRWAREAGFADVTHGHRVGAKKIGEMVRWCAHTDVELVT 84
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++ S N R E+ L +I + + + + N ++R++G+ L DD+ L +
Sbjct: 85 VYLLSTENLGRASDELQMLFDIIGDVVDEL--ASPETNCRLRLVGHLDLLPDDVSRRLTQ 142
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCS----HDVDSSLIAKYLD 175
A+D T NTG+ + +A Y R EI A++ + + + + I+K+L
Sbjct: 143 AQDSTNDNTGVFVNVAVGYGGRQEIVDAVRELIDAEAAAGTTATEMAEKISVDSISKHLY 202
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
TS PDPDL+IRT GE+RLS FLLWQ AYSE F YWP F R F AL +Y+ R RR
Sbjct: 203 TSGQPDPDLVIRTSGEQRLSGFLLWQAAYSEIWFTDTYWPAFRRVDFLRALREYSKRSRR 262
Query: 236 FGG 238
FG
Sbjct: 263 FGK 265
>gi|162447993|ref|YP_001621125.1| undecaprenyl pyrophosphate synthetase [Acholeplasma laidlawii
PG-8A]
gi|161986100|gb|ABX81749.1| undecaprenyl pyrophosphate synthetase [Acholeplasma laidlawii
PG-8A]
Length = 222
Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats.
Identities = 92/235 (39%), Positives = 134/235 (57%), Gaps = 13/235 (5%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M + P H+ II+DGNGRWA LPR AGH +G +I A + GI+ LT++AFS
Sbjct: 1 MKIQNLPKHVAIILDGNGRWAKRLHLPRSAGHYQGGLNLAKIAEHANKRGIEELTVYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+ L+ + K + + NI++R G + L DIL ++ ED+T
Sbjct: 61 TENWKRPQDEVEYLMTKPIEVVGKNKARICQANIRIRFKGRKDRLSKDILELMDSLEDET 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ TG+ + + +Y S DE+ AIK + +D + + ++L + DL
Sbjct: 121 KDFTGMTINVCIDYGSYDELITAIKQM-----------DVIDEAHLEQHLMVN--RPVDL 167
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRTGGE+RLS+FLLWQ+AY+E F YWP F + F AL +Y+ R RRFGGL
Sbjct: 168 LIRTGGEQRLSNFLLWQIAYAELYFTKRYWPAFKIKHFDRALKEYSKRQRRFGGL 222
>gi|284989528|ref|YP_003408082.1| undecaprenyl diphosphate synthase [Geodermatophilus obscurus DSM
43160]
gi|284062773|gb|ADB73711.1| undecaprenyl diphosphate synthase [Geodermatophilus obscurus DSM
43160]
Length = 259
Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats.
Identities = 89/243 (36%), Positives = 135/243 (55%), Gaps = 7/243 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPR-CAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ ++ ++ P H+G+I+DGN RWA A GL AGHR+G + + E G++ +T
Sbjct: 19 LAQALEGAAIPRHVGVIVDGNRRWARAIGLEDPNAGHRRGADKIASFLGWCDEAGVEVVT 78
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
+F S +N RP E+ L+++I+ + + ++R +G L + + VLK+
Sbjct: 79 LFLLSTDNLSRPEPELLPLLRIIEGVAEDL--AAPDRRWQLRPVGALELLPAETVAVLKQ 136
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLD 175
A + TR G + +A Y R EI+ A++++ + + ++ D IA++L
Sbjct: 137 AAEDTRDRPGATVNLAVGYGGRREIADAVRSLLAEHAARGTTLDELVGVLDVEHIAEHLY 196
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
T PDPDL+IRT GE+RLS FLLWQ A+SEF F YWPDF R F AL Y R RR
Sbjct: 197 TRGQPDPDLVIRTSGEQRLSGFLLWQTAHSEFHFTDVYWPDFRRVDFLRALRAYAARHRR 256
Query: 236 FGG 238
FGG
Sbjct: 257 FGG 259
>gi|227503135|ref|ZP_03933184.1| undecaprenyl diphosphate synthase [Corynebacterium accolens ATCC
49725]
gi|227076196|gb|EEI14159.1| undecaprenyl diphosphate synthase [Corynebacterium accolens ATCC
49725]
Length = 223
Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats.
Identities = 83/223 (37%), Positives = 128/223 (57%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA +G+ R GHR+G V ++V A G+ L+ +AFS NWRR E+
Sbjct: 1 MDGNGRWAQEKGMKRTEGHRRGEAVLLDVVDACLAAGVPYLSAYAFSTENWRRSPEEVRF 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ + L++ L + ++V +G R L ++ L+ AE+ T+ NT + L + N
Sbjct: 61 LMGFNRDVLRRQREWLHERGVRVVWVGRRPRLWRSVIKELEAAEELTKNNTKMTLAMCVN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R E+ ++ I + + +G + D+ S IA+ L +PD DL +R GEKR S+F
Sbjct: 121 YGGRAEMVDGVRQIAEKVAAGEIRPRDIRESTIAENLYDPGMPDVDLFLRPSGEKRTSNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LLWQ AY+E ++ + +PDF+ E F A+ +Y RDRRFG +
Sbjct: 181 LLWQSAYAEMIYQDKLFPDFTPEDLFAAIEEYARRDRRFGAVK 223
>gi|239917049|ref|YP_002956607.1| Undecaprenyl pyrophosphate synthetase [Micrococcus luteus NCTC
2665]
gi|281414488|ref|ZP_06246230.1| Undecaprenyl pyrophosphate synthetase [Micrococcus luteus NCTC
2665]
gi|239838256|gb|ACS30053.1| Undecaprenyl pyrophosphate synthetase [Micrococcus luteus NCTC
2665]
Length = 257
Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats.
Identities = 84/242 (34%), Positives = 127/242 (52%), Gaps = 5/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P HIG+++DGN RWA A G GH+ G E + + E GI +T+
Sbjct: 15 LARGLDPERLPRHIGVLVDGNRRWARAFGASTQQGHQAGAERILDFIGWCDEAGIPVVTL 74
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF-YSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
+ S N RRP E++ L+++I++ ++ + + + V+ +G L + + L E
Sbjct: 75 YMLSTENLRRPAEELAPLLEIIQTTAERLAQPAEGRAPVCVQPVGAVDLLPEPMARRLAE 134
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCS----HDVDSSLIAKYLD 175
+QT+ + G+++ +A Y R EI A++ + +D + + V IA L
Sbjct: 135 VAEQTKDHDGVHVNVAVGYGGRQEILDAVRELLRDEHALGHSAAEVAESVTVEQIADRLY 194
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
T PDPDL+IRT GE+RLS FLLWQ AYSEF F WP F + F AL Y R RR
Sbjct: 195 TRGQPDPDLVIRTSGEQRLSGFLLWQSAYSEFYFCEAMWPAFRKVDFLRALRDYGSRQRR 254
Query: 236 FG 237
FG
Sbjct: 255 FG 256
>gi|305662458|ref|YP_003858746.1| Undecaprenyl pyrophosphate synthetase [Ignisphaera aggregans DSM
17230]
gi|304377027|gb|ADM26866.1| Undecaprenyl pyrophosphate synthetase [Ignisphaera aggregans DSM
17230]
Length = 282
Score = 248 bits (634), Expect = 5e-64, Method: Composition-based stats.
Identities = 84/243 (34%), Positives = 125/243 (51%), Gaps = 5/243 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P H+ II DGN RWA GL GH G E++ ++GIK +TI
Sbjct: 40 LYNQIKDKQMPMHVAIIPDGNRRWARQLGLDPKEGHVHGYMKMKEVLQWLYDLGIKIVTI 99
Query: 61 FAFSINN-WRRPVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVL 117
+A S N R E L ++I + ++ S ++K I V+V G ++
Sbjct: 100 YAMSYENCLYRSEDEKERLFEIIANGFRELMSSGIIEKYGIHVKVFGKLELAKKTLVEEA 159
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
K+ E + N L IA Y R EI A+K I ++++ G + ++ + K L TS
Sbjct: 160 KKLEQISINNRERYLNIALCYGGRQEIVDAVKAIAEEVKRGILDPSEITEETLLKKLSTS 219
Query: 178 DVP--DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
+P +PDL+IRT GE R+S+FLLWQ+AYSE F YWP+F + + A+ Y R+RR
Sbjct: 220 HLPIPEPDLVIRTSGELRISNFLLWQIAYSELYFCDVYWPNFRKIDLYRAIRSYQSRERR 279
Query: 236 FGG 238
FG
Sbjct: 280 FGR 282
>gi|331005982|ref|ZP_08329327.1| Undecaprenyl pyrophosphate synthetase [gamma proteobacterium
IMCC1989]
gi|330420227|gb|EGG94548.1| Undecaprenyl pyrophosphate synthetase [gamma proteobacterium
IMCC1989]
Length = 244
Score = 248 bits (634), Expect = 5e-64, Method: Composition-based stats.
Identities = 94/238 (39%), Positives = 137/238 (57%), Gaps = 1/238 (0%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M +S H+ IIMDGN RWA +G+ +GH+ G+E ++++A + I LT+FAFS
Sbjct: 1 MTASPSLKHVAIIMDGNNRWAKQQGMMGVSGHKAGVERLRDVLSACKDHNINVLTVFAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+RP E+ L+ L +L LKK +++RV+G+R +L + +AE
Sbjct: 61 SENWQRPEKEVDALMSLFYLYLSNEAKKLKKEGVRLRVMGSRDRFSPKLLKAIDKAEQVA 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
L IA +Y + ++++A K I Q + G +DS L+A LD D+P DL
Sbjct: 121 CEGDR-TLVIAADYGGQWDVAQAAKKIAQKVLQGDCAIDAIDSGLVASCLDLPDLPPLDL 179
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+IRTGGEKR+S+FLLWQ AY+E F WPDF RE A+++Y R RRFG S +
Sbjct: 180 LIRTGGEKRISNFLLWQAAYAELYFSDALWPDFDREALTAAVDEYGNRQRRFGLTSDQ 237
>gi|302536608|ref|ZP_07288950.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. C]
gi|302445503|gb|EFL17319.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. C]
Length = 253
Score = 248 bits (634), Expect = 5e-64, Method: Composition-based stats.
Identities = 81/231 (35%), Positives = 124/231 (53%), Gaps = 7/231 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIG+I+DGN RWA A G GH+ G + +E++ E ++ +T++ S +N R
Sbjct: 25 PKHIGVILDGNRRWAKASGGTTEQGHQAGADKISEMLGWCTETDVEVVTLWMLSTDNLDR 84
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ +I++ ++ +V +GN L VLKEAE T G+
Sbjct: 85 PEVELRPLLNIIENTVRGLAE---DGRWRVHHVGNLDILPARTQTVLKEAEQATHDIDGI 141
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLDTSDVPDPDLII 186
+ +A Y R EI+ A++++ + ++ D IA++L T PDPDL+I
Sbjct: 142 LVNVAVGYGGRQEIADAVRSLLLEHAEKGTSFEELAEVLDIDHIAEHLYTRGQPDPDLVI 201
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE+RLS F+LWQ A+SE+ F +WP F + F AL Y R RR+G
Sbjct: 202 RTSGEQRLSGFMLWQSAHSEYYFCEVFWPAFRKVDFLRALRDYAARHRRYG 252
>gi|226355020|ref|YP_002784760.1| undecaprenyl pyrophosphate synthase [Deinococcus deserti VCD115]
gi|226317010|gb|ACO45006.1| putative Undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans,poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS) [Deinococcus
deserti VCD115]
Length = 276
Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats.
Identities = 89/237 (37%), Positives = 127/237 (53%), Gaps = 6/237 (2%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
P H+G+I+DGN R+A A GL R GH G E +E++ E+GI TI+ S +N
Sbjct: 40 GKLPRHLGLILDGNRRFARAAGLQREMGHSFGAEKAHEVLQWCLELGIPAATIWVLSTDN 99
Query: 68 WRRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
R E++ ++ L++ + + N ++VR IG + +L L+E E++T
Sbjct: 100 TSRDPQELAHILALLEKEARNLATDPRIHANRVRVRAIGQHANFPSHVLTALRELEERTA 159
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDVPD 181
G+ L IA Y R+EI A+K Q + +V + L I+ +L +D+PD
Sbjct: 160 HYDGMRLNIAVGYGGREEIVDAVKTHLQMQAAAGRDLSEVAACLRPDDISAHLYAADIPD 219
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PD IIRT GE RLS F+LWQ YSE+ F YWP F R F AL + RDRRFG
Sbjct: 220 PDFIIRTSGEIRLSGFMLWQSVYSEYYFCDVYWPGFRRVDFLRALRDFQGRDRRFGK 276
>gi|322789612|gb|EFZ14832.1| hypothetical protein SINV_06894 [Solenopsis invicta]
Length = 286
Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats.
Identities = 80/231 (34%), Positives = 125/231 (54%), Gaps = 1/231 (0%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + + P H+ IIMDGN R+A + +PR GH KG + ++ ++GI +T++
Sbjct: 17 LKIIRTGEVPRHVAIIMDGNRRYATKQNIPRKEGHTKGFNNLLKTISLCKDLGIVEITVY 76
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
FSINN++R E+ +++ +IK F + L + +RVIGN L +DIL + A
Sbjct: 77 IFSINNFKRTKEEVDDIMNIIKCFF-EHTDKLADAGVCIRVIGNLSFLREDILKSIARAI 135
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
++ N L L +A +Y+SRDE++ AIK I + D+ +LI+ L T +
Sbjct: 136 ITSKDNNKLILNLACSYTSRDELTYAIKEITMGKMHNDILLEDITKNLISDCLYTYKSSN 195
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLR 232
PDL+IRT G RLSDFL+WQV+ + F WP+F A+ Y
Sbjct: 196 PDLLIRTSGVFRLSDFLMWQVSTTCLYFTETLWPEFDLWDLLRAIFYYQAC 246
>gi|290957833|ref|YP_003489015.1| undecaprenyl pyrophosphate synthetase [Streptomyces scabiei 87.22]
gi|260647359|emb|CBG70464.1| Putative undecaprenyl pyrophosphate synthetase [Streptomyces
scabiei 87.22]
Length = 257
Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats.
Identities = 82/238 (34%), Positives = 127/238 (53%), Gaps = 7/238 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P+HIG+I+DG+ RWA A G GH+ G E + E +K +T++ S
Sbjct: 23 LDHAQVPEHIGVIVDGSRRWAKAAGSTTMQGHQAGAHKIEEFLGWCTETDVKVVTLWLLS 82
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
+N+ RP E+ L+ +I+ ++ +V +G L + LKEAE+ T
Sbjct: 83 TDNFNRPKEELVPLLGIIEDTVRSL---AADGRWRVHHVGALDLLSPGMQRALKEAEEST 139
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSDVP 180
G+ + +A Y R EI+ A++++ + + VD +I ++L T D P
Sbjct: 140 SDIDGILVNVAIGYGGRQEIADAVRSMLLEAHDKGTSMEELAESVDIDMIGRHLYTVDQP 199
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DPDL+IRT GE+RLS F+LWQ A+SE+ F +WP F + F AL Y +R RRFGG
Sbjct: 200 DPDLVIRTSGEQRLSGFMLWQTAHSEYYFCDVFWPAFRKVDFLRALRDYAVRGRRFGG 257
>gi|296140818|ref|YP_003648061.1| undecaprenyl diphosphate synthase [Tsukamurella paurometabola DSM
20162]
gi|296028952|gb|ADG79722.1| undecaprenyl diphosphate synthase [Tsukamurella paurometabola DSM
20162]
Length = 281
Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats.
Identities = 83/233 (35%), Positives = 121/233 (51%), Gaps = 7/233 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ ++ DGN RWA A G G+R G + E++ E G++ TI+ S N R
Sbjct: 51 PRHVAVLCDGNRRWARAAGFDDVSHGYRMGAKKIAEMLEWCDEAGVELATIYLLSTENLR 110
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E++ L+++I +++ S N V+++G L + L A + T+ TG
Sbjct: 111 RDPEELAALLEIITDVVEE--ISGPDKNWSVKIVGAMDLLPEAAARRLTAAAEGTKGRTG 168
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSDVPDPDLI 185
++ +A Y R EI A+ ++ + + + V I ++L TS PDPDL+
Sbjct: 169 AHVNVAVGYGGRKEIVDAVHSLLDEKLREGASAEELADAVTVEGIDQHLYTSGQPDPDLV 228
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
IRT GE+RLS FLLWQ AYSE F YWP+F R F AL Y R RRFG
Sbjct: 229 IRTSGEQRLSGFLLWQSAYSEIWFTEAYWPEFRRVDFLRALRDYAARHRRFGA 281
>gi|242011401|ref|XP_002426439.1| Dehydrodolichyl diphosphate synthase, putative [Pediculus humanus
corporis]
gi|212510544|gb|EEB13701.1| Dehydrodolichyl diphosphate synthase, putative [Pediculus humanus
corporis]
Length = 290
Score = 248 bits (633), Expect = 6e-64, Method: Composition-based stats.
Identities = 74/233 (31%), Positives = 130/233 (55%), Gaps = 3/233 (1%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + + P HI IIMDGN R+A + + GH +G + E++ ++GI +T++
Sbjct: 17 INVIKTGYIPRHIAIIMDGNRRYANKNKVLKVEGHSRGFDKLTEVLRWCLDIGIIEVTVY 76
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLK 118
AFSI N++R E+++++ L + +K L K + +RVIG+ L D+ ++
Sbjct: 77 AFSIENFKRSEDEVNQIMNLARRKFEKLLEEKDKLIKEGVNIRVIGDLSLLPHDLFQLIS 136
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
+A T+ NT + L +AF+Y+ ++EI +I+ I + ++ + D+ L+ K L + +
Sbjct: 137 KAVYLTKDNTKVRLTVAFSYTGQNEICESIRCISKGVKEERLKLSDISMDLLGKSLYSEN 196
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
PDL+IRT GE R+SDF+LWQ +YS + F WP+F+ A+ Y
Sbjct: 197 SDVPDLVIRTSGEVRISDFMLWQSSYSCYYFTSILWPEFTFWELLKAIFFYQR 249
>gi|154149378|ref|YP_001406531.1| di-trans,poly-cis-decaprenylcistransferase [Campylobacter hominis
ATCC BAA-381]
gi|153805387|gb|ABS52394.1| di-trans,poly-cis-decaprenylcistransferase [Campylobacter hominis
ATCC BAA-381]
Length = 226
Score = 248 bits (633), Expect = 6e-64, Method: Composition-based stats.
Identities = 91/228 (39%), Positives = 131/228 (57%), Gaps = 7/228 (3%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA + L R GH G +V + + GI NLT++AFS NW+RP
Sbjct: 6 HHLAIIMDGNGRWAKTKSLARIKGHEAGAKVVETVSEFCIKNGIANLTLYAFSTENWKRP 65
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE++ L+ L+K F+ K KN IK + IG+ D+ + ++ T LN
Sbjct: 66 ESEVNFLLNLLKKFIIKKREIFIKNEIKFKAIGDISVFSQDLQSEISALQNLTATYKKLN 125
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+A NY SRDEI RA K + Q +++ ++ LD++D D DL+IRTGGE
Sbjct: 126 FNLALNYGSRDEIIRAAKKVIQKG-------DELNEQNLSANLDSADSGDVDLLIRTGGE 178
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLS+F+LWQ +Y+E F +WPDFS + + + +++RRFGGL
Sbjct: 179 IRLSNFMLWQASYAELAFTNTFWPDFSEDELAEIVENFKIKNRRFGGL 226
>gi|319940999|ref|ZP_08015336.1| Di-trans-poly-cis-decaprenylcistransferase [Sutterella
wadsworthensis 3_1_45B]
gi|319805572|gb|EFW02367.1| Di-trans-poly-cis-decaprenylcistransferase [Sutterella
wadsworthensis 3_1_45B]
Length = 236
Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats.
Identities = 96/234 (41%), Positives = 140/234 (59%), Gaps = 8/234 (3%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P H+ +IMDGNGRWA +R LPR GHRKG+E +V AAA+ G+K LT+FAFS NW
Sbjct: 6 SIPKHVAVIMDGNGRWAQSRCLPRVEGHRKGVEALERVVEAAAQRGVKTLTVFAFSSENW 65
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RRP +E++ L+KL L++ L + +++RVIG+R + + AE T +
Sbjct: 66 RRPAAEVTALMKLFALGLERWHKPLSEAGVRLRVIGDRTGFSSALNETIDAAEAATAAGS 125
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+ L IA NY R ++ +A + + ++ + K L +++ + DL++RT
Sbjct: 126 KMTLVIAANYGGRWDMLQAAQAAAAEG--------ELTMEGVEKRLCAAELGEVDLLVRT 177
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GGE+R+S+FLLWQ AY+EF F WPDF E F AL Y R+RRFG S++
Sbjct: 178 GGERRISNFLLWQAAYAEFYFTDTLWPDFDGEAFDDALAWYVGRERRFGMTSEQ 231
>gi|261838544|gb|ACX98310.1| undecaprenyl pyrophosphate synthase [Helicobacter pylori 51]
Length = 234
Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats.
Identities = 81/229 (35%), Positives = 133/229 (58%), Gaps = 1/229 (0%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE+ L+K++K +LK + N+I+ + IG+ ++ + + E+ T+
Sbjct: 66 KSEVDFLMKMLKKYLKDERSTYLDNHIRFKAIGDLEGFSKELRDTILQLENDTKHFKDFT 125
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+A NY S++E+SR + + ++ + + I+ LDT D+P+ DL++RTGGE
Sbjct: 126 QVLALNYGSKNELSR-VFKSLLESPPSNISLLESLENEISNRLDTRDLPEVDLLLRTGGE 184
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELK 233
>gi|90415797|ref|ZP_01223730.1| undecaprenyl diphosphate synthase [marine gamma proteobacterium
HTCC2207]
gi|90332171|gb|EAS47368.1| undecaprenyl diphosphate synthase [marine gamma proteobacterium
HTCC2207]
Length = 237
Score = 247 bits (632), Expect = 8e-64, Method: Composition-based stats.
Identities = 92/220 (41%), Positives = 132/220 (60%), Gaps = 1/220 (0%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGN RWA RGL AGH G+E +I+ AA GI+ +T+FAFS NW+RP E+
Sbjct: 1 MDGNNRWAKQRGLSGVAGHEAGVERIRDILHAAKARGIEVVTLFAFSSENWKRPEFEVRG 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ L S+LKK L+ + +++RV+GNR D + ++ +AE T L + +
Sbjct: 61 LMALFSSYLKKEAKKLRDDGVRLRVVGNRNQFSDRLKRLIDDAESLTASGK-FTLVLCVD 119
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I A + I +++ G + DV +AK+L T +PDPDL +RT GE+R+S+F
Sbjct: 120 YGGRWDIVTATQKIASEVQMGRLRPSDVTEDTVAKFLQTEGLPDPDLCVRTAGEQRISNF 179
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
LLWQ+AY+EF F YWPDF A+++Y R RRFG
Sbjct: 180 LLWQMAYTEFYFANCYWPDFDTAALNVAVDEYYSRQRRFG 219
>gi|206895083|ref|YP_002247440.1| di-trans,poly-cis-decaprenylcistransferase [Coprothermobacter
proteolyticus DSM 5265]
gi|206737700|gb|ACI16778.1| di-trans,poly-cis-decaprenylcistransferase [Coprothermobacter
proteolyticus DSM 5265]
Length = 227
Score = 247 bits (631), Expect = 9e-64, Method: Composition-based stats.
Identities = 82/228 (35%), Positives = 122/228 (53%), Gaps = 4/228 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+HIG I+DGN RWA GLP GH G + +K +T + FS NW+R
Sbjct: 4 PNHIGFIVDGNRRWAKEHGLPTFQGHEVGFNKVLLVTDCLLNTDVKQVTYYLFSTENWKR 63
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+S L+ L ++ K NI+VR IG + L + ++ E++T+ NTGL
Sbjct: 64 TQEEVSYLMNLGVRMVEAILEPWAKKNIRVRHIGEKDGLPLSVQKAVQRMEERTKSNTGL 123
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ +A NY + EI +A+ + Q E H + I ++L D D+I+RT G
Sbjct: 124 LVNLAINYGGKLEIVQAVNALLQQKEGL----HQISEKDIDEHLYNPDSNPVDVIVRTSG 179
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+R+S+FLLWQ AY+E +F+ +YWPD + L ++N R RRFG
Sbjct: 180 EQRISNFLLWQSAYAELIFLSKYWPDIEESDVHYVLEEFNRRQRRFGA 227
>gi|152990849|ref|YP_001356571.1| undecaprenyl diphosphate synthase [Nitratiruptor sp. SB155-2]
gi|151422710|dbj|BAF70214.1| undecaprenyl diphosphate synthase [Nitratiruptor sp. SB155-2]
Length = 225
Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats.
Identities = 87/230 (37%), Positives = 134/230 (58%), Gaps = 9/230 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAA-EVGIKNLTIFAFSINNWR 69
P HI IIMDGNGRWA +GL R GH +G ++ +I A I+ LT++AFS NW+
Sbjct: 4 PRHIAIIMDGNGRWAQEKGLNRTKGHERGAQIVRDITKYCAIHPEIEVLTLYAFSTENWK 63
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ L++L+ +L+K + ++N I+ VIG+ ++ + + +D T+ T
Sbjct: 64 RPKKEVDFLMRLLDRWLQKELPTYQENEIRFVVIGDISKFSKNLQQRIIQVQDATKNFTK 123
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L +A NY RDEI RA K ++ +++ Y D + + D D++IRTG
Sbjct: 124 LTQVLALNYGGRDEIIRACKRAAKEGC-------EINEENFENYFD-AKLGDVDMLIRTG 175
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GEKR+S+FLLW++AY+E F YWPDF+ + + ++ R RRFGG+
Sbjct: 176 GEKRISNFLLWRIAYAELFFTDTYWPDFTSKELEKLIEEFKKRQRRFGGI 225
>gi|325002198|ref|ZP_08123310.1| undecaprenyl pyrophosphate synthase [Pseudonocardia sp. P1]
Length = 256
Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats.
Identities = 86/244 (35%), Positives = 126/244 (51%), Gaps = 8/244 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGL-PRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
++ + + P H+ +I+DGN RWA GL GHR G E++ +E G++ +T
Sbjct: 15 ILRQLDGAESPKHVALILDGNRRWAREAGLADPAEGHRAGAAKIAEMLGWCSEAGVEVVT 74
Query: 60 IFAFSINNW-RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+F S +N R E+ +L+++I + S ++RV+G L + L
Sbjct: 75 VFLLSTDNLDTRSPDELKDLLEIIGGVVDDL--SGPDTPWRLRVVGAMELLPKSLADRLA 132
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYL 174
A +T GL L +A Y R EI+ A++ + ++ D IA++L
Sbjct: 133 AAVARTGERGGLQLNVAVGYGGRQEIADAVRKMLLSQAEAGRTIEELAETLDVDHIAEHL 192
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
TS PDPDL+IRT GE+RLS FLLWQ A+SEF F YWP+F R F AL + R R
Sbjct: 193 YTSGQPDPDLVIRTSGEQRLSGFLLWQSAHSEFWFCEAYWPEFRRVDFLRALRDFAARHR 252
Query: 235 RFGG 238
RFGG
Sbjct: 253 RFGG 256
>gi|314923089|gb|EFS86920.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL001PA1]
gi|314966858|gb|EFT10957.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL082PA2]
gi|314981200|gb|EFT25294.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL110PA3]
gi|315091771|gb|EFT63747.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL110PA4]
gi|315093221|gb|EFT65197.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL060PA1]
gi|315103275|gb|EFT75251.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL050PA2]
gi|315105480|gb|EFT77456.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL030PA1]
gi|327327683|gb|EGE69459.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL103PA1]
Length = 231
Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats.
Identities = 84/221 (38%), Positives = 120/221 (54%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA RGL R GH +G + +++ A E+GI L+ +AFS NW+R E+
Sbjct: 1 MDGNGRWARQRGLRRTEGHARGEDALFDVIEGAIEMGIPYLSAYAFSTENWKRSPDEVRW 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ + + + L +++R G R L ++ L+ AE Q+ NT L L N
Sbjct: 61 LMGFNRDVIHRRRDQLDAMGVRIRWAGRRPKLWKSVIKELESAEKQSADNTVLTLQFCVN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R EI A+++I + G + + +LD +VPD DL R+ GE+R S+F
Sbjct: 121 YGGRAEIVDAVRDIARLTAEGKIDPDHITEKTFRTHLDEPEVPDVDLFWRSSGEQRTSNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
LLWQ AY+E VF WPD R + A+ +Y RDRRFGG
Sbjct: 181 LLWQSAYAEMVFSDVLWPDVDRRDLWAAVMEYAKRDRRFGG 221
>gi|317182470|dbj|BAJ60254.1| putative undecaprenyl pyrophosphate synthase [Helicobacter pylori
F57]
Length = 234
Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats.
Identities = 83/229 (36%), Positives = 135/229 (58%), Gaps = 1/229 (0%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP
Sbjct: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE+ L+K++K +LK + N+I+ + IG+ ++ + + E+ T
Sbjct: 66 KSEVDFLMKMLKKYLKDERSTYLDNHIRFKAIGDLEGFSKELRDTILKLENDTGHFKDFT 125
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+A NY S++E+SRA K++ + S +++ I+ LDT ++P+ DL++RTGGE
Sbjct: 126 QVLALNYGSKNELSRAFKSLLESPPSNINLLESLENE-ISNRLDTRNLPEVDLLLRTGGE 184
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELK 233
>gi|284113717|ref|ZP_06386627.1| Di-trans-poly-cis-decaprenylcistransferase [Candidatus Poribacteria
sp. WGA-A3]
gi|283829643|gb|EFC33975.1| Di-trans-poly-cis-decaprenylcistransferase [Candidatus Poribacteria
sp. WGA-A3]
Length = 267
Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats.
Identities = 91/236 (38%), Positives = 128/236 (54%), Gaps = 7/236 (2%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
P HIG+I+DGN R+A A GL GH +G E++ E+G++ +I+ FS++N
Sbjct: 31 KIPRHIGVILDGNRRYAKASGLEDIIDGHYEGANKLEEVLHWCDELGVEIFSIWIFSLDN 90
Query: 68 WRRPVSEISELVKLIKSFLKKG--FYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
++R E+ ++ LI+ +++ L KN IKVR +G L + ++EAE+ T+
Sbjct: 91 FKRAAHEVEGILGLIERKMRELVTIEGLHKNQIKVRAMGQIELLPTSLQEAIREAEEATQ 150
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDVPD 181
L +A Y R+EI A + + H V L I YL TS++PD
Sbjct: 151 HYDKFILNVAVAYGGREEIIEAFRGHLKAESESGKPIHQVADELTVDKITPYLYTSNLPD 210
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
P+LIIRT GE RLS FLLWQ YSEF F YWP F + F AL Y+ R RRFG
Sbjct: 211 PELIIRTSGEVRLSGFLLWQSVYSEFYFCDTYWPSFRKIDFLRALRAYSQRKRRFG 266
>gi|319441740|ref|ZP_07990896.1| hypothetical protein CvarD4_08237 [Corynebacterium variabile DSM
44702]
Length = 251
Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats.
Identities = 88/243 (36%), Positives = 126/243 (51%), Gaps = 7/243 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGL-PRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
++ M P H+ I+ DGN RWA G GHR G + E+V E GI +T
Sbjct: 11 LIRFMKGRPRPSHVAIMCDGNRRWARENGFTDVTHGHRVGAKKIVEVVGWCEEQGIDTVT 70
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++ S N R E+ L+++I + + K + ++RVIG L ++ L E
Sbjct: 71 VYLLSTENLGRGADELELLMEIIGDVSDE--IASAKGDFRLRVIGRAELLPQELCDRLSE 128
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIK----NIFQDIESGSVCSHDVDSSLIAKYLD 175
AE++TR N G+ + IA Y R E+ A++ N+ + S + + + ++L
Sbjct: 129 AEERTRDNKGVRVNIAVGYGGRQEVVDAVRELIGNLAGEGVSAAEIPDRITVDSLTEHLY 188
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
TS PDPDL+IRT GE+RLS FLLWQ AYSE F YWP F R F AL ++ R RR
Sbjct: 189 TSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEIWFTETYWPAFRRMDFLRALRDFSTRQRR 248
Query: 236 FGG 238
FG
Sbjct: 249 FGK 251
>gi|86357538|ref|YP_469430.1| undecaprenyl pyrophosphate synthase protein [Rhizobium etli CFN 42]
gi|86281640|gb|ABC90703.1| undecaprenyl pyrophosphate synthase protein [Rhizobium etli CFN 42]
Length = 215
Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats.
Identities = 118/210 (56%), Positives = 157/210 (74%)
Query: 34 AGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSL 93
GHRKG+E E V AA GIK LT+FAFS NWRRP +E+S+L+ L+K+F+++ L
Sbjct: 1 MGHRKGVEAVRETVRAAGAAGIKYLTLFAFSSENWRRPEAEVSDLLGLLKAFIRRDLAEL 60
Query: 94 KKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQ 153
+ N++++VIG+R SL DIL +L EAE+ T NT L L IAFNY SRDEISRA+ ++ +
Sbjct: 61 HRQNVRIKVIGDRHSLRSDILGLLLEAEETTTDNTALTLVIAFNYGSRDEISRAVVSLAK 120
Query: 154 DIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEY 213
D+E+G + + D+ +LI LDT+ +PDPDLIIRT GE+RLS+FLLWQ AYSEF+F+PEY
Sbjct: 121 DVEAGRLRAQDITPALINARLDTAGIPDPDLIIRTSGEERLSNFLLWQAAYSEFIFVPEY 180
Query: 214 WPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
WPDFS E+F AL ++ RDRRFGGLS +
Sbjct: 181 WPDFSPEIFRSALEKFASRDRRFGGLSSQA 210
>gi|227510246|ref|ZP_03940295.1| di-trans-poly-cis-decaprenylcistransferase (undecaprenyl
diphosphate synthetase) [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227189898|gb|EEI69965.1| di-trans-poly-cis-decaprenylcistransferase (undecaprenyl
diphosphate synthetase) [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 227
Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats.
Identities = 92/220 (41%), Positives = 135/220 (61%), Gaps = 3/220 (1%)
Query: 26 AARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSF 85
LPR AGHR+G+E + AA+++G+K LT++AFS NW+RP E+S L+ L F
Sbjct: 8 KKEHLPRIAGHRQGMETVKTVTMAASKLGVKVLTLYAFSTENWKRPKDEVSFLMGLPVKF 67
Query: 86 LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEIS 145
L +NN+KV V+G L ++ +++A QT TG+ L A NY SR +I
Sbjct: 68 FNNFVPELIENNVKVSVMGLIDQLPENTQKAVRDAISQTSKCTGMILNFALNYGSRLDIR 127
Query: 146 RAIKNIFQDIESGSVCSHDVDSSLIAKYLDT---SDVPDPDLIIRTGGEKRLSDFLLWQV 202
A++NI +I++ ++ D+D LI+++L T D DPDL+IRT GE+R+S+FLLWQ+
Sbjct: 128 LAVQNIASEIKNDAISISDIDDDLISRHLMTGFLGDYADPDLLIRTSGEERISNFLLWQI 187
Query: 203 AYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
AYSE VF WPDF + + +Y R+RRFGGL +
Sbjct: 188 AYSELVFTDALWPDFDGQTLRQMIFEYQHRNRRFGGLKNE 227
>gi|320169531|gb|EFW46430.1| dehydrodolichyl diphosphate synthase [Capsaspora owczarzaki ATCC
30864]
Length = 467
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 74/230 (32%), Positives = 117/230 (50%), Gaps = 5/230 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P H+ IMDGN R+A + GH G + + + E+G++ +T++AFS
Sbjct: 158 LQHGPIPRHVAFIMDGNRRFAKKIHVNTAMGHALGFDKLEQTLDWCLELGVRIVTVYAFS 217
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R E++ L+ L K + ++K+ + +RV+G+ L D+ + A
Sbjct: 218 IENFKRSSQEVTALMDLAKVKFARLIEESEVIQKHGVSIRVLGDVTMLPLDVQQAIARAV 277
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+R N+ L I F Y+SR E+ A K I + G + D+ L + + T+D
Sbjct: 278 TLSRNNSKSILNICFPYTSRHEMVEATKQIATGLSEGRLQESDITEDLFERCMYTADA-- 335
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
PDL +RT GE RLSDF+LWQ A+S F WP+FS F A+ Y
Sbjct: 336 PDLFVRTSGEVRLSDFMLWQSAFSHMYFAEVLWPEFSLWDLFVAVLHYQR 385
>gi|312138738|ref|YP_004006074.1| undecaprenyl diphosphate synthase [Rhodococcus equi 103S]
gi|311888077|emb|CBH47389.1| undecaprenyl diphosphate synthase [Rhodococcus equi 103S]
Length = 255
Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats.
Identities = 88/232 (37%), Positives = 125/232 (53%), Gaps = 7/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGL-PRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ ++ DGN RWA G GHR G E++ GI+ TI+ S N R
Sbjct: 25 PRHVAVMCDGNRRWARENGFTDVSHGHRMGARKIAELLRWCDAAGIEMATIYLLSTENLR 84
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ L+++I +++ S N V+++G L +D L+EA D TR TG
Sbjct: 85 REPEELDTLLEIITEVVEE--ISGPGKNWSVKIVGTLDLLPEDQARRLREAADGTRGRTG 142
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDVPDPDLI 185
++ +A Y R EI+ A++++ +D + + D+ ++ I +L TS PDPDL+
Sbjct: 143 THVNVAVGYGGRQEIADAVQSLLRDKLAAGLTGDDLVKAMSVEGIDGHLYTSGQPDPDLV 202
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRT GE+RLS FLLWQ AYSE F YWP+F R F AL Y R RRFG
Sbjct: 203 IRTSGEQRLSGFLLWQSAYSEIWFTEAYWPEFRRVDFLRALRDYAARHRRFG 254
>gi|312380210|gb|EFR26273.1| hypothetical protein AND_07782 [Anopheles darlingi]
Length = 331
Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats.
Identities = 83/237 (35%), Positives = 125/237 (52%), Gaps = 3/237 (1%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + + P H+ IMDGN R+A + + GH G E +E + EVGI +T++
Sbjct: 37 IRVLRAGPIPAHVAFIMDGNRRYAKKANIAKAEGHSAGFEKLSETLQWCLEVGISEVTVY 96
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKK---GFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
AFSI N++R E+ L+ L + ++ L + I +R+IGN L DDI +
Sbjct: 97 AFSIENFKRTQDEVDGLMDLAREKFQRLLAERDKLHERGICIRIIGNWDLLADDIQRSIA 156
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
EA T+ N L +AF Y+SRDE++ +I+ + Q I G + DV+ L+ + L T
Sbjct: 157 EAVLLTKHNRKATLNVAFAYTSRDEMTHSIRTVAQGISDGRLEPGDVNEELLTRCLYTKY 216
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
+PDL++RT GE RLSDFLLWQ + F WP+F+ F A+ Y R
Sbjct: 217 SAEPDLLVRTSGEVRLSDFLLWQSTSTVMYFTETLWPEFTIWHLFGAVFYYQRYRWR 273
>gi|258592818|emb|CBE69127.1| Undecaprenyl pyrophosphate synthetase 2 (UPP synthetase 2)
(Di-trans,poly-cis-decaprenylcistransferase 2)
(Undecaprenyl diphosphate synthase 2) (UDS 2) [NC10
bacterium 'Dutch sediment']
Length = 258
Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats.
Identities = 89/244 (36%), Positives = 128/244 (52%), Gaps = 7/244 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ + P HIG+I+DGN R+A RG GHR+G E E++ E+ I+ +T
Sbjct: 14 LFQEVRGGELPRHIGLILDGNRRYARERGYSTLLEGHRRGAEKLEEVLNWCEELAIRMVT 73
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVL 117
++ FS N R E++ L+ LI+ + + + +++R IG L + +
Sbjct: 74 VWIFSTENVSRSQEEVNGLLALIEKKMHDIARDPKVHRKRMRIRAIGKMELLPQSTVKAI 133
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLI----AKY 173
+EAED TR L +A Y R EI+ AI + +D + V + + KY
Sbjct: 134 QEAEDATRDYDAFCLNVAVGYGGRQEIADAIATMLRDKTARMVPLEQIIDEISIDEIGKY 193
Query: 174 LDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
L T D+PDPDLIIRT GE RLS FLLWQ AYSE+ F YWP F + F A+ + R+
Sbjct: 194 LYTYDLPDPDLIIRTSGEVRLSGFLLWQSAYSEYYFCDAYWPVFRKIDFLRAIRSFQQRE 253
Query: 234 RRFG 237
RRFG
Sbjct: 254 RRFG 257
>gi|224104283|ref|XP_002313383.1| predicted protein [Populus trichocarpa]
gi|222849791|gb|EEE87338.1| predicted protein [Populus trichocarpa]
Length = 234
Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats.
Identities = 85/220 (38%), Positives = 134/220 (60%), Gaps = 3/220 (1%)
Query: 10 PPDHIGIIMDGNGRWAAARG-LPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ +IMDGN RWA RG + AGH G E+V + G++ LT+FAFS +NW
Sbjct: 1 MPRHVAVIMDGNARWARQRGFIALSAGHEAGARSLRELVELCCDWGVRVLTVFAFSYDNW 60
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+ L+ L + LK + + +V IG+ L + + ++ + E++T+ N+
Sbjct: 61 IRPKVEVDFLMSLFERMLKSELDNFVRQGARVSTIGDSSRLSESLKKLISDVEEKTKDNS 120
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT--SDVPDPDLII 186
L+L +A +YS + ++++A K+I Q ++ G+V D+D SL+ + L+T ++ P PDL+I
Sbjct: 121 RLHLIVAVSYSGKYDVTQACKSIAQKVKDGTVQLEDIDESLLEQELETNCAEYPCPDLLI 180
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHAL 226
RT GE R+S+FLLWQ+AY+E F WPDF + F AL
Sbjct: 181 RTSGELRISNFLLWQLAYTELFFAEALWPDFGKAEFVEAL 220
>gi|313772410|gb|EFS38376.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL074PA1]
gi|313792240|gb|EFS40341.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL110PA1]
gi|313801811|gb|EFS43045.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL110PA2]
gi|313807420|gb|EFS45907.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL087PA2]
gi|313809928|gb|EFS47649.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL083PA1]
gi|313813034|gb|EFS50748.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL025PA1]
gi|313818466|gb|EFS56180.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL046PA2]
gi|313820229|gb|EFS57943.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL036PA1]
gi|313822962|gb|EFS60676.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL036PA2]
gi|313825110|gb|EFS62824.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL063PA1]
gi|313830259|gb|EFS67973.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL007PA1]
gi|313834060|gb|EFS71774.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL056PA1]
gi|313838637|gb|EFS76351.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL086PA1]
gi|314925457|gb|EFS89288.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL036PA3]
gi|314960097|gb|EFT04199.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL002PA2]
gi|314962899|gb|EFT06999.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL082PA1]
gi|314973265|gb|EFT17361.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL053PA1]
gi|314975940|gb|EFT20035.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL045PA1]
gi|314978303|gb|EFT22397.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL072PA2]
gi|314984042|gb|EFT28134.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL005PA1]
gi|314987805|gb|EFT31896.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL005PA2]
gi|314990026|gb|EFT34117.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL005PA3]
gi|315078114|gb|EFT50165.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL053PA2]
gi|315080743|gb|EFT52719.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL078PA1]
gi|315085753|gb|EFT57729.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL002PA3]
gi|315088829|gb|EFT60805.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL072PA1]
gi|315096177|gb|EFT68153.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL038PA1]
gi|327326094|gb|EGE67884.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL096PA2]
gi|327330801|gb|EGE72547.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL097PA1]
gi|327332035|gb|EGE73772.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL096PA3]
gi|327443238|gb|EGE89892.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL013PA2]
gi|327446024|gb|EGE92678.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL043PA2]
gi|327447998|gb|EGE94652.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL043PA1]
gi|327453045|gb|EGE99699.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL092PA1]
gi|328753565|gb|EGF67181.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL020PA1]
gi|328760405|gb|EGF73973.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL099PA1]
Length = 231
Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats.
Identities = 84/221 (38%), Positives = 120/221 (54%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA RGL R GH +G + +++ A E+GI L+ +AFS NW+R E+
Sbjct: 1 MDGNGRWARQRGLRRTEGHARGEDALFDVIEGAIEMGIPYLSAYAFSTENWKRSPDEVRW 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ + + + L +++R G R L ++ L+ AE Q+ NT L L N
Sbjct: 61 LMGFNRDVIHRRRDQLDAMGVRIRWAGRRPKLWKSVIKELESAEKQSTDNTVLTLQFCVN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R EI A+++I + G + + +LD +VPD DL R+ GE+R S+F
Sbjct: 121 YGGRAEIVDAVRDIARLAAEGKIDPDHITEKTFRTHLDEPEVPDVDLFWRSSGEQRTSNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
LLWQ AY+E VF WPD R + A+ +Y RDRRFGG
Sbjct: 181 LLWQSAYAEMVFSDVLWPDVDRRDLWAAVVEYAKRDRRFGG 221
>gi|313764552|gb|EFS35916.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL013PA1]
gi|313816093|gb|EFS53807.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL059PA1]
gi|313827679|gb|EFS65393.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL063PA2]
gi|314915548|gb|EFS79379.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL005PA4]
gi|314918499|gb|EFS82330.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL050PA1]
gi|314919985|gb|EFS83816.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL050PA3]
gi|314931998|gb|EFS95829.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL067PA1]
gi|314955867|gb|EFT00267.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL027PA1]
gi|314958348|gb|EFT02451.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL002PA1]
gi|314968024|gb|EFT12123.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL037PA1]
gi|315098439|gb|EFT70415.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL059PA2]
gi|315101204|gb|EFT73180.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL046PA1]
gi|315108425|gb|EFT80401.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL030PA2]
gi|327450878|gb|EGE97532.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL087PA3]
gi|327453773|gb|EGF00428.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL083PA2]
gi|328754298|gb|EGF67914.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL087PA1]
gi|328754450|gb|EGF68066.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
HL025PA2]
Length = 231
Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats.
Identities = 84/221 (38%), Positives = 120/221 (54%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA RGL R GH +G + +++ A E+GI L+ +AFS NW+R E+
Sbjct: 1 MDGNGRWARQRGLRRTEGHARGEDALFDVIEGAIEMGIPYLSAYAFSTENWKRSPDEVRW 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ + + + L +++R G R L ++ L+ AE Q+ NT L L N
Sbjct: 61 LMGFNRDVIHRRRDQLDAMGVRIRWAGRRPKLWKSVIKELESAEKQSTDNTVLTLQFCVN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R EI A+++I + G + + +LD +VPD DL R+ GE+R S+F
Sbjct: 121 YGGRAEIVDAVRDIARLAAEGKIDPDHITEKTFRTHLDEPEVPDVDLFWRSSGEQRTSNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
LLWQ AY+E VF WPD R + A+ +Y RDRRFGG
Sbjct: 181 LLWQSAYAEMVFSDVLWPDVDRRDLWAAVVEYAKRDRRFGG 221
>gi|325676569|ref|ZP_08156247.1| undecaprenyl diphosphate synthase [Rhodococcus equi ATCC 33707]
gi|325552747|gb|EGD22431.1| undecaprenyl diphosphate synthase [Rhodococcus equi ATCC 33707]
Length = 255
Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats.
Identities = 87/232 (37%), Positives = 125/232 (53%), Gaps = 7/232 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGL-PRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ ++ DGN RWA G GHR G E++ GI+ TI+ S N R
Sbjct: 25 PRHVAVMCDGNRRWARENGFTDVSHGHRMGARKIAELLRWCDAAGIEMATIYLLSTENLR 84
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ L+++I +++ S N V+++G L +D L+EA + TR TG
Sbjct: 85 REPEELDTLLEIITEVVEE--ISGPGKNWSVKIVGTLDLLPEDQARRLREAAEGTRGRTG 142
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDVPDPDLI 185
++ +A Y R EI+ A++++ +D + + D+ ++ I +L TS PDPDL+
Sbjct: 143 THVNVAVGYGGRQEIADAVQSLLRDKLAAGLTGDDLVKAMSVEGIDGHLYTSGQPDPDLV 202
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRT GE+RLS FLLWQ AYSE F YWP+F R F AL Y R RRFG
Sbjct: 203 IRTSGEQRLSGFLLWQSAYSEIWFTEAYWPEFRRVDFLRALRDYAARHRRFG 254
>gi|319950189|ref|ZP_08024116.1| putative undecaprenyl pyrophosphate synthetase [Dietzia cinnamea
P4]
gi|319436093|gb|EFV91286.1| putative undecaprenyl pyrophosphate synthetase [Dietzia cinnamea
P4]
Length = 295
Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats.
Identities = 85/242 (35%), Positives = 126/242 (52%), Gaps = 7/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLT 59
+ +S+ P H+ ++ DGN RWA G A GHR G E++ E+GI T
Sbjct: 55 LRSSLEGKRLPRHVAVMCDGNRRWAKEAGFTDVAHGHRAGAVKIAEMLGWCDELGIDVAT 114
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
I+ S N R E+ EL+++I + + + + N +VR++G L + + L+
Sbjct: 115 IYLLSTENLGRDADELGELLQIIADVVDE--ITRPERNWEVRIVGRLELLPEWLADRLRH 172
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLD 175
AE + G+ + +A Y R EI+ A + + + + D + I ++L
Sbjct: 173 AEQVSTGRPGVKVNVAVGYGGRQEIADAARELVEQLIDEGRTGADLVDGITVEGIGEHLY 232
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
TS PDPDL+IRT GE+RLS FLLWQ AYSE F YWP F R F AL +Y+ R+RR
Sbjct: 233 TSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEIWFTEAYWPAFRRVDFLRALREYSARNRR 292
Query: 236 FG 237
FG
Sbjct: 293 FG 294
>gi|224373190|ref|YP_002607562.1| undecaprenyl diphosphate synthase [Nautilia profundicola AmH]
gi|223588901|gb|ACM92637.1| undecaprenyl diphosphate synthase [Nautilia profundicola AmH]
Length = 220
Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats.
Identities = 91/228 (39%), Positives = 134/228 (58%), Gaps = 10/228 (4%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVG-IKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA RGL R GH+KG E +I A+ I LT++AFS NW+RP
Sbjct: 2 HLAIIMDGNGRWAKKRGLKRIEGHKKGAETVRKITEYCAKNEEISVLTLYAFSTENWKRP 61
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E+ L+KL++ +L+K + KN+IK IG+ + + ++ +++T+ N L
Sbjct: 62 KMEVEFLMKLLEGYLEKELETYIKNDIKFETIGDISKFSEKLKKRIQLTKEKTKNNKKLT 121
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+A NY S++EI+RA+K + + + ++ I LD D DL+IRT GE
Sbjct: 122 QVLALNYGSKNEITRAVKKLIEK-------NEEITEENIQNNLDLP--RDVDLLIRTSGE 172
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLS+FLLWQ AY+E F WPDF+ E + ++LR+RRFGG+
Sbjct: 173 IRLSNFLLWQCAYAEMFFTNTLWPDFTPEELDKIIKSFHLRERRFGGV 220
>gi|254797263|ref|YP_003082105.1| undecaprenyl diphosphate synthase [Neorickettsia risticii str.
Illinois]
gi|254590503|gb|ACT69865.1| undecaprenyl diphosphate synthase [Neorickettsia risticii str.
Illinois]
Length = 230
Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats.
Identities = 97/234 (41%), Positives = 128/234 (54%), Gaps = 4/234 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M+ P HI IIMDGN RWA ARGL G++ G+E V A+ GI LT+F FS
Sbjct: 1 MIGKELPVHIAIIMDGNARWARARGLCNSDGYKMGVEAAFSAVRASCNAGIPYLTLFLFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW R ++ + + + L NIKV+VIG RL L V+K E T
Sbjct: 61 TENWSRNPDDVRLVFSIFEKASVTALNELCDANIKVKVIGERLGLGKSARQVIKNLESGT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N+G+ L +A NY R EI A+ + D + + +VD +A YL T +PDPDL
Sbjct: 121 AKNSGMYLCLAINYGGRSEIINAVSRMIND----GLRAEEVDVQKLASYLYTDGIPDPDL 176
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
IIRT GEKRLS+FLLWQ +YSE F WPDF+ + A+ Y +R R++G
Sbjct: 177 IIRTAGEKRLSNFLLWQSSYSELYFCDTLWPDFTEKDLEMAMEAYKVRCRKYGK 230
>gi|311898139|dbj|BAJ30547.1| putative undecaprenyl diphosphate synthase [Kitasatospora setae
KM-6054]
Length = 264
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 88/235 (37%), Positives = 127/235 (54%), Gaps = 7/235 (2%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
++ P HIG+I+DGN RWA A G GH++G + +E + AE ++ +T++ S +N
Sbjct: 33 ANTPHHIGVILDGNRRWAKATGGTTAYGHQRGADKISEFLGWCAETDVQVVTLWMLSTDN 92
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
RP E+ L+ +I+ ++ S KV +G L VLK A +T
Sbjct: 93 LARPADELVPLLGIIEDTVRGLADS---GRWKVHPVGALDLLPAKTAGVLKTAAQETEHV 149
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLDTSDVPDPD 183
GL + +A Y R EI+ A++++ Q+ ++ D IA++L T PDPD
Sbjct: 150 DGLTVNVAIGYGGRQEIADAVRSLLQEHAGRGTSIEELAEILDVEHIAEHLYTKGQPDPD 209
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L+IRT GE+RLS FLLWQ A+SEF F YWP F R F AL Y LR+RR G
Sbjct: 210 LVIRTSGEQRLSGFLLWQSAHSEFYFCEAYWPAFRRVDFLRALRDYQLRNRRMGR 264
>gi|291059974|gb|ADD72709.1| di-trans,poly-cis-decaprenylcistransferase [Treponema pallidum
subsp. pallidum str. Chicago]
Length = 231
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 91/229 (39%), Positives = 131/229 (57%), Gaps = 2/229 (0%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA RGL R AGHR+G++ EIVAA + + +T++ FS NW+R
Sbjct: 5 QHVAIIMDGNGRWAERRGLRRSAGHRRGLQTAREIVAALCAIRVPFVTLYVFSTENWKRS 64
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E+ L+ LI+ +LKK ++ I+V +G +L D+ ++ ++TR + G
Sbjct: 65 AHEVHFLMNLIRWYLKKEMSFYVEHAIRVVHLGCAQTLPPDVRSQIEYVVERTRSHRGTT 124
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+ +A NY +DEI RA+K + + LD +P D +IRTGG+
Sbjct: 125 VALAINYGGKDEILRAVKKVLCSTSC--PDGELLTEEAFGACLDAPQLPSVDFLIRTGGQ 182
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
+R+S+FLLWQ AY+EF F WPDF E AL++Y LR R FGGL
Sbjct: 183 QRMSNFLLWQSAYAEFYFTDILWPDFRVEDMLRALDEYRLRTRTFGGLE 231
>gi|91199672|emb|CAI78027.1| putative undecaprenyl pyrophosphate synthetase [Streptomyces
ambofaciens ATCC 23877]
gi|96771719|emb|CAI78301.1| putative undecaprenyl pyrophosphate synthetase [Streptomyces
ambofaciens ATCC 23877]
gi|114049941|emb|CAK50958.1| putative undecaprenyl pyrophosphate synthetase [Streptomyces
ambofaciens]
gi|114050163|emb|CAK51196.1| putative undecaprenyl pyrophosphate synthetase [Streptomyces
ambofaciens]
gi|117164264|emb|CAJ87806.1| putative undecaprenyl pyrophosphate synthetase [Streptomyces
ambofaciens ATCC 23877]
gi|126347376|emb|CAJ89084.1| putative undecaprenyl pyrophosphate synthetase [Streptomyces
ambofaciens ATCC 23877]
Length = 239
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 86/234 (36%), Positives = 130/234 (55%), Gaps = 5/234 (2%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ +MDGNGRWA R LPR GHR + + AA G++ L+++AFS NW
Sbjct: 3 GVPRHVACVMDGNGRWAQRRSLPRTDGHRAAETTVIDTIEAARAAGVEWLSLYAFSTENW 62
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS-LDDDILCVLKEAEDQTRLN 127
RP E++ L++L++ ++K L I+ R +G + ++ ++ T N
Sbjct: 63 NRPGPEVAFLMRLVRRVVRKHAPLLLARGIRCRFLGAADPRIPRELARDFEDLTTLTAGN 122
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
G+ L +AF++ R +I A +++ G + +V L A +L D PD DL+IR
Sbjct: 123 RGMTLTVAFDHGGRRDIVEAARSLI----RGGTAAEEVTEQLFADHLPFPDTPDVDLVIR 178
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
T GE+R+S+F+LWQVAY+E+VF WPDF F L+ Y RDRRFGG+
Sbjct: 179 TSGEQRISNFMLWQVAYAEWVFPEVLWPDFRASDFLACLHTYRCRDRRFGGVPA 232
>gi|319956630|ref|YP_004167893.1| undecaprenyl pyrophosphate synthetase [Nitratifractor salsuginis
DSM 16511]
gi|319419034|gb|ADV46144.1| Undecaprenyl pyrophosphate synthetase [Nitratifractor salsuginis
DSM 16511]
Length = 226
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 87/229 (37%), Positives = 129/229 (56%), Gaps = 9/229 (3%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAA-EVGIKNLTIFAFSINNWRR 70
H+ IIMDGNGRWAA RGL R GH G+E + A E I+ LT++AFS NW+R
Sbjct: 6 RHLAIIMDGNGRWAAERGLRRTKGHEAGVETVRRVTEYCAKEPEIETLTLYAFSTENWKR 65
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+ L++ ++++ ++ I+ IG+ + L+ + TR N L
Sbjct: 66 PKMEVDYLMHLLEKYIRQEQEHYMEHGIRFETIGDLSPFGSKLRQTLEATRELTRNNRRL 125
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY RDEI R+++ + I+++LDT D DL+IRT G
Sbjct: 126 TQILALNYGGRDEIVRSVRRCL-------AAGEEPSEENISRHLDTP-YTDVDLLIRTSG 177
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+RLS+FLLWQ++Y+E F P YWPDFS E ++ + R+R+FGG+
Sbjct: 178 EQRLSNFLLWQLSYTELAFTPTYWPDFSVEELQSIIDDFKNRNRKFGGI 226
>gi|307721205|ref|YP_003892345.1| Undecaprenyl pyrophosphate synthetase [Sulfurimonas autotrophica
DSM 16294]
gi|306979298|gb|ADN09333.1| Undecaprenyl pyrophosphate synthetase [Sulfurimonas autotrophica
DSM 16294]
Length = 225
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 88/230 (38%), Positives = 130/230 (56%), Gaps = 10/230 (4%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAA-AEVGIKNLTIFAFSINNWRR 70
HI IIMDGNGRWA +G R GH G +V EI + I+ LT++AFS NW+R
Sbjct: 5 KHIAIIMDGNGRWAELQGKKRVKGHEAGAKVVKEITTYCSNDEDIERLTLYAFSTENWKR 64
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL++ +LK S +NN+K IG+ + + ++ E++T GL
Sbjct: 65 PRLEVEFLMKLLEKYLKDELLSYLQNNVKFEAIGDIRAFSKSLQKTIQMVEEKTAHCDGL 124
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY S+DEI RA+ ++ + ++ ++ LD D DL+IRTGG
Sbjct: 125 VQSLALNYGSQDEILRAVNSLKKHD-------ENITVEMLNNALDCKQ--DVDLLIRTGG 175
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
+KRLS+FLLWQ AY+E F WPDF+ + ++++ +RRFGGL
Sbjct: 176 DKRLSNFLLWQSAYAELFFTDTLWPDFTCKELEKIIHKFTKVERRFGGLK 225
>gi|256833106|ref|YP_003161833.1| undecaprenyl diphosphate synthase [Jonesia denitrificans DSM 20603]
gi|256686637|gb|ACV09530.1| undecaprenyl diphosphate synthase [Jonesia denitrificans DSM 20603]
Length = 259
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 83/242 (34%), Positives = 135/242 (55%), Gaps = 7/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + P H+G+I+DGN RWA + G P GHR+G + + + + E+G++ +T+
Sbjct: 21 IARRLPPQTIPRHVGVILDGNRRWAKSFGEPAATGHRRGADKIADFLTWSEELGVEVVTL 80
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N RP E+ L+ +I +++ + ++RV+G L DD+ L+
Sbjct: 81 WMLSTDNLHRPAEELHALLSIISDAVREL---ANEGRWRLRVVGKLDLLPDDLARDLRRY 137
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDT 176
E+ TR GL++ +A Y R EI+ A+K++ + + D S + IA +L T
Sbjct: 138 EESTRHIDGLHVNVAIGYGGRHEIADAVKSLLHTYDEQGLSLADAMSRMCVDDIANHLYT 197
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
PDP+L+IRT GE+RL FLLWQ A+SEF F +WPDF R + AL ++ R+RR
Sbjct: 198 KGQPDPELVIRTSGEQRLGGFLLWQSAHSEFYFCEAFWPDFRRVDYLRALRAFSTRERRL 257
Query: 237 GG 238
G
Sbjct: 258 GR 259
>gi|254458061|ref|ZP_05071488.1| undecaprenyl pyrophosphate synthetase 1 [Campylobacterales
bacterium GD 1]
gi|207085454|gb|EDZ62739.1| undecaprenyl pyrophosphate synthetase 1 [Campylobacterales
bacterium GD 1]
Length = 225
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 89/230 (38%), Positives = 124/230 (53%), Gaps = 10/230 (4%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVG-IKNLTIFAFSINNWRR 70
HI IIMDGNGRWA G R GH G V EI + I+ LT++AFS NW+R
Sbjct: 5 KHIAIIMDGNGRWAELSGKKRVKGHEAGARVVKEITTYCSNNKEIERLTLYAFSTENWKR 64
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL++++LK NN++ IG+ + + +K+ +D+T GL
Sbjct: 65 PRLEVEFLMKLLENYLKNELPVYLDNNVRFEPIGDIRAFSKSLQKTIKDVKDKTAHCDGL 124
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY S+DE+ RAI I D+ ++ LD D DL+IRTGG
Sbjct: 125 VQSLALNYGSQDEMLRAINKI-------KNYEDDITQEMLGNALDCKH--DVDLLIRTGG 175
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
+ RLS+FLLWQ AY+E F+ WPDF+ + + Y +RRFGGL
Sbjct: 176 DHRLSNFLLWQAAYAELFFVDTLWPDFTTDDLEKIIKSYKKIERRFGGLK 225
>gi|260906823|ref|ZP_05915145.1| short-chain Z-isoprenyl diphosphate synthase [Brevibacterium linens
BL2]
Length = 253
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 83/243 (34%), Positives = 125/243 (51%), Gaps = 10/243 (4%)
Query: 1 MVASMMSS-SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
++ + S P H+G+I DGN RWA G GHR G E E + E+ + +T
Sbjct: 16 LLRELDKSVPVPRHVGVITDGNRRWAKEFGATTADGHRAGAEKIVEFLGWCDEIDVDIVT 75
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++ S N R E+ L+++I ++K N ++V+++G+ L + L+
Sbjct: 76 LYVLSKENLARSAEEVEVLIEIISDLVEKIAAL---NGVRVQLVGDLEILPPGLRARLEA 132
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLD 175
A + + + + +A Y R EI A+K++ + + S L I+++L
Sbjct: 133 A--TSEGDCQMRVNVAVGYGGRQEIVNAVKSLLRLRTDEGTDLETIISELSPQQISEHLY 190
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
T PDPDLIIR+ GE+RLS FL+WQ AYSEF F YWPDF R F A+ Y LR RR
Sbjct: 191 TKGQPDPDLIIRSSGEQRLSGFLMWQSAYSEFYFCEAYWPDFRRTDFLRAVRDYGLRQRR 250
Query: 236 FGG 238
FG
Sbjct: 251 FGK 253
>gi|298346621|ref|YP_003719308.1| undecaprenyl phosphate synthetase [Mobiluncus curtisii ATCC 43063]
gi|298236682|gb|ADI67814.1| undecaprenyl phosphate synthetase [Mobiluncus curtisii ATCC 43063]
Length = 227
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 91/221 (41%), Positives = 127/221 (57%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA A+GL R AGH G + +A A E G+K L+++AFS NW+R +E+
Sbjct: 1 MDGNGRWANAQGLNRTAGHEAGEYALMDTIAGAVEAGVKFLSVYAFSTENWKRSPAEVKF 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ + L+ L ++VR G L +L L+ AE TR NTG L + N
Sbjct: 61 LMGYSRRVLRDRRDELNAWGVRVRWSGREGRLWKSVLTELRRAETLTRGNTGTQLIMCLN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R E++ A + + Q + +G++ + + A+ L DVPD DL+IRT GE+R S+F
Sbjct: 121 YGGRAELADAARKLAQRVAAGTLNPERITEATFARELYLPDVPDVDLLIRTSGEQRTSNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L WQ AY+E VF PE WP++ R + L Y RDRRFGG
Sbjct: 181 LPWQAAYAELVFAPEPWPEYGRAALWRDLLAYQHRDRRFGG 221
>gi|284044966|ref|YP_003395306.1| undecaprenyl diphosphate synthase [Conexibacter woesei DSM 14684]
gi|283949187|gb|ADB51931.1| undecaprenyl diphosphate synthase [Conexibacter woesei DSM 14684]
Length = 230
Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 92/228 (40%), Positives = 126/228 (55%), Gaps = 12/228 (5%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ II DGNGRWAA RGL GHR G E + A E+GI+ L I+AFS NW R
Sbjct: 11 RHVAIITDGNGRWAAQRGLDVTEGHRAGAENVKARLRDAVELGIEQLAIYAFSTENWVRS 70
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNR-LSLDDDILCVLKEAEDQTRLNTGL 130
E++ L++L + ++ + L + +++R IG R + DI+ ++ AE T NT +
Sbjct: 71 PDEVAGLMELFREYIARETPELHEEGVRMRFIGRRSDPVPPDIVEQMEWAEQLTADNTQI 130
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
FI FNY R EI A ++ +L D+ DP+L+IRT G
Sbjct: 131 TFFIPFNYGGRAEIVDAARSF-----------TGTTEEEFRAHLYAPDLHDPELVIRTSG 179
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E+RLS++L+WQ AYSE VF E WPDF R F L Q+ R+RRFGG
Sbjct: 180 EQRLSNYLVWQTAYSELVFRDELWPDFDRAAFEQTLEQFAARERRFGG 227
>gi|297825229|ref|XP_002880497.1| hypothetical protein ARALYDRAFT_481210 [Arabidopsis lyrata subsp.
lyrata]
gi|297326336|gb|EFH56756.1| hypothetical protein ARALYDRAFT_481210 [Arabidopsis lyrata subsp.
lyrata]
Length = 233
Score = 246 bits (627), Expect = 3e-63, Method: Composition-based stats.
Identities = 96/230 (41%), Positives = 131/230 (56%), Gaps = 2/230 (0%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ I+DGN RWA GL GH G + F EI E+GI ++ FAFS NW
Sbjct: 1 MPRHVAFILDGNRRWAKRDGLLTSQGHEAGAKRFIEIAELCFELGIHTVSAFAFSTGNWG 60
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ L+ L + LK + I+V VIGN+ +D+ IL + E E+ T+
Sbjct: 61 RDKDEVKWLMSLFQHQLKSNSQYFHRKEIRVSVIGNQTKIDESILQEIHEIEEATKGYKN 120
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT--SDVPDPDLIIR 187
+L +A +YS R +I A K++ + E G + DVD +LI + L T SD P PDL+IR
Sbjct: 121 KHLIVAIDYSGRFDIMHACKSLVKKSERGLIREQDVDEALIERELLTNCSDFPSPDLMIR 180
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
T GE+R+SDF LWQ+AY+E F P WPDF ++ AL Y R+RRFG
Sbjct: 181 TSGEQRISDFFLWQLAYTELFFSPVLWPDFDKDKLLEALASYQRRERRFG 230
>gi|119715296|ref|YP_922261.1| undecaprenyl pyrophosphate synthetase [Nocardioides sp. JS614]
gi|119535957|gb|ABL80574.1| Undecaprenyl pyrophosphate synthetase [Nocardioides sp. JS614]
Length = 258
Score = 246 bits (627), Expect = 3e-63, Method: Composition-based stats.
Identities = 88/242 (36%), Positives = 129/242 (53%), Gaps = 7/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M+ M S + P HIG+++DGN RWA A G GH+ G ++ EVG + +T+
Sbjct: 20 MLRRMPSENLPKHIGVMLDGNRRWARAVGRDTADGHQAGAANIEPLLGWCDEVGTEVVTL 79
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N RP E++ L+++I + + +V +G L + LK A
Sbjct: 80 WLLSTDNLNRPERELAPLLEIIADAVDSLAD---QRRWRVHPVGALDLLPASVAERLKAA 136
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDT 176
E+ TR G+ + +A Y R EI+ A++++ Q+ + +D IA++L T
Sbjct: 137 EEATRDVDGMLVNVAVGYGGRREIADAVRSLLQEAAVNGTSLEELASAIDVESIAEHLYT 196
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
PDPDL+IRT GE+RL FLLWQ A SEF F YWPDF R F AL Y LR+RR+
Sbjct: 197 KGQPDPDLVIRTSGEQRLGGFLLWQSAKSEFYFCEAYWPDFRRVDFLRALRAYTLRERRY 256
Query: 237 GG 238
G
Sbjct: 257 GA 258
>gi|327285394|ref|XP_003227419.1| PREDICTED: dehydrodolichyl diphosphate synthase-like [Anolis
carolinensis]
Length = 333
Score = 246 bits (627), Expect = 3e-63, Method: Composition-based stats.
Identities = 81/229 (35%), Positives = 129/229 (56%), Gaps = 3/229 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IMDGN R+A + + GH +G + + +G++ +T++AFS
Sbjct: 20 IKAGPMPKHIAFIMDGNRRYAQKHKVKKLEGHSQGFAKLAQTLQWCLSLGVREVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++RP E+ L++L + + L+K+ + VR++G+ L DI ++ +
Sbjct: 80 IENFKRPREEVDGLMQLAREKFTRLLEEQENLEKHGVCVRILGDLPLLPRDIQELIAKVV 139
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T+ L IAF Y+SR+EIS A+K + +E G + DV SLI K L +S P
Sbjct: 140 LATKQYNTCFLNIAFAYTSREEISNAVKELAWGVEEGLLQPSDVSESLIDKCLYSSKSPH 199
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
PD++IRT GE RLSDF+LWQ ++S VF P WP++S + A+ Q+
Sbjct: 200 PDILIRTSGEVRLSDFMLWQTSHSCLVFQPVLWPEYSFWNLWEAILQFQ 248
>gi|223040142|ref|ZP_03610422.1| undecaprenyl pyrophosphate synthetase (UPP
synthetase)(Di-trans,poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphatesynthase) (UDS) [Campylobacter
rectus RM3267]
gi|222878619|gb|EEF13720.1| undecaprenyl pyrophosphate synthetase (UPP
synthetase)(Di-trans,poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphatesynthase) (UDS) [Campylobacter
rectus RM3267]
Length = 233
Score = 246 bits (627), Expect = 3e-63, Method: Composition-based stats.
Identities = 90/231 (38%), Positives = 134/231 (58%), Gaps = 5/231 (2%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+H+ IIMDGNGRWA +RGL R GH G V ++ + G+ L+++AFS NW+RP
Sbjct: 5 NHLAIIMDGNGRWAKSRGLLRTKGHETGANVVEQMCEFCIDEGVAVLSLYAFSTENWKRP 64
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE++ L++L+ FL S KN IK VIG+ L D + + + ++ T N+ L
Sbjct: 65 KSEVAFLMELLHKFLLSKRESFIKNGIKFNVIGDESPLSDKLKNEITDIKNATAQNSRLK 124
Query: 132 LFIAFNYSSRDEISRAIKNIFQDI---ESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
L +A NY ++DEI RA + + + ++ + LD + DL++RT
Sbjct: 125 LNLALNYGAKDEILRAFRRFCKKNGGEFDTQNLALNLSEDSLQGCLD--EPAPIDLLVRT 182
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GGE+RLS+F+LWQ +Y+EF F P WPDF+RE ++ +DRRFGGL
Sbjct: 183 GGEQRLSNFMLWQASYAEFAFTPTLWPDFTREELARITAKFKKKDRRFGGL 233
>gi|159119300|ref|XP_001709868.1| Undecaprenyl pyrophosphate synthase [Giardia lamblia ATCC 50803]
gi|157437986|gb|EDO82194.1| Undecaprenyl pyrophosphate synthase [Giardia lamblia ATCC 50803]
Length = 265
Score = 246 bits (627), Expect = 3e-63, Method: Composition-based stats.
Identities = 85/240 (35%), Positives = 134/240 (55%), Gaps = 9/240 (3%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ +IMDGNGRWA + R GH +G+ V IV GI+ LT++AFS NW
Sbjct: 2 IPMHVAVIMDGNGRWARKQLQERTFGHEQGVSVLESIVDECINCGIRFLTVYAFSTENWS 61
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNR-LSLDDDILCVLKEAEDQTRLNT 128
RP +E+S L +L+ + +++ + ++ N+KV+ G R + + ++ + E T T
Sbjct: 62 RPPTEVSFLFELLSAAIQRVRTTYRERNVKVQFCGERTTQIPETVIAAMNCIEQDTAACT 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSH-----DVDSSLIAKYLDT---SDVP 180
GL L + FNY EI++A +++ D G + + + +DT +++P
Sbjct: 122 GLILSVCFNYGGHTEIAQACRSVLADCLEGDAVENIKTRLQMPIEQFIQQIDTHLYANLP 181
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DL+IRTG EKRLS+FL W +AY+E +F WP+FS F L+++ R RRFGG+
Sbjct: 182 PVDLLIRTGCEKRLSNFLPWHLAYAEIIFSDLLWPEFSVRAFKDCLDEFASRTRRFGGVQ 241
>gi|15639591|ref|NP_219041.1| undecaprenyl pyrophosphate synthase [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189025829|ref|YP_001933601.1| undecaprenyl pyrophosphate synthase [Treponema pallidum subsp.
pallidum SS14]
gi|6136147|sp|O83612|UPPS_TREPA RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|3322897|gb|AAC65576.1| conserved hypothetical protein [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189018404|gb|ACD71022.1| hypothetical protein TPASS_0603 [Treponema pallidum subsp. pallidum
SS14]
Length = 228
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 91/229 (39%), Positives = 131/229 (57%), Gaps = 2/229 (0%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA RGL R AGHR+G++ EIVAA + + +T++ FS NW+R
Sbjct: 2 QHVAIIMDGNGRWAERRGLRRSAGHRRGLQTAREIVAALCAIRVPFVTLYVFSTENWKRS 61
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E+ L+ LI+ +LKK ++ I+V +G +L D+ ++ ++TR + G
Sbjct: 62 AHEVHFLMNLIRWYLKKEMSFYVEHAIRVVHLGCAQTLPPDVRSQIEYVVERTRSHRGTT 121
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+ +A NY +DEI RA+K + + LD +P D +IRTGG+
Sbjct: 122 VALAINYGGKDEILRAVKKVLCSTSC--PDGELLTEEAFGACLDAPQLPSVDFLIRTGGQ 179
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
+R+S+FLLWQ AY+EF F WPDF E AL++Y LR R FGGL
Sbjct: 180 QRMSNFLLWQSAYAEFYFTDILWPDFRVEDMLRALDEYRLRTRTFGGLE 228
>gi|226307742|ref|YP_002767702.1| short-chain Z-isoprenyl diphosphate synthase [Rhodococcus
erythropolis PR4]
gi|229493884|ref|ZP_04387656.1| di-trans,poly-cis-decaprenylcistransferase [Rhodococcus
erythropolis SK121]
gi|226186859|dbj|BAH34963.1| short-chain Z-isoprenyl diphosphate synthase [Rhodococcus
erythropolis PR4]
gi|229319161|gb|EEN85010.1| di-trans,poly-cis-decaprenylcistransferase [Rhodococcus
erythropolis SK121]
Length = 255
Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats.
Identities = 85/243 (34%), Positives = 124/243 (51%), Gaps = 7/243 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGL-PRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+++ + + P H+ ++ DGN RWA G GHR G E++ GI+ T
Sbjct: 15 LLSHLDGLAHPRHVAVMCDGNRRWARENGFTDVSHGHRMGALKIAELLEWCDAAGIEMAT 74
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
I+ S N RR E+ L+++I +++ S N V+++G L + L+E
Sbjct: 75 IYLLSTENLRREPEELDTLLEIITDVVEE--ISGPGKNWSVQIVGALDLLPPEQSRRLRE 132
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLD 175
A T TG ++ +A Y R EI+ A++++ +D + + V I +L
Sbjct: 133 AAAGTSGRTGTHVNVAIGYGGRQEIADAVQSLLRDKIGAGLSGDELIQAVTVDGIDGHLY 192
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
TS PDPDL+IRT GE+RLS FLLWQ AYSE F YWP+F R F AL Y R RR
Sbjct: 193 TSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEIWFTEAYWPEFRRVDFLRALRDYAARHRR 252
Query: 236 FGG 238
FG
Sbjct: 253 FGA 255
>gi|239917729|ref|YP_002957287.1| Undecaprenyl pyrophosphate synthetase [Micrococcus luteus NCTC
2665]
gi|281413777|ref|ZP_06245519.1| Undecaprenyl pyrophosphate synthetase [Micrococcus luteus NCTC
2665]
gi|239838936|gb|ACS30733.1| Undecaprenyl pyrophosphate synthetase [Micrococcus luteus NCTC
2665]
Length = 287
Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats.
Identities = 95/243 (39%), Positives = 140/243 (57%), Gaps = 8/243 (3%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P H+ I+MDGNGRWA RGLPR GHR G ++VA A E+GI +++ +AF
Sbjct: 21 RIDPRFVPRHVAIVMDGNGRWANQRGLPRTEGHRAGEAALLDVVAGAVELGIGHVSAYAF 80
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRR E+ L+ + L++ +L N+++R G L ++ L+EAE+
Sbjct: 81 STENWRRSAEEVRFLMGFSRDVLRRQRDTLHSWNVRIRWNGRAPRLWTPVIRELQEAEEL 140
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD-------- 175
TR NTG L + NY SR EI ++ I +++ +G + ++ +I +YLD
Sbjct: 141 TRHNTGTTLHMCVNYGSRAEILDGVQAIAEEVRAGRMRPGEISEDVITRYLDRGFRTGQD 200
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
VPD DL +RT GE+RLS++LLWQ AY+E +F+ WPD R + A+ Y RDRR
Sbjct: 201 VDVVPDVDLFLRTSGEQRLSNYLLWQSAYAELLFLDVLWPDVDRRTLWAAVETYARRDRR 260
Query: 236 FGG 238
+GG
Sbjct: 261 YGG 263
>gi|297559084|ref|YP_003678058.1| undecaprenyl diphosphate synthase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296843532|gb|ADH65552.1| undecaprenyl diphosphate synthase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 253
Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats.
Identities = 87/242 (35%), Positives = 124/242 (51%), Gaps = 9/242 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGL-PRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ + S P H+G+ MDGN RWA GL GH+ G E++ EVG++ +T
Sbjct: 15 LERRLTSQEIPRHVGVAMDGNRRWAKVSGLGAAEQGHQAGANKIFELLRWCDEVGVQVVT 74
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++ S +N R SE+ LV++I+ + + L++ R +G L LKE
Sbjct: 75 LWMLSTDNLSRDESELGPLVRIIEQTIAR----LREEGWNTRPVGALDILPASTAQALKE 130
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAI----KNIFQDIESGSVCSHDVDSSLIAKYLD 175
AE T N GL + +A Y R EI+ A+ + + +D IA++L
Sbjct: 131 AETATSGNPGLVVNVAVGYGGRREIADAVRSLLQAEAAKGTGIQELAERLDIEDIARHLY 190
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
T PDPDL+IRT GE+RLS F+LWQ +SEF F YWP F R F AL Y R+RR
Sbjct: 191 TRGQPDPDLLIRTSGEQRLSGFMLWQSVHSEFYFCEVYWPAFRRVDFLRALRSYGARNRR 250
Query: 236 FG 237
+G
Sbjct: 251 YG 252
>gi|188577167|ref|YP_001914096.1| undecaprenyl diphosphate synthase [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|188521619|gb|ACD59564.1| undecaprenyl diphosphate synthase [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 236
Score = 245 bits (625), Expect = 5e-63, Method: Composition-based stats.
Identities = 88/225 (39%), Positives = 127/225 (56%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA R PR GHR G N + E G+ LT+FAFS NW RP E+
Sbjct: 1 MDGNGRWAQRRRRPRVIGHRAGARAVNRTIDFCLEKGVSALTLFAFSSENWGRPQDEVDA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+KL L + L++ ++VR IG+R + + AE T N L L IA +
Sbjct: 61 LMKLFLHALDREVGELQRRGVQVRFIGDRSRFAAPLRDRMAGAERSTAANARLVLSIAAS 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I+ A + + +D+ +G + +D +L++ + +D+P PDL IRTGG+ R+S+F
Sbjct: 121 YGGRQDIATAARALAEDVAAGRLQPEQIDEALLSSRVALADLPAPDLFIRTGGDTRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
LLWQ+AY+E F WP+F + AL+ Y R+RRFG S +
Sbjct: 181 LLWQLAYTELWFTETLWPEFDAGVMQQALDDYAGRERRFGLTSAQ 225
>gi|255322343|ref|ZP_05363489.1| di-trans,poly-cis-decaprenylcistransferase [Campylobacter showae
RM3277]
gi|255300716|gb|EET79987.1| di-trans,poly-cis-decaprenylcistransferase [Campylobacter showae
RM3277]
Length = 233
Score = 245 bits (625), Expect = 5e-63, Method: Composition-based stats.
Identities = 91/231 (39%), Positives = 133/231 (57%), Gaps = 5/231 (2%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+H+ IIMDGNGRWA RGL R GH G V ++ + G+ L+++AFS NW+RP
Sbjct: 5 NHLAIIMDGNGRWAKRRGLLRTKGHETGANVVEQMCEFCIDEGVAVLSLYAFSTENWKRP 64
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
SE++ L++L+ FL S KN IK VIGN L D + + + ++ T N+ L
Sbjct: 65 KSEVAFLMELLHKFLLSKHDSFIKNGIKFNVIGNESPLSDKLKNEIADIKNATAQNSRLK 124
Query: 132 LFIAFNYSSRDEISRAIKNIFQDI---ESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
L +A NY ++DEI RA + + + ++ + LD + DL++RT
Sbjct: 125 LNLALNYGAKDEILRAFRRFCEKNGGEFDAQNLALNLSEDSLQACLD--ESVPIDLLVRT 182
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GGE+RLS+F+LWQ +Y+EF F P WPDF+RE ++ +DRRFGGL
Sbjct: 183 GGEQRLSNFMLWQASYAEFAFTPTLWPDFTREELAQITAKFKKKDRRFGGL 233
>gi|169628302|ref|YP_001701951.1| short-chain Z-isoprenyl diphosphate synthetase [Mycobacterium
abscessus ATCC 19977]
gi|169240269|emb|CAM61297.1| Probable short-chain Z-isoprenyl diphosphate synthetase
[Mycobacterium abscessus]
Length = 260
Score = 245 bits (625), Expect = 5e-63, Method: Composition-based stats.
Identities = 79/242 (32%), Positives = 128/242 (52%), Gaps = 7/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGL-PRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ ++ +S P HI ++ DGN RWA + G G+R G +E++ + G++ T
Sbjct: 20 LRQELVKASKPRHIAVLCDGNRRWARSAGYTDVSHGYRMGARKISEMLGWCQDAGVEMAT 79
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++ S N R +++EL+++I +++ +N VR +G+ L D++ +++
Sbjct: 80 VYLLSAENLTRDPDQLTELLEIITDVVEEL--CAPQNKWSVRSVGDLDLLPDEVAERMRQ 137
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLD 175
A + G ++ +A Y R EI+ A++ + + + V I++ L
Sbjct: 138 AVKSAPSDAGFHVNVAVGYGGRQEITDAVRTLLNKELANGASAEQLVQAVTVDAISENLY 197
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
TS PDPDL+IRT GE+RLS FLLWQ AYSE F YWP+F R F AL Y R+RR
Sbjct: 198 TSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTDAYWPEFRRVDFLRALRDYAARNRR 257
Query: 236 FG 237
FG
Sbjct: 258 FG 259
>gi|163841776|ref|YP_001626181.1| trans,cis-farnesyl diphosphate synthase [Renibacterium salmoninarum
ATCC 33209]
gi|162955252|gb|ABY24767.1| trans,cis-farnesyl diphosphate synthase [Renibacterium salmoninarum
ATCC 33209]
Length = 255
Score = 245 bits (625), Expect = 5e-63, Method: Composition-based stats.
Identities = 80/241 (33%), Positives = 116/241 (48%), Gaps = 7/241 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ S+ P H+ I++DGN RWA GH+ G+E +E + + G+K LTI
Sbjct: 17 LAKSLKGQKIPAHVAIVVDGNRRWAKQFNATTGHGHQAGVEKIHEFLGWCQDFGVKTLTI 76
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S N R E+ EL+ +I + + + I V +G L D + L
Sbjct: 77 YMLSTENVNRSKEELDELLGIIATLMDRL---ESDKAISVSAMGAPELLPDYLAERLIRL 133
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIK----NIFQDIESGSVCSHDVDSSLIAKYLDT 176
+ L++ +A Y R EI A++ + + + ++D I++YL T
Sbjct: 134 TQHKPASEKLHINLAVGYGGRREIVDAVRGLLREAVTEGKDIGELAQELDVEDISRYLYT 193
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
S PDPDL IRT GE+RLS FLLWQ AYSE F WP F + F AL Y R RR+
Sbjct: 194 SGQPDPDLFIRTSGEQRLSGFLLWQSAYSEMYFCEVLWPAFRKVDFLRALRDYAGRHRRY 253
Query: 237 G 237
G
Sbjct: 254 G 254
>gi|226365327|ref|YP_002783110.1| short-chain Z-isoprenyl diphosphate synthase [Rhodococcus opacus
B4]
gi|226243817|dbj|BAH54165.1| short-chain Z-isoprenyl diphosphate synthase [Rhodococcus opacus
B4]
Length = 255
Score = 244 bits (624), Expect = 6e-63, Method: Composition-based stats.
Identities = 83/242 (34%), Positives = 122/242 (50%), Gaps = 7/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLT 59
++ + P HI ++ DGN RWA G GHR G +E++ GI+ T
Sbjct: 15 LLKRLDGLQHPRHIAVMCDGNRRWARENGFEDVSHGHRMGALKISEMLGWCDAAGIEMAT 74
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
I+ S N RR E+ L+++I +++ S N V+++G L + L++
Sbjct: 75 IYLLSTENLRRDPEELDTLLEIITDVVEE--ISGPDKNWSVKIVGALDLLPAEQSRRLRD 132
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLD 175
A T TG ++ +A Y R EI+ A++++ + + + + I +L
Sbjct: 133 AAAGTEGRTGTHVNVAIGYGGRQEIADAVQSLLSEKLLAGLAGDELVKSITVDGIDGHLY 192
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
TS PDPDL+IRT GE+RLS FLLWQ AYSE F YWP+F R F AL Y R RR
Sbjct: 193 TSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEIWFTEAYWPEFRRVDFLRALRDYAARHRR 252
Query: 236 FG 237
FG
Sbjct: 253 FG 254
>gi|192361948|ref|YP_001981612.1| undecaprenyl diphosphate synthase [Cellvibrio japonicus Ueda107]
gi|190688113|gb|ACE85791.1| undecaprenyl diphosphate synthase [Cellvibrio japonicus Ueda107]
Length = 249
Score = 244 bits (624), Expect = 6e-63, Method: Composition-based stats.
Identities = 90/231 (38%), Positives = 133/231 (57%), Gaps = 1/231 (0%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGN RWA RG+P +GH+ G+E +++AA E+ ++ LT+FAFS NWRRP
Sbjct: 7 RHVAIIMDGNNRWAKQRGMPGVSGHKVGVERIRDVMAACQELEVEVLTVFAFSSENWRRP 66
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E+ L+ L + +LK +LKK ++ +RVIGNR I + AE TR +
Sbjct: 67 PKEVDALMSLFQLYLKNEAKALKKKDVALRVIGNRSRFSPSIQQAIASAEAVTRGGST-T 125
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L IA +Y R +I++A +++ + G + ++D + +D+P DL+IRTGGE
Sbjct: 126 LVIAADYGGRWDIAQAAQHLAGQVARGELSVDEIDEHKLDSLTSLADLPPLDLLIRTGGE 185
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
R+S+FLLWQ AY+E F + WPDF A + R RRFG +
Sbjct: 186 LRISNFLLWQAAYAELYFSDKLWPDFDGSELKRAAESFYSRQRRFGMTGDQ 236
>gi|269219220|ref|ZP_06163074.1| di-trans,poly-cis-decaprenylcistransferase [Actinomyces sp. oral
taxon 848 str. F0332]
gi|269211367|gb|EEZ77707.1| di-trans,poly-cis-decaprenylcistransferase [Actinomyces sp. oral
taxon 848 str. F0332]
Length = 255
Score = 244 bits (624), Expect = 6e-63, Method: Composition-based stats.
Identities = 77/242 (31%), Positives = 128/242 (52%), Gaps = 7/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + S+ P HIG+++DGN RWA G GHR+G + NE + EVG++ +T+
Sbjct: 17 LMGGLESADLPRHIGVMLDGNRRWAKELGRNASFGHRRGADKINEFLTWCDEVGVQLVTL 76
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N +R EI L+++I + + +++ +GN L + + ++ A
Sbjct: 77 WLLSTDNLKRAREEIDTLLEIIAA---AVERLAAAHTWRLKTVGNLQMLPEPFVSRMEAA 133
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDT 176
E +T G+ + IA Y R EI+ A++++ + + + + I +L T
Sbjct: 134 ESKTSDVKGMQVNIAVGYGGRQEITDAVRSLLAEQATSGKTLAEVARSIKVDDITDHLYT 193
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
PDPDL+IRT GE+R+S F+LWQ ++E F YWPDF + F AL Y R+RR
Sbjct: 194 KGQPDPDLVIRTSGEQRMSGFMLWQTVHTELYFCEAYWPDFRKVDFLRALRDYTQRERRL 253
Query: 237 GG 238
G
Sbjct: 254 GR 255
>gi|326431644|gb|EGD77214.1| dehydrodolichyl diphosphate synthase [Salpingoeca sp. ATCC 50818]
Length = 331
Score = 244 bits (624), Expect = 6e-63, Method: Composition-based stats.
Identities = 76/232 (32%), Positives = 119/232 (51%), Gaps = 3/232 (1%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A++ + P H+ IMDGN RWA AGH G + + ++G+ +T++A
Sbjct: 11 AAVKTGPVPQHVAFIMDGNRRWARRAKTETVAGHSMGFSTLKKTLEWCLDLGVHMVTVYA 70
Query: 63 FSINNWRRPVSEISELVKLIKSFLKK---GFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
FS N++R E+ +L+KL + + + + + VRV+G+ L + + +
Sbjct: 71 FSSENFKRSEKEVGDLMKLAEEKFIQLLNEEEMIHRLGVCVRVLGDVKRLPPSLQQAIGK 130
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV 179
A D ++ NT L + F Y++R+E++ A I Q ++ G + D+ L+ + L T+
Sbjct: 131 AVDISKDNTRAILNVCFVYTAREEMAMAAHEITQAVQEGELYESDITEHLVEQCLYTNAS 190
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
P P LIIR+ GE RLSDFLLWQ AY F P WPDFS QY
Sbjct: 191 PPPSLIIRSSGEVRLSDFLLWQGAYVHLAFSPVLWPDFSFWDLVKCFLQYQQ 242
>gi|259507799|ref|ZP_05750699.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
efficiens YS-314]
gi|259164592|gb|EEW49146.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
efficiens YS-314]
Length = 222
Score = 244 bits (624), Expect = 7e-63, Method: Composition-based stats.
Identities = 84/220 (38%), Positives = 127/220 (57%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA +G+ R GHR+G V ++V A +G+ L+ +AFS NWRR E+
Sbjct: 1 MDGNGRWATEKGMKRTEGHRRGEAVLLDVVDACLALGVPYLSAYAFSTENWRRSTEEVRF 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ + L++ L + ++VR +G R L ++ L+ AE+ T+ NT + L + N
Sbjct: 61 LMGFNRDVLRRQRDGLHEKGVRVRWVGRRPRLWRSVIRELEAAEELTKDNTNMTLAMCVN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R EI A + I + +G + ++ +LD D+PD DL +R GEKR S+F
Sbjct: 121 YGGRAEIIDAAREIARQAAAGQLRPEQINEKTFPDFLDEPDMPDVDLFLRPSGEKRTSNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
LLWQ AY+E V+ + +PDF+ + F A+ +Y RDRRFG
Sbjct: 181 LLWQSAYAEMVYQDKLFPDFTPQDLFDAVEEYARRDRRFG 220
>gi|297183237|gb|ADI19376.1| undecaprenyl pyrophosphate synthase [uncultured Spirochaetales
bacterium HF0500_06B09]
Length = 307
Score = 244 bits (624), Expect = 7e-63, Method: Composition-based stats.
Identities = 92/231 (39%), Positives = 131/231 (56%), Gaps = 10/231 (4%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+GIIMDGNGRWA ARGL R G+R G + V +A++GI LT++AFS +NWRRP
Sbjct: 38 HVGIIMDGNGRWARARGLSRYDGYRAGTDAVRRAVECSADLGIGALTLYAFSSDNWRRPY 97
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+ L+ L + +L++ + ++V IG R + ++ +E T L L
Sbjct: 98 GEVQLLLSLFRWYLQRETANCVDQGVRVSFIGRRDRFPATLQREIERSESATDSCDQLLL 157
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT--SDVPDPDLIIRTGG 190
IA +YS+RDEI + D + L ++ + DLI+RTGG
Sbjct: 158 RIAADYSARDEILATAAMLSSDHPPTRSD--------FGRKLTGGVGNLSEVDLIVRTGG 209
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E+RLSDFLLW+ AY+E VFI WPDF+R +LN++ R+RRFGG+ K
Sbjct: 210 EQRLSDFLLWEAAYAELVFIKTLWPDFTRIDLERSLNEFRKRERRFGGIGK 260
>gi|256824594|ref|YP_003148554.1| Undecaprenyl pyrophosphate synthetase [Kytococcus sedentarius DSM
20547]
gi|256687987|gb|ACV05789.1| Undecaprenyl pyrophosphate synthetase [Kytococcus sedentarius DSM
20547]
Length = 262
Score = 244 bits (624), Expect = 7e-63, Method: Composition-based stats.
Identities = 85/238 (35%), Positives = 130/238 (54%), Gaps = 7/238 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P H+G+++DGN RWA ARG AGHR G E + E+GI+ +T++ S
Sbjct: 28 LDTDRLPCHVGVMLDGNRRWARARGSDPAAGHRAGAENIEPFLDWCEELGIEVVTLWMLS 87
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
+N +RP +E+ L+++I+ + ++ ++G L D VL++A QT
Sbjct: 88 TDNLQRPAAELEPLLRIIEKAV---CDLAATGRWRLHLVGALGLLPDASRDVLEDAVRQT 144
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVC----SHDVDSSLIAKYLDTSDVP 180
GL + +A +Y R EIS A+ + ++ ++ V + + I ++L T P
Sbjct: 145 AEVDGLLVNVAISYGGRQEISDAVAALLREWDACGVSLAEAAERMTPEAIGEHLYTKGQP 204
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DPDL+IRT GE+RLS FLLWQ SE+ F YWPDF R F AL Y R+RR+G
Sbjct: 205 DPDLVIRTSGEQRLSGFLLWQSEKSEYYFCEAYWPDFRRVDFLRALRAYAERERRYGR 262
>gi|237785176|ref|YP_002905881.1| Undecaprenyl pyrophosphate synthase [Corynebacterium kroppenstedtii
DSM 44385]
gi|237758088|gb|ACR17338.1| Undecaprenyl pyrophosphate synthase [Corynebacterium kroppenstedtii
DSM 44385]
Length = 326
Score = 244 bits (624), Expect = 7e-63, Method: Composition-based stats.
Identities = 88/277 (31%), Positives = 130/277 (46%), Gaps = 41/277 (14%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARG-LPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+V ++ P HI ++ DGN RWA G + GHR G + +E+V + E G++ +T
Sbjct: 52 LVRALQGKPVPRHIAVMCDGNRRWAREAGFIDVSHGHRVGAKKISELVQWSGERGVELVT 111
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
I+ S N R +E+ L ++I + S K N ++RV+G+R L D + L
Sbjct: 112 IYLLSTENLHRDKAELELLYRIIGDVSDELAKS--KLNARLRVVGHRDILPDALTDRLAA 169
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVC------------------ 161
E T +TG+ + +A Y R EI A++++ +D
Sbjct: 170 NEKATADHTGVCVNMAVGYGGRQEIVDAVRSLLEDRVKEKHEASRESSAKDDEGAHQVDS 229
Query: 162 --------------------SHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQ 201
+ + I+ +L TS PDPDL+IRT GE+RLS FLLWQ
Sbjct: 230 ASSSKASELGDDQRFSLDDIAEAITVQGISDHLYTSGQPDPDLVIRTSGEQRLSGFLLWQ 289
Query: 202 VAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
AYSE F YWP F R F AL ++ R+RRFG
Sbjct: 290 SAYSEIWFTDTYWPAFRRVDFLRALRDFSRRNRRFGR 326
>gi|242045600|ref|XP_002460671.1| hypothetical protein SORBIDRAFT_02g032900 [Sorghum bicolor]
gi|241924048|gb|EER97192.1| hypothetical protein SORBIDRAFT_02g032900 [Sorghum bicolor]
Length = 318
Score = 244 bits (623), Expect = 8e-63, Method: Composition-based stats.
Identities = 92/244 (37%), Positives = 132/244 (54%), Gaps = 7/244 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + + S P H+G+++DG+ RWA ARGL GH G V + GI+ LT+
Sbjct: 69 LRSGVRAESLPRHVGLVIDGHARWARARGLSVSEGHAVGRRTVERTVRLSRAWGIRALTV 128
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FA S N RP EI +KL K F++ + I++ +IG+ +L +EA
Sbjct: 129 FACSHENMTRPKEEIDFFMKLYKGFIRDNVDEFCREGIRLHLIGDSPGRPASLLRAAREA 188
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS--- 177
+ TR N+ + L +A YS R +I RA + + +++ + D+D +LIA L TS
Sbjct: 189 HEATRGNSEMVLMLAIGYSGRRDILRACRELAAEVQRDLLRPEDIDEALIAGKLGTSVAA 248
Query: 178 ----DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
PDPDL+IRT GE RLS+FLLWQ A+SE F WPDF + + AL Y R
Sbjct: 249 GGELSCPDPDLVIRTSGELRLSNFLLWQSAFSELFFSDVMWPDFGEDEYLRALRSYQTRR 308
Query: 234 RRFG 237
RRFG
Sbjct: 309 RRFG 312
>gi|316977558|gb|EFV60643.1| undecaprenyl diphosphate synthase [Trichinella spiralis]
Length = 273
Score = 244 bits (623), Expect = 8e-63, Method: Composition-based stats.
Identities = 88/252 (34%), Positives = 139/252 (55%), Gaps = 12/252 (4%)
Query: 1 MVASMMS-SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
M+A ++S P HI IMDGN R+A G+ +GH G E + + +VGI+ +T
Sbjct: 16 MMAKLLSLGPIPQHIAFIMDGNRRFATKLGMEATSGHEYGYETLMKTLQWCCKVGIREVT 75
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLK---KNNIKVRVIGNRLSLDDDILCV 116
+FA SI N++R +E++ L+ L + + +L +N+++ R GN L D+ +
Sbjct: 76 VFALSIENFKRSEAEVNALMNLARVKFTRILETLNSVEENDVRCRFFGNFDYLPGDVREL 135
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD--VDSSLIAKYL 174
++ +TR N GL L I F Y++ DE+ RA +I + ++ + + LI+K+L
Sbjct: 136 MEAIALKTRENKGLFLNICFPYTAFDELRRACISIMKTFKANGQPVEEDQLTVELISKHL 195
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN---- 230
D+ +PDL+IRT GE RLSDFLLWQ++YS F P WPD+S F A+ Y
Sbjct: 196 DSGCSTEPDLLIRTSGETRLSDFLLWQLSYSCLYFDPVLWPDYSFWNLFRAILFYQQNYE 255
Query: 231 --LRDRRFGGLS 240
R++G +S
Sbjct: 256 QIQEVRKYGKIS 267
>gi|237753236|ref|ZP_04583716.1| undecaprenyl pyrophosphate synthetase [Helicobacter winghamensis
ATCC BAA-430]
gi|229375503|gb|EEO25594.1| undecaprenyl pyrophosphate synthetase [Helicobacter winghamensis
ATCC BAA-430]
Length = 225
Score = 244 bits (623), Expect = 8e-63, Method: Composition-based stats.
Identities = 85/231 (36%), Positives = 122/231 (52%), Gaps = 7/231 (3%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IIMDGNGRWA R GH+ G + EI + GI L+++AFS NW+
Sbjct: 1 MPKHLAIIMDGNGRWAKNHLQMRTFGHKAGAKKIQEITEFCTKYGIAFLSLYAFSTENWK 60
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL-NT 128
RP +E+ L++L++ +L F + NNI + IG+ + + E T+
Sbjct: 61 RPKTEVDFLMRLLEEYLDSKFSTYLNNNIIFKAIGDLSIFSTQLQEKIHSLELVTKEQCN 120
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
GL +A NY S+DE+ RA + E + I LDT+ +P D+++RT
Sbjct: 121 GLTQILALNYGSQDELRRAFLKLVLKQER------NFSFDSIENALDTTGIPPVDMLVRT 174
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
GGE RLS+FLLWQ AY+E F WP F+ + L ++ R RRFGGL
Sbjct: 175 GGEMRLSNFLLWQSAYAELFFTKTLWPSFTSKELEAMLLEFKTRHRRFGGL 225
>gi|111022819|ref|YP_705791.1| di-trans,poly-cis-decaprenylcistransferase [Rhodococcus jostii
RHA1]
gi|110822349|gb|ABG97633.1| di-trans,poly-cis-decaprenylcistransferase [Rhodococcus jostii
RHA1]
Length = 279
Score = 244 bits (623), Expect = 8e-63, Method: Composition-based stats.
Identities = 84/242 (34%), Positives = 122/242 (50%), Gaps = 7/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLT 59
++ + P HI ++ DGN RWA G GHR G +E++ GI+ T
Sbjct: 39 LLKRLDGLQHPRHIAVMCDGNRRWARENGFEDVSHGHRMGALKISEMLGWCDAAGIEMAT 98
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
I+ S N RR E+ L+++I +++ S N V+++G L + L++
Sbjct: 99 IYLLSTENLRRDPGELDTLLEIITDVVEE--ISGPDKNWSVKIVGALDLLPAEQSRRLRD 156
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLD 175
A T TG ++ +A Y R EI+ A++++ + + D + I +L
Sbjct: 157 AAAGTEGRTGTHVNVAIGYGGRQEIADAVQSLLSEKLLAGLSGDDLVKSITIDGIDGHLY 216
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
TS PDPDL+IRT GE+RLS FLLWQ AYSE F YWP+F R F AL Y R RR
Sbjct: 217 TSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEIWFTEAYWPEFRRVDFLRALRDYAARHRR 276
Query: 236 FG 237
FG
Sbjct: 277 FG 278
>gi|152993421|ref|YP_001359142.1| undecaprenyl diphosphate synthase [Sulfurovum sp. NBC37-1]
gi|151425282|dbj|BAF72785.1| undecaprenyl diphosphate synthase [Sulfurovum sp. NBC37-1]
Length = 229
Score = 244 bits (622), Expect = 9e-63, Method: Composition-based stats.
Identities = 86/230 (37%), Positives = 131/230 (56%), Gaps = 8/230 (3%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEV-GIKNLTIFAFSINNWRR 70
++ IIMDGNGRWA RGL R GH +G E+ ++ A+ I+ +T +AFS NW+R
Sbjct: 7 KNLAIIMDGNGRWAQQRGLNRTKGHEQGAEIIRDVTVYCAKHPSIETVTFYAFSTENWKR 66
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL+ +L+K + + NN+ IGN + D + +K E+ TR NT L
Sbjct: 67 PKLEVEFLMKLLDRYLQKELDTYQNNNVCFEAIGNIGAFSDKLQKRIKITEEATRNNTDL 126
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY R EI+ A+ + + + +V + I+ L T D DL+IRT G
Sbjct: 127 THILALNYGGRAEITAAVNKLITEGKK------EVTEADISSALQTP-YSDIDLLIRTSG 179
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
E+R+S++LLWQ++Y+E F WPDF+ + + + R RRFGGL+
Sbjct: 180 EERISNYLLWQISYAELYFTETLWPDFTTQELDEIVTDFEQRTRRFGGLA 229
>gi|284161607|ref|YP_003400230.1| undecaprenyl diphosphate synthase [Archaeoglobus profundus DSM
5631]
gi|284011604|gb|ADB57557.1| undecaprenyl diphosphate synthase [Archaeoglobus profundus DSM
5631]
Length = 252
Score = 244 bits (622), Expect = 9e-63, Method: Composition-based stats.
Identities = 79/235 (33%), Positives = 126/235 (53%), Gaps = 3/235 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + PP H+ IMDGN R+A +GLP GH G E++ E+ IK +T
Sbjct: 12 LLKEVKKFPPPKHVAFIMDGNRRYAKKKGLPSYMGHFFGSRKAEEVLKWCLELKIKTVTA 71
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFY--SLKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFS N+RR E L KL++ L++ + KN ++VR++G R L +++ V+
Sbjct: 72 YAFSTENFRRSEEEKINLFKLMERELRRLMEDRRIHKNKVRVRIVGKRELLPENVQKVVD 131
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT-S 177
+ E TR NL IA Y R E+ AI+ + + +E G + ++D LI ++L + +
Sbjct: 132 DLERATRDYDRYNLNIALAYGGRQELVDAIRCVLRLVEGGKIRPEEIDRHLIERFLYSDN 191
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLR 232
D++IRTGGE+RLS+FL WQ F +WP+F + F A+ + R
Sbjct: 192 GYESVDILIRTGGEQRLSNFLPWQTTNCLAYFSDVFWPEFRKIDFLRAIRMWQRR 246
>gi|320333090|ref|YP_004169801.1| Undecaprenyl pyrophosphate synthase [Deinococcus maricopensis DSM
21211]
gi|319754379|gb|ADV66136.1| Undecaprenyl pyrophosphate synthase [Deinococcus maricopensis DSM
21211]
Length = 276
Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats.
Identities = 86/237 (36%), Positives = 124/237 (52%), Gaps = 6/237 (2%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
P H+G+I+DGN R+A A G+ R G+ GI+ +E++ EVG+ +TI+ S +N
Sbjct: 40 GRVPKHLGMILDGNRRYARAMGVGRELGYEFGIDKAHEVLQWCLEVGVPAVTIWVLSTDN 99
Query: 68 WRRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
+R E+ L+ L + + N ++VR IG ++L L E E T
Sbjct: 100 VKRDPDEVRHLMGLFDREARNLARDKRIHANRVRVRAIGQHHDFPVNVLEALSELEAATA 159
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLDTSDVPD 181
G+ L IA Y R+EI A++ + + + DV ++ ++ +L T+ PD
Sbjct: 160 HYDGMLLNIAVGYGGREEIVDAVRTYLRKADEDGLTLRDVADTLNAEHVSAHLYTAGTPD 219
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PD IIRT GE RLS F+LWQ YSEF F YWP F R F AL + RDRRFG
Sbjct: 220 PDFIIRTSGEIRLSGFMLWQSVYSEFYFCDVYWPGFRRVDFLRALRDFQGRDRRFGK 276
>gi|227495961|ref|ZP_03926272.1| undecaprenyl pyrophosphate synthetase [Actinomyces urogenitalis DSM
15434]
gi|226834449|gb|EEH66832.1| undecaprenyl pyrophosphate synthetase [Actinomyces urogenitalis DSM
15434]
Length = 269
Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats.
Identities = 89/225 (39%), Positives = 132/225 (58%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA ARGLPR GHR G +++A A E+GIK L+++AFS NWRR +E+
Sbjct: 42 MDGNGRWANARGLPRTEGHRAGESTMMDVIAGAVEIGIKELSVYAFSTENWRRSPAEVRF 101
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ + L+ L+ ++VR +G L +L ++ AE T N + L + N
Sbjct: 102 LMGFTRQVLRAQTEDLRAWGVQVRWVGREPRLWKSVLEEVRRAERLTAGNETMVLNMCLN 161
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R EI+ A + I Q++ +G + + V +A++L + + + DL+IRTGGE+R S+F
Sbjct: 162 YGGRAEIADAARAIAQEVAAGHLKASAVGERTVARHLYSPTMREVDLMIRTGGEQRTSNF 221
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
L+W+ AY+E F P WP+F R + A Y RDRRFGG +
Sbjct: 222 LMWEAAYAELYFSPLPWPEFDRTQLWKACQAYAERDRRFGGAVDQ 266
>gi|227497806|ref|ZP_03927991.1| undecaprenyl pyrophosphate synthetase [Actinomyces urogenitalis DSM
15434]
gi|226832766|gb|EEH65149.1| undecaprenyl pyrophosphate synthetase [Actinomyces urogenitalis DSM
15434]
Length = 261
Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats.
Identities = 79/250 (31%), Positives = 128/250 (51%), Gaps = 15/250 (6%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ A + P H+G+I+DGN RWA G GH++G + E + A + G++ +T+
Sbjct: 15 LAAQVDPQQVPGHVGVILDGNRRWAKQMGFVTSQGHKRGADKIEEFLGWAEDAGVRVVTL 74
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N R +E+S L+ +I ++ + +R++G L D + L++A
Sbjct: 75 WLLSTDNLSRDPAELSPLLDIIAQAVESLAAA---QRWSLRLVGAVDLLPDPLAERLRQA 131
Query: 121 EDQTR--------LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSS 168
T + + + IA Y R EI+ A++++ ++ + +V
Sbjct: 132 VASTHAAGGEADPGDGRVQVNIAVGYGGRQEIADAVRDLLRERAAAGATLEEVADSLSEE 191
Query: 169 LIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQ 228
I ++L T PDPDL+IRT GE+RLS FLLWQ +SE+ F YWPDF R F AL
Sbjct: 192 DITEHLYTKGQPDPDLVIRTSGEQRLSGFLLWQSVHSEYYFCEVYWPDFRRIDFLRALRD 251
Query: 229 YNLRDRRFGG 238
Y+ R+RR G
Sbjct: 252 YSRRERRLGR 261
>gi|297626870|ref|YP_003688633.1| Undecaprenyl pyrophosphate synthase
(di-trans,poly-cis-decaprenylcistransferase)
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
gi|296922635|emb|CBL57212.1| Undecaprenyl pyrophosphate synthase
(di-trans,poly-cis-decaprenylcistransferase)
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
Length = 269
Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats.
Identities = 81/245 (33%), Positives = 124/245 (50%), Gaps = 10/245 (4%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAAR--GLPRCAGHRKGIEVFNEIVAAAAEVGIKNL 58
+ A + P H+ ++ DGN RWA G P G++ G + E V EVGI +
Sbjct: 28 LRAGLDPREMPRHVAVLADGNRRWARTNAPGQPLEVGYKAGADKLREFVGWCDEVGIGVV 87
Query: 59 TIFAFSINNWRRP-VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
T++ S N +R E+ L+ +I + + +V+ +G+ L + + L
Sbjct: 88 TLWVLSTENLQRSGPDELLPLMGVIDRLTR---DLAAVPDYRVQPMGDLDLLPESLATTL 144
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKY 173
EA +T NTG+++ IA Y R E+ A++++ + ++ D + IA +
Sbjct: 145 CEAALETIDNTGIHINIAVAYGGRHELRDAVRSLLAAEAAKGTTLEELSRTLDPNQIADH 204
Query: 174 LDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
L T PDPDL+IRT GE+RLS FL WQ A+SE F WPDF + F+ AL Y R+
Sbjct: 205 LYTKGQPDPDLLIRTSGEQRLSGFLPWQSAHSELYFCEALWPDFRKIDFYRALRSYQQRE 264
Query: 234 RRFGG 238
RRFG
Sbjct: 265 RRFGK 269
>gi|254468133|ref|ZP_05081539.1| undecaprenyl pyrophosphate synthetase 1 [beta proteobacterium KB13]
gi|207086943|gb|EDZ64226.1| undecaprenyl pyrophosphate synthetase 1 [beta proteobacterium KB13]
Length = 229
Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats.
Identities = 84/236 (35%), Positives = 127/236 (53%), Gaps = 7/236 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M + P H+ IIMDGNGRWA R LPR GH +G++ ++I + G+K+L+++AFS
Sbjct: 1 MSKYNIPHHVAIIMDGNGRWAKNRNLPRNNGHEEGLKTLSKITPKVFDAGVKSLSVYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP +EI L+ L + ++ F + N IK ++GN + +K E+ T
Sbjct: 61 SENWYRPKNEIKHLMDLFEKAIESNFQYMVDNRIKFNLLGNIKKFPSSLQKKIKNLEEIT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ N N ++A NY S++E+ A E+ + + +PD DL
Sbjct: 121 KKNRDYNFYLAANYGSKEELIFAA-------ETLRDSTSKITEKSFKNAFYAPHLPDVDL 173
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
+IRTGGE RLS+FLLWQ AY+E F WPDF AL ++ + R+FG ++
Sbjct: 174 LIRTGGETRLSNFLLWQSAYAEIYFTKVLWPDFKPIHLKKALEFFSGKIRKFGKIN 229
>gi|157112048|ref|XP_001657391.1| dehydrodolichyl diphosphate synthase (dedol-pp synthase) [Aedes
aegypti]
gi|108878222|gb|EAT42447.1| dehydrodolichyl diphosphate synthase (dedol-pp synthase) [Aedes
aegypti]
Length = 318
Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats.
Identities = 80/234 (34%), Positives = 129/234 (55%), Gaps = 3/234 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + + P H+ IMDGN R+A + + GH KG + +E + +VGI+ +T+
Sbjct: 24 IIKVLKAGPVPRHVAFIMDGNRRFARKENIAKAEGHSKGFDKLSETLQWCQDVGIREVTV 83
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKK---GFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+ L + +K L + I +R+IGN L DI +
Sbjct: 84 YAFSIENFKRTKEEVDTLMDLAREKFRKLLEERDKLHERGICIRIIGNMGLLPVDIQHCM 143
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
EA T+ N L +AF+Y+SRDEI+ +I+ + + + G + + D+D ++ + + T
Sbjct: 144 AEAVLLTQNNQNAFLNVAFSYTSRDEIAHSIRVVAEGVRDGQLQARDIDEEVLTRCMYTK 203
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
DPDL++RT GE RLSDFLLWQ + + F WP+FS F A+ Y
Sbjct: 204 QCTDPDLLVRTSGEMRLSDFLLWQSSSTVIYFTKTLWPEFSIWHLFGAVFYYQR 257
>gi|311743134|ref|ZP_07716942.1| di-trans,poly-cis-decaprenylcistransferase [Aeromicrobium marinum
DSM 15272]
gi|311313814|gb|EFQ83723.1| di-trans,poly-cis-decaprenylcistransferase [Aeromicrobium marinum
DSM 15272]
Length = 253
Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats.
Identities = 74/241 (30%), Positives = 120/241 (49%), Gaps = 7/241 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P H+G I+DGN RWA L G+R G +E + ++G++ +T
Sbjct: 15 LTRRLDPRRLPHHVGAIVDGNRRWAKGADLDLERGYRAGAAKVDEFLGWCDDLGVQIVTF 74
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N +R E+ ++ ++ + + +V ++G+ L + L+ A
Sbjct: 75 WVLSTDNLQRSPEEVRSILGAVEDLVDRL---SADGRWRVAIMGSLDLLPPESATRLQRA 131
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDT 176
D T + GL + + Y R E++ AI+++ + + +V +L IA++L T
Sbjct: 132 ADSTAGHEGLRVNVCVGYGGRQELTDAIRSLLLEQAAKGRDLTEVAETLVVDDIAEHLYT 191
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
PDPDL+IRT GE+RLS FLLWQ +SEF F WP F R A+ Y R RRF
Sbjct: 192 KGQPDPDLVIRTSGEQRLSGFLLWQSVHSEFYFCDALWPAFRRVDLLRAMRSYAARQRRF 251
Query: 237 G 237
G
Sbjct: 252 G 252
>gi|302540347|ref|ZP_07292689.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces
hygroscopicus ATCC 53653]
gi|302457965|gb|EFL21058.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces
himastatinicus ATCC 53653]
Length = 313
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 86/230 (37%), Positives = 134/230 (58%), Gaps = 1/230 (0%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ IIMDGNGRWAA RGL R GH G+ +V A E G+++L++F FS NW
Sbjct: 84 GMPRHLAIIMDGNGRWAALRGLSRTRGHEAGVLALPRVVDTALEEGVEHLSLFFFSTENW 143
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP +E++ L++L L F + + +++R +G+ L L L+ AE +T N
Sbjct: 144 NRPRAEVAALMRLTAQ-LADVFRAYGERGVRLRWLGSEARLPRATLAALRRAEAETAGNR 202
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+ L FN+ R+EI+RA ++ + G++ +D +L ++L D+PD D+++RT
Sbjct: 203 AMTLAFCFNHGGREEIARAATSLARASADGALDPGLIDEALFTRHLPHGDLPDIDMLVRT 262
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GE+R+S+F+LW+ AY+E F+ WPDF+ E L + R RRFG
Sbjct: 263 SGEQRISNFMLWRAAYAELFFVDTLWPDFTAEELRGLLAAFAGRKRRFGA 312
>gi|297203434|ref|ZP_06920831.1| long-chain Z-isoprenyl diphosphate synthase [Streptomyces sviceus
ATCC 29083]
gi|297148410|gb|EDY60394.2| long-chain Z-isoprenyl diphosphate synthase [Streptomyces sviceus
ATCC 29083]
Length = 631
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 87/236 (36%), Positives = 132/236 (55%), Gaps = 2/236 (0%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P H+ ++MDGNGRWA RGL R GHR GI E V A ++G++NLT++AF
Sbjct: 376 QIAADQMPSHVAVVMDGNGRWAEQRGLSRSDGHRAGILATRETVYGALDIGLRNLTLYAF 435
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R EI+ ++ ++ L +G ++ N++ R G L +D++ L E +
Sbjct: 436 STENWKRDPEEIAVILSALRYELTEG--PIRDLNVRQRWAGQPGRLPEDLVQALMHQERR 493
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
TR TG+ L + NY RDEI+R + Q +G V + ++L D+PD D
Sbjct: 494 TRARTGMTLTVCINYGGRDEITRTAAALAQATRAGEVNPDLIGPDDFTRHLPHPDMPDVD 553
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
L+ RTG E+R S+FL W Y+E F P++WPD R + A+ +Y R RR G +
Sbjct: 554 LLWRTGNEQRTSNFLPWHATYAELYFTPDHWPDTDRRDLWKAITEYTRRQRRHGAV 609
>gi|25027611|ref|NP_737665.1| putative undecaprenyl diphosphate synthase [Corynebacterium
efficiens YS-314]
gi|23492893|dbj|BAC17865.1| putative undecaprenyl diphosphate synthase [Corynebacterium
efficiens YS-314]
Length = 304
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 84/243 (34%), Positives = 127/243 (52%), Gaps = 7/243 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGL-PRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
++ + + P H+ I+ DGN RWA G GHR G + E+V +V + +T
Sbjct: 64 LLKELNGARQPGHVAIMCDGNRRWAREAGFVDLSHGHRVGAKKIGELVRWCDDVDVDLVT 123
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++ S N R +E+ L +I + + SL + N +VR++G+ L + L+
Sbjct: 124 VYLLSTENLGRDEAELQLLYDIIGDVVAEL--SLPETNCRVRLVGHLDLLPKEFAERLRG 181
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIF----QDIESGSVCSHDVDSSLIAKYLD 175
+T +TG+ + IA Y R EI A++++ + ++ VD+ I+ +L
Sbjct: 182 TVCETVDHTGVAVNIAVGYGGRQEIVDAVRDLLTSARDEGKTLDEVIESVDAQAISTHLY 241
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
TS PDPDL+IRT GE+RLS F+LWQ AYSE F YWP F R F AL Y+ R RR
Sbjct: 242 TSGQPDPDLVIRTSGEQRLSGFMLWQSAYSEIWFTDTYWPAFRRIDFLRALRDYSQRSRR 301
Query: 236 FGG 238
FG
Sbjct: 302 FGK 304
>gi|300781598|ref|ZP_07091452.1| Di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
genitalium ATCC 33030]
gi|300533305|gb|EFK54366.1| Di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
genitalium ATCC 33030]
Length = 259
Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats.
Identities = 81/243 (33%), Positives = 123/243 (50%), Gaps = 7/243 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLT 59
+ + + P HI ++ DGN RWA G A GHR G E+VA +AE+ + +T
Sbjct: 19 LKHELQGKNQPKHIAVMADGNRRWAREAGFTDIAHGHRVGAAKIAELVAWSAEMNVDVVT 78
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
I+ S N R E+ L +I + + + ++R++G+ L + + ++
Sbjct: 79 IYLLSTENLSRTAEEVQLLYDIISGVVDEL--CSDEFEARIRLVGHLDLLPEKVSQRMRS 136
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQ----DIESGSVCSHDVDSSLIAKYLD 175
A T G+ + IA Y R EI A+++ + + + + V ++++L
Sbjct: 137 AAAATEAKNGIVVNIAVGYGGRQEIVDAVQHFIRAKVDEGVPAAELADHVSVESLSEHLY 196
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
TS PDPDL+IRT GE+RLS FLLWQ AYSE F YWP F + F AL Y+ R RR
Sbjct: 197 TSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEIWFTDTYWPAFRKIDFLRALRDYSQRSRR 256
Query: 236 FGG 238
FG
Sbjct: 257 FGK 259
>gi|295313587|ref|ZP_06804176.1| undecaprenyl pyrophosphate synthase [Francisella tularensis subsp.
holarctica URFT1]
Length = 225
Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats.
Identities = 90/225 (40%), Positives = 136/225 (60%), Gaps = 1/225 (0%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA +R PR GHR + + + E I+ LT+FAF +NW RP E+S+
Sbjct: 1 MDGNGRWAKSRLKPRIFGHRNSVSSVDATIEYCVENNIEMLTLFAFGRDNWLRPAQEVSD 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ L LK L NNI V V+G+R L + ++ +++ +E T+ NTGL L +A +
Sbjct: 61 LMDLFYKTLKDKTPKLHDNNIVVTVVGDRSRLSNKLIGMIEYSESLTKSNTGLKLRLAVD 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y+ R +I A + I ++++ G + ++D + AKYL ++P DL+IRT GE RLSDF
Sbjct: 121 YAGRWDIVEATRAIAREVDIGKLSVDEIDQNSFAKYLVGGNMP-VDLLIRTSGEVRLSDF 179
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+LWQ+AY+E F WPDFS++ A+ + R RRFG + ++
Sbjct: 180 MLWQLAYAEMYFTDIMWPDFSKQELTRAVEYFYSRQRRFGKIGEQ 224
>gi|308161827|gb|EFO64259.1| Undecaprenyl pyrophosphate synthase [Giardia lamblia P15]
Length = 266
Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats.
Identities = 84/239 (35%), Positives = 136/239 (56%), Gaps = 9/239 (3%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ +IMDGNGRWA + R GH +G+ V +V GI+ LT++AFS NW
Sbjct: 2 IPTHVAVIMDGNGRWARRQLQERSFGHEQGVAVLESVVDECISCGIRFLTVYAFSTENWS 61
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRL-SLDDDILCVLKEAEDQTRLNT 128
RP +E+S L +L+ + +++ + ++ ++KV+ G R + ++++ + E T T
Sbjct: 62 RPPAEVSFLFELLSATIQRVRATYRERDVKVQFCGERTAQIPENVITAMNCIEQDTATCT 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSH-----DVDSSLIAKYLDT---SDVP 180
GL L + FNY EI++A +++ D G + + + +DT + +P
Sbjct: 122 GLILSVCFNYGGHTEIAQACRSVLADCLDGDAVENIRARLQMPIEQFIQQIDTHLYASLP 181
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DL+IRTG EKRLS+FL W +AY+E +FI WP+FS + F L+++ R RRFGG+
Sbjct: 182 PVDLLIRTGCEKRLSNFLPWHLAYAEIIFIDLLWPEFSVQAFKECLDEFASRTRRFGGV 240
>gi|311742975|ref|ZP_07716783.1| di-trans,poly-cis-decaprenylcistransferase [Aeromicrobium marinum
DSM 15272]
gi|311313655|gb|EFQ83564.1| di-trans,poly-cis-decaprenylcistransferase [Aeromicrobium marinum
DSM 15272]
Length = 255
Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats.
Identities = 91/233 (39%), Positives = 134/233 (57%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P H+ I+MDGNGRWA ARGLPR AGH G ++V A EVG+ ++ +AFS
Sbjct: 21 LPADQVPGHVAIVMDGNGRWAKARGLPRTAGHEMGEAALFDVVEGAIEVGVTAVSAYAFS 80
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+R E+ L+ + +++ + + ++VR G R L ++ L+ AE+ T
Sbjct: 81 TENWKRSPEEVRFLMGFNRDVIRRRRDQMHELGVRVRWAGRRPRLWRSVIKELEAAEELT 140
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
R N L L + NY R E++ A + +D+ +G V + VD + A+YLD D+ D DL
Sbjct: 141 RDNRVLTLTMCVNYGGRAEVADAAAALARDVAAGRVNPNRVDERVFARYLDEPDMADVDL 200
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE+R S+FLLWQ AY+E VF WPD R + A+ +Y R RR+G
Sbjct: 201 FWRTSGEQRTSNFLLWQSAYAEMVFSDIAWPDVDRLALWAAIEEYAARHRRYG 253
>gi|308809740|ref|XP_003082179.1| COG0020: Undecaprenyl pyrophosphate synthase (ISS) [Ostreococcus
tauri]
gi|116060647|emb|CAL57125.1| COG0020: Undecaprenyl pyrophosphate synthase (ISS) [Ostreococcus
tauri]
Length = 740
Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats.
Identities = 82/241 (34%), Positives = 130/241 (53%), Gaps = 11/241 (4%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
++ + S P+H+ IIMDGN RWA R LPR GH +G+ +V A ++ LT+F
Sbjct: 140 LSGLASDRVPNHVAIIMDGNARWATRRRLPRSVGHERGVSALRGVVRCCAAWDVRTLTVF 199
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS N+ R E++EL+ L+++ L+ L K ++V VIG+ + + + + A
Sbjct: 200 AFSQENFGRNQVEVTELMALVETALQDELPLLVKEGVRVEVIGDLDKVSEGVREAVGRAV 259
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD--- 178
+ T+ N+ L L +A +Y R +I +A K + + SG + + D+D +++ +L T D
Sbjct: 260 EATKHNSTLRLVVALSYGGRQDIVQAAKALANKVASGELRAEDIDEDVLSAHLSTYDARS 319
Query: 179 --------VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
PDL+IRT GE RLS+FLLW +AY+E F WP+F A + Y
Sbjct: 320 ANEDPLNFSQHPDLLIRTSGEMRLSNFLLWDLAYTELYFANMMWPEFGEAELRRAFHAYA 379
Query: 231 L 231
Sbjct: 380 K 380
>gi|56416456|ref|YP_153530.1| putative undecaprenyl diphosphate synthase [Anaplasma marginale
str. St. Maries]
gi|56387688|gb|AAV86275.1| putative undecaprenyl diphosphate synthase [Anaplasma marginale
str. St. Maries]
Length = 232
Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats.
Identities = 82/238 (34%), Positives = 135/238 (56%), Gaps = 8/238 (3%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
S M+ P H+ +IMDGNGRWA +RGLP+ + +G+ ++V A I++LT++A
Sbjct: 1 MSAMAHKLPKHVAVIMDGNGRWAKSRGLPKIEAYTQGMLAAKKVVEACVHHAIRHLTLYA 60
Query: 63 FSINNWRRPVSEISELVKLIKSFLK--KGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FS+ NW R E+S+++ L ++L + + + +R +G+ L D++ + +
Sbjct: 61 FSLENWLRSTEEVSDIMSLFTNYLSSPELRKLSDDHGVSIRFVGDLKLLRADLVERMSDI 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ TR N L L +A +Y ++ +I +A+ VD + ++ T D+P
Sbjct: 121 QSVTRNNDALYLNVAVSYGAKQDIIQAVNAALDSGV------ESVDGETLRSFMWTKDLP 174
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
D DL+IR GGEKR+S+FLLWQ+AY+E F WPDF+ F AL+ Y R+R++G
Sbjct: 175 DVDLLIRAGGEKRISNFLLWQLAYAELYFCDIMWPDFTAAHFSDALDSYLARNRKYGR 232
>gi|289705002|ref|ZP_06501415.1| di-trans,poly-cis-decaprenylcistransferase [Micrococcus luteus
SK58]
gi|289558261|gb|EFD51539.1| di-trans,poly-cis-decaprenylcistransferase [Micrococcus luteus
SK58]
Length = 287
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 94/242 (38%), Positives = 139/242 (57%), Gaps = 8/242 (3%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P H+ I+MDGNGRWA RGLPR GHR G ++VA A E+GI +++ +AF
Sbjct: 21 RIDPRFVPRHVAIVMDGNGRWANQRGLPRTEGHRAGEAALLDVVAGAVELGIGHVSAYAF 80
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NWRR E+ L+ + L++ +L N+++R G L ++ L+EAE+
Sbjct: 81 STENWRRSAEEVRFLMGFSRDVLRRQRDTLHSWNVRIRWNGRAPRLWTPVIRELQEAEEL 140
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD-------- 175
TR NTG L + NY SR EI ++ I +++ +G + ++ +I +YLD
Sbjct: 141 TRHNTGTTLHMCVNYGSRAEILDGVQAIAEEVRAGRMRPGEISEDVITRYLDRGFRTGQD 200
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
VPD DL +RT GE+RLS++LLWQ AY+E +F+ WPD R + A+ Y RDRR
Sbjct: 201 VDVVPDVDLFLRTSGEQRLSNYLLWQSAYAELLFLDVLWPDVDRRTLWAAVETYARRDRR 260
Query: 236 FG 237
+G
Sbjct: 261 YG 262
>gi|300789889|ref|YP_003770180.1| undecaprenyl pyrophosphate synthetase [Amycolatopsis mediterranei
U32]
gi|299799403|gb|ADJ49778.1| undecaprenyl pyrophosphate synthetase [Amycolatopsis mediterranei
U32]
Length = 252
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 83/241 (34%), Positives = 125/241 (51%), Gaps = 7/241 (2%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGL-PRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P HI I++DGN RWA G GHR G + + ++ E ++ +T+
Sbjct: 13 LIQQAAGRHPRHIAIMLDGNRRWAREAGFTDVSDGHRAGAKKIADFLSWCQEADVEVVTM 72
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N R E++ L+K+I + + ++R++G L ++ L EA
Sbjct: 73 WLLSTDNLNRDPDELTPLLKIITDVTDEL--AGPGTAWQLRIVGALDLLPAEVAKRLSEA 130
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLDT 176
+T TG+ + IA Y R EI+ A++ + + H++ D I+++L T
Sbjct: 131 AARTEGRTGMEVNIAVGYGGRQEIADAVRKLLRQHADEGTSIHELAKILDVDHISEHLYT 190
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
S PDPDLIIRT GE+RLS FLLWQ A+SEF F YWP F R F A+ Y R RRF
Sbjct: 191 SGQPDPDLIIRTSGEQRLSGFLLWQSAHSEFWFTEAYWPAFRRVDFLRAIRDYAWRHRRF 250
Query: 237 G 237
G
Sbjct: 251 G 251
>gi|326936335|ref|XP_003214211.1| PREDICTED: dehydrodolichyl diphosphate synthase-like [Meleagris
gallopavo]
Length = 333
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 82/229 (35%), Positives = 128/229 (55%), Gaps = 3/229 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P H+ IMDGN R+A + R GH +G + + + +GI+ +T++AFS
Sbjct: 20 IKAGPMPKHVAFIMDGNRRYAQKCHVERQQGHSQGFDKLAQTLRWCLNLGIREVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSFLKK---GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R E+ L+ L + + +LKK+ + +RV+G+ L DI ++ +A
Sbjct: 80 IENFKRSKEEVDGLMDLARQKFSRLLEERENLKKHGVCIRVLGDLPLLPLDIQELIAQAV 139
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
TR L + F Y+SR EIS A++ + +E G + DV SL+ K L TS+ PD
Sbjct: 140 MATRNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLEPSDVSESLLDKCLYTSNSPD 199
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
PDL+IRT GE RLSDFLLWQ ++S VF WP++S A+ ++
Sbjct: 200 PDLLIRTSGEVRLSDFLLWQTSHSCLVFQSVLWPEYSFWNLCEAILRFQ 248
>gi|118101494|ref|XP_417694.2| PREDICTED: similar to Dehydrodolichyl diphosphate synthase [Gallus
gallus]
Length = 333
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 81/229 (35%), Positives = 127/229 (55%), Gaps = 3/229 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P H+ IMDGN R+A + R GH +G + + + +GI+ +T++AFS
Sbjct: 20 IKAGPMPKHVAFIMDGNRRYAQKCHVERQQGHSQGFDKLAQTLRWCLNLGIREVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R E+ L+ L + + LKK+ + +RV+G+ L D+ ++ +A
Sbjct: 80 IENFKRSKEEVDGLMDLARQKFSRLLEEQENLKKHGVCIRVLGDLPLLPLDVQELIAQAV 139
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
TR L + F Y+SR EIS A++ + +E G + DV SL+ K L TS+ PD
Sbjct: 140 MATRNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLEPSDVSESLLDKCLYTSNSPD 199
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
PDL+IRT GE RLSDFLLWQ ++S VF WP++S A+ ++
Sbjct: 200 PDLLIRTSGEVRLSDFLLWQTSHSCLVFQSVLWPEYSFWNLCEAILRFQ 248
>gi|269794157|ref|YP_003313612.1| Undecaprenyl pyrophosphate synthetase [Sanguibacter keddieii DSM
10542]
gi|269096342|gb|ACZ20778.1| Undecaprenyl pyrophosphate synthetase [Sanguibacter keddieii DSM
10542]
Length = 251
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 82/241 (34%), Positives = 128/241 (53%), Gaps = 7/241 (2%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
++ S P H+G+I+DGN RWA + G P GHR+G + E + + ++GI+ +T++
Sbjct: 14 AKALRSRPLPRHVGVILDGNRRWAKSFGEPAAHGHRRGADRIEEFLGWSEDLGIEVVTLW 73
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
S +N R E+ L+ +I+ + + ++RV+G L +D L+ A+
Sbjct: 74 MLSTDNLSRGADELDALLTIIEDAV---ADLARSRRWRLRVVGRLDLLPEDFAARLRAAQ 130
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTS 177
+T GL + +A Y R EI+ A++ + + +D I ++L T
Sbjct: 131 AETDDVEGLQVNVAIGYGGRHEIADAVRAFLTERAEAGDSLAEVAASIDVDHIGQHLYTR 190
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDP+L+IRT GE+RLS FLLWQ A SEF F YWPDF R + AL Y+ R+RR G
Sbjct: 191 GQPDPELVIRTSGEQRLSGFLLWQSANSEFYFCEAYWPDFRRVDYLRALRAYSQRERRLG 250
Query: 238 G 238
Sbjct: 251 R 251
>gi|195438892|ref|XP_002067366.1| GK16221 [Drosophila willistoni]
gi|194163451|gb|EDW78352.1| GK16221 [Drosophila willistoni]
Length = 302
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 77/230 (33%), Positives = 125/230 (54%), Gaps = 4/230 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+ P H+ +MDGN R+A ++ + + GH G + + ++GI+ +T FAFSI N
Sbjct: 24 AHIPHHVAFVMDGNRRFARSQHIDKIEGHSMGFAKLADCLRWCLDIGIREVTTFAFSIEN 83
Query: 68 WRRPVSEISELVKLIKSFLKK---GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
++R E+ L L + K L ++ I++RVIGN L D+ ++ A +T
Sbjct: 84 FKRSSEEVEGLFNLAREKFCKLLDETDRLNEHGIRIRVIGNIELLPLDLQKLIALAMLRT 143
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N L L +AF+Y+SRDEI++A+K + + E G + D+ L+ + + T P PDL
Sbjct: 144 EHNDKLFLNVAFSYTSRDEITQAVKTVLELGEEGHLTGEDISERLLEECMYTRHSPPPDL 203
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
+ RT GE RLSDF++WQ++ S F WP + F ++ + RDR
Sbjct: 204 VFRTSGESRLSDFMMWQLSNSVLYFTNVLWPQITIWNFLGSILAFQ-RDR 252
>gi|161528924|ref|YP_001582750.1| undecaprenyl diphosphate synthase [Nitrosopumilus maritimus SCM1]
gi|160340225|gb|ABX13312.1| undecaprenyl diphosphate synthase [Nitrosopumilus maritimus SCM1]
Length = 263
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 81/242 (33%), Positives = 128/242 (52%), Gaps = 4/242 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + + P+H+ +I+DGN RWA AGH KG + ++ E IK +T+
Sbjct: 22 LESEIQTGDIPNHVALILDGNRRWAKRHLSLPKAGHWKGADAVENLLDWCEEFNIKIVTL 81
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+A S N R E+ L +LI+ L+K + + ++ ++V+ IG L D I +L+
Sbjct: 82 YALSAENLDRNDEELDHLYELIRMRLEKLYNDPRIHRSKMRVKGIGRIELLPDSIKEILQ 141
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
+ +D T+ L IA Y + E+ A+K I + I+ G + + I L TS
Sbjct: 142 KLDDATKDYDNHFLNIALAYGGQYELVDAVKKIGEKIKDGQLDVEKITKKEIESNLYTSH 201
Query: 179 VPD--PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
+P PD+I+RT GEKRLS FL+WQ AYSE VF+ +WP+F + A+ + R RR
Sbjct: 202 LPQSSPDMILRTSGEKRLSGFLMWQSAYSELVFMDIFWPEFRKIDLMRAIRTFQERKRRL 261
Query: 237 GG 238
G
Sbjct: 262 GK 263
>gi|328771204|gb|EGF81244.1| hypothetical protein BATDEDRAFT_10818 [Batrachochytrium
dendrobatidis JAM81]
Length = 294
Score = 242 bits (619), Expect = 3e-62, Method: Composition-based stats.
Identities = 75/234 (32%), Positives = 123/234 (52%), Gaps = 4/234 (1%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
++ ++ P H+ +MDGN R+A L GH+ G + E + ++GIK +T++
Sbjct: 28 LSILVLGPVPKHVAFVMDGNRRFAKRLHLQPSEGHQLGFKKLEETLDWCMKLGIKVVTVY 87
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCVLK 118
AFSI N++RP E+ L++L + + ++K+ I +RVIG+ L + +
Sbjct: 88 AFSIENFKRPKEEVDVLMELAERKFGEFVTKSDLVQKHGISIRVIGDTKLLREPVYKAAC 147
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
+ +T NTG L I Y+S++EI A++ + Q ++SG V DV +I + L T +
Sbjct: 148 KVTSETCNNTGAILNICCPYTSQNEILVAMQEVVQGVQSGKVLESDVCEKMIEQCLYTEE 207
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSE-FVFIPEYWPDFSRELFFHALNQYNL 231
P D+++RT GE RLSDF+LWQ F + WP+FS L Y
Sbjct: 208 CPPLDVLVRTSGEARLSDFMLWQAGRDCLLHFPKKLWPEFSFWDMLPILLHYQA 261
>gi|317051360|ref|YP_004112476.1| undecaprenyl diphosphate synthase [Desulfurispirillum indicum S5]
gi|316946444|gb|ADU65920.1| undecaprenyl diphosphate synthase [Desulfurispirillum indicum S5]
Length = 242
Score = 242 bits (619), Expect = 3e-62, Method: Composition-based stats.
Identities = 86/231 (37%), Positives = 134/231 (58%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+ P H+GIIMDGNGRWA RG+ R GH +G+EV IV A I +T++AFS N
Sbjct: 12 ETLPRHLGIIMDGNGRWAQQRGMERIEGHARGMEVARTIVTYLARRHIPYVTLYAFSTEN 71
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
W R +E++ L +KS+L++ + +NNI+ R IG +++ +++EAE+++ N
Sbjct: 72 WNRDAAEVAFLNLALKSYLEEEMPIMMENNIRFRAIGTIDRFSSELVRLIREAEERSASN 131
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
TG L +A +Y + E+ +++NI + G + D+ + ++ ++ + D I+R
Sbjct: 132 TGTTLVLAISYGGQQEVVDSVRNIGNKLLQGHMKLEDISIQTLLEHCYFPELGECDYIVR 191
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
T GE RLS+FL +Q AYSE F P WPDF+ AL + R RRFG
Sbjct: 192 TSGEMRLSNFLTFQSAYSELYFTPTLWPDFTETEMAAALEDFTRRTRRFGK 242
>gi|295395786|ref|ZP_06805974.1| di-trans,poly-cis-decaprenylcistransferase [Brevibacterium
mcbrellneri ATCC 49030]
gi|294971321|gb|EFG47208.1| di-trans,poly-cis-decaprenylcistransferase [Brevibacterium
mcbrellneri ATCC 49030]
Length = 257
Score = 242 bits (619), Expect = 3e-62, Method: Composition-based stats.
Identities = 81/237 (34%), Positives = 124/237 (52%), Gaps = 8/237 (3%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S P H+G+I DGN RWA G GHR G + E + E+GI+ +T++ S
Sbjct: 24 SDRIPRHVGVITDGNRRWAKEFGATTEQGHRAGAQKIVEFLGWCDEIGIEVVTLYVLSRE 83
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
N +R E+ LV +I +++ S V ++G+ L + + L+ A++++R
Sbjct: 84 NLQRTPEEVETLVAIISDMVEQIAQSDTYA---VNLVGDLSVLPEPLRARLENAQERSRG 140
Query: 127 NT-GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSDVPD 181
+++ +A Y R EI AIK+ + + D + +A++L T PD
Sbjct: 141 GQPSVHVNVAVGYGGRQEIVNAIKSYLRAESAAGTSMEDAINALTEERLAEHLYTKGQPD 200
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PDLIIR+ GE+RLS FL+WQ AYSEF F YWP F + F A+ Y+ R RR+G
Sbjct: 201 PDLIIRSSGEQRLSGFLIWQSAYSEFFFCEAYWPAFRKTDFLRAVRDYSQRQRRYGK 257
>gi|70606556|ref|YP_255426.1| undecaprenyl pyrophosphate synthetase [Sulfolobus acidocaldarius
DSM 639]
gi|41018481|sp|Q9HH76|UPPS_SULAC RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|9988414|dbj|BAB12723.1| cis-polyprenyl diphosphate synthase [Sulfolobus acidocaldarius]
gi|68567204|gb|AAY80133.1| undecaprenyl pyrophosphate synthetase [Sulfolobus acidocaldarius
DSM 639]
Length = 262
Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats.
Identities = 82/241 (34%), Positives = 124/241 (51%), Gaps = 3/241 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + P H+GII DGN RWA LP G+ G +++ E+GI +T+
Sbjct: 22 LWSQIKDGPFPFHVGIIPDGNRRWARNNRLPLDQGYYTGYVKLRDVLTWILEIGISTVTV 81
Query: 61 FAFSINNW-RRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVL 117
FA S N +R E+S + K +K L + + K ++V+ IG L +D+ ++
Sbjct: 82 FALSAENCEKRTQQELSMIFKYLKIGLDELLTSDLVHKYQVRVKAIGMLDKLPEDLKKLV 141
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+ E T L +A Y R EI AI+ I D + G + S +D S KYL
Sbjct: 142 VDLESTTEKYNKKKLILAICYGGRQEILDAIRKIMNDYKLGIIDSKSIDESTFRKYLYDQ 201
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
++ D DL+IR+ GE R+S+FLLW +AYSE F+ YWPDF + + A+ + R R FG
Sbjct: 202 ELSDIDLLIRSSGEIRISNFLLWHLAYSELFFVDVYWPDFRKIDLWRAIRSFQKRKRNFG 261
Query: 238 G 238
Sbjct: 262 A 262
>gi|118602086|ref|YP_903301.1| undecaprenyl pyrophosphate synthetase [Candidatus Ruthia magnifica
str. Cm (Calyptogena magnifica)]
gi|118567025|gb|ABL01830.1| Undecaprenyl pyrophosphate synthetase [Candidatus Ruthia magnifica
str. Cm (Calyptogena magnifica)]
Length = 248
Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats.
Identities = 86/215 (40%), Positives = 124/215 (57%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
HI IIMDGNGRWA+ LPR GH++GI+ + +V A GIK LT+FAFS N R
Sbjct: 15 KHIAIIMDGNGRWASKHSLPRILGHQQGIKAVHGVVKACVIRGIKTLTLFAFSSENKNRS 74
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E+S L KL LK+ L ++NI++++IG+ I +A+ N GL
Sbjct: 75 TEEVSLLFKLFLGVLKQEVKKLNEHNIRLKIIGDMSLFPAKIQQTALDAQALLASNIGLT 134
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L IA NY + +I++A I + G + + +++ ++YL +D P+ DL+IRT GE
Sbjct: 135 LVIAANYGGQWDIAQAAAKIAKAAIDGDIKASNINIDSFSQYLSLADEPNVDLLIRTSGE 194
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHAL 226
R+S+FLLW +AYSEF F WPDF+ A+
Sbjct: 195 LRISNFLLWDIAYSEFYFTETLWPDFNEFELNKAI 229
>gi|307328364|ref|ZP_07607540.1| undecaprenyl diphosphate synthase [Streptomyces violaceusniger Tu
4113]
gi|306885937|gb|EFN16947.1| undecaprenyl diphosphate synthase [Streptomyces violaceusniger Tu
4113]
Length = 272
Score = 242 bits (617), Expect = 4e-62, Method: Composition-based stats.
Identities = 86/232 (37%), Positives = 132/232 (56%), Gaps = 1/232 (0%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S P H+ IIMDGNGRWAA RGL R GH+ G+ +V A E GI++L++F FS
Sbjct: 37 SPGRPRHLAIIMDGNGRWAALRGLSRTRGHQAGVLALPRVVDTALEEGIEHLSLFFFSTE 96
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP +E++ L++L L F + +++R +G+ L L L+ AE T
Sbjct: 97 NWNRPRAEVAALMRLTAQ-LADVFRGYGERGVRLRWLGSEARLPRATLAALRRAEADTCD 155
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N + L FN+ R+EI+ + + G++ +D +L ++L +D+PD D+++
Sbjct: 156 NGAMTLAFCFNHGGREEIAHVATRLARASADGALDPGLIDEALFTRHLPHADLPDIDMLV 215
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
RT GE+R+S+F+LW+ AY+E F+ WPDF+ E L + R RRFG
Sbjct: 216 RTSGEQRISNFMLWRAAYAELFFVDTLWPDFTGEELRALLAAFASRKRRFGA 267
>gi|259506987|ref|ZP_05749887.1| undecaprenyl diphosphate synthase [Corynebacterium efficiens
YS-314]
gi|259165439|gb|EEW49993.1| undecaprenyl diphosphate synthase [Corynebacterium efficiens
YS-314]
Length = 269
Score = 242 bits (617), Expect = 4e-62, Method: Composition-based stats.
Identities = 84/243 (34%), Positives = 127/243 (52%), Gaps = 7/243 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGL-PRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
++ + + P H+ I+ DGN RWA G GHR G + E+V +V + +T
Sbjct: 29 LLKELNGARQPGHVAIMCDGNRRWAREAGFVDLSHGHRVGAKKIGELVRWCDDVDVDLVT 88
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++ S N R +E+ L +I + + SL + N +VR++G+ L + L+
Sbjct: 89 VYLLSTENLGRDEAELQLLYDIIGDVVAEL--SLPETNCRVRLVGHLDLLPKEFAERLRG 146
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIF----QDIESGSVCSHDVDSSLIAKYLD 175
+T +TG+ + IA Y R EI A++++ + ++ VD+ I+ +L
Sbjct: 147 TVCETVDHTGVAVNIAVGYGGRQEIVDAVRDLLTSARDEGKTLDEVIESVDAQAISTHLY 206
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
TS PDPDL+IRT GE+RLS F+LWQ AYSE F YWP F R F AL Y+ R RR
Sbjct: 207 TSGQPDPDLVIRTSGEQRLSGFMLWQSAYSEIWFTDTYWPAFRRIDFLRALRDYSQRSRR 266
Query: 236 FGG 238
FG
Sbjct: 267 FGK 269
>gi|219683309|ref|YP_002469692.1| undecaprenyl pyrophosphate synthase [Bifidobacterium animalis
subsp. lactis AD011]
gi|241191270|ref|YP_002968664.1| undecaprenyl pyrophosphate synthase [Bifidobacterium animalis
subsp. lactis Bl-04]
gi|241196676|ref|YP_002970231.1| undecaprenyl pyrophosphate synthase [Bifidobacterium animalis
subsp. lactis DSM 10140]
gi|219620959|gb|ACL29116.1| di-trans,poly-cis-decaprenylcistransferase [Bifidobacterium
animalis subsp. lactis AD011]
gi|240249662|gb|ACS46602.1| undecaprenyl pyrophosphate synthetase [Bifidobacterium animalis
subsp. lactis Bl-04]
gi|240251230|gb|ACS48169.1| undecaprenyl pyrophosphate synthetase [Bifidobacterium animalis
subsp. lactis DSM 10140]
gi|289177385|gb|ADC84631.1| Omega-trans-poly-cis-decaprenyl diphosphate synthase
[Bifidobacterium animalis subsp. lactis BB-12]
gi|295794263|gb|ADG33798.1| undecaprenyl pyrophosphate synthetase [Bifidobacterium animalis
subsp. lactis V9]
Length = 263
Score = 242 bits (617), Expect = 4e-62, Method: Composition-based stats.
Identities = 84/241 (34%), Positives = 140/241 (58%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + P H+G+IMDGNGRWA RGL R GH+ V + +A A E G++ L++
Sbjct: 23 IIPDFPKNKVPRHVGVIMDGNGRWAQQRGLIRTDGHQAAEPVVFDTIAGAIEAGVRYLSL 82
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW+R E+ L+ + + + + + ++VR G R L ++ L+ A
Sbjct: 83 YTFSTENWKRSPQEVRFLMGFSRDIIHRRVAQMDEWGVRVRWSGRRPKLWKSVIDELEVA 142
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
++T+ N +++ NY R EI+ A I +++ G + V +I+++L D+P
Sbjct: 143 MERTKRNKVIDVVFCINYGGRAEIADAAAAIAREVRDGRIKGDRVTEKMISEHLYNPDIP 202
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
D DL+IRT GE+R S+FL W+ AY+E F+PE +PD R + + ++++Y RDRRFGG+
Sbjct: 203 DCDLVIRTSGEQRTSNFLPWEAAYAELDFVPELFPDCGRVVLWGSIDRYIHRDRRFGGVK 262
Query: 241 K 241
K
Sbjct: 263 K 263
>gi|240256454|ref|NP_568884.4| dehydrodolichyl diphosphate synthase [Arabidopsis thaliana]
gi|83305680|sp|Q570Q8|DDPS5_ARATH RecName: Full=Dehydrodolichyl diphosphate synthase 5;
Short=Dedol-PP synthase 5
gi|8843800|dbj|BAA97348.1| cis-prenyltransferase homolog-like; undecaprenyl phosphate
synthetase-like [Arabidopsis thaliana]
gi|332009716|gb|AED97099.1| dehydrodolichyl diphosphate synthase 5 [Arabidopsis thaliana]
Length = 302
Score = 242 bits (617), Expect = 4e-62, Method: Composition-based stats.
Identities = 85/222 (38%), Positives = 125/222 (56%), Gaps = 2/222 (0%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ +I+DGN RWA RGL GH G E +G +++FAFS NW
Sbjct: 70 MPKHVAVILDGNRRWAEKRGLGTSEGHEAGARRLMENAKDCFAMGTNTISLFAFSTENWE 129
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+ L+ L + +L L+ + IK+ VIGNR L + +L +++E E+ T+ G
Sbjct: 130 RPEDEVKCLMALFEKYLASDMPYLRSDKIKISVIGNRTKLPESLLGLIEEVEEATKSYEG 189
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT--SDVPDPDLIIR 187
NL IA +YS R +I +A K++ ++ G + D++ + K L T S+ P+PDL+IR
Sbjct: 190 KNLIIAIDYSGRYDILQACKSLANKVKDGLIQVEDINEKAMEKELLTKCSEFPNPDLLIR 249
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQY 229
T GE+R+S+F LWQ AY+E F WPDF + AL Y
Sbjct: 250 TSGEQRISNFFLWQSAYTELYFPTVLWPDFGEAEYLEALTWY 291
>gi|296128803|ref|YP_003636053.1| undecaprenyl diphosphate synthase [Cellulomonas flavigena DSM
20109]
gi|296020618|gb|ADG73854.1| undecaprenyl diphosphate synthase [Cellulomonas flavigena DSM
20109]
Length = 253
Score = 242 bits (617), Expect = 4e-62, Method: Composition-based stats.
Identities = 82/242 (33%), Positives = 128/242 (52%), Gaps = 7/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ S+ P HIG+I+DGN RWA GL GHR+G + ++++ + +VG++ +T+
Sbjct: 15 LAGSLEPDQVPRHIGVILDGNRRWARDSGLSSATGHRRGADKISDLLQWSEDVGVEVVTL 74
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N R E+ +L+ +I+ + + + +++ +G L D LK A
Sbjct: 75 WMLSTDNLARDPEELEQLLGVIEDVVGEL---AAERRWRIQAVGALDMLPDCTAAALKAA 131
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLDT 176
+D T GL++ A Y R EI+ A++ + ++ D IA++L T
Sbjct: 132 QDATADVQGLHVNAAVGYGGRREIADAVRAFLRMHAEAGSSLDELAEAFDVEHIAEHLYT 191
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
PDPDL+IRT GE+RL FLLWQ +SEF F YWPDF R F A+ Y R+RR
Sbjct: 192 KGQPDPDLVIRTSGEQRLGGFLLWQSTHSEFYFCDAYWPDFRRVDFLRAVRAYGQRERRL 251
Query: 237 GG 238
G
Sbjct: 252 GR 253
>gi|183602376|ref|ZP_02963742.1| undecaprenyl pyrophosphate synthetase [Bifidobacterium animalis
subsp. lactis HN019]
gi|183218295|gb|EDT88940.1| undecaprenyl pyrophosphate synthetase [Bifidobacterium animalis
subsp. lactis HN019]
Length = 258
Score = 242 bits (617), Expect = 5e-62, Method: Composition-based stats.
Identities = 84/241 (34%), Positives = 140/241 (58%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + P H+G+IMDGNGRWA RGL R GH+ V + +A A E G++ L++
Sbjct: 18 IIPDFPKNKVPRHVGVIMDGNGRWAQQRGLIRTDGHQAAEPVVFDTIAGAIEAGVRYLSL 77
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ FS NW+R E+ L+ + + + + + ++VR G R L ++ L+ A
Sbjct: 78 YTFSTENWKRSPQEVRFLMGFSRDIIHRRVAQMDEWGVRVRWSGRRPKLWKSVIDELEVA 137
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
++T+ N +++ NY R EI+ A I +++ G + V +I+++L D+P
Sbjct: 138 MERTKRNKVIDVVFCINYGGRAEIADAAAAIAREVRDGRIKGDRVTEKMISEHLYNPDIP 197
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
D DL+IRT GE+R S+FL W+ AY+E F+PE +PD R + + ++++Y RDRRFGG+
Sbjct: 198 DCDLVIRTSGEQRTSNFLPWEAAYAELDFVPELFPDCGRVVLWGSIDRYIHRDRRFGGVK 257
Query: 241 K 241
K
Sbjct: 258 K 258
>gi|167009897|ref|ZP_02274828.1| di-trans,poly-cis-decaprenylcistransferase [Francisella tularensis
subsp. holarctica FSC200]
Length = 225
Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats.
Identities = 90/225 (40%), Positives = 135/225 (60%), Gaps = 1/225 (0%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA +R PR GHR + + + E I+ LT+FAF +NW RP E+S+
Sbjct: 1 MDGNGRWAKSRLKPRIFGHRNSVSSVDATIEYCVENNIEMLTLFAFGRDNWLRPAQEVSD 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ L LK L NNI V V+G+R L + ++ +++ +E T+ NTGL L +A +
Sbjct: 61 LMDLFYKTLKDKTPKLHDNNIVVTVVGDRSRLSNKLIGMIEYSESLTKSNTGLKLRLAVD 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y+ R +I A + I ++++ G + ++D + AKYL ++P DL+IRT GE RLSDF
Sbjct: 121 YAGRWDIVEATRAIAREVDIGKLSVDEIDQNSFAKYLVGGNMP-VDLLIRTSGEVRLSDF 179
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+LWQ+AY+E F WPDFS++ A+ + R RRFG ++
Sbjct: 180 MLWQLAYAEMYFTDIMWPDFSKQELTRAVEYFYSRQRRFGKSGEQ 224
>gi|319786510|ref|YP_004145985.1| undecaprenyl diphosphate synthase [Pseudoxanthomonas suwonensis
11-1]
gi|317465022|gb|ADV26754.1| undecaprenyl diphosphate synthase [Pseudoxanthomonas suwonensis
11-1]
Length = 232
Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats.
Identities = 87/225 (38%), Positives = 130/225 (57%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA R PR GHR G + GI LT+FAFS NW RP E++
Sbjct: 1 MDGNGRWAQRRRRPRVVGHRAGARAAERTIDFCLAHGIDALTLFAFSSENWGRPEEEVNA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+KL L++ +L K +++R IG+R I + AE QT N+ L L +A +
Sbjct: 61 LMKLFLGALEREVGALDKRGVRLRFIGDRERFAPKIRERMAAAEAQTAGNSRLELAVAAS 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I+ A + + +++ +G + +D + ++ ++ SD+P PDL IRTGG+ R+S+F
Sbjct: 121 YGGRQDIAVAARALAREVAAGRLDPEQIDEAAMSAHVALSDLPPPDLFIRTGGDHRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
LLWQ+AY+E F WPD ++ HAL+ + R+RRFG S +
Sbjct: 181 LLWQLAYTELWFTDTLWPDVDAKVLQHALDDFGRRERRFGLTSAQ 225
>gi|332671442|ref|YP_004454450.1| undecaprenyl diphosphate synthase [Cellulomonas fimi ATCC 484]
gi|332340480|gb|AEE47063.1| undecaprenyl diphosphate synthase [Cellulomonas fimi ATCC 484]
Length = 253
Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats.
Identities = 82/242 (33%), Positives = 129/242 (53%), Gaps = 7/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ AS+ P H+G+I+DGN RWA + G GH+ G + E++ + +VG++ +T+
Sbjct: 15 LAASLPRDRVPRHVGVILDGNRRWARSMGESTAHGHQAGADKIAELLGWSEDVGVEVVTL 74
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N RP E+ L+ +I+ ++ S +++ +G+ L L EA
Sbjct: 75 WMLSTDNLNRPAEELDPLLAIIEHAVRDLAES---GRWRLQAVGSLHLLPPQTAAALHEA 131
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVC----SHDVDSSLIAKYLDT 176
E+ T TGL++ +A Y R EI+ A+++ ++ + D IA+ L T
Sbjct: 132 EEATADVTGLHVNVAVGYGGRHEIADAVRSFLREHAQTGTSVDELAEQFDVEHIAERLYT 191
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
PDPDL+IRT GE+RL FLLWQ +SEF F YWPDF R F A+ + R+RR
Sbjct: 192 KGQPDPDLVIRTSGEQRLGGFLLWQSVHSEFYFCEAYWPDFRRVDFLRAVRSFAARERRL 251
Query: 237 GG 238
G
Sbjct: 252 GR 253
>gi|195394061|ref|XP_002055664.1| GJ19485 [Drosophila virilis]
gi|194150174|gb|EDW65865.1| GJ19485 [Drosophila virilis]
Length = 303
Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats.
Identities = 81/234 (34%), Positives = 127/234 (54%), Gaps = 6/234 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+S P HI +MDGN R+A ++ L + GH +G +++ ++GI+ +T FAFSI
Sbjct: 22 LSGHIPHHIAFVMDGNRRFARSKQLDKIEGHSRGFSKLADVLRWCLDMGIREVTTFAFSI 81
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
N++R E+ L L + K L ++ I++RVIGN L L D+ ++ A
Sbjct: 82 ENFKRSNEEVEGLFNLARDKFSKLLEETSRLDEHGIRIRVIGNLLLLPADLQRLIATAML 141
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSV--CSHDVDSSLIAKYLDTSDVP 180
+T N L L +AF Y+SRDEI++A++ + ++ E D++ L+ L T P
Sbjct: 142 RTERNDKLFLNVAFAYTSRDEITQAVEAVLREDEQADDPLQPTDINERLLEACLYTRHSP 201
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
PDL+ RT GE RLSDF++WQ++ S F WP + F ++ Y RDR
Sbjct: 202 PPDLVFRTSGETRLSDFMMWQLSTSVLYFTDVLWPQITIWNFLASIVAYQ-RDR 254
>gi|331694815|ref|YP_004331054.1| Undecaprenyl pyrophosphate synthase [Pseudonocardia dioxanivorans
CB1190]
gi|326949504|gb|AEA23201.1| Undecaprenyl pyrophosphate synthase [Pseudonocardia dioxanivorans
CB1190]
Length = 255
Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats.
Identities = 83/242 (34%), Positives = 125/242 (51%), Gaps = 7/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGL-PRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ + ++ P H+ +++DGN RWA GL GHR G +++ E ++ +T
Sbjct: 15 LTRRLETAERPRHVALMLDGNRRWARDAGLVDVNDGHRVGAAKIGDLLEWCREADVEVVT 74
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
+F S +N R E+ L+++I + + + ++RV+G L ++I L
Sbjct: 75 LFLLSTDNLTRAADELEPLLEIIADVVDEL--AGPGRPWQLRVVGALELLPEEIASRLSA 132
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLD 175
A +T +GL + +A Y R EI+ A++ + ++ D IA +L
Sbjct: 133 ATSRTVGRSGLQVNVAVGYGGRQEIADAVRKLLLQHAESGTSIEELADVLDVDHIAAHLY 192
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
TS PDPDLIIRT GE+RLS FLLWQ A+SEF F YWP+F R F AL Y R RR
Sbjct: 193 TSGQPDPDLIIRTSGEQRLSGFLLWQSAHSEFWFCEAYWPEFRRVDFLRALRDYAARHRR 252
Query: 236 FG 237
FG
Sbjct: 253 FG 254
>gi|121608414|ref|YP_996221.1| undecaprenyl diphosphate synthase [Verminephrobacter eiseniae
EF01-2]
gi|121553054|gb|ABM57203.1| Undecaprenyl pyrophosphate synthetase [Verminephrobacter eiseniae
EF01-2]
Length = 243
Score = 241 bits (616), Expect = 6e-62, Method: Composition-based stats.
Identities = 92/233 (39%), Positives = 127/233 (54%), Gaps = 7/233 (3%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI I+MDGNGRWA R LPR AGH++G+E A + G+ LT+FAFS NW
Sbjct: 7 VPHHIAIVMDGNGRWATRRLLPRLAGHQQGVEALRRCARACVQRGVAVLTVFAFSSENWN 66
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP E+S L++L+ L + L+K+ +++ +G R L + L +AE T N
Sbjct: 67 RPADEVSGLLELLALALAREVPQLQKDGVRLYFVGARADLAPKVRADLAQAEAATAANAR 126
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L + FNY R +I Q + + + + + L + VPDPDL+IRTG
Sbjct: 127 LVLNVCFNYGGRWDI-------AQAAAALAARGEPITEASLHGALGLAHVPDPDLLIRTG 179
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GE R+S+FLLWQ AYSE F WPDF A+ + R+RRFG S +
Sbjct: 180 GEMRISNFLLWQAAYSELFFSDRLWPDFDESALDGAIAAFCGRERRFGKTSAQ 232
>gi|302865360|ref|YP_003833997.1| undecaprenyl diphosphate synthase [Micromonospora aurantiaca ATCC
27029]
gi|315501904|ref|YP_004080791.1| undecaprenyl diphosphate synthase [Micromonospora sp. L5]
gi|302568219|gb|ADL44421.1| undecaprenyl diphosphate synthase [Micromonospora aurantiaca ATCC
27029]
gi|315408523|gb|ADU06640.1| undecaprenyl diphosphate synthase [Micromonospora sp. L5]
Length = 256
Score = 241 bits (616), Expect = 6e-62, Method: Composition-based stats.
Identities = 82/243 (33%), Positives = 127/243 (52%), Gaps = 8/243 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGL-PRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ A + P H+G++ DGN RWA G GHR G E E++ G+ ++T
Sbjct: 15 LTAKLAGKPVPAHVGVMCDGNRRWAREMGFVDPNDGHRMGAERIKELLRWCDAAGVGHVT 74
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++ S +N RP +E+ L+++I+ + ++R++G L LK
Sbjct: 75 LWLLSTDNLSRPAAELDPLLQIIEDLTTELAEEGNP--WRLRMVGALDVLPAQHAAALKA 132
Query: 120 AEDQTRLNTGL-NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYL 174
AE++TR G + IA Y R EI+ A++++ + + + ++ I+++L
Sbjct: 133 AEERTRDRDGGAQVNIAVGYGGRREIADAVRSLLVEHAANGGTIEELATSINVDHISEHL 192
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
T +PDPDLIIRT GE+RLS F+LWQ A+SEF F WPDF + F AL Y R R
Sbjct: 193 YTKGLPDPDLIIRTSGEQRLSGFMLWQSAHSEFYFCELNWPDFRKVDFLRALRSYATRQR 252
Query: 235 RFG 237
RFG
Sbjct: 253 RFG 255
>gi|223944707|gb|ACN26437.1| unknown [Zea mays]
gi|238009764|gb|ACR35917.1| unknown [Zea mays]
Length = 412
Score = 241 bits (615), Expect = 6e-62, Method: Composition-based stats.
Identities = 74/249 (29%), Positives = 121/249 (48%), Gaps = 18/249 (7%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++AS+ P HI IMDGN R+A R + AGHR G + E+G+K +T+
Sbjct: 148 LIASLSYGPMPKHIAFIMDGNRRYAKFRSMQEGAGHRMGFSTLIASLMYCYEMGVKYITV 207
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI+N++R SE+ L++L++ + + + + K K+ GN L + +
Sbjct: 208 YAFSIDNFKRDPSEVESLMQLMEEKINELLENQSVINKIKCKINFWGNLDLLYEPVRLAA 267
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSH-------------- 163
++ T NTGL I Y+S EI A+ + + H
Sbjct: 268 EKLMASTAGNTGLVFSICMPYNSTSEIVNAVSEVCAERMEMFQSEHIGDCNGHAANNGVR 327
Query: 164 -DVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELF 222
++ + + +++ ++ PDPD++IRT GE RLS+FLLWQ +S WP+FS
Sbjct: 328 SEISVAELDRHMYSAGCPDPDIVIRTSGETRLSNFLLWQTTFSHLQNPDPLWPEFSFRHL 387
Query: 223 FHALNQYNL 231
A+ QY
Sbjct: 388 VWAILQYQR 396
>gi|42559990|sp|Q8FQR4|UPPS1_COREF RecName: Full=Undecaprenyl pyrophosphate synthase 1; Short=UPP
synthase 1; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase 1;
AltName: Full=Undecaprenyl diphosphate synthase 1;
Short=UDS 1
Length = 256
Score = 241 bits (615), Expect = 7e-62, Method: Composition-based stats.
Identities = 84/243 (34%), Positives = 127/243 (52%), Gaps = 7/243 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGL-PRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
++ + + P H+ I+ DGN RWA G GHR G + E+V +V + +T
Sbjct: 16 LLKELNGARQPGHVAIMCDGNRRWAREAGFVDLSHGHRVGAKKIGELVRWCDDVDVDLVT 75
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++ S N R +E+ L +I + + SL + N +VR++G+ L + L+
Sbjct: 76 VYLLSTENLGRDEAELQLLYDIIGDVVAEL--SLPETNCRVRLVGHLDLLPKEFAERLRG 133
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIF----QDIESGSVCSHDVDSSLIAKYLD 175
+T +TG+ + IA Y R EI A++++ + ++ VD+ I+ +L
Sbjct: 134 TVCETVDHTGVAVNIAVGYGGRQEIVDAVRDLLTSARDEGKTLDEVIESVDAQAISTHLY 193
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
TS PDPDL+IRT GE+RLS F+LWQ AYSE F YWP F R F AL Y+ R RR
Sbjct: 194 TSGQPDPDLVIRTSGEQRLSGFMLWQSAYSEIWFTDTYWPAFRRIDFLRALRDYSQRSRR 253
Query: 236 FGG 238
FG
Sbjct: 254 FGK 256
>gi|148259002|ref|YP_001243587.1| undecaprenyl pyrophosphate synthase [Bradyrhizobium sp. BTAi1]
gi|146411175|gb|ABQ39681.1| Undecaprenyl pyrophosphate synthetase [Bradyrhizobium sp. BTAi1]
Length = 247
Score = 241 bits (615), Expect = 7e-62, Method: Composition-based stats.
Identities = 98/229 (42%), Positives = 131/229 (57%), Gaps = 11/229 (4%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+GIIMDGNGRWA +GL R GH G+E +V AA + G+ LT++AFS +NWRRP
Sbjct: 17 HVGIIMDGNGRWATRQGLSRLRGHEAGVEAIRRVVEAAPDQGVGTLTLYAFSSDNWRRPR 76
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+E+ L+ L++ +L SL +N +++ VIG R L I + AE TR T L+L
Sbjct: 77 TEVMGLMALLRVYLASEVESLVRNGVRLSVIGRRDRLPGGIADAIGRAEAATRDGTTLHL 136
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT--SDVPDPDLIIRTGG 190
IA +YS+RD I A + + + L T + + D DLIIRT G
Sbjct: 137 RIAVDYSARDAILHAAAK--------ARDVDALTREAFSD-LVTGEAGLRDVDLIIRTSG 187
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
E+RLSDFLLW+ AY+E F WPDF E AL + R+RRFGGL
Sbjct: 188 EQRLSDFLLWEGAYAELHFTQRMWPDFDAEDLAQALTSFRGRERRFGGL 236
>gi|222474825|ref|YP_002563240.1| undecaprenyl diphosphate synthase (uppS) [Anaplasma marginale str.
Florida]
gi|254994685|ref|ZP_05276875.1| undecaprenyl diphosphate synthase (uppS) [Anaplasma marginale str.
Mississippi]
gi|255002797|ref|ZP_05277761.1| undecaprenyl diphosphate synthase (uppS) [Anaplasma marginale str.
Puerto Rico]
gi|255003931|ref|ZP_05278732.1| undecaprenyl diphosphate synthase (uppS) [Anaplasma marginale str.
Virginia]
gi|222418961|gb|ACM48984.1| undecaprenyl diphosphate synthase (uppS) [Anaplasma marginale str.
Florida]
Length = 236
Score = 241 bits (615), Expect = 7e-62, Method: Composition-based stats.
Identities = 82/238 (34%), Positives = 135/238 (56%), Gaps = 8/238 (3%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
S M+ P H+ +IMDGNGRWA +RGLP+ + +G+ ++V A I++LT++A
Sbjct: 5 MSAMAHKLPKHVAVIMDGNGRWAKSRGLPKIEAYTQGMLAAKKVVEACVHHAIRHLTLYA 64
Query: 63 FSINNWRRPVSEISELVKLIKSFLK--KGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FS+ NW R E+S+++ L ++L + + + +R +G+ L D++ + +
Sbjct: 65 FSLENWLRSTEEVSDIMSLFTNYLSSPELRKLSDDHGVSIRFVGDLKLLRADLVERMSDI 124
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ TR N L L +A +Y ++ +I +A+ VD + ++ T D+P
Sbjct: 125 QSVTRNNDALYLNVAVSYGAKQDIIQAVNAAL------DSGVESVDGETLRSFMWTKDLP 178
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
D DL+IR GGEKR+S+FLLWQ+AY+E F WPDF+ F AL+ Y R+R++G
Sbjct: 179 DVDLLIRAGGEKRISNFLLWQLAYAELYFCDIMWPDFTAAHFSDALDSYLARNRKYGR 236
>gi|229820259|ref|YP_002881785.1| undecaprenyl diphosphate synthase [Beutenbergia cavernae DSM 12333]
gi|229566172|gb|ACQ80023.1| undecaprenyl diphosphate synthase [Beutenbergia cavernae DSM 12333]
Length = 228
Score = 240 bits (614), Expect = 8e-62, Method: Composition-based stats.
Identities = 90/221 (40%), Positives = 133/221 (60%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA ARGLPR GH G V ++VA A E+GI +++ +AFS NW+R +E+
Sbjct: 1 MDGNGRWANARGLPRTEGHAAGEAVLLDVVAGAIELGITHVSAYAFSTENWKRSPAEVRW 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ + L++ + ++VR G R L ++ L+EAE TR N L + N
Sbjct: 61 LMGFNRDVLRRRRDEMSSWGVRVRWAGRRPRLWRSVIAELEEAERVTRDNALCTLTMCVN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R EI+ A + I +++ +G + + +A++LD D+PD DL +RTGGE+R S+F
Sbjct: 121 YGGRAEIADATRAIAREVAAGRLDPERITERTLARHLDEPDMPDVDLFLRTGGEQRASNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L+WQ AY+E VF+ + WPD R + A +Y RDRR+GG
Sbjct: 181 LIWQSAYAEMVFLDKPWPDVDRRDLWAAALEYARRDRRYGG 221
>gi|327400042|ref|YP_004340881.1| Undecaprenyl pyrophosphate synthase [Archaeoglobus veneficus SNP6]
gi|327315550|gb|AEA46166.1| Undecaprenyl pyrophosphate synthase [Archaeoglobus veneficus SNP6]
Length = 263
Score = 240 bits (614), Expect = 9e-62, Method: Composition-based stats.
Identities = 85/236 (36%), Positives = 127/236 (53%), Gaps = 3/236 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + P+H+ IIMDGN R+A RGLP AGH G E++ E+GIKN+T+
Sbjct: 13 LIKEIKPFGMPNHVAIIMDGNRRFARRRGLPPQAGHVFGSRKAEEVLNWCWELGIKNVTV 72
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFY--SLKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFS N+ R E + KL+ L++ + +N +KV+VIG L + + ++
Sbjct: 73 YAFSTENFNRSEEEKQNIFKLVAKELRRLAKDRRIHRNRVKVKVIGKLEMLPEYVREAIR 132
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD-TS 177
E E T+ NL IA Y R E+ AI+ + D+ G + S D+D+ + KYL
Sbjct: 133 EVEKATQGYGNFNLNIALAYGGRQELIDAIRGVLHDVRRGVLRSRDIDAKTLEKYLYGEG 192
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
D DL+IRTGGE+RLS+FL WQ A S F YWP+F + A+ + +
Sbjct: 193 DYASVDLVIRTGGEQRLSNFLPWQTANSVAYFCDAYWPEFRKIDLLRAIRAWQQKK 248
>gi|78777195|ref|YP_393510.1| di-trans-poly-cis-decaprenylcistransferase [Sulfurimonas
denitrificans DSM 1251]
gi|78497735|gb|ABB44275.1| Undecaprenyl pyrophosphate synthetase [Sulfurimonas denitrificans
DSM 1251]
Length = 225
Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats.
Identities = 89/230 (38%), Positives = 125/230 (54%), Gaps = 10/230 (4%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVG-IKNLTIFAFSINNWRR 70
HI IIMDGNGRWA RG R GH G +V + A+ I+ LT++AFS NW+R
Sbjct: 5 KHIAIIMDGNGRWAELRGKKRVKGHEAGAKVARAVTEFCAKHKEIQRLTLYAFSTENWKR 64
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E+ L+KL++ +L + KNNI+ IG+ + + +++ E+++ GL
Sbjct: 65 PKLEVEFLMKLLEKYLNSELETYLKNNIRFEPIGDISAFSSSLQKTIRDVEEKSAHCDGL 124
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY + DEI RAI D+ +++ LD D + DL+IRTGG
Sbjct: 125 VQSLALNYGAHDEILRAINR-------VKKRDDDITEAMLLDALDCKD--NVDLLIRTGG 175
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
+ RLS+FLLWQ AY+E F WPDFS LN + +RRFGGL
Sbjct: 176 DHRLSNFLLWQSAYAELFFTDTLWPDFSVNELEKTLNDFTKIERRFGGLK 225
>gi|269123369|ref|YP_003305946.1| undecaprenyl diphosphate synthase [Streptobacillus moniliformis DSM
12112]
gi|268314695|gb|ACZ01069.1| undecaprenyl diphosphate synthase [Streptobacillus moniliformis DSM
12112]
Length = 244
Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats.
Identities = 90/230 (39%), Positives = 130/230 (56%), Gaps = 7/230 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HIGIIMDGNGRWA R L R GH+ G EI+ ++ IK LT++AFS NW+R
Sbjct: 21 PKHIGIIMDGNGRWAKQRNLARTEGHKAGANKLEEIIECIMDLDIKYLTVYAFSTENWKR 80
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
P E++ ++KL +LK K I+V + G+R +L ++ ++ E+ T+ N L
Sbjct: 81 PKLEVTAIMKLFTKYLKINEEKFMKEKIRVCISGSRSNLSSSLIKQIEYIENLTKDNDKL 140
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L IAFNY R EI A+K + + + + S +PD DL+IRTG
Sbjct: 141 VLNIAFNYGGRLEIIDALKKVVAKNLEINENNISN-------NMYNSFIPDVDLVIRTGN 193
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
+ R+S+FLLWQ+AYSE WPDF++E ++ + R+RRFGG+
Sbjct: 194 DFRISNFLLWQIAYSEIYVSELLWPDFTKEELHKSIFSFINRERRFGGIK 243
>gi|258654533|ref|YP_003203689.1| undecaprenyl diphosphate synthase [Nakamurella multipartita DSM
44233]
gi|258557758|gb|ACV80700.1| undecaprenyl diphosphate synthase [Nakamurella multipartita DSM
44233]
Length = 255
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 84/242 (34%), Positives = 125/242 (51%), Gaps = 7/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLP-RCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ ++ + P H+G+++DGN RWA G GHR G +++ E GI +T
Sbjct: 15 LTRELIGAPIPHHVGVMLDGNRRWARKAGFTNPTEGHRAGAAHIVDLLEWCQESGIGMVT 74
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++ S +N RRP E+ L+++I ++ + K+R++G L + + L
Sbjct: 75 LWLLSTDNLRRPGQELQPLLEIITDVVEDL--AAPDRVWKLRIVGALDLLPEPMSARLTA 132
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLD 175
A +T L + IA Y R EI A+K++ + +V + I ++L
Sbjct: 133 AATRTEHRRALQVNIAVGYGGRQEIVDAVKSMLEAGIKQGHGIQEVIDSLNVETIGEHLY 192
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
TS PDPDL+IRT GE+RLS FLLWQ A+SEF F YWPDF R F AL Y R RR
Sbjct: 193 TSGQPDPDLVIRTSGEQRLSGFLLWQSAHSEFWFCEAYWPDFRRVDFLRALRDYAARHRR 252
Query: 236 FG 237
+G
Sbjct: 253 YG 254
>gi|327187688|dbj|BAK09179.1| Z-prenyltransferase 1 [Mycobacterium chlorophenolicum]
Length = 282
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 84/240 (35%), Positives = 123/240 (51%), Gaps = 8/240 (3%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
S S P HI ++ DGN RWA G A G+R G E++ A+ GI+ T++
Sbjct: 44 SRQKSELPRHIAVLCDGNRRWARELGHDDVAYGYRAGAHKIAEMLRWCADAGIEMATVYP 103
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
S N +R E++ L+++I +++ N VR +G+ + ++ L+EA
Sbjct: 104 LSTENLQRDPDELASLIEIITDVVEE--ICAPANQWSVRTVGDLELIGEEPARRLREAVQ 161
Query: 123 QTRLNTG-LNLFIAFNYSSRDEISRAIKNIFQDIESGSVC----SHDVDSSLIAKYLDTS 177
T N G ++ +A Y R EI A++ + + V + I++ L TS
Sbjct: 162 STDGNGGAFHVNVAVGYGGRQEIVDAVRALLSKELANGPTGDQLIEAVTAEAISENLYTS 221
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDPDL+IRT GE+RLS FLLWQ AYSE F YWP+F R F AL Y+ R RR+G
Sbjct: 222 GQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAYWPEFRRVDFLRALRDYSARHRRYG 281
>gi|166712736|ref|ZP_02243943.1| undecaprenyl pyrophosphate synthetase [Xanthomonas oryzae pv.
oryzicola BLS256]
Length = 236
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 88/225 (39%), Positives = 127/225 (56%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA R PR GHR G N + E G+ LT+FAFS NW RP E+
Sbjct: 1 MDGNGRWAQRRRRPRVIGHRAGARAVNRTIDFCLEKGVSALTLFAFSSENWGRPRDEVDA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+KL L + L++ ++VR IG+R + + AE T N L L IA +
Sbjct: 61 LMKLFLHALDREVGELQRRGVQVRFIGDRSRFAAPLRDRMAGAERSTAANARLVLSIAAS 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I+ A + + +D+ +G + +D +L++ + +D+P PDL IRTGG+ R+S+F
Sbjct: 121 YGGRQDIAAAARALAEDVAAGRLQPEQIDEALLSSRVALADLPAPDLFIRTGGDTRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
LLWQ+AY+E F WP+F + AL+ Y R+RRFG S +
Sbjct: 181 LLWQLAYTELWFTETLWPEFDAGVLQQALDDYAGRERRFGLTSAQ 225
>gi|320094365|ref|ZP_08026152.1| undecaprenyl diphosphate synthase [Actinomyces sp. oral taxon 178
str. F0338]
gi|319978698|gb|EFW10254.1| undecaprenyl diphosphate synthase [Actinomyces sp. oral taxon 178
str. F0338]
Length = 253
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 82/243 (33%), Positives = 129/243 (53%), Gaps = 9/243 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ A + ++ P HIG+I+DGN RWA + G P GHR G +E + A + G+ +T+
Sbjct: 15 LRAELATAPIPAHIGVILDGNRRWAKSLGAPASQGHRAGAGKISEFLGWANDAGVSIVTL 74
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNN-IKVRVIGNRLSLDDDILCVLKE 119
+ S +N R E+ EL+++ + + +L K ++ ++G+ L D + L
Sbjct: 75 WLLSTDNLSRDADELGELLRI----ICEAVEALAKQGAWRLAIVGDLSLLPDGVAADLSR 130
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVC----SHDVDSSLIAKYLD 175
+ + T G+ + IA Y R EI+ A++ + ++ + + IA +L
Sbjct: 131 SIEATAGREGMKVNIAVGYGGRHEITEAVRAMMREAAAAGRSLAEVAESFTDQDIASHLY 190
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
T D PDPDL+IRT GE+RLS F+LWQ +SE+ F YWPDF R F AL Y R+RR
Sbjct: 191 TKDQPDPDLVIRTSGEQRLSGFMLWQSVHSEYYFCEVYWPDFRRVDFLRALRSYAQRERR 250
Query: 236 FGG 238
G
Sbjct: 251 LGR 253
>gi|282850822|ref|ZP_06260196.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus gasseri
224-1]
gi|282557774|gb|EFB63362.1| di-trans,poly-cis-decaprenylcistransferase [Lactobacillus gasseri
224-1]
Length = 219
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 89/217 (41%), Positives = 132/217 (60%), Gaps = 3/217 (1%)
Query: 26 AARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSF 85
R LPR GHR G++ I AA E+GIK LT++AFS NW RP E++ L++L F
Sbjct: 3 KKRHLPRFVGHRHGMDNIRNIALAANEMGIKVLTLYAFSTENWARPTDEVNYLMRLPIDF 62
Query: 86 LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEIS 145
K L +NN++V ++G L + V ++A +T NTG+ L AFNY SR EI+
Sbjct: 63 FDKFMPELMENNVRVNIMGFLDELPEKTYLVTQKAMAETANNTGMVLNFAFNYGSRREIT 122
Query: 146 RAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP---DPDLIIRTGGEKRLSDFLLWQV 202
++ I + +++G + D+D +++ +L T + DPDL+IRT GE+RLS+FLLWQ+
Sbjct: 123 AGVQEIARQVKAGKINPSDIDEKMVSDHLLTHSLTPYDDPDLLIRTSGEERLSNFLLWQM 182
Query: 203 AYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
AY+EF F + WPDF + + + Y R+RRFG L
Sbjct: 183 AYTEFSFSNKLWPDFDKNDLENLVKDYYGRNRRFGKL 219
>gi|195604846|gb|ACG24253.1| dehydrodolichyl diphosphate synthase 6 [Zea mays]
gi|195625304|gb|ACG34482.1| dehydrodolichyl diphosphate synthase 6 [Zea mays]
Length = 303
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 74/249 (29%), Positives = 122/249 (48%), Gaps = 18/249 (7%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++A + P HI IMDGN R+A R + AGHR G + E+G+K +T+
Sbjct: 39 LIAILSYGPMPKHIAFIMDGNRRYAKFRSMQEGAGHRMGFSTLIASLMYCYEMGVKYITV 98
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI+N++R SE+ L++L++ + + + + K N K+ GN L + +
Sbjct: 99 YAFSIDNFKRDPSEVESLMQLMEEKINELLENQSVINKINCKINFWGNLDLLYEPVRLAA 158
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSH-------------- 163
++ T NTGL I Y+S EI A+ + + H
Sbjct: 159 EKLMASTAGNTGLVFSICMPYNSTSEIVNAVSQVCAERMEMFQSEHIGECNGHAANNGVR 218
Query: 164 -DVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELF 222
++ + + +++ +++ PDPD++IRT GE RLS+FLLWQ +S WP+FS
Sbjct: 219 SEISVADLDRHMYSAECPDPDIVIRTSGETRLSNFLLWQTTFSHLQNPDPLWPEFSFRHL 278
Query: 223 FHALNQYNL 231
A+ QY
Sbjct: 279 VWAILQYQR 287
>gi|317124136|ref|YP_004098248.1| undecaprenyl pyrophosphate synthetase [Intrasporangium calvum DSM
43043]
gi|315588224|gb|ADU47521.1| Undecaprenyl pyrophosphate synthetase [Intrasporangium calvum DSM
43043]
Length = 253
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 79/240 (32%), Positives = 125/240 (52%), Gaps = 7/240 (2%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + S P H+ +++DGN RWA ARG GH+ G + E++ E G++ +T++
Sbjct: 16 LKHLPRESLPRHVAVMLDGNRRWARARGAGTAHGHQAGADKIEELLQWCEEAGVEYVTLW 75
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
S +N +R +E++ L+K+I++ + ++R+ G L D L+ +
Sbjct: 76 LLSTDNLQRAEAELAPLLKIIENAV---ADLAATGRWRLRIAGAVDLLPPDTAESLQRSV 132
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVD----SSLIAKYLDTS 177
T +G+ + +A Y R EI+ A++++ + + D+ IA++L T
Sbjct: 133 AATEAVSGMTVNVAVAYGGRREIADAVRDMLLEHSARGESIEDIAARLRIEDIAEHLYTK 192
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDPDL+IRT GE+RL FLLWQ A SEF F YWPDF F AL Y R RR G
Sbjct: 193 GQPDPDLVIRTSGEQRLGGFLLWQSATSEFYFCEAYWPDFRHVDFLRALRAYAGRHRRHG 252
>gi|119952922|ref|YP_945131.1| undecaprenyl pyrophosphate synthase [Borrelia turicatae 91E135]
gi|119861693|gb|AAX17461.1| undecaprenyl pyrophosphate synthetase [Borrelia turicatae 91E135]
Length = 230
Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats.
Identities = 94/234 (40%), Positives = 136/234 (58%), Gaps = 4/234 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M ++S P H+GIIMDGN RWA RGL GH++G++ EIV + ++GIK L+++ FS
Sbjct: 1 MNNNSLPMHVGIIMDGNRRWALKRGLSLFEGHKEGLKRAKEIVKYSLKLGIKYLSLYVFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW R SEI L+ +I +L F NNIK+ V G +L ++ + +A D T
Sbjct: 61 TENWNRTKSEIKHLMFVIADYLSSEFEFYSTNNIKILVSGEIEALSKEVRKSIIDAIDFT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ GL L +A NY R+EI RA K I + +D + +K+LD ++ D DL
Sbjct: 121 KNFDGLVLNLAINYGGRNEIVRATKKIL----GSGLQCETLDEIVFSKFLDNPELCDLDL 176
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+IRTGG+ R+S+FLLW++AY EFVF WP++S + L + R R FG
Sbjct: 177 LIRTGGDMRISNFLLWRIAYCEFVFSSVLWPEYSVSHYDKDLECFKNRKRNFGR 230
>gi|149186827|ref|ZP_01865137.1| undecaprenyl diphosphate synthase [Erythrobacter sp. SD-21]
gi|148829494|gb|EDL47935.1| undecaprenyl diphosphate synthase [Erythrobacter sp. SD-21]
Length = 228
Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats.
Identities = 86/232 (37%), Positives = 129/232 (55%), Gaps = 9/232 (3%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
H+ +IMDGNGRWA + LPR GHRKG+E E+V + I+ LT++AFS
Sbjct: 5 QDKIARHVAVIMDGNGRWAKRKHLPRAMGHRKGVEAVRELVRSLKHTEIECLTLYAFSSE 64
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW+RP E+ +L+ L++ F+K N++K+ ++G+ L DI+ +L++A +QT
Sbjct: 65 NWKRPEDEVDDLMNLMRKFIKSDLPEFVANDVKLHILGDWRGLAPDIVAMLEDALEQTSG 124
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
+ L +A NY + + + I L ++ +P DL+I
Sbjct: 125 GSR-TLAVALNYG--------AQAEIAAAARAAAEQGSITEEAIEANLYSAGLPPLDLLI 175
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
RT GE RLS+FLLWQ AY+E +F WPDF+ E AL+Q+ R+RRFGG
Sbjct: 176 RTSGEVRLSNFLLWQAAYAEMIFTEVLWPDFTPEHLRDALDQFAGRERRFGG 227
>gi|325971043|ref|YP_004247234.1| undecaprenyl pyrophosphate synthase [Spirochaeta sp. Buddy]
gi|324026281|gb|ADY13040.1| Undecaprenyl pyrophosphate synthase [Spirochaeta sp. Buddy]
Length = 232
Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats.
Identities = 86/230 (37%), Positives = 126/230 (54%), Gaps = 5/230 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+GIIMDGNGRWA R LPR AGH +G++ ++ AA GI +T + FS NW+R
Sbjct: 8 PVHLGIIMDGNGRWAKKRSLPRTAGHAEGLKALKRVICEAAAQGIGYVTFYTFSTENWKR 67
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E++ L+ L + + K+ I++ G+ L D+ +++ +TR NT +
Sbjct: 68 SEQEVAYLMHLFVAKIHGELSFYNKHGIRILARGDLQKLPMDVQQAIEKTVFETRNNTTI 127
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+A NY RDEI RA+ D+ + IA LD VP D+I+R+
Sbjct: 128 TAIVAINYGGRDEICRAVNKCI-----ALNPGQDITEASIADNLDLPQVPPVDMIVRSAN 182
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
EKRLS+FLLW AY+E F +YWPD++ E + Y+ R R+FGG+
Sbjct: 183 EKRLSNFLLWDSAYAELAFYEKYWPDWNEEDVRIVCHDYSQRVRKFGGIE 232
>gi|291298259|ref|YP_003509537.1| undecaprenyl diphosphate synthase [Stackebrandtia nassauensis DSM
44728]
gi|290567479|gb|ADD40444.1| undecaprenyl diphosphate synthase [Stackebrandtia nassauensis DSM
44728]
Length = 256
Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats.
Identities = 84/243 (34%), Positives = 128/243 (52%), Gaps = 8/243 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGL-PRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ + P H+G+++DGN RWA GL GHR+G E ++ E+G+ ++T
Sbjct: 15 LARQLEGKPLPQHVGVMVDGNRRWAKDMGLLNPNDGHREGAEHIKRLLRWCDEMGVGHVT 74
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++ S N RP +E+ L+++I+ + + +R++G L V+K+
Sbjct: 75 VWLLSTENLSRPAAELDPLLQIIEDLAVELAEEGQPWG--LRIVGALDLLPAKHATVIKD 132
Query: 120 AEDQTRL-NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYL 174
A ++TR N G + +A Y EI+ A++++ Q+ G + ++ IAK+L
Sbjct: 133 AAERTRDRNDGAIINLAICYGGHREIADAVRSLLQEYARGGKTLDEVADLIEEGHIAKHL 192
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
P PDL+IRT GE+RLS FLLWQ AYSEF F WPDF R F AL Y R R
Sbjct: 193 YLHGQPAPDLLIRTSGEQRLSGFLLWQSAYSEFYFCDMNWPDFRRVDFLRALRSYATRQR 252
Query: 235 RFG 237
RFG
Sbjct: 253 RFG 255
>gi|256374863|ref|YP_003098523.1| undecaprenyl diphosphate synthase [Actinosynnema mirum DSM 43827]
gi|255919166|gb|ACU34677.1| undecaprenyl diphosphate synthase [Actinosynnema mirum DSM 43827]
Length = 259
Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats.
Identities = 85/242 (35%), Positives = 124/242 (51%), Gaps = 7/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLT 59
+ + P H+G+++DGN RWA G A GH G E++ + ++ +T
Sbjct: 19 LTRWLDGRQRPRHVGVVLDGNRRWAKEAGFDDVAHGHLAGARKILELLNWCRDAEVEVVT 78
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++ S +N RP E+ L+ +I + K N +VR +G L + L
Sbjct: 79 LWLLSTDNLTRPTKELEPLLGIIADIVDKLAE--PANPWQVRHVGALDMLPTETAARLSA 136
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLD 175
A +TR TGL + +A Y R EI+ A++ + Q ++ D IA++L
Sbjct: 137 ASLRTRGRTGLQVNVAVGYGGRQEIADAVRKLLQKHAESGGTIEELAEVLDVDHIAEHLY 196
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
TS PDPDL+IRT GE+RLS F+LWQ A+SEF F YWP+F R F AL Y +R RR
Sbjct: 197 TSGQPDPDLLIRTSGEQRLSGFMLWQSAHSEFWFCEAYWPEFRRTDFLRALRDYAIRHRR 256
Query: 236 FG 237
FG
Sbjct: 257 FG 258
>gi|20092520|ref|NP_618595.1| di-trans-poly-cis-decaprenylcistransferase [Methanosarcina
acetivorans C2A]
gi|42559838|sp|Q8TJQ7|UPPS_METAC RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|19917790|gb|AAM07075.1| di-trans-poly-cis-decaprenylcistransferase [Methanosarcina
acetivorans C2A]
Length = 298
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 84/240 (35%), Positives = 132/240 (55%), Gaps = 7/240 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ ++SS PDHI +IMDGN R+A RG R GH G EV +++ E+G+K LT+
Sbjct: 17 LEKEILSSEIPDHIAVIMDGNRRYAGQRGRTRSFGHAMGAEVTEQVIEWCYEIGVKELTL 76
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFS N++R E+ L LI K + + ++RVIG+R L + ++
Sbjct: 77 YAFSTENFQRSEEEVDGLFNLINEKFLKLYNDKRTYEKETQIRVIGDRTKLPAFLNKSIE 136
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
+ E T + NL +A Y R +I +A+++I + SG + DVD +LI+K+L +
Sbjct: 137 KIEKATETHRKFNLNVAIAYGGRQDIMQAVRDIAACVSSGKLSLEDVDENLISKHLYPAP 196
Query: 179 ---VPDPDLIIRTGGEKRLSDFLLWQVAYSEF--VFIPEYWPDFSRELFFHALNQYNLRD 233
VP+ DLI+RTGG++R+S+FL WQ SE F +WP+F + ++ Y R
Sbjct: 197 GVSVPNVDLIVRTGGDERVSNFLPWQANGSECATYFCAPFWPEFRKIDLLRSIRVYQARK 256
>gi|19552216|ref|NP_600218.1| undecaprenyl pyrophosphate synthase [Corynebacterium glutamicum
ATCC 13032]
gi|22261824|sp|P38118|UPPS1_CORGL RecName: Full=Undecaprenyl pyrophosphate synthase 1; Short=UPP
synthase 1; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase 1;
AltName: Full=Undecaprenyl diphosphate synthase 1;
Short=UDS 1
gi|21323758|dbj|BAB98384.1| Undecaprenyl pyrophosphate synthase [Corynebacterium glutamicum
ATCC 13032]
Length = 225
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 80/227 (35%), Positives = 118/227 (51%), Gaps = 7/227 (3%)
Query: 17 IMDGNGRWAAARGL-PRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEI 75
+ DGN RWA G GHR G + E+V +V + +T++ S+ N R E+
Sbjct: 1 MCDGNRRWAREAGFTDVSHGHRVGAKKIGEMVRWCDDVDVNLVTVYLLSMENLGRSSEEL 60
Query: 76 SELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIA 135
L +I + + N +VR++G+ L D + C L++AE+ T NTG+ + +A
Sbjct: 61 QLLFDIIADVADELAR--PETNCRVRLVGHLDLLPDPVACRLRKAEEATVNNTGIAVNMA 118
Query: 136 FNYSSRDEISRAIKNIFQDIESGSVCSHDVDS----SLIAKYLDTSDVPDPDLIIRTGGE 191
Y R EI A++ + + + ++ I+ +L TS PDPDL+IRT GE
Sbjct: 119 VGYGGRQEIVDAVQKLLTIGKDEGLSVDELIESVKVDAISTHLYTSGQPDPDLVIRTSGE 178
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+RLS F+LWQ AYSE F YWP F R F A+ Y+ R RRFG
Sbjct: 179 QRLSGFMLWQSAYSEIWFTDTYWPAFRRIDFLRAIRDYSQRSRRFGK 225
>gi|73667812|ref|YP_303827.1| undecaprenyl pyrophosphate synthetase [Methanosarcina barkeri str.
Fusaro]
gi|72394974|gb|AAZ69247.1| Undecaprenyl pyrophosphate synthetase [Methanosarcina barkeri str.
Fusaro]
Length = 292
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 81/240 (33%), Positives = 130/240 (54%), Gaps = 7/240 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ +++S P HI +IMDGN R+A G R GH G EV +++ E+G+K LT+
Sbjct: 17 LQRKILNSEIPHHIAVIMDGNRRYAGQFGKARSFGHAMGAEVTEKVIEWCYEIGVKQLTL 76
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFS N++R E+ L LI K + + +VRVIG+R L + ++
Sbjct: 77 YAFSTENFQRSEEEVDGLFNLINDKFLKLYSDPRTHEKETQVRVIGDRSKLPAFLNESIE 136
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
+ E T+ L +A Y R +I +A+++I I +G + +VD SLI+K+L +
Sbjct: 137 KIEKATKNYGKFYLNVAIAYGGRQDIIQAVRDIAGCISNGKLSLEEVDESLISKHLYPAP 196
Query: 179 ---VPDPDLIIRTGGEKRLSDFLLWQVAYSEF--VFIPEYWPDFSRELFFHALNQYNLRD 233
VP+ DL+IRTGG++R+S+FL WQ SE F +WP+F + ++ Y R+
Sbjct: 197 GFSVPNVDLVIRTGGDERVSNFLPWQANGSECAAYFCAPFWPEFRKIDLLRSVRVYQARE 256
>gi|8843798|dbj|BAA97346.1| undecaprenyl pyrophosphate synthetase-like [Arabidopsis thaliana]
Length = 225
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 89/222 (40%), Positives = 127/222 (57%), Gaps = 2/222 (0%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGN RWA GL GH G + E ++GI ++ FAFS NW R E+
Sbjct: 1 MDGNRRWAKRAGLLTSQGHEAGAKRLIEFSELCFKLGIHTVSAFAFSTENWGRHKIEVKC 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ LI+ +LK ++ +V VIGN + + +L ++E E+ TR +L +A +
Sbjct: 61 LMSLIQHYLKSKIQYFQREETRVSVIGNLTKIPESLLRTVQEIEEATRSYKKKHLILAID 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS--DVPDPDLIIRTGGEKRLS 195
YS R +I RA K+I + E G + DVD +LI + L T+ + P PDL+IRT GE+R+S
Sbjct: 121 YSGRLDILRACKSIVKKSEKGLIREEDVDEALIERELLTNCTEFPSPDLLIRTSGEQRIS 180
Query: 196 DFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+F LWQ+AY+E F P WPDF ++ AL Y R+RRFG
Sbjct: 181 NFFLWQLAYTELFFSPVLWPDFDKDKLLEALVSYQRRERRFG 222
>gi|94970163|ref|YP_592211.1| undecaprenyl pyrophosphate synthase [Candidatus Koribacter
versatilis Ellin345]
gi|94552213|gb|ABF42137.1| Undecaprenyl pyrophosphate synthetase [Candidatus Koribacter
versatilis Ellin345]
Length = 256
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 94/232 (40%), Positives = 131/232 (56%), Gaps = 13/232 (5%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA RGLPR AGHR G+ V A + G++ LT++AFS +NWRRP
Sbjct: 19 HVAIIMDGNGRWATQRGLPRAAGHRAGVAAVRRTVEHAPDFGVRRLTVYAFSADNWRRPS 78
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+E+ + LI+++L+ L+ +++ IG R + +L ++ E T N L L
Sbjct: 79 AEVQSIFWLIRAYLRIECERLRSAGVRLEAIGRRDRIPKGLLSEIERVESITAANRKLEL 138
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD---TSDVPDPDLIIRTG 189
+A +YSSRD I+RA + + LD ++ D DL+IRTG
Sbjct: 139 RVAVDYSSRDAIARAC----------AGLPESASPKHVRAALDASLSAGHGDVDLLIRTG 188
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
GEKRLSDFLLW+ AY+EF F P WPDF A+N + R+RRFG +
Sbjct: 189 GEKRLSDFLLWESAYAEFHFTPCMWPDFQPADLDAAINAFRARERRFGSVPA 240
>gi|313682235|ref|YP_004059973.1| undecaprenyl pyrophosphate synthetase [Sulfuricurvum kujiense DSM
16994]
gi|313155095|gb|ADR33773.1| Undecaprenyl pyrophosphate synthetase [Sulfuricurvum kujiense DSM
16994]
Length = 225
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 88/234 (37%), Positives = 127/234 (54%), Gaps = 11/234 (4%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVG-IKNLTIFAFSIN 66
S+ P HI IIMDGNGRWA A+G R GH KG E I A I LT++AFS
Sbjct: 2 SNLPSHIAIIMDGNGRWAEAQGKNRTYGHEKGAETVRAITTYCARHSEIDRLTLYAFSTE 61
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW+RP E+ L+KL++ +LK + + NI+ IG+ + V+ + ++ T
Sbjct: 62 NWKRPKIEVEFLMKLLERYLKSERSTYLEGNIRFEPIGDLSIFSKSLRSVIDDVQNATAQ 121
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
GL +A NY RDEI RA + ++ + + + LD + D DL+I
Sbjct: 122 CDGLTQCLALNYGGRDEIVRAANALRENGP--------LSVETLTRALDCTH--DVDLLI 171
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RTGG+ RLS+FLLWQ AY+E F WP+F+ + + ++ +RRFGGL+
Sbjct: 172 RTGGDHRLSNFLLWQAAYAELFFTKTLWPEFTTDELESIIKKFRTVERRFGGLN 225
>gi|195626378|gb|ACG35019.1| dehydrodolichyl diphosphate synthase 6 [Zea mays]
Length = 303
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 74/249 (29%), Positives = 121/249 (48%), Gaps = 18/249 (7%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++A + P HI IMDGN R+A R + AGHR G + E+G+K +T+
Sbjct: 39 LIAILSYGPMPKHIAFIMDGNRRYAKFRSMQEGAGHRMGFSTLIASLMYCYEMGVKYITV 98
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI+N++R SE+ L++L++ + + + + K N K+ GN L + +
Sbjct: 99 YAFSIDNFKRDPSEVESLMQLMEEKINELLENRSVINKINCKINFWGNLDLLYEPVRLAA 158
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSH-------------- 163
++ T NTGL I Y+S EI A+ + + H
Sbjct: 159 EKLMASTAGNTGLVFSICMPYNSTSEIVNAVSEVCAERMEMFQSEHIGDCNGHAANNGVR 218
Query: 164 -DVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELF 222
++ + + +++ ++ PDPD++IRT GE RLS+FLLWQ +S WP+FS
Sbjct: 219 SEISVADLDRHMYSAGCPDPDIVIRTSGETRLSNFLLWQTTFSHLQNPDPLWPEFSFRHL 278
Query: 223 FHALNQYNL 231
A+ QY
Sbjct: 279 VWAILQYQR 287
>gi|253744438|gb|EET00652.1| Undecaprenyl pyrophosphate synthase [Giardia intestinalis ATCC
50581]
Length = 240
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 84/241 (34%), Positives = 134/241 (55%), Gaps = 13/241 (5%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ +IMDGNGRWA + R GH++G+ +V E I LTI+AFS+ NW
Sbjct: 2 IPTHVAVIMDGNGRWARRQMQERTFGHKQGVTALESVVDECIEREISFLTIYAFSMENWS 61
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNR-LSLDDDILCVLKEAEDQTRLNT 128
RP +E+S L+ L+ + +++ + + N+KV+ G R + + ++ + E T T
Sbjct: 62 RPPAEVSFLLDLLDATIQRVRATYQAKNVKVQFCGERTTQIPEKVINAMDCIERDTAKCT 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----------IAKYLDTSD 178
GL L I FNY + EI++A ++I + ++ + L I +L +
Sbjct: 122 GLVLSICFNYGGQVEIAQACRSILAEC-LDGDAVENIKTQLQMPLEQFVQQIGAHLY-AQ 179
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+P DL+IRTG EKRLS+F+ W +AY+E +F WP+F+ E F + LN++ R RRFG
Sbjct: 180 LPPVDLLIRTGCEKRLSNFIPWHLAYAEIIFSDLLWPEFTVEDFRNCLNEFASRTRRFGK 239
Query: 239 L 239
+
Sbjct: 240 V 240
>gi|238062721|ref|ZP_04607430.1| undecaprenyl-diphosphate synthase [Micromonospora sp. ATCC 39149]
gi|237884532|gb|EEP73360.1| undecaprenyl-diphosphate synthase [Micromonospora sp. ATCC 39149]
Length = 256
Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats.
Identities = 84/243 (34%), Positives = 128/243 (52%), Gaps = 8/243 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGL-PRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ A++ P H+G++ DGN RWA G GHR G E E++ G+ ++T
Sbjct: 15 LTATLAGKPVPRHVGVMCDGNRRWAREMGFVDPNDGHRMGAERIKELLRWCDAAGVGHVT 74
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++ S +N RP E+ L+++I+ + ++R++G L LK
Sbjct: 75 LWLLSTDNLSRPAEELDPLLQIIEDLSTELAEEGNP--WRLRMVGALDVLPAHHAAALKA 132
Query: 120 AEDQTRLN-TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYL 174
AE++TR G + IA Y R EI+ A++++ + + ++ +L I+++L
Sbjct: 133 AEERTRERAGGAQVNIAVGYGGRREIADAVRSLLHEHAAAGGTIEELAETLDVDDISEHL 192
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
T +PDPDLIIRT GE+RLS F+LWQ A+SEF F WPDF R F AL Y R R
Sbjct: 193 YTRGLPDPDLIIRTSGEQRLSGFMLWQSAHSEFYFCELNWPDFRRVDFLRALRSYANRQR 252
Query: 235 RFG 237
RFG
Sbjct: 253 RFG 255
>gi|330465770|ref|YP_004403513.1| undecaprenyl diphosphate synthase [Verrucosispora maris AB-18-032]
gi|328808741|gb|AEB42913.1| undecaprenyl diphosphate synthase [Verrucosispora maris AB-18-032]
Length = 256
Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats.
Identities = 84/244 (34%), Positives = 129/244 (52%), Gaps = 8/244 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGL-PRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ A + P H+G++ DGN RWA G GHR G E E++ G+ ++T
Sbjct: 15 LTAKLAGRPVPRHVGVMCDGNRRWAREMGFVDPNDGHRMGAERIKELLRWCDAAGVGHVT 74
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++ S +N RP +E+ L+++I+ + + ++R++G L LK
Sbjct: 75 LWLLSTDNLSRPAAELDPLLQIIEDLTTELAEAGNP--WRLRMVGALDVLPAHHAAALKA 132
Query: 120 AEDQTRLNTGL-NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYL 174
AE++TR +G + IA Y R EI+ A++++ + + ++ D I+++L
Sbjct: 133 AEERTRDRSGGAQVNIAVGYGGRREIADAVRSLLLEHAANGGTLEELAGSLDVDDISEHL 192
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
T +PDPDLIIRT GE+RLS F+LWQ A+SEF F WPDF R F AL Y R R
Sbjct: 193 YTRGLPDPDLIIRTSGEQRLSGFMLWQSAHSEFYFCELNWPDFRRVDFLRALRSYATRQR 252
Query: 235 RFGG 238
RFG
Sbjct: 253 RFGA 256
>gi|269957412|ref|YP_003327201.1| undecaprenyl diphosphate synthase [Xylanimonas cellulosilytica DSM
15894]
gi|269306093|gb|ACZ31643.1| undecaprenyl diphosphate synthase [Xylanimonas cellulosilytica DSM
15894]
Length = 253
Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats.
Identities = 81/242 (33%), Positives = 132/242 (54%), Gaps = 7/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ AS++ + P H+G+I+DGN RWA + G GHR+G + E + A GI+ +T+
Sbjct: 15 LAASLVPNRLPRHVGVILDGNRRWAKSFGETAATGHRRGADKIAEFLGWAEADGIEVVTL 74
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N R E+ +L+ +I+ ++ S ++RV+G L + + L+EA
Sbjct: 75 WMLSTDNLARSAGELGDLLDIIEDAVRGLADS---RRWRLRVVGRLDLLPERLAVALREA 131
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVC----SHDVDSSLIAKYLDT 176
++T GL + +A Y R EI+ A++ ++ + + +D IA +L T
Sbjct: 132 AERTAGVRGLQVNVAIGYGGRHEIADAVRAYLREQAAAGTTMAELAETIDVDDIADHLYT 191
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
+ PDP+L+IRT GE+R+ FL+WQ A+SE F YWPDF R F AL + R+RR
Sbjct: 192 AGQPDPELVIRTSGEQRIGGFLMWQSAHSELYFCEAYWPDFRRTDFLRALRDFTRRERRL 251
Query: 237 GG 238
G
Sbjct: 252 GR 253
>gi|296394377|ref|YP_003659261.1| undecaprenyl diphosphate synthase [Segniliparus rotundus DSM 44985]
gi|296181524|gb|ADG98430.1| undecaprenyl diphosphate synthase [Segniliparus rotundus DSM 44985]
Length = 264
Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats.
Identities = 83/239 (34%), Positives = 125/239 (52%), Gaps = 7/239 (2%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGL-PRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ + P HI ++ DGN RWA A G GHR G E ++ G+ ++T++
Sbjct: 27 QLRGAKLPQHIAVLCDGNRRWARANGFADVSHGHRVGALKIAEFLSWCDAEGVGHVTVWL 86
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
S N RR E++ L+ +I + + N +VR++G L ++ L +
Sbjct: 87 LSTENLRRDPEELAALLDVIHEVVAEL--CAPDKNWQVRIVGALEFLPEEFATNLLRSAK 144
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSD 178
QT TG ++ +A Y R EIS A++++ + S + ++ +D + I ++L TS
Sbjct: 145 QTVGRTGNHVNVAVGYGGRQEISDAVRSLVAEKLSAGLTGNELVQSIDVAGIGEHLYTSG 204
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDPDL+IRT GE+RLS FLLWQ +SE F YWP+F R F AL Y R RRFG
Sbjct: 205 QPDPDLVIRTSGEQRLSGFLLWQSVHSEIWFTEAYWPEFRRVDFLRALRDYAARHRRFG 263
>gi|315606057|ref|ZP_07881088.1| undecaprenyl diphosphate synthase [Actinomyces sp. oral taxon 180
str. F0310]
gi|315312339|gb|EFU60425.1| undecaprenyl diphosphate synthase [Actinomyces sp. oral taxon 180
str. F0310]
Length = 253
Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 79/242 (32%), Positives = 130/242 (53%), Gaps = 7/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ A + ++ P HIG+I+DGN RWA + G GHR G +E + A + G+ +T+
Sbjct: 15 LKAELSEANVPAHIGVILDGNRRWAKSLGATASQGHRAGAGKISEFLQWADDAGVSIVTL 74
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N R +E+ EL+++I + + K+ ++G+ L + + L+ +
Sbjct: 75 WLLSTDNLSRDAAELGELLRIICEAVSLLAD---QERWKLALVGDLSLLPERVAEDLRAS 131
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLDT 176
+T G+ + IA Y R EI+ A++++ ++ + ++ + I +L T
Sbjct: 132 VARTEGTVGMTVNIAVGYGGRHEITEAVRSMMREAAAEGRTLEELADSFTDADITAHLYT 191
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
D PDPDL+IRT GE+RLS F+LWQ +SE+ F YWPDF R F AL Y R+RR
Sbjct: 192 KDQPDPDLVIRTSGEQRLSGFMLWQSVHSEYYFCEVYWPDFRRVDFLRALRSYAQRERRM 251
Query: 237 GG 238
G
Sbjct: 252 GK 253
>gi|77414702|ref|ZP_00790834.1| undecaprenyl diphosphate synthase [Streptococcus agalactiae 515]
gi|77159246|gb|EAO70425.1| undecaprenyl diphosphate synthase [Streptococcus agalactiae 515]
Length = 204
Score = 239 bits (609), Expect = 4e-61, Method: Composition-based stats.
Identities = 87/204 (42%), Positives = 120/204 (58%), Gaps = 4/204 (1%)
Query: 40 IEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIK 99
++ E+ AA+ +G+K LT++AFS NW RP E+ ++ L F K L KNN++
Sbjct: 1 MDALQEVTIAASGLGVKVLTVYAFSTENWSRPDDEVKFIMNLPVEFFDKYVPELDKNNVR 60
Query: 100 VRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGS 159
V+VIG+ L ++ A +T+ N+GL L A NY R EI+ AIK I QD+
Sbjct: 61 VQVIGDTHKLPKATYDAMQRACLRTKHNSGLVLNFALNYGGRSEITNAIKEIAQDVLEAK 120
Query: 160 VCSHDVDSSLIAKYLDTSDVP----DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWP 215
+ D+ L+A +L T+ +P DPDLIIRT GE RLS+FL WQ AYSEF F P WP
Sbjct: 121 LNPDDITEDLVANHLMTNSLPYLYRDPDLIIRTSGELRLSNFLPWQSAYSEFYFTPVLWP 180
Query: 216 DFSRELFFHALNQYNLRDRRFGGL 239
DF ++ A+ YN R RRFG +
Sbjct: 181 DFKKDELHKAIVDYNQRHRRFGSV 204
>gi|148284145|ref|YP_001248235.1| undecaprenyl pyrophosphate synthetase [Orientia tsutsugamushi str.
Boryong]
gi|146739584|emb|CAM79334.1| undecaprenyl pyrophosphate synthetase [Orientia tsutsugamushi str.
Boryong]
Length = 231
Score = 239 bits (609), Expect = 4e-61, Method: Composition-based stats.
Identities = 101/231 (43%), Positives = 142/231 (61%), Gaps = 5/231 (2%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGN RWA A L G+ KG+EV ++V A + I++LT+FAFS+ NW+R
Sbjct: 4 KHLAIIMDGNLRWAVANELTMFDGYNKGVEVAKKVVDCAIKNKIQHLTLFAFSMENWKRS 63
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
EI+ L L++S+L+ + +K VIGN L+ ++ V+KE E+ T N+ LN
Sbjct: 64 QLEINYLQALMQSYLESDARNYCDYGVKFTVIGNTTKLNFELQKVIKEVEELTINNSVLN 123
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L+IAF+YS R EI A K I S ++ + ++ +YL + +PD DL+IRT GE
Sbjct: 124 LYIAFSYSGRSEIIDAYKRII----SSNIKAEELTEQEFRRYLYSPTMPDIDLLIRTSGE 179
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+R+S+FLLW +AYSE FI +YWPDF F AL Y R R FG LS+K
Sbjct: 180 QRISNFLLWHLAYSELYFIDKYWPDFDEADFNIALEDYLRRKRTFG-LSRK 229
>gi|212723440|ref|NP_001131688.1| hypothetical protein LOC100193048 [Zea mays]
gi|194692248|gb|ACF80208.1| unknown [Zea mays]
gi|224031727|gb|ACN34939.1| unknown [Zea mays]
Length = 303
Score = 239 bits (609), Expect = 4e-61, Method: Composition-based stats.
Identities = 74/249 (29%), Positives = 122/249 (48%), Gaps = 18/249 (7%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++A + P HI IMDGN R+A R + AGHR G + E+G+K +T+
Sbjct: 39 LIAILSYGPMPKHIAFIMDGNRRYAKFRSMQEGAGHRMGFSTLIASLMYCYEMGVKYITV 98
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI+N++R SE+ L++L++ + + + + K N K+ GN L + +
Sbjct: 99 YAFSIDNFKRDPSEVESLMQLMEEKINELLENRSVINKINCKINFWGNLDLLYEPVRLAA 158
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSH-------------- 163
++ T NTGL I Y+S EI A+ + + H
Sbjct: 159 EKLMASTAGNTGLVFSICMPYNSTSEIVNAVSQVCAERMEMFQSEHIGECNGHAANNGVR 218
Query: 164 -DVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELF 222
++ + + +++ +++ PDPD++IRT GE RLS+FLLWQ +S WP+FS
Sbjct: 219 SEISVADLDRHMYSAECPDPDIVIRTSGETRLSNFLLWQTTFSHLQNPDPLWPEFSFRHL 278
Query: 223 FHALNQYNL 231
A+ QY
Sbjct: 279 VWAVLQYQR 287
>gi|15920367|ref|NP_376036.1| undecaprenyl pyrophosphate synthetase [Sulfolobus tokodaii str. 7]
gi|41018476|sp|Q976K2|UPPS_SULTO RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|15621149|dbj|BAB65145.1| 262aa long hypothetical undecaprenyl pyrophosphate synthetase
[Sulfolobus tokodaii str. 7]
Length = 262
Score = 238 bits (608), Expect = 5e-61, Method: Composition-based stats.
Identities = 85/241 (35%), Positives = 126/241 (52%), Gaps = 3/241 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + P H+GII DGN RWA A L + G +++ E+GIKN+T+
Sbjct: 22 LWNEIKNGPFPQHVGIIPDGNRRWARANNLSINDAYYSGYRKLKQVLLWLLEMGIKNITV 81
Query: 61 FAFSINNW-RRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVL 117
FA S N +R E++ + IK+ L++ + K +KVR IG L D+L VL
Sbjct: 82 FALSTENCDKRSNLELNTIFNYIKAGLEELLYGEIIYKYEVKVRAIGLIYKLPLDLLEVL 141
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+ +T L +A Y R EI A K I D E G + D++ ++ +YL
Sbjct: 142 NQLSKKTENFNKRKLTLAICYGGRQEIIDATKKIIADYEKGKIKLDDINENIFRQYLYDK 201
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
++ D DL+IR+ GE R+S+FLLW +AYSE F+ YWPDF + + A+ Y R R FG
Sbjct: 202 ELEDIDLVIRSSGEIRISNFLLWHIAYSELFFVDTYWPDFRKIDLWRAIRSYQKRKRNFG 261
Query: 238 G 238
Sbjct: 262 A 262
>gi|19115869|ref|NP_594957.1| cis-prenyltransferase (predicted) [Schizosaccharomyces pombe 972h-]
gi|6840813|sp|O14171|YE54_SCHPO RecName: Full=Uncharacterized protein C4D7.04c
gi|4038613|emb|CAB11276.1| cis-prenyltransferase (predicted) [Schizosaccharomyces pombe]
Length = 264
Score = 238 bits (608), Expect = 5e-61, Method: Composition-based stats.
Identities = 82/238 (34%), Positives = 132/238 (55%), Gaps = 4/238 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M+ ++ P HI +MDGN RWA R + GH G E ++ ++G+K ++
Sbjct: 25 MINTIKRGKVPQHIAFVMDGNRRWARQRRMETIEGHSSGFEALKSLLKVCLKLGVKEVSA 84
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKK---GFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
F FSI N++R E+ L+++ K+ L + + + I++R++G+ L D+L
Sbjct: 85 FTFSIENFKRSKYEVDMLMEIAKNSLTQITAHGDLVDQYGIRIRIVGDLSRLQPDVLETA 144
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+A + T+ NT L + F Y+SR EI+ ++++I + E G++ D+D + K L
Sbjct: 145 LKAVEITKHNTKATLNVCFPYTSRHEIATSVQSIVKMAEDGTITPEDIDEDIFEKNLLIK 204
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVA-YSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
D DL+IRT G +RLSDF+LWQ +E FI YWPDFS FF L QY L+++
Sbjct: 205 DSLPLDLLIRTSGVERLSDFMLWQCHKNTEIKFIDFYWPDFSIWKFFPMLIQYQLQNQ 262
>gi|91974543|ref|YP_567202.1| undecaprenyl diphosphate synthase [Rhodopseudomonas palustris
BisB5]
gi|91680999|gb|ABE37301.1| Undecaprenyl pyrophosphate synthetase [Rhodopseudomonas palustris
BisB5]
Length = 245
Score = 238 bits (608), Expect = 5e-61, Method: Composition-based stats.
Identities = 102/228 (44%), Positives = 132/228 (57%), Gaps = 7/228 (3%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+GIIMDGNGRWA RGL R GH G+E +V AA G+ LT+FAFS +NWRRP
Sbjct: 15 HVGIIMDGNGRWATRRGLSRLRGHEAGVEAIRRVVEAAPRQGVGTLTLFAFSSDNWRRPK 74
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+E++ L+ L++ +L SL +N +++ VIG R L D I + AE T LNL
Sbjct: 75 AEVAALMGLLRIYLANEVKSLVRNGVRLTVIGRRDRLPDGIAAAIAAAEVDTTGGETLNL 134
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA +YS+RD I A + CS + S L+ + D DLIIRT GEK
Sbjct: 135 RIAVDYSARDAILNAAAHA----REIGNCSRETFSDLVTGD---PRLRDVDLIIRTSGEK 187
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RLSDFLLW+ AY+E F WPDF + AL ++ R+RRFGGL
Sbjct: 188 RLSDFLLWESAYAELHFTERMWPDFDEDDLADALASFHRRERRFGGLQ 235
>gi|297796815|ref|XP_002866292.1| hypothetical protein ARALYDRAFT_919084 [Arabidopsis lyrata subsp.
lyrata]
gi|297312127|gb|EFH42551.1| hypothetical protein ARALYDRAFT_919084 [Arabidopsis lyrata subsp.
lyrata]
Length = 245
Score = 238 bits (608), Expect = 5e-61, Method: Composition-based stats.
Identities = 81/223 (36%), Positives = 123/223 (55%), Gaps = 2/223 (0%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ +I+DGN RWA RGL GH G E +G +++FAFS NW
Sbjct: 12 KMPKHVAVILDGNRRWAEKRGLGTSEGHEAGARRLLENAKDCFAMGTNTISLFAFSTENW 71
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP E+ L+ L + + +++ IK+ VIGNR + + + +++E E+ T+
Sbjct: 72 ERPEDEVKCLMALFEKHFRAEMPFFQRDKIKILVIGNRAKIPESLRGLIEEVEEATKSYE 131
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT--SDVPDPDLII 186
G NL IA +YS R +I +A K++ ++ G + D++ + K L T S+ P+PDL+I
Sbjct: 132 GKNLIIAIDYSGRFDILQACKSLATKVKDGLIQVEDINEEAMEKELLTKCSEFPNPDLLI 191
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQY 229
RT GE+R+S+F LWQ AY+E F WPDF + AL Y
Sbjct: 192 RTSGEQRISNFFLWQSAYTELYFPTVLWPDFGEAEYLEALTWY 234
>gi|115466642|ref|NP_001056920.1| Os06g0167400 [Oryza sativa Japonica Group]
gi|5091516|dbj|BAA78751.1| putative cis-prenyltransferase [Oryza sativa Japonica Group]
gi|55296219|dbj|BAD67960.1| putative cis-prenyltransferase [Oryza sativa Japonica Group]
gi|113594960|dbj|BAF18834.1| Os06g0167400 [Oryza sativa Japonica Group]
gi|215717034|dbj|BAG95397.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635028|gb|EEE65160.1| hypothetical protein OsJ_20261 [Oryza sativa Japonica Group]
Length = 299
Score = 238 bits (608), Expect = 5e-61, Method: Composition-based stats.
Identities = 72/245 (29%), Positives = 120/245 (48%), Gaps = 14/245 (5%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+VA + P HI IMDGN R+A R + +GHR G + E+G+K +T+
Sbjct: 39 IVAVLSYGPMPKHIAFIMDGNRRYAKFRSIQEGSGHRVGFSALIASLLYCYEMGVKYITV 98
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI+N++R +E+ L++L++ + + + + K N K+ GN L +
Sbjct: 99 YAFSIDNFKRDPTEVKSLMELMEEKINELLENRNVINKVNCKINFWGNLDMLSKSVRVAA 158
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSH-----------DVD 166
++ T NTGL + Y+S EI A+ + + D+
Sbjct: 159 EKLMATTAENTGLVFSVCMPYNSTSEIVNAVNKVCAERRDILQREDADSVANNGVYSDIS 218
Query: 167 SSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHAL 226
+ + +++ ++ PDPD++IRT GE RLS+FLLWQ +S WP+FS + A+
Sbjct: 219 VADLDRHMYSAGCPDPDIVIRTSGETRLSNFLLWQTTFSHLQNPDPLWPEFSFKHLVWAI 278
Query: 227 NQYNL 231
QY
Sbjct: 279 LQYQR 283
>gi|255994879|ref|ZP_05428014.1| di-trans,poly-cis-decaprenylcistransferase [Eubacterium saphenum
ATCC 49989]
gi|255993592|gb|EEU03681.1| di-trans,poly-cis-decaprenylcistransferase [Eubacterium saphenum
ATCC 49989]
Length = 233
Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats.
Identities = 89/232 (38%), Positives = 135/232 (58%), Gaps = 13/232 (5%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA L GH G+ E+V + +G+K LT++AFS N++R E+S
Sbjct: 1 MDGNGRWARQNKLSILRGHNAGMLRVKEVVKESDRLGVKYLTVYAFSTENFKRSSEEVSG 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
+ L+ F+ + +NN+KV V+G+ + ++ LK A D+T N GL +A N
Sbjct: 61 IFSLVCKFVDSELDEIFENNVKVGVLGDIDKIPENAAVSLKRAIDRTANNDGLVFNVAIN 120
Query: 138 YSSRDEISRAIK------------NIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
Y R EI+RA + D +S D++ + ++K + +D+PDPDL+
Sbjct: 121 YGGRAEITRAARLACKEIINDIGGADAIDRKSLLSRLCDLNEADLSKNMY-ADIPDPDLV 179
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
IRT GE+R+S+FLLWQ+AYSEFVF EYWP+F+ +++ + +Y R RRFG
Sbjct: 180 IRTSGEERISNFLLWQIAYSEFVFAKEYWPEFTPDVYRRCIEEYKNRQRRFG 231
>gi|189184298|ref|YP_001938083.1| UPP synthetase [Orientia tsutsugamushi str. Ikeda]
gi|189181069|dbj|BAG40849.1| UPP synthetase [Orientia tsutsugamushi str. Ikeda]
Length = 231
Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats.
Identities = 101/231 (43%), Positives = 142/231 (61%), Gaps = 5/231 (2%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGN RWA A L G+ KG+EV ++V A + I++LT+FAFS+ NW R
Sbjct: 4 KHLAIIMDGNLRWAMANQLTMFDGYNKGVEVAKKVVDCAIKKKIQHLTLFAFSMENWNRS 63
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
EI+ L L++S+L+ + + +K VIG+ L+ ++ V+KE E+ T N+ LN
Sbjct: 64 QLEINYLQALMQSYLESDARNYCEYGVKFTVIGDTTKLNFELQKVIKEVEELTINNSVLN 123
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L+IAF+YS R EI A K I S ++ + ++ KYL + +PD DL+IRT GE
Sbjct: 124 LYIAFSYSGRSEIIDAYKRIV----SSNIKAEELTEQEFRKYLYSPTMPDIDLLIRTSGE 179
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+R+S+FLLW +AYSE FI +YWPDF F AL Y R R FG LS+K
Sbjct: 180 QRISNFLLWHLAYSELYFIDKYWPDFDEADFNIALEDYLRRKRTFG-LSRK 229
>gi|225021781|ref|ZP_03710973.1| hypothetical protein CORMATOL_01809 [Corynebacterium matruchotii
ATCC 33806]
gi|224945477|gb|EEG26686.1| hypothetical protein CORMATOL_01809 [Corynebacterium matruchotii
ATCC 33806]
Length = 223
Score = 238 bits (607), Expect = 6e-61, Method: Composition-based stats.
Identities = 88/223 (39%), Positives = 127/223 (56%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA RGL R GH++G V ++VAA + I L+ +AFS NWRR E+
Sbjct: 1 MDGNGRWAEQRGLKRTEGHKRGEAVLLDMVAACQALDIPYLSAYAFSTENWRRSADEVRF 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ + L + L + +KVR +G R L +L L+ AE+ T+ NT + LF+ N
Sbjct: 61 LMGFNRDVLTRQKMWLHERGVKVRWVGRRPRLWRSVLRELESAEELTKNNTSMTLFMCVN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R EI ++ I + + G + D+ +LD +PD DL +R GEKR S+F
Sbjct: 121 YGGRAEIIDGVREIVRKAQRGEIRPDDITEKNFHTFLDEPTMPDVDLFLRPSGEKRTSNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LLWQ AY+E V+ + +PD++ + F A+ +Y RDRRFGG
Sbjct: 181 LLWQSAYAEMVYQNKLFPDYTPQDLFDAVEEYAKRDRRFGGTK 223
>gi|268324172|emb|CBH37760.1| undecaprenyl pyrophosphate synthetase [uncultured archaeon]
Length = 322
Score = 238 bits (607), Expect = 6e-61, Method: Composition-based stats.
Identities = 84/247 (34%), Positives = 131/247 (53%), Gaps = 14/247 (5%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+V + SPP+H+ IIMDGN R+A G+ G+ G E+ +++ E G+K LTI
Sbjct: 35 LVDEVRERSPPEHVAIIMDGNRRYAKKIGVSTEEGYLYGAEITEQVIEWCFEAGVKQLTI 94
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFSI N+ R E L KL++ +K + K ++V+ IGN L D + ++
Sbjct: 95 YAFSIENFCRSAEEKERLFKLMRVEFEKISKDERVHKRGVRVKAIGNLNLLPDSVKEAIQ 154
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
+AE +T LF+A YS R EI +++ I ++ GS+ ++D I+K+L S+
Sbjct: 155 KAEQETAHYNSFKLFVAVAYSGRMEIVDSVRIIADRVKRGSLSVDEIDEETISKHLYISE 214
Query: 179 V----PD------PDLIIRTGGEKRLSDFLLWQVAYSEF--VFIPEYWPDFSRELFFHAL 226
+ D DLIIRTGGE RLS+F+ WQ +E F +WP+F + A+
Sbjct: 215 IEAGDSDSGAKTGVDLIIRTGGEMRLSNFVPWQALGNECAAYFCAPFWPEFRKIDLLRAI 274
Query: 227 NQYNLRD 233
Y R+
Sbjct: 275 RTYQERE 281
>gi|325913950|ref|ZP_08176306.1| Undecaprenyl pyrophosphate synthetase [Xanthomonas vesicatoria ATCC
35937]
gi|325539719|gb|EGD11359.1| Undecaprenyl pyrophosphate synthetase [Xanthomonas vesicatoria ATCC
35937]
Length = 236
Score = 238 bits (607), Expect = 6e-61, Method: Composition-based stats.
Identities = 89/225 (39%), Positives = 127/225 (56%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA R PR GHR G N + E G+ LT+FAFS NW RP E+
Sbjct: 1 MDGNGRWAQRRRRPRMIGHRAGARAVNRTIDFCLEKGVSALTLFAFSSENWGRPQEEVDA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+KL L +G L++ ++VR IG R + + AE T N L L IA +
Sbjct: 61 LMKLFLHALDRGVEELQRRGVQVRFIGERSRFATPLRERMATAERITAGNARLVLSIAAS 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R +I+ A + + +++ +G + +D +L++ + SD+P PDL IRTGG+ R+S+F
Sbjct: 121 YGGRQDIALAARALAEEVAAGRLQPQQIDEALLSSRVALSDLPAPDLFIRTGGDTRISNF 180
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
LLWQ+AY+E F WP+F + AL+ Y R+RRFG S +
Sbjct: 181 LLWQLAYTELWFTETLWPEFDAGVLQQALDDYAGRERRFGLTSAQ 225
>gi|21226720|ref|NP_632642.1| undecaprenyl pyrophosphate synthetase [Methanosarcina mazei Go1]
gi|20905008|gb|AAM30314.1| Undecaprenyl pyrophosphate synthetase [Methanosarcina mazei Go1]
Length = 324
Score = 238 bits (607), Expect = 6e-61, Method: Composition-based stats.
Identities = 83/240 (34%), Positives = 129/240 (53%), Gaps = 7/240 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ ++SS P+HI +IMDGN R+A G R GH G EV +++ E+G+K LT+
Sbjct: 43 LEKEILSSEIPEHIAVIMDGNRRYAGQLGKARIFGHAMGAEVTEQVIEWCYEIGVKQLTL 102
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFS N++R E+ L LI K + ++VRVIG+R L + +
Sbjct: 103 YAFSTENFQRSEEEVGGLFNLINEKFLKLHTDKRTYEKEMQVRVIGDRTKLPAYLNESID 162
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS- 177
E T + +L +A Y R +I +A+++I + SG + DV+ SLI+K+L +
Sbjct: 163 RIEKATEHHRKFSLNVAIAYGGRQDIMQAVRDIATCVSSGKLSLEDVNESLISKHLYPAP 222
Query: 178 --DVPDPDLIIRTGGEKRLSDFLLWQVAYSEF--VFIPEYWPDFSRELFFHALNQYNLRD 233
VP+ DLIIRTGG++R+S+FL WQ SE F +WP+F + ++ Y R
Sbjct: 223 GVPVPNVDLIIRTGGDERISNFLPWQANGSECATYFCAPFWPEFRKIDLLRSVRVYQARK 282
>gi|301114423|ref|XP_002998981.1| undecaprenyl pyrophosphate synthetase, putative [Phytophthora
infestans T30-4]
gi|262111075|gb|EEY69127.1| undecaprenyl pyrophosphate synthetase, putative [Phytophthora
infestans T30-4]
Length = 257
Score = 238 bits (607), Expect = 6e-61, Method: Composition-based stats.
Identities = 78/235 (33%), Positives = 130/235 (55%), Gaps = 5/235 (2%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HI +I+DGN R+ + GH G + + G++ LT+FAFS NW
Sbjct: 23 KIPRHIAVIIDGNRRYGKNKYGSGTRGHSDGTKTVMNFTDWCIDAGVEALTVFAFSTENW 82
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRV-IGNRLSLDDDILCVLKEAEDQTRLN 127
+R +EI L+KL+ F+ NI+VRV + + L ++ ++E E +T+
Sbjct: 83 KREKAEIDALMKLVDGFIHDILGEALTRNIRVRVLVSDSRKLPAFLVKSIQEVEAKTQQC 142
Query: 128 TGLNLFIAF----NYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
+L + Y +RDEI A K I ++ G D+D +L+ + + T+ +PDPD
Sbjct: 143 NVFHLNLCVRQAPVYGARDEIVGACKKIATEVAQGETSIDDIDENLLGQRMLTAGLPDPD 202
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+++RT GE R+S+FLL+Q+AY+E +F+ ++WP+ +RE + ++N R RRFG
Sbjct: 203 IMLRTSGELRISNFLLFQIAYAELIFMDKFWPEVTREDLQDIIVEFNRRKRRFGK 257
>gi|290956810|ref|YP_003487992.1| biosynthetic transferase [Streptomyces scabiei 87.22]
gi|260646336|emb|CBG69431.1| putative biosynthetic transferase [Streptomyces scabiei 87.22]
Length = 623
Score = 238 bits (607), Expect = 6e-61, Method: Composition-based stats.
Identities = 87/237 (36%), Positives = 132/237 (55%), Gaps = 2/237 (0%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ + P H+ I+MDGNGRWA GLPR GHR G ++V A E+G+ +LT++AF
Sbjct: 378 AIADAHLPRHVAIVMDGNGRWATGLGLPRDEGHRAGAVALRDVVQGALEIGLAHLTVYAF 437
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW+R E+S+L ++++ L G L +++++R +G+ L +D++ VL+ E
Sbjct: 438 STENWKRSPDEVSKLFAIMRAELLDG--ELLDHDVRLRWVGSPDGLPEDVVEVLRAQEHA 495
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
TR TGL + NY R E++RA + + +G V + L A +L +PD D
Sbjct: 496 TRNRTGLTFNVCVNYGGRAELARAGAALARAAVAGEVDPARISEQLFAAHLPHHALPDVD 555
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
L+ RT GE R S+FL W Y+E F E WP+ R + A+ Y R RR G S
Sbjct: 556 LLWRTSGEIRTSNFLPWHAHYAELHFTDEPWPEVDRRDLWEAVVAYTHRKRRKGAAS 612
>gi|120405614|ref|YP_955443.1| undecaprenyl diphosphate synthase [Mycobacterium vanbaalenii PYR-1]
gi|119958432|gb|ABM15437.1| Undecaprenyl pyrophosphate synthetase [Mycobacterium vanbaalenii
PYR-1]
Length = 265
Score = 238 bits (607), Expect = 6e-61, Method: Composition-based stats.
Identities = 82/237 (34%), Positives = 121/237 (51%), Gaps = 8/237 (3%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S P HI ++ DGN RWA G G+R G E++ E GI+ T++ S
Sbjct: 31 SELPRHIAVLCDGNRRWARESGHDDVSYGYRAGARKIAEMLRWCQEAGIEMATVYLLSTE 90
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
N +R E+S L+++I +++ N VR +G+ + ++ L++A T
Sbjct: 91 NLQRDTEELSALIEIITEVVEE--ICAPANQWSVRTVGDLELIGEESARRLRDAVSSTDG 148
Query: 127 NTG-LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSDVPD 181
N G ++ +A Y R EI A++ + + + V + I++ L TS PD
Sbjct: 149 NGGTFHVNVAVGYGGRQEIVDAVRALLSKELANGLTGEQLIESVTAEAISENLYTSGQPD 208
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PDL+IRT GE+RLS FLLWQ AYSE F YWP+F R F AL Y+ R RR+G
Sbjct: 209 PDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAYWPEFRRVDFLRALRDYSARHRRYGR 265
>gi|203284045|ref|YP_002221785.1| undecaprenyl diphosphate synthase [Borrelia duttonii Ly]
gi|201083488|gb|ACH93079.1| undecaprenyl diphosphate synthase [Borrelia duttonii Ly]
Length = 230
Score = 238 bits (607), Expect = 6e-61, Method: Composition-based stats.
Identities = 94/234 (40%), Positives = 137/234 (58%), Gaps = 4/234 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M S+S P H+GIIMDGN RWA +GL GH++G++ EIV + E+GIK L+++ FS
Sbjct: 1 MSSNSLPSHVGIIMDGNRRWALKKGLSFFEGHKEGLKRAKEIVKHSCELGIKCLSLYVFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW R SEI L+ LI +L F +NNI+V V G+ +L + +++A + T
Sbjct: 61 TENWNRTNSEIEHLMFLIADYLSSEFKFYAENNIRVVVSGDIETLSQKVKKSIEDATNYT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ GL L +A NY R+EI RAIK + + ++ AK+LD ++ D DL
Sbjct: 121 KNFDGLILNLAINYGGRNEIVRAIKKVLAK----GLSVETLNEVEFAKFLDNQELGDLDL 176
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+IRTGG+ R+S+FLLW++AY EF+F WPD+ + L + R R FG
Sbjct: 177 LIRTGGDMRVSNFLLWRLAYCEFIFSNVLWPDYFVFHYERDLECFKNRKRNFGR 230
>gi|299137314|ref|ZP_07030496.1| undecaprenyl diphosphate synthase [Acidobacterium sp. MP5ACTX8]
gi|298600719|gb|EFI56875.1| undecaprenyl diphosphate synthase [Acidobacterium sp. MP5ACTX8]
Length = 264
Score = 238 bits (607), Expect = 6e-61, Method: Composition-based stats.
Identities = 100/229 (43%), Positives = 143/229 (62%), Gaps = 1/229 (0%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA RGLPR AGHR G +V A ++GI+ LT++AFS +NWRRPV
Sbjct: 23 HVAIIMDGNGRWATQRGLPRIAGHRAGGAAARRVVEHAMDMGIRCLTLYAFSSDNWRRPV 82
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+ + L+++FL+ +K ++++ IG R L +L + +AED T T L+L
Sbjct: 83 LEVHRIFWLLRAFLRLERERFRKRGVRLQAIGRRDRLPKVLLREINDAEDATAGGTRLHL 142
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A +YSSRD+I+RA + S S ++ ++A+ L + D DL+IRTGGEK
Sbjct: 143 RVALDYSSRDDITRAAMRASSKVCDSSELSAEMLGQMLAEELK-AGNGDVDLLIRTGGEK 201
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
RLSDFLLW+ AY+E +F WPDF AL ++ R+RRFGG+ +
Sbjct: 202 RLSDFLLWESAYAELLFTDRMWPDFDAADLEAALEEFRHRERRFGGVPE 250
>gi|167042193|gb|ABZ06926.1| putative undecaprenyl diphosphate synthase [uncultured marine
crenarchaeote HF4000_ANIW93H17]
Length = 263
Score = 238 bits (607), Expect = 6e-61, Method: Composition-based stats.
Identities = 81/242 (33%), Positives = 129/242 (53%), Gaps = 4/242 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ ++ P+HI I++DGN RWA + + GH KG + ++ E IK +T+
Sbjct: 22 LEKEVVKGDRPNHIAIVLDGNRRWAKRNLVMQTHGHFKGADAVENLLDWCEEFDIKIITL 81
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+ S N R E+ + LIK+ L+K + + KN ++V+ IG L D I VL
Sbjct: 82 YVLSAENLDRKNEELDYIYDLIKTRLEKLYNDPRIHKNEMRVKGIGRIELLPDSIKDVLS 141
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
++ T+ + L IA Y ++E+ A++ I I+ G + D+ +I + L TS
Sbjct: 142 RLDNATKDYSNHFLNIAIAYGGQNELVDAVRKIGTKIKEGKLDVKDITKDVIEENLYTSH 201
Query: 179 VPDP--DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
+P P D+I+RT GEKR+S FL+WQ AYSE VF+ +WP+F + A+ + R RR
Sbjct: 202 LPQPSADMILRTSGEKRMSGFLMWQSAYSELVFLDVFWPEFRKIDLMRAIRTFQKRKRRT 261
Query: 237 GG 238
G
Sbjct: 262 GK 263
>gi|126328611|ref|XP_001363623.1| PREDICTED: similar to dehydrodolichyl diphosphate synthase isoform
2 [Monodelphis domestica]
Length = 334
Score = 238 bits (607), Expect = 7e-61, Method: Composition-based stats.
Identities = 82/229 (35%), Positives = 131/229 (57%), Gaps = 3/229 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IMDGN R+A + R GH +G + E + +GI+ +T++AFS
Sbjct: 20 IKAGPMPKHIAFIMDGNRRYAQKCQVERQEGHSQGFDKLAETLRWCLNLGIREVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSF---LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R +E+ L++L + L + L+K+ + +RV+G+ L D+ ++ +A
Sbjct: 80 IENFKRSKNEVDGLMELARQKFTRLMEEQEKLEKHGVCIRVLGDLQLLPLDLQELIAKAV 139
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T + L + F Y+SR EIS A+K + +E G + DV SL+ K L T++ P+
Sbjct: 140 QATHNYSKCFLNVCFAYTSRHEISNAVKEMAWGVEQGLLDPSDVSESLLDKCLYTNNSPN 199
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
PD++IRT GE RLSDFLLWQ ++S VF P WP++S A+ Q+
Sbjct: 200 PDILIRTSGEVRLSDFLLWQTSHSCLVFQPILWPEYSFWNLCEAILQFQ 248
>gi|126328609|ref|XP_001363539.1| PREDICTED: similar to dehydrodolichyl diphosphate synthase isoform
1 [Monodelphis domestica]
Length = 333
Score = 237 bits (606), Expect = 7e-61, Method: Composition-based stats.
Identities = 82/229 (35%), Positives = 131/229 (57%), Gaps = 3/229 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IMDGN R+A + R GH +G + E + +GI+ +T++AFS
Sbjct: 20 IKAGPMPKHIAFIMDGNRRYAQKCQVERQEGHSQGFDKLAETLRWCLNLGIREVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSF---LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R +E+ L++L + L + L+K+ + +RV+G+ L D+ ++ +A
Sbjct: 80 IENFKRSKNEVDGLMELARQKFTRLMEEQEKLEKHGVCIRVLGDLQLLPLDLQELIAKAV 139
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T + L + F Y+SR EIS A+K + +E G + DV SL+ K L T++ P+
Sbjct: 140 QATHNYSKCFLNVCFAYTSRHEISNAVKEMAWGVEQGLLDPSDVSESLLDKCLYTNNSPN 199
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
PD++IRT GE RLSDFLLWQ ++S VF P WP++S A+ Q+
Sbjct: 200 PDILIRTSGEVRLSDFLLWQTSHSCLVFQPILWPEYSFWNLCEAILQFQ 248
>gi|218532319|ref|YP_002423135.1| undecaprenyl pyrophosphate synthase [Methylobacterium
chloromethanicum CM4]
gi|218524622|gb|ACK85207.1| undecaprenyl diphosphate synthase [Methylobacterium
chloromethanicum CM4]
Length = 236
Score = 237 bits (606), Expect = 7e-61, Method: Composition-based stats.
Identities = 99/228 (43%), Positives = 133/228 (58%), Gaps = 11/228 (4%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H IIMDGNGRWA+ARGLPR AGHR G++ +V AA +GI LT++AFS +NWRRP
Sbjct: 12 HAAIIMDGNGRWASARGLPRGAGHRAGVKTIQRVVEAAPALGIGTLTLYAFSSDNWRRPA 71
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+ L++L++++L+ L ++ ++ VIG R L I ++ AE T L+L
Sbjct: 72 EEVGGLMRLLRAYLRGETDRLARSGTRLTVIGRRDRLPPGIPEAIERAEAATASGDRLHL 131
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA +YSSRD I A + + S S + + D DL+IRTGGEK
Sbjct: 132 RIAVDYSSRDAILAAAARLGPEGLSREGLSEALGAD-----------GDVDLLIRTGGEK 180
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RLSDFLLW+ AY+E F WPDF A+ + RDRRFGGL+
Sbjct: 181 RLSDFLLWEAAYAELHFTDRMWPDFGATDLAAAVADFTARDRRFGGLN 228
>gi|157164000|ref|YP_001466585.1| di-trans,poly-cis-decaprenylcistransferase [Campylobacter concisus
13826]
gi|112800724|gb|EAT98068.1| di-trans,poly-cis-decaprenylcistransferase [Campylobacter concisus
13826]
Length = 223
Score = 237 bits (606), Expect = 8e-61, Method: Composition-based stats.
Identities = 89/228 (39%), Positives = 131/228 (57%), Gaps = 9/228 (3%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+H+ IIMDGNGRWA RG R GH G V +++ + G+K L+++AFS NW+RP
Sbjct: 5 NHLAIIMDGNGRWAKKRGFLRTNGHEAGANVVSDMCEFCIDNGVKILSLYAFSTENWKRP 64
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E+ L+ L+K FL KN IK IG+ D++ ++ ++ TR NT L
Sbjct: 65 QKEVDFLMNLLKKFLLLKRDDFIKNGIKFNTIGDISPFSDELKNEIEITKNATRENTNLL 124
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L +A NY S+DEI RAIK + +++ + + LD S+ DL+IRTGGE
Sbjct: 125 LNLAINYGSKDEIIRAIKKLNLKGC-------EINETSLNAALDESE--PVDLLIRTGGE 175
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLS+F+LWQ +Y+E F P WPDF ++ + ++ +RRFGG+
Sbjct: 176 SRLSNFMLWQASYAELFFTPTLWPDFGKDELASIVAKFKDIERRFGGV 223
>gi|42559834|sp|Q8PZ76|UPPS_METMA RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
Length = 298
Score = 237 bits (606), Expect = 8e-61, Method: Composition-based stats.
Identities = 83/240 (34%), Positives = 129/240 (53%), Gaps = 7/240 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ ++SS P+HI +IMDGN R+A G R GH G EV +++ E+G+K LT+
Sbjct: 17 LEKEILSSEIPEHIAVIMDGNRRYAGQLGKARIFGHAMGAEVTEQVIEWCYEIGVKQLTL 76
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFS N++R E+ L LI K + ++VRVIG+R L + +
Sbjct: 77 YAFSTENFQRSEEEVGGLFNLINEKFLKLHTDKRTYEKEMQVRVIGDRTKLPAYLNESID 136
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS- 177
E T + +L +A Y R +I +A+++I + SG + DV+ SLI+K+L +
Sbjct: 137 RIEKATEHHRKFSLNVAIAYGGRQDIMQAVRDIATCVSSGKLSLEDVNESLISKHLYPAP 196
Query: 178 --DVPDPDLIIRTGGEKRLSDFLLWQVAYSEF--VFIPEYWPDFSRELFFHALNQYNLRD 233
VP+ DLIIRTGG++R+S+FL WQ SE F +WP+F + ++ Y R
Sbjct: 197 GVPVPNVDLIIRTGGDERISNFLPWQANGSECATYFCAPFWPEFRKIDLLRSVRVYQARK 256
>gi|154507710|ref|ZP_02043352.1| hypothetical protein ACTODO_00191 [Actinomyces odontolyticus ATCC
17982]
gi|153797344|gb|EDN79764.1| hypothetical protein ACTODO_00191 [Actinomyces odontolyticus ATCC
17982]
Length = 253
Score = 237 bits (606), Expect = 9e-61, Method: Composition-based stats.
Identities = 79/242 (32%), Positives = 129/242 (53%), Gaps = 7/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ A + ++ P HIG+I+DGN RWA + G GHR G +E + + + G+ +T+
Sbjct: 15 LKAELSDAAVPAHIGVILDGNRRWAKSLGATASQGHRAGAGKISEFLQWSDDAGVSIVTL 74
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N R E+ EL+++I + + K+ V+G+ L + + L+ +
Sbjct: 75 WLLSTDNLSRDAGELGELLRIICEAVSLLAD---QGRWKLAVVGDLSLLPEKVSEDLRAS 131
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLDT 176
+T G+ + IA Y R EI+ A++++ ++ + ++ + I +L T
Sbjct: 132 VARTADVQGMTVNIAVGYGGRHEITEAVRSMMREASAQGRTLDELADSFTDADITAHLYT 191
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
D PDPDL+IRT GE+RLS F+LWQ +SE+ F YWPDF R F AL Y R+RR
Sbjct: 192 KDQPDPDLVIRTSGEQRLSGFMLWQSVHSEYYFCEVYWPDFRRVDFLRALRSYAQRERRM 251
Query: 237 GG 238
G
Sbjct: 252 GK 253
>gi|118576653|ref|YP_876396.1| undecaprenyl pyrophosphate synthase [Cenarchaeum symbiosum A]
gi|118195174|gb|ABK78092.1| undecaprenyl pyrophosphate synthase [Cenarchaeum symbiosum A]
Length = 262
Score = 237 bits (605), Expect = 9e-61, Method: Composition-based stats.
Identities = 80/242 (33%), Positives = 125/242 (51%), Gaps = 4/242 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P H+ +I+DGN RWA AGH +G + ++ E IK +T+
Sbjct: 21 LEGEIRRGDIPRHVALILDGNRRWARRNLDFSGAGHTRGADAVENLLDWCEEFDIKIVTL 80
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+A S N R E+ L LI++ L+K + + + ++V+ +G + + + VL
Sbjct: 81 YALSAENLDRKDEELDLLYDLIRARLEKLYVDPRIHRMKMRVKAMGRKELMPPPVRDVLD 140
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
++ T+ L IA Y +DE+ A+K I + I+ G + + +D I L TS
Sbjct: 141 RLDEATKGYDEHFLNIAVAYGGQDEMLDAVKKIGKKIQDGELDADKIDKDEIESNLYTSH 200
Query: 179 VPD--PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
+P PD+I+RT GEKRLS FLLWQ AYSE VF+ +WPDF + A+ + R RR
Sbjct: 201 LPQSSPDMILRTSGEKRLSGFLLWQSAYSELVFMDVFWPDFRKIDLMRAIRMFQKRKRRI 260
Query: 237 GG 238
G
Sbjct: 261 GK 262
>gi|52548907|gb|AAU82756.1| undecaprenyl pyrophosphate synthetase [uncultured archaeon
GZfos19C8]
Length = 322
Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats.
Identities = 80/247 (32%), Positives = 129/247 (52%), Gaps = 14/247 (5%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + P+H+ IIMDGN R+A G+ G+ G E+ ++ EVG+K LTI
Sbjct: 35 LADEVRERNLPEHVAIIMDGNRRYAKKIGISTEEGYLYGAEITEHVIEWCFEVGVKQLTI 94
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFSI N+ R E L KL++ +K + K ++V+ IG+ L D + ++
Sbjct: 95 YAFSIENFCRSAEEKERLFKLMRVEFEKISKDERVHKRGVRVKAIGDLNLLPDSVKEAIQ 154
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
+AE +T LF+A YS R EI +++ I + ++ GS+ ++D I+K+L S+
Sbjct: 155 KAEQETAHYNSFKLFVAVAYSGRMEIVDSVRIIAEMVKRGSLSVEEIDEETISKHLYISE 214
Query: 179 V----------PDPDLIIRTGGEKRLSDFLLWQVAYSEF--VFIPEYWPDFSRELFFHAL 226
+ DLIIRTGGE RLS+F+ WQ +E F +WP+F + A+
Sbjct: 215 IEAGDSDSGAKASVDLIIRTGGEMRLSNFVPWQALGNECAAYFCAPFWPEFRKIDLLRAI 274
Query: 227 NQYNLRD 233
Y R+
Sbjct: 275 RTYQERE 281
>gi|195131549|ref|XP_002010213.1| GI14820 [Drosophila mojavensis]
gi|193908663|gb|EDW07530.1| GI14820 [Drosophila mojavensis]
Length = 304
Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats.
Identities = 80/240 (33%), Positives = 131/240 (54%), Gaps = 9/240 (3%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
++ P+HI +MDGN R+A ++ L + GH +G +++ ++GIK +T FAFSI
Sbjct: 22 LTGRIPNHIAFVMDGNRRFARSKQLDKIEGHSRGFSKLADVLRWCVDLGIKEVTTFAFSI 81
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
N++R E+ L L + K L ++ I++RVIGN L L +D+ + A
Sbjct: 82 ENFKRSNEEVEGLFNLAREKFAKLLEETNRLNEHGIRIRVIGNILLLPEDLQRHIATAML 141
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVC---SHDVDSSLIAKYLDTSDV 179
+T N L L +AF Y+SRDE+++A++++ ++ ES D++ L+ + L T
Sbjct: 142 RTEHNDKLFLNVAFAYTSRDEMTQAVESVLKNDESADDEPLHPSDINERLLEECLYTRHS 201
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN---LRDRRF 236
P PD++ RT GE RLSDF++WQ++ S F WP + F ++ Y R RF
Sbjct: 202 PPPDMVFRTSGETRLSDFMMWQLSSSVLYFTDVLWPQITIWNFLASIVAYQCDRCRMERF 261
>gi|170738812|ref|YP_001767467.1| undecaprenyl pyrophosphate synthase [Methylobacterium sp. 4-46]
gi|168193086|gb|ACA15033.1| undecaprenyl diphosphate synthase [Methylobacterium sp. 4-46]
Length = 238
Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats.
Identities = 94/227 (41%), Positives = 131/227 (57%), Gaps = 7/227 (3%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ +IMDGNGRWA ARGLPR AGHR G+E + AA ++G+ LT+FAFS +NWRRP
Sbjct: 12 HVAMIMDGNGRWATARGLPRSAGHRAGVEAIRRVAEAAPDLGVGTLTLFAFSSDNWRRPP 71
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+E++ L+ L++ +L++ L + ++ VIG R L + L AE +T L+L
Sbjct: 72 AEVAALMGLLRRYLRRETERLARTGTRLTVIGRRDRLPAGLPGALARAEAETAGGARLHL 131
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA +YS+R + + + L + VPD DL+IR+GGEK
Sbjct: 132 RIAVDYSAR------DAILAAAAGAPGADVGAESREAFGRRL-SGGVPDVDLMIRSGGEK 184
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLSDFLLW+ AY+E F WPDF + AL + R+RRFGGL
Sbjct: 185 RLSDFLLWECAYAELHFTDRMWPDFGGDDLAAALRDFTRRERRFGGL 231
>gi|301165593|emb|CBW25164.1| undecaprenyl pyrophosphate synthetase [Bacteriovorax marinus SJ]
Length = 251
Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats.
Identities = 94/229 (41%), Positives = 134/229 (58%), Gaps = 5/229 (2%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
HI IIMDGNGRWA +R R GH +G ++ + IV A ++G K LT++AFS NW RP
Sbjct: 7 KHIAIIMDGNGRWAQSRSHERIWGHIRGSKIVSNIVEEADDLGAKALTLYAFSTENWSRP 66
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
V E+ L KL+K FL K + KNNI+ +V+G+ L + ++ E E+ ++ N GL
Sbjct: 67 VGEVKVLFKLLKKFLLKERNRILKNNIQFKVMGDITKLPEKTQSLIAELENDSKDNKGLK 126
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L AF Y RDEI +A ++ ++ L+ YL + D DL+IRTGG+
Sbjct: 127 LTFAFGYGGRDEIVQAANKFIKENPGK-----ELTEELLQSYLLMPHLGDVDLLIRTGGD 181
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
+R+S+FLLWQ AY+E F WPDF+R+ F + R+RRFG +
Sbjct: 182 QRISNFLLWQSAYAELYFTQTKWPDFTRKEFKEIFEFVSKRERRFGNVC 230
>gi|217032233|ref|ZP_03437731.1| hypothetical protein HPB128_2g35 [Helicobacter pylori B128]
gi|216946104|gb|EEC24715.1| hypothetical protein HPB128_2g35 [Helicobacter pylori B128]
Length = 223
Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats.
Identities = 82/223 (36%), Positives = 128/223 (57%), Gaps = 1/223 (0%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP SE+
Sbjct: 1 MDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPKSEVDF 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+K++K +LK + NNI+ R IG+ ++ + + E TR +A N
Sbjct: 61 LMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLESDTRHFKDFTQVLALN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y S++E+SRA + ++ + + I+ LDT D+P+ DL++RTGGE RLS+F
Sbjct: 121 YGSKNELSRA-FKSLLENPPNNIDPLESLENEISNRLDTRDLPEVDLLLRTGGEMRLSNF 179
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 180 LLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELK 222
>gi|195048163|ref|XP_001992481.1| GH24772 [Drosophila grimshawi]
gi|193893322|gb|EDV92188.1| GH24772 [Drosophila grimshawi]
Length = 308
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 76/239 (31%), Positives = 125/239 (52%), Gaps = 11/239 (4%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
++ P HI +MDGN R+A ++ + + GH G +++ ++GI+ +T FAFSI
Sbjct: 22 LTGYVPHHIAFVMDGNRRFARSKHIDKIEGHSLGFAKLADVLRWCLDMGIREVTTFAFSI 81
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
N++R E+ L L + L ++ I++RVIGN L D+ ++ A
Sbjct: 82 ENFKRSSEEVEGLFNLAREKFSTLLAETSRLDEHGIQIRVIGNIELLPKDLQRLVATAML 141
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIE-------SGSVCSHDVDSSLIAKYLD 175
+T N L L +AF Y+SRDEI++A++ + ++ ++ D++ L+ L
Sbjct: 142 RTERNDKLFLNVAFAYTSRDEITQAVEAVLKNNNDDDDDEGQDALQPTDINERLLEACLY 201
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
T P PDL+ RT GE RLSDF++WQ++ S F WP + F ++ Y RDR
Sbjct: 202 TRHSPPPDLVFRTSGETRLSDFMMWQLSTSVLYFTDVLWPQITIWNFLASIVAYQ-RDR 259
>gi|167044307|gb|ABZ08986.1| putative undecaprenyl diphosphate synthase [uncultured marine
crenarchaeote HF4000_APKG6B14]
Length = 263
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 81/242 (33%), Positives = 129/242 (53%), Gaps = 4/242 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ ++ P+HI I++DGN RWA + + GH KG + ++ E IK +T+
Sbjct: 22 LEKEVVKGDRPNHIAIVLDGNRRWAKRNLVMQTHGHFKGADAVENLLDWCEEFDIKIITL 81
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+ S N R E+ + LIK+ L+K + + KN ++V+ IG L D I VL
Sbjct: 82 YVLSAENLDRKNEELDYIYDLIKTRLEKLYNDPRIHKNEMRVKGIGRIELLPDSIKDVLS 141
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
++ T+ + L IA Y ++E+ A++ I I+ G + D+ +I + L TS
Sbjct: 142 RLDNATKDYSNHFLNIAIAYGGQNELVDAVRKIGTKIKEGKLDVKDITKDVIEENLYTSH 201
Query: 179 VPDP--DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
+P P D+I+RT GEKR+S FL+WQ AYSE VF+ +WP+F + A+ + R RR
Sbjct: 202 LPQPSADMILRTSGEKRMSGFLMWQSAYSELVFLDVFWPEFRKIDLMRAIRTFQKRKRRA 261
Query: 237 GG 238
G
Sbjct: 262 GK 263
>gi|195480296|ref|XP_002101214.1| GE17496 [Drosophila yakuba]
gi|194188738|gb|EDX02322.1| GE17496 [Drosophila yakuba]
Length = 300
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 78/228 (34%), Positives = 123/228 (53%), Gaps = 5/228 (2%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ +MDGN R+A ++ + + GH +G E + + +VG++ +T FAFSI N++
Sbjct: 26 IPHHVAFVMDGNRRFARSQQIDKIEGHSRGFEKLADCLRWCLDVGVREVTTFAFSIENFK 85
Query: 70 RPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
R E+ L L + + L ++ I++RVIGN L D+ ++ A T
Sbjct: 86 RSNEEVEGLFNLAREKFARLLEETARLDEHGIRIRVIGNIELLPLDLQKLVASAMLSTEC 145
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N L L +AF Y+SRDEI++A++ I + S + D+ L+ + L T P PDL+
Sbjct: 146 NDKLFLNVAFAYTSRDEITQAVETILRHG-SQDLAGEDISERLLEECLYTRHSPPPDLVF 204
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
RT GE RLSDF++WQ++ S F WP + F ++ Y RDR
Sbjct: 205 RTSGETRLSDFMMWQLSTSVLYFSNVLWPQITFWHFLASILAYQ-RDR 251
>gi|218199994|gb|EEC82421.1| hypothetical protein OsI_26813 [Oryza sativa Indica Group]
Length = 299
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 70/245 (28%), Positives = 118/245 (48%), Gaps = 14/245 (5%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+VA + P HI IMDGN R+A R + +GHR G + E+G+K +T+
Sbjct: 39 IVAVLSYGPMPKHIAFIMDGNRRYAKFRSIQEGSGHRMGFSALIASLLYCYEMGVKYITV 98
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI+N++R +E+ L++L++ + + + + K N K+ G L + +
Sbjct: 99 YAFSIDNFKRDPTEVKSLMELMEEKINELLENRNVINKVNCKINFWGKLDMLSEPVRVAA 158
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSH-----------DVD 166
++ T N GL + Y+S EI A+ + + D+
Sbjct: 159 EKLMASTAENKGLVFSVCMPYNSTSEIVIAVNKVCAERRDILQREDVDSVANYGVHSDIS 218
Query: 167 SSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHAL 226
+ + ++ ++ PDPD++IRT GE RLS+FLLWQ +S WP+FS + A+
Sbjct: 219 VADLDHHMYSAGCPDPDIVIRTSGETRLSNFLLWQTTFSHLQNPDPLWPEFSFKHLVWAI 278
Query: 227 NQYNL 231
QY
Sbjct: 279 LQYQR 283
>gi|195355990|ref|XP_002044466.1| GM11961 [Drosophila sechellia]
gi|194131631|gb|EDW53673.1| GM11961 [Drosophila sechellia]
Length = 300
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 78/230 (33%), Positives = 123/230 (53%), Gaps = 5/230 (2%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
P H+ +MDGN R+A ++ + + GH +G E + + +VG++ +T FAFSI N
Sbjct: 24 GHIPHHVAFVMDGNRRFARSQQIDKIEGHSRGFEKLADCLRWCLDVGVREVTTFAFSIEN 83
Query: 68 WRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
++R E+ L L + + L ++ I++RVIGN L D+ ++ A T
Sbjct: 84 FKRSNEEVEGLFNLAREKFARLLEETARLDEHGIRIRVIGNIELLPLDLQKLVASAMLST 143
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N L L +AF Y+SRDEI++A++ I + S + D+ L+ + L T P PDL
Sbjct: 144 ERNDKLFLNVAFAYTSRDEITQAVETILRHG-SQDLAGEDISERLLEECLYTRHSPPPDL 202
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
+ RT GE RLSDF++WQ++ S F WP + F ++ Y RDR
Sbjct: 203 VFRTSGETRLSDFMMWQLSTSVLYFSNVLWPQITFWHFLASILAYQ-RDR 251
>gi|187917998|ref|YP_001883561.1| undecaprenyl pyrophosphate synthase [Borrelia hermsii DAH]
gi|119860846|gb|AAX16641.1| undecaprenyl pyrophosphate synthetase [Borrelia hermsii DAH]
Length = 230
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 94/234 (40%), Positives = 136/234 (58%), Gaps = 4/234 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M S+S P H+GIIMDGN RWA +GL GH++G++ EIV + ++GIK L+++ FS
Sbjct: 1 MSSNSLPMHVGIIMDGNRRWALKKGLSFFEGHKEGLKRAKEIVKHSLKLGIKYLSLYVFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW R SEI L+ LI +L F NNIK+ V G+ +L + + + +A + T
Sbjct: 61 TENWNRTKSEIEYLMFLIADYLSSEFEFYSANNIKILVSGDIEALSEKVRKSIIDAIEFT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
R GL L +A NY R+EI RA K I +D + +K+LD ++ D +L
Sbjct: 121 RNFDGLMLNLAINYGGRNEIVRATKKILGSGLQFGT----LDEVVFSKFLDNPELCDLEL 176
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+IRTGG+ R+S+FLLW++AY EFVF WP++S + L + R R FG
Sbjct: 177 LIRTGGDMRISNFLLWKIAYCEFVFSSALWPEYSISHYDRDLECFKNRKRNFGR 230
>gi|147918805|ref|YP_687470.1| putative undecaprenyl pyrophosphate synthetase [uncultured
methanogenic archaeon RC-I]
gi|110622866|emb|CAJ38144.1| putative undecaprenyl pyrophosphate synthetase [uncultured
methanogenic archaeon RC-I]
Length = 318
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 71/240 (29%), Positives = 114/240 (47%), Gaps = 6/240 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M ++ P HI IIMDGN R+A G GH G + ++ ++ ++ LT+
Sbjct: 21 MKREILKGPIPQHIAIIMDGNRRYAKRMGEVVEKGHMLGADTTERVIQWCEQLRVRQLTL 80
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLK--KGFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
++FS N++R E + LIK L+ + K I++ IG+ L DD+ ++
Sbjct: 81 YSFSTENFQRNEREKKAIFNLIKDKLRKSRESPETHKYKIRINCIGDMDMLPDDMREEIR 140
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT-- 176
E + T L +A Y R EI I + +++ + ++ I +YL
Sbjct: 141 ETHNATGKYDNFFLNVALAYGGRKEIVDGAARIAEKVKAREMNPEEITEDTIDQYLYFDK 200
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEF--VFIPEYWPDFSRELFFHALNQYNLRDR 234
DLIIRTGG++R S+FL WQ + +E YWP+F + F+ A+ Y RDR
Sbjct: 201 KQKSSVDLIIRTGGDERTSNFLPWQASGNECAIYISAPYWPEFRKIDFYRAIRAYQNRDR 260
>gi|227494767|ref|ZP_03925083.1| undecaprenyl pyrophosphate synthetase [Actinomyces coleocanis DSM
15436]
gi|226831767|gb|EEH64150.1| undecaprenyl pyrophosphate synthetase [Actinomyces coleocanis DSM
15436]
Length = 263
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 80/252 (31%), Positives = 129/252 (51%), Gaps = 17/252 (6%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P H+G+I+DGN RWA A G GHRKG + E + A E G++ +T+
Sbjct: 15 LSHGLNPERIPAHVGVILDGNRRWAKAVGNATSYGHRKGADKITEFLGWAREFGVQVVTL 74
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLK-- 118
+ S +N R +E++ L+ +I ++ +V+V+G+ L + + L
Sbjct: 75 WMLSTDNLSRSEAELAPLLSIIVDATRE---IAANPEYRVQVVGDLNLLPEGVASELSQI 131
Query: 119 --------EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VD 166
+AE + + L + +A Y R EI+ A++++ + + +
Sbjct: 132 VAASAALGDAEGFYQGSLRLTVNVAIGYGGRHEITDAVRSLLRSYAERGMTLEQAADVLT 191
Query: 167 SSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHAL 226
I+++L T+ VPDPDL+IRT GE+RLS F+LWQ +SEF F +WPDF R F AL
Sbjct: 192 IDDISEHLYTAGVPDPDLLIRTSGEQRLSGFMLWQSVHSEFYFCEAFWPDFRRVDFLRAL 251
Query: 227 NQYNLRDRRFGG 238
Y R+RR G
Sbjct: 252 RDYGQRERRLGK 263
>gi|158314885|ref|YP_001507393.1| undecaprenyl diphosphate synthase [Frankia sp. EAN1pec]
gi|158110290|gb|ABW12487.1| undecaprenyl diphosphate synthase [Frankia sp. EAN1pec]
Length = 258
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 82/245 (33%), Positives = 128/245 (52%), Gaps = 8/245 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLP-RCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ AS+ + P H+G+IMDGN RWA G+ GH+ G + ++++ GIK++T
Sbjct: 15 LRASLKGAELPRHVGLIMDGNRRWARQMGMANPSLGHKFGADHVEDVLSWCEAAGIKHVT 74
Query: 60 IFAFSINNW-RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+F S N R +EI+ L+++I+ + + ++ + G +L D LK
Sbjct: 75 VFVCSTENLAHREDAEIAFLMRVIEQVVSDKIAT-PDPAWQMHIAGLLDALPDSTARALK 133
Query: 119 EAEDQTRLN-TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVC----SHDVDSSLIAKY 173
AE+ TR TG ++ +A Y R E+ A + + + + + + +A++
Sbjct: 134 NAEEVTRSCSTGAHVTLAVGYGGRQEVVDAFRALLHEQAETGGSLADLAETLTAEDVARH 193
Query: 174 LDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
L T+ PDPDL+IRT GE+R+S+FLLWQ AYSE F YWP F F AL Y R
Sbjct: 194 LYTAGQPDPDLVIRTSGEQRMSNFLLWQSAYSELYFCEAYWPAFREIDFLRALRSYAARG 253
Query: 234 RRFGG 238
RR G
Sbjct: 254 RRHGA 258
>gi|229819580|ref|YP_002881106.1| undecaprenyl diphosphate synthase [Beutenbergia cavernae DSM 12333]
gi|229565493|gb|ACQ79344.1| undecaprenyl diphosphate synthase [Beutenbergia cavernae DSM 12333]
Length = 257
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 79/242 (32%), Positives = 131/242 (54%), Gaps = 7/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ A++ + P H+GII+DGN RWA A G GHR+G + +++ + ++G++ +T+
Sbjct: 19 LEAALPREAVPHHVGIILDGNRRWARAGGNRAAHGHRRGADKIADVLGWSEDIGVQIVTL 78
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N R E+ EL+ +I+ + + ++RV+G L + L+ A
Sbjct: 79 WMLSTDNLARDPEEVGELLGIIEDAVAEL---ATSRRWRIRVVGALDLLPESTADRLRAA 135
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLDT 176
++ T G+ + +A Y R EI+ A++ + ++ ++ IA++L T
Sbjct: 136 QELTSDVEGMGVNVAIGYGGRREIADAVRGLLKEHALAGTSIDELAQTLTVEHIAEHLYT 195
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
PDPDL+IRT GE+RL FLLWQ +SEF F YWPDF R F A+ Y +R+RR
Sbjct: 196 KGQPDPDLVIRTSGEQRLGGFLLWQSVHSEFYFCEAYWPDFRRVDFLRAVRSYAMRERRM 255
Query: 237 GG 238
G
Sbjct: 256 GR 257
>gi|257057126|ref|YP_003134958.1| Undecaprenyl pyrophosphate synthetase [Saccharomonospora viridis
DSM 43017]
gi|256586998|gb|ACU98131.1| Undecaprenyl pyrophosphate synthetase [Saccharomonospora viridis
DSM 43017]
Length = 259
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 83/243 (34%), Positives = 123/243 (50%), Gaps = 8/243 (3%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAG-HRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P HIGII+DGN RWA G G HR G + + E ++ +T+
Sbjct: 19 LKQQAAGRHPRHIGIILDGNRRWAREAGFTDVNGGHRVGARKIADFLGWCREAKVEVVTL 78
Query: 61 FAFSINNW-RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
+ S +N R E++ L+++I + + N ++ ++G L D+ L
Sbjct: 79 WLLSTDNVRNRSSEEVAALLEIIPDVVDELAK--PGNPWRLSIVGALDMLPTDVAARLTA 136
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVC----SHDVDSSLIAKYLD 175
A +T G+ + +A Y R EI+ A++ + Q + +D IA++L
Sbjct: 137 AAQRTDGRNGMIVNVAVGYGGRQEIADAVRKLLQQHAEEGTSIQQLAETLDVDHIAEHLY 196
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
TS PDPDLIIRT GE+RLS FLLWQ A+SEF F YWP F + F AL Y +R RR
Sbjct: 197 TSGQPDPDLIIRTSGEQRLSGFLLWQSAHSEFWFTEAYWPAFRKVDFLRALRDYAVRHRR 256
Query: 236 FGG 238
+GG
Sbjct: 257 YGG 259
>gi|225712398|gb|ACO12045.1| Dehydrodolichyl diphosphate synthase [Lepeophtheirus salmonis]
Length = 265
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 73/234 (31%), Positives = 128/234 (54%), Gaps = 6/234 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+++ + + S P H+ IMDGN R+A + GH G + +E + ++GI+ +++
Sbjct: 20 LLSILRTGSLPRHVAFIMDGNRRFARKSKVELIKGHSSGFDKLSETLFWCRDLGIEEVSV 79
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKK---GFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++RP E+++L+ L +S +K + L + ++V+VIGN L +D+ V+
Sbjct: 80 YAFSIENFKRPQHEVNDLLDLARSKFQKLFSEIHRLAEKGVRVQVIGNLALLPEDLQEVI 139
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
++ + T+ ++ L +AF Y+SRDE++ AI++ ES S ++ + +
Sbjct: 140 RKCVESTKDHSKCTLNVAFAYTSRDELTTAIRSAV---ESEKDSSAHIEPKTLENHFYGK 196
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
DLIIRT GE RLSDF+LWQ +Y+ F WP+F + Y
Sbjct: 197 GRSQVDLIIRTSGEVRLSDFMLWQGSYAVTYFTKVLWPEFRLLNLMAGIFHYQH 250
>gi|203287585|ref|YP_002222600.1| undecaprenyl diphosphate synthase [Borrelia recurrentis A1]
gi|201084805|gb|ACH94379.1| undecaprenyl diphosphate synthase [Borrelia recurrentis A1]
Length = 230
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 96/234 (41%), Positives = 137/234 (58%), Gaps = 4/234 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M S+S P H+GIIMDGN RWA +GL GH++G++ EIV + E+GIK L+++ FS
Sbjct: 1 MSSNSLPSHVGIIMDGNRRWALKKGLSFFEGHKEGLKRAKEIVKHSCELGIKCLSLYVFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW R SEI L+ LI +L F +NNIKV V G+ +L + +K+A + T
Sbjct: 61 TENWNRTNSEIEHLMFLIADYLSSEFKFYAENNIKVVVSGDIKTLSQKVKKSIKDATNYT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ GL L +A NY R+EI RAIK + + ++ AK+LD ++ D DL
Sbjct: 121 KNFDGLILNLAINYGGRNEIVRAIKKVLAK----GLSVETLNEVEFAKFLDNQELGDLDL 176
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+IRTGG+ R+S+FLLW++AY EF+F WPD+ + L + R R FG
Sbjct: 177 LIRTGGDMRVSNFLLWRLAYCEFIFSNVLWPDYFVFHYERDLECFKNRKRNFGR 230
>gi|227828237|ref|YP_002830017.1| undecaprenyl diphosphate synthase [Sulfolobus islandicus M.14.25]
gi|227830995|ref|YP_002832775.1| undecaprenyl diphosphate synthase [Sulfolobus islandicus L.S.2.15]
gi|229579875|ref|YP_002838274.1| undecaprenyl diphosphate synthase [Sulfolobus islandicus Y.G.57.14]
gi|229581466|ref|YP_002839865.1| undecaprenyl diphosphate synthase [Sulfolobus islandicus Y.N.15.51]
gi|229585465|ref|YP_002843967.1| undecaprenyl diphosphate synthase [Sulfolobus islandicus M.16.27]
gi|238620429|ref|YP_002915255.1| undecaprenyl diphosphate synthase [Sulfolobus islandicus M.16.4]
gi|284998487|ref|YP_003420255.1| undecaprenyl diphosphate synthase [Sulfolobus islandicus L.D.8.5]
gi|227457443|gb|ACP36130.1| undecaprenyl diphosphate synthase [Sulfolobus islandicus L.S.2.15]
gi|227460033|gb|ACP38719.1| undecaprenyl diphosphate synthase [Sulfolobus islandicus M.14.25]
gi|228010590|gb|ACP46352.1| undecaprenyl diphosphate synthase [Sulfolobus islandicus Y.G.57.14]
gi|228012182|gb|ACP47943.1| undecaprenyl diphosphate synthase [Sulfolobus islandicus Y.N.15.51]
gi|228020515|gb|ACP55922.1| undecaprenyl diphosphate synthase [Sulfolobus islandicus M.16.27]
gi|238381499|gb|ACR42587.1| undecaprenyl diphosphate synthase [Sulfolobus islandicus M.16.4]
gi|284446383|gb|ADB87885.1| undecaprenyl diphosphate synthase [Sulfolobus islandicus L.D.8.5]
gi|323475304|gb|ADX85910.1| undecaprenyl diphosphate synthase [Sulfolobus islandicus REY15A]
gi|323478030|gb|ADX83268.1| undecaprenyl diphosphate synthase [Sulfolobus islandicus HVE10/4]
Length = 262
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 80/241 (33%), Positives = 123/241 (51%), Gaps = 3/241 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + PDH+GII DGN RWA L + G + E++ E+G+KN+T+
Sbjct: 22 LWNQIRNGPLPDHVGIIPDGNRRWARNNNLSLNDAYFYGYKKLKEVLIWLLELGVKNITV 81
Query: 61 FAFSINNW-RRPVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVL 117
FA S N +R SE+S + IK L++ + + +KV IG L D+ L
Sbjct: 82 FALSTENCEKRKQSELSIVTTYIKRGLQELLEDPIVDRYEVKVSAIGKLDKLPKDLTDYL 141
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+ ++T L +A Y R EI A+ + D +G + ++++ KY S
Sbjct: 142 NKVIEKTSNYDKRKLTLAICYGGRQEILDAVVRLLDDYRNGKISKNEINEETFRKYFYDS 201
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
++ D DL+IRT GE R+S+FLLW VAYSE F YWP+F + + A+ + R R FG
Sbjct: 202 ELHDIDLVIRTSGEVRISNFLLWHVAYSELFFCEAYWPEFRKIDLWRAIRSFQKRKRNFG 261
Query: 238 G 238
Sbjct: 262 A 262
>gi|227548187|ref|ZP_03978236.1| undecaprenyl pyrophosphate synthetase [Corynebacterium
lipophiloflavum DSM 44291]
gi|227079748|gb|EEI17711.1| undecaprenyl pyrophosphate synthetase [Corynebacterium
lipophiloflavum DSM 44291]
Length = 256
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 81/243 (33%), Positives = 120/243 (49%), Gaps = 7/243 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGL-PRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ + P HI ++ DGN RWA G GHR G E+V +AE+ I+ +T
Sbjct: 16 LRRDLRGEKRPRHIAVMADGNRRWARHVGYTDVSHGHRAGAAKIGELVRWSAEMDIEVVT 75
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
I+ S N +R E+ L +I + + +++++G+ L ++ ++
Sbjct: 76 IYLLSTENLQRTTEEVELLFDIISDVVADLAAE--DYSCRIKLVGHLELLPPEVAERMQR 133
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD----IESGSVCSHDVDSSLIAKYLD 175
+ T GL++ IA Y R EI A++ + D + + + V I + L
Sbjct: 134 SAAATSAKRGLSVNIAVGYGGRQEIVDAVRALIGDELAAGTAAADLASRVTIDSIGENLY 193
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
TS PDPDL+IRT GE+RLS FLLWQ AYSE F YWP F + F AL Y+ R RR
Sbjct: 194 TSGQPDPDLVIRTSGEQRLSGFLLWQAAYSEIWFTDTYWPAFRKIDFLRALRDYSQRSRR 253
Query: 236 FGG 238
FG
Sbjct: 254 FGK 256
>gi|317508404|ref|ZP_07966074.1| di-trans,poly-cis-decaprenylcistransferase [Segniliparus rugosus
ATCC BAA-974]
gi|316253251|gb|EFV12651.1| di-trans,poly-cis-decaprenylcistransferase [Segniliparus rugosus
ATCC BAA-974]
Length = 264
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 82/240 (34%), Positives = 125/240 (52%), Gaps = 7/240 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + P+HI ++ DGN RWA A G GHR G E ++ GI ++T++
Sbjct: 26 RQLRGARLPEHIAVLCDGNRRWARANGFSDVSHGHRVGALKIAEFLSWCDAEGIGHVTVW 85
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
S N RR E+S L+ +I + + N +VR++G L ++ L +
Sbjct: 86 LLSTENLRRDPEELSALLDIIHEVVAEL--CAPDKNWQVRIVGALEFLPEEFAANLVSSA 143
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTS 177
+T TG ++ +A Y R EIS A++++ D + + + +D + I ++L TS
Sbjct: 144 KKTVGRTGGHVNVAVGYGGRQEISDAVRSLVADRLASGLAGQELVDSIDVAAIGEHLYTS 203
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDPDL+IRT GE+RLS FLLWQ +SE F +WP+F R F A+ Y R RRFG
Sbjct: 204 GQPDPDLVIRTSGEQRLSGFLLWQSVHSEIWFTEAFWPEFRRVDFLRAMRDYAARHRRFG 263
>gi|50955271|ref|YP_062559.1| undecaprenyl pyrophosphate synthetase [Leifsonia xyli subsp. xyli
str. CTCB07]
gi|50951753|gb|AAT89454.1| undecaprenyl pyrophosphate synthetase [Leifsonia xyli subsp. xyli
str. CTCB07]
Length = 264
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 82/242 (33%), Positives = 130/242 (53%), Gaps = 9/242 (3%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTI 60
+A++ + P H+ +I+DGN RWA GL A GHR G E + ++GI +T+
Sbjct: 25 LAALGVEALPKHVAMIIDGNRRWARQAGLTTVAHGHRAGAAKMREFLKWCDDLGIAVVTL 84
Query: 61 FAFSINNW-RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
+ S +N R +E+++L+++I + + + +V+ +G+ L D + L
Sbjct: 85 YLLSSDNLTNRESAELADLIEIIAELAE---DLSRYRHWRVKHVGSAAGLSDPLGAALTG 141
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLD 175
AED+T N G+++ +A Y R EI+ AI++I ++ + I +L
Sbjct: 142 AEDRTAANEGMHINLAVGYGGRKEITDAIRSIVAAHQAEGGSLETLADLLTPDFIGAHLY 201
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
T PDPDL+IRT GE+RLSDF+LWQ A+SEF F+ PD F A+ Y+ R RR
Sbjct: 202 TGGQPDPDLVIRTSGEQRLSDFMLWQSAHSEFYFVEALGPDLREVDFLRAVRDYSRRQRR 261
Query: 236 FG 237
FG
Sbjct: 262 FG 263
>gi|8843799|dbj|BAA97347.1| undecaprenyl pyrophosphate synthetase-like [Arabidopsis thaliana]
Length = 226
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 91/231 (39%), Positives = 125/231 (54%), Gaps = 11/231 (4%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ +IMDGN RWA GL G+ G + E ++GI ++ FAFS NW
Sbjct: 1 MPRHVAVIMDGNRRWAKQTGLLTSQGYEAGAKRLLEFADLCFKLGINTVSAFAFSTENWG 60
Query: 70 RPVSE-ISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
R S I++ V K I+V VIGN + + +L + E E+ T+
Sbjct: 61 RHKSFSIAQFVTNNLVCFSKE--------IRVSVIGNLAKIPESLLRTVHELEEATKSYK 112
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS--DVPDPDLII 186
+L +A +YS R +I A KNI + E G + DVD +L + L T + P PDL+I
Sbjct: 113 KKHLILAIDYSGRFDILGACKNIVKKSEQGLIREEDVDETLFERELQTRCTEFPSPDLLI 172
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE+R+S+F LWQ+AY+EF F P WPDF ++ F AL Y RDRRFG
Sbjct: 173 RTSGEQRISNFFLWQLAYTEFFFSPVLWPDFDKQKFIEALVSYQRRDRRFG 223
>gi|15828335|ref|NP_302598.1| undecaprenyl pyrophosphate synthetase [Mycobacterium leprae TN]
gi|221230812|ref|YP_002504228.1| putative undecaprenyl pyrophosphate synthetase [Mycobacterium
leprae Br4923]
gi|44888532|sp|Q9CB36|ZFPP_MYCLE RecName: Full=Short-chain Z-isoprenyl diphosphate synthase;
AltName: Full=(2Z,6E)-farnesyl diphosphate synthase;
AltName: Full=Z-FPP synthase; AltName: Full=Z-isoprenyl
diphosphate synthase
gi|13094028|emb|CAC31984.1| possible undecaprenyl pyrophosphate synthetase [Mycobacterium
leprae]
gi|219933919|emb|CAR72566.1| possible undecaprenyl pyrophosphate synthetase [Mycobacterium
leprae Br4923]
Length = 262
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 81/236 (34%), Positives = 120/236 (50%), Gaps = 7/236 (2%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S P HI ++ DGN RWA G G+R G E++ E GI+ T++ S
Sbjct: 29 SRLPRHIAVLCDGNRRWARDAGYDDVSYGYRMGAAKIAEMLRWCQEAGIEMTTVYLLSTE 88
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
N +R E++ L+++I +++ N VR +G+ L ++ C L+ A + T
Sbjct: 89 NLQRDPDELAALIEIITDVVEE--ICAPANRWSVRTVGDLELLGEEPACRLRGAVESTPG 146
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSDVPDP 182
++ +A Y R EI A++ + + + + V IA+ L TS PDP
Sbjct: 147 VAPFHVNVAVGYGGRREIVGAVRALLGKELANGATAEELVEAVTVEGIARNLYTSGQPDP 206
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DL+IRT GE+RLS FLLWQ AYSE F +WP F R F AL Y++R RR+G
Sbjct: 207 DLVIRTSGEQRLSGFLLWQSAYSEMWFTETHWPAFRRVDFLRALRDYSMRHRRYGK 262
>gi|170747236|ref|YP_001753496.1| undecaprenyl diphosphate synthase [Methylobacterium radiotolerans
JCM 2831]
gi|170653758|gb|ACB22813.1| undecaprenyl diphosphate synthase [Methylobacterium radiotolerans
JCM 2831]
Length = 240
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 96/240 (40%), Positives = 136/240 (56%), Gaps = 10/240 (4%)
Query: 5 MMSSSPPD--HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
M S + P H IIMDGNGRWA RGLPR AGH +G+E A + GI LT++A
Sbjct: 1 MQSEAVPGALHAAIIMDGNGRWATQRGLPRLAGHHRGVEAIRRTAEACPDHGIGTLTLYA 60
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS +NW+RP E+ L++L++S+L+ L + ++ V+G R L D I + AE
Sbjct: 61 FSADNWQRPAEEVGGLMRLLRSYLRNETQRLARTGTRLSVVGRRDRLPDGIPQAIAAAEA 120
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP-D 181
T T L+L I +YS+RD I A + + + + L+A + P D
Sbjct: 121 ATAGGTRLHLRICVDYSARDAIIAAAQGLAGEEPTRES-----FGKLVAGPM--HGSPVD 173
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
DL+IRTGGE+RLSDF+LW+ AY+E +F WPDF + A+ ++ R+RRFGGL
Sbjct: 174 VDLLIRTGGERRLSDFMLWEAAYAELLFTERMWPDFGPDDLAEAVAEFGRRERRFGGLKA 233
>gi|194897094|ref|XP_001978589.1| GG17596 [Drosophila erecta]
gi|190650238|gb|EDV47516.1| GG17596 [Drosophila erecta]
Length = 300
Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats.
Identities = 78/228 (34%), Positives = 123/228 (53%), Gaps = 5/228 (2%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ +MDGN R+A ++ + + GH +G E + + +VG++ +T FAFSI N++
Sbjct: 26 IPHHVAFVMDGNRRFARSQQIDKIEGHSRGFEKLADCLRWCLDVGVREVTTFAFSIENFK 85
Query: 70 RPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
R E+ L L + + L ++ I++RVIGN L D+ ++ A T
Sbjct: 86 RSNEEVEGLFNLAREKFARLLEETARLDEHGIRIRVIGNIELLPLDLQKLVASAMLSTER 145
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N L L +AF Y+SRDEI++A++ I + S + D+ L+ + L T P PDL+
Sbjct: 146 NDKLFLNVAFAYTSRDEITQAVETILRHG-SQDLAGEDISERLLEECLYTRHSPPPDLVF 204
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
RT GE RLSDF++WQ++ S F WP + F ++ Y RDR
Sbjct: 205 RTSGETRLSDFMMWQLSTSVLYFSNVLWPQITFWHFLASILAYQ-RDR 251
>gi|304390374|ref|ZP_07372327.1| undecaprenyl diphosphate synthase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|304326130|gb|EFL93375.1| undecaprenyl diphosphate synthase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
Length = 258
Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats.
Identities = 88/242 (36%), Positives = 124/242 (51%), Gaps = 8/242 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + P HIGII+DGN RWA A G P GH++G E++ E +K +T+
Sbjct: 21 LTHEIDPAGVPQHIGIILDGNRRWAKAEGAPTTRGHQRGALKITEVLQWCEEWPVKVVTL 80
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ SI+N R +E+ L +I ++ S + + +RV+G+ LD D+ +L+ A
Sbjct: 81 WMLSIDNLGRKAAELQPLQDVIGRTVQGLQASGRYH---LRVLGDTSLLDSDLADILRAA 137
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDT 176
D T L + IA Y R EI A++ + +V L I +L T
Sbjct: 138 -DGTGPEQALVVNIAVAYGGRQEIVNAVREYLTEAAQKGETLAEVTDQLRLEDIEAHLYT 196
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
PDPDL+IRT GE+RLS FLLWQ A SEF F YWP F + F AL Y R+RR
Sbjct: 197 KGQPDPDLVIRTSGEQRLSGFLLWQSANSEFYFCETYWPSFRKVDFLRALRDYGNRERRL 256
Query: 237 GG 238
G
Sbjct: 257 GK 258
>gi|18857969|ref|NP_572425.1| CG10778 [Drosophila melanogaster]
gi|17861830|gb|AAL39392.1| GM02310p [Drosophila melanogaster]
gi|22831913|gb|AAF46296.2| CG10778 [Drosophila melanogaster]
gi|220943196|gb|ACL84141.1| CG10778-PA [synthetic construct]
Length = 300
Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats.
Identities = 78/228 (34%), Positives = 123/228 (53%), Gaps = 5/228 (2%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ +MDGN R+A ++ + + GH +G E + + +VG++ +T FAFSI N++
Sbjct: 26 IPHHVAFVMDGNRRFARSQQIDKIEGHSRGFEKLADCLRWCLDVGVREVTTFAFSIENFK 85
Query: 70 RPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
R E+ L L + + L ++ I++RVIGN L D+ ++ A T
Sbjct: 86 RSNEEVEGLFNLAREKFARLLEETARLDEHGIRIRVIGNIELLPHDLQKLVASAMLSTER 145
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N L L +AF Y+SRDEI++A++ I + S + D+ L+ + L T P PDL+
Sbjct: 146 NDKLFLNVAFAYTSRDEITQAVETILRHG-SQDLAGEDISERLLEECLYTRHSPPPDLVF 204
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
RT GE RLSDF++WQ++ S F WP + F ++ Y RDR
Sbjct: 205 RTSGETRLSDFMMWQLSTSVLYFSNVLWPQITFWHFLASILAYQ-RDR 251
>gi|159036466|ref|YP_001535719.1| undecaprenyl diphosphate synthase [Salinispora arenicola CNS-205]
gi|157915301|gb|ABV96728.1| undecaprenyl diphosphate synthase [Salinispora arenicola CNS-205]
Length = 256
Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats.
Identities = 81/243 (33%), Positives = 122/243 (50%), Gaps = 8/243 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGL-PRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ A + P H+G++ DGN RWA G GHR G E E++ G+ ++T
Sbjct: 15 LTAKLAGKPVPRHVGVMCDGNRRWAREMGFVDPNDGHRVGAERIKELLRWCDAAGVGHVT 74
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++ S +N RP +++ L+++I+ + ++R++G L LK
Sbjct: 75 LWLLSTDNLTRPAAQLDPLLQIIEDLTLELAEEGNP--WRLRMVGALDVLPAPHAAGLKA 132
Query: 120 AEDQTRLN-TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYL 174
AE++TR G + IA Y R EI+ A++++ + D I ++L
Sbjct: 133 AEERTRDRVGGAQVNIAVGYGGRREIADAVRSLLHQHAKAGTSIEQLAETFDVEHITEHL 192
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
T +PDPDLIIRT GE+R+S FLLWQ +SEF F WP+F R F AL Y R R
Sbjct: 193 YTRGLPDPDLIIRTSGEQRMSGFLLWQSVHSEFYFCELNWPEFRRVDFLRALRSYATRQR 252
Query: 235 RFG 237
RFG
Sbjct: 253 RFG 255
>gi|163853461|ref|YP_001641504.1| undecaprenyl diphosphate synthase [Methylobacterium extorquens PA1]
gi|163665066|gb|ABY32433.1| undecaprenyl diphosphate synthase [Methylobacterium extorquens PA1]
Length = 236
Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats.
Identities = 97/228 (42%), Positives = 131/228 (57%), Gaps = 11/228 (4%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H IIMDGNGRWA+ARGLPR AGHR G++ + AA +GI LT++AFS +NWRR
Sbjct: 12 HAAIIMDGNGRWASARGLPRGAGHRAGVKTIQRVAEAAPALGIGTLTLYAFSSDNWRRSA 71
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+ L++L++++L+ L ++ ++ VIG R L I ++ AE T L+L
Sbjct: 72 EEVGGLMRLLRAYLRGETDRLARSGTRLTVIGRRDRLPPGIPEAIERAEAATASGDRLHL 131
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA +YSSRD I A + + ++K L D DL+IRTGGEK
Sbjct: 132 RIAVDYSSRDAILAAAARLG---------PEGLSREGLSKALGADG--DVDLLIRTGGEK 180
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RLSDFLLW+ AY+E F WPDF A+ + RDRRFGGL+
Sbjct: 181 RLSDFLLWEAAYAELHFTDRMWPDFGATDLAAAVADFTARDRRFGGLN 228
>gi|145222643|ref|YP_001133321.1| undecaprenyl diphosphate synthase [Mycobacterium gilvum PYR-GCK]
gi|315443107|ref|YP_004075986.1| undecaprenyl pyrophosphate synthetase [Mycobacterium sp. Spyr1]
gi|145215129|gb|ABP44533.1| Undecaprenyl pyrophosphate synthetase [Mycobacterium gilvum
PYR-GCK]
gi|315261410|gb|ADT98151.1| Undecaprenyl pyrophosphate synthetase [Mycobacterium sp. Spyr1]
Length = 263
Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats.
Identities = 85/241 (35%), Positives = 123/241 (51%), Gaps = 8/241 (3%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
S+ S P HI ++ DGN RWA G A G+R G E++ E GI+ T++
Sbjct: 25 SVKRSELPRHIAVLCDGNRRWARETGHDDVAYGYRVGAGKIAEMLRWCQEAGIEMATVYL 84
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
S N +R E+S L+++I +++ N VR +G+ + +D L++A
Sbjct: 85 LSTENLQREPEELSCLIEIITEVVEE--ICAPANQWSVRTVGDLELIGEDQARRLRDAVS 142
Query: 123 QTRLNTG-LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCS----HDVDSSLIAKYLDTS 177
T N G ++ +A Y R EI A++ + + V + I++ L TS
Sbjct: 143 STDGNGGAFHVNVAVGYGGRQEIVDAVRALLSKELANGATGDQLVEAVTAEAISENLYTS 202
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDPDL+IRT GE+RLS FLLWQ AYSE F YWP+F R F AL Y+ R RR+G
Sbjct: 203 GQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAYWPEFRRVDFLRALRDYSARHRRYG 262
Query: 238 G 238
Sbjct: 263 R 263
>gi|109948079|ref|YP_665307.1| undecaprenyl pyrophosphate synthase [Helicobacter acinonychis str.
Sheeba]
gi|109715300|emb|CAK00308.1| undecaprenyl pyrophosphate synthetase [Helicobacter acinonychis
str. Sheeba]
Length = 223
Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats.
Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 1/223 (0%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP SE+
Sbjct: 1 MDGNGRWARLKNKARAYGHKKGVKTLKDITIWCANYKLECLTLYAFSTENWKRPKSEVDF 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+K++K +LK + NNI+ R IG+ ++ + + E TR +A N
Sbjct: 61 LMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLESDTRYFKDFTQVLALN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y S++E+SRA K++ ++ +++ I+ LDT D+P+ DL++RTGGE RLS+F
Sbjct: 121 YGSKNELSRAFKSLLENPPDNIESLESLENE-ISNRLDTHDLPEVDLLLRTGGEMRLSNF 179
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 180 LLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELK 222
>gi|86740912|ref|YP_481312.1| undecaprenyl pyrophosphate synthetase [Frankia sp. CcI3]
gi|86567774|gb|ABD11583.1| Undecaprenyl pyrophosphate synthetase [Frankia sp. CcI3]
Length = 259
Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats.
Identities = 88/245 (35%), Positives = 133/245 (54%), Gaps = 8/245 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLP-RCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ +M+ P H+G++MDGN RWA G+ GH+ G E ++++ VGIK++T
Sbjct: 16 LRRQVMAGPLPAHVGLVMDGNRRWAREMGMANPSLGHKYGAEHAEDVLSWCELVGIKHVT 75
Query: 60 IFAFSINNWR-RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+F S N + R +E++ L+++I+ + +V + G +L D VLK
Sbjct: 76 VFVCSTENLQQRGDAEVAFLMQVIEQVVADRLGR-PDARWQVHLAGMLDTLPDSTARVLK 134
Query: 119 EAEDQTRL-NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKY 173
EA + TR TG ++ +A Y R E+ A++ + + DV S+L IA++
Sbjct: 135 EAVETTRSVTTGAHVTLAVGYGGRQEVIEALRELLHERAEAGDSLTDVASTLTVDDIAQH 194
Query: 174 LDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
L T+ PDPDL+IRT GE+RLS+FLLWQ AYSE F YWP F F AL + R+
Sbjct: 195 LYTAGQPDPDLVIRTSGEQRLSNFLLWQSAYSELYFCEAYWPAFREIDFLRALRSFAARE 254
Query: 234 RRFGG 238
RR G
Sbjct: 255 RRHGA 259
>gi|290462293|gb|ADD24194.1| Dehydrodolichyl diphosphate synthase [Lepeophtheirus salmonis]
Length = 265
Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats.
Identities = 73/234 (31%), Positives = 128/234 (54%), Gaps = 6/234 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+++ + + S P H+ IMDGN R+A + GH G + +E + ++GI+ +++
Sbjct: 20 LLSILRTGSLPRHVAFIMDGNRRFARKSKVELIEGHSSGFDKLSETLFWCRDLGIEEVSV 79
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKK---GFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++RP E+++L+ L +S +K + L + ++V+VIGN L +D+ V+
Sbjct: 80 YAFSIENFKRPQHEVNDLLDLARSKFQKLFSEIHRLAEKGVRVQVIGNLALLPEDLQEVI 139
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
++ + T+ ++ L +AF Y+SRDE++ AI++ ES S ++ + +
Sbjct: 140 RKCVESTKDHSKCTLNVAFAYTSRDELTTAIRSAV---ESEKDSSAHIEPKTLENHFYGK 196
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
DLIIRT GE RLSDF+LWQ +Y+ F WP+F + Y
Sbjct: 197 GRSQVDLIIRTSGEVRLSDFVLWQGSYAVTYFTKVLWPEFRLLNLMAGIFHYQH 250
>gi|134074493|emb|CAK38787.1| unnamed protein product [Aspergillus niger]
Length = 296
Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats.
Identities = 77/236 (32%), Positives = 123/236 (52%), Gaps = 6/236 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+V ++ P HI +MDGN R+A G+ GH G E I+ + G+K +TI
Sbjct: 31 LVGAIRQGPVPQHIAFVMDGNRRFARTHGIETVEGHNMGFEALARILEVCYKSGVKVVTI 90
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+++ + L + L + KVR++G L D+L +
Sbjct: 91 YAFSIENFKRSKFEVDALMEMARVKLSQMAQHGEILDRYGAKVRILGRLDLLRPDVLAAV 150
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
A + T N L I F Y+SRDEI+ A+++ D+ + + ++++L T
Sbjct: 151 NRAVEMTSNNGDCVLNICFPYTSRDEITTAVRDTVADLVF--MSPETITRQTLSEHLFTH 208
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFFHALNQYNLR 232
D P DL++RT G +RLSDF+LWQ +E VF+ WPDF F + ++ R
Sbjct: 209 DNPPLDLLVRTSGVERLSDFMLWQCHEDTEIVFLDVLWPDFDLWQFLPVMLRWQRR 264
>gi|11498818|ref|NP_070047.1| hypothetical protein AF1219 [Archaeoglobus fulgidus DSM 4304]
gi|6136142|sp|O29049|UPPS_ARCFU RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|2649365|gb|AAB90027.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
Length = 251
Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats.
Identities = 78/236 (33%), Positives = 130/236 (55%), Gaps = 3/236 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ S+ + P HI IIMDGN R+A +GL GH G + E++ ++G+K LT+
Sbjct: 11 LLRSVRKGAIPHHIAIIMDGNRRFARKKGLEPHEGHFFGSKKAEEVLEWCWDLGVKMLTL 70
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLK--KNNIKVRVIGNRLSLDDDILCVLK 118
+AFS N+RR E + +L++S L++ + + ++V+V+G R L +++ +K
Sbjct: 71 YAFSTENFRRSEKEKKNIFQLLESELRRLLKDRRTYERELRVKVVGKRELLPENLRETIK 130
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
E E++T+ + L +A Y R EI A++ I + + G V ++D ++ ++L
Sbjct: 131 EVEERTKKHRRHYLNVAVAYGGRQEIIDAVRAILRKVRKGEVRPEEIDEKMLEEHLYGEG 190
Query: 179 -VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
DLIIRTGGE+RLS+FL WQ A S F YWP+F + A+ + R
Sbjct: 191 RYSKVDLIIRTGGEQRLSNFLPWQAANSVAYFCDVYWPEFRKIDLLRAIRAWQYRK 246
>gi|293189383|ref|ZP_06608106.1| di-trans,poly-cis-decaprenylcistransferase [Actinomyces
odontolyticus F0309]
gi|292821846|gb|EFF80782.1| di-trans,poly-cis-decaprenylcistransferase [Actinomyces
odontolyticus F0309]
Length = 253
Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats.
Identities = 78/242 (32%), Positives = 129/242 (53%), Gaps = 7/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ A + ++ P HIG+I+DGN RWA + G GHR G +E + + + G+ +T+
Sbjct: 15 LKAELSDAAVPAHIGVILDGNRRWAKSLGATASQGHRAGAGKISEFLQWSDDAGVSIVTL 74
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N R E+ EL+++I + + K+ V+G+ L + + L+ +
Sbjct: 75 WLLSTDNLSRDAGELGELLRIICEAVSLLAD---QGRWKLAVVGDLSLLPEKVAEDLRAS 131
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLDT 176
+T G+ + IA Y R EI+ A++++ ++ + ++ + I ++ T
Sbjct: 132 VARTAGVQGMTVNIAVGYGGRHEITEAVRSMMREASAQGRTLDELADSFTDADITAHVYT 191
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
D PDPDL+IRT GE+RLS F+LWQ +SE+ F YWPDF R F AL Y R+RR
Sbjct: 192 KDQPDPDLVIRTSGEQRLSGFMLWQSVHSEYYFCEVYWPDFRRVDFLRALRSYAQRERRM 251
Query: 237 GG 238
G
Sbjct: 252 GK 253
>gi|240170280|ref|ZP_04748939.1| short (C15) chain Z-isoprenyl diphosphate synthase, UppS
[Mycobacterium kansasii ATCC 12478]
Length = 262
Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats.
Identities = 76/236 (32%), Positives = 120/236 (50%), Gaps = 7/236 (2%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S P HI ++ DGN RWA + G G+R G E++ + GI+ T++ S
Sbjct: 29 SELPRHIAVLCDGNRRWARSAGYEDVSYGYRMGAAKIAEMLRWCQDAGIEMTTVYLLSTE 88
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
N +R E++ L+++I +++ N VR +G+ + ++ +++A + T
Sbjct: 89 NLQRDPDELAGLIEIITDVVEE--ICAPANRWSVRTVGDLGLIGEEPARRVRDAVESTPE 146
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSDVPDP 182
++ +A Y R EI A++ + + + + V I++ L TS PDP
Sbjct: 147 TASFHVNVAVGYGGRREIVDAVRALLSKELANGASAEELVDAVTEDGISENLYTSGQPDP 206
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DL+IRT GE+RLS FLLWQ AYSE F +WP F R F AL Y+ R RR+G
Sbjct: 207 DLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRRVDFLRALRDYSQRHRRYGK 262
>gi|257069432|ref|YP_003155687.1| Undecaprenyl pyrophosphate synthetase [Brachybacterium faecium DSM
4810]
gi|256560250|gb|ACU86097.1| Undecaprenyl pyrophosphate synthetase [Brachybacterium faecium DSM
4810]
Length = 252
Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats.
Identities = 79/241 (32%), Positives = 127/241 (52%), Gaps = 8/241 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + P H+G+I+DGN RWA G GHR G E ++ ++ I +T+
Sbjct: 15 LTRELEAFDLPQHLGVIVDGNRRWAKEAGETTEHGHRVGAAKILEFLSWCDDLDIPLVTV 74
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N RRP E++ L ++I + + + + VR+ GN +L ++ +
Sbjct: 75 WMLSTDNLRRPPEELTALYEIIGATIGRIIDA----GYCVRLTGNAEALPQEMRADISRE 130
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLDT 176
++QT + L + +A Y R+EI A++ + +D+ + + + IA++L T
Sbjct: 131 QEQTAPESRLTVNVAIGYGGREEIVDAVQELVRDLAAQGLDGDGIAAGISIGSIAEHLYT 190
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
PDPDLIIRT GE+RLS FLLWQ +SE+ F YWP F R AL + R+RRF
Sbjct: 191 RGQPDPDLIIRTSGEQRLSGFLLWQSVHSEYWFCETYWPGFRRVDLLRALRDFCRRERRF 250
Query: 237 G 237
G
Sbjct: 251 G 251
>gi|18376082|emb|CAD21109.1| probable cis-prenyltransferase [Neurospora crassa]
Length = 283
Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats.
Identities = 73/240 (30%), Positives = 129/240 (53%), Gaps = 5/240 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ +MDGN R+A + + GH G E ++ + G++ +T+
Sbjct: 30 LIGALKQGPVPRHVAFVMDGNRRYARSHKIETIEGHHLGFEALARVLEICYKCGVEVVTV 89
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N+ RP E+ L++L K L++ L++ VRV+G R L DD+L V+
Sbjct: 90 YAFSIENFNRPKYEVDGLMQLAKVKLEQLIQHGELLERYGASVRVLGERDLLSDDVLEVI 149
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKN-IFQDIESGSVCSHDVDSSLIAKYLDT 176
A T+ N L I F Y+SR+E++ AI++ + + ++ + I K++ T
Sbjct: 150 DRAVSTTKNNKKCILNICFPYTSREEMTTAIRSTDGSNHVTIYPNVENITTETIDKHMYT 209
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
+D P D+ +RT G +RLSDF+LWQ ++ F+ +WP+F F L ++ R ++
Sbjct: 210 ADCPPLDIFVRTSGVERLSDFMLWQCHQDTQMFFLKCFWPEFDLRHFLPVLLEWQWRQKK 269
>gi|15897113|ref|NP_341718.1| undecaprenyl diphosphate synthase [Sulfolobus solfataricus P2]
gi|284174354|ref|ZP_06388323.1| undecaprenyl diphosphate synthase [Sulfolobus solfataricus 98/2]
gi|41018477|sp|Q980W4|UPPS_SULSO RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|13813292|gb|AAK40508.1| Undecaprenyl diphosphate synthase [Sulfolobus solfataricus P2]
gi|22212911|tpg|DAA00056.1| TPA_exp: undecaprenyl diphosphate synthase [Sulfolobus
solfataricus]
gi|261601775|gb|ACX91378.1| undecaprenyl diphosphate synthase [Sulfolobus solfataricus 98/2]
Length = 262
Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats.
Identities = 79/241 (32%), Positives = 120/241 (49%), Gaps = 3/241 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + PDH+GII DGN RWA L + G + E++ E+GIKN+T+
Sbjct: 22 LWNQIRNGPLPDHVGIIPDGNRRWARDNNLSLNDAYFYGYKKLKEVLIWLLELGIKNITV 81
Query: 61 FAFSINNW-RRPVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVL 117
F S N +R +E+S + IK ++ + K +KV IG L D++ L
Sbjct: 82 FVLSTENCDKRKQNELSIITTYIKRGIQDLLEDPIVDKYEVKVSAIGKLDKLPKDLIDYL 141
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
++T L +A Y R EI A+ + D +G + +++ KY S
Sbjct: 142 NRVVEKTSNYDKRKLTLAICYGGRQEILDAVVRLLDDYRNGKIVKSEINEETFRKYFYDS 201
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
++ D DL+IRT GE R+S+FLLW VAYSE F YWP+F + + A+ + R R FG
Sbjct: 202 ELQDIDLVIRTSGEVRISNFLLWHVAYSELFFCEAYWPEFRKIDLWRAIRSFQKRKRNFG 261
Query: 238 G 238
Sbjct: 262 A 262
>gi|298676135|ref|YP_003727884.1| undecaprenyl diphosphate synthase [Methanohalobium evestigatum
Z-7303]
gi|298289123|gb|ADI75088.1| undecaprenyl diphosphate synthase [Methanohalobium evestigatum
Z-7303]
Length = 284
Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats.
Identities = 78/251 (31%), Positives = 130/251 (51%), Gaps = 10/251 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P H+ IIMDGN R+A G GH+ G + +++ A E+GI+ +T+
Sbjct: 17 LTREVEEFPVPKHVAIIMDGNRRYAKNMGKAGYYGHKLGSDTTEKVIEWACEIGIEEMTV 76
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNN--IKVRVIGNRLSLDDDILCVLK 118
+AFS N+ RP E +L +LI + L + + +N +K+R +G+R L + ++
Sbjct: 77 YAFSTENFSRPPEETEKLFELIDTRLNEMVEDERTHNRQMKIRAVGDRKRLPQYLQDSIE 136
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD-TS 177
AE T L +A Y R +I +A++ I + ++ G + V+ S I+ +L
Sbjct: 137 RAEKATCHYENFKLNVALAYGGRQDIIQAVQEIARKVKRGDLTVEKVNESTISNHLYPDC 196
Query: 178 DVP--DPDLIIRTGGEKRLSDFLLWQVAYSEF--VFIPEYWPDFSRELFFHALNQYNLR- 232
+ P D D+I+RTGG +R+S+FL WQ +E F YWP F + F A+ Y R
Sbjct: 197 EQPVSDVDMIVRTGGNERVSNFLPWQANGNECTAYFCAPYWPMFRKIDFLRAIRVYQARL 256
Query: 233 --DRRFGGLSK 241
+ +G LS+
Sbjct: 257 TKKKGYGRLSR 267
>gi|298345923|ref|YP_003718610.1| undecaprenyl pyrophosphate synthetase [Mobiluncus curtisii ATCC
43063]
gi|315657581|ref|ZP_07910463.1| undecaprenyl diphosphate synthase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|298235984|gb|ADI67116.1| undecaprenyl pyrophosphate synthetase [Mobiluncus curtisii ATCC
43063]
gi|315492053|gb|EFU81662.1| undecaprenyl diphosphate synthase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 258
Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats.
Identities = 87/242 (35%), Positives = 124/242 (51%), Gaps = 8/242 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + P HIGII+DGN RWA A G P GH++G E++ E +K +T+
Sbjct: 21 LTHEIDPAGVPQHIGIILDGNRRWAKAEGAPATRGHQRGALKITEVLQWCEEWPVKVVTL 80
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ SI+N R +E+ L +I ++ S + + +RV+G+ LD D+ +L+ A
Sbjct: 81 WMLSIDNLGRKAAELQPLQDVIGRTVQGLQASGRYH---LRVLGDTSLLDSDLADILRAA 137
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDT 176
+ T L + IA Y R EI A++ + +V L I +L T
Sbjct: 138 DG-TGPEQALVVNIAVAYGGRQEIVNAVREYLTEAAQKGETLAEVTDQLRLEDIEAHLYT 196
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
PDPDL+IRT GE+RLS FLLWQ A SEF F YWP F + F AL Y R+RR
Sbjct: 197 KGQPDPDLVIRTSGEQRLSGFLLWQSANSEFYFCETYWPSFRKVDFLRALRDYGNRERRL 256
Query: 237 GG 238
G
Sbjct: 257 GK 258
>gi|219116104|ref|XP_002178847.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409614|gb|EEC49545.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 247
Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats.
Identities = 80/241 (33%), Positives = 121/241 (50%), Gaps = 7/241 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ S P HI ++MDGN R+ R +GH G E I LT++AFS
Sbjct: 7 IPRSHLPQHIAVVMDGNRRYGTLRYGKATSGHWDGSRKVLECAKWCLAEHIPVLTVYAFS 66
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGN-RLSLDDDILCVLKEAEDQ 123
NWRR E++ L+ L ++ ++ + NI+VRV+ + + L E
Sbjct: 67 TENWRRDPQEVATLMSLFVTYCEELRVEAIQRNIRVRVVSTEHDPIPPPVRAGLLRLEHD 126
Query: 124 TRLN-----TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
TR GL + I +Y SR EI +A + + + G++ D+ S + + L TS
Sbjct: 127 TRHCAAEGTDGLQMNILLSYGSRGEIVQACQALASECLHGNLALQDISESHLQQRLLTSH 186
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQY-NLRDRRFG 237
VPDPD++IRT GE RLS+FLLWQ+AY+E F+ + WP+ + + Y R RR+G
Sbjct: 187 VPDPDVVIRTSGEFRLSNFLLWQIAYAELFFLEKNWPELQKADLVEIIRSYAAKRQRRYG 246
Query: 238 G 238
Sbjct: 247 K 247
>gi|159483069|ref|XP_001699585.1| hypothetical protein CHLREDRAFT_121674 [Chlamydomonas reinhardtii]
gi|158272690|gb|EDO98487.1| predicted protein [Chlamydomonas reinhardtii]
Length = 227
Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats.
Identities = 84/229 (36%), Positives = 126/229 (55%), Gaps = 2/229 (0%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ +MDGN RW + G GH +G+ +V E G+K LT++AFS NW
Sbjct: 1 VPAHVAAVMDGNHRWGTSHGGDWRRGHEEGVNALRRVVQFCREDGVKALTVYAFSCENWG 60
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R SE+ L+ L++ L L+K+ +++ G+R +L + + ++ AE T TG
Sbjct: 61 RSASEVGFLMGLLERTLDAVLPDLQKHGVRLTFAGDRAALPESLQRAMQRAEAATGSCTG 120
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
L L +A +Y +R +I+RA + + + + GS+ V + T V DPDL+IRT
Sbjct: 121 LVLCVALSYGARQDITRAAQELCRRVAEGSLAPEQVGGAAWGGV--TGQVGDPDLLIRTS 178
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GE+RLS+FLLW+ AY+E F WPDF R + A+ Y R RRFG
Sbjct: 179 GEQRLSNFLLWECAYTELYFTDACWPDFDRPHWDAAMQHYATRTRRFGR 227
>gi|183984351|ref|YP_001852642.1| short (C15) chain Z-isoprenyl diphosphate synthase, UppS
[Mycobacterium marinum M]
gi|183177677|gb|ACC42787.1| short (C15) chain Z-isoprenyl diphosphate synthase, UppS
[Mycobacterium marinum M]
Length = 262
Score = 235 bits (599), Expect = 5e-60, Method: Composition-based stats.
Identities = 82/237 (34%), Positives = 121/237 (51%), Gaps = 7/237 (2%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
SS P HI ++ DGN RWA G G+R G E++ E GI+ T++ S
Sbjct: 28 SSELPRHIAVLCDGNRRWARDAGYDDVSYGYRMGAAKIAEMLRWCQEAGIEMTTVYLLST 87
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
N +R E++ L+++I +++ N VR +G+ L D+ L+EA + T
Sbjct: 88 ENLQRDADELAALIEIITDVVEE--ICAPANRWSVRTVGDLELLGDEPARRLREAVESTP 145
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSDVPD 181
++ +A Y R EI A++ + + + + V I++ L TS PD
Sbjct: 146 ATAQFHVNVAVGYGGRREIVDAVRALLSKELANGATAEELIDAVSVEGISENLYTSGQPD 205
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PDL+IRT GE+RLS FLLWQ AYSE F +WP F R F AL Y++R RR+G
Sbjct: 206 PDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRRVDFLRALRDYSMRHRRYGK 262
>gi|115473277|ref|NP_001060237.1| Os07g0607700 [Oryza sativa Japonica Group]
gi|50508667|dbj|BAD31153.1| putative cis-prenyltransferase [Oryza sativa Japonica Group]
gi|50509860|dbj|BAD32032.1| putative cis-prenyltransferase [Oryza sativa Japonica Group]
gi|113611773|dbj|BAF22151.1| Os07g0607700 [Oryza sativa Japonica Group]
gi|215697311|dbj|BAG91305.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 299
Score = 235 bits (599), Expect = 6e-60, Method: Composition-based stats.
Identities = 70/245 (28%), Positives = 119/245 (48%), Gaps = 14/245 (5%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+VA + P HI IMDGN R+A R + +GHR G + E+G+K +T+
Sbjct: 39 IVAVLSYGPMPKHIAFIMDGNRRYAKFRSIQEGSGHRMGFSALIASLLYCYEMGVKYITV 98
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI+N++R ++E+ L++L++ + + + + K N K+ G L + +
Sbjct: 99 YAFSIDNFKRDLTEVKSLMELMEEKINELLENRNVINKVNCKINFWGKLDMLSEPVRVAA 158
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSH-----------DVD 166
++ T N GL + Y+S EI A+ + + D+
Sbjct: 159 EKLMVSTAENKGLVFSVCMPYNSTSEIVIAVNKVCAERRDILQREDVDSVANNGVHSDIS 218
Query: 167 SSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHAL 226
+ + ++ ++ PDPD++IRT GE RLS+FLLWQ +S WP+FS + A+
Sbjct: 219 VADLDHHMYSAGCPDPDIVIRTSGETRLSNFLLWQTTFSHLQNPDPLWPEFSFKHLVWAI 278
Query: 227 NQYNL 231
QY
Sbjct: 279 LQYQR 283
>gi|118616083|ref|YP_904415.1| short (C15) chain Z-isoprenyl diphosphate synthase, UppS
[Mycobacterium ulcerans Agy99]
gi|118568193|gb|ABL02944.1| short (C15) chain Z-isoprenyl diphosphate synthase, UppS
[Mycobacterium ulcerans Agy99]
Length = 271
Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats.
Identities = 82/237 (34%), Positives = 121/237 (51%), Gaps = 7/237 (2%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
SS P HI ++ DGN RWA G G+R G E++ E GI+ T++ S
Sbjct: 37 SSELPRHIAVLCDGNRRWARDAGYDDVSYGYRMGAAKIAEMLRWCQEAGIEMTTVYLLST 96
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
N +R E++ L+++I +++ N VR +G+ L D+ L+EA + T
Sbjct: 97 ENLQRDADELAALIEIITDVVEE--ICAPANRWSVRTVGDLELLGDEPARRLREAVESTP 154
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSDVPD 181
++ +A Y R EI A++ + + + + V I++ L TS PD
Sbjct: 155 ATAQFHVNVAVGYGGRREIVDAVRALLSKELANGATAEELIDAVSVEGISENLYTSGQPD 214
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PDL+IRT GE+RLS FLLWQ AYSE F +WP F R F AL Y++R RR+G
Sbjct: 215 PDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRRVDFLRALRDYSMRHRRYGK 271
>gi|315654510|ref|ZP_07907416.1| undecaprenyl diphosphate synthase [Mobiluncus curtisii ATCC 51333]
gi|315490974|gb|EFU80593.1| undecaprenyl diphosphate synthase [Mobiluncus curtisii ATCC 51333]
Length = 258
Score = 234 bits (598), Expect = 7e-60, Method: Composition-based stats.
Identities = 87/242 (35%), Positives = 124/242 (51%), Gaps = 8/242 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + P HIGII+DGN RWA A G P GH++G E++ E +K +T+
Sbjct: 21 LIHEIDPVGVPQHIGIILDGNRRWAKAEGAPATRGHQRGALKITEVLQWCEEWPVKVVTL 80
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ SI+N R +E+ L +I ++ S + + +RV+G+ LD D+ +L+ A
Sbjct: 81 WMLSIDNLGRKAAELQPLQDVIGRTVQGLQASGRYH---LRVLGDTSLLDSDLAGILRAA 137
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDT 176
+ T L + IA Y R EI A++ + +V L I +L T
Sbjct: 138 DG-TGPEQALVVNIAVAYGGRQEIVNAVREYLNEAAQKGETLAEVTDQLRLEDIEAHLYT 196
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
PDPDL+IRT GE+RLS FLLWQ A SEF F YWP F + F AL Y R+RR
Sbjct: 197 KGQPDPDLVIRTSGEQRLSGFLLWQSANSEFYFCETYWPSFRKVDFLRALRDYGNRERRL 256
Query: 237 GG 238
G
Sbjct: 257 GK 258
>gi|217034076|ref|ZP_03439497.1| hypothetical protein HP9810_893g23 [Helicobacter pylori 98-10]
gi|216943471|gb|EEC22925.1| hypothetical protein HP9810_893g23 [Helicobacter pylori 98-10]
Length = 223
Score = 234 bits (597), Expect = 8e-60, Method: Composition-based stats.
Identities = 81/223 (36%), Positives = 132/223 (59%), Gaps = 1/223 (0%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA + R GH+KG++ +I A ++ LT++AFS NW+RP SE+
Sbjct: 1 MDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPKSEVDF 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+K++K +LK + N+I+ + IG+ ++ + + E+ TR +A N
Sbjct: 61 LMKMLKKYLKDEHSTYLDNHIRFKAIGDLEGFSKELRETILKLENDTRHFKDFTQVLALN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y S++E+SRA K++ + S +++ I+ LDT ++P+ DL++RTGGE RLS+F
Sbjct: 121 YGSKNELSRAFKSLLESPPSNISLLESLENE-ISNRLDTRNLPEVDLLLRTGGEMRLSNF 179
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 180 LLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELK 222
>gi|219120083|ref|XP_002180788.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407504|gb|EEC47440.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 266
Score = 234 bits (597), Expect = 8e-60, Method: Composition-based stats.
Identities = 78/237 (32%), Positives = 120/237 (50%), Gaps = 7/237 (2%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P H+ + DGN RWAAA LP AGH G + ++ + ++ T++ FS NW
Sbjct: 20 NLPRHVAFVCDGNSRWAAAHNLPSSAGHIAGADRLIHVLDGLRDRRVQYCTMYGFSTENW 79
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRL--SLDDDILCVLKEAEDQTRL 126
+RP E+ +++ ++++ ++ + + N+ VR++G+ L + +L++ E T
Sbjct: 80 KRPAHEVRDILNVMETTARRFYNRALEENVCVRLLGDLDDKRLPKGLTTLLRKLEQDTAR 139
Query: 127 NTG---LNLFIAFNYSSRDEISRAIKN--IFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
G L +A NY R +I A + D + D+D +L T +PD
Sbjct: 140 KDGEDKFTLCVALNYGGRQDILNASRRLVEAVDDANTEFTIADIDEDAFCSFLSTVGIPD 199
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PDLI+RT GE RLS+FLLW AY+E F WPDF AL Y R RRFG
Sbjct: 200 PDLIVRTSGESRLSNFLLWNAAYAELYFTTVLWPDFDETALDDALEWYAQRKRRFGA 256
>gi|167043021|gb|ABZ07733.1| putative undecaprenyl diphosphate synthase [uncultured marine
microorganism HF4000_ANIW141A21]
Length = 259
Score = 234 bits (597), Expect = 9e-60, Method: Composition-based stats.
Identities = 78/236 (33%), Positives = 125/236 (52%), Gaps = 2/236 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + + P H+G+I+DGN R+A G GH G + + + E GI+N+T+
Sbjct: 21 LASQIGKEAKPKHVGVILDGNRRYANHFGFDFRRGHEIGSKRGKDFLIWCLEYGIENITL 80
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVLK 118
FAFS N+ RP E+ +++K+IK ++ + KN +++R +G L DD+ +
Sbjct: 81 FAFSSENFSRPKEEVDDILKIIKERFEELADDPIVHKNKVRIRALGRLEMLPDDLRKAID 140
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
A T+ NL +A Y R E+ A I Q +++G + S DV I K L D
Sbjct: 141 RASRATKNYDKFNLNVAVAYGGRTELVDATVEIAQQVKNGQLLSKDVTEETITKSLYLPD 200
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
+P D+I+RT GEKRLS+F+LWQ S +FI YWP+ + ++ + R R
Sbjct: 201 LPPLDIILRTSGEKRLSNFMLWQALGSFVIFIDIYWPEIRKIDLARSIRTFQSRSR 256
>gi|328869193|gb|EGG17571.1| Dehydrodolichyl diphosphate synthase [Dictyostelium fasciculatum]
Length = 383
Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats.
Identities = 70/230 (30%), Positives = 120/230 (52%), Gaps = 5/230 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P HIG+IMDGN R+A + GH+ G ++ +G++ ++++AFS
Sbjct: 106 LRYGPIPKHIGVIMDGNRRFARKLHIETSEGHKLGFTKMLDLCQWGLALGVEIISVYAFS 165
Query: 65 INNWRRPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++RP E+ L+ L ++ + L+K I++RV+G+ + + +L A
Sbjct: 166 IENFKRPKQEVEYLMDLANKKFEEMISKTHKLQKMGIRIRVVGDLSYIPEKTKSILARAV 225
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T+ NT L + +Y+S +E+ ++ I ++ + D++ L K L D D
Sbjct: 226 LATQHNTRALLNVCMSYTSHNEMLHSMNTISNAVKDNVLLPEDINQELFEKCLYIPD--D 283
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
D+++RT GE RLSDF+LWQ +S F+ WPDFS FF+ + Y
Sbjct: 284 LDILVRTSGEYRLSDFMLWQTCFSGTNFLNVLWPDFSSFHFFYIIFLYQS 333
>gi|297744131|emb|CBI37101.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 68/230 (29%), Positives = 107/230 (46%), Gaps = 3/230 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P+HI IMDGN R+A + L AGH+ G ++ + E+G+K +TI+AFS
Sbjct: 28 LSVGPIPNHIAFIMDGNRRFAKKQNLIEGAGHKVGYLALMSMLRYSYELGVKYVTIYAFS 87
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R E+ ++ L++ +++ L ++V IGN L + + A
Sbjct: 88 IENFKRRPEEVQSVMDLMQEKIEQLINEESILNHFGVRVHFIGNLKLLSAPVRLAAERAM 147
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T N+ L I Y+S +EI A++ I K+L + PD
Sbjct: 148 LVTACNSKAVLSICVAYTSTNEIMHAVEESCVKKWDEIRELKASGVDYIEKHLYMAVAPD 207
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
PD++IRT GE RLS+FLLWQ Y WP+ A+ +
Sbjct: 208 PDILIRTSGETRLSNFLLWQSQYCYLYSPSVLWPEIGFWHLLWAVLNFQR 257
>gi|254819722|ref|ZP_05224723.1| short-chain Z-isoprenyl diphosphate synthetase [Mycobacterium
intracellulare ATCC 13950]
Length = 264
Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 79/237 (33%), Positives = 119/237 (50%), Gaps = 7/237 (2%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
S P HI ++ DGN RWA G G+R G E++ E GI+ T++ S
Sbjct: 30 KSELPRHIAVLCDGNRRWARDAGYDDVSYGYRMGAAKIAEMLRWCQEAGIEMTTVYLLST 89
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
N +R E++ L+++I +++ N VR +G+ L + L+ A + T
Sbjct: 90 ENLQRDPDELAGLIEIITDVVEE--ICAPANRWSVRTVGDLELLGEQPARRLRGAVESTP 147
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSDVPD 181
+ ++ +A Y R EI A++++ + + + V I++ L TS PD
Sbjct: 148 VVAPFHVNVAVGYGGRREIVDAVRSLLSKELANGATAEELIDTVTVDAISENLYTSGQPD 207
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PDL+IRT GE+RLS FLLWQ AYSE F +WP F R F AL Y+ R RR+G
Sbjct: 208 PDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRRVDFLRALRDYSQRHRRYGK 264
>gi|586925|sp|P20182|UPPS_STRFR RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
Length = 259
Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 85/246 (34%), Positives = 122/246 (49%), Gaps = 9/246 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLP-RCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ + P HIG+IMDGN RWA G+ GHR G E +++ GIK++T
Sbjct: 15 LRRQTAAGPLPKHIGLIMDGNRRWARQMGMANPSIGHRYGAEHVESVLSWCETAGIKHVT 74
Query: 60 IFAFSINNWRRPVS-EISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSL-DDDILCVL 117
+F S N +R E+S L+++I+ + +VR+ G D L
Sbjct: 75 VFVCSTENLQRRGDTEVSFLMQVIEQVVAVHLAR-PDARWQVRIAGTLDXPCADSTAHAL 133
Query: 118 KEAEDQTRLNT-GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAK 172
KEA + TR T G + +A Y R E+ A++ + + + D+ I +
Sbjct: 134 KEAVEATRRCTTGSQVTLAIGYGGRQEVIDAVRELLHEQAAAGTTLEDLAASLTMDDITR 193
Query: 173 YLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLR 232
+L T+ PDPDL+IRT GE+R+S+FLLWQ AYSE F YWP F F AL Y R
Sbjct: 194 HLYTAGQPDPDLVIRTSGEQRMSNFLLWQSAYSELYFCEAYWPAFREIDFLRALRSYAAR 253
Query: 233 DRRFGG 238
RR+G
Sbjct: 254 QRRYGA 259
>gi|296169955|ref|ZP_06851562.1| undecaprenyl diphosphate synthase [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295895359|gb|EFG75065.1| undecaprenyl diphosphate synthase [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 262
Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 78/237 (32%), Positives = 121/237 (51%), Gaps = 7/237 (2%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGL-PRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
S P HI ++ DGN RWA G G+R G E++ E GI+ T++ S
Sbjct: 28 KSHLPRHIAVLCDGNRRWARDAGYTDVSYGYRMGAAKIAEMLRWCQEAGIEMTTVYLLST 87
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
N +R E++ L+++I +++ N VR +G+ L ++ L+ A + T
Sbjct: 88 ENLQRDPDELAGLIEIITDVVEE--ICAPANRWSVRTVGDLELLGEEPARRLRGAVESTP 145
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDVPD 181
+ ++ +A Y R EI A++ + + + ++ ++ I++ L TS PD
Sbjct: 146 VVAPFHVNVAVGYGGRREIVDAVRALLSKELANGASAEELIEAVTVDGISENLYTSGQPD 205
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PDL+IRT GE+RLS FLLWQ AYSE F +WP F R F AL Y+ R RR+G
Sbjct: 206 PDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRRVDFLRALRDYSQRHRRYGK 262
>gi|206563907|ref|YP_002234670.1| putative undecaprenyl pyrophosphate synthetase [Burkholderia
cenocepacia J2315]
gi|198039947|emb|CAR55925.1| putative undecaprenyl pyrophosphate synthetase [Burkholderia
cenocepacia J2315]
Length = 256
Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 79/233 (33%), Positives = 124/233 (53%), Gaps = 6/233 (2%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ +I+DGN RWA GLP G+R G + +++ E GI +T++ S N
Sbjct: 27 PLPTHLAVILDGNRRWADRLGLPAADGYRAGGRNVHALLSWCEETGIPFVTLWPLSTENL 86
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+R E+ +L+ +I + ++ VIG+ L ++ A+ +T
Sbjct: 87 QRDAGELRDLLAVIGDVFDEL---AACGRWRLHVIGDLTQLPPATAERIRAAQQRTAHAR 143
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSH---DVDSSLIAKYLDTSDVPDPDLI 185
GL++ IA YS R ++ A++++ + + + LIA L T+ P+PDL+
Sbjct: 144 GLDVNIAVAYSGRLDLLHAVRSLIAEHVAAGTVEQLLAQLSPELIASRLYTAGQPEPDLV 203
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
IRT GE+RLS+F+LWQ A+SEF F P WPDF R+ F A++ Y R RRFG
Sbjct: 204 IRTSGEQRLSNFMLWQTAFSEFYFTPTCWPDFGRDDFEQAIDAYGKRARRFGK 256
>gi|288932337|ref|YP_003436397.1| undecaprenyl diphosphate synthase [Ferroglobus placidus DSM 10642]
gi|288894585|gb|ADC66122.1| undecaprenyl diphosphate synthase [Ferroglobus placidus DSM 10642]
Length = 251
Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 82/237 (34%), Positives = 125/237 (52%), Gaps = 4/237 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P+HI IIMDGN R+A RGLP GH G + +++ E+GIK LT+
Sbjct: 10 LEREVKKKRLPNHIAIIMDGNRRYARKRGLPPQMGHFFGSKKAEKVLEWCYELGIKTLTV 69
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
FAFS N++R E L +LI+ L + + +N +KVR+IG + L +L
Sbjct: 70 FAFSTENFKRNEEEKRNLFQLIRRELFRLAEDKRIHRNRVKVRIIGKKELLPKYVLEAAS 129
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
E +T+ L IA Y +R EI+ A++ + + + +G V + ++D +I + L +
Sbjct: 130 FVEKRTKEYDNFRLNIAIAYGARQEIAEAVRKVLEKVLNGEVKAEEIDLKMIEENLY--E 187
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
D+IIRTG E RLS+FL+WQ A F YWP+F R A+ + R R
Sbjct: 188 NMPVDIIIRTGKEMRLSNFLIWQSASKYAYFCDVYWPEFRRIDLLRAIRSWQKRVER 244
>gi|125601027|gb|EAZ40603.1| hypothetical protein OsJ_25064 [Oryza sativa Japonica Group]
Length = 335
Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 70/245 (28%), Positives = 119/245 (48%), Gaps = 14/245 (5%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+VA + P HI IMDGN R+A R + +GHR G + E+G+K +T+
Sbjct: 75 IVAVLSYGPMPKHIAFIMDGNRRYAKFRSIQEGSGHRMGFSALIASLLYCYEMGVKYITV 134
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI+N++R ++E+ L++L++ + + + + K N K+ G L + +
Sbjct: 135 YAFSIDNFKRDLTEVKSLMELMEEKINELLENRNVINKVNCKINFWGKLDMLSEPVRVAA 194
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSH-----------DVD 166
++ T N GL + Y+S EI A+ + + D+
Sbjct: 195 EKLMVSTAENKGLVFSVCMPYNSTSEIVIAVNKVCAERRDILQREDVDSVANNGVHSDIS 254
Query: 167 SSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHAL 226
+ + ++ ++ PDPD++IRT GE RLS+FLLWQ +S WP+FS + A+
Sbjct: 255 VADLDHHMYSAGCPDPDIVIRTSGETRLSNFLLWQTTFSHLQNPDPLWPEFSFKHLVWAI 314
Query: 227 NQYNL 231
QY
Sbjct: 315 LQYQR 319
>gi|225719016|gb|ACO15354.1| Dehydrodolichyl diphosphate synthase [Caligus clemensi]
Length = 282
Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 71/233 (30%), Positives = 124/233 (53%), Gaps = 5/233 (2%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
++ + + S P H+ IMDGN R+A + GH G + +E + ++G++ +T++
Sbjct: 37 LSILRTGSLPRHVAFIMDGNRRFARKSQVDLIKGHSSGFDKLSETLFWCRDLGVEEVTVY 96
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKK---GFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
AFSI N++RP EI +L++L ++ ++ + L++ ++V+V+G L D+ +
Sbjct: 97 AFSIENFKRPQKEIDDLMELAQNKFERMLSEIHRLREKGVRVQVLGKLSLLPQDLQNTIH 156
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
+ + T+ + L +AF Y+SR+E++ AI D S D+D + +Y
Sbjct: 157 QCVEATKDHKECTLNVAFAYTSREELTSAISLAASDSSSNVQ--EDLDVKSLERYFYGEG 214
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
DL+IRT GE RLSDF+LWQ +Y+ F WP+F F A+ Y
Sbjct: 215 SRKVDLLIRTSGEVRLSDFMLWQGSYAVTYFTKVLWPEFKVTHFMGAIFHYQH 267
>gi|269959130|ref|YP_003328919.1| undecaprenyl pyrophosphate synthase [Anaplasma centrale str.
Israel]
gi|269848961|gb|ACZ49605.1| undecaprenyl pyrophosphate synthase [Anaplasma centrale str.
Israel]
Length = 232
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 85/238 (35%), Positives = 134/238 (56%), Gaps = 8/238 (3%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
S M P H+ IIMDGN RWA +RGLP+ + KG+ ++V A IK+LT++A
Sbjct: 1 MSAMVHKLPRHVAIIMDGNRRWAESRGLPQMEAYTKGLSAAEKVVEACIGHSIKHLTLYA 60
Query: 63 FSINNWRRPVSEISELVKLIKSFLK--KGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
FS+ NW R E+S+++ + S+L + +R +G+ L D++ ++ +
Sbjct: 61 FSMENWFRNTEEVSDIMGMFASYLSSPELRKLADDYGASIRFVGDLKLLRIDVVELMFDI 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ TR N L L +A +Y +R +I +A+ VD ++ ++ T +P
Sbjct: 121 QSVTRNNDALCLNVAVSYGARQDIIQAVNAAL------DSGIESVDGEMLNSFMWTKGLP 174
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
D DL+IR+GGEKRLS+FLLWQ+AY+E F WPDF+ F +AL+ Y R+R++G
Sbjct: 175 DVDLLIRSGGEKRLSNFLLWQLAYAELYFCDTMWPDFTAAHFSNALDNYLARNRKYGR 232
>gi|329948136|ref|ZP_08295008.1| di-trans,poly-cis-decaprenylcistransferase-like protein
[Actinomyces sp. oral taxon 170 str. F0386]
gi|328522869|gb|EGF49974.1| di-trans,poly-cis-decaprenylcistransferase-like protein
[Actinomyces sp. oral taxon 170 str. F0386]
Length = 268
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 75/257 (29%), Positives = 127/257 (49%), Gaps = 22/257 (8%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ A + ++ P H+G+I+DGN RWA + G GH++G + E + A + G++ +T+
Sbjct: 15 LAARIDPATVPHHVGVILDGNRRWAKSMGFGAAQGHKRGADKIEEFLGWAEQTGVEVVTL 74
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N R +E+S L+ +I + + + +R++G L + + L+ A
Sbjct: 75 WLLSTDNLSRDPAELSPLLDIIAHAVDELAET---GRWSLRLVGAVDLLPEPLAERLRAA 131
Query: 121 EDQTR---------------LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV 165
++R + + + IA Y R EI+ A++ + ++ + +V
Sbjct: 132 VAKSRPEAAEAGEGAGKVAGEDRRMQVNIAVGYGGRQEIADAVRELLRERAAAGASLEEV 191
Query: 166 ----DSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSREL 221
I +L T PDPDL+IRT GE+RLS FLLWQ +SE+ F WP F R
Sbjct: 192 AASLSEEDITDHLYTKGQPDPDLVIRTSGEQRLSGFLLWQSVHSEYYFCEVNWPAFRRVD 251
Query: 222 FFHALNQYNLRDRRFGG 238
F AL + R+RR G
Sbjct: 252 FLRALRDFASRERRLGR 268
>gi|326772301|ref|ZP_08231586.1| undecaprenyl diphosphate synthase [Actinomyces viscosus C505]
gi|326638434|gb|EGE39335.1| undecaprenyl diphosphate synthase [Actinomyces viscosus C505]
Length = 275
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 75/264 (28%), Positives = 129/264 (48%), Gaps = 29/264 (10%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ A + ++ P H+G+I+DGN RWA + G GH++G + E + A ++G++ +T+
Sbjct: 15 LAARIDPATVPHHVGVILDGNRRWAKSMGFGAAQGHKRGADKIEEFLGWAEQMGVQVVTL 74
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N R +E+S L+ +I + + + +R++G L + + L+ A
Sbjct: 75 WLLSTDNLSRDPAELSPLLDIIAHAVDELAET---GRWSLRLVGAVDLLPEPLAERLRAA 131
Query: 121 EDQTR----------------------LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESG 158
++R + + + IA Y R EI+ A++ + ++ +
Sbjct: 132 VVRSRPTSAEASEQGGPAGEAAKVAEAGDRRMQVNIAVGYGGRQEIADAVRELLRERAAA 191
Query: 159 SVCSHDV----DSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYW 214
+V I ++L T PDPDL+IRT GE+RLS FLLWQ +SE+ F W
Sbjct: 192 GASLEEVAASLSEEDITEHLYTKGQPDPDLVIRTSGEQRLSGFLLWQSVHSEYYFCEVNW 251
Query: 215 PDFSRELFFHALNQYNLRDRRFGG 238
P F R F AL + R+RR G
Sbjct: 252 PAFRRVDFLRALRDFASRERRLGR 275
>gi|146343873|ref|YP_001208921.1| undecaprenyl pyrophosphate synthase [Bradyrhizobium sp. ORS278]
gi|146196679|emb|CAL80706.1| Undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans,poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS)
[Bradyrhizobium sp. ORS278]
Length = 246
Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats.
Identities = 97/231 (41%), Positives = 131/231 (56%), Gaps = 11/231 (4%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+GIIMDGNGRWA +G+ R GH G+E IV AA + GI LT++AFS +NWRRP
Sbjct: 17 HVGIIMDGNGRWATRKGMSRLRGHEAGVEAIRRIVEAAPDQGIGTLTLYAFSSDNWRRPR 76
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+E++ L+ L++ +L SL +N +++ VIG R L I + AE TR L+L
Sbjct: 77 AEVAALMALLRVYLASEVESLVRNGVRLNVIGRRDRLPGGIADAIARAEQATRDGRTLHL 136
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT--SDVPDPDLIIRTGG 190
IA +YS+RD I A + + + L T + + D DLIIRT G
Sbjct: 137 RIAVDYSARDAILNAAAK--------AGSIEGLTRQTFSD-LVTGEAGLRDVDLIIRTSG 187
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E+RLSDFLLW+ AY+E F WPDF AL ++ R+RRFGGL
Sbjct: 188 EQRLSDFLLWEGAYAELHFTDRMWPDFDAADLAEALASFHGRERRFGGLEA 238
>gi|169860188|ref|XP_001836730.1| dehydrodolichyl diphosphate synthetase [Coprinopsis cinerea
okayama7#130]
gi|116502247|gb|EAU85142.1| dehydrodolichyl diphosphate synthetase [Coprinopsis cinerea
okayama7#130]
Length = 261
Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats.
Identities = 71/238 (29%), Positives = 118/238 (49%), Gaps = 9/238 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + + P H+ +MDGN R+A GH +G ++ +G+ +T+
Sbjct: 17 IIKILAAGPVPKHVAFVMDGNRRYARKHQKEIPQGHSEGFVALKRVLEVCLYLGVSCVTV 76
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AF+I+N++R E+ L+ L ++ L + L K +++ V+G + L + + +
Sbjct: 77 YAFAIDNFKRSPEEVDALMHLAETKLVELCEHGDLLDKYGVRLNVLGRKELLPEPVRAAI 136
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT- 176
+AED TR N L + Y SRDEI+ A+++ Q+ G V I L T
Sbjct: 137 AKAEDMTRNNKRAILNVCMPYGSRDEITTAVQSSVQNAMEGDCV---VTEEDIESNLMTT 193
Query: 177 -SDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFFHALNQYNLR 232
+ P D++IRT G KRLSDFLLWQ ++ F +WPDF+ F L Y +
Sbjct: 194 LGNSPPLDILIRTSGVKRLSDFLLWQCCEDTQIHFTDTFWPDFALTDFIPILLDYQRK 251
>gi|295098989|emb|CBK88078.1| Undecaprenyl pyrophosphate synthetase [Eubacterium cylindroides
T2-87]
Length = 217
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 89/216 (41%), Positives = 125/216 (57%), Gaps = 4/216 (1%)
Query: 26 AARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSF 85
RGLPR AGH++G + + AA E+G+K L ++AFS NW+RP E+ L KL F
Sbjct: 6 KQRGLPRTAGHKQGADTIRTVALAANELGVKKLILYAFSTENWKRPEDEVGYLCKLPGLF 65
Query: 86 LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEIS 145
K L + NI+V G D V+ A + T NTGL L +A NY SR EI
Sbjct: 66 FNKYIRELMEKNIRVTFAGELERFPSDTQKVINRAVNDTSHNTGLELCLAINYGSRREIL 125
Query: 146 RAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYS 205
I+ ++++G +D+ ++YL + D DL+IRT GE R+S+FLLWQ+AYS
Sbjct: 126 LGIQKYADEVKNGRK--NDLTEEDFSQYLFVPE--DIDLMIRTSGEVRISNFLLWQLAYS 181
Query: 206 EFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
E +F P WPDF++E + ++ RDRRFGGL+K
Sbjct: 182 ELIFTPVAWPDFNKEELVKCIEEFKHRDRRFGGLTK 217
>gi|222480474|ref|YP_002566711.1| undecaprenyl diphosphate synthase [Halorubrum lacusprofundi ATCC
49239]
gi|222453376|gb|ACM57641.1| undecaprenyl diphosphate synthase [Halorubrum lacusprofundi ATCC
49239]
Length = 340
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 76/228 (33%), Positives = 117/228 (51%), Gaps = 4/228 (1%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ II DGN R+A RG GHR G ++ A++G+ LT++AFS N+
Sbjct: 24 VPTHVAIIQDGNRRYARERGDNAPDGHRAGAATTERVLDWCADLGVAELTLYAFSTENFE 83
Query: 70 RPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
RP E+ L L+++ L+ + + ++VR IG+ L + + + AE +T N
Sbjct: 84 RPDEELEPLFDLLETKLRDFADADRVHEQGVRVRAIGDVDRLPERVRDAVDYAERRTADN 143
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L +A Y R E+ A I +D+++G + DVD + + L V D DLI+R
Sbjct: 144 DRFTLNVALAYGGRTELLDAATAIARDVDAGDLDPTDVDVETVEERLYDRPVRDVDLIVR 203
Query: 188 TGGEKRLSDFLLWQVAYSE--FVFIPEYWPDFSRELFFHALNQYNLRD 233
TGG++R S+FL W +E F YWP+FS F A+ Y R+
Sbjct: 204 TGGDERTSNFLPWHANGNEAAVYFCAPYWPEFSEVEFLRAIRTYQSRE 251
>gi|55378477|ref|YP_136327.1| undecaprenyl pyrophosphate synthetase [Haloarcula marismortui ATCC
43049]
gi|55231202|gb|AAV46621.1| undecaprenyl pyrophosphate synthetase [Haloarcula marismortui ATCC
43049]
Length = 308
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 70/230 (30%), Positives = 117/230 (50%), Gaps = 4/230 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S PDH+ +IMDGN R+A +G + GH++G + ++ E+GI+ +T++ FS N
Sbjct: 26 SGTPDHVAVIMDGNRRYAEKQGTKKQEGHKEGAQTTEALLNWCDELGIREVTLYTFSTEN 85
Query: 68 WRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
+ R E + L++ L+ + + + +R IG L + + + AE +T
Sbjct: 86 FDRDPEEREHIFDLVEQKLRTFADADRVHEAGVCIRAIGETEMLPERVRDAIDYAEGRTA 145
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
LNL IA Y R E+ A +++ +E+ ++ DV + I + L D DLI
Sbjct: 146 QYDQLNLNIALAYGGRAELLGAARDVAAAVENETLDPTDVSAETIEERLYEGPTRDVDLI 205
Query: 186 IRTGGEKRLSDFLLWQVAYSE--FVFIPEYWPDFSRELFFHALNQYNLRD 233
+RTGG++R S+FL W +E F YWP+F + F A+ Y R+
Sbjct: 206 VRTGGDERTSNFLPWHANGNEAATFFCTPYWPEFRKVDFLRAIRTYQNRE 255
>gi|73920261|sp|Q5V1I1|UPPS_HALMA RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
Length = 304
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 70/230 (30%), Positives = 117/230 (50%), Gaps = 4/230 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S PDH+ +IMDGN R+A +G + GH++G + ++ E+GI+ +T++ FS N
Sbjct: 22 SGTPDHVAVIMDGNRRYAEKQGTKKQEGHKEGAQTTEALLNWCDELGIREVTLYTFSTEN 81
Query: 68 WRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
+ R E + L++ L+ + + + +R IG L + + + AE +T
Sbjct: 82 FDRDPEEREHIFDLVEQKLRTFADADRVHEAGVCIRAIGETEMLPERVRDAIDYAEGRTA 141
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
LNL IA Y R E+ A +++ +E+ ++ DV + I + L D DLI
Sbjct: 142 QYDQLNLNIALAYGGRAELLGAARDVAAAVENETLDPTDVSAETIEERLYEGPTRDVDLI 201
Query: 186 IRTGGEKRLSDFLLWQVAYSE--FVFIPEYWPDFSRELFFHALNQYNLRD 233
+RTGG++R S+FL W +E F YWP+F + F A+ Y R+
Sbjct: 202 VRTGGDERTSNFLPWHANGNEAATFFCTPYWPEFRKVDFLRAIRTYQNRE 251
>gi|220921623|ref|YP_002496924.1| undecaprenyl pyrophosphate synthase [Methylobacterium nodulans ORS
2060]
gi|219946229|gb|ACL56621.1| undecaprenyl diphosphate synthase [Methylobacterium nodulans ORS
2060]
Length = 233
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 94/227 (41%), Positives = 127/227 (55%), Gaps = 12/227 (5%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IMDGNGRWA ARGLPR AGHR G+E + AA ++GI LT+FAFS +NWRRP
Sbjct: 12 HVAAIMDGNGRWATARGLPRTAGHRAGVEAIRRVAEAAPDLGIGTLTLFAFSSDNWRRPP 71
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+E++ L+ L++ +L+ L + ++ VIG R L + L AE +T L+L
Sbjct: 72 AEVAGLMSLLRRYLRHETGRLARTGTRLTVIGRRDRLPAGLPDALARAEAETEGGERLHL 131
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA +YS + + + L + VPD DL+IR+GGEK
Sbjct: 132 RIAVDYS---------ARDAILAAAAAGIPE--SREAFGRLL-SGGVPDVDLLIRSGGEK 179
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLSDFLLW+ AY+E F WPDF + AL + R+RRFGGL
Sbjct: 180 RLSDFLLWECAYAELHFSDRMWPDFGPDDLAGALRDFAGRERRFGGL 226
>gi|224004994|ref|XP_002296148.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209586180|gb|ACI64865.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 240
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 72/236 (30%), Positives = 118/236 (50%), Gaps = 2/236 (0%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P H+ +IMDGN R+ + GH G + E GI+ LT++AFS
Sbjct: 5 VDTQYLPRHVAVIMDGNRRYGKQKYGNATRGHWDGSKTLIEFSKWCIAEGIETLTVYAFS 64
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNR-LSLDDDILCVLKEAEDQ 123
NW R +E+S L+ + + ++ I++RV+ + D+ + Q
Sbjct: 65 TENWDRDPAEVSALMSIFCKYCEELRVEAINRGIRIRVLATEEDRIPKDVQEGIGRMVSQ 124
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T T + I +Y +R EI A K+I +++SG + + + + + + T DPD
Sbjct: 125 TEHCTNFTMNICLSYGARGEIVNACKSIAMEVKSGQLDVNAIGEKELQQKMLTEHCRDPD 184
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQY-NLRDRRFGG 238
+IIRT GE+RLS+FLLWQ AYSE F+ + WP+ +E + + R RR+G
Sbjct: 185 VIIRTSGEERLSNFLLWQAAYSELFFLKKQWPELQKEDLLEVIRTFAQGRKRRYGK 240
>gi|301114427|ref|XP_002998983.1| undecaprenyl pyrophosphate synthetase, putative [Phytophthora
infestans T30-4]
gi|262111077|gb|EEY69129.1| undecaprenyl pyrophosphate synthetase, putative [Phytophthora
infestans T30-4]
Length = 308
Score = 232 bits (593), Expect = 3e-59, Method: Composition-based stats.
Identities = 77/245 (31%), Positives = 132/245 (53%), Gaps = 7/245 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M+ P HI +IMDGN R+ A+ GH G + + G++ LT+
Sbjct: 64 MLRDAGEQKIPRHIAVIMDGNRRYGKAKYGAGVRGHADGSKTLVNFTDWCIDAGMQALTV 123
Query: 61 FAFSIN--NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRV-IGNRLSLDDDILCVL 117
+AFS NW R SE+ L+ L F+ + K +++VRV + + L I+ +
Sbjct: 124 YAFSTGELNWNREQSEVDALMNLFNQFMHEIVPEALKRDVRVRVLVSDGRKLPAYIVEAI 183
Query: 118 KEAEDQTRLNTGLNLFIAFNYS----SRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKY 173
KE E +T+ + +L + Y +RDEI + I ++ G V D++ L+++
Sbjct: 184 KEIETKTQACSRFSLNLCVRYDIRYGARDEIVGVCRKIATEVAKGEVSVEDINEDLLSQR 243
Query: 174 LDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
+ T+ +PDPD++IRT GE R+S+FLL+Q+AY+E +F+ + WP+ +++ + ++N R
Sbjct: 244 MLTAGLPDPDILIRTSGELRISNFLLFQIAYTELIFMDKMWPEVTKDDVQDIIIEFNRRK 303
Query: 234 RRFGG 238
RRFG
Sbjct: 304 RRFGK 308
>gi|294462538|gb|ADE76815.1| unknown [Picea sitchensis]
Length = 318
Score = 232 bits (593), Expect = 3e-59, Method: Composition-based stats.
Identities = 72/258 (27%), Positives = 127/258 (49%), Gaps = 28/258 (10%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + + P H+ IIMDGN R+AA R + + +GH+ G + + ++GIK ++++
Sbjct: 41 IWIITAGPIPKHVAIIMDGNRRYAARRQMEKTSGHQFGYDSLMHTLRDCFDLGIKCVSVY 100
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLK---KNNIKVRVIGNRLSLDDDILCVLK 118
AFSI N++R E++ L+ L++ L+ + I+V+V+G L + + +
Sbjct: 101 AFSIENFKRSKEEVATLMNLMQEKLEALIEKESMVTEYGIRVQVLGELSLLPESVRRAAE 160
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD-------------- 164
+A +R N L I Y+S EI +A++N+ ++ + + H+
Sbjct: 161 KAMAMSRGNEKAVLNIFAPYTSTQEIVKAVENVRHEVLTRKIEVHEKIHGFHSQDDDDGS 220
Query: 165 -----------VDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEY 213
V I ++L T+D +P L+IRT GE RLS+FLLWQ +++ P
Sbjct: 221 ITEEIHGLQSSVTEDEIERHLYTADCGEPQLLIRTSGEIRLSNFLLWQSSFTFLYVTPVL 280
Query: 214 WPDFSRELFFHALNQYNL 231
WP+FS A+ Y
Sbjct: 281 WPEFSFWQLVKAILDYQK 298
>gi|311900706|dbj|BAJ33114.1| putative undecaprenyl diphosphate synthase [Kitasatospora setae
KM-6054]
Length = 269
Score = 232 bits (593), Expect = 3e-59, Method: Composition-based stats.
Identities = 81/238 (34%), Positives = 126/238 (52%), Gaps = 8/238 (3%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ P HIG+IMDGN RWA RGL GHR G ++ +G++++T+F S
Sbjct: 33 AELPRHIGLIMDGNRRWARERGLADTRLGHRHGARHAGAVLGWCEALGVRHVTVFVCSAE 92
Query: 67 NW-RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
N RR +E++ L+++I+ L + + + +V + G+ +L D + L+ A D T
Sbjct: 93 NLERRGDAEVAFLMRVIEDVLAREL-AGPRPRWRVHLAGDPATLPDSTVRALRRAVDATA 151
Query: 126 LN-TGLNLFIAFNYSSRDEISRAI----KNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
TG +L +A Y R E+ A+ + ++ + IA++L T+ P
Sbjct: 152 HCATGAHLTLAVGYGGRQELVHAVRGLLNAHADTGRPVRALAEELTADHIARHLHTAGHP 211
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DPDL+IRT GE+R+S+FLLWQ AY+E F +WP F F A+ Y R RR+G
Sbjct: 212 DPDLVIRTSGEQRMSNFLLWQSAYAELYFADAHWPAFRELDFLRAVASYAARGRRYGR 269
>gi|225709932|gb|ACO10812.1| Dehydrodolichyl diphosphate synthase [Caligus rogercresseyi]
Length = 267
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 69/234 (29%), Positives = 123/234 (52%), Gaps = 6/234 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+++ + + + P H+ IMDGN R+A + GH G + +E + ++GI+ +T+
Sbjct: 20 LMSILQTGALPRHVAFIMDGNRRFARKSQVDLIRGHSSGFDKLSETLFWCRDLGIEEVTV 79
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKK---GFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++RP E+ EL++L + K+ LK+ ++V+V+GN L +D+ +
Sbjct: 80 YAFSIENFKRPQKEVQELMELAREKFKRLLSETERLKEKGVRVQVLGNLSLLPEDLQKTI 139
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+ + T+ + L +AF Y+SR+E++ +I+ D S + ++ + Y
Sbjct: 140 GQCVNATKGHNKCTLNVAFAYTSREELTSSIRRAATDPSSQNTT---LNPKSLENYFYGE 196
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
DL+IRT GE RLSDF+LWQ +Y+ F WP+F + Y
Sbjct: 197 GSRRVDLLIRTSGEVRLSDFMLWQSSYAVTYFTQVLWPEFRLTHLMAGIFHYQH 250
>gi|21234207|ref|NP_639818.1| putative bifunctional undecaprenyl pyrophosphate
synthetase/phytoene synthase [Streptomyces coelicolor
A3(2)]
gi|42558905|sp|Q9ACU1|CRUP_STRCO RecName: Full=Bifunctional protein CrtB/UppS; Includes: RecName:
Full=Phytoene synthase; Includes: RecName:
Full=Undecaprenyl pyrophosphate synthase 3; Short=UPP
synthase 3; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase 3;
AltName: Full=Undecaprenyl diphosphate synthase 3;
Short=UDS 3
gi|13620694|emb|CAC36733.1| putative bifunctional undecaprenyl pyrophosphate
synthetase/phytoene synthase [Streptomyces coelicolor
A3(2)]
Length = 564
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 81/232 (34%), Positives = 128/232 (55%), Gaps = 1/232 (0%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
P HI +I DGN RWA ARGL GHR GI +V AA GI+++T++ FS
Sbjct: 317 PGPVPGHIAVIADGNRRWAEARGLLADQGHRAGIRAVLRLVNAAQRTGIRHVTVYMFSTE 376
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW R E++ L + +G ++ + ++VR G R L++ + + E T
Sbjct: 377 NWYRSQGEVAALFGAFADWFARGAQTVHELGVRVRWSGRRDRLEESLASSFELLESMTAN 436
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N L L I +Y R+E++ A + + + +G++ + + +A++L ++PD DL++
Sbjct: 437 NDKLTLTICLDYGGREELAAAARALAAEAVAGTIRPEQIGMAEVARHLYVPEMPDVDLLV 496
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
RT E+R+S+FL W +AY+E VF P WPDF A++ Y R+RRFGG
Sbjct: 497 RTC-EQRISNFLPWHLAYAELVFDPAPWPDFDLARLRDAVDSYAGRERRFGG 547
>gi|320532420|ref|ZP_08033256.1| di-trans,poly-cis-decaprenylcistransferase-like protein
[Actinomyces sp. oral taxon 171 str. F0337]
gi|320135367|gb|EFW27479.1| di-trans,poly-cis-decaprenylcistransferase-like protein
[Actinomyces sp. oral taxon 171 str. F0337]
Length = 275
Score = 232 bits (592), Expect = 4e-59, Method: Composition-based stats.
Identities = 75/264 (28%), Positives = 129/264 (48%), Gaps = 29/264 (10%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ A + ++ P H+G+I+DGN RWA + G GH++G + E + A ++G++ +T+
Sbjct: 15 LAARIDPATVPHHVGVILDGNRRWAKSMGFGAAQGHKRGADKIEEFLGWAEQMGVQVVTL 74
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N R +E+S L+ +I + + + +R++G L + + L+ A
Sbjct: 75 WLLSTDNLSRDPAELSPLLDIIAHAVDELAET---GRWSLRLVGAVDLLPEPLAERLRAA 131
Query: 121 EDQTR----------------------LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESG 158
++R + + + IA Y R EI+ A++ + ++ +
Sbjct: 132 VVRSRPASAGASESDGAAGHAVKTAEVEDRRMQVNIAVGYGGRQEIADAVRELLRERAAA 191
Query: 159 SVCSHDV----DSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYW 214
+V I ++L T PDPDL+IRT GE+RLS FLLWQ +SE+ F W
Sbjct: 192 GASLEEVAASLSEEDITEHLYTKGQPDPDLVIRTSGEQRLSGFLLWQSVHSEYYFCEVNW 251
Query: 215 PDFSRELFFHALNQYNLRDRRFGG 238
P F R F AL + R+RR G
Sbjct: 252 PAFRRVDFLRALRDFAGRERRLGR 275
>gi|294495894|ref|YP_003542387.1| undecaprenyl pyrophosphate synthetase [Methanohalophilus mahii DSM
5219]
gi|292666893|gb|ADE36742.1| Undecaprenyl pyrophosphate synthetase [Methanohalophilus mahii DSM
5219]
Length = 295
Score = 232 bits (592), Expect = 4e-59, Method: Composition-based stats.
Identities = 83/240 (34%), Positives = 130/240 (54%), Gaps = 7/240 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + +S P HI IIMDGN R+A G GH +G ++ +++ + E GIK LTI
Sbjct: 17 LEKDIRNSKLPQHIAIIMDGNRRYAKKLGKFTSYGHTRGADITEKVIEWSYENGIKELTI 76
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFS N+ R E ++KLI + L++ K +KVR+IG+R L D+L +
Sbjct: 77 YAFSTENFSRKKDEKKSILKLIGTRLEEMCVDERTHKRRLKVRIIGDRDLLPGDLLQSID 136
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD--- 175
+ E T+ L L IA Y R +I +AI+ + + ++ G + + ++ I+++L
Sbjct: 137 KVEMATKDYDSLKLNIAIAYGGRQDIIQAIREVARKVKVGDIKTGEITEKTISRHLYPEE 196
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEF--VFIPEYWPDFSRELFFHALNQYNLRD 233
S V + DLIIRTGG +R+S+FL WQ +E F YWPDF + F ++ Y R
Sbjct: 197 NSPVSNVDLIIRTGGNERVSNFLPWQACGNECAAYFCAPYWPDFRKIDFLRSIRTYQQRQ 256
>gi|332796574|ref|YP_004458074.1| undecaprenyl diphosphate synthase [Acidianus hospitalis W1]
gi|332694309|gb|AEE93776.1| undecaprenyl diphosphate synthase [Acidianus hospitalis W1]
Length = 257
Score = 232 bits (591), Expect = 4e-59, Method: Composition-based stats.
Identities = 76/241 (31%), Positives = 121/241 (50%), Gaps = 3/241 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + S P H+GII DGN RWA + +G + E++ AE+G+K++T+
Sbjct: 17 LWNQIKSGPIPRHVGIIPDGNRRWARENNSSFNEAYLQGYKKLKEVLIWLAELGVKDVTV 76
Query: 61 FAFSINNW-RRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVL 117
FA S N +R E+S ++K IK + + K +KVR IG L +D+ +
Sbjct: 77 FALSTENCGKRSSQELSVILKYIKMGIDDLLTEDYIYKYKVKVRAIGQLHKLPEDLRLSI 136
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+++ +L +A Y R EI A+ + + + G + ++ KY
Sbjct: 137 SRVVEKSSSFNERSLTLAICYGGRQEILDAVAKLLDEYKKGLIKDIVLNEETFRKYFYDK 196
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
++ D DL+IRT GE R+S+FLLW +AYSE F YWP+F + + A+ Y R R FG
Sbjct: 197 ELEDIDLVIRTSGEMRISNFLLWHLAYSELFFCDAYWPEFRKIDLWRAIRSYQRRKRNFG 256
Query: 238 G 238
Sbjct: 257 A 257
>gi|302759657|ref|XP_002963251.1| hypothetical protein SELMODRAFT_404990 [Selaginella moellendorffii]
gi|300168519|gb|EFJ35122.1| hypothetical protein SELMODRAFT_404990 [Selaginella moellendorffii]
Length = 270
Score = 232 bits (591), Expect = 5e-59, Method: Composition-based stats.
Identities = 83/246 (33%), Positives = 137/246 (55%), Gaps = 9/246 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVF----NEIVAAAAEVGIK 56
+ A + P+H+ IIMDGN RWA ARG+ + R E EIV +++ GIK
Sbjct: 22 LPAEVDPLRLPNHVAIIMDGNSRWAKARGIAKERQLRAAAEACYSNAREIVRLSSDWGIK 81
Query: 57 NLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYS-LKKNNIKVRVIGNRLSLDDDILC 115
LT+FAFS N+ RP E+ + ++ L + + + I+ R IG+ L +
Sbjct: 82 ALTLFAFSTENFLRPREEVDQWMQQFDRVLSLDDPATILLDGIQFRCIGDTARLPRPLQA 141
Query: 116 VLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD 175
+ +A+ T NTG+ L +A Y +++ +A + + +++E G + ++D +AK L
Sbjct: 142 KISDAQSITSGNTGMKLVMAIGYGGHNDLVQACQALAREVEQGKMAVEEIDQINLAKRLM 201
Query: 176 TSDVPD----PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
+ + P+L++RT GE+RLS+F+LW +AYSE VF + WPDF +E + +AL ++
Sbjct: 202 LGERCEDVGAPELLVRTSGEQRLSNFMLWHLAYSELVFEKKLWPDFGKEEYKNALVEFQG 261
Query: 232 RDRRFG 237
R R FG
Sbjct: 262 RMRTFG 267
>gi|41408801|ref|NP_961637.1| hypothetical protein MAP2703c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|118463939|ref|YP_880457.1| short chain Z-isoprenyl diphosphate synthetase [Mycobacterium avium
104]
gi|41397160|gb|AAS05020.1| hypothetical protein MAP_2703c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|118165226|gb|ABK66123.1| short-chain Z-isoprenyl diphosphate synthetase [Mycobacterium avium
104]
Length = 264
Score = 232 bits (591), Expect = 5e-59, Method: Composition-based stats.
Identities = 77/237 (32%), Positives = 119/237 (50%), Gaps = 7/237 (2%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ P HI ++ DGN RWA G G+R G E++ GI+ T++ S
Sbjct: 30 KADLPRHIAVLCDGNRRWARDAGYDDVSYGYRMGAVKIAEMLRWCQAAGIEMTTVYLLST 89
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
N +R E++ L+++I +++ N VR +G+ L ++ L+ A + T
Sbjct: 90 ENLQRDPDELAGLIEIITDVVEE--ICAPANRWSVRTVGDLELLGEEPARRLRGAVESTP 147
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSDVPD 181
+ ++ +A Y R EI A++++ + + + V I++ L TS PD
Sbjct: 148 VEASFHVNVAVGYGGRREIVDAVRSLLSKELANGATAEELIDAVTVDAISENLYTSGQPD 207
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PDL+IRT GE+RLS FLLWQ AYSE F +WP F R F AL Y+ R RR+G
Sbjct: 208 PDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRRVDFLRALRDYSQRHRRYGK 264
>gi|126642018|ref|YP_001085002.1| undecaprenyl pyrophosphate synthetase [Acinetobacter baumannii ATCC
17978]
gi|184158416|ref|YP_001846755.1| undecaprenyl pyrophosphate synthase [Acinetobacter baumannii ACICU]
gi|183210010|gb|ACC57408.1| Undecaprenyl pyrophosphate synthase [Acinetobacter baumannii ACICU]
Length = 222
Score = 232 bits (591), Expect = 5e-59, Method: Composition-based stats.
Identities = 82/213 (38%), Positives = 131/213 (61%)
Query: 30 LPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKG 89
+ + GHR+G V + IV + G++ LT+FAFS NW RP E+ L+KL++ + +
Sbjct: 1 MQKGDGHREGKNVLDPIVEHCVKTGVRALTVFAFSSENWNRPQYEVDLLMKLLEETIHEQ 60
Query: 90 FYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIK 149
+KK NI +R IG+R L ++ ++++AE QT + + L IA +Y +I+ A K
Sbjct: 61 IPRMKKFNIALRFIGDRSRLPSHLVALMEDAEQQTAHHDAMTLTIAVSYGGMWDIANAAK 120
Query: 150 NIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVF 209
+ Q + G + + ++ L KY+ +D+P DL+IRTGG+ R+S+FLLWQ AY+E F
Sbjct: 121 QVAQAVSRGEIDADQINVDLFEKYVSLNDLPAVDLLIRTGGDFRISNFLLWQAAYAELYF 180
Query: 210 IPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
WP+F+ E F HALN ++ R+RRFG S++
Sbjct: 181 TDTLWPEFTVEEFDHALNVFSGRERRFGKTSEQ 213
>gi|254774094|ref|ZP_05215610.1| short-chain Z-isoprenyl diphosphate synthetase [Mycobacterium avium
subsp. avium ATCC 25291]
Length = 264
Score = 232 bits (591), Expect = 5e-59, Method: Composition-based stats.
Identities = 77/237 (32%), Positives = 119/237 (50%), Gaps = 7/237 (2%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ P HI ++ DGN RWA G G+R G E++ GI+ T++ S
Sbjct: 30 KADLPRHIAVLCDGNRRWARDAGYDDVSYGYRMGAVKIAEMLRWCQAAGIEMTTVYLLST 89
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
N +R E++ L+++I +++ N VR +G+ L ++ L+ A + T
Sbjct: 90 ENLQRDPDELAGLIEIITDVVEE--ICAPANRWSVRTVGDLELLGEEPARRLRGAVESTP 147
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSDVPD 181
+ ++ +A Y R EI A++++ + + + V I++ L TS PD
Sbjct: 148 VEASFHVNVAVGYGGRREIVDAVRSLLSKELANGATAEELIEAVTVDAISENLYTSGQPD 207
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PDL+IRT GE+RLS FLLWQ AYSE F +WP F R F AL Y+ R RR+G
Sbjct: 208 PDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRRVDFLRALRDYSQRHRRYGK 264
>gi|302551198|ref|ZP_07303540.1| long-chain Z-isoprenyl diphosphate synthase [Streptomyces
viridochromogenes DSM 40736]
gi|302468816|gb|EFL31909.1| long-chain Z-isoprenyl diphosphate synthase [Streptomyces
viridochromogenes DSM 40736]
Length = 596
Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats.
Identities = 85/234 (36%), Positives = 129/234 (55%), Gaps = 2/234 (0%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
S+ P H+ +IMDGNGRWA RGLPR GHR G E+V A ++G+++LT++ F
Sbjct: 358 SIPPGRLPTHVAVIMDGNGRWAQRRGLPRHEGHRAGAAAVREVVHGALDIGLRHLTLYTF 417
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW R E+ ++ L++S + + ++++R G L D++ +L E
Sbjct: 418 STENWNRGAQEVDAILGLLRSEVAD--DPFGELDVRLRWHGRARRLPSDLVELLHLRERT 475
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
TR TGL L + +Y RDE++R + + + +G + + A++L D+PD D
Sbjct: 476 TRTRTGLTLTMCIDYGGRDELTRTAAALARRVRAGHLDPDLITEEDFARHLPHPDMPDVD 535
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
L+ RTG E+R S+FL W AY+E F PE WPD R + A+ Y R RR G
Sbjct: 536 LLWRTGNEQRTSNFLPWHTAYAELHFTPELWPDVDRRHLWQAITTYTHRQRRHG 589
>gi|118468157|ref|YP_889502.1| undecaprenyl diphosphate synthase [Mycobacterium smegmatis str. MC2
155]
gi|118169444|gb|ABK70340.1| undecaprenyl diphosphate synthase [Mycobacterium smegmatis str. MC2
155]
Length = 263
Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats.
Identities = 78/238 (32%), Positives = 119/238 (50%), Gaps = 8/238 (3%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+ P HI ++ DGN RWA G G+RKG E++ GI+ TI+ S
Sbjct: 28 KAQLPRHIAVLCDGNRRWARDAGYDDVSIGYRKGAAKIAEMLRWCQAAGIEMATIYLLST 87
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSL-DDDILCVLKEAEDQT 124
N +R E++ L+++I +++ K +++ +G+ L D+ + + E T
Sbjct: 88 ENLQRDPDELTALIEIITDVVEEICAPYNKWSVR--TVGDLELLGDEPARRLREAVESTT 145
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKYLDTSDVP 180
++ +A Y R EI A++++ + + + ++ I++ L TS P
Sbjct: 146 TKGANFHVNVAVAYGGRQEIVDAVRSLLSKELANGATAEQLIEAVTVDGISENLYTSGQP 205
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DPDL+IRT GE+RLS FLLWQ AYSE F YWP F R F AL Y R RRFG
Sbjct: 206 DPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAYWPAFRRVDFLRALRDYTARHRRFGK 263
>gi|50309435|ref|XP_454725.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643860|emb|CAG99812.1| KLLA0E17205p [Kluyveromyces lactis]
Length = 275
Score = 231 bits (590), Expect = 6e-59, Method: Composition-based stats.
Identities = 78/229 (34%), Positives = 120/229 (52%), Gaps = 5/229 (2%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S P H+ IMDGN R+A + GH G E I+ E G+K T+FAFSI
Sbjct: 28 SDKVPQHVAFIMDGNRRFAKKNNMEVNEGHNAGFESMCRILELCYESGMKVATVFAFSIE 87
Query: 67 NWRRPVSEISELVKLIKSFLK---KGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
N++R E++ L++L K +K + ++ IKV++IG+R L D+L ++ AE+
Sbjct: 88 NFKRSTFEVNWLMELAKDKIKQISQHGELAEQYGIKVQIIGDRSLLPADVLKEVELAEEI 147
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T N+ L I F Y+ R+EI +I+ I ++ G + D+D I +L T P +
Sbjct: 148 TMNNSRAVLNICFPYTGREEIVHSIQGIMKETAMGEIDYRDIDEQTIEDHLYTQGQPPVE 207
Query: 184 LIIRTGGEKRLSDFLLWQVAY--SEFVFIPEYWPDFSRELFFHALNQYN 230
L+IRT G RLSDFLLWQ++ + WP+F+ L ++
Sbjct: 208 LLIRTSGVTRLSDFLLWQLSNRGCTIELVDCLWPEFTPFSMLKILIKFA 256
>gi|269976189|ref|ZP_06183185.1| undecaprenyl pyrophosphate synthetase 1 [Mobiluncus mulieris 28-1]
gi|269935518|gb|EEZ92056.1| undecaprenyl pyrophosphate synthetase 1 [Mobiluncus mulieris 28-1]
Length = 258
Score = 231 bits (590), Expect = 6e-59, Method: Composition-based stats.
Identities = 82/242 (33%), Positives = 122/242 (50%), Gaps = 8/242 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P HIGII+DGN RWA A G P GH++G E++ ++ +T+
Sbjct: 21 LAREIDPGKVPAHIGIILDGNRRWARAEGAPDVKGHQRGALKIREVLEWCEAWPVRVVTL 80
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ SI+N +R +E+ L I +++ + K ++RV+G+ +D + +L A
Sbjct: 81 WMLSIDNLQRDAAELEPLQDTIGKTVQRLQRAGKY---RLRVLGDTSLIDPKLAEILAAA 137
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGS----VCSHDVDSSLIAKYLDT 176
+T L + + IA Y R EI A+K + + ++ I +L T
Sbjct: 138 -HETGLAEAMVVNIAVAYGGRQEIVAAVKEYLHEQAAAGRGLAQVEREITLEDIEAHLYT 196
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
PDPDL+IRT GE+RLS FLLWQ A SEF F YWP F F AL Y+ R+RR
Sbjct: 197 KGQPDPDLVIRTSGEQRLSGFLLWQSANSEFYFCETYWPSFRHIDFLRALRDYSSRERRN 256
Query: 237 GG 238
G
Sbjct: 257 GK 258
>gi|86749805|ref|YP_486301.1| undecaprenyl diphosphate synthase [Rhodopseudomonas palustris HaA2]
gi|86572833|gb|ABD07390.1| Undecaprenyl pyrophosphate synthetase [Rhodopseudomonas palustris
HaA2]
Length = 239
Score = 231 bits (590), Expect = 6e-59, Method: Composition-based stats.
Identities = 98/227 (43%), Positives = 127/227 (55%), Gaps = 8/227 (3%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+GIIMDGNGRWA RGL R GH+ G+E ++ AA E GI LT+FAFS +NWRRP
Sbjct: 10 HVGIIMDGNGRWATRRGLSRLRGHQAGVEAIRRVMEAAPEQGIGTLTLFAFSSDNWRRPR 69
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
SE+S L+ L +S+L L N I++ +IG R L D + ++ AE T L L
Sbjct: 70 SEVSALMGLFRSYLVNEVKGLVDNGIRLTLIGRRDRLPDGLAETIERAEAATAAGDALAL 129
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA +YS+RD I A + + S + D DLIIRT GE+
Sbjct: 130 RIAVDYSARDTIVNAAVRAGGLQSCSR--------ETFSDLITGSKLRDVDLIIRTSGER 181
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
RLSDFLLW+ AY+E F WPDF A+ ++ R+RRFGGL
Sbjct: 182 RLSDFLLWESAYAELYFTDRMWPDFDANDLADAMASFHGRERRFGGL 228
>gi|31792277|ref|NP_854770.1| short (C15) chain Z-isoprenyl diphosphate synthase (Z-FPP synthase)
(Z-farnesyl diphosphate synthase) (Z-FPP synthetase)
(Z-farnesyl diphosphate synthetase)
(geranyltranstransferase) (farnesyl pyrophosphate
synthetase) [Mycobacterium bovis AF2122/97]
gi|121637015|ref|YP_977238.1| Short (C15) chain Z-isoprenyl diphosphate synthase [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|215426375|ref|ZP_03424294.1| Short (C15) chain Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T92]
gi|215429952|ref|ZP_03427871.1| Short (C15) chain Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis EAS054]
gi|215445243|ref|ZP_03431995.1| Short (C15) chain Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T85]
gi|219556964|ref|ZP_03536040.1| Short (C15) chain Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T17]
gi|224989488|ref|YP_002644175.1| short (C15) chain Z-isoprenyl diphosphate synthase [Mycobacterium
bovis BCG str. Tokyo 172]
gi|260186006|ref|ZP_05763480.1| short (C15) chain Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis CPHL_A]
gi|260204314|ref|ZP_05771805.1| short (C15) chain Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis K85]
gi|289446672|ref|ZP_06436416.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis CPHL_A]
gi|289569074|ref|ZP_06449301.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T17]
gi|289573729|ref|ZP_06453956.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis K85]
gi|289749619|ref|ZP_06508997.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T92]
gi|289753149|ref|ZP_06512527.1| short-chain Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis EAS054]
gi|289757171|ref|ZP_06516549.1| short chain z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T85]
gi|294993269|ref|ZP_06798960.1| short (C15) chain Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis 210]
gi|44888396|sp|Q7U0P8|ZFPP_MYCBO RecName: Full=Short-chain Z-isoprenyl diphosphate synthase;
AltName: Full=(2Z,6E)-farnesyl diphosphate synthase;
AltName: Full=Z-FPP synthase; AltName: Full=Z-isoprenyl
diphosphate synthase
gi|31617865|emb|CAD93975.1| SHORT (C15) CHAIN Z-ISOPRENYL DIPHOSPHATE SYNTHASE (Z-FPP SYNTHASE)
(Z-FARNESYL DIPHOSPHATE SYNTHASE) (Z-FPP SYNTHETASE)
(Z-FARNESYL DIPHOSPHATE SYNTHETASE)
(GERANYLTRANSTRANSFERASE) (FARNESYL PYROPHOSPHATE
SYNTHETASE) [Mycobacterium bovis AF2122/97]
gi|121492662|emb|CAL71131.1| Short (C15) chain Z-Isoprenyl diphosphate synthase [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|224772601|dbj|BAH25407.1| short (C15) chain Z-isoprenyl diphosphate synthase [Mycobacterium
bovis BCG str. Tokyo 172]
gi|289419630|gb|EFD16831.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis CPHL_A]
gi|289538160|gb|EFD42738.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis K85]
gi|289542828|gb|EFD46476.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T17]
gi|289690206|gb|EFD57635.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T92]
gi|289693736|gb|EFD61165.1| short-chain Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis EAS054]
gi|289712735|gb|EFD76747.1| short chain z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T85]
gi|326904689|gb|EGE51622.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis W-148]
Length = 262
Score = 231 bits (590), Expect = 6e-59, Method: Composition-based stats.
Identities = 77/237 (32%), Positives = 119/237 (50%), Gaps = 7/237 (2%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
S P HI ++ DGN RWA + G G+R G E++ E GI+ T++ S
Sbjct: 28 KSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWCHEAGIELATVYLLST 87
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
N +R E++ L+++I +++ N+ VR +G+ + ++ L+ A + T
Sbjct: 88 ENLQRDPDELAALIEIITDVVEE--ICAPANHWSVRTVGDLGLIGEEPARRLRGAVESTP 145
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSDVPD 181
++ +A Y R EI A++ + + + + V I++ L TS PD
Sbjct: 146 EVASFHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVDAVTVEGISENLYTSGQPD 205
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PDL+IRT GE+RLS FLLWQ AYSE F +WP F F AL Y+ R RR+G
Sbjct: 206 PDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDFLRALRDYSARHRRYGR 262
>gi|227876661|ref|ZP_03994770.1| undecaprenyl pyrophosphate synthetase [Mobiluncus mulieris ATCC
35243]
gi|307699880|ref|ZP_07636931.1| putative di-trans,poly-cis-decaprenylcistransferase [Mobiluncus
mulieris FB024-16]
gi|227842558|gb|EEJ52758.1| undecaprenyl pyrophosphate synthetase [Mobiluncus mulieris ATCC
35243]
gi|307614918|gb|EFN94136.1| putative di-trans,poly-cis-decaprenylcistransferase [Mobiluncus
mulieris FB024-16]
Length = 258
Score = 231 bits (590), Expect = 6e-59, Method: Composition-based stats.
Identities = 81/242 (33%), Positives = 121/242 (50%), Gaps = 8/242 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P HIGII+DGN RWA A G P GH++G E++ ++ +T+
Sbjct: 21 LAREIDPGKVPAHIGIILDGNRRWARAEGAPDVKGHQRGALKIREVLEWCEAWPVRVVTL 80
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ SI+N +R +E+ L I +++ + K ++RV+G+ +D + +L A
Sbjct: 81 WMLSIDNLQRDAAELEPLQDTIGKTVQRLQRAGKY---RLRVLGDTSLIDPKLAEILAAA 137
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGS----VCSHDVDSSLIAKYLDT 176
+T + + IA Y R EI A+K + + ++ I +L T
Sbjct: 138 -HETGPAEAMVVNIAVAYGGRQEIVAAVKEYLHEQAAAGRGLAQVEREITLEDIEAHLYT 196
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
PDPDL+IRT GE+RLS FLLWQ A SEF F YWP F F AL Y+ R+RR
Sbjct: 197 KGQPDPDLVIRTSGEQRLSGFLLWQSANSEFYFCETYWPSFRHIDFLRALRDYSSRERRN 256
Query: 237 GG 238
G
Sbjct: 257 GK 258
>gi|125983160|ref|XP_001355345.1| GA10557 [Drosophila pseudoobscura pseudoobscura]
gi|195169447|ref|XP_002025533.1| GL15247 [Drosophila persimilis]
gi|54643659|gb|EAL32402.1| GA10557 [Drosophila pseudoobscura pseudoobscura]
gi|194109012|gb|EDW31055.1| GL15247 [Drosophila persimilis]
Length = 303
Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats.
Identities = 77/230 (33%), Positives = 123/230 (53%), Gaps = 5/230 (2%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
P H+ +MDGN R+A ++ + + GH +G + + ++GI +T FAFSI N
Sbjct: 24 GHIPKHVAFVMDGNRRFARSQQIDKIEGHSRGFSKLADCLRWCLDLGINEVTTFAFSIEN 83
Query: 68 WRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
++R E+ L L + K L ++ I++RVIGN L D+ ++ A T
Sbjct: 84 FKRSSEEVEGLFNLARDKFAKLLKETDRLNQHGIRIRVIGNIGLLPLDLQELVATAMLST 143
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+N L L +AF+Y+SRDEI++A++ + Q S + ++ L+ + + T P PDL
Sbjct: 144 EVNDKLFLNVAFSYTSRDEITQALETVLQQGNSF-ISGSNISERLLEECMYTRHSPAPDL 202
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
I RT GE RLSDF++WQ++ S F WP + F ++ Y RDR
Sbjct: 203 IFRTSGETRLSDFMMWQLSGSVLYFSNVLWPQITFWNFLASILAYQ-RDR 251
>gi|302786458|ref|XP_002975000.1| hypothetical protein SELMODRAFT_102749 [Selaginella moellendorffii]
gi|300157159|gb|EFJ23785.1| hypothetical protein SELMODRAFT_102749 [Selaginella moellendorffii]
Length = 310
Score = 231 bits (589), Expect = 7e-59, Method: Composition-based stats.
Identities = 75/251 (29%), Positives = 120/251 (47%), Gaps = 18/251 (7%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
V ++ P HI IIMDGN R+A G+ R +GH G + + + ++G++ +T++
Sbjct: 18 VRILLCGPVPQHIAIIMDGNRRFADRAGIDRKSGHGFGYDSLIQTLELCLDLGVRYVTVY 77
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLK 118
AFSI+N+ R E+S L++L++ L + I+V V+G+ L +D+
Sbjct: 78 AFSIDNFARSQEEVSALMELMREKLDLLVSNEGLATAKGIRVCVLGDLTLLPEDVRASAN 137
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCS---------------H 163
A T+ N+ L I Y+S EI A + ++ S
Sbjct: 138 RAMAATKHNSITVLNICVAYTSTQEIVNATREAVKEALGLSSSKVLDSYFLSSFLFTLDS 197
Query: 164 DVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFF 223
+ I ++L T+ P PD++IRT GE RLS+F+LWQ +S F WP+FS F
Sbjct: 198 QITKESIERHLYTAGSPWPDVLIRTSGETRLSNFMLWQACHSHLAFCNVLWPNFSFRHLF 257
Query: 224 HALNQYNLRDR 234
+ QY R
Sbjct: 258 WIIFQYQKSYR 268
>gi|145591532|ref|YP_001153534.1| undecaprenyl diphosphate synthase [Pyrobaculum arsenaticum DSM
13514]
gi|145283300|gb|ABP50882.1| Undecaprenyl pyrophosphate synthetase [Pyrobaculum arsenaticum DSM
13514]
Length = 238
Score = 231 bits (589), Expect = 8e-59, Method: Composition-based stats.
Identities = 85/237 (35%), Positives = 133/237 (56%), Gaps = 9/237 (3%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVG-IKNLTIFAFSI 65
S P HI +I DGN R+A GL +++G+E + A E G IKN+T +A S
Sbjct: 6 SVKVPRHIAVIPDGNRRYAKKVGLDFYHAYKRGVEKVRSFLTWALEFGDIKNVTFYALST 65
Query: 66 NNWRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
N +R E+ L ++ + KK + +N +++R IG+R + ++ +++E E
Sbjct: 66 ENLQRSRVELEILFRIFEEEFKKTIEDPLIHENKVRIRFIGDRSIIPGRLVKLMEELESA 125
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP--D 181
T + +L A Y R EI R +K I SG V +++ + + LDT D+P +
Sbjct: 126 TSSYSERHLTFALGYGGRAEIVRCVKRII----SGEVKLAEINEESLFQCLDTRDLPNPE 181
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PD++IRTGGEKRLS+FLL+Q AYSE +F+ + WP+ RE + + +Y+ R RRFG
Sbjct: 182 PDVVIRTGGEKRLSNFLLYQTAYSELIFLDKLWPEIEREDLLYVVEEYSRRQRRFGK 238
>gi|226530156|ref|NP_001151824.1| undecaprenyl pyrophosphate synthetase [Zea mays]
gi|195650007|gb|ACG44471.1| undecaprenyl pyrophosphate synthetase [Zea mays]
Length = 313
Score = 231 bits (589), Expect = 8e-59, Method: Composition-based stats.
Identities = 85/243 (34%), Positives = 133/243 (54%), Gaps = 6/243 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + + S P H+G+++DG+ RWA ARGL GH G V + GI+ LT+
Sbjct: 68 LHSGVRAESLPRHVGLVIDGHARWARARGLSVSEGHAVGRRTVEHTVRLSRAWGIRVLTV 127
Query: 61 FAFSINNWR-RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
FA S N RP +E+ ++L + F++ + I++ +IG+ L +L +E
Sbjct: 128 FACSHENMTTRPKAEMDFFMQLYEGFIRDNVDQFCREGIRLHLIGDSPGLPASLLRAARE 187
Query: 120 A-EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS- 177
A + T+ + + L +A YS R +I RA + + +++ + D+D +LIA L TS
Sbjct: 188 ANQLATQSESEMVLMLAMGYSGRRDILRACQELATEVQRNLLRPEDIDEALIAGKLGTSI 247
Query: 178 ---DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
++ PDL+IRT GE RLS+FLLWQ A++E F WPDF + + AL Y R R
Sbjct: 248 AGGELSYPDLVIRTSGELRLSNFLLWQSAFAELFFSDVMWPDFGEDEYLGALRSYQTRQR 307
Query: 235 RFG 237
RFG
Sbjct: 308 RFG 310
>gi|306817611|ref|ZP_07451354.1| undecaprenyl diphosphate synthase [Mobiluncus mulieris ATCC 35239]
gi|304649653|gb|EFM46935.1| undecaprenyl diphosphate synthase [Mobiluncus mulieris ATCC 35239]
Length = 258
Score = 231 bits (589), Expect = 8e-59, Method: Composition-based stats.
Identities = 81/242 (33%), Positives = 121/242 (50%), Gaps = 8/242 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P HIGII+DGN RWA A G P GH++G E++ ++ +T+
Sbjct: 21 LAREIDPGKVPAHIGIILDGNRRWARAEGAPDVKGHQRGALKIREVLEWCEAWPVRVVTL 80
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ SI+N +R +E+ L I +++ + K ++RV+G+ +D + +L A
Sbjct: 81 WMLSIDNLQRDATELEPLQDTIGKTVQRLQRAGKY---RLRVLGDTSLIDPKLAEILAAA 137
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGS----VCSHDVDSSLIAKYLDT 176
+T + + IA Y R EI A+K + + ++ I +L T
Sbjct: 138 -HETGPAEAMVVNIAVAYGGRQEIVAAVKEYLHEQAAAGRGLAQVEREITLEDIEAHLYT 196
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
PDPDL+IRT GE+RLS FLLWQ A SEF F YWP F F AL Y+ R+RR
Sbjct: 197 KGQPDPDLVIRTSGEQRLSGFLLWQSANSEFYFCETYWPSFRHIDFLRALRDYSSRERRN 256
Query: 237 GG 238
G
Sbjct: 257 GK 258
>gi|297572049|ref|YP_003697823.1| undecaprenyl diphosphate synthase [Arcanobacterium haemolyticum DSM
20595]
gi|296932396|gb|ADH93204.1| undecaprenyl diphosphate synthase [Arcanobacterium haemolyticum DSM
20595]
Length = 252
Score = 230 bits (588), Expect = 9e-59, Method: Composition-based stats.
Identities = 83/242 (34%), Positives = 130/242 (53%), Gaps = 7/242 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + S P H+GII+DGN RWA A G P GHRKG + E++ E G+ +T+
Sbjct: 14 LARQIRQSQIPRHVGIILDGNRRWAKALGTPAAHGHRKGADHITEVLGWVQEAGVSIVTL 73
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N +R EI EL+ +I +++ ++RV+G+ L DD L+ A
Sbjct: 74 WMLSTDNLQRSAKEIRELLAIIVGAVEQL---AANPQWQIRVLGDLDLLPDDAAAALRAA 130
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDT 176
++T + G+ + +A Y R EI+RA+++ ++ + + I ++ T
Sbjct: 131 AERTSAHDGMIVNVAIGYGGRQEITRAVQDYLREQAQSGATLEEVASSITVDAITNHMYT 190
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
PDPDLIIRT GE+R+S F+LWQ ++E F YWPDF R AL +++RDRR
Sbjct: 191 KGQPDPDLIIRTSGEQRMSGFMLWQTVHTELYFCETYWPDFRRTDLLRALRDFSVRDRRK 250
Query: 237 GG 238
G
Sbjct: 251 GK 252
>gi|303325663|ref|ZP_07356106.1| di-trans,poly-cis-decaprenylcistransferase [Desulfovibrio sp.
3_1_syn3]
gi|302863579|gb|EFL86510.1| di-trans,poly-cis-decaprenylcistransferase [Desulfovibrio sp.
3_1_syn3]
Length = 216
Score = 230 bits (588), Expect = 9e-59, Method: Composition-based stats.
Identities = 81/209 (38%), Positives = 116/209 (55%), Gaps = 4/209 (1%)
Query: 34 AGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSL 93
AGHR G E +V +GI++LT++AFS NW RP SEIS L L+ FL++ +
Sbjct: 8 AGHRAGAEAVRTVVTECRGLGIRHLTLYAFSSENWNRPKSEISALFSLLLEFLRREVPLM 67
Query: 94 KKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQ 153
++ I ++V+G+ L L+ A +T + L +A NY R E+ RA++ +
Sbjct: 68 EEKGIALKVLGDLEGLPLPQRTALRHAMGRTEAGREMTLNLALNYGGRAELVRAVRGFLR 127
Query: 154 DIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEY 213
D DV +A+ L T+ PDPDL+IRT GE+RLS++LL+Q AYSE F P
Sbjct: 128 DNAR----PEDVTEESLAQGLYTAGQPDPDLLIRTSGEQRLSNYLLYQCAYSELYFTPVP 183
Query: 214 WPDFSRELFFHALNQYNLRDRRFGGLSKK 242
WPDF + AL Y R RRFG ++
Sbjct: 184 WPDFGADQLREALAVYAGRSRRFGKTQEQ 212
>gi|148261723|ref|YP_001235850.1| undecaprenyl diphosphate synthase [Acidiphilium cryptum JF-5]
gi|146403404|gb|ABQ31931.1| Undecaprenyl pyrophosphate synthetase [Acidiphilium cryptum JF-5]
Length = 283
Score = 230 bits (588), Expect = 1e-58, Method: Composition-based stats.
Identities = 80/245 (32%), Positives = 127/245 (51%), Gaps = 7/245 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ + + P H+GII+DGN R A GL +R G +EI+A +AE+GI +T
Sbjct: 39 LAREVAAGPLPRHVGIILDGNRRHARLAGLSDPGEIYRLGAAKLDEILAWSAELGIPMIT 98
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVL 117
++ FS N RP +E+ ++ +++ ++ ++ +++ IG R L +L +
Sbjct: 99 LWVFSPANLGRPEAEVGGILGAVEAKMRALVADPHIRSRGVRLAAIGRRDILPPALLAAI 158
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKY 173
AED T N G+ + +A Y R+EI+ A++ + + + V I ++
Sbjct: 159 DAAEDATSGNDGMTVTLAIGYGGREEIADAVRALLAECAGAGMDCAAAAAAVSPEAIRRH 218
Query: 174 LDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
L +PDPDLIIRT GE RLS F+LWQ +SE F WP F R + A+ + RD
Sbjct: 219 LYLGGMPDPDLIIRTSGEIRLSGFMLWQSVHSELHFCDATWPAFRRIDYLRAIRAFQRRD 278
Query: 234 RRFGG 238
RRFG
Sbjct: 279 RRFGR 283
>gi|215402910|ref|ZP_03415091.1| Short (C15) chain Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis 02_1987]
gi|289744826|ref|ZP_06504204.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis 02_1987]
gi|289685354|gb|EFD52842.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis 02_1987]
Length = 262
Score = 230 bits (588), Expect = 1e-58, Method: Composition-based stats.
Identities = 77/237 (32%), Positives = 118/237 (49%), Gaps = 7/237 (2%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
S P HI ++ DGN RWA + G G+R G E++ E GI T++ S
Sbjct: 28 KSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWCHEAGIDLATVYLLST 87
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
N +R E++ L+++I +++ N+ VR +G+ + ++ L+ A + T
Sbjct: 88 ENLQRDPDELAALIEIITDVVEE--ICAPANHWSVRTVGDLGLIGEEPARRLRGAVESTP 145
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSDVPD 181
++ +A Y R EI A++ + + + + V I++ L TS PD
Sbjct: 146 EVASFHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVDAVTVEGISENLYTSGQPD 205
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PDL+IRT GE+RLS FLLWQ AYSE F +WP F F AL Y+ R RR+G
Sbjct: 206 PDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDFLRALRDYSARHRRYGR 262
>gi|332295555|ref|YP_004437478.1| Undecaprenyl pyrophosphate synthase [Thermodesulfobium narugense
DSM 14796]
gi|332178658|gb|AEE14347.1| Undecaprenyl pyrophosphate synthase [Thermodesulfobium narugense
DSM 14796]
Length = 227
Score = 230 bits (588), Expect = 1e-58, Method: Composition-based stats.
Identities = 84/227 (37%), Positives = 130/227 (57%), Gaps = 7/227 (3%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+HI IIMDGN RW+ AR LP GH +G + E+V E I L+++AFS NW+RP
Sbjct: 5 NHIAIIMDGNARWSKARFLPVFNGHFEGFKKLQEMVNIFTEKNIPYLSVYAFSTENWKRP 64
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
EI + K+ ++K K +K++ + +L +DIL +++ +E +N
Sbjct: 65 KEEIEGIFKIFYDGIEKYIEDWSKKGVKLKFFTLKENLSNDILKLIETSEKVEVNPVKVN 124
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
L +AFNY SR EI I + + + +K L T P+PD++IRTGGE
Sbjct: 125 LGVAFNYGSRKEILYTANKI-------KSLNIEFNEENFSKLLLTYPFPEPDILIRTGGE 177
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
KR+S+F LWQ+AY+E F+ + WPDF+++ + + +++ R RRFGG
Sbjct: 178 KRISNFFLWQIAYTELFFVDKLWPDFTKDDLDNIIAEFHKRQRRFGG 224
>gi|282854468|ref|ZP_06263805.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes J139]
gi|282583921|gb|EFB89301.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes J139]
gi|314980829|gb|EFT24923.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL110PA3]
gi|315090284|gb|EFT62260.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL110PA4]
Length = 273
Score = 230 bits (588), Expect = 1e-58, Method: Composition-based stats.
Identities = 78/245 (31%), Positives = 124/245 (50%), Gaps = 10/245 (4%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAAR--GLPRCAGHRKGIEVFNEIVAAAAEVGIKNL 58
++ + S P H+ ++ DGN RWA G P AG+ G + E VGI +
Sbjct: 32 LLDQLDRSRLPQHVAVLADGNRRWARLNAPGEPLVAGYEAGADRLREFCTWCDAVGIPII 91
Query: 59 TIFAFSINNWRRPVS-EISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
T++ S +N +R + E+ L+K+I+S + + +V+ +G+ L DD+ L
Sbjct: 92 TLWVLSTDNLQRAETGELGPLLKVIESLVDSLAD---NSRWRVQAVGDLDLLPDDMAESL 148
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKY 173
A + + G+++ +A Y R E+ A +++ + D+ + I +
Sbjct: 149 CRAGHTSAGHVGMHINVAVAYGGRHELRDAFRSLLAEEAEKGTSLADLARTLEIDQIEDH 208
Query: 174 LDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
L T PDPDLIIRT GE+RLS FL+WQ A+SEF F WPDF + F AL + R+
Sbjct: 209 LYTRGQPDPDLIIRTSGEQRLSGFLMWQSAHSEFYFCEALWPDFRKVDFLRALRSFTQRE 268
Query: 234 RRFGG 238
RR+G
Sbjct: 269 RRYGR 273
>gi|27375963|ref|NP_767492.1| undecaprenyl pyrophosphate synthase [Bradyrhizobium japonicum USDA
110]
gi|42559966|sp|Q89W41|UPPS1_BRAJA RecName: Full=Undecaprenyl pyrophosphate synthase 1; Short=UPP
synthase 1; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase 1;
AltName: Full=Undecaprenyl diphosphate synthase 1;
Short=UDS 1
gi|27349102|dbj|BAC46117.1| undecaprenyl pyrophosphate synthase [Bradyrhizobium japonicum USDA
110]
Length = 246
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 103/243 (42%), Positives = 138/243 (56%), Gaps = 11/243 (4%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + M S S H+GIIMDGNGRWA RGL R GH G+E IV AA + GI LT+
Sbjct: 1 MQSDMTSRSEKLHVGIIMDGNGRWATRRGLSRLRGHEAGVETIRRIVEAAPKQGIGTLTL 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS +NWRRP +E++ L+ L++ +L SL KN +++ VIG R L D I + A
Sbjct: 61 YAFSTDNWRRPKAEVAALMTLLRFYLANEVQSLVKNGVRLTVIGRRDRLPDGIANAIARA 120
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT--SD 178
E T + L+L IA +YS+RD I + + + ++ L T +
Sbjct: 121 EAATAHGSTLHLRIAVDYSARDAILN--------AAAKAAALTSLTREAFSQ-LVTGEAG 171
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+ D DLIIRT GEKRLSDFLLW+ AY+E F WP+F AL ++ R+RRFGG
Sbjct: 172 LRDVDLIIRTSGEKRLSDFLLWEGAYAELHFTERMWPEFDAGDLAEALAAFHGRERRFGG 231
Query: 239 LSK 241
L
Sbjct: 232 LQA 234
>gi|237750995|ref|ZP_04581475.1| undecaprenyl diphosphate synthase [Helicobacter bilis ATCC 43879]
gi|229373440|gb|EEO23831.1| undecaprenyl diphosphate synthase [Helicobacter bilis ATCC 43879]
Length = 222
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 75/227 (33%), Positives = 120/227 (52%), Gaps = 9/227 (3%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ ++MDGN RWA G+ G+ G +++ E GIK+LT+FAFS NW+RP
Sbjct: 5 RHLAVVMDGNRRWARKNGILEKIGYLHGANTIQKVIEVCIEEGIKHLTLFAFSTENWQRP 64
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
EI L KL+K +L + N+++ R IG L D+ + E+QT+ L
Sbjct: 65 QEEIDYLFKLLKKYLDESLERFLSNDVRFRAIGQLDKLSQDLRKDIANFEEQTKHCKTLC 124
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+ +A +Y ++DEI RA+K + ++ I+ LD S+ D DL++R G
Sbjct: 125 VNVAISYGAKDEIVRAVKRVVDKKL-------EITEENISANLDISE--DVDLLLRVGSA 175
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R+S+FLLWQ AY+E F +P +++ ++ + R+R FG
Sbjct: 176 SRISNFLLWQCAYAEIFFSKTLFPGLTKKECKRIIDDFKQRERTFGK 222
>gi|149192505|ref|ZP_01870688.1| undecaprenyl pyrophosphate synthase [Vibrio shilonii AK1]
gi|148833662|gb|EDL50716.1| undecaprenyl pyrophosphate synthase [Vibrio shilonii AK1]
Length = 219
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 80/211 (37%), Positives = 130/211 (61%)
Query: 32 RCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFY 91
R GH+KG+ + ++ AA++ I+ +T+FAFS NWRRP E+ L++L S L
Sbjct: 1 RVFGHKKGVSAVRKTISTAAKLNIQAVTLFAFSSENWRRPEDEVGLLMELFISVLSSEIN 60
Query: 92 SLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNI 151
L +NN+++ +IG++ +D + + EAE T NTG + IA NY + +I +A K +
Sbjct: 61 KLHQNNLRLCIIGDKSRFNDRLQRKIAEAEKLTENNTGTVINIAANYGGKWDILQATKTL 120
Query: 152 FQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIP 211
+E G + + D+ +I +Y+ SD+PD DL+IRT GE R+S+F+LWQ+AY+E F
Sbjct: 121 AGLVERGELSADDITEDMIGRYVTMSDLPDVDLLIRTSGECRISNFMLWQMAYAEMYFTD 180
Query: 212 EYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
EYWP+F+ + A+ + R+RRFG ++
Sbjct: 181 EYWPEFNEDSLIKAITWFVNRERRFGCTGEQ 211
>gi|145593421|ref|YP_001157718.1| undecaprenyl diphosphate synthase [Salinispora tropica CNB-440]
gi|145302758|gb|ABP53340.1| Undecaprenyl pyrophosphate synthetase [Salinispora tropica CNB-440]
Length = 256
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 79/243 (32%), Positives = 121/243 (49%), Gaps = 8/243 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGL-PRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ A + P H+G++ DGN RWA G GHR G E E++ G+ ++T
Sbjct: 15 LTAKLAGKPVPRHVGVMCDGNRRWAREMGFVDPNDGHRVGAERIKELLRWCDAAGVGHVT 74
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++ S +N RP +++ L+++I+ + ++R++G L LK
Sbjct: 75 LWLLSTDNLTRPAAQLDPLLQIIEDLTSELAEEANP--WRLRMVGALDVLPAQHAAALKA 132
Query: 120 AEDQTRLN-TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYL 174
A ++TR G + IA Y R EI+ ++++ + + D I ++L
Sbjct: 133 AAERTRDRVGGAQVNIAVGYGGRREIADSVRSFLHEHAKAGTSIEQLAETFDVEHITEHL 192
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
T +PDPDLIIRT GE+R+S FLLWQ +SEF F WP+F R F AL Y R R
Sbjct: 193 YTRGLPDPDLIIRTSGEQRMSGFLLWQSVHSEFYFCELNWPEFRRVDFLRALRSYATRQR 252
Query: 235 RFG 237
RFG
Sbjct: 253 RFG 255
>gi|169860208|ref|XP_001836739.1| undecaprenyl pyrophosphate synthetase [Coprinopsis cinerea
okayama7#130]
gi|116502061|gb|EAU84956.1| undecaprenyl pyrophosphate synthetase [Coprinopsis cinerea
okayama7#130]
Length = 261
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 70/238 (29%), Positives = 116/238 (48%), Gaps = 9/238 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + + P H+ +MDGN R+A GH +G ++ +G+ +T+
Sbjct: 17 IIKILAAGPVPKHVAFVMDGNRRYARKHQKEIPQGHSEGFVALKRVLEVCLYLGVSCVTV 76
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AF+I+N++R E+ L+ L ++ L + L K +++ V+G + L + + +
Sbjct: 77 YAFAIDNFKRSPEEVDALMHLAETKLVELCEHGDLLDKYGVRLNVLGRKELLPEPVRAAI 136
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT- 176
+AED TR N L + Y SRDEI+ A++ Q G V I L T
Sbjct: 137 AKAEDMTRNNKRAILNVCMPYGSRDEITTAVQLSVQKAMEGDCV---VTEDDIESNLMTT 193
Query: 177 -SDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFFHALNQYNLR 232
+ P D++IRT G KRLSDFLLWQ ++ F +WPD++ F L Y +
Sbjct: 194 LGNSPPLDILIRTSGVKRLSDFLLWQCCEDTQIHFTDTFWPDYALTDFIPILLDYQRK 251
>gi|198428531|ref|XP_002120306.1| PREDICTED: similar to dehydrodolichyl diphosphate synthase [Ciona
intestinalis]
Length = 306
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 70/235 (29%), Positives = 128/235 (54%), Gaps = 7/235 (2%)
Query: 1 MVASMMS-SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ +S++ P H+ IMDGN R+A + + R GH +G + E++ E+G++ +T
Sbjct: 15 LYSSILKVGPIPKHLAFIMDGNRRYAVKKHVERIEGHSQGFDKLAEVLQWCQELGVEEVT 74
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCV 116
++AFS N++R E+ L++L ++ ++ L++ +++ V+G L D + +
Sbjct: 75 VYAFSAENFKRSKEEVDSLMELARTKFERILKEKDKLEELGVRLCVVGELDMLPDSLQTL 134
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT 176
K+ T+ N L + Y+SR E+++A+++I ++ G + D+ L+ K L
Sbjct: 135 AKQLITTTKNNYKCKLNVCAAYTSRLEMTQAVRDIKWGVDEGLIYVSDISERLMDKTL-- 192
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
+P DL+IRT GE RLSDFLLWQ + S F+ WP+ + F+ A+ Y
Sbjct: 193 -QIPKVDLLIRTSGEVRLSDFLLWQSSLSYLSFLRHLWPEMTIWDFYGAILLYQQ 246
>gi|312880147|ref|ZP_07739947.1| Undecaprenyl pyrophosphate synthetase [Aminomonas paucivorans DSM
12260]
gi|310783438|gb|EFQ23836.1| Undecaprenyl pyrophosphate synthetase [Aminomonas paucivorans DSM
12260]
Length = 239
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 92/235 (39%), Positives = 134/235 (57%), Gaps = 5/235 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ P H+G++MDGNGRWA RGLPR GH G++ +V AA + GI+ L+++A
Sbjct: 5 EELRLERLPAHVGMVMDGNGRWAKERGLPRVMGHHAGVKAVERVVQAAKDWGIRTLSLYA 64
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW+RP E+ L+ L + +L+ L++ ++R G L +DI +L+E+E+
Sbjct: 65 FSTENWKRPQGEVLGLMGLFRYYLRSKLDRLREERARLRFAGRLEDLPEDIREILRESEE 124
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
TR N + + I NY R E+ A+ I VD ++L D+PDP
Sbjct: 125 ATRDNDAITVVICINYGGRQEVLDAVNRILAQ-----GTPGPVDDQAFRRHLYLPDLPDP 179
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IR+ GE R+S+F L+Q AYSE+ F YWPDF E F AL Y R+RR+G
Sbjct: 180 DLLIRSSGELRMSNFWLYQGAYSEYYFSSLYWPDFGPEEFEKALRDYAGRERRYG 234
>gi|326405216|ref|YP_004285298.1| undecaprenyl pyrophosphate synthetase [Acidiphilium multivorum
AIU301]
gi|325052078|dbj|BAJ82416.1| undecaprenyl pyrophosphate synthetase [Acidiphilium multivorum
AIU301]
Length = 283
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 80/245 (32%), Positives = 127/245 (51%), Gaps = 7/245 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ + + P H+GII+DGN R A GL +R G +EI+A +AE+GI +T
Sbjct: 39 LAREVAAGPLPHHVGIILDGNRRHARLAGLSDPGEIYRLGAAKLDEILAWSAELGIPMIT 98
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVL 117
++ FS N RP +E+ ++ +++ ++ ++ +++ IG R L +L +
Sbjct: 99 LWVFSPANLGRPEAEVGGILGAVEAKMRALVADPHIRSRGVRLAAIGRRDILPPALLAAI 158
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKY 173
AED T N G+ + +A Y R+EI+ A++ + + + V I ++
Sbjct: 159 DAAEDATSGNDGMTVTLAIGYGGREEIADAVRALLAECAGAGMDCAAAAAAVSPEAIRRH 218
Query: 174 LDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
L +PDPDLIIRT GE RLS F+LWQ +SE F WP F R + A+ + RD
Sbjct: 219 LYLGGMPDPDLIIRTSGEIRLSGFMLWQSVHSELHFCDATWPAFRRIDYLRAIRAFQRRD 278
Query: 234 RRFGG 238
RRFG
Sbjct: 279 RRFGR 283
>gi|282164487|ref|YP_003356872.1| undecaprenyl pyrophosphate synthetase [Methanocella paludicola
SANAE]
gi|282156801|dbj|BAI61889.1| undecaprenyl pyrophosphate synthetase [Methanocella paludicola
SANAE]
Length = 325
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 70/240 (29%), Positives = 119/240 (49%), Gaps = 6/240 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ ++ S P H+ II DGN R+A G GH G + +++ E+GI+ LT+
Sbjct: 29 LKRDVLRHSIPQHVAIIQDGNRRYAKRLGKSVEQGHIYGADTTEKVLDWCGELGIRQLTL 88
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLK--KGFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFS N++RP E L L K F + + ++ +++R +G+ L D+ +
Sbjct: 89 YAFSTENFKRPEQEKKALFDLFKHFARQARESKRTHESKLRIRSVGDISMLPQDVKDEIA 148
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
E T L +A Y R EI + + ++++SGS+ ++ ++ KYL
Sbjct: 149 LTEAATATYDKFYLNVAVAYGGRQEIVDGARKMAKEVKSGSLEPENITEEMVDKYLYFGS 208
Query: 179 V--PDPDLIIRTGGEKRLSDFLLWQVAYSEF--VFIPEYWPDFSRELFFHALNQYNLRDR 234
DLIIRTGG++R S+FL WQ + +E +WP+F + F A+ Y R++
Sbjct: 209 ETRSQVDLIIRTGGDERTSNFLPWQASGNECAIYIAAPFWPEFRKIDFIRAVRAYQSREK 268
>gi|314922872|gb|EFS86703.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL001PA1]
gi|314966302|gb|EFT10401.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL082PA2]
gi|315093467|gb|EFT65443.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL060PA1]
gi|315103023|gb|EFT74999.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL050PA2]
gi|327327083|gb|EGE68864.1| undecaprenyl diphosphate synthase [Propionibacterium acnes
HL103PA1]
Length = 273
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 78/245 (31%), Positives = 124/245 (50%), Gaps = 10/245 (4%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAAR--GLPRCAGHRKGIEVFNEIVAAAAEVGIKNL 58
++ + S P H+ ++ DGN RWA G P AG+ G + E VGI +
Sbjct: 32 LLDQLDRSRLPQHVAVLADGNRRWARLNAPGEPLVAGYEAGADRLREFCTWCDAVGIPII 91
Query: 59 TIFAFSINNWRRPVS-EISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
T++ S +N +R + E+ L+K+I+S + + +V+ +G+ L DD+ L
Sbjct: 92 TLWVLSTDNLQRAETGELGPLLKVIESLVDSLAD---NSRWRVQAVGDLDLLPDDMAESL 148
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKY 173
A + + G+++ +A Y R E+ A +++ + D+ + I +
Sbjct: 149 CRAGRTSAGHVGMHINVAVAYGGRHELRDAFRSLLAEEAEKGTSLADLARTLEIDQIEDH 208
Query: 174 LDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
L T PDPDLIIRT GE+RLS FL+WQ A+SEF F WPDF + F AL + R+
Sbjct: 209 LYTRGQPDPDLIIRTSGEQRLSGFLMWQSAHSEFYFCEALWPDFRKVDFLRALRSFTQRE 268
Query: 234 RRFGG 238
RR+G
Sbjct: 269 RRYGR 273
>gi|195565661|ref|XP_002106417.1| GD16139 [Drosophila simulans]
gi|194203793|gb|EDX17369.1| GD16139 [Drosophila simulans]
Length = 291
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 75/230 (32%), Positives = 117/230 (50%), Gaps = 14/230 (6%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
P H+ +MDGN R+A ++ + + GH +G E + + +VG++ +T FAFSI N
Sbjct: 24 GHIPHHVAFVMDGNRRFARSQQIDKIEGHSRGFEKLADCLRWCLDVGVREVTTFAFSIEN 83
Query: 68 WRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
++R E+ L L + + L ++ I++RVIGN L D+ ++ A T
Sbjct: 84 FKRSNEEVEGLFNLAREKFARLLEETARLDEHGIRIRVIGNIELLPLDLQKLVASAMLST 143
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N L L +AF Y+SRDEI+ + + D+ L+ + L T P PDL
Sbjct: 144 ERNDKLFLNVAFAYTSRDEIT----------QRQDLAGEDISERLLEECLYTRHSPPPDL 193
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
+ RT GE RLSDF++WQ++ S F WP + F ++ Y RDR
Sbjct: 194 VFRTSGETRLSDFMMWQLSTSVLYFSNVLWPQITFWHFLASILAYQ-RDR 242
>gi|313232664|emb|CBY19334.1| unnamed protein product [Oikopleura dioica]
Length = 281
Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats.
Identities = 74/234 (31%), Positives = 118/234 (50%), Gaps = 7/234 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + P H+ IMDGN R+A G GH++G E+++ + I +T+
Sbjct: 17 LTWILRAGEIPHHVAFIMDGNRRFARRTGDAPIHGHKQGFSKLAEVLSWCEMLSIPEVTV 76
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFS +N++RP +E+ L+ L + + LK+ +++R+IG L D+
Sbjct: 77 YAFSADNFKRPQAEVDGLMTLAREKFLQLLSEQAKLKEKGVRIRMIGEIDLLPADVRQPA 136
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
E E +TR N L I Y+SR E A K + E+ + +D L++K + S
Sbjct: 137 AELEQKTRNNNSYTLNICIAYTSRLECVNAAKKLLHAFETSKGLA--IDEQLVSKSMYLS 194
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
P L+IRT GE RLSDFLL+Q ++ F+ +WPDFS F L +Y
Sbjct: 195 --SPPQLLIRTSGEARLSDFLLFQCQKAQICFVAPFWPDFSLYDFLGCLLKYQK 246
>gi|255718933|ref|XP_002555747.1| KLTH0G16390p [Lachancea thermotolerans]
gi|238937131|emb|CAR25310.1| KLTH0G16390p [Lachancea thermotolerans]
Length = 284
Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats.
Identities = 84/229 (36%), Positives = 126/229 (55%), Gaps = 5/229 (2%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S + P H+G+IMDGN RWA + + GH G + + E G+ T+FAFSI
Sbjct: 28 SDNVPQHVGLIMDGNRRWAKLKHVEIKEGHNAGFHSMSRALELCYEAGVSTATVFAFSIE 87
Query: 67 NWRRPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
N++R +E+ L+ L +S +K+ +K IK+ VIG+R L DD+L ++ AE
Sbjct: 88 NFKRSSAEVDSLMNLARSGIKQVVQNGEMAQKFGIKINVIGDRKLLPDDVLREVEAAETI 147
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N L I F Y+ RDE+ +IK + Q + G + S D++ + I ++L T P D
Sbjct: 148 TKDNKRAVLNICFPYTGRDELLHSIKEVVQATQLGDLASSDINEAAIDRHLYTGGSPPVD 207
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFV--FIPEYWPDFSRELFFHALNQYN 230
L+IRT G RLSDFL+WQV+ + V F+ WPDF L ++
Sbjct: 208 LLIRTSGVTRLSDFLIWQVSRRDVVIEFLDCLWPDFGSRQMAWILLKFA 256
>gi|254254359|ref|ZP_04947676.1| Di-trans-poly-cis-decaprenylcistransferase [Burkholderia dolosa
AUO158]
gi|124899004|gb|EAY70847.1| Di-trans-poly-cis-decaprenylcistransferase [Burkholderia dolosa
AUO158]
Length = 297
Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats.
Identities = 79/239 (33%), Positives = 127/239 (53%), Gaps = 6/239 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
++ S P H+ +I+DGN RWA G+ G+R G + +++ E GI +T++
Sbjct: 62 SAAASQPVPTHVAVILDGNRRWAERCGVSIADGYRAGGRNVHALLSWCEEAGIPFVTLWP 121
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
S N R +E+ L+ +I + S + ++ VIG+ L ++ AE
Sbjct: 122 LSTENLSRDAAELGGLLAVIADVFDELAASGRS---RLHVIGDLTKLPAATAARIRAAEQ 178
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGS---VCSHDVDSSLIAKYLDTSDV 179
+T GL++ +A YS R ++ AI+ + ++ + + + IA L T+
Sbjct: 179 RTTHAHGLDVTVAVAYSGRLDLLHAIRTLIEEHVAAGTVDRLPAQLSAESIASRLYTAGQ 238
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
P+PDL+IRT GE+RLS+F+LWQ A+SEF F P WPDF R+ F A++ Y R RRFG
Sbjct: 239 PEPDLVIRTSGEQRLSNFMLWQTAFSEFYFSPVCWPDFGRDDFERAIDAYGKRARRFGR 297
>gi|218249817|ref|YP_002374648.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia burgdorferi
ZS7]
gi|218165005|gb|ACK75066.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia burgdorferi
ZS7]
Length = 230
Score = 229 bits (583), Expect = 4e-58, Method: Composition-based stats.
Identities = 90/234 (38%), Positives = 138/234 (58%), Gaps = 4/234 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M SS P H+GIIMDGN RWA +GL G+++G++ EIV + ++GIK L+ + FS
Sbjct: 1 MNKSSLPSHVGIIMDGNRRWALGKGLSFSEGYKEGLKRAKEIVKHSLKIGIKYLSFYVFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+R EI EL+ LI S+L+ F KKN IK+ V G+ SL +++ +K++ +
Sbjct: 61 TENWKRDDCEIEELMFLIASYLRAEFNFYKKNGIKIIVSGDVDSLGEEVKSSIKDSVSFS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ L L +A NY R+EI RA++ S + ++ + + +LD ++PD DL
Sbjct: 121 KNFNNLVLNLAINYGGRNEILRAVRKFV----SNNFDLESLNENTFSNFLDNPELPDLDL 176
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+IRTGG R+S+F LW++AYSE +F WP++ + L + LR R FG
Sbjct: 177 LIRTGGNIRISNFFLWRIAYSELIFSNVLWPEYYENRYSKDLECFQLRRRNFGR 230
>gi|50549041|ref|XP_501991.1| YALI0C18799p [Yarrowia lipolytica]
gi|49647858|emb|CAG82311.1| YALI0C18799p [Yarrowia lipolytica]
Length = 267
Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats.
Identities = 76/243 (31%), Positives = 131/243 (53%), Gaps = 4/243 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P H+ +MDGN R+A R L GH KG E +I+ + G++++T+FAFS
Sbjct: 23 LATGPVPRHVAFVMDGNRRYARERQLETREGHSKGFESLAQILELCYDAGVEDVTVFAFS 82
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R E+ L+++ K L + S ++ I++RV+GNR L D+ + +A+
Sbjct: 83 IENFKRTPREVESLMEIAKERLTQICESGELAEQYGIRIRVLGNRSLLRKDVAELFDKAQ 142
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T+ +T L I F Y+SRD+I+ I+ + +D E G + D+ +A ++ T + P
Sbjct: 143 TMTKGHTRATLNICFPYTSRDDIAHGIRGVVRDAEKGEIEPADITEQTLASHMYTGNSPP 202
Query: 182 PDLIIRTGGEKRLSDFLLWQVA-YSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
D++IRT G R SDF+LW+ + F+ WPDF L +++ R +
Sbjct: 203 LDILIRTSGVCRFSDFMLWESHQGAHIEFVDTLWPDFGVWRMLAILLKWSWRKAYLADQA 262
Query: 241 KKG 243
++G
Sbjct: 263 EQG 265
>gi|268536404|ref|XP_002633337.1| C. briggsae CBR-KLP-12 protein [Caenorhabditis briggsae]
gi|187034478|emb|CAP26295.1| CBR-KLP-12 protein [Caenorhabditis briggsae AF16]
Length = 1874
Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats.
Identities = 76/231 (32%), Positives = 117/231 (50%), Gaps = 5/231 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGL-PRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ S P H+ +MDGN R+A + L GH KG +I+ + GI+ +T++AF
Sbjct: 31 IASGPIPRHVAFVMDGNRRFAKNKNLGSVIKGHEKGFVQLAKILDWCSRFGIREITVYAF 90
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
SI N++R E+ L++L + +K L + I R GNR L + ++ +
Sbjct: 91 SIENFKRSEDEVGGLMRLAEEKFQKLLNDSEKLDEKRICFRFYGNRTLLSARLQKLMSDI 150
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT-SDV 179
E +T G L + Y+SRDEISR+ + I ++ G + D++ S+I LD+
Sbjct: 151 EGRTEKFEGGRLNVCMPYTSRDEISRSFETIRTHVKEGKLNVEDINESMIDACLDSGCGG 210
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
PDL IRT GE RLSDF++WQ A + F WP+F A+ Y
Sbjct: 211 TPPDLFIRTSGEHRLSDFMMWQAADTHIYFDSVLWPEFGYYNLCKAILNYQ 261
>gi|224532182|ref|ZP_03672814.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia valaisiana
VS116]
gi|224511647|gb|EEF82053.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia valaisiana
VS116]
Length = 230
Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats.
Identities = 91/234 (38%), Positives = 136/234 (58%), Gaps = 4/234 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M +S P H+GIIMDGN RWA +GL G+++G++ EIV + +VGIK L+ + FS
Sbjct: 1 MNKNSLPRHVGIIMDGNRRWALGKGLSFLEGYKEGLKRAKEIVKHSLKVGIKYLSFYVFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+R EI +L+ LI S+L+ F KKN IK+ V G+ SL +++ +K++ +
Sbjct: 61 TENWKRNDCEIEKLMFLIASYLRAEFNFYKKNGIKIIVSGDIDSLSEEVKSSIKDSTSFS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ L L +A NY R+EI RAIK S +D + + +LD ++PD DL
Sbjct: 121 KNFNNLILNLAINYGGRNEILRAIKKFV----SSDFDLESLDENTFSNFLDNPELPDLDL 176
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+IRTGG R+S+F LW++AYSE +F WP++ + L + R R FG
Sbjct: 177 LIRTGGNIRISNFFLWRIAYSELIFSNVLWPEYYGNEYSKDLECFQFRIRNFGR 230
>gi|313814867|gb|EFS52581.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL059PA1]
gi|315098905|gb|EFT70881.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL059PA2]
Length = 273
Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats.
Identities = 79/245 (32%), Positives = 124/245 (50%), Gaps = 10/245 (4%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAAR--GLPRCAGHRKGIEVFNEIVAAAAEVGIKNL 58
++ + S P H+ ++ DGN RWA G P AG+ G + E VGI +
Sbjct: 32 LLDQLDRSRLPQHVAVLADGNRRWARLNAPGEPLVAGYEAGADRLREFCTWCDAVGIPII 91
Query: 59 TIFAFSINNWRRPVS-EISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
T++ S +N +R + E+ L+K+IKS + + +V+ +G+ L DD+ L
Sbjct: 92 TLWVLSTDNLQRAETGELGPLLKVIKSLVDSLAD---NSRWRVQAVGDLDLLPDDMAESL 148
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKY 173
A + + G+++ +A Y R E+ A +++ + D+ + I +
Sbjct: 149 CRAGRTSIGHVGMHINVAVAYGGRHELRDAFRSLLAEEAEKGTSLADLARTLEIDQIEDH 208
Query: 174 LDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
L T PDPDLIIRT GE+RLS FL+WQ A+SEF F WPDF + F AL + R+
Sbjct: 209 LYTRGQPDPDLIIRTSGEQRLSGFLMWQSAHSEFYFCEALWPDFRKVDFLRALRSFTQRE 268
Query: 234 RRFGG 238
RR+G
Sbjct: 269 RRYGR 273
>gi|15608226|ref|NP_215602.1| short (C15) chain Z-isoprenyl diphosphate synthase (Z-FPP synthase)
(Z-farnesyl diphosphate synthase) (Z-FPP synthetase)
(Z-farnesyl diphosphate synthetase)
(geranyltranstransferase) (farnesyl pyrophosphate
synthetase) [Mycobacterium tuberculosis H37Rv]
gi|15840523|ref|NP_335560.1| undecaprenyl diphosphate synthase [Mycobacterium tuberculosis
CDC1551]
gi|148660871|ref|YP_001282394.1| undecaprenyl diphosphate synthase [Mycobacterium tuberculosis
H37Ra]
gi|148822295|ref|YP_001287049.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis F11]
gi|218752766|ref|ZP_03531562.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis GM 1503]
gi|253799878|ref|YP_003032879.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis KZN 1435]
gi|254550079|ref|ZP_05140526.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis '98-R604 INH-RIF-EM']
gi|289555131|ref|ZP_06444341.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis KZN 605]
gi|289761224|ref|ZP_06520602.1| short chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis GM 1503]
gi|297633621|ref|ZP_06951401.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis KZN 4207]
gi|297730606|ref|ZP_06959724.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis KZN R506]
gi|306775234|ref|ZP_07413571.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu001]
gi|306781850|ref|ZP_07420187.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu002]
gi|306783791|ref|ZP_07422113.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu003]
gi|306788150|ref|ZP_07426472.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu004]
gi|306792483|ref|ZP_07430785.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu005]
gi|306796879|ref|ZP_07435181.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu006]
gi|306802766|ref|ZP_07439434.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu008]
gi|306806948|ref|ZP_07443616.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu007]
gi|306967150|ref|ZP_07479811.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu009]
gi|306971338|ref|ZP_07483999.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu010]
gi|307079066|ref|ZP_07488236.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu011]
gi|307083629|ref|ZP_07492742.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu012]
gi|313657933|ref|ZP_07814813.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis KZN V2475]
gi|6136589|sp|O53434|ZFPP_MYCTU RecName: Full=Short-chain Z-isoprenyl diphosphate synthase;
AltName: Full=(2Z,6E)-farnesyl diphosphate synthase;
AltName: Full=Z-FPP synthase; Short=Z-FPPS; AltName:
Full=Z-isoprenyl diphosphate synthase
gi|2896723|emb|CAA17202.1| SHORT (C15) CHAIN Z-ISOPRENYL DIPHOSPHATE SYNTHASE (Z-FPP SYNTHASE)
(Z-FARNESYL DIPHOSPHATE SYNTHASE) (Z-FPP SYNTHETASE)
(Z-FARNESYL DIPHOSPHATE SYNTHETASE)
(GERANYLTRANSTRANSFERASE) (FARNESYL PYROPHOSPHATE
SYNTHETASE) [Mycobacterium tuberculosis H37Rv]
gi|13880699|gb|AAK45374.1| undecaprenyl diphosphate synthase [Mycobacterium tuberculosis
CDC1551]
gi|148505023|gb|ABQ72832.1| undecaprenyl diphosphate synthase [Mycobacterium tuberculosis
H37Ra]
gi|148720822|gb|ABR05447.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis F11]
gi|253321381|gb|ACT25984.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis KZN 1435]
gi|289439763|gb|EFD22256.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis KZN 605]
gi|289708730|gb|EFD72746.1| short chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis GM 1503]
gi|308216241|gb|EFO75640.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu001]
gi|308325418|gb|EFP14269.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu002]
gi|308331433|gb|EFP20284.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu003]
gi|308335242|gb|EFP24093.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu004]
gi|308339048|gb|EFP27899.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu005]
gi|308342726|gb|EFP31577.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu006]
gi|308346620|gb|EFP35471.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu007]
gi|308350526|gb|EFP39377.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu008]
gi|308355174|gb|EFP44025.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu009]
gi|308359130|gb|EFP47981.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu010]
gi|308363045|gb|EFP51896.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu011]
gi|308366698|gb|EFP55549.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis SUMu012]
gi|323720456|gb|EGB29543.1| short-chain Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis CDC1551A]
gi|328459623|gb|AEB05046.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis KZN 4207]
Length = 262
Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats.
Identities = 76/237 (32%), Positives = 118/237 (49%), Gaps = 7/237 (2%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
S P HI ++ DGN RWA + G G+R G E++ E GI+ T++ S
Sbjct: 28 KSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWCHEAGIELATVYLLST 87
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
N +R E++ L+++I +++ N+ VR +G+ + ++ L+ A + T
Sbjct: 88 ENLQRDPDELAALIEIITDVVEE--ICAPANHWSVRTVGDLGLIGEEPARRLRGAVESTP 145
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSDVPD 181
++ +A Y R EI A++ + + + + V I++ L TS PD
Sbjct: 146 EVASFHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVDAVTVEGISENLYTSGQPD 205
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PDL+IRT GE+RLS FLLWQ AYSE F +WP F F AL Y+ R R +G
Sbjct: 206 PDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDFLRALRDYSARHRSYGR 262
>gi|50842050|ref|YP_055277.1| undecaprenyl pyrophosphate synthase [Propionibacterium acnes
KPA171202]
gi|289425871|ref|ZP_06427625.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes SK187]
gi|289426694|ref|ZP_06428422.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes J165]
gi|295130133|ref|YP_003580796.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes SK137]
gi|50839652|gb|AAT82319.1| undecaprenyl pyrophosphate synthase [Propionibacterium acnes
KPA171202]
gi|289153814|gb|EFD02521.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes SK187]
gi|289160020|gb|EFD08196.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes J165]
gi|291375726|gb|ADD99580.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes SK137]
gi|313764006|gb|EFS35370.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL013PA1]
gi|313771463|gb|EFS37429.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL074PA1]
gi|313791663|gb|EFS39781.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL110PA1]
gi|313802251|gb|EFS43477.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL110PA2]
gi|313808123|gb|EFS46597.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL087PA2]
gi|313811410|gb|EFS49124.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL083PA1]
gi|313812593|gb|EFS50307.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL025PA1]
gi|313818890|gb|EFS56604.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL046PA2]
gi|313820717|gb|EFS58431.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL036PA1]
gi|313822516|gb|EFS60230.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL036PA2]
gi|313825688|gb|EFS63402.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL063PA1]
gi|313828030|gb|EFS65744.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL063PA2]
gi|313830835|gb|EFS68549.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL007PA1]
gi|313839019|gb|EFS76733.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL086PA1]
gi|314915038|gb|EFS78869.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL005PA4]
gi|314918631|gb|EFS82462.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL050PA1]
gi|314920439|gb|EFS84270.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL050PA3]
gi|314925632|gb|EFS89463.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL036PA3]
gi|314932113|gb|EFS95944.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL067PA1]
gi|314954621|gb|EFS99027.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL027PA1]
gi|314958580|gb|EFT02682.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL002PA1]
gi|314959816|gb|EFT03918.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL002PA2]
gi|314962389|gb|EFT06490.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL082PA1]
gi|314968340|gb|EFT12439.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL037PA1]
gi|314973723|gb|EFT17819.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL053PA1]
gi|314976370|gb|EFT20465.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL045PA1]
gi|314979199|gb|EFT23293.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL072PA2]
gi|314983347|gb|EFT27439.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL005PA1]
gi|314986754|gb|EFT30846.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL005PA2]
gi|314989495|gb|EFT33586.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL005PA3]
gi|315077476|gb|EFT49536.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL053PA2]
gi|315080219|gb|EFT52195.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL078PA1]
gi|315084101|gb|EFT56077.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL027PA2]
gi|315085303|gb|EFT57279.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL002PA3]
gi|315089082|gb|EFT61058.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL072PA1]
gi|315096498|gb|EFT68474.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL038PA1]
gi|315100855|gb|EFT72831.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL046PA1]
gi|315107207|gb|EFT79183.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL030PA1]
gi|315108073|gb|EFT80049.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL030PA2]
gi|327326748|gb|EGE68531.1| undecaprenyl diphosphate synthase [Propionibacterium acnes
HL096PA2]
gi|327330555|gb|EGE72302.1| undecaprenyl diphosphate synthase [Propionibacterium acnes
HL096PA3]
gi|327331074|gb|EGE72814.1| undecaprenyl diphosphate synthase [Propionibacterium acnes
HL097PA1]
gi|327443051|gb|EGE89705.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL043PA1]
gi|327445174|gb|EGE91828.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL043PA2]
gi|327446892|gb|EGE93546.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL013PA2]
gi|327450155|gb|EGE96809.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL087PA3]
gi|327455118|gb|EGF01773.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL092PA1]
gi|327455288|gb|EGF01943.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL083PA2]
gi|328752568|gb|EGF66184.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL020PA1]
gi|328752821|gb|EGF66437.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL087PA1]
gi|328759256|gb|EGF72872.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL025PA2]
gi|328760257|gb|EGF73830.1| undecaprenyl diphosphate synthase [Propionibacterium acnes
HL099PA1]
gi|332674973|gb|AEE71789.1| undecaprenyl pyrophosphate synthase [Propionibacterium acnes 266]
Length = 273
Score = 228 bits (581), Expect = 6e-58, Method: Composition-based stats.
Identities = 78/245 (31%), Positives = 124/245 (50%), Gaps = 10/245 (4%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAAR--GLPRCAGHRKGIEVFNEIVAAAAEVGIKNL 58
++ + S P H+ ++ DGN RWA G P AG+ G + E VGI +
Sbjct: 32 LLDQLDRSRLPQHVAVLADGNRRWARLNAPGEPLVAGYEAGADRLREFCTWCDAVGIPII 91
Query: 59 TIFAFSINNWRRPVS-EISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
T++ S +N +R + E+ L+K+I+S + + +V+ +G+ L DD+ L
Sbjct: 92 TLWVLSTDNLQRAETGELGPLLKVIESLVDSLAD---NSRWRVQAVGDLDLLPDDMAESL 148
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKY 173
A + + G+++ +A Y R E+ A +++ + D+ + I +
Sbjct: 149 CRAGRTSIGHVGMHINVAVAYGGRHELRDAFRSLLAEEAEKGTSLADLARTLEIDQIEDH 208
Query: 174 LDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
L T PDPDLIIRT GE+RLS FL+WQ A+SEF F WPDF + F AL + R+
Sbjct: 209 LYTRGQPDPDLIIRTSGEQRLSGFLMWQSAHSEFYFCEALWPDFRKVDFLRALRSFTQRE 268
Query: 234 RRFGG 238
RR+G
Sbjct: 269 RRYGR 273
>gi|330796809|ref|XP_003286457.1| hypothetical protein DICPUDRAFT_150424 [Dictyostelium purpureum]
gi|325083580|gb|EGC37029.1| hypothetical protein DICPUDRAFT_150424 [Dictyostelium purpureum]
Length = 572
Score = 228 bits (581), Expect = 6e-58, Method: Composition-based stats.
Identities = 70/232 (30%), Positives = 121/232 (52%), Gaps = 5/232 (2%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+++ + P HIG+IMDGN R+A L GH+KG E+ + +G+K ++++
Sbjct: 286 CSTLKNGPIPKHIGVIMDGNRRFAERNHLQTKDGHKKGFNTMLELCQWSLALGVKIISVY 345
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCVLK 118
AFSI N++R SE+ +L+ L ++ + L++ +++RV+G+ + + +L
Sbjct: 346 AFSIENFKRSKSEVEDLMDLANKKFEEMVSKSHKLQQLGVRIRVVGDFKHIPEKTQSILA 405
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
A T N L I +Y++ EI ++K + + + S D+D L L +
Sbjct: 406 RAVKATENNNKALLNICLSYTAHAEILHSMKTLSNGVSDNLIESEDIDQDLFENCLYIKE 465
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
D D++IRT GE RLSDF+LWQ ++ + WPDFS F + + Y
Sbjct: 466 --DLDILIRTSGEYRLSDFMLWQSCFTNLALVGILWPDFSFLHFVYVIFIYQ 515
>gi|313837028|gb|EFS74742.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL037PA2]
gi|314929384|gb|EFS93215.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL044PA1]
gi|314971532|gb|EFT15630.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL037PA3]
gi|328907906|gb|EGG27668.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium sp. P08]
Length = 273
Score = 228 bits (581), Expect = 7e-58, Method: Composition-based stats.
Identities = 79/245 (32%), Positives = 127/245 (51%), Gaps = 10/245 (4%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAAR--GLPRCAGHRKGIEVFNEIVAAAAEVGIKNL 58
++ + S P H+ ++ DGN RWA G P AG+ G + E A VGI +
Sbjct: 32 LLDQLDRSRLPQHVAVLADGNRRWARLNAPGEPLVAGYAAGADRLREFCAWCDAVGIPII 91
Query: 59 TIFAFSINNWRRPVS-EISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
T++ S +N +R + E+ L+K+I+S + + +V+ +G+ L DD+ L
Sbjct: 92 TLWVLSTDNLQRAETGELGPLLKVIESLVDSL---AANSRWRVQAVGDLDLLPDDMAESL 148
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKY 173
A + + G+++ +A Y R E+ A++++ + ++ +L I +
Sbjct: 149 CRAGRTSAKHVGMHINVAVAYGGRHELRDAVRSLLAEEAEKGTRLAELAQTLEIDQIEDH 208
Query: 174 LDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
L T PDPDLIIRT GE+RLS FL+WQ A+SEF F WPDF + F AL + R+
Sbjct: 209 LYTRGQPDPDLIIRTSGEQRLSGFLMWQSAHSEFYFCEALWPDFRKVDFLRALRSFTQRE 268
Query: 234 RRFGG 238
RR+G
Sbjct: 269 RRYGR 273
>gi|42569260|ref|NP_179921.2| dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase,
putative [Arabidopsis thaliana]
gi|330252357|gb|AEC07451.1| cis-prenyltransferase, dehydrodolichyl diphosphate synthase
[Arabidopsis thaliana]
Length = 253
Score = 227 bits (580), Expect = 7e-58, Method: Composition-based stats.
Identities = 84/237 (35%), Positives = 122/237 (51%), Gaps = 17/237 (7%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ P H+ I+DGN RWA GL GH G + EI E+GI ++ FA
Sbjct: 29 EELQRELMPRHVSFILDGNRRWAKRDGLTTAQGHEAGTKRIIEIAEVCFELGIHTVSAFA 88
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
FS NW R E+ L+ L +LK ++ ++V VIGN+ + + +L + E E+
Sbjct: 89 FSTENWGRDKFEVKCLMSLFNHYLKSNIQYFQRKEVRVSVIGNKTKIPESLLKEIHEIEE 148
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT--SDVP 180
T+ IS + ++ + E G + DVD +LI + L T SD P
Sbjct: 149 ATKATR---------------ISISSWHLVKKSEKGLIREEDVDEALIERELLTNCSDFP 193
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDL+IRT GE+R+S+F LWQ+AY+E + P WPDF ++ AL Y R+RRFG
Sbjct: 194 SPDLMIRTSGEQRISNFFLWQLAYTELFYSPVLWPDFDKDKLLEALASYQGRERRFG 250
>gi|219850791|ref|YP_002465223.1| undecaprenyl diphosphate synthase [Methanosphaerula palustris
E1-9c]
gi|219545050|gb|ACL15500.1| undecaprenyl diphosphate synthase [Methanosphaerula palustris
E1-9c]
Length = 256
Score = 227 bits (580), Expect = 8e-58, Method: Composition-based stats.
Identities = 72/235 (30%), Positives = 124/235 (52%), Gaps = 5/235 (2%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P HI II DGN R+A G+ GHR G ++ +++ A ++G++++T+++F
Sbjct: 16 RLQCRNMPRHIAIIQDGNRRFARKIGVDTAVGHRAGADITEQMLEWAGDLGVQHITLYSF 75
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFY--SLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
S N+ R SE+ EL L + + + +I+V+++G+R L D+L +++AE
Sbjct: 76 STENFHRDASEVQELFDLFREKFLSMVKNERVHRRHIRVQMVGDRTLLPSDLLAAIEQAE 135
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD-VP 180
T L IA Y R+EI +A K I +++ G++ + +++ +L + +P
Sbjct: 136 ASTAGYHDFFLNIAIAYGGRNEIVQAAKRILAEVKDGTLAPEAITPAMVENHLYEGNPLP 195
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEF--VFIPEYWPDFSRELFFHALNQYNLRD 233
DLIIRTG E R S+FL W +E F YWP F + A+ Y R+
Sbjct: 196 PVDLIIRTGNEYRTSNFLPWLANGNECAVYFCAPYWPLFRKIDLLRAIRVYQQRN 250
>gi|111114942|ref|YP_709560.1| undecaprenyl diphosphate synthase [Borrelia afzelii PKo]
gi|216264096|ref|ZP_03436090.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia afzelii ACA-1]
gi|110890216|gb|ABH01384.1| undecaprenyl diphosphate synthase [Borrelia afzelii PKo]
gi|215980140|gb|EEC20962.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia afzelii ACA-1]
Length = 230
Score = 227 bits (580), Expect = 8e-58, Method: Composition-based stats.
Identities = 91/234 (38%), Positives = 138/234 (58%), Gaps = 4/234 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M SS P H+GIIMDGN RWA +GL G+++G++ EIV + ++GIK L+ + FS
Sbjct: 1 MNKSSLPSHVGIIMDGNRRWALGKGLSFSEGYKEGLKRAKEIVKHSLKIGIKYLSFYVFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+R EI EL+ LI S+L+ F KKN IK+ V G+ SL +++ +K++ +
Sbjct: 61 TENWKRDDCEIEELMFLIASYLRAEFNFYKKNGIKIIVSGDVDSLGEEVKSSIKDSVSFS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ L L +A NY R+EI RA++ S + +D + + +LD ++PD DL
Sbjct: 121 KNFNNLVLNLAINYGGRNEILRAVRKFV----SNNFDLKSLDENTFSNFLDNPELPDLDL 176
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+IRTGG R+S+F LW++AYSE +F WP++ + L + LR R FG
Sbjct: 177 LIRTGGNIRISNFFLWRIAYSELIFSNVLWPEYYENRYSKDLECFQLRRRNFGR 230
>gi|307595062|ref|YP_003901379.1| undecaprenyl diphosphate synthase [Vulcanisaeta distributa DSM
14429]
gi|307550263|gb|ADN50328.1| undecaprenyl diphosphate synthase [Vulcanisaeta distributa DSM
14429]
Length = 238
Score = 227 bits (580), Expect = 9e-58, Method: Composition-based stats.
Identities = 90/238 (37%), Positives = 133/238 (55%), Gaps = 5/238 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M + P HIG+I DGN RWA GLP +R G + E + + + GIK +T++ S
Sbjct: 1 MQGALPIHIGVIPDGNRRWARKVGLPITEAYRIGSDKVEEFLDWSLDFGIKIVTVYVLST 60
Query: 66 NNW-RRPVSEISELVKLIKSFL--KKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
N+ RR E+ L +L+K L + + +N ++VRVIG L +D+ + E+
Sbjct: 61 ENFLRRSKLELDLLYRLLKEKLIKVRKDERIHRNRVRVRVIGRTWLLPEDVRREIALTEE 120
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD--VP 180
T + L +A Y R EI AIK I D SG + D++ + +YL D P
Sbjct: 121 ATANYSDHYLNLAVVYGGRQEIIDAIKKILVDYNSGKLNISDLNEDTLFRYLYIGDEPYP 180
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+PDLIIRTGGE R+S+FLL++ AYSE + +YWP+ ++E AL+ Y+ R+RRFG
Sbjct: 181 EPDLIIRTGGEHRISNFLLYETAYSELYILNKYWPEITKEDLKQALDDYSRRERRFGK 238
>gi|300710596|ref|YP_003736410.1| undecaprenyl pyrophosphate synthase [Halalkalicoccus jeotgali B3]
gi|299124279|gb|ADJ14618.1| undecaprenyl pyrophosphate synthase [Halalkalicoccus jeotgali B3]
Length = 287
Score = 227 bits (579), Expect = 9e-58, Method: Composition-based stats.
Identities = 70/237 (29%), Positives = 119/237 (50%), Gaps = 6/237 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + P H+ +I DGN R+A +G GHR G + ++ E+GI+ LT+
Sbjct: 6 LLREIDDG--PTHVAVIQDGNRRYARKQGTETSDGHRAGAQTTERVLNWCEELGIEELTL 63
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFS N RP E + L+ L++ + +++R +GN L + + +
Sbjct: 64 YAFSTENLERPPDEREAIYGLLCEKLREFADADRVHDGGVRIRALGNLSLLPERVQEAAR 123
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
AE +TR L IA Y R E+ +++ + +E+ + ++D+ I + L +
Sbjct: 124 YAERRTREYDTFVLNIALAYGGRAELLGVARDVARAVETSDLRPREIDADEIDRRLYDDE 183
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSE--FVFIPEYWPDFSRELFFHALNQYNLRD 233
+ D DLIIRTGG++R S+FL W +E F YWP+FS+ F A+ Y R+
Sbjct: 184 LRDVDLIIRTGGDERTSNFLPWHANGNEAAVFFCAPYWPEFSKVDFLRAVRTYQHRE 240
>gi|226228733|ref|YP_002762839.1| undecaprenyl pyrophosphate synthetase [Gemmatimonas aurantiaca
T-27]
gi|226091924|dbj|BAH40369.1| undecaprenyl pyrophosphate synthetase [Gemmatimonas aurantiaca
T-27]
Length = 271
Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats.
Identities = 86/234 (36%), Positives = 129/234 (55%), Gaps = 11/234 (4%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P H+ IIMDGNGRWA ARG PR GH +G EIV+ A +GI LT++AFS +NW
Sbjct: 21 NLPAHVAIIMDGNGRWATARGRPRWMGHVRGAHTVKEIVSHCARLGIGQLTLYAFSSDNW 80
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP E+ L L S L++ SL K+ I++ +IG R L ++ + AE +T
Sbjct: 81 KRPREEVGFLFDLFASHLERQLTSLIKHGIRLSIIGRRDRLPSALVEAIAVAEARTAAGR 140
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
++L +A +YSSR + +A+ V + I +P DL++RT
Sbjct: 141 RMHLRVAVDYSSRASLQKALSVAA---AVTPVDEVALTGETI--------LPPVDLLVRT 189
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
GGE+RLSDFLLW+ AY+E F+ +PD + ++ R+RR+G + +
Sbjct: 190 GGERRLSDFLLWECAYAELAFLDVNFPDLAMSELDAVFTDFSRRERRYGAVPAQ 243
>gi|66802670|ref|XP_635207.1| hypothetical protein DDB_G0291436 [Dictyostelium discoideum AX4]
gi|60463517|gb|EAL61702.1| hypothetical protein DDB_G0291436 [Dictyostelium discoideum AX4]
Length = 420
Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats.
Identities = 70/232 (30%), Positives = 124/232 (53%), Gaps = 6/232 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+++ + P HIG+IMDGN R+A L GH+KG ++ +G+K ++++A
Sbjct: 116 STLKNGPIPKHIGVIMDGNRRFAERNHLETKEGHKKGFNTMLDLCQWGLTLGVKIISVYA 175
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
FSI N++R SE+ +L++L + + + L++ +++RV+G+ + + +L +
Sbjct: 176 FSIENFKRSKSEVQDLMELANNKFTEMISKSHKLQQLGVRIRVVGDHSHIPEKTKSILAK 235
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD-IESGSVCSHDVDSSLIAKYLDTSD 178
A T NT L I +Y+S +EI ++K + + + + D+D L L +
Sbjct: 236 AVKSTENNTKALLNICLSYTSHEEILHSMKILSKGVNQEKKIEIEDIDQDLFENCLYIKE 295
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
D D++IRT GE RLSDF+LWQ ++ + WPDFS F + + Y
Sbjct: 296 --DLDILIRTSGEYRLSDFMLWQSCFTNLALVNTLWPDFSFFHFIYIIFLYQ 345
>gi|256079779|ref|XP_002576162.1| dehydrodolichyl diphosphate synthase (dedol-pp synthase)
[Schistosoma mansoni]
gi|238661424|emb|CAZ32397.1| dehydrodolichyl diphosphate synthase (dedol-pp synthase), putative
[Schistosoma mansoni]
Length = 311
Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats.
Identities = 77/234 (32%), Positives = 127/234 (54%), Gaps = 5/234 (2%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ ++ P H+ IMDGN R+A + L + GH G +E + ++GI+ ++IF
Sbjct: 18 LHAIKYGPIPKHVAFIMDGNRRFADGKMLKKSDGHLHGFTKLSETLQWCRDIGIEEVSIF 77
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCVLK 118
FSI+N+ R E+S L+ L + L++ LK ++I +RVIGN L + +
Sbjct: 78 TFSIDNFNRSHEEVSFLMNLAEEKLQELLDNKDELKADDICIRVIGNLALLPAKVQSLAA 137
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
+ TR ++ L I Y+SR++I+ A++ + ++ G + D+ L++K L T
Sbjct: 138 QLMLVTRNHSKSILNICMAYNSRNDITNAMEIVRLGVKEGKIIPSDITRELLSKCLYTRL 197
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFV--FIPEYWPDFSRELFFHALNQYN 230
DL+IRT GE RLSDFL WQV+ ++ + FI YWP+FS F ++ Y
Sbjct: 198 SKPLDLLIRTSGEIRLSDFLTWQVSENDTIYKFINNYWPEFSWWDFLSSIIHYQ 251
>gi|111222976|ref|YP_713770.1| undecaprenyl pyrophosphate synthetase [Frankia alni ACN14a]
gi|111150508|emb|CAJ62207.1| Undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans-poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS) [Frankia alni
ACN14a]
Length = 258
Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats.
Identities = 84/245 (34%), Positives = 128/245 (52%), Gaps = 8/245 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLP-RCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ +M+ P H+G++MDGN RWA GL GHR G E ++++ VGI+++T
Sbjct: 15 LRRQVMAGPLPAHVGLVMDGNRRWAREMGLANPSLGHRYGAEHAEDVLSWCEAVGIRHVT 74
Query: 60 IFAFSINNWRRP-VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+F S N +R +E++ L+++I+ + +V + G +L D VLK
Sbjct: 75 VFVCSTENLQRRGDAEVAFLMQVIEQVVSDRLAR-PDARWQVHLAGMLDALPDSTARVLK 133
Query: 119 EAEDQTRL-NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKY 173
+A + TR TG ++ +A Y R E+ A++ + D + IA++
Sbjct: 134 DAVETTRTVTTGFHVTLAVGYGGRQEVIEALREHLYERAEAGDSLADAAASLRMDDIARH 193
Query: 174 LDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
L T+ PDPDL+IRT GE+R+S+FLLWQ AYSE F YWP F F AL + R
Sbjct: 194 LYTAGQPDPDLVIRTSGEQRMSNFLLWQSAYSELYFCEAYWPAFREIDFLRALRSFAARG 253
Query: 234 RRFGG 238
RR G
Sbjct: 254 RRHGA 258
>gi|302692104|ref|XP_003035731.1| hypothetical protein SCHCODRAFT_81158 [Schizophyllum commune H4-8]
gi|300109427|gb|EFJ00829.1| hypothetical protein SCHCODRAFT_81158 [Schizophyllum commune H4-8]
Length = 261
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 64/238 (26%), Positives = 122/238 (51%), Gaps = 7/238 (2%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + + P H+ +MDGN R+A +R + GH G ++ + ++ ++++
Sbjct: 22 IRILAAGPVPKHVAFVMDGNRRYARSRHMRVQEGHSDGFVALRRLLGICLRLNVRCVSVY 81
Query: 62 AFSINNWRRPVSEISELVKLIKSFLK---KGFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
AF+I+N++RP E+ L+ L ++ L + L++ +++ V+G + L + + ++
Sbjct: 82 AFAIDNFKRPPEEVDALMTLAETKLTELCRHGDLLQQYGVRLNVVGRKDMLPESVREAVR 141
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD--T 176
AE+ TR N L + Y+SRDE++ A++ Q+ VD I K+L T
Sbjct: 142 VAEEMTRNNHRAILNLCMPYASRDEMTHAVQAAAQEKADSVGYP-LVDEKDIEKHLMTST 200
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFFHALNQYNLRD 233
+ P D+++RT G +RLSD++LWQ ++ F YWP+F F + Y +
Sbjct: 201 AGSPPLDILVRTSGVQRLSDYMLWQSCEKAQLHFSTTYWPEFGLSDFLPIILDYQRKQ 258
>gi|71083607|ref|YP_266326.1| putative undecaprenyl diphosphate synthase [Candidatus Pelagibacter
ubique HTCC1062]
gi|71062720|gb|AAZ21723.1| Putative undecaprenyl diphosphate synthase [Candidatus Pelagibacter
ubique HTCC1062]
Length = 225
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 83/229 (36%), Positives = 126/229 (55%), Gaps = 7/229 (3%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+P H+ IIMDGNGRW R AGHR G+ + I+ IK LT++ FS NW
Sbjct: 2 NPIKHVAIIMDGNGRWGVKHKQSRNAGHRAGLNTVDLIINHCINHKIKFLTLYTFSSENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP +EI L KL+++FL+K + + +IK++ IG L + ++K +E +T
Sbjct: 62 KRPKNEIVFLFKLLENFLQKKISKIIEKDIKLKFIGELNKLPTKLQKLIKLSEKKTFNKK 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
L + IA NY S+ E+ +K I + + + I L T +P+PD++IRT
Sbjct: 122 TLQVNIALNYGSKIELINTVKKIKRKKITI-------NEKNIDNNLYTKHLPNPDILIRT 174
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
G RLS+FLLWQ++Y+E F + WPDF + F +N++ R FG
Sbjct: 175 GNTNRLSNFLLWQLSYTEIFFEKKLWPDFKGKDFDKIMNKFKNIKRNFG 223
>gi|240140880|ref|YP_002965360.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase)
[Methylobacterium extorquens AM1]
gi|254563390|ref|YP_003070485.1| undecaprenyl pyrophosphate synthetase [Methylobacterium extorquens
DM4]
gi|240010857|gb|ACS42083.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase)
[Methylobacterium extorquens AM1]
gi|254270668|emb|CAX26672.1| undecaprenyl pyrophosphate synthetase (di-trans,
poly-cis-decaprenylcistransferase) [Methylobacterium
extorquens DM4]
Length = 220
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 95/223 (42%), Positives = 129/223 (57%), Gaps = 11/223 (4%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA+ARGLPR AGHR G++ + AA +GI LT++AFS +NWRRP E+
Sbjct: 1 MDGNGRWASARGLPRGAGHRAGVKTIQRVAEAAPALGIGTLTLYAFSSDNWRRPAEEVGG 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L++++L+ L ++ ++ VIG R L I ++ AE T L+L IA +
Sbjct: 61 LMRLLRAYLRGETDRLARSGTRLTVIGRRDRLPPGIPEAIERAEAATASGDRLHLRIAVD 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
YSSRD I A + + S S + + D DL+IRTGGEKRLSDF
Sbjct: 121 YSSRDAILAAAARLGPEGLSREGLSEALGAD-----------GDVDLLIRTGGEKRLSDF 169
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LLW+ AY+E F WPDF A+ + RDRRFGGL+
Sbjct: 170 LLWEAAYAELHFTDRMWPDFGATDLAAAVADFTARDRRFGGLN 212
>gi|45644744|gb|AAS73132.1| predicted undecaprenyl pyrophosphate synthetase [uncultured marine
gamma proteobacterium EBAC20E09]
Length = 243
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 97/231 (41%), Positives = 136/231 (58%), Gaps = 6/231 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P IGIIMDGNGRWA L GH KG+ V +IV I++LTI+AFS NW R
Sbjct: 12 PKKIGIIMDGNGRWAKLNKLKINKGHEKGVGVVRDIVKECIAQNIESLTIYAFSSENWSR 71
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR-LNTG 129
P SEI+ + KLI + + L + N+ + G+ + D+I + +AED T
Sbjct: 72 PQSEINGIKKLIVKAIHEQVPELMEQNVMLDFFGDISNWGDEISRKINKAEDDTFIEYPS 131
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD--PDLIIR 187
L L +A Y R++I A I + ++S + + D+D +IAK+ S VPD DLIIR
Sbjct: 132 LRLNVALGYGGRNDIVSASIRIAEHLKSDLISTGDIDEDMIAKF---SQVPDDNIDLIIR 188
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
TGG+KRLS+FLL+Q AY+E F+ + WPDF+R+ F + L+ + DRRFG
Sbjct: 189 TGGDKRLSNFLLFQAAYAEIFFVDKLWPDFTRDDFKNCLDAFKKTDRRFGK 239
>gi|88602078|ref|YP_502256.1| undecaprenyl diphosphate synthase [Methanospirillum hungatei JF-1]
gi|88187540|gb|ABD40537.1| Undecaprenyl pyrophosphate synthetase [Methanospirillum hungatei
JF-1]
Length = 258
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 75/230 (32%), Positives = 114/230 (49%), Gaps = 6/230 (2%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI II DGN R+A RG+ +GHR G + E++ A E+GI+++T++ FS N+
Sbjct: 21 IPRHIAIIQDGNRRYAKKRGIATSSGHRAGADRTEEVLEWAQELGIRHITLYTFSTENFT 80
Query: 70 RPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
R E+ L L K L + + K I++++IG++ L DD+ +++AE T
Sbjct: 81 RSDEEVQNLFALFKEKLSRISIDERVHKYGIRIQMIGDKDMLPDDLRGAVEQAEAATAHY 140
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS--DVPDPDLI 185
L +A Y R+E+ R I D+ + D+ L + L + +P DLI
Sbjct: 141 DNFYLNMALAYGGRNEMLRTTAKILDDVRKKKIKREDITPELFEENLYGNSVSLPPVDLI 200
Query: 186 IRTGGEKRLSDFLLWQVAYSE--FVFIPEYWPDFSRELFFHALNQYNLRD 233
IRTG E R S+FL W E F YWP F + A+ Y+ R
Sbjct: 201 IRTGNECRTSNFLPWLANGHESAVYFCAPYWPMFRKLDMLRAIRVYSERQ 250
>gi|215410698|ref|ZP_03419506.1| Short (C15) chain Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis 94_M4241A]
gi|298524583|ref|ZP_07011992.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis 94_M4241A]
gi|298494377|gb|EFI29671.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis 94_M4241A]
Length = 262
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 76/235 (32%), Positives = 118/235 (50%), Gaps = 7/235 (2%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
P HI ++ DGN RWA + G G+R G E++ E GI+ T++ S N
Sbjct: 30 RPARHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWCHEAGIELATVYLLSTEN 89
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
+R E++ L+++I +++ N+ VR +G+ + ++ L+ A + T
Sbjct: 90 LQRDPDELAALIEIITDVVEE--ICAPANHWSVRTVGDLGLIGEEPARRLRGAVESTPEV 147
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSDVPDPD 183
++ +A Y R EI A++ + + + + V I++ L TS PDPD
Sbjct: 148 ASFHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVDAVTVEGISENLYTSGQPDPD 207
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L+IRT GE+RLS FLLWQ AYSE F +WP F F AL Y+ R RR+G
Sbjct: 208 LVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDFLRALRDYSARHRRYGR 262
>gi|225437860|ref|XP_002263977.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 290
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 68/251 (27%), Positives = 110/251 (43%), Gaps = 24/251 (9%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P+HI IMDGN R+A + L AGH+ G ++ + E+G+K +TI+AFS
Sbjct: 28 LSVGPIPNHIAFIMDGNRRFAKKQNLIEGAGHKVGYLALMSMLRYSYELGVKYVTIYAFS 87
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R E+ ++ L++ +++ L ++V IGN L + + A
Sbjct: 88 IENFKRRPEEVQSVMDLMQEKIEQLINEESILNHFGVRVHFIGNLKLLSAPVRLAAERAM 147
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIES---------------------GSV 160
T N+ L I Y+S +EI A++
Sbjct: 148 LVTACNSKAVLSICVAYTSTNEIMHAVEESCVKKWDEIRELKASGVDCGLTKLEGYEKGE 207
Query: 161 CSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRE 220
++ + I K+L + PDPD++IRT GE RLS+FLLWQ Y WP+
Sbjct: 208 AQDLINLTDIEKHLYMAVAPDPDILIRTSGETRLSNFLLWQSQYCYLYSPSVLWPEIGFW 267
Query: 221 LFFHALNQYNL 231
A+ +
Sbjct: 268 HLLWAVLNFQR 278
>gi|167756902|ref|ZP_02429029.1| hypothetical protein CLORAM_02451 [Clostridium ramosum DSM 1402]
gi|167703077|gb|EDS17656.1| hypothetical protein CLORAM_02451 [Clostridium ramosum DSM 1402]
Length = 193
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 76/192 (39%), Positives = 116/192 (60%)
Query: 49 AAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS 108
++G+K +T++AFS N+ RP E+ + KL K F + L +NN+K+ IG+
Sbjct: 2 HCNKLGVKAMTVYAFSTENFARPEQEVQYIFKLPKDFFELYMKELIENNVKICTIGHLEM 61
Query: 109 LDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSS 168
+ ++ A D+T+ NTGL L AF Y RDEI A K + +++G + ++++ +
Sbjct: 62 APKETQDIINSAIDKTKNNTGLKLCFAFIYGGRDEILEATKKLAMKVKAGELGVNEINET 121
Query: 169 LIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQ 228
+ L T D+P+ DL+IRT GE+RLS+FLLWQ+AY+EF+F WPDF+ A+
Sbjct: 122 VFNDELMTKDLPEVDLMIRTSGEQRLSNFLLWQLAYAEFIFTDVLWPDFNENELDKAIWM 181
Query: 229 YNLRDRRFGGLS 240
Y RDRRFGGL
Sbjct: 182 YQNRDRRFGGLK 193
>gi|189502956|gb|ACE06859.1| unknown [Schistosoma japonicum]
gi|226468238|emb|CAX69796.1| hypothetical protein [Schistosoma japonicum]
Length = 326
Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats.
Identities = 75/234 (32%), Positives = 126/234 (53%), Gaps = 5/234 (2%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ ++ P H+ IMDGN R+A ++ L + GH G ++ + +VG++ ++IF
Sbjct: 18 IRAIKYGPIPKHVAFIMDGNRRFADSKMLKQSDGHLYGFSKLSDTLQWCRDVGVEEVSIF 77
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCVLK 118
FSI+N+ R E+S L+ L + L++ LK ++I +RVIG+ L I +
Sbjct: 78 TFSIDNFNRSPEEVSFLMNLAEEKLQELLDNIEELKADDICIRVIGSLGLLPTKIQSLAA 137
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
+ TR ++ L I Y+SR++I+ A++ + ++ G + D+ L++K L T
Sbjct: 138 QLMLVTRNHSRSILNICMAYNSRNDITNAMETVRLGVKEGKIIPSDITRELLSKCLYTRL 197
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAY--SEFVFIPEYWPDFSRELFFHALNQYN 230
DL+IRT GE RLSDFL WQ + + + FI YWP+FS F ++ Y
Sbjct: 198 SKPLDLLIRTSGEIRLSDFLTWQASENGTIYKFIGNYWPEFSWWDFLSSIFHYQ 251
>gi|298674769|ref|YP_003726519.1| undecaprenyl diphosphate synthase [Methanohalobium evestigatum
Z-7303]
gi|298287757|gb|ADI73723.1| undecaprenyl diphosphate synthase [Methanohalobium evestigatum
Z-7303]
Length = 282
Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats.
Identities = 77/239 (32%), Positives = 126/239 (52%), Gaps = 7/239 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + P+HI IIMDGN R+A G GHRKG ++ +++ + E+G+K LTI
Sbjct: 13 LTQEIKNLPVPEHIAIIMDGNRRFAQHIGKHSYYGHRKGSDITEKVIEWSCEIGVKELTI 72
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFS N+ RP E +L +LI + + +K+R IG+ L + ++
Sbjct: 73 YAFSTENFNRPKHETEKLFELISLKFNEITDDERTHERRMKIRAIGDIERLPIHLQESIE 132
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
+AE T L +A Y R +I +A++ + + I +G + D++ S I++YL +
Sbjct: 133 KAETATCNYENFKLNVALTYGGRQDIVQAVQEMARKISNGYLELDDINESTISEYLYPAC 192
Query: 179 VP---DPDLIIRTGGEKRLSDFLLWQVAYSEF--VFIPEYWPDFSRELFFHALNQYNLR 232
P + DLIIRTGG +R+S+FL WQ +E F +WP F + F ++ Y R
Sbjct: 193 GPSVSNVDLIIRTGGNERISNFLPWQTNGNECATYFCAPFWPSFRKIDFLRSIRLYQSR 251
>gi|224534893|ref|ZP_03675462.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia spielmanii
A14S]
gi|224513833|gb|EEF84158.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia spielmanii
A14S]
Length = 230
Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats.
Identities = 91/234 (38%), Positives = 139/234 (59%), Gaps = 4/234 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M SS P H+GIIMDGN RWA +G+ G+++G++ EIV + ++GIK L+ + FS
Sbjct: 1 MNKSSLPSHVGIIMDGNRRWALGKGVSFSEGYKEGLKRAKEIVIHSLKLGIKYLSFYVFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+R EI EL+ LI S+L+ F KKN IK+ V G+ SL +++ +K++ D +
Sbjct: 61 TENWKRDDCEIKELMFLIASYLRAEFNFYKKNGIKIIVSGDVDSLSEEVKSSIKDSVDFS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ + L L +A NY R+EI RA++ S +D S + +LD ++PD DL
Sbjct: 121 KNFSNLVLNLAINYGGRNEILRAVRKFV----SSDFDLDSLDESTFSNFLDNPELPDLDL 176
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+IRTGG R+S+F LW++AYSE +F WP++ + L+ + R R FG
Sbjct: 177 LIRTGGNIRISNFFLWRIAYSELIFSNVLWPEYYGNRYSKDLDCFQFRRRNFGR 230
>gi|226468240|emb|CAX69797.1| hypothetical protein [Schistosoma japonicum]
Length = 323
Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats.
Identities = 75/234 (32%), Positives = 126/234 (53%), Gaps = 5/234 (2%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ ++ P H+ IMDGN R+A ++ L + GH G ++ + +VG++ ++IF
Sbjct: 18 IRAIKYGPIPKHVAFIMDGNRRFADSKMLKQSDGHLYGFSKLSDTLQWCRDVGVEEVSIF 77
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCVLK 118
FSI+N+ R E+S L+ L + L++ LK ++I +RVIG+ L I +
Sbjct: 78 TFSIDNFNRSPEEVSFLMNLAEEKLQELLDNIEELKADDICIRVIGSLGLLPTKIQSLAA 137
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
+ TR ++ L I Y+SR++I+ A++ + ++ G + D+ L++K L T
Sbjct: 138 QLMLVTRNHSRSILNICMAYNSRNDITNAMETVRLGVKEGKIIPSDITRELLSKCLYTRL 197
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAY--SEFVFIPEYWPDFSRELFFHALNQYN 230
DL+IRT GE RLSDFL WQ + + + FI YWP+FS F ++ Y
Sbjct: 198 SKPLDLLIRTSGEIRLSDFLTWQASENGTIYKFIGNYWPEFSWWDFLSSIFHYQ 251
>gi|18313705|ref|NP_560372.1| hypothetical protein PAE2942 [Pyrobaculum aerophilum str. IM2]
gi|42559855|sp|Q8ZU54|UPPS_PYRAE RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|18161258|gb|AAL64554.1| conserved hypothetical protein [Pyrobaculum aerophilum str. IM2]
Length = 238
Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats.
Identities = 85/237 (35%), Positives = 128/237 (54%), Gaps = 9/237 (3%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEV-GIKNLTIFAFSI 65
S P HI +I DGN R+A G+ ++KG+E + A E IKN+T FA S
Sbjct: 6 SVKIPTHIAVIPDGNRRYAKKTGIDFYHAYKKGVEKVRNFLTWALEFRDIKNVTFFALST 65
Query: 66 NNWRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
N +R E+ L ++ + L++ + N ++VR IG+R L ++ + E E
Sbjct: 66 ENLQRSKIELEILFRIFEDELRRTLEDPLIHDNKVRVRFIGDRSLLPGKVVKYIDELESV 125
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP--D 181
T+ + +L IA Y R EI R IK + SG V + + LDT +P +
Sbjct: 126 TKNYSNYHLTIALGYGGRAEIVRCIKRVL----SGEVRLETFSEEELFQCLDTRGIPNPE 181
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PD+++RTGGEKRLS+FLL+Q AYSE +F+ + WP+ RE + + +Y+ R RRFG
Sbjct: 182 PDVVVRTGGEKRLSNFLLYQTAYSELIFLEKLWPEVEREDLVYIIEEYSRRQRRFGR 238
>gi|147774323|emb|CAN61413.1| hypothetical protein VITISV_029565 [Vitis vinifera]
Length = 384
Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats.
Identities = 68/251 (27%), Positives = 110/251 (43%), Gaps = 24/251 (9%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P+HI IMDGN R+A + L AGH+ G ++ + E+G+K +TI+AFS
Sbjct: 122 LSVGPIPNHIAFIMDGNRRFAKKQNLIEGAGHKVGYLALMSMLRYSYELGVKYVTIYAFS 181
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R E+ ++ L++ +++ L ++V IGN L + + A
Sbjct: 182 IENFKRRPEEVQSVMDLMQEKIEQLINEESILNHFGVRVHFIGNLKLLSAPVRLAAERAM 241
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIES---------------------GSV 160
T N+ L I Y+S +EI A++
Sbjct: 242 LVTACNSKAVLSICVAYTSTNEIMHAVEESCVKKWDEIRELNASGVDCGLTKLEGYEKGE 301
Query: 161 CSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRE 220
++ + I K+L + PDPD++IRT GE RLS+FLLWQ Y WP+
Sbjct: 302 AQDLINLTDIEKHLYMAVAPDPDILIRTSGETRLSNFLLWQSQYCYLYSPSVLWPEIGFW 361
Query: 221 LFFHALNQYNL 231
A+ +
Sbjct: 362 HLLWAVLNFQR 372
>gi|254363994|ref|ZP_04980040.1| short chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis str. Haarlem]
gi|134149508|gb|EBA41553.1| short chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis str. Haarlem]
Length = 262
Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats.
Identities = 75/237 (31%), Positives = 117/237 (49%), Gaps = 7/237 (2%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
S P HI ++ DGN RWA + G G+R G E++ E GI+ T++ S
Sbjct: 28 KSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWCHEAGIELATVYLLST 87
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
N +R E++ L+++I +++ N+ VR +G+ + ++ L+ A + T
Sbjct: 88 ENLQRDPDELAALIEIITDVVEE--ICAPANHWSVRTVGDLGLIGEEPARRLRGAVESTP 145
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSDVPD 181
++ +A Y R EI A++ + + + + V I++ L TS PD
Sbjct: 146 EVASFHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVDAVTVEGISENLYTSGQPD 205
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PD +IRT GE+RLS FLLWQ AYSE F +WP F F AL Y+ R R +G
Sbjct: 206 PDSVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDFLRALRDYSARHRSYGR 262
>gi|219685322|ref|ZP_03540141.1| undecaprenyl pyrophosphate synthetase 1 [Borrelia garinii Far04]
gi|219673095|gb|EED30115.1| undecaprenyl pyrophosphate synthetase 1 [Borrelia garinii Far04]
Length = 230
Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats.
Identities = 87/234 (37%), Positives = 135/234 (57%), Gaps = 4/234 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M +S P H+GIIMDGN RWA +GL G+ +G++ EIV + ++GIK L+ + FS
Sbjct: 1 MNKNSLPSHVGIIMDGNRRWALGKGLSSLEGYEEGLKRAKEIVKHSLKLGIKYLSFYVFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+R EI +L+ LI +L+ F KKN IK+ V G+ SL +++ +K++ +
Sbjct: 61 TENWKRDDCEIEKLMFLITHYLRAEFNFYKKNGIKIIVSGDVESLGEEVRSSIKDSVSFS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ L L +A NY R+EI RA++ S ++ + + +LD ++PD DL
Sbjct: 121 KNFNNLILNLAINYGGRNEILRAVRKFV----SSDFDLESLNENAFSNFLDNPELPDIDL 176
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+IRTGG R+S+F LW++AYSE +F WP++ + L + LR R FG
Sbjct: 177 LIRTGGNIRISNFFLWRIAYSELIFSNVLWPEYYDNRYSKDLECFQLRGRNFGR 230
>gi|119871862|ref|YP_929869.1| undecaprenyl diphosphate synthase [Pyrobaculum islandicum DSM 4184]
gi|119673270|gb|ABL87526.1| Undecaprenyl pyrophosphate synthetase [Pyrobaculum islandicum DSM
4184]
Length = 238
Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats.
Identities = 84/237 (35%), Positives = 133/237 (56%), Gaps = 9/237 (3%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVG-IKNLTIFAFSI 65
S P HI +I DGN R+A GL +++G+E + A E I+N+T +A S
Sbjct: 6 SVKIPSHIAVIPDGNRRFAKKAGLDFYHAYKRGVEKVRSFLLWALEFREIRNVTFYALST 65
Query: 66 NNWRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
N +R E+ L ++ + +K + +N +++R IG+R L ++ +++E E
Sbjct: 66 ENLQRSRLELEILFRIFEEEFRKSLEDPLIHENKVRIRFIGDRSLLPGRVVKLMEELESV 125
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP--D 181
TR + NL A Y R EI R IK + +G V D++ + + LDT D+P +
Sbjct: 126 TRSYSSYNLTFALGYGGRAEIVRCIKRLL----NGEVKIADINEETLFQCLDTRDLPNPE 181
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PD+++RTGGEKRLS+FLL+Q AYSE +F+ + WP+ RE + + +Y+ R RRFG
Sbjct: 182 PDVVVRTGGEKRLSNFLLYQSAYSELIFLDKLWPEIEREDLVYIVEEYSRRQRRFGK 238
>gi|330835760|ref|YP_004410488.1| undecaprenyl pyrophosphate synthetase [Metallosphaera cuprina Ar-4]
gi|329567899|gb|AEB96004.1| undecaprenyl pyrophosphate synthetase [Metallosphaera cuprina Ar-4]
Length = 255
Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats.
Identities = 73/241 (30%), Positives = 119/241 (49%), Gaps = 5/241 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + P+H+GII DGN RWA + G + E++ ++ +KN+T+
Sbjct: 17 LWREIRNGPIPNHVGIIPDGNRRWARYNNFSVNEAYMMGYKKLREVLIWLLDLNVKNVTV 76
Query: 61 FAFSINNW-RRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVL 117
FA S N +R +E+ ++ IK +K+ + K ++VR IG +D+ +
Sbjct: 77 FALSTENCTKRTKTELDIIMGYIKKGIKEMISEEFIDKYEVRVRAIGKLEMTSEDLRSTV 136
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
E ++ + L +A Y R EI A+ + +D E + + KY
Sbjct: 137 NEVMTRSSIYDKRKLTLAICYGGRQEILDAVSRMLKDFE--KGDINTISEQDFRKYFYDE 194
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
++ D DL+IRT GE R+S+FLLW +AYSE F YWPDF + + A+ Y R RR+G
Sbjct: 195 ELEDIDLVIRTSGEMRISNFLLWHLAYSELFFCEAYWPDFRKIDLWRAIRAYQKRARRYG 254
Query: 238 G 238
Sbjct: 255 A 255
>gi|324507560|gb|ADY43204.1| Dehydrodolichyl diphosphate synthase [Ascaris suum]
Length = 303
Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats.
Identities = 76/234 (32%), Positives = 121/234 (51%), Gaps = 4/234 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLT 59
++ M ++ P HI IMDGN R+A + GH KG + +I+ E+ IK +T
Sbjct: 22 LIKLMKTAPMPKHIAFIMDGNRRYARSHCYSSVLDGHAKGFDQLTKILEWCRELCIKEVT 81
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKK---GFYSLKKNNIKVRVIGNRLSLDDDILCV 116
++AFSI N+ R E+ L+ L ++ L++ L + I VR G+ L + +
Sbjct: 82 VYAFSIENFNRAEEEVGGLMTLFENKLQRLFREKDKLIEKEISVRFFGDLSYLPTKVQKL 141
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT 176
+ + E T+ + + Y+++DE+ RA I + I+ G + +D++ LI+ LD+
Sbjct: 142 VAQIELLTKDYKKSVINVCIAYTAQDEMKRAFTYISRGIQKGLLEENDINEYLISHCLDS 201
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
+PDL+IRT GEKRLSDFLLWQ + F WPDF A+ Y
Sbjct: 202 RKSANPDLLIRTSGEKRLSDFLLWQCSNCYIHFDDVLWPDFDFWHLCKAVFGYQ 255
>gi|195941858|ref|ZP_03087240.1| hypothetical protein Bbur8_03114 [Borrelia burgdorferi 80a]
gi|312148528|gb|ADQ31187.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia burgdorferi
JD1]
gi|312149673|gb|ADQ29744.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia burgdorferi
N40]
Length = 230
Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats.
Identities = 87/234 (37%), Positives = 133/234 (56%), Gaps = 4/234 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M S P H+GIIMDGN RWA +GL G+++G++ EIV + VGIK L+ + FS
Sbjct: 1 MNKGSLPSHVGIIMDGNRRWALGKGLSSLEGYKEGLKRAKEIVKYSLRVGIKYLSFYVFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+R EI L+ LI ++L+ F +KN IK+ V G+ SL ++ +K++ +
Sbjct: 61 TENWKRDDCEIENLMFLIANYLRAEFDFYEKNGIKIIVSGDVESLSGEVKSSIKDSISFS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ L L +A NY R+EI RA+K S ++ ++ + +LD ++PD DL
Sbjct: 121 KNFNNLILNLAINYGGRNEILRAVKKFV----SSDFDLESLNENIFSSFLDNPELPDLDL 176
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+IRTGG R+S+F LW++AYSE +F WP++ + L + R R FG
Sbjct: 177 LIRTGGNIRISNFFLWRIAYSELIFSNVLWPEYYDTRYSKDLECFQFRRRNFGR 230
>gi|15790698|ref|NP_280522.1| hypothetical protein VNG1779C [Halobacterium sp. NRC-1]
gi|169236439|ref|YP_001689639.1| di-trans,poly-cis-decaprenylcistransferase / (Z)-prenyl diphosphate
synthase [Halobacterium salinarum R1]
gi|42559881|sp|Q9HP68|UPPS_HALSA RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|10581234|gb|AAG20002.1| conserved hypothetical protein [Halobacterium sp. NRC-1]
gi|167727505|emb|CAP14293.1| di-trans,poly-cis-decaprenylcistransferase / (Z)-prenyl diphosphate
synthase [Halobacterium salinarum R1]
Length = 302
Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats.
Identities = 72/228 (31%), Positives = 116/228 (50%), Gaps = 4/228 (1%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ +I DGN R+A G G++ G ++ +++G++ LT++AFS N+
Sbjct: 23 GAPAHVAVIQDGNRRYAREHGDDPTDGYQSGARTTERVLEWCSDLGVEELTLYAFSTENF 82
Query: 69 RRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
RP + L L++S L++ + + +++R IG+ L + + AE +T
Sbjct: 83 ERPPDQQQHLFDLLESKLREFADADRVHADRVRIRAIGDTGRLPQRVRDAITYAESRTAG 142
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
G L +A Y RDE+ A + + + +G + D+D+ I L TS V D DLII
Sbjct: 143 YDGFTLNVALAYGGRDELLTAARGVADAVAAGDLDPADIDAQAIESRLHTSPVRDVDLII 202
Query: 187 RTGGEKRLSDFLLWQVAYSE--FVFIPEYWPDFSRELFFHALNQYNLR 232
RTGG++R S+FL W SE F YWP+FS+ A+ Y R
Sbjct: 203 RTGGDERTSNFLPWHANGSEAAVFFCTPYWPEFSKVDLLRAIRTYESR 250
>gi|322368359|ref|ZP_08042928.1| undecaprenyl pyrophosphate synthase [Haladaptatus paucihalophilus
DX253]
gi|320552375|gb|EFW94020.1| undecaprenyl pyrophosphate synthase [Haladaptatus paucihalophilus
DX253]
Length = 313
Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats.
Identities = 74/233 (31%), Positives = 120/233 (51%), Gaps = 4/233 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P H+ +I DGN R+A+ +G GHR+G + ++ E+G++ LT++ FS N
Sbjct: 28 SGAPAHVAVIQDGNRRYASKQGGEASDGHREGAKTTERVLDWCDEIGVEELTLYTFSTEN 87
Query: 68 WRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
+ RP E L L+++ L + + + + +R IG+ L + + AE QT
Sbjct: 88 FERPDHEREALFDLLENKLYEFADAERVHDSGVCIRAIGDVQQLPPRVREAIDYAERQTG 147
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
L IA Y R+E+ A +++ +++ESG++ D+ I L + D DLI
Sbjct: 148 DYDNFVLNIALAYGGRNELLGAARDVAREVESGNLDPADISVETIESRLYARPLRDVDLI 207
Query: 186 IRTGGEKRLSDFLLWQVAYSE--FVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
IRTGG++R S+FL W +E F YWP+FS+ F A+ Y R + F
Sbjct: 208 IRTGGDERTSNFLPWHANGNEAAVFFCTPYWPEFSKIDFLRAVRTYESRAQSF 260
>gi|224532924|ref|ZP_03673534.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia burgdorferi
WI91-23]
gi|224512123|gb|EEF82514.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia burgdorferi
WI91-23]
Length = 230
Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats.
Identities = 87/234 (37%), Positives = 133/234 (56%), Gaps = 4/234 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M S P H+GIIMDGN RWA +GL G+++G++ EIV + VGIK L+ + FS
Sbjct: 1 MNKGSLPSHVGIIMDGNRRWALGKGLSSLEGYKEGLKRAKEIVKYSLRVGIKYLSFYVFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+R EI L+ LI ++L+ F +KN IK+ V G+ SL ++ +K++ +
Sbjct: 61 TENWKRDDCEIENLMFLIANYLRAEFDFYEKNGIKIIVSGDVESLSGEVKSSIKDSISFS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ L L +A NY R+EI RA+K S ++ ++ + +LD ++PD DL
Sbjct: 121 KNFNNLILNLAINYGGRNEILRAVKKFV----SSDFDLESLNENVFSSFLDNPELPDLDL 176
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+IRTGG R+S+F LW++AYSE +F WP++ + L + R R FG
Sbjct: 177 LIRTGGNIRISNFFLWRIAYSELIFSNVLWPEYYDTRYSKDLECFQFRRRNFGR 230
>gi|51598383|ref|YP_072571.1| undecaprenyl pyrophosphate synthase [Borrelia garinii PBi]
gi|51572954|gb|AAU06979.1| undecaprenyl diphosphate synthase [Borrelia garinii PBi]
Length = 230
Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats.
Identities = 89/234 (38%), Positives = 135/234 (57%), Gaps = 4/234 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M S P H+GIIMDGN RWA +GL G+ +G++ EIV + +VGIK L+ + FS
Sbjct: 1 MNKRSLPSHVGIIMDGNRRWALGKGLSSLEGYEEGLKRAKEIVKHSLKVGIKYLSFYVFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+R EI +L+ LI +L+ F KKN IK+ V G+ SL +++ +K++ +
Sbjct: 61 TENWKRDDCEIEKLMFLITHYLRAEFNFYKKNGIKIIVSGDVESLGEEVRSSIKDSVSFS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ L L +A NY R+EI RA+K S + ++ + + +LD ++PD DL
Sbjct: 121 KNFNNLVLNLAINYGGRNEILRAVKKFV----SSNFDLESLNENAFSNFLDNPELPDIDL 176
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+IRTGG R+S+F LW++AYSE +F WP++ + L + LR R FG
Sbjct: 177 LIRTGGNIRISNFFLWRIAYSELIFSNVLWPEYYDNRYSKDLECFQLRGRNFGR 230
>gi|29841377|gb|AAP06409.1| similar to GenBank Accession Number BC003643 RIKEN cDNA 3222401G21
gene in Homo sapiens [Schistosoma japonicum]
Length = 317
Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats.
Identities = 75/232 (32%), Positives = 125/232 (53%), Gaps = 5/232 (2%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ P H+ IMDGN R+A ++ L + GH G ++ + +VG++ ++IF F
Sbjct: 11 AIKYGPIPKHVAFIMDGNRRFADSKMLKQSDGHLYGFSKLSDTLQWCRDVGVEEVSIFTF 70
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
SI+N+ R E+S L+ L + L++ LK ++I +RVIG+ L I + +
Sbjct: 71 SIDNFNRSPEEVSFLMNLAEEKLQELLDNIEELKADDICIRVIGSLGLLPTKIQSLAAQL 130
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
TR ++ L I Y+SR++I+ A++ + ++ G + D+ L++K L T
Sbjct: 131 MLVTRNHSRSILNICMAYNSRNDITNAMETVRLGVKEGKIIPSDITRELLSKCLYTRLSK 190
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAY--SEFVFIPEYWPDFSRELFFHALNQYN 230
DL+IRT GE RLSDFL WQ + + + FI YWP+FS F ++ Y
Sbjct: 191 PLDLLIRTSGEIRLSDFLTWQASENGTIYKFIGNYWPEFSWWDFLSSIFHYQ 242
>gi|325969297|ref|YP_004245489.1| undecaprenyl pyrophosphate synthase [Vulcanisaeta moutnovskia
768-28]
gi|323708500|gb|ADY01987.1| Undecaprenyl pyrophosphate synthase [Vulcanisaeta moutnovskia
768-28]
Length = 238
Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats.
Identities = 90/238 (37%), Positives = 135/238 (56%), Gaps = 5/238 (2%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
M + P H+G+I DGN RWA GLP +R G + E + + + GIK +T++ S
Sbjct: 1 MPGAVPVHVGVIPDGNRRWARKVGLPITEAYRIGSDKVEEFLDWSLDFGIKVVTVYVLST 60
Query: 66 NNW-RRPVSEISELVKLIKSFLKKGFY--SLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
N+ RR E+ L L+K L K + +N ++VRVIG L +D+ ++ E+
Sbjct: 61 ENFLRRSKLELDLLYSLLKEKLIKIRRDVRIHRNRVRVRVIGRTWLLPEDVRREIELTEE 120
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD--VP 180
T + L +A Y R EI A+K + D SG V D+D + + KYL +D P
Sbjct: 121 TTADYSDHYLNLAVVYGGRQEIIDAMKKLLIDYNSGKVNISDLDENALFKYLYVNDEPYP 180
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+PDL+IRTGGE R+S+FLL++ AYSE + +YWP+ +RE A+++Y R+RRFG
Sbjct: 181 EPDLVIRTGGEHRISNFLLYETAYSELYILNKYWPEITREDLKQAIDEYERRERRFGR 238
>gi|171186222|ref|YP_001795141.1| undecaprenyl diphosphate synthase [Thermoproteus neutrophilus
V24Sta]
gi|170935434|gb|ACB40695.1| undecaprenyl diphosphate synthase [Thermoproteus neutrophilus
V24Sta]
Length = 238
Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats.
Identities = 85/237 (35%), Positives = 132/237 (55%), Gaps = 9/237 (3%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVG-IKNLTIFAFSI 65
S P HI +I DGN R+A GL +++G+E + E+ I+N+T +A S
Sbjct: 6 SVKIPSHIAVIPDGNRRYAKKAGLDFYHAYKRGVEKVRSFLLWTLELREIRNVTFYALST 65
Query: 66 NNWRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
N RR E+ L ++ + +K + N +++R IG+R L ++ +++E E
Sbjct: 66 ENLRRSRLELEILFRIFEEEFRKTLEDPLIHDNRVRIRFIGDRSPLPGRVVKLMEELESV 125
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP--D 181
TR T NL A Y R EI R +K + SG V D++ + + LDT D+P +
Sbjct: 126 TRNYTSYNLTFALGYGGRAEIVRCVKRLL----SGEVKIADINEDTLFQCLDTRDLPNPE 181
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PD+++RTGGEKRLS+FLL+Q AYSE +F+ + WP+ RE + + +Y+ R RRFG
Sbjct: 182 PDVVVRTGGEKRLSNFLLYQAAYSELIFLDKLWPEVEREDLAYIVEEYSRRQRRFGR 238
>gi|216264536|ref|ZP_03436528.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia burgdorferi
156a]
gi|215981009|gb|EEC21816.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia burgdorferi
156a]
Length = 230
Score = 224 bits (572), Expect = 7e-57, Method: Composition-based stats.
Identities = 87/234 (37%), Positives = 133/234 (56%), Gaps = 4/234 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M S P H+GIIMDGN RWA +GL G+++G++ EIV + VGIK L+ + FS
Sbjct: 1 MNKGSLPSHVGIIMDGNRRWALGKGLASLEGYKEGLKRAKEIVKYSLRVGIKYLSFYVFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+R EI L+ LI ++L+ F +KN IK+ V G+ SL ++ +K++ +
Sbjct: 61 TENWKRDDCEIENLMFLIANYLRAEFDFYEKNGIKIIVSGDVESLSGEVKSSIKDSISFS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ L L +A NY R+EI RA+K S ++ ++ + +LD ++PD DL
Sbjct: 121 KNFNNLILNLAINYGGRNEILRAVKKFV----SSDFDLESLNENIFSSFLDNPELPDLDL 176
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+IRTGG R+S+F LW++AYSE +F WP++ + L + R R FG
Sbjct: 177 LIRTGGNIRISNFFLWRIAYSELIFSNVLWPEYYDTRYSKDLECFQFRRRNFGR 230
>gi|163731913|ref|ZP_02139360.1| undecaprenyl diphosphate synthase [Roseobacter litoralis Och 149]
gi|161395367|gb|EDQ19689.1| undecaprenyl diphosphate synthase [Roseobacter litoralis Och 149]
Length = 199
Score = 224 bits (572), Expect = 7e-57, Method: Composition-based stats.
Identities = 91/199 (45%), Positives = 124/199 (62%)
Query: 43 FNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRV 102
EIV A VG+K LTIFAFS NW+R +E++ L+ L K ++ + L ++VR
Sbjct: 1 MREIVEACPSVGVKYLTIFAFSTENWKRTQAEVAGLMSLFKRYIMRETRELNTYGVRVRF 60
Query: 103 IGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCS 162
IG+R LD + ++ E E+ T NT ++L IA NY RDE++RA K + QD+ +G +
Sbjct: 61 IGDRTRLDSTLARLMTELENATAGNTNMHLTIAINYGGRDEVARATKRLAQDVANGILKP 120
Query: 163 HDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELF 222
DVD + KYLDT +PDPDL+IRT GE R+S+FLLWQ AYSE+ FI WPDF+R F
Sbjct: 121 QDVDEETLPKYLDTYVLPDPDLVIRTSGEARISNFLLWQSAYSEYEFIDTLWPDFTRNEF 180
Query: 223 FHALNQYNLRDRRFGGLSK 241
Y R+RR+GG
Sbjct: 181 EEVCAAYGGRERRYGGAKA 199
>gi|91772122|ref|YP_564814.1| undecaprenyl pyrophosphate synthetase [Methanococcoides burtonii
DSM 6242]
gi|91711137|gb|ABE51064.1| undecaprenyl diphosphate synthase [Methanococcoides burtonii DSM
6242]
Length = 283
Score = 224 bits (572), Expect = 7e-57, Method: Composition-based stats.
Identities = 71/239 (29%), Positives = 122/239 (51%), Gaps = 7/239 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ASM + P+HI IIMDGN R+A G GH +G ++ ++ + E+G+K LT+
Sbjct: 16 LLASMKGKAVPEHIAIIMDGNRRFAGKLGKRVDYGHSRGADITERVIEWSYEIGVKELTV 75
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLK--KGFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFS N+ R E L +LI + + + I+VR +G+ L ++ +
Sbjct: 76 YAFSTENFNRTDDETVRLFELIANKFDYMRKNERTHEREIRVRAVGDIGLLSKELQEATR 135
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
E+ T+ L +A Y R +I +A+K + + + D+ + +A++L +
Sbjct: 136 RIEEATKDYRKFKLNVAIAYGGRQDIVQAVKKMADKVLINELMPEDISENTVAEHLYPIE 195
Query: 179 VP---DPDLIIRTGGEKRLSDFLLWQVAYSEF--VFIPEYWPDFSRELFFHALNQYNLR 232
P + DLIIRTGG +R+S+FL WQ +E F +WP+F + ++ Y R
Sbjct: 196 SPSVSNVDLIIRTGGNERISNFLPWQANGNECAAYFCAPFWPEFRKIDLLRSIRIYQTR 254
>gi|149001624|ref|ZP_01826597.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
SP14-BS69]
gi|147760082|gb|EDK67071.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
SP14-BS69]
Length = 198
Score = 224 bits (572), Expect = 7e-57, Method: Composition-based stats.
Identities = 84/198 (42%), Positives = 111/198 (56%), Gaps = 4/198 (2%)
Query: 46 IVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGN 105
+ AA ++G+K +T++AFS NW RP E+ ++ L F L NN+K+++IG
Sbjct: 1 MTKAANKLGVKVITVYAFSTENWTRPDQEVKFIMNLPVEFYDNYVPELHANNVKIQMIGE 60
Query: 106 RLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV 165
L L +AE+ T+ NTGL L A NY R EI++A+K I QD+ + D+
Sbjct: 61 TDRLPKQTFEALTKAEELTKNNTGLILNFALNYGGRAEITQALKLISQDVLDAKINPGDI 120
Query: 166 DSSLIAKYLDTSDVP----DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSREL 221
LI YL T +P DPDLIIRT GE RLS+FL WQ AYSE F WPDF
Sbjct: 121 TEELIGNYLFTQHLPKDLRDPDLIIRTSGELRLSNFLPWQGAYSELYFTDTLWPDFDEAA 180
Query: 222 FFHALNQYNLRDRRFGGL 239
A+ YN R RRFGG+
Sbjct: 181 LQEAILAYNRRHRRFGGV 198
>gi|219684868|ref|ZP_03539810.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia garinii PBr]
gi|219671813|gb|EED28868.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia garinii PBr]
Length = 230
Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats.
Identities = 88/234 (37%), Positives = 135/234 (57%), Gaps = 4/234 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M +S P H+GIIMDGN RWA +GL G+ +G++ EIV + +VGIK L+ + FS
Sbjct: 1 MNKNSLPSHVGIIMDGNRRWALGKGLSSLEGYEEGLKRAKEIVKHSLKVGIKYLSFYVFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW+R EI +L+ LI +L+ F KKN IK+ V G+ SL +++ +K++ +
Sbjct: 61 TENWKRDDCEIEKLMFLITHYLRAEFNFYKKNGIKIIVSGDVESLGEEVRSSIKDSVSFS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ L L +A NY R+EI RA++ S ++ + + +LD ++PD DL
Sbjct: 121 KNFNNLILNLAINYGGRNEILRAVRKFV----SSDFDLESLNENAFSNFLDNPELPDIDL 176
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+IRTGG R+S+F LW++AYSE +F WP++ + L + LR R FG
Sbjct: 177 LIRTGGNIRISNFFLWRIAYSELIFSNVLWPEYYDNRYSKDLECFQLRGRNFGR 230
>gi|327310211|ref|YP_004337108.1| undecaprenyl diphosphate synthase [Thermoproteus uzoniensis 768-20]
gi|326946690|gb|AEA11796.1| undecaprenyl diphosphate synthase [Thermoproteus uzoniensis 768-20]
Length = 234
Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats.
Identities = 91/238 (38%), Positives = 134/238 (56%), Gaps = 9/238 (3%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEV-GIKNLTIFAFS 64
MS+ P HI +I DGN R+A GL +R G+E + E I+++T FA S
Sbjct: 1 MSAELPRHIAVIPDGNRRYARKYGLSLVEAYRHGVEKVRKFATWVLEYRDIRHMTFFALS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
N +R +E+ L ++ K+ +++ + +N ++VR IG+R L D++ ++ ED
Sbjct: 61 TENLQRSRAELEVLFRIFKNEIRRTQEDPIIHENKVRVRFIGDRSLLPQDLVKEMERLED 120
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV--P 180
T + +L +A Y R EI R IK I SG V VD + + + LDTS + P
Sbjct: 121 ITSSYSDYDLTLALGYGGRAEIVRCIKRII----SGEVRLEAVDENSLFRCLDTSYLKHP 176
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+PD++IRTGGEKRLS+FLL+Q AYSE F+ +YWP+ RE L +Y R RRFG
Sbjct: 177 EPDVLIRTGGEKRLSNFLLYQTAYSELFFLDKYWPEIEREDLRAVLEEYATRQRRFGR 234
>gi|149238383|ref|XP_001525068.1| dehydrodolichyl diphosphate synthetase [Lodderomyces elongisporus
NRRL YB-4239]
gi|146451665|gb|EDK45921.1| dehydrodolichyl diphosphate synthetase [Lodderomyces elongisporus
NRRL YB-4239]
Length = 350
Score = 224 bits (571), Expect = 9e-57, Method: Composition-based stats.
Identities = 77/238 (32%), Positives = 124/238 (52%), Gaps = 8/238 (3%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P H+GIIMDGN R+A + GH G + I+ E G++ T++AFS
Sbjct: 26 ISTGPVPKHVGIIMDGNRRYARTHKIEIKEGHSMGFDTMANILELLYESGVQAATVYAFS 85
Query: 65 INNWRRPVSEISELVKLIKSFL---KKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N+ R E+ L+ L K+ + K ++++++GN L D+L +L E E
Sbjct: 86 IENFNRSSYEVKWLMDLAKAKFTQINQNGLLCKDYGVRIKILGNLKLLPADVLEILHETE 145
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ T+ NT L + F Y+SRDE++ AI+ + + + +++ I KYL T D P
Sbjct: 146 EITKNNTRAVLNVCFPYTSRDEMTHAIRRVVDETTRSQI---EINEETIDKYLYTGDSPP 202
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFV--FIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL++RT G RLSDFLLWQ + F+ + WP+F+ L +Y+ +G
Sbjct: 203 LDLLVRTSGTFRLSDFLLWQCVSPDCAIEFVDKLWPEFTPWDMVKVLIKYSFNKYWYG 260
>gi|222823978|ref|YP_002575552.1| undecaprenyl diphosphate synthetase [Campylobacter lari RM2100]
gi|222539200|gb|ACM64301.1| undecaprenyl diphosphate synthetase [Campylobacter lari RM2100]
Length = 222
Score = 224 bits (571), Expect = 9e-57, Method: Composition-based stats.
Identities = 74/227 (32%), Positives = 124/227 (54%), Gaps = 9/227 (3%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ ++MDGN RWA GL G+ +G +V +I+ + I+NLT++AFS NW+RP
Sbjct: 5 KHLAVVMDGNRRWARKNGLLEKIGYTQGAKVVEKIIEVCVDEKIQNLTLYAFSTENWQRP 64
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E+ L KL+ +L + N ++ + IGN LD+ L ++ ++QT+ T L
Sbjct: 65 KEEVEFLFKLLNKYLDESLNKFITNEVRFKAIGNLSLLDELTLKKIQNFQEQTKNYTKLC 124
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+ +A +Y +DEI RA+K + + S +++ I LD S+ D DL +R G
Sbjct: 125 VNLAISYGGKDEIVRAVKKVLEK-------SLEINEENIQANLDLSE--DVDLFLRVGSA 175
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
KR+S+FL+WQ +Y+E F +P +++ + + + R R FG
Sbjct: 176 KRISNFLIWQTSYAEIYFSQTLFPALTKKEITNIITDFKKRKRTFGK 222
>gi|146302956|ref|YP_001190272.1| undecaprenyl pyrophosphate synthetase [Metallosphaera sedula DSM
5348]
gi|145701206|gb|ABP94348.1| Undecaprenyl pyrophosphate synthetase [Metallosphaera sedula DSM
5348]
Length = 255
Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats.
Identities = 75/241 (31%), Positives = 121/241 (50%), Gaps = 5/241 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P+H+GII DGN RWA + + G + ++ ++G+KN+T+
Sbjct: 17 LWREIRKGPIPNHVGIIPDGNRRWARSNNSSINEAYLMGYKKLRNVLIWLLDLGVKNVTV 76
Query: 61 FAFSINNW-RRPVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVL 117
FA S N +R +E+ ++ IK +++ + + IKVR IG + DD+ +
Sbjct: 77 FALSTENCTKRTRTELDVIMGYIKRGIEEMVTENFVDRYRIKVRAIGKLEMVSDDLRDTV 136
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
K+ +++ L +A Y R EI A+ + +D + ++ KY
Sbjct: 137 KKVMERSASYLDRKLTLAICYGGRQEILDAVSRMIRD--TNKKDLSNLTEEEFRKYFYDE 194
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
++ D DL+IRT GE R+S+FLLW +AYSE F YWPDF R + A+ Y R RRFG
Sbjct: 195 ELSDIDLVIRTSGEMRISNFLLWHLAYSELFFCEAYWPDFRRIDLWRAIRAYQRRVRRFG 254
Query: 238 G 238
Sbjct: 255 A 255
>gi|224533974|ref|ZP_03674558.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia burgdorferi
CA-11.2a]
gi|224512810|gb|EEF83177.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia burgdorferi
CA-11.2a]
Length = 230
Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 88/234 (37%), Positives = 133/234 (56%), Gaps = 4/234 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M S P H+GIIMDGN RWA +GL G+++G++ EIV + VGIK L+ + FS
Sbjct: 1 MNKGSLPSHVGIIMDGNRRWALGKGLSSLEGYKEGLKRAKEIVKYSLRVGIKYLSFYVFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRR EI L+ LI ++L+ F +KN IK+ V G+ SL ++ +K++ +
Sbjct: 61 TENWRRDDCEIENLMFLIANYLRAEFDFYEKNGIKIIVSGDIESLSGEVKSSIKDSISFS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ L L +A NY R+EI RA+K S ++ ++ + +LD ++PD DL
Sbjct: 121 KNFNNLILNLAINYGGRNEILRAVKKFV----SSDFDLESLNENIFSSFLDNPELPDLDL 176
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+IRTGG R+S+F LW++AYSE +F WP++ + L + R R FG
Sbjct: 177 LIRTGGNIRISNFFLWRIAYSELIFSNVLWPEYYDTRYSKDLECFQFRRRNFGR 230
>gi|329766443|ref|ZP_08257987.1| undecaprenyl diphosphate synthase [Candidatus Nitrosoarchaeum
limnia SFB1]
gi|329137042|gb|EGG41334.1| undecaprenyl diphosphate synthase [Candidatus Nitrosoarchaeum
limnia SFB1]
Length = 227
Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 78/227 (34%), Positives = 119/227 (52%), Gaps = 4/227 (1%)
Query: 16 IIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEI 75
+I+DGN RWA GH KG + ++ E IK +T++A S N R E+
Sbjct: 1 MILDGNRRWAKRHLTIPKTGHWKGADAVENLLDWCEEFDIKIITLYALSAENLDRDDEEL 60
Query: 76 SELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLF 133
L +LI+ L+K + + KN ++V+ IG L + I +L + T+ L
Sbjct: 61 KHLYELIRIRLEKLYNDPRIHKNKMRVKGIGRIELLPESIREILDRLDVATKNYDNHFLN 120
Query: 134 IAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD--PDLIIRTGGE 191
IA Y ++E+ A+K I + I+ G++ D+ I L TS +P PD+I+RT GE
Sbjct: 121 IALAYGGQNELVDAVKKIAEKIKVGTLDVKDISKKEIESNLYTSHLPQSSPDMILRTSGE 180
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
KRLS FL+WQ AYSE +F+ +WP+F + A+ + R RR G
Sbjct: 181 KRLSGFLMWQSAYSELIFMDIFWPEFRKIDLMRAIRTFQERKRRLGK 227
>gi|225549267|ref|ZP_03770240.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia burgdorferi
94a]
gi|225370125|gb|EEG99565.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia burgdorferi
94a]
Length = 230
Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 88/234 (37%), Positives = 134/234 (57%), Gaps = 4/234 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M S P H+GIIMDGN RWA +GL G+++G++ EIV + VGIK L+ + FS
Sbjct: 1 MNKGSLPSHVGIIMDGNRRWALGKGLSSLEGYKEGLKRAKEIVKYSLRVGIKCLSFYVFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRR EI L+ LI ++L+ F +KN IK+ V G+ SL +++ +K++ +
Sbjct: 61 TENWRRDYCEIENLMFLIANYLRAEFDFYEKNGIKIIVSGDIESLSEEVKSSIKDSISFS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ L L +A NY R+EI RA+K S ++ ++ + +LD ++PD DL
Sbjct: 121 KNFNNLILNLAINYGGRNEILRAVKKFA----SSDFDLESLNENIFSSFLDNPELPDLDL 176
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+IRTGG R+S+F LW++AYSE +F WP++ + L + R R FG
Sbjct: 177 LIRTGGNIRISNFFLWRIAYSELIFSNVLWPEYYDTRYSKDLECFQFRRRNFGR 230
>gi|257053890|ref|YP_003131723.1| undecaprenyl diphosphate synthase [Halorhabdus utahensis DSM 12940]
gi|256692653|gb|ACV12990.1| undecaprenyl diphosphate synthase [Halorhabdus utahensis DSM 12940]
Length = 309
Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats.
Identities = 77/227 (33%), Positives = 116/227 (51%), Gaps = 4/227 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +I DGN R+A G AGHR+G E ++ E+GI+ LT++AFS N+ R
Sbjct: 25 PTHIAVIQDGNRRYARKEGQETSAGHREGAETTEALLEWCDELGIEELTLYAFSTENFDR 84
Query: 71 PVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
P + + L LI+ L S + + +++R IG L + + + AE QTR
Sbjct: 85 PADQRAVLFDLIEDKLYDFADSDRVHEAGVRIRAIGETHRLPERVREAIDYAEAQTRGYD 144
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+L IA Y R E+ A+K++ D++ G + +D + L D DLIIRT
Sbjct: 145 QFHLNIALAYGGRAELLGAVKDLAADVDRGDLDPATIDVETVENRLYEGPTRDVDLIIRT 204
Query: 189 GGEKRLSDFLLWQVAYSE--FVFIPEYWPDFSRELFFHALNQYNLRD 233
GG++R S+FL W +E F YWP+F + F A+ Y R+
Sbjct: 205 GGDERTSNFLPWHANGNEAAAYFCAPYWPEFRKIDFLRAIRTYEHRE 251
>gi|226320688|ref|ZP_03796246.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia burgdorferi
29805]
gi|226233904|gb|EEH32627.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia burgdorferi
29805]
Length = 230
Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats.
Identities = 88/234 (37%), Positives = 133/234 (56%), Gaps = 4/234 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M S P H+GIIMDGN RWA +GL G+++G++ EIV + VGIK L+ + FS
Sbjct: 1 MNKGSLPSHVGIIMDGNRRWALGKGLSSLEGYKEGLKRAKEIVKYSLRVGIKYLSFYVFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRR EI L+ LI ++L+ F +KN IK+ V G+ SL ++ +K++ +
Sbjct: 61 TENWRRDDCEIENLMFLIANYLRAEFDFYEKNGIKIIVSGDVESLSGEVKSSIKDSISFS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ L L +A NY R+EI RA+K S ++ ++ + +LD ++PD DL
Sbjct: 121 KNFNNLILNLAINYGGRNEILRAVKKFV----SSDFDLESLNENIFSSFLDNPELPDLDL 176
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+IRTGG R+S+F LW++AYSE +F WP++ + L + R R FG
Sbjct: 177 LIRTGGNIRISNFFLWRIAYSELIFSNVLWPEYYDTRYSKDLECFQFRRRNFGR 230
>gi|313125504|ref|YP_004035768.1| undecaprenyl pyrophosphate synthetase [Halogeometricum borinquense
DSM 11551]
gi|312291869|gb|ADQ66329.1| Undecaprenyl pyrophosphate synthetase [Halogeometricum borinquense
DSM 11551]
Length = 310
Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats.
Identities = 75/231 (32%), Positives = 116/231 (50%), Gaps = 4/231 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
P H+ II DGN R+A RG GH++G + +++ E G++ LT++ FS N
Sbjct: 22 GGGPAHVAIIQDGNRRYARRRGDEAPDGHKEGAKTAEQVLHWCEEFGVEELTLYTFSTEN 81
Query: 68 WRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
+ RP E+ L LI+ L + + + +++ IG L + ++ AE +TR
Sbjct: 82 FDRPQEELEPLFDLIEEKLYEFADAERVHEAGVRICTIGETDRLPPRVREAIEYAESRTR 141
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
G L IA Y R E+ A++++ +D+ SG++ DV I L D DLI
Sbjct: 142 GYDGFCLNIALAYGGRAELLGAVRDVARDVTSGTLSPDDVTVEEIDSRLCQHPTRDVDLI 201
Query: 186 IRTGGEKRLSDFLLWQVAYSE--FVFIPEYWPDFSRELFFHALNQYNLRDR 234
IRTGG +R S+FL W +E F YWP+FS+ F L Y R++
Sbjct: 202 IRTGGAERTSNFLPWHANGNEAAVYFCAPYWPEFSKVDFLRGLRTYESREK 252
>gi|162454473|ref|YP_001616840.1| undecaprenyl diphosphate synthase [Sorangium cellulosum 'So ce 56']
gi|161165055|emb|CAN96360.1| Undecaprenyl diphosphate synthase [Sorangium cellulosum 'So ce 56']
Length = 286
Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats.
Identities = 87/229 (37%), Positives = 135/229 (58%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + + P H+GIIMDGNGRWA RG PR AGH+ G IV +G++ LT++AFS
Sbjct: 4 VEARNLPRHVGIIMDGNGRWAELRGEPREAGHKAGSAAVRRIVRVCRRLGVEALTLYAFS 63
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW RP +E+ L+ L++ +L + +N+I++ IG+ L + + VL +
Sbjct: 64 EQNWARPRNEVDALMGLLREYLMSERCEILENDIRLVAIGDISRLPEGVRDVLDPLRKAS 123
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N + L +A +Y +R+EI+ A + + + +G + +D +L+A L + V +PDL
Sbjct: 124 ATNRQMTLALALSYGAREEIAAAARELAMEAVAGRLDPESIDGALLAARLPSLSVGEPDL 183
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
IIRTGGE+RLS+FLL+ AY+E F WPDF+ + F A+ Y RD
Sbjct: 184 IIRTGGEQRLSNFLLYGAAYAELSFTERLWPDFTEDDLFAAIAAYQRRD 232
>gi|313833263|gb|EFS70977.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL056PA1]
Length = 273
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 77/245 (31%), Positives = 123/245 (50%), Gaps = 10/245 (4%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAAR--GLPRCAGHRKGIEVFNEIVAAAAEVGIKNL 58
++ + S P H+ ++ DG RWA G P AG+ G + E VGI +
Sbjct: 32 LLDQLDRSRLPQHVAVLADGTRRWARLNAPGEPLVAGYEAGADRLREFCTWCDAVGIPII 91
Query: 59 TIFAFSINNWRRPVS-EISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
T++ S +N +R + E+ L+K+I+S + + +V+ +G+ L DD+ L
Sbjct: 92 TLWVLSTDNLQRAETGELGPLLKVIESLVDSLAD---NSRWRVQAVGDLDLLPDDMAESL 148
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKY 173
A + + G+++ +A Y R E+ A +++ + D+ + I +
Sbjct: 149 CRAGRTSIGHVGMHINVAVAYGGRHELRDAFRSLLAEEAEKGTSLADLARTLEIDQIEDH 208
Query: 174 LDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
L T PDPDLIIRT GE+RLS FL+WQ A+SEF F WPDF + F AL + R+
Sbjct: 209 LYTRGQPDPDLIIRTSGEQRLSGFLMWQSAHSEFYFCEALWPDFRKVDFLRALRSFTQRE 268
Query: 234 RRFGG 238
RR+G
Sbjct: 269 RRYGR 273
>gi|223889163|ref|ZP_03623752.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia burgdorferi
64b]
gi|223885412|gb|EEF56513.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia burgdorferi
64b]
Length = 230
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 89/234 (38%), Positives = 134/234 (57%), Gaps = 4/234 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M S P H+GIIMDGN RWA +GL G+++G++ EIV + VGIK L+ + FS
Sbjct: 1 MNKGSLPSHVGIIMDGNRRWALGKGLSSLEGYKEGLKRAKEIVKYSLRVGIKYLSFYVFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRR EI L+ LI ++L+ F +KN IK+ V G+ SL ++ +K++ +
Sbjct: 61 TENWRRDDCEIENLMFLIANYLRAEFDFYEKNGIKIIVSGDVESLSGEVKSSIKDSISFS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ L L +A NY R+EI RA+K I S ++ ++ + +LD ++PD DL
Sbjct: 121 KNFNNLILNLAINYGGRNEILRAVKKIV----SSDFDLESLNENIFSSFLDNPELPDLDL 176
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+IRTGG R+S+F LW++AYSE +F WP++ + L + R R FG
Sbjct: 177 LIRTGGNIRISNFFLWRIAYSELIFSNVLWPEYYDTRYSKDLECFQFRRRNFGR 230
>gi|68467877|ref|XP_722097.1| hypothetical protein CaO19.11511 [Candida albicans SC5314]
gi|68468194|ref|XP_721936.1| hypothetical protein CaO19.4028 [Candida albicans SC5314]
gi|46443879|gb|EAL03158.1| hypothetical protein CaO19.4028 [Candida albicans SC5314]
gi|46444045|gb|EAL03323.1| hypothetical protein CaO19.11511 [Candida albicans SC5314]
gi|238882906|gb|EEQ46544.1| dehydrodolichyl diphosphate synthetase [Candida albicans WO-1]
Length = 328
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 82/230 (35%), Positives = 126/230 (54%), Gaps = 8/230 (3%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+M+ P H+GIIMDGN R+A + GH G + I+ E G+K T++AFS
Sbjct: 26 IMTGPVPQHVGIIMDGNRRYAKTHKIEIKEGHSLGFDTMASILELLYESGVKCATVYAFS 85
Query: 65 INNWRRPVSEISELVKLIKSFL---KKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R E+ L++L KS + ++ +K+R++GN L D+L +L++ E
Sbjct: 86 IENFKRSQYEVKWLMELAKSKFTQINQHGLLCEEYGVKIRILGNTKLLPRDVLEILEKTE 145
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ T+ NT L + F Y+SRDEI+ +IK++ + G + D+ I ++L T DVP
Sbjct: 146 EITKNNTRAVLNVCFPYTSRDEITHSIKSVVDEATKGGI---DITEEAIDRHLYTKDVPP 202
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEF--VFIPEYWPDFSRELFFHALNQY 229
DL++RT G RLSDFLLWQ E VF+ + WP F L +
Sbjct: 203 LDLLVRTSGTFRLSDFLLWQTVSPECAVVFVDKLWPAFKPWDMLKILLNW 252
>gi|126459770|ref|YP_001056048.1| undecaprenyl pyrophosphate synthetase [Pyrobaculum calidifontis JCM
11548]
gi|126249491|gb|ABO08582.1| Undecaprenyl pyrophosphate synthetase [Pyrobaculum calidifontis JCM
11548]
Length = 234
Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats.
Identities = 85/235 (36%), Positives = 129/235 (54%), Gaps = 9/235 (3%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVG-IKNLTIFAFSINN 67
P HI +I DGN R+A GL +++G+E + A E IKN+T FA S N
Sbjct: 4 KIPTHIAVIPDGNRRYAKKVGLDFYHAYKRGVEKVRSFLLWALEYREIKNVTFFALSTEN 63
Query: 68 WRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
+R E+ L ++ + L+K + +N ++VR IG+ L ++ +E E T+
Sbjct: 64 LQRSRLELEILFRIFEEELRKTLEDPLIHENRVRVRFIGDMSLLPSRVVKWAEELEAATK 123
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP--DPD 183
+L +A Y R EI R +K + SG V +V + + LDT D+P +PD
Sbjct: 124 NYGNYHLTLALGYGGRAEIVRCVKRLL----SGEVKLAEVTEESLFQCLDTRDLPNPEPD 179
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+++RTGGEKRLS+FLL+Q AYSE VF+ + WP+ RE + + +Y+ R RRFG
Sbjct: 180 VVVRTGGEKRLSNFLLYQTAYSELVFLDKLWPEVEREDLAYIVEEYSRRQRRFGR 234
>gi|221217429|ref|ZP_03588900.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia burgdorferi
72a]
gi|225549869|ref|ZP_03770831.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia burgdorferi
118a]
gi|221192707|gb|EEE18923.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia burgdorferi
72a]
gi|225369560|gb|EEG99011.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia burgdorferi
118a]
Length = 230
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 88/234 (37%), Positives = 133/234 (56%), Gaps = 4/234 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M S P H+GIIMDGN RWA +GL G+++G++ EIV + VGIK L+ + FS
Sbjct: 1 MNKGSLPSHVGIIMDGNRRWALGKGLSSLEGYKEGLKRAKEIVKYSLRVGIKCLSFYVFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRR EI L+ LI ++L+ F +KN IK+ V G+ SL ++ +K++ +
Sbjct: 61 TENWRRDDCEIENLMFLIANYLRAEFDFYEKNGIKIIVSGDIESLSGEVKSSIKDSISFS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ L L +A NY R+EI RA+K S ++ ++ + +LD ++PD DL
Sbjct: 121 KNFNNLILNLAINYGGRNEILRAVKKFV----SSDFDLESLNENIFSSFLDNPELPDLDL 176
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+IRTGG R+S+F LW++AYSE +F WP++ + L + R R FG
Sbjct: 177 LIRTGGNIRISNFFLWRIAYSELIFSNVLWPEYYDTRYSKDLECFQFRRRNFGR 230
>gi|241956133|ref|XP_002420787.1| cis-prenyltransferase, putative; dehydrodolichyl diphosphate
synthetase, putative [Candida dubliniensis CD36]
gi|223644129|emb|CAX41872.1| cis-prenyltransferase, putative [Candida dubliniensis CD36]
Length = 327
Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats.
Identities = 80/230 (34%), Positives = 124/230 (53%), Gaps = 8/230 (3%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+M+ P H+GIIMDGN R+A + GH G + I+ E G+K T++AFS
Sbjct: 26 IMTGPVPQHVGIIMDGNRRYAKTHKIEIKEGHSLGFDTMASILELLYESGVKCATVYAFS 85
Query: 65 INNWRRPVSEISELVKLIKSFL---KKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R E+ L++L KS + ++ +K+R++GN L D+L +L+ E
Sbjct: 86 IENFKRSQYEVKWLMELAKSKFTQINQHGLLCEEYGVKIRILGNTKLLPKDVLEILERTE 145
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ T+ N L + F Y+SRDEI+ +IK++ + G + ++ I K+L T DVP
Sbjct: 146 EITKNNKRAVLNVCFPYTSRDEITHSIKSVVDEATKGGI---EITEEAIDKHLYTKDVPP 202
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEF--VFIPEYWPDFSRELFFHALNQY 229
DL++RT G RLSDFLLWQ + VF+ + WP F L +
Sbjct: 203 LDLLVRTSGTFRLSDFLLWQTVSPDCAVVFVDKLWPAFRPWDMLKILLNW 252
>gi|330506565|ref|YP_004382993.1| di-trans,poly-cis-decaprenylcistransferase [Methanosaeta concilii
GP-6]
gi|328927373|gb|AEB67175.1| di-trans,poly-cis-decaprenylcistransferase [Methanosaeta concilii
GP-6]
Length = 259
Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats.
Identities = 79/239 (33%), Positives = 126/239 (52%), Gaps = 7/239 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + +++ SP +HI II DGN R+A +GL + GH G E + EVG+++LT+
Sbjct: 17 LKSQILAGSPVEHIAIIQDGNRRYARQKGLAKTLGHSLGAETSERVSDWCLEVGVRHLTL 76
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFS N+ R SE + LIK + + N ++VR IG L DD+ ++
Sbjct: 77 YAFSTENFSREDSEKRYIFDLIKKKFNELRNSKKIHFNRVRVRAIGRLEMLPDDLQEEIR 136
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
E+ T+ + L +A Y + E+ A +++ +E G + S D+D ++IA++L D
Sbjct: 137 LTEEATKDYKKMYLNVALAYGGQRELVDAARSLAHLVEEGRIRSKDLDETIIAQHLYPQD 196
Query: 179 ---VPDPDLIIRTGGEKRLSDFLLWQVAYSEF--VFIPEYWPDFSRELFFHALNQYNLR 232
VP DLIIRT G+ R S+FL WQ +E F +WP+F + F A+ R
Sbjct: 197 GISVPKVDLIIRTAGDFRTSNFLPWQANGNECAAYFCAPFWPEFRKIDFLRAIRTAQTR 255
>gi|305432151|ref|ZP_07401317.1| di-trans,poly-cis-decaprenylcistransferase [Campylobacter coli
JV20]
gi|304444816|gb|EFM37463.1| di-trans,poly-cis-decaprenylcistransferase [Campylobacter coli
JV20]
Length = 222
Score = 222 bits (565), Expect = 4e-56, Method: Composition-based stats.
Identities = 75/227 (33%), Positives = 126/227 (55%), Gaps = 9/227 (3%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ ++MDGN RWA A+G G+ +G++ +++ A E GI NL++FAFS NW RP
Sbjct: 5 KHLAVVMDGNRRWAKAKGFLAKLGYSQGVKTMQKLMEACVEEGISNLSLFAFSTENWNRP 64
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
EI + +L+ L + +KNN+++R IG+ LD + + E++T+ L
Sbjct: 65 QDEIEFIFELLDRCLDEALKEFEKNNVRLRAIGDLSRLDTHLQEKIALVEEKTKHCDLLC 124
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+ +A +Y ++DEI R++K + + +++ I+ LD D DL++R G
Sbjct: 125 VNLAISYGAKDEIVRSVKRLIEKGL-------EINEKNISDNLDLPL--DVDLMLRVGNA 175
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
KRLS+FLLWQ AY+E F +P ++ F + ++ R+R FG
Sbjct: 176 KRLSNFLLWQCAYAEIYFSETLFPSLTKREFKKIIKEFRKRERTFGK 222
>gi|91761972|ref|ZP_01263937.1| Putative undecaprenyl diphosphate synthase [Candidatus Pelagibacter
ubique HTCC1002]
gi|91717774|gb|EAS84424.1| Putative undecaprenyl diphosphate synthase [Candidatus Pelagibacter
ubique HTCC1002]
Length = 225
Score = 222 bits (565), Expect = 4e-56, Method: Composition-based stats.
Identities = 85/229 (37%), Positives = 126/229 (55%), Gaps = 7/229 (3%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+P H+ IIMDGNGRW R AGHR G+ + I+ IK LT++ FS NW
Sbjct: 2 NPIKHVAIIMDGNGRWGVKHKQSRNAGHRAGLNTVDLIINHCINHKIKFLTLYTFSSENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+RP +EI L KL+++FL+K + + +IK++ IG L + ++K +E +T
Sbjct: 62 KRPKNEIFFLFKLLENFLQKKISKIIEKDIKLKFIGELNKLPTKLQKLIKLSEKKTFNKK 121
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
L + IA NY S+ E+ IK I Q + + I L T +P+PD++IRT
Sbjct: 122 TLQVNIALNYGSKIELINTIKKIKQKKITIN-------EKNIDNNLYTKHLPNPDILIRT 174
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
G RLS+FLLWQ++Y+E F + WPDF + F +N++ R FG
Sbjct: 175 GNTHRLSNFLLWQLSYTEIFFEKKLWPDFKGKDFDKIMNKFKNIKRNFG 223
>gi|224084084|ref|XP_002307209.1| predicted protein [Populus trichocarpa]
gi|222856658|gb|EEE94205.1| predicted protein [Populus trichocarpa]
Length = 287
Score = 222 bits (565), Expect = 4e-56, Method: Composition-based stats.
Identities = 71/252 (28%), Positives = 107/252 (42%), Gaps = 21/252 (8%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + P+H IMDGN R+A L AGHR G V ++ E+G+ +TI
Sbjct: 24 MFCILSMGPIPNHFAFIMDGNRRYAKKEKLEEGAGHRAGFSVLMSMLKYCYELGVTYVTI 83
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+ LI ++ + K I+V IGN L +
Sbjct: 84 YAFSIENFKRKPDEVQNLMDLILEKIEGLLKEESLVNKYGIRVYFIGNLKLLSKPVRVAA 143
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIE-----------SGSVCSHDVD 166
++ T NT L I Y+S DEI +A+ ++ +
Sbjct: 144 EKVMKATANNTKCVLLICIAYTSCDEIVQAVHESCKNKWEEIQPCNSHKSFSGRVEEKLL 203
Query: 167 SSL-------IAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSR 219
L I ++ S P+PD++IR+ GE RLS+FLLWQ + WPD
Sbjct: 204 VDLSILKVVDIESHMYMSVAPNPDIVIRSSGETRLSNFLLWQTSNCLLYSPNALWPDMRL 263
Query: 220 ELFFHALNQYNL 231
A+ +
Sbjct: 264 WHLVWAVLDFQR 275
>gi|225552268|ref|ZP_03773208.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia sp. SV1]
gi|225371266|gb|EEH00696.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia sp. SV1]
Length = 230
Score = 222 bits (565), Expect = 4e-56, Method: Composition-based stats.
Identities = 88/234 (37%), Positives = 133/234 (56%), Gaps = 4/234 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M S P H+GIIMDGN RWA +GL G+++G++ EIV + VGIK L+ + FS
Sbjct: 1 MNKGSLPSHVGIIMDGNRRWALGKGLSFLEGYKEGLKRAKEIVKYSLRVGIKYLSFYVFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRR EI L+ LI ++L+ F +KN IK+ V G+ SL ++ +K++ +
Sbjct: 61 TENWRRDDCEIENLMFLIANYLRAEFDFYEKNGIKIIVSGDVESLSREVKSSIKDSISFS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ L L +A NY R+EI RA+K S ++ ++ + +LD ++PD DL
Sbjct: 121 KNFNNLILNLAINYGGRNEILRAVKKFV----SSDFDLESLNENIFSSFLDNPELPDLDL 176
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+IRTGG R+S+F LW++AYSE +F WP++ + L + R R FG
Sbjct: 177 LIRTGGNIRISNFFLWRIAYSELIFSNVLWPEYYDTRYSKDLECFQFRRRNFGR 230
>gi|18398467|ref|NP_565420.1| undecaprenyl pyrophosphate synthetase family protein / UPP
synthetase family protein [Arabidopsis thaliana]
gi|84029498|sp|Q8S2T1|DDPS6_ARATH RecName: Full=Dehydrodolichyl diphosphate synthase 6;
Short=Dedol-PP synthase 6
gi|20198261|gb|AAD32914.2| expressed protein [Arabidopsis thaliana]
gi|61742588|gb|AAX55115.1| hypothetical protein At2g17570 [Arabidopsis thaliana]
gi|330251560|gb|AEC06654.1| dehydrodolichyl diphosphate synthase 6 [Arabidopsis thaliana]
Length = 295
Score = 222 bits (565), Expect = 4e-56, Method: Composition-based stats.
Identities = 74/254 (29%), Positives = 119/254 (46%), Gaps = 23/254 (9%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P HI IMDGN R+A GL +GH+ G ++ E+GIK +TI
Sbjct: 30 LFRVISMGPIPCHIAFIMDGNRRYAKKCGLLDGSGHKAGFSALMSMLQYCYELGIKYVTI 89
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI+N+RR E+ ++ L+ +K + + I+V IGN L+D +
Sbjct: 90 YAFSIDNFRRKPEEVESVMDLMLEKIKSLLEKESIVHQYGIRVYFIGNLALLNDQVRAAA 149
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIF----QDIESGSVCSHDVDSSL---- 169
++ T N+ + L I Y+S DEI +A+K +IE+ + D DS +
Sbjct: 150 EKVMKATAKNSRVVLLICIAYNSTDEIVQAVKKSCINKSDNIEASNYKHEDSDSDIEGTD 209
Query: 170 ------------IAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDF 217
I + + S P+PD++IR+ GE RLS+FLLWQ ++ WP+
Sbjct: 210 MENQEKKIQLVDIEENMQMSVAPNPDILIRSSGETRLSNFLLWQTGNTQLCSPAALWPEI 269
Query: 218 SRELFFHALNQYNL 231
A+ +
Sbjct: 270 GLRHLLWAILNFQR 283
>gi|124027955|ref|YP_001013275.1| undecaprenyl pyrophosphate synthetase [Hyperthermus butylicus DSM
5456]
gi|123978649|gb|ABM80930.1| Undecaprenyl pyrophosphate synthetase [Hyperthermus butylicus DSM
5456]
Length = 244
Score = 222 bits (565), Expect = 5e-56, Method: Composition-based stats.
Identities = 80/241 (33%), Positives = 114/241 (47%), Gaps = 9/241 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P HI II DGN RWA +GLP AGH G V + E+G+ +T
Sbjct: 10 LRGKVSRGRLPRHIAIIPDGNRRWARKQGLPVYAGHAAGYRVARRTLDLLWELGVDYVTF 69
Query: 61 FAFSINN-WRRPVSEISELVKLIKSFLKKGFYSLKKNN--IKVRVIGNRLSLDDDILCVL 117
+A S N RRP+ E L KL+ + + N ++V +G+ L + L
Sbjct: 70 YALSRENCLRRPLEEREHLYKLLLRAIDDLLTDPRVVNGSVRVYFVGDFTLLPGQLAERL 129
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+E T N L IA Y R E+ ++++ + D + K +
Sbjct: 130 EEVNAATATNGPNVLTIATCYGGRWEVLETLRSLATKGFVPN------DEEELRKLMPLG 183
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+P+PDL+IRTGGE RLS FLL+ VAY+E F WP+F AL Y +R+RRFG
Sbjct: 184 LLPEPDLLIRTGGELRLSGFLLYHVAYTELYFTRRLWPEFDEFELLRALRSYQMRERRFG 243
Query: 238 G 238
Sbjct: 244 R 244
>gi|193716231|ref|XP_001949834.1| PREDICTED: dehydrodolichyl diphosphate synthase-like [Acyrthosiphon
pisum]
Length = 306
Score = 222 bits (565), Expect = 5e-56, Method: Composition-based stats.
Identities = 70/232 (30%), Positives = 120/232 (51%), Gaps = 3/232 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P H+ IMDG+ + + + KG + E + +GIK +T++AFS
Sbjct: 45 LTYGEIPKHVAFIMDGS--YGEKNCISAQESYAKGFDKLVETLQWCLHLGIKEVTVYAFS 102
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
++N++R EI L + +K+FL + L + + + GN L DD++ + ++ T
Sbjct: 103 LHNFKRTREEIDALFEEVKTFL-EERDRLNELGVCINFFGNIKKLPDDLVKLFAKSMLIT 161
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ N ++L +AF+Y+ DE++ A K I I++ ++ D+ ++ + T P PDL
Sbjct: 162 KQNNKISLNVAFSYTGHDELTNAFKQISHGIKNNNLEESDLSVEILDSCMYTYPSPPPDL 221
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
+IRT GE RLSDF+LWQ +YS F W + + F A+ Y R F
Sbjct: 222 LIRTSGETRLSDFMLWQCSYSYIYFTSVLWSELTAWDFMIAIFMYQRNVRAF 273
>gi|213405209|ref|XP_002173376.1| dehydrodolichyl diphosphate synthase [Schizosaccharomyces japonicus
yFS275]
gi|212001423|gb|EEB07083.1| dehydrodolichyl diphosphate synthase [Schizosaccharomyces japonicus
yFS275]
Length = 265
Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats.
Identities = 76/234 (32%), Positives = 127/234 (54%), Gaps = 4/234 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
MV + SS P HIG +MDGN RWA + GH G E +++ +G+K ++
Sbjct: 25 MVNIIRCSSVPQHIGFVMDGNRRWARQHRMETAEGHSLGFETLKDLLRVCLRLGVKEVSA 84
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKK---GFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
F FS+ N++R E+ ++++ KS L + + + NI++RV+G+ L DD+
Sbjct: 85 FGFSLENFKRSKYEVDMIMEIAKSSLAQICSHGDLVDQYNIRIRVVGDLDRLPDDLHEQF 144
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+ +T NTG L + F Y+SR EI+++++ + + E G + ++D + K L +
Sbjct: 145 VKIMKRTEKNTGATLNLCFPYTSRYEITQSLQRLVKKAEDGRLTPDEIDEKVFEKCLLIT 204
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVA-YSEFVFIPEYWPDFSRELFFHALNQYN 230
D D+++RT G KRLSDF+LWQ ++ F+ YWPDF F + +Y
Sbjct: 205 DSHPLDILVRTSGVKRLSDFMLWQCHENTDIQFVRNYWPDFKVWRFLPMILRYQ 258
>gi|116625349|ref|YP_827505.1| undecaprenyl pyrophosphate synthase [Candidatus Solibacter usitatus
Ellin6076]
gi|116228511|gb|ABJ87220.1| Undecaprenyl pyrophosphate synthetase [Candidatus Solibacter
usitatus Ellin6076]
Length = 236
Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats.
Identities = 92/229 (40%), Positives = 130/229 (56%), Gaps = 15/229 (6%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H GIIMDGNGRWAAARGLPR GHR G+E +V AA + G+ LT+FAFS +NW+RP
Sbjct: 12 HCGIIMDGNGRWAAARGLPRILGHRAGVEAARRVVEAAPDAGVGILTLFAFSSDNWQRPA 71
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
+E+ L++L+ ++L+ + +++ VIG R L + + AE+ T L L
Sbjct: 72 AEVDALMRLMATYLENETARCVQQGVRLEVIGRRDRLGAGLCAAIGRAEEATAGGRRLRL 131
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+A +YS RD I A + + L + + P DL+IRTGGE+
Sbjct: 132 RMAVDYSGRDAILTAARGV---------------RELSRDAFEVAMGPAVDLLIRTGGER 176
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
RLSDFLLW+ AY+E VF WPDF A+ ++ R+RRFG + +
Sbjct: 177 RLSDFLLWESAYAELVFTRTMWPDFGAVDLAAAVQEFQGRERRFGTVPQ 225
>gi|297248469|ref|ZP_06932187.1| di-trans,poly-cis-decaprenylcistransferase [Brucella abortus bv. 5
str. B3196]
gi|297175638|gb|EFH34985.1| di-trans,poly-cis-decaprenylcistransferase [Brucella abortus bv. 5
str. B3196]
Length = 215
Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats.
Identities = 94/197 (47%), Positives = 133/197 (67%)
Query: 47 VAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNR 106
+ AA + G+ LT+FAFS NW RP E+S+L+ L+K F+++ L +NN++V +IG R
Sbjct: 1 MRAAGDRGLGYLTLFAFSSENWTRPSGEVSDLLGLLKLFIRRDLAELHRNNVRVNIIGER 60
Query: 107 LSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVD 166
L +I +L EAE T NTGLNL IAFNY SRDEI RA++++ +D+ +G + +
Sbjct: 61 AELAANIRALLNEAESLTHRNTGLNLVIAFNYGSRDEIVRAVRSLARDVAAGLLDPSSIS 120
Query: 167 SSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHAL 226
+ L++ LDT+ +PDPDLIIRT GE RLS+FLLWQ AYSEF+F+P +WPDF A
Sbjct: 121 AELVSANLDTAGIPDPDLIIRTSGEMRLSNFLLWQAAYSEFLFLPCHWPDFRPADLDAAY 180
Query: 227 NQYNLRDRRFGGLSKKG 243
+ R+RRFGG+ +
Sbjct: 181 ETFRQRERRFGGVEPRA 197
>gi|50285867|ref|XP_445362.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524666|emb|CAG58268.1| unnamed protein product [Candida glabrata]
Length = 274
Score = 221 bits (563), Expect = 8e-56, Method: Composition-based stats.
Identities = 76/230 (33%), Positives = 122/230 (53%), Gaps = 8/230 (3%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+S+ P HIG IMDGN R+A + + GH G ++I+ E G+ T+FAFSI
Sbjct: 23 VSNCVPRHIGFIMDGNRRYAKKKQMESKEGHEAGFRSMSKILELCYEAGVDTATVFAFSI 82
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
N++R E+ ++ L + +++ +K +++RVIG+ LD D+L +K +
Sbjct: 83 ENFKRSAYEVDAIMSLARERIRQIREHGELAQKYGVRIRVIGDISLLDKDLLKEIKNTME 142
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
TR NT L I Y+ R+EI ++K + D S S ++ +I ++L T+ P
Sbjct: 143 LTRNNTRATLNICMPYTGREEIYHSMKTVLDD---DSYSSKNISEEIIDEHLYTAGQPPL 199
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFV--FIPEYWPDFSRELFFHALNQYN 230
DL+IRT G RLSDF+LWQ ++ + FI WP+F L ++
Sbjct: 200 DLLIRTSGVTRLSDFMLWQTCSNDVMIEFIDCLWPEFGPFRMAWILLKFA 249
>gi|302759661|ref|XP_002963253.1| hypothetical protein SELMODRAFT_79880 [Selaginella moellendorffii]
gi|300168521|gb|EFJ35124.1| hypothetical protein SELMODRAFT_79880 [Selaginella moellendorffii]
Length = 253
Score = 221 bits (563), Expect = 8e-56, Method: Composition-based stats.
Identities = 79/246 (32%), Positives = 133/246 (54%), Gaps = 9/246 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVF----NEIVAAAAEVGIK 56
+ A + P+H+ +IMDGN RWA RG+ + R E EIV +++ GIK
Sbjct: 3 LPAEVDPLRLPNHVAMIMDGNSRWAQVRGIAKERQLRAAAEACYSNAREIVRLSSDWGIK 62
Query: 57 NLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYS-LKKNNIKVRVIGNRLSLDDDILC 115
LT+FAFS N+ RP E+ + ++ + L + + + I+ IG+ L +
Sbjct: 63 ALTLFAFSTENFLRPREEVDQWMQQLDRVLSLDDPATILLDGIQFHCIGDTARLPRPLQA 122
Query: 116 VLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD 175
+ +A+ T NTG+ L +A Y ++ + + + +++E G + ++D +AK L
Sbjct: 123 KISDAQSITSGNTGMKLVMAIGYGGHSDLVQTCQALAREVEQGKMAVEEIDQINLAKRLM 182
Query: 176 TSDVPD----PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
+ + P+L++RT GE+RLS+F+LW +AYSE VF + WPDF E + +AL ++
Sbjct: 183 LGERCEDVGAPELLVRTSGEQRLSNFMLWHLAYSELVFEKKLWPDFGEEEYKNALVEFQG 242
Query: 232 RDRRFG 237
R R FG
Sbjct: 243 RMRTFG 248
>gi|160286204|pdb|2VG1|A Chain A, Rv1086 E,E-Farnesyl Diphosphate Complex
gi|160286205|pdb|2VG1|B Chain B, Rv1086 E,E-Farnesyl Diphosphate Complex
Length = 228
Score = 221 bits (563), Expect = 8e-56, Method: Composition-based stats.
Identities = 74/230 (32%), Positives = 115/230 (50%), Gaps = 7/230 (3%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S P HI ++ DGN RWA + G G+R G E++ E GI+ T++ S
Sbjct: 1 SDLPRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWCHEAGIELATVYLLSTE 60
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
N +R E++ L+++I +++ N+ VR +G+ + ++ L+ A + T
Sbjct: 61 NLQRDPDELAALIEIITDVVEE--ICAPANHWSVRTVGDLGLIGEEPARRLRGAVESTPE 118
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSDVPDP 182
++ +A Y R EI A++ + + + + V I++ L TS PDP
Sbjct: 119 VASFHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVDAVTVEGISENLYTSGQPDP 178
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLR 232
DL+IRT GE+RLS FLLWQ AYSE F +WP F F AL Y+ R
Sbjct: 179 DLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDFLRALRDYSAR 228
>gi|303288207|ref|XP_003063392.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455224|gb|EEH52528.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 228
Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats.
Identities = 86/225 (38%), Positives = 129/225 (57%), Gaps = 5/225 (2%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGN RWA+ARGL GH +G+E E+V A I +T+FAFS NWRR E+
Sbjct: 1 MDGNARWASARGLAPSIGHERGVEALREVVRCCAAWEIPAMTVFAFSHENWRRSREEVEH 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ L++ L+ +L K N++V V+G+ ++DD+ +++A D T N GL L +A +
Sbjct: 61 LMALLRDCLRDELPTLTKENVRVCVMGDLGMVEDDLRRAVRDAIDATSNNDGLRLCVALS 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS-----DVPDPDLIIRTGGEK 192
Y R +I A + I + +G + ++ A+ L + V +PDL+IRT GE+
Sbjct: 121 YGGRQDIVAATRAIAAEASAGLLDPSEITERTFAERLASGRALPERVREPDLVIRTSGEQ 180
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RLS+FLLW+ AY+E F + WP+F A+ +Y R RRFG
Sbjct: 181 RLSNFLLWESAYAELYFCEKTWPEFDEAALRDAMGEYARRSRRFG 225
>gi|23491567|dbj|BAC16756.1| cis-prenyltransferase [Periploca sepium]
Length = 331
Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats.
Identities = 82/267 (30%), Positives = 122/267 (45%), Gaps = 27/267 (10%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+V+ + P HI IMDGN R+A + L GHR G ++ E+GIK +TI
Sbjct: 22 IVSIVSVGPIPVHIAFIMDGNRRYAKKKNLLEGTGHRFGYLALINMLKCCYELGIKYVTI 81
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI+N++R E+ +KLI+ +++ L ++V +GN L+ +
Sbjct: 82 YAFSIDNFKRRPEEVESTMKLIQEKIEELIKEESLLNIYGVRVYFLGNLKLLNKSVRLTA 141
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIES-------------------- 157
+ A T N+ L I Y+S DEI A++ +
Sbjct: 142 ERAMAATAGNSKAVLSICVGYTSTDEIVHAVQECCERKWDEIRELDSSGAGYGLISIGTN 201
Query: 158 -GSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPD 216
S + V + I K++ + VPDPD+IIRT GE RLS+FLLWQ A S WP+
Sbjct: 202 EESKGENIVGVADIEKHMYAAVVPDPDIIIRTSGETRLSNFLLWQSADSLLYSPSILWPE 261
Query: 217 FSRELFFHALNQYNLRDRRFGGLSKKG 243
A+ + R F L KKG
Sbjct: 262 IGFRHLVWAVLDFQ---RNFHYLKKKG 285
>gi|154151602|ref|YP_001405220.1| undecaprenyl diphosphate synthase [Candidatus Methanoregula boonei
6A8]
gi|154000154|gb|ABS56577.1| undecaprenyl diphosphate synthase [Methanoregula boonei 6A8]
Length = 255
Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats.
Identities = 76/233 (32%), Positives = 118/233 (50%), Gaps = 5/233 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M + P H+ II DGN R+A G+ GHR G + E++ A E+GI+ +TI++FS
Sbjct: 17 MQCTQIPTHVAIIQDGNRRFAKEIGIDTAQGHRAGADKTEEMLDWAHELGIRFVTIYSFS 76
Query: 65 INNWRRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
N+ R EI EL +L K + + I+V+++G+R L +D+ ++ AE+
Sbjct: 77 TENFHRTEEEIRELFRLFKEKFISTISDERVHRYKIRVQMLGDRSLLPEDLRAAVEAAEE 136
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT-SDVPD 181
T+ G L +A Y R+EI A + I + G + +D ++ +L ++P
Sbjct: 137 ATKDYDGFTLNVALAYGGRNEIVLAAREIVSAVREGKIAPDTIDQKMVESHLHEGKEIPP 196
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSE--FVFIPEYWPDFSRELFFHALNQYNLR 232
DLIIRTG E R S+FL W E F YWP F + A+ Y+ R
Sbjct: 197 VDLIIRTGNEYRTSNFLPWLANGHESAVYFCAPYWPLFRKIDLLRAIRIYDQR 249
>gi|182435784|ref|YP_001823503.1| putative undecaprenyl pyrophosphate synthetase [Streptomyces
griseus subsp. griseus NBRC 13350]
gi|178464300|dbj|BAG18820.1| putative undecaprenyl pyrophosphate synthetase [Streptomyces
griseus subsp. griseus NBRC 13350]
Length = 260
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 76/243 (31%), Positives = 120/243 (49%), Gaps = 7/243 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ A+++ P H+GI++DGN RWA G G+R G + GI+++T
Sbjct: 20 LAATLVGLPRPQHVGIMVDGNRRWARKAGHTDVREGYRAGGAKVTTFLGWCTAAGIEHVT 79
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
+F S +N RP E+ L+++I+ ++ + ++ IG+ L V KE
Sbjct: 80 LFMLSDDNLGRPAEELGPLIEVIEETVRDITAEGRDWEVR--AIGSLDMLPAASARVFKE 137
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVD----SSLIAKYLD 175
A T GL + +A Y R EI A+++ F++ + ++ I+++L
Sbjct: 138 ATAATAGRGGLKVDVAVGYGGRREIVDAVRSAFEEHIAAGGDPAELAARFGIDDISRHLY 197
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
+ D IIRT GE+RLS FLLWQ AY+E ++ YWP F F AL Y R+RR
Sbjct: 198 SPVSDHTDFIIRTSGEQRLSGFLLWQSAYAEMHWVDCYWPAFRHVDFLRALRSYANRERR 257
Query: 236 FGG 238
FG
Sbjct: 258 FGK 260
>gi|50550943|ref|XP_502945.1| YALI0D17556p [Yarrowia lipolytica]
gi|49648813|emb|CAG81137.1| YALI0D17556p [Yarrowia lipolytica]
Length = 337
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 74/251 (29%), Positives = 124/251 (49%), Gaps = 21/251 (8%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+V + + P H+ IMDGN R+A L GH G E+ +++ +GI +TI
Sbjct: 23 LVRVLRTGPVPRHVAFIMDGNRRFAKTNNLELREGHVAGTELLLKLLEVCFRMGINTVTI 82
Query: 61 FAFSINNWRRPVSEISELVKLIKS---FLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N+ RP E L LI++ L ++ + ++++GNR + +DIL ++
Sbjct: 83 YAFSIENFNRPKVETDALFDLIRNNIVVLGSKDEMAERYGLAIKILGNRDLIPEDILELI 142
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSH-------------- 163
E+ T+ N L I F Y+SRD+I++AI+ + D+ + + +
Sbjct: 143 VRVEETTKDNKRGTLNICFPYTSRDDIAQAIQKVVTDVFADTKQAPPPKSFGPPSSTSRP 202
Query: 164 ---DVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVA-YSEFVFIPEYWPDFSR 219
V ++ K + T + P D++IRT G RLSDF+LWQ F+ WPDF
Sbjct: 203 SPLHVTEKMLEKAMYTGESPPLDIMIRTSGVTRLSDFMLWQSHKNCTLEFVDTLWPDFGV 262
Query: 220 ELFFHALNQYN 230
+ L +++
Sbjct: 263 RELYRLLLKWS 273
>gi|145354782|ref|XP_001421655.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581893|gb|ABO99948.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 311
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 74/240 (30%), Positives = 129/240 (53%), Gaps = 10/240 (4%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ ++ + P H+ +IMDGN R+A A G+ GH +G +V E A E+G++ L++
Sbjct: 28 IARALRAGPIPRHVAVIMDGNRRFACASGVALARGHARGADVLREACAWCFELGVETLSV 87
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVLK 118
+A S N++R E+ L L + L+ +V V G+ +L + K
Sbjct: 88 YALSTENFKRSERELEALFDLACGEIGTLIDDEGLRLREARVHVSGDLDALPKRVRDKAK 147
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
EA ++T+ N G L + Y+ R++I+RA+ +D+ G++ + +VD +A L ++
Sbjct: 148 EAMEKTKDNRGPMLNVCMAYTGREDIARAVMKTREDVRGGALDASEVDERAVASRLHGAE 207
Query: 179 --------VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
+P+ DL++RT GE RLSDF+L+ +++ VF+ WPDF+ F HA+ QY
Sbjct: 208 REIELGAGMPEVDLLVRTSGETRLSDFMLFNARFAKLVFVEVLWPDFTFMDFVHAVWQYQ 267
>gi|160286196|pdb|2VFW|A Chain A, Rv1086 Native
gi|160286197|pdb|2VFW|B Chain B, Rv1086 Native
gi|160286201|pdb|2VG0|A Chain A, Rv1086 Citronelly Pyrophosphate Complex
gi|160286202|pdb|2VG0|B Chain B, Rv1086 Citronelly Pyrophosphate Complex
Length = 227
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 73/228 (32%), Positives = 114/228 (50%), Gaps = 7/228 (3%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HI ++ DGN RWA + G G+R G E++ E GI+ T++ S N
Sbjct: 2 LPRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWCHEAGIELATVYLLSTENL 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
+R E++ L+++I +++ N+ VR +G+ + ++ L+ A + T
Sbjct: 62 QRDPDELAALIEIITDVVEE--ICAPANHWSVRTVGDLGLIGEEPARRLRGAVESTPEVA 119
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSDVPDPDL 184
++ +A Y R EI A++ + + + + V I++ L TS PDPDL
Sbjct: 120 SFHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVDAVTVEGISENLYTSGQPDPDL 179
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLR 232
+IRT GE+RLS FLLWQ AYSE F +WP F F AL Y+ R
Sbjct: 180 VIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDFLRALRDYSAR 227
>gi|116753902|ref|YP_843020.1| undecaprenyl diphosphate synthase [Methanosaeta thermophila PT]
gi|116665353|gb|ABK14380.1| Undecaprenyl pyrophosphate synthetase [Methanosaeta thermophila PT]
Length = 264
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 80/242 (33%), Positives = 122/242 (50%), Gaps = 10/242 (4%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + +H+ +I DGN R+A +P GHR G + +I E+GIK+LT+
Sbjct: 19 LKQQLARGPRVEHVAVIQDGNRRYANRHNMPVSNGHRLGAKTTEKISDWCLELGIKHLTV 78
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+AFS N+ R E + LI L + + KN ++VR IG L + + +K
Sbjct: 79 YAFSTENFSRSEPEKRYIFNLITEKLLELCSSEKIHKNRVRVRAIGRIDMLPEYLQNAIK 138
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD-TS 177
E E T + + L +A Y + E+ A + + +D+ +G + D+D L+ +YL T+
Sbjct: 139 EVEAATEGYSQMYLNVALAYGGQYELIDATRAMARDLRAGVIRISDLDEDLVGRYLYPTT 198
Query: 178 DVPDP--DLIIRTGGEKRLSDFLLWQVAYSEF--VFIPEYWPDFSRELFFHALN---QYN 230
+ P P DLIIRTGGE R S+FL WQ SE F YWP+F + F A+ Y
Sbjct: 199 ETPVPKVDLIIRTGGEIRTSNFLPWQANGSECAAYFCAPYWPEFRKIDFLRAIRTAQSYA 258
Query: 231 LR 232
R
Sbjct: 259 FR 260
>gi|56807544|ref|ZP_00365467.1| COG0020: Undecaprenyl pyrophosphate synthase [Streptococcus
pyogenes M49 591]
Length = 187
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 86/187 (45%), Positives = 111/187 (59%), Gaps = 4/187 (2%)
Query: 57 NLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCV 116
LT++AFS NW RP E+S ++ L +F K L +NN+K+++IG L +D L
Sbjct: 1 VLTVYAFSTENWSRPQDEVSFIMNLPVTFFDKYVPVLHENNVKIQMIGETSRLPEDTLAA 60
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT 176
L A D+T+ NTGL L A NY R EI+ A++ I QD+ + D+ LIA YL T
Sbjct: 61 LNAAIDKTKRNTGLILNFALNYGGRAEITSAVRFIAQDVLDAKLNPGDITEDLIANYLMT 120
Query: 177 SDVP----DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLR 232
+P DPDLIIRT GE RLS+FL WQ AYSEF F P WPDF + A+ YN R
Sbjct: 121 DHLPYLYRDPDLIIRTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKAELLKAIADYNRR 180
Query: 233 DRRFGGL 239
RRFG +
Sbjct: 181 QRRFGKV 187
>gi|297832372|ref|XP_002884068.1| undecaprenyl pyrophosphate synthetase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297329908|gb|EFH60327.1| undecaprenyl pyrophosphate synthetase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 296
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 70/255 (27%), Positives = 112/255 (43%), Gaps = 24/255 (9%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P H+ IMDGN R+A L +GH+ G ++ E+GIK +TI
Sbjct: 30 LFRVISMGPIPSHLAFIMDGNRRYAKKHSLEDGSGHQAGFSALMSMLQYCYELGIKYVTI 89
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI+N+RR E+ L+ L+ +K + + I+V IGN L+D +
Sbjct: 90 YAFSIDNFRRKPEEVQSLMDLMLEKIKSLLEKESIVHQYGIRVYFIGNLALLNDQVRAAA 149
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIF------------QDIESGSVCSHDV 165
++ T N+ + L I Y+S DEI +A+K E
Sbjct: 150 EKVMKATAKNSRVVLLICIAYNSTDEIVQAVKKSCINTSDNIEASGNYKHEDRDSDIEGT 209
Query: 166 DSSL---------IAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPD 216
D I + + S PDPD+++R+ GE RLS+FLLWQ ++ WP+
Sbjct: 210 DMENQEKRIQLVDIEENMRMSVAPDPDILVRSSGETRLSNFLLWQTGNTQLFSPAALWPE 269
Query: 217 FSRELFFHALNQYNL 231
+ A+ +
Sbjct: 270 IGLKHLLWAVLNFQR 284
>gi|326776409|ref|ZP_08235674.1| undecaprenyl diphosphate synthase [Streptomyces cf. griseus
XylebKG-1]
gi|326656742|gb|EGE41588.1| undecaprenyl diphosphate synthase [Streptomyces cf. griseus
XylebKG-1]
Length = 260
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 76/243 (31%), Positives = 120/243 (49%), Gaps = 7/243 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ A+++ P H+GI++DGN RWA G G+R G + GI+++T
Sbjct: 20 LAATLVGLPRPQHVGIMVDGNRRWARKAGHTDVREGYRAGGAKVTTFLGWCTAAGIEHVT 79
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
+F S +N RP E+ L+++I+ ++ + ++ IG+ L V KE
Sbjct: 80 LFMLSDDNLGRPAEELGPLIEVIEETVRDITAEGRDWEVR--AIGSLDMLPAASARVFKE 137
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVD----SSLIAKYLD 175
A T GL + +A Y R EI A+++ F++ + ++ I+++L
Sbjct: 138 ATAATAGRGGLKVDVAVGYGGRREIVDAVRSAFEEHIAAGGDPAELAARFGIDDISRHLY 197
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
+ D IIRT GE+RLS FLLWQ AY+E ++ YWP F F AL Y R+RR
Sbjct: 198 SPVADHTDFIIRTSGEQRLSGFLLWQSAYAEMHWVDCYWPAFRHVDFLRALRSYANRERR 257
Query: 236 FGG 238
FG
Sbjct: 258 FGK 260
>gi|170584842|ref|XP_001897201.1| Undecaprenyl diphosphate synthase family protein [Brugia malayi]
gi|158595391|gb|EDP33948.1| Undecaprenyl diphosphate synthase family protein [Brugia malayi]
Length = 322
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 75/254 (29%), Positives = 121/254 (47%), Gaps = 27/254 (10%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAA-ARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P+HI IMDGN R+A R GHRKG + +++ E G+K +T++A
Sbjct: 22 LTLGPIPEHIAFIMDGNRRYARRQRYSSFAEGHRKGFDKLTKVMQWCREFGVKEVTVYAL 81
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYS--------------------------LKKNN 97
S+ N++R +E+ +L+ L + L + L +N
Sbjct: 82 SLENFKRSRTEVDDLMTLFEHKLLQLLDESLVLPHIKLKTFFVSSMCIICANQDKLTENG 141
Query: 98 IKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIES 157
I+++ GN L + + + E TR + + + Y+S+DE+ RA I I+
Sbjct: 142 IRIQFFGNLKHLPRKLQQYMAKIELLTREHNSGTVNVCIAYTSQDELRRAFVTIAHGIQK 201
Query: 158 GSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDF 217
G + + D++ LI++ LD+ DPDL+IRT GE RLSDFLLWQ + + F WP+F
Sbjct: 202 GLLTTTDINECLISRCLDSRFSRDPDLLIRTSGETRLSDFLLWQCSKCQIYFDGVLWPNF 261
Query: 218 SRELFFHALNQYNL 231
A+ Y
Sbjct: 262 DYWNLCKAIYFYQQ 275
>gi|315616342|gb|EFU96960.1| di-trans,poly-cis-decaprenylcistransferase [Escherichia coli 3431]
Length = 231
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 71/221 (32%), Positives = 120/221 (54%), Gaps = 14/221 (6%)
Query: 6 MSSSPP----DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+S P H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++
Sbjct: 8 LSEKLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY 67
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW RP E+S L++L L SL ++N+++R+IG+ + + ++++E
Sbjct: 68 AFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSE 127
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T NTGL L IA NY R +I + ++ + + ++ G++ +D ++ +++ ++
Sbjct: 128 ALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAP 187
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELF 222
DL+IRTGG +A F F P+F+ ++F
Sbjct: 188 VDLVIRTGG----------SIALVTFCFGKLPMPNFTLQMF 218
>gi|284166508|ref|YP_003404787.1| undecaprenyl diphosphate synthase [Haloterrigena turkmenica DSM
5511]
gi|284016163|gb|ADB62114.1| undecaprenyl diphosphate synthase [Haloterrigena turkmenica DSM
5511]
Length = 318
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 70/229 (30%), Positives = 115/229 (50%), Gaps = 4/229 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P H+ +I DGN R+A +G GHR+G + ++ ++G++ LT++ FS N
Sbjct: 22 SGAPTHVAVIQDGNRRYARRKGDDAPEGHREGAQTTERVLEWCQDIGVEELTLYTFSTEN 81
Query: 68 WRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
+ RP E +L L++ L + + N +++R +G+ L + + + AE +TR
Sbjct: 82 FDRPDEENEQLFDLLERKLHEFGDADRVHDNGVRIRALGDVDRLPERVREAVDYAERRTR 141
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
L IA Y R ++ A + + D+E+ + ++D I L V D DLI
Sbjct: 142 GYDQFVLNIALAYGGRSQLLEAARGVATDVENERLEPDEIDVETIEDRLYERPVRDVDLI 201
Query: 186 IRTGGEKRLSDFLLWQVAYSE--FVFIPEYWPDFSRELFFHALNQYNLR 232
IRTGG++R S+FL W +E F YWP+FS+ F + Y R
Sbjct: 202 IRTGGDERTSNFLPWHANGNEAAVFFCTPYWPEFSKTDFLRGIRTYEHR 250
>gi|302819586|ref|XP_002991463.1| hypothetical protein SELMODRAFT_236294 [Selaginella moellendorffii]
gi|300140856|gb|EFJ07575.1| hypothetical protein SELMODRAFT_236294 [Selaginella moellendorffii]
Length = 254
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 80/243 (32%), Positives = 133/243 (54%), Gaps = 9/243 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P H+ +I DGN RW A GL KG+ V +I + + GI+ LT
Sbjct: 13 LPLQLDPKRLPRHVAVIPDGNVRWTKANGLSA----YKGLSVLRDIARISNQWGIEVLTA 68
Query: 61 FAFSINNWRRPVSEISE-LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
FAFS +N++RP +E+ L L F ++ K+ +KVR IG+ L + + E
Sbjct: 69 FAFSTDNFKRPKAEVEFVLEHLDNMFTLDHPNTVLKDGLKVRCIGDMSKLPRSLQAKISE 128
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT--- 176
A + TR + L +A Y +++ +A + I ++E G V ++D+D + K +
Sbjct: 129 AHEMTRDSKDLKFILAIAYGGWEDVLQACQRIASEVEQGVVKANDIDQCYLRKKMLLTEW 188
Query: 177 -SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
+V DPDL+IRT GE+RLS++L+ ++Y+E VF + WPDF+ E + A+ ++ R+RR
Sbjct: 189 DEEVGDPDLLIRTSGEQRLSNYLMNNLSYTELVFTEKLWPDFNEEDYVKAVVEFQERNRR 248
Query: 236 FGG 238
+G
Sbjct: 249 YGR 251
>gi|110669210|ref|YP_659021.1| di-trans,poly-cis-decaprenylcistransferase [Haloquadratum walsbyi
DSM 16790]
gi|109626957|emb|CAJ53429.1| di-trans,poly-cis-decaprenylcistransferase [Haloquadratum walsbyi
DSM 16790]
Length = 317
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 76/227 (33%), Positives = 119/227 (52%), Gaps = 4/227 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ II DGN R+A +G GHR+G + ++ E+GI+ LT++AFS N+ R
Sbjct: 27 PTHVAIIQDGNRRYAREQGNDAHEGHREGAQTTERVLEWCEELGIEELTLYAFSTENFTR 86
Query: 71 PVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
P +E+ L LI+S L + +N++++ IG+ L + ++ AE QT
Sbjct: 87 PDAELQPLFDLIESKLYEFADAERTHENSVRIGAIGDIDRLPQRVQSAVEYAESQTAAYD 146
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
L IA Y R E+ RA +++ D+++G + VD+ + L D DLI+RT
Sbjct: 147 DFRLNIALAYGGRSELLRAARSVAHDVDAGELDPSTVDAETVECRLSRHTTRDVDLIVRT 206
Query: 189 GGEKRLSDFLLWQVAYSE--FVFIPEYWPDFSRELFFHALNQYNLRD 233
GG++R S+FL W +E F YWP+FS+ F L Y R+
Sbjct: 207 GGDERTSNFLPWHANGNEAAVYFCAPYWPEFSKIDFLRGLRTYESRE 253
>gi|71993029|ref|NP_001023351.1| hypothetical protein T01G1.4 [Caenorhabditis elegans]
gi|58081826|emb|CAI46583.1| C. elegans protein T01G1.4, confirmed by transcript evidence
[Caenorhabditis elegans]
Length = 299
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 76/231 (32%), Positives = 118/231 (51%), Gaps = 5/231 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGL-PRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ S P H+ +MDGN R+A + L GH KG +I+ GI+ +T++AF
Sbjct: 31 IASGPIPRHVAFVMDGNRRFAKTKHLGNVIKGHEKGFTQLAKILDWCNRFGIREITVYAF 90
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
SI N++R E+S L++L + +K L + I R GNR L + ++ +
Sbjct: 91 SIENFKRSEEEVSGLMRLAEEKFQKLLNDSEKLDEKRICFRFYGNRSLLSSRLQKLMSDI 150
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT-SDV 179
E +T G L + Y+SRDEI+R+ + I + ++ G V +++ S+I LD+
Sbjct: 151 EHRTENFDGGRLNVCMPYTSRDEIARSFETIRKHVKDGKVNVDEINESMIDACLDSGCGG 210
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
PDL IRT GE RLSDFL+WQ + + F WP+F A+ Y
Sbjct: 211 TSPDLFIRTSGEHRLSDFLMWQASETHVYFDDVLWPEFGYFNLCKAILNYQ 261
>gi|325923974|ref|ZP_08185563.1| Undecaprenyl pyrophosphate synthetase [Xanthomonas gardneri ATCC
19865]
gi|325545557|gb|EGD16822.1| Undecaprenyl pyrophosphate synthetase [Xanthomonas gardneri ATCC
19865]
Length = 221
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 77/208 (37%), Positives = 117/208 (56%)
Query: 35 GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLK 94
GHR G N + E G+ LT+FAFS NW RP E+ L+KL L + L+
Sbjct: 3 GHRAGARAVNRTIDFCLEKGVSALTLFAFSSENWGRPQEEVDALMKLFLHALDREVDELQ 62
Query: 95 KNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQD 154
+ ++VR IG+R + + AE T N+ L L IA +Y R +I+ A + + ++
Sbjct: 63 RRGVQVRFIGDRSRFAAPLRERMAGAERITAANSRLVLSIAASYGGRQDIALAARALAEE 122
Query: 155 IESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYW 214
+ +G + +D +L+A + +D+P PDL IRTGG+ R+S+FLLWQ+AY+E F W
Sbjct: 123 VAAGRLQPQQIDEALLASRIALADLPAPDLFIRTGGDTRISNFLLWQLAYTELWFTETLW 182
Query: 215 PDFSRELFFHALNQYNLRDRRFGGLSKK 242
P+F + AL+ Y R+RRFG S +
Sbjct: 183 PEFDAAVLQQALDDYAGRERRFGLTSAQ 210
>gi|330814010|ref|YP_004358249.1| undecaprenyl pyrophosphate synthetase [Candidatus Pelagibacter sp.
IMCC9063]
gi|327487105|gb|AEA81510.1| undecaprenyl pyrophosphate synthetase [Candidatus Pelagibacter sp.
IMCC9063]
Length = 217
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 84/220 (38%), Positives = 131/220 (59%), Gaps = 7/220 (3%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA R PR GH++G++ + ++ A + IK LT+F FS++NW+R E++
Sbjct: 1 MDGNGRWALKRNKPRNFGHQEGLKNISSLIDFAKKNKIKFLTLFVFSLDNWKRSKREVNF 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L L++ FL K L K IK++ IG R +L ++ +K+ E + +N + + +AFN
Sbjct: 61 LFNLLEKFLDKNINELIKKKIKIKSIGERKNLSKKLINKIKKVEKLSSVNYDITVNLAFN 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
YSS+ EI ++K + + I L T ++PDP+L+IRTGG+ RLSDF
Sbjct: 121 YSSKTEIIESLKKSIKQKA-------KITVDTIKNNLYTKNIPDPELLIRTGGKNRLSDF 173
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+LWQ++Y+E F+ + WPDF++ F L +Y R FG
Sbjct: 174 MLWQMSYTEIFFLNKLWPDFNKNDFKKILREYQKIKRNFG 213
>gi|284034435|ref|YP_003384366.1| undecaprenyl diphosphate synthase [Kribbella flavida DSM 17836]
gi|283813728|gb|ADB35567.1| undecaprenyl diphosphate synthase [Kribbella flavida DSM 17836]
Length = 261
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 78/242 (32%), Positives = 118/242 (48%), Gaps = 8/242 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLP-RCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ ++ P H+G++MDGN RWA +G GHR G + G++++T
Sbjct: 21 LRRQLVGKPRPQHVGLVMDGNRRWARGQGHANPSVGHRYGALHVENALGWCEAAGVRHVT 80
Query: 60 IFAFSINNW-RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+F S N +R E++ L+ LI+ + + +V V G L LK
Sbjct: 81 VFVCSTENLRKRGDVEVAYLMSLIEEVVAQRLSE-PDGRWQVHVAGLLDLLPASTAQALK 139
Query: 119 EAEDQTRLN-TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL----IAKY 173
EA + T TG ++ +A Y R E+ A++++ + + V +L I K+
Sbjct: 140 EAVEATEKCATGNHVTLAIGYGGRQEVVEAVRSLLESEAAAGNDLDGVAETLEIEDITKH 199
Query: 174 LDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
L T+ PDPDLIIRT GE+R+S+FLLWQ A++E F YWP F F AL Y R
Sbjct: 200 LYTAGRPDPDLIIRTSGEQRMSNFLLWQSAHAELYFCDPYWPAFREIDFLRALRSYADRR 259
Query: 234 RR 235
R
Sbjct: 260 AR 261
>gi|194763633|ref|XP_001963937.1| GF20994 [Drosophila ananassae]
gi|190618862|gb|EDV34386.1| GF20994 [Drosophila ananassae]
Length = 300
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 74/230 (32%), Positives = 123/230 (53%), Gaps = 5/230 (2%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
P H+ +MDGN R+A ++ + + GH +G + + ++G++ +T FAFSI N
Sbjct: 24 GHIPHHVAFVMDGNRRFARSQQIDKIEGHSRGFAKLADCLRWCLDIGVREVTTFAFSIEN 83
Query: 68 WRRPVSEISELVKLIKSFLKK---GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
++R E+ L L + + L ++ I++R+IGN L D+ ++ A T
Sbjct: 84 FKRSSEEVEGLFNLAREKFARLLEETERLNEHGIRIRIIGNIGLLPQDLQKLVATAMLST 143
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N L L +AF Y+SRDEI++A++ + + S + D++ L+ + L T P PDL
Sbjct: 144 EQNDKLFLNVAFAYTSRDEITQAVETVLR-HSSDDLRPEDINERLMEECLYTRHSPPPDL 202
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
+ RT GE RLSDF++WQ++ S F WP + F ++ Y RDR
Sbjct: 203 VFRTSGETRLSDFMMWQLSTSVLYFSNVLWPQITFWHFLASILAYQ-RDR 251
>gi|20336659|gb|AAM19345.1|AF499435_1 hypothetical protein [Arabidopsis thaliana]
Length = 295
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 74/254 (29%), Positives = 118/254 (46%), Gaps = 23/254 (9%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P HI IMDGN R+A GL +GH+ G ++ E+GIK +TI
Sbjct: 30 LFRVISMGPIPCHIAFIMDGNRRYAKKCGLLDGSGHKAGFSALMSMLQYCYELGIKYVTI 89
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI+N+RR E ++ L+ +K + + I+V IGN L+D +
Sbjct: 90 YAFSIDNFRRKPEEXESVMDLMLEKIKSLLEKESIVHQYGIRVYFIGNLALLNDQVRAAA 149
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIF----QDIESGSVCSHDVDSSL---- 169
++ T N+ + L I Y+S DEI +A+K +IE+ + D DS +
Sbjct: 150 EKVMKATAKNSRVVLLICIAYNSTDEIVQAVKKSCINKSDNIEASNYKHEDSDSDIEGTD 209
Query: 170 ------------IAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDF 217
I + + S P+PD++IR+ GE RLS+FLLWQ ++ WP+
Sbjct: 210 MENQEKKIQLVDIEENMQMSVAPNPDILIRSSGETRLSNFLLWQTGNTQLCSPAALWPEI 269
Query: 218 SRELFFHALNQYNL 231
A+ +
Sbjct: 270 GLRHLLWAILNFQR 283
>gi|307352897|ref|YP_003893948.1| undecaprenyl diphosphate synthase [Methanoplanus petrolearius DSM
11571]
gi|307156130|gb|ADN35510.1| undecaprenyl diphosphate synthase [Methanoplanus petrolearius DSM
11571]
Length = 257
Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 77/228 (33%), Positives = 122/228 (53%), Gaps = 5/228 (2%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
PDHI II DGN R+A RG+ GHR G E N ++ A ++G+++LT++ FS N+
Sbjct: 23 IPDHIAIIQDGNRRYAKERGIDVAIGHRMGAEKTNMVLEWARDIGVRHLTLYCFSTENFN 82
Query: 70 RPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
R E +EL KL + + +N I+ +++G+R + +D+L +++ E+ T+
Sbjct: 83 RSEYEQNELFKLFTEKAMETLEDERVHENRIRFQMVGDRDLVPEDLLKRIEKVEEVTKNY 142
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS-DVPDPDLII 186
+ +A Y R+EI A K+I DIE G + D+ LI +L ++P DLII
Sbjct: 143 NNFTINLALAYGGRNEILHATKSILNDIERGVLTPEDITEDLINAHLYHGMNIPPVDLII 202
Query: 187 RTGGEKRLSDFLLWQVAYSE--FVFIPEYWPDFSRELFFHALNQYNLR 232
RTG +KR S+FL W +E F YWP F + + ++ R
Sbjct: 203 RTGDDKRTSNFLPWLANGNESAVYFCAPYWPVFRKIDLLRGIRVFSNR 250
>gi|255514170|gb|EET90432.1| undecaprenyl diphosphate synthase [Candidatus Micrarchaeum
acidiphilum ARMAN-2]
Length = 238
Score = 219 bits (557), Expect = 4e-55, Method: Composition-based stats.
Identities = 84/234 (35%), Positives = 119/234 (50%), Gaps = 4/234 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+ P+++G+I DGN RWA + G+ GI F + + G K LT++A S N
Sbjct: 6 EAIPENVGLIPDGNRRWAKTHKMDLLRGYDAGINKFLDFSLWLRDFGAKTLTVWALSTEN 65
Query: 68 WR-RPVSEISELVKLIKSFLK--KGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
+ R +E++ L KL K + ++ N +K+RVIGN L D + LK E T
Sbjct: 66 IKNRKKNELNALYKLYIKTTKDKRALGIIRDNKVKIRVIGNMNLLPDKVRNALKGLEHDT 125
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
R N G + + Y RD+I A K + V+ ++ L T VPDPDL
Sbjct: 126 RNNKGFKINLLIGYGGRDDIIYAFKKFYAHAMKIGRRI-AVNEDVLRSSLRTYAVPDPDL 184
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+IRT GE RLS FL WQ AYSE F +YWP+F + AL ++ R RR+G
Sbjct: 185 VIRTSGEMRLSGFLPWQTAYSELYFAEKYWPEFQIDDLKKALTEFQKRKRRYGK 238
>gi|239990965|ref|ZP_04711629.1| putative undecaprenyl pyrophosphate synthetase [Streptomyces
roseosporus NRRL 11379]
Length = 260
Score = 219 bits (557), Expect = 4e-55, Method: Composition-based stats.
Identities = 78/243 (32%), Positives = 121/243 (49%), Gaps = 7/243 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ A+++ P H+GI++DGN RWA G G+R G + GI+++T
Sbjct: 20 LAATLVGLPRPQHVGIMVDGNRRWARKAGHTDVREGYRAGGAKVTTFLGWCTAAGIEHVT 79
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
+F S +N RP E+ L+++I+ ++ + ++ IG+ L VLKE
Sbjct: 80 LFMLSDDNLGRPAEELGPLIEVIEETVRDITAEGRDWEVR--AIGSLDMLPGSSARVLKE 137
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLD 175
A T GL + +A Y R EI A+K+ F++ + ++ I+++L
Sbjct: 138 ATAATTGRGGLKVDVAVGYGGRREIVDAVKSAFEEHIAAGGDPAELVARFGIDDISRHLY 197
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
+ D IIRT GE+RLS FLLWQ AY+E ++ YWP F F AL Y R+RR
Sbjct: 198 SPVADHTDFIIRTSGEQRLSGFLLWQSAYAEMHWVDCYWPAFRHVDFLRALRSYANRERR 257
Query: 236 FGG 238
FG
Sbjct: 258 FGK 260
>gi|289642683|ref|ZP_06474823.1| undecaprenyl diphosphate synthase [Frankia symbiont of Datisca
glomerata]
gi|289507513|gb|EFD28472.1| undecaprenyl diphosphate synthase [Frankia symbiont of Datisca
glomerata]
Length = 220
Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats.
Identities = 82/212 (38%), Positives = 126/212 (59%)
Query: 28 RGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLK 87
RGLPR GH G + + V A E+G++ L+++AFS NW+R E++ L++
Sbjct: 2 RGLPRTKGHEAGEDALFDCVEGAIELGVRWLSVYAFSTENWKRSPDEVAFLMRFTDGVFG 61
Query: 88 KGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRA 147
+ + ++VR G R L +++ L+ AE++TR N L L + NY R E++ A
Sbjct: 62 RRIDDMDTLGVRVRWAGRRPRLWSNVIRRLETAEERTRGNDRLTLVMCVNYGGRAELADA 121
Query: 148 IKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEF 207
I +D+ G + +D + +A+YLD ++PD DL+IRT GE+RLS+FLLWQ AY+EF
Sbjct: 122 AAAIARDVRDGRLRPERIDENTLARYLDEPEMPDVDLLIRTSGEQRLSNFLLWQAAYAEF 181
Query: 208 VFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
VF+ WPDF R + A + RDRR+GG+
Sbjct: 182 VFVERLWPDFDRRDLWAACLDFAKRDRRYGGV 213
>gi|327308808|ref|XP_003239095.1| hypothetical protein TERG_01080 [Trichophyton rubrum CBS 118892]
gi|326459351|gb|EGD84804.1| hypothetical protein TERG_01080 [Trichophyton rubrum CBS 118892]
Length = 304
Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats.
Identities = 67/235 (28%), Positives = 121/235 (51%), Gaps = 2/235 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + P HI II DGN RWA +R + GH+ G + I+ + G++ +T
Sbjct: 20 LMKIVQQGPVPKHIAIIADGNRRWAKSREINVRNGHQMGAKSLENILDLFFDTGVECVTA 79
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF-YSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
+ FSI N++RP ++ +L+ + +++++K S K I+ RV+G L + I ++++
Sbjct: 80 YLFSIENFKRPKEQVDDLMDISETWIQKYLYPSPNKRKIRFRVLGRLELLPEKIRKLIEK 139
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV 179
++T + F Y+SRDEI+RAI+ ++ ++ + I +D +
Sbjct: 140 LTEKTADFDEGTFNVCFPYTSRDEIARAIEMTVRNHNDSPENVENITAEAIDSNMDICND 199
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFV-FIPEYWPDFSRELFFHALNQYNLRD 233
P D++IRT G RLSDFLLWQ + + +WP+F F A+ + +
Sbjct: 200 PPLDVLIRTSGVCRLSDFLLWQCHRDTVIEVLNIHWPEFRYWHLFLAVLGWQRKK 254
>gi|315638465|ref|ZP_07893642.1| undecaprenyl diphosphate synthase [Campylobacter upsaliensis JV21]
gi|315481456|gb|EFU72083.1| undecaprenyl diphosphate synthase [Campylobacter upsaliensis JV21]
Length = 222
Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats.
Identities = 74/228 (32%), Positives = 123/228 (53%), Gaps = 11/228 (4%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ ++MDGN RWA A+G G+ +G++ ++++ E I LT+FAFS NW RP
Sbjct: 5 KHLAVVMDGNRRWAKAKGFLAKFGYTRGVKTLQKLMSVCIEEQISQLTLFAFSTENWNRP 64
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E+ + KL++ L +KN ++++ IG+ LD+ + + E++T+ L
Sbjct: 65 ADEVEFIFKLLERCLDDALKEFEKNGVRLKAIGDLSRLDEKLKEKIALVEEKTKHCERLC 124
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP-DPDLIIRTGG 190
+ +A +Y SRDEI RA K + + ++ ++ L D+P D DL++R G
Sbjct: 125 VNLAISYGSRDEIVRAAKRVVEKGL-------ELSEENLSANL---DLPLDVDLMLRVGN 174
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
KRLS+FLLWQ +Y+E F +P + F + +Y R+R FG
Sbjct: 175 AKRLSNFLLWQSSYAEICFSETLFPSLTIREFKKIIKEYRKRERTFGK 222
>gi|15594465|ref|NP_212254.1| undecaprenyl pyrophosphate synthase [Borrelia burgdorferi B31]
gi|226321969|ref|ZP_03797494.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia burgdorferi
Bol26]
gi|6136143|sp|O51146|UPPS_BORBU RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|2688015|gb|AAC66517.1| conserved hypothetical protein [Borrelia burgdorferi B31]
gi|226232559|gb|EEH31313.1| di-trans,poly-cis-decaprenylcistransferase [Borrelia burgdorferi
Bol26]
Length = 230
Score = 218 bits (555), Expect = 6e-55, Method: Composition-based stats.
Identities = 87/234 (37%), Positives = 132/234 (56%), Gaps = 4/234 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M S P H+GIIMDGN RWA + L G+++G++ EIV + VGIK L+ + FS
Sbjct: 1 MNKGSLPSHVGIIMDGNRRWALGKRLSSLEGYKEGLKRAKEIVKYSLRVGIKCLSFYVFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRR EI L+ LI ++L+ F +KN IK+ V G+ SL ++ +K++ +
Sbjct: 61 TENWRRDDCEIENLMFLIANYLRAEFDFYEKNGIKIIVSGDVESLSGEVKSSIKDSISFS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ L L +A NY R+EI RA+K S ++ ++ + +LD ++PD DL
Sbjct: 121 KNFNNLILNLAINYGGRNEILRAVKKFV----SSDFDLESLNENIFSSFLDNPELPDLDL 176
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+IRTGG R+S+F LW++AYSE +F WP++ + L + R R FG
Sbjct: 177 LIRTGGNIRISNFFLWRIAYSELIFSNVLWPEYYDTRYSKDLECFQFRRRNFGR 230
>gi|170782747|ref|YP_001711081.1| putative undecaprenyl pyrophosphate synthetase [Clavibacter
michiganensis subsp. sepedonicus]
gi|169157317|emb|CAQ02504.1| putative undecaprenyl pyrophosphate synthetase [Clavibacter
michiganensis subsp. sepedonicus]
Length = 261
Score = 218 bits (555), Expect = 7e-55, Method: Composition-based stats.
Identities = 82/239 (34%), Positives = 129/239 (53%), Gaps = 9/239 (3%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLP-RCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ ++ P HI +I+DGN RWA GL GHR G F E + ++ IK T++
Sbjct: 25 LDRNALPHHIAMILDGNRRWARQLGLESAAHGHRAGAAKFLEFLEWCDDLDIKVTTLYLL 84
Query: 64 SINNW-RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
S +N R +E++ L+ +I + K + +V+ +G+ L +++ L +E+
Sbjct: 85 STDNLTGRGSAELTALIDIIGELAE---DLSKHRDWRVKHVGSDEGLPPELIARLDASEE 141
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLDTSD 178
+++ N GL++ +A Y R EI+ A+++I Q D+ LI ++L TS
Sbjct: 142 RSQGNGGLHINLAVGYGGRTEIADAMRSIVQQHHLAGGTLEDLAALLTPDLIGEHLYTSG 201
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDPDL+IRT GE+R+SDF+LWQ A+SE F+ PD F AL Y+ R RRFG
Sbjct: 202 QPDPDLVIRTSGEQRISDFMLWQSAHSELYFMEALGPDLREVDFLRALRDYSSRQRRFG 260
>gi|156377922|ref|XP_001630894.1| predicted protein [Nematostella vectensis]
gi|156217924|gb|EDO38831.1| predicted protein [Nematostella vectensis]
Length = 296
Score = 218 bits (555), Expect = 7e-55, Method: Composition-based stats.
Identities = 72/227 (31%), Positives = 107/227 (47%), Gaps = 36/227 (15%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ S P H+ IIMDGN R+A R GH KG E E++ E+GI +T++AFS
Sbjct: 21 LKSGEIPKHVAIIMDGNRRFAKKVNCERSKGHEKGFEKLTEVLEWCFELGIPEVTVYAFS 80
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
I N++R E+ L++L K +
Sbjct: 81 IENFKRSKDEVECLMELAKQKFDRLLEERH------------------------------ 110
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
L + Y+SR EI AIK + + +E G++ D+ +++ + L T P+PDL
Sbjct: 111 ------VLNVCMAYTSRHEICEAIKTMAKAVEDGALKPMDISENVLDQCLYTHQSPEPDL 164
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
+IRT GE R SDFLLWQ +Y+ F+ WP+FS F+ A+ Y
Sbjct: 165 LIRTSGEVRFSDFLLWQCSYTSLSFLKVLWPEFSVWNFYSAILSYQW 211
>gi|312070081|ref|XP_003137981.1| hypothetical protein LOAG_02395 [Loa loa]
gi|307766849|gb|EFO26083.1| hypothetical protein LOAG_02395 [Loa loa]
Length = 303
Score = 217 bits (554), Expect = 8e-55, Method: Composition-based stats.
Identities = 72/239 (30%), Positives = 121/239 (50%), Gaps = 10/239 (4%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAA-ARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P+HI IMDGN R++ R GHRKG + +++ E G+K +T++A
Sbjct: 20 LTLGPIPEHIAFIMDGNRRYSRLQRYSSFVEGHRKGFDKLTKVMQWCREFGVKEVTVYAL 79
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYS---------LKKNNIKVRVIGNRLSLDDDIL 114
S+ N++R +EI +L+ L + L + L +N+I+++ G+ L +
Sbjct: 80 SLENFKRSATEIDDLMTLFEHKLTQLLDESLRLYFRDKLIENDIRIQFFGDLKHLPPKLR 139
Query: 115 CVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYL 174
+ + E TR + + + Y+++DE+ RA I ++ G + + D++ LI++ L
Sbjct: 140 QYIAKIELLTREHNSGRVNVCIAYTAQDELRRAFVTIAHGVQKGLLATTDINEYLISRCL 199
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
D+ DPDL+IRT GE RLSDFLLWQ + F WP+F A+ Y
Sbjct: 200 DSRFSNDPDLLIRTSGETRLSDFLLWQCSKCYIYFDKVLWPNFDYWNLCKAIYFYQQNQ 258
>gi|255723455|ref|XP_002546661.1| dehydrodolichyl diphosphate synthetase [Candida tropicalis
MYA-3404]
gi|240130792|gb|EER30355.1| dehydrodolichyl diphosphate synthetase [Candida tropicalis
MYA-3404]
Length = 331
Score = 217 bits (554), Expect = 8e-55, Method: Composition-based stats.
Identities = 84/236 (35%), Positives = 136/236 (57%), Gaps = 9/236 (3%)
Query: 1 MVASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
M+ ++S+ P P H+GIIMDGN R+A + GH G + I+ E G+K+ T
Sbjct: 21 MLGRIVSTGPVPQHVGIIMDGNRRYAKTHKIEIKEGHSLGFDTMASILELLYESGVKSAT 80
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFL---KKGFYSLKKNNIKVRVIGNRLSLDDDILCV 116
++AFSI N++R E+ L+ L KS + K+ +K+R++GN+ L D+L +
Sbjct: 81 VYAFSIENFKRSSYEVKWLMDLAKSKFTQINQHGLLCKEYGVKIRILGNKKLLPKDVLEI 140
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT 176
L++ E+ T+ NT L + F Y+SRDE++ +I+ + + G++ ++D S I ++L T
Sbjct: 141 LEQTEEITKDNTRAVLNVCFPYTSRDEMTHSIQEVVDRSKEGNI---EIDESTIDEHLYT 197
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEF--VFIPEYWPDFSRELFFHALNQYN 230
+VP DL++RT G RLSDFLLWQ + VF+ + WP FS F L ++
Sbjct: 198 REVPPLDLLVRTSGTYRLSDFLLWQTVSPDCAVVFVDKLWPAFSPWDMFKILINWS 253
>gi|239943134|ref|ZP_04695071.1| hypothetical protein SrosN15_19226 [Streptomyces roseosporus NRRL
15998]
gi|239989592|ref|ZP_04710256.1| hypothetical protein SrosN1_19986 [Streptomyces roseosporus NRRL
11379]
Length = 254
Score = 217 bits (554), Expect = 8e-55, Method: Composition-based stats.
Identities = 80/244 (32%), Positives = 119/244 (48%), Gaps = 8/244 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARG-LPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ A + P HIGI++DGN RWA G G++ G + + I+++T
Sbjct: 13 LSARLAGRPRPGHIGIMLDGNRRWAKVAGYKDPREGYKAGGAKVVQFLQWCGSAEIEHVT 72
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
+F S +N RP E+ L+ +I+ + + + N V ++G L + LK
Sbjct: 73 LFMLSDDNLNRPERELLPLIGVIEDVVDQL--AAPANPWVVEIVGALDLLPAESANRLKR 130
Query: 120 AEDQTRLNTGLN-LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYL 174
A +T TG + IA Y R EI A+++ + ++ I+K+L
Sbjct: 131 AAAETHGRTGGTRVDIAVGYGGRREIVHAVRSAILEHGERGGDLEELAETFTMEHISKHL 190
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
+ P+ DLIIRT GE+RLS FLLWQ AY+E F YWPDF F AL Y+ RDR
Sbjct: 191 YSKVRPESDLIIRTSGEQRLSGFLLWQSAYAEVYFCECYWPDFREIDFLRALRSYSERDR 250
Query: 235 RFGG 238
R+G
Sbjct: 251 RYGR 254
>gi|224173175|ref|XP_002339738.1| predicted protein [Populus trichocarpa]
gi|222832143|gb|EEE70620.1| predicted protein [Populus trichocarpa]
Length = 211
Score = 217 bits (554), Expect = 8e-55, Method: Composition-based stats.
Identities = 77/211 (36%), Positives = 113/211 (53%), Gaps = 2/211 (0%)
Query: 30 LPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKG 89
L GH +G + E++ A EVGI+ +T++ FS N++R E++ L LI L+
Sbjct: 1 LTPNEGHVRGKDKLEEVLDWAMEVGIRIVTVYGFSSENFKRDPEEVNFLFDLINDSLRGL 60
Query: 90 FY--SLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRA 147
+ KN I+VR+IG+ L + ++ + + E T IA Y R EI A
Sbjct: 61 LKDDRIFKNQIRVRIIGDFKGLPEYLVNTIHDVEKITAGFKKFKFNIAIGYGGRQEIIDA 120
Query: 148 IKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEF 207
+KNI D+ S + D++ L YL + + DPDLI+RT GE+R+S+FLLWQ AYSE
Sbjct: 121 VKNIAADVVSKKLKIEDINEKLFRNYLYDNTLTDPDLILRTSGEERISNFLLWQSAYSEL 180
Query: 208 VFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
F WPD + F A+ Y R RR+G
Sbjct: 181 YFSDVNWPDLKKLDFLRAIYSYQSRKRRYGK 211
>gi|21222267|ref|NP_628046.1| undecaprenyl pyrophosphate synthase [Streptomyces coelicolor A3(2)]
gi|42560021|sp|Q9XA06|UPPS2_STRCO RecName: Full=Undecaprenyl pyrophosphate synthase 2; Short=UPP
synthase 2; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase 2;
AltName: Full=Undecaprenyl diphosphate synthase 2;
Short=UDS 2
gi|5102810|emb|CAB45225.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)]
Length = 258
Score = 217 bits (554), Expect = 9e-55, Method: Composition-based stats.
Identities = 78/244 (31%), Positives = 119/244 (48%), Gaps = 8/244 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLT 59
+V + P HIGI++DGN RWA G+ G+R G + + I+++T
Sbjct: 17 LVRELEGRPRPQHIGIMLDGNRRWAKMSGIDDPREGYRAGGAKVLDFLRWCDSAQIEHVT 76
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
+F S +N RP +++ L+ +I +++ + N V +G L + LK
Sbjct: 77 LFMLSDDNLARPEEQLNPLIDIIAEVVEQL--AAPGNPWPVEAVGALDLLPAESASRLKT 134
Query: 120 AEDQTRLNTGLN-LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYL 174
A T+ G + +A Y R EI A+++ + S + I+K+L
Sbjct: 135 ATAATQGRKGGTKVDVAVGYGGRREIVDAVRSALTEHSSQGGDIDEFIETFTMEHISKHL 194
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
+ + DLIIRT GE+RLS FLLWQ AY+E F YWPDF F AL Y+LR+R
Sbjct: 195 YSKTRSESDLIIRTSGEQRLSGFLLWQSAYAEVHFCETYWPDFREIDFLRALRSYSLRER 254
Query: 235 RFGG 238
R+G
Sbjct: 255 RYGR 258
>gi|307107718|gb|EFN55960.1| hypothetical protein CHLNCDRAFT_10741 [Chlorella variabilis]
Length = 254
Score = 217 bits (554), Expect = 9e-55, Method: Composition-based stats.
Identities = 66/228 (28%), Positives = 114/228 (50%), Gaps = 4/228 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
P H+ + MDGN R+A AR + + GH G + + E+G++ ++++AFSI+N
Sbjct: 18 GPVPRHVALCMDGNRRYAQARHMRQVEGHTFGYRRLIDALEWCLELGVRYVSVYAFSIDN 77
Query: 68 WRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
+RR E+ L+ L + L L ++ ++VRV+G+ + + T
Sbjct: 78 YRRCGEEVDTLMALAEEKLAHMLQEYDVLVRHGVQVRVVGDLSLAPAAVQVAATRIMEAT 137
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIES-GSVCSHDVDSSLIAKYLDTSDVPDPD 183
+ L + F+Y++ +E+ RA+ ++ S S + ++ + L T P D
Sbjct: 138 AQHDRAVLNLCFSYTASEELQRALDDLAAHPAPSSSSGSGSLTAAGLDGQLYTRGCPPVD 197
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
L++RT GE RLSDFLLWQ ++ VF P WPDF A+ ++
Sbjct: 198 LLVRTSGETRLSDFLLWQCRHALLVFTPVLWPDFGFLDLVAAVLEFQR 245
>gi|164659390|ref|XP_001730819.1| hypothetical protein MGL_1818 [Malassezia globosa CBS 7966]
gi|159104717|gb|EDP43605.1| hypothetical protein MGL_1818 [Malassezia globosa CBS 7966]
Length = 291
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 69/233 (29%), Positives = 120/233 (51%), Gaps = 12/233 (5%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEV-GIKNLTIFA 62
S+ + P HI IMDGN RW+ A + GH KG E ++ + I+ +T++A
Sbjct: 60 SLSTGPLPRHIAFIMDGNRRWSRAHNMRVQEGHLKGFEALKRVLDLCLSLQRIEVVTVYA 119
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKE 119
F+I+N++R E+ L++L ++ L + + + +++I +RV+G+R L + +
Sbjct: 120 FAIDNFKRDPDEVHALMELARTRLLELYEHSDFVARHSICIRVVGHREYLPPSVQETARR 179
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV 179
E+ T+ NTG L I Y+S+ EI A + + S + + ++ +L D
Sbjct: 180 VEEATQHNTGPTLNICMPYASQAEICHAA-------QQATKNSQQLTPASLSSHLMVPDD 232
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVA-YSEFVFIPEYWPDFSRELFFHALNQYNL 231
P D+++RT RLSDFLLWQ +++ F+ +YWP F L +Y
Sbjct: 233 PPVDILVRTSRVSRLSDFLLWQSNEHTQMHFVDQYWPMFGACDLIPILLEYQR 285
>gi|118381126|ref|XP_001023724.1| undecaprenyl diphosphate synthase family protein [Tetrahymena
thermophila]
gi|89305491|gb|EAS03479.1| undecaprenyl diphosphate synthase family protein [Tetrahymena
thermophila SB210]
Length = 292
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 72/232 (31%), Positives = 120/232 (51%), Gaps = 5/232 (2%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + P+H+ IMDGN R+A +G + GH G F + +G+K +T+F
Sbjct: 46 IKVLKQGHIPNHVAFIMDGNRRYATNQGKQKTEGHFSGFVTFKKCCEWCFHLGVKEMTVF 105
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCVLK 118
AF+I N+ R E+ L+ L + L+K L++ NIKV+V G+ L ++ +
Sbjct: 106 AFAIENFNRSKEEVEVLMNLAQKSLRKLANDGEFLQRYNIKVKVCGDLKLLPQEVQQSML 165
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
E E+ T+ N L L I F Y+S++EI I + +E + + +D+ +I + +
Sbjct: 166 EMEELTKNNKTLLLNICFAYNSQNEIENCFSQIKKQVEDKKLDINKIDNKVIMENMHIK- 224
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
PD++IRT E RLS+FL +Q ++ +FI E WP+ S + QY
Sbjct: 225 -TCPDILIRTSNENRLSNFLTYQSTNTQIIFIKENWPELSIFSILKIIIQYQ 275
>gi|76802908|ref|YP_331003.1| di-trans,poly-cis-decaprenylcistransferase 1; (Z)-prenyl
diphosphate synthase 1 [Natronomonas pharaonis DSM 2160]
gi|76558773|emb|CAI50366.1| di-trans,poly-cis-decaprenylcistransferase 1; (Z)-prenyl
diphosphate synthase 1 [Natronomonas pharaonis DSM 2160]
Length = 306
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 76/230 (33%), Positives = 111/230 (48%), Gaps = 4/230 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S+ P H+ +I DGN R+A +G AGHR G E ++ A++G++ LT++AFS N
Sbjct: 21 SAAPSHVAVIQDGNRRYAETQGEAATAGHRAGAETTERVLEWCADLGVEELTLYAFSTEN 80
Query: 68 WRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
+ RP E L LI L++ + +++R IG L D + AE +T
Sbjct: 81 FERPPDEREALFDLIAEKLREFADHEEVHDREVRIRAIGQTHRLPDRVREAAAYAERRTE 140
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
L L IA Y R E+ ++I + +G + V I L DLI
Sbjct: 141 GYDALRLNIALAYGGRAELLDVARDIAAEAAAGDLDPEAVTVDEIESRLTAGPTQAVDLI 200
Query: 186 IRTGGEKRLSDFLLWQVAYSE--FVFIPEYWPDFSRELFFHALNQYNLRD 233
IRTGG++R S+FL W +E F YWP+FSR F A+ Y R+
Sbjct: 201 IRTGGDERTSNFLPWHANGNEAAVYFCTPYWPEFSRIDFLRAIRTYEARE 250
>gi|57242352|ref|ZP_00370291.1| Undecaprenyl pyrophosphate synthetase [Campylobacter upsaliensis
RM3195]
gi|57017032|gb|EAL53814.1| Undecaprenyl pyrophosphate synthetase [Campylobacter upsaliensis
RM3195]
Length = 222
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 75/228 (32%), Positives = 124/228 (54%), Gaps = 11/228 (4%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ ++MDGN RWA A+G G+ +G++ ++++ E I LT+FAFS NW RP
Sbjct: 5 KHLAVVMDGNRRWAKAKGFLAKFGYTRGVKTLQKLMSVCIEEQISQLTLFAFSTENWNRP 64
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
V E+ + KL++ L +KN ++++ IGN L++ + + E++T+ L
Sbjct: 65 VDEVEFIFKLLERCLDDALKEFEKNGVRLKAIGNLSRLNEKLKEKIALVEEKTKHCERLC 124
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP-DPDLIIRTGG 190
+ +A +Y SRDEI RA K + + ++ ++ L D+P D DL++R G
Sbjct: 125 VNLAISYGSRDEIVRAAKRVVEKGL-------ELSEENLSANL---DLPLDVDLMLRVGD 174
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
KRLS+FLLWQ +Y+E F +P + F + +Y R+R FG
Sbjct: 175 AKRLSNFLLWQSSYAEICFSETLFPSLTIREFKKIIKEYRKRERTFGK 222
>gi|302829146|ref|XP_002946140.1| hypothetical protein VOLCADRAFT_55634 [Volvox carteri f.
nagariensis]
gi|300268955|gb|EFJ53135.1| hypothetical protein VOLCADRAFT_55634 [Volvox carteri f.
nagariensis]
Length = 262
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 66/230 (28%), Positives = 112/230 (48%), Gaps = 6/230 (2%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+ P H+ +MDGN R+A + L + GH G +++ E+G+K +T++AFSI+N
Sbjct: 23 GAVPVHVAFVMDGNRRYAERQHLDKATGHTHGYGKMVDVIHWCIELGVKYITVYAFSIDN 82
Query: 68 WRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
++R E++ L++L + + ++ I++ ++G+ + T
Sbjct: 83 FKRSPDEVAALMQLAEQKYIELAQDNGLAEREGIRMHIVGDLELPPPAVQGAAARLMRGT 142
Query: 125 RL--NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT-SDVPD 181
L + F+Y++ +E A+ I Q + G + DV S + L T S P
Sbjct: 143 AALPRHRATLNVCFSYTASEESVNAVHEIQQAVRDGLLLPGDVTSETLMGALHTGSSCPP 202
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
DL+IRT GE RLSDFLLWQ A++ ++ WPD S F + Y
Sbjct: 203 VDLLIRTSGETRLSDFLLWQAAHAHLCYLRTLWPDLSYWDFARCVMSYKR 252
>gi|326469492|gb|EGD93501.1| hypothetical protein TESG_01045 [Trichophyton tonsurans CBS 112818]
gi|326484399|gb|EGE08409.1| dehydrodolichyl diphosphate synthase [Trichophyton equinum CBS
127.97]
Length = 304
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 64/235 (27%), Positives = 121/235 (51%), Gaps = 2/235 (0%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+++ + P H+ II DGN RWA + + GH+ G + I+ + G++ +T+
Sbjct: 20 LMSIVQQGPVPKHVAIIADGNRRWAKSHEINIKRGHQIGAMTMHNILDLFFDTGVECVTV 79
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF-YSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
+ FSI N++RP ++ +L+ L + +++ K I+ + +G L + I ++KE
Sbjct: 80 YLFSIENFKRPKDQVDDLMDLSEIWIRWHLSPPPNKRKIRFQFLGRLELLPEKIRKLIKE 139
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV 179
++T + F+Y+SRDE++RAI+ ++ + ++ + I +DT +
Sbjct: 140 LVEKTADYDEGTFNVCFSYTSRDEMARAIEMTVRNHNNSPENGGNITAETIDNNMDTFND 199
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFV-FIPEYWPDFSRELFFHALNQYNLRD 233
P D++IRT G RLSDFLLWQ + + +WP+F F A+ + +
Sbjct: 200 PPLDVLIRTSGVNRLSDFLLWQCHRDTIIEVLDIHWPEFRYWHLFRAVLGWQRKK 254
>gi|170104577|ref|XP_001883502.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164641566|gb|EDR05826.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 265
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 64/237 (27%), Positives = 114/237 (48%), Gaps = 9/237 (3%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + + P H+ +MDGN R+A + GH G ++ + ++ ++ +
Sbjct: 24 LRVLAAGPVPRHVAFVMDGNRRYARRQQKQVQEGHVDGYVALRRMLEVCLRLNVQCVSAY 83
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLK 118
AFSI N++R E+ L+KL + L + L + +++ V+G L + + ++
Sbjct: 84 AFSIENFKRSEDEVEALMKLAEEKLLELCEHGDILDEYGVRLNVLGRTSLLPEKVQLAVQ 143
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS- 177
+AE TR NT L + Y+SRDEI+ A+++ + + + + I L TS
Sbjct: 144 KAESMTRHNTRAILNLCMPYTSRDEITTAVESCVR---NADPSNPQITEKDIDAQLMTSL 200
Query: 178 -DVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFFHALNQYNLR 232
P D+++RT G KRLSDFLLWQ ++ +WPDF F + + +
Sbjct: 201 GCSPPLDILVRTSGVKRLSDFLLWQCCEDTQIQISSTFWPDFGLFDFVPIILDFQRK 257
>gi|291446610|ref|ZP_06586000.1| undecaprenyl pyrophosphate synthetase 2 [Streptomyces roseosporus
NRRL 15998]
gi|291349557|gb|EFE76461.1| undecaprenyl pyrophosphate synthetase 2 [Streptomyces roseosporus
NRRL 15998]
Length = 260
Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats.
Identities = 80/244 (32%), Positives = 119/244 (48%), Gaps = 8/244 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARG-LPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ A + P HIGI++DGN RWA G G++ G + + I+++T
Sbjct: 19 LSARLAGRPRPGHIGIMLDGNRRWAKVAGYKDPREGYKAGGAKVVQFLQWCGSAEIEHVT 78
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
+F S +N RP E+ L+ +I+ + + + N V ++G L + LK
Sbjct: 79 LFMLSDDNLNRPERELLPLIGVIEDVVDQL--AAPANPWVVEIVGALDLLPAESANRLKR 136
Query: 120 AEDQTRLNTGLN-LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYL 174
A +T TG + IA Y R EI A+++ + ++ I+K+L
Sbjct: 137 AAAETHGRTGGTRVDIAVGYGGRREIVHAVRSAILEHGERGGDLEELAETFTMEHISKHL 196
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
+ P+ DLIIRT GE+RLS FLLWQ AY+E F YWPDF F AL Y+ RDR
Sbjct: 197 YSKVRPESDLIIRTSGEQRLSGFLLWQSAYAEVYFCECYWPDFREIDFLRALRSYSERDR 256
Query: 235 RFGG 238
R+G
Sbjct: 257 RYGR 260
>gi|28572591|ref|NP_789371.1| undecaprenyl pyrophosphate synthetase [Tropheryma whipplei TW08/27]
gi|42559960|sp|Q83HR7|UPPS1_TROW8 RecName: Full=Undecaprenyl pyrophosphate synthase 1; Short=UPP
synthase 1; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase 1;
AltName: Full=Undecaprenyl diphosphate synthase 1;
Short=UDS 1
gi|28410723|emb|CAD67109.1| undecaprenyl pyrophosphate synthetase [Tropheryma whipplei TW08/27]
Length = 258
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 71/244 (29%), Positives = 123/244 (50%), Gaps = 12/244 (4%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLT 59
++ + ++ P H+ +I+DGN RWA R + GHR G + + E+ I +T
Sbjct: 21 LLGQINLNNLPGHVALIVDGNRRWARKEKRDRISDGHRAGAGKAVDFLHWCDELDINIVT 80
Query: 60 IFAFSINNWR-RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
++ S +N + R E+++LV++I + + + KV +G+ +L + + L+
Sbjct: 81 LYLLSNDNLKNRNRQELNDLVQVICNLIAQ-----VSKRWKVNHVGSCENLPELLGNSLE 135
Query: 119 EAEDQTRLNT----GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYL 174
+ T+ N + + +A YS R EI+ A++ I + +I+ L
Sbjct: 136 GVKSSTKTNRYSERSMTVNLAIGYSGRAEITEAVRKIVNTY-PIGDLPEKITEEVISANL 194
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
T + DPDLIIRT GE+RLSDF+ WQ +SEF F+ PD + F A+ +++R R
Sbjct: 195 YTGGLSDPDLIIRTSGEQRLSDFMPWQSTHSEFYFLEALGPDLRKVDFLRAIRDFSIRRR 254
Query: 235 RFGG 238
FG
Sbjct: 255 SFGA 258
>gi|289580902|ref|YP_003479368.1| undecaprenyl diphosphate synthase [Natrialba magadii ATCC 43099]
gi|289530455|gb|ADD04806.1| undecaprenyl diphosphate synthase [Natrialba magadii ATCC 43099]
Length = 325
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 67/230 (29%), Positives = 111/230 (48%), Gaps = 4/230 (1%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+ P H+ +I DGN R+A G GHR G + +++ ++G++ LT++ FS N
Sbjct: 22 AGAPTHVAVIQDGNRRYARRNGGDAHEGHRAGAQTTEQVLEWCQDIGVEELTLYTFSTEN 81
Query: 68 WRRPVSEISELVKLIKSFLKK--GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
+ RP E L +L+ L + + N + ++ IG L + + + AE +T+
Sbjct: 82 FNRPEDEREALYELLCEKLTEFADADRVHDNEVCIQAIGEIDLLPEHVRDAVAYAERRTQ 141
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
L IA Y R + A + + +D+++ + ++D I + L V D DLI
Sbjct: 142 EYDQFVLNIALAYGGRSRLLEAARGVARDVDADKIDPGEIDVGTIEQRLYDQPVRDVDLI 201
Query: 186 IRTGGEKRLSDFLLWQVAYSE--FVFIPEYWPDFSRELFFHALNQYNLRD 233
IR GGE+R S+FL W +E F YWP+FS+ F + Y R
Sbjct: 202 IRPGGEERTSNFLPWHANGNEAAVFFCTPYWPEFSKADFLRGIRTYEHRK 251
>gi|28493298|ref|NP_787459.1| undecaprenyl pyrophosphate synthase [Tropheryma whipplei str.
Twist]
gi|42559957|sp|Q83GG2|UPPS2_TROWT RecName: Full=Undecaprenyl pyrophosphate synthase 2; Short=UPP
synthase 2; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase 2;
AltName: Full=Undecaprenyl diphosphate synthase 2;
Short=UDS 2
gi|28476339|gb|AAO44428.1| undecaprenyl pyrophosphate synthetase [Tropheryma whipplei str.
Twist]
Length = 258
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 71/244 (29%), Positives = 122/244 (50%), Gaps = 12/244 (4%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLT 59
++ + ++ P H+ +I+DGN RWA R + GHR G + + E+ I +T
Sbjct: 21 LLGQINLNNLPGHVALIVDGNRRWARKEKRDRISDGHRAGAGKAVDFLHWCDELDINIVT 80
Query: 60 IFAFSINNWR-RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
++ S +N + R E+++LV++I + + KV +G+ +L + + L+
Sbjct: 81 LYLLSNDNLKNRNRQELNDLVQVICDLIAQ-----VSKRWKVNHVGSCENLPELLGNSLE 135
Query: 119 EAEDQTRLNT----GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYL 174
+ T+ N + + +A YS R EI+ A++ I + +I+ L
Sbjct: 136 GVKSSTKTNRYSERSMTVNLAIGYSGRAEITEAVRKIVNTY-PIGDLPEKITEEVISANL 194
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
T + DPDLIIRT GE+RLSDF+ WQ +SEF F+ PD + F A+ +++R R
Sbjct: 195 YTGGLSDPDLIIRTSGEQRLSDFMPWQSTHSEFYFLEALGPDLRKVDFLRAIRDFSIRRR 254
Query: 235 RFGG 238
FG
Sbjct: 255 SFGA 258
>gi|148273420|ref|YP_001222981.1| putative undecaprenyl diphosphate synthase [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
gi|147831350|emb|CAN02306.1| putative undecaprenyl diphosphate synthase [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
Length = 261
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 81/239 (33%), Positives = 129/239 (53%), Gaps = 9/239 (3%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLP-RCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ ++ P HI +I+DGN RWA GL GHR G F E + ++ IK T++
Sbjct: 25 LDRNALPHHIAMILDGNRRWARQLGLESAAHGHRAGAAKFLEFLEWCDDLDIKVTTLYLL 84
Query: 64 SINNW-RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
S +N R +E++ L+ +I + + + +V+ +G+ L +++ L +E+
Sbjct: 85 STDNLTGRGSAELTALIDIIGELAE---DLSRHRDWRVKHVGSDEGLPLELIARLDASEE 141
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLDTSD 178
+++ N GL++ +A Y R EI+ A+++I Q D+ LI ++L TS
Sbjct: 142 RSKGNAGLHINLAVGYGGRTEIADAMRSIVQQHHLAGGTLEDLAALLTPDLIGEHLYTSG 201
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDPDL+IRT GE+R+SDF+LWQ A+SE F+ PD F AL Y+ R RRFG
Sbjct: 202 QPDPDLVIRTSGEQRISDFMLWQSAHSELYFMEALGPDLREVDFLRALRDYSSRQRRFG 260
>gi|296207141|ref|XP_002750513.1| PREDICTED: dehydrodolichyl diphosphate synthase isoform 2
[Callithrix jacchus]
Length = 299
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 70/229 (30%), Positives = 110/229 (48%), Gaps = 37/229 (16%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IMDGN R+A + R GH +G E + +GI +T++AFS
Sbjct: 20 IKAGPVPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSF---LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R SE+ L+ L + L + L+K+ + +RV+G+ L D+ ++ +A
Sbjct: 80 IENFKRSKSEVDGLMDLARQKFSRLMEEQEKLQKHGVCIRVLGDLHLLPLDLQELIAQAV 139
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T+ +D+ SL+ K L T+ P
Sbjct: 140 QATKNYN----------------------------------NDISESLLDKCLYTNRSPH 165
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
PD++IRT GE RLSDFLLWQ ++S VF P WP+++ F A+ Q+
Sbjct: 166 PDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQ 214
>gi|317155471|ref|XP_001825131.2| hypothetical protein AOR_1_268074 [Aspergillus oryzae RIB40]
Length = 297
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 73/236 (30%), Positives = 120/236 (50%), Gaps = 5/236 (2%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + P HI IMDGN R+A G+P GH G E + +V A G+K +T++
Sbjct: 11 INIIRRGPVPQHIAFIMDGNRRYAKGHGIPTAKGHYLGAEAMSNVVEACFLSGVKGVTVY 70
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFY---SLKKNNIKVRVIGNRLSLDDDILCVLK 118
AFS+ N++RP EI +L+ L K + + ++ + +RV+G LD+D+ +L+
Sbjct: 71 AFSLENFKRPKEEIVQLMNLFKFQIYELCKPGGLAERFQVSIRVLGQLDLLDEDLKALLR 130
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
+ TR TG + Y+SRDEI A+ S D+ ++ +Y+ T+D
Sbjct: 131 QIMVDTRNRTGGFINCCVAYTSRDEIVTAMSR-AVRSSQLKHSSADITDEVLTRYMYTAD 189
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFFHALNQYNLRD 233
P D+++RT G RLSDFLLWQ ++ + WP+F F + ++ +
Sbjct: 190 DPAVDVLVRTSGVSRLSDFLLWQCHEDTDIQIVDAMWPEFGIYHLFLVIVRWQRKQ 245
>gi|46204828|ref|ZP_00049422.2| COG0020: Undecaprenyl pyrophosphate synthase [Magnetospirillum
magnetotacticum MS-1]
Length = 220
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 93/223 (41%), Positives = 127/223 (56%), Gaps = 11/223 (4%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA+ARGLPR AGHR G++ + A ++GI LT++AFS +NWRRP E+
Sbjct: 1 MDGNGRWASARGLPRGAGHRAGVKTIQRVAEVAPDLGIGTLTLYAFSSDNWRRPAEEVGG 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L++++L+ L + ++ VIG R L I + AE T L+L IA +
Sbjct: 61 LMRLLRAYLRGETERLARTGTRLSVIGRRDRLPAGIPEAIARAEAATAAGDRLHLRIAVD 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
YSSRD I A + + ++ L D DL+IRTGGEKRLSDF
Sbjct: 121 YSSRDAILAAAARLG---------PEGLSREGLSGALGADG--DVDLLIRTGGEKRLSDF 169
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
LLW+ AY+E F WPDF A+ ++ RDRRFGGL+
Sbjct: 170 LLWEAAYAELHFTDRMWPDFGTADLATAIADFSARDRRFGGLN 212
>gi|126540557|emb|CAM46102.1| dehydrodolichyl diphosphate synthase [Mus musculus]
gi|126541189|emb|CAM46079.1| dehydrodolichyl diphosphate synthase [Mus musculus]
Length = 299
Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats.
Identities = 73/240 (30%), Positives = 111/240 (46%), Gaps = 40/240 (16%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IMDGN R+A + R GH +G E + +GI +T++AFS
Sbjct: 20 IKAGPVPKHIAFIMDGNRRYAKKCQVERQEGHTQGFNKLAETLRWCLNLGILEVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKS---FLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R SE+ L+ L + L + L+K+ + +RV+G+ L D+ + A
Sbjct: 80 IENFKRSKSEVDGLLDLARQKFSCLMEEQEKLQKHGVCIRVLGDLHLLPLDLQEKIAHAI 139
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T+ +DV SL+ K L ++ P
Sbjct: 140 QATKNYN----------------------------------NDVSESLLDKCLYSNHSPH 165
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
PD++IRT GE RLSDFLLWQ ++S VF P WP+++ A+ Q+ R G L K
Sbjct: 166 PDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLCEAILQFQ---RNHGALQK 222
>gi|50426751|ref|XP_461973.1| DEHA2G09812p [Debaryomyces hansenii CBS767]
gi|49657643|emb|CAG90443.1| DEHA2G09812p [Debaryomyces hansenii]
Length = 306
Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats.
Identities = 76/238 (31%), Positives = 136/238 (57%), Gaps = 8/238 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+V+ M +S P HIG+IMDGN R+A ++ + GH G + +++ ++GI ++T+
Sbjct: 26 IVSMMRTSPIPKHIGLIMDGNRRYAKSKDMELKDGHNAGADSLIQVLNTCYKLGILHVTV 85
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLK----KGFYSLKKNNIKVRVIGNRLSLDDDILCV 116
+AFSI N+ R E+ L L++ LK K + NNI++++IGNR + DIL
Sbjct: 86 YAFSIENFNRSKEEVDTLFALLRDRLKFISEKEESYARFNNIRIKIIGNRTMIPSDILKD 145
Query: 117 LKEAEDQTRL-NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD-VDSSLIAKYL 174
L++ E++T+ ++ L + F Y+SRD+I +I++I + +ES + S+ + + +
Sbjct: 146 LEDIEERTKHVSSAKVLNVCFPYTSRDDIVHSIQSIAEKVESKEIESNQHITLETLTNNM 205
Query: 175 DT-SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFV-FIPEYWPDFSRELFFHALNQYN 230
+ P D++IRT G RLSDF+LWQ Y+ + F+ WP+F + +++
Sbjct: 206 YMGPNTPPLDILIRTSGHTRLSDFMLWQCNYNCMIEFVDTLWPEFRSWDIMSIIIKWS 263
>gi|254574318|ref|XP_002494268.1| Cis-prenyltransferase involved in dolichol synthesis [Pichia
pastoris GS115]
gi|238034067|emb|CAY72089.1| Cis-prenyltransferase involved in dolichol synthesis [Pichia
pastoris GS115]
gi|328353911|emb|CCA40308.1| cis-prenyltransferase, dehydrodolichyl diphosphate synthase [Pichia
pastoris CBS 7435]
Length = 280
Score = 215 bits (549), Expect = 4e-54, Method: Composition-based stats.
Identities = 81/244 (33%), Positives = 129/244 (52%), Gaps = 6/244 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HIG IMDGN R+A + GH G E ++ + G+K+ TIFAFS
Sbjct: 26 VRTGPVPQHIGFIMDGNRRYARINQIEVKEGHNAGFESLARLLQVCYKCGVKSATIFAFS 85
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R E+ L++L K + +K IK+R +G++ L D++ L+EAE
Sbjct: 86 IENYKRNSFEVDWLMELAKMRFGQMIEKGDLCEKYGIKIRTLGDKSLLPRDVVECLEEAE 145
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T N+ L + F+Y+SR EI+ I NI ++++ G + D+ +I L T D P
Sbjct: 146 RTTANNSKAVLNVCFSYTSRHEITTTIVNILENVKKGLIEPGDITEDMITNNLYTGDQPP 205
Query: 182 PDLIIRTGGEKRLSDFLLWQVA--YSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DL+IR+ G +R+SDFLLWQ + + I WP+F L +++ +R +G
Sbjct: 206 LDLLIRSSGVRRISDFLLWQCHQEHCDIEIIDTLWPEFGTMQMCLLLLKWSF-NRTYGRK 264
Query: 240 SKKG 243
+G
Sbjct: 265 KYRG 268
>gi|283954395|ref|ZP_06371915.1| undecaprenyl diphosphate synthase [Campylobacter jejuni subsp.
jejuni 414]
gi|283794012|gb|EFC32761.1| undecaprenyl diphosphate synthase [Campylobacter jejuni subsp.
jejuni 414]
Length = 222
Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats.
Identities = 76/227 (33%), Positives = 126/227 (55%), Gaps = 9/227 (3%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ ++MDGN RWA A+G G+ +G++ +++ E I NL++FAFS NW+RP
Sbjct: 5 KHLAVVMDGNRRWAKAKGFLAKLGYSQGVKTMQKLMEVCMEENISNLSLFAFSTENWKRP 64
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
EI + +L+ L + +KNN+ +R IG+ L+D + + E++T+ GL
Sbjct: 65 KDEIEFIFELLDRCLDEALEKFEKNNVSLRAIGDLSRLEDKLKEKIILVEEKTKHCNGLC 124
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+ +A +Y +RDEI RA K + + +++ + + LD S D DLI+R G
Sbjct: 125 VNLAISYGARDEIIRAAKRVIEKKL-------ELNEENLTQNLDLSL--DVDLILRVGNA 175
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
KRLS+FLLWQ +Y+E F +P ++ F + ++ R+R FG
Sbjct: 176 KRLSNFLLWQCSYAEIYFSETLFPSLTKREFKRIIKEFRNRERTFGK 222
>gi|156848547|ref|XP_001647155.1| hypothetical protein Kpol_1036p40 [Vanderwaltozyma polyspora DSM
70294]
gi|156117839|gb|EDO19297.1| hypothetical protein Kpol_1036p40 [Vanderwaltozyma polyspora DSM
70294]
Length = 291
Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats.
Identities = 72/228 (31%), Positives = 119/228 (52%), Gaps = 9/228 (3%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S+ P H+G +MDGN R+A + + GH G ++I+ E G++ T+FAFSI
Sbjct: 28 SNCVPKHVGFVMDGNRRYAKKKDIEIKEGHEAGFLSMSKILELCYESGVEITTVFAFSIE 87
Query: 67 NWRRPVSEISELVKLIKSFLK---KGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
N++R E+ L+KL ++ + +K I+VRVIG+ L D+L ++ A +
Sbjct: 88 NFKRSSKEVDHLMKLASDRIRQITEHGDLAEKYGIRVRVIGDLSLLPTDVLKDIELATEI 147
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N L I F Y+ R+EI ++K + ++ ++++ L+ L TS +P D
Sbjct: 148 TKNNNRATLNICFPYTGREEIFHSVKTVLSQ----NLSGNEINEKLLDSNLYTSGLPPLD 203
Query: 184 LIIRTGGEKRLSDFLLWQVAYS--EFVFIPEYWPDFSRELFFHALNQY 229
L++RT G RLSDF+LWQV + WP+F L ++
Sbjct: 204 LLVRTSGVTRLSDFMLWQVINHDVTIELLDCLWPEFGPIRMGWILLKF 251
>gi|153951523|ref|YP_001398259.1| undecaprenyl diphosphate synthase [Campylobacter jejuni subsp.
doylei 269.97]
gi|152938969|gb|ABS43710.1| undecaprenyl diphosphate synthase [Campylobacter jejuni subsp.
doylei 269.97]
Length = 222
Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats.
Identities = 73/227 (32%), Positives = 125/227 (55%), Gaps = 9/227 (3%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ ++MDGN RWA A+G G+ +G++ +++ E I NL++FAFS NW+RP
Sbjct: 5 KHLAVVMDGNRRWARAKGFLTKLGYSQGVKTMQKLMEVCMEENISNLSLFAFSTENWKRP 64
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
EI + +L+ L + +KNN+++R IG+ L+D + + E++T+ L
Sbjct: 65 KDEIDFIFELLDHCLDEALEKFEKNNVRLRAIGDLSRLEDKVREKITLVEEKTKHCDALC 124
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+ +A +Y +RDEI RA K + + +++ + + LD D DL++R G
Sbjct: 125 INLAISYGARDEIIRAAKRVIEKRL-------ELNEENLTQNLDLPL--DVDLMLRVGNA 175
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
KRLS+FLLWQ +Y+E F +P ++ F + ++ R+R FG
Sbjct: 176 KRLSNFLLWQCSYAEIYFSETLFPSLTKREFKRIIKEFRNRERTFGK 222
>gi|307111872|gb|EFN60106.1| hypothetical protein CHLNCDRAFT_29281 [Chlorella variabilis]
Length = 229
Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats.
Identities = 80/218 (36%), Positives = 119/218 (54%), Gaps = 4/218 (1%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGN RWAAAR P G+++G+E +V + LT++AFS NW RP +E+
Sbjct: 1 MDGNSRWAAARKRPAAFGYQQGVEALRSVVRCCHSWRVPCLTVYAFSAENWARPAAEVDA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ L++ L L +++R IG L + ++ AE T N+ L+L +A +
Sbjct: 61 LLALMERTLAAEVAELAAQGVRLRFIGELGMLPQSLQRQMRSAELATGDNSDLHLTVAVS 120
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLIIRTGGEKR 193
YS R +++ A++ I + G + DV +LI ++L T +P PDL+IRT GE+R
Sbjct: 121 YSGRQDVTLAVQEIARLAAGGELRPADVTPALIEQHLATRQLPHAWRHPDLLIRTSGERR 180
Query: 194 LSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
LS+FL W+ AYSE F WPDF + F AL Y
Sbjct: 181 LSNFLTWECAYSELYFSDVMWPDFGEKELFQALEDYAQ 218
>gi|83773873|dbj|BAE63998.1| unnamed protein product [Aspergillus oryzae]
Length = 273
Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats.
Identities = 73/236 (30%), Positives = 120/236 (50%), Gaps = 5/236 (2%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + P HI IMDGN R+A G+P GH G E + +V A G+K +T++
Sbjct: 24 INIIRRGPVPQHIAFIMDGNRRYAKGHGIPTAKGHYLGAEAMSNVVEACFLSGVKGVTVY 83
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFY---SLKKNNIKVRVIGNRLSLDDDILCVLK 118
AFS+ N++RP EI +L+ L K + + ++ + +RV+G LD+D+ +L+
Sbjct: 84 AFSLENFKRPKEEIVQLMNLFKFQIYELCKPGGLAERFQVSIRVLGQLDLLDEDLKALLR 143
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
+ TR TG + Y+SRDEI A+ S D+ ++ +Y+ T+D
Sbjct: 144 QIMVDTRNRTGGFINCCVAYTSRDEIVTAMSR-AVRSSQLKHSSADITDEVLTRYMYTAD 202
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFFHALNQYNLRD 233
P D+++RT G RLSDFLLWQ ++ + WP+F F + ++ +
Sbjct: 203 DPAVDVLVRTSGVSRLSDFLLWQCHEDTDIQIVDAMWPEFGIYHLFLVIVRWQRKQ 258
>gi|56206245|emb|CAI21497.1| dehydrodolichyl diphosphate synthase [Homo sapiens]
Length = 222
Score = 214 bits (546), Expect = 7e-54, Method: Composition-based stats.
Identities = 72/203 (35%), Positives = 111/203 (54%), Gaps = 6/203 (2%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IMDGN R+A + R GH +G E + +GI +T++AFS
Sbjct: 20 IKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSF---LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R SE+ L+ L + L + L+K+ + +RV+G+ L D+ ++ +A
Sbjct: 80 IENFKRSKSEVDGLMDLARQKFSRLMEEKEKLQKHGVCIRVLGDLHLLPLDLQELIAQAV 139
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVC---SHDVDSSLIAKYLDTSD 178
T+ L + F Y+SR EIS A++ + +E G + D+ SL+ K L T+
Sbjct: 140 QATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPRYPDDISESLLDKCLYTNR 199
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQ 201
P PD++IRT GE RLSDFLLWQ
Sbjct: 200 SPHPDILIRTSGEVRLSDFLLWQ 222
>gi|57237665|ref|YP_178913.1| undecaprenyl diphosphate synthase [Campylobacter jejuni RM1221]
gi|86150230|ref|ZP_01068457.1| undecaprenyl diphosphate synthase [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|86152074|ref|ZP_01070286.1| undecaprenyl diphosphate synthase [Campylobacter jejuni subsp.
jejuni 260.94]
gi|86153441|ref|ZP_01071645.1| undecaprenyl diphosphate synthase [Campylobacter jejuni subsp.
jejuni HB93-13]
gi|88597571|ref|ZP_01100805.1| undecaprenyl diphosphate synthase [Campylobacter jejuni subsp.
jejuni 84-25]
gi|121612397|ref|YP_001000509.1| undecaprenyl diphosphate synthase [Campylobacter jejuni subsp.
jejuni 81-176]
gi|157415091|ref|YP_001482347.1| undecaprenyl diphosphate synthase [Campylobacter jejuni subsp.
jejuni 81116]
gi|167005445|ref|ZP_02271203.1| putative undecaprenyl diphosphate synthase [Campylobacter jejuni
subsp. jejuni 81-176]
gi|218562452|ref|YP_002344231.1| undecaprenyl diphosphate synthase [Campylobacter jejuni subsp.
jejuni NCTC 11168]
gi|283957188|ref|ZP_06374652.1| undecaprenyl diphosphate synthase [Campylobacter jejuni subsp.
jejuni 1336]
gi|315124342|ref|YP_004066346.1| putative undecaprenyl diphosphate synthase [Campylobacter jejuni
subsp. jejuni ICDCCJ07001]
gi|42559890|sp|Q9PP99|UPPS_CAMJE RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|73920256|sp|Q5HUX2|UPPS_CAMJR RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|57166469|gb|AAW35248.1| undecaprenyl diphosphate synthase [Campylobacter jejuni RM1221]
gi|85839346|gb|EAQ56608.1| undecaprenyl diphosphate synthase [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|85840859|gb|EAQ58109.1| undecaprenyl diphosphate synthase [Campylobacter jejuni subsp.
jejuni 260.94]
gi|85843167|gb|EAQ60378.1| undecaprenyl diphosphate synthase [Campylobacter jejuni subsp.
jejuni HB93-13]
gi|87249397|gb|EAQ72357.1| undecaprenyl diphosphate synthase [Campylobacter jejuni subsp.
jejuni 81-176]
gi|88190163|gb|EAQ94138.1| undecaprenyl diphosphate synthase [Campylobacter jejuni subsp.
jejuni 84-25]
gi|112360158|emb|CAL34952.1| undecaprenyl diphosphate synthase [Campylobacter jejuni subsp.
jejuni NCTC 11168]
gi|157386055|gb|ABV52370.1| putative undecaprenyl diphosphate synthase [Campylobacter jejuni
subsp. jejuni 81116]
gi|283791364|gb|EFC30169.1| undecaprenyl diphosphate synthase [Campylobacter jejuni subsp.
jejuni 1336]
gi|284926069|gb|ADC28421.1| undecaprenyl diphosphate synthase [Campylobacter jejuni subsp.
jejuni IA3902]
gi|307747733|gb|ADN91003.1| Undecaprenyl pyrophosphate synthetase [Campylobacter jejuni subsp.
jejuni M1]
gi|315018064|gb|ADT66157.1| putative undecaprenyl diphosphate synthase [Campylobacter jejuni
subsp. jejuni ICDCCJ07001]
gi|315058274|gb|ADT72603.1| Undecaprenyl pyrophosphate synthetase [Campylobacter jejuni subsp.
jejuni S3]
gi|315928244|gb|EFV07560.1| di-trans,poly-cis-decaprenylcistransferase [Campylobacter jejuni
subsp. jejuni DFVF1099]
gi|315928908|gb|EFV08165.1| undecaprenyl diphosphate synthase [Campylobacter jejuni subsp.
jejuni 305]
Length = 222
Score = 214 bits (546), Expect = 7e-54, Method: Composition-based stats.
Identities = 73/227 (32%), Positives = 125/227 (55%), Gaps = 9/227 (3%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ ++MDGN RWA A+G G+ +G++ +++ E I NL++FAFS NW+RP
Sbjct: 5 KHLAVVMDGNRRWARAKGFLAKLGYSQGVKTMQKLMEVCMEENISNLSLFAFSTENWKRP 64
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
EI + +L+ L + +KNN+++R IG+ L+D + + E++T+ L
Sbjct: 65 KDEIDFIFELLDRCLDEALEKFEKNNVRLRAIGDLSRLEDKVREKITLVEEKTKHCDALC 124
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+ +A +Y +RDEI RA K + + +++ + + LD D DL++R G
Sbjct: 125 VNLAISYGARDEIIRAAKRVIEKKL-------ELNEENLTQNLDLPL--DVDLMLRVGNA 175
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
KRLS+FLLWQ +Y+E F +P ++ F + ++ R+R FG
Sbjct: 176 KRLSNFLLWQCSYAEIYFSETLFPSLTKREFKRIIKEFRNRERTFGK 222
>gi|108801101|ref|YP_641298.1| undecaprenyl pyrophosphate synthetase [Mycobacterium sp. MCS]
gi|108771520|gb|ABG10242.1| Undecaprenyl pyrophosphate synthetase [Mycobacterium sp. MCS]
Length = 246
Score = 214 bits (546), Expect = 7e-54, Method: Composition-based stats.
Identities = 80/226 (35%), Positives = 114/226 (50%), Gaps = 8/226 (3%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
S P HI ++ DGN RWA G G+R G E++ GI+ T++ S
Sbjct: 11 KSQLPRHIAVLCDGNRRWARDAGHDDVSYGYRVGAAKIAEMLRWCQAAGIEMATVYLLST 70
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
N +R E++EL+++I +++ N VR +G+ L D+ L++A + T
Sbjct: 71 ENLQRDADELAELIEIITGVVEE--ICAPANRWSVRTVGDLSLLGDEPARRLRDAVESTT 128
Query: 126 LN-TGLNLFIAFNYSSRDEISRAIK----NIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
N T ++ +A Y R EI A++ D +G V + I++ L TS P
Sbjct: 129 GNGTAFHVNVAVAYGGRQEIVDAVRALLSKKLADGVTGEQLVEAVTAEAISENLYTSGQP 188
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHAL 226
DPDL+IRT GE+RLS FLLWQ AYSE F YWP F R F AL
Sbjct: 189 DPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAYWPAFRRVDFLRAL 234
>gi|297282609|ref|XP_002802297.1| PREDICTED: dehydrodolichyl diphosphate synthase-like [Macaca
mulatta]
Length = 299
Score = 214 bits (546), Expect = 7e-54, Method: Composition-based stats.
Identities = 70/229 (30%), Positives = 110/229 (48%), Gaps = 37/229 (16%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IMDGN R+A + R GH +G E + +GI +T++AFS
Sbjct: 20 IKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSF---LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R SE+ L+ L + L + L+K+ + +RV+G+ L D+ ++ +A
Sbjct: 80 IENFKRSKSEVDGLMDLARQKFSRLMEEQEKLQKHGVCIRVLGDLHLLPLDLQELIAQAV 139
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T+ +D+ SL+ K L T+ P
Sbjct: 140 QATKNYN----------------------------------NDISESLLDKCLYTNRSPH 165
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
PD++IRT GE RLSDFLLWQ ++S VF P WP+++ F A+ Q+
Sbjct: 166 PDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQ 214
>gi|215445245|ref|ZP_03431997.1| Short (C15) chain Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T85]
gi|289757172|ref|ZP_06516550.1| short chain Z-Isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T85]
gi|289712736|gb|EFD76748.1| short chain Z-Isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T85]
Length = 263
Score = 214 bits (546), Expect = 7e-54, Method: Composition-based stats.
Identities = 74/238 (31%), Positives = 116/238 (48%), Gaps = 8/238 (3%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLP-RCAGHRKGIE-VFNEIVAAAAEVGIKNLTIFAFS 64
S P HI ++ DGN RW G+R + E++ E GI+ T++ S
Sbjct: 28 KSDLPRHIAVLCDGNRRWERRAAYHYVGYGYRDVVRPKIAEMLRWCHEAGIELATVYLLS 87
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
N +R E++ L+++I +++ N+ VR +G+ + ++ L+ A + T
Sbjct: 88 TENLQRDPDELAALIEIITDVVEE--ICAPANHWSVRTVGDLGLIGEEPARRLRGAVEST 145
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSDVP 180
++ +A Y R EI A++ + + + + V I++ L TS P
Sbjct: 146 PEVASFHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVDAVTVEGISENLYTSGQP 205
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DPDL+IRT GE+RLS FLLWQ AYSE F +WP F F AL Y+ R RR+G
Sbjct: 206 DPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDFLRALRDYSARHRRYGR 263
>gi|294656760|ref|XP_459077.2| DEHA2D13794p [Debaryomyces hansenii CBS767]
gi|199431722|emb|CAG87245.2| DEHA2D13794p [Debaryomyces hansenii]
Length = 347
Score = 214 bits (546), Expect = 8e-54, Method: Composition-based stats.
Identities = 80/231 (34%), Positives = 126/231 (54%), Gaps = 7/231 (3%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P H+G+IMDGN R+A + GH G E I+ E G++ T++AFS
Sbjct: 26 IQTGPTPRHVGMIMDGNRRYAKTHKIELKEGHNMGFESMANILELLYESGVECATVYAFS 85
Query: 65 INNWRRPVSEISELVKLIKSFLK---KGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R E++ L+ L KS K + ++ IK++++G+ L D+ +LKE E
Sbjct: 86 IENFKRSSYEVNWLMDLAKSKFKQISQNGELCEQYGIKIKILGSTELLPPDVYTILKETE 145
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ T+ NT L I F Y+SRDEI+ IKNI + + VD + + ++L TS+ P
Sbjct: 146 EITKDNTRAVLNICFPYTSRDEITSTIKNIVNESVQNND--FVVDENTVDRFLYTSNSPP 203
Query: 182 PDLIIRTGGEKRLSDFLLWQV--AYSEFVFIPEYWPDFSRELFFHALNQYN 230
D+++RT G RLSDFLLWQ + VF+ + WP+F L ++
Sbjct: 204 LDILLRTSGTFRLSDFLLWQCVSSSCSIVFVDKLWPEFGPWDMCKVLINWS 254
>gi|221041656|dbj|BAH12505.1| unnamed protein product [Homo sapiens]
Length = 299
Score = 214 bits (546), Expect = 8e-54, Method: Composition-based stats.
Identities = 70/229 (30%), Positives = 110/229 (48%), Gaps = 37/229 (16%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IMDGN R+A + R GH +G E + +GI +T++AFS
Sbjct: 20 IKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSF---LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R SE+ L+ L + L + L+K+ + +RV+G+ L D+ ++ +A
Sbjct: 80 IENFKRSKSEVDGLMDLARQKFSRLMEEKEKLQKHGVCIRVLGDLHLLPLDLQELIAQAV 139
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T+ +D+ SL+ K L T+ P
Sbjct: 140 QATKNYN----------------------------------NDISESLLDKCLYTNRSPH 165
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
PD++IRT GE RLSDFLLWQ ++S VF P WP+++ F A+ Q+
Sbjct: 166 PDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQ 214
>gi|163782041|ref|ZP_02177040.1| hypothetical protein HG1285_17949 [Hydrogenivirga sp. 128-5-R1-1]
gi|159882573|gb|EDP76078.1| hypothetical protein HG1285_17949 [Hydrogenivirga sp. 128-5-R1-1]
Length = 207
Score = 214 bits (546), Expect = 8e-54, Method: Composition-based stats.
Identities = 73/210 (34%), Positives = 120/210 (57%), Gaps = 6/210 (2%)
Query: 30 LPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKG 89
+PR GH +G EV EI A ++G++ LT+FAFS NW RP E+ L L++++L
Sbjct: 1 MPRIMGHYRGAEVAEEITKACIDIGVEYLTLFAFSTENWNRPKEEVELLFDLLRNYLTGK 60
Query: 90 FYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIK 149
L ++++ IG R + D+ +++E E T + + + +A +Y RD+I RA+
Sbjct: 61 KEELIDLGVRLKFIGRRDRIGKDLRLLMEELERDTSKDYRITVVLAVDYGGRDDILRAVN 120
Query: 150 NIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVF 209
+ + +D + +LD D+PDPDL+IRT GE+R+S+FLLW +AY+E F
Sbjct: 121 KLI------RLEFDHIDEDTFSHFLDLGDIPDPDLLIRTAGERRISNFLLWNLAYTELYF 174
Query: 210 IPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
WP+F+ E A+ ++ R R+FG +
Sbjct: 175 TEVCWPEFTVEELQRAIEDFSNRKRKFGRV 204
>gi|148926527|ref|ZP_01810209.1| putative undecaprenyl diphosphate synthase [Campylobacter jejuni
subsp. jejuni CG8486]
gi|205356324|ref|ZP_03223089.1| putative undecaprenyl diphosphate synthase [Campylobacter jejuni
subsp. jejuni CG8421]
gi|145845221|gb|EDK22315.1| putative undecaprenyl diphosphate synthase [Campylobacter jejuni
subsp. jejuni CG8486]
gi|205345709|gb|EDZ32347.1| putative undecaprenyl diphosphate synthase [Campylobacter jejuni
subsp. jejuni CG8421]
Length = 222
Score = 214 bits (545), Expect = 9e-54, Method: Composition-based stats.
Identities = 73/227 (32%), Positives = 124/227 (54%), Gaps = 9/227 (3%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ ++MDGN RWA A+G G+ +G++ +++ E I NL++FAFS NW+RP
Sbjct: 5 KHLAVVMDGNRRWARAKGFLAKLGYSQGVKTMQKLMEVCMEENISNLSLFAFSTENWKRP 64
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
EI + +L+ L + +KNN+++R IG+ L+D + + E++T+ L
Sbjct: 65 KDEIDFIFELLDRCLDEALEKFEKNNVRLRAIGDLSRLEDKVREKITLVEEKTKHCDALC 124
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+ +A +Y +RDEI RA K + +++ + + LD D DL++R G
Sbjct: 125 VNLAISYGARDEIIRAAKRAIEKKL-------ELNEENLTQNLDLPL--DVDLMLRVGNA 175
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
KRLS+FLLWQ +Y+E F +P ++ F + ++ R+R FG
Sbjct: 176 KRLSNFLLWQCSYAEIYFSETLFPSLTKREFKRIIKEFRNRERTFGK 222
>gi|119870242|ref|YP_940194.1| undecaprenyl pyrophosphate synthetase [Mycobacterium sp. KMS]
gi|119696331|gb|ABL93404.1| Undecaprenyl pyrophosphate synthetase [Mycobacterium sp. KMS]
Length = 263
Score = 214 bits (545), Expect = 9e-54, Method: Composition-based stats.
Identities = 80/226 (35%), Positives = 114/226 (50%), Gaps = 8/226 (3%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
S P HI ++ DGN RWA G G+R G E++ GI+ T++ S
Sbjct: 28 KSQLPRHIAVLCDGNRRWARDAGHDDVSYGYRVGAAKIAEMLRWCQAAGIEMATVYLLST 87
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
N +R E++EL+++I +++ N VR +G+ L D+ L++A + T
Sbjct: 88 ENLQRDADELAELIEIITGVVEE--ICAPANRWSVRTVGDLSLLGDEPARRLRDAVESTT 145
Query: 126 LN-TGLNLFIAFNYSSRDEISRAIK----NIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
N T ++ +A Y R EI A++ D +G V + I++ L TS P
Sbjct: 146 GNGTAFHVNVAVAYGGRQEIVDAVRALLSKKLADGVTGEQLVEAVTAEAISENLYTSGQP 205
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHAL 226
DPDL+IRT GE+RLS FLLWQ AYSE F YWP F R F AL
Sbjct: 206 DPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAYWPAFRRVDFLRAL 251
>gi|114554915|ref|XP_001144064.1| PREDICTED: similar to dehydrodolichyl diphosphate synthase isoform
10 [Pan troglodytes]
gi|332808106|ref|XP_001143548.2| PREDICTED: dehydrodolichyl diphosphate synthase isoform 3 [Pan
troglodytes]
Length = 299
Score = 214 bits (545), Expect = 9e-54, Method: Composition-based stats.
Identities = 70/229 (30%), Positives = 110/229 (48%), Gaps = 37/229 (16%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IMDGN R+A + R GH +G E + +GI +T++AFS
Sbjct: 20 IKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSF---LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R SE+ L+ L + L + L+K+ + +RV+G+ L D+ ++ +A
Sbjct: 80 IENFKRSKSEVDGLMDLARQKFSRLMEEQEKLQKHGVCIRVLGDLHLLPLDLQELIAQAV 139
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T+ +D+ SL+ K L T+ P
Sbjct: 140 QATKNYN----------------------------------NDISESLLDKCLYTNRSPH 165
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
PD++IRT GE RLSDFLLWQ ++S VF P WP+++ F A+ Q+
Sbjct: 166 PDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQ 214
>gi|118618530|ref|YP_906862.1| Z-decaprenyl diphosphate synthase [Mycobacterium ulcerans Agy99]
gi|183982599|ref|YP_001850890.1| Z-decaprenyl diphosphate synthase [Mycobacterium marinum M]
gi|118570640|gb|ABL05391.1| Z-decaprenyl diphosphate synthase [Mycobacterium ulcerans Agy99]
gi|183175925|gb|ACC41035.1| Z-decaprenyl diphosphate synthase [Mycobacterium marinum M]
Length = 230
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 82/233 (35%), Positives = 125/233 (53%), Gaps = 11/233 (4%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M + P ++ + DGNGRWAA RGL GH G EV V A E+G+ +++ FS
Sbjct: 1 MTARRFPLNVAVCPDGNGRWAAQRGLSAMEGHLAGGEVAFNRVRDACELGLTQFSLYGFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NW R +E+S L+ + + +G +L+ I+++V+G R+ L ++L + AE T
Sbjct: 61 TENWGRASAEVSGLMDIFSTLFDRGIQALEPLGIRLKVVGARVGLPHNVLDAIDRAEAAT 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N + LF+A NY R E+ A + + L ++ DPDL
Sbjct: 121 AHNDRMTLFVALNYGGRQEVLDAAERYTGGG-----------PEAFHRLLYAPEMQDPDL 169
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+IRTGG++RLS+ LW+ AYSE +F+ E WPDF+RE +AL ++ R R G
Sbjct: 170 VIRTGGDRRLSNGFLWESAYSELLFLDELWPDFTREHLENALIEFGQRVRTLG 222
>gi|221046358|dbj|BAH14856.1| unnamed protein product [Homo sapiens]
Length = 299
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 70/229 (30%), Positives = 110/229 (48%), Gaps = 37/229 (16%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IMDGN R+A + R GH +G E + +GI +T++AFS
Sbjct: 20 IKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSF---LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R SE+ L+ L + L + L+K+ + +RV+G+ L D+ ++ +A
Sbjct: 80 IENFKRSKSEVDGLMDLARQKFSRLMEEKEKLQKHGVCIRVLGDLHLLPLDLQELIAQAV 139
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T+ +D+ SL+ K L T+ P
Sbjct: 140 QATKNYN----------------------------------NDISESLLDKCLYTNRSPH 165
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
PD++IRT GE RLSDFLLWQ ++S VF P WP+++ F A+ Q+
Sbjct: 166 PDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQ 214
>gi|188583733|ref|YP_001927178.1| undecaprenyl pyrophosphate synthase [Methylobacterium populi BJ001]
gi|179347231|gb|ACB82643.1| undecaprenyl diphosphate synthase [Methylobacterium populi BJ001]
Length = 236
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 98/228 (42%), Positives = 131/228 (57%), Gaps = 11/228 (4%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H IIMDGNGRWA ARGLPR AGHR G++ ++ AA +GI LT++AFS +NWRRP
Sbjct: 12 HAAIIMDGNGRWARARGLPRGAGHRAGVKAIQQVAEAAPALGIGTLTLYAFSSDNWRRPA 71
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E+ L++L++++L+ L ++ ++ VIG R L I + AE T LNL
Sbjct: 72 EEVGGLMRLLRAYLRGETERLARSGTRLTVIGRRDRLPAGIPEAIARAEAATEAGDRLNL 131
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
IA +YSSRD I A + + +++ L D DL+IRTGGEK
Sbjct: 132 RIAVDYSSRDAILAAAARLG---------PEGLSRDAMSEALCGPG--DVDLLIRTGGEK 180
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RLSDFLLW+ AY+E F WPDF A+ + RDRRFGGL+
Sbjct: 181 RLSDFLLWEAAYAELHFTERMWPDFEAADLAAAVADFAARDRRFGGLN 228
>gi|126436939|ref|YP_001072630.1| undecaprenyl pyrophosphate synthetase [Mycobacterium sp. JLS]
gi|126236739|gb|ABO00140.1| Undecaprenyl pyrophosphate synthetase [Mycobacterium sp. JLS]
Length = 263
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 80/226 (35%), Positives = 114/226 (50%), Gaps = 8/226 (3%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
S P HI ++ DGN RWA G G+R G E++ GI+ T++ S
Sbjct: 28 KSQLPRHIAVLCDGNRRWARDAGHDDVSYGYRVGAAKIAEMLRWCQAAGIEMATVYLLST 87
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
N +R E++EL+++I +++ N VR +G+ L D+ L++A + T
Sbjct: 88 ENLQRDADELAELIEIITGVVEE--ICAPANRWSVRTVGDLSLLGDEPARRLRDAVESTT 145
Query: 126 LN-TGLNLFIAFNYSSRDEISRAIK----NIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
N T ++ +A Y R EI A++ D +G V + I++ L TS P
Sbjct: 146 GNGTAFHVNVAVAYGGRQEIVDAVRALLSKKLADGVTGEKLVEAVTAEAISENLYTSGQP 205
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHAL 226
DPDL+IRT GE+RLS FLLWQ AYSE F YWP F R F AL
Sbjct: 206 DPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAYWPAFRRVDFLRAL 251
>gi|326480880|gb|EGE04890.1| prenyltransferase [Trichophyton equinum CBS 127.97]
Length = 292
Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 68/241 (28%), Positives = 113/241 (46%), Gaps = 21/241 (8%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ +MDGN R+A +G+ R GH G E +I+ GIK +TI
Sbjct: 31 LIGALRQGPIPQHVAFVMDGNRRFARNQGIERVEGHNLGFEALAKILEVCYSSGIKVVTI 90
Query: 61 FAFSINNWRRPVSEISELVKLIKSF---LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+++ K L + L++ VRV+G R + D+L +
Sbjct: 91 YAFSIENFKRSKYEVDALMEMAKLKLLQLSEHGELLERYGASVRVLGRRDQIRPDVLEAV 150
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+ T N L I F + + + ++ ++ T+
Sbjct: 151 DRTVELTSGNGDAILNICFP-----------------DQLLFHSPETITTQTLSDHMLTA 193
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
P D++IRT G +RLSDF+LWQ ++ VF+ WP FS F + + R R+
Sbjct: 194 GCPPLDILIRTSGVERLSDFMLWQCHQDTQIVFLDTLWPAFSLWEFLPVIWDWQRRIRKT 253
Query: 237 G 237
G
Sbjct: 254 G 254
>gi|294882917|ref|XP_002769885.1| Dehydrodolichyl diphosphate synthase, putative [Perkinsus marinus
ATCC 50983]
gi|239873698|gb|EER02603.1| Dehydrodolichyl diphosphate synthase, putative [Perkinsus marinus
ATCC 50983]
Length = 409
Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 74/235 (31%), Positives = 122/235 (51%), Gaps = 7/235 (2%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + + P+H+ IMDGN R+A + LP+ GHR G E +++ +G+K ++ +
Sbjct: 160 INVLKRGNVPNHVAFIMDGNRRYATSHHLPKVQGHRYGYEKLLQVLKWCLHLGVKYVSAY 219
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLK 118
FS++N+ R E++ L+ L S + L+++ I V+ G+ L DI
Sbjct: 220 TFSVDNFNRSREEVTYLMDLASSKFVELGKHNGFLEQHGICVKFWGDLSLLPTDIHQKCI 279
Query: 119 EAEDQTRLN-TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD--VDSSLIAKYLD 175
+ E++TR L + F+YSS+ EIS+A+ + + S + S I L
Sbjct: 280 QLEEKTRKYPARATLNLLFSYSSKLEISQAVDKAIEKKRAEQQQSQGTPLAWSDIESQLY 339
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFV-FIPEYWPDFSRELFFHALNQY 229
++ P PDLI+RT GE RLSDFLLWQ++ + F+ WPD + F L +Y
Sbjct: 340 SAGTPPPDLILRTSGETRLSDFLLWQISPETLICFVKPNWPDMTLLDFARCLMKY 394
>gi|323359457|ref|YP_004225853.1| undecaprenyl pyrophosphate synthase [Microbacterium testaceum
StLB037]
gi|323275828|dbj|BAJ75973.1| undecaprenyl pyrophosphate synthase [Microbacterium testaceum
StLB037]
Length = 257
Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 77/242 (31%), Positives = 131/242 (54%), Gaps = 9/242 (3%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLP-RCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ M ++ P H+ +++DGN RWA G GHR G +E + ++GI +++
Sbjct: 18 LRRRMPATVPHHVAMMIDGNRRWARQLGYDSAAHGHRAGAAKMHEFLRWCDDLGIGVVSL 77
Query: 61 FAFSINNW-RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
+ S +N +R E+++L+++I ++ + + +V+ +G L ++ VL E
Sbjct: 78 YLLSNDNLVKRDSRELNDLLEIIAELAREL---SLEPDWRVQHVGRAEGLPTELADVLHE 134
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLD 175
++TR +TGL++ +A Y R EI A+++I ++ ++ I ++L
Sbjct: 135 VTERTRSHTGLHVNLAVGYGGRSEIVDAVRSIIAKHDASGGSLEELAASLTPEQIGEHLY 194
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
T DPDL+IRT GE+RLSDFLLWQ A+SEF F+ PD F A+ ++ RDRR
Sbjct: 195 TGGQADPDLVIRTSGEQRLSDFLLWQSAHSEFYFVEALGPDLREVDFLRAIRDFSARDRR 254
Query: 236 FG 237
FG
Sbjct: 255 FG 256
>gi|292656443|ref|YP_003536340.1| undecaprenyl diphosphate synthase [Haloferax volcanii DS2]
gi|291371400|gb|ADE03627.1| undecaprenyl diphosphate synthase [Haloferax volcanii DS2]
Length = 309
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 76/228 (33%), Positives = 115/228 (50%), Gaps = 4/228 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ II DGN R+A G GH+ G + +++ E+GI+ LT++ FS N+ R
Sbjct: 25 PTHVAIIQDGNRRYARKNGDDAPDGHKAGAQTTEDVLTWCEELGIEELTLYTFSTENFDR 84
Query: 71 PVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
P E L LI+ L + S + + VR IG L D + ++ AE +T
Sbjct: 85 PEHERGPLFDLIEDKLYEFADSERVHDREVAVRAIGEVHLLPDRVRDAVEYAESRTADYD 144
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
G L IA Y R E+ A +++ + +E G + +VD S + + L V D DLIIR
Sbjct: 145 GFTLNIALAYGGRAELLGAARDVCRAVERGDLSPDEVDVSAVDRRLSRKPVRDVDLIIRP 204
Query: 189 GGEKRLSDFLLWQVAYSE--FVFIPEYWPDFSRELFFHALNQYNLRDR 234
GG++R S+FL W +E F YWP+FS+ F + Y R++
Sbjct: 205 GGDERTSNFLPWHANGNEAAVYFCAPYWPEFSKVDFLRGIRTYESREQ 252
>gi|257387597|ref|YP_003177370.1| undecaprenyl diphosphate synthase [Halomicrobium mukohataei DSM
12286]
gi|257169904|gb|ACV47663.1| undecaprenyl diphosphate synthase [Halomicrobium mukohataei DSM
12286]
Length = 304
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 68/226 (30%), Positives = 110/226 (48%), Gaps = 4/226 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +I DGN R+A +G AG+ +G E ++ E+ + +T++ FS N+ R
Sbjct: 25 PSHVAVIQDGNRRYAREQGADTTAGYTEGAETTEALLHWCDELAVDEVTLYTFSTENFDR 84
Query: 71 PVSEISELVKLIKSFLK--KGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
P + L LI+ L+ + N +++R IG L + + + AE +T
Sbjct: 85 PKEQQEHLFDLIERKLRAFADTDRVHDNEVRIRAIGETERLPERVRDAIDYAESRTACYD 144
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
L L +A Y R E+ A ++I + ++ G + VD+ I L D DLI+RT
Sbjct: 145 RLQLNVALAYGGRAELLGATRDIARAVDDGELDPESVDADTIEGRLYEGPTRDVDLIVRT 204
Query: 189 GGEKRLSDFLLWQVAYSE--FVFIPEYWPDFSRELFFHALNQYNLR 232
GG++R S+FL W +E F YWP+F + F A+ Y R
Sbjct: 205 GGDERTSNFLPWHAKGNEAAVYFCAPYWPEFRKIDFLRAIRTYEHR 250
>gi|296416580|ref|XP_002837953.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633847|emb|CAZ82144.1| unnamed protein product [Tuber melanosporum]
Length = 267
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 74/240 (30%), Positives = 131/240 (54%), Gaps = 8/240 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+V ++ S P H+ +MDGN R+A + + GH G E + + + G+K +TI
Sbjct: 8 LVNALRQGSVPQHVAFVMDGNRRFARSNHIETVEGHNMGFEALAKAL--CYKAGVKVVTI 65
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++RP+ E++ L+++ K L + + + +R++G+R L D+L +
Sbjct: 66 YAFSIENFKRPLHEVNALMEIAKIKLSQLCQHGELMDRYGASLRILGHRSLLRQDVLEAI 125
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
++A + T+ N L + F Y+SRDE++ AI++I G + + I +++ TS
Sbjct: 126 EQATEMTKHNDKAILNVCFPYTSRDEMTTAIRDIT--ATPGLMDIESITEKTITQHMFTS 183
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
D P DL++RT G +RLSDF++WQ ++ VF WP F F L + ++ R+
Sbjct: 184 DCPPLDLLVRTSGVERLSDFMMWQCHQDTDIVFSDCLWPQFDIWKFLPILINWGVKRRKL 243
>gi|126179731|ref|YP_001047696.1| undecaprenyl diphosphate synthase [Methanoculleus marisnigri JR1]
gi|125862525|gb|ABN57714.1| Undecaprenyl pyrophosphate synthetase [Methanoculleus marisnigri
JR1]
Length = 259
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 72/230 (31%), Positives = 123/230 (53%), Gaps = 5/230 (2%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ +I DGN R+A +GL GHR G + +++ A E+G++++T++ FS N+R
Sbjct: 21 VPRHVAVIQDGNRRFAREQGLDTAIGHRLGADATEQVLDWACELGVQHITLYTFSTENFR 80
Query: 70 RPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
R +E+ L L + + +N I+V++IG+R L D++L + AE+ TR
Sbjct: 81 RDSAELESLFLLFREKFAAILRDKRVHRNRIRVQMIGDRSLLPDELLTTIDAAEEATRDY 140
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD-TSDVPDPDLII 186
+ + IA Y R+EI A ++I ++ G++ +D + + +L+ + +P DLII
Sbjct: 141 SDYFINIALAYGGRNEIVHAARSILDEVRQGAIDPAAIDPATVEAHLNRGAPIPPVDLII 200
Query: 187 RTGGEKRLSDFLLWQVAYSE--FVFIPEYWPDFSRELFFHALNQYNLRDR 234
RTG + R S+FL W E F +WP F + A+ Y+ R R
Sbjct: 201 RTGNDYRTSNFLPWLANGHESAVYFCAPFWPAFRKIDLLRAMRVYDQRMR 250
>gi|170103362|ref|XP_001882896.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164642267|gb|EDR06524.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 282
Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats.
Identities = 63/251 (25%), Positives = 115/251 (45%), Gaps = 20/251 (7%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + + P H+ +MDGN R+A + GH G ++ + ++ ++ +
Sbjct: 24 LRVLAAGPVPRHVAFVMDGNRRYARKQQKQVQEGHVDGYVALRRMLEVCLRLNVQCVSAY 83
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLK 118
AFSI N++R E+ L+KL + L + L + +++ V+G L + + ++
Sbjct: 84 AFSIENFKRSEDEVEALMKLAEEKLLELCEHGDILDEYGVRLNVLGRTSLLPEKVQLAVQ 143
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCS-------------HDV 165
+AE TR NT L + Y+SRDEI+ A+++ ++ + +
Sbjct: 144 KAEYMTRHNTRAILNLCMPYTSRDEITTAVESCVRNADPSNPIPATFAGPDRVPDHGSRC 203
Query: 166 DSSLIAKYLDTSD---VPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSREL 221
S ++ L D P D+++RT G KRLSDFLLWQ ++ +WPDF
Sbjct: 204 PSKTFSRQLYLHDRHPTPPLDILVRTSGVKRLSDFLLWQCCEDTQIQISSTFWPDFGLLD 263
Query: 222 FFHALNQYNLR 232
F + + +
Sbjct: 264 FVPIILDFQRK 274
>gi|86475811|dbj|BAE78988.1| Probable short-chain Z-isoprenyl diphosphate synthase [Streptomyces
sp. KO-3988]
Length = 282
Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats.
Identities = 72/243 (29%), Positives = 114/243 (46%), Gaps = 7/243 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ + P H+ +++DGN RWA G G+R G + + I+++T
Sbjct: 42 LARKLEGRPRPRHVAVMLDGNRRWARGAGHDDVREGYRVGGAKVGDFLRWCDASDIEHVT 101
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
++ S +N P +E+ L+++I+ + + ++ VIG L + LK+
Sbjct: 102 LWMLSDDNLSAPPAELGPLLEIIEETVAS--ICAADEDWQIEVIGALDLLPGETARTLKD 159
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCS----HDVDSSLIAKYLD 175
A +T +GL + +A Y R E+ A+K+ F +G + D I L
Sbjct: 160 AVARTTGRSGLKVDVAVGYGGRREVVDAVKSAFDKHIAGGGDPRELAENFDLQHITDNLY 219
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
+ D D IIRT GE+RLS FLLWQ AY+E F+ WP F + AL Y RDRR
Sbjct: 220 SPAGHDTDFIIRTSGEQRLSGFLLWQSAYAEVHFVEVLWPAFRQIDLLRALRSYADRDRR 279
Query: 236 FGG 238
+G
Sbjct: 280 YGR 282
>gi|284043427|ref|YP_003393767.1| undecaprenyl diphosphate synthase [Conexibacter woesei DSM 14684]
gi|283947648|gb|ADB50392.1| undecaprenyl diphosphate synthase [Conexibacter woesei DSM 14684]
Length = 221
Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats.
Identities = 81/221 (36%), Positives = 122/221 (55%), Gaps = 12/221 (5%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+ P + II DGNGRWA RGLP GHR G E + AAE+GI+ L+I+AFS N
Sbjct: 6 APAPATVAIITDGNGRWAQQRGLPVWEGHRAGAENVRSRLRDAAELGIEQLSIYAFSTEN 65
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRL-SLDDDILCVLKEAEDQTRL 126
W R EI+ L+ L++ +++ +L +++R IG R + D++ ++ AE T+
Sbjct: 66 WTRDDDEIAALMGLMRLYIEHETPTLHAEGVRMRFIGRRTAPVPRDVVELMSWAERLTQH 125
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N + FI FNY R EI A ++ + A L ++ P+++I
Sbjct: 126 NRRITFFIPFNYGGRAEIVDAARSF-----------TGTTEAEFAAQLYAPELRPPEVVI 174
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALN 227
RTGGE+R+S++L+W +A S+ VF E WPDF+RE AL
Sbjct: 175 RTGGERRISNYLIWHIATSQLVFRDELWPDFTREALLDALA 215
>gi|190344687|gb|EDK36415.2| hypothetical protein PGUG_00513 [Meyerozyma guilliermondii ATCC
6260]
Length = 317
Score = 212 bits (539), Expect = 5e-53, Method: Composition-based stats.
Identities = 72/231 (31%), Positives = 122/231 (52%), Gaps = 10/231 (4%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P H+ IIMDGN R+A + + GH G E ++ E G++ T++AFS
Sbjct: 26 IQTGPVPKHVAIIMDGNRRYARSHKMEIREGHNIGFETMASVLELLFEAGVECATVYAFS 85
Query: 65 INNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R E+ L+ + + +++ +K +++RV+GNR L D+ +++E E
Sbjct: 86 IENFKRSAYEVEALMDMARSRLCQIRQHGELCEKYGVRLRVVGNRKLLPVDVQQIVQETE 145
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
D T+ NT L++ F Y++RD+++++I+N+ + ++ S +L T P
Sbjct: 146 DMTKNNTRAVLYMCFPYTARDDMTQSIRNVVAESLINP--EFEISESAFNHFLYT---PP 200
Query: 182 PDLIIRTGGEKRLSDFLLWQVAY--SEFVFIPEYWPDFSRELFFHALNQYN 230
DL+IRT G RLSDFLLWQ VF WP+FS L ++
Sbjct: 201 LDLLIRTSGTYRLSDFLLWQSVSPKCSVVFSDRLWPEFSPLHMAKILLNWS 251
>gi|332016625|gb|EGI57496.1| Dehydrodolichyl diphosphate synthase [Acromyrmex echinatior]
Length = 435
Score = 211 bits (538), Expect = 7e-53, Method: Composition-based stats.
Identities = 80/207 (38%), Positives = 113/207 (54%), Gaps = 3/207 (1%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ I DGN R+A L R G+ KG+ N I+ +GI TI+ FSI N++
Sbjct: 1 MPKHVAFITDGNRRYANKYNLSRREGYLKGLNKINNILNWCMHLGIVETTIYLFSITNFK 60
Query: 70 RPVSEISELVKLIKSFLKKGFY---SLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
R EI L+ +IK K LK N I VRVIGN L +D+ ++ E T
Sbjct: 61 RSKKEIDNLMDIIKQLFKSLLENKEKLKDNGICVRVIGNLSLLSEDLNKLIAEVMIVTGE 120
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N + + A Y+SRDEI+ AIK+I Q +++ + D++ LI L T P+PDL+I
Sbjct: 121 NNRIFINFAVAYTSRDEITHAIKDIIQGVKNTDILPEDINEDLITDCLYTYKSPNPDLLI 180
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEY 213
RT GE RLSDFL+WQ++ + F +
Sbjct: 181 RTSGENRLSDFLMWQISSTCIYFAKTF 207
>gi|56206244|emb|CAI21496.1| dehydrodolichyl diphosphate synthase [Homo sapiens]
Length = 216
Score = 211 bits (538), Expect = 7e-53, Method: Composition-based stats.
Identities = 71/226 (31%), Positives = 106/226 (46%), Gaps = 36/226 (15%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IMDGN R+A + R GH +G E + +GI +T++AFS
Sbjct: 20 IKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
I N++R SE+ L+ L + +
Sbjct: 80 IENFKRSKSEVDGLMDLARQKFSRLMEE-------------------------------- 107
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
L + F Y+SR EIS A++ + +E G + D+ SL+ K L T+ P PD+
Sbjct: 108 ----KCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDISESLLDKCLYTNRSPHPDI 163
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
+IRT GE RLSDFLLWQ ++S VF P WP+++ F A+ Q+
Sbjct: 164 LIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQ 209
>gi|241950137|ref|XP_002417791.1| dehydrodolichyl diphosphate synthetase, putative [Candida
dubliniensis CD36]
gi|223641129|emb|CAX45505.1| dehydrodolichyl diphosphate synthetase, putative [Candida
dubliniensis CD36]
Length = 314
Score = 211 bits (537), Expect = 7e-53, Method: Composition-based stats.
Identities = 79/237 (33%), Positives = 125/237 (52%), Gaps = 8/237 (3%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
++ + + P HI +IMDGN +A LP GH G +++ +VGI+ +TI+
Sbjct: 37 ISIIKTGPIPKHIAMIMDGNRTYAKKHRLPLKEGHFAGANALVKVLEVCYKVGIEQVTIY 96
Query: 62 AFSINNWRRPVSEISELVKLIKSFLK---KGFYSLKKNN-IKVRVIGNRLSLDDDILCVL 117
AFS+ N+ R E+ L L++ LK + S + N +++R+IGNR + +DIL L
Sbjct: 97 AFSLENFNRSKEEVDTLFALLRDKLKVMSEHEDSYARYNKVRIRIIGNRSFIPEDILKDL 156
Query: 118 KEAEDQTRL-NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCS-HDVDSSLIAKYLD 175
+ E+ T+ + L + F Y++RDEI+ A+K+I SG + + + + + I K
Sbjct: 157 ENVEETTKDFGSKKTLNVCFPYTARDEITYAVKSIASKRVSGELNNRNKITTKTIEKNFY 216
Query: 176 TS-DVPDPDLIIRTGGEKRLSDFLLWQV-AYSEFVFIPEYWPDFSRELFFHALNQYN 230
DVP D++IRT G RLSDFLLWQ F WPDF L +++
Sbjct: 217 FGDDVPPLDILIRTSGHTRLSDFLLWQCTTECTIEFPDVLWPDFGFISIMSILFKWS 273
>gi|302504363|ref|XP_003014140.1| hypothetical protein ARB_07445 [Arthroderma benhamiae CBS 112371]
gi|291177708|gb|EFE33500.1| hypothetical protein ARB_07445 [Arthroderma benhamiae CBS 112371]
Length = 306
Score = 211 bits (537), Expect = 7e-53, Method: Composition-based stats.
Identities = 68/238 (28%), Positives = 125/238 (52%), Gaps = 5/238 (2%)
Query: 1 MVASMMSSSP-PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
++ ++ P P HI II DGN RWA + + GH+ G + ++I+ + G++ +T
Sbjct: 19 LLMNIAQQGPVPKHIAIIADGNRRWAKSSEINVKRGHQMGAKNLDDILDLFFDTGVECVT 78
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGF-YSLKKNNIKVRVIGNRLSLDDDILCVLK 118
+ FSI N++RP ++ +L+ + + +++K S K I+ RV+G L + I ++K
Sbjct: 79 AYLFSIENFKRPKEQVDDLMDISEIWVQKYLSRSPNKRKIRFRVLGRLELLPEKIRKLIK 138
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSH--DVDSSLIAKYLDT 176
+ ++T L + F+Y+SRDE++RAI+ ++ ++ + I +D
Sbjct: 139 KLVEKTADYDEGTLNVCFSYTSRDEMARAIEMTVRNHNDSPKNGERGNITAETIDNNMDI 198
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFV-FIPEYWPDFSRELFFHALNQYNLRD 233
+ P D++IRT G RLSDFLLWQ + + +WP+F F A+ + +
Sbjct: 199 CNDPPLDVLIRTSGVCRLSDFLLWQCHRDTVIEVLDIHWPEFRYWHLFLAVLGWQRKK 256
>gi|296207143|ref|XP_002750514.1| PREDICTED: dehydrodolichyl diphosphate synthase isoform 3
[Callithrix jacchus]
Length = 294
Score = 210 bits (536), Expect = 9e-53, Method: Composition-based stats.
Identities = 71/226 (31%), Positives = 106/226 (46%), Gaps = 36/226 (15%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IMDGN R+A + R GH +G E + +GI +T++AFS
Sbjct: 20 IKAGPVPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
I N++R SE+ L+ L + +
Sbjct: 80 IENFKRSKSEVDGLMDLARQKFSRLMEE-------------------------------- 107
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
L + F Y+SR EIS A++ + +E G + D+ SL+ K L T+ P PD+
Sbjct: 108 ----QCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDISESLLDKCLYTNRSPHPDI 163
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
+IRT GE RLSDFLLWQ ++S VF P WP+++ F A+ Q+
Sbjct: 164 LIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQ 209
>gi|308812834|ref|XP_003083724.1| MGC52912 protein (ISS) [Ostreococcus tauri]
gi|116055605|emb|CAL58273.1| MGC52912 protein (ISS) [Ostreococcus tauri]
Length = 298
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 66/236 (27%), Positives = 115/236 (48%), Gaps = 6/236 (2%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
A++ P H+ +IMDGN R A RG GHR G E + ++G+K L+++
Sbjct: 22 CAALRRRGVPGHVAVIMDGNRRHARRRGASATVGHRAGAETLSAACEWCFDLGVKVLSVY 81
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFY--SLKKNNIKVRVIGNRLSLDDDILCVLKE 119
A S N+ R E+ L +L L+ L ++ +V V G+ +L +
Sbjct: 82 ALSTENFGRAEDELDGLFELATERLEMLGKDARLARHRARVTVSGDLNALPKAVREAAMA 141
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD---- 175
+ T N G L + Y+ R++++RAI +++++G + + DV+ + + L
Sbjct: 142 VMEATAANDGPILNVCMAYTGREDLARAIVETRKEVKAGRLDASDVNERALERRLYGQSG 201
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
+ +P DL++RT GE RLSD++L ++ VF WPDF+ A+ +Y
Sbjct: 202 GAPLPAVDLLVRTSGETRLSDYMLMNCRFAALVFTETLWPDFTFWDMVDAVWRYQR 257
>gi|308457866|ref|XP_003091294.1| hypothetical protein CRE_01415 [Caenorhabditis remanei]
gi|308257399|gb|EFP01352.1| hypothetical protein CRE_01415 [Caenorhabditis remanei]
Length = 317
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 78/247 (31%), Positives = 118/247 (47%), Gaps = 21/247 (8%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGL-PRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ S P H+ +MDGN R+A ++ L GH KG +I+ GI+ +T++AF
Sbjct: 31 IASGPIPRHVAFVMDGNRRFAKSKHLGNVIKGHEKGFVQLAKILDWCNRFGIREITVYAF 90
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
SI N++R E+S L++L + +K L + I R GNR L + ++ +
Sbjct: 91 SIENFKRSEDEVSGLMRLAEEKFQKLLNDSEKLDEKRICFRFYGNRSLLSSRLQKLMSDI 150
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD---------------- 164
E +T G L + Y+SRDEI+R+ + I ++ G V D
Sbjct: 151 EKRTEKFDGGRLNVCMPYTSRDEITRSFETIRNHVKEGKVDVDDVSEYFLNILKKCGKFQ 210
Query: 165 VDSSLIAKYLDT-SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFF 223
++ S+I LD+ PDL IRT GE RLSDFL+WQ A + F WP+F
Sbjct: 211 INESMIDACLDSGCGGTVPDLFIRTSGEHRLSDFLMWQAADTHVYFDDVLWPEFGYYNLC 270
Query: 224 HALNQYN 230
A+ Y
Sbjct: 271 KAILNYQ 277
>gi|117626790|gb|ABK51403.1| LLA-66 [Lilium longiflorum]
Length = 308
Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats.
Identities = 65/245 (26%), Positives = 110/245 (44%), Gaps = 9/245 (3%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A + P HI I+DGN R+ L H G I+ E+G++ +T++A
Sbjct: 35 AVLSVGPMPRHIAFILDGNRRYGKKWKLKEGESHNIGFLTLVRILRYCCEMGVEYVTLYA 94
Query: 63 FSINNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
FSI+N+ R +E+ ++ LI+ L + ++ + ++V IG LD + +
Sbjct: 95 FSIDNFNRKPNEVQYVMNLIRENTQALVRDLDTVNRLGVRVNFIGRLDLLDGPLREAART 154
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIE---SGSVCSHDVDSSLIAKYLDT 176
T NT + L++ Y+S +EI ++ +D ++ + +
Sbjct: 155 VMKATAGNTRIVLWVCTAYTSTEEIVHGVQGAVEDEWARLRMEGTKREISLEDLEGKMYF 214
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
PDPD++IRT GE RLS+F+LWQ ++ WPD S A+ Y R +
Sbjct: 215 ERNPDPDILIRTSGETRLSNFVLWQTSFCLLYAPRCLWPDLSLRHLVWAVLLYQ---RSY 271
Query: 237 GGLSK 241
L K
Sbjct: 272 AYLEK 276
>gi|45190609|ref|NP_984863.1| AER003Cp [Ashbya gossypii ATCC 10895]
gi|44983588|gb|AAS52687.1| AER003Cp [Ashbya gossypii ATCC 10895]
Length = 274
Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats.
Identities = 76/229 (33%), Positives = 112/229 (48%), Gaps = 8/229 (3%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S P H+G IMDGN R+A + GH G N+++ E G+ T+FAFS++
Sbjct: 28 SGRVPKHVGFIMDGNRRYAKKHNIEVREGHSAGFMSMNKVLELCYESGVTTATVFAFSVD 87
Query: 67 NWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
N+RR E+ L++L K + + ++ I VR+IG+R L D+ + AE
Sbjct: 88 NFRRSAFEVDSLMELAKERVMQITQHGELAEQYGIHVRIIGDRSLLPADVQEEMARAEKA 147
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T NT L + Y++R EI A+K D +S + + + ++ T +P D
Sbjct: 148 TEANTRAVLNVCIPYTARGEILHAMKGTIADAQSDGAP---ITEADLDAHMYTGGLPPLD 204
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVF--IPEYWPDFSRELFFHALNQYN 230
L+IRT G RLSDFLLWQV V + WPDF L +Y
Sbjct: 205 LLIRTSGVSRLSDFLLWQVCQKGVVIELLSCLWPDFGPLTMAWILLRYA 253
>gi|13278672|gb|AAH04117.1| DHDDS protein [Homo sapiens]
gi|119628213|gb|EAX07808.1| dehydrodolichyl diphosphate synthase, isoform CRA_c [Homo sapiens]
gi|119628214|gb|EAX07809.1| dehydrodolichyl diphosphate synthase, isoform CRA_c [Homo sapiens]
Length = 294
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 71/226 (31%), Positives = 106/226 (46%), Gaps = 36/226 (15%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IMDGN R+A + R GH +G E + +GI +T++AFS
Sbjct: 20 IKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
I N++R SE+ L+ L + +
Sbjct: 80 IENFKRSKSEVDGLMDLARQKFSRLMEE-------------------------------- 107
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
L + F Y+SR EIS A++ + +E G + D+ SL+ K L T+ P PD+
Sbjct: 108 ----KCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDISESLLDKCLYTNRSPHPDI 163
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
+IRT GE RLSDFLLWQ ++S VF P WP+++ F A+ Q+
Sbjct: 164 LIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQ 209
>gi|328856647|gb|EGG05767.1| hypothetical protein MELLADRAFT_87649 [Melampsora larici-populina
98AG31]
Length = 271
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 76/248 (30%), Positives = 124/248 (50%), Gaps = 16/248 (6%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ ++ P H+G IMDGN R++ G+P GH G E ++ + + N+T++
Sbjct: 15 IQTLKQGPTPRHVGFIMDGNRRFSRTNGVPVEEGHMAGFEALKRVLELLLRLEVPNVTVY 74
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLK 118
AF+I+N+ RP E+S+L+ + ++ L + L + I+V VIG + L DI +
Sbjct: 75 AFAIDNFNRPAHEVSKLMDMARTKLIEICERGQLLDRYGIRVVVIGRKDLLPADIQNSVA 134
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
+ E T NT L +AF YSS++E++ A+ QD S + + +D I K++ TS
Sbjct: 135 KVESMTAHNTRGCLNVAFPYSSQEEMATALCRTVQDSISQNQPTSMIDIETIGKHIYTSH 194
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEF-------------VFIPEYWPDFSRELFFHA 225
P D+++RT G +RLSDFLLWQ F+ YWPDF
Sbjct: 195 SPPLDILVRTSGVRRLSDFLLWQTTLDTMKTSSKIEALGPSVHFVDRYWPDFGILDVLPI 254
Query: 226 LNQYNLRD 233
+ + +
Sbjct: 255 ILGWQAEE 262
>gi|254577167|ref|XP_002494570.1| ZYRO0A04598p [Zygosaccharomyces rouxii]
gi|238937459|emb|CAR25637.1| ZYRO0A04598p [Zygosaccharomyces rouxii]
Length = 285
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 73/233 (31%), Positives = 118/233 (50%), Gaps = 9/233 (3%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
+S+S P H+G +MDGN R+A + GH G ++++ + G+ T+FAFSI
Sbjct: 28 VSNSAPKHVGFVMDGNRRYAKKMDIEVKEGHEAGYMSMSKVLELCYQAGVDTATVFAFSI 87
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
N++R E+ L++L + +++ +K I+V+VIG+ L DI +K D
Sbjct: 88 ENFKRSSLEVDNLMQLARERIRQLADKGELAEKYGIRVKVIGDLTLLPKDIYKEVKRTTD 147
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T+ NT L I F Y+ R+EI ++K + + ++ + K+L T D P
Sbjct: 148 LTKNNTRATLNICFPYTGREEIFHSVKELISEDVPI----DSINEICLEKHLYTGDSPPL 203
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVF--IPEYWPDFSRELFFHALNQYNLRD 233
DL++RT G RLSDF+LWQ + V I WP+F L ++ R
Sbjct: 204 DLLVRTSGVSRLSDFMLWQASNKGVVIELIDRLWPEFGPLNMAWILLKFAFRK 256
>gi|108999735|ref|XP_001109446.1| PREDICTED: dehydrodolichyl diphosphate synthase-like isoform 4
[Macaca mulatta]
Length = 294
Score = 209 bits (533), Expect = 3e-52, Method: Composition-based stats.
Identities = 71/226 (31%), Positives = 106/226 (46%), Gaps = 36/226 (15%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IMDGN R+A + R GH +G E + +GI +T++AFS
Sbjct: 20 IKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
I N++R SE+ L+ L + +
Sbjct: 80 IENFKRSKSEVDGLMDLARQKFSRLMEE-------------------------------- 107
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
L + F Y+SR EIS A++ + +E G + D+ SL+ K L T+ P PD+
Sbjct: 108 ----QCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDISESLLDKCLYTNRSPHPDI 163
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
+IRT GE RLSDFLLWQ ++S VF P WP+++ F A+ Q+
Sbjct: 164 LIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQ 209
>gi|254456397|ref|ZP_05069826.1| undecaprenyl pyrophosphate synthetase 1 [Candidatus Pelagibacter
sp. HTCC7211]
gi|207083399|gb|EDZ60825.1| undecaprenyl pyrophosphate synthetase 1 [Candidatus Pelagibacter
sp. HTCC7211]
Length = 214
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 83/222 (37%), Positives = 126/222 (56%), Gaps = 8/222 (3%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRW + R AGH+ G++ I+ + E IK LT+FAFS NW+RP EI
Sbjct: 1 MDGNGRWGLKQKKSRNAGHKAGLKSVERIIKKSIEYNIKFLTLFAFSTENWKRPKKEIDY 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L L++SFL K +IK +VIG + + + +L AE +T N+ + + +A N
Sbjct: 61 LFNLLESFLISRIDEFDKQDIKFKVIGKK-NFSKKLNLLLNSAEKKTSKNSKIQINLALN 119
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y S+ E+ A + + ++D I K+L T ++P+PD++IRTG KRLS+F
Sbjct: 120 YGSKFELVNA-------FKKIIKNNINIDEKNIEKFLYTKNIPNPDILIRTGNTKRLSNF 172
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
LLWQ+AYSE F + WPDF+ + +N++ R +G +
Sbjct: 173 LLWQIAYSEIFFEKKLWPDFNETDYSKIINKFKKVKRNYGNI 214
>gi|114554919|ref|XP_001143406.1| PREDICTED: dehydrodolichyl diphosphate synthase isoform 2 [Pan
troglodytes]
gi|114554921|ref|XP_001144219.1| PREDICTED: dehydrodolichyl diphosphate synthase isoform 11 [Pan
troglodytes]
Length = 294
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 71/226 (31%), Positives = 106/226 (46%), Gaps = 36/226 (15%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IMDGN R+A + R GH +G E + +GI +T++AFS
Sbjct: 20 IKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
I N++R SE+ L+ L + +
Sbjct: 80 IENFKRSKSEVDGLMDLARQKFSRLMEE-------------------------------- 107
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
L + F Y+SR EIS A++ + +E G + D+ SL+ K L T+ P PD+
Sbjct: 108 ----QCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDISESLLDKCLYTNRSPHPDI 163
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
+IRT GE RLSDFLLWQ ++S VF P WP+++ F A+ Q+
Sbjct: 164 LIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQ 209
>gi|126275948|ref|XP_001387164.1| cis-prenyltransferase involved in dolichol synthesis
[Scheffersomyces stipitis CBS 6054]
gi|126213033|gb|EAZ63141.1| cis-prenyltransferase involved in dolichol synthesis [Pichia
stipitis CBS 6054]
Length = 318
Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 74/237 (31%), Positives = 129/237 (54%), Gaps = 8/237 (3%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ M + P+H+ +IMDGN R++ A+ LP GH G E ++ +GI ++TI+
Sbjct: 39 IEVMKTGPIPNHVALIMDGNRRYSKAKNLPLKEGHISGAETLLTVLDVCYRLGIDHVTIY 98
Query: 62 AFSINNWRRPVSEISELVKLIKSFL----KKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
AFSI N+ R E+ L L++ + + + NN+++R+IGNR + DIL L
Sbjct: 99 AFSIENFNRSQEEVDTLFGLLRDKITQISEHEDSYARFNNVRIRIIGNRTYIPPDILADL 158
Query: 118 KEAEDQTRLNTG-LNLFIAFNYSSRDEISRAIKNIFQDIESGS-VCSHDVDSSLIAKYLD 175
+ AE T+ + L + F Y+SRD+I+ ++KNI + ++ ++ + +
Sbjct: 159 ERAELVTKDSKHNRTLNVCFPYTSRDDIAISMKNIAEKVQVQEIPSKDEITLQTLKENNY 218
Query: 176 T-SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFV-FIPEYWPDFSRELFFHALNQYN 230
+DVP+ D++IRT G RLSDF+LWQ ++ + F+ WPDF + +++
Sbjct: 219 FGADVPELDILIRTSGHTRLSDFMLWQANFNCMIEFVDTLWPDFKFFSITSVILKWS 275
>gi|77409697|ref|ZP_00786362.1| undecaprenyl diphosphate synthase [Streptococcus agalactiae COH1]
gi|77171695|gb|EAO74899.1| undecaprenyl diphosphate synthase [Streptococcus agalactiae COH1]
Length = 182
Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats.
Identities = 77/177 (43%), Positives = 102/177 (57%), Gaps = 4/177 (2%)
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
NW RP E+ ++ L F K L KNN++V+VIG+ L ++ A +T+
Sbjct: 6 NWSRPDDEVKFIMNLPVEFFDKYVPELDKNNVRVQVIGDTHKLPKATYDAMQRACLRTKH 65
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DP 182
N+GL L A NY R EI+ AIK I QD+ + D+ L+A +L T+ +P DP
Sbjct: 66 NSGLVLNFALNYGGRSEITNAIKEIAQDVLEAKLNPDDITEDLVANHLMTNSLPYLYRDP 125
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
DLIIRT GE RLS+FL WQ AYSEF F P WPDF ++ A+ YN R RRFG +
Sbjct: 126 DLIIRTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKDELHKAIVDYNQRHRRFGSV 182
>gi|302765779|ref|XP_002966310.1| hypothetical protein SELMODRAFT_230863 [Selaginella moellendorffii]
gi|300165730|gb|EFJ32337.1| hypothetical protein SELMODRAFT_230863 [Selaginella moellendorffii]
Length = 235
Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats.
Identities = 76/231 (32%), Positives = 125/231 (54%), Gaps = 9/231 (3%)
Query: 16 IIMDGNGRWAAARGLPRCAGHRKGIEVF----NEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+IMDGN RWA ARG+ + R E EIV +++ GIK LT+FAFS N+ RP
Sbjct: 1 MIMDGNSRWAKARGIAKEFQLRAAAEACYSNAREIVRLSSDWGIKALTLFAFSTENFLRP 60
Query: 72 VSEISELVKLIKSFLKKGFYS-LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ + ++ + L + + + I+ IG+ L + + EA+ T NTG+
Sbjct: 61 REEVDQWMQQFERVLSLDDPATMLLDGIQFHCIGDTARLPRTLQDKISEAQCITSGNTGM 120
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD----PDLII 186
+A Y ++ +A K + ++++ G + D+D +++ L + + P+L++
Sbjct: 121 KFVMAIGYGGHSDLVQACKALAREVQQGKLAVQDIDQINLSRRLMLGERCEDVGAPELLV 180
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE+RLS+F+LW +AYSE VF + WPDF E + +AL + R R G
Sbjct: 181 RTSGEQRLSNFMLWHLAYSELVFEKKLWPDFGEEEYKNALVAFQGRKRTLG 231
>gi|315053979|ref|XP_003176364.1| dehydrodolichyl diphosphate synthase [Arthroderma gypseum CBS
118893]
gi|311338210|gb|EFQ97412.1| dehydrodolichyl diphosphate synthase [Arthroderma gypseum CBS
118893]
Length = 305
Score = 208 bits (529), Expect = 6e-52, Method: Composition-based stats.
Identities = 70/244 (28%), Positives = 124/244 (50%), Gaps = 3/244 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+V+ + P HI II DGN R+A +RG GH G +V N ++ A E G++ +T
Sbjct: 20 LVSIVQQGPIPRHIAIIADGNRRYAKSRGFSIKKGHTLGADVLNNVLDLAFETGVEFITA 79
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF-YSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
+ FSI N++RP +++ +L+ L + ++ K S K ++ R +G + I ++K+
Sbjct: 80 YLFSIENFKRPKNQVDDLMGLFEIWILKCLYPSPNKRKLRFRFLGRLELFPNKIRKLMKK 139
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV 179
++T G I Y+SRDE++RAI+ ++ + + + ++ +D ++
Sbjct: 140 LVEKTANCDGATFNICVAYTSRDEMARAIETTVRNHNDSPQSENHITAEILDSNMDINEG 199
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFV-FIPEYWPDFSRELFFHALNQYNLRDR-RFG 237
D++IRT G RLSDFLLWQ + + WP F F + ++ + R G
Sbjct: 200 SPLDILIRTSGVGRLSDFLLWQCHRDTVIEVLDMQWPAFQYWDLFFVILRWQRKKMARMG 259
Query: 238 GLSK 241
+K
Sbjct: 260 FHTK 263
>gi|146422394|ref|XP_001487136.1| hypothetical protein PGUG_00513 [Meyerozyma guilliermondii ATCC
6260]
Length = 317
Score = 208 bits (529), Expect = 6e-52, Method: Composition-based stats.
Identities = 72/231 (31%), Positives = 121/231 (52%), Gaps = 10/231 (4%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P H+ IIMDGN R+A + + GH G E ++ E G++ T++AFS
Sbjct: 26 IQTGPVPKHVAIIMDGNRRYARSHKMEIREGHNIGFETMASVLELLFEAGVECATVYAFS 85
Query: 65 INNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R E+ L+ + + +++ +K +++RV+GNR L D+ +++E E
Sbjct: 86 IENFKRLAYEVEALMDMARLRLCQIRQHGELCEKYGVRLRVVGNRKLLPVDVQQIVQETE 145
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
D T+ NT L++ F Y++RD++++ I+N+ + ++ S +L T P
Sbjct: 146 DMTKNNTRAVLYMCFPYTARDDMTQLIRNVVAESLINP--EFEISESAFNHFLYT---PP 200
Query: 182 PDLIIRTGGEKRLSDFLLWQVAY--SEFVFIPEYWPDFSRELFFHALNQYN 230
DL+IRT G RLSDFLLWQ VF WP+FS L ++
Sbjct: 201 LDLLIRTSGTYRLSDFLLWQSVLPKCSVVFSDRLWPEFSPLHMAKILLNWS 251
>gi|260948780|ref|XP_002618687.1| hypothetical protein CLUG_02146 [Clavispora lusitaniae ATCC 42720]
gi|238848559|gb|EEQ38023.1| hypothetical protein CLUG_02146 [Clavispora lusitaniae ATCC 42720]
Length = 298
Score = 208 bits (529), Expect = 7e-52, Method: Composition-based stats.
Identities = 75/231 (32%), Positives = 126/231 (54%), Gaps = 7/231 (3%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P H+G+IMDGN R+A L GH G + ++ + G+++ T++AFS
Sbjct: 25 LQTGPTPRHVGVIMDGNRRFAREHKLEVKEGHSFGFDAMAAVLELLYQSGVEHATVYAFS 84
Query: 65 INNWRRPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I+N+RR E+ L+ L KS LK+ + I++RV+GN L D+ L++ E
Sbjct: 85 IDNFRRSRQEVDWLMDLAKSKLKQMAQHGELCDQYGIRIRVLGNVSLLPPDVRAALRDTE 144
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+T N+ L + F Y++RDE++ A++ + + C VD + + ++L T + P
Sbjct: 145 RRTAHNSRAVLNVCFPYTARDEMAHAVRAVVGAAAADPHC--KVDQAALERHLYTGEAPP 202
Query: 182 PDLIIRTGGEKRLSDFLLWQV--AYSEFVFIPEYWPDFSRELFFHALNQYN 230
DL++RT G RLSDFLLWQ + VF P+ WP+F+ L +++
Sbjct: 203 LDLLVRTSGTFRLSDFLLWQAVPSSCAVVFCPKLWPEFTAWDMCLILLRWS 253
>gi|126540559|emb|CAM46104.1| dehydrodolichyl diphosphate synthase [Mus musculus]
gi|126541191|emb|CAM46081.1| dehydrodolichyl diphosphate synthase [Mus musculus]
Length = 294
Score = 208 bits (529), Expect = 7e-52, Method: Composition-based stats.
Identities = 73/237 (30%), Positives = 108/237 (45%), Gaps = 39/237 (16%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IMDGN R+A + R GH +G E + +GI +T++AFS
Sbjct: 20 IKAGPVPKHIAFIMDGNRRYAKKCQVERQEGHTQGFNKLAETLRWCLNLGILEVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
I N++R SE+ L+ L +
Sbjct: 80 IENFKRSKSEVDGLLDLARQKFSCLMEE-------------------------------- 107
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
L + F Y+SR EI+ A++ + +E G + DV SL+ K L ++ P PD+
Sbjct: 108 ----QCFLNVCFAYTSRHEIANAVREMAWGVEQGLLEPSDVSESLLDKCLYSNHSPHPDI 163
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
+IRT GE RLSDFLLWQ ++S VF P WP+++ A+ Q+ R G L K
Sbjct: 164 LIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLCEAILQFQ---RNHGALQK 217
>gi|71068242|gb|AAZ23097.1| hypothetical protein [Streptomyces fradiae]
Length = 221
Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 72/235 (30%), Positives = 108/235 (45%), Gaps = 17/235 (7%)
Query: 5 MMSSSPP--DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
M + P H+ +I DGN RWA RGL AGH +G + + GI +LT+F
Sbjct: 1 MNPETTPQCHHVAVIPDGNRRWAKRRGLDSGAGHAEGARRAVSLAEWCRDWGISHLTVFL 60
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
S +N+ RP E++ L++ ++ + + + IG+ L ++ A
Sbjct: 61 MSRSNFNRPDEELAPLLEAVEGVFSRLSAVPATS---LSTIGDLGLLPASSRQRIEGAVG 117
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
+ L++ +A Y S DEI A+ ++ D I L + PD
Sbjct: 118 LSPDRPDLHVNLAVGYDSEDEIRHAVHSVITDGAD------------IKDALALAGQPDV 165
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
DL+IRT GE+RLS FL Q A +E F WPDF R F A+ + R RR+G
Sbjct: 166 DLVIRTSGERRLSGFLPLQTAMAELHFTDTLWPDFGRSDFELAVKDFFTRQRRYG 220
>gi|47216331|emb|CAG03368.1| unnamed protein product [Tetraodon nigroviridis]
Length = 283
Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 66/226 (29%), Positives = 108/226 (47%), Gaps = 36/226 (15%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P H+ IMDGN R+A + + GH +G E + + I+ +T++AFS
Sbjct: 20 LKAGPMPKHVAFIMDGNRRFARKKNMECLKGHMQGFNKLAETLRWCKHLNIQEVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
I N++R E+ L++L + K
Sbjct: 80 IENFKRTKEEVDGLMELARQKFVKLLEE-------------------------------- 107
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
L + F+Y+SR EI+ A++ + +E G + + DV SL+ + L +++ P+PDL
Sbjct: 108 ----RCFLNVCFSYTSRHEITNAVREMAWGVEEGLLKASDVSESLLNECLYSNNSPNPDL 163
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
+IRT GE RLSDFLLWQ ++S VF WP++S A+ +Y
Sbjct: 164 LIRTSGEVRLSDFLLWQSSHSCIVFQSVLWPEYSFWNLCEAILRYQ 209
>gi|302792989|ref|XP_002978260.1| hypothetical protein SELMODRAFT_233104 [Selaginella moellendorffii]
gi|300154281|gb|EFJ20917.1| hypothetical protein SELMODRAFT_233104 [Selaginella moellendorffii]
Length = 235
Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 75/231 (32%), Positives = 126/231 (54%), Gaps = 9/231 (3%)
Query: 16 IIMDGNGRWAAARGLPRCAGHRKGIEVF----NEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+IMDGN RWA ARG+ + R E EIV +++ GIK LT+FAFS N+ RP
Sbjct: 1 MIMDGNSRWAKARGIAKEFQLRAAAEACYSNAREIVRLSSDWGIKALTLFAFSTENFLRP 60
Query: 72 VSEISELVKLIKSFLKKGFYS-LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
E+ + ++ + L + + + I+ IG+ L + + EA+ T NTG+
Sbjct: 61 REEVDQWMQQFERVLSLDDPATMLLDGIQFHCIGDTARLPRTLQVKISEAQCITSGNTGM 120
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD----PDLII 186
+A Y ++ +A + + ++++ G++ D+D +++ L + + P+L++
Sbjct: 121 KFVMAIGYGGHSDLVQACQALAREVQQGNLAVQDIDQINLSRRLMLGERCEDVGAPELLV 180
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RT GE+RLS+F+LW +AYSE VF + WPDF E + +AL + R R G
Sbjct: 181 RTSGEQRLSNFMLWHLAYSELVFEKQLWPDFGEEEYKNALVAFQGRKRTLG 231
>gi|323446987|gb|EGB02967.1| hypothetical protein AURANDRAFT_16553 [Aureococcus anophagefferens]
Length = 230
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 76/232 (32%), Positives = 124/232 (53%), Gaps = 6/232 (2%)
Query: 10 PPDHIGIIMDGNGRWAAARGLP--RCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
P H+ IMDGN R+ A R P R GH G E+V G+ +T FAFS N
Sbjct: 1 LPAHVAFIMDGNRRFGAKRFGPARRLEGHAAGGRKLGEVVDWCLRAGVAEVTAFAFSTEN 60
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIG-NRLSLDDDILCVLKEAEDQTRL 126
W R +E++ L++ + ++ ++ V+ + L D+ L+ E +T
Sbjct: 61 WHRDSAEVALLMRTFVDQCAEILKHAREKRVRCDVLCTDATRLPADVRAALETLETETAF 120
Query: 127 NTG-LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
L L +A +Y +R EI+ A + + + + +G + + DVD + + L PDL+
Sbjct: 121 ADAALTLHLAVSYGARGEIASAARKLAERVAAGEIDAGDVDEASLGAALALR--SPPDLL 178
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+RT GE+RLS+FLLWQ+AY+E VF+ ++WP+ + + F L++Y R RR+G
Sbjct: 179 VRTSGERRLSNFLLWQMAYTELVFLDKHWPELAEDDFDAVLDEYARRQRRYG 230
>gi|223998744|ref|XP_002289045.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976153|gb|EED94481.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 250
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 87/250 (34%), Positives = 126/250 (50%), Gaps = 25/250 (10%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAE------------------V 53
HI I DGN RWA LP+ GH G + + + +
Sbjct: 1 RHIAFICDGNSRWARQNMLPKSMGHAAGADRVMNTITSLKQRQTLSQLTTTDGEDTRKQH 60
Query: 54 GIKNLTIFAFSINNWRRPVSEISELVKLIKSF--LKKGFYSLKKNNIKVRVIGNR--LSL 109
I+ T+FAFS NW RP SEI+ L KL++ + ++++ I++ ++G+ +
Sbjct: 61 TIEYCTLFAFSTENWSRPSSEITTLFKLMERIAIQYRQHDAIREGKIQIDLLGDLNDERI 120
Query: 110 DDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV-DSS 168
+ L+ E+ L + +A NY R +I +A +++ Q I SG + + + S
Sbjct: 121 PEGARRELQREEN--AHADILTICLAINYGGRADILQAARSLAQSIASGELSLDAIHNES 178
Query: 169 LIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQ 228
I+K L T +PDPDL+IRTGGEKRLS+FLLW AY+E F WPDF E AL
Sbjct: 179 EISKRLSTVHLPDPDLVIRTGGEKRLSNFLLWNAAYAELYFTDILWPDFDNEALEEALVW 238
Query: 229 YNLRDRRFGG 238
Y R RRFGG
Sbjct: 239 YGDRSRRFGG 248
>gi|150864446|ref|XP_001383263.2| hypothetical protein PICST_41956 [Scheffersomyces stipitis CBS
6054]
gi|149385702|gb|ABN65234.2| cis-prenyltransferase [Scheffersomyces stipitis CBS 6054]
Length = 343
Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats.
Identities = 72/230 (31%), Positives = 115/230 (50%), Gaps = 7/230 (3%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P H+GIIMDGN R+A + GH G + ++ E G+K +++AFS
Sbjct: 26 IQTGPTPKHVGIIMDGNRRYAKNHKIEIKEGHNLGFDSMANVLEILYESGVKCASVYAFS 85
Query: 65 INNWRRPVSEISELVKLIKSFLK---KGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N+RR E+ L+ L KS + + + I++++IGN+ + D+ +L++ E
Sbjct: 86 IENFRRSSLEVKWLMDLAKSKFQQINQHSDLCAEYGIRIKIIGNKKLIPPDVAKILQQTE 145
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ T+ N L I F Y+SRDE++ +I D + +D + T D P
Sbjct: 146 EITKDNKRALLNICFPYTSRDEMTNSI-KCAVDQSTIDHD-FVIDEDTLESLFYTHDAPP 203
Query: 182 PDLIIRTGGEKRLSDFLLWQVAY--SEFVFIPEYWPDFSRELFFHALNQY 229
DL++RT G RLSDFLLWQ VF+ + WP F+ L +
Sbjct: 204 LDLLVRTSGTFRLSDFLLWQCVSPDCSIVFVDKLWPAFTPFDMAKILFNW 253
>gi|146418124|ref|XP_001485028.1| hypothetical protein PGUG_02757 [Meyerozyma guilliermondii ATCC
6260]
gi|146390501|gb|EDK38659.1| hypothetical protein PGUG_02757 [Meyerozyma guilliermondii ATCC
6260]
Length = 318
Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats.
Identities = 76/236 (32%), Positives = 130/236 (55%), Gaps = 7/236 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + + P HI IMDGN R++ + GH KG EV E++ A ++ I ++T+
Sbjct: 49 LINMLRTGPNPKHIAFIMDGNRRFSKRNHMKLADGHSKGAEVLFEVLTTAYQLDISHVTV 108
Query: 61 FAFSINNWRRPVSEISELVKLIKSFL----KKGFYSLKKNNIKVRVIGNRLSLDDDILCV 116
+AFSI N+ RP E+ L L++ L + N++K+++IGNR + DDIL
Sbjct: 109 YAFSIENFNRPQDEVDTLFGLLRDKLAILADNETSFAQVNHVKIKIIGNRSYIPDDILSQ 168
Query: 117 LKEAEDQT-RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD 175
L+E E +T + ++ L + F Y+SRD+I+ A++ + + S + D++ ++ +
Sbjct: 169 LEEIERKTNKPDSHKVLNVCFPYTSRDDITEAMRKVVSSLVSSDLQRQDLNEDVLQHQMY 228
Query: 176 T-SDVPDPDLIIRTGGEKRLSDFLLWQV-AYSEFVFIPEYWPDFSRELFFHALNQY 229
+ P D++IRT G RLSDF+LWQ A + F+ WP+F FF L ++
Sbjct: 229 MDPNTPQLDILIRTSGHTRLSDFMLWQCTANCDIEFVETLWPEFGFFQFFQILVKW 284
>gi|6319474|ref|NP_009556.1| Rer2p [Saccharomyces cerevisiae S288c]
gi|465535|sp|P35196|RER2_YEAST RecName: Full=Dehydrodolichyl diphosphate synthase; Short=DEDOL-PP
synthase
gi|403317|emb|CAA81271.1| unknown [Saccharomyces cerevisiae]
gi|536188|emb|CAA84938.1| unnamed protein product [Saccharomyces cerevisiae]
gi|4126457|dbj|BAA36577.1| cis-prenyltransferase [Saccharomyces cerevisiae]
gi|285810338|tpg|DAA07123.1| TPA: Rer2p [Saccharomyces cerevisiae S288c]
gi|1582565|prf||2118405F ORF YBR0107
Length = 286
Score = 204 bits (520), Expect = 7e-51, Method: Composition-based stats.
Identities = 71/229 (31%), Positives = 116/229 (50%), Gaps = 9/229 (3%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S+ P H+G IMDGN R+A + + GH G + I+ E G+ T+FAFSI
Sbjct: 28 SNCVPRHVGFIMDGNRRFARKKEMDVKEGHEAGFVSMSRILELCYEAGVDTATVFAFSIE 87
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
N++R E+ L+ L + +++ K +++++IG+ LD +L ++ A +
Sbjct: 88 NFKRSSREVESLMTLARERIRQITERGELACKYGVRIKIIGDLSLLDKSLLEDVRVAVET 147
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N L I F Y+ R+EI A+K + G+ +D S + +L T+ VP D
Sbjct: 148 TKNNKRATLNICFPYTGREEILHAMKETIVQHKKGAA----IDESTLESHLYTAGVPPLD 203
Query: 184 LIIRTGGEKRLSDFLLWQVA--YSEFVFIPEYWPDFSRELFFHALNQYN 230
L+IRT G RLSDFL+WQ + + WP+F L +++
Sbjct: 204 LLIRTSGVSRLSDFLIWQASSKGVRIELLDCLWPEFGPIRMAWILLKFS 252
>gi|26554404|ref|NP_758338.1| undecaprenyl diphosphate synthase [Mycoplasma penetrans HF-2]
gi|26454414|dbj|BAC44742.1| undecaprenyl diphosphate synthase [Mycoplasma penetrans HF-2]
Length = 225
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 87/229 (37%), Positives = 122/229 (53%), Gaps = 11/229 (4%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
HI IMDGNGRWA R R GH +GI+ EIV E I+ ++ FAFS+ NW+R
Sbjct: 5 KHIAFIMDGNGRWAKVRNKSRTYGHSQGIKNLLEIVQCCIEKEIEQVSFFAFSMENWKRG 64
Query: 72 VSEISE-LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN-TG 129
E++ L L+K+ K ++ I + IG +L ++ LK+ E Q+
Sbjct: 65 KEEVNFLLNLLLKNLNGKLLNKMEDLGIVGKWIGFENNLPRTLVTTLKKIESQSSKFEKK 124
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ + + FNYS EI A+K+ D E YL T + DL+IRT
Sbjct: 125 IQVNLFFNYSGTLEILEALKDAQLDKEKMKPVEE---------YLITHSLLPIDLLIRTS 175
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GE+RLS+F L+ +AYSE +F P+YWPD++RE + QY RDRRFG
Sbjct: 176 GEQRLSNFCLFNLAYSEIIFEPKYWPDYNRETLLDNIEQYYQRDRRFGK 224
>gi|151946396|gb|EDN64618.1| cis-prenyltransferase [Saccharomyces cerevisiae YJM789]
Length = 286
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 71/229 (31%), Positives = 115/229 (50%), Gaps = 9/229 (3%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S+ P H+G IMDGN R+A + + GH G + I+ E G+ T+FAFSI
Sbjct: 28 SNCVPRHVGFIMDGNRRFARKKEMDVKEGHEAGFVSMSRILELCYEAGVDTATVFAFSIE 87
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
N++R E+ L+ L + +++ K +++++IG+ LD +L ++ A +
Sbjct: 88 NFKRSSREVESLMTLARERIRQITERGELACKYGVRIKIIGDLSLLDKSLLEDVRVAVET 147
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N L I F Y+ R+EI AIK + G+ + S + +L T+ VP D
Sbjct: 148 TKNNKRATLNICFPYTGREEILHAIKETIVQHKKGAA----IGESTLESHLYTAGVPPLD 203
Query: 184 LIIRTGGEKRLSDFLLWQVA--YSEFVFIPEYWPDFSRELFFHALNQYN 230
L+IRT G RLSDFL+WQ + + WP+F L +++
Sbjct: 204 LLIRTSGVSRLSDFLIWQASSKGVRIELLDCLWPEFGPIRMAWILLKFS 252
>gi|159476400|ref|XP_001696299.1| predicted protein [Chlamydomonas reinhardtii]
gi|158282524|gb|EDP08276.1| predicted protein [Chlamydomonas reinhardtii]
Length = 229
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 66/230 (28%), Positives = 115/230 (50%), Gaps = 7/230 (3%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P+H+ +MDGN R+A + + + GH G E++ E+G+++++++AFSI+N+RR
Sbjct: 1 PEHVAFVMDGNRRYAERQHVDKATGHTHGYGKMVEVIHWCMELGVRHISVYAFSIDNFRR 60
Query: 71 PVSEISELVKLIKSF---LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR-- 125
E++ L++L + L + ++ I + ++G+ + T
Sbjct: 61 SPEEVTALMRLAEDKYFELARDNGLAEREGICMHIVGDLTLPPPSVQGAAARLMRNTAAL 120
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT-SDVPDPDL 184
L + F+Y++ +E A+ + + G + DV + L T D P DL
Sbjct: 121 RRHRATLNVCFSYTASEESVAAVSELQAAVRQGLLQPGDVTPVALHGALRTRHDCPPVDL 180
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
++RT GE RLSDFLLWQVA++ ++P WPD S F + Y R R
Sbjct: 181 LVRTSGETRLSDFLLWQVAHAHLCYLPTLWPDLSVLDFARCVLSYQ-RQR 229
>gi|207347805|gb|EDZ73867.1| YBR002Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 284
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 70/229 (30%), Positives = 115/229 (50%), Gaps = 9/229 (3%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S+ P H+G IMDGN R+A + + GH G + I+ E G+ T+FAFSI
Sbjct: 28 SNCVPRHVGFIMDGNRRFARKKEMDVKEGHEAGFVSMSRILELCYEAGVDTATVFAFSIE 87
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
N++R E+ L+ L + +++ K +++++IG+ LD +L ++ A +
Sbjct: 88 NFKRSSREVESLMTLARERIRQITERGELACKYGVRIKIIGDLSLLDKSLLEDVRVAVET 147
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N L I F Y+ R+EI A+K + G+ + S + +L T+ VP D
Sbjct: 148 TKNNKRATLNICFPYTGREEILHAMKETIVQHKKGAA----IGESTLESHLYTAGVPPLD 203
Query: 184 LIIRTGGEKRLSDFLLWQVA--YSEFVFIPEYWPDFSRELFFHALNQYN 230
L+IRT G RLSDFL+WQ + + WP+F L +++
Sbjct: 204 LLIRTSGVSRLSDFLIWQASSKGVRIELLDCLWPEFGPIRMAWILLKFS 252
>gi|190408826|gb|EDV12091.1| cis-prenyltransferase [Saccharomyces cerevisiae RM11-1a]
gi|256273182|gb|EEU08131.1| Rer2p [Saccharomyces cerevisiae JAY291]
gi|259144848|emb|CAY77787.1| Rer2p [Saccharomyces cerevisiae EC1118]
gi|323310185|gb|EGA63377.1| Rer2p [Saccharomyces cerevisiae FostersO]
gi|323338818|gb|EGA80033.1| Rer2p [Saccharomyces cerevisiae Vin13]
gi|323349820|gb|EGA84034.1| Rer2p [Saccharomyces cerevisiae Lalvin QA23]
Length = 286
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 70/229 (30%), Positives = 115/229 (50%), Gaps = 9/229 (3%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S+ P H+G IMDGN R+A + + GH G + I+ E G+ T+FAFSI
Sbjct: 28 SNCVPRHVGFIMDGNRRFARKKEMDVKEGHEAGFVSMSRILELCYEAGVDTATVFAFSIE 87
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
N++R E+ L+ L + +++ K +++++IG+ LD +L ++ A +
Sbjct: 88 NFKRSSREVESLMTLARERIRQITERGELACKYGVRIKIIGDLSLLDKSLLEDVRVAVET 147
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N L I F Y+ R+EI A+K + G+ + S + +L T+ VP D
Sbjct: 148 TKNNKRATLNICFPYTGREEILHAMKETIVQHKKGAA----IGESTLESHLYTAGVPPLD 203
Query: 184 LIIRTGGEKRLSDFLLWQVA--YSEFVFIPEYWPDFSRELFFHALNQYN 230
L+IRT G RLSDFL+WQ + + WP+F L +++
Sbjct: 204 LLIRTSGVSRLSDFLIWQASSKGVRIELLDCLWPEFGPIRMAWILLKFS 252
>gi|9757753|dbj|BAB08234.1| undecaprenyl pyrophosphate synthetase-like protein [Arabidopsis
thaliana]
Length = 251
Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats.
Identities = 63/231 (27%), Positives = 110/231 (47%), Gaps = 4/231 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLP-RCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P +I IMDGN R+A R L AGHR G I+ E+G+ +T++AF
Sbjct: 9 LRVGPIPTNISFIMDGNRRFAKKRNLEGLDAGHRAGFISVKYILQYCKEIGVPYVTLYAF 68
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFY---SLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
++N++R E+ ++ L+ ++ S N +++ G+ SL++ K+
Sbjct: 69 GMDNFKRGPEEVKCVMDLMLEKVELTIDQAVSGNMNGVRIIFAGDLNSLNERFRAATKKL 128
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ T N L + + YS+ EI A+++ S ++ S I + + TS VP
Sbjct: 129 MELTEENRDLIVVVCVAYSTSVEIVHAVRDSCVRKSKTGDGSSALELSDIEECMYTSVVP 188
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
PDL++RTGG RLS+F+ WQ + + WP+ A+ ++
Sbjct: 189 VPDLVVRTGGGDRLSNFMTWQTSRALLHRTEALWPELGLWHLVWAILKFQR 239
>gi|15239358|ref|NP_200859.1| undecaprenyl pyrophosphate synthetase family protein / UPP
synthetase family protein [Arabidopsis thaliana]
gi|93117611|sp|Q8LAR7|DDPS8_ARATH RecName: Full=Dehydrodolichyl diphosphate synthase 8;
Short=Dedol-PP synthase 8
gi|332009955|gb|AED97338.1| dehydrodolichyl diphosphate synthase 8 [Arabidopsis thaliana]
Length = 272
Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats.
Identities = 63/231 (27%), Positives = 110/231 (47%), Gaps = 4/231 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLP-RCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P +I IMDGN R+A R L AGHR G I+ E+G+ +T++AF
Sbjct: 30 LRVGPIPTNISFIMDGNRRFAKKRNLEGLDAGHRAGFISVKYILQYCKEIGVPYVTLYAF 89
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFY---SLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
++N++R E+ ++ L+ ++ S N +++ G+ SL++ K+
Sbjct: 90 GMDNFKRGPEEVKCVMDLMLEKVELTIDQAVSGNMNGVRIIFAGDLNSLNERFRAATKKL 149
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ T N L + + YS+ EI A+++ S ++ S I + + TS VP
Sbjct: 150 MELTEENRDLIVVVCVAYSTSVEIVHAVRDSCVRKSKTGDGSSALELSDIEECMYTSVVP 209
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
PDL++RTGG RLS+F+ WQ + + WP+ A+ ++
Sbjct: 210 VPDLVVRTGGGDRLSNFMTWQTSRALLHRTEALWPELGLWHLVWAILKFQR 260
>gi|297793607|ref|XP_002864688.1| undecaprenyl pyrophosphate synthetase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297310523|gb|EFH40947.1| undecaprenyl pyrophosphate synthetase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 272
Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats.
Identities = 64/231 (27%), Positives = 109/231 (47%), Gaps = 4/231 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLP-RCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P +I IMDGN R+A R L AGHR G I+ E+G+ +T++AF
Sbjct: 30 LRVGPIPTNISFIMDGNRRFAKKRNLEGLDAGHRAGFISVKYILQYCKEIGVPYVTLYAF 89
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFY---SLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
++N++R E+ ++ L+ ++ S N +++ G+ SL++ ++
Sbjct: 90 GMDNFKRGPEEVKCVMDLMLEKVELTIDQAVSGNMNGVRIIFAGDLNSLNERFRAATQKL 149
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
T N L + + YS+ EI A+++ S ++ S I + + TS VP
Sbjct: 150 MKLTEENRDLIVVVCVAYSTSVEIVHAVRDSCVRKSKIGDGSVALELSDIEECMYTSVVP 209
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
PDL+IRTGG RLS+F+ WQ + S WP+ A+ ++
Sbjct: 210 VPDLVIRTGGGDRLSNFMTWQTSKSLLHRTEALWPELGLWHLVWAILKFQR 260
>gi|21593244|gb|AAM65193.1| undecaprenyl diphosphate synthase [Arabidopsis thaliana]
Length = 272
Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats.
Identities = 63/231 (27%), Positives = 110/231 (47%), Gaps = 4/231 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLP-RCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P +I IMDGN R+A R L AGHR G I+ E+G+ +T++AF
Sbjct: 30 LRVGPIPTNISFIMDGNRRFAKKRNLEGLDAGHRAGFISVKYILQYCKEIGVPYVTLYAF 89
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFY---SLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
++N++R E+ ++ L+ ++ S N +++ G+ SL++ K+
Sbjct: 90 GMDNFKRGPEEVKCVMDLMLEKVELTIDQAVSGNMNGVRIIFAGDLNSLNERFRAATKKL 149
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ T N L + + YS+ EI A+++ S ++ S I + + TS VP
Sbjct: 150 MELTEENRDLIVVVCVAYSTSVEIVHAVRDSCVRKSKTGDGSSALELSDIEECMYTSVVP 209
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
PDL++RTGG RLS+F+ WQ + + WP+ A+ ++
Sbjct: 210 VPDLMVRTGGGDRLSNFMTWQTSRALLHRTEALWPELGLWHLVWAILKFQR 260
>gi|254550078|ref|ZP_05140525.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis '98-R604 INH-RIF-EM']
Length = 242
Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats.
Identities = 69/217 (31%), Positives = 109/217 (50%), Gaps = 7/217 (3%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
S P HI ++ DGN RWA + G G+R G E++ E GI+ T++ S
Sbjct: 28 KSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWCHEAGIELATVYLLST 87
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
N +R E++ L+++I +++ N+ VR +G+ + ++ L+ A + T
Sbjct: 88 ENLQRDPDELAALIEIITDVVEE--ICAPANHWSVRTVGDLGLIGEEPARRLRGAVESTP 145
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSDVPD 181
++ +A Y R EI A++ + + + + V I++ L TS PD
Sbjct: 146 EVASFHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVDAVTVEGISENLYTSGQPD 205
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS 218
PDL+IRT GE+RLS FLLWQ AYSE F +WP F
Sbjct: 206 PDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFR 242
>gi|124484946|ref|YP_001029562.1| undecaprenyl pyrophosphate synthetase [Methanocorpusculum labreanum
Z]
gi|124362487|gb|ABN06295.1| Undecaprenyl pyrophosphate synthetase [Methanocorpusculum labreanum
Z]
Length = 252
Score = 202 bits (513), Expect = 5e-50, Method: Composition-based stats.
Identities = 67/228 (29%), Positives = 112/228 (49%), Gaps = 5/228 (2%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ II DGN R+A A+G GHR G E+ ++ E+G+ + T +AFS N++
Sbjct: 22 VPTHVAIIQDGNRRYAKAKGKDTAFGHRAGAEITMKVFDWMEELGVIHTTFYAFSTENFK 81
Query: 70 RPVSEISELVKLIKSFLKKGFY--SLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
R E++EL++L + + + + VIG+R ++D +L + + E+ T+ +
Sbjct: 82 RSPEEVNELLELFIEKFSEMIKDQRIYDKKVNITVIGDRSLINDRLLQKIHDVEEATKDH 141
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS-DVPDPDLII 186
L A Y R+EI K+I + +G + + + + + ++P DLII
Sbjct: 142 HHYYLHFAIAYGGRNEILETTKSIVAKVRAGELSPDLITPDCVTERMYPEVEMPPVDLII 201
Query: 187 RTGGEKRLSDFLLWQVAYSE--FVFIPEYWPDFSRELFFHALNQYNLR 232
RT +KR S+FL W +E F WP+F AL Y+ R
Sbjct: 202 RTANDKRTSNFLPWLANGNEAAVCFCVPPWPEFRYVDMVRALRTYDQR 249
>gi|114052074|ref|NP_001040452.1| dehydrodolichyl diphosphate synthase [Bombyx mori]
gi|95102950|gb|ABF51416.1| dehydrodolichyl diphosphate synthase [Bombyx mori]
Length = 234
Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats.
Identities = 58/230 (25%), Positives = 99/230 (43%), Gaps = 50/230 (21%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + + P HI IMDGN R+A + + GH KG + +E + ++GI +T++
Sbjct: 18 IKVIKTGRVPQHIAFIMDGNRRYAKKNSVDKSTGHHKGFDKLSETLKWCLDLGIPEVTVY 77
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFSI N++R E+ L++L + + +
Sbjct: 78 AFSIENFKRSKEEVDALMELAREKFQNLLDEM---------------------------- 109
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
DEISRA I ++ + ++D LI++ LD +
Sbjct: 110 -------------------SDEISRAASRIIDGVKENKISPENIDEELISQSLDLGE--- 147
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
P+L++RT GE RLSDF+LWQ++ + F WP+F+ A+ +
Sbjct: 148 PELLVRTSGEVRLSDFMLWQISNTVLYFTDVLWPEFTIWNLLAAIIHFQR 197
>gi|15239357|ref|NP_200858.1| undecaprenyl pyrophosphate synthetase family protein / UPP
synthetase family protein [Arabidopsis thaliana]
gi|75246018|sp|Q8LED0|DDPS7_ARATH RecName: Full=Dehydrodolichyl diphosphate synthase 7;
Short=Dedol-PP synthase 7
gi|21553621|gb|AAM62714.1| undecaprenyl diphosphate synthase [Arabidopsis thaliana]
gi|332009954|gb|AED97337.1| dehydrodolichyl diphosphate synthase 7 [Arabidopsis thaliana]
Length = 271
Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats.
Identities = 62/235 (26%), Positives = 108/235 (45%), Gaps = 4/235 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLP-RCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ + P +I IMDGN R+A L AGHR G I+ E+G+ +T
Sbjct: 25 LFRVLCVGPIPTNISFIMDGNRRFAKKHNLIGLDAGHRAGFISVKYILQYCKEIGVPYVT 84
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFY---SLKKNNIKVRVIGNRLSLDDDILCV 116
+ AF ++N++R E+ ++ L+ ++ S N +++ G+ SL++
Sbjct: 85 LHAFGMDNFKRGPEEVKCVMDLMLEKVELAIDQAVSGNMNGVRIIFAGDLDSLNEHFRAA 144
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT 176
K+ + T N L + + YS+ EI A++ + ++ S + + + T
Sbjct: 145 TKKLMELTEENRDLIVVVCVAYSTSLEIVHAVRKSCVRKCTNGDDLVLLELSDVEECMYT 204
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
S VP PDL+IRTGG RLS+F+ WQ + S WP+ A+ ++
Sbjct: 205 SIVPVPDLVIRTGGGDRLSNFMTWQTSRSLLHRTEALWPELGLWHLVWAILKFQR 259
>gi|159041359|ref|YP_001540611.1| undecaprenyl diphosphate synthase [Caldivirga maquilingensis
IC-167]
gi|157920194|gb|ABW01621.1| undecaprenyl diphosphate synthase [Caldivirga maquilingensis
IC-167]
Length = 235
Score = 201 bits (512), Expect = 7e-50, Method: Composition-based stats.
Identities = 74/235 (31%), Positives = 115/235 (48%), Gaps = 11/235 (4%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P+HIGII DGN RWA A G+ + G + E++ A + ++ +T++ S N+
Sbjct: 7 RLPNHIGIIPDGNRRWAMAHGMDIYTAYLIGSDKVEEVLEWALDNNVQAVTVYILSYENF 66
Query: 69 -RRPVSEISELVKLIKSFLK--KGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
R E L +L+ LK + + N +KV +IG +L ++ + + T
Sbjct: 67 MNRSEMEKRILYELLIRKLKKAREDPRIHGNKVKVTLIGRWRNLPPYVVDEAIKTMNATE 126
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP--D 183
+ L +A Y I + I ++ + K L TS +P+P D
Sbjct: 127 MYNSHFLNLAVVYGGYQSIVDLVNTAITKIGRL------INDDELIKLLPTSFLPNPFID 180
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L+IRTGGE+RLS+F + Y+E F+ +YWPDFSRE F AL Y +R+FG
Sbjct: 181 LVIRTGGERRLSNFFPLESIYAELYFLDKYWPDFSREDFQEALRYYASVERKFGK 235
>gi|9757752|dbj|BAB08233.1| undecaprenyl pyrophosphate synthetase-like protein [Arabidopsis
thaliana]
Length = 251
Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats.
Identities = 62/235 (26%), Positives = 108/235 (45%), Gaps = 4/235 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLP-RCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ + P +I IMDGN R+A L AGHR G I+ E+G+ +T
Sbjct: 5 LFRVLCVGPIPTNISFIMDGNRRFAKKHNLIGLDAGHRAGFISVKYILQYCKEIGVPYVT 64
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFY---SLKKNNIKVRVIGNRLSLDDDILCV 116
+ AF ++N++R E+ ++ L+ ++ S N +++ G+ SL++
Sbjct: 65 LHAFGMDNFKRGPEEVKCVMDLMLEKVELAIDQAVSGNMNGVRIIFAGDLDSLNEHFRAA 124
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT 176
K+ + T N L + + YS+ EI A++ + ++ S + + + T
Sbjct: 125 TKKLMELTEENRDLIVVVCVAYSTSLEIVHAVRKSCVRKCTNGDDLVLLELSDVEECMYT 184
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
S VP PDL+IRTGG RLS+F+ WQ + S WP+ A+ ++
Sbjct: 185 SIVPVPDLVIRTGGGDRLSNFMTWQTSRSLLHRTEALWPELGLWHLVWAILKFQR 239
>gi|291001823|ref|XP_002683478.1| predicted protein [Naegleria gruberi]
gi|284097107|gb|EFC50734.1| predicted protein [Naegleria gruberi]
Length = 241
Score = 201 bits (511), Expect = 9e-50, Method: Composition-based stats.
Identities = 73/239 (30%), Positives = 109/239 (45%), Gaps = 17/239 (7%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI IMDGN R+A + +P GHR G + + + +G+K +T++AFSI+N++
Sbjct: 3 LPQHIAFIMDGNRRYATKKNIPIKEGHRSGYKKLKQCLNWCEMLGVKTVTVYAFSIDNFK 62
Query: 70 RPVSEISELVKLIKSFLKKGFYS----LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT- 124
R E+ ++ L+ K + K + +RV+G+ + + A D +
Sbjct: 63 RDKQEVDNIMDLMDRRFKDMVTKKKSFIIKYKVILRVLGDFNRFPQYVQDSAQRAMDYSY 122
Query: 125 -----RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLI-----AKYL 174
N L L + Y+S EI AI N D S S++ I K L
Sbjct: 123 KINSKYGNDALILNLCCPYTSTYEIENAITNYISDKISNKDLSNEEKKKSIVIEEETKLL 182
Query: 175 DTSDV--PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
D + +PD+I+RT GE RLSDFL WQ S YWP+FS + QY
Sbjct: 183 DKYFLTTSEPDIIVRTSGEMRLSDFLTWQCEKSMIYISSLYWPEFSFWQLVSVILQYQQ 241
>gi|255089078|ref|XP_002506461.1| predicted protein [Micromonas sp. RCC299]
gi|226521733|gb|ACO67719.1| predicted protein [Micromonas sp. RCC299]
Length = 264
Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 66/229 (28%), Positives = 116/229 (50%), Gaps = 5/229 (2%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
P H+ I+MDGN R+A RGL + +GH G E E++ + +G++ L+++AFS +N
Sbjct: 1 GPIPKHVAIVMDGNRRFAETRGLRKESGHEFGAEKLLEVLEWSLALGVECLSVYAFSTDN 60
Query: 68 WRRPVSEISELVKLIKSFLKKGFYS--LKKNNIKVRVIGNRLSLDDDI-LCVLKEAEDQT 124
++R +E+ L +L + L + S + N++V+V+G L + +
Sbjct: 61 FKRSETEVDVLFQLAERRLDEMATSRVIHDRNVRVQVLGELHMLPPGVRRAAARVMAATA 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCS-HDVDSSLIAKYLDTSDVPDPD 183
+ G L + F Y+ R+++ A+ + + + G++ DV + P D
Sbjct: 121 AHSDGPVLNVCFAYTGREDVCLAVGAMARGVGEGTLDPVDDVTERPSDETGRKPGAPPVD 180
Query: 184 LIIRTGGEKRLSDFLLWQVA-YSEFVFIPEYWPDFSRELFFHALNQYNL 231
L+IRT GE RLSDF+LW ++ ++ F WPDFS +A+ Y
Sbjct: 181 LLIRTSGETRLSDFMLWGISGHAVLCFQEVLWPDFSFTDMCYAVWTYQR 229
>gi|291446615|ref|ZP_06586005.1| uppS1 [Streptomyces roseosporus NRRL 15998]
gi|291349562|gb|EFE76466.1| uppS1 [Streptomyces roseosporus NRRL 15998]
Length = 255
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 67/231 (29%), Positives = 117/231 (50%), Gaps = 8/231 (3%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S+ P H+ +I+DGN RWA G GH G E++ ++G++ +T++ S +N
Sbjct: 17 SAVPRHMALILDGNRRWATVHGRTASEGHEAGFSRVPEVLRWCHDLGVETVTLWLLSTDN 76
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
RR +E+ L+++I + S + ++R G R + + +L L E +T N
Sbjct: 77 LRRDPAEVDALMRIITDLVNGLAAS---DRWRLRHRGVRAMVPEPLLTALDEVAARTTDN 133
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSDVPDPD 183
TG+ + +A Y R+E++ A + + + + + V + + + + +D P P+
Sbjct: 134 TGMRVNLAICYGGREEVTEACRELLEGYAHEGLSPAEAARRVTAEAVTEAIA-ADDPAPE 192
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
L++RT GE+R S FLLW ++E F YWPDF + AL Y R R
Sbjct: 193 LVVRTSGEQRSSGFLLWTARHAEHYFTTTYWPDFGYDDLKAALTHYERRSR 243
>gi|255713306|ref|XP_002552935.1| KLTH0D04906p [Lachancea thermotolerans]
gi|238934315|emb|CAR22497.1| KLTH0D04906p [Lachancea thermotolerans]
Length = 362
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 65/237 (27%), Positives = 117/237 (49%), Gaps = 7/237 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P+H+ IMDGN R+A + LP +GH G ++ +G+K ++
Sbjct: 73 LTNILKMGPLPEHVSFIMDGNRRYAKSLSLPVKSGHEAGAITLLNLLTVCRALGVKTVSA 132
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNN-----IKVRVIGNRLSLDDDILC 115
+AFSI N+ RP E+ L L+ L + + N +++ V+G R + ++
Sbjct: 133 YAFSIENFNRPQEEVDTLTSLLAEKLDEVARRAQDCNSELFGLRLCVVGERSRISKELND 192
Query: 116 VLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD 175
+ E T + L+I F Y+SR++I AI + + + + +D S++ ++
Sbjct: 193 RISSVERMTSEGDSMMLYICFPYTSRNDIYHAIYDCAETAKYHGFPAAQIDESVLTNHMM 252
Query: 176 TSD-VPDPDLIIRTGGEKRLSDFLLWQVAYSEFV-FIPEYWPDFSRELFFHALNQYN 230
+ + DL++RT G RLSD++LWQV + V F WPD+ FF L +++
Sbjct: 253 LRENSNNCDLLVRTSGHTRLSDYMLWQVHQNGHVEFSSTLWPDYGFLEFFRVLLKWS 309
>gi|16751459|dbj|BAB71776.1| cis-prenyltransferase [Hevea brasiliensis]
Length = 290
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 68/265 (25%), Positives = 113/265 (42%), Gaps = 27/265 (10%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + P HI I+DGN R+A LP GH+ G ++ E+G+K TI
Sbjct: 23 LYSILTQGPIPTHIAFILDGNRRFAKKHKLPEGGGHKAGFLALLNVLTYCYELGVKYATI 82
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLK---KGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI+N+RR E+ ++ L+ ++ + +I VR +GN L + +
Sbjct: 83 YAFSIDNFRRKPHEVQYVMDLMLEKIEGMIMEESIINAYDICVRFVGNLKLLSEPVKTAA 142
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDS---------- 167
+ T N+ L IA Y+S DEI A++ + + + +++
Sbjct: 143 DKIMRATANNSKCVLLIAVCYTSTDEIVHAVEESSELNSNEVCNNQELEEANATGSGTVI 202
Query: 168 -----------SLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPD 216
L+ +T P PD++IRT GE RLS++LLWQ WP+
Sbjct: 203 QIENMESYSGIKLVDLEKNTYINPYPDVLIRTSGETRLSNYLLWQTTNCILYSPHALWPE 262
Query: 217 FSRELFFHALNQYNLRDRRFGGLSK 241
A+ + R + L K
Sbjct: 263 IGLRHVVWAVINFQ---RHYSYLEK 284
>gi|239944505|ref|ZP_04696442.1| putative undecaprenyl pyrophosphate synthetase [Streptomyces
roseosporus NRRL 15998]
gi|291447970|ref|ZP_06587360.1| undecaprenyl pyrophosphate synthetase 2 [Streptomyces roseosporus
NRRL 15998]
gi|291350917|gb|EFE77821.1| undecaprenyl pyrophosphate synthetase 2 [Streptomyces roseosporus
NRRL 15998]
Length = 261
Score = 199 bits (505), Expect = 4e-49, Method: Composition-based stats.
Identities = 72/232 (31%), Positives = 114/232 (49%), Gaps = 7/232 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ A+++ P H+GI++DGN RWA G G+R G + GI+++T
Sbjct: 20 LAATLVGLPRPQHVGIMVDGNRRWARKAGHTDVREGYRAGGAKVTTFLGWCTAAGIEHVT 79
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
+F S +N RP E+ L+++I+ ++ + ++ IG+ L VLKE
Sbjct: 80 LFMLSDDNLGRPAEELGPLIEVIEETVRDITAEGRDWEVR--AIGSLDMLPGSSARVLKE 137
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLD 175
A T GL + +A Y R EI A+K+ F++ + ++ I+++L
Sbjct: 138 ATAATTGRGGLKVDVAVGYGGRREIVDAVKSAFEEHIAAGGDPAELVARFGIDDISRHLY 197
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALN 227
+ D IIRT GE+RLS FLLWQ AY+E ++ YWP F F AL
Sbjct: 198 SPVADHTDFIIRTSGEQRLSGFLLWQSAYAEMHWVDCYWPAFRHVDFLRALR 249
>gi|20563020|dbj|BAB92023.1| cis-prenyltransferase1 [Hevea brasiliensis]
gi|22213591|gb|AAM92883.1| cis-prenyltransferase 4 [Hevea brasiliensis]
gi|22213593|gb|AAM92884.1| cis-prenyltransferase 5 [Hevea brasiliensis]
gi|22213595|gb|AAM92885.1| cis-prenyltransferase 6 [Hevea brasiliensis]
gi|22213599|gb|AAM92887.1| cis-prenyltransferase 8 [Hevea brasiliensis]
gi|22213601|gb|AAM92888.1| cis-prenyltransferase 9 [Hevea brasiliensis]
Length = 290
Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats.
Identities = 68/265 (25%), Positives = 112/265 (42%), Gaps = 27/265 (10%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + P HI I+DGN R+A LP GH+ G ++ E+G+K TI
Sbjct: 23 LYSILTQGPIPTHIAFILDGNRRFAKKHKLPEGGGHKAGFLALLNVLTYCYELGVKYATI 82
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLK---KGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI+N+RR E+ ++ L+ ++ + +I VR +GN L + +
Sbjct: 83 YAFSIDNFRRKPHEVQYVMDLMLEKIEGMIMEESIINAYDICVRFVGNLKLLSEPVKTAA 142
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDS---------- 167
+ T N+ L IA Y+S DEI A++ + + + +++
Sbjct: 143 DKIMRATANNSKCVLLIAVCYTSTDEIVHAVEESSELNSNEVCNNQELEEANATGSGTVI 202
Query: 168 -----------SLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPD 216
L+ +T P PD++IRT GE RLS++LLWQ WP+
Sbjct: 203 QIENMESYSGIKLVDLEKNTYINPYPDVLIRTSGETRLSNYLLWQTTNCILYSPHALWPE 262
Query: 217 FSRELFFHALNQYNLRDRRFGGLSK 241
A+ R + L K
Sbjct: 263 IGLRHVVWAVI---NCQRHYSYLEK 284
>gi|262277276|ref|ZP_06055069.1| undecaprenyl pyrophosphate synthetase 1 [alpha proteobacterium
HIMB114]
gi|262224379|gb|EEY74838.1| undecaprenyl pyrophosphate synthetase 1 [alpha proteobacterium
HIMB114]
Length = 226
Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats.
Identities = 87/231 (37%), Positives = 122/231 (52%), Gaps = 9/231 (3%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ IIMDGNGRW R GH+KG+E + + IKNLT++A S +N
Sbjct: 2 KLPSHVAIIMDGNGRWGLKNYKNRIKGHQKGVENIKPFIDFFLKKKIKNLTLYALSKDNL 61
Query: 69 -RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL- 126
+R EI+ ++ L+ +L++ KN I + IG +L +I +LK+ T+L
Sbjct: 62 LKRDQKEINNILDLLDKYLRQNNDFFIKNKIHLNFIGENRNLPKNIKILLKKTSKVTKLP 121
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
L L IAFNYSSR +I +IK F +++ + K L T D DL+I
Sbjct: 122 KANLVLNIAFNYSSRSDIILSIKKTF-------KNKNNLTIKNLTKNLSTYISGDLDLVI 174
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
RTGG KRLSDFLLW+ +YSE F + WPDF+ L ++ R FG
Sbjct: 175 RTGGHKRLSDFLLWESSYSEIYFCNKLWPDFNIRDLNRLLYNFSKIKRNFG 225
>gi|323306066|gb|EGA59800.1| Rer2p [Saccharomyces cerevisiae FostersB]
Length = 258
Score = 197 bits (502), Expect = 8e-49, Method: Composition-based stats.
Identities = 69/219 (31%), Positives = 110/219 (50%), Gaps = 9/219 (4%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S+ P H+G IMDGN R+A + + GH G + I+ E G+ T+FAFSI
Sbjct: 28 SNCVPRHVGFIMDGNRRFARKKEMDVKEGHEAGFVSMSRILELCYEAGVDTATVFAFSIE 87
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
N++R E+ L+ L + +++ K +++++IG+ LD +L ++ A +
Sbjct: 88 NFKRSSREVESLMTLARERIRQITERGELACKYGVRIKIIGDLSLLDKSLLEDVRVAVET 147
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
T+ N L I F Y+ R+EI A K + G+ + S + +L T+ VP D
Sbjct: 148 TKNNKRATLNICFPYTGREEILHAXKETIVQHKKGAA----IGESTLESHLYTAGVPPLD 203
Query: 184 LIIRTGGEKRLSDFLLWQVA--YSEFVFIPEYWPDFSRE 220
L+IRT G RLSDFL+WQ + + WP+F
Sbjct: 204 LLIRTSGVSRLSDFLIWQASSKGVRIELLDCLWPEFGPI 242
>gi|16751461|dbj|BAB71777.1| cis-prenyltransferase [Hevea brasiliensis]
Length = 284
Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 68/259 (26%), Positives = 113/259 (43%), Gaps = 21/259 (8%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + P HI I+DGN R+A LP GH+ G ++ E+G+K TI
Sbjct: 23 LYSILTQGPIPTHIAFILDGNRRFAKKHKLPEGGGHKAGFLALLNVLTYCYELGVKYATI 82
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLK---KGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI+N+RR E+ ++ L+ ++ + +I VR +GN L + +
Sbjct: 83 YAFSIDNFRRKPHEVQYVMDLMLEKIEGMIMEESIINAYDICVRFVGNLKLLSEPVKTAA 142
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSS--------- 168
+ T N+ L +A Y+S DEI A++ +D + +D +
Sbjct: 143 DKIMRATANNSKFVLLLAVCYTSTDEIVHAVEESSKDKLKSNEICNDGNGDCVIKIEEME 202
Query: 169 ------LIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELF 222
L+ +T P PD++IRT GE RLS++LLWQ WP+
Sbjct: 203 PYSEIKLVELERNTYINPYPDVLIRTSGETRLSNYLLWQTTNCILYSPHALWPEIGLRHV 262
Query: 223 FHALNQYNLRDRRFGGLSK 241
++ + R + L K
Sbjct: 263 VWSVINFQ---RHYSYLEK 278
>gi|322782795|gb|EFZ10595.1| hypothetical protein SINV_80008 [Solenopsis invicta]
Length = 437
Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats.
Identities = 75/244 (30%), Positives = 122/244 (50%), Gaps = 19/244 (7%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRK-----------GIEVFNEIVAAA 50
+ + + P H+ IIMDGN R+A + R GH K G I+
Sbjct: 120 LKIIRTGKVPRHVTIIMDGNRRYAKKEKILRNEGHIKEYVSLKSEFARGFNNLLRIILLC 179
Query: 51 AEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLD 110
++GI +T++ FSI+N++ E+ +++ +IK F + L + +RVIGN L
Sbjct: 180 KDLGIVEITVYIFSIDNFKCTKEEVDDIMNIIKRFF-EDINELADVGVCIRVIGNLSFLR 238
Query: 111 DDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLI 170
+D+L + A ++ N L L +A +Y+SRDE++ AIK I + D+ +LI
Sbjct: 239 EDVLKSIARAIITSKDNNKLILNLACSYTSRDELTHAIKEIAMGTMHNDILREDITENLI 298
Query: 171 AKYLDTSDVPDPDLIIRTGGEKRL--SDFLLWQVAYSEFVFIPEYWPDFSRE---LFFHA 225
+ L T +PDL+IRT GE RL S+FL+WQ ++ F P W S + F+
Sbjct: 299 SDCLYTYKSSNPDLLIRTSGEVRLIVSNFLMWQYFHA-MGFQPS-WSQSSTDYCLEFWKT 356
Query: 226 LNQY 229
+ +
Sbjct: 357 IQHF 360
>gi|50291875|ref|XP_448370.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527682|emb|CAG61331.1| unnamed protein product [Candida glabrata]
Length = 342
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 61/237 (25%), Positives = 116/237 (48%), Gaps = 7/237 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ + P H+ IMDGN R+A ++ +P GH G E +V +G+K ++
Sbjct: 55 LIFALRTGPVPAHVAFIMDGNRRFAKSKDIPLRKGHEAGGETLLTLVYICKTLGVKCISA 114
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKK-----NNIKVRVIGNRLSLDDDILC 115
+AFSI N+ RP E+ L+ L L + +R++G+R + ++
Sbjct: 115 YAFSIENFNRPREEVETLMNLFGDKLDEFAQKANDYKDPLYGSSLRIVGDRSLISPELRE 174
Query: 116 VLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD 175
++ E T + L+I F Y+SR++I + + + ++ ++ + K +
Sbjct: 175 RIENVEKLTENSEKFILYICFPYTSRNDIFQTVTKVTDKYVQSNIIDSNLSINEFTKSMH 234
Query: 176 TSDVPD-PDLIIRTGGEKRLSDFLLWQVA-YSEFVFIPEYWPDFSRELFFHALNQYN 230
+ D D++IRT G KRLSDF+LWQV ++ F WP F+ + + +++
Sbjct: 235 FKEYSDNCDILIRTSGHKRLSDFMLWQVNEHATMEFSTSLWPQFNFFQMYLIILRWS 291
>gi|331218399|ref|XP_003321877.1| undecaprenyl pyrophosphate synthetase [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|309300867|gb|EFP77458.1| undecaprenyl pyrophosphate synthetase [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 325
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 86/289 (29%), Positives = 132/289 (45%), Gaps = 53/289 (18%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P+H+G IMDGN R++ + GLP GHR G E I+ + + N+T+
Sbjct: 32 LIRTLQLGPLPNHVGFIMDGNRRFSRSVGLPVEDGHRAGFEALKRILELLLRLEVPNVTV 91
Query: 61 FAFSINNWRRPVSEISELVKLIKSFL-----KKGFYSLKKNNIKVRVIGNRLSLDDDILC 115
+AF+I N++R E+++L+ L ++ L K L + I+V VIG + L DI
Sbjct: 92 YAFAIGNFKRSAEEVNKLMDLARTKLVQICEKGFRQLLDRYGIRVVVIGRKDLLPPDIKE 151
Query: 116 VLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD 175
+ + E+ T N L +AF YSS++E++ AI QD S + +D I K L
Sbjct: 152 SVCKVEEMTINNKRGCLNVAFPYSSQEEMASAIYKTAQDSISDQTPTSLIDIDTIDKNLY 211
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQ--VAYSEF-------------------------- 207
TS P D++IRT G RLSDFLLWQ + SE+
Sbjct: 212 TSHSPPLDILIRTSGVSRLSDFLLWQTTLNSSEYEPSSTTTAADPTENLISPIEPEQHKR 271
Query: 208 ------------------VFIPEYWPDFSRELFFHALNQYNLRDR--RF 236
F+P++WPDF L + + RF
Sbjct: 272 EEGMGVARVRNTTKGPSVHFVPKFWPDFGILDVLPILLGWQAEEIFLRF 320
>gi|18148934|dbj|BAB83522.1| cis-prenyltransferase [Hevea brasiliensis]
Length = 284
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 71/259 (27%), Positives = 113/259 (43%), Gaps = 21/259 (8%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + P HI I+DGNGR+A LP GH+ G ++ E+G+K TI
Sbjct: 23 LYSILTQGPIPTHIAFILDGNGRFAKKHKLPEGGGHKAGFLALLNVLTYCYELGVKYATI 82
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLK---KGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI+N+RR E+ ++ L+ ++ + +I VR +GN LD+ +
Sbjct: 83 YAFSIDNFRRKPHEVQYVMNLMLEKIEGMIMEESIINAYDICVRFVGNLKLLDEPLKTAA 142
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSS--------- 168
+ T N+ L +A Y+S DEI A++ +D +D +
Sbjct: 143 DKIMRATAKNSKFVLLLAVCYTSTDEIVHAVEESSKDKLKSDEICNDGNGDCVIKIEEME 202
Query: 169 ------LIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELF 222
L+ +T P PD++IRT GE RLS++LLWQ WP+
Sbjct: 203 PYSEIKLVELERNTYINPYPDVLIRTSGETRLSNYLLWQTTNCILYSPHALWPEIGLRHV 262
Query: 223 FHALNQYNLRDRRFGGLSK 241
A+ R + L K
Sbjct: 263 VWAVI---NCQRHYSYLEK 278
>gi|88856093|ref|ZP_01130754.1| undecaprenyl pyrophosphate synthetase [marine actinobacterium
PHSC20C1]
gi|88814661|gb|EAR24522.1| undecaprenyl pyrophosphate synthetase [marine actinobacterium
PHSC20C1]
Length = 226
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 72/228 (31%), Positives = 116/228 (50%), Gaps = 9/228 (3%)
Query: 16 IIMDGNGRWAAARGLPRCAGHRKGIE-VFNEIVAAAAEVGIKNLTIFAFSINNW-RRPVS 73
+I+DGN RWA + L A + + E + ++ I T++ S +N R
Sbjct: 1 MIIDGNRRWAKLKDLETAAHGHRAGAAKYREFLVWCDDLDISVATLYLLSTDNLTGRSPE 60
Query: 74 EISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLF 133
E+ EL +I + + +V+ +G+ L D + L A D+T NTGL++
Sbjct: 61 ELGELFTIIGDLAE---DLSHFRDWRVQHVGSDAGLPDQLKAQLTGARDRTASNTGLHVN 117
Query: 134 IAFNYSSRDEISRAIKNIFQDIESGSVC----SHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+A Y R EI+ A++ I ++ + + LI ++L T+ PDPDL+IRT
Sbjct: 118 LAIGYGGRHEIAEAMRRIVRNHSEEGHSLDALAELLTPELIGEHLYTTGQPDPDLVIRTS 177
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
GE+R+SDF+LWQ A+SE F+ PD F AL ++ R+RR+G
Sbjct: 178 GEQRISDFMLWQTAHSELYFVEALGPDLREVDFLRALRDFSRRNRRYG 225
>gi|302306512|ref|NP_982925.2| ABL022Wp [Ashbya gossypii ATCC 10895]
gi|299788551|gb|AAS50749.2| ABL022Wp [Ashbya gossypii ATCC 10895]
Length = 401
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 67/253 (26%), Positives = 123/253 (48%), Gaps = 18/253 (7%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + P H+ IMDGN R+A + LP GH G + GI+ ++
Sbjct: 115 LLKILQMGPLPQHVSFIMDGNRRYAKSMNLPLKLGHEAGSVALMRTLHTCKRAGIEAVSA 174
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSL-----KKNNIKVRVIGNRLSLDDDILC 115
+AFSI N+ RP EI L +++ L+ + ++ V+G+R L ++
Sbjct: 175 YAFSIENFNRPKEEIDTLTEMLSRRLQDFANRATNLKDRMYGARLLVVGDRALLSPELND 234
Query: 116 VLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD 175
+ ED T+ NT ++I Y++R++I A+ ++ + ++G++ S D+ + ++ +
Sbjct: 235 KITYIEDMTKHNTAFTVYICLPYTTRNDIYHAMFDLVRLCQAGALDSKDISTEMLTNAMY 294
Query: 176 T-SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFV-FIPEYWPDFSRELFFHALNQY---- 229
++ D+++RT G RLSD++LWQV ++ F WPDF+ FF L ++
Sbjct: 295 LGANSNRADILVRTSGHTRLSDYMLWQVHEQSYIEFSNCMWPDFTFRTFFTILLKWSFVT 354
Query: 230 -------NLRDRR 235
R RR
Sbjct: 355 ALHEARKQERLRR 367
>gi|20563022|dbj|BAB92024.1| cis-prenyltransferase2 [Hevea brasiliensis]
Length = 290
Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats.
Identities = 68/265 (25%), Positives = 112/265 (42%), Gaps = 27/265 (10%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + P HI I+DGN R+A LP GH+ G ++ E+G+K TI
Sbjct: 23 LYSILTQGPIPTHIAFILDGNRRFAKKHKLPEGGGHKAGFLALLNVLTYCYELGVKYATI 82
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLK---KGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI+N+RR E+ ++ L+ ++ + +I VR +GN L + +
Sbjct: 83 YAFSIDNFRRKPHEVQYVMDLMLEKIEGMIMEESIINAYDICVRFVGNLKLLSEPVKTAA 142
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDS---------- 167
+ T N+ L IA Y+S DEI A++ + + + +++
Sbjct: 143 DKIMRATANNSKCVLLIAVCYTSTDEIVHAVEESSELNSNEVCANQELEEANATGSGTVI 202
Query: 168 -----------SLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPD 216
L+ +T P PD++IRT GE RLS++LLWQ WP+
Sbjct: 203 QIENMESYSGIKLVDLEKNTYINPYPDVLIRTSGETRLSNYLLWQTTNCILDSPHALWPE 262
Query: 217 FSRELFFHALNQYNLRDRRFGGLSK 241
A+ R + L K
Sbjct: 263 IGLRHVVWAVI---NCQRHYSYLEK 284
>gi|22213585|gb|AAM92880.1| cis-prenyltransferase 1 [Hevea brasiliensis]
gi|22213603|gb|AAM92889.1| cis-prenyltransferase 10 [Hevea brasiliensis]
gi|22213605|gb|AAM92890.1| cis-prenyltransferase 11 [Hevea brasiliensis]
Length = 290
Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 67/265 (25%), Positives = 113/265 (42%), Gaps = 27/265 (10%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + P HI I+DGN R+A LP GH+ G ++ E+G+K TI
Sbjct: 23 LYSILTQGPIPTHIAFILDGNRRFAKKHKLPEGGGHKAGFLALLNVLTYCYELGVKYATI 82
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLK---KGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI+N+RR E+ ++ L+ ++ + +I VR +GN L + +
Sbjct: 83 YAFSIDNFRRKPHEVQYVMDLMLEKIEGMIMEESIINAYDICVRFVGNLKLLSEPVKTAA 142
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDS---------- 167
+ T N+ L IA Y+S DEI A++ + + + +++
Sbjct: 143 DKIMRATANNSKCVLLIAVCYTSTDEIVHAVEESSELNSNEVCNNQELEEANATGSSTVI 202
Query: 168 -----------SLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPD 216
L+ +T P PD++IRT GE RLS++LLWQ WP+
Sbjct: 203 QTENMESYSGIKLVDLEKNTYINPYPDVLIRTSGETRLSNYLLWQTTNCILYSPYALWPE 262
Query: 217 FSRELFFHALNQYNLRDRRFGGLSK 241
++ + R + L K
Sbjct: 263 IGLRHVVWSVINFQ---RHYSYLEK 284
>gi|22213587|gb|AAM92881.1| cis-prenyltransferase 2 [Hevea brasiliensis]
Length = 290
Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 67/265 (25%), Positives = 113/265 (42%), Gaps = 27/265 (10%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + P HI I+DGN R+A LP GH+ G ++ E+G+K TI
Sbjct: 23 LYSILTQGPIPTHIAFILDGNRRFAKKHKLPEGGGHKAGFLALLNVLTYCYELGVKYATI 82
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLK---KGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI+N+RR E+ ++ L+ ++ + +I VR +GN L + +
Sbjct: 83 YAFSIDNFRRKPHEVQYVMDLMLEKIEGMIMEESIINAYDICVRFVGNLKLLSEPVKTAA 142
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDS---------- 167
+ T N+ L IA Y+S DEI A++ + + + +++
Sbjct: 143 DKIMRATANNSKCVLLIAVCYTSTDEIVHAVEESSELNSNEVCNNQELEEANATGSSTVI 202
Query: 168 -----------SLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPD 216
L+ +T P PD++IRT GE RLS++LLWQ WP+
Sbjct: 203 QTENMESYSGIKLVDLEKNTYINPYPDVLIRTSGETRLSNYLLWQTTNCILYSPYALWPE 262
Query: 217 FSRELFFHALNQYNLRDRRFGGLSK 241
++ + R + L K
Sbjct: 263 IGLRHVVWSVINFQ---RHYSYLEK 284
>gi|71005722|ref|XP_757527.1| hypothetical protein UM01380.1 [Ustilago maydis 521]
gi|46096650|gb|EAK81883.1| hypothetical protein UM01380.1 [Ustilago maydis 521]
Length = 357
Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 66/257 (25%), Positives = 115/257 (44%), Gaps = 31/257 (12%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEV-GIKNLTIFAFSIN 66
P HI +MDGN RWA GH G ++ + G+ +T++AF+I+
Sbjct: 89 GPIPRHIAFVMDGNRRWARTSHHSIQHGHLTGFATLKSVLEVCLNLDGLDTVTVYAFAID 148
Query: 67 NWRRPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
N+RR +E+S L+++ K+ L + + + +++VR+ G + L D+ ++ E+
Sbjct: 149 NFRRSEAEVSTLMQIAKTRLIELAGHGELIARYSVRVRIAGRKDLLPADVREAVERMENM 208
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQD----------------------IESGSVC 161
T+ NT L I Y+SRDEI+ A + S
Sbjct: 209 TKHNTRATLNICMPYASRDEITGAARTCLDRKLRHVERAAVAAQAQQIAQNNSHSSLHHL 268
Query: 162 SHDVDSSL----IAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSE-FVFIPEYWPD 216
D+D S+ + + + P D+++RT G RLSDF+LWQ S F+ ++WP
Sbjct: 269 LDDIDFSISAQDLEHNMQLAHSPPLDILVRTSGVSRLSDFMLWQCTDSTHLHFVDKFWPQ 328
Query: 217 FSRELFFHALNQYNLRD 233
F + ++ +
Sbjct: 329 FGLVDLIPIILEWQRQQ 345
>gi|134110838|ref|XP_775883.1| hypothetical protein CNBD2910 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258549|gb|EAL21236.1| hypothetical protein CNBD2910 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 279
Score = 195 bits (497), Expect = 4e-48, Method: Composition-based stats.
Identities = 67/251 (26%), Positives = 117/251 (46%), Gaps = 21/251 (8%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
P H+ +MDGN R+A G +GH +G + + I+ ++I+AF+I+N
Sbjct: 27 GPIPHHVAFVMDGNRRYARELGQQVESGHAEGFNALRRTLEICLRLRIRAVSIYAFAIDN 86
Query: 68 WRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
+ R E+ L+ L K L + L++ +K+R IG L D+L +++ E T
Sbjct: 87 FSRSEKEVGALMNLAKQRLAELCEHGDLLEEYGVKIRFIGQLDMLPPDVLQAVRDMEAMT 146
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYL---------- 174
+ N L + Y+SRDEI+ A+K + G + D+ + + L
Sbjct: 147 QDNKNGVLNVCCPYASRDEITTAMKESVRRAYEGELAPSDITAKDVFDSLGVSKAINTVD 206
Query: 175 ----DTSDVPD-PDLIIRTGGEKRLSDFLLWQVA-YSEFVFIPEYWPDFSRELFFHALNQ 228
+ P+ D+++RT KRLSDF++WQ + ++ F+ YWP+F L
Sbjct: 207 KSLFVNPEEPEKLDILVRTSDVKRLSDFMMWQASDDTQLHFVKTYWPEFGLSDMLPILLG 266
Query: 229 YNLR--DRRFG 237
+ + R+ G
Sbjct: 267 WQQKAWMRKLG 277
>gi|254585101|ref|XP_002498118.1| ZYRO0G02662p [Zygosaccharomyces rouxii]
gi|238941012|emb|CAR29185.1| ZYRO0G02662p [Zygosaccharomyces rouxii]
Length = 346
Score = 195 bits (497), Expect = 4e-48, Method: Composition-based stats.
Identities = 62/231 (26%), Positives = 108/231 (46%), Gaps = 7/231 (3%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ P HI IMDGN R+A +P GH G + ++G++ ++ +AFSI
Sbjct: 64 AGPVPQHISFIMDGNRRFAKKMNMPVKRGHEAGGVTLLSLCYVLKKMGVRCVSAYAFSIE 123
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNN-----IKVRVIGNRLSLDDDILCVLKEAE 121
N+ RP E++ L + L + +++++G+ + +++ +K E
Sbjct: 124 NFNRPPEEVNALTNMFAVKLDEFARKANDYRDPLYQSRLKIVGDHSLISEEMREKIKRVE 183
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ T LFI F Y+SR++I A + ++ S+ + K + +D
Sbjct: 184 EMTNDGDEFTLFICFPYTSRNDIWHATQTSVEECVQQSLEPRALTVEEFNKKMYLNDYSH 243
Query: 182 -PDLIIRTGGEKRLSDFLLWQVAYS-EFVFIPEYWPDFSRELFFHALNQYN 230
DL+IRT G RLSD++LWQV S + F P WPDF + + ++
Sbjct: 244 KCDLLIRTSGHLRLSDYMLWQVHESGDIKFSPTLWPDFKFFQLYLMILNWS 294
>gi|156054508|ref|XP_001593180.1| hypothetical protein SS1G_06102 [Sclerotinia sclerotiorum 1980]
gi|154703882|gb|EDO03621.1| hypothetical protein SS1G_06102 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 353
Score = 194 bits (493), Expect = 9e-48, Method: Composition-based stats.
Identities = 78/305 (25%), Positives = 125/305 (40%), Gaps = 71/305 (23%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ +MDGN R+A + + GH G E I+ + G+K +T+
Sbjct: 30 LIGALRQGPIPQHVAFVMDGNRRFARSHKIETVEGHNLGFEALARILEVCYKSGVKVVTV 89
Query: 61 FAFSINNWRRPVSEISELVKLIKSF---LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+++ K L + L + VRV+G R + DD+L +
Sbjct: 90 YAFSIENFKRSKYEVDALMEMAKVKLVQLAQHGDLLDRYGASVRVLGQRNLVKDDVLEAI 149
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL-IAKYLDT 176
A + T+ N L I F Y+SRDEI+ AIK ++ + S I + L +
Sbjct: 150 DRAVEMTKNNGDCALNICFPYTSRDEITTAIKTTVENYSKPTYTQQRPFSQTRITQKLKS 209
Query: 177 SDV----------------------------------------------PDPDL------ 184
+V PDP+L
Sbjct: 210 RNVNSVSNQDLREISPTPSSRSEPDESVSSSTTLNPESSTTSSPEAGVFPDPELISVDTL 269
Query: 185 --------------IIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFFHALNQY 229
+IRT G RLSDF+LWQ +E VF+ WP+F F L ++
Sbjct: 270 AENLFTAGDPPLDLLIRTSGVNRLSDFMLWQCHEDTEIVFLDCLWPEFDLWQFLPVLVEW 329
Query: 230 NLRDR 234
+ +
Sbjct: 330 QWKQK 334
>gi|60617766|gb|AAX31281.1| cis-prenyltransferase [Hevea brasiliensis]
Length = 290
Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 65/265 (24%), Positives = 111/265 (41%), Gaps = 27/265 (10%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P H+ I+DGN R+A LP GH+ G ++ E+G+K TI
Sbjct: 23 LYGILTQGPIPTHLAFILDGNRRFAKKHKLPEGGGHKAGFLALLNVLTYCYELGVKYATI 82
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI+N+RR E+ ++ L+ + + +I VR +GN L + +
Sbjct: 83 YAFSIDNFRRKPHEVQYVMDLMLEKIDGMIKEESIINAYDICVRFVGNLKLLSEPVKTAA 142
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDS---------- 167
+ T N+ L +A Y+S DEI A++ + + + +++
Sbjct: 143 DKIMRATANNSKCVLLLAVCYTSTDEIVHAVEESSELNSNEVCNNQELEEANATGSSTVI 202
Query: 168 -----------SLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPD 216
L+ +T P PD++IRT GE RLS++LLWQ WP+
Sbjct: 203 QTENMESYSGIKLVDLEKNTYINPYPDVLIRTSGETRLSNYLLWQTTNCILYSPYALWPE 262
Query: 217 FSRELFFHALNQYNLRDRRFGGLSK 241
++ + R + L K
Sbjct: 263 IGLRHVVWSVINFQ---RHYSYLEK 284
>gi|331236692|ref|XP_003331004.1| hypothetical protein PGTG_12967 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309309994|gb|EFP86585.1| hypothetical protein PGTG_12967 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 320
Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 67/277 (24%), Positives = 133/277 (48%), Gaps = 36/277 (12%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ ++ P HI IMDGN R++ +G+ GH +G ++ +G+ ++T++
Sbjct: 36 IEALKLGPIPKHISFIMDGNRRYSREQGISIQQGHFRGFLSLKRLLEFLLRLGVSHITVY 95
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLK 118
AF+I+N+RR EI +L+ + KS + + ++ I+VR++G L D+ ++
Sbjct: 96 AFAIDNYRRTAEEIEKLMDMGKSKMLEICERGELFERFGIRVRMVGRVDLLPPDVQVLVA 155
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
+ T N + IAF+YS+++EI+ AI Q+ + +D +A +L T+
Sbjct: 156 RVQALTAKNNRGVINIAFSYSAQEEIASAITQTVQEAMDRKISPSSIDIDTLASHLYTTH 215
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQV--------------------------------AYSE 206
P D+++R+ G R+SD+LLWQ+ +
Sbjct: 216 TPPLDMLVRSSGVNRISDYLLWQLIINSTRYVKNNEEETTDDWGNHTPIKLDRNIVEGAA 275
Query: 207 FVFIPEYWPDFSRELFFHALNQYNLRD-RRFGGLSKK 242
+ +P +WP+F + + ++ L + R++ GL+ +
Sbjct: 276 YHIVPTHWPNFGMDDMVPIILKWQLGEFRKYLGLTTE 312
>gi|328350485|emb|CCA36885.1| cis-prenyltransferase, dehydrodolichyl diphosphate synthase [Pichia
pastoris CBS 7435]
Length = 276
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 70/239 (29%), Positives = 126/239 (52%), Gaps = 6/239 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + + P HI ++MDGN R+A G+ +GH G + +++ VG+K +TI
Sbjct: 24 IINVVKTGPVPQHIALVMDGNRRYAKVNGIQLRSGHDAGADALVDVLGCCYRVGVKAVTI 83
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLK---KNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N+ R +EI+ L++L+K L + + N+++ ++GN+ + D+ L
Sbjct: 84 YAFSIENFNRSQAEINTLLELLKQKLLYLSDTSHYAERYNVRINIVGNKDMIPDEFRSDL 143
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+ E+ TR +T L + F ++SRD+I+ +I N+ + S + D++ ++ +
Sbjct: 144 DKVEELTRYHTKRTLNVCFPFTSRDDITSSIANVANRVLSKELAVADINLQQVSNSVIDR 203
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAY---SEFVFIPEYWPDFSRELFFHALNQYNLRD 233
P D++IRT G RLSDFL WQ++ S VF WP+F L ++
Sbjct: 204 TSPPLDILIRTSGHTRLSDFLTWQLSQNPTSTVVFTNTLWPNFKFWQMMWILLTWSYYQ 262
>gi|256079777|ref|XP_002576161.1| dehydrodolichyl diphosphate synthase (dedol-pp synthase)
[Schistosoma mansoni]
gi|238661423|emb|CAZ32396.1| dehydrodolichyl diphosphate synthase (dedol-pp synthase), putative
[Schistosoma mansoni]
Length = 277
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 69/234 (29%), Positives = 110/234 (47%), Gaps = 39/234 (16%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ ++ P H+ IMDGN R+A + L + GH G +E + ++GI+ ++IF
Sbjct: 18 LHAIKYGPIPKHVAFIMDGNRRFADGKMLKKSDGHLHGFTKLSETLQWCRDIGIEEVSIF 77
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCVLK 118
FSI+N+ R E+S L+ L + L++ LK ++I +RVIGN L + +
Sbjct: 78 TFSIDNFNRSHEEVSFLMNLAEEKLQELLDNKDELKADDICIRVIGNLALLPAKVQSLAA 137
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
+ TR ++ +D+ L++K L T
Sbjct: 138 QLMLVTRNHS----------------------------------NDITRELLSKCLYTRL 163
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFV--FIPEYWPDFSRELFFHALNQYN 230
DL+IRT GE RLSDFL WQV+ ++ + FI YWP+FS F ++ Y
Sbjct: 164 SKPLDLLIRTSGEIRLSDFLTWQVSENDTIYKFINNYWPEFSWWDFLSSIIHYQ 217
>gi|302660453|ref|XP_003021906.1| hypothetical protein TRV_03995 [Trichophyton verrucosum HKI 0517]
gi|291185825|gb|EFE41288.1| hypothetical protein TRV_03995 [Trichophyton verrucosum HKI 0517]
Length = 292
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 64/237 (27%), Positives = 115/237 (48%), Gaps = 18/237 (7%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + P HI II DGN RWA + L I+ ++GI+ +T
Sbjct: 20 LMNIVQQGPVPKHIAIIADGNRRWAKSSEL--------------NILDLFFDIGIECVTA 65
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF-YSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
+ FSI N++RP ++ +L+ + +++++K S K I+ RV+G L + I ++++
Sbjct: 66 YLFSIENFKRPKEQVDDLMDIFETWIQKYLSPSPNKRKIRFRVLGRLELLPEKIRKLIEK 125
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVC--SHDVDSSLIAKYLDTS 177
++T + F+Y+SRDE++RAI+ ++ + + I +D
Sbjct: 126 LVEKTADYDEGTFNVCFSYTSRDEMARAIEMTVRNYNESPKNGGKGKITAETIDNNMDIC 185
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFV-FIPEYWPDFSRELFFHALNQYNLRD 233
+ P D++IRT G RLSDFLLWQ + + +WP F F A+ + +
Sbjct: 186 NDPPLDVLIRTSGVCRLSDFLLWQCHRDTVIEVLDIHWPGFRYWHLFLAVLGWQRKK 242
>gi|255582899|ref|XP_002532221.1| undecaprenyl diphosphate synthase, putative [Ricinus communis]
gi|223528078|gb|EEF30152.1| undecaprenyl diphosphate synthase, putative [Ricinus communis]
Length = 331
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 67/300 (22%), Positives = 105/300 (35%), Gaps = 73/300 (24%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P H+ +MDGN R+A L AGH+ G I+ ++ +K +T++AFS
Sbjct: 20 LSMGPIPGHLSFLMDGNRRFAKKENLETGAGHKAGSSALITILKYCYDLRVKYVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N+ RP E+ ++ L+ + + ++ I+V IGN LD + ++
Sbjct: 80 IENFNRPPHEVQTVMDLMLETTEGLLKEESVVHQHGIRVHFIGNLKLLDKPLRVAAEKVM 139
Query: 122 DQTRLNTGLNLFIAFNYSSRD--------------------------------------- 142
T NT L I YSS D
Sbjct: 140 RATSKNTKYVLLICVAYSSSDEIIHAVQESCKEKWNKIEHSKVSRGEVKVEVGNKNTDNA 199
Query: 143 ------EISRAIKNIFQDIESGSVCSHDVDSSL-------------------------IA 171
EI + + D +L +
Sbjct: 200 TTCGAREICKNVTANASQRSGFGDKWDDEGQALWETRTGNRDEERAKMQSHSIIKQVDVE 259
Query: 172 KYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
K + + PDPD++IRT GE RLS+FLLWQ + WP+F A+ +
Sbjct: 260 KPMYMAVAPDPDILIRTSGETRLSNFLLWQASNCPLYSPDVLWPEFGLRHLVWAVLNFQR 319
>gi|254565945|ref|XP_002490083.1| Cis-prenyltransferase involved in synthesis of long-chain dolichols
[Pichia pastoris GS115]
gi|238029879|emb|CAY67802.1| Cis-prenyltransferase involved in synthesis of long-chain dolichols
[Pichia pastoris GS115]
Length = 279
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 70/239 (29%), Positives = 126/239 (52%), Gaps = 6/239 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + + P HI ++MDGN R+A G+ +GH G + +++ VG+K +TI
Sbjct: 27 IINVVKTGPVPQHIALVMDGNRRYAKVNGIQLRSGHDAGADALVDVLGCCYRVGVKAVTI 86
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLK---KNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N+ R +EI+ L++L+K L + + N+++ ++GN+ + D+ L
Sbjct: 87 YAFSIENFNRSQAEINTLLELLKQKLLYLSDTSHYAERYNVRINIVGNKDMIPDEFRSDL 146
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+ E+ TR +T L + F ++SRD+I+ +I N+ + S + D++ ++ +
Sbjct: 147 DKVEELTRYHTKRTLNVCFPFTSRDDITSSIANVANRVLSKELAVADINLQQVSNSVIDR 206
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAY---SEFVFIPEYWPDFSRELFFHALNQYNLRD 233
P D++IRT G RLSDFL WQ++ S VF WP+F L ++
Sbjct: 207 TSPPLDILIRTSGHTRLSDFLTWQLSQNPTSTVVFTNTLWPNFKFWQMMWILLTWSYYQ 265
>gi|40716449|gb|AAR88763.1| cis-prenyltransferase [Hevea brasiliensis]
Length = 290
Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats.
Identities = 65/265 (24%), Positives = 112/265 (42%), Gaps = 27/265 (10%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P H+ I+DGN R+A LP GH+ G ++ E+G+K TI
Sbjct: 23 LYGILTQGPIPTHLAFILDGNRRFAKKHKLPEGGGHKAGFLALLNVLTYCYELGVKYATI 82
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLK---KGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI+N+RR E+ ++ L+ ++ + +I VR +GN L + +
Sbjct: 83 YAFSIDNFRRKPHEVQYVMNLMLEKIEGMIMEESIINAYDICVRFVGNLKLLSEPVKTAA 142
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDS---------- 167
+ T N+ L +A Y+S DEI A++ + + + +++
Sbjct: 143 DKIMRATANNSKCVLLLAVCYTSTDEIVHAVEESSELNSNEVCNNQELEEANATGSGTVI 202
Query: 168 -----------SLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPD 216
L+ +T P PD++IRT GE RLS++LLWQ WP+
Sbjct: 203 QTENMESYSGIKLVDLEKNTYINPYPDVLIRTSGETRLSNYLLWQTTNCILYSPYALWPE 262
Query: 217 FSRELFFHALNQYNLRDRRFGGLSK 241
++ + R + L K
Sbjct: 263 IGLRHVVWSVINFQ---RHYSYLEK 284
>gi|148469574|gb|ABQ65716.1| cis-prenyltransferase [Hevea brasiliensis]
Length = 290
Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats.
Identities = 65/265 (24%), Positives = 112/265 (42%), Gaps = 27/265 (10%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P H+ I+DGN R+A LP GH+ G ++ E+G+K TI
Sbjct: 23 LYGILTQGPIPTHLAFILDGNRRFAKKHKLPEGGGHKAGFLALLNVLTYCYELGVKYATI 82
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLK---KGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI+N+RR E+ ++ L+ ++ + +I VR +GN L + +
Sbjct: 83 YAFSIDNFRRKPHEVQYVMDLMLEKIEGMIMEESIINAYDICVRFVGNLKLLSEPVKTAA 142
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDS---------- 167
+ T N+ L +A Y+S DEI A++ + + + +++
Sbjct: 143 DKIMRATANNSKCVLLLAVCYTSTDEIVHAVEESSELNSNEVCNNQELEEANATGSGTVI 202
Query: 168 -----------SLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPD 216
L+ +T P PD++IRT GE RLS++LLWQ WP+
Sbjct: 203 QTENMESYSGIKLVDLEKNTYINPYPDVLIRTSGETRLSNYLLWQTTNCILYSPYALWPE 262
Query: 217 FSRELFFHALNQYNLRDRRFGGLSK 241
++ + R + L K
Sbjct: 263 IGLRHVVWSVINFQ---RHYSYLEK 284
>gi|148698096|gb|EDL30043.1| dehydrodolichyl diphosphate synthase, isoform CRA_d [Mus musculus]
Length = 310
Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats.
Identities = 68/203 (33%), Positives = 108/203 (53%), Gaps = 6/203 (2%)
Query: 42 VFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKS---FLKKGFYSLKKNNI 98
+ +GI +T++AFSI N++R SE+ L+ L + L + L+K+ +
Sbjct: 34 ARLRTLRWCLNLGILEVTVYAFSIENFKRSKSEVDGLLDLARQKFSCLMEEQEKLQKHGV 93
Query: 99 KVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESG 158
+RV+G+ L D+ + A T+ L + F Y+SR EI+ A++ + +E G
Sbjct: 94 CIRVLGDLHLLPLDLQEKIAHAIQATKNYNKCFLNVCFAYTSRHEIANAVREMAWGVEQG 153
Query: 159 SVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS 218
+ DV SL+ K L ++ P PD++IRT GE RLSDFLLWQ ++S VF P WP+++
Sbjct: 154 LLEPSDVSESLLDKCLYSNHSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYT 213
Query: 219 RELFFHALNQYNLRDRRFGGLSK 241
A+ Q+ R G L K
Sbjct: 214 FWNLCEAILQFQ---RNHGALQK 233
>gi|323454443|gb|EGB10313.1| hypothetical protein AURANDRAFT_58856 [Aureococcus anophagefferens]
Length = 223
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 74/225 (32%), Positives = 121/225 (53%), Gaps = 6/225 (2%)
Query: 18 MDGNGRWAAARGLP--RCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEI 75
MDGN R+ A R P R GH G E+V G+ +T FAFS NW R +E+
Sbjct: 1 MDGNRRFGAKRFGPARRLEGHAAGGRKLGEVVDWCLRAGVAEVTAFAFSTENWHRDSAEV 60
Query: 76 SELVKLIKSFLKKGFYSLKKNNIKVRVIG-NRLSLDDDILCVLKEAEDQTRLNTG-LNLF 133
+ L++ + ++ ++ V+ + L D+ L+ E +T L L
Sbjct: 61 ALLMRTFVDQCSEILKHAREKRVRCDVLCTDATRLPADVRAALETLETETAFADAALTLH 120
Query: 134 IAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKR 193
+A +Y +R EI+RA + + + + +G + + DVD + + L PDL++RT GE+R
Sbjct: 121 LAVSYGARGEIARAARKLAERVAAGEMDAGDVDEASLGAALALR--SPPDLLVRTSGERR 178
Query: 194 LSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
LS+FLLWQ+AY+E VF+ ++WP+ + + F L++Y R RR+G
Sbjct: 179 LSNFLLWQMAYTELVFLDKHWPELAEDDFDAVLDEYARRQRRYGK 223
>gi|164605016|dbj|BAF98304.1| cis-prenyl transferase [Hevea brasiliensis]
Length = 290
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 64/265 (24%), Positives = 111/265 (41%), Gaps = 27/265 (10%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P H+ I+DGN R+A LP GH+ G ++ E+G+K TI
Sbjct: 23 LYGILTQGPIPTHLAFILDGNRRFAKKHKLPEGGGHKAGFLALLNVLTYCYELGVKYATI 82
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLK---KGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI+N+RR E+ ++ L+ ++ + +I VR +GN L + +
Sbjct: 83 YAFSIDNFRRKPHEVQYVMDLMLEKIEGMIMEESIINAYDICVRFVGNLKLLSEPVKTAA 142
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDS---------- 167
+ T N+ L +A Y+S DEI A++ + + + +++
Sbjct: 143 DQIMRATANNSKCVLLLAVCYTSTDEIVHAVEESSELNSNEVCNNQELEEANATGSSTVI 202
Query: 168 -----------SLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPD 216
L+ +T P PD++IR GE RLS++LLWQ WP+
Sbjct: 203 QTENMESYSGIKLVDLEKNTYINPYPDVLIRASGETRLSNYLLWQTTNCILYSPYALWPE 262
Query: 217 FSRELFFHALNQYNLRDRRFGGLSK 241
++ + R + L K
Sbjct: 263 IGLRHVVWSVINFQ---RHYSYLEK 284
>gi|164605018|dbj|BAF98305.1| cis-prenyl transferase [Hevea brasiliensis]
Length = 296
Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats.
Identities = 71/271 (26%), Positives = 117/271 (43%), Gaps = 33/271 (12%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P H+ I+DGN R+A LP GH+ G ++ E+G+K TI
Sbjct: 23 LYGILTQGPIPTHLAFILDGNRRFAKKHKLPEGGGHKAGFLALLNVLTYCYELGVKYATI 82
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLK---KGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI+N+RR E+ ++ L+ ++ + +I VR +GN L + +
Sbjct: 83 YAFSIDNFRRKPHEVQYVMDLMLEKIEGMIMEESIINAYDICVRFVGNLKLLSEPVKTAA 142
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI-ESGSVCSHDVDSS-------- 168
++ T N+ L IA YSS DEI A++ +D S VC++ +++
Sbjct: 143 DQSMRATANNSRFVLLIAVAYSSTDEIVHAVEESSKDKLNSNEVCNNGIEAEQEFKEANG 202
Query: 169 ------------------LIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFI 210
L+ +T P PD++IRT GE RLS++LLWQ
Sbjct: 203 TGNSVIPVQKTESYSGIKLVDLEKNTYINPYPDVLIRTSGETRLSNYLLWQTTNCILYSP 262
Query: 211 PEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
WP+ ++ + R + L K
Sbjct: 263 YALWPEIGLRHVVWSVINFQ---RHYSYLEK 290
>gi|239943139|ref|ZP_04695076.1| undecaprenyl diphosphate synthase [Streptomyces roseosporus NRRL
15998]
gi|239989597|ref|ZP_04710261.1| undecaprenyl diphosphate synthase [Streptomyces roseosporus NRRL
11379]
Length = 233
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 64/224 (28%), Positives = 112/224 (50%), Gaps = 8/224 (3%)
Query: 15 GIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSE 74
+I+DGN RWA G GH G E++ ++G++ +T++ S +N RR +E
Sbjct: 2 ALILDGNRRWATVHGRTASEGHEAGFSRVPEVLRWCHDLGVETVTLWLLSTDNLRRDPAE 61
Query: 75 ISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFI 134
+ L+++I + S + ++R G R + + +L L E +T NTG+ + +
Sbjct: 62 VDALMRIITDLVNGLAAS---DRWRLRHRGVRAMVPEPLLTALDEVAARTTDNTGMRVNL 118
Query: 135 AFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSDVPDPDLIIRTGG 190
A Y R+E++ A + + + + + V + + + + +D P P+L++RT G
Sbjct: 119 AICYGGREEVTEACRELLEGYAHEGLSPAEAARRVTAEAVTEAIA-ADDPAPELVVRTSG 177
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
E+R S FLLW ++E F YWPDF + AL Y R R
Sbjct: 178 EQRSSGFLLWTARHAEHYFTTTYWPDFGYDDLKAALTHYERRSR 221
>gi|302530104|ref|ZP_07282446.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. AA4]
gi|302438999|gb|EFL10815.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. AA4]
Length = 260
Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats.
Identities = 64/213 (30%), Positives = 109/213 (51%), Gaps = 8/213 (3%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCA-GHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + P HI I++DGN RWA G A GHR G + + ++ E ++ +T+
Sbjct: 13 LIQQSAGRHPRHIAIMLDGNRRWAREAGFTDVADGHRAGAKKIADFLSWCQEADVEVVTM 72
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ S +N R E++ L+K+I + + + ++R++G L ++ L A
Sbjct: 73 WLLSTDNLNRDPDELTPLLKIITDVTDEL--AGAEAPWRLRIVGALDLLPLEVAQKLTAA 130
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLDT 176
+T ++G+ + IA Y R EI+ A++ + ++ D I+++L T
Sbjct: 131 AARTENHSGMEVNIAVGYGGRQEIADAVRKLLLQHADEGTSIRELAKILDVDHISEHLYT 190
Query: 177 SDVPDPDLIIRTGGEKRLSDFLL-WQVAYSEFV 208
S PDPDLIIRT GE+RLS FLL + AY+ F+
Sbjct: 191 SGQPDPDLIIRTSGEQRLSGFLLTFGDAYATFI 223
>gi|156845438|ref|XP_001645610.1| hypothetical protein Kpol_1033p59 [Vanderwaltozyma polyspora DSM
70294]
gi|156116275|gb|EDO17752.1| hypothetical protein Kpol_1033p59 [Vanderwaltozyma polyspora DSM
70294]
Length = 348
Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 61/230 (26%), Positives = 108/230 (46%), Gaps = 7/230 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M+ + + P+HI IMDGN +A +P GH G +V A +G++ ++
Sbjct: 59 MINIIKTGRVPEHISFIMDGNRTYAKNLNMPIKKGHEAGGITLLSLVYACKRMGVRCVSA 118
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKK-----NNIKVRVIGNRLSLDDDILC 115
+AFSI N+ RP E+ L L L + K K++++G+ + D++
Sbjct: 119 YAFSIENFNRPKDEVDTLNNLFADKLDEFAIRAKDFQDPLYGAKIKIVGDATMIGDEMKR 178
Query: 116 VLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD 175
+K E T+ L+I + Y+SR++I A++ + + + ++ + +
Sbjct: 179 RIKRVEKITQDGEDFILYICYPYTSRNDIYHAVQRSVEQTLNNEISKDEITIKHFTENMY 238
Query: 176 T-SDVPDPDLIIRTGGEKRLSDFLLWQVA-YSEFVFIPEYWPDFSRELFF 223
S DL++RT G KRLSD++LWQ + F WPDF+ +
Sbjct: 239 LESFSNRCDLLVRTSGHKRLSDYMLWQTHENATIDFHSGLWPDFTFIKLY 288
>gi|229822230|ref|YP_002883756.1| Di-trans-poly-cis-decaprenylcistransferase [Beutenbergia cavernae
DSM 12333]
gi|229568143|gb|ACQ81994.1| Di-trans-poly-cis-decaprenylcistransferase [Beutenbergia cavernae
DSM 12333]
Length = 264
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 74/240 (30%), Positives = 112/240 (46%), Gaps = 11/240 (4%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARG-LPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ ++ + P H+G++MDGN RWA G L GHR G E + ++ A GI +
Sbjct: 24 LERALAGAPVPRHVGLVMDGNRRWARLAGSLDPRVGHRAGAEHLSVVLGWCARAGIDRAS 83
Query: 60 IFAFSINNW-RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
++ S N +R E++ L+ L+++ + + + + V G+ L D LK
Sbjct: 84 VYVLSAANIAKRGPDEVAHLMTLLETTIARQRRDDAE--WSLAVAGSLDLLPDRTAHALK 141
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCS----HDVDSSLIAKYL 174
EA D T +L +A Y +EI+ A++ D + D+ + A L
Sbjct: 142 EAIDATAGRPR-SLTLAIGYDPHEEIAAAVRAHLADAADDAGRPGATLTDLARAFDADDL 200
Query: 175 D--TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLR 232
D D DL+IRT GE+RLS F W+ A +E VF YWP F R F AL Y R
Sbjct: 201 DARIPGGSDIDLVIRTSGERRLSGFFPWRSAGAELVFCDVYWPGFRRLDFLRALRTYAQR 260
>gi|312438360|gb|ADQ77431.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus TCH60]
Length = 164
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 67/164 (40%), Positives = 98/164 (59%)
Query: 79 VKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNY 138
+ L +FLK L + N+KV IG L + + A+++T NTGL L A NY
Sbjct: 1 MNLPVNFLKTFLPELIEKNVKVETIGFTDKLPKSTIEAINNAKEKTANNTGLKLIFAINY 60
Query: 139 SSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFL 198
R E+ +IKN+F ++ + S +D + I +L T D PDP+L+IRT GE+R+S+FL
Sbjct: 61 GGRAELVHSIKNMFDELHQQGLNSDIIDETYINNHLMTKDYPDPELLIRTSGEQRISNFL 120
Query: 199 LWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+WQV+YSEF+F + WPDF + + Y R RRFGGLS++
Sbjct: 121 IWQVSYSEFIFNQKLWPDFDEDELIKCIKIYQSRQRRFGGLSEE 164
>gi|50304307|ref|XP_452103.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641235|emb|CAH02496.1| KLLA0B12848p [Kluyveromyces lactis]
Length = 361
Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 62/237 (26%), Positives = 116/237 (48%), Gaps = 10/237 (4%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
MV + P H+ IMDGN R+A P GHR G +I+ + + +++
Sbjct: 71 MVRILRMGPVPRHLSFIMDGNRRYAKKLDQPVKEGHRAGGATLIDILHICRRLNVSSVSA 130
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKK-----NNIKVRVIGNRLSLDDDILC 115
+AFSI N+ R E++ L++L+ ++ + I++RV+G+ L +++L
Sbjct: 131 YAFSIENFNRSPQEVATLMELLGYYIDQFTERATNAKDELYGIRLRVVGDLSLLSEELLK 190
Query: 116 VLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD 175
++ AE TR L++A Y+SR++I+ +++ + D+ + +
Sbjct: 191 KIRNAEKLTRDGQEFVLYLALPYTSRNDIAHSMQVTTDKC---INSNEDITEQALTDNMY 247
Query: 176 TSDVPD-PDLIIRTGGEKRLSDFLLWQVAYSEFV-FIPEYWPDFSRELFFHALNQYN 230
+ DL+IRT G RLSD++LWQV + F+ WPDF+ + + +++
Sbjct: 248 FEQYSNKCDLLIRTSGHTRLSDYMLWQVHEGSIIEFVDCLWPDFNFWRLYWIMLKWS 304
>gi|6323748|ref|NP_013819.1| Srt1p [Saccharomyces cerevisiae S288c]
gi|2501565|sp|Q03175|SRT1_YEAST RecName: Full=Putative dehydrodolichyl diphosphate synthase;
Short=DEDOL-PP synthase
gi|854438|emb|CAA89902.1| unknown [Saccharomyces cerevisiae]
gi|4126459|dbj|BAA36578.1| cis-prenyltransferase homologue [Saccharomyces cerevisiae]
gi|151946257|gb|EDN64488.1| cis-prenyltransferase [Saccharomyces cerevisiae YJM789]
gi|190408330|gb|EDV11595.1| hypothetical protein SCRG_01991 [Saccharomyces cerevisiae RM11-1a]
gi|256269980|gb|EEU05230.1| Srt1p [Saccharomyces cerevisiae JAY291]
gi|285814103|tpg|DAA09998.1| TPA: Srt1p [Saccharomyces cerevisiae S288c]
Length = 343
Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 68/249 (27%), Positives = 120/249 (48%), Gaps = 18/249 (7%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P+H+ IMDGN R+A +R LP GH G ++ +G+K ++
Sbjct: 57 LIKALRVGPVPEHVSFIMDGNRRYAKSRRLPVKKGHEAGGLTLLTLLYICKRLGVKCVSA 116
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKK-----NNIKVRVIGNRLSLDDDILC 115
+AFSI N+ RP E+ L+ L L + K K+R++G++ L ++
Sbjct: 117 YAFSIENFNRPKEEVDTLMNLFTVKLDEFAKRAKDYKDPLYGSKIRIVGDQSLLSPEMRK 176
Query: 116 VLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD 175
+K+ E+ T+ LFI F Y+SR+++ I++ +D S ++ +
Sbjct: 177 KIKKVEEITQDGDDFTLFICFPYTSRNDMLHTIRDSVEDH--LENKSPRINIRKFTNKMY 234
Query: 176 TS-DVPDPDLIIRTGGEKRLSDFLLWQVA-YSEFVFIPEYWPDFS---------RELFFH 224
+L+IRT G +RLSD++LWQV + F WP+FS + FF
Sbjct: 235 MGFHSNKCELLIRTSGHRRLSDYMLWQVHENATIEFSDTLWPNFSFFAMYLMILKWSFFS 294
Query: 225 ALNQYNLRD 233
+ +YN ++
Sbjct: 295 TIQKYNEKN 303
>gi|259148674|emb|CAY81919.1| Srt1p [Saccharomyces cerevisiae EC1118]
Length = 343
Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 68/249 (27%), Positives = 120/249 (48%), Gaps = 18/249 (7%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P+H+ IMDGN R+A +R LP GH G ++ +G+K ++
Sbjct: 57 LIKALRVGPVPEHVSFIMDGNRRYAKSRRLPVKKGHEAGGLTLLTLLYICKRLGVKCVSA 116
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKK-----NNIKVRVIGNRLSLDDDILC 115
+AFSI N+ RP E+ L+ L L + K K+R++G++ L ++
Sbjct: 117 YAFSIENFNRPKEEVDTLMNLFTVKLDEFAKRAKDYKDPLYGSKIRIVGDQSLLSPEMRK 176
Query: 116 VLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD 175
+K+ E+ T+ LFI F Y+SR+++ I++ +D S ++ +
Sbjct: 177 KIKKVEEITQDGDDFTLFICFPYTSRNDMLHTIRDSVEDH--LENKSPRINIRKFTNKMY 234
Query: 176 TS-DVPDPDLIIRTGGEKRLSDFLLWQVA-YSEFVFIPEYWPDFS---------RELFFH 224
+L+IRT G +RLSD++LWQV + F WP+FS + FF
Sbjct: 235 MGFHSNKCELLIRTSGHRRLSDYMLWQVHENATIEFSDTLWPNFSFFAMYLMILKWSFFS 294
Query: 225 ALNQYNLRD 233
+ +YN ++
Sbjct: 295 TIQKYNEKN 303
>gi|294817708|ref|ZP_06776350.1| Undecaprenyl pyrophosphate synthetase [Streptomyces clavuligerus
ATCC 27064]
gi|326446583|ref|ZP_08221317.1| undecaprenyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
gi|294322523|gb|EFG04658.1| Undecaprenyl pyrophosphate synthetase [Streptomyces clavuligerus
ATCC 27064]
Length = 300
Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats.
Identities = 69/216 (31%), Positives = 109/216 (50%), Gaps = 4/216 (1%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+G+I+DGN RWA G A + +G ++V+ GI +T++A S +N RR
Sbjct: 77 PRHVGVILDGNRRWAEGHGTTLEAAYARGAARVADLVSWCETEGIAVVTVWALSRDNLRR 136
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
+ + ++ L G + + +I++ IG L L+ D+T +
Sbjct: 137 DAAAVGRILDATAVGLA-GIAASGRWHIRL--IGETDLLPAAPARRLRSVADRTATGSPG 193
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
L +A Y R +I+ A++ + + + V S + +YL T+ +PD DL+IRT G
Sbjct: 194 TLNVAVAYDGRADIAGAVRGLLRSG-VTGGTAAAVRESDVERYLSTAGLPDVDLVIRTSG 252
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHAL 226
E+RLS FL WQ AY+E F WP FS + F AL
Sbjct: 253 ERRLSGFLPWQTAYAELHFTAALWPAFSFDDFTVAL 288
>gi|255030984|ref|ZP_05302935.1| hypothetical protein LmonL_21017 [Listeria monocytogenes LO28]
Length = 177
Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats.
Identities = 64/162 (39%), Positives = 91/162 (56%)
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
+ L + N++V V+G R +L D + +++A T TGL L A N
Sbjct: 16 FNETSCRIFDSFVPELIEENVRVNVMGYRENLPDHTMRAVEKAIADTAHCTGLTLNFALN 75
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
Y R EI A K +++E + D+ + +L +S + DPDL+IRT GE RLS+F
Sbjct: 76 YGGRSEIITAAKEAMKELELEGKSADDLTEEKLNDHLMSSGLGDPDLLIRTSGELRLSNF 135
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+LWQ+AYSEF F +WPDFS+E F A+ +Y R RRFGGL
Sbjct: 136 MLWQLAYSEFYFTDTHWPDFSKEDFLQAIIEYQNRSRRFGGL 177
>gi|255018776|ref|ZP_05290902.1| hypothetical protein LmonF_15556 [Listeria monocytogenes FSL
F2-515]
Length = 179
Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats.
Identities = 67/173 (38%), Positives = 100/173 (57%)
Query: 30 LPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKG 89
LPR AGH++G++V + A +GI LT++AFS NW+RP E+ L+KL F
Sbjct: 7 LPRIAGHKEGMDVVKRVTRYANAIGIDVLTLYAFSTENWKRPTDEVDFLMKLPVEFFDSF 66
Query: 90 FYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIK 149
L + N++V V+G R +L D + +++A T TGL L A NY R EI A K
Sbjct: 67 VPELIEENVRVNVMGYRENLPDHTMRAVEKAIADTAHCTGLTLNFALNYGGRSEIITAAK 126
Query: 150 NIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQV 202
+++E + D+ + +L +S + DPDL+IRT GE RLS+F+LWQ+
Sbjct: 127 EAMKELELEGKSADDLTEEKLNDHLMSSGLGDPDLLIRTSGELRLSNFMLWQL 179
>gi|66357138|ref|XP_625747.1| hypothetical protein [Cryptosporidium parvum Iowa II]
gi|46226625|gb|EAK87604.1| conserved hypothetical protein [Cryptosporidium parvum Iowa II]
Length = 252
Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats.
Identities = 63/225 (28%), Positives = 117/225 (52%), Gaps = 7/225 (3%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
+H+ II+DGN R+A A G+ + GH++G + +I+ ++ +K +++F FS+ N+ R
Sbjct: 23 NHVAIILDGNRRYAKAMGISQLEGHKQGALLIKKILPLFIKLKVKYISMFVFSMENFSRN 82
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
+ + +IK ++ K L + N KV + G L ++L LK+ E +T+ N G+
Sbjct: 83 QENVDDTFNVIKDYILKEGNWLNEKNSKVVISGKIEMLPKELLDTLKDLELKTKENNGIV 142
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCS----HDVD--SSLIAKYLDTSDVPDPDLI 185
L I YS E+ A K ++ ++ + + D+ ++ ++P P+++
Sbjct: 143 LNICCAYSWTAELEMASKKYLENYKNVNSNNINQIQDITLSDEKFKSFIYNPEIPFPNIL 202
Query: 186 IRTGGEKRLSDFLLWQVAYSE-FVFIPEYWPDFSRELFFHALNQY 229
IRT GE RLSDFL++QV ++ F+ WP + + Y
Sbjct: 203 IRTSGETRLSDFLIYQVCHNTRIYFVKTLWPQINPLNILIVILHY 247
>gi|22213589|gb|AAM92882.1| cis-prenyltransferase 3 [Hevea brasiliensis]
gi|22213597|gb|AAM92886.1| cis-prenyltransferase 7 [Hevea brasiliensis]
gi|193876217|gb|ACF24746.1| cis-prenyl transferase II [Hevea brasiliensis]
gi|193876219|gb|ACF24747.1| cis-prenyl transferase II [Hevea brasiliensis]
Length = 296
Score = 185 bits (469), Expect = 5e-45, Method: Composition-based stats.
Identities = 63/263 (23%), Positives = 112/263 (42%), Gaps = 34/263 (12%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + P H+ IMDGN R+A + G++ G + E+G++ +TI
Sbjct: 23 LYSILTQGPIPTHLAFIMDGNRRFAKKHKMKEAEGYKAGYLALLRTLTYCYELGVRYVTI 82
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNN---IKVRVIGNRLSLDDDILCVL 117
+AFSI+N+RR E+ ++ L+ +++ N + VR++GN LD+ I
Sbjct: 83 YAFSIDNFRRQPREVQCVMNLMMEKIEEIIVEESIMNAYDVGVRIVGNLNLLDEPIRIAA 142
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD------------- 164
++ T N+ L IA YSS DEI A++ +D + + ++
Sbjct: 143 EKIMRATANNSRFVLLIAVAYSSTDEIVHAVEESSKDKLNSNEVCNNGIEAEQEFKEANG 202
Query: 165 ----------------VDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFV 208
++ + + K T P PD++IRT G RLS++LLWQ +
Sbjct: 203 TGNSVIPVQKTESYSGINLADLEKN--TYVNPHPDVLIRTSGLSRLSNYLLWQTSNCILY 260
Query: 209 FIPEYWPDFSRELFFHALNQYNL 231
WP+ + +
Sbjct: 261 SPFALWPEIGLRHLVWTVMNFQR 283
>gi|255598448|ref|XP_002537011.1| undecaprenyl pyrophosphate synthetase, putative [Ricinus communis]
gi|223517818|gb|EEF25371.1| undecaprenyl pyrophosphate synthetase, putative [Ricinus communis]
Length = 165
Score = 185 bits (469), Expect = 6e-45, Method: Composition-based stats.
Identities = 86/158 (54%), Positives = 116/158 (73%)
Query: 85 FLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEI 144
F+++ L K N++VRVIG+R+ L DDI +L+EAE TR NT L L IAFNY +RDEI
Sbjct: 2 FIRRDLAELHKENVRVRVIGDRVGLKDDIRALLEEAEQTTRDNTALTLIIAFNYGARDEI 61
Query: 145 SRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY 204
+RA ++ +D+ G + + + I+ LDT+ +PDPDLIIRT GE+RLS+FLLWQ AY
Sbjct: 62 ARAAASLARDVAEGRLDASAITPDAISARLDTAGIPDPDLIIRTSGEERLSNFLLWQAAY 121
Query: 205 SEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
SEF+FIP+YWPDF+R+ A++QY RDRRFGGLS +
Sbjct: 122 SEFLFIPDYWPDFNRQTLVAAIDQYMTRDRRFGGLSTQ 159
>gi|323347184|gb|EGA81459.1| Srt1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 342
Score = 185 bits (469), Expect = 6e-45, Method: Composition-based stats.
Identities = 68/249 (27%), Positives = 120/249 (48%), Gaps = 18/249 (7%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P+H+ IMDGN R+A +R LP GH G ++ +G+K ++
Sbjct: 57 LIKALRVGPVPEHVSFIMDGNRRYAKSRRLPVKKGHEAGGLTLLTLLYICKRLGVKCVSA 116
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKK-----NNIKVRVIGNRLSLDDDILC 115
+AFSI N+ RP E+ L+ L L + K K+R++G++ L ++
Sbjct: 117 YAFSIENFNRPKEEVDTLMNLFTVKLDEFAKRAKDYKDPLYGSKIRIVGDQSLLSPEMRK 176
Query: 116 VLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD 175
+K+ E+ T+ LFI F Y+SR+++ I++ +D S ++ +
Sbjct: 177 KIKKVEEITQDGDDFTLFICFPYTSRNDMLHTIRDSVEDH--LENKSPRINIRKFTNKMY 234
Query: 176 TS-DVPDPDLIIRTGGEKRLSDFLLWQVA-YSEFVFIPEYWPDFS---------RELFFH 224
+L+IRT G +RLSD++LWQV + F WP+FS + FF
Sbjct: 235 MGFHSNKCELLIRTSGHRRLSDYMLWQVHENATIEFSDTLWPNFSFFAMYLMILKWSFFS 294
Query: 225 ALNQYNLRD 233
+ +YN ++
Sbjct: 295 TIQKYNEKN 303
>gi|294852497|ref|ZP_06793170.1| di-trans,poly-cis-decaprenylcistransferase [Brucella sp. NVSL
07-0026]
gi|294821086|gb|EFG38085.1| di-trans,poly-cis-decaprenylcistransferase [Brucella sp. NVSL
07-0026]
Length = 180
Score = 184 bits (468), Expect = 8e-45, Method: Composition-based stats.
Identities = 77/162 (47%), Positives = 109/162 (67%)
Query: 82 IKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSR 141
+K F+++ L +NN++V +IG R L +I +L EAE T NTGLNL IAFNY SR
Sbjct: 1 MKLFIRRDLAELHRNNVRVNIIGERAELAANIRALLNEAESLTHRNTGLNLVIAFNYGSR 60
Query: 142 DEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQ 201
DEI RA++++ +D+ +G + + + L++ LDT+ +PDPDLIIRT GE RLS+FLLWQ
Sbjct: 61 DEIVRAVRSLARDVAAGLLDPSSISAELVSANLDTAGIPDPDLIIRTSGEMRLSNFLLWQ 120
Query: 202 VAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
AYSEF+F+P +WPDF A + R+RRFGG+ +
Sbjct: 121 AAYSEFLFLPCHWPDFRPADLDAAYETFRQRERRFGGVEPRA 162
>gi|255522543|ref|ZP_05389780.1| undecaprenyl diphosphate synthase [Listeria monocytogenes FSL
J1-175]
Length = 152
Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 63/150 (42%), Positives = 90/150 (60%)
Query: 90 FYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIK 149
L + N++V V+G R +L + + +++A T TGL L A NY R EI A K
Sbjct: 3 VPELIEENVRVNVMGYRENLPNHTMRAVEKAIADTAHCTGLTLNFALNYGGRSEIITAAK 62
Query: 150 NIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVF 209
+++E + D+ + +L +S + DPDL+IRT GE RLS+F+LWQ+AYSEF F
Sbjct: 63 EAMKELELEGKSADDLTEEKLNDHLMSSGLGDPDLLIRTSGELRLSNFMLWQLAYSEFYF 122
Query: 210 IPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+WPDFS+E F A+ +Y R RRFGGL
Sbjct: 123 TDTHWPDFSKEDFLQAIIEYQNRSRRFGGL 152
>gi|226327049|ref|ZP_03802567.1| hypothetical protein PROPEN_00910 [Proteus penneri ATCC 35198]
gi|225204267|gb|EEG86621.1| hypothetical protein PROPEN_00910 [Proteus penneri ATCC 35198]
Length = 169
Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 61/161 (37%), Positives = 97/161 (60%)
Query: 82 IKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSR 141
+ L SL K+N+K+ VIG+ + +K + T NTGLNL IA NY R
Sbjct: 1 MFFALDNEVKSLHKHNVKLTVIGDISRFSRRLQDRIKSSVALTANNTGLNLNIAANYGGR 60
Query: 142 DEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQ 201
+I++++K + + G + D++ + I+ +L + PD DL+IRTGGE R+S+FL+WQ
Sbjct: 61 WDITQSVKQLATSLAKGEISLEDINENAISSHLCLHNQPDVDLVIRTGGEHRISNFLIWQ 120
Query: 202 VAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+AY+E F WPDF ++F +AL+ + R+RRFGG + +
Sbjct: 121 IAYAELYFTQVLWPDFDEQVFQNALDAFAKRERRFGGTTSE 161
>gi|145628149|ref|ZP_01783950.1| hypothetical protein CGSHi22121_03890 [Haemophilus influenzae
22.1-21]
gi|144979924|gb|EDJ89583.1| hypothetical protein CGSHi22121_03890 [Haemophilus influenzae
22.1-21]
Length = 173
Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 60/160 (37%), Positives = 91/160 (56%)
Query: 81 LIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSS 140
+ L+ L KNNI +++IG+ + + +K+AE+ T NT L L IA NY
Sbjct: 14 AFYASLRSRSKKLHKNNICLKIIGDVSRFSETLQEKIKKAENLTEKNTALTLNIAANYGG 73
Query: 141 RDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLW 200
+I +A K I + ++ + D+++S +L T + P DL+IRT GE+R+S+FLLW
Sbjct: 74 CWDIVQATKQIAEKVKKEEMSVSDINNSTFQHHLATQNAPPVDLLIRTSGEQRISNFLLW 133
Query: 201 QVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
Q+AY+E F WPDF++ F A+ Y R RRFGG
Sbjct: 134 QIAYAELYFSDVLWPDFNQLEFNRAIASYQQRHRRFGGTE 173
>gi|326792335|ref|YP_004310156.1| Di-trans,poly-cis-decaprenylcistransferase [Clostridium lentocellum
DSM 5427]
gi|326543099|gb|ADZ84958.1| Di-trans,poly-cis-decaprenylcistransferase [Clostridium lentocellum
DSM 5427]
Length = 214
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 65/232 (28%), Positives = 102/232 (43%), Gaps = 21/232 (9%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ II DGN RWA GL + G+ G+ E + A GI+ LT + F+ +N
Sbjct: 2 RIPKHVAIIPDGNRRWANESGLEKHQGYEHGLNPGVEALRLAKTYGIEELTYYGFTTDNC 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRL--SLDDDILCVLKEAEDQTRL 126
+RP ++ V +K ++++ V+GN ++L KE
Sbjct: 62 KRPPVQVKAFVDACIDA----INLIKNEDVRLLVVGNTQSPMFPSELLPYTKERVAFGTG 117
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
T +N + NY ++ + + + I L + D+ DLII
Sbjct: 118 TTKVNFLV--NYGWEWDLGH-------------MHTDTTNRHTIMDCLCSKDISRIDLII 162
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG RLS L Q Y++F + E WP+FS++ F A+ YN +D GG
Sbjct: 163 RWGGRNRLSGLLPVQSVYADFYTLDEMWPEFSKDQFSRAIEWYNKQDVTLGG 214
>gi|167534288|ref|XP_001748822.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772784|gb|EDQ86432.1| predicted protein [Monosiga brevicollis MX1]
Length = 379
Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats.
Identities = 59/233 (25%), Positives = 98/233 (42%), Gaps = 34/233 (14%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
V ++ + P H+ IMDGN R+A R + R AGH G + E + ++ I+ ++++
Sbjct: 25 VQTLRAGKLPKHVAFIMDGNRRFARQRHIARIAGHSAGFDKLKETLQWCLDLDIRIVSVY 84
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLK 118
AFSI N+ R E+ L++L + L ++ + VR++GN L + + VL
Sbjct: 85 AFSIENFNRSKEEVDALMQLALEKFETLLDESEVLHQHQVSVRIVGNMDLLPEALQRVLG 144
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
+ +TR T L + F Y++RD+I+ A I +D I +L
Sbjct: 145 KVVYETRAYTKAILNVCFAYTARDDITTAANRILTA----------LDEGRIQSWL---- 190
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
+S +LL Y F WPDF + Y
Sbjct: 191 ---------------ISVYLLEY--YHPVWFTKVLWPDFGFYDMLECIVAYQR 226
>gi|307711002|ref|ZP_07647424.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus mitis
SK321]
gi|307616964|gb|EFN96142.1| di-trans,poly-cis-decaprenylcistransferase [Streptococcus mitis
SK321]
Length = 165
Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats.
Identities = 71/165 (43%), Positives = 89/165 (53%), Gaps = 4/165 (2%)
Query: 79 VKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNY 138
+ L F L NN+K+++IG L L +AE+ T+ NTGL L A NY
Sbjct: 1 MNLPVEFYDNYVPELHANNVKIQMIGETDRLPKQTFEALTKAEELTKNNTGLILNFALNY 60
Query: 139 SSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLIIRTGGEKRL 194
R EI++A+K I QD+ + D+ LI YL T +P DPDLIIRT GE RL
Sbjct: 61 GGRAEITQALKLISQDVLDAKINPGDITEELIGNYLFTQHLPKDLRDPDLIIRTSGELRL 120
Query: 195 SDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
S+FL WQ AYSE F WPDF A+ YN R RRFGG+
Sbjct: 121 SNFLPWQGAYSELYFTDTLWPDFDEAALQEAILAYNRRHRRFGGV 165
>gi|168186443|ref|ZP_02621078.1| undecaprenyl pyrophosphate synthetase [Clostridium botulinum C str.
Eklund]
gi|169295497|gb|EDS77630.1| undecaprenyl pyrophosphate synthetase [Clostridium botulinum C str.
Eklund]
Length = 214
Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats.
Identities = 67/232 (28%), Positives = 107/232 (46%), Gaps = 21/232 (9%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P+HIGII DGN RWA GL + G+ G+ + ++G+K +T + F+ +N
Sbjct: 2 RIPNHIGIIPDGNRRWAVENGLTKEKGYNSGLNPGLILFHLCKKIGVKEITYYGFTTDNT 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRL--SLDDDILCVLKEAEDQTRL 126
+RP + K L+K + + V+G+ ++L K +T
Sbjct: 62 KRPKIQRQAFSKACVDA----VNLLRKEDADLLVVGDYNSPMFPKELLPFTKR---KTIG 114
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N G+ + NY ++ N + I +L ++D+ DLII
Sbjct: 115 NGGIKVNFLVNYGWEWDLGNLKNNTST------------NRDTITNHLRSNDISRVDLII 162
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q YS+F + +YWP+F++ F+ AL YN +D GG
Sbjct: 163 RWGGRRRLSGFLPVQSIYSDFYVVDDYWPNFTKNHFYDALKWYNTQDITLGG 214
>gi|323336297|gb|EGA77568.1| Srt1p [Saccharomyces cerevisiae Vin13]
Length = 343
Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats.
Identities = 68/249 (27%), Positives = 120/249 (48%), Gaps = 18/249 (7%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P+H+ IMDGN R+A +R LP GH G ++ +G+K ++
Sbjct: 57 LIKALRVGPVPEHVSFIMDGNRRYAKSRRLPVKKGHEAGGLTLLTLLYICKRLGVKCVSA 116
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKK-----NNIKVRVIGNRLSLDDDILC 115
+AFSI N+ RP E+ L+ L L + K K+R++G++ L ++
Sbjct: 117 YAFSIENFNRPKEEVDTLMNLFTVKLDEFAKRAKDYKDPLYGSKIRIVGDQSLLSPEMKK 176
Query: 116 VLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD 175
+K+ E+ T+ LFI F Y+SR+++ I++ +D S ++ +
Sbjct: 177 KIKKVEEITQDGDDFTLFICFPYTSRNDMLHTIRDSVEDH--LENKSPRINIRKFTNKMY 234
Query: 176 TS-DVPDPDLIIRTGGEKRLSDFLLWQVA-YSEFVFIPEYWPDFS---------RELFFH 224
+L+IRT G +RLSD++LWQV + F WP+FS + FF
Sbjct: 235 MGFHSNKCELLIRTSGHRRLSDYMLWQVHENATIEFSDTLWPNFSFFAMYLMILKWSFFS 294
Query: 225 ALNQYNLRD 233
+ +YN ++
Sbjct: 295 TIQKYNEKN 303
>gi|304316706|ref|YP_003851851.1| Di-trans-poly-cis-decaprenylcistransferase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778208|gb|ADL68767.1| Di-trans-poly-cis-decaprenylcistransferase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 216
Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats.
Identities = 70/232 (30%), Positives = 109/232 (46%), Gaps = 20/232 (8%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P+HIGII DGN RWA + +P+ AG+ G+E + E+G+K LT + F+ +N
Sbjct: 3 RIPNHIGIIPDGNRRWAQNKNMPKEAGYSYGLEPGIALYRLCRELGVKELTFYGFTQDNT 62
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRL--SLDDDILCVLKEAEDQTRL 126
+RP + K L+K + + VIGN ++L L +T
Sbjct: 63 KRPSVQTEAFKKACIDA----VKMLEKEDADLLVIGNYNSPMFPKELLPYLSR---KTIG 115
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
+ + NY + +++ A+K + + I + + D+ DLII
Sbjct: 116 EGKMKVNFLVNYGWQWDLNSALKALSNGEKRD-----------ILDLISSKDISRIDLII 164
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q YS+F I +YWPDF + + AL Y+ +D GG
Sbjct: 165 RWGGRRRLSGFLPVQSIYSDFYVIDDYWPDFKPQHLYEALEWYSKQDITLGG 216
>gi|302024533|ref|ZP_07249744.1| undecaprenyl pyrophosphate synthase [Streptococcus suis 05HAS68]
Length = 165
Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats.
Identities = 75/165 (45%), Positives = 95/165 (57%), Gaps = 4/165 (2%)
Query: 79 VKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNY 138
+ L F K L NN+K+++IG+ L L L +AE +T+ NTGL L A NY
Sbjct: 1 MNLPVEFYDKYVPELHANNVKIQMIGDHSKLPVPTLNALYKAEQKTKSNTGLILNFALNY 60
Query: 139 SSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP----DPDLIIRTGGEKRL 194
RDE++RA+K I QD+ D+D LIA YL T + DPDL+IRT GE RL
Sbjct: 61 GGRDEVTRAVKAIAQDVLDAKFNPGDIDEKLIADYLYTGTLSPTLRDPDLVIRTSGELRL 120
Query: 195 SDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
S+FL WQ AYSE F WPDF E A+ +YN R RRFGG+
Sbjct: 121 SNFLPWQTAYSELYFTDIAWPDFDGEALKLAIKEYNRRHRRFGGV 165
>gi|303288111|ref|XP_003063344.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455176|gb|EEH52480.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 222
Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats.
Identities = 67/230 (29%), Positives = 110/230 (47%), Gaps = 19/230 (8%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
P+H+ I+MDGN R+AA+R LP GH G + +++ +G++ L+++AFS N
Sbjct: 6 GPIPEHVAIVMDGNRRFAASRSLPTGVGHSAGADKLVDVMRWCHLLGVRVLSVYAFSSEN 65
Query: 68 WRRPVSEISELVKLIKSFLKKG--FYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
+ RP E+ L L ++ ++ + ++VRV+G+ SL + + T
Sbjct: 66 FARPRDELDALFSLAETRFDDLATHPAVTERRVRVRVLGDLASLPKGVRDAAERVTAATA 125
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
+ G L + F Y+ R ++ A + G C+ D S+ +A DL+
Sbjct: 126 AHDGPRLDVYFAYTGRGDVVGAT---LERCMRGGACAEDGTSTTVA----------VDLL 172
Query: 186 IRTGGEKRLSDFLLWQVA----YSEFVFIPEYWPDFSRELFFHALNQYNL 231
+RT GE RLSDF LW + ++ F WPDFS HA+ Y
Sbjct: 173 VRTSGETRLSDFTLWGIRRVLKHAVLCFADVLWPDFSFADMCHAVWTYQK 222
>gi|121729974|ref|ZP_01682392.1| flagellar protein FliG [Vibrio cholerae V52]
gi|121628278|gb|EAX60790.1| flagellar protein FliG [Vibrio cholerae V52]
Length = 167
Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats.
Identities = 55/160 (34%), Positives = 95/160 (59%)
Query: 83 KSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRD 142
+ L L KNN+++RVIG++ + + + +AE T NTG+ + IA NY +
Sbjct: 1 MTVLSTEIKKLHKNNLRLRVIGDKSRFSERLQTKIAQAEQLTASNTGMVVNIAANYGGQW 60
Query: 143 EISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQV 202
+I +A + + + + G + D+D ++ ++L +D+PD DL+IRT GE R+S+F+LWQ+
Sbjct: 61 DILQATQALAEKVTQGELQPSDIDEAVFKQHLTMADLPDVDLLIRTSGECRISNFMLWQL 120
Query: 203 AYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
AY+E F P +WP+F A+ + R+RRFG ++
Sbjct: 121 AYAEMYFTPVFWPEFDENCLIEAVTWFVNRERRFGCTGEQ 160
>gi|332016624|gb|EGI57495.1| Dehydrodolichyl diphosphate synthase [Acromyrmex echinatior]
Length = 239
Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats.
Identities = 65/214 (30%), Positives = 94/214 (43%), Gaps = 24/214 (11%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGN R+A + LP G+ KG + E++ + I TI+AFSI N++R E+
Sbjct: 1 MDGNRRYAKKQNLPIAEGYSKGYDKMVELIYLCRTLDIVEFTIYAFSIGNFKRNKEEVDS 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L+ L + K A +F
Sbjct: 61 LMNLARQKFKDLLEDKHNM------------FRPAFRKCAISA------------IASFC 96
Query: 138 YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDF 197
+ RDEI+ AIK+I Q ++ + D++ LI L T P+PD++IRT GE RLSDF
Sbjct: 97 HPPRDEITHAIKDIIQGVKDNDILLEDINEDLITNCLYTYKSPNPDILIRTSGEIRLSDF 156
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNL 231
LLWQ++ + FI WPD S + Y
Sbjct: 157 LLWQISNTCIYFIKVLWPDISSWNLLSVIFYYQR 190
>gi|302392591|ref|YP_003828411.1| Di-trans-poly-cis-decaprenylcistransferase [Acetohalobium
arabaticum DSM 5501]
gi|302204668|gb|ADL13346.1| Di-trans-poly-cis-decaprenylcistransferase [Acetohalobium
arabaticum DSM 5501]
Length = 215
Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats.
Identities = 66/232 (28%), Positives = 110/232 (47%), Gaps = 20/232 (8%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
PDHIGII DGN RWA ++GL + G+ G+ +++ EVG+ +T + F+ +N
Sbjct: 2 RVPDHIGIIPDGNRRWAESKGLSKEQGYTHGLSPGVKLLRLCKEVGVNEVTYYGFTTDNT 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNR--LSLDDDILCVLKEAEDQTRL 126
RP +I+ + L + + VIG+R D++ +E +
Sbjct: 62 ERPPKQITAFRQACVDA----VEMLANEDASLLVIGDRQADEFPDELESYTEERQPF--G 115
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N + + NY + ++ + + +V + L+++ V DL+I
Sbjct: 116 NNEIKVNFLVNYGWKWDL------------NSLSQADEVSRRKLKNQLNSNQVSQVDLVI 163
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R G +RLS FL Q Y++F + EYWPDF E F+ AL Y+ +D +GG
Sbjct: 164 RWGNRRRLSGFLPVQSVYADFYVVDEYWPDFEPEQFYEALEWYDKQDITYGG 215
>gi|218197660|gb|EEC80087.1| hypothetical protein OsI_21824 [Oryza sativa Indica Group]
Length = 289
Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats.
Identities = 56/207 (27%), Positives = 100/207 (48%), Gaps = 14/207 (6%)
Query: 39 GIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKK 95
G+ + E+G+K +T++AFSI+N++R +E+ L++L++ + + + + K
Sbjct: 67 GLPALIASLLYCYEMGVKYITVYAFSIDNFKRDPTEVKSLMELMEEKINELLENRNVINK 126
Query: 96 NNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI 155
N K+ GN L + ++ T NTGL + Y+S EI A+ + +
Sbjct: 127 VNCKINFWGNLDMLSKSVRVAAEKLMATTAENTGLVFSVCMPYNSTSEIVNAVNKVCAER 186
Query: 156 ESGSVCSH-----------DVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY 204
D+ + + +++ ++ PDPD++IRT GE RLS+FLLWQ +
Sbjct: 187 RDILQREDADSVANNGVYSDISVADLDRHMYSAGCPDPDIVIRTSGETRLSNFLLWQTTF 246
Query: 205 SEFVFIPEYWPDFSRELFFHALNQYNL 231
S WP+FS + A+ QY
Sbjct: 247 SHLQNPDPLWPEFSFKHLVWAILQYQR 273
>gi|296132449|ref|YP_003639696.1| Di-trans-poly-cis-decaprenylcistransferase [Thermincola sp. JR]
gi|296031027|gb|ADG81795.1| Di-trans-poly-cis-decaprenylcistransferase [Thermincola potens JR]
Length = 225
Score = 181 bits (460), Expect = 6e-44, Method: Composition-based stats.
Identities = 67/232 (28%), Positives = 109/232 (46%), Gaps = 16/232 (6%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HIG+I DGN RWA GLP+ AG+ GI + A+E+GI+ +T + F+ +N
Sbjct: 8 RLPRHIGVIPDGNRRWAEKNGLPKEAGYSWGIAPGFYLYELASELGIEEMTFYGFTHDNT 67
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS--LDDDILCVLKEAEDQTRL 126
+RP + K + K + V+GN S ++L K+ + +
Sbjct: 68 KRPTVQKRAFQKACVDAVFKLLEKDAA----LLVVGNTESPAFPRELLPFTKKRVNIGKG 123
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
G+ + NY ++ +K + + + L ++D+ DL+I
Sbjct: 124 --GMRVNFLVNYGWHWDLYHGMKAALPRKSAAKH--------VFHQSLASADISRIDLVI 173
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q Y++F + + WPDF E F++AL Y ++D GG
Sbjct: 174 RWGGRRRLSGFLPVQTIYADFFIVDDLWPDFKPEHFYNALRWYEVQDITLGG 225
>gi|134299309|ref|YP_001112805.1| di-trans,poly-cis-decaprenylcistransferase [Desulfotomaculum
reducens MI-1]
gi|134052009|gb|ABO49980.1| Di-trans,poly-cis-decaprenylcistransferase [Desulfotomaculum
reducens MI-1]
Length = 219
Score = 181 bits (460), Expect = 6e-44, Method: Composition-based stats.
Identities = 66/232 (28%), Positives = 106/232 (45%), Gaps = 21/232 (9%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HIGII DGN RWA +GL + AG+ GI ++ E+GI +T + F+++N
Sbjct: 7 RLPKHIGIIPDGNRRWAQNQGLAKEAGYDHGITPGFDLYQICLELGIPEITFYGFTVDNT 66
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRL--SLDDDILCVLKEAEDQTRL 126
+RP + K L + + VIGN ++L
Sbjct: 67 KRPPVQKKAFQKACVDA----VNILANRDASLLVIGNHESAQFPKELLPYTTRKIF---G 119
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
+ + + NY + ++++A ++ +DSS + + + D+ DLII
Sbjct: 120 SNRIKINFLVNYGWKWDLNQA------------FNNNSMDSSYFHEKIASKDISRIDLII 167
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q Y++F + + WP+F E F+ AL Y +D GG
Sbjct: 168 RWGGRRRLSGFLPVQSIYADFYVVEDLWPNFRSEQFYEALMWYQDQDITLGG 219
>gi|331270100|ref|YP_004396592.1| Di-trans-poly-cis-decaprenylcistransferase [Clostridium botulinum
BKT015925]
gi|329126650|gb|AEB76595.1| Di-trans-poly-cis-decaprenylcistransferase [Clostridium botulinum
BKT015925]
Length = 214
Score = 181 bits (459), Expect = 7e-44, Method: Composition-based stats.
Identities = 70/232 (30%), Positives = 110/232 (47%), Gaps = 21/232 (9%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P+HIGII DGN RWA GL + G+ G+ + ++GIK +T + F+ +N
Sbjct: 2 RIPNHIGIIPDGNRRWAINNGLTKEKGYDSGLNPGLILFRLCKKIGIKEITYYGFTTDNT 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRL--SLDDDILCVLKEAEDQTRL 126
+RP + K L K + + V+GN ++L K +T
Sbjct: 62 KRPKIQRLAFSKACVDA----VNLLSKEDADLLVVGNYDSPMFPKELLPFTKR---KTFG 114
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
G+ + NY ++S +N + + IA L ++D+ DLII
Sbjct: 115 KGGIKVNFLVNYGWEWDLSNLKENTSS------------NRNTIANTLKSNDISRVDLII 162
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q YS+F + +YWP+F+++ F++AL YN +D GG
Sbjct: 163 RWGGRRRLSGFLPVQSIYSDFYVVDDYWPNFNKDHFYNALKWYNTQDITLGG 214
>gi|56292027|emb|CAI29179.1| cis-isopentenyltransferase [Trypanosoma brucei brucei]
Length = 419
Score = 181 bits (459), Expect = 8e-44, Method: Composition-based stats.
Identities = 73/281 (25%), Positives = 124/281 (44%), Gaps = 54/281 (19%)
Query: 12 DHIGIIMDGNGRWAAARGLP--------------------------------------RC 33
H+ +IMDGN R+ + +
Sbjct: 139 KHLAVIMDGNRRYGQRHSVETVCVKELEDVCEFIFNEDMPLFGVETNFKRLAFLLKRTKL 198
Query: 34 AGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSL 93
GHR G E E V + I LT++AFS NW RP E+ L+ L + ++ +
Sbjct: 199 DGHRVGGEKLLEFVKDCIDFNISMLTVYAFSTENWSRPALEVKVLMTLFYCYFERMRQTA 258
Query: 94 KKNNIKVRVIGNR-LSLDDDILCVLKEAEDQTRLN--TGLNLFIAFNYSSRDEISRAIKN 150
+K I +R I + I ++ + E++TR + + + + +YS RDEI A
Sbjct: 259 RKQGIFIRFISPAFEMIPSRIRRIMVDIEEETRRHVPRRIVVNVCVSYSGRDEIINACNG 318
Query: 151 IFQDI-ESGSVCSHDVDSSLI------------AKYLDTSDVPDPDLIIRTGGEKRLSDF 197
+ Q E + + D+ S ++ A L +P +++RT GE+RLS+F
Sbjct: 319 LLQKRSEYSPISTGDLMSQMLRSVTQADHEEEDASVLFDGGGAEPQILLRTSGEQRLSNF 378
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
LL++ AY+EF+F+ + WP+ +RE L ++ RD+R+G
Sbjct: 379 LLFECAYTEFLFVDKTWPEINREDLVKLLQDHDKRDKRYGK 419
>gi|150389054|ref|YP_001319103.1| di-trans-poly-cis-decaprenylcistransferase [Alkaliphilus
metalliredigens QYMF]
gi|149948916|gb|ABR47444.1| Di-trans-poly-cis-decaprenylcistransferase [Alkaliphilus
metalliredigens QYMF]
Length = 219
Score = 180 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 71/233 (30%), Positives = 108/233 (46%), Gaps = 17/233 (7%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+ P HIG+I DGN RWAA +GL + AG+ KG+ E+ E+G+K LT + F+ +N
Sbjct: 2 NRIPSHIGVIPDGNRRWAAGQGLAKEAGYEKGLNPGLELYGLCKELGVKELTFYGFTQDN 61
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS--LDDDILCVLKEAEDQTR 125
+RP + K L K + ++ VIGN S ++ K +
Sbjct: 62 TKRPSIQREAFQKSCVDA----VEMLSKEDAELLVIGNDSSNLFPKQLIPYRKRTKF--- 114
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
L + NY + ++S + + S + I + ++D+ DLI
Sbjct: 115 GEGRLKVNFLVNYGWQWDLSHGLSQEVKKNSSSN--------ENIMTNIASADISRVDLI 166
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
IR GG +RLS FL Q YS+ + YWPDF + + AL YN +D GG
Sbjct: 167 IRWGGRRRLSGFLPVQSIYSDLYVVDAYWPDFKPQHLYDALEWYNQQDVTLGG 219
>gi|145520405|ref|XP_001446058.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124413535|emb|CAK78661.1| unnamed protein product [Paramecium tetraurelia]
Length = 238
Score = 180 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 67/232 (28%), Positives = 125/232 (53%), Gaps = 13/232 (5%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P+H+G+IMDGN R+A R + GH +G + F ++ + ++GIK +++FAFS
Sbjct: 12 LKLGNIPNHVGVIMDGNRRYAKQRRIEPTEGHIQGYQSFLNLLEWSQKLGIKEISVFAFS 71
Query: 65 INNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDD-DILCVLKEA 120
I N+ R E+ L++L+K L+ + +N ++V+ G+ L D ++ L E
Sbjct: 72 IENYNRQRDEVQFLMELMKQKMHHLQHDLNFIDQNQVRVKCCGDLDILQDQELKSKLLEL 131
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E + + L I F+Y+ +E+ +AI+++ + + L + + T+
Sbjct: 132 ETYSSKYSQYKLNICFSYNFTNELEKAIQSM-----PKGLTKQEFFQQLSSHLMVTNS-- 184
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFV-FIPEYWPDFSRELFFHALNQYNL 231
PD+++RT GE RLS+FLL+Q+ + + FI + WP+ S F + + Y
Sbjct: 185 -PDILLRTSGETRLSNFLLYQIRENTVIHFIDKKWPELSFLDFCNMILFYRK 235
>gi|72391834|ref|XP_846211.1| cis-prenyltransferase-like protein [Trypanosoma brucei TREU927]
gi|62358365|gb|AAX78829.1| cis-prenyltransferase-like protein [Trypanosoma brucei]
gi|70802747|gb|AAZ12652.1| cis-prenyltransferase-like protein [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 419
Score = 180 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 73/281 (25%), Positives = 124/281 (44%), Gaps = 54/281 (19%)
Query: 12 DHIGIIMDGNGRWAAARGLP--------------------------------------RC 33
H+ +IMDGN R+ + +
Sbjct: 139 KHLAVIMDGNRRYGQRHSVETVCVKELEDVCEFIFNEDMPLFGVEPIFKRLAFLLKRTKL 198
Query: 34 AGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSL 93
GHR G E E V + I LT++AFS NW RP E+ L+ L + ++ +
Sbjct: 199 DGHRVGGEKLLEFVKDCIDFNISMLTVYAFSTENWSRPALEVKVLMTLFYCYFERMRQTA 258
Query: 94 KKNNIKVRVIGNR-LSLDDDILCVLKEAEDQTRLN--TGLNLFIAFNYSSRDEISRAIKN 150
+K I +R I + I ++ + E++TR + + + + +YS RDEI A
Sbjct: 259 RKQGIFIRFISPAFEMIPSRIRRIMVDIEEETRRHVPRRIVVNVCVSYSGRDEIINACNG 318
Query: 151 IFQDI-ESGSVCSHDVDSSLI------------AKYLDTSDVPDPDLIIRTGGEKRLSDF 197
+ Q E + + D+ S ++ A L +P +++RT GE+RLS+F
Sbjct: 319 LLQKRSEYSPISTGDLMSQMLRSVTQADHEEEDASVLFDGGGAEPQILLRTSGEQRLSNF 378
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
LL++ AY+EF+F+ + WP+ +RE L ++ RD+R+G
Sbjct: 379 LLFECAYTEFLFVDKTWPEINREDLVKLLQDHDKRDKRYGK 419
>gi|15894711|ref|NP_348060.1| undecaprenyl pyrophosphate synthase related enzyme [Clostridium
acetobutylicum ATCC 824]
gi|15024373|gb|AAK79400.1|AE007654_9 Undecaprenyl pyrophosphate synthase related enzyme [Clostridium
acetobutylicum ATCC 824]
gi|325508849|gb|ADZ20485.1| Undecaprenyl pyrophosphate synthase related enzyme [Clostridium
acetobutylicum EA 2018]
Length = 213
Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats.
Identities = 71/232 (30%), Positives = 114/232 (49%), Gaps = 22/232 (9%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P+HIGII DGN RWA ++G+ + G+ GI +++ +VGIK +T + F+++N
Sbjct: 2 RLPNHIGIIPDGNRRWAVSKGMSKEEGYNPGISPGLQLLRLCKQVGIKEVTYYGFTVDNT 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNR--LSLDDDILCVLKEAEDQTRL 126
+RP ++ K + K N + V+GN ++L K ++
Sbjct: 62 KRPKNQRLAFTDACI----KAVDVISKENASLLVVGNTESDMFPKELLPYTKR---KSFG 114
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
+ G+ + NY ++ I + +S ++SS I++ DLII
Sbjct: 115 DGGIKVNFLVNYGWEWDL----NKIKEGEKSSKKVVSYINSSYISR---------VDLII 161
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q YS+F + +YWPDF E FF AL+ Y+ +D GG
Sbjct: 162 RWGGRRRLSGFLPVQSIYSDFYVVDDYWPDFKPEHFFDALDWYSKQDITLGG 213
>gi|218679111|ref|ZP_03527008.1| undecaprenyl diphosphate synthase [Rhizobium etli CIAT 894]
Length = 157
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 81/147 (55%), Positives = 109/147 (74%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P+H+ IIMDGNGRWA RGLPR GHRKG+E E V AA GIK LT+FAFS NWR
Sbjct: 9 VPEHVAIIMDGNGRWAKQRGLPRTMGHRKGVEAVRETVRAAGAAGIKYLTLFAFSSENWR 68
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP +E+S+L+ L+K+F+++ L + N++++VIG+R SL DIL +L EAE+ T+ NT
Sbjct: 69 RPEAEVSDLLGLLKAFIRRDLAELHRQNVRIKVIGDRHSLRSDILGLLLEAEETTKDNTA 128
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIE 156
L L IAFNY SRDEISRA+ ++ +D++
Sbjct: 129 LTLVIAFNYGSRDEISRAVVSLARDVK 155
>gi|114554923|ref|XP_001143997.1| PREDICTED: hypothetical protein isoform 9 [Pan troglodytes]
Length = 263
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 64/208 (30%), Positives = 98/208 (47%), Gaps = 40/208 (19%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IMDGN R+A + R GH +G E + +GI +T++AFS
Sbjct: 20 IKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSF---LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R SE+ L+ L + L + L+K+ + +RV+G+ L D+ ++ +A
Sbjct: 80 IENFKRSKSEVDGLMDLARQKFSRLMEEQEKLQKHGVCIRVLGDLHLLPLDLQELIAQAV 139
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T+ +D+ SL+ K L T+ P
Sbjct: 140 QATKNYN----------------------------------NDISESLLDKCLYTNRSPH 165
Query: 182 PDLIIRTGGEKRLSDFLLWQVA---YSE 206
PD++IRT GE RLSDFLLWQ A Y+E
Sbjct: 166 PDILIRTSGEVRLSDFLLWQKARDMYAE 193
>gi|289675262|ref|ZP_06496152.1| undecaprenyl pyrophosphate synthetase [Pseudomonas syringae pv.
syringae FF5]
Length = 174
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 61/166 (36%), Positives = 100/166 (60%)
Query: 77 ELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAF 136
L++L + L++ L +N I +R+IG+R ++ ++EAE +T N+ L IA
Sbjct: 2 ALMELFFTALRRETKRLNENEISLRIIGDRSRFHPELQAAMREAEVRTSGNSRFVLQIAA 61
Query: 137 NYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSD 196
NY + +I++A + + +++++G + D+ L+ L T D+P PDL IRTGGE R+S+
Sbjct: 62 NYGGQWDIAQAAQRLAREVQAGHLQPEDITPQLLQTCLATGDLPLPDLCIRTGGEHRISN 121
Query: 197 FLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
FLLWQ+AY+E F +WPDF + AL + R RRFG S++
Sbjct: 122 FLLWQLAYAELYFSDLFWPDFKHDAMRAALADFASRQRRFGKTSEQ 167
>gi|110800504|ref|YP_696243.1| putative undecaprenyl diphosphate synthase [Clostridium perfringens
ATCC 13124]
gi|168213527|ref|ZP_02639152.1| putative undecaprenyl diphosphate synthase [Clostridium perfringens
CPE str. F4969]
gi|110675151|gb|ABG84138.1| putative undecaprenyl diphosphate synthase [Clostridium perfringens
ATCC 13124]
gi|170714909|gb|EDT27091.1| putative undecaprenyl diphosphate synthase [Clostridium perfringens
CPE str. F4969]
Length = 213
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 66/232 (28%), Positives = 106/232 (45%), Gaps = 22/232 (9%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HIG+I DGN RWA GL + G+ GIE E+ ++ IK +T + F+ +N
Sbjct: 2 RIPKHIGVIPDGNRRWAVENGLEKDQGYLHGIEPGLELFKLCQKLDIKEITYYGFTTDNT 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS--LDDDILCVLKEAEDQTRL 126
+RP + + K + + ++ VIGN S +++ K T
Sbjct: 62 KRPSYQKKAFIDACI----KSVELIANEDCELLVIGNADSPVFPEELKKYTKRT---TMG 114
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
G+ + NY ++ + + D+ S I + + D+ DL+I
Sbjct: 115 KGGIRVNFLVNYGWEWDL-------------NLLKACDIKSKNIYDNIQSKDISRIDLLI 161
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q YS+ I + WP+F+++ FF+AL Y +D GG
Sbjct: 162 RWGGRRRLSGFLPVQSVYSDIYIIDDLWPNFNKDHFFNALEWYKDQDITLGG 213
>gi|158321700|ref|YP_001514207.1| di-trans-poly-cis-decaprenylcistransferase [Alkaliphilus oremlandii
OhILAs]
gi|158141899|gb|ABW20211.1| Di-trans-poly-cis-decaprenylcistransferase [Alkaliphilus oremlandii
OhILAs]
Length = 213
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 71/232 (30%), Positives = 106/232 (45%), Gaps = 22/232 (9%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P+HIGII DGN RWA +GL + G++ GI+ + G+K +T + F+++N
Sbjct: 2 RIPEHIGIIPDGNRRWAEGKGLSKSEGYQSGIDPGLLLFKMCEAAGVKEITYYGFTVDNT 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRL--SLDDDILCVLKEAEDQTRL 126
+RP +I L K N + V GN ++L Q
Sbjct: 62 KRPTDQIKAFTDACIHS----VEILSKENASLLVAGNTQSPMFPKELLPYTTR---QNFG 114
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N G+ + NYS + ++ + S+ I K ++T D+ DLI+
Sbjct: 115 NGGIKVNFLVNYSWKWDL-------------NYLKKSKSKSNNINKQIETYDISKVDLIV 161
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q Y++F + +YWPDF F ALN YN +D GG
Sbjct: 162 RWGGRRRLSGFLPVQSIYADFYVVDDYWPDFKPSHFIEALNWYNNQDITLGG 213
>gi|18310540|ref|NP_562474.1| di-trans, poly-cis-decaprenylcistransferase [Clostridium
perfringens str. 13]
gi|168206784|ref|ZP_02632789.1| putative undecaprenyl diphosphate synthase [Clostridium perfringens
E str. JGS1987]
gi|18145221|dbj|BAB81264.1| probable di-trans,poly-cis- decaprenylcistransferase [Clostridium
perfringens str. 13]
gi|170661785|gb|EDT14468.1| putative undecaprenyl diphosphate synthase [Clostridium perfringens
E str. JGS1987]
Length = 213
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 65/232 (28%), Positives = 106/232 (45%), Gaps = 22/232 (9%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HIG+I DGN RWA GL + G+ GIE E+ ++ IK +T + F+ +N
Sbjct: 2 RIPKHIGVIPDGNRRWAVENGLEKDQGYLHGIEPGLELFKLCQKLDIKEITYYGFTTDNT 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS--LDDDILCVLKEAEDQTRL 126
+RP + + K + + ++ VIGN S +++ K +
Sbjct: 62 KRPSYQKKAFIDACI----KSVELIANEDCELLVIGNADSPVFPEELKKYTKRT-KMGKG 116
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
+N + + + + +A D+ S I + + D+ DL+I
Sbjct: 117 GIRVNFLVNYGWEWDLNLLKAC---------------DIKSKNIYDNIQSKDISRIDLLI 161
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q YS+ I + WP+F+++ FF+AL YN +D GG
Sbjct: 162 RWGGRRRLSGFLPVQSVYSDIYIIDDLWPNFNKDHFFNALEWYNDQDITLGG 213
>gi|220932284|ref|YP_002509192.1| Di-trans-poly-cis-decaprenylcistransferase [Halothermothrix orenii
H 168]
gi|219993594|gb|ACL70197.1| Di-trans-poly-cis-decaprenylcistransferase [Halothermothrix orenii
H 168]
Length = 214
Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats.
Identities = 70/232 (30%), Positives = 110/232 (47%), Gaps = 21/232 (9%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
PDHIG+I DGN RWA + GL R G+ G++ E+ +VG+K LT + F+++N
Sbjct: 2 RIPDHIGVIPDGNRRWALSHGLTREKGYASGLKPGLEVFKLCKKVGVKELTFYGFTMDNT 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRL--SLDDDILCVLKEAEDQTRL 126
+RP ++ K L + + + V+GN ++L ++ +
Sbjct: 62 KRPSTQTEAFTKACIDA----VEMLSREDASLLVVGNTESPKFPRELLKYTRKRHKFGKG 117
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
GL + NY ++ + + + YL++SD+ DLII
Sbjct: 118 --GLKVNFLVNYGWHWDLYNLKQKKVKKSKLQK-------------YLNSSDISRVDLII 162
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q Y++F I +YWPDF E F+ AL Y+ +D GG
Sbjct: 163 RWGGRRRLSGFLPVQSIYADFYVIDDYWPDFKPEHFYEALAWYDKQDITLGG 214
>gi|182627107|ref|ZP_02954826.1| putative undecaprenyl diphosphate synthase [Clostridium perfringens
D str. JGS1721]
gi|177907517|gb|EDT70172.1| putative undecaprenyl diphosphate synthase [Clostridium perfringens
D str. JGS1721]
Length = 213
Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 66/232 (28%), Positives = 106/232 (45%), Gaps = 22/232 (9%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HIG+I DGN RWA GL + G+ GIE E+ ++ IK +T + F+ +N
Sbjct: 2 RIPKHIGVIPDGNRRWAVENGLEKDQGYLHGIEPGLELFKLCQKLDIKEITYYGFTTDNT 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS--LDDDILCVLKEAEDQTRL 126
+RP + + K + + ++ VIGN S +++ K T
Sbjct: 62 KRPSYQKKAFIDACI----KSVELIANEDCELLVIGNDDSPVFPEELKKYTKRT---TMG 114
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
G+ + NY ++ + + D+ S I + + D+ DL+I
Sbjct: 115 KGGIRVNFLVNYGWEWDL-------------NLLKACDIKSKNIYDNIQSKDISRIDLLI 161
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q YS+ I + WP+F+++ FF+AL Y +D GG
Sbjct: 162 RWGGRRRLSGFLPVQSVYSDIYIIDDLWPNFNKDHFFNALEWYKDQDITLGG 213
>gi|182420522|ref|ZP_02643323.2| putative undecaprenyl diphosphate synthase [Clostridium perfringens
NCTC 8239]
gi|182380267|gb|EDT77746.1| putative undecaprenyl diphosphate synthase [Clostridium perfringens
NCTC 8239]
Length = 230
Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats.
Identities = 64/232 (27%), Positives = 105/232 (45%), Gaps = 22/232 (9%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HIG+I DGN RWA GL + G+ GIE E+ ++ IK +T + F+ +N
Sbjct: 19 RIPKHIGVIPDGNRRWAVENGLEKDQGYLHGIEPGLELFKLCQKLDIKEITYYGFTTDNT 78
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS--LDDDILCVLKEAEDQTRL 126
+RP + + K + + ++ VIGN S +++ K +
Sbjct: 79 KRPSYQKKAFIDACI----KSVELIANEDCELLVIGNADSPVFPEELKKYTKRT-KMGKG 133
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
+N + + + + +A D+ S I + + D+ DL+I
Sbjct: 134 GIRVNFLVNYGWEWDLNLLKAC---------------DIKSKNIYDNIQSKDISRIDLLI 178
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q YS+ I + WP+F+++ FF+AL Y +D GG
Sbjct: 179 RWGGRRRLSGFLPVQSVYSDIYIIDDLWPNFNKDHFFNALEWYKDQDITLGG 230
>gi|261329812|emb|CBH12794.1| cis-prenyltransferase-like protein, putative [Trypanosoma brucei
gambiense DAL972]
Length = 419
Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats.
Identities = 73/281 (25%), Positives = 124/281 (44%), Gaps = 54/281 (19%)
Query: 12 DHIGIIMDGNGRWAAARGLP--------------------------------------RC 33
H+ +IMDGN R+ + +
Sbjct: 139 KHLAVIMDGNRRYGQRHSVETVCVKELEDVCEFIFNEDMPLFGVEPIFKRLAFLLKRTKL 198
Query: 34 AGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSL 93
GHR G E E V + I LT++AFS NW RP E+ L+ L + ++ +
Sbjct: 199 DGHRVGGEKLLEFVKDCIDFNISMLTVYAFSTENWSRPALEVKVLMTLFYCYFERMRQTA 258
Query: 94 KKNNIKVRVIGNR-LSLDDDILCVLKEAEDQTRLN--TGLNLFIAFNYSSRDEISRAIKN 150
+K I +R I + I ++ + E++TR + + + + +YS RDEI A
Sbjct: 259 RKQGIFIRFISPAFEMIPSRIRRIMVDIEEETRRHVPRRIVVNVCVSYSGRDEIINACNG 318
Query: 151 IFQD-IESGSVCSHDVDSSLI------------AKYLDTSDVPDPDLIIRTGGEKRLSDF 197
+ Q E + + D+ S ++ A L +P +++RT GE+RLS+F
Sbjct: 319 LLQKRNEYSPISTGDLMSQMLRSVTQADHEEEDASVLFDGGGAEPQILLRTSGEQRLSNF 378
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
LL++ AY+EF+F+ + WP+ +RE L ++ RD+R+G
Sbjct: 379 LLFECAYTEFLFVDKTWPEINREDLVKLLQYHDKRDKRYGK 419
>gi|170763909|ref|ZP_02634995.2| putative undecaprenyl diphosphate synthase [Clostridium perfringens
B str. ATCC 3626]
gi|170712474|gb|EDT24656.1| putative undecaprenyl diphosphate synthase [Clostridium perfringens
B str. ATCC 3626]
Length = 230
Score = 178 bits (453), Expect = 4e-43, Method: Composition-based stats.
Identities = 66/232 (28%), Positives = 106/232 (45%), Gaps = 22/232 (9%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HIG+I DGN RWA GL + G+ GIE E+ ++ IK +T + F+ +N
Sbjct: 19 RIPKHIGVIPDGNRRWAVENGLEKDQGYLHGIEPGLELFKLCQKLDIKEITYYGFTTDNT 78
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS--LDDDILCVLKEAEDQTRL 126
+RP + + K + + ++ VIGN S +++ K T
Sbjct: 79 KRPSYQKMAFIDACI----KSVELIANEDCELLVIGNADSPVFPEELKKYTKRT---TMG 131
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
G+ + NY ++ + + D+ S I + + D+ DL+I
Sbjct: 132 KGGIRVNFLVNYGWEWDL-------------NLLKACDIKSKNIYDNIQSKDISRIDLLI 178
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q YS+ I + WP+F+++ FF+AL Y +D GG
Sbjct: 179 RWGGRRRLSGFLPVQSVYSDIYIIDDLWPNFNKDHFFNALEWYKDQDITLGG 230
>gi|323704142|ref|ZP_08115721.1| Di-trans-poly-cis-decaprenylcistransferase [Thermoanaerobacterium
xylanolyticum LX-11]
gi|323536208|gb|EGB25980.1| Di-trans-poly-cis-decaprenylcistransferase [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 216
Score = 178 bits (453), Expect = 4e-43, Method: Composition-based stats.
Identities = 70/232 (30%), Positives = 109/232 (46%), Gaps = 20/232 (8%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P+HIG+I DGN RWA R +P+ AG+ G+E + E+GIK LT + F+ +N
Sbjct: 3 RIPNHIGVIPDGNRRWAQNRNMPKEAGYSYGLEPGITLYKMCREIGIKELTFYGFTQDNT 62
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRL--SLDDDILCVLKEAEDQTRL 126
+RP + K L+K + + VIGN ++L K
Sbjct: 63 KRPSVQTEAFKKACIDA----VKMLEKEDANLLVIGNYNSPMFPQELLPYCKRKRI---G 115
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
+ + + NY + +++ A+K + + I + + ++ DLII
Sbjct: 116 SGKMKVNFLVNYGWQWDLNNALKALSSGEKRD-----------ILDLISSKEISRIDLII 164
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q YS+F I +YWPDF + F+ AL Y+ +D GG
Sbjct: 165 RWGGRRRLSGFLPVQSIYSDFYVIDDYWPDFKPQHFYDALEWYSKQDITLGG 216
>gi|300856706|ref|YP_003781690.1| undecaprenyl pyrophosphate synthase [Clostridium ljungdahlii DSM
13528]
gi|300436821|gb|ADK16588.1| undecaprenyl pyrophosphate synthase [Clostridium ljungdahlii DSM
13528]
Length = 214
Score = 178 bits (452), Expect = 5e-43, Method: Composition-based stats.
Identities = 71/232 (30%), Positives = 106/232 (45%), Gaps = 21/232 (9%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P+HIGII DGN RWA RGL + G+ G++ E+ ++GI LT + F+ +N
Sbjct: 2 ALPNHIGIIPDGNRRWAVKRGLSKEKGYSFGLKPGIELFKLCEKLGINELTYYGFTTDNT 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRL--SLDDDILCVLKEAEDQTRL 126
+RP + K + L K N + V+GN ++L + +
Sbjct: 62 KRPSIQAKAFTKACI----EAVKILSKENASLLVVGNSESPMFPKELLPYM---VRKDFG 114
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
G+ + NY ++ + + + I L++ D+ DLII
Sbjct: 115 KGGIKVNFLVNYGWEWDLGK------------TKNLSTTNRHSIISSLNSHDISRVDLII 162
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q YS+F I +YWPDF E HAL YN +D GG
Sbjct: 163 RWGGRRRLSGFLPVQSVYSDFYIIDDYWPDFKMEHLIHALKWYNDQDITLGG 214
>gi|110803373|ref|YP_698846.1| undecaprenyl diphosphate synthase [Clostridium perfringens SM101]
gi|110683874|gb|ABG87244.1| putative undecaprenyl diphosphate synthase [Clostridium perfringens
SM101]
Length = 213
Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats.
Identities = 66/232 (28%), Positives = 106/232 (45%), Gaps = 22/232 (9%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HIG+I DGN RWA GL + G+ GI+ E+ ++ IK +T + F+ +N
Sbjct: 2 RIPKHIGVIPDGNRRWAVENGLEKDQGYLNGIKPGLELFKLCQKLDIKEITYYGFTTDNT 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS--LDDDILCVLKEAEDQTRL 126
+RP + + K + + ++ VIGN S +D+ K T
Sbjct: 62 KRPSYQKKAFIDACI----KSVELIANEDCELLVIGNADSPVFPEDLKKYTKRT---TIG 114
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
G+ + NY ++ + + D+ S I + + D+ DL+I
Sbjct: 115 KGGIRVNFLVNYGWEWDL-------------NLLKACDIKSKNIYDNIQSKDISRIDLLI 161
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q YS+ I + WP+F+++ FF+AL Y +D GG
Sbjct: 162 RWGGRRRLSGFLPVQSVYSDIYIIDDLWPNFNKDHFFNALEWYKDQDITLGG 213
>gi|68304118|gb|AAY89717.1| YaeS [Escherichia coli LW1655F+]
Length = 161
Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats.
Identities = 55/152 (36%), Positives = 89/152 (58%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ IIMDGNGRWA +G R GH+ G + V+ AA GI+ LT++AFS NW RP
Sbjct: 10 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRP 69
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
E+S L++L L SL ++N+++R+IG+ + + ++++E T NTGL
Sbjct: 70 AQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLT 129
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSH 163
L IA NY R +I + ++ + + ++ G++
Sbjct: 130 LNIAANYGGRWDIVQGVRQLAEKVQQGNLQPD 161
>gi|320580945|gb|EFW95167.1| cis-prenyltransferase [Pichia angusta DL-1]
Length = 264
Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats.
Identities = 67/218 (30%), Positives = 119/218 (54%), Gaps = 5/218 (2%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGN R+A GLP GHR G E +++ ++G+K++T++AFSI N+ RP +EI
Sbjct: 1 MDGNRRYAKNAGLPLKEGHRAGAESLAKVLNCCFKLGVKDVTVYAFSIENFNRPQNEIDT 60
Query: 78 LVKLIKS---FLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFI 134
+ L+KS ++ + ++ ++++GNR + D+L L++ E+ T + NLFI
Sbjct: 61 IFSLLKSRLAYIANEDTDFRDYDVAIKIVGNRSLVPTDVLADLEKIEESTVSHGSHNLFI 120
Query: 135 AFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD-PDLIIRTGGEKR 193
AF Y+SRD+I ++ I Q ++ + +D + + + D+++RT G R
Sbjct: 121 AFPYTSRDDIVHSMSEIVQKVKRNELGVDSIDEHTVEENFYYRGEAEKVDILVRTSGHTR 180
Query: 194 LSDFLLWQVAY-SEFVFIPEYWPDFSRELFFHALNQYN 230
LSD++LWQ S F WP+F + + +++
Sbjct: 181 LSDYMLWQCHQDSVIEFSNTLWPNFKFYHTWWTIFKWS 218
>gi|28211040|ref|NP_781984.1| undecaprenyl pyrophosphate synthetase [Clostridium tetani E88]
gi|28203479|gb|AAO35921.1| undecaprenyl pyrophosphate synthetase [Clostridium tetani E88]
Length = 220
Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats.
Identities = 69/232 (29%), Positives = 109/232 (46%), Gaps = 21/232 (9%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P+HIGII DGN RWA + + G++ G++ E+ E+GIK LT + F+ +N
Sbjct: 8 RLPEHIGIIPDGNRRWAVKNNMQKKDGYKYGLQPGFEMYDLCRELGIKELTFYGFTKDNN 67
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNR--LSLDDDILCVLKEAEDQTRL 126
+RP + +E + + SL K + ++ V+G+ +++ + +
Sbjct: 68 KRPKDQTTEFRRACV----EAVMSLCKKDAELLVVGDYESDLFPKELIPFTRRTKF---G 120
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
G+ + NY +I +D + G + I S++ DLII
Sbjct: 121 KGGIKINFLVNYGWDWDI--------KDYKEGKKLRYKNTIKNIHS----SEISRIDLII 168
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG RLS FL Q YS+F I + WPDF +E F+ ALN Y +D GG
Sbjct: 169 RWGGRCRLSGFLPLQTVYSDFYIIDDLWPDFKKEHFYDALNWYQNQDITLGG 220
>gi|71027595|ref|XP_763441.1| undecaprenyl diphosphate synthase [Theileria parva strain Muguga]
gi|68350394|gb|EAN31158.1| undecaprenyl diphosphate synthase, putative [Theileria parva]
Length = 267
Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 75/238 (31%), Positives = 120/238 (50%), Gaps = 8/238 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
MV M +H+ +IMDGN R+A L + GH G EI+ ++ G+K +TI
Sbjct: 10 MVFVMKPMLRVEHMALIMDGNRRYAKNLNLQQSQGHLNGFNKLLEILEFSSLFGLKVITI 69
Query: 61 FAFSINNWRRPVSEISELVKLIKSFL--KKGFYSLKKN-NIKVRVIGNRLSLDDDILCVL 117
FAFS+ N+ R EIS+L+ L K L + K+R G+ L +DI +L
Sbjct: 70 FAFSLLNFSRTRKEISDLLNLFVDLSGPKSQLEELCERIGCKIRFCGDFSFLGEDIKQIL 129
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDS----SLIAKY 173
+ + +T + + L + +Y R+EI A+ ++E+ + + D + +
Sbjct: 130 NDIQSKTNHYSKMTLNVCASYGGRNEIINALNKFNSNVENNTTFNTDNTNNNAREEYYRN 189
Query: 174 LDTSDVPDPDLIIRTGGEKRLSDFLLWQVA-YSEFVFIPEYWPDFSRELFFHALNQYN 230
L T D P+L+IRT GE RLSDFL++Q + ++ F F+ E WP+ S L Y+
Sbjct: 190 LYTGDFTPPNLLIRTSGESRLSDFLIYQCSEHTCFYFVKEMWPELSFNRLICILIHYS 247
>gi|290890490|ref|ZP_06553565.1| hypothetical protein AWRIB429_0955 [Oenococcus oeni AWRIB429]
gi|290479886|gb|EFD88535.1| hypothetical protein AWRIB429_0955 [Oenococcus oeni AWRIB429]
Length = 167
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 70/166 (42%), Positives = 92/166 (55%), Gaps = 3/166 (1%)
Query: 79 VKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNY 138
+KL F L +NNIKV IG L + A + T+ NTGL L A NY
Sbjct: 1 MKLPIDFFNTFVPELIENNIKVEGIGEIDDLPEKTRQAFLNAVEDTKDNTGLILNFAINY 60
Query: 139 SSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD---PDLIIRTGGEKRLS 195
R EI A K+I + G + + D+D L L T+ + + PDLIIRT GE+R+S
Sbjct: 61 GGRTEIVDATKSIVNQVLQGKIKTEDIDEKLFQNNLLTNTLAEKANPDLIIRTSGEQRIS 120
Query: 196 DFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
+FLLWQ AYSEF F P+ WPD++ E AL Y+ RDRRFG + +
Sbjct: 121 NFLLWQSAYSEFYFSPKLWPDYTAEDLEEALAAYSNRDRRFGKIRE 166
>gi|239623282|ref|ZP_04666313.1| di-trans-poly-cis-decaprenylcistransferase [Clostridiales bacterium
1_7_47_FAA]
gi|239522248|gb|EEQ62114.1| di-trans-poly-cis-decaprenylcistransferase [Clostridiales bacterium
1_7_47FAA]
Length = 217
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 68/232 (29%), Positives = 107/232 (46%), Gaps = 18/232 (7%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HIGII DGN RWA RG+ + G+R GI + E+GI+ ++ + F+++N
Sbjct: 2 RLPKHIGIIPDGNRRWALDRGMEKKDGYRHGISPGMTLYHMCRELGIEEMSFYGFTVDNT 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRL--SLDDDILCVLKEAEDQTRL 126
+RP ++ K + L K + + V+GN ++L + +
Sbjct: 62 KRPSTQRQAFTKACVAA----VEELSKEDASLLVLGNTQSPMFPPELLPYTRRHDF---G 114
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
G+ + NYS ++ + + S+ I L T+DV DL+I
Sbjct: 115 AGGMRINFLVNYSWEWDM---------GFKPDNSRKAPAASAAIGPVLRTADVSRIDLVI 165
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q YS+ + +YWPDF +E AL Y+ +D GG
Sbjct: 166 RWGGRRRLSGFLPVQSVYSDIYVVDDYWPDFRKEHVEAALKWYSDQDVTLGG 217
>gi|291533212|emb|CBL06325.1| undecaprenyl diphosphate synthase [Megamonas hypermegale ART12/1]
Length = 164
Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats.
Identities = 70/164 (42%), Positives = 99/164 (60%)
Query: 79 VKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNY 138
+ L SFL + + ++N+++ IG L ++ L AE++T+ TG+ +A NY
Sbjct: 1 MNLFSSFLAEQIDEMCEDNVRIHFIGRVDELPGNLPNELHAAEERTKKITGVRFNVAVNY 60
Query: 139 SSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFL 198
RDEI A+KNI +++SG + +D +I L T D+P DL+IRT G+ RLS+FL
Sbjct: 61 GGRDEIVTAVKNIASEVQSGDLSIDKIDDKVIDDNLYTKDLPPVDLMIRTSGDIRLSNFL 120
Query: 199 LWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
LWQ AY+EF F WPDFS E F A+ + RDRRFGGLS K
Sbjct: 121 LWQAAYAEFWFTKTNWPDFSSEEFLQAIVDFQKRDRRFGGLSSK 164
>gi|78042817|ref|YP_359109.1| putative undecaprenyl diphosphate synthase [Carboxydothermus
hydrogenoformans Z-2901]
gi|77994932|gb|ABB13831.1| putative undecaprenyl diphosphate synthase [Carboxydothermus
hydrogenoformans Z-2901]
Length = 213
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 65/232 (28%), Positives = 106/232 (45%), Gaps = 28/232 (12%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HIGII DGN RWA A+G+ + G+ GI+ + +GI LT + F+++N
Sbjct: 8 RLPKHIGIIPDGNRRWAEAQGMTKEKGYFFGIDPGIRLYELCLALGIPELTFYGFTVDNT 67
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRL--SLDDDILCVLKEAEDQTRL 126
+RP + K +K+ L + + + V+GN ++L ++ +
Sbjct: 68 KRPNYQRDAFRKACVEAVKR----LSQRDSALLVVGNTSSPQFPPELLPYTQKRTVFGKG 123
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
+ +N + NY + ++ + L ++D+ DLII
Sbjct: 124 SVKVNFLV--NYGWKWDLEHLAQGF--------------------SALPSADISRVDLII 161
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q Y++F I +YWPDF E + AL+ Y +D GG
Sbjct: 162 RWGGRRRLSGFLPIQSIYADFYVIDDYWPDFKDEHLYQALSWYQEQDITLGG 213
>gi|153955945|ref|YP_001396710.1| UppS2 [Clostridium kluyveri DSM 555]
gi|219856287|ref|YP_002473409.1| hypothetical protein CKR_2944 [Clostridium kluyveri NBRC 12016]
gi|146348803|gb|EDK35339.1| UppS2 [Clostridium kluyveri DSM 555]
gi|219570011|dbj|BAH07995.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 214
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 71/232 (30%), Positives = 103/232 (44%), Gaps = 21/232 (9%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P HIGII DGN RWA G+ + G+ G++ E+ ++GIK LT + F+ +N
Sbjct: 2 SMPAHIGIIPDGNRRWALKNGMAKENGYNFGLKPGIELFKLCEKLGIKELTYYGFTTDNT 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRL--SLDDDILCVLKEAEDQTRL 126
+RP + + + L K N + V+GN +L + T
Sbjct: 62 KRPAPQTKAFTRACI----EAVKILSKENASLLVVGNSDSPMFPKSLLPYTVRKKFGTG- 116
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
G+ + NY ++S + + I L++SD+ DLII
Sbjct: 117 --GIKINFLVNYGWEWDLS------------SVKNLGTTNRTSIMCNLNSSDITRIDLII 162
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q YS+F I +YWPDF E AL Y +D GG
Sbjct: 163 RWGGRRRLSGFLPVQSVYSDFYMIEDYWPDFKPEHLMQALKWYRHQDITLGG 214
>gi|169342881|ref|ZP_02863912.1| putative undecaprenyl diphosphate synthase [Clostridium perfringens
C str. JGS1495]
gi|169299138|gb|EDS81210.1| putative undecaprenyl diphosphate synthase [Clostridium perfringens
C str. JGS1495]
Length = 230
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 22/232 (9%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HIG+I DGN RWA GL + G+ GIE E+ ++ IK +T + F+ +N
Sbjct: 19 RIPKHIGVIPDGNRRWAVENGLEKDQGYLHGIEPGLELFKLCQKLDIKEITYYGFTTDNT 78
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS--LDDDILCVLKEAEDQTRL 126
+RP + + K + + ++ VIGN S +++ K +
Sbjct: 79 KRPSYQKKAFIDACI----KSVELIANEDCELLVIGNADSPVFPEELKKYTKRT-KMGKG 133
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
+N + + + + +A D+ S I + + D+ DL+I
Sbjct: 134 GIRVNFLVNYGWEWDLNLLKAC---------------DIKSKNIYDNIQSKDISRIDLLI 178
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS+FL Q YS+ I + WP+F+++ FF+AL Y +D GG
Sbjct: 179 RWGGRRRLSEFLPVQSVYSDIYIIDDLWPNFNKDHFFNALEWYKDQDITIGG 230
>gi|145484001|ref|XP_001428023.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124395106|emb|CAK60625.1| unnamed protein product [Paramecium tetraurelia]
Length = 238
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 65/232 (28%), Positives = 123/232 (53%), Gaps = 13/232 (5%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P+H+G+IMDGN R+A R + GH +G + F ++ + ++GI+ +++FAFS
Sbjct: 12 LKLGTIPNHVGVIMDGNRRYARQRRIESTEGHIQGYQSFLNLLQWSQKLGIREISVFAFS 71
Query: 65 INNWRRPVSEISELVKLIK---SFLKKGFYSLKKNNIKVRVIGNRLSLDD-DILCVLKEA 120
I N+ R E+ L++L+K L+ + KN + + G+ L D ++ L+E
Sbjct: 72 IENYNRQKEEVQFLMQLMKQKIHHLQHDLNFIDKNQVNFKCCGDLDFLQDQELKEKLQEL 131
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E+ + + L + F+Y+ +E+ +AI+++ S + + +L +
Sbjct: 132 ENYSSKYSQYKLNLCFSYNFTNELDKAIQSM------PKGLSKNEFFQNLNSHLM--VLN 183
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFFHALNQYNL 231
PD+++RT GE RLS+FLL+Q+ + FI + WP+ S F + + Y
Sbjct: 184 SPDILLRTSGETRLSNFLLYQIREKTVIHFIDKKWPELSFLDFCNMILFYRK 235
>gi|296084797|emb|CBI25938.3| unnamed protein product [Vitis vinifera]
Length = 242
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 64/235 (27%), Positives = 98/235 (41%), Gaps = 22/235 (9%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P+HI IMDGN R+A L AG++ G ++ ++G+K + I+AFSI+N
Sbjct: 26 SHIPNHIAFIMDGNRRYAKKWKLEEGAGYKAGFLALLSMIKYCYKLGVKYIAIYAFSIDN 85
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
+RR E+ ++ L+ ++ N V V+ S D+ + V + +D+
Sbjct: 86 FRRRPQEVQYVMDLMHEKIQGLLKEQSIVNQHVCVV--YTSSDEIVHSVQESCKDKWGET 143
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
LN N DEI D + K++ PDPD++IR
Sbjct: 144 QVLNPSKGCNVGGDDEIQDYSIIKLVD---------------LEKHMYMRFAPDPDILIR 188
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
T G LS+FLLWQ WP+ A+ + R L KK
Sbjct: 189 TSG--CLSNFLLWQATTCLLYCPTALWPEVGLRHLMWAVLNFQ---RNHSYLEKK 238
>gi|262167721|ref|ZP_06035423.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae RC27]
gi|262023786|gb|EEY42485.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae RC27]
Length = 157
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 53/150 (35%), Positives = 92/150 (61%)
Query: 93 LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIF 152
+ KNN+++RVIG++ + + + +AE T NTG+ + IA NY + +I +A + +
Sbjct: 1 MHKNNLRLRVIGDKSRFSERLQTKIAQAEQLTASNTGMVVNIAANYGGQWDILQATQALA 60
Query: 153 QDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPE 212
+ + G + D+D + ++L +D+PD DL+IRT GE R+S+F+LWQ+AY+E F P
Sbjct: 61 EKVTQGELQPSDIDEDVFKQHLTMADLPDVDLLIRTSGECRISNFMLWQLAYAEMYFTPV 120
Query: 213 YWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+WP+F A+ + R+RRFG ++
Sbjct: 121 FWPEFDENCLIEAVTWFVNRERRFGCTGEQ 150
>gi|253682797|ref|ZP_04863592.1| UppS2 [Clostridium botulinum D str. 1873]
gi|253560996|gb|EES90450.1| UppS2 [Clostridium botulinum D str. 1873]
Length = 214
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 69/232 (29%), Positives = 109/232 (46%), Gaps = 21/232 (9%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P+HIGII DGN RWA GL + G+ G+ + ++G+K +T + F+ +N
Sbjct: 2 RIPNHIGIIPDGNRRWAVNNGLTKEKGYNSGLTPGLMLFRLCKKIGVKEITYYGFTTDNT 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRL--SLDDDILCVLKEAEDQTRL 126
+RP + K L K + + V+GN ++L K +
Sbjct: 62 KRPKIQRLAFSKACVDA----VNLLSKEDADLLVVGNSDSPMFPKELLPFTKR---KAFG 114
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
G+ + NY ++S +N + + IA L ++D+ DLII
Sbjct: 115 KGGIKVNFLVNYGWEWDLSNLKENTSS------------NRNSIANTLKSNDISRVDLII 162
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q YS+F + EYWP+F+++ F++AL YN +D GG
Sbjct: 163 RWGGRRRLSGFLPVQSIYSDFYVVDEYWPNFNKDHFYNALKWYNTQDITLGG 214
>gi|163784141|ref|ZP_02179082.1| Undecaprenyl pyrophosphate synthetase [Hydrogenivirga sp.
128-5-R1-1]
gi|159880585|gb|EDP74148.1| Undecaprenyl pyrophosphate synthetase [Hydrogenivirga sp.
128-5-R1-1]
Length = 145
Score = 175 bits (445), Expect = 3e-42, Method: Composition-based stats.
Identities = 63/149 (42%), Positives = 93/149 (62%), Gaps = 6/149 (4%)
Query: 93 LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIF 152
L ++NIK++ IG R +L + IL ++E E++T+ +G+NL +A NYS R EI A+ I
Sbjct: 1 LIEDNIKLKFIGRRENLPEMILKTIEEGEEKTKNCSGMNLVVALNYSGRAEIVDAVNEII 60
Query: 153 QDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPE 212
+ + G + Y D+PDPDL+IRT GE+R+S+F+LWQ+AY+EF F P
Sbjct: 61 KSGKKG------ITEENFKNYFYFPDLPDPDLLIRTSGEQRISNFMLWQMAYTEFYFTPV 114
Query: 213 YWPDFSRELFFHALNQYNLRDRRFGGLSK 241
WPDF + F AL Y R+RRFG ++
Sbjct: 115 LWPDFDEDEFLKALYDYQSRERRFGRITA 143
>gi|73669833|ref|YP_305848.1| di-trans-poly-cis-decaprenylcistransferase [Methanosarcina barkeri
str. Fusaro]
gi|72396995|gb|AAZ71268.1| di-trans-poly-cis-decaprenylcistransferase [Methanosarcina barkeri
str. Fusaro]
Length = 223
Score = 175 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 67/232 (28%), Positives = 105/232 (45%), Gaps = 22/232 (9%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ II DGN RWA ARGL + G+ G+ ++ ++GI +T F F+ +N
Sbjct: 12 RLPRHVAIIPDGNRRWAMARGLEKHEGYDNGVIPGLKVYDICVKIGIDEVTFFGFTQDNT 71
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS--LDDDILCVLKEAEDQTRL 126
+RP + V K + K + ++ V+GN S ++L K +
Sbjct: 72 KRPQIQRKAFVDACI----KSVQEISKRDAEILVVGNTDSTIFPKELLAYTKRTKV---G 124
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
+ + NY +++ A N DS I + + ++++P DL+I
Sbjct: 125 KGKIKINFLINYGWYWDLAYAFDNSS-------------DSKKIVENIASAEIPRIDLLI 171
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS L Q YS+ + E WPDF E F+AL Y +D GG
Sbjct: 172 RWGGRRRLSGMLPVQTVYSDIYVVDEMWPDFKPEHLFNALEFYQEQDITLGG 223
>gi|154321075|ref|XP_001559853.1| hypothetical protein BC1G_01412 [Botryotinia fuckeliana B05.10]
gi|150851950|gb|EDN27142.1| hypothetical protein BC1G_01412 [Botryotinia fuckeliana B05.10]
Length = 353
Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats.
Identities = 76/305 (24%), Positives = 122/305 (40%), Gaps = 71/305 (23%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ +MDGN R+A + + GH G E I+ + G+K +T+
Sbjct: 30 LIGALRQGPIPQHVAFVMDGNRRFARSHKIETVEGHNLGFEALARILEVCYKSGVKVVTV 89
Query: 61 FAFSINNWRRPVSEISELVKLIKSF---LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+++ K L + L + VRV+G R + DD+L +
Sbjct: 90 YAFSIENFKRSKYEVDALMEMAKVKLVQLAQHGDLLDRYGASVRVLGQRNLVKDDVLEAI 149
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL-IAKYLDT 176
A D T+ N L I F Y+SRDEI+ AIK +D + S I + L +
Sbjct: 150 DRAVDMTKSNGDCALNICFPYTSRDEITTAIKTTVEDYSKPTHTQQRPFSQTRITQKLKS 209
Query: 177 SDV----------------------------------------------PDPDLI----- 185
+V PDP+ I
Sbjct: 210 RNVNSTSKSAVRASSPTPSNISEPDESVSSSTTLNPEPSPISSPEAGVFPDPESISIDTL 269
Query: 186 ---IRTGGEK------RLSD------FLLWQVAY-SEFVFIPEYWPDFSRELFFHALNQY 229
+ T G+ R S F+LWQ +E VF+ WP+F F L ++
Sbjct: 270 EENLFTAGDPPLDLLIRTSGVNRLSDFMLWQCHEDTEIVFLDCLWPEFDLWQFLPVLVEW 329
Query: 230 NLRDR 234
+ +
Sbjct: 330 QWKQK 334
>gi|311258746|ref|XP_003127762.1| PREDICTED: dehydrodolichyl diphosphate synthase-like [Sus scrofa]
Length = 289
Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats.
Identities = 57/234 (24%), Positives = 106/234 (45%), Gaps = 9/234 (3%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IMDGN R+A + R GH +G E + +G+ +T++AFS
Sbjct: 20 IKAGPMPKHIAFIMDGNRRYARKCQVERQEGHSQGFNKLAETLRWCLNLGVLEVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSF---LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R SE+ L+ L + L + L+K+ + +RV+G+ L D+ ++ +A
Sbjct: 80 IENFKRSKSEVDGLMDLARQKFSRLMEEQEKLQKHGVCIRVLGDLHLLPLDLQELIAQAV 139
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSH-----DVDSSLIAKYLDT 176
T+ L + F Y+SR EIS A++ + +E G + + + ++
Sbjct: 140 QATKNYNRCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPRYPQLWSMVTDRENRHAQN 199
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
+P + + ++S VF P WP+++ A+ Q+
Sbjct: 200 RKIPPKSAAWARSPVMNVCG-KICGTSHSCLVFQPVLWPEYTFWNLCEAILQFQ 252
>gi|160939966|ref|ZP_02087312.1| hypothetical protein CLOBOL_04856 [Clostridium bolteae ATCC
BAA-613]
gi|158437110|gb|EDP14876.1| hypothetical protein CLOBOL_04856 [Clostridium bolteae ATCC
BAA-613]
Length = 207
Score = 175 bits (443), Expect = 6e-42, Method: Composition-based stats.
Identities = 66/232 (28%), Positives = 99/232 (42%), Gaps = 28/232 (12%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HIGII DGN RWA +G+ + G+ GI + E+GI ++ + F+ +N
Sbjct: 2 RLPKHIGIIPDGNRRWAKGQGMDKSEGYGHGISPGMSLYRMCRELGIGEMSFYGFTTDNT 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNR--LSLDDDILCVLKEAEDQTRL 126
+RP ++ + + L K + + V+GN ++L +
Sbjct: 62 KRPSAQRQAFTRACVAA----VEELAKEDASLLVLGNTKSPMFPHELLPFTARHDF---G 114
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
G+ + NYS ++ I L T++V DLII
Sbjct: 115 KGGMKINFLVNYSWEWDL-------------------GYKDETIGPGLKTAEVSRIDLII 155
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q YS+F + +YWPDF RE AL Y +D GG
Sbjct: 156 RWGGRRRLSGFLPVQSVYSDFYVVDDYWPDFKREHVEDALKWYAAQDITLGG 207
>gi|317471593|ref|ZP_07930937.1| di-trans,poly-cis-decaprenylcistransferase [Anaerostipes sp.
3_2_56FAA]
gi|316900908|gb|EFV22878.1| di-trans,poly-cis-decaprenylcistransferase [Anaerostipes sp.
3_2_56FAA]
Length = 178
Score = 174 bits (442), Expect = 7e-42, Method: Composition-based stats.
Identities = 68/150 (45%), Positives = 98/150 (65%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M S P+H+ II+DGNGRWA R LPR GH +G + I+ A ++GIK LT++AFS
Sbjct: 1 MESMRVPEHVAIILDGNGRWAKKRFLPRNMGHAQGSKTVERIIEDAFDMGIKYLTVYAFS 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
NWRRP E+ L+KL++ +LK KNN++VRVIG+ L +D+ +++ E+ +
Sbjct: 61 TENWRRPKDEVDALMKLLRDYLKTCIKRANKNNMRVRVIGDVTGLSEDLREKIEQLEEAS 120
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQD 154
+ NTG+N IA NY SRDE+ RA+K + D
Sbjct: 121 KGNTGINFTIALNYGSRDEMIRAMKKMAGD 150
>gi|20090682|ref|NP_616757.1| di-trans-poly-cis-decaprenylcistransferase [Methanosarcina
acetivorans C2A]
gi|19915731|gb|AAM05237.1| di-trans-poly-cis-decaprenylcistransferase [Methanosarcina
acetivorans C2A]
Length = 224
Score = 174 bits (442), Expect = 8e-42, Method: Composition-based stats.
Identities = 67/232 (28%), Positives = 105/232 (45%), Gaps = 22/232 (9%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HI II DGN RWA RGL + G++ GI E+ ++GI +T F F+ +N
Sbjct: 13 RLPGHIAIIPDGNRRWALDRGLEKHEGYKHGIVPGLELYDICVKIGIGEVTFFGFTQDNT 72
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNR--LSLDDDILCVLKEAEDQTRL 126
+RP + V K L K++ ++ V+GN ++L K +
Sbjct: 73 KRPQIQRKAFVDACI----KSVKELSKHDAELLVVGNTNSDMFPKELLAYTKRTKF---G 125
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
+ + NY +++ A + DS + + + ++++P DL+I
Sbjct: 126 KGKVRINFLVNYGWYWDLTYAF-------------ENSSDSKKMIENIASAEIPRIDLLI 172
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS L Q YS+ + E WPDF E F+AL Y +D GG
Sbjct: 173 RWGGRRRLSGMLPVQTVYSDIYVVDEMWPDFKPEHLFNALEFYQDQDITLGG 224
>gi|123471694|ref|XP_001319045.1| undecaprenyl diphosphate synthase family protein [Trichomonas
vaginalis G3]
gi|121901819|gb|EAY06822.1| undecaprenyl diphosphate synthase family protein [Trichomonas
vaginalis G3]
Length = 240
Score = 174 bits (442), Expect = 8e-42, Method: Composition-based stats.
Identities = 62/238 (26%), Positives = 112/238 (47%), Gaps = 14/238 (5%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLP-RCAGHRKGIEVFNEIVAAAAEV-GIKNL 58
++ + + P H+ I+MDGN R+A L GH+ G + E++ +++ GI+ L
Sbjct: 8 LLRIIDAGEIPRHVAIVMDGNRRYARKEHLESITMGHKMGADKLKEVIEWFSKLNGIEML 67
Query: 59 TIFAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILC 115
+++AFSI N++R E++ L+ L +S K+ + KNN K+ IG L+ ++
Sbjct: 68 SVYAFSILNFQRAQQEVNGLMDLAESTFKELADNPEFFTKNNCKINFIGRIEMLEQRVID 127
Query: 116 VLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD 175
+ N L I Y+S DEI + ++ + + K+L
Sbjct: 128 QINRVNQLGPKNPKFILNICVCYTSHDEIEHSRDECIENQFEP-------NYENVFKHLQ 180
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
DL+IRT G R+S++LL Q + + + + WP+ S L ++ LR+
Sbjct: 181 LPM--KVDLLIRTSGVMRMSNYLLLQCSDANIIVTDKLWPELSIWDLSFILIKHQLRN 236
>gi|68066222|ref|XP_675094.1| dehydrodolichyl diphosphate synthetase [Plasmodium berghei strain
ANKA]
gi|56494076|emb|CAI00192.1| dehydrodolichyl diphosphate synthetase, putative [Plasmodium
berghei]
Length = 317
Score = 174 bits (442), Expect = 8e-42, Method: Composition-based stats.
Identities = 78/268 (29%), Positives = 125/268 (46%), Gaps = 51/268 (19%)
Query: 13 HIG-IIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
HI IIMDGN R+A GL GH G + I+ ++ IK L++FAFS+ N+ R
Sbjct: 35 HISSIIMDGNRRFAKQMGLHTSIGHYLGSKNLIHIIEICIQLNIKILSVFAFSLLNYNRS 94
Query: 72 VSEISELVKLIKSFLKKG---FYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
EI L L FL +K+N I++R+IGN +++ ++ E++T+ +
Sbjct: 95 PEEIHILFYLNLFFLINEEYFLKFVKQNKIRIRIIGNLSYINEAYREIIHNTEEKTKHHD 154
Query: 129 GLNLFIAFNYSSRDEI-------------------------------------------- 144
L L I F+Y+SR+E+
Sbjct: 155 NLILNIFFSYTSRNEMNLCKINPNLYFDSYKDLLKKRNINYACANSNNSDKKNIQINPKI 214
Query: 145 --SRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQV 202
++ + + S+ + + L TSD+P PD++IRT GE+RLSDFLL+Q+
Sbjct: 215 KNTQISQVQCNCGKVCSLDENQIKILNYHNKLLTSDIPPPDILIRTSGEQRLSDFLLYQI 274
Query: 203 A-YSEFVFIPEYWPDFSRELFFHALNQY 229
+ ++E FI +YWP F+ F + + Y
Sbjct: 275 SEFTEIYFIDDYWPLFNFLKFTYVILHY 302
>gi|323701427|ref|ZP_08113101.1| Di-trans-poly-cis-decaprenylcistransferase [Desulfotomaculum
nigrificans DSM 574]
gi|323533686|gb|EGB23551.1| Di-trans-poly-cis-decaprenylcistransferase [Desulfotomaculum
nigrificans DSM 574]
Length = 217
Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 70/232 (30%), Positives = 100/232 (43%), Gaps = 23/232 (9%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HIGII DGN RWA LP+ AG+ GI+ + E+GI +T + F+ +N
Sbjct: 7 RLPKHIGIIPDGNRRWAQLHNLPKHAGYDYGIKPGFTLYETCLELGIPEVTFYGFTQDNT 66
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGN--RLSLDDDILCVLKEAEDQTRL 126
+RP + K L + + VIGN ++L QT
Sbjct: 67 KRPAVQKQAFQKACVDA----VNILANRDASLLVIGNSASPQFPKELLPFTSR---QTFG 119
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
+ + NYS + ++S + N S+ S D+ DLII
Sbjct: 120 RDLIKINFLVNYSWKWDLSYGLNNGPTQDLHESIASKDIS--------------RIDLII 165
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q Y++F + E WPDF + F+ AL Y +D GG
Sbjct: 166 RWGGRRRLSGFLPVQSIYADFYIVDELWPDFQLDQFYEALRWYETQDITLGG 217
>gi|57167824|ref|ZP_00366964.1| undecaprenyl diphosphate synthase [Campylobacter coli RM2228]
gi|57020946|gb|EAL57610.1| undecaprenyl diphosphate synthase [Campylobacter coli RM2228]
Length = 187
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 63/196 (32%), Positives = 106/196 (54%), Gaps = 9/196 (4%)
Query: 43 FNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRV 102
+++ A E GI NL++FAFS NW RP EI + +L+ L + +KNN+++R
Sbjct: 1 MQKLMEACVEEGISNLSLFAFSTENWNRPQDEIEFIFELLDRCLDEALKEFEKNNVRLRA 60
Query: 103 IGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCS 162
IG+ LD + + E++T+ L + +A +Y ++DEI R++K + +
Sbjct: 61 IGDLSRLDTHLQEKIALVEEKTKHCDLLCVNLAISYGAKDEIVRSVKRLIEKGL------ 114
Query: 163 HDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELF 222
+++ I+ LD D DL++R G KRLS+FLLWQ AY+E F +P ++ F
Sbjct: 115 -EINEKNISDNLDLPL--DVDLMLRVGNAKRLSNFLLWQCAYAEIYFSETLFPSLTKREF 171
Query: 223 FHALNQYNLRDRRFGG 238
+ ++ R+R FG
Sbjct: 172 KKIIKEFRKRERTFGK 187
>gi|302385340|ref|YP_003821162.1| Di-trans,poly-cis-decaprenylcistransferase [Clostridium
saccharolyticum WM1]
gi|302195968|gb|ADL03539.1| Di-trans,poly-cis-decaprenylcistransferase [Clostridium
saccharolyticum WM1]
Length = 207
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 65/232 (28%), Positives = 103/232 (44%), Gaps = 28/232 (12%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HIGII DGN RWA +G+ + AG+ GI + ++GIK +T + F+++N
Sbjct: 2 RIPKHIGIIPDGNRRWAVDKGMGKEAGYENGISPGMVLYHLCRKLGIKEMTFYGFTVDNT 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRL--SLDDDILCVLKEAEDQTRL 126
+RP + K K L K + ++ V+G ++ +
Sbjct: 62 KRPAVQRDAFSKACV----KAVEELSKEDAELLVLGKTTSAMFPKELKPYTSRHQF---G 114
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
+ G+ + NYS ++ + I L T+DV DL+I
Sbjct: 115 SGGIKINFLVNYSWEWDL-------------------GLHDGAIGPALKTADVSRIDLVI 155
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q YS+ I +YWPDF+ + + A+ Y+ +D GG
Sbjct: 156 RWGGRRRLSGFLPVQSVYSDMYVIDDYWPDFTPQHVYDAIEWYSRQDVTLGG 207
>gi|258514281|ref|YP_003190503.1| Di-trans,poly-cis-decaprenylcistransferase [Desulfotomaculum
acetoxidans DSM 771]
gi|257777986|gb|ACV61880.1| Di-trans,poly-cis-decaprenylcistransferase [Desulfotomaculum
acetoxidans DSM 771]
Length = 220
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 66/232 (28%), Positives = 107/232 (46%), Gaps = 21/232 (9%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HIGII DGN RWA ++G + AG+ G+E ++ ++G+K LT + F+ +N
Sbjct: 8 RLPKHIGIIPDGNRRWAQSKGFAKEAGYEFGLEPGLQLYDLCVKLGVKELTFYGFTQDNT 67
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS--LDDDILCVLKEAEDQTRL 126
+RP ++ K L + + + VIGN S ++ K
Sbjct: 68 KRPSAQRKAFQKACTDA----VKMLSQKDASLLVIGNAASPLFPPELKVYTKRQVF---G 120
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
+ + NY + ++ A++ + + K + +S+V DLII
Sbjct: 121 KDLIKINFLVNYGWKWDLYSALQTSSFNQTNPV------------KAIASSEVSRIDLII 168
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q YS+F + + WPDF + F+ AL Y+ +D GG
Sbjct: 169 RWGGRRRLSGFLPIQSIYSDFYIVEDMWPDFKPDHFYEALAWYDCQDTTLGG 220
>gi|298675491|ref|YP_003727241.1| Di-trans-poly-cis-decaprenylcistransferase [Methanohalobium
evestigatum Z-7303]
gi|298288479|gb|ADI74445.1| Di-trans-poly-cis-decaprenylcistransferase [Methanohalobium
evestigatum Z-7303]
Length = 219
Score = 172 bits (437), Expect = 3e-41, Method: Composition-based stats.
Identities = 55/232 (23%), Positives = 104/232 (44%), Gaps = 16/232 (6%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HIG+I DGN RWA RGL + G+ G++ E++ ++G++ LT + F+++N
Sbjct: 2 RIPKHIGVIPDGNRRWALKRGLSKEKGYDYGVDPGIELIRLCKKMGVEELTFYGFTMDNT 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRL--SLDDDILCVLKEAEDQTRL 126
+R + + V+G+ + ++ +T
Sbjct: 62 KRTSEQTKAFTNACIQAANGAINE----GSQFLVVGDTESPMFPEKLIPYTSR---KTFG 114
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
+ + + + NY + ++ ++ + + + I +++ ++ DLII
Sbjct: 115 DGNIKVNLLVNYGWQWDLKGLKNLDNKNKSTNNKKN-------IMYLINSKEISRIDLII 167
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q YS+F + YWPDF + A++ Y+ +D GG
Sbjct: 168 RWGGRRRLSGFLPVQSVYSDFYVVDNYWPDFKPKHLNDAIDWYDKQDITLGG 219
>gi|322805647|emb|CBZ03212.1| undecaprenyl pyrophosphate synthetase [Clostridium botulinum H04402
065]
Length = 215
Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats.
Identities = 68/232 (29%), Positives = 109/232 (46%), Gaps = 20/232 (8%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P+HIGII DGN RWA +G+ + G++ G+ + VGI +T + F+ +N
Sbjct: 2 RVPNHIGIIPDGNRRWANNKGMEKQCGYKFGLNPGLILFRLCKAVGINEITYYGFTTDNN 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRL--SLDDDILCVLKEAEDQTRL 126
+RP + K + L + + V+GN ++L KE + +
Sbjct: 62 KRPKVQRESFTKACV----EAVEMLCNEDASLLVVGNTESSMFPKELLPYTKERKVFKKG 117
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
+N + + + QD+E+ + S + I K++ ++D+ DLII
Sbjct: 118 GIKVNFLVNYGWEWD----------LQDLENNKLSSRN----KINKHIKSTDISRVDLII 163
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q YS+F I +YWPDF E + AL Y+ +D GG
Sbjct: 164 RWGGRRRLSGFLPIQSVYSDFYIIEDYWPDFKSEHLYEALEWYDKQDITLGG 215
>gi|323692883|ref|ZP_08107108.1| Di-trans-poly-cis-decaprenylcistransferase [Clostridium symbiosum
WAL-14673]
gi|323503058|gb|EGB18895.1| Di-trans-poly-cis-decaprenylcistransferase [Clostridium symbiosum
WAL-14673]
Length = 207
Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats.
Identities = 65/232 (28%), Positives = 105/232 (45%), Gaps = 28/232 (12%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P+H+GII DGN RWA +GL + G+ +GI + ++GIK ++ + F+ +N
Sbjct: 2 RIPEHVGIIPDGNRRWALQKGLNKEDGYERGISPGMSLFRTCQKLGIKEMSFYGFTADNT 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRL--SLDDDILCVLKEAEDQTRL 126
+RP + K + L + N + V+GN ++L +
Sbjct: 62 KRPSVQRLAFTKACVAA----VKVLSEENASLLVVGNTDSAMFPKELLPYTTRRDF---G 114
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
G+ + NYS ++ + + +I L T+DV DL+I
Sbjct: 115 KGGMKINFLVNYSWEWDL-------------------GLKNGMIGPKLGTADVSRVDLVI 155
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q YS+F + +YWPDFS A++ Y+ +D GG
Sbjct: 156 RWGGRRRLSGFLPVQSVYSDFYVVDDYWPDFSPRHVEEAISWYSRQDVTLGG 207
>gi|329893774|ref|ZP_08269862.1| Undecaprenyl pyrophosphate synthetase [gamma proteobacterium
IMCC3088]
gi|328923497|gb|EGG30811.1| Undecaprenyl pyrophosphate synthetase [gamma proteobacterium
IMCC3088]
Length = 170
Score = 172 bits (435), Expect = 5e-41, Method: Composition-based stats.
Identities = 61/164 (37%), Positives = 102/164 (62%)
Query: 79 VKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNY 138
+ L +L+ L ++ ++++ IG R L ++ +++ +E T N L IA +Y
Sbjct: 1 MALFMRYLRNEVQELHEDGVQIKFIGRRDRLSARVVQLMERSEALTADNHRSTLVIAVDY 60
Query: 139 SSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFL 198
R +I++A + DI++G V ++ V+ +++++YL T +P+PDL IRTGG+ R+S+F+
Sbjct: 61 GGRWDIAQASLRLAADIQAGRVDANSVNETMMSEYLVTGHLPEPDLCIRTGGDARVSNFM 120
Query: 199 LWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
LWQ AY+EF F WPDF R F HAL + RDRRFGG +++
Sbjct: 121 LWQFAYTEFYFTDTLWPDFDRTAFEHALIDFGSRDRRFGGRNEE 164
>gi|323483879|ref|ZP_08089256.1| hypothetical protein HMPREF9474_01005 [Clostridium symbiosum
WAL-14163]
gi|323402833|gb|EGA95154.1| hypothetical protein HMPREF9474_01005 [Clostridium symbiosum
WAL-14163]
Length = 207
Score = 172 bits (435), Expect = 5e-41, Method: Composition-based stats.
Identities = 65/232 (28%), Positives = 105/232 (45%), Gaps = 28/232 (12%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P+H+GII DGN RWA +GL + G+ +GI + ++GIK ++ + F+ +N
Sbjct: 2 RIPEHVGIIPDGNRRWALQKGLNKEDGYERGISPGMSLFHTCQKLGIKEMSFYGFTADNT 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRL--SLDDDILCVLKEAEDQTRL 126
+RP + K + L + N + V+GN ++L +
Sbjct: 62 KRPSVQRLAFTKACVAA----VKVLSEENASLLVVGNTDSAMFPKELLPYTTRRDF---G 114
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
G+ + NYS ++ + + +I L T+DV DL+I
Sbjct: 115 KGGMKINFLVNYSWEWDL-------------------GLKNGMIGPKLGTADVSRVDLVI 155
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q YS+F + +YWPDFS A++ Y+ +D GG
Sbjct: 156 RWGGRRRLSGFLPVQSVYSDFYVVDDYWPDFSPRHVEEAISWYSRQDVTLGG 207
>gi|321257983|ref|XP_003193770.1| prenyltransferase [Cryptococcus gattii WM276]
gi|317460240|gb|ADV21983.1| prenyltransferase, putative [Cryptococcus gattii WM276]
Length = 245
Score = 171 bits (434), Expect = 6e-41, Method: Composition-based stats.
Identities = 59/243 (24%), Positives = 107/243 (44%), Gaps = 25/243 (10%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ + P H+ +MDGN R+A G +GH +G + + I+ ++I
Sbjct: 20 ILFLLSLGPIPQHVAFVMDGNRRYARELGQQVESGHTEGFNALRRTLEICLRLRIRAVSI 79
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AF+I+N+ R E+ L+ L K L + L++ +K+R IG L D+L +
Sbjct: 80 YAFAIDNFSRSEKEVGALMNLAKQRLTELCQHGDLLEEYGVKIRFIGQLDLLPPDVLQAV 139
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
++ E T+ N N A + +S+AI + + + +
Sbjct: 140 RDMEAMTQGNK--NDITAKDVFDSLGVSKAINTVDKSLFVNPEEPEKL------------ 185
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVA-YSEFVFIPEYWPDFSRELFFHALNQYNLR--DR 234
D+++RT KRLSDF++WQ ++ F+ YWP+F L + + R
Sbjct: 186 -----DILVRTSDVKRLSDFMMWQACDDTQLHFVKTYWPEFGLSDMLPILLGWQQKVWMR 240
Query: 235 RFG 237
+ G
Sbjct: 241 KLG 243
>gi|58266028|ref|XP_570170.1| prenyltransferase [Cryptococcus neoformans var. neoformans JEC21]
gi|57226403|gb|AAW42863.1| prenyltransferase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 245
Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 25/236 (10%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
P H+ +MDGN R+A G +GH +G + + I+ ++I+AF+I+N
Sbjct: 27 GPIPHHVAFVMDGNRRYARELGQQVESGHAEGFNALRRTLEICLRLRIRAVSIYAFAIDN 86
Query: 68 WRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
+ R E+ L+ L K L + L++ +K+R IG L D+L +++ E T
Sbjct: 87 FSRSEKEVGALMNLAKQRLAELCEHGDLLEEYGVKIRFIGQLDMLPPDVLQAVRDMEAMT 146
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ N N A + +S+AI + + + + D+
Sbjct: 147 QDNK--NDITAKDVFDSLGVSKAINTVDKSLFVNPEEPEKL-----------------DI 187
Query: 185 IIRTGGEKRLSDFLLWQVA-YSEFVFIPEYWPDFSRELFFHALNQYNLR--DRRFG 237
++RT KRLSDF++WQ + ++ F+ YWP+F L + + R+ G
Sbjct: 188 LVRTSDVKRLSDFMMWQASDDTQLHFVKTYWPEFGLSDMLPILLGWQQKAWMRKLG 243
>gi|188590328|ref|YP_001922033.1| undecaprenyl pyrophosphate synthetase [Clostridium botulinum E3
str. Alaska E43]
gi|188500609|gb|ACD53745.1| undecaprenyl pyrophosphate synthetase [Clostridium botulinum E3
str. Alaska E43]
Length = 213
Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats.
Identities = 71/232 (30%), Positives = 104/232 (44%), Gaps = 22/232 (9%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HIG+I DGN RWA A GL + G+ G+ E+ + GI +T + F+++N
Sbjct: 2 RIPKHIGVIPDGNRRWALANGLTKDKGYSFGVNPGLEVFKLCQKEGISEVTFYGFTVDNT 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS--LDDDILCVLKEAEDQTRL 126
+RP + + + L K N ++ V+GN S ++L K T
Sbjct: 62 KRPSEQKIAFTEACI----ESVKLLTKENCEILVLGNTDSKLFPKELLPFSKRT---TFG 114
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
G+ + NY ++ + +D I Y+ + D+ DLII
Sbjct: 115 TGGIKVNFLMNYGWEWDL-------------NILKENDSSHKGIIPYIHSKDISRIDLII 161
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q YS+F I YWP F F+ ALN YN +D GG
Sbjct: 162 RWGGRRRLSGFLPAQCVYSDFYVIDSYWPAFKTTEFYDALNWYNDQDVTLGG 213
>gi|187932432|ref|YP_001887098.1| undecaprenyl pyrophosphate synthetase [Clostridium botulinum B str.
Eklund 17B]
gi|187720585|gb|ACD21806.1| undecaprenyl pyrophosphate synthetase [Clostridium botulinum B str.
Eklund 17B]
Length = 213
Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats.
Identities = 72/232 (31%), Positives = 104/232 (44%), Gaps = 22/232 (9%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HIG+I DGN RWA A GL + G+ GI E+ + GI +T + F+++N
Sbjct: 2 RIPKHIGVIPDGNRRWALANGLTKDKGYSFGINPGLEVFKLCQKEGISEVTFYGFTVDNT 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS--LDDDILCVLKEAEDQTRL 126
+RP + + + L K N ++ V+GN S ++L K T
Sbjct: 62 KRPSEQKIAFTEACI----ESVKLLTKENCEILVLGNIDSKLFPKELLPFSKRT---TFG 114
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
G+ + NY ++ + +D I Y+ + D+ DLII
Sbjct: 115 TGGIKVNFLMNYGWEWDL-------------NILKENDPSHKGIIPYIHSKDISRIDLII 161
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q YS+F I YWP F F+ ALN YN +D GG
Sbjct: 162 RWGGRRRLSGFLPAQCVYSDFYVIDSYWPAFKEHEFYDALNWYNDQDVTLGG 213
>gi|168179991|ref|ZP_02614655.1| undecaprenyl pyrophosphate synthetase homolog [Clostridium
botulinum NCTC 2916]
gi|226948608|ref|YP_002803699.1| undecaprenyl pyrophosphate synthetase-like protein [Clostridium
botulinum A2 str. Kyoto]
gi|182668961|gb|EDT80937.1| undecaprenyl pyrophosphate synthetase homolog [Clostridium
botulinum NCTC 2916]
gi|226842900|gb|ACO85566.1| undecaprenyl pyrophosphate synthetase homolog [Clostridium
botulinum A2 str. Kyoto]
Length = 215
Score = 171 bits (433), Expect = 9e-41, Method: Composition-based stats.
Identities = 67/232 (28%), Positives = 104/232 (44%), Gaps = 20/232 (8%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P+HIGII DGN RWA +G+ + G++ G+ + VGI +T + F+ +N
Sbjct: 2 RVPNHIGIIPDGNRRWANNKGMEKQCGYKFGLNPGLILFRLCKAVGINEITYYGFTTDNN 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRL--SLDDDILCVLKEAEDQTRL 126
+RP + K + L + + V+GN ++L KE + +
Sbjct: 62 KRPKVQRESFTKACV----EAVEMLCNEDASLLVVGNTESSMFPKELLPYTKERKVFKKG 117
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
G+ + NY ++ N I K++ ++D+ DLII
Sbjct: 118 --GIKVNFLVNYGWEWDLQALENNKLSSRNK------------INKHIKSTDISRVDLII 163
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q YS+F I +YWPDF E + AL Y+ +D GG
Sbjct: 164 RWGGRRRLSGFLPIQSVYSDFYIIEDYWPDFKSEHLYEALEWYDKQDITLGG 215
>gi|148379307|ref|YP_001253848.1| undecaprenyl pyrophosphate synthetase-like protein [Clostridium
botulinum A str. ATCC 3502]
gi|153933992|ref|YP_001383682.1| undecaprenyl pyrophosphate synthetase-like protein [Clostridium
botulinum A str. ATCC 19397]
gi|153935982|ref|YP_001387230.1| undecaprenyl pyrophosphate synthetase-like protein [Clostridium
botulinum A str. Hall]
gi|148288791|emb|CAL82875.1| putative undecaprenyl pyrophosphate synthetase [Clostridium
botulinum A str. ATCC 3502]
gi|152930036|gb|ABS35536.1| undecaprenyl pyrophosphate synthetase homolog [Clostridium
botulinum A str. ATCC 19397]
gi|152931896|gb|ABS37395.1| undecaprenyl pyrophosphate synthetase homolog [Clostridium
botulinum A str. Hall]
Length = 215
Score = 171 bits (433), Expect = 9e-41, Method: Composition-based stats.
Identities = 67/232 (28%), Positives = 104/232 (44%), Gaps = 20/232 (8%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P+HIGII DGN RWA +G+ + G++ G+ + VGI +T + F+ +N
Sbjct: 2 RVPNHIGIIPDGNRRWANNKGMEKQCGYKFGLNPGLILFRLCKAVGINEITYYGFTTDNN 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRL--SLDDDILCVLKEAEDQTRL 126
+RP + K + L + + V+GN ++L KE + +
Sbjct: 62 KRPKVQRQSFTKACV----EAVEMLCNEDASLLVVGNTESSMFPKELLPYTKERKVFKKG 117
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
G+ + NY ++ N I K++ ++D+ DLII
Sbjct: 118 --GIKVNFLVNYGWEWDLQALENNKLSSRNK------------INKHIKSTDISRVDLII 163
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q YS+F I +YWPDF E + AL Y+ +D GG
Sbjct: 164 RWGGRRRLSGFLPIQSVYSDFYIIEDYWPDFKSEHLYEALEWYDKQDITLGG 215
>gi|302874890|ref|YP_003843523.1| Di-trans-poly-cis-decaprenylcistransferase [Clostridium
cellulovorans 743B]
gi|307690493|ref|ZP_07632939.1| Di-trans-poly-cis-decaprenylcistransferase [Clostridium
cellulovorans 743B]
gi|302577747|gb|ADL51759.1| Di-trans-poly-cis-decaprenylcistransferase [Clostridium
cellulovorans 743B]
Length = 213
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 63/232 (27%), Positives = 103/232 (44%), Gaps = 22/232 (9%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HIGII DGN R+A A+G+ + G+ GI+ + + G++ +T + F+ +N
Sbjct: 2 RIPRHIGIIPDGNRRYAVAKGMSKEKGYDLGIDPGLTVFKLCKQYGVEEITFYGFTTDNT 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRL--SLDDDILCVLKEAEDQTRL 126
+RP + K ++ L + + V+GN +++L K
Sbjct: 62 KRPREQRLAYTKACIDAVR----LLTNEDADLLVVGNTESPMFPEELLAFTKRNAF---G 114
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
+ + + NY +++ D I K + ++D+ DLII
Sbjct: 115 SGRIKVNFLVNYGWEWDLNN--LKTLNDGR-----------KNITKNIKSNDISRVDLII 161
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q YS+F + +YWPDF E F A+ Y +D GG
Sbjct: 162 RWGGRRRLSGFLPVQSIYSDFYVVDDYWPDFKAEHFTEAIEWYQSQDVTLGG 213
>gi|255525210|ref|ZP_05392152.1| Di-trans-poly-cis-decaprenylcistransferase [Clostridium
carboxidivorans P7]
gi|296188748|ref|ZP_06857135.1| hypothetical protein CLCAR_4283 [Clostridium carboxidivorans P7]
gi|255511073|gb|EET87371.1| Di-trans-poly-cis-decaprenylcistransferase [Clostridium
carboxidivorans P7]
gi|296046675|gb|EFG86122.1| hypothetical protein CLCAR_4283 [Clostridium carboxidivorans P7]
Length = 210
Score = 170 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 74/232 (31%), Positives = 110/232 (47%), Gaps = 25/232 (10%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P+HIGII DGN RWA GL + AG+ G++ EI E+GIK LT + F+++N
Sbjct: 2 RLPNHIGIIPDGNRRWAVNHGLEKEAGYAWGLQPGMEIFKICKELGIKELTYYGFTVDNT 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRL--SLDDDILCVLKEAEDQTRL 126
+RP + ++ L K + + V+GN ++L K +
Sbjct: 62 KRPKVQTKAFTTACVEAVR----MLSKEDASLLVVGNSSSPMFPRELLPFTKR---KFFG 114
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
+ + NY ++S H++D++ YL +SD+ DLII
Sbjct: 115 KGTMKINFLVNYGWEWDLS---------------PVHNLDNNT-KHYLKSSDINRVDLII 158
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q YS+F I +YWPDF + ALN Y+ +D GG
Sbjct: 159 RWGGRRRLSGFLPVQSVYSDFYIIDDYWPDFKKSQLMDALNWYSTQDVTLGG 210
>gi|170754428|ref|YP_001780961.1| undecaprenyl pyrophosphate synthetase-like protein [Clostridium
botulinum B1 str. Okra]
gi|169119640|gb|ACA43476.1| undecaprenyl pyrophosphate synthetase homolog [Clostridium
botulinum B1 str. Okra]
Length = 215
Score = 170 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 67/232 (28%), Positives = 104/232 (44%), Gaps = 20/232 (8%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P+HIGII DGN RWA +G+ + G++ G+ + VGI +T + F+ +N
Sbjct: 2 RVPNHIGIIPDGNRRWANNKGMEKQCGYKFGLNPGLILFRLCKAVGINEITYYGFTTDNN 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRL--SLDDDILCVLKEAEDQTRL 126
+RP + K + L + + V+GN ++L KE + +
Sbjct: 62 KRPKVQRESFTKACV----EAVEMLCNEDASLLVVGNTESSMFPKELLPYTKERKVFKKG 117
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
G+ + NY ++ N I K++ ++D+ DLII
Sbjct: 118 --GIKVNFLVNYGWEWDLQSLENNKLSSRNK------------INKHIKSTDISRVDLII 163
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q YS+F I +YWPDF E + AL Y+ +D GG
Sbjct: 164 RWGGRRRLSGFLPIQSVYSDFYIIEDYWPDFKSEHLYEALKWYDKQDITLGG 215
>gi|168184150|ref|ZP_02618814.1| undecaprenyl pyrophosphate synthetase homolog [Clostridium
botulinum Bf]
gi|237794682|ref|YP_002862234.1| putative undecaprenyl pyrophosphate synthetase [Clostridium
botulinum Ba4 str. 657]
gi|182672709|gb|EDT84670.1| undecaprenyl pyrophosphate synthetase homolog [Clostridium
botulinum Bf]
gi|229263867|gb|ACQ54900.1| putative undecaprenyl pyrophosphate synthetase [Clostridium
botulinum Ba4 str. 657]
Length = 215
Score = 170 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 67/232 (28%), Positives = 104/232 (44%), Gaps = 20/232 (8%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P+HIGII DGN RWA +G+ + G++ G+ + VGI +T + F+ +N
Sbjct: 2 RVPNHIGIIPDGNRRWANNKGMEKQCGYKFGLNPGLILFRLCKAVGINEITYYGFTTDNN 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRL--SLDDDILCVLKEAEDQTRL 126
+RP + K + L + + V+GN ++L KE + +
Sbjct: 62 KRPKVQRESFTKACV----EAVEMLCNEDASLLVVGNTESSMFPKELLPYTKERKVFKKG 117
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
G+ + NY ++ N I K++ ++D+ DLII
Sbjct: 118 --GIKVNFLVNYGWEWDLQALENNKLSSRNK------------INKHIKSTDISRVDLII 163
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q YS+F I +YWPDF E + AL Y+ +D GG
Sbjct: 164 RWGGRRRLSGFLPIQSVYSDFYIIEDYWPDFKSEHLYEALKWYDKQDITLGG 215
>gi|322699257|gb|EFY91020.1| undecaprenyl diphosphate synthase family protein [Metarhizium
acridum CQMa 102]
Length = 358
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 72/317 (22%), Positives = 120/317 (37%), Gaps = 90/317 (28%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ MDGN R+A + + GH +G E G+K +T+
Sbjct: 29 LIGALRQGPVPQHVAFEMDGNRRYARSHRMETVEGHHRGFEALARC-------GVKVITV 81
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFS+ N+ RP E+ L++L K L++ L + VRV+G R + +D+L V+
Sbjct: 82 YAFSVENYNRPKHEVEGLMQLAKVKLEQLTTYGDILDRYGACVRVLGQREMVREDVLKVV 141
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI------ESGSVCSHDVDSSLIA 171
+A +T+ N L I F Y+SR EI+ AI+N QD ++ + +++
Sbjct: 142 DKAVARTKHNNKTVLNICFPYTSRAEITTAIRNTVQDFLNPPPPKNTPFSPSRIRQKILS 201
Query: 172 KYLDTS--------------------------------------DVPDPDLIIRTGGEKR 193
LD D P P L R+
Sbjct: 202 SQLDGKEPLPTILDADDDDDVVPEETNMDNDEDAGDSSSTTLPPDSPSPSLRTRSSSTNH 261
Query: 194 LSD-----------------------------------FLLWQVAY-SEFVFIPEYWPDF 217
L + F+LWQ ++ VFI WPDF
Sbjct: 262 LPNPESITTDTLNDHMYTAADPPLELFVRTSGVERLSDFMLWQCHQDTQIVFIDCLWPDF 321
Query: 218 SRELFFHALNQYNLRDR 234
+ F + ++ R +
Sbjct: 322 DLQHFIWVMLEWQWRQK 338
>gi|251780875|ref|ZP_04823795.1| undecaprenyl pyrophosphate synthetase [Clostridium botulinum E1
str. 'BoNT E Beluga']
gi|243085190|gb|EES51080.1| undecaprenyl pyrophosphate synthetase [Clostridium botulinum E1
str. 'BoNT E Beluga']
Length = 213
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 71/232 (30%), Positives = 104/232 (44%), Gaps = 22/232 (9%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HIG+I DGN RWA A GL + G+ G+ E+ + GI +T + F+++N
Sbjct: 2 RIPKHIGVIPDGNRRWALANGLTKDKGYSFGVNPGLEVFKLCQKEGISEVTFYGFTVDNT 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS--LDDDILCVLKEAEDQTRL 126
+RP + + + L K N ++ V+GN S ++L K T
Sbjct: 62 KRPSEQKIAFTEACI----ESVKLLTKENCEILVLGNTDSKLFPKELLPFSKRT---TFG 114
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
G+ + NY ++ + +D I Y+ + D+ DLII
Sbjct: 115 AGGIKVNFLMNYGWEWDL-------------NILKENDSSHKGIIPYIHSKDISRIDLII 161
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q YS+F I YWP F F+ ALN YN +D GG
Sbjct: 162 RWGGRRRLSGFLPAQCVYSDFYVIDSYWPAFKTTEFYDALNWYNDQDVTLGG 213
>gi|153939822|ref|YP_001390687.1| undecaprenyl pyrophosphate synthetase-like protein [Clostridium
botulinum F str. Langeland]
gi|152935718|gb|ABS41216.1| undecaprenyl pyrophosphate synthetase homolog [Clostridium
botulinum F str. Langeland]
gi|295318761|gb|ADF99138.1| undecaprenyl pyrophosphate synthetase-like protein [Clostridium
botulinum F str. 230613]
Length = 215
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 67/232 (28%), Positives = 105/232 (45%), Gaps = 20/232 (8%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P+HIGII DGN RWA +G+ + G++ G+ + VGI +T + F+ +N
Sbjct: 2 RVPNHIGIIPDGNRRWANNKGMEKQCGYKFGLNPGLILFRLCKAVGINEITYYGFTTDNN 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRL--SLDDDILCVLKEAEDQTRL 126
+RP + K + L + + V+GN +++L KE + +
Sbjct: 62 KRPKVQRESFTKACV----EAVEMLCNEDASLLVVGNTESSMFPNELLPYTKERKVFKKG 117
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
G+ + NY ++ N I K++ ++D+ DLII
Sbjct: 118 --GIKVNFLVNYGWEWDLQSLENNKLSSRNK------------INKHIKSTDISRVDLII 163
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q YS+F I +YWPDF E + AL Y+ +D GG
Sbjct: 164 RWGGRRRLSGFLPIQSVYSDFYIIEDYWPDFKSEHLYEALEWYDKQDITLGG 215
>gi|187780037|ref|ZP_02996510.1| hypothetical protein CLOSPO_03633 [Clostridium sporogenes ATCC
15579]
gi|187773662|gb|EDU37464.1| hypothetical protein CLOSPO_03633 [Clostridium sporogenes ATCC
15579]
Length = 215
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 20/232 (8%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P+HIGII DGN RWA +G+ + G+ G+ + GI +T + F+ +N
Sbjct: 2 RVPNHIGIIPDGNRRWANNKGMEKQCGYDFGLNPGLMLFRLCRAAGINEITYYGFTTDNT 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRL--SLDDDILCVLKEAEDQTRL 126
+RP + K + L + + V+GN ++L K+ +
Sbjct: 62 KRPKVQRESFTKACI----EAVEMLCNEDASLLVVGNTESPMFPKELLPYTKKRKVFKEG 117
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
+N + + + E ++ + I K++ ++D+ DLII
Sbjct: 118 GIKVNFLVNYGWEWDLEALE--------------NNNLSSRNKINKHIKSTDISRVDLII 163
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q YS+F I +YWPDF E F+ AL Y+ +D GG
Sbjct: 164 RWGGRRRLSGFLPIQSVYSDFYIIEDYWPDFKPEHFYGALKWYDEQDITLGG 215
>gi|309804276|ref|ZP_07698353.1| putative di-trans,poly-cis-decaprenylcistransferase [Lactobacillus
iners LactinV 11V1-d]
gi|308163679|gb|EFO65949.1| putative di-trans,poly-cis-decaprenylcistransferase [Lactobacillus
iners LactinV 11V1-d]
Length = 161
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 69/147 (46%), Positives = 90/147 (61%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA R LPR GHR G+ EI A E+G+K LT++AFS NW RP
Sbjct: 10 HLAIIMDGNGRWAQERHLPRIIGHRSGMNKVKEIALVANELGVKVLTLYAFSTENWGRPR 69
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
E++ L+KL +F K L+KNNIKV ++G L ++K+AE +T N G+ L
Sbjct: 70 DEVNYLMKLPINFFDKFMPELQKNNIKVNIMGFNDKLPLATAEIIKKAEQETADNDGMIL 129
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGS 159
AFNY SR EI+ AI I DI++
Sbjct: 130 NFAFNYGSRQEITAAISKIALDIQNKK 156
>gi|150016164|ref|YP_001308418.1| di-trans-poly-cis-decaprenylcistransferase [Clostridium
beijerinckii NCIMB 8052]
gi|149902629|gb|ABR33462.1| Di-trans-poly-cis-decaprenylcistransferase [Clostridium
beijerinckii NCIMB 8052]
Length = 213
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 68/232 (29%), Positives = 105/232 (45%), Gaps = 22/232 (9%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HIGII DGN RWA + L + G+ GI E+ + I+ +T + F+I+N
Sbjct: 2 RIPKHIGIIPDGNRRWALSNSLGKDKGYDHGINPGLEVFKLCQKENIQEVTFYGFTIDNT 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRL--SLDDDILCVLKEAEDQTRL 126
+RP + K L K + ++ V+GN ++L K +
Sbjct: 62 KRPSDQKIAFTKACIDS----VMLLTKEDCEILVLGNTESSCFPKELLPFTKRKKF---G 114
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
+ G+ NY ++ + + D+ I +L + D+ DLII
Sbjct: 115 SGGIKANFLINYGWEWDL-------------NLLKNADISKKHIQPHLQSKDISRIDLII 161
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS L Q YS+F + YWPDF +E F++AL+ YN +D GG
Sbjct: 162 RWGGRRRLSGLLPVQSVYSDFYILDNYWPDFKKEDFYNALSWYNEQDVTLGG 213
>gi|254518216|ref|ZP_05130272.1| di-trans-poly-cis-decaprenylcistransferase [Clostridium sp.
7_2_43FAA]
gi|226911965|gb|EEH97166.1| di-trans-poly-cis-decaprenylcistransferase [Clostridium sp.
7_2_43FAA]
Length = 213
Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 69/232 (29%), Positives = 104/232 (44%), Gaps = 22/232 (9%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P+HIGII DGN RWA + L + G+ GI E+ + IK +T + F+I+N
Sbjct: 2 RIPEHIGIIPDGNRRWALSNNLSKDKGYSHGINPGLEVFKLCQKENIKEVTFYGFTIDNT 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNR--LSLDDDILCVLKEAEDQTRL 126
+RP + ++ L K + ++ VIGN ++ + Q
Sbjct: 62 KRPSEQKKAFIRACIDS----VMLLTKEDCEILVIGNTESDVFPQELPPFITR---QKFG 114
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N G+ + +Y ++ + D I + + D+ DLII
Sbjct: 115 NGGIKVNFLIHYGWEWDL-------------NLLKESDSSKKHILPCIHSEDISRIDLII 161
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q YS+F I YWPDF+ + F+ ALN YN +D GG
Sbjct: 162 RWGGRRRLSGFLPVQSVYSDFYVIDTYWPDFNSQDFYSALNWYNDQDITLGG 213
>gi|210616165|ref|ZP_03290968.1| hypothetical protein CLONEX_03187 [Clostridium nexile DSM 1787]
gi|210149927|gb|EEA80936.1| hypothetical protein CLONEX_03187 [Clostridium nexile DSM 1787]
Length = 224
Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 56/232 (24%), Positives = 103/232 (44%), Gaps = 20/232 (8%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HI II DGN RWA + + G++ G+ E++ A E G+ +T + F+++N
Sbjct: 11 RIPKHIAIIPDGNRRWATQHQMEKKDGYQHGLNPGLEVLRKAKEYGVAEITYYGFTVDNC 70
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRL--SLDDDILCVLKEAEDQTRL 126
+RP + + K ++ K+ N+ + V+G+ +++L + E
Sbjct: 71 KRPKVQQNAFKKACVDAVR---LIQKEGNVSLLVVGDSSSVHFPEELLKYTQRKEIGIAD 127
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
+ + NY ++S AI+ + + + + + D+ DL+I
Sbjct: 128 ---IKVNFLVNYGWEWDLS-AIRKEGMEQ-----------ENDVMTQIHSKDISRIDLVI 172
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R G +RLS L Q Y++F + WPD+ F A+ Y+ +D GG
Sbjct: 173 RWGNMRRLSGMLPVQSVYADFYVVENLWPDYKERDFDKAIRWYDKQDVTLGG 224
>gi|328958240|ref|YP_004375626.1| undecaprenyl pyrophosphate synthase [Carnobacterium sp. 17-4]
gi|328674564|gb|AEB30610.1| undecaprenyl pyrophosphate synthase [Carnobacterium sp. 17-4]
Length = 219
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 71/231 (30%), Positives = 106/231 (45%), Gaps = 20/231 (8%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HIGII DGN RWA G + G++ GIE E+ E+GI+ +T + F+++N +
Sbjct: 7 LPKHIGIIPDGNRRWAQENGFKKQEGYKFGIEPGLELYHLCLELGIEEMTFYGFTVDNTK 66
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS--LDDDILCVLKEAEDQTRLN 127
RP + K + K LK + + V+GN S ++L K +
Sbjct: 67 RPAEQTKAFQKACVDAVNK----LKDRDADLLVVGNTNSPLFPKELLPYTKRTKF---GK 119
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+ + NY +++ IK D + S ++ SS I++ DLIIR
Sbjct: 120 GLMKINFLVNYGWNWDLNYGIKQNDFDPKQDSTK--NIASSDISRM---------DLIIR 168
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GG +RLS FL Q YS+F E WPD++ AL Y +D GG
Sbjct: 169 WGGRRRLSGFLPIQSIYSDFYVAEEMWPDYNLNQVHAALQWYQDQDITLGG 219
>gi|170759900|ref|YP_001786718.1| undecaprenyl pyrophosphate synthetase-like protein [Clostridium
botulinum A3 str. Loch Maree]
gi|169406889|gb|ACA55300.1| undecaprenyl pyrophosphate synthetase homolog [Clostridium
botulinum A3 str. Loch Maree]
Length = 215
Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats.
Identities = 67/232 (28%), Positives = 103/232 (44%), Gaps = 20/232 (8%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P+HIGII DGN RWA +G+ + G++ G+ + VGI +T + F+ +N
Sbjct: 2 RVPNHIGIIPDGNRRWANNKGMEKQCGYKFGLNPGLILFRLCKVVGINEITYYGFTTDNN 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRL--SLDDDILCVLKEAEDQTRL 126
+RP + K + L + + V+GN ++L KE +
Sbjct: 62 KRPKVQRESFTKACV----EAVEMLCNEDASLLVVGNTESPMFPKELLPYTKERKVFKEG 117
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
G+ + NY ++ N I K++ ++D+ DLII
Sbjct: 118 --GIKVNFLVNYGWEWDLQALENNKLSSRNK------------INKHIKSTDISRVDLII 163
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q YS+F I +YWPDF E + AL Y+ +D GG
Sbjct: 164 RWGGRRRLSGFLPIQSVYSDFYIIEDYWPDFKSEHLYEALKWYDKQDITLGG 215
>gi|307824399|ref|ZP_07654624.1| Di-trans-poly-cis-decaprenylcistransferase [Methylobacter
tundripaludum SV96]
gi|307734383|gb|EFO05235.1| Di-trans-poly-cis-decaprenylcistransferase [Methylobacter
tundripaludum SV96]
Length = 204
Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats.
Identities = 64/236 (27%), Positives = 99/236 (41%), Gaps = 34/236 (14%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
M ++ P H+G I DGN RWA GLP+ G+ GI + E GIK +I+ F+
Sbjct: 1 MAKNNIPRHVGFIPDGNRRWAIDHGLPKETGYAHGINPGFLLYELCKEYGIKEASIYCFT 60
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNR--LSLDDDILCVLKEAED 122
+N +RP + + +F + + + V+G+ +++ +
Sbjct: 61 QDNTKRPSIQKQAFSEASVAF----ALEIARRGAALLVVGDETSTQFPKELIKFRQR--- 113
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
G+ + + NY ++ L L + DV
Sbjct: 114 ---QGDGIKVNLLVNYGWEWDLVG----------------------LKNGGLRSEDVSRL 148
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DLIIR GG +RLS FL Q Y++F EYWPDF + F AL Y +D+ GG
Sbjct: 149 DLIIRWGGGRRLSGFLPVQSVYADFYVRDEYWPDFDPQHFEQALAWYKKQDQTLGG 204
>gi|294671223|ref|ZP_06736076.1| hypothetical protein NEIELOOT_02933 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307051|gb|EFE48294.1| hypothetical protein NEIELOOT_02933 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 152
Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 56/150 (37%), Positives = 90/150 (60%), Gaps = 6/150 (4%)
Query: 93 LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIF 152
+ ++N++++VIG+R + +I+ ++ AE T N+GL L IA +Y R +I +A+ +
Sbjct: 1 MHEHNMRLKVIGDRSRFNAEIVAGIEAAESLTAGNSGLTLTIAADYGGRWDILQAVNKLL 60
Query: 153 QDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPE 212
+ ++ S + L DVP+PDL IRTGGE R+S+FLLWQ+AY+E F
Sbjct: 61 AAGKK------EITESDLNAGLMLGDVPEPDLFIRTGGEMRISNFLLWQMAYAELYFTDT 114
Query: 213 YWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
WPDF + F A+ + R+RRFG S++
Sbjct: 115 LWPDFDSQAFQTAIASFQQRERRFGRTSEQ 144
>gi|226322654|ref|ZP_03798172.1| hypothetical protein COPCOM_00426 [Coprococcus comes ATCC 27758]
gi|225208991|gb|EEG91345.1| hypothetical protein COPCOM_00426 [Coprococcus comes ATCC 27758]
Length = 143
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 67/142 (47%), Positives = 100/142 (70%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
+ P HI II+DGNGRWA A+G+PR GH +G + +I AA ++G+K LT++AFS NW
Sbjct: 2 NVPQHIAIILDGNGRWAKAKGMPRNYGHVQGSKNVEKICEAAYKMGVKYLTVYAFSTENW 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
RP SE+ L+KL+++++K + +KN ++VRVIG++ LD+DI +KE E+ ++ N
Sbjct: 62 SRPKSEVDALMKLLRNYMKTCLKTAEKNRMRVRVIGDKTGLDEDIRTRIKELEEASKNND 121
Query: 129 GLNLFIAFNYSSRDEISRAIKN 150
GLN IA NY SRDE+ RA++
Sbjct: 122 GLNFQIAINYGSRDEMIRAMRK 143
>gi|331092449|ref|ZP_08341274.1| hypothetical protein HMPREF9477_01917 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330401292|gb|EGG80881.1| hypothetical protein HMPREF9477_01917 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 206
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 96/232 (41%), Gaps = 29/232 (12%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HI II DGN RWA L + G++KG++ +++ A E GI +T + F+ +N
Sbjct: 2 RIPKHIAIIPDGNRRWAVQHKLEKKDGYQKGLDPGVQVLRKAKEYGISEITYYGFTTDNC 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNR--LSLDDDILCVLKEAEDQTRL 126
+RP + K L+ N+ + V+GN + +++ E
Sbjct: 62 KRPTEQKEAFKKACVDALRLIKEE---GNVSLLVLGNAESENFPKELIQYTTRQEI---G 115
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N + + NY ++S + ++ DL+I
Sbjct: 116 NPEIKVNFLVNYGWDWDLSGIAHRKDA---------------------YSKEISRIDLVI 154
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R G +RLS L Q Y++F + + WPDF F A++ Y+ +D GG
Sbjct: 155 RWGNMRRLSGMLPIQSVYADFYVVEDLWPDFDERDFDAAISWYDKQDITLGG 206
>gi|321399160|emb|CAM66404.2| cis-prenyltransferase-like protein [Leishmania infantum JPCM5]
Length = 391
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 77/303 (25%), Positives = 122/303 (40%), Gaps = 76/303 (25%)
Query: 12 DHIGIIMDGNGRWAAAR------------------------------------------- 28
H+GIIMDGN R+
Sbjct: 89 RHLGIIMDGNRRYGRRHSTAARCPDPSALREIREELCSATELTATHSATEQSCWLAARYK 148
Query: 29 ------GLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLI 82
GHR G E E++ + E GI +T++AFS +NW RP +E+ L+ L
Sbjct: 149 RFASVIQHSSLDGHRVGGEKLLEVIKHSMEAGIDMVTVYAFSTDNWNRPAAEVDALMSLF 208
Query: 83 KSFLKKGFYSLKKNNIKVRVIGN-RLSLDDDILCVLKEAEDQTRLNT--GLNLFIAFNYS 139
F + + +I VR I L + ++ E +TR L L I +YS
Sbjct: 209 FFFFDRIRKEALERHIFVRFISTELFRLPPRAVEFMRSVERETRAVQPRRLVLNICVSYS 268
Query: 140 SRDEISRAIKNIFQDIESGSVCS------------HDVDSSLIAK-----------YLDT 176
+ E+ A + S ++D ++ +L
Sbjct: 269 GQSEVVAACNRLVARRLRDSTDPASAAAVATEVTKKELDREMLRSITQDEHEAEDAHLFG 328
Query: 177 SDVP-DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
DV +P+LI+RT GE+R+S+FLL++ AYSEFVF+ + WP+ ++E AL+ + R++R
Sbjct: 329 GDVSVEPELILRTSGEQRISNFLLYECAYSEFVFLDKAWPEVTQEDIRQALSDFTRREKR 388
Query: 236 FGG 238
G
Sbjct: 389 KGR 391
>gi|182416900|ref|ZP_02948284.1| undecaprenyl pyrophosphate synthetase [Clostridium butyricum 5521]
gi|237667680|ref|ZP_04527664.1| Di-trans-poly-cis-decaprenylcistransferase [Clostridium butyricum
E4 str. BoNT E BL5262]
gi|182379198|gb|EDT76699.1| undecaprenyl pyrophosphate synthetase [Clostridium butyricum 5521]
gi|237656028|gb|EEP53584.1| Di-trans-poly-cis-decaprenylcistransferase [Clostridium butyricum
E4 str. BoNT E BL5262]
Length = 213
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 65/232 (28%), Positives = 105/232 (45%), Gaps = 22/232 (9%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HIGII DGN RWA + + + G+ GI+ ++ + ++ +T + F+++N
Sbjct: 2 RVPKHIGIIPDGNRRWALSNDMTKDMGYSYGIDPGLQVFKLCQKEKVEEVTFYGFTVDNT 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNR--LSLDDDILCVLKEAEDQTRL 126
+RP + K + L K N ++ V+GN ++L +
Sbjct: 62 KRPSDQKEAFTKACI----ESVELLTKENCEILVLGNTNSSCFPKELLQYTERKVF---G 114
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
+ G+ + NY ++ + + + S I YL + D+ DLII
Sbjct: 115 SGGIKVNFLINYGWEWDL-------------NLLKNPALSKSGIIPYLHSKDISRIDLII 161
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q YS+F I YWP F E F+ AL+ Y+ +D GG
Sbjct: 162 RWGGRRRLSGFLPAQSVYSDFYIINNYWPSFKEEDFYGALSWYDKQDVTLGG 213
>gi|322497428|emb|CBZ32502.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 391
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 77/303 (25%), Positives = 122/303 (40%), Gaps = 76/303 (25%)
Query: 12 DHIGIIMDGNGRWAAAR------------------------------------------- 28
H+GIIMDGN R+
Sbjct: 89 RHLGIIMDGNRRYGRRHSTAARCPDPSALREIREELCSATELTATHSATEQSCWLAARYK 148
Query: 29 ------GLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLI 82
GHR G E E++ + E GI +T++AFS +NW RP +E+ L+ L
Sbjct: 149 RFASVIQHSSLDGHRVGGEKLLEVIKHSMEAGIDMVTVYAFSTDNWNRPAAEVDALMSLF 208
Query: 83 KSFLKKGFYSLKKNNIKVRVIGN-RLSLDDDILCVLKEAEDQTRLNT--GLNLFIAFNYS 139
F + + +I VR I L + ++ E +TR L L I +YS
Sbjct: 209 FFFFDRIRKEALERHIFVRFISTELFRLPPRAVEFMRSVERETRAVQPRRLVLNICVSYS 268
Query: 140 SRDEISRAIKNIFQDIESGSVCS------------HDVDSSLIAK-----------YLDT 176
+ E+ A + S ++D ++ +L
Sbjct: 269 GQSEVVAACNRLVARRLRDSTDPASAAAVATEVTKKELDREMLRSITQDEHEAEDAHLFG 328
Query: 177 SDVP-DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
DV +P+LI+RT GE+R+S+FLL++ AYSEFVF+ + WP+ ++E AL+ + R++R
Sbjct: 329 GDVSVEPELILRTSGEQRISNFLLYECAYSEFVFLDKAWPEVTQEDIRQALSDFTRREKR 388
Query: 236 FGG 238
G
Sbjct: 389 KGR 391
>gi|116200041|ref|XP_001225832.1| hypothetical protein CHGG_08176 [Chaetomium globosum CBS 148.51]
gi|88179455|gb|EAQ86923.1| hypothetical protein CHGG_08176 [Chaetomium globosum CBS 148.51]
Length = 1204
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 12/196 (6%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ MDGN R+A + + GH G E ++ + G+K +T+
Sbjct: 30 LIGALSQGPIPQHVAFEMDGNRRYARSHKIETIEGHHLGFEALARVLEVCYKCGVKVVTV 89
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFS+ N+ RP E+ L++L K L++ L + +V+V+G + D+L V+
Sbjct: 90 YAFSLENFHRPKYEVDGLMQLAKLKLEQLIQHGELLDRYGARVKVLGRLDLIPPDVLEVV 149
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI------ESGSVCSHDVDSSLIA 171
+ A T+ NT L I F Y+SR+E++ AI+ Q+ S + +++
Sbjct: 150 ERAAATTKNNTDCVLNICFPYTSREEMTTAIRTTVQEYSTTPRPHSTPFSQSRITQKILS 209
Query: 172 KYLDTSDVPDPDLIIR 187
K + PDP IR
Sbjct: 210 KQ---AGKPDPLEPIR 222
Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 160 VCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVA-YSEFVFIPEYWPDFS 218
+ + I ++ T+ P D+ +RT G +RLSDF+LWQ + F+ +WP+F
Sbjct: 267 PNAETITPETIDSHMYTAGCPPLDIFVRTSGVERLSDFMLWQCHQNTHIFFLKCFWPEFD 326
Query: 219 RELFF 223
F
Sbjct: 327 LWSFL 331
>gi|330975397|gb|EGH75463.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 150
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 55/147 (37%), Positives = 87/147 (59%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + SS P H+ IIMDGN RWA R LP AGH+ G++ ++ AE ++ LT+F
Sbjct: 4 IKPAVPSSVPRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAEARVEVLTLF 63
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
AFS NW+RP E+ L++L + L++ L +N I +R+IG+R ++ ++EAE
Sbjct: 64 AFSSENWQRPAEEVGALMELFFTALRRETKRLNENEISLRIIGDRSRFHPELQAAMREAE 123
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAI 148
+T N+ L IA NY + +I++A
Sbjct: 124 VRTSGNSRFVLQIAANYGGQWDIAQAA 150
>gi|218661291|ref|ZP_03517221.1| undecaprenyl pyrophosphate synthetase protein [Rhizobium etli
IE4771]
Length = 214
Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats.
Identities = 91/211 (43%), Positives = 130/211 (61%), Gaps = 10/211 (4%)
Query: 38 KGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNN 97
KG+E E V AA GIK LT+FAFS NWRRP +E+S+L+ L+K+F+++ L + N
Sbjct: 1 KGVEAVRETVRAAGAAGIKYLTLFAFSSENWRRPEAEVSDLLGLLKAFIRRDLAELHRQN 60
Query: 98 IKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIES 157
+++RVIG+R SL DIL +L EAE+ T+ NT L L IAFNY SRDEISRA+ ++ +D+E+
Sbjct: 61 VRIRVIGDRHSLRSDILGLLLEAEETTKDNTALTLVIAFNYGSRDEISRAVVSLAKDVEA 120
Query: 158 GSVCSHDVDSSLIAKYLDTSDVP-----DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPE 212
G + + D+ +LI LDT P PD R G + S + + S F+PE
Sbjct: 121 GRLRAQDITPALIDARLDTGGHPRSGSHHPDQ--RRGAAFQFSCWGRPPIRNS--FFVPE 176
Query: 213 YWPDFSR-ELFFHALNQYNLRDRRFGGLSKK 242
YW F + F AL ++ RD+RFG ++
Sbjct: 177 YWAGFQPGKSFRSALEKFASRDKRFGRACRR 207
>gi|221053366|ref|XP_002258057.1| dehydrodolichyl diphosphate synthetase [Plasmodium knowlesi strain
H]
gi|193807890|emb|CAQ38594.1| dehydrodolichyl diphosphate synthetase,putative [Plasmodium
knowlesi strain H]
Length = 314
Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats.
Identities = 78/276 (28%), Positives = 121/276 (43%), Gaps = 58/276 (21%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
HI IIMDGN R+A +GL GH G + +I+ + IK L++F+ S+ N+ R
Sbjct: 21 KHISIIMDGNRRFAKEKGLHSSLGHYMGSKALIQIIEICVRLKIKVLSVFSLSLLNYNRS 80
Query: 72 VSEISELVKLIKSFLKKG---FYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
EI L L L ++ N I+++VIGN +++ ++ + E +T
Sbjct: 81 PEEIHFLFYLNLLILINEDFFMNFIRDNKIRIKVIGNLSYINEAYRKIIHDIEQKTEQFD 140
Query: 129 GLNLFIAFNYSSRDEISRAIKNIF-------------------------------QDIES 157
L L I F+Y+SR+E+S N D
Sbjct: 141 NLLLNIFFSYTSRNEMSLCKFNPNLYFNTYKSLLEERKVLCTSSSTLANQDDSDECDYLE 200
Query: 158 GSVCSHDVDSS-----------------------LIAKYLDTSDVPDPDLIIRTGGEKRL 194
+ + +D K L TSD+P P+++IRT GEKRL
Sbjct: 201 RILKNERIDLDQMFEVDCICGGKSFLNREQIKIVNYHKKLLTSDLPPPNILIRTSGEKRL 260
Query: 195 SDFLLWQVA-YSEFVFIPEYWPDFSRELFFHALNQY 229
SDF+L+Q++ ++E FI EYWP F+ F + + Y
Sbjct: 261 SDFMLYQISEFTEIYFINEYWPIFNFLQFIYVILHY 296
>gi|71662517|ref|XP_818264.1| cis-prenyltransferase [Trypanosoma cruzi strain CL Brener]
gi|70883505|gb|EAN96413.1| cis-prenyltransferase, putative [Trypanosoma cruzi]
Length = 414
Score = 164 bits (416), Expect = 7e-39, Method: Composition-based stats.
Identities = 67/281 (23%), Positives = 119/281 (42%), Gaps = 54/281 (19%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCA------------------------------------- 34
H+ +IMDGN R+ L +
Sbjct: 134 RHLAVIMDGNRRFGELTSLSTVSVDAVTKLCDSILEEKNPPESSVERCSALVSLLRHTTL 193
Query: 35 -GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSL 93
GHR G E E + E I+ LT++AFS NW R E++ L+ L F ++ S
Sbjct: 194 DGHRCGGEKLIEFIDNCLEFNIQMLTVYAFSTENWERSALEVNVLMALFYFFFERVRSSA 253
Query: 94 KKNNIKVRVIGNR-LSLDDDILCVLKEAEDQTRLNT--GLNLFIAFNYSSRDEISRAIKN 150
++ I +R I + + ++ E+++R + + + + +YS R+E+ A
Sbjct: 254 REKGIFIRFISPAFERIPISLRKLMLLVEEESRGHRPRRIVVNVCVSYSGREEVLEACNR 313
Query: 151 IFQD-IESGSVCSHDVDSSLIAKY------------LDTSDVPDPDLIIRTGGEKRLSDF 197
+ + +S + + + S ++ L +P +++RT GE+RLS+F
Sbjct: 314 LLRRVDKSIPISNAEFMSHMLRSITQEGHEAEDATVLADGGGAEPQVLLRTSGEQRLSNF 373
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+L++ AY+EF F + WP+ RE F L ++ R RR G
Sbjct: 374 MLYECAYTEFFFTKKTWPEIGREDFIRLLCDFSQRGRRHGR 414
>gi|322825454|gb|EFZ30404.1| cis-prenyltransferase, putative [Trypanosoma cruzi]
Length = 414
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 67/281 (23%), Positives = 119/281 (42%), Gaps = 54/281 (19%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCA------------------------------------- 34
H+ +IMDGN R+ L +
Sbjct: 134 RHLAVIMDGNRRFGELTSLSTVSVDAVTKLCDSILEEKNPPGSSVERCSALVSLLRHTTL 193
Query: 35 -GHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSL 93
GHR G E E + E I+ LT++AFS NW R E++ L+ L F ++ S
Sbjct: 194 DGHRCGGEKLIEFIDNCLEFNIQMLTVYAFSTENWERSALEVNVLMALFYFFFERVRSSA 253
Query: 94 KKNNIKVRVIGNR-LSLDDDILCVLKEAEDQTRLNT--GLNLFIAFNYSSRDEISRAIKN 150
++ I +R I + + ++ E+++R + + + + +YS R+E+ A
Sbjct: 254 REKGIFIRFISPAFERIPISLRKLMLLVEEESRGHRPRRIVVNVCVSYSGREEVLEACNR 313
Query: 151 IFQD-IESGSVCSHDVDSSLIAKY------------LDTSDVPDPDLIIRTGGEKRLSDF 197
+ + +S + + + S ++ L +P +++RT GE+RLS+F
Sbjct: 314 LLRRVDKSIPISNAEFMSHMLRSITQEGHEAEDATVLADGGGAEPQVLLRTSGEQRLSNF 373
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+L++ AY+EF F + WP+ RE F L ++ R RR G
Sbjct: 374 MLYECAYTEFFFTKKTWPEIGREDFIRLLCDFSQRGRRQGR 414
>gi|126700378|ref|YP_001089275.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile 630]
gi|254976356|ref|ZP_05272828.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile
QCD-66c26]
gi|255093741|ref|ZP_05323219.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile CIP
107932]
gi|255101932|ref|ZP_05330909.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile
QCD-63q42]
gi|255307801|ref|ZP_05351972.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile ATCC
43255]
gi|255315493|ref|ZP_05357076.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile
QCD-76w55]
gi|255518156|ref|ZP_05385832.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile
QCD-97b34]
gi|255651272|ref|ZP_05398174.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile
QCD-37x79]
gi|255656746|ref|ZP_05402155.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile
QCD-23m63]
gi|260684336|ref|YP_003215621.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile CD196]
gi|260687995|ref|YP_003219129.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile
R20291]
gi|296452425|ref|ZP_06894126.1| possible Di-trans,poly-cis-decaprenylcistransferase [Clostridium
difficile NAP08]
gi|296877774|ref|ZP_06901800.1| possible Di-trans,poly-cis-decaprenylcistransferase [Clostridium
difficile NAP07]
gi|306521111|ref|ZP_07407458.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile
QCD-32g58]
gi|115251815|emb|CAJ69650.1| putative undecaprenyl pyrophosphate synthetase [Clostridium
difficile]
gi|260210499|emb|CBA64992.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile CD196]
gi|260214012|emb|CBE06141.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile
R20291]
gi|296258755|gb|EFH05649.1| possible Di-trans,poly-cis-decaprenylcistransferase [Clostridium
difficile NAP08]
gi|296431225|gb|EFH17046.1| possible Di-trans,poly-cis-decaprenylcistransferase [Clostridium
difficile NAP07]
Length = 214
Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 61/232 (26%), Positives = 98/232 (42%), Gaps = 21/232 (9%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+GII DGN RWA+ G+ + G+ GI+ E ++G + +T + F+ +N
Sbjct: 2 RIPKHVGIIPDGNRRWASQNGMTKDKGYESGIDPGLESYRLCRDLGCEEVTFYGFTTDNT 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNR--LSLDDDILCVLKEAEDQTRL 126
RRP + K + V+GN +++L +
Sbjct: 62 RRPSVQTKAFTKACIDAANILIDE----GAALLVVGNTKSPMFPEELLPYTNRIK---AK 114
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
+ + NY +++ +V+ + I Y+ + DV DLII
Sbjct: 115 EGQIKANLLVNYGWYWDLNNISG------------VENVNKNNIQDYIQSFDVSRLDLII 162
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG +RLS FL Q Y++F I YWPDF + A + Y+ +D GG
Sbjct: 163 RWGGRRRLSGFLPVQSIYADFYVIDNYWPDFKSDDIKDAFSWYDTQDVTLGG 214
>gi|207342321|gb|EDZ70113.1| YMR101Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 268
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 65/232 (28%), Positives = 111/232 (47%), Gaps = 18/232 (7%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGN R+A +R LP GH G ++ +G+K ++ +AFSI N+ RP E+
Sbjct: 1 MDGNRRYAKSRRLPVKKGHEAGGLTLLTLLYICKRLGVKCVSAYAFSIENFNRPKEEVDT 60
Query: 78 LVKLIKSFLKKGFYSLKK-----NNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNL 132
L+ L L + K K+R++G++ L ++ +K+ E+ T+ L
Sbjct: 61 LMNLFTVKLDEFAKRAKDYKDPLYGSKIRIVGDQSLLSPEMRKKIKKVEEITQDGDDFTL 120
Query: 133 FIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS-DVPDPDLIIRTGGE 191
FI F Y+SR+++ I++ +D S ++ + +L+IRT G
Sbjct: 121 FICFPYTSRNDMLHTIRDSVEDH--LENKSPRINIRKFTNKMYMGFHSNKCELLIRTSGH 178
Query: 192 KRLSDFLLWQVA-YSEFVFIPEYWPDFS---------RELFFHALNQYNLRD 233
+RLSD++LWQV + F WP+FS + FF + +YN ++
Sbjct: 179 RRLSDYMLWQVHENATIEFSDTLWPNFSFFAMYLMILKWSFFSTIQKYNEKN 230
>gi|146080559|ref|XP_001464029.1| cis-prenyltransferase-like protein [Leishmania infantum JPCM5]
Length = 391
Score = 162 bits (411), Expect = 3e-38, Method: Composition-based stats.
Identities = 76/303 (25%), Positives = 121/303 (39%), Gaps = 76/303 (25%)
Query: 12 DHIGIIMDGNGRWAAAR------------------------------------------- 28
H+GIIMDGN R+
Sbjct: 89 RHLGIIMDGNRRYGRRHSTAARCPDPSALREIREELCSATELTATHSATEQSCWLAARYK 148
Query: 29 ------GLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLI 82
GHR G E E++ + E GI +T++AFS +NW RP +E+ L+ L
Sbjct: 149 RFASVIQHSSLDGHRVGGEKLLEVIKHSMEAGIDMVTVYAFSTDNWNRPAAEVDALMSLF 208
Query: 83 KSFLKKGFYSLKKNNIKVRVIGN-RLSLDDDILCVLKEAEDQTRLNT--GLNLFIAFNYS 139
F + + +I VR I L + ++ E +TR L L +YS
Sbjct: 209 FFFFDRIRKEALERHIFVRFISTELFRLPPRAVEFMRSVERETRAVQPRRLVLNFWVSYS 268
Query: 140 SRDEISRAIKNIFQDIESGSVCS------------HDVDSSLIAK-----------YLDT 176
+ E+ A + S ++D ++ +L
Sbjct: 269 GQSEVVAACNRLVARRLRDSTDPASAAAVATEVTKKELDREMLRSITQDEHEAEDAHLFG 328
Query: 177 SDVP-DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
DV +P+LI+RT GE+R+S+FLL++ AYSEFVF+ + WP+ ++E AL+ + R++R
Sbjct: 329 GDVSVEPELILRTSGEQRISNFLLYECAYSEFVFLDKAWPEVTQEDIRQALSDFTRREKR 388
Query: 236 FGG 238
G
Sbjct: 389 KGR 391
>gi|56206246|emb|CAI21498.1| dehydrodolichyl diphosphate synthase [Homo sapiens]
Length = 209
Score = 162 bits (411), Expect = 3e-38, Method: Composition-based stats.
Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 3/161 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P HI IMDGN R+A + R GH +G E + +GI +T++AFS
Sbjct: 20 IKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSF---LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I N++R SE+ L+ L + L + L+K+ + +RV+G+ L D+ ++ +A
Sbjct: 80 IENFKRSKSEVDGLMDLARQKFSRLMEEKEKLQKHGVCIRVLGDLHLLPLDLQELIAQAV 139
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCS 162
T+ L + F Y+SR EIS A++ + +E G +
Sbjct: 140 QATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDP 180
>gi|1262287|gb|AAA96784.1| ORF1; open reading frame in cdsA 5' region; hypothetical protein
[Brucella abortus]
Length = 153
Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats.
Identities = 67/131 (51%), Positives = 90/131 (68%)
Query: 113 ILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAK 172
I +L EAE T NTGLNL IAFNY SRDEI RA++++ +D+ +G + + + L++
Sbjct: 5 IRALLNEAESLTHRNTGLNLVIAFNYGSRDEIVRAVRSLARDVAAGLLDPSSISAELVSA 64
Query: 173 YLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLR 232
LDT+ +PDPDLIIRT GE RLS+FLLWQ AYSEF+F+P +WPDF A + R
Sbjct: 65 NLDTAGIPDPDLIIRTSGEMRLSNFLLWQAAYSEFLFLPCHWPDFRPADLDAAYETFRQR 124
Query: 233 DRRFGGLSKKG 243
+RRFGG+ +
Sbjct: 125 ERRFGGVEPRA 135
>gi|309807204|ref|ZP_07701178.1| di-trans,poly-cis-decaprenylcistransferase-like protein
[Lactobacillus iners LactinV 03V1-b]
gi|308166425|gb|EFO68630.1| di-trans,poly-cis-decaprenylcistransferase-like protein
[Lactobacillus iners LactinV 03V1-b]
Length = 140
Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats.
Identities = 62/140 (44%), Positives = 87/140 (62%), Gaps = 3/140 (2%)
Query: 103 IGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCS 162
+G L ++K+AE +T N G+ L AFNY SR EI+ AI I DI++ +
Sbjct: 1 MGFNDKLPLATAEIIKKAEQETADNDGMILNFAFNYGSRQEITAAISKIALDIQNKKIEV 60
Query: 163 HDVDSSLIAKYLDTS---DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSR 219
++ L++ YL T+ D DPDL+IRT GE+RLS+F+LWQ+AYSEF F YWPDF+
Sbjct: 61 DSINEQLVSDYLMTAKFGDYADPDLLIRTSGEERLSNFMLWQLAYSEFYFTKTYWPDFTT 120
Query: 220 ELFFHALNQYNLRDRRFGGL 239
+ F + +Y RDRRFG +
Sbjct: 121 DEFKKIVEEYQHRDRRFGKI 140
>gi|289616972|emb|CBI56301.1| unnamed protein product [Sordaria macrospora]
Length = 359
Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats.
Identities = 54/192 (28%), Positives = 98/192 (51%), Gaps = 9/192 (4%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ +MDGN R+A + + GH G E ++ + G++ +T+
Sbjct: 30 LIGALKQGPIPRHVAFVMDGNRRYARSHKIETIEGHHLGFEALARVLEICYKCGVEVVTV 89
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N+ RP E+ L++L K L++ L++ VRV+G R L DD+L V+
Sbjct: 90 YAFSIENFNRPKYEVDGLMQLAKVKLEQLIQHGELLERYGASVRVLGERDLLSDDVLEVI 149
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI------ESGSVCSHDVDSSLIA 171
A T+ N L I F Y+SR+E++ AI++ ++ +S + +++
Sbjct: 150 DRAVSTTKNNKKCILNICFPYTSREEMTTAIRSTVEEYSKSSAPKSTPFSQTRITQKIMS 209
Query: 172 KYLDTSDVPDPD 183
K D S+ + D
Sbjct: 210 KQGDKSEKSESD 221
Score = 90.0 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 160 VCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFS 218
+ ++ + I K++ T+D P D+ +RT +RLSDF+LWQ ++ F+ +WP+F
Sbjct: 269 PNAENITAETIDKHMYTADCPPLDMFVRTSDVERLSDFMLWQCHQDTQMFFLKCFWPEFD 328
Query: 219 RELFFHALNQYNLRDRR 235
F L ++ R ++
Sbjct: 329 LRHFLPVLLEWQWRQKK 345
>gi|238584309|ref|XP_002390522.1| hypothetical protein MPER_10182 [Moniliophthora perniciosa FA553]
gi|215454020|gb|EEB91452.1| hypothetical protein MPER_10182 [Moniliophthora perniciosa FA553]
Length = 253
Score = 162 bits (409), Expect = 5e-38, Method: Composition-based stats.
Identities = 60/209 (28%), Positives = 90/209 (43%), Gaps = 29/209 (13%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + P H+ +MDGN R+A G GH +G E I
Sbjct: 40 LFKVLAAGPVPQHVAFVMDGNRRYARMLGKEVKHGHGEGYESLRR-------------AI 86
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLK---KGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AF+I N++R E+ L+ L L + L + N+++ VIG + V+
Sbjct: 87 YAFAIENFKRSKQEVDTLMALAVDKLDELCRHGDLLNQYNVRLNVIGRTDLFPSHVKTVV 146
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
K+ ED TR+N G L I Y S DEI A+ + + L T+
Sbjct: 147 KKPEDLTRMNDGFILNICMPYESTDEIRTAVDS----------APITITPEKXTSRLMTT 196
Query: 178 DV---PDPDLIIRTGGEKRLSDFLLWQVA 203
+ P D++IRT G RLSD +LWQ A
Sbjct: 197 ERGSPPRVDILIRTSGVTRLSDIMLWQRA 225
>gi|157866080|ref|XP_001681746.1| cis-prenyltransferase-like protein [Leishmania major]
gi|68125045|emb|CAJ02376.1| cis-prenyltransferase-like protein [Leishmania major strain
Friedlin]
Length = 391
Score = 161 bits (408), Expect = 8e-38, Method: Composition-based stats.
Identities = 75/303 (24%), Positives = 117/303 (38%), Gaps = 76/303 (25%)
Query: 12 DHIGIIMDGNGRWAAAR------------------------------------------- 28
H+GIIMDGN R+ +
Sbjct: 89 RHLGIIMDGNRRYGRRQSTAARGPDPSALREIREELCSATELTAAHSAAEQACWLAARYK 148
Query: 29 ------GLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLI 82
GHR G E E++ + I +T++AFS +NW RP +E+ L+ L
Sbjct: 149 RFAAVIQHSSLVGHRLGGEKLLEVIKHSMAAHIDMVTVYAFSTDNWNRPAAEVDALISLF 208
Query: 83 KSFLKKGFYSLKKNNIKVRVIGNRLS-LDDDILCVLKEAEDQTRLNT--GLNLFIAFNYS 139
F + + +I VR I L + ++ E +TR L L I +YS
Sbjct: 209 FFFFDRIRKEALERHIFVRFISTEPFRLPPRAVEFMRSVERETRAVQPRRLVLNICVSYS 268
Query: 140 SRDEISRAIKNIFQDIESGSVCS-------HDVDSSLIAKYLDTSDVPD----------- 181
+ E+ A + S +V + + + S D
Sbjct: 269 GQSEVLAACNRLVARRLRDSTDPGSAAAVATEVTKKELDREMLRSITQDEHEAEDAHIFG 328
Query: 182 ------PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
P+LIIRT GE+R+S+FLL++ AYSEFVF+ + WP+ ++E AL + R++R
Sbjct: 329 GGASVEPELIIRTSGEQRISNFLLYECAYSEFVFLDKAWPEVTQEDIRQALADFARREKR 388
Query: 236 FGG 238
G
Sbjct: 389 KGR 391
>gi|322489442|emb|CBZ24700.1| cis-prenyltransferase-like protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 389
Score = 161 bits (408), Expect = 8e-38, Method: Composition-based stats.
Identities = 74/303 (24%), Positives = 122/303 (40%), Gaps = 76/303 (25%)
Query: 12 DHIGIIMDGNGRWAAARGL----------------------------------------- 30
H+GIIMDGN R+ + L
Sbjct: 87 RHLGIIMDGNRRYGSRHALTARGPVPSVLREIREELCNAPELIETHSAAEQLCWLAARYK 146
Query: 31 --------PRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLI 82
GHR G E E+++ + E I +T++AFS +NW RP +E+ L+ L
Sbjct: 147 RFAAAIQHSSLDGHRVGGEKLLEVISHSMEAHIDMVTVYAFSTDNWNRPAAEVDALMSLF 206
Query: 83 KSFLKKGFYSLKKNNIKVRVIGNRLS-LDDDILCVLKEAEDQTR--LNTGLNLFIAFNYS 139
F + + +I VR I L ++ ++ E +TR L L I +YS
Sbjct: 207 FFFFDRIRKEALERHIFVRFISTEPFRLPPRVVEFMRSVERETRVVQPRRLVLNICVSYS 266
Query: 140 SRDEISRAIKNIFQDI------------ESGSVCSHDVDSSLIAKYLDTSD--------- 178
+ E+ A + + V ++D ++
Sbjct: 267 GQSEVVVACNRLVARRLRDSSGTASAAAVATEVTKEELDREMLRSITQNEHEAEDAHIFG 326
Query: 179 ---VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
+P+LI+RT GE+R+S+FLL++ AYSEFVF+ + WP+ ++E AL+ + R++R
Sbjct: 327 GDVSVEPELILRTSGEQRISNFLLYECAYSEFVFLDKTWPEVTKEDIRQALSDFTRREKR 386
Query: 236 FGG 238
G
Sbjct: 387 KGR 389
>gi|85077739|ref|XP_956051.1| hypothetical protein NCU03460 [Neurospora crassa OR74A]
gi|28917094|gb|EAA26815.1| hypothetical protein NCU03460 [Neurospora crassa OR74A]
Length = 359
Score = 161 bits (407), Expect = 8e-38, Method: Composition-based stats.
Identities = 49/158 (31%), Positives = 86/158 (54%), Gaps = 3/158 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ +MDGN R+A + + GH G E ++ + G++ +T+
Sbjct: 30 LIGALKQGPVPRHVAFVMDGNRRYARSHKIETIEGHHLGFEALARVLEICYKCGVEVVTV 89
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N+ RP E+ L++L K L++ L++ VRV+G R L DD+L V+
Sbjct: 90 YAFSIENFNRPKYEVDGLMQLAKVKLEQLIQHGELLERYGASVRVLGERDLLSDDVLEVI 149
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI 155
A T+ N L I F Y+SR+E++ AI++ ++
Sbjct: 150 DRAVSTTKNNKKCILNICFPYTSREEMTTAIRSTVEEY 187
Score = 91.5 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 163 HDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSREL 221
++ + I K++ T+D P D+ +RT G +RLSDF+LWQ ++ F+ +WP+F
Sbjct: 272 ENITTETIDKHMYTADCPPLDIFVRTSGVERLSDFMLWQCHQDTQMFFLKCFWPEFDLRH 331
Query: 222 FFHALNQYNLRDRR 235
F L ++ R ++
Sbjct: 332 FLPVLLEWQWRQKK 345
>gi|241745120|ref|XP_002405496.1| cis-prenyltransferase, putative [Ixodes scapularis]
gi|215505821|gb|EEC15315.1| cis-prenyltransferase, putative [Ixodes scapularis]
Length = 211
Score = 161 bits (407), Expect = 9e-38, Method: Composition-based stats.
Identities = 48/164 (29%), Positives = 82/164 (50%), Gaps = 3/164 (1%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
V + + P H+ +IMDGN R+A + + GH G E +E++ +E+GI +T++
Sbjct: 17 VRVLKTGKIPTHLAVIMDGNRRFAKKQNMQCVEGHLHGFEKLSEVLFWCSELGITEVTVY 76
Query: 62 AFSINNWRRPVSEISELVKLIKSFLK---KGFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
AFSI N++R E+ L+ L L+ + + + VRV+GN L ++ V+
Sbjct: 77 AFSIENFKRSKEEVDGLMDLALKKLESLLNEMEKIHEKGLCVRVLGNLSYLPVEVQKVIA 136
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCS 162
+ QT+ NT L I +Y+SR+E+ KN +
Sbjct: 137 DVVLQTQHNTRCYLNICISYTSREEMCNEYKNWLPVFKRVFCLP 180
>gi|145607055|ref|XP_361476.2| hypothetical protein MGG_12110 [Magnaporthe oryzae 70-15]
gi|145014659|gb|EDJ99227.1| hypothetical protein MGG_12110 [Magnaporthe oryzae 70-15]
Length = 351
Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 49/172 (28%), Positives = 87/172 (50%), Gaps = 3/172 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ MDGN R+A + + AGH G E ++ G+K +T+
Sbjct: 30 LIGALRQGPIPRHVAFEMDGNRRYARSHKIETVAGHHMGFEALARVLEICYNCGVKVVTV 89
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N+ RP E+ L+++ K L++ L + +V + G R + D+L +
Sbjct: 90 YAFSIENFNRPKYEVEGLMQMAKYKLEQLLEHGEVLDRYGARVIISGQRDLIPPDVLGFV 149
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL 169
A ++T+ N G L I F Y+SR+EI++AI++ + S + S
Sbjct: 150 DRAVNETKHNKGHILNICFPYTSREEITQAIRSTAVEYSSHPRPQNSAFSQT 201
Score = 91.5 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 153 QDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIP 211
QD+ + + + ++ T++ P DL IRT G +RLSDF+LWQ ++ F+
Sbjct: 254 QDVPRAFKNPETITAETLNNHMYTAECPPLDLFIRTSGVERLSDFMLWQCHQDTQIFFLK 313
Query: 212 EYWPDFSRELFFHALNQYNLRDR 234
WPDF F L ++ R +
Sbjct: 314 CLWPDFDLWYFLPVLVEWQWRQK 336
>gi|259484938|tpe|CBF81586.1| TPA: prenyltransferase, putative (AFU_orthologue; AFUA_4G11350)
[Aspergillus nidulans FGSC A4]
Length = 403
Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 53/166 (31%), Positives = 83/166 (50%), Gaps = 3/166 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+V ++ P HI IMDGN R+A + G+ GH G E I+ G++ +TI
Sbjct: 31 LVGAIKQGPVPQHIAFIMDGNRRFARSHGIETVEGHNLGFEALARILEVCYRSGVQVVTI 90
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+++ + L + L + KVR++G L D+L +
Sbjct: 91 YAFSIENFKRSKFEVDALMEMARVKLSQMAQHGEILDRYGAKVRILGRLDLLRPDVLAAV 150
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSH 163
A D T+ N L I F Y+SRDEI+ AI+ + +H
Sbjct: 151 NRAVDMTKNNGDRVLNICFPYTSRDEITGAIRETVAEYSKPIRTAH 196
Score = 89.2 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 161 CSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVA-YSEFVFIPEYWPDFSR 219
+ +A ++ T D P DL+IRT G +RLSDF+LWQ +E F+ WP+F
Sbjct: 291 SPETITRQTLADHMLTRDNPPLDLLIRTSGVERLSDFMLWQCHENTEIAFLDILWPEFDL 350
Query: 220 ELFFHALNQYNL 231
F L ++
Sbjct: 351 WHFLPVLLRWQR 362
>gi|330941380|ref|XP_003306054.1| hypothetical protein PTT_19071 [Pyrenophora teres f. teres 0-1]
gi|311316647|gb|EFQ85851.1| hypothetical protein PTT_19071 [Pyrenophora teres f. teres 0-1]
Length = 360
Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 47/175 (26%), Positives = 80/175 (45%), Gaps = 3/175 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ S+ P H+ +MDGN R+A + GH G E I+ + G+K +TI
Sbjct: 30 LIGSLKQGPVPQHVAFVMDGNRRFARNHHIETVEGHNLGFESLARILEVCYKTGVKVVTI 89
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+ + K L++ L + VRV+G R + D+L +
Sbjct: 90 YAFSIENFKRSKHEVDALMSMAKVKLQQLAEHGALLDRYGASVRVLGQRELISPDVLMAV 149
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAK 172
+A T N L + F Y+SR EI+ A+ + + ++
Sbjct: 150 DKAVAMTAHNKKAVLNVCFPYTSRHEITTAVMKTVETYSTPIHNLTTPSKRTFSE 204
Score = 83.1 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 161 CSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVA-YSEFVFIPEYWPDFSR 219
+ + + + T+D P DL++RT G +RLSDF+LWQ + VF+ WP+F
Sbjct: 270 DPESISAQTLNDNMMTADAPPLDLLVRTSGVERLSDFMLWQAHENTSIVFLKCLWPEFDL 329
Query: 220 ELFFHALNQYNL 231
L ++
Sbjct: 330 WQLLPVLVEWQW 341
>gi|255561403|ref|XP_002521712.1| undecaprenyl diphosphate synthase, putative [Ricinus communis]
gi|223539103|gb|EEF40699.1| undecaprenyl diphosphate synthase, putative [Ricinus communis]
Length = 381
Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 3/155 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M + P+HI IMDGN R+A + AGHR G I+ E+G+K +T+
Sbjct: 24 MFRILSVGPIPNHIAFIMDGNRRYAKKENMKEGAGHRAGFSALISILKYCYELGVKYVTV 83
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSL---KKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI+N++R E+ +L+ L+ +++ + I+V IGN L++ +
Sbjct: 84 YAFSIDNFKRRPDEVQDLMDLMLEKIEELLKEESIVNQYGIRVYFIGNLTLLNEPVRIAA 143
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIF 152
++ T NT I Y+S DEI A++
Sbjct: 144 EKVMRATANNTKCTFLICIAYTSCDEIVHAVQESC 178
Score = 78.8 bits (193), Expect = 6e-13, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 170 IAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQY 229
I + + + P+PD++IR+ GE RLS+FLLWQ + WP+ + + +
Sbjct: 284 IERNMYMAVAPEPDILIRSSGETRLSNFLLWQASDCMLYSPDALWPEIGFQHLVWVVINF 343
Query: 230 NL 231
Sbjct: 344 QQ 345
>gi|14423546|gb|AAK62455.1|AF387010_1 Unknown protein [Arabidopsis thaliana]
gi|18377518|gb|AAL66925.1| unknown protein [Arabidopsis thaliana]
Length = 221
Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 23/209 (11%)
Query: 46 IVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRV 102
++ E+GIK +TI+AFSI+N+RR E+ ++ L+ +K + + I+V
Sbjct: 1 MLQYCYELGIKYVTIYAFSIDNFRRKPEEVESVMDLMLEKIKSLLEKESIVHQYGIRVYF 60
Query: 103 IGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIF----QDIESG 158
IGN L+D + ++ T N+ + L I Y+S DEI +A+K +IE+
Sbjct: 61 IGNLALLNDQVRAAAEKVMKATAKNSRVVLLICIAYNSTDEIVQAVKKSCINKSDNIEAS 120
Query: 159 SVCSHDVDSSL----------------IAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQV 202
+ D DS + I + + S P+PD++IR+ GE RLS+FLLWQ
Sbjct: 121 NYKHEDSDSDIEGTDMENQEKKIQLVDIEENMQMSVAPNPDILIRSSGETRLSNFLLWQT 180
Query: 203 AYSEFVFIPEYWPDFSRELFFHALNQYNL 231
++ WP+ A+ +
Sbjct: 181 GNTQLCSPAALWPEIGLRHLLWAILNFQR 209
>gi|302412783|ref|XP_003004224.1| dehydrodolichyl diphosphate synthase [Verticillium albo-atrum
VaMs.102]
gi|261356800|gb|EEY19228.1| dehydrodolichyl diphosphate synthase [Verticillium albo-atrum
VaMs.102]
Length = 366
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 55/190 (28%), Positives = 96/190 (50%), Gaps = 9/190 (4%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ MDGN R+A + + GH G E ++ + G+K +T+
Sbjct: 29 LIGALKQGPVPQHVAFEMDGNRRYARGKRMETIEGHHHGFEALARVLEICYKSGVKVVTV 88
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N+ RP E+ L++L K L++ L K VRV+G R L +D+L V+
Sbjct: 89 YAFSIENFNRPQYEVDGLMELAKVKLEQLTHHGDLLDKYGAAVRVLGQRDLLREDVLEVV 148
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI------ESGSVCSHDVDSSLIA 171
A + T+ N L I Y+SR+E++ AI++ +D + + + + +++
Sbjct: 149 DRAVEMTKNNKKNALNICLPYTSREEMATAIRSTVEDYMTPPEPKFTAFPASRITQKILS 208
Query: 172 KYLDTSDVPD 181
K LD D D
Sbjct: 209 KQLDEKDQKD 218
Score = 85.8 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 161 CSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSR 219
+ + + ++ T+ P D+ +RT G +RLSDF+LWQ ++ F+ WP+F
Sbjct: 272 NPETITAETLNNHMYTAGDPPLDIFVRTSGVERLSDFMLWQAHQDTQIFFLKCLWPEFDL 331
Query: 220 ELFFHALNQYNLRDR 234
+ + L ++ R +
Sbjct: 332 QHWLPVLLEWQWRQK 346
>gi|119500270|ref|XP_001266892.1| prenyltransferase, putative [Neosartorya fischeri NRRL 181]
gi|119415057|gb|EAW24995.1| prenyltransferase, putative [Neosartorya fischeri NRRL 181]
Length = 403
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 54/171 (31%), Positives = 84/171 (49%), Gaps = 3/171 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P HI +MDGN R+A + G+ GH G E I+ + G+K +TI
Sbjct: 31 LIGALKQGPVPQHIAFVMDGNRRFARSHGIETVEGHNLGFEALARILEVCYKCGVKVVTI 90
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+ + K L++ L + KVRV+G L D+L +
Sbjct: 91 YAFSIENFKRSKFEVDALMDMAKVKLQQMAQHGDLLDRYGAKVRVLGRLDLLKPDVLEAV 150
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSS 168
A + T N L I F Y+SRDEI+ AI++ D S+
Sbjct: 151 NRAVEMTSRNGERVLNICFPYTSRDEITGAIRDTVADYSKPLKSIRSNSSA 201
Score = 90.0 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 7/128 (5%)
Query: 106 RLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV 165
R D + T L+ G + A + E+ A ++ + +
Sbjct: 247 RSEGPDKVYEAGSGFSSSTTLHLGGHQDAANGKAP--ELGNASES----GKIVFPSPDTI 300
Query: 166 DSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFFH 224
+ ++ T P DL++RT G +RLSDF+LWQ +E VF+ WP+F F
Sbjct: 301 TRQTLTDHMLTKGNPPLDLLVRTSGVERLSDFMLWQCDEDTEIVFLDVLWPEFDLWHFLP 360
Query: 225 ALNQYNLR 232
L + R
Sbjct: 361 VLLGWQRR 368
>gi|159125384|gb|EDP50501.1| prenyltransferase, putative [Aspergillus fumigatus A1163]
Length = 403
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 54/171 (31%), Positives = 84/171 (49%), Gaps = 3/171 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P HI +MDGN R+A + G+ GH G E I+ + G+K +TI
Sbjct: 31 LIGALKQGPVPQHIAFVMDGNRRFARSHGIETVEGHNLGFEALARILEVCYKCGVKVVTI 90
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+ + K L++ L + KVRV+G L D+L +
Sbjct: 91 YAFSIENFKRSKFEVDALMDMAKVKLQQMAQHGDLLDRYGAKVRVLGRLDLLKPDVLDAV 150
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSS 168
A + T N L I F Y+SRDEI+ AI++ D S+
Sbjct: 151 NRAVEMTSRNGERVLNICFPYTSRDEITGAIRDTVADYSKPLQSIRSNSSA 201
Score = 91.2 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 7/128 (5%)
Query: 106 RLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV 165
R D + T L+ G + A + E+ A ++ + +
Sbjct: 247 RSEGPDRVYEAGSGFSSSTTLHLGGHQDAANGKAP--ELGNASES----GKIVFPSPDTI 300
Query: 166 DSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFFH 224
+ ++ T P DL++RT G +RLSDF+LWQ +E VF+ WP+F F
Sbjct: 301 TRQTLTDHMLTKGNPPLDLLVRTSGVERLSDFMLWQCDEDTEIVFLDVLWPEFDLWHFLP 360
Query: 225 ALNQYNLR 232
L + R
Sbjct: 361 VLLSWQRR 368
>gi|189193273|ref|XP_001932975.1| dehydrodolichyl diphosphate synthase [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187978539|gb|EDU45165.1| dehydrodolichyl diphosphate synthase [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 360
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 47/175 (26%), Positives = 80/175 (45%), Gaps = 3/175 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ S+ P H+ +MDGN R+A + GH G E I+ + G+K +TI
Sbjct: 30 LIGSLKQGPVPQHVAFVMDGNRRFARNHHIETVEGHNLGFESLARILEVCYKTGVKVVTI 89
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+ + K L++ L + VRV+G R + D+L +
Sbjct: 90 YAFSIENFKRSKHEVDALMSMAKVKLQQLAEHGALLDRYGASVRVLGQRELISPDVLMAV 149
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAK 172
+A T N L + F Y+SR EI+ A+ + + ++
Sbjct: 150 DKAVAMTAHNKKAVLNVCFPYTSRHEITTAVMKTVETYSTPIHNLTTPSKRTFSE 204
Score = 83.8 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 161 CSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVA-YSEFVFIPEYWPDFSR 219
+ + + + T+D P DL++RT G +RLSDF+LWQ + VF+ WP+F
Sbjct: 270 DPESISAQTLNDNMMTADAPPLDLLVRTSGVERLSDFMLWQAHENTSIVFLKCLWPEFDL 329
Query: 220 ELFFHALNQYNL 231
F L ++
Sbjct: 330 WQFLPVLVEWQW 341
>gi|70993694|ref|XP_751694.1| prenyltransferase [Aspergillus fumigatus Af293]
gi|66849328|gb|EAL89656.1| prenyltransferase, putative [Aspergillus fumigatus Af293]
Length = 403
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 54/171 (31%), Positives = 84/171 (49%), Gaps = 3/171 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P HI +MDGN R+A + G+ GH G E I+ + G+K +TI
Sbjct: 31 LIGALKQGPVPQHIAFVMDGNRRFARSHGIETVEGHNLGFEALARILEVCYKCGVKVVTI 90
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+ + K L++ L + KVRV+G L D+L +
Sbjct: 91 YAFSIENFKRSKFEVDALMDMAKVKLQQMAQHGDLLDRYGAKVRVLGRLDLLKPDVLDAV 150
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSS 168
A + T N L I F Y+SRDEI+ AI++ D S+
Sbjct: 151 NRAVEMTSRNGERVLNICFPYTSRDEITGAIRDTVADYSKPLQSIRSNSSA 201
Score = 91.2 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 7/128 (5%)
Query: 106 RLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV 165
R D + T L+ G + A + E+ A ++ + +
Sbjct: 247 RSEGPDRVYEAGSGFSSSTTLHLGGHQDAANGKAP--ELGNASES----GKIVFPSPDTI 300
Query: 166 DSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFFH 224
+ ++ T P DL++RT G +RLSDF+LWQ +E VF+ WP+F F
Sbjct: 301 TRQTLTDHMLTKGNPPLDLLVRTSGVERLSDFMLWQCDEDTEIVFLDVLWPEFDLWHFLP 360
Query: 225 ALNQYNLR 232
L + R
Sbjct: 361 VLLSWQRR 368
>gi|241121705|ref|XP_002403312.1| undecaprenyl pyrophosphate synthetase, putative [Ixodes scapularis]
gi|215493421|gb|EEC03062.1| undecaprenyl pyrophosphate synthetase, putative [Ixodes scapularis]
Length = 396
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 55/226 (24%), Positives = 100/226 (44%), Gaps = 37/226 (16%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
P +G I DGN R+A GL GHR G + + A ++G+ +++ FS +N
Sbjct: 39 GPVPGVLGFIPDGNRRFARKLGLRVEQGHRAGSDKLGSVRTWATKLGVSQTSVYVFSTHN 98
Query: 68 WRRPVSEISELVKLIKSFLKKGFY---SLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
++RP +E++ + +F ++ K+ ++R +G+ L D+ + +A+ T
Sbjct: 99 FKRPENELNGIFSETVTFCREIIDDPARQKRRGFRIRFVGDLEMLPRDLQRTVAKADIAT 158
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N+G D+ LI +Y++ D P+ ++
Sbjct: 159 SGNSG----------------------------------DITPQLIDEYMNIEDAPETEM 184
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
+ RT GE RLSDF+LWQ ++ F P+ P+ + A+ Y
Sbjct: 185 LTRTSGEARLSDFILWQSDFAMLYFEPKNMPEVGLFDYVKAIIHYQ 230
>gi|317038645|ref|XP_001401889.2| prenyltransferase [Aspergillus niger CBS 513.88]
Length = 398
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 50/164 (30%), Positives = 81/164 (49%), Gaps = 3/164 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+V ++ P HI +MDGN R+A G+ GH G E I+ + G+K +TI
Sbjct: 31 LVGAIRQGPVPQHIAFVMDGNRRFARTHGIETVEGHNMGFEALARILEVCYKSGVKVVTI 90
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+++ + L + L + KVR++G L D+L +
Sbjct: 91 YAFSIENFKRSKFEVDALMEMARVKLSQMAQHGEILDRYGAKVRILGRLDLLRPDVLAAV 150
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVC 161
A + T N L I F Y+SRDEI+ A+++ +
Sbjct: 151 NRAVEMTSNNGDCVLNICFPYTSRDEITTAVRDTVAEYSQPLPS 194
Score = 92.3 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 145 SRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY 204
+ A + + + ++++L T D P DL++RT G +RLSDF+LWQ
Sbjct: 278 APATEPAVGKESLVFMSPETITRQTLSEHLFTHDNPPLDLLVRTSGVERLSDFMLWQCHE 337
Query: 205 -SEFVFIPEYWPDFSRELFFHALNQYNLR 232
+E VF+ WPDF F + ++ R
Sbjct: 338 DTEIVFLDVLWPDFDLWQFLPVMLRWQRR 366
>gi|169771429|ref|XP_001820184.1| prenyltransferase [Aspergillus oryzae RIB40]
gi|83768043|dbj|BAE58182.1| unnamed protein product [Aspergillus oryzae]
Length = 403
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 52/158 (32%), Positives = 80/158 (50%), Gaps = 3/158 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P HI +MDGN R+A G+ GH G E I+ G+K +TI
Sbjct: 31 LIGAIRQGPVPQHIAFVMDGNRRFARTHGIETVEGHNLGFEALARILEVCYRSGVKVVTI 90
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+++ + L + L + KVRV+G L D+L +
Sbjct: 91 YAFSIENFKRSKFEVDALMEMARVKLSQMAQHGEILDRYGAKVRVLGRLDLLRPDVLKAV 150
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI 155
A + T N L I F Y+SRDEI+ AI++ D
Sbjct: 151 NRAMEMTSNNGDRVLNICFPYTSRDEITSAIRDTVADY 188
Score = 92.3 bits (228), Expect = 6e-17, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 161 CSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSR 219
+ ++ +L T D P DL+IRT G +RLSDF+LWQ ++ VF+ WP+F
Sbjct: 293 SPETITRQTLSDHLHTKDNPPLDLLIRTSGVERLSDFMLWQCDEDTDIVFLDVLWPEFDL 352
Query: 220 ELFFHALNQYNLR 232
F L + R
Sbjct: 353 WHFLPVLLGWQRR 365
>gi|238486016|ref|XP_002374246.1| prenyltransferase, putative [Aspergillus flavus NRRL3357]
gi|220699125|gb|EED55464.1| prenyltransferase, putative [Aspergillus flavus NRRL3357]
Length = 403
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 52/158 (32%), Positives = 80/158 (50%), Gaps = 3/158 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P HI +MDGN R+A G+ GH G E I+ G+K +TI
Sbjct: 31 LIGAIRQGPVPQHIAFVMDGNRRFARTHGIETVEGHNLGFEALARILEVCYRSGVKVVTI 90
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+++ + L + L + KVRV+G L D+L +
Sbjct: 91 YAFSIENFKRSKFEVDALMEMARVKLSQMAQHGEILDRYGAKVRVLGRLDLLRPDVLKAV 150
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI 155
A + T N L I F Y+SRDEI+ AI++ D
Sbjct: 151 NRAMEMTSNNGDRVLNICFPYTSRDEITSAIRDTVADY 188
Score = 91.9 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 161 CSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSR 219
+ ++ +L T D P DL+IRT G +RLSDF+LWQ ++ VF+ WP+F
Sbjct: 293 SPETITRQTLSDHLHTKDNPPLDLLIRTSGVERLSDFMLWQCDEDTDIVFLDVLWPEFDL 352
Query: 220 ELFFHALNQYNLR 232
F L + R
Sbjct: 353 WHFLPVLLGWQRR 365
>gi|242216368|ref|XP_002473992.1| predicted protein [Postia placenta Mad-698-R]
gi|220726857|gb|EED80793.1| predicted protein [Postia placenta Mad-698-R]
Length = 200
Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats.
Identities = 50/187 (26%), Positives = 94/187 (50%), Gaps = 7/187 (3%)
Query: 52 EVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKK---GFYSLKKNNIKVRVIGNRLS 108
+ ++ ++ +AF+I N++R E+ L+ L + L + L + +++ V+G
Sbjct: 2 RLNVRCVSAYAFAIENFKRTPEEVDALMSLAEEKLLEICQHGDLLGEYGVRLNVLGKTSL 61
Query: 109 LDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSS 168
L + V+ +AE+ TR N L + Y++R++I+ A+ + + ++
Sbjct: 62 LPPRVQAVITKAEEMTRHNNRAILNLCMPYAARNDIAFAVDSTI-EHAIAEGWDREITED 120
Query: 169 LIAKYLDT--SDVPDPDLIIRTGGEKRLSDFLLWQVA-YSEFVFIPEYWPDFSRELFFHA 225
IA +L T + P D+++RT G KRLSD+LLWQ + ++ F YWPDF F
Sbjct: 121 DIAAHLMTAAAGSPPLDVLVRTSGVKRLSDYLLWQCSENTQLQFSSTYWPDFGLWDFVPI 180
Query: 226 LNQYNLR 232
+ Y +
Sbjct: 181 ILDYQQK 187
>gi|156083825|ref|XP_001609396.1| undecaprenyl pyrophosphate synthetase [Babesia bovis T2Bo]
gi|154796647|gb|EDO05828.1| undecaprenyl pyrophosphate synthetase, putative [Babesia bovis]
Length = 229
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 59/216 (27%), Positives = 109/216 (50%), Gaps = 7/216 (3%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGN R+A G+ GHR G+ E++ +GIK +T++AFS+ N++R +E++
Sbjct: 1 MDGNRRFARLMGMEVHKGHRCGLNKLMEVIEMCQLLGIKVITVYAFSLQNFQRSETEVNN 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT---RLNTGLNLFI 134
++ L K K ++ G+ L + + L+EAE+ + + + + +
Sbjct: 61 IINLATETAKSRLQPGHKQTFAIKFHGDMRFLPEYLRKTLQEAEELSDKLKTEDQILVNV 120
Query: 135 AFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRL 194
+Y R+EI+RA + I +H+ ++ L L + P+++IRT G RL
Sbjct: 121 CVSYGGRNEIARAKEKIAN---IPGDRTHEEEAKLFYSLLVGGEYKPPEILIRTSGVTRL 177
Query: 195 SDFLLWQVA-YSEFVFIPEYWPDFSRELFFHALNQY 229
SDFL++Q + ++ F F+ + WP+ S L +
Sbjct: 178 SDFLIYQCSEFTTFYFLHDTWPELSMWSLIGTLIHW 213
>gi|260200121|ref|ZP_05767612.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis T46]
gi|289442513|ref|ZP_06432257.1| undecaprenyl diphosphate synthase [Mycobacterium tuberculosis T46]
gi|289415432|gb|EFD12672.1| undecaprenyl diphosphate synthase [Mycobacterium tuberculosis T46]
Length = 216
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 53/191 (27%), Positives = 92/191 (48%), Gaps = 7/191 (3%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
S P HI ++ DGN RWA + G G+R G E++ E GI+ T++ S
Sbjct: 28 KSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWCHEAGIELATVYLLST 87
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
N +R E++ L+++I +++ N+ VR +G+ + ++ L+ A + T
Sbjct: 88 ENLQRDPDELAALIEIITDVVEE--ICAPANHWSVRTVGDLGLIGEEPARRLRGAVESTP 145
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD----VDSSLIAKYLDTSDVPD 181
++ +A Y R EI A++ + + + + V I++ L TS PD
Sbjct: 146 EVASFHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVDAVTVEGISENLYTSGQPD 205
Query: 182 PDLIIRTGGEK 192
PDL+IRT GE+
Sbjct: 206 PDLVIRTSGEQ 216
>gi|323334501|gb|EGA75875.1| Rer2p [Saccharomyces cerevisiae AWRI796]
Length = 236
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 9/206 (4%)
Query: 30 LPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKG 89
+ GH G + I+ E G+ T+FAFSI N++R E+ L+ L + +++
Sbjct: 1 MDVKEGHEAGFVSMSRILELCYEAGVDTATVFAFSIENFKRSSREVESLMTLARERIRQI 60
Query: 90 FYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISR 146
K +++++IG+ LD +L ++ A + T+ N L I F Y+ R+EI
Sbjct: 61 TERGELACKYGVRIKIIGDLSLLDKSLLEDVRVAVETTKNNKRATLNICFPYTGREEILH 120
Query: 147 AIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVA--Y 204
AIK + G+ + S + +L T+ VP DL+IRT G RLSDFL+WQ +
Sbjct: 121 AIKETIVQHKKGAA----IGESTLESHLYTAGVPPLDLLIRTSGVSRLSDFLIWQASSKG 176
Query: 205 SEFVFIPEYWPDFSRELFFHALNQYN 230
+ WP+F L +++
Sbjct: 177 VRIELLDCLWPEFGPIRMAWILLKFS 202
>gi|323356279|gb|EGA88083.1| Rer2p [Saccharomyces cerevisiae VL3]
Length = 236
Score = 158 bits (401), Expect = 4e-37, Method: Composition-based stats.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 9/206 (4%)
Query: 30 LPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKG 89
+ GH G + I+ E G+ T+FAFSI N++R E+ L+ L + +++
Sbjct: 1 MDVKEGHEAGFVSMSRILELCYEAGVDTATVFAFSIENFKRSSREVESLMTLARERIRQI 60
Query: 90 FYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISR 146
K +++++IG+ LD +L ++ A + T+ N L I F Y+ R+EI
Sbjct: 61 TERGELACKYGVRIKIIGDLSLLDKSLLEDVRVAVETTKNNKRATLNICFPYTGREEILH 120
Query: 147 AIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVA--Y 204
A+K + G+ + S + +L T+ VP DL+IRT G RLSDFL+WQ +
Sbjct: 121 AMKETIVQHKKGAA----IGESTLESHLYTAGVPPLDLLIRTSGVSRLSDFLIWQASSKG 176
Query: 205 SEFVFIPEYWPDFSRELFFHALNQYN 230
+ WP+F L +++
Sbjct: 177 VRIELLDCLWPEFGPIRMAWILLKFS 202
>gi|255947692|ref|XP_002564613.1| Pc22g05810 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591630|emb|CAP97869.1| Pc22g05810 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 403
Score = 158 bits (401), Expect = 5e-37, Method: Composition-based stats.
Identities = 53/158 (33%), Positives = 84/158 (53%), Gaps = 3/158 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ +MDGN R+A + G+ GH G E I+ + G+K +TI
Sbjct: 31 LIGALKQGPVPQHVAFVMDGNRRFARSHGIETVEGHNLGFEALARILEVCYKSGVKVVTI 90
Query: 61 FAFSINNWRRPVSEISELVKLIKSFL---KKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+++ K L + L + KVRV+G L D+L +
Sbjct: 91 YAFSIENFKRSKFEVDALMEMAKVKLSQMAQHGDLLDRYGAKVRVLGRLDMLKPDVLEAV 150
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI 155
+A D T N L I F Y+SRDEI+ AI++ +D
Sbjct: 151 NKAVDMTSRNGDRVLNICFPYTSRDEITSAIRDTVEDY 188
Score = 85.0 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 161 CSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVA-YSEFVFIPEYWPDFSR 219
+ + ++ T P D++IRT G +RLSDF+LWQ +E VF+ WP+F
Sbjct: 292 SPETISRQTLNDHMLTKGTPPLDILIRTSGVERLSDFMLWQTHENTEIVFLNVMWPEFDL 351
Query: 220 ELFFHALNQYNLR 232
F + + R
Sbjct: 352 WHFLPVMLGWQRR 364
>gi|154333782|ref|XP_001563146.1| cis-prenyltransferase-like protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134060158|emb|CAM45565.1| cis-prenyltransferase-like protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 393
Score = 158 bits (401), Expect = 5e-37, Method: Composition-based stats.
Identities = 78/301 (25%), Positives = 119/301 (39%), Gaps = 75/301 (24%)
Query: 12 DHIGIIMDGNGRWAAARG------------------------------------------ 29
H+GIIMDGN R+ G
Sbjct: 92 RHLGIIMDGNRRYGRRHGTATRDPDVPALRQIREEMCSVPGFTVTDSAIRQSRWLSTCYK 151
Query: 30 -------LPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLI 82
GHR G E E++ E I +T++AFS +NW RP +E+ L+ L
Sbjct: 152 RFVAAIQHTSLDGHRVGGEKLLEVINFCMEARISIMTVYAFSTDNWNRPAAEVDALMLLF 211
Query: 83 KSFLKKGFYSLKKNNIKVRVIGNRLS-LDDDILCVLKEAEDQTRLNT--GLNLFIAFNYS 139
F + +I VR I L ++ ++ E +TR L L I +YS
Sbjct: 212 FFFFDRIQKVALDRHIFVRFISTEPCRLPPRVVEFMRTVEGETRAVQPRRLVLNICVSYS 271
Query: 140 SRDEISRAIKNIFQDIESGSVCSH-----------DVDSSLIAKYL-DTSDVPD------ 181
+ E+ A + S D+D ++ D + D
Sbjct: 272 GQSEVVAACNRLLARRLRDSTDPAAAAIGTEVTKADLDQEMLRSITQDEHEAEDAQVFGG 331
Query: 182 -----PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
P+LI+RT GE+R+S+FLL++ AYSEFVF+ + WP+ ++E AL+ + RD+R
Sbjct: 332 DVSVEPELILRTSGEQRMSNFLLYECAYSEFVFLNKTWPEVTQEDIQQALSDFACRDKRR 391
Query: 237 G 237
G
Sbjct: 392 G 392
>gi|302659128|ref|XP_003021259.1| hypothetical protein TRV_04691 [Trichophyton verrucosum HKI 0517]
gi|291185147|gb|EFE40641.1| hypothetical protein TRV_04691 [Trichophyton verrucosum HKI 0517]
Length = 532
Score = 158 bits (399), Expect = 7e-37, Method: Composition-based stats.
Identities = 51/158 (32%), Positives = 83/158 (52%), Gaps = 3/158 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ +MDGN R+A +G+ R GH G E +I+ GIK +TI
Sbjct: 31 LIGALRQGPIPQHVAFVMDGNRRFARNQGIERVEGHNLGFEALAKILEVCYSSGIKVVTI 90
Query: 61 FAFSINNWRRPVSEISELVKLIKSF---LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+++ K L + L++ VRV+G R + D+L +
Sbjct: 91 YAFSIENFKRSKYEVDALMEMAKLKLLQLSEHGELLERYGASVRVLGRRDQIRPDVLEAV 150
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI 155
+ T N L I F Y+SRDEI+ A++N +
Sbjct: 151 DRTVELTSGNGDAILNICFPYTSRDEITSAVRNTVMEY 188
Score = 93.8 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 160 VCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFS 218
+ + ++ ++ T+ P D++IRT G +RLSDF+LWQ ++ VF+ WP FS
Sbjct: 320 HSPETITTQTLSDHMLTAGCPPLDILIRTSGVERLSDFMLWQCHQDTQIVFLDTLWPAFS 379
Query: 219 RELFFHALNQYNLRDRRFG 237
F + + R R+ G
Sbjct: 380 LWEFLPVIWDWQRRIRKTG 398
>gi|302498967|ref|XP_003011480.1| hypothetical protein ARB_02330 [Arthroderma benhamiae CBS 112371]
gi|291175031|gb|EFE30840.1| hypothetical protein ARB_02330 [Arthroderma benhamiae CBS 112371]
Length = 520
Score = 158 bits (399), Expect = 8e-37, Method: Composition-based stats.
Identities = 51/158 (32%), Positives = 83/158 (52%), Gaps = 3/158 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ +MDGN R+A +G+ R GH G E +I+ GIK +TI
Sbjct: 31 LIGALRQGPIPQHVAFVMDGNRRFARNQGIERVEGHNLGFEALAKILEVCYSSGIKVVTI 90
Query: 61 FAFSINNWRRPVSEISELVKLIKSF---LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+++ K L + L++ VRV+G R + D+L +
Sbjct: 91 YAFSIENFKRSKYEVDALMEMAKLKLLQLSEHGELLERYGASVRVLGRRDQIRPDVLEAV 150
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI 155
+ T N L I F Y+SRDEI+ A++N +
Sbjct: 151 DRTVELTSGNGDAILNICFPYTSRDEITSAVRNTVMEY 188
Score = 93.8 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 160 VCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFS 218
+ + ++ ++ T+ P D++IRT G +RLSDF+LWQ ++ VF+ WP FS
Sbjct: 317 HSPETITTQTLSDHMLTAGCPPLDILIRTSGVERLSDFMLWQCHQDTQIVFLDTLWPAFS 376
Query: 219 RELFFHALNQYNLRDRRFG 237
F + + R R+ G
Sbjct: 377 LWEFLPVIWDWQRRIRKTG 395
>gi|115391235|ref|XP_001213122.1| hypothetical protein ATEG_03944 [Aspergillus terreus NIH2624]
gi|114194046|gb|EAU35746.1| hypothetical protein ATEG_03944 [Aspergillus terreus NIH2624]
Length = 397
Score = 158 bits (399), Expect = 8e-37, Method: Composition-based stats.
Identities = 52/165 (31%), Positives = 81/165 (49%), Gaps = 3/165 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+V ++ P H+ +MDGN R+A G+ GH G E I+ G+K +TI
Sbjct: 31 LVGAIRQGPVPQHVAFVMDGNRRFARTHGIETVEGHNLGFEALARILEVCYRSGVKVVTI 90
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+++ + L + L + KVRV+G L D+L +
Sbjct: 91 YAFSIENFKRSKFEVDALMEMARVKLSQMAQHGEILDRYGAKVRVLGRLDLLRPDVLAAV 150
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCS 162
A D T N L I F Y+SRDEI+ AI++ + +
Sbjct: 151 NRAMDMTSNNGDCVLNICFPYTSRDEITGAIRDTVTEYSKPLRSA 195
Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 160 VCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFS 218
+ + + +L T D P DL++RT G +RLSDF+LWQ +E VF+ WP+F
Sbjct: 294 MSPETITRQTLTSHLLTKDNPPLDLLVRTSGVERLSDFMLWQCHEDTEIVFLDVLWPEFD 353
Query: 219 RELFFHALNQYNLR 232
F L + R
Sbjct: 354 LWHFLPVLLGWQRR 367
>gi|296808123|ref|XP_002844400.1| dehydrodolichyl diphosphate synthase [Arthroderma otae CBS 113480]
gi|238843883|gb|EEQ33545.1| dehydrodolichyl diphosphate synthase [Arthroderma otae CBS 113480]
Length = 419
Score = 158 bits (399), Expect = 8e-37, Method: Composition-based stats.
Identities = 52/158 (32%), Positives = 84/158 (53%), Gaps = 3/158 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ +MDGN R+A +G+ R GH G E +I+ GIK +TI
Sbjct: 31 LIGALRQGPIPQHVAFVMDGNRRFARNQGIERVEGHNLGFEALAKILEVCYSSGIKVVTI 90
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLK---KGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+++ K L+ + L++ VRV+G R + D+L +
Sbjct: 91 YAFSIENFKRSKYEVDALMEMAKLKLQQLSEHGELLERYGASVRVLGRRDQIRPDVLEAV 150
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI 155
+ T N L I F Y+SRDEI+ A++N D
Sbjct: 151 DRTVETTSGNGDAILNICFPYTSRDEITSAVRNTVVDY 188
Score = 96.9 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 160 VCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVA-YSEFVFIPEYWPDFS 218
+ + ++ ++ T+ P D++IRT G +RLSDF+LWQ ++ VF+ WP FS
Sbjct: 303 HSPETITTQTLSDHMLTAGCPPLDILIRTSGVERLSDFMLWQCHQETQIVFLDTLWPAFS 362
Query: 219 RELFFHALNQYNLRDRRFG 237
F + + R R+ G
Sbjct: 363 LWDFLPVVWDWQRRQRKTG 381
>gi|289524565|ref|ZP_06441419.1| di-trans,poly-cis-decaprenylcistransferase [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289502196|gb|EFD23360.1| di-trans,poly-cis-decaprenylcistransferase [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 144
Score = 158 bits (399), Expect = 9e-37, Method: Composition-based stats.
Identities = 55/143 (38%), Positives = 74/143 (51%), Gaps = 1/143 (0%)
Query: 97 NIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIE 156
NI++R G L +D+ + AE +T L+L + NY R EI A+ I
Sbjct: 1 NIRLRFSGRIDKLPEDLRDLALWAEKETEAGDKLDLILCLNYGGRQEIIDAVNKILAAKT 60
Query: 157 SGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPD 216
+D +L DVPDPDLIIRT GEKRLS+F LWQ +YSE F WP+
Sbjct: 61 DCDDVLE-IDEDCFRGHLYLPDVPDPDLIIRTSGEKRLSNFWLWQSSYSELYFTDCLWPE 119
Query: 217 FSRELFFHALNQYNLRDRRFGGL 239
F A+ +Y R+RR+GG+
Sbjct: 120 FDEGKLREAVEEYQRRERRYGGI 142
>gi|85000775|ref|XP_955106.1| dehydrodolichyl diphosphate synthase [Theileria annulata strain
Ankara]
gi|65303252|emb|CAI75630.1| dehydrodolichyl diphosphate synthase, putative [Theileria annulata]
Length = 205
Score = 157 bits (398), Expect = 9e-37, Method: Composition-based stats.
Identities = 68/205 (33%), Positives = 103/205 (50%), Gaps = 4/205 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M+ M DH+ +IMDGN R+A L + GH G EI+ ++ VG+K +TI
Sbjct: 1 MIFVMKPMLKVDHMALIMDGNRRYAKNLNLQQSQGHLNGFNKLLEILEFSSLVGLKVITI 60
Query: 61 FAFSINNWRRPVSEISELVKLIKSFL--KKGFYSLKKN-NIKVRVIGNRLSLDDDILCVL 117
FAFS+ N+ R EIS+L+ L K L + ++R G+ L DI +L
Sbjct: 61 FAFSLLNFSRTRKEISDLLNLFVDPSGPKSQLEELCERIGCRIRFCGDFSFLGQDIKQIL 120
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+ + +T + L + +Y R+EI A+ I ++ S + + L T
Sbjct: 121 NDVQSKTNHYNKMTLNLCASYGGRNEIINALNKINPKNDTNSSDFKSLKEQYY-RNLYTG 179
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQV 202
D P+L+IRT GE RLSDFL++QV
Sbjct: 180 DFTPPNLLIRTSGESRLSDFLIYQV 204
>gi|171689896|ref|XP_001909887.1| hypothetical protein [Podospora anserina S mat+]
gi|170944910|emb|CAP71021.1| unnamed protein product [Podospora anserina S mat+]
Length = 351
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 3/158 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ S+ P H+ MDGN R+A + + GH G E ++ + G+K +T+
Sbjct: 30 LIGSLSQGPIPGHVAFEMDGNRRYARSHKIETVEGHHLGFEALARVLEICYKCGVKVVTV 89
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFS+ N+ RP E+ L++L K L++ L + V+V+G + D+L V+
Sbjct: 90 YAFSLENFHRPKYEVDGLMQLAKVKLEQLIQHGELLDRYGASVKVLGRLDLIPPDVLEVV 149
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI 155
+ A T NT L I F Y+SR+E++ AI+ ++
Sbjct: 150 ERAVAATSHNTTCVLNICFPYTSREEMTTAIRTTVEEY 187
Score = 92.3 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 160 VCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFS 218
+ + I K+L T+ P D+ +RT G +RLSDF+LWQ + F+ +WP+F
Sbjct: 262 PNAETITPETIDKHLYTAGCPPLDIFVRTSGVERLSDFMLWQCHQDTHIFFLKCFWPEFD 321
Query: 219 RELFFHALNQYNLRDR 234
F L ++ R +
Sbjct: 322 LWHFLPVLVEWQHRQK 337
>gi|327295398|ref|XP_003232394.1| prenyltransferase [Trichophyton rubrum CBS 118892]
gi|326465566|gb|EGD91019.1| prenyltransferase [Trichophyton rubrum CBS 118892]
Length = 429
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 51/158 (32%), Positives = 83/158 (52%), Gaps = 3/158 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ +MDGN R+A +G+ R GH G E +I+ GIK +TI
Sbjct: 31 LIGALRQGPIPQHVAFVMDGNRRFARNQGIERVEGHNLGFEALAKILEVCYSSGIKVVTI 90
Query: 61 FAFSINNWRRPVSEISELVKLIKSF---LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+++ K L + L++ VRV+G R + D+L +
Sbjct: 91 YAFSIENFKRSKYEVDALMEMAKLKLLQLSEHGELLERYGASVRVLGRRDQIRPDVLEAV 150
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI 155
+ T N L I F Y+SRDEI+ A++N +
Sbjct: 151 DRTVELTSGNGDAILNICFPYTSRDEITSAVRNTVMEY 188
Score = 93.1 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 160 VCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFS 218
+ + ++ ++ T+ P D++IRT G +RLSDF+LWQ ++ VF+ WP FS
Sbjct: 313 HSPETITTQTLSDHMLTAGCPPLDILIRTSGVERLSDFMLWQCHQDTQIVFLDTLWPAFS 372
Query: 219 RELFFHALNQYNLRDRRFG 237
F + + R R+ G
Sbjct: 373 LWEFLPVIWDWQRRIRKTG 391
>gi|213421851|ref|ZP_03354917.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
Length = 135
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 51/135 (37%), Positives = 78/135 (57%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA +G R GH+ G + V+ AA GI LT++AFS NW RP E+S
Sbjct: 1 MDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIDALTLYAFSSENWNRPAQEVSA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
L++L L SL ++N+++R+IG+ + + ++++E T NTGL L IA N
Sbjct: 61 LMELFVWALDSEVKSLHRHNVRLRIIGDISRFNSRLQERIRKSEALTAHNTGLTLNIAAN 120
Query: 138 YSSRDEISRAIKNIF 152
Y R +I + ++ +
Sbjct: 121 YGGRWDIVQGVRQLA 135
>gi|302923503|ref|XP_003053690.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256734631|gb|EEU47977.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 363
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 54/195 (27%), Positives = 98/195 (50%), Gaps = 13/195 (6%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ MDGN R+A + + GH G E I+ + G+K +T+
Sbjct: 30 LIGALKQGPIPQHVSFEMDGNRRYARSHRMETVEGHHHGFEALARIMEICYKCGVKVVTV 89
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N+ RP E+ L++L K L++ + L + +VRV+G R + D+L V+
Sbjct: 90 YAFSIENYNRPKYEVEGLMQLAKVKLEQLTNYGHILDRYGARVRVLGQREMIRADVLEVV 149
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI------ESGSVCSHDVDSSLIA 171
+A +T+ N L I F Y+SR E++ A+++ Q+ S + +++
Sbjct: 150 DKAVARTKHNNKAVLNICFPYTSRAEMTTAVRSTVQEFLAPTPPRSTPFSPSRIRQKILS 209
Query: 172 KYLDTSD----VPDP 182
+ LD + +PD
Sbjct: 210 RQLDGREGLPTIPDV 224
Score = 90.8 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 160 VCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFS 218
+ + + K++ T+ P D+ +RT G +RLSDF+LWQ ++ FI WPDF
Sbjct: 272 PNPETITAETLDKHMYTASDPPLDIFVRTSGVERLSDFMLWQCHQDTQIFFIDTLWPDFD 331
Query: 219 RELFFHALNQYNLRDR 234
F L ++ R +
Sbjct: 332 LHDFIWILLEWQWRQK 347
>gi|326476258|gb|EGE00268.1| prenyltransferase [Trichophyton tonsurans CBS 112818]
Length = 427
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 51/158 (32%), Positives = 83/158 (52%), Gaps = 3/158 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ +MDGN R+A +G+ R GH G E +I+ GIK +TI
Sbjct: 31 LIGALRQGPIPQHVAFVMDGNRRFARNQGIERVEGHNLGFEALAKILEVCYSSGIKVVTI 90
Query: 61 FAFSINNWRRPVSEISELVKLIKSF---LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+++ K L + L++ VRV+G R + D+L +
Sbjct: 91 YAFSIENFKRSKYEVDALMEMAKLKLLQLSEHGELLERYGASVRVLGRRDQIRPDVLEAV 150
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI 155
+ T N L I F Y+SRDEI+ A++N +
Sbjct: 151 DRTVELTSGNGDAILNICFPYTSRDEITSAVRNTVMEY 188
Score = 92.7 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 160 VCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFS 218
+ + ++ ++ T+ P D++IRT G +RLSDF+LWQ ++ VF+ WP FS
Sbjct: 311 HSPETITTQTLSDHMLTAGCPPLDILIRTSGVERLSDFMLWQCHQDTQIVFLDTLWPAFS 370
Query: 219 RELFFHALNQYNLRDRRFG 237
F + + R R+ G
Sbjct: 371 LWEFLPVIWDWQRRIRKTG 389
>gi|121707995|ref|XP_001271998.1| prenyltransferase, putative [Aspergillus clavatus NRRL 1]
gi|119400146|gb|EAW10572.1| prenyltransferase, putative [Aspergillus clavatus NRRL 1]
Length = 408
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 52/158 (32%), Positives = 82/158 (51%), Gaps = 3/158 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P HI +MDGN R+A + + GH G E I+ + G+K +TI
Sbjct: 31 LIGALRQGPVPQHIAFVMDGNRRFARSHRIETVEGHNLGFEALARILEVCYKCGVKVVTI 90
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+++ K L++ L + +VRV+G L D+L +
Sbjct: 91 YAFSIENFKRSKFEVDALMEMAKVKLQQMAQHGDLLDRYGARVRVLGRLDLLKPDVLAAV 150
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI 155
A D T N L I F Y+SRDEI+ AI++ D
Sbjct: 151 NRAVDMTSRNGDRVLNICFPYTSRDEITGAIRDTVADY 188
Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 161 CSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVA-YSEFVFIPEYWPDFSR 219
+ ++ ++ T P DL++RT G +RLSDF+LWQ +E VF+ WP+F
Sbjct: 296 SPETITRQTLSDHMLTKGNPPLDLLVRTSGVERLSDFMLWQCHEETEIVFLDVLWPEFDL 355
Query: 220 ELFFHALNQYNLR 232
F L + R
Sbjct: 356 WHFLPVLLGWQRR 368
>gi|312214381|emb|CBX94373.1| similar to undecaprenyl diphosphate synthase family protein
[Leptosphaeria maculans]
Length = 359
Score = 155 bits (393), Expect = 4e-36, Method: Composition-based stats.
Identities = 47/155 (30%), Positives = 76/155 (49%), Gaps = 3/155 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ S+ P H+ +MDGN R+A + GH G E I+ + G+K +TI
Sbjct: 30 LIGSLKQGPIPQHVAFVMDGNRRFARNHHIETVEGHNLGFESLARILEVCYKTGVKVVTI 89
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+ + K L++ L + VRV+G R + D+L +
Sbjct: 90 YAFSIENFKRSKHEVDALMSMAKVKLQQLAEHGALLDRYGASVRVLGQRALIQPDVLMAV 149
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIF 152
+A T N L + F Y+SR EI+ A+
Sbjct: 150 DKAVAMTAHNKKAVLNVCFPYTSRHEITTAVMKTV 184
Score = 88.1 bits (217), Expect = 9e-16, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 161 CSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVA-YSEFVFIPEYWPDFSR 219
+ + + + T+D P DL++RT G +RLSDF+LWQ + VF+ WP+F
Sbjct: 269 DPETITAQTLTDNMMTADAPPLDLLVRTSGVQRLSDFMLWQCHENTSIVFLKCLWPEFDL 328
Query: 220 ELFFHALNQYNLRDRR 235
F L ++ + ++
Sbjct: 329 WHFLPVLVEWQWQQKK 344
>gi|20387099|dbj|BAB91250.1| cis-prenyltransferase [Hevea brasiliensis]
Length = 198
Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats.
Identities = 44/198 (22%), Positives = 84/198 (42%), Gaps = 21/198 (10%)
Query: 15 GIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSE 74
IMDGN R+A + G+R ++ E+G+K TI+AF +N++ E
Sbjct: 1 AFIMDGNRRYAKKWNIAEATGYRAVFLAVMCMLKYCYELGVKYTTIYAFGYDNFKIRPEE 60
Query: 75 ISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
+ L+ L+ ++ + + ++V +G+ L++ + ++A T +T
Sbjct: 61 VQYLMDLMLEKIEGLIKQESIVNEYGVRVHFVGDLKLLNERVRVAAEKAMQATVNSTNST 120
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSH-------DVDSS-----------LIAKY 173
L I Y+S DEI A+++ + + ++ I ++
Sbjct: 121 LLICVAYTSTDEILHAVQSSCLEKWNEIQELDANQAQNGEITEEKQELKHIIKLVDIERH 180
Query: 174 LDTSDVPDPDLIIRTGGE 191
PDPD++IRT GE
Sbjct: 181 TYMGLAPDPDVLIRTSGE 198
>gi|258567684|ref|XP_002584586.1| saccharopine dehydrogenase [Uncinocarpus reesii 1704]
gi|237906032|gb|EEP80433.1| saccharopine dehydrogenase [Uncinocarpus reesii 1704]
Length = 769
Score = 155 bits (391), Expect = 7e-36, Method: Composition-based stats.
Identities = 52/158 (32%), Positives = 82/158 (51%), Gaps = 3/158 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ +MDGN R+A + R GH G E +I+ + G+K +TI
Sbjct: 31 LIGAIKQGPIPQHVAFVMDGNRRFARNHAIERVEGHNLGFEALAKILEVCYKAGVKVVTI 90
Query: 61 FAFSINNWRRPVSEISELVKLIKSF---LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+++ K L + L + VRV+G R + D+L +
Sbjct: 91 YAFSIENFKRSKFEVDALMEMAKVKLSQLSQHGDLLDRYGASVRVLGRRELVKADVLEAI 150
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI 155
A + T N L I F Y+SRDEI+ AI+N D
Sbjct: 151 DRAVEVTSRNGDAILNICFPYTSRDEITSAIRNTVIDY 188
Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 161 CSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVA--YSEFVF 209
+ + + +++ T+ P D+++RT G +RLSDF+LWQ + + + +F
Sbjct: 283 SPETISTQTLEEHMLTAGSPPLDVLVRTPGVERLSDFMLWQCSPGHRDHIF 333
>gi|302785998|ref|XP_002974771.1| hypothetical protein SELMODRAFT_414870 [Selaginella moellendorffii]
gi|300157666|gb|EFJ24291.1| hypothetical protein SELMODRAFT_414870 [Selaginella moellendorffii]
Length = 155
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 61/149 (40%), Positives = 90/149 (60%), Gaps = 3/149 (2%)
Query: 97 NIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIE 156
I V IG+ L + + + +++TR N GL L + +YS R ++ +A K + +++
Sbjct: 7 GICVHFIGDLSRLPGTLRLLACQIQERTRHNKGLKLVVGLSYSGRQDLVQACKAVAAEVQ 66
Query: 157 SGSVCSHDVDSSLIAKYLDT---SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEY 213
GSV ++D S + L T ++ DPDL+IRT GEKRLS+F+LWQ+AY+E VF+PE
Sbjct: 67 RGSVDLDEIDESKLESKLLTTWDEEISDPDLLIRTSGEKRLSNFMLWQLAYTELVFVPEL 126
Query: 214 WPDFSRELFFHALNQYNLRDRRFGGLSKK 242
WPDF + AL +Y RDRRFG K
Sbjct: 127 WPDFGENEYRVALAEYQERDRRFGRHQNK 155
>gi|46105340|ref|XP_380474.1| hypothetical protein FG00298.1 [Gibberella zeae PH-1]
Length = 363
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 9/187 (4%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ MDGN R+A + GH +G E I+ + G+K +T+
Sbjct: 30 LIGALKQGPIPQHVSFEMDGNRRYARNHRMEALEGHHRGFEALARIMEICYKSGVKVVTV 89
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFY---SLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N+ RP E+ L++L K+ L++ L + +VRV+G R + +D+L V+
Sbjct: 90 YAFSIENFNRPAREVEGLMELAKTKLEQLTKYGHILDRYGARVRVLGQREMIREDVLQVV 149
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI------ESGSVCSHDVDSSLIA 171
+A +TR N L I F Y+SR EI+ A+K+ Q+ S + +++
Sbjct: 150 DKAVARTRHNNKAVLNICFPYTSRAEITTAVKSTVQEFLAPSPPRSTPFSPSRIRRKILS 209
Query: 172 KYLDTSD 178
+ LD +
Sbjct: 210 RQLDDRE 216
Score = 91.5 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 160 VCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFS 218
+ + + K++ T++ P D+ +RT G +RLSDF+LWQ ++ FI WPDF
Sbjct: 272 PNPETITAETLDKHMYTANDPPLDIFVRTSGVERLSDFMLWQCHQDTQIFFIDTLWPDFD 331
Query: 219 RELFFHALNQYNLRDR 234
+ F L ++ R +
Sbjct: 332 LKDFIWILLEWQWRQK 347
>gi|325089868|gb|EGC43178.1| dehydrodolichyl diphosphate synthetase [Ajellomyces capsulatus H88]
Length = 411
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 3/158 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ +MDGN R+A + R GH G E +I+ + G+K +T+
Sbjct: 32 LIGALREGPIPQHVAFVMDGNRRFARNHQIERVEGHHLGFEALAKILEVCYKAGVKVVTV 91
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLK---KGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+ + + L + L + VRV+G R + ++L +
Sbjct: 92 YAFSIENFKRSKYEVDALMDMARVKLAQLSQHGDLLDRYGASVRVLGRRDLVKPEVLEAI 151
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI 155
+A + T N L I F Y+SRDE++ AI+N +
Sbjct: 152 DKAVEITSRNGDAILNICFPYTSRDEMTTAIRNTVTEY 189
Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 161 CSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVA-YSEFVFIPEYWPDFSR 219
+ + ++ T P DL++RT G +RLSDF+LWQ +E VF+ WP F
Sbjct: 292 SPETITQQTLTDHMLTVGCPPLDLLVRTSGVERLSDFMLWQCHQNTEVVFLETLWPSFDL 351
Query: 220 ELFFHALNQYNLRDRRFG 237
F L ++ R R+ G
Sbjct: 352 WTFLPVLWEWQWRVRKQG 369
>gi|240276271|gb|EER39783.1| dehydrodolichyl diphosphate synthetase [Ajellomyces capsulatus
H143]
Length = 411
Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 3/158 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ +MDGN R+A + R GH G E +I+ + G+K +T+
Sbjct: 32 LIGALREGPIPQHVAFVMDGNRRFARNHQIERVEGHHLGFEALAKILEVCYKAGVKVVTV 91
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLK---KGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+ + + L + L + VRV+G R + ++L +
Sbjct: 92 YAFSIENFKRSKYEVDALMDMARVKLAQLSQHGDLLDRYGASVRVLGRRDLVKPEVLEAI 151
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI 155
+A + T N L I F Y+SRDE++ AI+N +
Sbjct: 152 DKAVEITSRNGDAILNICFPYTSRDEMTTAIRNTVTEY 189
Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 161 CSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVA-YSEFVFIPEYWPDFSR 219
+ + ++ T P DL++RT G +RLSDF+LWQ +E VF+ WP F
Sbjct: 292 SPETITQQTLTDHMLTVGCPPLDLLVRTSGVERLSDFMLWQCHQNTEVVFLETLWPSFDL 351
Query: 220 ELFFHALNQYNLRDRRFG 237
F L ++ R R+ G
Sbjct: 352 WTFLPVLWEWQWRVRKQG 369
>gi|310798483|gb|EFQ33376.1| di-trans,poly-cis-decaprenylcistransferase [Glomerella graminicola
M1.001]
Length = 360
Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 51/183 (27%), Positives = 92/183 (50%), Gaps = 9/183 (4%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ MDGN R+A + + GH G E ++ + G+K +T+
Sbjct: 30 LIGALKQGPVPQHVAFEMDGNRRYARGKKMETIEGHHHGFEALARVLEICYKCGVKVVTV 89
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N+ RP E+ L++L K L++ L + VRV+G R + D+L V+
Sbjct: 90 YAFSIENFNRPQYEVDGLMQLAKVKLEQLTKHGDILDRYGAAVRVLGQRDLIRKDVLEVV 149
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI------ESGSVCSHDVDSSLIA 171
A D T+ N L I F Y++R+E++ AI++ Q+ + + + +++
Sbjct: 150 DRAVDMTKYNKRNVLNICFPYTAREEMTTAIRSTVQEYMMPPGPKFTPFPAARISQKIMS 209
Query: 172 KYL 174
K L
Sbjct: 210 KQL 212
Score = 90.4 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 161 CSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSR 219
+ + + ++ T+ P D+ +RT G +RLSDF+LWQ + F+ WPDF
Sbjct: 266 NPETITAETLNNHMYTAGNPPLDIFVRTSGVERLSDFMLWQCHQDTHIFFLKCLWPDFDL 325
Query: 220 ELFFHALNQYNLRDRR 235
+ F L ++ R ++
Sbjct: 326 QHFLPVLLEWQWRQKK 341
>gi|225559853|gb|EEH08135.1| dehydrodolichyl diphosphate synthetase [Ajellomyces capsulatus
G186AR]
Length = 412
Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 3/158 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ +MDGN R+A + R GH G E +I+ + G+K +T+
Sbjct: 32 LIGALREGPIPQHVAFVMDGNRRFARNHQIERVEGHHLGFEALAKILEVCYKAGVKVVTV 91
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLK---KGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+ + + L + L + VRV+G R + ++L +
Sbjct: 92 YAFSIENFKRSKYEVDALMDMARVKLAQLSQHGDLLDRYGASVRVLGRRDLVKPEVLEAI 151
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI 155
+A + T N L I F Y+SRDE++ AI+N +
Sbjct: 152 DKAVEITSRNGDAILNICFPYTSRDEMTTAIRNTVTEY 189
Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 161 CSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVA-YSEFVFIPEYWPDFSR 219
+ + ++ T P DL++RT G +RLSDF+LWQ +E VF+ WP F
Sbjct: 292 SPETITQQTLTDHMLTVGCPPLDLLVRTSGVERLSDFMLWQCHQNTEVVFLETLWPSFDL 351
Query: 220 ELFFHALNQYNLRDRRFG 237
F L ++ R R+ G
Sbjct: 352 WTFLPVLWEWQWRVRKQG 369
>gi|77410087|ref|ZP_00786620.1| undecaprenyl diphosphate synthase [Streptococcus agalactiae COH1]
gi|77171303|gb|EAO74639.1| undecaprenyl diphosphate synthase [Streptococcus agalactiae COH1]
Length = 138
Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 51/121 (42%), Positives = 69/121 (57%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
M P HIGIIMDGNGRWA R PR GH+ G++ E AA+E+G+K LT++AF
Sbjct: 11 EMPLEKIPAHIGIIMDGNGRWAKKRLKPRVMGHKAGMDALQEXTIAASELGVKVLTVYAF 70
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP E+ ++ L F K L KNN++V+VIG+ L ++ A +
Sbjct: 71 STENWSRPDDEVKFIMNLPVEFFDKYVPELDKNNVRVQVIGDTHKLPKATYDAMQRACLR 130
Query: 124 T 124
T
Sbjct: 131 T 131
>gi|302523388|ref|ZP_07275730.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. SPB78]
gi|318059747|ref|ZP_07978470.1| undecaprenyl diphosphate synthase [Streptomyces sp. SA3_actG]
gi|318075794|ref|ZP_07983126.1| undecaprenyl diphosphate synthase [Streptomyces sp. SA3_actF]
gi|302432283|gb|EFL04099.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. SPB78]
Length = 165
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 5/162 (3%)
Query: 82 IKSFLKKGFYSLKKNNIKVRVIGNRL-SLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSS 140
++ ++K L I+ R +G + + + + T N G+ L IAF++
Sbjct: 1 MRHTVRKHAPLLHARGIRCRFLGADDARVPEGLARDFADLTTLTAGNRGMTLTIAFDHGG 60
Query: 141 RDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLW 200
R +I A +++ V + +V A +L D PD DL+IRT GE+R+S+F+LW
Sbjct: 61 RGDIVAAARSLI----RAGVPAEEVTERSFAAHLPFPDTPDVDLVIRTSGEQRISNFMLW 116
Query: 201 QVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
QVAY+E+VF WPDF F L+ Y R+RRFGG+ +
Sbjct: 117 QVAYAEWVFPTVLWPDFRAPHFLECLHHYRHRERRFGGVPAQ 158
>gi|209881398|ref|XP_002142137.1| dehydrodolichyl diphophate synthase protein [Cryptosporidium muris
RN66]
gi|209557743|gb|EEA07788.1| dehydrodolichyl diphophate synthase protein, putative
[Cryptosporidium muris RN66]
Length = 284
Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats.
Identities = 62/263 (23%), Positives = 105/263 (39%), Gaps = 45/263 (17%)
Query: 11 PDHIGIIMDGNGRWAAARGLP-RCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P+H+ I+DGN R+A GH+KG EV I+ +GIK +++F FS +N+
Sbjct: 18 PNHVAFILDGNRRYARLHSFESVIDGHKKGAEVVLNIIPLLKSLGIKYVSLFIFSRDNFL 77
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
R E+ +++L+ K L N K+ + G+ L ++I +L E ++T+
Sbjct: 78 R-KGEVENMMELLHRNFHKEKQWLYNLNAKILISGDMNLLPENIKAILNEIVNETKDKNE 136
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSL-------------------- 169
+ L + YS EI +++ ++ D +
Sbjct: 137 MILNLCCAYSCSTEIETSLRTFSKEFVDIREDIKDNNHRNVMKSTKLGCITDRNKLFYVK 196
Query: 170 ----------------------IAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSE- 206
+ L +P P ++IRT GE RLSDFL +Q ++
Sbjct: 197 FEDLYDCDVDSHILNYKLKIREFWQCLYNPQIPPPKILIRTSGETRLSDFLFYQACFNTK 256
Query: 207 FVFIPEYWPDFSRELFFHALNQY 229
FI WP +R + Y
Sbjct: 257 IYFIETLWPAINRFTIIFVIIHY 279
>gi|325288645|ref|YP_004264826.1| Di-trans,poly-cis-decaprenylcistransferase [Syntrophobotulus
glycolicus DSM 8271]
gi|324964046|gb|ADY54825.1| Di-trans,poly-cis-decaprenylcistransferase [Syntrophobotulus
glycolicus DSM 8271]
Length = 194
Score = 152 bits (383), Expect = 5e-35, Method: Composition-based stats.
Identities = 55/210 (26%), Positives = 102/210 (48%), Gaps = 22/210 (10%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P+HIGII DGN RWA +GL + G+ G+ E++ + ++G+K LT + F+++N
Sbjct: 2 RIPNHIGIIPDGNRRWAQGKGLSKEKGYAYGLHPGLELLRLSQKLGVKELTFYGFTVDNT 61
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRL--SLDDDILCVLKEAEDQTRL 126
+RP ++ + + + + ++ + VIGN +++ + +
Sbjct: 62 KRPANQTKAFQQACI----EAIHCIADEDVSLLVIGNTESKMFPRELMPLTERKIF---G 114
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
G+ + NY +++ +++ Q S I L ++D+ DL+I
Sbjct: 115 QGGMKVNFLVNYGWEWDLANLLRDSAQ-------------ESGIISGLKSNDISRIDLVI 161
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPD 216
R GG +RLS FL Q Y++F + +YWPD
Sbjct: 162 RWGGRRRLSGFLPAQSVYADFFILDDYWPD 191
>gi|303311335|ref|XP_003065679.1| undecaprenyl diphosphate synthase family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240105341|gb|EER23534.1| undecaprenyl diphosphate synthase family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|320039524|gb|EFW21458.1| prenyltransferase [Coccidioides posadasii str. Silveira]
Length = 397
Score = 152 bits (383), Expect = 6e-35, Method: Composition-based stats.
Identities = 52/158 (32%), Positives = 82/158 (51%), Gaps = 3/158 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ +MDGN R+A + R GH G E +I+ + G+K +TI
Sbjct: 31 LIGALKQGPIPQHVAFVMDGNRRFARNHAIERVEGHNLGFEALAKILEVCYKAGVKVVTI 90
Query: 61 FAFSINNWRRPVSEISELVKLIKSF---LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+++ K L + L + VRV+G R + D+L +
Sbjct: 91 YAFSIENFKRSKFEVDALMEMAKVKLSQLSQHGDLLDRYGASVRVLGRRELVKADVLEAI 150
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI 155
A + T N L I F Y+SRDEI+ AI+N D
Sbjct: 151 DRAVELTSRNGDAILNICFPYTSRDEITSAIRNTVIDY 188
Score = 93.1 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 161 CSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSR 219
+ + + ++ T+D P DL+IRT G +RLSDF+LWQ ++ +F+ WP F
Sbjct: 280 SPETISTQTLDDHMLTADSPPLDLLIRTSGVERLSDFMLWQCHEDTDIIFLDTLWPSFGL 339
Query: 220 ELFFHALNQYNLRDRRFGG 238
F L ++ R R+ G
Sbjct: 340 WDFLPVLWEWQWRVRKQGR 358
>gi|255027466|ref|ZP_05299452.1| undecaprenyl diphosphate synthase [Listeria monocytogenes FSL
J2-003]
Length = 112
Score = 152 bits (383), Expect = 6e-35, Method: Composition-based stats.
Identities = 54/112 (48%), Positives = 71/112 (63%)
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
TGL L A NY R EI A K +++E + D+ + +L +S + DPDL+IR
Sbjct: 1 TGLTLNFALNYGGRSEIITAAKEAMKELELEGKSADDLTEEKLNDHLMSSGLGDPDLLIR 60
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
T GE RLS+F+LWQ+AYSEF F +WPDFS+E F A+ +Y R RRFGGL
Sbjct: 61 TSGELRLSNFMLWQLAYSEFYFTDTHWPDFSKEDFLQAIIEYQNRSRRFGGL 112
>gi|260899615|ref|ZP_05908010.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio parahaemolyticus
AQ4037]
gi|308108744|gb|EFO46284.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio parahaemolyticus
AQ4037]
Length = 146
Score = 151 bits (382), Expect = 8e-35, Method: Composition-based stats.
Identities = 49/137 (35%), Positives = 82/137 (59%)
Query: 106 RLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV 165
+ + + EAE+ T NTG+ + IA NY + +I+ A K + +G + D+
Sbjct: 2 TSRFSERLQKKIVEAENLTASNTGMVINIAANYGGKWDITEAAKALALKARNGEIRVEDI 61
Query: 166 DSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHA 225
+ LI ++L +D+P+ DL+IRT GE R+S+F+LWQ+AY+E F PE+WP+F + A
Sbjct: 62 NEQLITEHLTMADLPEVDLLIRTSGECRISNFMLWQMAYAEMYFTPEFWPEFDEDSLVEA 121
Query: 226 LNQYNLRDRRFGGLSKK 242
+ + R+RRFG ++
Sbjct: 122 VTWFINRERRFGCTGEQ 138
>gi|295669340|ref|XP_002795218.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
gi|226285152|gb|EEH40718.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
Length = 404
Score = 151 bits (381), Expect = 8e-35, Method: Composition-based stats.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 3/158 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M+ ++ P H+ +MDGN R+A + + GH G E +I+ + G++ +T+
Sbjct: 27 MIGALREGPVPQHVAFVMDGNRRFARHHRIEKLEGHNLGFEALAKILEVCYKAGVRVVTV 86
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLK---KGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+ + + L + L + VRV+G R L ++L +
Sbjct: 87 YAFSIENFKRSKYEVDALMDMARVKLAQLSQHGDLLDRYGASVRVLGRRDLLKPEVLEAI 146
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI 155
+A + T N L I F Y+SRDEI+ AI++ +
Sbjct: 147 DKAVELTSRNGDAILNICFPYTSRDEITTAIRDTVIEY 184
Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 161 CSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVA-YSEFVFIPEYWPDFSR 219
+ S I ++ T+ P DL+IRT G +RLSDF+LWQ +E VF+ WP+F
Sbjct: 286 SPETITSQTITDHMLTAGCPALDLLIRTSGVERLSDFMLWQCHQGTEIVFLDTLWPNFDL 345
Query: 220 ELFFHALNQYNLRDRR 235
F L ++ R R+
Sbjct: 346 WTFLPVLWEWQWRIRK 361
>gi|225682657|gb|EEH20941.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 409
Score = 151 bits (381), Expect = 9e-35, Method: Composition-based stats.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 3/158 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M+ ++ P H+ +MDGN R+A + + GH G E +I+ + G++ +T+
Sbjct: 32 MIGALREGPVPQHVAFVMDGNRRFARHHRIEKLEGHNLGFEALAKILEVCYKAGVRVVTV 91
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLK---KGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+ + + L + L + VRV+G R L ++L +
Sbjct: 92 YAFSIENFKRSKYEVDALMDMARVKLAQLSQHGDLLDRYGASVRVLGRRDLLKPEVLEAI 151
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI 155
+A + T N L I F Y+SRDEI+ AI++ +
Sbjct: 152 DKAVELTSRNGDAILNICFPYTSRDEITTAIRDTVIEY 189
Score = 88.8 bits (219), Expect = 6e-16, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 161 CSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSR 219
+ S I ++ T+ P D++IRT G +RLSDF+LWQ +E VF+ WP+F
Sbjct: 291 SPETITSQTITDHMLTAGCPALDILIRTSGVERLSDFMLWQCHQDTEIVFLDTLWPNFDL 350
Query: 220 ELFFHALNQYNLRDRR 235
F L ++ R R+
Sbjct: 351 WTFLPVLWEWQWRIRK 366
>gi|226290086|gb|EEH45570.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 404
Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 3/158 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M+ ++ P H+ +MDGN R+A + + GH G E +I+ + G++ +T+
Sbjct: 27 MIGALREGPVPQHVAFVMDGNRRFARHHRIEKLEGHNLGFEALAKILEVCYKAGVRVVTV 86
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLK---KGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+ + + L + L + VRV+G R L ++L +
Sbjct: 87 YAFSIENFKRSKYEVDALMDMARVKLAQLSQHGDLLDRYGASVRVLGRRDLLKPEVLEAI 146
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI 155
+A + T N L I F Y+SRDEI+ AI++ +
Sbjct: 147 DKAVELTSRNGDAILNICFPYTSRDEITTAIRDTVIEY 184
Score = 90.0 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 161 CSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSR 219
+ S I ++ T+ P DL+IRT G +RLSDF+LWQ +E VF+ WP+F
Sbjct: 286 SPETITSQTITDHMLTAGCPALDLLIRTSGVERLSDFMLWQCHQDTEIVFLDTLWPNFDL 345
Query: 220 ELFFHALNQYNLRDRR 235
F L ++ R R+
Sbjct: 346 WTFLPVLWEWQWRIRK 361
>gi|145630004|ref|ZP_01785786.1| UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
[Haemophilus influenzae R3021]
gi|144984285|gb|EDJ91708.1| UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
[Haemophilus influenzae R3021]
Length = 180
Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 46/123 (37%), Positives = 70/123 (56%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ ++ P H+ IIMDGNGRWA + R GH G+ + VA A ++G++ LT++AF
Sbjct: 3 ELDQTNIPKHVAIIMDGNGRWAKQKNKMRIFGHTNGVTAVRKAVAYARQIGVEVLTLYAF 62
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
S NW RP EIS L+ L L + L KNNI +++IG+ + + +K+AE+
Sbjct: 63 SSENWSRPEQEISTLMSLFMQALDREVKKLHKNNICLKIIGDVSRFSETLQEKIKKAENL 122
Query: 124 TRL 126
T
Sbjct: 123 TEK 125
>gi|261191681|ref|XP_002622248.1| prenyltransferase [Ajellomyces dermatitidis SLH14081]
gi|239589564|gb|EEQ72207.1| prenyltransferase [Ajellomyces dermatitidis SLH14081]
gi|239608690|gb|EEQ85677.1| prenyltransferase [Ajellomyces dermatitidis ER-3]
Length = 412
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 46/158 (29%), Positives = 82/158 (51%), Gaps = 3/158 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ +MDGN R+A + + GH G E +I+ + G+K +T+
Sbjct: 32 LIGALREGPIPQHVAFVMDGNRRFARNHRIEKVEGHNLGFEALAKILEVCYKAGVKVVTV 91
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLK---KGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+ + + L + L + VRV+G R + ++L +
Sbjct: 92 YAFSIENFKRSKYEVDALMDMARVKLAQLSQHGDLLDRYGASVRVLGRRDLVKPEVLEAI 151
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI 155
+A + T N L I F Y+SRDE++ AI+N +
Sbjct: 152 DKAVELTSRNGDAILNICFPYTSRDEMTTAIRNTVIEY 189
Score = 92.3 bits (228), Expect = 6e-17, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 161 CSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVA-YSEFVFIPEYWPDFSR 219
+ + ++ T+ P DL++RT G +RLSDF+LWQ +E VF+ WP F
Sbjct: 292 SPETITQQTLTDHMLTAGCPPLDLLVRTSGVERLSDFMLWQCHQNTEIVFLDILWPSFDL 351
Query: 220 ELFFHALNQYNLRDRRFGG 238
F L ++ R R+ GG
Sbjct: 352 WTFLPVLWEWQWRVRKQGG 370
>gi|327357575|gb|EGE86432.1| prenyltransferase [Ajellomyces dermatitidis ATCC 18188]
Length = 412
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 46/158 (29%), Positives = 82/158 (51%), Gaps = 3/158 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ +MDGN R+A + + GH G E +I+ + G+K +T+
Sbjct: 32 LIGALREGPIPQHVAFVMDGNRRFARNHRIEKVEGHNLGFEALAKILEVCYKAGVKVVTV 91
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLK---KGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E+ L+ + + L + L + VRV+G R + ++L +
Sbjct: 92 YAFSIENFKRSKYEVDALMDMARVKLAQLSQHGDLLDRYGASVRVLGRRDLVKPEVLEAI 151
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI 155
+A + T N L I F Y+SRDE++ AI+N +
Sbjct: 152 DKAVELTSRNGDAILNICFPYTSRDEMTTAIRNTVIEY 189
Score = 91.9 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 161 CSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVA-YSEFVFIPEYWPDFSR 219
+ + ++ T+ P DL++RT G +RLSDF+LWQ +E VF+ WP F
Sbjct: 292 SPETITQQTLTDHMLTAGCPPLDLLVRTSGVERLSDFMLWQCHQNTEIVFLDILWPSFDL 351
Query: 220 ELFFHALNQYNLRDRRFGG 238
F L ++ R R+ GG
Sbjct: 352 WTFLPVLWEWQWRVRKQGG 370
>gi|56206240|emb|CAI21492.1| dehydrodolichyl diphosphate synthase [Homo sapiens]
gi|119628212|gb|EAX07807.1| dehydrodolichyl diphosphate synthase, isoform CRA_b [Homo sapiens]
Length = 240
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 53/145 (36%), Positives = 84/145 (57%)
Query: 86 LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEIS 145
L + L+K+ + +RV+G+ L D+ ++ +A T+ L + F Y+SR EIS
Sbjct: 11 LMEEKEKLQKHGVCIRVLGDLHLLPLDLQELIAQAVQATKNYNKCFLNVCFAYTSRHEIS 70
Query: 146 RAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYS 205
A++ + +E G + D+ SL+ K L T+ P PD++IRT GE RLSDFLLWQ ++S
Sbjct: 71 NAVREMAWGVEQGLLDPSDISESLLDKCLYTNRSPHPDILIRTSGEVRLSDFLLWQTSHS 130
Query: 206 EFVFIPEYWPDFSRELFFHALNQYN 230
VF P WP+++ F A+ Q+
Sbjct: 131 CLVFQPVLWPEYTFWNLFEAILQFQ 155
>gi|322710526|gb|EFZ02100.1| undecaprenyl diphosphate synthase family protein [Metarhizium
anisopliae ARSEF 23]
Length = 357
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 53/187 (28%), Positives = 92/187 (49%), Gaps = 16/187 (8%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ MDGN R+A + + GH +G E G+K +T+
Sbjct: 29 LIGALRQGPVPQHVAFEMDGNRRYARSHRMETVEGHHRGFEALARC-------GVKVITV 81
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFS+ N+ RP E+ L++L K L++ L + VRV+G R + +D+L V+
Sbjct: 82 YAFSVENYNRPKHEVEGLMQLAKVKLEQLTTYGDILDRYGACVRVLGQREMIREDVLKVV 141
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI------ESGSVCSHDVDSSLIA 171
+A +T+ N L I F Y+SR EI+ AI+N QD ++ + +++
Sbjct: 142 DKAVARTKHNNKTVLNICFPYTSRAEITTAIRNTVQDFLNPPPPKNTPFSPSRIRQKILS 201
Query: 172 KYLDTSD 178
LD +
Sbjct: 202 SQLDGKE 208
Score = 88.1 bits (217), Expect = 9e-16, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 160 VCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFS 218
+ + + ++ T+ P +L +RT G +RLSDF+LWQ ++ VFI WPDF
Sbjct: 262 PNPESITTDTLNDHMYTASDPPLELFVRTSGVERLSDFMLWQCHQDTQIVFIDCLWPDFD 321
Query: 219 RELFFHALNQYNLRDR 234
+ F + ++ R +
Sbjct: 322 LQHFIWVMLEWQWRQK 337
>gi|320591879|gb|EFX04318.1| dehydrodolichyl diphosphate synthase [Grosmannia clavigera kw1407]
Length = 354
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 7/202 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P HI MDGN R+A + GH G E +++ + G+K +T+
Sbjct: 30 LIGALSQGPIPQHISFEMDGNRRYAKMHKIEAIEGHHLGFEALAKVLEICYKCGVKVVTV 89
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N+ RP E+ L++L K L++ L + + VRV G R + D+L V+
Sbjct: 90 YAFSIENYHRPQYEVDGLMELAKVKLQQLMQHGAVLDRYGVSVRVQGQRDLIRADVLEVV 149
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI-ESGSVCSHDVDSSLIAKYLDT 176
+ T+ N L I F Y+SR+EIS++I+N + + + I + + +
Sbjct: 150 HRIVETTKHNARATLNICFPYTSREEISQSIRNTVSEYSSPPRPQNTPFSQARIKQTILS 209
Query: 177 SDVPDPDLI--IR-TGGEKRLS 195
+ P+L+ IR T +S
Sbjct: 210 KQLDRPELLSTIRETSPAPSVS 231
Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 160 VCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVA-YSEFVFIPEYWPDFS 218
+ + I ++ + P D+ +RT G +RLSDF+LWQ +E F+ +WP+F
Sbjct: 264 PNPEAITAETIDSHMYITGDPPLDIFVRTSGVERLSDFMLWQCHQNTEIFFLKCFWPEFD 323
Query: 219 RELFFHALNQYNLRDR 234
F L ++ R +
Sbjct: 324 LYHFLPVLVEWQRRQK 339
>gi|23004445|ref|ZP_00047773.1| COG0020: Undecaprenyl pyrophosphate synthase [Magnetospirillum
magnetotacticum MS-1]
Length = 124
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 63/123 (51%), Positives = 83/123 (67%)
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E +TR NTGL L +AFNY R EI RA++ I Q + G + ++ IA LDT+ +P
Sbjct: 1 ETRTRANTGLTLVVAFNYGGRQEILRAVRRIAQAVAEGRLRPEEIGLPTIADALDTAGIP 60
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
DPDL+IRT GE+RLS+FL WQ AY+E+V P +WPDF F A+++Y+ RDRRFGGLS
Sbjct: 61 DPDLVIRTSGEQRLSNFLTWQTAYAEYVIEPGFWPDFDHAAFLAAVDEYHRRDRRFGGLS 120
Query: 241 KKG 243
Sbjct: 121 AGA 123
>gi|242769358|ref|XP_002341752.1| prenyltransferase, putative [Talaromyces stipitatus ATCC 10500]
gi|218724948|gb|EED24365.1| prenyltransferase, putative [Talaromyces stipitatus ATCC 10500]
Length = 385
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 3/158 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P HI +MDGN R+A + G+ GH G E I+ + G+K +TI
Sbjct: 31 LLGALRQGPIPQHIAFVMDGNRRFARSHGIETIEGHHLGFEALARILEVCYKSGVKVVTI 90
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N+ R E++ L+ + L + L + +R +G + L D++ +
Sbjct: 91 YAFSIENFNRSQFEVNGLMDMANVKLAQLAQHGDILDRYGASIRFLGRKDLLRPDVVAAV 150
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI 155
A + T N L I Y+SRDEI++AI+ D
Sbjct: 151 DRAVEVTSRNGDRVLNICCPYTSRDEITQAIRQTVIDY 188
Score = 90.0 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 161 CSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSR 219
+ + + + T + P D++IRT G +RLSDF+LWQ +E F+ WP+F
Sbjct: 277 SPEFITPQTLTERMYTGNNPPIDILIRTSGVERLSDFMLWQCHEDTELAFLDVLWPEFDL 336
Query: 220 ELFFHALNQYNLR 232
F L ++ R
Sbjct: 337 WHFLPVLWKWQRR 349
>gi|212542253|ref|XP_002151281.1| prenyltransferase, putative [Penicillium marneffei ATCC 18224]
gi|210066188|gb|EEA20281.1| prenyltransferase, putative [Penicillium marneffei ATCC 18224]
Length = 387
Score = 148 bits (375), Expect = 4e-34, Method: Composition-based stats.
Identities = 46/158 (29%), Positives = 77/158 (48%), Gaps = 3/158 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P HI +MDGN R+A G+ GH G E I+ + G+K +TI
Sbjct: 31 LLGALRQGPIPQHIAFVMDGNRRFAKTHGIETIEGHHLGFEALARILEVCYKSGVKVVTI 90
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N+ R E++ L+ + L + L + +R +G + L D++ +
Sbjct: 91 YAFSIENFNRSQFEVNGLMDMANVKLAQLAQHGDILDRYGASIRFLGRKDLLRPDVVAAV 150
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI 155
A + T N L I Y+SRDE+++AI+ D
Sbjct: 151 DRAVELTSRNGDKILNICCPYTSRDEMTQAIRQTVVDY 188
Score = 90.0 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 161 CSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSR 219
S + S + + T P D+++RT G +RLSDF+LWQ +E F+ WP+F
Sbjct: 279 SSESITSQTLTDRMYTGGNPPIDILVRTSGVERLSDFMLWQCHEDTEIAFLDVLWPEFDL 338
Query: 220 ELFFHALNQYNLR 232
F L ++ R
Sbjct: 339 WHFLPVLWKWQRR 351
>gi|315042888|ref|XP_003170820.1| dehydrodolichyl diphosphate synthase [Arthroderma gypseum CBS
118893]
gi|311344609|gb|EFR03812.1| dehydrodolichyl diphosphate synthase [Arthroderma gypseum CBS
118893]
Length = 416
Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 22/201 (10%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAA----EVGIK 56
++ ++ P H+ +MDGN R+A +G+ R GH G E ++ + + GIK
Sbjct: 31 LIGALRQGPIPQHVAFVMDGNRRFARNQGIERVEGHNLGFEALAKVFPFSFVIQTDSGIK 90
Query: 57 NLTIFAFSINNWRRPVSEISELVKLIKSF---LKKGFYSLKKNNIKVRVIGNRLSLDDDI 113
+TI+AFSI N++R E+ L+++ K L + L++ VRV+G R + D+
Sbjct: 91 VVTIYAFSIENFKRSKYEVDALMEMAKLKLLQLSEHGELLERYGASVRVLGRRDQIRPDV 150
Query: 114 LCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKY 173
L + + T N L I F Y+SRDEI+ A++N + +
Sbjct: 151 LEAVDRTVELTSGNGDAILNICFPYTSRDEITSAVRNTVVEY---------------STP 195
Query: 174 LDTSDVPDPDLIIRTGGEKRL 194
LD S +P + R EKR+
Sbjct: 196 LDRSQLPAVNSPRRPFSEKRI 216
Score = 91.9 bits (227), Expect = 8e-17, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 160 VCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVA-YSEFVFIPEYWPDFS 218
+ + + ++ T+ P D++IRT G +RLSDF+LWQ ++ +F+ WP FS
Sbjct: 300 HSPETIATQTLNDHMLTAGCPPLDILIRTSGVERLSDFMLWQCHQETQIIFLDTLWPAFS 359
Query: 219 RELFFHALNQYNLRDRRFG 237
F + + R R+ G
Sbjct: 360 LWEFLPVIWDWQRRIRKTG 378
>gi|300708517|ref|XP_002996436.1| hypothetical protein NCER_100483 [Nosema ceranae BRL01]
gi|239605738|gb|EEQ82765.1| hypothetical protein NCER_100483 [Nosema ceranae BRL01]
Length = 281
Score = 148 bits (373), Expect = 7e-34, Method: Composition-based stats.
Identities = 59/224 (26%), Positives = 93/224 (41%), Gaps = 36/224 (16%)
Query: 14 IGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVS 73
I I DGN R+ G++ EI+ + I + + FSI N++R
Sbjct: 89 IAFIADGNRRYLKKMNKDIEQVKEDGLKRIKEIIEFCNQFNIPEVGFYCFSIKNFKRSDK 148
Query: 74 EISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLF 133
E+ +++L+ + N KVRVIGN L I +++ E T+ NTG+ +
Sbjct: 149 EVQNVLQLLTY-------NPYITNYKVRVIGNLDLLPPAIGENMRKLEISTKNNTGIIVN 201
Query: 134 IAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKR 193
+ YS++DE+ IK + DLI+RT GEKR
Sbjct: 202 LFIAYSTQDEVENGIKFTG----------------------------EVDLIVRTSGEKR 233
Query: 194 LSDFLLWQ-VAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
LSDFL+ Q + F WP+ + + + +Y L F
Sbjct: 234 LSDFLILQCCRGTNIFFCDFLWPEITLVHLYLIMLKYKLEQIFF 277
>gi|291446618|ref|ZP_06586008.1| undecaprenyl pyrophosphate synthetase 1 [Streptomyces roseosporus
NRRL 15998]
gi|291349565|gb|EFE76469.1| undecaprenyl pyrophosphate synthetase 1 [Streptomyces roseosporus
NRRL 15998]
Length = 235
Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 56/236 (23%), Positives = 97/236 (41%), Gaps = 11/236 (4%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT--IFAFSINNW 68
P H+ +++DG ++A +G+ +R G EI G +T I + +
Sbjct: 3 PRHVAVLLDGLAQFAEEQGVSEAMAYRAGCAKQLEIARWCHARGAGTVTLEILPPTHTDP 62
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
++ +E ++ FL +I + +G+ L + + + + T
Sbjct: 63 HEDIAADAEWAAVLDDFL---VGWDGARDIALNHLGDPARLPVKLADRFRASAARRDAAT 119
Query: 129 G--LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLDTSDVPDP 182
+ +A Y EI A++ ++ DV D + L + +P
Sbjct: 120 QGSFQVNLALGYDGHGEILDAVRATLHQAQADGRGLTDVAAALDVESLETQLASGPLPPV 179
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DLIIR GG + LS FLLWQ AY+EF F P +++ A Y R+RR+G
Sbjct: 180 DLIIRAGGGQYLSGFLLWQSAYAEFYFSGTPAPALTQDDLTAAFADYARRNRRYGK 235
>gi|154287464|ref|XP_001544527.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150408168|gb|EDN03709.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 407
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 3/158 (1%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P H+ +MDGN R+A + R GH G E +I+ + G+K +T+
Sbjct: 27 LIGALREGPIPQHVAFVMDGNRRFARNHQIERVEGHHLGFEALAKILKMCYKAGVKGVTV 86
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLK---KGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+AFSI N++R E L+ + + L + L + VRV+G R + ++L +
Sbjct: 87 YAFSIENFKRAKYEGDALMDMGRVKLAQLSQHGDLLDRYGASVRVLGRRDLVKPEVLEAI 146
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI 155
+A + T N L I F Y+SRDE++ AI+N +
Sbjct: 147 DKAVEITSQNGDAVLNICFPYTSRDEMTTAIRNTVTEY 184
Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 161 CSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVA-YSEFVFIPEYWPDFSR 219
+ + ++ T P DL++RT G +RLSDF+LWQ +E VF+ WP F
Sbjct: 287 SPETITQQTLTDHMLTVGCPPLDLLVRTSGVERLSDFMLWQCHQNTEVVFLETLWPSFDL 346
Query: 220 ELFFHALNQYNLRDRRFG 237
F L ++ R R+ G
Sbjct: 347 WTFLPVLWEWQWRVRKQG 364
>gi|169606342|ref|XP_001796591.1| hypothetical protein SNOG_06208 [Phaeosphaeria nodorum SN15]
gi|160706970|gb|EAT86039.2| hypothetical protein SNOG_06208 [Phaeosphaeria nodorum SN15]
Length = 377
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 46/191 (24%), Positives = 80/191 (41%), Gaps = 19/191 (9%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNE--------------- 45
++ S+ P H+ +MDGN R+A + GH G E
Sbjct: 30 LIGSLKQGPIPQHVAFVMDGNRRFARNHHIETVEGHNLGFESLARVRNGLVSALFHTNPS 89
Query: 46 -IVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYS---LKKNNIKVR 101
I+ + G+K +T++AFSI N++R E+ L+ + K L++ L + +R
Sbjct: 90 KILEVCYKTGVKVVTVYAFSIENFKRSKHEVDALMSMAKVKLEQIAEHGALLDRYGASIR 149
Query: 102 VIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVC 161
V+G R + D+L + A T N L + F Y+SRDEI+ A+ + +
Sbjct: 150 VLGQRDLMRKDVLAAVDTAVAMTAHNKKAVLNVCFPYTSRDEITTAVMKTVETYSTPIHN 209
Query: 162 SHDVDSSLIAK 172
++
Sbjct: 210 LPTPSKRTFSE 220
Score = 86.1 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 42/182 (23%), Positives = 73/182 (40%), Gaps = 25/182 (13%)
Query: 55 IKNLTIFAFSINNW----RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLD 110
+K + ++ I+N +R SE + K L + + G+R
Sbjct: 197 MKTVETYSTPIHNLPTPSKRTFSESHITQHIRKQMLGDDVEAGAEQP------GSRSMSP 250
Query: 111 DDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLI 170
K+A + T + A N S +D+ + E+ + + + +
Sbjct: 251 S-----SKDASNLTEDELSSSTSTAINPSEKDD---------SNDEAAFLDPESICAQTL 296
Query: 171 AKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVA-YSEFVFIPEYWPDFSRELFFHALNQY 229
+ T+D P DL+IRT G +RLSDF+LWQ + VF+ WP+F F L ++
Sbjct: 297 TDNMMTADSPPLDLLIRTSGVERLSDFMLWQCHENTSIVFLKCLWPEFDLWQFLPVLVEW 356
Query: 230 NL 231
Sbjct: 357 QW 358
>gi|58375626|ref|XP_307411.2| Anopheles gambiae str. PEST AGAP012908-PA [Anopheles gambiae str.
PEST]
gi|55247443|gb|EAA45968.2| AGAP012908-PA [Anopheles gambiae str. PEST]
Length = 181
Score = 145 bits (367), Expect = 4e-33, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + + P H+ IMDGN R+A + + GH G E +E + EVGI +T++
Sbjct: 44 IRVLQAGPIPRHVAFIMDGNRRYARKANIAKAEGHSAGFEKLSETLQWCLEVGITEVTVY 103
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKK---GFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
AFSI N++R E+ L+ L + ++ L + I +R+IGN L+ DI +
Sbjct: 104 AFSIENFKRTQEEVDTLMNLARDKFQRLLAERDKLHERGICIRIIGNWDLLEPDIRRSIA 163
Query: 119 EAEDQTRLNTGLNLFIAF 136
EA TR N L +AF
Sbjct: 164 EAVLLTRHNRKAILNVAF 181
>gi|167966591|ref|ZP_02548868.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis H37Ra]
Length = 163
Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats.
Identities = 51/154 (33%), Positives = 75/154 (48%), Gaps = 4/154 (2%)
Query: 89 GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAI 148
N+ VR +G+ + ++ L+ A + T ++ +A Y R EI A+
Sbjct: 10 EEICAPANHWSVRTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAV 69
Query: 149 KNIFQDIESGSVCSHD----VDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY 204
+ + + + + V I++ L TS PDPDL+IRT GE+RLS FLLWQ AY
Sbjct: 70 RALLSKELANGATAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAY 129
Query: 205 SEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
SE F +WP F F AL Y+ R R +G
Sbjct: 130 SEMWFTEAHWPAFRHVDFLRALRDYSARHRSYGR 163
>gi|85014491|ref|XP_955741.1| undecaprenyl pyrophosphatase synthetase [Encephalitozoon cuniculi
GB-M1]
gi|74630068|sp|Q8SQJ8|RER2_ENCCU RecName: Full=Dehydrodolichyl diphosphate synthase; Short=DEDOL-PP
synthase
gi|19171435|emb|CAD27160.1| UNDECAPRENYL PYROPHOSPHATE SYNTHETASE [Encephalitozoon cuniculi
GB-M1]
Length = 270
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 31/216 (14%)
Query: 14 IGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVS 73
I I DGN R+A GL KG++ E + GIK ++ F F+++N++R
Sbjct: 75 IAFICDGNRRYARKLGLEDSFIKDKGLQKIYEFIEFGCFYGIKEISFFCFALSNFKRSPE 134
Query: 74 EISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLF 133
E+++L+ L+K + K RV G L++D+ L + E++++ NT + +
Sbjct: 135 EVNKLMGLVKQKI--ERPKEIGIRPKFRVYGRLDLLEEDVRKRLMDIEEESKNNTSIIVN 192
Query: 134 IAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKR 193
I F YS+ DEI+R I+ D++IRT KR
Sbjct: 193 IFFAYSAEDEITRGIQFNSH----------------------------VDILIRTSNTKR 224
Query: 194 LSDFLLWQVA-YSEFVFIPEYWPDFSRELFFHALNQ 228
LS+F++ QVA + F WP+ + F L +
Sbjct: 225 LSNFMIRQVAKGTSVFFAKALWPELTTAHLFLILLK 260
>gi|255582905|ref|XP_002532224.1| undecaprenyl diphosphate synthase, putative [Ricinus communis]
gi|223528081|gb|EEF30155.1| undecaprenyl diphosphate synthase, putative [Ricinus communis]
Length = 363
Score = 144 bits (364), Expect = 8e-33, Method: Composition-based stats.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 3/162 (1%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P H+ IMDGN R+ L AG+R G ++ E+G+K++TIFAF
Sbjct: 20 LRMGPIPSHLSFIMDGNRRFTKKENLKPGAGYRAGFLALMSMLKYCYELGVKHVTIFAFG 79
Query: 65 INNWRRPVSEISELVKLIKSF---LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I+N++R E+ ++ LI L K + + I+V IGN LD+ + ++
Sbjct: 80 IDNFKRRPDEVRFIMDLILEKTLGLLKEESIVHQYGIRVHFIGNLKLLDEPLRVAAEKVT 139
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSH 163
T NT L I YSS +EI+ A++ ++ + S+
Sbjct: 140 RTTSSNTKFVLLICVAYSSTNEITHAVQQYCKEKWNEIEPSN 181
Score = 77.7 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 36/89 (40%)
Query: 142 DEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQ 201
I I + + + K++ + PDPD++IRT GE RLS+FLLWQ
Sbjct: 262 WSIRTGDSGIRDEEREKMQSHSIIKQVDLEKHMPMAVAPDPDILIRTSGETRLSNFLLWQ 321
Query: 202 VAYSEFVFIPEYWPDFSRELFFHALNQYN 230
+ WPD A+ +
Sbjct: 322 AGDCQGYSPDALWPDIVLRQLVWAVLNFQ 350
>gi|329942495|ref|ZP_08291305.1| di-trans,poly-cis-decaprenylcistransferase [Chlamydophila psittaci
Cal10]
gi|328815405|gb|EGF85393.1| di-trans,poly-cis-decaprenylcistransferase [Chlamydophila psittaci
Cal10]
Length = 173
Score = 144 bits (364), Expect = 9e-33, Method: Composition-based stats.
Identities = 56/162 (34%), Positives = 88/162 (54%), Gaps = 4/162 (2%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARG----LPRCAGHRKGIEVFNEIVAAAAEVGIKNL 58
AS+ S P H+ IIMDGN RW + R +GH G +V +I+ +A +GI+ L
Sbjct: 11 ASLSMQSLPKHVAIIMDGNRRWYQQHQTQCSVKRSSGHYYGAKVLPKIIESAFSLGIEVL 70
Query: 59 TIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
T+FAFS N+ R E++EL L S L + L +N I++R IGN L+L + +
Sbjct: 71 TLFAFSTENFLRSAEEVAELFSLFHSQLDEQLPYLIENKIRLRCIGNLLALPHYLQKQIS 130
Query: 119 EAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSV 160
+ ++T+ + L +A NY +DE+ RA K + D+ +
Sbjct: 131 KVAEETQGHGIRELVLAINYGGKDELVRAFKKLHHDLVNKKY 172
>gi|255582903|ref|XP_002532223.1| undecaprenyl diphosphate synthase, putative [Ricinus communis]
gi|223528080|gb|EEF30154.1| undecaprenyl diphosphate synthase, putative [Ricinus communis]
Length = 370
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 6/173 (3%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P H+ +IMDGN R+ L AG+R G ++ E+G+K +TIFAF
Sbjct: 28 LCNGPIPSHLSVIMDGNRRFTKKENLKPGAGYRAGFSALMSMLKYCYELGVKYVTIFAFG 87
Query: 65 INNWRRPVSEISELVKLIKSF---LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
I+N++R E+ ++ L+ + K + + ++V IGN LD+ + ++
Sbjct: 88 IDNFKRRSDEVQVIMDLMLEKTLGMLKEESIVHQYGVRVYFIGNLKLLDEPLRVAAEKVM 147
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYL 174
T NT L I YSS DEI+ A++ Q+ +S ++ L
Sbjct: 148 RTTSNNTKFVLLICVAYSSTDEIAHAVQESCQEKWKE---IEHSNSDKVSNDL 197
Score = 86.9 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 37/86 (43%)
Query: 146 RAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYS 205
++ + + + + K++ + PDPD++IRT GE RLS+FLLWQ
Sbjct: 273 NSVSGNLDEEREKMQSNSIIKQVDLQKHMYMAVAPDPDILIRTAGETRLSNFLLWQAGDC 332
Query: 206 EFVFIPEYWPDFSRELFFHALNQYNL 231
WP+F A+ +
Sbjct: 333 PLYSPDVLWPEFGLRHLVWAVLNFQR 358
>gi|14601375|ref|NP_147911.1| undecaprenyl pyrophosphate synthetase [Aeropyrum pernix K1]
gi|42559900|sp|Q9YC66|UPPS_AERPE RecName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP
synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|5105068|dbj|BAA80382.1| undecaprenyl pyrophosphate synthetase [Aeropyrum pernix K1]
Length = 219
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 60/238 (25%), Positives = 99/238 (41%), Gaps = 32/238 (13%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEV--GIKNLTIFAFSINNW 68
P IGII DGN RWA+ RG + G I+ + I+++ ++ S +N
Sbjct: 4 PRAIGIIPDGNRRWASLRGENLYIAYYTGYRNVKRILTYIRDFYPAIRSVYLYVLSRDNC 63
Query: 69 -RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLS--LDDDILC-----VLKEA 120
+R +E+S L ++++ +++ ++K + ++G+ L D+I
Sbjct: 64 SKRSRAELSILYRIMRRSIERDIAEIEKGGASLVIVGDINHPNLPDNIRESLAPYHFDMY 123
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ L G + Y EI + L +
Sbjct: 124 LKKGSLPDGRRVVAGLCYDPFWEI------------------EHYTPKTLPSRL----LD 161
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+ DL+IRTGGEKRLS F Y+E FI + WPDF+RE A+ ++ R R G
Sbjct: 162 EIDLVIRTGGEKRLSSFFPLLTRYAELYFIDKLWPDFTREDLDRAVQWFSTRRRPMGR 219
>gi|299472389|emb|CBN77577.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 148
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 52/131 (39%), Positives = 78/131 (59%)
Query: 107 LSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVD 166
L + +L +++AED TR TG I +Y +R E++ A + I Q++ SG VD
Sbjct: 17 SQLPERVLSAIQKAEDATRDCTGFLFNICLSYGARQEMANACRQIAQEVASGVTSLDLVD 76
Query: 167 SSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHAL 226
+ ++L T +PDPDL+IRT GEKR+S+FLL+Q+AY+E F+ + WPD +R
Sbjct: 77 ECAVERHLLTKGLPDPDLLIRTSGEKRVSNFLLFQMAYTELFFVDKLWPDITRRDVLDIF 136
Query: 227 NQYNLRDRRFG 237
+ R RRFG
Sbjct: 137 EAFKTRKRRFG 147
>gi|2231183|gb|AAB61966.1| ORF1 [Haemophilus influenzae]
Length = 106
Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats.
Identities = 43/106 (40%), Positives = 63/106 (59%)
Query: 135 AFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRL 194
A NY +I +A K I + ++ + D+++S +L T + P DL+IRT GE+R+
Sbjct: 1 AANYGGCWDIIQAAKQIAEKVKKEEMSVSDINNSTFQHHLATQNAPPVDLLIRTSGEQRI 60
Query: 195 SDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
S+FLLWQ+AY+E F WPDF++ F A+ Y R RRFGG
Sbjct: 61 SNFLLWQIAYAELYFSDVLWPDFNQLEFNRAIASYQQRHRRFGGTE 106
>gi|237801531|ref|ZP_04589992.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331024391|gb|EGI04447.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 122
Score = 141 bits (356), Expect = 7e-32, Method: Composition-based stats.
Identities = 46/115 (40%), Positives = 71/115 (61%)
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+ L IA NY + +I++A + + +++++G + D+ L+ L T D+P PDL IR
Sbjct: 1 SRFVLQIAANYGGQWDIAQAAQRLAREVQAGHLQPEDITPELLQTCLATGDLPLPDLCIR 60
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
TGGE R+S+FLLWQ+AY+E F +WPDF + AL + R RRFG S++
Sbjct: 61 TGGEHRISNFLLWQLAYAELYFSDLFWPDFKHDAMRAALADFASRQRRFGRTSEQ 115
>gi|296005088|ref|XP_001349261.2| dehydrodolichyl diphosphate synthetase, putative [Plasmodium
falciparum 3D7]
gi|225632278|emb|CAD51110.2| dehydrodolichyl diphosphate synthetase, putative [Plasmodium
falciparum 3D7]
Length = 317
Score = 141 bits (356), Expect = 7e-32, Method: Composition-based stats.
Identities = 65/279 (23%), Positives = 104/279 (37%), Gaps = 61/279 (21%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
HI IIMDGN R+A +GL GH G + +I+ ++ IK L++F+FS+ N+ R
Sbjct: 21 KHISIIMDGNRRFAKEKGLHTAIGHFMGSKTLIQIIEICIKLNIKILSVFSFSLLNYNRS 80
Query: 72 VSEISELVKLIKSFL-----------------------------------KKGFYSLKKN 96
EI L L L + N
Sbjct: 81 PEEIHFLFYLNLLVLINEDFFFKFIKDNKIKIKIIGNLSYVNDSYRKIIYDIEEKTKNFN 140
Query: 97 NIKVRV---------IGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISR- 146
NI++ + + + K + + +G N+ +I
Sbjct: 141 NIRLNIFFSYTSRNEMSLCSFNPNLYRDTYKNLLQEKNIYSGTNILTDPIKEGYFDIPTQ 200
Query: 147 ---------------AIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
E ++ L TSD+P P+++IRT GE
Sbjct: 201 EEELKYPDHENENELKFDGKCLCREKVKYNEEQLEIVNYHNKLLTSDLPPPNILIRTSGE 260
Query: 192 KRLSDFLLWQVA-YSEFVFIPEYWPDFSRELFFHALNQY 229
+RLSDF+L+Q++ ++E FI EYWP F+ F + + Y
Sbjct: 261 QRLSDFMLYQISEFTEIYFINEYWPVFNFLQFIYIILHY 299
>gi|62318659|dbj|BAD95141.1| dehydrodolichyl diphosphate synthase - like protein [Arabidopsis
thaliana]
Length = 146
Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 55/134 (41%), Positives = 82/134 (61%), Gaps = 2/134 (1%)
Query: 98 IKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIES 157
IK+ VIGNR L + +L +++E E+ T+ G NL IA +YS R +I +A K++ ++
Sbjct: 2 IKISVIGNRTKLPESLLGLIEEVEEATKSYEGKNLIIAIDYSGRYDILQACKSLANKVKD 61
Query: 158 GSVCSHDVDSSLIAKYLDT--SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWP 215
G + D++ + K L T S+ P+PDL+IRT GE+R+S+F LWQ AY+E F WP
Sbjct: 62 GLIQVEDINEKAMEKELLTKCSEFPNPDLLIRTSGEQRISNFFLWQSAYTELYFPTVLWP 121
Query: 216 DFSRELFFHALNQY 229
DF + AL Y
Sbjct: 122 DFGEAEYLEALTWY 135
>gi|315931169|gb|EFV10142.1| di-trans,poly-cis-decaprenylcistransferase [Campylobacter jejuni
subsp. jejuni 327]
Length = 150
Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 48/144 (33%), Positives = 83/144 (57%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ ++MDGN RWA A+G G+ +G++ +++ E I NL++FAFS NW+RP
Sbjct: 5 KHLAVVMDGNRRWARAKGFLAKLGYSQGVKTMQKLMEVCMEENISNLSLFAFSTENWKRP 64
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
EI + +L+ L + +KNN+++R IG+ L+D + + E++T+ L
Sbjct: 65 KDEIDFIFELLDRCLDEALEKFEKNNVRLRAIGDLSRLEDKVREKITLVEEKTKHCDALC 124
Query: 132 LFIAFNYSSRDEISRAIKNIFQDI 155
+ +A +Y +RDEI RA K + +
Sbjct: 125 VNLAISYGARDEIIRAAKRVIEKN 148
>gi|256079781|ref|XP_002576163.1| dehydrodolichyl diphosphate synthase (dedol-pp synthase)
[Schistosoma mansoni]
gi|238661425|emb|CAZ32398.1| dehydrodolichyl diphosphate synthase (dedol-pp synthase), putative
[Schistosoma mansoni]
Length = 249
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 54/168 (32%), Positives = 90/168 (53%), Gaps = 5/168 (2%)
Query: 68 WRRPVSEISELVKLIKSFLKKGFY---SLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
++ E+S L+ L + L++ LK ++I +RVIGN L + + + T
Sbjct: 22 LKKSHEEVSFLMNLAEEKLQELLDNKDELKADDICIRVIGNLALLPAKVQSLAAQLMLVT 81
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
R ++ L I Y+SR++I+ A++ + ++ G + D+ L++K L T DL
Sbjct: 82 RNHSKSILNICMAYNSRNDITNAMEIVRLGVKEGKIIPSDITRELLSKCLYTRLSKPLDL 141
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFV--FIPEYWPDFSRELFFHALNQYN 230
+IRT GE RLSDFL WQV+ ++ + FI YWP+FS F ++ Y
Sbjct: 142 LIRTSGEIRLSDFLTWQVSENDTIYKFINNYWPEFSWWDFLSSIIHYQ 189
>gi|254392806|ref|ZP_05007977.1| undecaprenyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
gi|197706464|gb|EDY52276.1| undecaprenyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
Length = 202
Score = 138 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 57/190 (30%), Positives = 92/190 (48%), Gaps = 4/190 (2%)
Query: 37 RKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKN 96
G ++V+ GI +T++A S +N RR + + ++ L G + +
Sbjct: 5 HTGRHEMADLVSWCETEGIAVVTVWALSRDNLRRDAAAVGRILDATAVGLA-GIAASGRW 63
Query: 97 NIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIE 156
+I++ IG L L+ D+T + L +A Y R +I+ A++ + +
Sbjct: 64 HIRL--IGETDLLPAAPARRLRSVADRTATGSPGTLNVAVAYDGRADIAGAVRGLLRSG- 120
Query: 157 SGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPD 216
+ V S + +YL T+ +PD DL+IRT GE+RLS FL WQ AY+E F WP
Sbjct: 121 VTGGTAAAVRESDVERYLSTAGLPDVDLVIRTSGERRLSGFLPWQTAYAELHFTAALWPA 180
Query: 217 FSRELFFHAL 226
FS + F AL
Sbjct: 181 FSFDDFTVAL 190
>gi|302759659|ref|XP_002963252.1| hypothetical protein SELMODRAFT_404991 [Selaginella moellendorffii]
gi|300168520|gb|EFJ35123.1| hypothetical protein SELMODRAFT_404991 [Selaginella moellendorffii]
Length = 210
Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats.
Identities = 52/172 (30%), Positives = 96/172 (55%), Gaps = 5/172 (2%)
Query: 48 AAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYS-LKKNNIKVRVIGNR 106
+++ GIK LT+FAFS N+ RP E+ + ++ + L + + + I+ R IG+
Sbjct: 33 RLSSDWGIKALTLFAFSTENFLRPREEVDQWMQQLDRVLSLDDPATILLDGIQFRCIGDT 92
Query: 107 LSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVD 166
L + + +A+ T NTG+ L +A YS +++ +A + + +++E + ++D
Sbjct: 93 ARLPRPLQAKISDAQSITSGNTGMKLVMAIGYSGHNDLVQACQALAREVEQAKLAVEEID 152
Query: 167 SSLIAKYLDTSDVPD----PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYW 214
+AK L + + P+L++RT G++RLS+F+LW +AYSE VF W
Sbjct: 153 QINLAKRLMLGERCEDVGAPELLVRTSGKQRLSNFMLWHLAYSELVFEKMPW 204
>gi|20387101|dbj|BAB91251.1| cis-prenyltransferase [Hevea brasiliensis]
Length = 207
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 34/209 (16%)
Query: 15 GIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSE 74
IMDGN R+A + G++ G + E+G++ +TI+AFSI+N+RR E
Sbjct: 1 AFIMDGNRRFAKKHKMKEAEGYKAGYLALLRTLTYCYELGVRYVTIYAFSIDNFRRQPRE 60
Query: 75 ISELVKLIKSFLKKGFYSLKKNN---IKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
+ ++ L+ +++ N + VR++GN LD+ I ++ T N+
Sbjct: 61 VQCVMNLMMEKIEEIIVEESIMNAYDVGVRIVGNLNLLDEPIRIAAEKIMRATANNSRFV 120
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD--------------------------- 164
L IA YSS DEI A++ +D + + ++
Sbjct: 121 LLIAVAYSSTDEIVHAVEESSKDKLNSNEVCNNGIEAEQEFKEANGTGNSVIPVQKTESY 180
Query: 165 --VDSSLIAKYLDTSDVPDPDLIIRTGGE 191
++ + + K T P PD++I T GE
Sbjct: 181 SGINLADLEKN--TYVNPHPDVLISTSGE 207
>gi|56206239|emb|CAI21491.1| dehydrodolichyl diphosphate synthase [Homo sapiens]
Length = 161
Score = 136 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 47/124 (37%), Positives = 71/124 (57%)
Query: 107 LSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVD 166
L D+ ++ +A T+ L + F Y+SR EIS A++ + +E G + D+
Sbjct: 1 HLLPLDLQELIAQAVQATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDIS 60
Query: 167 SSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHAL 226
SL+ K L T+ P PD++IRT GE RLSDFLLWQ ++S VF P WP+++ F A+
Sbjct: 61 ESLLDKCLYTNRSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAI 120
Query: 227 NQYN 230
Q+
Sbjct: 121 LQFQ 124
>gi|156097733|ref|XP_001614899.1| dehydrodolichyl diphosphate synthetase [Plasmodium vivax SaI-1]
gi|148803773|gb|EDL45172.1| dehydrodolichyl diphosphate synthetase, putative [Plasmodium vivax]
Length = 289
Score = 135 bits (341), Expect = 4e-30, Method: Composition-based stats.
Identities = 67/271 (24%), Positives = 112/271 (41%), Gaps = 60/271 (22%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGN R+A +G+ GH G + +I+ + +K L++F+ S+ N+ R EI
Sbjct: 1 MDGNRRFAKEKGVHSSVGHYLGSKTLIQILEICVRLNVKVLSVFSLSLLNYNRSPEEIHF 60
Query: 78 LVKLIKSFLKKG---FYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFI 134
L L L + N I+V+V+GN + + ++++ E +T L L I
Sbjct: 61 LFFLNLIILINEEFFMNFIMDNKIRVKVLGNLSYISEAYRKIIQDIEQKTEQFDNLLLNI 120
Query: 135 AFNYSSRDEISRAIKNIFQDIESGSVCSHDVD-----------------SSLIAKYLDTS 177
F+Y+SR+E+S + + + + + L S
Sbjct: 121 FFSYTSRNEMSLCKFDPNLYFNTYKSLLEEKNILCAPSSTLTEQNEPDKCDYLESILK-S 179
Query: 178 DVPDPD--------------------------------------LIIRTGGEKRLSDFLL 199
+ DP+ ++IRT GEKRLSDF+L
Sbjct: 180 ERNDPNKLFEVECICGGRSFLNRGQIKIVNYHKKLLTCDLPPPNILIRTSGEKRLSDFML 239
Query: 200 WQVA-YSEFVFIPEYWPDFSRELFFHALNQY 229
+Q++ ++E FI EYWP FS F + + Y
Sbjct: 240 YQISEFTEIYFINEYWPIFSFLQFIYVILHY 270
>gi|226322653|ref|ZP_03798171.1| hypothetical protein COPCOM_00425 [Coprococcus comes ATCC 27758]
gi|225208990|gb|EEG91344.1| hypothetical protein COPCOM_00425 [Coprococcus comes ATCC 27758]
Length = 96
Score = 135 bits (341), Expect = 4e-30, Method: Composition-based stats.
Identities = 45/88 (51%), Positives = 58/88 (65%)
Query: 154 DIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEY 213
D G ++ L YLDT +PDPDL+IRT GE RLS++LLWQ+AY+EF F
Sbjct: 4 DCADGRFAPEEITEELFEGYLDTHGIPDPDLLIRTSGELRLSNYLLWQLAYTEFYFTDVP 63
Query: 214 WPDFSRELFFHALNQYNLRDRRFGGLSK 241
WPDFS+E A+ QYN RDRR+GG+ +
Sbjct: 64 WPDFSKEELEKAIEQYNSRDRRYGGIKE 91
>gi|239943142|ref|ZP_04695079.1| short-chain Z-isoprenyl diphosphate synthase [Streptomyces
roseosporus NRRL 15998]
gi|239989600|ref|ZP_04710264.1| short-chain Z-isoprenyl diphosphate synthase [Streptomyces
roseosporus NRRL 11379]
Length = 230
Score = 135 bits (341), Expect = 4e-30, Method: Composition-based stats.
Identities = 54/232 (23%), Positives = 94/232 (40%), Gaps = 11/232 (4%)
Query: 15 GIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT--IFAFSINNWRRPV 72
+++DG ++A +G+ +R G EI G +T I + + +
Sbjct: 2 AVLLDGLAQFAEEQGVSEAMAYRAGCAKQLEIARWCHARGAGTVTLEILPPTHTDPHEDI 61
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG--L 130
+ +E ++ FL +I + +G+ L + + + + T
Sbjct: 62 AADAEWAAVLDDFL---VGWDGARDIALNHLGDPARLPVKLADRFRASAARRDAATQGSF 118
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKYLDTSDVPDPDLII 186
+ +A Y EI A++ ++ DV D + L + +P DLII
Sbjct: 119 QVNLALGYDGHGEILDAVRATLHQAQADGRGLTDVAAALDVESLETQLASGPLPPVDLII 178
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R GG + LS FLLWQ AY+EF F P +++ A Y R+RR+G
Sbjct: 179 RAGGGQYLSGFLLWQSAYAEFYFSGTPAPALTQDDLTAAFADYARRNRRYGK 230
>gi|325067237|ref|ZP_08125910.1| undecaprenyl pyrophosphate synthase [Actinomyces oris K20]
Length = 131
Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats.
Identities = 44/125 (35%), Positives = 64/125 (51%), Gaps = 4/125 (3%)
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV----DSSLIAKY 173
+ E + + + IA Y R EI+ A++ + ++ + +V I ++
Sbjct: 7 EAVETAEAEDRRMQVNIAVGYGGRQEIADAVRELLRERAAAGASLEEVAASLSEEDITEH 66
Query: 174 LDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
L T PDPDL+IRT GE+RLS FLLWQ +SE+ F WP F R F AL + R+
Sbjct: 67 LYTKGQPDPDLVIRTSGEQRLSGFLLWQSVHSEYYFCEVNWPAFRRVDFLRALRDFASRE 126
Query: 234 RRFGG 238
RR G
Sbjct: 127 RRLGR 131
>gi|303390895|ref|XP_003073678.1| undecaprenyl pyrophosphatase synthetase [Encephalitozoon
intestinalis ATCC 50506]
gi|303302825|gb|ADM12318.1| undecaprenyl pyrophosphatase synthetase [Encephalitozoon
intestinalis ATCC 50506]
Length = 246
Score = 135 bits (339), Expect = 7e-30, Method: Composition-based stats.
Identities = 60/218 (27%), Positives = 95/218 (43%), Gaps = 31/218 (14%)
Query: 14 IGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVS 73
+ I DGN R+ G G++ E + G+K ++ F F+++N RR
Sbjct: 51 VAFICDGNRRYMKKIGQKDKFTRDPGLQKIYEFINFGYFYGLKEVSFFCFALSNLRRTPE 110
Query: 74 EISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLF 133
E++ ++ +I+ +K + K K V G LD D+ L E E +T NT + +
Sbjct: 111 EVNGIMNIIRKKIKNPKKTSIKP--KFLVYGRLDLLDSDVRNKLIEVEKETENNTDIVVN 168
Query: 134 IAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKR 193
I F YSS DEI+R IK + D++IRTG KR
Sbjct: 169 IFFAYSSEDEINRGIKFDSK----------------------------VDILIRTGDAKR 200
Query: 194 LSDFLLWQVA-YSEFVFIPEYWPDFSRELFFHALNQYN 230
LS+F++ QVA + F WP+ + F L ++
Sbjct: 201 LSNFMVRQVATGTSVFFAKVLWPELTIVHLFLILLKHQ 238
>gi|67538860|ref|XP_663204.1| hypothetical protein AN5600.2 [Aspergillus nidulans FGSC A4]
gi|40743053|gb|EAA62243.1| hypothetical protein AN5600.2 [Aspergillus nidulans FGSC A4]
Length = 356
Score = 135 bits (339), Expect = 7e-30, Method: Composition-based stats.
Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 3/149 (2%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGN R+A + G+ GH G E I+ G++ +TI+AFSI N++R E+
Sbjct: 1 MDGNRRFARSHGIETVEGHNLGFEALARILEVCYRSGVQVVTIYAFSIENFKRSKFEVDA 60
Query: 78 LVKLIKSFLKKGFYS---LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFI 134
L+++ + L + L + KVR++G L D+L + A D T+ N L I
Sbjct: 61 LMEMARVKLSQMAQHGEILDRYGAKVRILGRLDLLRPDVLAAVNRAVDMTKNNGDRVLNI 120
Query: 135 AFNYSSRDEISRAIKNIFQDIESGSVCSH 163
F Y+SRDEI+ AI+ + +H
Sbjct: 121 CFPYTSRDEITGAIRETVAEYSKPIRTAH 149
Score = 89.2 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 161 CSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVA-YSEFVFIPEYWPDFSR 219
+ +A ++ T D P DL+IRT G +RLSDF+LWQ +E F+ WP+F
Sbjct: 244 SPETITRQTLADHMLTRDNPPLDLLIRTSGVERLSDFMLWQCHENTEIAFLDILWPEFDL 303
Query: 220 ELFFHALNQYNL 231
F L ++
Sbjct: 304 WHFLPVLLRWQR 315
>gi|147920634|ref|YP_685567.1| undecaprenyl pyrophosphate synthetase [uncultured methanogenic
archaeon RC-I]
gi|110620963|emb|CAJ36241.1| undecaprenyl pyrophosphate synthetase [uncultured methanogenic
archaeon RC-I]
Length = 216
Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats.
Identities = 55/238 (23%), Positives = 94/238 (39%), Gaps = 39/238 (16%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
M+ S+ P I +++ R + E+G+ L+I
Sbjct: 18 MLRSIKGERVPKCIAVVV-----------SDADLVDRPSTLKLASLAEWCTEMGVGELSI 66
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ + S + L I L+ ++ K
Sbjct: 67 YVSTTEG-----STVPGLADCIYQTLQGA------------------GFPGKVVSPGK-- 101
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
Q + L + ++ Y + E++ A++ I +D+ +G + D+D +++ +L
Sbjct: 102 VRQLTGHKPLTVSLSIGYGGKHELTNALREIMEDVRAGKIQPKDIDEAMVEAHLIFR--C 159
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+PDL IRT GE+RLSDFL+WQ YSE F W +F + A+ Y LR RRFG
Sbjct: 160 EPDLFIRT-GEERLSDFLIWQSVYSELYFTDVNWEEFRKVDLLRAIRDYQLRQRRFGK 216
>gi|299473464|emb|CBN77861.1| undecaprenyl diphosphate synthase [Ectocarpus siliculosus]
Length = 373
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 44/112 (39%), Positives = 66/112 (58%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ +MDGNGRWAA R LPR GH +G E V A +G++ +T++AFS NWR
Sbjct: 71 VPRHVAFVMDGNGRWAANRNLPRRIGHAEGARRAGEAVEACRRLGVEFVTLYAFSTENWR 130
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
RP E+S ++ L++ L + SL++N I++ IG L + +L E +
Sbjct: 131 RPTGEVSFIMDLMEETLLEQRDSLRRNGIRLTAIGELDRLPARLRSLLLEIQ 182
Score = 105 bits (261), Expect = 8e-21, Method: Composition-based stats.
Identities = 43/115 (37%), Positives = 65/115 (56%), Gaps = 2/115 (1%)
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS--DVPDPDLIIR 187
+ L +A +Y R E+ A + + + +G + D+D +A+ L T+ +PDPDL++R
Sbjct: 255 MTLCLAISYGGRSELVAAARELAAEAAAGRLDPADIDEPALARRLSTARLGIPDPDLVVR 314
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
T GE RLS+ L+WQ AYSE + + WPDF R A Y R RRFG ++
Sbjct: 315 TSGESRLSNLLVWQSAYSELCVVGKAWPDFRRPDLVEAFRDYGRRRRRFGKTPEQ 369
>gi|282165609|ref|YP_003357994.1| di-trans-poly-cis-decaprenylcistransferase family protein
[Methanocella paludicola SANAE]
gi|282157923|dbj|BAI63011.1| di-trans-poly-cis-decaprenylcistransferase family protein
[Methanocella paludicola SANAE]
Length = 213
Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 56/238 (23%), Positives = 95/238 (39%), Gaps = 41/238 (17%)
Query: 1 MVASMMSSSPPDHIG-IIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ + + S P I +I DG R + +++ AE+G+ +
Sbjct: 15 LASGIKQSPVPRCIALVISDG------------DLIDRPALNKLLQLIEWCAELGVHEAS 62
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
I+ + S +S LV+ I+ K+ G ++ D+ C
Sbjct: 63 IYVSVTD-----TSAVSRLVECIRDVFD-----GAGFPGKIVSPGGIADIEGDMPC---- 108
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV 179
+ ++ Y + E+ A++ +D++ G + +D I L
Sbjct: 109 -----------TVSVSIGYGGKHELINALRAAMKDVKEGRLSEDSIDEQAIDSRLVFK-- 155
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+PDL IRT GE+RL+DFL+WQ YSE F W DF + A+ Y R RR+G
Sbjct: 156 CEPDLFIRT-GEERLTDFLIWQAVYSELYFTDVNWEDFRKIDLLRAIRDYQYRQRRYG 212
>gi|46203623|ref|ZP_00051246.2| COG0020: Undecaprenyl pyrophosphate synthase [Magnetospirillum
magnetotacticum MS-1]
Length = 117
Score = 128 bits (321), Expect = 8e-28, Method: Composition-based stats.
Identities = 46/96 (47%), Positives = 65/96 (67%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
+ P H+ IIMDGNGRWAA+ GLPR GHR+G+E V +A +GI LT+++FS
Sbjct: 22 ARPAPRHVAIIMDGNGRWAASLGLPRFEGHRRGVEAVRRAVRSAISLGIGYLTVYSFSSE 81
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRV 102
NW RP SE+S+L+ L+K F++ L +N++VRV
Sbjct: 82 NWSRPASEVSDLMGLLKLFVRGDLADLHASNVRVRV 117
>gi|120402706|ref|YP_952535.1| di-trans-poly-cis-decaprenylcistransferase [Mycobacterium
vanbaalenii PYR-1]
gi|119955524|gb|ABM12529.1| Di-trans-poly-cis-decaprenylcistransferase [Mycobacterium
vanbaalenii PYR-1]
Length = 215
Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 54/229 (23%), Positives = 88/229 (38%), Gaps = 21/229 (9%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+G+I DG RWA A +R+G E E++ A ++ +T++ S N R
Sbjct: 3 PAHVGLIPDGLRRWARANDTTLTDAYRRGAETVVELLLALQRNQVQTVTVYNLSRANLAR 62
Query: 71 PVSEISELVKLIKSFLKKGFY-SLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
P E+ + FL + VRV G+R L D ++ E G
Sbjct: 63 PSDELDAVYAASTYFLSTLIPARFDPADCGVRVHGDRSLLPDAFAAAARDIETAMTGG-G 121
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ + Y + DE+ RA + + ++ DL+IRT
Sbjct: 122 FRINMLAAYDAADEL-RAAHQRALRDDCDINDAFEIGE--------------VDLVIRTT 166
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQY----NLRDR 234
E LS FL Q Y++ +F+ + + + + Y LR R
Sbjct: 167 AEPLLSGFLPMQSQYAQLLFLTTPLNELTPQHIDGFIEDYRHSPQLRGR 215
>gi|315445629|ref|YP_004078508.1| undecaprenyl pyrophosphate synthase [Mycobacterium sp. Spyr1]
gi|315263932|gb|ADU00674.1| undecaprenyl pyrophosphate synthase [Mycobacterium sp. Spyr1]
Length = 226
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 53/229 (23%), Positives = 91/229 (39%), Gaps = 21/229 (9%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+G++ DG RWA G +R+G E EI+ A ++ ++++ S N R
Sbjct: 14 PAHVGLVPDGLRRWAETNGATLTDAYRRGSEKVIEILLALQRNDVQTVSVYNLSRANLGR 73
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKN-NIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
E+ + F + VR+ G+R L ++ + + E + G
Sbjct: 74 TDDELEAVYTASIYFFNALIPAHFDPATTSVRLHGDRSLLPNEYVAAAQHVESASAD-DG 132
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
+ I Y + DE+ A +D D+ + ++ D DL+IRT
Sbjct: 133 FRINILAAYDAADELGEAYLRAQRDGC-------DIAEAF--------EIGDVDLVIRTT 177
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQY----NLRDR 234
E LS FL +Q Y++ +F+ D + + Y LR R
Sbjct: 178 PEPLLSGFLPYQSQYAQLIFLETPLNDLTVRHIDDLIEDYRRSPQLRGR 226
>gi|91806246|gb|ABE65851.1| dehydrodolichyl diphosphate synthase/DEDOL-PP synthase [Arabidopsis
thaliana]
Length = 126
Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats.
Identities = 40/116 (34%), Positives = 60/116 (51%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ I+DGN RWA GL GH G + EI E+GI ++ FAFS NW
Sbjct: 1 MPRHVSFILDGNRRWAKRDGLTTAQGHEAGTKRIIEIAEVCFELGIHTVSAFAFSTENWG 60
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
R E+ L+ L +LK ++ ++V VIGN+ + + +L + E E+ T+
Sbjct: 61 RDKFEVKCLMSLFNHYLKSNIQYFQRKEVRVSVIGNKTKIPESLLKEIHEIEEATK 116
>gi|289746139|ref|ZP_06505517.1| long-chain (C50) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis 02_1987]
gi|289686667|gb|EFD54155.1| long-chain (C50) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis 02_1987]
Length = 168
Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats.
Identities = 40/103 (38%), Positives = 64/103 (62%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P+H+ I+MDGNGRWA RGL R GH+ G V +I A E+GIK L+++AF
Sbjct: 61 RIPADRLPNHVAIVMDGNGRWATQRGLARTEGHKMGEAVVIDIACGAIELGIKWLSLYAF 120
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNR 106
S NW+R E+ L+ + +++ +LKK +++R +G+R
Sbjct: 121 STENWKRSPEEVRFLMGFNRDVVRRRRDTLKKLGVRIRWVGSR 163
>gi|302832029|ref|XP_002947579.1| hypothetical protein VOLCADRAFT_44343 [Volvox carteri f.
nagariensis]
gi|300266927|gb|EFJ51112.1| hypothetical protein VOLCADRAFT_44343 [Volvox carteri f.
nagariensis]
Length = 179
Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats.
Identities = 43/180 (23%), Positives = 82/180 (45%), Gaps = 4/180 (2%)
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+AFS NW R E++ L++L++ + L I++ G+R +L + + E+
Sbjct: 1 YAFSTENWERGREEVAFLMRLMERTIILEVPELHAQGIRLVFAGDRTALPNRC-DEVAES 59
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIK--NIFQDIESGSVCSHDVD-SSLIAKYLDTS 177
+ L + E + + + + + V S ++ ++ S
Sbjct: 60 LWMGHSSVFLRFPCFLGHDVWKEAPQGLHEVDKRVEWLTNRPLPEGVHLSDRLSTHMTHS 119
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
V DPD +IR E++LS+FLL AY+E F WP+F+ + + A+ + + RR+G
Sbjct: 120 LVGDPDPLIRVSWEQQLSNFLLSNCAYTELYFTSTCWPNFAEKGWEDAVRHFASKQRRYG 179
>gi|76664634|emb|CAI77470.1| undecaprenyl pyrophosphate synthetase [Lactobacillus reuteri]
Length = 105
Score = 125 bits (313), Expect = 8e-27, Method: Composition-based stats.
Identities = 41/88 (46%), Positives = 58/88 (65%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ P+HI IIMDGNGRWA R LPR AGH++G++ +I AA+E+G+K L+++AF
Sbjct: 18 QLDMERIPNHIAIIMDGNGRWAQKRHLPRVAGHKQGMQTVKKITIAASELGVKVLSLYAF 77
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFY 91
S NW+RP SE+S L++L F
Sbjct: 78 STENWKRPSSEVSYLMQLPVRFFSTFVP 105
>gi|73668607|ref|YP_304622.1| undecaprenyl pyrophosphate synthetase [Methanosarcina barkeri str.
Fusaro]
gi|72395769|gb|AAZ70042.1| undecaprenyl pyrophosphate synthetase [Methanosarcina barkeri str.
Fusaro]
Length = 224
Score = 124 bits (312), Expect = 9e-27, Method: Composition-based stats.
Identities = 53/234 (22%), Positives = 97/234 (41%), Gaps = 36/234 (15%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S+ P H+ II+ L GIE + + G++ ++++
Sbjct: 24 SNIPRHVAIIL-------KETDLFDPE----GIERLISTLNIFRKFGVQIVSVY------ 66
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDI---LCVLKEAEDQT 124
+ L LK S K ++ +L + + + T
Sbjct: 67 -------VDILK--TDPTLKAEVASTLKTRLETNF----SNLPAGTGYQIYDVDGEVNST 113
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
++++ + RDEI RA+ I +++++ +V +VD +I +L + +PD+
Sbjct: 114 APGNDFLVYVSLGFGGRDEIMRAVLTILEEVKARTVRPEEVDEKMIESHLLVNH--EPDI 171
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+IR+GG + LSDFL+WQ YSE F W D + A+ + R RR+G
Sbjct: 172 MIRSGG-QNLSDFLVWQSVYSELYFTDVNWKDVRKVDLLRAMRDFQKRKRRYGR 224
>gi|260204329|ref|ZP_05771820.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis K85]
gi|289573741|ref|ZP_06453968.1| short chain Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis K85]
gi|289538172|gb|EFD42750.1| short chain Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis K85]
Length = 202
Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 38/160 (23%), Positives = 74/160 (46%), Gaps = 3/160 (1%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
S P HI ++ DGN RWA + G G+R G E++ E GI+ T++ S
Sbjct: 28 KSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWCHEAGIELATVYLLST 87
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
N +R E++ L+++I +++ N+ VR +G+ + ++ L+ A + T
Sbjct: 88 ENLQRDPDELAALIEIITDVVEE--ICAPANHWSVRTVGDLGLIGEEPARRLRGAVESTP 145
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDV 165
++ +A Y R EI A++ + + + ++
Sbjct: 146 EVASFHVNVAVGYGGRREIVDAVRALLSKELANGATAEEL 185
>gi|294494879|ref|YP_003541372.1| undecaprenyl diphosphate synthase [Methanohalophilus mahii DSM
5219]
gi|292665878|gb|ADE35727.1| undecaprenyl diphosphate synthase [Methanohalophilus mahii DSM
5219]
Length = 228
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 46/205 (22%), Positives = 81/205 (39%), Gaps = 25/205 (12%)
Query: 37 RKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKN 96
+ + + + E GIK + ++ E L + L + +
Sbjct: 46 KNSSQKTFQFINWCQEFGIKKIYFNVDILD-------EKPHLKNRMVDKLAQVIERI--- 95
Query: 97 NIKVRVIGNRLSLDDDI---LCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQ 153
L + ++ T+ ++ Y + EI+ +++ I
Sbjct: 96 ---------CSKLPPKTGYNVYGVEGDVLLTKSGKDPSIIFVLGYGGKKEITSSVRTILC 146
Query: 154 DIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEY 213
D+E G++ D+D + + +L +PDLIIR+GG + LSDFL+WQ YSE F
Sbjct: 147 DVEKGNIEPEDIDENTLESHLTIEG--EPDLIIRSGG-RHLSDFLIWQSVYSELYFTDIN 203
Query: 214 WPDFSRELFFHALNQYNLRDRRFGG 238
W F R F + + R RR+G
Sbjct: 204 WNRFRRIDFLRIIRDFQKRKRRYGK 228
>gi|268323338|emb|CBH36926.1| putative undecaprenyl pyrophosphate synthetase [uncultured
archaeon]
Length = 234
Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 46/199 (23%), Positives = 87/199 (43%), Gaps = 13/199 (6%)
Query: 39 GIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNI 98
G+E + + I ++++ I R + + L + +++ +L K
Sbjct: 48 GMEKLRHFIKWCHGLEINVISVYVGVI----REGMDKNLLEQAYAQLMEEITKALSKEKA 103
Query: 99 KVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESG 158
+ + DD + + + N + I+ + R E+++ IK I ++ G
Sbjct: 104 SIALY------DDSFEPTYAKKIGEEKGNNEKKINISIGFGGRSELTKGIKEIVARVKIG 157
Query: 159 SVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS 218
+ ++D L+ L +PDL+IR G RL+DFL+WQ YSEF F W F
Sbjct: 158 ELEPEEIDEKLLESQLIFK--SEPDLVIR-SGATRLADFLIWQSVYSEFYFTDVNWLKFR 214
Query: 219 RELFFHALNQYNLRDRRFG 237
+ + A+ + R+RR+G
Sbjct: 215 KIDLYRAVRDFRWRERRYG 233
>gi|145630003|ref|ZP_01785785.1| hypothetical protein CGSHi22421_08128 [Haemophilus influenzae
R3021]
gi|144984284|gb|EDJ91707.1| hypothetical protein CGSHi22421_08128 [Haemophilus influenzae
R3021]
Length = 81
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 36/81 (44%), Positives = 51/81 (62%)
Query: 160 VCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSR 219
+ D+++S +L T + P DL+IRT GE+R+S+FLLWQ+AY+E F WPDF++
Sbjct: 1 MSVSDINNSTFQHHLATQNAPPVDLLIRTSGEQRISNFLLWQIAYAELYFSDVLWPDFNQ 60
Query: 220 ELFFHALNQYNLRDRRFGGLS 240
F A+ Y R RRFGG
Sbjct: 61 LEFNRAIASYQQRHRRFGGTE 81
>gi|257051279|ref|YP_003129112.1| undecaprenyl diphosphate synthase [Halorhabdus utahensis DSM 12940]
gi|256690042|gb|ACV10379.1| undecaprenyl diphosphate synthase [Halorhabdus utahensis DSM 12940]
Length = 214
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 51/200 (25%), Positives = 85/200 (42%), Gaps = 34/200 (17%)
Query: 39 GIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNI 98
+ ++ A E G +NL ++ +S L + L++
Sbjct: 49 AYDTLESVLEWAFEYGARNLILY-------------VSVLDEAAVPTLRRQLE------- 88
Query: 99 KVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESG 158
G S D + + + +T + I+ + E + A+ + +++E+G
Sbjct: 89 -----GIDTSRDVAVRGPADDHQAETP------IQISIGLGGKHEFATAVSALAREVEAG 137
Query: 159 SVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS 218
+ D+D S I + L DPDL+I+TG E RLSDF++WQ YSE F W DF
Sbjct: 138 ELDPADIDESEIERRLVFR--SDPDLVIKTGAE-RLSDFMIWQSVYSELYFTDVNWRDFR 194
Query: 219 RELFFHALNQYNLRDRRFGG 238
+ + A+ Y R RRFG
Sbjct: 195 KRDYLRAIRDYQQRQRRFGR 214
>gi|237831087|ref|XP_002364841.1| dehydrodolichyl diphosphate synthase, putative [Toxoplasma gondii
ME49]
gi|211962505|gb|EEA97700.1| dehydrodolichyl diphosphate synthase, putative [Toxoplasma gondii
ME49]
gi|221507725|gb|EEE33329.1| dehydrodolichyl diphosphate synthase, putative [Toxoplasma gondii
VEG]
Length = 270
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 42/179 (23%), Positives = 76/179 (42%), Gaps = 15/179 (8%)
Query: 7 SSSPPDHIGIIMDGNGRWAAA-RGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
P H+ IMDGN R+A + GHR G + + + E+GI+ +T++AF++
Sbjct: 22 PQHMPRHVAFIMDGNRRFARRNKEASAVEGHRAGAHTLSVMCESCLELGIQFVTVYAFAL 81
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFY---SLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
N+ R E++ L+ L + + K+ I++R +G+ L + L A
Sbjct: 82 GNFHRQPEEVTGLLNLAEEKFADKAWIDGFFKRLGIRLRFLGDFSYLPPRLRSALATASR 141
Query: 123 QTRL--------NTGLNLFIAFNYSSRDEISRAI---KNIFQDIESGSVCSHDVDSSLI 170
+T L + + Y SR EI+RA+ ++ D +S+
Sbjct: 142 ETADACGDPRGFGCRLLVTVCVAYGSRREIARALAGEVSMLPDAPVDHDLPEARCTSMF 200
>gi|3236388|gb|AAD09946.1| unknown [Coxiella burnetii]
Length = 157
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 62/134 (46%), Positives = 83/134 (61%), Gaps = 5/134 (3%)
Query: 11 PDHIGIIMDGNGRWA---AARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
P H+ I+M G +W+ RGLPR AGHR G +V IV AAE ++ LT+FAFSI N
Sbjct: 26 PRHVAIVM-G-RQWSGGLTRRGLPRVAGHRAGAKVVRRIVEYAAEKPLEVLTLFAFSIEN 83
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
RP SE++ L+ L LKK L KNN+++RVIG+ D +L ++ ++D T+ N
Sbjct: 84 RARPQSEVNFLMSLFLDSLKKNTEELHKNNVQLRVIGDHREFDKKMLAQIQTSQDLTKHN 143
Query: 128 TGLNLFIAFNYSSR 141
TGL L IA NYS R
Sbjct: 144 TGLKLIIALNYSGR 157
>gi|323307742|gb|EGA61005.1| Srt1p [Saccharomyces cerevisiae FostersO]
Length = 220
Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 80/161 (49%), Gaps = 6/161 (3%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ ++ P+H+ IMDGN R+A +R LP GH G ++ +G+K ++
Sbjct: 57 LIKALRVGPVPEHVSFIMDGNRRYAKSRRLPVKKGHEAGGLTLLTLLYICKRLGVKCVSA 116
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKK-----NNIKVRVIGNRLSLDDDILC 115
+AFSI N+ RP E+ L+ L L + K K+R++G++ L ++
Sbjct: 117 YAFSIENFNRPKEEVDTLMNLFTVKLDEFAKRAKDYKDPLYGSKIRIVGDQSLLSPEMKK 176
Query: 116 VLKEAEDQTRLNTGLNLFI-AFNYSSRDEISRAIKNIFQDI 155
+ ++ ++L++ F Y+SR+++ I++ +D
Sbjct: 177 KKLKRWKKSHRMETISLYLYCFPYTSRNDMLHTIRDSVEDH 217
>gi|52549200|gb|AAU83049.1| undecaprenyl diphosphate synthase [uncultured archaeon GZfos26D6]
Length = 234
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 46/200 (23%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 39 GIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNI 98
G+E + + + I ++++ I R + + L + + +++ +L K
Sbjct: 48 GMEKLRDFIKWCHGLEINVISVYVGVI----REGMDKNLLERAYRQLMEEITKALSKEKA 103
Query: 99 KVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESG 158
+ + DD + + + + + I+ + R E+++ IK I +E G
Sbjct: 104 SIALY------DDSFEPTYAKKIGEEKSSNEKEINISIGFGGRSELTKGIKEIVARVERG 157
Query: 159 SVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS 218
+ ++D L+ L +PDL+IR G RL+DFL+WQ YSEF F W F
Sbjct: 158 ELEPEEIDEKLLESQLIFK--SEPDLVIR-SGATRLADFLIWQSVYSEFYFTDVNWLKFR 214
Query: 219 RELFFHALNQYNLRDRRFGG 238
+ + A+ + R+RR+G
Sbjct: 215 KIDLYRAVRDFQWRERRYGR 234
>gi|237800147|ref|ZP_04588608.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|331023004|gb|EGI03061.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv.
oryzae str. 1_6]
Length = 99
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 38/90 (42%), Positives = 55/90 (61%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
SS P H+ IIMDGN RWA R LP AGH+ G++ ++ AE ++ LT+FAFS
Sbjct: 9 PSSVPRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAEAKVEVLTLFAFSSE 68
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKN 96
NW+RP E+ L++L + L++ L +N
Sbjct: 69 NWQRPAEEVGALMELFFTALRRETKRLNEN 98
>gi|221487943|gb|EEE26175.1| dehydrodolichyl diphosphate synthase, putative [Toxoplasma gondii
GT1]
Length = 270
Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 12/154 (7%)
Query: 7 SSSPPDHIGIIMDGNGRWAAA-RGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
P H+ IMDGN R+A + GHR G + + + E+GI+ +T++AF++
Sbjct: 22 PQHMPRHVAFIMDGNRRFARRNKEASAVEGHRAGAHTLSVMCESCLELGIQFVTVYAFAL 81
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFY---SLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
N+ R E++ L+ L + + K+ I++R +G+ L + L A
Sbjct: 82 GNFHRQPEEVTGLLNLAEEKFADKAWIDGFFKRLGIRLRFLGDFSYLPPRLRSALATASR 141
Query: 123 QTRL--------NTGLNLFIAFNYSSRDEISRAI 148
+T L + + Y SR EI+RA+
Sbjct: 142 ETADACGDPRGFGCRLLVTVCVAYGSRREIARAL 175
>gi|330975396|gb|EGH75462.1| undecaprenyl diphosphate synthase [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 95
Score = 121 bits (305), Expect = 6e-26, Method: Composition-based stats.
Identities = 39/87 (44%), Positives = 54/87 (62%)
Query: 156 ESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWP 215
++G + D+ L+ L T D+P PDL IRTGGE R+S+FLLWQ+AY+E F +WP
Sbjct: 2 QAGHLQPEDITPQLLQTCLATGDLPLPDLCIRTGGEHRISNFLLWQLAYAELYFSDLFWP 61
Query: 216 DFSRELFFHALNQYNLRDRRFGGLSKK 242
DF + AL + R RRFG S++
Sbjct: 62 DFKHDAMRAALADFASRQRRFGKTSEQ 88
>gi|322368362|ref|ZP_08042931.1| hypothetical protein ZOD2009_02730 [Haladaptatus paucihalophilus
DX253]
gi|320552378|gb|EFW94023.1| hypothetical protein ZOD2009_02730 [Haladaptatus paucihalophilus
DX253]
Length = 202
Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats.
Identities = 56/231 (24%), Positives = 94/231 (40%), Gaps = 45/231 (19%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+ PP H+ +++ R L + E A + G + +T++
Sbjct: 17 ADPPSHVAVVI-------TERDLLEQGAY----ETLESFFQWAFDYGAERITVY------ 59
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
+S L L++ +++ + V G D
Sbjct: 60 -------VSVLDSGAVPTLERELENVRAPR-SIAVRGPDDLTPADAP------------- 98
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+ I+ + E + A++ + +D+E+G+V + D+D S I L DPDL+I+
Sbjct: 99 ----IQISIGLGGKHEFAEAVRAVAEDVEAGTVSAADIDESEIESRLVFP--TDPDLVIK 152
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
TG E RLSDF++WQ YSE F W DF + + A+ Y R RRFG
Sbjct: 153 TGAE-RLSDFMIWQSVYSELYFTDVNWRDFRKRDYLRAIFDYKNRQRRFGR 202
>gi|224157244|ref|XP_002337819.1| predicted protein [Populus trichocarpa]
gi|222869858|gb|EEF06989.1| predicted protein [Populus trichocarpa]
Length = 199
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 43/198 (21%), Positives = 77/198 (38%), Gaps = 18/198 (9%)
Query: 63 FSINNWRRPVSEISELVKLIKSF---LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
FSI+N+++ I L+ L K + + I+V GN L + + +
Sbjct: 1 FSIDNFKQRPDGIQPLMDSFLEHVEGLMKEDSLVSRYGIRVYFQGNLELLSEPVRLAAEN 60
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIE---------SGSVCSHDVDSSLI 170
A T N+ L L + Y+S + I A++ ++ + + D
Sbjct: 61 AMLATAHNSKLLLIVCIAYTSTNVIVHAVQESCREKWGGIIVLNESAEPEENEKNDGESF 120
Query: 171 ------AKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFH 224
K + + +PD++IRT G+ RLS FLLWQ + F +WP+
Sbjct: 121 VKVTDVDKNMYMAIAAEPDILIRTSGDTRLSYFLLWQTTCTYLYFPSAFWPEIGFRHLLW 180
Query: 225 ALNQYNLRDRRFGGLSKK 242
A+ + + K+
Sbjct: 181 AILNFQRHHQYLNKRKKQ 198
>gi|167957223|ref|ZP_02544297.1| Undecaprenyl pyrophosphate synthetase [candidate division TM7
single-cell isolate TM7c]
Length = 88
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 38/78 (48%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 163 HDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELF 222
++ +KYL +D PDPDL+IRT GE R+S+FLLWQ+AYSEF WPDF +
Sbjct: 10 ENITEEDFSKYLY-NDFPDPDLVIRTSGEMRISNFLLWQIAYSEFYITDTLWPDFDEKEI 68
Query: 223 FHALNQYNLRDRRFGGLS 240
A+ +N R+RRFGG+
Sbjct: 69 DKAIESFNQRERRFGGVK 86
>gi|330508960|ref|YP_004385388.1| di-trans,poly-cis-decaprenylcistransferase [Methanosaeta concilii
GP-6]
gi|328929768|gb|AEB69570.1| di-trans,poly-cis-decaprenylcistransferase [Methanosaeta concilii
GP-6]
Length = 203
Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats.
Identities = 54/238 (22%), Positives = 95/238 (39%), Gaps = 44/238 (18%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + ++ P I I+ L +G++ +I+ + +G+ +L +
Sbjct: 10 LEMRISKANLPGCIAIV------------LSSGDLFDEGLDKLRDIIEWSRSMGLASLVL 57
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ N P L + I L+ I +A
Sbjct: 58 YI----NDNEPT-----LCQKIADTLRS--------------------SPAQISLHTADA 88
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ T + + ++ Y + E++ A +++ ++E G + D+D I L S
Sbjct: 89 DLLTGSGGRMRVTVSLGYGGKREVTEAFRDLLSEVEEGRLIPEDIDEKAIESRLRFSQ-- 146
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PDL+IR GG K+LSDF++WQ AYSE F W + F A+ Y R+RRFG
Sbjct: 147 KPDLVIRAGG-KQLSDFMIWQSAYSELYFTDVNWLRLRKIDFLRAIRDYQGRERRFGR 203
>gi|20093189|ref|NP_619264.1| undecaprenyl diphosphate synthase [Methanosarcina acetivorans C2A]
gi|19918535|gb|AAM07744.1| undecaprenyl diphosphate synthase [Methanosarcina acetivorans C2A]
Length = 224
Score = 118 bits (297), Expect = 5e-25, Method: Composition-based stats.
Identities = 53/232 (22%), Positives = 99/232 (42%), Gaps = 30/232 (12%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
++ P H+ II+ L KG+E + ++ ++I+
Sbjct: 23 TTKTPAHVAIIL-------KETDLLEP----KGMEKLLSALLIFKRYNVELVSIY----- 66
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
+ L + LK S +I+ + S + L+ +R
Sbjct: 67 --------VDILKA--EQPLKTELASTLGTSIE-EIFTCLSSETGYKIHGLEGEVKSSRQ 115
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
++++ + R EI+RA+ +I +++++GSV +VD ++ +L +PD++I
Sbjct: 116 GKDFFVYVSLGFGGRGEITRAVLSILEEVKTGSVSPEEVDEKMLESHLLVKH--EPDIMI 173
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R+GG ++LSDFL+WQ YSE F W D R + + R RR+G
Sbjct: 174 RSGG-QKLSDFLVWQSVYSELYFTDVNWKDVRRIDLLRVIRDFQKRQRRYGK 224
>gi|15790699|ref|NP_280523.1| hypothetical protein VNG1781C [Halobacterium sp. NRC-1]
gi|10581235|gb|AAG20003.1| conserved hypothetical protein [Halobacterium sp. NRC-1]
Length = 326
Score = 118 bits (297), Expect = 6e-25, Method: Composition-based stats.
Identities = 44/200 (22%), Positives = 81/200 (40%), Gaps = 34/200 (17%)
Query: 39 GIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNI 98
+ + A A + G+ +T++ +S L L++
Sbjct: 161 AYDTLADFYAWAFDSGVDRITVY-------------VSVLDAAAVPTLEREL-------- 199
Query: 99 KVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESG 158
GN + + + + E + ++ + + E + A++++ + +G
Sbjct: 200 -----GNVAAPREVAVRGPDDDERADAP-----IQVSVGHGGKHEFATAVRSVADAVAAG 249
Query: 159 SVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS 218
+ +D +I L +PDL+I+TG E RLSDF++WQ YSE F W DF
Sbjct: 250 DLDPDAIDEDVIESELVFP--AEPDLVIKTGAE-RLSDFMIWQSVYSELYFTDVNWRDFR 306
Query: 219 RELFFHALNQYNLRDRRFGG 238
+ + A+ Y R RRFG
Sbjct: 307 KRDYLRAVLDYQNRQRRFGR 326
>gi|289670227|ref|ZP_06491302.1| undecaprenyl pyrophosphate synthase [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 110
Score = 118 bits (297), Expect = 6e-25, Method: Composition-based stats.
Identities = 37/89 (41%), Positives = 57/89 (64%)
Query: 154 DIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEY 213
D+ +G + +D +L++ + +D+P PDL IRTGG+ R+S+FLLWQ+AY+E F
Sbjct: 11 DVAAGRLQPEQIDEALLSSRVALADLPAPDLFIRTGGDTRISNFLLWQLAYTELWFTETL 70
Query: 214 WPDFSRELFFHALNQYNLRDRRFGGLSKK 242
WP+F + AL+ Y R+RRFG S +
Sbjct: 71 WPEFDAGVLQQALDDYAGRERRFGLTSAQ 99
>gi|21227185|ref|NP_633107.1| undecaprenyl pyrophosphate synthetase [Methanosarcina mazei Go1]
gi|20905523|gb|AAM30779.1| Undecaprenyl pyrophosphate synthetase [Methanosarcina mazei Go1]
Length = 224
Score = 118 bits (297), Expect = 6e-25, Method: Composition-based stats.
Identities = 50/232 (21%), Positives = 99/232 (42%), Gaps = 30/232 (12%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
++ P H+ +I+ L KGIE + + ++ ++I+
Sbjct: 23 ATKIPAHVALIL-------KEADLLE----YKGIEKLLTALLTFRKFKVELVSIY----- 66
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
+ L +K S ++ +G +I C L+ + +R
Sbjct: 67 --------VDILKA--DQTMKAELASTLGEQLEESFMGLPSGTGYEI-CGLEGEVNCSRQ 115
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
++++ + R EI+RA+ +I ++++G + +VD ++ +L +PD++I
Sbjct: 116 GKDFFVYLSLGFGGRGEITRAVISILDEVKAGRIRPEEVDEKMLESHLLVKH--EPDIMI 173
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
R+GG ++LSDFL+WQ YSE F W D + + + R RR+G
Sbjct: 174 RSGG-QKLSDFLVWQSVYSELYFTDVNWKDVRKIDLLRVIRDFQKRQRRYGK 224
>gi|116754793|ref|YP_843911.1| undecaprenyl diphosphate synthase [Methanosaeta thermophila PT]
gi|116666244|gb|ABK15271.1| undecaprenyl diphosphate synthase [Methanosaeta thermophila PT]
Length = 186
Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats.
Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 33/201 (16%)
Query: 38 KGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNN 97
G+E F +++ +A +GI+NL I + +L ++S LK
Sbjct: 19 HGLEKFRDLIEWSASLGIENLLIHVGQHSG---------DLASPLESMLKDA-------- 61
Query: 98 IKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIES 157
+ ++ ++ G+++ I+ Y + E++ AI+++ D+ +
Sbjct: 62 -------------PADVSIIDADRSKSTGKGGISVTISLGYGGKREVTEAIRSVLMDVAA 108
Query: 158 GSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDF 217
G + ++D + I +YL PDL+IR GG +RLSDF++WQ AYSE F W
Sbjct: 109 GLIEPEEIDRNTIERYLRFKQ--KPDLVIRAGG-RRLSDFMIWQAAYSELYFTDVDWASL 165
Query: 218 SRELFFHALNQYNLRDRRFGG 238
R F A+ + R+RRFG
Sbjct: 166 RRLDFLRAIRDFQRRERRFGR 186
>gi|56206242|emb|CAI21494.1| dehydrodolichyl diphosphate synthase [Homo sapiens]
Length = 155
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 3/145 (2%)
Query: 31 PRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSF---LK 87
R GH +G E + +GI +T++AFSI N++R SE+ L+ L + L
Sbjct: 3 ERQEGHSQGFNKLAETLRWCLNLGILEVTVYAFSIENFKRSKSEVDGLMDLARQKFSRLM 62
Query: 88 KGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRA 147
+ L+K+ + +RV+G+ L D+ ++ +A T+ L + F Y+SR EIS A
Sbjct: 63 EEKEKLQKHGVCIRVLGDLHLLPLDLQELIAQAVQATKNYNKCFLNVCFAYTSRHEISNA 122
Query: 148 IKNIFQDIESGSVCSHDVDSSLIAK 172
++ + +E G + I +
Sbjct: 123 VREMAWGVEQGLLDPSRDRFHHIGQ 147
>gi|206994193|emb|CAR79337.1| dehydrodolichyl diphosphate synthase [Oncorhynchus mykiss]
Length = 107
Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 45/88 (51%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ + P H+ IMDGN R+A R + R GH +G + E + + I +T++AFS
Sbjct: 20 LKAGPMPKHVAFIMDGNRRYARKRHVERQEGHTQGFDKLAETLRWCLNLSIHEVTVYAFS 79
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYS 92
I N++R E+ L++L K +
Sbjct: 80 IENFKRSKDEVDGLMELAKQKFIRLLQE 107
>gi|313125505|ref|YP_004035769.1| undecaprenyl diphosphate synthase [Halogeometricum borinquense DSM
11551]
gi|312291870|gb|ADQ66330.1| undecaprenyl diphosphate synthase [Halogeometricum borinquense DSM
11551]
Length = 202
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 51/229 (22%), Positives = 96/229 (41%), Gaps = 47/229 (20%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ +++ R L + E + A E G + +T+
Sbjct: 20 PSHVAVVI-------TERDLLEQGAY----ETLERFLRWAFEFGAERVTVS--------- 59
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNN-IKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
+S L + + L++ ++ + VR G+R D+ +
Sbjct: 60 ----VSVLDEAVVPTLERELRDIESPRSMAVRGPGDRERADEPVQ--------------- 100
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTG 189
++ + E + +++I +D+++G + D+ + + + L D +PDL+I+TG
Sbjct: 101 ----VSIGLGGKREFADVVRDIAEDVDAGDLSPEDIGAEHVEERLVFQD--EPDLLIKTG 154
Query: 190 GEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E RLSDF++WQ YSE F W DF + + A+ + R RRFG
Sbjct: 155 AE-RLSDFMIWQSVYSELYFTDVNWRDFRKRDYLRAVLDFQNRQRRFGR 202
>gi|226327050|ref|ZP_03802568.1| hypothetical protein PROPEN_00911 [Proteus penneri ATCC 35198]
gi|225204268|gb|EEG86622.1| hypothetical protein PROPEN_00911 [Proteus penneri ATCC 35198]
Length = 89
Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 36/81 (44%), Positives = 52/81 (64%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSIN 66
S+S P H+ IIMDGNGRWA +G R GHR GI+ + V+ + + I++LT++AFS
Sbjct: 9 SASKPKHVAIIMDGNGRWAKKQGKLRVTGHRAGIKAVRDAVSFSVKHKIESLTLYAFSSE 68
Query: 67 NWRRPVSEISELVKLIKSFLK 87
NW RP E+S L++L +
Sbjct: 69 NWNRPEQEVSSLMELFVFCFR 89
>gi|108800549|ref|YP_640746.1| di-trans-poly-cis-decaprenylcistransferase [Mycobacterium sp. MCS]
gi|119869688|ref|YP_939640.1| di-trans-poly-cis-decaprenylcistransferase [Mycobacterium sp. KMS]
gi|126436165|ref|YP_001071856.1| di-trans-poly-cis-decaprenylcistransferase [Mycobacterium sp. JLS]
gi|108770968|gb|ABG09690.1| Di-trans-poly-cis-decaprenylcistransferase [Mycobacterium sp. MCS]
gi|119695777|gb|ABL92850.1| Di-trans-poly-cis-decaprenylcistransferase [Mycobacterium sp. KMS]
gi|126235965|gb|ABN99365.1| Di-trans-poly-cis-decaprenylcistransferase [Mycobacterium sp. JLS]
Length = 210
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 54/223 (24%), Positives = 90/223 (40%), Gaps = 21/223 (9%)
Query: 15 GIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSE 74
G+I DG RWA A +R+G +I+ A E G++ ++++ S N R E
Sbjct: 2 GLIPDGLRRWADANKATLVDAYRRGAMKVVDILLALQEHGVQTVSVYNLSRANLARRDDE 61
Query: 75 ISELVKLIKSFLKKGFYSLKKNNIK-VRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLF 133
+ + F + + VR+ G+ L D+ + + +QT +
Sbjct: 62 LEAVFAASTHFFSTLIPANFDHTACGVRIHGDLDLLPDEYVAA-ARSVEQTMTGRDFRIN 120
Query: 134 IAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKR 193
I Y + DE+ RA + D+ ++L ++ D DL+IRT E
Sbjct: 121 ILAAYDAADEL-RAAHRRARQNGC------DITAAL--------EIGDVDLVIRTTPEPL 165
Query: 194 LSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
LS FL Q Y++ +F+ D R + Y RRF
Sbjct: 166 LSGFLPLQSQYAQLMFLTTALNDLQRADIDDLIADY----RRF 204
>gi|298675729|ref|YP_003727479.1| Di-trans-poly-cis-decaprenylcistransferase [Methanohalobium
evestigatum Z-7303]
gi|298288717|gb|ADI74683.1| Di-trans-poly-cis-decaprenylcistransferase [Methanohalobium
evestigatum Z-7303]
Length = 221
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 50/241 (20%), Positives = 100/241 (41%), Gaps = 34/241 (14%)
Query: 1 MVASMMSSS--PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNL 58
++ + S P+H+ I++ + G+ ++ ++GI +
Sbjct: 12 LLRKIKKSPDKVPEHVTIVL-----------SDTDISGKDGLSKLFSVILWYRKLGINII 60
Query: 59 TIFA-FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+I+ S ++ IS L+ + L K+ +G + ++ L
Sbjct: 61 SIYVNLSTGGKNLSINGISY----PVEMLETRSHRLPKD------VGFEIYDNNGYLKKE 110
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
+ + +++++ + + EI+ A++++ D+ S + D+D + I L
Sbjct: 111 HK-------GSSMHVYLFLGFGGKSEITNAVRSVLSDVSSQKIDPEDIDENEIESRLLVK 163
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+PD+IIR GG K LSDFL+WQ YSE F W + A+ + R R+FG
Sbjct: 164 H--EPDMIIRAGG-KNLSDFLIWQSVYSELYFTDVNWDKVRKIDMIRAIRDFQKRQRKFG 220
Query: 238 G 238
Sbjct: 221 K 221
>gi|260204330|ref|ZP_05771821.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis K85]
gi|289573742|ref|ZP_06453969.1| short chain Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis K85]
gi|289538173|gb|EFD42751.1| short chain Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis K85]
Length = 171
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 37/146 (25%), Positives = 68/146 (46%), Gaps = 3/146 (2%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
S P HI ++ DGN RWA + G G+R G E++ E GI+ T++ S
Sbjct: 28 KSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWCHEAGIELATVYLLST 87
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
N +R E++ L+++I +++ N+ VR +G+ + ++ L+ A + T
Sbjct: 88 ENLQRDPDELAALIEIITDVVEE--ICAPANHWSVRTVGDLGLIGEEPARRLRGAVESTP 145
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNI 151
++ +A Y R EI ++
Sbjct: 146 EVASFHVNVAVGYGGRREIVDVVRAR 171
>gi|289670226|ref|ZP_06491301.1| undecaprenyl pyrophosphate synthase [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 108
Score = 115 bits (287), Expect = 7e-24, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 55/108 (50%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGNGRWA R PR GHR G N + E G+ LT+FAFS NW RP E+
Sbjct: 1 MDGNGRWAQRRRRPRVIGHRAGARAVNRTIDFCLEKGVSALTLFAFSSENWGRPQDEVDA 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
L+KL L + L++ ++VR IG+R + + AE T
Sbjct: 61 LMKLFLHALDREVEELQRRGVQVRFIGDRSRFAAPLRDRMAGAERSTA 108
>gi|169236440|ref|YP_001689640.1| di-trans,poly-cis-decaprenylcistransferase / (Z)-prenyl diphosphate
synthase [Halobacterium salinarum R1]
gi|167727506|emb|CAP14294.1| di-trans,poly-cis-decaprenylcistransferase / (Z)-prenyl diphosphate
synthase [Halobacterium salinarum R1]
Length = 202
Score = 115 bits (287), Expect = 8e-24, Method: Composition-based stats.
Identities = 44/200 (22%), Positives = 81/200 (40%), Gaps = 34/200 (17%)
Query: 39 GIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNI 98
+ + A A + G+ +T++ +S L L++
Sbjct: 37 AYDTLADFYAWAFDSGVDRITVY-------------VSVLDAAAVPTLEREL-------- 75
Query: 99 KVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESG 158
GN + + + + E + ++ + + E + A++++ + +G
Sbjct: 76 -----GNVAAPREVAVRGPDDDERADAP-----IQVSVGHGGKHEFATAVRSVADAVAAG 125
Query: 159 SVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS 218
+ +D +I L +PDL+I+TG E RLSDF++WQ YSE F W DF
Sbjct: 126 DLDPDAIDEDVIESELVFP--AEPDLVIKTGAE-RLSDFMIWQSVYSELYFTDVNWRDFR 182
Query: 219 RELFFHALNQYNLRDRRFGG 238
+ + A+ Y R RRFG
Sbjct: 183 KRDYLRAVLDYQNRQRRFGR 202
>gi|169838900|ref|ZP_02872088.1| Undecaprenyl pyrophosphate synthetase [candidate division TM7
single-cell isolate TM7a]
Length = 115
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 36/70 (51%), Positives = 45/70 (64%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P HI IIMDGNGRWA RG R GHR G I+ A E+G+K LT++AFS NW+
Sbjct: 8 IPRHIAIIMDGNGRWAKERGKIRLEGHRAGAASLERILRYAGEIGVKYLTVYAFSTENWK 67
Query: 70 RPVSEISELV 79
RP E++ L+
Sbjct: 68 RPQKEVNGLM 77
>gi|302349063|ref|YP_003816701.1| Undecaprenyl pyrophosphate synthetase [Acidilobus saccharovorans
345-15]
gi|302329475|gb|ADL19670.1| Undecaprenyl pyrophosphate synthetase [Acidilobus saccharovorans
345-15]
Length = 163
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 48/182 (26%), Positives = 76/182 (41%), Gaps = 22/182 (12%)
Query: 60 IFAFSINNW-RRPVSEISELVKLIKSFLKKGF--YSLKKNNIKVRVIGNRLSLDDDILCV 116
++ S N RR E + L L+ + L+ + I VR++G+ + +
Sbjct: 1 MYVLSYENCTRRSPIEKAVLEDLLVNGLRDLRSDPIINGERISVRLVGDLSLVSEAARRE 60
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT 176
E+ T G +L + YS E + + + + L
Sbjct: 61 GAALEEHTASYDGGSLHLGVCYSGEWE------------------RNVIATGTASPSLA- 101
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
+ VP DL+IRTGG +RLS F Q +Y+E F WP+F+RE AL + L+ R F
Sbjct: 102 AGVPPIDLVIRTGGMRRLSGFFPLQTSYAELYFTETLWPEFTREELKKALEWFELQKRNF 161
Query: 237 GG 238
G
Sbjct: 162 GA 163
>gi|110669209|ref|YP_659020.1| di-trans,poly-cis-decaprenylcistransferase [Haloquadratum walsbyi
DSM 16790]
gi|109626956|emb|CAJ53428.1| di-trans,poly-cis-decaprenylcistransferase [Haloquadratum walsbyi
DSM 16790]
Length = 202
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 61/231 (26%), Positives = 92/231 (39%), Gaps = 47/231 (20%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+ PP H+ +++ R L ++ ++ + A E G +TI
Sbjct: 17 AKPPAHVAVVI-------TERDLLEQGAYQ----TLSQFLNWAFEYGATRVTIS------ 59
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNN-IKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
+S L + + L + F L I VR N D I
Sbjct: 60 -------VSVLDEAVVPTLAREFRDLTTPRSIVVRQPSNTEPADAPIQ------------ 100
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
+ + E + A++ I + ++ GS+ VD+ I L D +PDL+I
Sbjct: 101 -------VNIGLGGKREFAAAVRQIAEAVDEGSIDPDTVDADTIEDRLVFDD--EPDLVI 151
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+TG E RLSDFL+WQ YSE F W DF R + A+ Y R RRFG
Sbjct: 152 KTGAE-RLSDFLIWQSVYSELYFTDVNWRDFRRRDYVRAVIDYQNRQRRFG 201
>gi|292656446|ref|YP_003536343.1| Undecaprenyl pyrophosphate synthetase [Haloferax volcanii DS2]
gi|291371120|gb|ADE03347.1| Undecaprenyl pyrophosphate synthetase [Haloferax volcanii DS2]
Length = 202
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 51/239 (21%), Positives = 97/239 (40%), Gaps = 47/239 (19%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ + + P+H+ +++ R L + E V A E G +TI
Sbjct: 10 LRFRLDDADAPEHVALVI-------TERDLLEQGAY----ETLEAFVGWAFEFGSDRVTI 58
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLK-KNNIKVRVIGNRLSLDDDILCVLKE 119
+S L + + L + L + +++R G+ D +
Sbjct: 59 S-------------VSVLDEAVVPTLARELRDLDVPHRVELREPGDTERADAPVQ----- 100
Query: 120 AEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV 179
++ + E + ++++ +++ G++ D+D++ I + L D
Sbjct: 101 --------------VSIGLGGKREFASVVRSLAGEVDEGALEPDDIDAADIEQRLVFPD- 145
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+PD +++TG E RLSDF++WQ Y+E F W DF + + AL Y R RRFG
Sbjct: 146 -EPDFVVKTGAE-RLSDFMIWQSVYAELYFTDVNWRDFRKRDYLRALRDYQDRQRRFGR 202
>gi|213419022|ref|ZP_03352088.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
Length = 79
Score = 111 bits (279), Expect = 6e-23, Method: Composition-based stats.
Identities = 32/73 (43%), Positives = 46/73 (63%)
Query: 168 SLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALN 227
+ + + ++ DL+IRTGGE R+S+FLLWQ+AY+E F WPDF + F AL+
Sbjct: 1 ERLGQQICMHELAPVDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALH 60
Query: 228 QYNLRDRRFGGLS 240
+ R+RRFGG
Sbjct: 61 AFANRERRFGGTE 73
>gi|308446618|ref|XP_003087223.1| hypothetical protein CRE_13882 [Caenorhabditis remanei]
gi|308259556|gb|EFP03509.1| hypothetical protein CRE_13882 [Caenorhabditis remanei]
Length = 148
Score = 111 bits (279), Expect = 6e-23, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGL-PRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ S P H+ +MDGN R+A ++ L GH KG +I+ GI+ +T++AF
Sbjct: 31 IASGPIPRHVAFVMDGNRRFAKSKHLGNVIKGHEKGFVQLAKILDWCNRFGIREITVYAF 90
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSL 109
SI N++R E++ L++L + +K L + I R GNR L
Sbjct: 91 SIENFKRSEDEVTGLMRLAEEKFQKLLNDSEKLDEKRICFRFYGNRSLL 139
>gi|302825792|ref|XP_002994478.1| hypothetical protein SELMODRAFT_432400 [Selaginella moellendorffii]
gi|300137561|gb|EFJ04456.1| hypothetical protein SELMODRAFT_432400 [Selaginella moellendorffii]
Length = 167
Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats.
Identities = 40/87 (45%), Positives = 53/87 (60%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ P+H+ IIMDGN RWA RGL GH G+ EIVAA++ +GIK LT+FA
Sbjct: 75 RELDPLRMPEHVAIIMDGNSRWAKLRGLATDRGHEAGVHALREIVAASSRLGIKTLTVFA 134
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKG 89
FS NWRRP EI L++L + + +
Sbjct: 135 FSTENWRRPTIEIQFLMQLFERVISED 161
>gi|309807181|ref|ZP_07701155.1| di-trans,poly-cis-decaprenylcistransferase-like protein
[Lactobacillus iners LactinV 03V1-b]
gi|308166402|gb|EFO68607.1| di-trans,poly-cis-decaprenylcistransferase-like protein
[Lactobacillus iners LactinV 03V1-b]
Length = 107
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 42/83 (50%), Positives = 53/83 (63%)
Query: 13 HIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
H+ IIMDGNGRWA R LPR GHR G+ EI A E+G+K LT++AFS NW RP
Sbjct: 10 HLAIIMDGNGRWAQERHLPRIIGHRSGMNKVKEIALVANELGVKVLTLYAFSTENWGRPR 69
Query: 73 SEISELVKLIKSFLKKGFYSLKK 95
E++ L+KL +FL S +K
Sbjct: 70 DEVNYLMKLPINFLINLCQSCRK 92
>gi|76802905|ref|YP_331000.1| di-trans,poly-cis-decaprenylcistransferase 2; (Z)-prenyl
diphosphate synthase 2 [Natronomonas pharaonis DSM 2160]
gi|76558770|emb|CAI50363.1| di-trans,poly-cis-decaprenylcistransferase 2; (Z)-prenyl
diphosphate synthase 2 [Natronomonas pharaonis DSM 2160]
Length = 202
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 56/235 (23%), Positives = 93/235 (39%), Gaps = 45/235 (19%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
+ + P+HI +++ R L + A + G + +TI+
Sbjct: 13 RLSNEDAPNHIALVI-------TERDLLEP----NAYGTLTSFLRWAFDTGTETVTIY-- 59
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
+S L L++ L+ +V + G D
Sbjct: 60 -----------VSVLDAEAIPTLRQTLSELESPR-EVAIRGPEADAPADAP--------- 98
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
+ ++ R+E + A++ I +D +G++ D+D S I + L + PD
Sbjct: 99 --------VQVSIGLGGREEFAAAVRQIAEDAAAGALAPDDIDESEIERRLVFRNQ--PD 148
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L+I+TG E RLSDFL+WQ YSE F W F R F A+ ++ R RRFG
Sbjct: 149 LVIKTGAE-RLSDFLIWQSVYSELYFTDVNWRAFRRRDFLRAVREFQERQRRFGR 202
>gi|307352896|ref|YP_003893947.1| Di-trans-poly-cis-decaprenylcistransferase [Methanoplanus
petrolearius DSM 11571]
gi|307156129|gb|ADN35509.1| Di-trans-poly-cis-decaprenylcistransferase [Methanoplanus
petrolearius DSM 11571]
Length = 219
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 52/198 (26%), Positives = 82/198 (41%), Gaps = 36/198 (18%)
Query: 41 EVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKV 100
E NE+ ++GI ++T +N +KSFL+K + +
Sbjct: 58 EKTNEVAKWCCDLGISHITFHV-DTDNP-----------GGLKSFLEKLKEISGFAQVNI 105
Query: 101 RVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSV 160
G + + G ++ +A S R+EI R I+++ Q+
Sbjct: 106 YCAGEKFVAGE-----------------GADVHVAIGVSGREEIVRCIRHMAQEKLH--- 145
Query: 161 CSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRE 220
DVD +I +L +PDL+I+ GG L+DFL+WQ YSE F W +F +
Sbjct: 146 -PKDVDEEMIESHLSFRY--EPDLVIKAGG-SHLTDFLIWQSVYSELFFTDVNWSEFRKI 201
Query: 221 LFFHALNQYNLRDRRFGG 238
AL Y R RR+G
Sbjct: 202 DLLRALRDYQTRKRRYGK 219
>gi|309804304|ref|ZP_07698381.1| di-trans,poly-cis-decaprenylcistransferase-like protein
[Lactobacillus iners LactinV 11V1-d]
gi|308163707|gb|EFO65977.1| di-trans,poly-cis-decaprenylcistransferase-like protein
[Lactobacillus iners LactinV 11V1-d]
Length = 74
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 39/74 (52%), Positives = 53/74 (71%), Gaps = 3/74 (4%)
Query: 169 LIAKYLDTS---DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHA 225
+++ YL T+ D DPDL+IRT GE+RLS+F+LWQ+AYSEF F YWPDF+ + F
Sbjct: 1 MVSDYLMTAKFGDYADPDLLIRTSGEERLSNFMLWQLAYSEFYFTKTYWPDFTTDEFKKI 60
Query: 226 LNQYNLRDRRFGGL 239
+ +Y RDRRFG +
Sbjct: 61 VEEYQHRDRRFGKI 74
>gi|255728575|ref|XP_002549213.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240133529|gb|EER33085.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 195
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 49/151 (32%), Positives = 79/151 (52%), Gaps = 5/151 (3%)
Query: 85 FLKKGFYSLKKNN-IKVRVIGNRLSLDDDILCVLKEAEDQTRLNT-GLNLFIAFNYSSRD 142
+ + S + N +++R+IGNR + DIL L+ E+ T+ ++ L + F Y++RD
Sbjct: 1 MISEHEDSYARYNKVRIRIIGNRSYIPSDILKDLENIEEITKDHSSKKTLNVCFPYTARD 60
Query: 143 EISRAIKNIFQDIESGSVCS-HDVDSSLIAKYLDTS-DVPDPDLIIRTGGEKRLSDFLLW 200
EI+ A+K I + +G + S ++ + I + DVP D++IRT G RLSDFLLW
Sbjct: 61 EITYAVKRIAEKRVNGEITSRDEITTKTIEENFYFGGDVPPLDILIRTSGHTRLSDFLLW 120
Query: 201 QVA-YSEFVFIPEYWPDFSRELFFHALNQYN 230
Q F WPDF L +++
Sbjct: 121 QCNTECTIEFPDVLWPDFGFVSIISILFKWS 151
>gi|300710600|ref|YP_003736414.1| hypothetical protein HacjB3_06155 [Halalkalicoccus jeotgali B3]
gi|299124283|gb|ADJ14622.1| hypothetical protein HacjB3_06155 [Halalkalicoccus jeotgali B3]
Length = 202
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 53/228 (23%), Positives = 84/228 (36%), Gaps = 45/228 (19%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P H+ I++ R R E +++ A E +T++
Sbjct: 20 PSHVAIVI-----------TERDLLERGAYETLEDVLRWAFEYEADRVTVY--------- 59
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
+S L L + V V G DD V
Sbjct: 60 ----VSVLDPAAAPTLASELAEIDAPRA-VDVRG-----PDDTRRVDAP----------- 98
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ + + E +RA++ + ++E G + + I L D +PDL+I+TG
Sbjct: 99 -ISVGIGLGGKREFTRAVRGLAHEVERGERDPDGIRDADIESQLVFPD--EPDLLIKTGA 155
Query: 191 EKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E RLSDF++WQ Y+E F W DF + + A+ Y R RRFG
Sbjct: 156 E-RLSDFMIWQSVYAELYFTDVNWRDFRKRDYLRAVLDYKKRSRRFGR 202
>gi|329942494|ref|ZP_08291304.1| di-trans,poly-cis-decaprenylcistransferase [Chlamydophila psittaci
Cal10]
gi|328815404|gb|EGF85392.1| di-trans,poly-cis-decaprenylcistransferase [Chlamydophila psittaci
Cal10]
Length = 67
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 36/66 (54%), Positives = 44/66 (66%)
Query: 173 YLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLR 232
YLDTS++PDPDL+IRTGGE R+S+FLLWQ+AY+E WPDF A+ Y R
Sbjct: 2 YLDTSEIPDPDLLIRTGGEMRVSNFLLWQIAYTELYVTDVLWPDFKPYHLLDAIKAYQHR 61
Query: 233 DRRFGG 238
RR G
Sbjct: 62 SRRGGK 67
>gi|284166510|ref|YP_003404789.1| undecaprenyl diphosphate synthase [Haloterrigena turkmenica DSM
5511]
gi|284016165|gb|ADB62116.1| undecaprenyl diphosphate synthase [Haloterrigena turkmenica DSM
5511]
Length = 210
Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats.
Identities = 52/231 (22%), Positives = 89/231 (38%), Gaps = 46/231 (19%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
PDHI +++ R R + A A E + +T++
Sbjct: 26 GELPDHIALVI-----------TERDLLERDAYGTLTDFFAWAFEYATQ-VTVY------ 67
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
+S L L++ +L+ +V V G +
Sbjct: 68 -------VSVLDAAAVPALRRELETLEAPR-EVAVRGPDDRTPAEAP------------- 106
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+ I + E + A++ + + ++ G + ++D + +L +PDL+I+
Sbjct: 107 ----IRIGIGLGGKHEFTSAVRTLAEHVDDGQLAPEEIDDERVENHLVFP--SEPDLVIK 160
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
TG E RLSDF++WQ YSE F W DF + F A+ +Y R RRFG
Sbjct: 161 TGAE-RLSDFMIWQSVYSELYFTDVNWRDFRKRDFLRAVREYCNRSRRFGR 210
>gi|299472388|emb|CBN77576.1| Di-trans-poly-cis-decaprenylcistransferase [Ectocarpus siliculosus]
Length = 192
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 48/100 (48%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAF 63
++ P H+ +IMDGN R+ + GH G + E + E G+ T FAF
Sbjct: 73 TLSPRGAPRHVAVIMDGNRRFGRVKYGDPLKGHSDGGKRLGEFLEWCMEAGVAVATAFAF 132
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVI 103
S NW+R E+ L+ L+ + + K N+++RV+
Sbjct: 133 STENWKRDAHEVKLLMDLVCTSCGELMEDAGKKNMRIRVL 172
>gi|68479121|ref|XP_716366.1| hypothetical protein CaO19.12700 [Candida albicans SC5314]
gi|68479252|ref|XP_716305.1| hypothetical protein CaO19.5236 [Candida albicans SC5314]
gi|46437971|gb|EAK97309.1| hypothetical protein CaO19.5236 [Candida albicans SC5314]
gi|46438033|gb|EAK97370.1| hypothetical protein CaO19.12700 [Candida albicans SC5314]
gi|238878379|gb|EEQ42017.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 191
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 50/148 (33%), Positives = 74/148 (50%), Gaps = 4/148 (2%)
Query: 87 KKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL-NTGLNLFIAFNYSSRDEIS 145
+ + N +++R+IGNR + +DIL L+ E+ T+ + L + F Y++RDEI+
Sbjct: 3 EHEDSYARYNKVRIRIIGNRSFIPEDILKDLENVEETTKDFGSKKTLNVCFPYTARDEIT 62
Query: 146 RAIKNIFQDIESGS-VCSHDVDSSLIAKYLDTSD-VPDPDLIIRTGGEKRLSDFLLWQV- 202
AIK I SG + + + I K D VP D++IRT G RLSDFLLWQ
Sbjct: 63 YAIKTIASKRVSGELNDRNKITTKTIEKNFYFGDDVPPLDILIRTSGHTRLSDFLLWQCT 122
Query: 203 AYSEFVFIPEYWPDFSRELFFHALNQYN 230
F WPDF L +++
Sbjct: 123 TECTIEFPDVLWPDFGFISIMSILFKWS 150
>gi|117662873|gb|ABK55727.1| dehydrodolichyl diphosphate synthase [Cucumis sativus]
Length = 117
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 58/117 (49%)
Query: 24 WAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIK 83
W A + GH G+ E+V E I L++FAFS +NW R E+ L+ L +
Sbjct: 1 WELAMNMADSKGHDAGVRSLREMVDLCLEWDIPVLSVFAFSYDNWLRSKREVEFLMFLFE 60
Query: 84 SFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSS 140
LK + I++ VIG+ L + ++ EA ++T+ NT L L +A +YS
Sbjct: 61 RVLKSEMEKSSRKGIRLSVIGDLSLLPKSLQNLINEAVERTKSNTKLQLIVAASYSG 117
>gi|289675261|ref|ZP_06496151.1| undecaprenyl pyrophosphate synthetase [Pseudomonas syringae pv.
syringae FF5]
Length = 77
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 46/74 (62%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + SS P H+ IIMDGN RWA R LP AGH+ G++ ++ AE ++ LT+F
Sbjct: 4 IKPAVPSSVPRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAEARVEVLTLF 63
Query: 62 AFSINNWRRPVSEI 75
AFS NW+RP + +
Sbjct: 64 AFSSENWQRPAAAV 77
>gi|257387596|ref|YP_003177369.1| undecaprenyl diphosphate synthase [Halomicrobium mukohataei DSM
12286]
gi|257169903|gb|ACV47662.1| undecaprenyl diphosphate synthase [Halomicrobium mukohataei DSM
12286]
Length = 202
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+ ++ + E + A+++I Q + G + ++D S++ + L PDL+++TG E
Sbjct: 99 IGVSIGLGGKHEFAIAVRSIAQSVADGDLAPDEIDESVVEEQLVFPTA--PDLVVKTGAE 156
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
RLSDF++WQ YSE F W +F + AL Y R RRFG
Sbjct: 157 -RLSDFMIWQSVYSELYFTDVNWQNFGERDYLRALRDYQDRQRRFGR 202
>gi|318079182|ref|ZP_07986514.1| undecaprenyl diphosphate synthase [Streptomyces sp. SA3_actF]
Length = 109
Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 35/81 (43%), Positives = 49/81 (60%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A+ + P H+ +MDGNGRWA R LPR AGHR +I+ AA GI+ L+++A
Sbjct: 28 AATRTGRGPRHVACVMDGNGRWAERRSLPRTAGHRAAETTVIDIIEAARSAGIEWLSLYA 87
Query: 63 FSINNWRRPVSEISELVKLIK 83
FS NW RP +E+ L+ L +
Sbjct: 88 FSTENWSRPSAEVGYLMDLGR 108
>gi|70954337|ref|XP_746220.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56526760|emb|CAH77319.1| hypothetical protein PC000141.02.0 [Plasmodium chabaudi chabaudi]
Length = 135
Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 4/107 (3%)
Query: 13 HI-GIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
HI IIMDGN R+A GL GH G + I+ ++ IK L++FAFS+ N+ R
Sbjct: 29 HIEAIIMDGNRRFAKQMGLQTSIGHYLGSKNLMHIIEICIQLNIKILSVFAFSLLNYNRT 88
Query: 72 VSEISELVKLIKSFLKKG---FYSLKKNNIKVRVIGNRLSLDDDILC 115
E+ L L FL +K+N I++R+IGN +++
Sbjct: 89 PEEVHVLFYLNLFFLINEEYFIKFVKQNKIRIRIIGNLSYINEAYRE 135
>gi|318058215|ref|ZP_07976938.1| undecaprenyl diphosphate synthase [Streptomyces sp. SA3_actG]
Length = 110
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 35/81 (43%), Positives = 49/81 (60%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A+ + P H+ +MDGNGRWA R LPR AGHR +I+ AA GI+ L+++A
Sbjct: 28 AATRTGRGPRHVACVMDGNGRWAERRSLPRTAGHRAAETTVIDIIEAARSAGIEWLSLYA 87
Query: 63 FSINNWRRPVSEISELVKLIK 83
FS NW RP +E+ L+ L +
Sbjct: 88 FSTENWSRPSAEVGYLMDLGR 108
>gi|222480070|ref|YP_002566307.1| Di-trans-poly-cis-decaprenylcistransferase [Halorubrum
lacusprofundi ATCC 49239]
gi|222452972|gb|ACM57237.1| Di-trans-poly-cis-decaprenylcistransferase [Halorubrum
lacusprofundi ATCC 49239]
Length = 286
Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Query: 134 IAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKR 193
I + E + A++ + D+++G + +D + ++ L + +PDL+I+TG E R
Sbjct: 185 ITVGLGGKAEFAAAVRELAVDVDAGDLDPESIDPADVSDRLVFPE--EPDLVIKTGAE-R 241
Query: 194 LSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
LSDF +WQ Y+E F W DF + + A+ + R RRFG
Sbjct: 242 LSDFAIWQSVYAELYFTDVNWRDFRKRDYLRAVLDFQDRQRRFGR 286
>gi|126179730|ref|YP_001047695.1| di-trans-poly-cis-decaprenylcistransferase [Methanoculleus
marisnigri JR1]
gi|125862524|gb|ABN57713.1| Di-trans-poly-cis-decaprenylcistransferase [Methanoculleus
marisnigri JR1]
Length = 196
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 50/231 (21%), Positives = 90/231 (38%), Gaps = 49/231 (21%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+ P+HI ++ G + + G ++GIK+ + +
Sbjct: 15 QTLPEHICFMITG-------QDMLDAPG------NLYRAAQWCRDLGIKSAMFHISTPD- 60
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
+ L++ ++R + + L +
Sbjct: 61 ---------------PARLERCLP-------RIREVASIAHLTLHYRDEKE------VGG 92
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
G+++ +A S R+EI+ ++ + +D V VD L+ YL + +PDL+I+
Sbjct: 93 EGMDVTVAIGKSGREEIAGCVRRMAED----GVDPELVDEDLLESYLTFNY--EPDLVIK 146
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
TGG+ L+DFL+WQ YSE F+ W + F AL + R RRFG
Sbjct: 147 TGGDH-LTDFLIWQSVYSELFFLDVNWALLRKVDFLRALRDFQSRARRFGR 196
>gi|149239562|ref|XP_001525657.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451150|gb|EDK45406.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 194
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 54/151 (35%), Positives = 80/151 (52%), Gaps = 5/151 (3%)
Query: 85 FLKKGFYSLKKNN-IKVRVIGNRLSLDDDILCVLKEAEDQTRLN-TGLNLFIAFNYSSRD 142
L + S K N + +++IGNR + +DIL L ED T+ N + L + F+Y++RD
Sbjct: 1 MLSEYDDSYAKYNKVAIKIIGNREYIPEDILKDLVAIEDSTKNNVSKKVLNVCFSYTARD 60
Query: 143 EISRAIKNIFQDIESGSVCS-HDVDSSLIAKYLDTSD-VPDPDLIIRTGGEKRLSDFLLW 200
E++ AIK+I Q G + ++ S I D VP D++IRT G RLSDFLLW
Sbjct: 61 EMTHAIKSIMQKRIDGKIQHRDEIGISTIESNFYFDDNVPPLDILIRTSGHTRLSDFLLW 120
Query: 201 QVAYSEFV-FIPEYWPDFSRELFFHALNQYN 230
Q + S + F WPDF L +++
Sbjct: 121 QCSTSCTIEFPETLWPDFGFVSMISVLFKWS 151
>gi|302523390|ref|ZP_07275732.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. SPB78]
gi|302432285|gb|EFL04101.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. SPB78]
Length = 102
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 35/80 (43%), Positives = 49/80 (61%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A+ + P H+ +MDGNGRWA R LPR AGHR +I+ AA GI+ L+++A
Sbjct: 22 AATRTGRGPRHVACVMDGNGRWAERRSLPRTAGHRAAETTVIDIIEAARSAGIEWLSLYA 81
Query: 63 FSINNWRRPVSEISELVKLI 82
FS NW RP +E+ L+ L+
Sbjct: 82 FSTENWSRPSAEVGYLMDLV 101
>gi|325067376|ref|ZP_08126049.1| undecaprenyl pyrophosphate synthetase [Actinomyces oris K20]
Length = 106
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 53/92 (57%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ A + ++ P H+G+I+DGN RWA + G GH++G + E + A ++G++ +T+
Sbjct: 15 LAARIDPATVPHHVGVILDGNRRWAKSMGFGAAQGHKRGADKIEEFLGWAEQMGVQVVTL 74
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYS 92
+ S +N R +E+S L+ +I + + +
Sbjct: 75 WLLSTDNLSRDPAELSPLLDIIAHAVDELAET 106
>gi|290890489|ref|ZP_06553564.1| hypothetical protein AWRIB429_0954 [Oenococcus oeni AWRIB429]
gi|290479885|gb|EFD88534.1| hypothetical protein AWRIB429_0954 [Oenococcus oeni AWRIB429]
Length = 90
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 31/63 (49%), Positives = 40/63 (63%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P+H+ IIMDGNGRWA + R GH+ G++ I AA +G+K LT+FAFS NW
Sbjct: 19 LPEHVAIIMDGNGRWAKRQHKSRIFGHKAGMQNVKTIALAANNLGVKVLTLFAFSTENWG 78
Query: 70 RPV 72
RP
Sbjct: 79 RPQ 81
>gi|62320372|dbj|BAD94770.1| dehydrodolichyl diphosphate - like protein [Arabidopsis thaliana]
Length = 146
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 35/63 (55%), Positives = 41/63 (65%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ IIMDGNGRWA RGL GHR G+E EIV + GI+ LT+FAFS +NW
Sbjct: 77 MPKHVAIIMDGNGRWAKNRGLQPWDGHRAGVEALKEIVELCGKWGIQVLTVFAFSTDNWI 136
Query: 70 RPV 72
RP
Sbjct: 137 RPR 139
>gi|219850795|ref|YP_002465227.1| Di-trans-poly-cis-decaprenylcistransferase [Methanosphaerula
palustris E1-9c]
gi|219545054|gb|ACL15504.1| Di-trans-poly-cis-decaprenylcistransferase [Methanosphaerula
palustris E1-9c]
Length = 196
Score = 101 bits (252), Expect = 9e-20, Method: Composition-based stats.
Identities = 49/209 (23%), Positives = 82/209 (39%), Gaps = 36/209 (17%)
Query: 30 LPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKG 89
+ R+ + + V + E+GIK + + + S + L+ I+
Sbjct: 24 MVDEKDLREAPDKLYDCVTWSVEMGIKGVIFHISTKD-----PSSMDPLLPAIRRISSIA 78
Query: 90 FYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIK 149
+L + + G+ + +A S R+EI+ I+
Sbjct: 79 ALTLHCG------------------------VHEEQSGKGIAVTVAVGKSGREEITACIR 114
Query: 150 NIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVF 209
+ ++ + VD S+ +YL PDL+I+TGG+ L+DFL+WQ YSE F
Sbjct: 115 AMAEEH----IAPEAVDESVFERYLTFHYT--PDLMIKTGGDH-LTDFLIWQSVYSELFF 167
Query: 210 IPEYWPDFSRELFFHALNQYNLRDRRFGG 238
W + F AL Y R RRFG
Sbjct: 168 SDVNWKFLRKVDFLRALRDYQSRVRRFGA 196
>gi|1196916|gb|AAA88567.1| unknown protein [Streptomyces fradiae]
Length = 125
Score = 101 bits (252), Expect = 9e-20, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLP-RCAGHRKGIEVFNEIVAAAAEVGIKNLT 59
+ + P HIG+IMDGN RWA G+ GHR G E +++ GIK++T
Sbjct: 15 LRRQTAAGPLPKHIGLIMDGNRRWARQMGMANPSIGHRYGAEHVESVLSWCETAGIKHVT 74
Query: 60 IFAFSINNWRRPVS-EISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSL 109
+F S N +R E+S L+++I+ + +VR+ G +L
Sbjct: 75 VFVCSTENLQRRGDTEVSFLMQVIEQVVAVHLAR-PDARWQVRIAGTLDAL 124
>gi|302819584|ref|XP_002991462.1| hypothetical protein SELMODRAFT_429770 [Selaginella moellendorffii]
gi|300140855|gb|EFJ07574.1| hypothetical protein SELMODRAFT_429770 [Selaginella moellendorffii]
Length = 160
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 70/128 (54%), Gaps = 5/128 (3%)
Query: 111 DDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLI 170
+ + EA + T+ + L +A Y +++ +A ++E G V ++D++ +
Sbjct: 34 QALQAKISEAHEMTQDSKDLKFILAITYGGWEDVLQA-CRRASEVEQGVVKANDINQCYL 92
Query: 171 AKYLDTSDV----PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHAL 226
K + +++ DPDL+I T E+RLS++L+ ++Y+E VF + PDF+ E + AL
Sbjct: 93 WKKMLLTELDGEVSDPDLLICTSREQRLSNYLVNNLSYTELVFTKKLQPDFNEEDYVKAL 152
Query: 227 NQYNLRDR 234
++ R+R
Sbjct: 153 VEFQERNR 160
>gi|284161380|ref|YP_003400003.1| Di-trans-poly-cis-decaprenylcistransferase [Archaeoglobus profundus
DSM 5631]
gi|284011377|gb|ADB57330.1| Di-trans-poly-cis-decaprenylcistransferase [Archaeoglobus profundus
DSM 5631]
Length = 181
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 53/238 (22%), Positives = 82/238 (34%), Gaps = 76/238 (31%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ +M P HI I+ D N L R E V + G++ LT+
Sbjct: 20 LERELMKGRMPKHIMIVADEN-------FLNR----------LQEFVRWCKKFGVEELTV 62
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ K+
Sbjct: 63 ---------------------------------------------------CVRRGEKKV 71
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
E T L G+ + YS +DEI A++ + + ++ G + + DVD ++ ++L
Sbjct: 72 E--TSLLNGVKVNYVIGYSGKDEIVDAVRELARLVDKGVLKAEDVDEKVVERFLKIRSS- 128
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PDLII G E + +FL+WQ YSE F F F L Y R+RR+G
Sbjct: 129 -PDLIINVGDE--IPEFLIWQSIYSELYFADI--SQFRYVDFLRCLRDYQRRERRYGR 181
>gi|300122760|emb|CBK23324.2| unnamed protein product [Blastocystis hominis]
Length = 132
Score = 99.2 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGN RWA R L GHR+G EVF E + ++G++ T++AFS NW R E+ +
Sbjct: 1 MDGNRRWARTRNLEVVEGHRRGSEVFRESIKWCIDLGVQEYTVYAFSCENWNRSNKEVED 60
Query: 78 LVKLIKSFLKKGFYSLKKNN------IKVRVIGNR 106
L+ L ++ K S+KK+ ++R IG
Sbjct: 61 LMTLFNLYMGKVIESMKKDKDSIYNACQLRFIGRH 95
>gi|289580904|ref|YP_003479370.1| undecaprenyl diphosphate synthase [Natrialba magadii ATCC 43099]
gi|289530457|gb|ADD04808.1| undecaprenyl diphosphate synthase [Natrialba magadii ATCC 43099]
Length = 201
Score = 99.2 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 54/231 (23%), Positives = 92/231 (39%), Gaps = 46/231 (19%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
++ P+HI +++ R R E E A E + +T++
Sbjct: 17 AALPEHIALVI-----------TERDLLERGAYETLIEFFDWAFEYA-ERVTVY------ 58
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
+S L L++ +++ V V G D
Sbjct: 59 -------VSVLDAAAVPALRRELETIEAPR-DVAVRGPDDRDPADAP------------- 97
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+ I + E + A++ + + +E+G++ D+D + +L +PDL+I+
Sbjct: 98 ----IQIGIGLGGKHEFTSAVRTLAEGVEAGALEPDDIDDDRVEDHLVFP--SEPDLVIK 151
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
TG E RLSDF++WQ YSE F W DF + F A+ +Y R RRFG
Sbjct: 152 TGAE-RLSDFMIWQSVYSELYFTDVNWRDFRKRDFLRAVREYCNRSRRFGR 201
>gi|154151604|ref|YP_001405222.1| di-trans-poly-cis-decaprenylcistransferase [Candidatus
Methanoregula boonei 6A8]
gi|154000156|gb|ABS56579.1| Di-trans-poly-cis-decaprenylcistransferase [Methanoregula boonei
6A8]
Length = 213
Score = 99.2 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 58/111 (52%), Gaps = 7/111 (6%)
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
TGL + +A S R+EI+ I+ + Q+ V ++D ++ L DPD++++
Sbjct: 110 TGLGVVVAIGKSGREEITDCIRRLAQE----GVQPTEIDEKMLESCLTFRY--DPDIVVK 163
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
TGG+ L+DFL+WQ YSE F W F R F L Y R RRFG
Sbjct: 164 TGGDH-LTDFLIWQSVYSELFFSDVNWKYFRRVDFLRVLRDYQARIRRFGK 213
>gi|288931400|ref|YP_003435460.1| Di-trans-poly-cis-decaprenylcistransferase [Ferroglobus placidus
DSM 10642]
gi|288893648|gb|ADC65185.1| Di-trans-poly-cis-decaprenylcistransferase [Ferroglobus placidus
DSM 10642]
Length = 198
Score = 99.2 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 49/239 (20%), Positives = 91/239 (38%), Gaps = 54/239 (22%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
+ S+ + P + ++ D A R+ E F + V + ++N+ I
Sbjct: 13 LEKSLRKENLPKSVMVVTD-------------FASLRRNFEKFLQFVDWCRKFSVENVVI 59
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
S++N ++ KL + + KN +K
Sbjct: 60 CVDSMDN-----DFVNNFSKL-----EAEVELIGKNGVK--------------------- 88
Query: 121 EDQTRLNTGL-NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV 179
+ GL +F+ + ++EI A+K I + + + + + +I + L
Sbjct: 89 ----KFGKGLPKVFVNVGITGKEEILLAVKEILKKKDLSEIDLNSI-EKMIEENLRFKIQ 143
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PDLII+ + + +FL+WQ+ YSE F+ W F F L Y R+RR+G
Sbjct: 144 --PDLIIK--ADDSVPEFLIWQIVYSELYFLDADWESFRYIDFLRCLRDYQRRERRYGR 198
>gi|241574068|ref|XP_002403242.1| cis-prenyltransferase, putative [Ixodes scapularis]
gi|215500205|gb|EEC09699.1| cis-prenyltransferase, putative [Ixodes scapularis]
Length = 145
Score = 99.2 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 42/123 (34%), Positives = 58/123 (47%), Gaps = 4/123 (3%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
+ P + +I DGN R+A A+G GH +G+ E AA GI+ L F S+NN
Sbjct: 22 AETPHTVAVIPDGNRRYARAKGRSIHEGHNEGLSQL-EKATAAPSFGIRRLVTFLLSVNN 80
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKN---NIKVRVIGNRLSLDDDILCVLKEAEDQT 124
+ R E S L LI S L+ S + +VR +G+ L DI +AE T
Sbjct: 81 FNRTEEEKSHLYALISSTLRNICKSCMRYRERGQRVRCVGDLEMLPRDIQRHAADAELST 140
Query: 125 RLN 127
R N
Sbjct: 141 RHN 143
>gi|124484953|ref|YP_001029569.1| ATP-dependent carboligase [Methanocorpusculum labreanum Z]
gi|124362494|gb|ABN06302.1| Di-trans-poly-cis-decaprenylcistransferase [Methanocorpusculum
labreanum Z]
Length = 197
Score = 98.9 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 41/118 (34%), Positives = 62/118 (52%), Gaps = 8/118 (6%)
Query: 121 EDQTRLNTGL-NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV 179
E T + TG+ + IA + R+EI+ AI I ++ V +++ +I K+L
Sbjct: 86 EHDTIIGTGIPEILIALGKTGREEITDAIIKIAKE----GVEPNEITEDMIEKHLIFHV- 140
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+PD +I+TGG L+DFL+WQ YSE F W F + + AL Y R RR+G
Sbjct: 141 -NPDFVIKTGGNH-LTDFLIWQSVYSELFFTDINWGGFRKVDYLRALRDYQSRGRRYG 196
>gi|169806090|ref|XP_001827790.1| dehydrodolichyl diphosphate synthetase [Enterocytozoon bieneusi
H348]
gi|161779076|gb|EDQ31102.1| dehydrodolichyl diphosphate synthetase [Enterocytozoon bieneusi
H348]
Length = 282
Score = 98.5 bits (244), Expect = 7e-19, Method: Composition-based stats.
Identities = 52/221 (23%), Positives = 91/221 (41%), Gaps = 34/221 (15%)
Query: 14 IGIIMDGNGRWAAARGLPRCAGH-RKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPV 72
I I DGN RWA + + GIE +I+ + G+++++ + FSI N++R
Sbjct: 80 IVFICDGNRRWATKNNIDNNQTKIQYGIEKIEQIIEFSYLHGLRSVSFYIFSIRNFQRDS 139
Query: 73 SEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDIL--CVLKEAEDQTRLNTGL 130
+EI + K I + ++ ++++ G+ +D + +L+ E N
Sbjct: 140 AEIMAIKKFITNG------KIQNYPFQLKLYGDFSYFEDATIIEKLLEIEEKSDSRNNSF 193
Query: 131 NLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGG 190
+ I +Y+S + + + DL+IRT G
Sbjct: 194 IVNIFISYNSTN-----------------CDKDKTNKRQFFND-------NVDLVIRTSG 229
Query: 191 EKRLSDFLLWQVAYSEFV-FIPEYWPDFSRELFFHALNQYN 230
EKRLSDF++ QVA V F+ WP+ + L Y
Sbjct: 230 EKRLSDFMIRQVASGCGVNFVNCLWPELTLSHITFMLLLYK 270
>gi|22213621|gb|AAM92879.1| cis-prenyltransferase 12 [Hevea brasiliensis]
Length = 183
Score = 98.5 bits (244), Expect = 8e-19, Method: Composition-based stats.
Identities = 40/174 (22%), Positives = 65/174 (37%), Gaps = 24/174 (13%)
Query: 89 GFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAI 148
+ +I VR +GN L + + + T N+ L IA Y+S DEI A+
Sbjct: 7 EESIINAYDICVRFVGNLKLLSEPVKTAADKIMRATANNSKCVLLIAVCYTSTDEIVHAV 66
Query: 149 KNIFQDIESGSVCSHDVDS---------------------SLIAKYLDTSDVPDPDLIIR 187
+ + + + +++ L+ +T P PD++IR
Sbjct: 67 EESSELNSNEVCNNQELEEANATGSGTVIQIENMESYSGIKLVDLEKNTYINPYPDVLIR 126
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241
T GE RLS++LLWQ WP+ A+ R + L K
Sbjct: 127 TSGETRLSNYLLWQTTNCILYSPHALWPEIGLRHVVWAVI---NCQRHYSYLEK 177
>gi|88602079|ref|YP_502257.1| di-trans-poly-cis-decaprenylcistransferase [Methanospirillum
hungatei JF-1]
gi|88187541|gb|ABD40538.1| Di-trans-poly-cis-decaprenylcistransferase [Methanospirillum
hungatei JF-1]
Length = 208
Score = 97.7 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 42/111 (37%), Positives = 59/111 (53%), Gaps = 7/111 (6%)
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
TG+++ IA S R+EIS AI+++ +V DV + ++ KYL S PD +I+
Sbjct: 105 TGISVTIAIGKSGREEISDAIQSMA----DNNVAPEDVTTDVLEKYLTFSHT--PDCVIK 158
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
TGG L DFL+WQ YSE F+ W + A Y R+RRFG
Sbjct: 159 TGGAH-LVDFLIWQSVYSELFFLDLNWEKIRKIDLIRAFRDYQSRNRRFGA 208
>gi|168188135|ref|ZP_02622770.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum
C str. Eklund]
gi|169294031|gb|EDS76164.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium botulinum
C str. Eklund]
Length = 81
Score = 97.7 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 41/64 (64%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ S+ P+HI IIMDGNGRWA R LPR GH+ G+E EIV +++ +K LT++
Sbjct: 14 IISIDMDKIPEHIAIIMDGNGRWAKKRKLPRTVGHKAGVETIREIVKECSKLNVKILTLY 73
Query: 62 AFSI 65
AF
Sbjct: 74 AFQQ 77
>gi|300122759|emb|CBK23323.2| unnamed protein product [Blastocystis hominis]
Length = 97
Score = 96.9 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 148 IKNIFQDIESGSVCSHDVDSSLI----AKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVA 203
++ +++G + A L T + P D++IRTGGE R+S+FLLWQ+A
Sbjct: 4 VEQRVLQVKNGGKSEEEESVEDFMRDVADNLSTGNSP-VDVMIRTGGEYRISNFLLWQLA 62
Query: 204 YSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
Y+E + E+WPDF+ E AL + R RRFG
Sbjct: 63 YAELYIVDEFWPDFTFEKLKEALKSVSKRSRRFGK 97
>gi|317471592|ref|ZP_07930936.1| di-trans,poly-cis-decaprenylcistransferase [Anaerostipes sp.
3_2_56FAA]
gi|316900907|gb|EFV22877.1| di-trans,poly-cis-decaprenylcistransferase [Anaerostipes sp.
3_2_56FAA]
Length = 55
Score = 96.5 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 30/55 (54%), Positives = 42/55 (76%)
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+IRT GE+RLS+F+LWQ+AY+EF F WPDF+++ A+ YN R+RRFGG+
Sbjct: 1 MIRTSGEQRLSNFMLWQLAYTEFYFTDVLWPDFNKKELKKAVEYYNGRERRFGGI 55
>gi|206994195|emb|CAR79339.1| dehydrodolichyl diphosphate synthase [Oncorhynchus mykiss]
Length = 154
Score = 95.8 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 34/71 (47%), Positives = 45/71 (63%)
Query: 164 DVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFF 223
DV +L+ L +S+ P+PDL+IRT GE RLSDFLLWQ ++S VF WP++S
Sbjct: 1 DVSEALLGHCLYSSNSPNPDLLIRTSGEVRLSDFLLWQTSHSCLVFQSVLWPEYSFWNLC 60
Query: 224 HALNQYNLRDR 234
A+ QY L R
Sbjct: 61 DAILQYQLNHR 71
>gi|322781687|gb|EFZ10269.1| hypothetical protein SINV_11806 [Solenopsis invicta]
Length = 79
Score = 94.6 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 41/76 (53%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGN R+A R + + GH KG + E + ++GIK +T++AFSI N+ R E+
Sbjct: 1 MDGNRRYAQKRNMTKKEGHLKGFDKMIETLNWCMDLGIKEITVYAFSIGNFNRSQEELDG 60
Query: 78 LVKLIKSFLKKGFYSL 93
L+ L + ++
Sbjct: 61 LMDLSRQKFNNLLKNI 76
>gi|119194363|ref|XP_001247785.1| hypothetical protein CIMG_01556 [Coccidioides immitis RS]
Length = 287
Score = 94.2 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 161 CSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSR 219
+ + + ++ T+D P DL+IRT G +RLSDF+LWQ ++ +F+ WP F
Sbjct: 170 SPETISTQTLDDHMLTADSPPLDLLIRTSGVERLSDFMLWQCHEDTDIIFLDTLWPSFGL 229
Query: 220 ELFFHALNQYNLRDRRFGG 238
F L ++ R R+ G
Sbjct: 230 WDFLPVLWEWQWRVRKQGR 248
Score = 49.6 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 39/78 (50%)
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFN 137
+ K+ S L + L + VRV+G R + D+L + A + T N L I F
Sbjct: 1 MAKVKLSQLSQHGDLLDRYGASVRVLGRRELVKADVLEAIDRAVELTSRNGDAILNICFP 60
Query: 138 YSSRDEISRAIKNIFQDI 155
Y+SRDEI+ AI+N D
Sbjct: 61 YTSRDEITSAIRNTVIDY 78
>gi|327400914|ref|YP_004341753.1| Di-trans-poly-cis-decaprenylcistransferase [Archaeoglobus veneficus
SNP6]
gi|327316422|gb|AEA47038.1| Di-trans-poly-cis-decaprenylcistransferase [Archaeoglobus veneficus
SNP6]
Length = 195
Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 50/201 (24%), Positives = 75/201 (37%), Gaps = 44/201 (21%)
Query: 40 IEVFNEIVAAAAEVGIKNLTI--FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNN 97
+ F E V + GI+ +TI F+ R E + KG ++ N
Sbjct: 37 ADSFTEFVKWCEKFGIEEITICVHDFTPE-LERLAEEFG-----CRLIHSKGVLDRQRGN 90
Query: 98 IKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIES 157
+++ VI R EI A++ + + +E
Sbjct: 91 VRLNVI--------------------------------AGLGGRAEIVEAVRKLAELVEK 118
Query: 158 GSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDF 217
G + +VD LI +L PDLI+R G + DFL+WQ YSE F+ W F
Sbjct: 119 GELEPEEVDEELIEAFLRIK--SPPDLIVRAGA--LIPDFLIWQSIYSEMHFLDMDWKSF 174
Query: 218 SRELFFHALNQYNLRDRRFGG 238
F L Y R+RR+G
Sbjct: 175 RYIDFLRCLRDYQRRERRYGR 195
>gi|20270243|ref|NP_612468.1| nogo-B receptor precursor [Homo sapiens]
gi|74762651|sp|Q96E22|NGBR_HUMAN RecName: Full=Nogo-B receptor; Short=NgBR; AltName: Full=Nuclear
undecaprenyl pyrophosphate synthase 1 homolog; Flags:
Precursor
gi|15278225|gb|AAH13026.1| Nuclear undecaprenyl pyrophosphate synthase 1 homolog (S.
cerevisiae) [Homo sapiens]
gi|39645747|gb|AAH63794.1| Nuclear undecaprenyl pyrophosphate synthase 1 homolog (S.
cerevisiae) [Homo sapiens]
gi|44890420|gb|AAH66910.1| Nuclear undecaprenyl pyrophosphate synthase 1 homolog (S.
cerevisiae) [Homo sapiens]
gi|55665703|emb|CAH71370.1| nuclear undecaprenyl pyrophosphate synthase 1 homolog (S.
cerevisiae) [Homo sapiens]
gi|56208161|emb|CAI19895.1| nuclear undecaprenyl pyrophosphate synthase 1 homolog (S.
cerevisiae) [Homo sapiens]
gi|82571486|gb|AAI10326.1| Nuclear undecaprenyl pyrophosphate synthase 1 homolog (S.
cerevisiae) [Homo sapiens]
gi|119568586|gb|EAW48201.1| hCG1782986, isoform CRA_a [Homo sapiens]
gi|187956225|gb|AAI50655.1| Nuclear undecaprenyl pyrophosphate synthase 1 homolog (S.
cerevisiae) [Homo sapiens]
gi|187956505|gb|AAI50656.1| Nuclear undecaprenyl pyrophosphate synthase 1 homolog (S.
cerevisiae) [Homo sapiens]
Length = 293
Score = 92.7 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 53/231 (22%), Positives = 86/231 (37%), Gaps = 38/231 (16%)
Query: 23 RW-AAARGLPRCAGHR----------KGIEVFNEIVAAAAEVGIKNLTIFAFS---INNW 68
RW A R L + H +V VGI ++++ N
Sbjct: 86 RWRADGRSLEKLPVHMGLVITEVEQEPSFSDIASLVVWCMAVGISYISVYDHQGIFKRNN 145
Query: 69 RRPVSEI-SELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
R + EI + +L+ K +N K DD +L N
Sbjct: 146 SRLMDEILKQQQELLGLDCSKYSPEFANSNDK----------DDQVL------------N 183
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L + + + +I RA ++ Q + D+D +A L ++ PDPDL+++
Sbjct: 184 CHLAVKVLSPEDGKADIVRAAQDFCQLVAQKQKRPTDLDVDTLASLLSSNGCPDPDLVLK 243
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
G FL W + +E V +P + + S E FF AL QY ++R G
Sbjct: 244 FGPVDSTLGFLPWHIRLTEIVSLPSHL-NISYEDFFSALRQYAACEQRLGK 293
>gi|148673133|gb|EDL05080.1| DNA segment, Chr 10, ERATO Doi 438, expressed [Mus musculus]
Length = 242
Score = 92.7 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 51/231 (22%), Positives = 83/231 (35%), Gaps = 38/231 (16%)
Query: 23 RW-AAARGLPRCAGHR----------KGIEVFNEIVAAAAEVGIKNLTIFAFS---INNW 68
RW A R L + H +V VGI ++++ N
Sbjct: 35 RWRADVRSLQKLPVHMGLLVTEEVQEPSFSDIASLVVWCMAVGISYISVYDHQGIFKRNN 94
Query: 69 RRPVSEI-SELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
R + EI + +L+ K +N D D + N
Sbjct: 95 SRLMDEILKQQQELLGQDCSKYSAEFANSN------------DKDDQDL----------N 132
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+ + + +I RA ++ Q + D+D L+ L + PDPDL+++
Sbjct: 133 CPSAVKVLSPEDGKADIVRAAQDFCQLVAQQQRKPTDLDVDLLGSLLSSHGFPDPDLVLK 192
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
G FL WQ+ +E V +P + + S E FF AL QY ++R G
Sbjct: 193 FGPVDSTLGFLPWQIRLTEIVSLPSHL-NISYEDFFSALRQYAACEQRLGK 242
>gi|193784995|dbj|BAG54148.1| unnamed protein product [Homo sapiens]
Length = 293
Score = 92.3 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 53/231 (22%), Positives = 86/231 (37%), Gaps = 38/231 (16%)
Query: 23 RW-AAARGLPRCAGHR----------KGIEVFNEIVAAAAEVGIKNLTIFAFS---INNW 68
RW A R L + H +V VGI ++++ N
Sbjct: 86 RWRADGRSLEKLPVHMGLVITEVEQEPSFSDIASLVVWCMAVGISYISVYDHQGIFKRNN 145
Query: 69 RRPVSEI-SELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
R + EI + +L+ K +N K DD +L N
Sbjct: 146 SRLMDEILKQQQELLGLDCSKYSPEFANSNDK----------DDQVL------------N 183
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L + + + +I RA ++ Q + D+D +A L ++ PDPDL+++
Sbjct: 184 CHLAVKVLSPEDGKADIVRAAQDFCQLVAQKQKRPTDLDVDTLASLLSSNGCPDPDLVLK 243
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
G FL W + +E V +P + + S E FF AL QY ++R G
Sbjct: 244 FGPVDSTLGFLPWHIRLTETVSLPSHL-NISYEDFFSALRQYAACEQRLGK 293
>gi|310118105|ref|XP_003120351.1| PREDICTED: nogo-B receptor-like [Homo sapiens]
gi|119579713|gb|EAW59309.1| chromosome 6 open reading frame 68 [Homo sapiens]
Length = 323
Score = 92.3 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 52/231 (22%), Positives = 85/231 (36%), Gaps = 38/231 (16%)
Query: 23 RW-AAARGLPRCAGHR----------KGIEVFNEIVAAAAEVGIKNLTIFAFS---INNW 68
RW A R L + H +V VGI ++++ N
Sbjct: 116 RWRADGRSLEKLPVHMGLVITEVEQEPSFSDIASLVVWCMAVGISYISVYDHQGIFKRNN 175
Query: 69 RRPVSEI-SELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
R + EI + +L+ K +N K DD +L N
Sbjct: 176 SRLMDEILKQQQELLGLDCSKYSPEFANSNDK----------DDQVL------------N 213
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L + + + +I RA ++ Q + D+D + L ++ PDPDL+++
Sbjct: 214 CHLAVKVLSPEDGKADIVRAAQDFCQLVAQKQKRPTDLDVDTLGSLLSSNGCPDPDLVLK 273
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
G FL W + +E V +P + + S E FF AL QY ++R G
Sbjct: 274 FGPVDSTLGFLPWHIRLTEIVSLPSHL-NISYEDFFSALRQYAACEQRLGK 323
>gi|56752989|gb|AAW24706.1| unknown [Schistosoma japonicum]
Length = 172
Score = 92.3 bits (228), Expect = 6e-17, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Query: 136 FNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLS 195
Y+SR++I+ A++ + ++ G + D+ ++K L T DL+IRT GE RLS
Sbjct: 1 MAYNSRNDITNAMETVRLGVKEGKIIPSDITREPLSKCLYTRLSKPLDLLIRTSGEIRLS 60
Query: 196 DFLLWQVAY--SEFVFIPEYWPDFSRELFFHALNQYN 230
DFL WQ + + + FI YWP+FS F ++ Y
Sbjct: 61 DFLTWQASENGTIYKFIGNYWPEFSWWDFLSSIFHYQ 97
>gi|332213125|ref|XP_003255669.1| PREDICTED: nogo-B receptor-like [Nomascus leucogenys]
Length = 293
Score = 91.9 bits (227), Expect = 7e-17, Method: Composition-based stats.
Identities = 52/234 (22%), Positives = 83/234 (35%), Gaps = 44/234 (18%)
Query: 23 RW-AAARGLPRCAGHR----------KGIEVFNEIVAAAAEVGIKNLTIFAFS---INNW 68
RW A R L + H +V VGI ++++ N
Sbjct: 86 RWRADGRSLEKLPVHMGLVITEVEQEPSFSDIASLVVWCMAVGISYISVYDHQGIFKRNN 145
Query: 69 RRPVSEI----SELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
R + EI EL+ L S F S + +V
Sbjct: 146 SRLMDEILKQQQELLGLDCSKYSPEFPSSNDKDDQVL----------------------- 182
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
N L + + + +I RA ++ Q + D+D + L ++ PDPDL
Sbjct: 183 --NCHLAVKVLSPEDGKADIVRAAQDFCQLVAQKQKRPTDLDVDTLGSLLSSNGCPDPDL 240
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+++ G FL W + +E V +P + + S E FF AL QY ++R G
Sbjct: 241 VLKFGPVDSTLGFLPWHIRLTEIVSLPSHL-NISYEDFFSALRQYAACEQRLGK 293
>gi|112180385|gb|AAH18372.1| Nus1 protein [Mus musculus]
Length = 193
Score = 91.9 bits (227), Expect = 7e-17, Method: Composition-based stats.
Identities = 45/200 (22%), Positives = 76/200 (38%), Gaps = 27/200 (13%)
Query: 43 FNEIVAAAAEVGIKNLTIFAFS---INNWRRPVSEI-SELVKLIKSFLKKGFYSLKKNNI 98
+V VGI ++++ N R + EI + +L+ K +N
Sbjct: 17 IASLVVWCMAVGISYISVYDHQGIFKRNNSRLMDEILKQQQELLGQDCSKYSAEFANSN- 75
Query: 99 KVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESG 158
D D + N + + + +I RA ++ Q +
Sbjct: 76 -----------DKDDQDL----------NCPSAVKVLSPEDGKADIVRAAQDFCQLVAQQ 114
Query: 159 SVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS 218
D+D L+ L + PDPDL+++ G FL WQ+ +E V +P + + S
Sbjct: 115 QRKPTDLDVDLLGSLLSSHGFPDPDLVLKFGPVDSTLGFLPWQIRLTEIVSLPSHL-NIS 173
Query: 219 RELFFHALNQYNLRDRRFGG 238
E FF AL QY ++R G
Sbjct: 174 YEDFFSALRQYAACEQRLGK 193
>gi|55627276|ref|XP_518713.1| PREDICTED: nogo-B receptor-like [Pan troglodytes]
Length = 293
Score = 91.9 bits (227), Expect = 7e-17, Method: Composition-based stats.
Identities = 50/231 (21%), Positives = 82/231 (35%), Gaps = 38/231 (16%)
Query: 23 RW-AAARGLPRCAGHR----------KGIEVFNEIVAAAAEVGIKNLTIFAFS---INNW 68
RW A R L + H +V VGI ++++ N
Sbjct: 86 RWRADGRSLEKLPVHMGLVITEVEQEPSFSDIASLVVWCMAVGISYISVYDHQGIFKRNN 145
Query: 69 RRPVSEI-SELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
R + EI + +L+ K +N K D N
Sbjct: 146 SRLMDEILKQQQELLGLDCSKYSPEFANSNDK----------------------DDQVSN 183
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L + + + +I RA ++ Q + D+D + L ++ PDPDL+++
Sbjct: 184 CHLAVKVLSPEDGKADIVRAAQDFCQLVAQKQKRPTDLDVDTLGSLLSSNGCPDPDLVLK 243
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
G FL W + +E V +P + + S E FF AL QY ++R G
Sbjct: 244 FGPVDSTLGFLPWHIRLTEIVSLPSHL-NISYEDFFSALRQYAACEQRLGK 293
>gi|119568587|gb|EAW48202.1| hCG1782986, isoform CRA_b [Homo sapiens]
Length = 145
Score = 91.9 bits (227), Expect = 7e-17, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N L + + + +I RA ++ Q + D+D +A L ++ PDPDL++
Sbjct: 35 NCHLAVKVLSPEDGKADIVRAAQDFCQLVAQKQKRPTDLDVDTLASLLSSNGCPDPDLVL 94
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+ G FL W + +E V +P + + S E FF AL QY ++R G
Sbjct: 95 KFGPVDSTLGFLPWHIRLTEIVSLPSHL-NISYEDFFSALRQYAACEQRLGK 145
>gi|332023688|gb|EGI63912.1| Dehydrodolichyl diphosphate synthase [Acromyrmex echinatior]
Length = 108
Score = 91.5 bits (226), Expect = 8e-17, Method: Composition-based stats.
Identities = 37/106 (34%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 48 AAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIG 104
+ +GI +T++AFSI N++R E+ L+ L++ K LK + I +RV G
Sbjct: 1 KWSMNLGIAEVTVYAFSIENFKRNKEEVDNLIDLMRQKFKDLLENKKKLKDDGICIRVFG 60
Query: 105 NRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKN 150
N L +DI ++ E TR N + + A Y+SRDEI+ AIK+
Sbjct: 61 NLSLLPEDICKLIAEVMIVTRENNRIFINFAVAYTSRDEITHAIKD 106
>gi|302565570|ref|NP_001181421.1| nogo-B receptor [Macaca mulatta]
Length = 293
Score = 91.5 bits (226), Expect = 8e-17, Method: Composition-based stats.
Identities = 52/231 (22%), Positives = 86/231 (37%), Gaps = 38/231 (16%)
Query: 23 RW-AAARGLPRCAGHR----------KGIEVFNEIVAAAAEVGIKNLTIFAFS---INNW 68
RW A R L + H +V VGI ++++ N
Sbjct: 86 RWRADGRSLEKLPVHMGLVITEVEQEPSFSDIASLVVWCMAVGISYISVYDHQGIFKRNN 145
Query: 69 RRPVSEI-SELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
R + EI + +L+ K +N K DD +L N
Sbjct: 146 SRLMDEILKQQQELLGLDCSKYSPEFANSNDK----------DDQVL------------N 183
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L + + + +I RA ++ Q + D+D ++ L ++ PDPDL+++
Sbjct: 184 CHLAVKVLSPEDGKADIVRAAQDFCQLVAQKQKRPTDLDVDMLGSLLSSNGCPDPDLVLK 243
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
G FL W + +E V +P + + S E FF AL QY ++R G
Sbjct: 244 FGPVDSTLGFLPWHIRLTEIVSLPSHL-NISYEDFFSALRQYAACEQRLGK 293
>gi|21226116|ref|NP_632038.1| undecaprenyl pyrophosphate synthetase [Methanosarcina mazei Go1]
gi|20904338|gb|AAM29710.1| Undecaprenyl pyrophosphate synthetase [Methanosarcina mazei Go1]
Length = 123
Score = 91.5 bits (226), Expect = 9e-17, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 51/132 (38%), Gaps = 16/132 (12%)
Query: 107 LSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVD 166
+++L K + + + NY +++ A N + +
Sbjct: 8 DIFPEELLEYTKRTKV---GKGKIKINFLINYGWYWDLTYAYDNSPDGKKMIENIAS--- 61
Query: 167 SSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHAL 226
+++P DL+IR GG RLS L Q YS+ + E WPDF E F AL
Sbjct: 62 ----------AEIPRVDLLIRWGGRCRLSGMLPVQTVYSDIYVVDEMWPDFKPEHLFKAL 111
Query: 227 NQYNLRDRRFGG 238
Y +D GG
Sbjct: 112 EFYQNQDITLGG 123
>gi|327261654|ref|XP_003215644.1| PREDICTED: nogo-B receptor-like [Anolis carolinensis]
Length = 291
Score = 91.2 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 49/232 (21%), Positives = 86/232 (37%), Gaps = 37/232 (15%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
P H+G++ A + +V VGI ++++ +
Sbjct: 96 QKLPGHVGLV---------------VAEEEQSYADVAGLVVWCMAVGISYVSVY--DHDG 138
Query: 68 -WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
++R S KL+ LK+ L + + + E L
Sbjct: 139 IFKRNNS------KLMDEILKQQQELLNLDC------------SKYPVKFANQDETDQVL 180
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
L + + + +I RA + + D+D +++ L T+ PDPDLI+
Sbjct: 181 KCQSTLNVLSSEDGKTDIVRAAQKFCHLVAQKQKKCTDLDMNVLENLLSTNGFPDPDLIL 240
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+ G + FL WQ+ +E V +P + + S E FF AL Y D+R G
Sbjct: 241 KFGPVDSVLGFLPWQIRLTEIVSLPSH-VNVSYEEFFSALCHYADCDQRVGK 291
>gi|118088626|ref|XP_419766.2| PREDICTED: hypothetical protein [Gallus gallus]
gi|326915999|ref|XP_003204299.1| PREDICTED: nogo-B receptor-like [Meleagris gallopavo]
Length = 177
Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 43/199 (21%), Positives = 81/199 (40%), Gaps = 25/199 (12%)
Query: 43 FNEIVAAAAEVGIKNLTIFAFSINN--WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKV 100
+V VGI ++++ +N ++R S +L+ LK+ L
Sbjct: 1 MASLVVWCMAVGISYVSVY---DHNGIFKRNNS------RLMDEILKQEQELL------- 44
Query: 101 RVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSV 160
+ + + LN L + + +I +A +N Q +
Sbjct: 45 ----GLDC-SKYTVEFANQDKADQVLNCQSTLKVLSPEDGKADIVKAAQNFCQLVAQQQR 99
Query: 161 CSHDVDSSLIAKYLD-TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSR 219
D+D +++ L TS PDPDL+++ G FL W + +E + +P + + S
Sbjct: 100 TYTDLDVNVLDNLLSSTSGFPDPDLVLKFGPVDSTLGFLPWHIRLTEIISLPSH-QNISY 158
Query: 220 ELFFHALNQYNLRDRRFGG 238
E FF AL++Y ++R+G
Sbjct: 159 EDFFSALHRYAACEQRWGK 177
>gi|114692525|ref|XP_001141832.1| PREDICTED: similar to Chromosome 6 open reading frame 68 [Pan
troglodytes]
gi|332864110|ref|XP_003318219.1| PREDICTED: nogo-B receptor [Pan troglodytes]
Length = 308
Score = 90.0 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 45/227 (19%), Positives = 83/227 (36%), Gaps = 15/227 (6%)
Query: 23 RW-AAARGLPRCAGHR----------KGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
RW A R L + H +V VGI ++++ +
Sbjct: 86 RWRADGRSLEKLPVHMGLVITEVEREPSFSDIASLVVWCMAVGISYISVYDHQEYSPEFA 145
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
S + + K + + K ++ + + K+ + N L
Sbjct: 146 NSNDKDDQGIFKRNNSRLMDEILKQQQELLGLDCSKYSPEFANSNDKDDQV---SNCHLA 202
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+ + + +I RA ++ Q + D+D + L ++ PDPDL+++ G
Sbjct: 203 VKVLSLEDGKADIVRAAQDFCQLVAQKQKRPTDLDVDTLGSLLSSNGCPDPDLVLKFGPV 262
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
FL W + +E V +P + + S E FF AL QY ++R G
Sbjct: 263 DSTLGFLPWHIRLTEIVSLPSHL-NISYEDFFSALRQYAACEQRLGK 308
>gi|311244042|ref|XP_001928107.2| PREDICTED: LOW QUALITY PROTEIN: nogo-B receptor [Sus scrofa]
Length = 381
Score = 90.0 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 52/231 (22%), Positives = 86/231 (37%), Gaps = 38/231 (16%)
Query: 23 RW-AAARGLPRCAGHR----------KGIEVFNEIVAAAAEVGIKNLTIFAFS---INNW 68
RW A R L + H +V VGI ++++ N
Sbjct: 174 RWRADCRSLEKLPVHMGLVITEEEQEPSFSDIASLVVWCMAVGISYISVYDHQGIFKRNN 233
Query: 69 RRPVSEI-SELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
R + EI + +L+ K +N K DD +L N
Sbjct: 234 SRLMDEILKQQQELLGLDCSKYSPEFSNSNDK----------DDQVL------------N 271
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+ + + +I RA ++ Q + S D+D ++ L ++ PDPDL+++
Sbjct: 272 CQSAVKVLSPEDGKADIVRAAQDFCQLVAQQQKKSTDLDVDMLDSLLSSNGFPDPDLVLK 331
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
G FL W + +E V +P + + S E FF AL QY ++R G
Sbjct: 332 FGPVDSTLGFLPWHIRLTEIVSLPSHL-NISYEDFFSALRQYAACEQRLGK 381
>gi|296199107|ref|XP_002747063.1| PREDICTED: nogo-B receptor-like [Callithrix jacchus]
Length = 159
Score = 90.0 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N L + + + +I RA ++ Q + D+D ++ L ++ PDPDL++
Sbjct: 49 NCHLAVKVLSAEDGKADIVRAAQDFCQLVAQKQKRPTDLDVDMLGSLLSSNGCPDPDLVL 108
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+ G FL W + +E V +P + + S E FF AL QY ++R G
Sbjct: 109 KFGPVDSTLGFLPWHIRLTEIVSLPSHL-NISYEDFFSALRQYAACEQRLGK 159
>gi|213029203|ref|ZP_03343650.1| undecaprenyl pyrophosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. 404ty]
Length = 73
Score = 89.6 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 6 MSSSPP----DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+S + P H+ IIMDGNGRWA +G R GH+ G + V+ AA GI LT++
Sbjct: 8 VSENLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIDALTLY 67
Query: 62 AFS 64
AF
Sbjct: 68 AFR 70
>gi|301783741|ref|XP_002927286.1| PREDICTED: LOW QUALITY PROTEIN: nogo-B receptor-like [Ailuropoda
melanoleuca]
Length = 325
Score = 89.6 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 51/231 (22%), Positives = 86/231 (37%), Gaps = 38/231 (16%)
Query: 23 RW-AAARGLPRCAGHR----------KGIEVFNEIVAAAAEVGIKNLTIFAFS---INNW 68
RW A R L + H +V VGI ++++ N
Sbjct: 118 RWRADGRSLEKLPVHMGLVVTEEEQEHSFSDIASLVVWCMAVGISYISVYDHQGIFKRNN 177
Query: 69 RRPVSEI-SELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
R + EI + +L+ K +N K DD +L N
Sbjct: 178 SRLMDEILKQQQELLGLDCSKYSPEFANSNDK----------DDQVL------------N 215
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+ + + +I RA ++ Q + S D+D + L ++ PDPDL+++
Sbjct: 216 CHSAVKVLSPEDGKADIVRAAQDFCQLVAQQQKRSTDLDVDMFNSLLSSAGFPDPDLVLK 275
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
G FL W + +E + +P + + S E FF AL+QY ++R G
Sbjct: 276 FGPVDSTLGFLPWHIRLTEIISLPSHL-NISYEDFFSALHQYAACEQRLGK 325
>gi|297695479|ref|XP_002824967.1| PREDICTED: nogo-B receptor-like [Pongo abelii]
Length = 293
Score = 89.6 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 50/230 (21%), Positives = 81/230 (35%), Gaps = 36/230 (15%)
Query: 23 RW-AAARGLPRCAGHR----------KGIEVFNEIVAAAAEVGIKNLTIFAFS---INNW 68
RW A R L + H +V VGI ++++ N
Sbjct: 86 RWRADGRSLEKLPVHMGLVITQVEQEPSFSDIASLVVWCMAVGISYISVYDHQGIFKRNN 145
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
R EI LK+ L + + + D LN
Sbjct: 146 SRLTDEI----------LKQQQELLGLD---------CSKYSPEFANSSDK--DDQVLNC 184
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
L + + + +I RA ++ Q + D+D + L ++ PDPDL+++
Sbjct: 185 HLAVKVLSPEDGKADILRAAQDFCQLVAQKQKRPTDLDVDTLGSLLSSNGCPDPDLVLKF 244
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
G FL W + +E V +P + + S E FF AL QY ++R G
Sbjct: 245 GPVDSTLGFLPWHIRLTEIVSLPSHL-NISYEDFFSALRQYAACEQRLGK 293
>gi|297678993|ref|XP_002817336.1| PREDICTED: LOW QUALITY PROTEIN: nogo-B receptor-like [Pongo abelii]
Length = 478
Score = 89.6 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 52/235 (22%), Positives = 85/235 (36%), Gaps = 40/235 (17%)
Query: 23 RW-AAARGLPRCAGHR----------KGIEVFNEIVAAAAEVGIKNLTIFAFS---INNW 68
RW A R L + H +V VGI ++++ N
Sbjct: 259 RWRADGRSLEKLPVHMGLVITEVEQEPSFSDIASLVVWCMAVGISYISVYDHQGIFKRNN 318
Query: 69 RRPVSEI-SELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
R + EI + +L+ K +N K DD +L N
Sbjct: 319 SRLMDEILKQQQELLGLDCSKYSPEFANSNDK----------DDQVL------------N 356
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L + + + +I RA ++ Q + D+D + L ++ PDPDL+++
Sbjct: 357 CHLAVKVLSPEDGKADIVRAAQDFCQLVAQKQKRPTDLDVDTLGSLLSSNGCPDPDLVLK 416
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWP---DFSRELFFHALNQYNLRDRRFGGL 239
G FL W + +E V + P + S E FF AL QY ++R G +
Sbjct: 417 FGPVDSTLGFLPWHIRLTEIVXLFASIPTTLNISYEDFFSALRQYAACEQRLGKV 471
>gi|74198604|dbj|BAE39779.1| unnamed protein product [Mus musculus]
Length = 297
Score = 89.2 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 51/231 (22%), Positives = 83/231 (35%), Gaps = 38/231 (16%)
Query: 23 RW-AAARGLPRCAGHR----------KGIEVFNEIVAAAAEVGIKNLTIFAFS---INNW 68
RW A R L + H +V VGI ++++ N
Sbjct: 90 RWRADVRSLQKLPVHMGLLVTEEVQEPSFSDIASLVVWCMAVGISYISVYDHQGIFKRNN 149
Query: 69 RRPVSEI-SELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
R + EI + +L+ K +N D D + N
Sbjct: 150 SRLMDEILKQQQELLGQDCSKYSAEFANSN------------DKDDQDL----------N 187
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+ + + +I RA ++ Q + D+D L+ L + PDPDL+++
Sbjct: 188 CPSAVKVLSPEDGKADIVRAAQDFCQLVAQQQRKPTDLDVDLLGSLLSSHGFPDPDLVLK 247
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
G FL WQ+ +E V +P + + S E FF AL QY ++R G
Sbjct: 248 FGPVDSTLGFLPWQIRLTEIVSLPSHL-NISYEDFFSALRQYAACEQRLGK 297
>gi|13384840|ref|NP_084526.1| nogo-B receptor precursor [Mus musculus]
gi|81880242|sp|Q99LJ8|NGBR_MOUSE RecName: Full=Nogo-B receptor; Short=NgBR; AltName: Full=Nuclear
undecaprenyl pyrophosphate synthase 1 homolog; Flags:
Precursor
gi|13096852|gb|AAH03223.1| Nuclear undecaprenyl pyrophosphate synthase 1 homolog (S.
cerevisiae) [Mus musculus]
Length = 297
Score = 89.2 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 51/231 (22%), Positives = 83/231 (35%), Gaps = 38/231 (16%)
Query: 23 RW-AAARGLPRCAGHR----------KGIEVFNEIVAAAAEVGIKNLTIFAFS---INNW 68
RW A R L + H +V VGI ++++ N
Sbjct: 90 RWRADVRSLQKLPVHMGLLVTEEVQEPSFSDIASLVVWCMAVGISYISVYDHQGIFKRNN 149
Query: 69 RRPVSEI-SELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
R + EI + +L+ K +N D D + N
Sbjct: 150 SRLMDEILKQQQELLGQDCSKYSAEFANSN------------DKDDQDL----------N 187
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+ + + +I RA ++ Q + D+D L+ L + PDPDL+++
Sbjct: 188 CPSAVKVLSPEDGKADIVRAAQDFCQLVAQQQRKPTDLDVDLLGSLLSSHGFPDPDLVLK 247
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
G FL WQ+ +E V +P + + S E FF AL QY ++R G
Sbjct: 248 FGPVDSTLGFLPWQIRLTEIVSLPSHL-NISYEDFFSALRQYAACEQRLGK 297
>gi|74204379|dbj|BAE39943.1| unnamed protein product [Mus musculus]
Length = 297
Score = 89.2 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 44/200 (22%), Positives = 76/200 (38%), Gaps = 27/200 (13%)
Query: 43 FNEIVAAAAEVGIKNLTIFAFS---INNWRRPVSEI-SELVKLIKSFLKKGFYSLKKNNI 98
+V VGI ++++ N R + EI + +L+ K +N
Sbjct: 121 IASLVVWCMAVGISYISVYDHQGIFKRNNSRLMDEILKQQQELLGQDCSKYSAEFANSN- 179
Query: 99 KVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESG 158
D D + N + + + +I RA ++ + +
Sbjct: 180 -----------DKDDQDL----------NCPSAVKVLSPEDGKADIVRAAQDFCKLVAQQ 218
Query: 159 SVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS 218
D+D L+ L + PDPDL+++ G FL WQ+ +E V +P + + S
Sbjct: 219 QRKPTDLDVDLLGSLLSSHGFPDPDLVLKFGPVDSTLGFLPWQIRLTEIVSLPSHL-NIS 277
Query: 219 RELFFHALNQYNLRDRRFGG 238
E FF AL QY ++R G
Sbjct: 278 YEDFFSALRQYAACEQRLGK 297
>gi|197127300|gb|ACH43798.1| hypothetical protein [Taeniopygia guttata]
Length = 282
Score = 88.1 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 43/199 (21%), Positives = 81/199 (40%), Gaps = 25/199 (12%)
Query: 43 FNEIVAAAAEVGIKNLTIFAFSINN--WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKV 100
+V VGI ++++ +N ++R + +L+ LK+ L + K
Sbjct: 106 MASLVVWCMAVGISYVSVY---DHNGIFKRNNA------RLMDEILKQQQELLGLDCSKY 156
Query: 101 RVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSV 160
V + LN L + + +I +A +N Q +
Sbjct: 157 SV------------EFANHDKTGQVLNCQSALKVLSPEDGKADIVKAAQNFCQLVAQQQR 204
Query: 161 CSHDVDSSLIAKYLD-TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSR 219
D+D +++ L T+ PDPDL+++ G FL W + +E + +P + + S
Sbjct: 205 THSDLDVNMLDNLLSSTNGFPDPDLVLKFGPVDSTLGFLPWHIRLTEIISLPSHL-NISY 263
Query: 220 ELFFHALNQYNLRDRRFGG 238
E FF AL+ Y ++R+G
Sbjct: 264 EDFFSALHHYAACEQRWGK 282
>gi|242001680|ref|XP_002435483.1| cis-prenyltransferase, putative [Ixodes scapularis]
gi|215498819|gb|EEC08313.1| cis-prenyltransferase, putative [Ixodes scapularis]
Length = 218
Score = 88.1 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 68/156 (43%), Gaps = 4/156 (2%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + + P + ++ DG+ RWA RG P GH KG + ++ AA +G++ +F
Sbjct: 53 LWLLSFAQLPSSLALVPDGHRRWAKQRGAPLHLGHIKGSSLLEQVQAAVLALGVRESYVF 112
Query: 62 AFSINNWRRPVSE-ISELVKLIKSF--LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
FS+ N+ RP + + + +SF + + +K R G+ ++
Sbjct: 113 TFSVRNFGRPEKQRVDLFNHMKRSFDSICNNWEFYQKKEWSFRTRGDIERFPKELHKRAA 172
Query: 119 EAEDQTRLNT-GLNLFIAFNYSSRDEISRAIKNIFQ 153
+ E T + N++ Y SR +I+R +
Sbjct: 173 KMELLTHQTSAKSNIYSCGPYESRHQITRMAVTLCH 208
>gi|73946289|ref|XP_541219.2| PREDICTED: similar to CG4775-PA [Canis familiaris]
Length = 293
Score = 88.1 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 53/231 (22%), Positives = 86/231 (37%), Gaps = 38/231 (16%)
Query: 23 RW-AAARGLPRCAGHR----------KGIEVFNEIVAAAAEVGIKNLTIFAFS---INNW 68
RW A R L + H +V VGI ++++ N
Sbjct: 86 RWRADGRSLEKLPVHMGLVVTEEEQEPSFSDIASLVVWCMAVGISYISVYDHQGIFKRNN 145
Query: 69 RRPVSEI-SELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
R + EI + +L+ K +N K DD +L N
Sbjct: 146 SRLMDEILKQQQELLGLDCSKYSPEFANSNDK----------DDQVL------------N 183
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+ + + +I RA ++ Q + S D+D ++ L ++ PDPDL+++
Sbjct: 184 CRSAVRVLSPEDGKADIVRAAQDFCQLVAQQQKRSADLDVDMLDSLLSSTGFPDPDLVLK 243
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
G FL W + +E V +P Y + S E FF AL QY ++R G
Sbjct: 244 FGPVDSTLGFLPWHIRLTEIVSLPSYL-NISYEDFFSALRQYAACEQRLGK 293
>gi|194216392|ref|XP_001504211.2| PREDICTED: similar to nuclear undecaprenyl pyrophosphate synthase 1
homolog [Equus caballus]
Length = 428
Score = 87.3 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 52/231 (22%), Positives = 87/231 (37%), Gaps = 38/231 (16%)
Query: 23 RW-AAARGLPRCAGHR----------KGIEVFNEIVAAAAEVGIKNLTIFAFS---INNW 68
RW A R L + H +V VGI ++++ N
Sbjct: 221 RWRADGRALEKLPVHMGLVITEEEQEPSFSDIASLVVWCMAVGISYISVYDHQGIFKRNN 280
Query: 69 RRPVSEI-SELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
R + EI + +L+ K +N K DD +L N
Sbjct: 281 SRLMDEILKQQQELLGLDCSKYSPEFANSNDK----------DDQVL------------N 318
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+ + + +I RA ++ Q + S D+D +++ L ++ PDPDL+++
Sbjct: 319 CQSAVKVLSPEDGKADIVRAAQDFCQLVAQQQKKSTDLDVAMLDSLLSSNGFPDPDLVLK 378
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
G FL W + +E V +P + + S E FF AL QY ++R G
Sbjct: 379 FGPVDSTLGFLPWHIRLTEIVSLPSHL-NISYEDFFSALRQYAACEQRLGK 428
>gi|281202833|gb|EFA77035.1| hypothetical protein PPL_09788 [Polysphondylium pallidum PN500]
Length = 523
Score = 87.3 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 65/117 (55%), Gaps = 3/117 (2%)
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGF---YSLKKNNIKVRVIGNRLSLDDDILCV 116
++AFSI N++RP E++ L++L + + L+K +++R++G+ + + +
Sbjct: 329 VYAFSIENFKRPQHEVNYLMELANQKFGEVISRSHKLQKLGVRIRIVGDISHIPEKTQII 388
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKY 173
L +A T NT L I +Y+S +E+ +++ + + +E + + D+D +L K+
Sbjct: 389 LAKAVKATESNTKALLNICMSYTSHEEMLHSMRTLSKGVEDKVIRTEDIDQNLFEKF 445
>gi|255918181|ref|NP_001157629.1| nuclear undecaprenyl pyrophosphate synthase 1 [Rattus norvegicus]
gi|149038647|gb|EDL92936.1| similar to hypothetical protein D10Ertd438e (predicted), isoform
CRA_a [Rattus norvegicus]
gi|149038648|gb|EDL92937.1| similar to hypothetical protein D10Ertd438e (predicted), isoform
CRA_a [Rattus norvegicus]
Length = 293
Score = 86.5 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 49/231 (21%), Positives = 83/231 (35%), Gaps = 38/231 (16%)
Query: 23 RW-AAARGLPRCAGHR----------KGIEVFNEIVAAAAEVGIKNLTIFAFS---INNW 68
RW A R L + H +V VGI ++++ N
Sbjct: 86 RWRADGRSLQKLPVHMGLVITEEVQEPSFSDIASLVVWCMAVGISYISVYDHQGIFKRNN 145
Query: 69 RRPVSEI-SELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
R + EI + +L+ K +N K DD +L N
Sbjct: 146 SRLMDEILKQQQELLGQDCSKYSAEFANSNDK----------DDQVL------------N 183
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+ + + +I RA ++ Q + ++ L+ L + PDPDL+++
Sbjct: 184 CPSAVKVLSPEDGKADIVRAAQDFCQSVAQQQRRPTELGVELLDSLLSSHGFPDPDLVLK 243
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
G FL WQ+ +E + +P + + S E F AL QY ++R G
Sbjct: 244 FGPVDSTLGFLPWQIRLTEIISLPSH-SNISYEDLFSALRQYAACEQRLGK 293
>gi|126310498|ref|XP_001369297.1| PREDICTED: similar to chromosome 6 open reading frame 68
[Monodelphis domestica]
Length = 300
Score = 86.5 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 38/211 (18%), Positives = 79/211 (37%), Gaps = 19/211 (9%)
Query: 28 RGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLK 87
GL +V VGI ++++ + K
Sbjct: 109 MGLVVTEEEEPSFSDIASLVVWCMAVGISYISVYDHQ---------------GIFKRNNS 153
Query: 88 KGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRA 147
+ + K ++ + + + KE + N ++ + +++I RA
Sbjct: 154 RLMDEILKQQQELLGLDCPKYSPEFVNSNDKEDQVL---NCQSSVKVLSPEDGKEDIVRA 210
Query: 148 IKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEF 207
++ Q + S D+D +++ L + PDPDL+++ G +L W + +E
Sbjct: 211 ARDFCQLVAQQQKKSTDMDVNILGNLLSLNGFPDPDLVLKFGPVDSTLGYLPWHIRLTEI 270
Query: 208 VFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+ +P + + S E FF AL +Y ++R G
Sbjct: 271 ISLPSHL-NISYEDFFSALRRYAACEQRLGK 300
>gi|225388938|ref|ZP_03758662.1| hypothetical protein CLOSTASPAR_02679 [Clostridium asparagiforme
DSM 15981]
gi|225044991|gb|EEG55237.1| hypothetical protein CLOSTASPAR_02679 [Clostridium asparagiforme
DSM 15981]
Length = 132
Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 39/151 (25%), Positives = 62/151 (41%), Gaps = 24/151 (15%)
Query: 90 FYSLKKNNIKVRVIGNRL--SLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRA 147
++ K + V+GN ++L + + + G+ + NYS ++
Sbjct: 4 VEAISKEEASLLVLGNTESPMFPPELLPYTRRHDF---GSGGMKINFLVNYSWEWDL--- 57
Query: 148 IKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEF 207
+ L T DV DLIIR GG +RLS FL Q Y++F
Sbjct: 58 ----------------GFQKGAVGPCLKTEDVSRIDLIIRWGGRRRLSGFLPVQSVYADF 101
Query: 208 VFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+ +YWPDF+ + AL Y+ +D GG
Sbjct: 102 YVVDDYWPDFTPDHITQALEWYSGQDVTLGG 132
>gi|255522288|ref|ZP_05389525.1| undecaprenyl diphosphate synthase [Listeria monocytogenes FSL
J1-175]
Length = 73
Score = 85.8 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
P H+ IIMDGNGRWA R LPR AGH++G++V + A +GI LT+
Sbjct: 22 PIPRHVAIIMDGNGRWAKKRFLPRIAGHKEGMDVVKRVTRYANAIGIDVLTL 73
>gi|241997690|ref|XP_002433494.1| Nogo-B receptor, putative [Ixodes scapularis]
gi|215490917|gb|EEC00558.1| Nogo-B receptor, putative [Ixodes scapularis]
Length = 266
Score = 85.4 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 44/233 (18%), Positives = 94/233 (40%), Gaps = 37/233 (15%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ +++ G +R +V I ++T++
Sbjct: 68 KVPKHVAVVI-G----------ESLVSYRDVAN----LVVWCLFARIPHVTLY------- 105
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN- 127
++ ++K S L K +K + G+ + + KE ++ N
Sbjct: 106 -----DVEGVMKKNWSELYKEVLRSQK-----KHFGSCDTSKVVLYVEGKETTEKNGRNG 155
Query: 128 --TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
+++ +A N R ++ + + Q+++ G + D+ LI K + + D PDPD++
Sbjct: 156 YTHHVHVRLASNEDGRPLFAKFARKLCQEVKEGRLSPSDIVPDLIQKQV-SGDWPDPDIL 214
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+R G + + WQ+ +E + +P + + F AL Y+ R++RFG
Sbjct: 215 LRFGKAHSVFGYQPWQLRLTEIISLPTH-HNLRLSEFLGALRTYDNREQRFGK 266
>gi|197127299|gb|ACH43797.1| hypothetical protein [Taeniopygia guttata]
Length = 282
Score = 85.4 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 43/199 (21%), Positives = 82/199 (41%), Gaps = 25/199 (12%)
Query: 43 FNEIVAAAAEVGIKNLTIFAFSINN--WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKV 100
+V VGI ++++ +N ++R + +L+ LK+ L + K
Sbjct: 106 MASLVVWCMAVGISYVSVY---DHNGIFKRNNA------RLMDEILKQQQELLGLDCSKY 156
Query: 101 RVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSV 160
V + LN L + + + +I +A +N Q +
Sbjct: 157 SV------------EFANHDKTGQVLNCQSALKVLSSEDEKADIVKAAQNFCQLVAQQQR 204
Query: 161 CSHDVDSSLIAKYLD-TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSR 219
D+D +++ L T+ PDPDL+++ G FL W + +E + +P + + S
Sbjct: 205 THSDLDVNMLDNLLSSTNGFPDPDLVLKFGPVDSTLGFLPWHIRLTEIISLPSHL-NISY 263
Query: 220 ELFFHALNQYNLRDRRFGG 238
E FF AL+ Y ++R+G
Sbjct: 264 EDFFSALHHYAACEQRWGK 282
>gi|225388937|ref|ZP_03758661.1| hypothetical protein CLOSTASPAR_02678 [Clostridium asparagiforme
DSM 15981]
gi|225044990|gb|EEG55236.1| hypothetical protein CLOSTASPAR_02678 [Clostridium asparagiforme
DSM 15981]
Length = 117
Score = 85.0 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 36/62 (58%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HIGII DGN RWA G+ + G+R GI + ++GI+ ++ + F+++N
Sbjct: 2 RIPQHIGIIPDGNRRWAVQNGMEKQDGYRHGISPGLSLYRTCRDLGIREMSFYGFTVDNT 61
Query: 69 RR 70
+R
Sbjct: 62 KR 63
>gi|224048245|ref|XP_002190167.1| PREDICTED: nuclear undecaprenyl pyrophosphate synthase 1
[Taeniopygia guttata]
Length = 280
Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 2/113 (1%)
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD-TSDVPDPDLI 185
N L + + +I +A +N Q + D+D +++ L T+ PDPDL+
Sbjct: 169 NCQSALKVLSPEDGKADIVKAAQNFCQLVAQQQRTHSDLDVNMLDNLLSSTNGFPDPDLV 228
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
++ G FL W + +E + +P + + S E FF AL+ Y ++R+G
Sbjct: 229 LKFGPVDSTLGFLPWHIRLTEIISLPSHL-NISYEDFFSALHHYAACEQRWGK 280
>gi|167948136|ref|ZP_02535210.1| Undecaprenyl pyrophosphate synthetase family protein [Endoriftia
persephone 'Hot96_1+Hot96_2']
Length = 89
Score = 83.1 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 27/41 (65%), Positives = 31/41 (75%)
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS 218
D+PDPDL IRTGGE R+S+FLLWQ AYSE F WP+F
Sbjct: 5 DLPDPDLFIRTGGECRVSNFLLWQAAYSELYFTDLLWPEFD 45
>gi|296814904|ref|XP_002847789.1| dehydrodolichyl diphosphate synthetase [Arthroderma otae CBS
113480]
gi|238840814|gb|EEQ30476.1| dehydrodolichyl diphosphate synthetase [Arthroderma otae CBS
113480]
Length = 245
Score = 83.1 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 10/111 (9%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGN R++ +RGL GH G ++ AA VGI+ +T++AFSI ++ RP ++
Sbjct: 1 MDGNRRFSRSRGLTIRNGHLLGAFALENVMGAAHAVGIEAITVYAFSIESFHRPKEQLMR 60
Query: 78 LVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
++ ++ I+VRV+G L+D+I ++ QT +T
Sbjct: 61 FLRSGDIIDRR--------GIRVRVLGRLELLNDNIKEIID--IMQTCGST 101
>gi|149572624|ref|XP_001517963.1| PREDICTED: similar to chromosome 6 open reading frame 68
[Ornithorhynchus anatinus]
Length = 172
Score = 82.7 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
N + + + +I RA ++ Q + S D+D +++ L + PDPDL++
Sbjct: 62 NCQSAVKVLSPEDGKADIVRAARDFCQLVAQQQKRSTDMDVNVLDNLLSSDGFPDPDLVL 121
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+ G +L W + +E V +P + D S E F AL+ Y ++R G
Sbjct: 122 KFGPVDSTLGYLPWHIRLTEIVSLPSHL-DVSYEDFLSALHCYAACEQRLGK 172
>gi|213512010|ref|NP_001133241.1| Nogo-B receptor [Salmo salar]
gi|209147404|gb|ACI32888.1| Nogo-B receptor precursor [Salmo salar]
Length = 281
Score = 82.3 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 46/200 (23%), Positives = 86/200 (43%), Gaps = 23/200 (11%)
Query: 43 FNEIVAAAAEVGIKNLTIFAFSINN---WRRPVSEISELVKLIKSFLKKGFYSLKKNNIK 99
+V VGI ++++ +N +RR S +L+ LK+ L K
Sbjct: 101 IANLVVWCMAVGISYVSVY----DNYGVFRRNNS------RLMDEILKQQQELLDLEGSK 150
Query: 100 VRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGS 159
L + L + +DQ L+ L + + I +A + + + +E
Sbjct: 151 --------HLSVEFLNNGTDKQDQQVLSCQSVLKVLSPDDGKLRIVQAAQQLCRAVEQRE 202
Query: 160 VCSHDVDSSLIAKYL-DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS 218
S D++ +++ L ++ PDPDL+++ G + FL W + +EF+ +P + D S
Sbjct: 203 KTSKDINVTVLDSLLRESKSTPDPDLVLKFGPVESTLGFLPWHIRLTEFISLPSH-VDVS 261
Query: 219 RELFFHALNQYNLRDRRFGG 238
E F AL +Y ++R G
Sbjct: 262 YEDLFSALQRYASCEQRLGK 281
>gi|169835793|ref|ZP_02868981.1| undecaprenyl diphosphate synthase [candidate division TM7
single-cell isolate TM7a]
Length = 99
Score = 81.9 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 49/92 (53%)
Query: 53 VGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDD 112
G++ ++ + FS NW+R E+ L+ L+ L ++ NI+++++G+R +D
Sbjct: 1 AGVEYVSAYVFSTENWQRTKGEVKHLMGLVLRLLTDDLPEFERYNIRLKILGSRDGVDAK 60
Query: 113 ILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEI 144
IL + AE +T N L + FNY + ++
Sbjct: 61 ILSAIDNAEAKTANNHSGTLALCFNYGGQQKL 92
>gi|156386671|ref|XP_001634035.1| predicted protein [Nematostella vectensis]
gi|156221113|gb|EDO41972.1| predicted protein [Nematostella vectensis]
Length = 251
Score = 81.5 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 37/199 (18%), Positives = 74/199 (37%), Gaps = 23/199 (11%)
Query: 43 FNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEI--SELVKLIKSFLKKGFYSLKKNNIKV 100
++V +GIK ++++ I + KL + K K +
Sbjct: 73 VAKLVVWCMAMGIKYISVY---------DHKGILKGDTAKLSSEIIYKQKEVFAKEAKRY 123
Query: 101 RVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSV 160
+ L + D T T + + + + +I A + ++
Sbjct: 124 TFV----------LRNSRTKFDHTLAPTQVCITVLSAEDGKQDIVEAAQEFCMSVKQKKY 173
Query: 161 CSHDVDSSLIAKYL-DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSR 219
+D+ L L T+ +PDPDL ++ G + FL WQ+ +EF+ + +
Sbjct: 174 SPKQLDTDLFNDMLKATTGLPDPDLALKFGAVSSVMGFLPWQIRLTEFLTHQTH-HNVKY 232
Query: 220 ELFFHALNQYNLRDRRFGG 238
F +L +Y+ ++RFG
Sbjct: 233 SAFLQSLQKYSRCEKRFGK 251
>gi|50539772|ref|NP_001002356.1| nogo-B receptor precursor [Danio rerio]
gi|82183326|sp|Q6DHR8|NGBR_DANRE RecName: Full=Nogo-B receptor; Short=NgBR; AltName: Full=Nuclear
undecaprenyl pyrophosphate synthase 1 homolog; Flags:
Precursor
gi|49900370|gb|AAH75899.1| Zgc:92136 [Danio rerio]
gi|169146317|emb|CAQ13476.1| novel protein (zgc:92136) [Danio rerio]
Length = 274
Score = 81.5 bits (200), Expect = 9e-14, Method: Composition-based stats.
Identities = 39/200 (19%), Positives = 87/200 (43%), Gaps = 24/200 (12%)
Query: 43 FNEIVAAAAEVGIKNLTIFAFSINN---WRRPVSEISELVKLIKSFLKKGFYSLKKNNIK 99
+V VGI ++++ +N ++R S +L++ LK+ L
Sbjct: 95 IANLVVWCMAVGISYVSVY----DNQGVFKRNNS------RLMEEILKQQQELLG----- 139
Query: 100 VRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGS 159
+G+ + + + E Q + + + R I +A + + + +E
Sbjct: 140 ---MGSSKYSVEILKNGTNKQEHQVLSCQSM-VKVLSPDDGRLSIVQAAQQLCRAVEQKE 195
Query: 160 VCSHDVDSSLIAKYL-DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS 218
S D++ S++ L ++ ++PDPDL+++ G + FL W + +E + +P + D S
Sbjct: 196 KTSKDINVSVLDSLLKESKNIPDPDLVLKFGTVQSTLGFLPWHIRLTEIISMPSHI-DAS 254
Query: 219 RELFFHALNQYNLRDRRFGG 238
+ + AL ++ ++R G
Sbjct: 255 YDDLYDALQRFAGCEQRLGK 274
>gi|70939189|ref|XP_740170.1| dehydrodolichyl diphosphate synthetase [Plasmodium chabaudi
chabaudi]
gi|56517698|emb|CAH76718.1| dehydrodolichyl diphosphate synthetase, putative [Plasmodium
chabaudi chabaudi]
Length = 163
Score = 81.5 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 57/114 (50%), Gaps = 1/114 (0%)
Query: 117 LKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT 176
K + T N+ + + + + ++ + + S + + L T
Sbjct: 32 KKRNINYTYANSNNSDKTNIQINPKTKNTQTSQVRCNCGKVCSFDKNQIKILNYHNKLLT 91
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVA-YSEFVFIPEYWPDFSRELFFHALNQY 229
+D P PD++IRT GE+RLSDF+L+QV+ ++E FI +YWP F+ F + + Y
Sbjct: 92 ADFPPPDILIRTSGEQRLSDFMLYQVSEFTEVYFIDDYWPIFNFLKFIYVILHY 145
>gi|213402121|ref|XP_002171833.1| di-trans,poly-cis-decaprenylcistransferase [Schizosaccharomyces
japonicus yFS275]
gi|211999880|gb|EEB05540.1| di-trans,poly-cis-decaprenylcistransferase [Schizosaccharomyces
japonicus yFS275]
Length = 264
Score = 81.1 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 51/232 (21%), Positives = 80/232 (34%), Gaps = 33/232 (14%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P HI +I+D G ++ E+ A GI LT++
Sbjct: 60 PKHIAVIVD----------YSEEGGIEALVDSVCELSAWCLCSGIYELTVY--------- 100
Query: 71 PVSEISELVKLIKSFLKKGFYS-----LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
E + +K + L+K S + I V V + E+
Sbjct: 101 ---EKNGYLKEHPTALQKAIESHLPYYFGELRINVNVSSPCS--PEASAASTTESH---S 152
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
T LNL + RD I + + + S V+ LI K L S +P+PDL+
Sbjct: 153 DQTSLNLRLIAREDGRDAIIDLARGLVDLSVKHVITSTQVNMELIDKELSESVIPEPDLL 212
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
I + RL F W + E + + +F AL Y+ + R G
Sbjct: 213 IVFSKKFRLQGFPPWHLRLCEIYYDESL-RGVNYLTYFKALIHYSDAEMRLG 263
>gi|82595921|ref|XP_726048.1| undecaprenyl pyrophosphate synthetase-like-related [Plasmodium
yoelii yoelii str. 17XNL]
gi|23481291|gb|EAA17613.1| undecaprenyl pyrophosphate synthetase-like-related [Plasmodium
yoelii yoelii]
Length = 76
Score = 79.6 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 38/76 (50%)
Query: 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISE 77
MDGN R+A GL GH G + I+ ++ IK L++FAFS+ N+ R EI
Sbjct: 1 MDGNRRFAKQMGLHTSIGHYLGSKNLIHIIELCIQLNIKILSVFAFSLLNYNRSPEEIHI 60
Query: 78 LVKLIKSFLKKGFYSL 93
L L FL Y L
Sbjct: 61 LFYLNLFFLINEEYFL 76
>gi|328790733|ref|XP_001120453.2| PREDICTED: nogo-B receptor-like [Apis mellifera]
Length = 222
Score = 79.6 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 45/236 (19%), Positives = 88/236 (37%), Gaps = 36/236 (15%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
A+ P HI +I+ G A + I+ +GI ++
Sbjct: 23 AASKMKKLPRHI-VIVFG----AKEN---------TIFDCIR-IIRWCYTLGISYISF-- 65
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
F I+ + L+K L K L + + + +
Sbjct: 66 FDISGFLIRNE------NLLKYELAKRQPDLMEY---INWGKSNAGFSQN---------G 107
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
T + + +F+ + + EI K + + + +G++ +++ L+ + L++ +PDP
Sbjct: 108 ITDSKSKMRIFLLSSLDGKKEIVSLTKTLAEAVITGTIKPEEINIELLDEKLNSRKMPDP 167
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DL I G L WQ +EF +P + S + F L +YN ++R+G
Sbjct: 168 DLGIIYGRVCSTYGVLPWQTRITEFYMLPLHI-SLSAKDFICLLEKYNKSEQRYGK 222
>gi|145225329|ref|YP_001136007.1| di-trans-poly-cis-decaprenylcistransferase [Mycobacterium gilvum
PYR-GCK]
gi|145217815|gb|ABP47219.1| di-trans-poly-cis-decaprenylcistransferase [Mycobacterium gilvum
PYR-GCK]
Length = 200
Score = 79.6 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 67/183 (36%), Gaps = 21/183 (11%)
Query: 55 IKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKN-NIKVRVIGNRLSLDDDI 113
I+ ++++ S N RP +E++ + F + + + +R+ G+R L D
Sbjct: 32 IRTVSVYNLSRANLARPAAELAAVYNASIYFFSELIPTHFDPADCTIRLHGDRSLLPLDY 91
Query: 114 LCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKY 173
+ + E + I Y + DE+ R Q + D+
Sbjct: 92 VAAAEALEGAAPRGD-FCINILAAYDAFDEL-RGAHFRAQQQGCDIATAFDI-------- 141
Query: 174 LDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
P DL+IRT E LS FL Q Y+E F+ + + + +
Sbjct: 142 ------PPVDLVIRTTAEPLLSGFLPLQCQYAELTFLATPLNELTATDIDAVIAE----H 191
Query: 234 RRF 236
RRF
Sbjct: 192 RRF 194
>gi|196006097|ref|XP_002112915.1| hypothetical protein TRIADDRAFT_56532 [Trichoplax adhaerens]
gi|190584956|gb|EDV25025.1| hypothetical protein TRIADDRAFT_56532 [Trichoplax adhaerens]
Length = 224
Score = 77.7 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/239 (17%), Positives = 79/239 (33%), Gaps = 38/239 (15%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF-- 61
S P HIG++ + +++ + +GI +T+F
Sbjct: 20 SKRMKQIPAHIGLV---------------VVEDSISCKDIAKVIVWSIGIGIPCVTLFDQ 64
Query: 62 -AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ + E++ L+ S K +N I + I
Sbjct: 65 KGWLKEMRHKINQEVTNYYNLLLSKEKTKMVLSCRNGIALANISIPGYSKP--------- 115
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD-TSDV 179
+ L N R +I A + + D D + + L T
Sbjct: 116 ---------IRLNFLSNSDGRQDIVTAAQKLCSDSNFYHATVTDQEIDRVTSTLHATHGF 166
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PDP+L+I+ G + FL WQ+ +E + +W + LF + + Y+ +RFG
Sbjct: 167 PDPELVIKFGDIDSMLGFLPWQIRLTEITSLLSHW-NLPYSLFLNVIRDYSNCQQRFGK 224
>gi|62859459|ref|NP_001016090.1| nuclear undecaprenyl pyrophosphate synthase 1 homolog [Xenopus
(Silurana) tropicalis]
Length = 218
Score = 76.9 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/235 (17%), Positives = 78/235 (33%), Gaps = 40/235 (17%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS--- 64
P H+ ++M G + +V VGI ++++
Sbjct: 20 GKLPVHMAMLM-G----------EEIQSYTD----LANLVVWCMAVGISYVSVYDHQGIL 64
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
+ R + E+ + K + + N RV +
Sbjct: 65 KQHSSRLMDEVLKQQKELLGHDYSKYPLEHSNGTTDRVDRGLTHMPS------------- 111
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD-VPDPD 183
+ + +I +A +N Q + ++D + + L T+ PDPD
Sbjct: 112 -------FKVLAPEDGKMQIVKAAQNFCQLVAQEQRKPIEMDVNALDSLLRTTQTFPDPD 164
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
LI++ G FL W + SE + +P + + E F+ L+ Y ++R G
Sbjct: 165 LILKFGSVDSTLGFLPWHIRLSEIISLPSH-VNMRYEDFYSVLSCYAACEQRLGK 218
>gi|126540556|emb|CAM46101.1| dehydrodolichyl diphosphate synthase [Mus musculus]
gi|126541188|emb|CAM46078.1| dehydrodolichyl diphosphate synthase [Mus musculus]
Length = 168
Score = 76.5 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/124 (29%), Positives = 53/124 (42%), Gaps = 37/124 (29%)
Query: 86 LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEIS 145
L + L+K+ + +RV+G+ L D+ + A T+
Sbjct: 9 LMEEQEKLQKHGVCIRVLGDLHLLPLDLQEKIAHAIQATKNYN----------------- 51
Query: 146 RAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVA-- 203
+DV SL+ K L ++ P PD++IRT GE RLSDFLLWQ A
Sbjct: 52 -----------------NDVSESLLDKCLYSNHSPHPDILIRTSGEVRLSDFLLWQKARD 94
Query: 204 -YSE 206
Y+E
Sbjct: 95 MYAE 98
>gi|111305738|gb|AAI21527.1| hypothetical protein LOC548844 [Xenopus (Silurana) tropicalis]
Length = 218
Score = 76.1 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 39/235 (16%), Positives = 78/235 (33%), Gaps = 40/235 (17%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS--- 64
P H+ ++M G + +V VGI ++++
Sbjct: 20 GKLPVHMAMLM-G----------EEIQSYTD----LANLVVWCMAVGISYVSVYDHQGIL 64
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
+ R + E+ + + + + N RV +
Sbjct: 65 KQHSSRLMDEVLKQQEELLGHDYSKYPLEHANGTTDRVDRGLTHMPS------------- 111
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD-VPDPD 183
+ + +I +A +N Q + ++D + + L T+ PDPD
Sbjct: 112 -------FKVLAPEDGKMQIVKAAQNFCQLVAQEQRKPIEMDVNALDSLLRTTQTFPDPD 164
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
LI++ G FL W + SE + +P + + E F+ L+ Y ++R G
Sbjct: 165 LILKFGSVDSTLGFLPWHIRLSEIISLPSH-VNMRYEDFYSVLSCYAACEQRLGK 218
>gi|56206241|emb|CAI21493.1| dehydrodolichyl diphosphate synthase [Homo sapiens]
Length = 169
Score = 76.1 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 34/116 (29%)
Query: 86 LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEIS 145
L + L+K+ + +RV+G+ L D+ ++ +A T+
Sbjct: 9 LMEEKEKLQKHGVCIRVLGDLHLLPLDLQELIAQAVQATKNYN----------------- 51
Query: 146 RAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQ 201
+D+ SL+ K L T+ P PD++IRT GE RLSDFLLWQ
Sbjct: 52 -----------------NDISESLLDKCLYTNRSPHPDILIRTSGEVRLSDFLLWQ 90
>gi|312438361|gb|ADQ77432.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus TCH60]
Length = 73
Score = 76.1 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 31/45 (68%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIV 47
+ SS+ P+HI IIMDGNGRWA R +PR GH +G++ +++
Sbjct: 28 EELDSSNIPEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKLL 72
>gi|330918953|ref|XP_003298414.1| hypothetical protein PTT_09135 [Pyrenophora teres f. teres 0-1]
gi|311328387|gb|EFQ93491.1| hypothetical protein PTT_09135 [Pyrenophora teres f. teres 0-1]
Length = 347
Score = 75.7 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 46/237 (19%), Positives = 88/237 (37%), Gaps = 21/237 (8%)
Query: 9 SPPDHIGIIM-----DGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF-- 61
P H+ +I+ DG ++G G + EI A AA GI L+++
Sbjct: 125 KLPRHLSVIVEYQEDDG------SQGTAGLEGL---VNDVCEIAAWAASAGIPLLSVYER 175
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
+ N+ P + S L F + +L ++ + + + + E
Sbjct: 176 TGVLKNYL-PQTHTSIWNTLEAYFGPRRKPTLS---LRAPHLSSYSPPNTPPQTATSDGE 231
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
L + + + RD I + + + + G V ++ LI L+ +
Sbjct: 232 VSKEDRQHLTVLLLSEHDGRDTIVDLTRTLAEMAQKGDVREEQINMDLIDAQLNDHVSSE 291
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PDL+I +L + WQ+ +E +P+ + ++F AL Y + R G
Sbjct: 292 PDLLILFSPTVQLKGYPPWQLRLTEIFHLPDN-KGVNYQVFLRALYNYAKVEMRLGR 347
>gi|119497973|ref|XP_001265744.1| hypothetical protein NFIA_034130 [Neosartorya fischeri NRRL 181]
gi|119413908|gb|EAW23847.1| hypothetical protein NFIA_034130 [Neosartorya fischeri NRRL 181]
Length = 94
Score = 75.7 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 136 FNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLS 195
Y+SRDE++RA+ ++ + + + ++ L T D P DL++R+ G RLS
Sbjct: 1 MAYTSRDEMARAMLRCVEEYPHTA-----ITAQSLSDKLHTGDNPPVDLVVRSSGMYRLS 55
Query: 196 DFLLWQVAY-SEFVFIPEYWPDFSREL-FFHALNQYNLR 232
DFLLWQ ++ WP+F F + Y R
Sbjct: 56 DFLLWQCHEDTQIQIADAMWPEFGAWEPFMRLYDLYQAR 94
>gi|167966576|ref|ZP_02548853.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis H37Ra]
Length = 109
Score = 74.6 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
S P HI ++ DGN RWA + G G+R G E++ E GI+ T++ S
Sbjct: 28 KSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWCHEAGIELATVYLLS 86
>gi|189203665|ref|XP_001938168.1| di-trans,poly-cis-decaprenylcistransferase [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187985267|gb|EDU50755.1| di-trans,poly-cis-decaprenylcistransferase [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 347
Score = 74.2 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 46/237 (19%), Positives = 88/237 (37%), Gaps = 21/237 (8%)
Query: 9 SPPDHIGIIM-----DGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF-- 61
P H+ +I+ DG ++G G + EI A AA GI L+++
Sbjct: 125 KLPRHLSVIVEYQEDDG------SQGTAGLEGL---VNDVCEIAAWAASAGIPLLSVYER 175
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
+ N+ P + S L F + +L ++ + + + + E
Sbjct: 176 TGVLKNYL-PQTHASIWNTLEAYFGPRRKPTLS---LRAPHLSSYSPPNTPPQTATSDGE 231
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
L + + + RD I + + + + G V ++ LI L+ +
Sbjct: 232 VSKEERQHLTVLLLSEHDGRDTIVDLTRTLAEMAQKGDVREEQINMDLIDAQLNDHVSSE 291
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PDL+I +L + WQ+ +E +P+ + ++F AL Y + R G
Sbjct: 292 PDLLILFSPTVQLKGYPPWQLRLTEIFHLPDN-KGVNYQVFLRALYNYAKVEMRLGR 347
>gi|291230748|ref|XP_002735327.1| PREDICTED: nuclear undecaprenyl pyrophosphate synthase 1-like
[Saccoglossus kowalevskii]
Length = 268
Score = 73.4 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/197 (20%), Positives = 80/197 (40%), Gaps = 19/197 (9%)
Query: 43 FNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRV 102
IV VGI ++++ + +++R K+ LKK L + K
Sbjct: 90 VANIVVWCMTVGISYISLYD-TQGDFKRNC------TKINNEILKKQEEVLGNESTKCLF 142
Query: 103 IGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCS 162
+ E ++ + +++ + R +I RA K Q +
Sbjct: 143 ---------HLYRGGIEVHNK-VNDCRIHVNLLSLEDGRQDIVRAAKYFCQQVACKRRKV 192
Query: 163 HDVDSSLIAKYLDTSDV-PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSREL 221
+D++ +++ L +D+ PDPDLII+ G L FL +Q+ SE + + + ++
Sbjct: 193 NDLNPTVLENDLQGNDIFPDPDLIIKFGDVDSLLGFLPYQIRLSEILCSSSH-HNMDYKV 251
Query: 222 FFHALNQYNLRDRRFGG 238
F L +Y +R+G
Sbjct: 252 FISLLYRYAGCAQRYGK 268
>gi|261884429|ref|ZP_06008468.1| undecaprenyl diphosphate synthase [Campylobacter fetus subsp.
venerealis str. Azul-94]
Length = 68
Score = 73.0 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 35/53 (66%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+H+ IIMDGNGRWA RGL R GH+ G V +IV+ + NLT++AFS
Sbjct: 5 NHLAIIMDGNGRWAKKRGLVRTNGHQIGANVVEDIVSYWRRNSLINLTLYAFS 57
>gi|315931168|gb|EFV10141.1| undecaprenyl diphosphate synthase [Campylobacter jejuni subsp.
jejuni 327]
Length = 54
Score = 73.0 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
++R G KRLS+FLLWQ +Y+E F +P ++ F + ++ R+R FG
Sbjct: 1 MLRVGNAKRLSNFLLWQCSYAEIYFSETLFPSLTKREFKRIIKEFRNRERTFGK 54
>gi|207108680|ref|ZP_03242842.1| hypothetical protein HpylH_04134 [Helicobacter pylori
HPKX_438_CA4C1]
Length = 50
Score = 72.7 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
RLS+FLLWQ +Y+E F P WPDF+ + + ++ + R R+FG L
Sbjct: 1 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELK 49
>gi|325119940|emb|CBZ55493.1| GF20994, related [Neospora caninum Liverpool]
Length = 219
Score = 72.7 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 55/114 (48%), Gaps = 11/114 (9%)
Query: 46 IVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFY---SLKKNNIKVRV 102
+ + E+GI+ +T++AF++ N+ R +E++ L+ L + + K+ I++R
Sbjct: 1 MCESCLELGIQFVTVYAFALGNFHRDPAEVTGLLNLAEEKFADKGWIDGFFKRLGIRLRF 60
Query: 103 IGNRLSLDDDILCVLKEAEDQTRL--------NTGLNLFIAFNYSSRDEISRAI 148
+G+ L D + L A +T L + + Y SR EI+RA+
Sbjct: 61 LGDFSYLPDRLRTALATAVQETSEACADPNGLGCRLLVTVCVAYGSRREIARAL 114
>gi|156537017|ref|XP_001608303.1| PREDICTED: similar to ENSANGP00000028832 [Nasonia vitripennis]
Length = 277
Score = 72.7 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 46/238 (19%), Positives = 83/238 (34%), Gaps = 24/238 (10%)
Query: 7 SSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF----- 61
+S P H+ I++ G + +++ A I +T +
Sbjct: 58 ASKIPRHLAILL----------GQEEI-----SVLDLRRLISWCAIAEIPYITFYDHKGI 102
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
+ R I EL L K ++ N K+ + + ++
Sbjct: 103 LQKSQDLIRSK--IDELEPLAKQNVEWSHSFDSTTNNKIVAERQKNKRNSLATNAIQSDA 160
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS-DVP 180
+ L + + +I K + ++ HDV S L+ + L+ VP
Sbjct: 161 TELINIRKSKLQVLSYTDGKGKIIELTKFLAKNNHVNGFEKHDVTSELLDEKLNFGMGVP 220
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DPDL I G FL WQ +EF IP + D S + F + +++ +R+G
Sbjct: 221 DPDLAIVFGKTMCTYGFLPWQTRVTEFFTIPSH-RDISYKDFVDTIIRFSECQQRYGK 277
>gi|315302966|ref|ZP_07873689.1| di-trans,poly-cis-decaprenylcistransferase [Listeria ivanovii FSL
F6-596]
gi|313628665|gb|EFR97075.1| di-trans,poly-cis-decaprenylcistransferase [Listeria ivanovii FSL
F6-596]
Length = 59
Score = 72.7 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 21/38 (55%), Positives = 27/38 (71%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEI 46
P H+ IIMDGNGRWA R LPR AGH++G++V +
Sbjct: 22 PIPRHVAIIMDGNGRWAKKRFLPRIAGHKEGMDVVKRV 59
>gi|260808672|ref|XP_002599131.1| hypothetical protein BRAFLDRAFT_81798 [Branchiostoma floridae]
gi|229284407|gb|EEN55143.1| hypothetical protein BRAFLDRAFT_81798 [Branchiostoma floridae]
Length = 251
Score = 72.7 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/197 (20%), Positives = 82/197 (41%), Gaps = 18/197 (9%)
Query: 43 FNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRV 102
+V A +GI ++++ S +R + S +++K + K +I++ V
Sbjct: 72 LASLVVWCAAMGISYISLYD-SQGILKRNNT--SLWQEIMKQQQELLGEDSNKYSIEL-V 127
Query: 103 IGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCS 162
GNR + T + + + + R ++ +A + Q +E+
Sbjct: 128 TGNRTTT------------QLTGQKYSVEVRLLSSEDGRTDLLQAAQRWCQAVEARRKKV 175
Query: 163 HDVDSSLIAKYLD-TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSREL 221
D++ + + L T PD DL+++ G L FL WQ+ +E + +P + +
Sbjct: 176 GDLEPTALEGLLQATKGAPDVDLVLKFGTVDSLLGFLPWQIRLTEILSLPTH-HSIDYQT 234
Query: 222 FFHALNQYNLRDRRFGG 238
F AL + ++RFG
Sbjct: 235 FLLALQSFGNIEQRFGK 251
>gi|260204316|ref|ZP_05771807.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis K85]
gi|289573731|ref|ZP_06453958.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|289538162|gb|EFD42740.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
Length = 222
Score = 72.3 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 46 IVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGN 105
++ E GI+ T++ S N +R E++ L+++I +++ N+ VR +G+
Sbjct: 1 MLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEE--ICAPANHWSVRTVGD 58
Query: 106 RLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD 164
+ ++ L+ A + T ++ +A Y R EI A++ +F+ S + +
Sbjct: 59 LGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALFEQGNSPTGPPRE 117
>gi|241574066|ref|XP_002403241.1| undecaprenyl pyrophosphate synthetase, putative [Ixodes scapularis]
gi|215500204|gb|EEC09698.1| undecaprenyl pyrophosphate synthetase, putative [Ixodes scapularis]
Length = 163
Score = 71.5 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 42/84 (50%)
Query: 148 IKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEF 207
+ + G + D+ LI +Y D PD D ++RT GE+RLSDFLL Q YS
Sbjct: 2 ALKFCRAVRDGLLEPSDITEDLIDEYNKIEDAPDVDFLLRTSGERRLSDFLLLQSNYSLI 61
Query: 208 VFIPEYWPDFSRELFFHALNQYNL 231
+Y+P+ + + AL ++
Sbjct: 62 QVERKYFPECTPRDVWRALLSFSQ 85
>gi|290563066|gb|ADD38927.1| Nogo-B receptor [Lepeophtheirus salmonis]
Length = 261
Score = 71.5 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 43/235 (18%), Positives = 84/235 (35%), Gaps = 54/235 (22%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
S P H+GI L + ++ +++++ E+GI+ LT++
Sbjct: 77 SKIPHHLGI-----------AFLEKDID----LKEVSKMISWIQELGIQILTLY------ 115
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
+++ +KL +L + ++ L
Sbjct: 116 ------DVNGHIKLNTKYLHHLLD----------------------QGNIAYNSSKSTLK 147
Query: 128 TGLNLFIAFNYSSRDEISRAIK----NIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
+ LNL IA + + I+ S + D+ LI L T +PDPD
Sbjct: 148 SCLNLRIASHLDGKKAIADLANDLKSKTLHSYSSSVIKPEDISEKLIHSLLTTDSLPDPD 207
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
++IR GG + FL W + +E + + + ++Y+ ++RFG
Sbjct: 208 VLIRCGGLESNMGFLPWHIRLAEIFDLYSH-KGLRKADVISIFHKYSRCEKRFGA 261
>gi|241574064|ref|XP_002403240.1| undecaprenyl pyrophosphate synthetase, putative [Ixodes scapularis]
gi|215500203|gb|EEC09697.1| undecaprenyl pyrophosphate synthetase, putative [Ixodes scapularis]
Length = 99
Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 56/99 (56%)
Query: 132 LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE 191
+F A +YSS+ ++SR + ++ G + D+ +SLI +Y++ D P D +RT GE
Sbjct: 1 IFYAASYSSQHQMSRMALTLCHAVKEGLLEPRDITASLIDRYIEIEDGPMIDCYLRTSGE 60
Query: 192 KRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
+RLSDF+ WQ + F+ + +PDF F + Y+
Sbjct: 61 RRLSDFMTWQSERAAIYFLTKNFPDFVLLDMFKMMLHYS 99
>gi|119497971|ref|XP_001265743.1| hypothetical protein NFIA_034120 [Neosartorya fischeri NRRL 181]
gi|119413907|gb|EAW23846.1| hypothetical protein NFIA_034120 [Neosartorya fischeri NRRL 181]
Length = 110
Score = 70.4 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 23/119 (19%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTI 60
++ P H+ I DGN R+A +R G +GIK +T+
Sbjct: 14 LIDIARQGPIPQHVAFIKDGNRRFARSR--------ETGFI-----------IGIKVITL 54
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKE 119
+AFSI N++RP +I ++ L ++ +G S + V ++
Sbjct: 55 YAFSIANFKRPRDQIEAIMAL----FREQIAMYSAPGGFAETVGFFDSGVGPLRDVGRK 109
>gi|218682880|ref|ZP_03530481.1| undecaprenyl pyrophosphate synthase protein [Rhizobium etli CIAT
894]
Length = 48
Score = 70.4 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/43 (62%), Positives = 33/43 (76%)
Query: 201 QVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
Q AYSE +F+PEYWPDFS E+F AL ++ RDRRFGGLS +
Sbjct: 1 QAAYSEPIFLPEYWPDFSPEIFRQALEKFASRDRRFGGLSSQA 43
>gi|11498314|ref|NP_069541.1| hypothetical protein AF0707 [Archaeoglobus fulgidus DSM 4304]
gi|2649909|gb|AAB90534.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
Length = 207
Score = 69.6 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/219 (17%), Positives = 71/219 (32%), Gaps = 61/219 (27%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
P HI ++ E F + + G+ +TI +
Sbjct: 38 QKVPKHIVVV------------------TNSIGEGFLNLAKWCRKFGVDEITICGNTQ-- 77
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
+ K+R+I + + +
Sbjct: 78 ----------------------IDESFFDGFKLRII--------------RNGSVEEKDG 101
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+ I ++ R+EI ++ + + +E G + +VD +L K+L PD+II+
Sbjct: 102 LKPTINI-LTFTGREEIINVVRKVAKMVERGELEVDEVDENLFEKFLTIK--SPPDMIIK 158
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHAL 226
G + + DFL+WQ Y+E F W + F L
Sbjct: 159 AGND--IPDFLIWQGIYAELYFADIDWQNLRYADFLRIL 195
>gi|307183319|gb|EFN70188.1| Nogo-B receptor [Camponotus floridanus]
Length = 250
Score = 68.4 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 38/219 (17%), Positives = 84/219 (38%), Gaps = 26/219 (11%)
Query: 25 AAARGLPRCAGHRKGI--EVFNEIVA---AAAEVGIKNLTIFAFSINNWRRPVSEISELV 79
A + +PR G+ E + V + I ++ F + + +
Sbjct: 53 AKTKKIPRHLVIVLGLCDESVLDCVRIIGWCIALNIPYISFF------------DRNGFL 100
Query: 80 KLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYS 139
K ++ LK+ F + + + I T + +N+ + +
Sbjct: 101 KKNEANLKEEFAKKRPD--LIEHIIWNSHTKPPSQN------GITGSKSKINVLLLSDTD 152
Query: 140 SRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLL 199
++ +I ++++ + + G + D+ LI++ L+ +P+PDL + G L
Sbjct: 153 NKGKIVTLVQSLTRAVSLGKLDPEDITDQLISEKLNMKGLPNPDLALIYGYTCSTHGLLP 212
Query: 200 WQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+EF+ +P Y S E F + L +Y+ +R+G
Sbjct: 213 LHTRTTEFLTLPLYI-SISVEDFIYLLERYSKFVQRYGK 250
>gi|207111315|ref|ZP_03245477.1| putative undecaprenyl pyrophosphate synthase [Helicobacter pylori
HPKX_438_CA4C1]
Length = 44
Score = 68.4 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAA 50
H+ IIMDGNGRWA + R GH+KG++ +I
Sbjct: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWC 44
>gi|238878380|gb|EEQ42018.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 84
Score = 68.4 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 22/47 (46%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVA 48
++ + + P H+ +IMDGN +A LP GH G ++
Sbjct: 37 ISIIKTGPIPKHVAMIMDGNRTYAKKHRLPLKEGHFAGANALVKVCK 83
>gi|56206247|emb|CAI21499.1| dehydrodolichyl diphosphate synthase [Homo sapiens]
Length = 73
Score = 67.7 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAA 49
+ + P HI IMDGN R+A + R GH +G E++A
Sbjct: 20 IKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAELLAF 64
>gi|197099040|ref|NP_001125067.1| dehydrodolichyl diphosphate synthase [Pongo abelii]
gi|55726853|emb|CAH90186.1| hypothetical protein [Pongo abelii]
Length = 67
Score = 67.7 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIV 47
+ + P HI IMDGN R+A + R GH +G E +
Sbjct: 20 IKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETL 62
>gi|291519554|emb|CBK74775.1| Undecaprenyl pyrophosphate synthase [Butyrivibrio fibrisolvens
16/4]
Length = 36
Score = 67.3 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEV 42
+ P+HI II+DGNGRWA ++G+PR GH G +
Sbjct: 2 NVPEHIAIILDGNGRWAKSKGMPRTYGHTVGAKK 35
>gi|260943067|ref|XP_002615832.1| hypothetical protein CLUG_04714 [Clavispora lusitaniae ATCC
42720]
gi|238851122|gb|EEQ40586.1| hypothetical protein CLUG_04714 [Clavispora lusitaniae ATCC
42720]
Length = 83
Score = 66.5 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVF 43
M+ + S P H+G+IMDGN R+A RG+ GH G +
Sbjct: 31 MMDVLSSGPVPGHLGLIMDGNRRFAKKRGVDSKQGHTAGADSL 73
>gi|255728577|ref|XP_002549214.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240133530|gb|EER33086.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 80
Score = 66.1 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVF 43
++ M + P HI +IMDGN +A LP GH G
Sbjct: 36 ISIMKTGPIPKHIAMIMDGNRTYAKNHRLPLKEGHFAGANAL 77
>gi|194670088|ref|XP_604346.4| PREDICTED: chromosome 6 open reading frame 68-like [Bos taurus]
Length = 278
Score = 65.7 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 174 LDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
L ++ PDPDL+++ G FL W + +E + +P + + S E FF AL QY +
Sbjct: 215 LSSNGFPDPDLVLKFGPVDSTLGFLPWHIRLTEIISLPSHL-NISYEDFFSALRQYAACE 273
Query: 234 RRFGG 238
+R G
Sbjct: 274 QRLGK 278
>gi|111305192|gb|AAI20228.1| DHDDS protein [Bos taurus]
Length = 73
Score = 65.3 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEI 46
+ + P HI IMDGN R+A + R GH +G E+
Sbjct: 20 IKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAEV 61
>gi|322781596|gb|EFZ10255.1| hypothetical protein SINV_16122 [Solenopsis invicta]
Length = 127
Score = 64.6 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 16/87 (18%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF 61
+ + + HI I+DGN R+A + + A ++G+ IK +T++
Sbjct: 20 LKIIKNGKVHKHIAFILDGNRRYAKKHKITKKA--QQGV--------------IKEVTVY 63
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKK 88
AFSI+N+ R +I +K+ K+ L+
Sbjct: 64 AFSIHNFNRSKKKIKNHMKIYKNILEN 90
>gi|310793946|gb|EFQ29407.1| Di-trans,poly-cis-decaprenylcistransferase [Glomerella graminicola
M1.001]
Length = 328
Score = 64.6 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 47/234 (20%), Positives = 80/234 (34%), Gaps = 29/234 (12%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFN------EIVAAAAEVGIKNLTIFAFS 64
P H+ +I L R G R G E+ EI I LT++
Sbjct: 118 PKHLSVI------------LKREEGGRHGAELERLVAEAAEIAVWCVCAKIPVLTVY--- 162
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
R L L +S ++K ++ + V DD+L +
Sbjct: 163 ----ERTGLLKHYLPHLQQSIIQKSRSYFGRHQPSLTVAMPHS---DDVLESPAHGDFVR 215
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
L + RD + + + + + G + D+ + LI L +P+PDL
Sbjct: 216 DDPRHLKVLFISAEDGRDSMVDLTRTLTEMSQKGKLHPGDISTDLIDAELSEGIMPEPDL 275
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+I G L + W + +E +P+ ++F ALN + R G
Sbjct: 276 LISFGPYVDLDGYPPWPIRLTEIFCLPDN-QGVGYQVFLRALNNFAKAQFRKGK 328
>gi|169146318|emb|CAQ13477.1| novel protein (zgc:92136) [Danio rerio]
Length = 211
Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/172 (18%), Positives = 74/172 (43%), Gaps = 23/172 (13%)
Query: 43 FNEIVAAAAEVGIKNLTIFAFSINN---WRRPVSEISELVKLIKSFLKKGFYSLKKNNIK 99
+V VGI ++++ +N ++R S +L++ LK+ L
Sbjct: 49 IANLVVWCMAVGISYVSVY----DNQGVFKRNNS------RLMEEILKQQQELLG----- 93
Query: 100 VRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGS 159
+G+ + + + E Q + + + R I +A + + + +E
Sbjct: 94 ---MGSSKYSVEILKNGTNKQEHQVLSCQSM-VKVLSPDDGRLSIVQAAQQLCRAVEQKE 149
Query: 160 VCSHDVDSSLIAKYL-DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFI 210
S D++ S++ L ++ ++PDPDL+++ G + FL W + +E +++
Sbjct: 150 KTSKDINVSVLDSLLKESKNIPDPDLVLKFGTVQSTLGFLPWHIRLTEIMYM 201
>gi|146420408|ref|XP_001486160.1| hypothetical protein PGUG_01831 [Meyerozyma guilliermondii ATCC
6260]
Length = 309
Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 46/235 (19%), Positives = 82/235 (34%), Gaps = 30/235 (12%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEV-FNEIVAAAAEVGIKNLTIFAFSINN 67
P + I+D R G G+ +E+ A G+ +LTI+
Sbjct: 100 KLPRRVAAILD-------LRDDDDENGGVDGLISDISELAAWLVLAGVPHLTIY------ 146
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR-- 125
E +VKL S L + N+++ G + A +
Sbjct: 147 ------EHDGVVKLHISELVRYV----SKNLRLYF-GTDSIPTFAVRVPHTNATAYSHPA 195
Query: 126 --LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
N L + + + I K + + + + D+ L+ + L P+PD
Sbjct: 196 LGTNVDLTISVLSRVDGKPTILELTKTMSELAANKELSIKDISVELVDEELVELVGPEPD 255
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L+I G L +F W + +E + P D + +F AL QY+ + + G
Sbjct: 256 LLICFGPSLDLQNFPPWHIRLTEIYWEPGN-TDVNYAVFIAALQQYSQCEMKVGK 309
>gi|190345789|gb|EDK37733.2| hypothetical protein PGUG_01831 [Meyerozyma guilliermondii ATCC
6260]
Length = 309
Score = 64.2 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/235 (19%), Positives = 82/235 (34%), Gaps = 30/235 (12%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEV-FNEIVAAAAEVGIKNLTIFAFSINN 67
P + I+D R G G+ +E+ A + G+ +LTI+
Sbjct: 100 KLPRRVAAILD-------LRDDDDENGGVDGLISDISELAAWSVSAGVPHLTIY------ 146
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR-- 125
E +VK S L + N+++ G + A +
Sbjct: 147 ------EHDGVVKSHISELVRYV----SKNLRLYF-GTDSIPTFAVRVPHTNATAYSHPA 195
Query: 126 --LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
N L + + + I K + + + + D+ L+ + L P+PD
Sbjct: 196 LGTNVDLTISVLSRVDGKPTILELTKTMSELAANKELSIKDISVELVDEELVELVGPEPD 255
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L+I G L +F W + +E + P D + +F AL QY+ + + G
Sbjct: 256 LLICFGPSLDLQNFPPWHIRLTEIYWEPGN-TDVNYAVFIAALQQYSQCEMKVGK 309
>gi|302822396|ref|XP_002992856.1| hypothetical protein SELMODRAFT_136096 [Selaginella moellendorffii]
gi|300139304|gb|EFJ06047.1| hypothetical protein SELMODRAFT_136096 [Selaginella moellendorffii]
Length = 53
Score = 63.8 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
GE+RLS+F++ +++ VF + WPDF E + AL ++ +RRFG
Sbjct: 1 SGEQRLSNFIVNNFIFTKLVFDRKLWPDFREEDYVRALVEFQGGNRRFGR 50
>gi|145477969|ref|XP_001425007.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392075|emb|CAK57609.1| unnamed protein product [Paramecium tetraurelia]
Length = 173
Score = 63.8 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 58/137 (42%), Gaps = 9/137 (6%)
Query: 43 FNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRV 102
IV ++GI L+ F W+RPV E+ +++ ++ +LK + ++V
Sbjct: 10 LRSIVEGCHQLGINYLSGFLLLSEKWKRPVGELKAILRFMEYYLK--IKEICCKKWCLQV 67
Query: 103 IGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCS 162
L + +++E ED T N L L IAF+Y R++I + + + ++
Sbjct: 68 ------LSPFMQKLIQEVEDLTANNRYLRLKIAFSYCGRNDICK-LCKKLVEKQTKECIQ 120
Query: 163 HDVDSSLIAKYLDTSDV 179
++ + +
Sbjct: 121 LMSFLKILQQNFYIHHL 137
>gi|322794684|gb|EFZ17665.1| hypothetical protein SINV_13250 [Solenopsis invicta]
Length = 130
Score = 63.4 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
Query: 115 CVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYL 174
L+ T + +N+ + N S+ +I +++ + I SG + ++ LI + L
Sbjct: 10 HYLRSHISITGSKSKINVSLLSNVDSKGKIVTLAQSLGKAISSGDLDPKEITDELITEKL 69
Query: 175 DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDR 234
++PDPDL + G L W +EF+ +P Y + S + F + L +YN +
Sbjct: 70 QIKEMPDPDLALIYGYTYSTHGILPWHTRTTEFLMLPMY-VNVSVKDFIYLLERYNKCIQ 128
Query: 235 RF 236
R+
Sbjct: 129 RY 130
>gi|3242703|gb|AAC23755.1| hypothetical protein [Arabidopsis thaliana]
Length = 121
Score = 63.4 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 40/123 (32%), Gaps = 40/123 (32%)
Query: 3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
+ P H+ I+DGN RWA GL GH G + E
Sbjct: 29 EELQRELMPRHVSFILDGNRRWAKRDGLTTAQGHEAGTKRIIE----------------- 71
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
+ + + ++V VIGN+ + + +L + E E+
Sbjct: 72 -----------------------IAERIGEETRKEVRVSVIGNKTKIPESLLKEIHEIEE 108
Query: 123 QTR 125
T+
Sbjct: 109 ATK 111
>gi|332023940|gb|EGI64158.1| Nogo-B receptor [Acromyrmex echinatior]
Length = 249
Score = 63.4 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/238 (15%), Positives = 84/238 (35%), Gaps = 44/238 (18%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGH-----RKGIEVFNEIVAAAAEVGIKNLTI 60
+++ P H+ II GH ++ I+ + I ++
Sbjct: 51 LTNKIPRHLMII----------------FGHLRLCDESVLDCVR-IIEWCISLDISYISF 93
Query: 61 FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
F +N +K + LK+ F + + I ++ +
Sbjct: 94 F---DSN---------GFLKKNEFILKEEFARKRPDLI------ECITWNPHAKTHQNGV 135
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ +N+ + + ++ +I+ +++ + + SG++ + I + L +P
Sbjct: 136 I---EGKSKINVSLLSDVDNKGKIATLTQSLAKMVSSGNLDQEKITIERITEELQIKGMP 192
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DPDL + L W +EF+ +P + + + F L +YN +R G
Sbjct: 193 DPDLALIRDYSCSTHGVLPWHTRTTEFLMLP-LYVNIPVKDFTCLLEKYNKCVQRHGK 249
>gi|312215630|emb|CBX95582.1| similar to di-trans,poly-cis-decaprenylcistransferase
[Leptosphaeria maculans]
Length = 350
Score = 63.4 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 44/238 (18%), Positives = 87/238 (36%), Gaps = 21/238 (8%)
Query: 8 SSPPDHIGIIM-----DGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF- 61
P H+ +I+ DG ++G G + EI A A GI L+++
Sbjct: 127 EKMPKHLSVIVEYQEDDG------SQGTAGLEGL---VNDVCEIAAWTASAGIPFLSVYE 177
Query: 62 -AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA 120
+ N+ P + S L F + SL ++ + + + +
Sbjct: 178 RTGVLKNYL-PQTHASIWSTLEAYFGPQRKPSLS---LRAPHLSSYSPPNTPLQNAELNE 233
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
L + + + RD I + + + + G V ++S LI L+
Sbjct: 234 GAPKEERQHLTVLLLSEHDGRDTIVDLTRTLAEMAQKGDVQQEQINSDLIDAQLNDHVSS 293
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+PDL++ +L + WQ+ +E +P+ + ++F AL + + R G
Sbjct: 294 EPDLLVLFSPTVQLKGYPPWQLRLTEIFHLPDN-KGVNYQVFLRALYNFAKVEMRLGR 350
>gi|171687915|ref|XP_001908898.1| hypothetical protein [Podospora anserina S mat+]
gi|170943919|emb|CAP69571.1| unnamed protein product [Podospora anserina S mat+]
Length = 358
Score = 63.0 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/235 (16%), Positives = 78/235 (33%), Gaps = 23/235 (9%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVF----NEIVAAAAEVGIKNLTIFAF 63
S P H+ +I+ L G+E +I A A GI L+I+
Sbjct: 143 SRLPKHLSVIL----------TLEDQGRSGAGLEKLVNEAADIAAWCASAGITQLSIY-- 190
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
+ VK + + + + +G +
Sbjct: 191 ------EKTGILKGYVKETHQTISQRLQTYFGPSFPSVSLGAPHIPPVQSGLLSLSNSPN 244
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
+N+ + RD I K + + + + D+ + L+ L S + +PD
Sbjct: 245 NENRKNINILLISAEDGRDSIVDLTKTLAEMSQRKKLQPADITTELVDAELSESVMEEPD 304
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L++ L+ + WQ+ +E +P+ ++F+ AL ++ R G
Sbjct: 305 LLVLFSPFVELAGYPPWQIRLTEIFHVPDN-QGVGYQVFYRALCKFAKAQMRMGR 358
>gi|169838901|ref|ZP_02872089.1| Undecaprenyl pyrophosphate synthetase [candidate division TM7
single-cell isolate TM7a]
Length = 43
Score = 63.0 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 201 QVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKK 242
+AYSEF +WPDF A+ +N RDRR+GGL+ K
Sbjct: 2 GIAYSEFYITDVFWPDFDENELDKAILSFNKRDRRYGGLNVK 43
>gi|324521907|gb|ADY47952.1| Nogo-B receptor [Ascaris suum]
Length = 235
Score = 63.0 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/232 (15%), Positives = 85/232 (36%), Gaps = 39/232 (16%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIF-AFSIN 66
S P H+ ++ + + ++ E++ A GIK ++I+ +S
Sbjct: 42 SRLPRHLAVL------YTEKTAI--------SLDTLCELLVECAFAGIKQVSIYDPWSCV 87
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRL 126
+ R + + + + G R + AED +
Sbjct: 88 HLHRKQ-------------------IMCQTAVIMNAKGRRSMPSLRFSTPGETAEDLEKA 128
Query: 127 NTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLII 186
++ L + + + + I + + + + +++ I L + +P+L++
Sbjct: 129 SSALIVNLLGKDAGKRAIVKVCRKL-----CANGDPSSINAQNITASLALETISEPELLL 183
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+ G + + + W + +E + + SR+ L+Q+N R+RRFG
Sbjct: 184 KVGQVESMCGYPPWSLRVTEILPLRRLDGHLSRQHLISFLDQFNRRERRFGR 235
>gi|322705651|gb|EFY97235.1| di-trans, poly-cis-decaprenylcistransferase [Metarhizium anisopliae
ARSEF 23]
Length = 327
Score = 62.6 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 42/233 (18%), Positives = 76/233 (32%), Gaps = 25/233 (10%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
P+H+ I+ A P+ R E E+ A A I L+I+ +
Sbjct: 118 GRKPNHLSAILK-----AEENQRPKADLDRLIEETA-ELAAWCASAEIPMLSIYEKT--- 168
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSL--DDDILCVLKEAEDQTR 125
++K + + Y G SL
Sbjct: 169 ------------GILKKHMPR-VYEAVMQKFTFYFAGQHPSLLLTSPHKDAYSSPALAGD 215
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
+ L L + R+ I + + + + G + D+ L+ L +P+PDL+
Sbjct: 216 KHGHLKLHLISAQDGRESIVDLTRTLAEMSQRGKISPRDISMELVDAELSEGIMPEPDLL 275
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
I LS + WQ+ +E + + F ++F AL ++ R G
Sbjct: 276 ILFSPNVELSGYPPWQIRLTEIFCLQDN-EGFGYQVFLKALRKFAKAQMRNGK 327
>gi|312066094|ref|XP_003136106.1| hypothetical protein LOAG_00518 [Loa loa]
gi|307768718|gb|EFO27952.1| hypothetical protein LOAG_00518 [Loa loa]
Length = 234
Score = 62.6 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 40/233 (17%), Positives = 87/233 (37%), Gaps = 39/233 (16%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
S P+H+ ++ + + +E +++ +A GI +T++
Sbjct: 41 QSHQLPNHLAVL------YTDK--------YAISLEALGKLIVHSAHAGITKITLYDP-- 84
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
W S L KL F+ + + K + V D + + T
Sbjct: 85 --WSYISSRQELLRKLTYDFMHR---TCAKQLVHVEF-------HDPDYSIFNPSFTHTS 132
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
+ I R I RA + + + + ++ I++ L + +PD +
Sbjct: 133 ------VKILGARDGRQSIVRACRKLCMECK-----PENITIEQISECLAEEHICEPDFL 181
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
++ G + ++ + W + +E + + +FS + F L++Y+ RDRR G
Sbjct: 182 LQIGNLETMAGYSPWVLRITEILQVKSLPSNFSHQQFLSYLHEYSSRDRRIGR 234
>gi|170103368|ref|XP_001882899.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164642270|gb|EDR06527.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 94
Score = 62.6 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 86 LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEIS 145
L + L + +++ V+G L + + +++AE TR NT L + +Y+SRDEI+
Sbjct: 11 LCEHGDILDEYGVRLNVLGRTSLLPEKVQLAVQKAEYITRRNTRAILNLCMSYTSRDEIT 70
Query: 146 RAIKNIFQ--DIESGSVCSHDVD 166
A+++ + D + + D+D
Sbjct: 71 TAVESCVRNADPSNPQITEEDID 93
>gi|322701570|gb|EFY93319.1| di-trans, poly-cis-decaprenylcistransferase [Metarhizium acridum
CQMa 102]
Length = 253
Score = 62.3 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 42/233 (18%), Positives = 76/233 (32%), Gaps = 25/233 (10%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
P H+ I+ A P+ R E E+ A A I L+I+ +
Sbjct: 44 GRKPTHLSAILK-----AEENQRPKADLDRLIEETA-ELAAWCASAEIPMLSIYEKT--- 94
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSL--DDDILCVLKEAEDQTR 125
++K + + Y G + SL
Sbjct: 95 ------------GILKKHMPR-VYEAVMQKFTFYFAGQQPSLLLTSPHKDAYSSPALAGD 141
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
+ L L + R+ I + + + + G + D+ L+ L +P+PDL+
Sbjct: 142 KHGHLKLHLISTQDGRESIVDLTRTLAEMSQRGKISPRDISMELVDAELSEGIMPEPDLL 201
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
I LS + WQ+ +E + + F ++F AL ++ R G
Sbjct: 202 ILFSPNVELSGYPPWQIRLTEIFCLQDN-EGFGYQVFLKALRKFAKAQMRNGK 253
>gi|242024649|ref|XP_002432739.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212518224|gb|EEB20001.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 258
Score = 62.3 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 38/231 (16%), Positives = 77/231 (33%), Gaps = 43/231 (18%)
Query: 11 PDHIGIIM--DGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ II+ DG + F+ IV I L+ + ++
Sbjct: 68 PTHLVIIVGEDG-----------------IAFKDFSNIVIWCLAAKISFLSFYDYT---- 106
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
R +E + + K L + + ++ ++N
Sbjct: 107 GRLKNEQNNYYNYLIDKSKINPNYLS------------------LASGKQNLKNGQKINC 148
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD-TSDVPDPDLIIR 187
+ L + + K I +++ ++ D++ I L +PDP+L++
Sbjct: 149 KIYLNFLSIEDGKRKFVELTKEISKNVACNNISISDINEQYINNELFKLCGLPDPELVVI 208
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+G L W + +EF+ D F L +Y+ ++RFG
Sbjct: 209 SGTIYSSFGLLPWHIRVTEFLQTISL-KDIQITDFVDILEKYSSCNQRFGK 258
>gi|294671222|ref|ZP_06736075.1| hypothetical protein NEIELOOT_02932 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307050|gb|EFE48293.1| hypothetical protein NEIELOOT_02932 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 66
Score = 61.9 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 34 AGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKK 88
GH+KG++ + A + G++ LT+FAFS NWRRP E+ L+ L K
Sbjct: 1 MGHKKGLDALENLCAECSAAGVEYLTVFAFSTENWRRPSDEVGFLMGLFCRHCKN 55
>gi|302411320|ref|XP_003003493.1| open reading frame [Verticillium albo-atrum VaMs.102]
gi|261357398|gb|EEY19826.1| open reading frame [Verticillium albo-atrum VaMs.102]
Length = 332
Score = 61.5 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 41/236 (17%), Positives = 78/236 (33%), Gaps = 33/236 (13%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFN------EIVAAAAEVGIKNLTIFAFS 64
P H+ ++ L G R E+ EI I LT++
Sbjct: 122 PQHLSVV------------LKVGQGGRHSAELERLVNEAAEIAVWCTCAKIPTLTVY--- 166
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLD--DDILCVLKEAED 122
R L + +S +K ++ + V S+ D++L +
Sbjct: 167 ----ERTGIFKKYLPHVQQSINQKFRSYFGRHQPSLTV-----SMPHADEVLESPALGDF 217
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
LN+ R+ + + + + + + D+ LI L +P+P
Sbjct: 218 ARADPRHLNISFISAEDGRESMVDLTRTLAEMSQKNKLSPKDIGMDLIGAELSEGIMPEP 277
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DL+I G L + W + +E +P+ + ++F AL + R G
Sbjct: 278 DLLILFGPHVELDGYPPWPIRLTEIFCLPDN-QEVGYQVFLRALRNFANAQFRKGK 332
>gi|55378478|ref|YP_136328.1| hypothetical protein rrnAC1717 [Haloarcula marismortui ATCC 43049]
gi|55231203|gb|AAV46622.1| unknown [Haloarcula marismortui ATCC 43049]
Length = 41
Score = 61.1 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
++WQ YSE F W +F + AL Y R RRFG
Sbjct: 1 MIWQSVYSELYFTDVNWQNFRLRDYLRALRDYQERQRRFGR 41
>gi|169603433|ref|XP_001795138.1| hypothetical protein SNOG_04726 [Phaeosphaeria nodorum SN15]
gi|111067366|gb|EAT88486.1| hypothetical protein SNOG_04726 [Phaeosphaeria nodorum SN15]
Length = 335
Score = 61.1 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/240 (17%), Positives = 84/240 (35%), Gaps = 32/240 (13%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEV----FNEIVAAAAEVGIKNLTIF-- 61
P H+ +++ G+E EI A A+ GI L+++
Sbjct: 119 EKLPKHLSVVV--------ELNEDDEQQGNAGLEGLVNDVCEIAAWASSAGIGFLSVYER 170
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
+ N+ + + I + L F L+K + +R + +
Sbjct: 171 TGVLKNY------LPQTHTSIDATLSSYFGPLRKPTLSLRA--------PHLSSYSPPST 216
Query: 122 DQTRLN---TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
+ N L + + + RD I + + + + G V ++ LI L
Sbjct: 217 PPSTSNEPRQHLTVLLLSEHDGRDTIVDLTRTLAEMAQRGDVRREQINMDLIDAQLSDHV 276
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+PDL+I +L + WQ+ +E +P+ + ++F AL + + R G
Sbjct: 277 SSEPDLLILFSPTVQLKGYPPWQLRLTEIFHLPDN-KGVNYQVFLRALYNFAKVEMRLGR 335
>gi|218513927|ref|ZP_03510767.1| undecaprenyl pyrophosphate synthase protein [Rhizobium etli 8C-3]
Length = 42
Score = 60.0 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/37 (59%), Positives = 29/37 (78%)
Query: 207 FVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSKKG 243
F+F+PEYWPD+S E+F AL ++ RDRRFGGLS +
Sbjct: 1 FIFVPEYWPDYSPEIFRSALEKFASRDRRFGGLSSQA 37
>gi|302925552|ref|XP_003054118.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735059|gb|EEU48405.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 327
Score = 58.0 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/236 (17%), Positives = 79/236 (33%), Gaps = 26/236 (11%)
Query: 5 MMSSSPPDHIGIIM--DGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFA 62
M P H+ +I+ + N R L R ++ EI A I +++
Sbjct: 116 MALKKMPKHLSVILKLEENHR--TKADLERL------LDEVAEIATWCACAEIPMFSVYE 167
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED 122
+ + + + + SL + ++ L + K
Sbjct: 168 KTGILKKHMPRVYDAVSQKFTFYFGPEHPSLTVTSP------HKEDLPTTLGESPK---- 217
Query: 123 QTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
+ L L + R+ + + + + + G + D+ LI L +P+P
Sbjct: 218 -----SHLRLHLISQQDGRESMVDLTRTLAEMSQKGKLSPRDISMELIDAELSEGIMPEP 272
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DL+I G LS + WQ+ +E + + ++F AL Y R G
Sbjct: 273 DLLITFGPYLELSGYPPWQIRLTEIFCLQDN-ERVGYQVFLKALQHYGGAQMRRGK 327
>gi|326430018|gb|EGD75588.1| hypothetical protein PTSG_06657 [Salpingoeca sp. ATCC 50818]
Length = 260
Score = 58.0 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/212 (18%), Positives = 77/212 (36%), Gaps = 34/212 (16%)
Query: 40 IEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIK 99
E +V G+K++TI+ +N L K S L++
Sbjct: 70 YEPLARLVMWCMASGVKHITIW----DN--------QGLCKGSSSLLRQYLQKAHVAYFG 117
Query: 100 VRVIGNRLSLDDDILCVLKEAEDQT-------------RLNTGLNLFIAFNYSSRDEISR 146
+ L D+ IL ++ + + TG + + R I +
Sbjct: 118 SSCASHPLVFDEAILAASQKRPCASTTPEEEGCKGADVQSGTGTRIHFCDDDEGRPAIVK 177
Query: 147 AIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSE 206
A++ + +VD + + L T+ VP+ DL++ E L L W + +E
Sbjct: 178 AVQEAARLQ-------RNVDVAWLDAKL-TATVPELDLVLMFSREPVLHGLLPWHMRVAE 229
Query: 207 FVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+F + + F A+N ++ ++RFG
Sbjct: 230 ILFCGPH-RHVTARTFIRAMNSFSRCEQRFGR 260
>gi|157140710|ref|XP_001647659.1| hypothetical protein AaeL_AAEL015541 [Aedes aegypti]
gi|108867010|gb|EAT32327.1| conserved hypothetical protein [Aedes aegypti]
Length = 156
Score = 58.0 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 161 CSHDVDSSLIAKYLD--TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS 218
D+ + L+ + L +PDP+L + G L WQ+ +EF+ + D
Sbjct: 77 SPSDITAELVDQRLQDQFHHIPDPELAVYFGSVCSTYGMLPWQIRLTEFLPLGARMQDVK 136
Query: 219 RELFFHALNQYNLRDRRFGG 238
F L ++ ++RFG
Sbjct: 137 PSHFVSCLYRFAKCEQRFGK 156
>gi|260948404|ref|XP_002618499.1| hypothetical protein CLUG_01958 [Clavispora lusitaniae ATCC 42720]
gi|238848371|gb|EEQ37835.1| hypothetical protein CLUG_01958 [Clavispora lusitaniae ATCC 42720]
Length = 276
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/237 (18%), Positives = 75/237 (31%), Gaps = 33/237 (13%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVF----NEIVAAAAEVGIKNLTIFAF 63
S P H+ I+ L G++ +E+ A GI LT++
Sbjct: 67 SKIPKHVSCIV----------NLRTEDSENGGVDGLVGDISELAAWCLSAGIPTLTVY-- 114
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILC--VLKEAE 121
E I+ L N++ + + V + A
Sbjct: 115 -------------EYNGAIRGSLP-ELEHYISRNLRAYFGSPVPTFSIRVPHSNVTRLAG 160
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
D L + + + + I K + + SG + D+ LI + L P+
Sbjct: 161 DDPSAEPNLEISLLSHVDGKPTIVELTKTMSELTASGELSPKDITVKLIDEELRELVGPE 220
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PDL+I G L D+ W + SE + + +F AL ++ G
Sbjct: 221 PDLLICFGPVLDLQDYPPWHIRLSEIYCDSDN-TSVNYAVFIRALRRFANCKVNLGK 276
>gi|46108748|ref|XP_381432.1| hypothetical protein FG01256.1 [Gibberella zeae PH-1]
Length = 326
Score = 57.6 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 45/243 (18%), Positives = 78/243 (32%), Gaps = 46/243 (18%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEV------FNEIVAAAAEVGIKNLTIF 61
S P H+ +I L HR +V EI A I L+++
Sbjct: 118 SKKPKHLSVI------------LKLEENHRTKADVERLLDEVAEIATWCACAEIPMLSVY 165
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKN-NIKVRVI-GNRLS----LDDDILC 115
+ LKK + N K G++
Sbjct: 166 EKT-------------------GILKKHMPRVCDTVNQKFAFYFGSKHPSLTVTSPHKDD 206
Query: 116 VLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD 175
+ T+ + L+L + RD + + + + + G + D+ + LI L
Sbjct: 207 FSSPFGENTKEHLRLHLISEQD--GRDSMVDLTRTLAEMSQRGKLSPRDISTELIDAELS 264
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
+ +PDL++ G LS + WQ+ +E + + E+F AL Y R
Sbjct: 265 EGIMAEPDLLLTFGPYLELSGYPPWQIRLTEIFCLQDN-ERVGYEVFLKALQHYGRAQMR 323
Query: 236 FGG 238
G
Sbjct: 324 HGK 326
>gi|239943926|ref|ZP_04695863.1| putative undecaprenyl diphosphate synthase [Streptomyces
roseosporus NRRL 15998]
gi|239990380|ref|ZP_04711044.1| putative undecaprenyl diphosphate synthase [Streptomyces
roseosporus NRRL 11379]
gi|291447390|ref|ZP_06586780.1| predicted protein [Streptomyces roseosporus NRRL 15998]
gi|291350337|gb|EFE77241.1| predicted protein [Streptomyces roseosporus NRRL 15998]
Length = 75
Score = 57.3 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHA-----LNQYNLRDRRFGG 238
+LWQ A+SE+ F +WP + F A L Y R RR+G
Sbjct: 1 MLWQSAHSEYCFCEVFWPASRKVDFLRACGPAGLRDYAARHRRYGA 46
>gi|170595985|ref|XP_001902594.1| hypothetical protein [Brugia malayi]
gi|158589640|gb|EDP28556.1| conserved hypothetical protein [Brugia malayi]
Length = 235
Score = 57.3 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 40/240 (16%), Positives = 86/240 (35%), Gaps = 53/240 (22%)
Query: 6 MSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSI 65
S P+H+ ++ + + +E ++++ +A GI LT++
Sbjct: 42 QSHQLPNHLAVL------YTDK--------YAISLEALSKLIVHSASAGITRLTLYDP-- 85
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
W F K+ ++I + L + E
Sbjct: 86 --WS-------------YIFSKRELLRRLTHDI----------MRKACSKQLVDVEFYDS 120
Query: 126 LNTGLNLFIAF-------NYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
+ +N I + R I RA + + + ++ I++YL
Sbjct: 121 DHFMINPNITYTTVKILGARDGRQSIVRACRRLCMECA-----PENITIEKISEYLAREH 175
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+ +PD +++ G ++D+ W + +E + + +FS + F L++Y+ RDRR G
Sbjct: 176 IWEPDFLLQIGNLGTMADYSPWVLRITEILQLKSLPSNFSYQQFLSYLHEYSSRDRRIGR 235
>gi|21707890|gb|AAH34152.1| Similar to hypothetical protein FLJ13102 [Homo sapiens]
Length = 124
Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
RLSDFLLWQ ++S VF P WP+++ F A+ Q+
Sbjct: 2 RLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQ 39
>gi|2231189|gb|AAB61971.1| ORF1 [Haemophilus influenzae]
Length = 33
Score = 56.9 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 208 VFIPEYWPDFSRELFFHALNQYNLRDRRFGGLS 240
F WPDF++ F A+ Y R RRFGG
Sbjct: 1 YFSDVLWPDFNQLEFNRAIASYQQRHRRFGGTE 33
>gi|255719388|ref|XP_002555974.1| KLTH0H02178p [Lachancea thermotolerans]
gi|238941940|emb|CAR30112.1| KLTH0H02178p [Lachancea thermotolerans]
Length = 350
Score = 56.9 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 43/237 (18%), Positives = 80/237 (33%), Gaps = 20/237 (8%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P + I+ R G + +++VA GIK+L ++ F
Sbjct: 131 LKLQKLPKRLAAIV------EKKREGDVGGGVSGVLNDGSDLVAWTISAGIKHLALYDFD 184
Query: 65 INNWRRPVSE--ISELVKLIKSFLKKGFYSLKKNNIKV-RVIGNRLSLDDDILCVLKEAE 121
+ +R V E S KL K + I++ + + +EA+
Sbjct: 185 GH-LKRNVDEFRKSVFHKLTKYYDPSNVPKFA---IRIPQWNKVYFNAP------GQEAD 234
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
D T + + + N R+ I + + + D+ LI L +
Sbjct: 235 DTTSKKVAIEISLLSNRDGRETIIELTRTMADLCAQNEMQLSDITMKLIDSELTQLVGHE 294
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PDL++ G L F W + +EF + + + +F L +Y G
Sbjct: 295 PDLLLYFGPNLDLQGFPPWHIRLTEFYWEQDN-DQVTYSVFIRGLKKYAACKINVGK 350
>gi|157167417|ref|XP_001653915.1| hypothetical protein AaeL_AAEL009647 [Aedes aegypti]
gi|108874239|gb|EAT38464.1| conserved hypothetical protein [Aedes aegypti]
Length = 275
Score = 56.1 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 161 CSHDVDSSLIAKYLD--TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS 218
D+ + L+ + L +PDP+L + G L WQ+ +EF+ + D
Sbjct: 196 SPSDITAELVDQRLQDQFHHIPDPELAVYFGSVCSTYGMLPWQIRLTEFLPLGARMQDVE 255
Query: 219 RELFFHALNQYNLRDRRFGG 238
F L ++ ++RFG
Sbjct: 256 PSHFVSCLYRFAKCEQRFGK 275
>gi|302760249|ref|XP_002963547.1| hypothetical protein SELMODRAFT_404826 [Selaginella moellendorffii]
gi|300168815|gb|EFJ35418.1| hypothetical protein SELMODRAFT_404826 [Selaginella moellendorffii]
Length = 575
Score = 56.1 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 48/115 (41%), Gaps = 7/115 (6%)
Query: 86 LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEIS 145
L +N+I+ IG+ L + + EA T NTG+ +A Y ++
Sbjct: 461 CDDKVEFLARNDIQFHCIGDSARLPRPLQAKISEA---TSGNTGMKFVMAIGYGGHSDLV 517
Query: 146 RAIKNIFQDIESGSVCSHDVDSSLIAKYLDT----SDVPDPDLIIRTGGEKRLSD 196
+A + + +++E G++ ++D +A+ L + R+ E RL
Sbjct: 518 QACQALAREVEQGTMAVEEIDQINLARRLMLECWHAGAARLHQRRRSAAEYRLLG 572
>gi|296413656|ref|XP_002836525.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630352|emb|CAZ80716.1| unnamed protein product [Tuber melanosporum]
Length = 324
Score = 56.1 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 42/231 (18%), Positives = 80/231 (34%), Gaps = 27/231 (11%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINN 67
P+H+ +++ R G I+ +EI A GIK L+++
Sbjct: 121 GKLPEHVSVVL----------EYERG-GLDTLIDEVSEISCWCASAGIKTLSVY------ 163
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
+ L I + + L K R + L E +
Sbjct: 164 -----EQTGILKSYISTSHRSISQRLHSYFGKSRPSIRVHAPPLSSLHEPGEEGRE---- 214
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L + + R+ + K + + G + S DV LI + + + +PDL+I
Sbjct: 215 VDLEVILISEEDGRESLVDLTKTLCDMAQRGKISSEDVSVELIDAEVTENTISEPDLLIL 274
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L + WQ+ +E + + ++F AL+++ + RFG
Sbjct: 275 FSPSVVLRGYPPWQIRLTEIFHVQDN-SGVGYQVFLRALHRFAKTEMRFGR 324
>gi|82595919|ref|XP_726047.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
gi|23481290|gb|EAA17612.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 107
Score = 55.7 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 151 IFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQV 202
++ S+ + + L T+D+P PD++IRT GE+RLSDF+L+QV
Sbjct: 54 QCNCGKACSLDENQIKILNYHNKLLTADLPPPDILIRTSGEQRLSDFMLYQV 105
>gi|328770136|gb|EGF80178.1| hypothetical protein BATDEDRAFT_25006 [Batrachochytrium
dendrobatidis JAM81]
Length = 273
Score = 55.7 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 50/284 (17%), Positives = 93/284 (32%), Gaps = 72/284 (25%)
Query: 2 VASMMSSSPPDHIGIIMDGN---------------------------------GRWAAAR 28
V S+ + P H+ +++D N R +
Sbjct: 15 VDSIYWNKLPRHVAVVID-NTLLEFAGAASDSSIIDTSLGLVKNTCNESSTFLRR--KSN 71
Query: 29 GL-------PRCAGH--RKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELV 79
L P + H +I+ +G+++LT++ E L
Sbjct: 72 ALLSGIPCQPESSIHSLDGIFASMLDILYLNVSLGVEHLTLY-----------DEYGVLK 120
Query: 80 KLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEA-EDQTRLNTGLNLFIAFNY 138
+ L L + N K+ G L + ++ L ++
Sbjct: 121 SHARLLLH-----LLETNSKLET-GFEDELVATVRIMVDHCLVWDVIGFVDLTVYFKSQS 174
Query: 139 SSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGE--KRLSD 196
S+D I RA+ ++ + DV L+ D DPDL+ GG+ +L +
Sbjct: 175 DSKDAIVRAVCDLSR--NDYPCTLEDVRDRLLE---DFPLNSDPDLVYIIGGKTGFQLHN 229
Query: 197 FLLWQVAYSEFVFIP--EYWPDFSRELFFHALNQYNLRDRRFGG 238
+ W + SEF +P +Y+ F + Y+ ++RFG
Sbjct: 230 YCPWSIRLSEFHHVPSLDYYGRVDMRDIFQGMKDYSKCEQRFGK 273
>gi|224148360|ref|XP_002336638.1| predicted protein [Populus trichocarpa]
gi|222836414|gb|EEE74821.1| predicted protein [Populus trichocarpa]
Length = 196
Score = 55.3 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
Query: 118 KEAEDQTRLNTGLNLFIAFNYSSRD-EISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT 176
E ++T +G+ + E+ + D +V S + + ++
Sbjct: 95 AEGVERTDKKSGVVGHAVHGSCGKWGEVQSLEASRTGDGVIPNVKSEKLLVVDVDSHMYM 154
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEY 213
S +PD++IR+ GE RLS+FLLWQ +
Sbjct: 155 SVATNPDIVIRSSGENRLSNFLLWQTSNCLLYSPNPP 191
>gi|149241249|ref|XP_001526291.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450414|gb|EDK44670.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 365
Score = 55.3 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 47/233 (20%), Positives = 82/233 (35%), Gaps = 11/233 (4%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFN-EIVAAAAEVGIKNLTIFAFSIN 66
+ P I I+D + G + G E+ A GI L I+ ++
Sbjct: 142 TKIPKSISCILD-------LKDDDDENGGKDGFMNLISELAAWTVSAGINKLIIYEYTGA 194
Query: 67 NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSL-DDDILCVLKEAEDQTR 125
+ + +L I L F S ++V L L D+ L E
Sbjct: 195 -MNQSSEFVVDLSNNITKNLVSYFGSESVPRFSIKVPNKNLILYSDETLANSNLNETYAS 253
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
L + + + + K + + +G + +D+ LI + L P+PDL+
Sbjct: 254 GQVDLEIDLLSRVDGKPTLVELTKTMSELAVNGDLSINDITIDLIDEELVELVGPEPDLL 313
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
I L D+ W + SE + P+ D + +F AL Q++ G
Sbjct: 314 ICFSPSLNLQDYPPWHIRLSEIYWEPDN-KDVNYAVFIRALKQFSGSKINLGK 365
>gi|322692317|gb|EFY84240.1| di-trans, poly-cis-decaprenylcistransferase [Metarhizium acridum
CQMa 102]
Length = 153
Score = 55.3 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 56/132 (42%), Gaps = 3/132 (2%)
Query: 104 GNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSH 163
G + + L ++E + N L L RD ++ + + +G V
Sbjct: 22 GISVFSPREEPDPLLKSEKSDQENYKLYLIA--GEDGRDTVAELTCAWAKKVYAGEVDMD 79
Query: 164 DVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFF 223
DV LI K L+ + +P+PDL+I GG L + WQ +E + + F ++F
Sbjct: 80 DVSMQLIQKELEETIMPNPDLLIVFGGHIDLCGYPPWQSRSAELSCMRDNG-RFRYKVFL 138
Query: 224 HALNQYNLRDRR 235
+AL Y + R
Sbjct: 139 NALKAYAGAEMR 150
>gi|145628148|ref|ZP_01783949.1| undecaprenyl pyrophosphate synthetase [Haemophilus influenzae
22.1-21]
gi|144979923|gb|EDJ89582.1| undecaprenyl pyrophosphate synthetase [Haemophilus influenzae
22.1-21]
Length = 53
Score = 55.3 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 47 VAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKK 95
+A A ++G+K LT++AFS NW RP EIS L+ L L + + K
Sbjct: 1 MAYARQIGVKVLTLYAFSSENWSRPEQEISALMSLFMQALDREVKNYIK 49
>gi|289573732|ref|ZP_06453959.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|289538163|gb|EFD42741.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
Length = 114
Score = 55.3 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRC-AGHRKGIEVFNEI 46
P HI ++ DGN RWA + G G+R G E+
Sbjct: 68 PRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEM 104
>gi|255726232|ref|XP_002548042.1| hypothetical protein CTRG_02339 [Candida tropicalis MYA-3404]
gi|240133966|gb|EER33521.1| hypothetical protein CTRG_02339 [Candida tropicalis MYA-3404]
Length = 347
Score = 55.3 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 42/213 (19%), Positives = 76/213 (35%), Gaps = 17/213 (7%)
Query: 31 PRCAGHRKG-IEVFNEIVAAAAEVGIKNLTIFAFS----INNWRRPVSEISELVKLIKSF 85
G + G I E+ A GI L I+ F+ N + L F
Sbjct: 147 DDENGGKDGLIASIGELSAWCLSAGIGKLIIYEFTGCLGQTNDCIADVKKEITKTLTLYF 206
Query: 86 LKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEIS 145
G S+ K +I+V +++ + + N L + + + +
Sbjct: 207 ---GTDSIPKFSIRV--------PHKNMIIYSDNYKSEQDQNVDLEIDLISRVDGKPTVV 255
Query: 146 RAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYS 205
K + + + + D+ LI + L P+PDL+I L D+ WQ+ S
Sbjct: 256 ELTKTMSELAANKELSIKDITIELIDEELRELVGPEPDLLISFAPSLNLEDYPPWQIRLS 315
Query: 206 EFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
E + P+ D + +F L Q++ + G
Sbjct: 316 EIYWEPDN-KDVNYAVFLRGLQQFSNCKIKIGK 347
>gi|19113007|ref|NP_596215.1| di-trans,poly-cis-decaprenylcistransferase [Schizosaccharomyces
pombe 972h-]
gi|74639014|sp|Q9Y7K8|UPPS_SCHPO RecName: Full=Probable undecaprenyl pyrophosphate synthase;
Short=UPP synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS
gi|4539259|emb|CAB39848.1| di-trans,poly-cis-decaprenylcistransferase [Schizosaccharomyces
pombe]
Length = 258
Score = 54.9 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 48/229 (20%), Positives = 73/229 (31%), Gaps = 37/229 (16%)
Query: 13 HIGIIM----DGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
HI +I+ DG G+ E+ A I+ LTI+
Sbjct: 62 HIAVIIECVEDG--------GIEGLIHDAC------ELSAWCVCSNIRELTIY------- 100
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
E +K ++K YS +G + E
Sbjct: 101 -----ERKGFLKQSPEAVEKAIYSHLPF-----YLGGDKCT-VHVTNPCSPDEKNQNDCV 149
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
L + + RD I + + + S V LI K L S +P+PDL+I
Sbjct: 150 DLKVHLIAKEDGRDAIIDLTRGLADLCTKKVISSTQVTLELIDKELKESVIPEPDLLIIF 209
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+L F WQ+ E P + + FF AL Y+ + R G
Sbjct: 210 APLLKLQGFPPWQLRLCEIFHDPILY-TTNYLTFFKALVHYSNAEMRLG 257
>gi|50556480|ref|XP_505648.1| YALI0F20108p [Yarrowia lipolytica]
gi|49651518|emb|CAG78457.1| YALI0F20108p [Yarrowia lipolytica]
Length = 301
Score = 54.2 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/236 (17%), Positives = 89/236 (37%), Gaps = 21/236 (8%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVG-IKNLTIFAFSIN 66
+ P+H+ +I+D G G + +EI A G IK L+++
Sbjct: 82 TKLPNHLAVIVD------LQDGSEEGGGVEGLVAQISEIAAWCCGTGEIKQLSVY--ERT 133
Query: 67 NWRRPVSEISELVKLIKSFLKKGF-YSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTR 125
+ + I ++ KL++ ++ + + I V G + V+ +T
Sbjct: 134 GCLKSYN-IKDVYKLVEEGMRSYYGSEMPSIKIDVPHSGAAHPTGESNGKVVNR---KTD 189
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
L + + R+ + K + + + + D+ +I + ++ V +P+L+
Sbjct: 190 NKNDLTIHLLSEEDGRECLVDLTKTLSELAIAKKLKPRDITVDVIDEQMNMLVVTEPELL 249
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPD---FSRELFFHALNQYNLRDRRFGG 238
I G + L F WQ+ +E + PD + +F AL + + G
Sbjct: 250 IVFGPQLDLQGFPPWQIRLTEIY----HQPDNDAVTYGVFLKALQSFASCKQNVGK 301
>gi|320590304|gb|EFX02747.1| di-cis-decaprenylcistransferase [Grosmannia clavigera kw1407]
Length = 352
Score = 54.2 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/243 (18%), Positives = 78/243 (32%), Gaps = 39/243 (16%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIE------VFNEIVAAAAEVGIKNLTIF 61
S P H+ +I L R+G E ++I A A GI L+++
Sbjct: 137 SRIPKHLSVI------------LRLEEHGREGAELERLVNEISDIAAWCASAGIPTLSVY 184
Query: 62 AFSINNWRRP------VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILC 115
+R + + S+ + ++ V I
Sbjct: 185 E------KRGVLKSYLPETHRAVSTRLASYFGRAHPAVTLQAPHVPAI--------HSAA 230
Query: 116 VLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD 175
+ E + + + RD + K + + + + DV LI L
Sbjct: 231 FPRAREYGDISEGHIKILLLSEEDGRDSLVDLTKTLADMAQRTKISASDVSIDLIDAELT 290
Query: 176 TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRR 235
S + DPDL+I G L + WQ+ +E +P+ ++F L Y + R
Sbjct: 291 ESIMTDPDLLILFGPYVELFGYPPWQIRLTEIFHVPDN-HSVGYQVFLWGLQNYAKAEMR 349
Query: 236 FGG 238
G
Sbjct: 350 VGR 352
>gi|206994194|emb|CAR79338.1| dehydrodolichyl diphosphate synthase [Oncorhynchus mykiss]
Length = 72
Score = 54.2 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 91 YSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKN 150
+L+K+ + +RV+G+ L D+ + A TR + L + F Y+SR EI+ A++
Sbjct: 1 DNLEKHGVCIRVLGDLTLLPLDLQQHIARAVVATRTHNKCFLNVCFAYTSRHEIANAVRE 60
Query: 151 IFQDIES 157
+ +E
Sbjct: 61 MAWGVEQ 67
>gi|159476404|ref|XP_001696301.1| predicted protein [Chlamydomonas reinhardtii]
gi|158282526|gb|EDP08278.1| predicted protein [Chlamydomonas reinhardtii]
Length = 386
Score = 53.8 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 139 SSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT-SDVPDPDLIIRTGGEKRLSDF 197
S+ +E A+ + + G + DV + L T D P DL++RT GE RLSDF
Sbjct: 215 SASEESVAAVSELQAAVRQGLLQPGDVTPVALHGALRTRHDCPPVDLLVRTSGETRLSDF 274
Query: 198 LLWQV 202
LLWQ
Sbjct: 275 LLWQA 279
>gi|241953359|ref|XP_002419401.1| undecaprenyl pyrophosphate synthetase, putative [Candida
dubliniensis CD36]
gi|223642741|emb|CAX42995.1| undecaprenyl pyrophosphate synthetase, putative [Candida
dubliniensis CD36]
Length = 379
Score = 53.8 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/236 (17%), Positives = 84/236 (35%), Gaps = 26/236 (11%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKG-IEVFNEIVAAAAEVGIKNLTIFAFS-- 64
P + I+D + G + G I +E+ A + G+ L I+ F+
Sbjct: 165 EKIPKIVSCILD-------LQDDEDENGGKDGLINSISELTAWSMSAGLTKLIIYEFTGA 217
Query: 65 -INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
I N V + K + + ++ +I+V ++ +++
Sbjct: 218 LIENSGCIVDLRKYITKTLVLYFGTE--AIPTFSIRV-----------PHKNLIIYSDNH 264
Query: 124 TRLNT-GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDP 182
NT L + + + + K + + + + D+ LI + L P+P
Sbjct: 265 IEGNTVDLEIDLISRIDGKPTLVELTKTMSELAVNRELSIRDITIDLIDEELHELVGPEP 324
Query: 183 DLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DL+I L D+ W + SE + P+ D + +F L Q++ G
Sbjct: 325 DLLISFAPSLNLEDYPPWHIRLSEIYWEPDN-KDVNYAVFLRGLQQFSNCKINIGK 379
>gi|320169506|gb|EFW46405.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 421
Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 50/114 (43%), Gaps = 6/114 (5%)
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYL-DTSDVPDPDLII 186
++I R I ++ + ++S + ++D + D +P+P+L+
Sbjct: 311 DRPVVYILSPMDGRTPIVDVALHLAKSVQSKKLQLSEIDVPRFTSLMQDMIPLPEPELLF 370
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPE--YWPDFSRELFFHALNQYNLRDRRFGG 238
+ G L +L W + +E I + YW + +F H L+ Y+ ++R+G
Sbjct: 371 QIGRTHSLVGYLPWHIRVTEIFHIRDLEYW---NYAMFIHLLHLYSKCEQRYGK 421
>gi|158288876|ref|XP_565967.2| AGAP000402-PA [Anopheles gambiae str. PEST]
gi|157018782|gb|EAL41212.2| AGAP000402-PA [Anopheles gambiae str. PEST]
Length = 238
Score = 53.0 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/200 (15%), Positives = 71/200 (35%), Gaps = 17/200 (8%)
Query: 40 IEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIK 99
+ + + I+ ++ + + +R E+ K +++ K +
Sbjct: 53 YRQLAQFIFWSLAAEIEYVSFYDHNGT-IKRNCEEV-------KRCVREAPVEGKDRIVW 104
Query: 100 VRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGS 159
+ G+ +DD + + + + + ++I + +
Sbjct: 105 LERSGSGAEVDDSPRQPV-------GSGRTVVVGFLSPEDGKQGLVSLSRSIGESVRRRD 157
Query: 160 VCSHDVDSSLIAKYLDTS--DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDF 217
+ + DV L+ L + VPDPDL + G L WQ+ +EF+ + D
Sbjct: 158 LYAADVSIELLDSRLQAALGAVPDPDLALYFGDVCSTYGLLPWQIRLTEFLPLGTRLRDS 217
Query: 218 SRELFFHALNQYNLRDRRFG 237
+ F L++Y ++R G
Sbjct: 218 TEREFVRCLHRYAKCEQRLG 237
>gi|167756901|ref|ZP_02429028.1| hypothetical protein CLORAM_02450 [Clostridium ramosum DSM 1402]
gi|167703076|gb|EDS17655.1| hypothetical protein CLORAM_02450 [Clostridium ramosum DSM 1402]
Length = 63
Score = 53.0 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAA 27
+ + P HI IMDGNGRWA
Sbjct: 16 LDKDNIPQHIAFIMDGNGRWAKK 38
>gi|227874986|ref|ZP_03993135.1| hypothetical protein HMPREF0577_0436 [Mobiluncus mulieris ATCC
35243]
gi|227844435|gb|EEJ54595.1| hypothetical protein HMPREF0577_0436 [Mobiluncus mulieris ATCC
35243]
Length = 82
Score = 52.2 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 18/32 (56%), Positives = 19/32 (59%)
Query: 15 GIIMDGNGRWAAARGLPRCAGHRKGIEVFNEI 46
IIMDGNGRWA A+GL R AG G E
Sbjct: 2 AIIMDGNGRWANAQGLNRTAGREAGEYALTER 33
>gi|773386|gb|AAC41672.1| open reading frame [Neurospora crassa]
gi|1583207|prf||2120297A ORF
Length = 283
Score = 52.2 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 41/234 (17%), Positives = 80/234 (34%), Gaps = 23/234 (9%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNE----IVAAAAEVGIKNLTIFAFS 64
P+H+ +I+ L A G+ E I A A I L+I+ +
Sbjct: 69 RLPNHLSVIL----------TLDEDARGGTGLAKLIEEASDIAAWCASARIPQLSIYEKT 118
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
+ + + + + + N I + L + +
Sbjct: 119 GT--------LKGYLPRVHRSMTQKLAAYFGPNTPGIGIRAPHCPSMETAPTLAASRSEN 170
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
L++ I RD I K + + G + + D+ L+ L S + +PDL
Sbjct: 171 DGIKHLSVMILSAEDGRDSIVDLTKTLADMSQRGKISTSDITIELVDAELSESVMGEPDL 230
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
++ G L + WQV +E + + + ++F+ L +Y R+G
Sbjct: 231 LLLFGPRVELVGYPPWQVRLTEISHVQDN-EGVNYQVFYRGLLKYAGAQMRWGR 283
>gi|289617830|emb|CBI55407.1| unnamed protein product [Sordaria macrospora]
Length = 332
Score = 52.2 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 41/234 (17%), Positives = 79/234 (33%), Gaps = 23/234 (9%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNE----IVAAAAEVGIKNLTIFAFS 64
P H+ +I+ L A G+ E I A A I L+I+ +
Sbjct: 118 RLPKHLSVIL----------TLDEDARGGTGLAKLIEEASDIAAWCASARIPQLSIYEKT 167
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
+ + + + + + N I + L + +
Sbjct: 168 GT--------LKGYLPRVHRSMTQKLAAYFGPNTPGIGIRAPHCPSIETAPTLAASRIEN 219
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
L++ I RD I K + + G + + D+ L+ L S + +PDL
Sbjct: 220 DGLKHLSVMILSAEDGRDSIVDLTKTLADMSQRGKISTSDITIELVDAELSESVMGEPDL 279
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
++ G L + WQV +E + + + ++F+ L +Y R+G
Sbjct: 280 LLLFGPRVELVGYPPWQVRLTEISHVQDN-EGVNYQVFYRGLLKYAGAQMRWGR 332
>gi|50291339|ref|XP_448102.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527413|emb|CAG61053.1| unnamed protein product [Candida glabrata]
Length = 363
Score = 51.9 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 36/237 (15%), Positives = 81/237 (34%), Gaps = 22/237 (9%)
Query: 4 SMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGI-EVFNEIVAAAAEVGIKNLTIFA 62
++ P + I++ A G G G+ E+V+ + G+K + ++
Sbjct: 147 TLRLKKMPTRVAFILE-----AKPIGQ--VGGGLYGLLSNAAEVVSWSVYAGVKEVILY- 198
Query: 63 FSINNWRRPVSEISELVKLIKSFLKKGFYS-LKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
++ + L+ YS L + + + + + +
Sbjct: 199 -----------DMDGYFQKNIFHLEDEIYSSLTNYSSRNSIPNFTIYVPHSGKTYKRYHT 247
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+++ + + R + +K+I Q + + ++ L+ L +
Sbjct: 248 GNNESREHISITVLSHIDGRPTVVNVVKSIIQLCKESKMSVGEISMELVNSVLTRLVCDE 307
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PDL++ G L F WQ+ +E + + S +F ALN Y+ G
Sbjct: 308 PDLLVYFGPTLDLQGFPPWQIRLTELFWEQDN-NRVSYSVFIRALNHYSNCKINLGK 363
>gi|164422996|ref|XP_963954.2| hypothetical protein NCU09312 [Neurospora crassa OR74A]
gi|157069905|gb|EAA34718.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 332
Score = 51.9 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 41/234 (17%), Positives = 80/234 (34%), Gaps = 23/234 (9%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNE----IVAAAAEVGIKNLTIFAFS 64
P+H+ +I+ L A G+ E I A A I L+I+ +
Sbjct: 118 RLPNHLSVIL----------TLDEDARGGTGLAKLIEEASDIAAWCASARIPQLSIYEKT 167
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
+ + + + + + N I + L + +
Sbjct: 168 GT--------LKGYLPRVHRSMTQKLAAYFGPNTPGIGIRAPHCPSMETAPTLAASRSEN 219
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
L++ I RD I K + + G + + D+ L+ L S + +PDL
Sbjct: 220 DGIKHLSVMILSAEDGRDSIVDLTKTLADMSQRGKISTSDITIELVDAELSESVMGEPDL 279
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
++ G L + WQV +E + + + ++F+ L +Y R+G
Sbjct: 280 LLLFGPRVELVGYPPWQVRLTEISHVQDN-EGVNYQVFYRGLLKYAGAQMRWGR 332
>gi|170103366|ref|XP_001882898.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164642269|gb|EDR06526.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 68
Score = 51.9 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAY-SEFVFIPEYWPDFSRELFFHALNQYNLR 232
P D+++RT G KRLSDF+L Q ++ +WPD F + + +
Sbjct: 7 SPPLDILVRTSGVKRLSDFILCQCCEDTQIQISSTFWPDL--LDFVPIILDFQRK 59
>gi|238880898|gb|EEQ44536.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 349
Score = 51.5 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/235 (16%), Positives = 79/235 (33%), Gaps = 24/235 (10%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKG-IEVFNEIVAAAAEVGIKNLTIFAFS-- 64
P + I+D + G + G I +E+ A + G+ L I+ F+
Sbjct: 135 EKIPKIVSCILD-------LQDDEDENGGKDGLINSISELTAWSMSAGLTKLIIYEFTGA 187
Query: 65 -INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
I N V + K + + ++ +I++ ++
Sbjct: 188 LIENSGCIVDLRKYITKTLVLYFGTE--AIPTFSIRI----------PHKNLIIYSDNHI 235
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
L + + + + K + + + + D+ LI + L P+PD
Sbjct: 236 DSNAVDLEIDLISRIDGKPTLVELTKTMSELAVNRELSIRDITIDLIDEELHELVGPEPD 295
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L+I L D+ W + SE + P+ D + +F L Q++ G
Sbjct: 296 LLISFAPSLNLEDYPPWHIRLSEIYWEPDN-KDVNYAVFLRGLQQFSNCKINIGK 349
>gi|256786634|ref|ZP_05525065.1| hypothetical protein SlivT_19288 [Streptomyces lividans TK24]
Length = 57
Score = 51.5 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARGLPRC-AGHRKG 39
+V + P HIGI++DGN RWA G+ G+R G
Sbjct: 17 LVRELEGRPRPQHIGIMLDGNRRWAKMSGIDDPREGYRAG 56
>gi|328716839|ref|XP_003246051.1| PREDICTED: nogo-B receptor-like [Acyrthosiphon pisum]
gi|239790664|dbj|BAH71880.1| ACYPI27127 [Acyrthosiphon pisum]
Length = 251
Score = 51.5 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/200 (16%), Positives = 78/200 (39%), Gaps = 25/200 (12%)
Query: 40 IEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIK 99
E +++A A + + ++ + N E L +F + L K N
Sbjct: 76 YEYLAKLLAWALFLEVPVVSFY--HNEN-GISPEE------LFFAFRDQYSSLLTKVNWG 126
Query: 100 VRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGS 159
+ +D+I K+ + + + + I + S+ ++ A++ +
Sbjct: 127 LEF-------NDNIKFESKKCINGYKWEPRIEVNILTSKHSKLQLVNALRTVC------- 172
Query: 160 VCSHDVDSSLIAKYLD-TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS 218
+ +L+ ++ T + +PDL++ G L W +EF+ + ++ + +
Sbjct: 173 STEEEFSDTLVELAINKTFPMVEPDLVVICGKSCTTFGLLPWHTRVTEFLTLKTHY-NVT 231
Query: 219 RELFFHALNQYNLRDRRFGG 238
F+ L QY+ ++RFG
Sbjct: 232 FLKFYKLLEQYSRNEQRFGK 251
>gi|167957222|ref|ZP_02544296.1| Undecaprenyl pyrophosphate synthetase [candidate division TM7
single-cell isolate TM7c]
Length = 59
Score = 51.1 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 66 NNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLK 118
NW RP E+S L+KL ++K ++ KN I+ V G + ++ + + LK
Sbjct: 2 ENWNRPQDEVSTLMKLFLKYIKSERKNMMKNKIRFFVSGRKNNVPEKLQKKLK 54
>gi|320584146|gb|EFW98357.1| hypothetical protein HPODL_0037 [Pichia angusta DL-1]
Length = 362
Score = 50.7 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 66/189 (34%), Gaps = 9/189 (4%)
Query: 45 EIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIG 104
E+ A GI N TI+ + + + +L +S +K +N+ I
Sbjct: 178 ELTAWCLSSGIPNFTIYEY-------HGILKNHIPELRRSIHRKLVAYFGTSNVPTYQI- 229
Query: 105 NRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHD 164
L+ + + + + R I K + Q ++ + D
Sbjct: 230 KIPHLNLSYAGSYDGEYGDSEDKPDIEISLLSVVDGRPTIVELTKVMSQLSKNHELSDKD 289
Query: 165 VDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFH 224
++ I + L P+PDLI+ L + W SE + P+ + S +F
Sbjct: 290 INMKFIDQELQQLVGPEPDLIVMFQPYLNLQGYPPWHTRLSEMYWEPDN-DEVSYAVFLR 348
Query: 225 ALNQYNLRD 233
AL +Y+
Sbjct: 349 ALQKYSTCK 357
>gi|68465625|ref|XP_723174.1| potential lipid particle protein [Candida albicans SC5314]
gi|68465918|ref|XP_723027.1| potential lipid particle protein [Candida albicans SC5314]
gi|46445040|gb|EAL04311.1| potential lipid particle protein [Candida albicans SC5314]
gi|46445196|gb|EAL04466.1| potential lipid particle protein [Candida albicans SC5314]
Length = 349
Score = 50.7 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/235 (16%), Positives = 79/235 (33%), Gaps = 24/235 (10%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKG-IEVFNEIVAAAAEVGIKNLTIFAFS-- 64
P + I+D + G + G I +E+ A + G+ L I+ F+
Sbjct: 135 EKIPKIVSCILD-------LQDDEDENGGKDGLINSISELTAWSMSAGLTKLIIYEFTGA 187
Query: 65 -INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
I N V + K + + ++ +I++ ++
Sbjct: 188 LIENSGCIVDLRKYITKTLVLYFGTE--AIPTFSIRI----------PHKNLIIYSDNHI 235
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPD 183
L + + + + K + + + + D+ LI + L P+PD
Sbjct: 236 DGNAVDLEIDLISRIDGKPTLVELTKTMSELAVNRELSIRDITIDLIDEELHELVGPEPD 295
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L+I L D+ W + SE + P+ D + +F L Q++ G
Sbjct: 296 LLISFAPSLNLEDYPPWHIRLSEIYWEPDN-KDVNYAVFLRGLQQFSNCKINIGK 349
>gi|207111198|ref|ZP_03245360.1| hypothetical protein HpylH_19223 [Helicobacter pylori
HPKX_438_CA4C1]
Length = 61
Score = 50.7 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
RP SE+ L+K++K +LK ++ NNI+ R IG+ ++ + + E+ TR
Sbjct: 1 RPKSEVDFLMKMLKKYLKDERFTYLDNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKD 60
Query: 130 L 130
Sbjct: 61 F 61
>gi|50310593|ref|XP_455316.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644452|emb|CAG98024.1| KLLA0F05203p [Kluyveromyces lactis]
Length = 333
Score = 50.3 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 41/189 (21%), Positives = 70/189 (37%), Gaps = 9/189 (4%)
Query: 45 EIVAAAAEVGIKNLTIFAFS---INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVR 101
++V GIK+L ++ + N + I KL K F G ++ K IK+
Sbjct: 143 DVVCWTVSAGIKHLILYDYDGKMKQNVHELRAGIH--HKLAKYF---GLDNVPKFAIKIP 197
Query: 102 VIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVC 161
D+ L + T+ + + + RD I K + G +
Sbjct: 198 HTNQIFFDKDEDQKDLSPEKSTTKHKVAVEISLLSKVDGRDTILELTKTMADLCAKGQLK 257
Query: 162 SHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSREL 221
DVD+ L+ + L +PDL++ G L F W + +E + + S +
Sbjct: 258 VEDVDTKLVNQELTQLVGHEPDLLLFFGPALDLQGFPPWHIRLTELYWETDN-DQVSYYV 316
Query: 222 FFHALNQYN 230
F L QY
Sbjct: 317 FIRGLKQYA 325
>gi|15840524|ref|NP_335561.1| hypothetical protein MT1118.2 [Mycobacterium tuberculosis CDC1551]
gi|31792279|ref|NP_854772.1| hypothetical protein Mb1116A [Mycobacterium bovis AF2122/97]
gi|57116822|ref|YP_177637.1| hypothetical protein Rv1087A [Mycobacterium tuberculosis H37Rv]
gi|121637017|ref|YP_977240.1| hypothetical protein BCG_1146 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148660873|ref|YP_001282396.1| hypothetical protein MRA_1098 [Mycobacterium tuberculosis H37Ra]
gi|148822297|ref|YP_001287051.1| hypothetical protein TBFG_11106 [Mycobacterium tuberculosis F11]
gi|224989490|ref|YP_002644177.1| hypothetical protein JTY_1119 [Mycobacterium bovis BCG str. Tokyo
172]
gi|253799876|ref|YP_003032877.1| hypothetical protein TBMG_02899 [Mycobacterium tuberculosis KZN
1435]
gi|254363995|ref|ZP_04980041.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
Haarlem]
gi|260186010|ref|ZP_05763484.1| hypothetical protein MtubCP_08288 [Mycobacterium tuberculosis
CPHL_A]
gi|260200123|ref|ZP_05767614.1| hypothetical protein MtubT4_08353 [Mycobacterium tuberculosis T46]
gi|260204319|ref|ZP_05771810.1| hypothetical protein MtubK8_08433 [Mycobacterium tuberculosis K85]
gi|289442515|ref|ZP_06432259.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289446675|ref|ZP_06436419.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
gi|289555129|ref|ZP_06444339.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605]
gi|289569076|ref|ZP_06449303.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289573733|ref|ZP_06453960.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|289744828|ref|ZP_06504206.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289749621|ref|ZP_06508999.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289753150|ref|ZP_06512528.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|294992927|ref|ZP_06798618.1| hypothetical protein Mtub2_00070 [Mycobacterium tuberculosis 210]
gi|297633623|ref|ZP_06951403.1| hypothetical protein MtubK4_05859 [Mycobacterium tuberculosis KZN
4207]
gi|297730609|ref|ZP_06959727.1| hypothetical protein MtubKR_05944 [Mycobacterium tuberculosis KZN
R506]
gi|313657937|ref|ZP_07814817.1| hypothetical protein MtubKV_05939 [Mycobacterium tuberculosis KZN
V2475]
gi|13880700|gb|AAK45375.1| hypothetical protein MT1118.2 [Mycobacterium tuberculosis CDC1551]
gi|31617867|emb|CAD93977.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
gi|41353644|emb|CAE55355.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
gi|121492664|emb|CAL71133.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|134149509|gb|EBA41554.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
Haarlem]
gi|148505025|gb|ABQ72834.1| hypothetical protein MRA_1098 [Mycobacterium tuberculosis H37Ra]
gi|148720824|gb|ABR05449.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
gi|224772603|dbj|BAH25409.1| hypothetical protein JTY_1119 [Mycobacterium bovis BCG str. Tokyo
172]
gi|253321379|gb|ACT25982.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
1435]
gi|289415434|gb|EFD12674.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289419633|gb|EFD16834.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
gi|289439761|gb|EFD22254.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605]
gi|289538164|gb|EFD42742.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|289542830|gb|EFD46478.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289685356|gb|EFD52844.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289690208|gb|EFD57637.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289693737|gb|EFD61166.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|326904687|gb|EGE51620.1| hypothetical protein TBPG_02596 [Mycobacterium tuberculosis W-148]
gi|328459621|gb|AEB05044.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
4207]
Length = 106
Score = 50.3 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 17/62 (27%)
Query: 135 AFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRL 194
Y R E A+ I + L+TS PDPDL+IRT GE+RL
Sbjct: 3 CVGYGDRREFVDAVA-----------------VEAICENLNTSGQPDPDLVIRTSGEQRL 45
Query: 195 SD 196
S
Sbjct: 46 SG 47
>gi|150866879|ref|XP_001386621.2| hypothetical protein PICST_63927 [Scheffersomyces stipitis CBS
6054]
gi|149388135|gb|ABN68592.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 354
Score = 50.3 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 46/235 (19%), Positives = 85/235 (36%), Gaps = 28/235 (11%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKG-IEVFNEIVAAAAEVGIKNLTIFAFS-- 64
+ P I I+D + G G I +E+ A GI +L I+ ++
Sbjct: 134 AKIPRVISCILD-------LKDDDDENGGIDGLIGSISELAAWTVSAGIPHLVIYEYNGV 186
Query: 65 -INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ 123
+ N L +L + K + I I + + +
Sbjct: 187 VVEN-------KGNLAQLNRYISKNLAAYFGTDLIPSYAI----RIPHHNTVIYSSHTGK 235
Query: 124 TRLNT-----GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD 178
T++N+ L +++ + I K + + ++ + +D+ LI + L
Sbjct: 236 TQVNSAERDVDLEIWLLSREDGKPTIVELTKTMSELAQNNELSVNDITIDLIDEELAELV 295
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
P+PDL+I G L D+ W + SE + PE D +F AL Q++
Sbjct: 296 GPEPDLLISFGPSLDLQDYPPWHIRLSEIYWEPEN-KDVIYAVFIRALQQFSNCK 349
>gi|148905738|gb|ABR16033.1| unknown [Picea sitchensis]
Length = 279
Score = 49.9 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/207 (12%), Positives = 87/207 (42%), Gaps = 31/207 (14%)
Query: 40 IEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIK 99
+ +++ A+VG+++++++ ++ L+K + +L N +
Sbjct: 96 MSKVCKLLMWLADVGVQHVSLY---------------DMEGLLKQSKRSLEKTLGNLNTQ 140
Query: 100 VRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGS 159
++++ + +E Q+ + + + ++ I++A
Sbjct: 141 IQLVSTWEEHEKWT------SESQSTEQPIMTVELLSICDGKEGIAKAA-RYLCANTLQK 193
Query: 160 VCSH------DVDSSLIAKYLDTSDV--PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIP 211
+ S + + I + L+ + P+PDL++ G + L F W++ ++E +++
Sbjct: 194 INSEGQHIDLKLTEADINRGLEAAGCAGPEPDLLLVFGFTRCLLGFPAWRLPFTEIIYMG 253
Query: 212 EYWPDFSRELFFHALNQYNLRDRRFGG 238
+ + +A+++++ +++R+G
Sbjct: 254 ML-KSLTLDSLLNAVDEFSTKNQRYGK 279
>gi|167966604|ref|ZP_02548881.1| hypothetical protein MtubH3_00439 [Mycobacterium tuberculosis
H37Ra]
Length = 109
Score = 49.6 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 163 HDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSD 196
V I + L+TS PDPDL+IRT GE+RLS
Sbjct: 11 DAVAVEAICENLNTSGQPDPDLVIRTSGEQRLSG 44
>gi|215402913|ref|ZP_03415094.1| hypothetical protein Mtub0_04311 [Mycobacterium tuberculosis
02_1987]
gi|215410701|ref|ZP_03419509.1| hypothetical protein Mtub9_05110 [Mycobacterium tuberculosis
94_M4241A]
gi|215410704|ref|ZP_03419512.1| hypothetical protein Mtub9_05125 [Mycobacterium tuberculosis
94_M4241A]
gi|215426378|ref|ZP_03424297.1| hypothetical protein MtubT9_08327 [Mycobacterium tuberculosis T92]
gi|215429955|ref|ZP_03427874.1| hypothetical protein MtubE_04573 [Mycobacterium tuberculosis
EAS054]
gi|215445248|ref|ZP_03432000.1| hypothetical protein MtubT_04638 [Mycobacterium tuberculosis T85]
gi|219556966|ref|ZP_03536042.1| hypothetical protein MtubT1_06555 [Mycobacterium tuberculosis T17]
gi|254231368|ref|ZP_04924695.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|289757174|ref|ZP_06516552.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|308231729|ref|ZP_07413574.2| hypothetical protein TMAG_03906 [Mycobacterium tuberculosis
SUMu001]
gi|308370068|ref|ZP_07420184.2| hypothetical protein TMBG_01521 [Mycobacterium tuberculosis
SUMu002]
gi|308370610|ref|ZP_07422116.2| hypothetical protein TMCG_00710 [Mycobacterium tuberculosis
SUMu003]
gi|308371857|ref|ZP_07426475.2| hypothetical protein TMDG_03909 [Mycobacterium tuberculosis
SUMu004]
gi|308373030|ref|ZP_07430787.2| hypothetical protein TMEG_00981 [Mycobacterium tuberculosis
SUMu005]
gi|308374200|ref|ZP_07435183.2| hypothetical protein TMFG_02912 [Mycobacterium tuberculosis
SUMu006]
gi|308375351|ref|ZP_07443619.2| hypothetical protein TMGG_03169 [Mycobacterium tuberculosis
SUMu007]
gi|308376614|ref|ZP_07439436.2| hypothetical protein TMHG_00265 [Mycobacterium tuberculosis
SUMu008]
gi|308377616|ref|ZP_07479814.2| hypothetical protein TMIG_03836 [Mycobacterium tuberculosis
SUMu009]
gi|308378824|ref|ZP_07484001.2| hypothetical protein TMJG_02768 [Mycobacterium tuberculosis
SUMu010]
gi|308379966|ref|ZP_07488239.2| hypothetical protein TMKG_01584 [Mycobacterium tuberculosis
SUMu011]
gi|308398601|ref|ZP_07492745.2| hypothetical protein TMLG_03966 [Mycobacterium tuberculosis
SUMu012]
gi|124600427|gb|EAY59437.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|289712738|gb|EFD76750.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|308216236|gb|EFO75635.1| hypothetical protein TMAG_03906 [Mycobacterium tuberculosis
SUMu001]
gi|308325422|gb|EFP14273.1| hypothetical protein TMBG_01521 [Mycobacterium tuberculosis
SUMu002]
gi|308331427|gb|EFP20278.1| hypothetical protein TMCG_00710 [Mycobacterium tuberculosis
SUMu003]
gi|308335239|gb|EFP24090.1| hypothetical protein TMDG_03909 [Mycobacterium tuberculosis
SUMu004]
gi|308339043|gb|EFP27894.1| hypothetical protein TMEG_00981 [Mycobacterium tuberculosis
SUMu005]
gi|308342721|gb|EFP31572.1| hypothetical protein TMFG_02912 [Mycobacterium tuberculosis
SUMu006]
gi|308346598|gb|EFP35449.1| hypothetical protein TMGG_03169 [Mycobacterium tuberculosis
SUMu007]
gi|308350520|gb|EFP39371.1| hypothetical protein TMHG_00265 [Mycobacterium tuberculosis
SUMu008]
gi|308355168|gb|EFP44019.1| hypothetical protein TMIG_03836 [Mycobacterium tuberculosis
SUMu009]
gi|308359122|gb|EFP47973.1| hypothetical protein TMJG_02768 [Mycobacterium tuberculosis
SUMu010]
gi|308363041|gb|EFP51892.1| hypothetical protein TMKG_01584 [Mycobacterium tuberculosis
SUMu011]
gi|308366691|gb|EFP55542.1| hypothetical protein TMLG_03966 [Mycobacterium tuberculosis
SUMu012]
gi|323720448|gb|EGB29536.1| hypothetical protein TMMG_03088 [Mycobacterium tuberculosis
CDC1551A]
Length = 103
Score = 49.6 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 163 HDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSD 196
V I + L+TS PDPDL+IRT GE+RLS
Sbjct: 11 DAVAVEAICENLNTSGQPDPDLVIRTSGEQRLSG 44
>gi|332374598|gb|AEE62440.1| unknown [Dendroctonus ponderosae]
Length = 263
Score = 49.6 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 56/126 (44%), Gaps = 5/126 (3%)
Query: 113 ILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAK 172
+ LK + +++ ++L I + R I R +++ QD ++G +D L A+
Sbjct: 143 LQKRLKPLAENGKVHVTIHLRIISPQNGRQSIVRLAQDLCQDAQAGEWTIESLDQKLRAE 202
Query: 173 YLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLR 232
+ + PDPDL + G L + WQ+ +EF+ I + F L+ +
Sbjct: 203 F----EFPDPDLGLSCGNFLSLLHYPPWQIRVTEFLSIKTH-HRIKYRQFLEQLSIFASC 257
Query: 233 DRRFGG 238
++R G
Sbjct: 258 EQRLGR 263
>gi|254550081|ref|ZP_05140528.1| hypothetical protein Mtube_06424 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
Length = 110
Score = 49.6 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 163 HDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSD 196
V I + L+TS PDPDL+IRT GE+RLS
Sbjct: 18 DAVAVEAICENLNTSGQPDPDLVIRTSGEQRLSG 51
>gi|294671221|ref|ZP_06736074.1| hypothetical protein NEIELOOT_02931 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307049|gb|EFE48292.1| hypothetical protein NEIELOOT_02931 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 36
Score = 49.6 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 12/18 (66%), Positives = 13/18 (72%)
Query: 9 SPPDHIGIIMDGNGRWAA 26
P HI +IMDGNGRWA
Sbjct: 13 RIPRHIAVIMDGNGRWAK 30
>gi|170062096|ref|XP_001866521.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167880131|gb|EDS43514.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 276
Score = 49.2 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 32/83 (38%), Gaps = 7/83 (8%)
Query: 161 CSHDVDSSLI--AKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS 218
S D+ + + DVPDPDL + G L WQ+ +E F+ P
Sbjct: 196 SSEDITIEAVDRRQRDHFRDVPDPDLAVYYGAVCCTYGLLPWQIRLTE--FVQVRAPSLR 253
Query: 219 ---RELFFHALNQYNLRDRRFGG 238
+ L ++ ++RFG
Sbjct: 254 DTGPDHLVDCLFRFAKCEQRFGK 276
>gi|254583758|ref|XP_002497447.1| ZYRO0F05764p [Zygosaccharomyces rouxii]
gi|238940340|emb|CAR28514.1| ZYRO0F05764p [Zygosaccharomyces rouxii]
Length = 337
Score = 49.2 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 69/197 (35%), Gaps = 21/197 (10%)
Query: 45 EIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIG 104
E+V GIK+L ++ F ++K ++ + + G
Sbjct: 159 EVVCWTVSAGIKHLILYDF------------DGILKKNVLEFREEIRAKLS-----KYFG 201
Query: 105 NRLSLDDDILCVLKEAEDQTRLNTG---LNLFIAFNYSSRDEISRAIKNIFQDIESGSVC 161
+ K + ++ L + + N R I K + + +S +
Sbjct: 202 PSNVPKFALRIPHKNKVYFSNDDSDKVSLEISLLSNRDGRQTIVDLTKTMAELTKSKELK 261
Query: 162 SHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSREL 221
+ D+ L+ K L P+PDL++ G L F W + +EF + + + +
Sbjct: 262 AEDITMRLMDKELTQLVGPEPDLLLYFGPSLDLQGFPPWHLRLTEFHWEQDN-NQVAYSI 320
Query: 222 FFHALNQYNLRDRRFGG 238
F L++Y+ G
Sbjct: 321 FIRGLHKYSNCKINVGK 337
>gi|74212759|dbj|BAE33349.1| unnamed protein product [Mus musculus]
Length = 330
Score = 48.4 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 62/191 (32%), Gaps = 40/191 (20%)
Query: 23 RW-AAARGLPRCAGHR----------KGIEVFNEIVAAAAEVGIKNLTIFAFS---INNW 68
RW A R L + H +V VGI ++++ N
Sbjct: 155 RWRADVRSLQKLPVHMGLLVTEEVQEPSFSDIASLVVWCMAVGISYISVYDHQGIFKRNN 214
Query: 69 RRPVSEI-SELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
R + EI + +L+ K +N D D + N
Sbjct: 215 SRLMDEILKQQQELLGQDCSKYSAEFANSN------------DKDDQDL----------N 252
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+ + + +I RA ++ Q + D+D L+ L + PDPDL+++
Sbjct: 253 CPSAVKVLSPEDGKADIVRAAQDFCQLVAQQQRKPTDLDVDLLGSLLSSHGFPDPDLVLK 312
Query: 188 TGGEK---RLS 195
G RLS
Sbjct: 313 FGPVAQHIRLS 323
>gi|255556087|ref|XP_002519078.1| conserved hypothetical protein [Ricinus communis]
gi|223541741|gb|EEF43289.1| conserved hypothetical protein [Ricinus communis]
Length = 243
Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 46/130 (35%), Gaps = 7/130 (5%)
Query: 106 RLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVC---- 161
L + I +D + + L A ++ I++A +F + +
Sbjct: 108 IERLPNAIQLEEAVEKDLPLDHKHMTLEFASVSDGKEAIAKAANLLFMNYMKSAKTNIGQ 167
Query: 162 SHDVDSSLIAKYLDTSDV--PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSR 219
+ + + + L T DPDL++ G + F W++ Y+E V +
Sbjct: 168 EEVITEAHMDEALRTLGYKGTDPDLLLVYGPVRCHLGFPAWRIRYTEIVHMGPL-KSMRY 226
Query: 220 ELFFHALNQY 229
A+ ++
Sbjct: 227 GSLIKAIYKF 236
>gi|39945156|ref|XP_362115.1| hypothetical protein MGG_04560 [Magnaporthe oryzae 70-15]
gi|145011358|gb|EDJ96014.1| hypothetical protein MGG_04560 [Magnaporthe oryzae 70-15]
Length = 325
Score = 48.0 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 38/237 (16%), Positives = 78/237 (32%), Gaps = 30/237 (12%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIE------VFNEIVAAAAEVGIKNLTIF 61
P H+ +I+ R L +G R G E +I A A GI L+++
Sbjct: 113 GRTPKHLSVIL----R------LEEDSG-RAGAELERLVNEVADIAAWCACAGIPKLSVY 161
Query: 62 AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
E + ++K + + + + +
Sbjct: 162 ------------EKTGILKGYLQKTHRAVSAKLASYYGDSHPALIVKAPHTPSIESDPSA 209
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
+ + + + + RD + K + + ++ + D++ +I L S + +
Sbjct: 210 ESGSGDKHIIVLLLSAEDGRDSLVDLTKTLTEMAQAEKLSPTDINMDVIDTELTESVMDE 269
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PDL+I G L + WQ+ +E + ++F L Y+ R G
Sbjct: 270 PDLLIHFGPHVVLDGYPPWQIRLTEIYHAQDN-NSVGYQVFLRGLQNYSRAQFRNGK 325
>gi|309364865|emb|CAP23425.2| hypothetical protein CBG_03250 [Caenorhabditis briggsae AF16]
Length = 243
Score = 47.6 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 37/238 (15%), Positives = 84/238 (35%), Gaps = 50/238 (21%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ + + +R + +I+ + GI+ L+++ +
Sbjct: 48 RIPAHLAVC------FTESRLIDLTE--------VIQIMDSCVAAGIRQLSLYDP----F 89
Query: 69 RRPVSEISELVKLIKSFLK-------KGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
VS+I ++ + + F + K +S N++V V+ + + L + +
Sbjct: 90 GELVSQIGQIEQACRLFTRADLFCDGKRLHSSGLTNLQVNVLSRK--MGKSALVEACKMK 147
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS-DVP 180
++ +T + F ++ ++K L+ +
Sbjct: 148 FFSKRHTAHKSILCFQLC--------------------REEDEITVDRVSKTLEDKFHLS 187
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
DPD +++ G L + W + +EF+ P P SR + ++ RD R G
Sbjct: 188 DPDFLLQVGNVPTLCGYPPWNLRITEFLQTPRL-P-CSRRALDCCVEAFSQRDIRVGK 243
>gi|151941813|gb|EDN60169.1| nuclear undecaprenyl pyrophosphate synthase [Saccharomyces
cerevisiae YJM789]
gi|190405187|gb|EDV08454.1| prenyltransferase [Saccharomyces cerevisiae RM11-1a]
gi|207347128|gb|EDZ73415.1| YDL193Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270067|gb|EEU05312.1| Nus1p [Saccharomyces cerevisiae JAY291]
gi|259145051|emb|CAY78315.1| Nus1p [Saccharomyces cerevisiae EC1118]
Length = 375
Score = 47.6 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 40/109 (36%), Gaps = 1/109 (0%)
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ + + + N R+ I K + + + D+ L+ L P+PDL
Sbjct: 263 KDKIAIEISLLSNRDGRETIVDLTKTMAELCAVNELSVSDITMDLVDSELKQLVGPEPDL 322
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
++ G L F W + +EF + + + +F L QY
Sbjct: 323 LLYFGPSLDLQGFPPWHIRLTEFYWEKDN-NEVIYSVFIRGLRQYAGCK 370
>gi|6320008|ref|NP_010088.1| Nus1p [Saccharomyces cerevisiae S288c]
gi|74676514|sp|Q12063|UPPS_YEAST RecName: Full=Probable undecaprenyl pyrophosphate synthase;
Short=UPP synthase; AltName:
Full=Di-trans,poly-cis-decaprenylcistransferase;
AltName: Full=Nuclear undecaprenyl pyrophosphate
synthase 1; AltName: Full=Undecaprenyl diphosphate
synthase; Short=UDS
gi|1004302|emb|CAA58254.1| D1239 [Saccharomyces cerevisiae]
gi|1431316|emb|CAA98770.1| unnamed protein product [Saccharomyces cerevisiae]
gi|285810846|tpg|DAA11670.1| TPA: Nus1p [Saccharomyces cerevisiae S288c]
Length = 375
Score = 47.6 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 40/109 (36%), Gaps = 1/109 (0%)
Query: 125 RLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDL 184
+ + + + N R+ I K + + + D+ L+ L P+PDL
Sbjct: 263 KDKIAIEISLLSNRDGRETIVDLTKTMAELCAVNELSVSDITMDLVDSELKQLVGPEPDL 322
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRD 233
++ G L F W + +EF + + + +F L QY
Sbjct: 323 LLYFGPSLDLQGFPPWHIRLTEFYWEKDN-NEVIYSVFIRGLRQYAGCK 370
>gi|302771307|ref|XP_002969072.1| hypothetical protein SELMODRAFT_4954 [Selaginella moellendorffii]
gi|300163577|gb|EFJ30188.1| hypothetical protein SELMODRAFT_4954 [Selaginella moellendorffii]
Length = 71
Score = 47.6 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 35/71 (49%)
Query: 97 NIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIE 156
KVR IG+ L + + EA T + GL + Y SR+++ + + I ++E
Sbjct: 1 GFKVRCIGDVSLLPSSLQARIAEAHVMTSNSKGLKFILPTAYGSREDVVQDCRRIAFEVE 60
Query: 157 SGSVCSHDVDS 167
G+V + D+D
Sbjct: 61 CGAVRASDIDQ 71
>gi|268532544|ref|XP_002631400.1| Hypothetical protein CBG03250 [Caenorhabditis briggsae]
Length = 226
Score = 47.6 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 35/231 (15%), Positives = 80/231 (34%), Gaps = 53/231 (22%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P H+ + + +R + +I+ + GI+ L+++ +
Sbjct: 48 RIPAHLAVC------FTESRLIDLTE--------VIQIMDSCVAAGIRQLSLYDP----F 89
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
VS+I ++ + + F + L + ++ G T
Sbjct: 90 GELVSQIGQIEQACRLFTR---ADLFCDGKRLHSSGL----------------------T 124
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS-DVPDPDLIIR 187
L + + + + A K + ++ ++ ++K L+ + DPD +++
Sbjct: 125 NLQVNVLSRKMGKSALVEACKMLCRE-------EDEITVDRVSKTLEDKFHLSDPDFLLQ 177
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
G L + W + +EF+ P P SR + ++ RD R G
Sbjct: 178 VGNVPTLCGYPPWNLRITEFLQTPRL-P-CSRRALDCCVEAFSQRDIRVGK 226
>gi|149001625|ref|ZP_01826598.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
SP14-BS69]
gi|147760083|gb|EDK67072.1| undecaprenyl diphosphate synthase [Streptococcus pneumoniae
SP14-BS69]
Length = 54
Score = 47.6 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 14/21 (66%), Positives = 16/21 (76%)
Query: 6 MSSSPPDHIGIIMDGNGRWAA 26
+ + P HIGIIMDGNGRWA
Sbjct: 15 VPTQVPAHIGIIMDGNGRWAK 35
>gi|116180328|ref|XP_001220013.1| hypothetical protein CHGG_00792 [Chaetomium globosum CBS 148.51]
gi|88185089|gb|EAQ92557.1| hypothetical protein CHGG_00792 [Chaetomium globosum CBS 148.51]
Length = 258
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 43/111 (38%), Gaps = 1/111 (0%)
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
+++ + RD + K + + + + D+ L+ L S + +PDL+I
Sbjct: 149 KHISIVLISAEDGRDSMVDLTKTLAEMSQRKKLNPADITPELVDAELTESVMSEPDLLIL 208
Query: 188 TGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
L+ + WQ+ +E + + ++F+ L + R G
Sbjct: 209 FSPHVELAGYPPWQIRLTEIFHVRDN-QGVGYQVFYKGLRNFAEAQMRKGR 258
>gi|256077806|ref|XP_002575191.1| hypothetical protein [Schistosoma mansoni]
gi|238660422|emb|CAZ31424.1| expressed protein [Schistosoma mansoni]
Length = 233
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 42/232 (18%), Positives = 77/232 (33%), Gaps = 49/232 (21%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HI + + +V + +G+ L++
Sbjct: 49 KIPQHISFV---------------IFEEIFSAQDIANLVIWCSAIGVSYLSLSDM----- 88
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNN-IKVRVIGNRLSLDDDILCVLKEAEDQTRLN 127
I L ++ F+K+ YS+KKNN IK VI L +
Sbjct: 89 ---KGNILHLRDSVEQFIKEKDYSVKKNNGIKSSVI--YSPLSRVL-------------- 129
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD-TSDVPDPDLII 186
+ + + D+I ++ + S + + + + + + VPD DL I
Sbjct: 130 SKITVNYLNCDDGFDQICQSAR-------YLSTSTSTLTDERVNQTITELTKVPDVDLTI 182
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
G S L WQ +SEF+ P F + ++ + +R+G
Sbjct: 183 HCGLSSSFSGLLPWQSRFSEFIQCPSV-RGLRLSDFRQIVCRFGMVKQRWGR 233
>gi|330956444|gb|EGH56704.1| sigma-54 factor, interaction region [Pseudomonas syringae Cit 7]
Length = 47
Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 17/24 (70%), Positives = 20/24 (83%)
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLW 200
D+P PDL IRTGGE R+S+FLLW
Sbjct: 24 GDLPLPDLCIRTGGEHRISNFLLW 47
>gi|67903782|ref|XP_682147.1| hypothetical protein AN8878.2 [Aspergillus nidulans FGSC A4]
gi|40744936|gb|EAA64092.1| hypothetical protein AN8878.2 [Aspergillus nidulans FGSC A4]
gi|259486692|tpe|CBF84753.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 353
Score = 46.9 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 37/233 (15%), Positives = 74/233 (31%), Gaps = 52/233 (22%)
Query: 40 IEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIK 99
++ E+V+ +A GI L+++ E S L+K L + N
Sbjct: 139 MDEVAELVSWSASAGIPVLSVY------------EKSGLLKSCIPMLHQVI-----TNKL 181
Query: 100 VRVIGNRLSLDDDILCVLKEAEDQTR-----LNTGLNLFIAFNYSSRDEISRAIKNIFQD 154
G+ L +TR L + + ++ + K + +
Sbjct: 182 SSYFGSLQQ-PTLQLFAPHHPIYKTRPAGDAAKNSLVVLLLSATDGQETLVDLTKTLAEM 240
Query: 155 IESGSVCSHDVDSSLIAKYLD------------TSDV----------PDPDLIIRTGGEK 192
++G + D+ L+ + T++ P+PDL++ G
Sbjct: 241 SQNGKLSPDDITMELVDAEISEITTQPSQDVAPTANDHKVSKPLQVKPEPDLLLVFGPSL 300
Query: 193 RLSDFLLWQVAYSEFVFIPEYWPDFS-------RELFFHALNQYNLRDRRFGG 238
+L+ + W + +E F+ + F L Y RFG
Sbjct: 301 KLNGYPPWHIRLTEMYCTGVNSDGFTGYGDNVEYQGFLRGLWHYAGAQMRFGR 353
>gi|307206106|gb|EFN84186.1| Nogo-B receptor [Harpegnathos saltator]
Length = 59
Score = 46.5 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+PDPDL + G L W +EF+ +P + + + F + L +YN +R+G
Sbjct: 1 MPDPDLALIYGYSCSTHGLLPWHTRTTEFLMLP-LYVSITVKDFAYILERYNKCVQRYGK 59
>gi|254565697|ref|XP_002489959.1| Prenyltransferase, required for cell viability [Pichia pastoris
GS115]
gi|238029755|emb|CAY67678.1| Prenyltransferase, required for cell viability [Pichia pastoris
GS115]
gi|328350370|emb|CCA36770.1| hypothetical protein PP7435_Chr1-0621 [Pichia pastoris CBS 7435]
Length = 342
Score = 46.1 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 41/236 (17%), Positives = 69/236 (29%), Gaps = 30/236 (12%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFN----EIVAAAAEVGIKNLTIFAF 63
+ P I +I+ L GI E+ A GIK L+I+ +
Sbjct: 122 NKIPKRISVIL----------NLKPEETENGGISGLISDSSEVCAWVVASGIKYLSIYEY 171
Query: 64 SIN--NWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
N P S KL + + I + ++
Sbjct: 172 GGELKN-NIPELRRSVYKKLAVYYGTDNVPTFSIKVPHANAI----YYGASDQDIDQQRY 226
Query: 122 DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPD 181
T L + + N R I K + + + D+ I L +
Sbjct: 227 KNTSYKPILQIVLLSNVDGRATIVDLTKVMADLTTTNEISPKDITVKFIDDELKQLVGEE 286
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYW-PD---FSRELFFHALNQYNLRD 233
PDL+I L + W + E YW PD + ++ AL +++
Sbjct: 287 PDLLILFQPYLNLQSYPPWHIRLCEI-----YWEPDNDAVTYPVYLRALQKFSTCK 337
>gi|302764646|ref|XP_002965744.1| hypothetical protein SELMODRAFT_406752 [Selaginella moellendorffii]
gi|300166558|gb|EFJ33164.1| hypothetical protein SELMODRAFT_406752 [Selaginella moellendorffii]
Length = 252
Score = 46.1 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 38/234 (16%), Positives = 88/234 (37%), Gaps = 37/234 (15%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P + I++DG RKG + E++ A GI+ + ++
Sbjct: 48 PRVVAIVVDG-------------ESARKGRDEIVELLVFLAAAGIRQVALY--------- 85
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
++ ++K ++L+K S R + + + + + +T+ +
Sbjct: 86 ---DMEGILKRYGTYLEKRVVSSTWK----RQLKHDFHFSNGVDPFPRSNPIRTKSEPRM 138
Query: 131 NLFIAFNYSSRDEISRAIKNIFQD-----IESGSVCSHDVDSSLIAKYLD--TSDVPDPD 183
+ + +D I+ A + I D + + + + + + L PDP+
Sbjct: 139 VVELLSMSDGKDAIAEAARRIHDDLRGSSRQDQLERINSLTETDLNESLKQIGRWKPDPE 198
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
L++ G + F W++ +E +++ E + +AL Y+ R R+G
Sbjct: 199 LMLVFGKINSVQGFPPWRIKLTEIIYMGELRRNIDSS-LSYALQAYSGRTHRYG 251
>gi|215410703|ref|ZP_03419511.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis 94_M4241A]
Length = 77
Score = 46.1 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 1 MVASMMSSSPPDHIGIIMDGNGRWAAARG 29
M+ + + P HI ++ DGN RWA + G
Sbjct: 26 MLGPPRNPTCPRHIAVLCDGNRRWARSAG 54
>gi|193204531|ref|NP_495928.2| hypothetical protein F37B12.3 [Caenorhabditis elegans]
gi|172052291|emb|CAA90956.2| C. elegans protein F37B12.3, confirmed by transcript evidence
[Caenorhabditis elegans]
Length = 226
Score = 45.7 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Query: 155 IESGSVCSHDVDSSLIAKYLDTS-DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEY 213
++ + ++K L+ + DPD ++R G L + W + +EF+ P
Sbjct: 144 CKTLCRDDEPITVEKVSKILEEKFHLSDPDFLLRIGNVPTLCGYPPWNLRITEFLQSPRL 203
Query: 214 WPDFSRELFFHALNQYNLRDRRFGG 238
P SR + + ++ RD R G
Sbjct: 204 -P-CSRRGLDYCIEAFSQRDIRVGK 226
>gi|91091696|ref|XP_972659.1| PREDICTED: similar to AGAP000402-PA [Tribolium castaneum]
gi|270001062|gb|EEZ97509.1| hypothetical protein TcasGA2_TC011353 [Tribolium castaneum]
Length = 235
Score = 45.3 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
+ PDPDL + G L + WQ+ +EF+ + + + + E F H L ++N ++R+G
Sbjct: 176 EFPDPDLGVCCGKTFSLYGYPPWQIRVTEFLTLQTH-HNITLETFIHLLYRFNKCEQRYG 234
Query: 238 G 238
Sbjct: 235 K 235
>gi|6062592|gb|AAF02905.1|AF065605_2 BC2-ORF2/B [Giardia intestinalis]
Length = 373
Score = 45.3 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 41/240 (17%), Positives = 77/240 (32%), Gaps = 55/240 (22%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEV--FNEIVAAAAEVGIKNLTIFAFSINN 67
P HI I+ DG GR + + + + A I+ ++ + + +
Sbjct: 19 LPRHIAIVADGTGR--------TSFQYNYNLFPCCLLQHIRLFASFKIQYISFVLYGLFS 70
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVR--VIGNRLSLDD-----DILCVLKEA 120
S+ +K L L+K + + V G+ + L ++
Sbjct: 71 PNTSSDSRSKNFATMKDALSGLLQYLEKADFLLHIAVYGSYHHSRPDTTFLECLELMGRI 130
Query: 121 EDQTRLNT---------GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIA 171
+ TR + + L I YSS + + Q+ + + + +D I+
Sbjct: 131 NEFTRRRSEEISSEQVYSITLSIFVCYSSLSSLHDVSVKVCQENATEHMINSTIDPYSIS 190
Query: 172 KYLDTSD-----------------------------VPDPDLIIRTGGEKRLSDFLLWQV 202
L +P PD+ RT GEKR+ D LW++
Sbjct: 191 LALSCYGIKPYPGITDDVYMLGMTPSPATAKWVVSPLPPPDIFARTSGEKRIGDCFLWEI 250
>gi|156848057|ref|XP_001646911.1| hypothetical protein Kpol_2000p17 [Vanderwaltozyma polyspora DSM
70294]
gi|156117593|gb|EDO19053.1| hypothetical protein Kpol_2000p17 [Vanderwaltozyma polyspora DSM
70294]
Length = 349
Score = 45.3 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 44/238 (18%), Positives = 78/238 (32%), Gaps = 22/238 (9%)
Query: 5 MMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ S P + I+D G G + + +EIV GIK+L ++ F
Sbjct: 130 LKLSKVPKRLAAILD-----MKPIG-EVGGGVKGIVNDASEIVCWTVSAGIKHLMLYDFD 183
Query: 65 ---INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAE 121
N + L I L F N +R+ L+ +
Sbjct: 184 GVLKTN-------VQSLRGEIAEKLSLYFGPTDTPNFAIRI----PHLNKVYYNGADDEN 232
Query: 122 DQTRLNTGLN-LFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVP 180
+ + + + N R+ I + + + S + D+ LI L
Sbjct: 233 YNAKSEKVIIEISLLSNRDGRETIVDLTRTMSELCLSHDLELSDITMKLIDTELTQLVGH 292
Query: 181 DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+PDL++ G L F W + +EF + + S +F L +Y+ G
Sbjct: 293 EPDLLLYFGPALDLQGFPPWHIRLTEFHWEADN-DQVSYLVFIRGLQKYSTCKINVGK 349
>gi|294655431|ref|XP_457566.2| DEHA2B14300p [Debaryomyces hansenii CBS767]
gi|199429951|emb|CAG85577.2| DEHA2B14300p [Debaryomyces hansenii]
Length = 352
Score = 45.3 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 39/243 (16%), Positives = 75/243 (30%), Gaps = 47/243 (19%)
Query: 8 SSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFN----EIVAAAAEVGIKNLTIFAF 63
+ P + I+D L G+E E+ A + GI L+I+ +
Sbjct: 135 TKLPKRVSCILD----------LKDDDDENGGVEGLINDISELTAWSISAGIPVLSIYEY 184
Query: 64 SINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIK-VRVIGNRLSLDDDILCVLKEAED 122
+ ++ L + +K + V S+ + +
Sbjct: 185 T-------------------GIVQHHLPELCRYIVKNLSVYFGTESIPVFSIRIPHSNTV 225
Query: 123 QTRLNTGLNLFIAFN------------YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLI 170
N + + I K++ + + + D+ LI
Sbjct: 226 IYSNNLQQSPTFEVPASIDLEISLLSKIDGKPTIIELTKSMCELAVNKELSIKDITIDLI 285
Query: 171 AKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYN 230
+ L +PDL+I G L D+ W + SE +F D + +F AL +Y+
Sbjct: 286 DEELIELVGVEPDLLICFGPSLDLQDYPPWHIRLSE-IFWEIDNQDVNYSIFIRALQKYS 344
Query: 231 LRD 233
Sbjct: 345 NCK 347
>gi|306818304|ref|ZP_07452033.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
gi|304648949|gb|EFM46245.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
Length = 40
Score = 44.9 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 155 IESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEK 192
+ G + + +V +A+ L DVPD DL+IRT GE+
Sbjct: 1 MARGELRAENVTEKTLARELYLPDVPDVDLLIRTSGER 38
>gi|306818305|ref|ZP_07452034.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
gi|304648950|gb|EFM46246.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
Length = 82
Score = 44.9 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 16/23 (69%), Positives = 17/23 (73%)
Query: 16 IIMDGNGRWAAARGLPRCAGHRK 38
IIMDGNGRWA A+GL R AG
Sbjct: 3 IIMDGNGRWANAQGLNRTAGREA 25
>gi|328859523|gb|EGG08632.1| hypothetical protein MELLADRAFT_77338 [Melampsora larici-populina
98AG31]
Length = 316
Score = 44.5 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 46/115 (40%), Gaps = 6/115 (5%)
Query: 130 LNLFIAFNYSSRDEISRAIKNIF--QDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIR 187
L L I + + + + + S+ +D++ +I + ++ + PDLI+
Sbjct: 202 LRLNILTRQHGHAHLVQVARQLVTSMRNKDSSLSLNDLNVKIIGDQICSTSIGPPDLIMV 261
Query: 188 TGGEK-RLSDFLLWQVAYSEFVFIPEY--WP-DFSRELFFHALNQYNLRDRRFGG 238
GG R F WQ+ +E Y P + F A+ Y+ ++R G
Sbjct: 262 LGGRSLRFRGFPPWQLNLAEIYHGRSYSILPYQVTYREFMAAMRVYSDCEQRKGA 316
>gi|134058255|emb|CAK38447.1| unnamed protein product [Aspergillus niger]
Length = 333
Score = 44.2 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 36/107 (33%), Gaps = 10/107 (9%)
Query: 139 SSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFL 198
R+ K + + +SG + D+ L+ + P+PDL++ G +L +
Sbjct: 230 DGRETFVDLTKTLAEMSQSGKLSPEDITMELVDAEIM---KPEPDLLLVFGSFLKLDGYP 286
Query: 199 LWQVAYSEFVFIPEYWPDFSREL-------FFHALNQYNLRDRRFGG 238
W + +E + F L Y RFG
Sbjct: 287 PWHIRLTEMYCTGGRNSGITNSDEAVEYHGFLRGLWHYAGAQMRFGR 333
>gi|194759198|ref|XP_001961836.1| GF15168 [Drosophila ananassae]
gi|190615533|gb|EDV31057.1| GF15168 [Drosophila ananassae]
Length = 282
Score = 43.8 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 39/206 (18%), Positives = 79/206 (38%), Gaps = 20/206 (9%)
Query: 43 FNEIVAAAAEVGIKNLTIFAFSINNWRRPV-SEISELVKLIKSFLKKGFYSLKKNNIKVR 101
I A EVG+++++++ RRP EL +L + +G S K K +
Sbjct: 85 LRRIFGFALEVGVQHVSVYD------RRPKGDGYVELAELCQPSNDEGTGSHFKWPAKPK 138
Query: 102 VIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDI------ 155
+ + A D + + L L+ I+ + ++++
Sbjct: 139 KPESAPINGQKTNGYVNGAGDNSSCSNQLQLYQISAADGHALIADVCRELYEERNSEVVQ 198
Query: 156 ----ESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIP 211
+ + ++S L + + P+PDL I + L W V ++EF
Sbjct: 199 NLLSQKREALTEQINSMLTKRLGYVA--PEPDLGIIFARQTCTYGVLPWHVRFTEFH-TH 255
Query: 212 EYWPDFSRELFFHALNQYNLRDRRFG 237
F+ E F + L++Y+ ++R+G
Sbjct: 256 PSGRYFNVESFANILSKYSRCEQRWG 281
>gi|255081981|ref|XP_002508209.1| predicted protein [Micromonas sp. RCC299]
gi|226523485|gb|ACO69467.1| predicted protein [Micromonas sp. RCC299]
Length = 299
Score = 43.8 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 40/102 (39%), Gaps = 4/102 (3%)
Query: 140 SRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD--VPDPDLIIRTGGEKRLSDF 197
RDE +D + S + + +++ + +P DL I G S +
Sbjct: 199 WRDEKQDRDGKQDRDGVAPSGSDDSITPRELEAWMERTGRLLPAVDLAIVFGKHFHASAY 258
Query: 198 LLWQVAYSEFVFIPE-YWPDFSRELFFHALNQYNLRDRRFGG 238
WQ+ +E + W F+R+ L +Y+ +RFG
Sbjct: 259 PPWQLHRAEIYHVDRGLW-GFTRKGLRRVLRRYSKTAQRFGK 299
>gi|241596080|ref|XP_002404519.1| hypothetical protein IscW_ISCW008076 [Ixodes scapularis]
gi|215500425|gb|EEC09919.1| hypothetical protein IscW_ISCW008076 [Ixodes scapularis]
Length = 112
Score = 43.4 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 9/66 (13%)
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEF----VFIPEYWPDFSRELFFHALNQYNLR 232
+ +PDP++I R G L + W V +SE F L Y+
Sbjct: 52 NGMPDPEIIFRFGNSNALLGYPPWHVNHSEILDLGYHRDVL-----PSEFVEVLEIYSKI 106
Query: 233 DRRFGG 238
++R+G
Sbjct: 107 EKRYGK 112
>gi|195159606|ref|XP_002020669.1| GL15601 [Drosophila persimilis]
gi|194117619|gb|EDW39662.1| GL15601 [Drosophila persimilis]
Length = 523
Score = 43.4 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPD--FSRELFFHALNQYNLRDRR 235
D PDPDL I + + W V ++EF P D F+ E F L +Y+ ++R
Sbjct: 464 DAPDPDLGIIFARQTCTYGLMPWHVRFTEFHTHPS---DRYFNVESFTKVLYRYSRCEQR 520
Query: 236 FGG 238
+G
Sbjct: 521 WGK 523
>gi|253744885|gb|EET01022.1| BC2 protein [Giardia intestinalis ATCC 50581]
Length = 373
Score = 43.4 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 41/240 (17%), Positives = 77/240 (32%), Gaps = 55/240 (22%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEV--FNEIVAAAAEVGIKNLTIFAFSINN 67
P HI I+ DG GR + + + + A I+ ++ + + +
Sbjct: 19 LPRHIAIVADGTGR--------TSFQYNYNLFPCCLLQHIRLFASFKIQYISFVLYGLFS 70
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVR--VIGNRLSLDD-----DILCVLKEA 120
S+ +K L L+K + + V G+ + L ++
Sbjct: 71 PNTSSDSRSKNFATMKDALSGLLQYLEKADFLLHIAVYGSYHHSRPDTTFLECLELMGRI 130
Query: 121 EDQTRLNT---------GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIA 171
+ TR + + L I YSS + + Q+ + + + +D I+
Sbjct: 131 NEFTRRRSEEISSEQVYSITLSIFVCYSSLSSLHDVSVKVCQENTTEHMINSTIDPYSIS 190
Query: 172 KYLDTSD-----------------------------VPDPDLIIRTGGEKRLSDFLLWQV 202
L +P PD+ RT GEKR+ D LW++
Sbjct: 191 FALSCYGIKPYPGITDDVYMLGMTPSPATAKWVASPLPPPDIFARTSGEKRIGDCFLWEI 250
>gi|316969735|gb|EFV53790.1| hypothetical protein Tsp_08749 [Trichinella spiralis]
Length = 297
Score = 43.0 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 65/199 (32%), Gaps = 24/199 (12%)
Query: 41 EVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKV 100
+ +V+ A +GI ++T++ + + L K
Sbjct: 122 DRLVLLVSKCAMLGICHVTLYRMRL------------WNSTERYKLIYQVKKKLNYCTKS 169
Query: 101 RVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSV 160
+ + + + I S R I +A+K
Sbjct: 170 EWL---------LQDSMGKFTLYNENGQRFCCSILDIRSGRFSIVQALKEYSHKQACCEE 220
Query: 161 CSHDVDSSLIAKYLDT-SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSR 219
+ D + + +LD + D D ++ GG ++ F + ++EF +P D
Sbjct: 221 VTFD-ERQFVETFLDGQHCLEDVDYLLFFGGVVTVAGFPPLSLRWTEFGALPPL-KDVQE 278
Query: 220 ELFFHALNQYNLRDRRFGG 238
+L+ + L+++RFG
Sbjct: 279 RHLLESLHSFALKEQRFGK 297
>gi|308510076|ref|XP_003117221.1| hypothetical protein CRE_02303 [Caenorhabditis remanei]
gi|308242135|gb|EFO86087.1| hypothetical protein CRE_02303 [Caenorhabditis remanei]
Length = 226
Score = 42.6 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Query: 155 IESGSVCSHDVDSSLIAKYLDTS-DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEY 213
++ + + ++K L+ + DPD +++ G L + W + +EF+ P
Sbjct: 144 CKTLCREDEKITTERVSKILEEKFHLSDPDFLLQIGSVPTLCGYPPWNLRITEFLQSPRL 203
Query: 214 WPDFSRELFFHALNQYNLRDRRFGG 238
P SR + + ++ RD R G
Sbjct: 204 -P-CSRRALDYCVEAFSQRDIRVGK 226
>gi|322798834|gb|EFZ20381.1| hypothetical protein SINV_15146 [Solenopsis invicta]
Length = 89
Score = 42.6 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 25/67 (37%)
Query: 88 KGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRA 147
+ + +++RVIGN + DI + A +T N + A +Y+ + A
Sbjct: 15 ENTDKMVDAGVRIRVIGNLSFIRKDIRESIARAMMRTEENNKIIFNFALSYTRNKDELAA 74
Query: 148 IKNIFQD 154
Sbjct: 75 KIKELTQ 81
>gi|66824333|ref|XP_645521.1| hypothetical protein DDB_G0271830 [Dictyostelium discoideum AX4]
gi|60473664|gb|EAL71605.1| hypothetical protein DDB_G0271830 [Dictyostelium discoideum AX4]
Length = 354
Score = 42.6 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 50/251 (19%), Positives = 93/251 (37%), Gaps = 31/251 (12%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
S P H+ +I+ N R + L ++I+ + VGIK +TIF +N
Sbjct: 114 STPKHLALIL--NHR-DQIKSLTNTTETINFYNKISDILIWSVIVGIKRITIF----DNH 166
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAED------ 122
IS L+ + +K NN N + +++ K+
Sbjct: 167 GSLKKNISVFQNLLDNKIKPFNNINTSNNKNNTNNNNNNNNNNNNNNNNKQTIYKFNWLN 226
Query: 123 -----------QTRLNTG-LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLI 170
T +N+ LN+ I + E+ K +D + ++ S +
Sbjct: 227 NLKNITPIGGDMTDINSRILNVSIVTVEDGKQELINITKKYIKDSKLNQDLI--LNESYV 284
Query: 171 AKYLDT---SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALN 227
L + + +P++ + + S FL W + +EF+ + ++ F E F H L
Sbjct: 285 NSNLPSFIGGNDFEPEVALDFSDKHLFSGFLPWHIKLTEFIKMD-HFNQFYLERFHHFLK 343
Query: 228 QYNLRDRRFGG 238
+YN +R G
Sbjct: 344 KYNSVQKRCGK 354
>gi|45187965|ref|NP_984188.1| ADR092Wp [Ashbya gossypii ATCC 10895]
gi|44982749|gb|AAS52012.1| ADR092Wp [Ashbya gossypii ATCC 10895]
Length = 355
Score = 42.2 bits (98), Expect = 0.059, Method: Composition-based stats.
Identities = 31/197 (15%), Positives = 67/197 (34%), Gaps = 9/197 (4%)
Query: 45 EIVAAAAEVGIKNLTIF---AFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVR 101
+V GIK+L+++ N + + L + + +
Sbjct: 165 NVVCWTVSAGIKHLSLYDHDGVLKANVHQFRQGV--YDTLARYYGPNNVPKFAIRIPHLN 222
Query: 102 VIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVC 161
+ + +D V +E +T + + + R+ I K + +SG +
Sbjct: 223 TV--YFNKPEDETQVAEEPSRET-HKVAIEVSLLSVRDGRETIVDLTKAMADLCKSGDLK 279
Query: 162 SHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSREL 221
++ L+ L +PDL++ G L + W + +EF + + + +
Sbjct: 280 LEEITMKLVDTELTQLVGVEPDLLLYFGPHLDLQGYPPWHIRLTEFYWEEDN-DEVMYSV 338
Query: 222 FFHALNQYNLRDRRFGG 238
F L QY+ G
Sbjct: 339 FIRGLIQYSTCKVNLGK 355
>gi|195385839|ref|XP_002051612.1| GJ11212 [Drosophila virilis]
gi|194148069|gb|EDW63767.1| GJ11212 [Drosophila virilis]
Length = 277
Score = 42.2 bits (98), Expect = 0.061, Method: Composition-based stats.
Identities = 20/88 (22%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
Query: 151 IFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFI 210
Q++ D ++ K L + VP+P+L I + L W V ++EF
Sbjct: 192 QVQEMLKQRQSLTDGIDGMLNKRLGFA-VPEPELGIIFSRQTCTYGLLPWHVRFTEFH-T 249
Query: 211 PEYWPDFSRELFFHALNQYNLRDRRFGG 238
F + F L +Y ++R+G
Sbjct: 250 HRSGRYFDAKSFAKVLYKYARCEQRWGK 277
>gi|169835794|ref|ZP_02868982.1| hypothetical protein cdivTM_01531 [candidate division TM7
single-cell isolate TM7a]
Length = 60
Score = 42.2 bits (98), Expect = 0.066, Method: Composition-based stats.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 198 LLWQVAYSEFVFIPEYWPDFSRELFFHALN 227
+LW+ AYSEF+FI + WPD ++E + LN
Sbjct: 1 MLWRAAYSEFMFIDKPWPDMTKEDVYLILN 30
>gi|115451335|ref|NP_001049268.1| Os03g0197000 [Oryza sativa Japonica Group]
gi|108706665|gb|ABF94460.1| expressed protein [Oryza sativa Japonica Group]
gi|113547739|dbj|BAF11182.1| Os03g0197000 [Oryza sativa Japonica Group]
gi|215678692|dbj|BAG92347.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 252
Score = 42.2 bits (98), Expect = 0.066, Method: Composition-based stats.
Identities = 30/234 (12%), Positives = 77/234 (32%), Gaps = 49/234 (20%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ +++D R A + N+++ + VG+K + ++
Sbjct: 61 KHLAVVVD--SREAKN------------VAKINQLLCWLSNVGVKYVCLY---------- 96
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
+ K ++ G+R L V + T + +
Sbjct: 97 --------DIDGVLKKTFAPAMN---------GSRYGNSGKYLDVGANTKALTCCHKEMT 139
Query: 132 LFIAFNYSSRDEISRAI---KNIFQDIESGSVCSHDV--DSSLIAKYLDT--SDVPDPDL 184
+ +D I++A + + + + ++ + ++ L P+PDL
Sbjct: 140 IECISGSDGKDGIAKAASLLCSTCVNGNRNTCGNGEIVFTEADMSGALKAIGCGGPEPDL 199
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
++ G + F W++ Y+E + + A +++ + + FG
Sbjct: 200 LLVYGPARCHLGFPAWRLRYTEIMHMGPL-NSMKYGAIVKAFYKFSKKYQNFGK 252
>gi|108706667|gb|ABF94462.1| expressed protein [Oryza sativa Japonica Group]
gi|108706668|gb|ABF94463.1| expressed protein [Oryza sativa Japonica Group]
Length = 249
Score = 42.2 bits (98), Expect = 0.066, Method: Composition-based stats.
Identities = 30/234 (12%), Positives = 77/234 (32%), Gaps = 49/234 (20%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ +++D R A + N+++ + VG+K + ++
Sbjct: 58 KHLAVVVD--SREAKN------------VAKINQLLCWLSNVGVKYVCLY---------- 93
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
+ K ++ G+R L V + T + +
Sbjct: 94 --------DIDGVLKKTFAPAMN---------GSRYGNSGKYLDVGANTKALTCCHKEMT 136
Query: 132 LFIAFNYSSRDEISRAI---KNIFQDIESGSVCSHDV--DSSLIAKYLDT--SDVPDPDL 184
+ +D I++A + + + + ++ + ++ L P+PDL
Sbjct: 137 IECISGSDGKDGIAKAASLLCSTCVNGNRNTCGNGEIVFTEADMSGALKAIGCGGPEPDL 196
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
++ G + F W++ Y+E + + A +++ + + FG
Sbjct: 197 LLVYGPARCHLGFPAWRLRYTEIMHMGPL-NSMKYGAIVKAFYKFSKKYQNFGK 249
>gi|108706666|gb|ABF94461.1| expressed protein [Oryza sativa Japonica Group]
Length = 256
Score = 42.2 bits (98), Expect = 0.066, Method: Composition-based stats.
Identities = 30/234 (12%), Positives = 77/234 (32%), Gaps = 49/234 (20%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ +++D R A + N+++ + VG+K + ++
Sbjct: 65 KHLAVVVD--SREAKN------------VAKINQLLCWLSNVGVKYVCLY---------- 100
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
+ K ++ G+R L V + T + +
Sbjct: 101 --------DIDGVLKKTFAPAMN---------GSRYGNSGKYLDVGANTKALTCCHKEMT 143
Query: 132 LFIAFNYSSRDEISRAI---KNIFQDIESGSVCSHDV--DSSLIAKYLDT--SDVPDPDL 184
+ +D I++A + + + + ++ + ++ L P+PDL
Sbjct: 144 IECISGSDGKDGIAKAASLLCSTCVNGNRNTCGNGEIVFTEADMSGALKAIGCGGPEPDL 203
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
++ G + F W++ Y+E + + A +++ + + FG
Sbjct: 204 LLVYGPARCHLGFPAWRLRYTEIMHMGPL-NSMKYGAIVKAFYKFSKKYQNFGK 256
>gi|195619446|gb|ACG31553.1| hypothetical protein [Zea mays]
Length = 273
Score = 41.8 bits (97), Expect = 0.090, Method: Composition-based stats.
Identities = 25/208 (12%), Positives = 65/208 (31%), Gaps = 35/208 (16%)
Query: 38 KGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNN 97
K E ++ + +G+K + ++ + + + + + + +
Sbjct: 94 KSTEKVKRLLRWLSSMGVKYVCLY---------DIEGVLKKSFEPAVNVSRDRTAGEHFG 144
Query: 98 IKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAI-----KNIF 152
I + D+ C +E + ++ I++A
Sbjct: 145 IGANI--------KDLHCSQREMM----------IDCLSGSDGKEGIAKAASLLCSTYFN 186
Query: 153 QDIESGSVCSHDVDSSLIAKYLDT--SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFI 210
D + +A L P+PDL++ G + F W++ Y+E +++
Sbjct: 187 GDTHGDGKRKPAFTEADMAAALKAVGCGGPEPDLLLMYGPARCHLGFPAWRLRYTEIMYM 246
Query: 211 PEYWPDFSRELFFHALNQYNLRDRRFGG 238
AL ++ + + +G
Sbjct: 247 GPL-KSMKYGAIVKALYNFSKKHQNYGK 273
>gi|242798439|ref|XP_002483170.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218716515|gb|EED15936.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 378
Score = 41.5 bits (96), Expect = 0.094, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 32/85 (37%), Gaps = 9/85 (10%)
Query: 163 HDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDF----- 217
D D+ ++ L P+PDL+I G RL + WQV +E +
Sbjct: 294 SDNDTEMLPSSLFHPIKPEPDLLIIFGPIVRLEGYPPWQVRLTEIFCTGDKTSSIAGGNE 353
Query: 218 ----SRELFFHALNQYNLRDRRFGG 238
+ F AL +Y R+G
Sbjct: 354 EVTVEYQGFLRALWRYARASFRYGR 378
>gi|195350289|ref|XP_002041673.1| GM16799 [Drosophila sechellia]
gi|194123446|gb|EDW45489.1| GM16799 [Drosophila sechellia]
Length = 278
Score = 41.5 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 167 SSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHAL 226
S +++K L + P+P+L I + L W ++EF F E F L
Sbjct: 209 SDMLSKRLGF-EAPEPELGIVFARQTCTYGLLPWHARFTEFH-THPSGRHFDVEAFASIL 266
Query: 227 NQYNLRDRRFG 237
+Y+ ++R+G
Sbjct: 267 CKYSRCEQRWG 277
>gi|222624371|gb|EEE58503.1| hypothetical protein OsJ_09773 [Oryza sativa Japonica Group]
Length = 283
Score = 41.5 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 30/234 (12%), Positives = 77/234 (32%), Gaps = 49/234 (20%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ +++D R A + N+++ + VG+K + ++
Sbjct: 92 KHLAVVVD--SREAKN------------VAKINQLLCWLSNVGVKYVCLY---------- 127
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
+ K ++ G+R L V + T + +
Sbjct: 128 --------DIDGVLKKTFAPAMN---------GSRYGNSGKYLDVGANTKALTCCHKEMT 170
Query: 132 LFIAFNYSSRDEISRAI---KNIFQDIESGSVCSHDV--DSSLIAKYLDT--SDVPDPDL 184
+ +D I++A + + + + ++ + ++ L P+PDL
Sbjct: 171 IECISGSDGKDGIAKAASLLCSTCVNGNRNTCGNGEIVFTEADMSGALKAIGCGGPEPDL 230
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
++ G + F W++ Y+E + + A +++ + + FG
Sbjct: 231 LLVYGPARCHLGFPAWRLRYTEIMHMGPL-NSMKYGAIVKAFYKFSKKYQNFGK 283
>gi|255645054|gb|ACU23026.1| unknown [Glycine max]
Length = 254
Score = 41.5 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 19/117 (16%), Positives = 45/117 (38%), Gaps = 9/117 (7%)
Query: 128 TGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV------PD 181
+ L ++ +++A IF + ++D L+ L+ + P+
Sbjct: 139 DHMTLEFLSYADGKEAVAKAANLIFVEHLKRHELGGELDLILLEPQLNEALQIVGSKGPE 198
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDF-SRELFFHALNQYNLRDRRFG 237
PDL++ G + F W++ Y+E + + +F A+ + + +G
Sbjct: 199 PDLLLVYGPVRSHLGFPAWRLRYTEIIHMGSL--NFLRYGSLMKAIYNFTKVHQNYG 253
>gi|218192260|gb|EEC74687.1| hypothetical protein OsI_10383 [Oryza sativa Indica Group]
Length = 283
Score = 41.5 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 30/234 (12%), Positives = 77/234 (32%), Gaps = 49/234 (20%)
Query: 12 DHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRP 71
H+ +++D R A + N+++ + VG+K + ++
Sbjct: 92 KHLAVVVD--SREAKN------------VAKINQLLCWLSNVGVKYVCLY---------- 127
Query: 72 VSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLN 131
+ K ++ G+R L V + T + +
Sbjct: 128 --------DIDGVLKKTFAPAMN---------GSRYGNSGKYLDVGANTKALTCCHKEMT 170
Query: 132 LFIAFNYSSRDEISRAI---KNIFQDIESGSVCSHDV--DSSLIAKYLDT--SDVPDPDL 184
+ +D I++A + + + + ++ + ++ L P+PDL
Sbjct: 171 IECISGSDGKDGIAKAASLLCSTCVNGNRNTCGNGEIVFTEADMSGALKAIGCGGPEPDL 230
Query: 185 IIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
++ G + F W++ Y+E + + A +++ + + FG
Sbjct: 231 LLVYGPARCHLGFPAWRLRYTEIMHMGPL-NSMKYGAIVKAFYKFSKKYQNFGK 283
>gi|195470433|ref|XP_002087511.1| GE17374 [Drosophila yakuba]
gi|194173612|gb|EDW87223.1| GE17374 [Drosophila yakuba]
Length = 278
Score = 41.5 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 167 SSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHAL 226
S ++++ L + P+P+L I + L W ++EF F E F L
Sbjct: 209 SDMLSQRLGF-EAPEPELGIVFARQTCTYGLLPWHARFTEFH-THPSGRHFDVETFASIL 266
Query: 227 NQYNLRDRRFG 237
+Y+ ++R+G
Sbjct: 267 CKYSRCEQRWG 277
>gi|325110132|ref|YP_004271200.1| multi-sensor signal transduction histidine kinase [Planctomyces
brasiliensis DSM 5305]
gi|324970400|gb|ADY61178.1| multi-sensor signal transduction histidine kinase [Planctomyces
brasiliensis DSM 5305]
Length = 747
Score = 41.5 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 46/125 (36%), Gaps = 24/125 (19%)
Query: 17 IMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEIS 76
IMDGN W GL A H +V ++ A E+ L+ + S RR E+
Sbjct: 270 IMDGNRLW----GL--IACHHNSAKVVPPVIRDACELCGSVLSTYLMS----RRQQDELE 319
Query: 77 ELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAF 136
E V+L + + + L +L + + AE T+L T L
Sbjct: 320 EQVRLSE-AVAELAPILSNY----------ETLSEGLQRC---AEPLTKLFTAHGLVWHD 365
Query: 137 NYSSR 141
+ +
Sbjct: 366 GHDAF 370
>gi|195575709|ref|XP_002077719.1| GD23075 [Drosophila simulans]
gi|194189728|gb|EDX03304.1| GD23075 [Drosophila simulans]
Length = 278
Score = 41.1 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 167 SSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHAL 226
S +++K L + P+P+L I + L W ++EF F E F L
Sbjct: 209 SDMLSKRLGF-EAPEPELGIVFARQTCTYGLLPWHARFTEFH-THPSGRLFDVEAFASIL 266
Query: 227 NQYNLRDRRFG 237
+Y+ ++R+G
Sbjct: 267 CKYSRCEQRWG 277
>gi|330802777|ref|XP_003289390.1| hypothetical protein DICPUDRAFT_88482 [Dictyostelium purpureum]
gi|325080546|gb|EGC34097.1| hypothetical protein DICPUDRAFT_88482 [Dictyostelium purpureum]
Length = 308
Score = 41.1 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 36/243 (14%), Positives = 86/243 (35%), Gaps = 28/243 (11%)
Query: 8 SSPPDHIGIIM---DGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFS 64
+ P H+ +I+ D ++ + +EI+ + +G+ +TI
Sbjct: 83 TKIPKHLALILNHKD------QSKSIQSNQDTLSFYNKLSEIIIWSHIIGVNRITIL--- 133
Query: 65 INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQT 124
+N IS ++ + +K + + N +++ D ++
Sbjct: 134 -DNHGSLKKNISTFQNILDNNIKPFNNFNNDIIYSFKWLNNNKNINSDNDNNNNNDINKN 192
Query: 125 RLNTG--LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYL--DTSDVP 180
L L +A + E+ K + ++ +++ S + L +
Sbjct: 193 NKIKNRVLTLSVATVDDGKQELINITKKYIKQSKTNQNL--ELNESFVNSNLPNYIGGIN 250
Query: 181 -DPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL 239
+P++ + ++ S FL W V +EF+ + F + F Y +R+G +
Sbjct: 251 FEPEVALDFSDKQLFSGFLPWHVKLTEFIKVDH----FHQFYFER----YCQFLKRYGNI 302
Query: 240 SKK 242
K+
Sbjct: 303 KKR 305
>gi|194853939|ref|XP_001968255.1| GG24771 [Drosophila erecta]
gi|190660122|gb|EDV57314.1| GG24771 [Drosophila erecta]
Length = 278
Score = 41.1 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 167 SSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHAL 226
S +++K L + P+P+L I + L W ++EF F E F L
Sbjct: 209 SDMLSKRLGF-EAPEPELGIVFARQTCTYGLLPWHARFTEFH-THPSGRHFDVETFASIL 266
Query: 227 NQYNLRDRRFG 237
+Y+ ++R+G
Sbjct: 267 CKYSRCEQRWG 277
>gi|24580799|ref|NP_608577.2| transport and golgi organization 14 [Drosophila melanogaster]
gi|7296113|gb|AAF51407.1| transport and golgi organization 14 [Drosophila melanogaster]
gi|19528605|gb|AAL90417.1| RH48586p [Drosophila melanogaster]
gi|220949342|gb|ACL87214.1| Tango14-PA [synthetic construct]
gi|220958514|gb|ACL91800.1| Tango14-PA [synthetic construct]
Length = 278
Score = 41.1 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 167 SSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHAL 226
S +++K L + P+P+L I + L W ++EF F E F L
Sbjct: 209 SDMLSKRLGF-EAPEPELGIVFARQTCTYGLLPWHARFTEFH-THPSGRHFDVETFASIL 266
Query: 227 NQYNLRDRRFG 237
+Y+ ++R+G
Sbjct: 267 CKYSRCEQRWG 277
>gi|317159333|ref|XP_001827722.2| nuclear undecaprenyl pyrophosphate synthase [Aspergillus oryzae
RIB40]
Length = 360
Score = 41.1 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 35/233 (15%), Positives = 71/233 (30%), Gaps = 46/233 (19%)
Query: 40 IEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGF--YSLKKNN 97
++ E+ A + GI L+++ E S ++K L +
Sbjct: 140 MDEVAELAAWSVSAGIPVLSVY------------EKSGVLKSCIPTLHRIVTNKLSAYYG 187
Query: 98 IKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG-LNLFIAFNYSSRDEISRAIKNIFQDIE 156
+ RL + +++ + NT L + + R+ K + + +
Sbjct: 188 SPSQQPTLRLFAPHHPVYQPQDSHSTEKTNTDSLTVLLLSATDGRETFVDLTKTLAEMSQ 247
Query: 157 SGSVCSHDVDSSLIAKYL------------------------DTSDVPDPDLIIRTGGEK 192
+G + D+ L+ + D S P+PDL++
Sbjct: 248 NGKLSPEDITMELVDAEISEITTQPSQTALPTAAGNKTISIPDVSVKPEPDLLLVFRPFL 307
Query: 193 RLSDFLLWQVAYSEFVFIPE-------YWPDFSRELFFHALNQYNLRDRRFGG 238
+L + W + +E + Y + F L Y RFG
Sbjct: 308 KLDGYPPWHIRLTEMYCTGDKSNSITGYGEAVEYQGFLRGLWHYAGAQMRFGR 360
>gi|145344640|ref|XP_001416836.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577062|gb|ABO95129.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 312
Score = 41.1 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 31/95 (32%), Gaps = 2/95 (2%)
Query: 144 ISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVA 203
I+ A + V + T +P D+ + G L + WQ+
Sbjct: 220 IASARDGDGVEWAKFKYKPDVVRLERWMRERGT-FLPPADVAVVFGATFHLQGYPPWQLH 278
Query: 204 YSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+E FSR +++Y +RFG
Sbjct: 279 AAELFHEESL-DRFSRRDLARVIDKYAKTAQRFGK 312
>gi|83776470|dbj|BAE66589.1| unnamed protein product [Aspergillus oryzae]
Length = 325
Score = 41.1 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 35/233 (15%), Positives = 71/233 (30%), Gaps = 46/233 (19%)
Query: 40 IEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGF--YSLKKNN 97
++ E+ A + GI L+++ E S ++K L +
Sbjct: 105 MDEVAELAAWSVSAGIPVLSVY------------EKSGVLKSCIPTLHRIVTNKLSAYYG 152
Query: 98 IKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG-LNLFIAFNYSSRDEISRAIKNIFQDIE 156
+ RL + +++ + NT L + + R+ K + + +
Sbjct: 153 SPSQQPTLRLFAPHHPVYQPQDSHSTEKTNTDSLTVLLLSATDGRETFVDLTKTLAEMSQ 212
Query: 157 SGSVCSHDVDSSLIAKYL------------------------DTSDVPDPDLIIRTGGEK 192
+G + D+ L+ + D S P+PDL++
Sbjct: 213 NGKLSPEDITMELVDAEISEITTQPSQTALPTAAGNKTISIPDVSVKPEPDLLLVFRPFL 272
Query: 193 RLSDFLLWQVAYSEFVFIPE-------YWPDFSRELFFHALNQYNLRDRRFGG 238
+L + W + +E + Y + F L Y RFG
Sbjct: 273 KLDGYPPWHIRLTEMYCTGDKSNSITGYGEAVEYQGFLRGLWHYAGAQMRFGR 325
>gi|281207106|gb|EFA81289.1| hypothetical protein PPL_05268 [Polysphondylium pallidum PN500]
Length = 286
Score = 40.7 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 38/233 (16%), Positives = 75/233 (32%), Gaps = 26/233 (11%)
Query: 10 PPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWR 69
P H+ +I+D N +I+A + GI+ +TIF N
Sbjct: 76 VPHHLAVIIDIN---------------HADFSKIVDILAWSVIAGIQRITIF----ENTG 116
Query: 70 RPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTG 129
I + +++ + + + + +T N
Sbjct: 117 ILKQHIDTIQSMLEQRKLTSKSTTSSTKQQNEIYTYHWLNKLTSTTNNNNSNTKTTDNNK 176
Query: 130 -LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSD---VPDPDLI 185
+ I N + E+ K D + S S +DS+ I L +P +
Sbjct: 177 PFEISIVSNEDGKMELVNITKKYTIDRK--SNSSLQLDSNYIQANLPIHIGGADNEPQIA 234
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
+ L+ FL W + +EF+ + + + + + L Y ++R G
Sbjct: 235 MDFTERNILNGFLPWHIKLTEFIKVDNF-NQLYLDKYLNILKSYGRIEKRLGK 286
>gi|50289973|ref|XP_447418.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526728|emb|CAG60355.1| unnamed protein product [Candida glabrata]
Length = 325
Score = 40.7 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 32/196 (16%), Positives = 68/196 (34%), Gaps = 29/196 (14%)
Query: 45 EIVAAAAEVGIKNLTIFAFS---INNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVR 101
EIV + IK+++++ ++ N + E K + L K + + V+
Sbjct: 143 EIVCWSVCADIKHVSLYDYNGLLATN-------VDEFRKAVHHKLAKYYGPQNIPSFTVK 195
Query: 102 VIGNRLSLDDDILCVLKEA--EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGS 159
V + V ++ + + + + + R I K + +
Sbjct: 196 V--------PHLHKVYEDISKVGDEEKKSVIEISLLSAFDGRKTIVELFKTVSDLKDKKE 247
Query: 160 VCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYW----P 215
+ S D+ L+ L +PDLI+ G L+ + W + +E +W
Sbjct: 248 IQSSDLTMELLNTQLIELVGQEPDLILCFGPRLDLTGYPPWHIRLAEM-----HWEMDNN 302
Query: 216 DFSRELFFHALNQYNL 231
+ +F L Y+
Sbjct: 303 EVLYAVFIRGLRNYSS 318
>gi|29840879|gb|AAP05880.1| similar to GenBank Accession Number BC003223 unknown (protein for
MGC:7199) in Mus musculus [Schistosoma japonicum]
Length = 233
Score = 40.3 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 35/230 (15%), Positives = 70/230 (30%), Gaps = 45/230 (19%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNW 68
P HI + + ++ + +G+ L++
Sbjct: 49 KIPQHISFV---------------IFEEIFSAQDIANLIIWCSAIGVSYLSMSDM----- 88
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNT 128
I L I+ F+K+ + ++K D + + +
Sbjct: 89 ---KGNILHLRDSIEQFVKEKNFFVEK---------------DKTNKSSVVYNPLSCVLS 130
Query: 129 GLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRT 188
+ + D+I ++ + + S + + + + K VPD DL I
Sbjct: 131 KITVNYLGCDDGFDQICQSARYLSTSNYSLTDEKVNQTINELTK------VPDVDLTIHC 184
Query: 189 GGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
G S L WQ +SEF+ P F L ++ +R+G
Sbjct: 185 GLCSSFSGLLPWQSRFSEFIRCPSV-RGLEMSDFRQILYRFGKVKQRWGR 233
>gi|225428535|ref|XP_002280850.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 382
Score = 40.3 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDPDL++ G + F W++ Y+E + + A+ ++++ + +G
Sbjct: 325 PDPDLLLIYGPARCHLGFPAWRIRYTEIIHMGPL-KSMKYGSLLKAIYKFSMVHQNYG 381
>gi|297741434|emb|CBI32565.3| unnamed protein product [Vitis vinifera]
Length = 255
Score = 40.3 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
PDPDL++ G + F W++ Y+E + + A+ ++++ + +G
Sbjct: 198 PDPDLLLIYGPARCHLGFPAWRIRYTEIIHMGPL-KSMKYGSLLKAIYKFSMVHQNYG 254
>gi|195118374|ref|XP_002003712.1| GI21419 [Drosophila mojavensis]
gi|193914287|gb|EDW13154.1| GI21419 [Drosophila mojavensis]
Length = 277
Score = 40.3 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
VP+P+L I + L W V ++EF F + F L +Y ++R+G
Sbjct: 219 VPEPELGIVFSRQTCTYGLLPWHVRFTEFH-THRSGSYFDAKSFAQVLYKYARCEQRWGK 277
>gi|255641051|gb|ACU20805.1| unknown [Glycine max]
Length = 149
Score = 40.3 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 44/132 (33%), Gaps = 4/132 (3%)
Query: 69 RRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVI-GNRLSLD--DDILCVLKEAEDQTR 125
+R ++S+ KL + LK N + + L+ V E
Sbjct: 14 KRNEVQVSKEAKLTNDAFARIDLGLKGNGFDLLFQDSCKDYLNATKACSSVPNRVEGAGE 73
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLI 185
+ L + + + E N ++ I K + + PDPD++
Sbjct: 74 KDGMLEHTVEKHSGNNSEAEITSCNEMVEMTEEGEVPFVKLVD-IEKNMYMAVAPDPDIL 132
Query: 186 IRTGGEKRLSDF 197
IRT GE + F
Sbjct: 133 IRTSGEAQTQQF 144
>gi|195090456|ref|XP_001997496.1| GH10056 [Drosophila grimshawi]
gi|193905677|gb|EDW04544.1| GH10056 [Drosophila grimshawi]
Length = 286
Score = 39.9 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Query: 150 NIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVF 209
+ + HD +++++K L VP+P+L I + L W V ++EF
Sbjct: 200 AQVEGMLKERQTLHDGINAMLSKRLGF-VVPEPELGIVFARQTCTYGLLPWHVRFTEFH- 257
Query: 210 IPEYWPDFSRELFFHALNQYNLRDRRFGG 238
F+ + F L +Y ++R+G
Sbjct: 258 THRGGRYFNAKSFVKILYKYARCEQRWGK 286
>gi|195628094|gb|ACG35877.1| hypothetical protein [Zea mays]
Length = 273
Score = 39.9 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 24/204 (11%), Positives = 66/204 (32%), Gaps = 35/204 (17%)
Query: 42 VFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVR 101
++ + +G+K + ++ + + + + + + + I
Sbjct: 98 KVKRLLCWLSSMGVKYVCLY---------DIEGVLKKSFEPAVNVSRDRTAGEHFGIGAN 148
Query: 102 VIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVC 161
+ D+ C +E + ++ I++A + +G
Sbjct: 149 I--------KDLHCSQREMM----------IDCLSGSDGKEGIAKAASLLCSTYLNGDTH 190
Query: 162 SHD-----VDSSLIAKYLDT--SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYW 214
D + +A L P+PDL++ G + F W++ Y+E +++
Sbjct: 191 GDDKRKPAFTEADMAGALKAVGCGGPEPDLLLMYGPARCHLGFPTWRLRYTEIMYMGPL- 249
Query: 215 PDFSRELFFHALNQYNLRDRRFGG 238
AL ++ + + +G
Sbjct: 250 KSMKYGAIVKALYNFSKKHQNYGK 273
>gi|226493607|ref|NP_001143784.1| hypothetical protein LOC100276550 [Zea mays]
gi|195626934|gb|ACG35297.1| hypothetical protein [Zea mays]
Length = 256
Score = 39.9 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 24/204 (11%), Positives = 66/204 (32%), Gaps = 35/204 (17%)
Query: 42 VFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVR 101
++ + +G+K + ++ + + + + + + + I
Sbjct: 81 KVKRLLCWLSSMGVKYVCLY---------DIEGVLKKSFEPAVNVSRDRTAGEHFGIGAN 131
Query: 102 VIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVC 161
+ D+ C +E + ++ I++A + +G
Sbjct: 132 I--------KDLHCSQREMM----------IDCLSGSDGKEGIAKAASLLCSTYLNGDTH 173
Query: 162 SHD-----VDSSLIAKYLDT--SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYW 214
D + +A L P+PDL++ G + F W++ Y+E +++
Sbjct: 174 GDDKRKPAFTEADMAGALKAVGCGGPEPDLLLMYGPARCHLGFPTWRLRYTEIMYMGPL- 232
Query: 215 PDFSRELFFHALNQYNLRDRRFGG 238
AL ++ + + +G
Sbjct: 233 KSMKYGAIVKALYNFSKKHQNYGK 256
>gi|195032326|ref|XP_001988478.1| GH10552 [Drosophila grimshawi]
gi|193904478|gb|EDW03345.1| GH10552 [Drosophila grimshawi]
Length = 257
Score = 39.9 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Query: 155 IESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYW 214
+ HD +++++K L + P+P+L I + L W V ++EF
Sbjct: 176 MLKERQTLHDGINAMLSKRLGFVE-PEPELGIVFARQTCTYGLLPWHVRFTEFH-THRGG 233
Query: 215 PDFSRELFFHALNQYNLRDRRFGG 238
F+ + F L +Y ++R+G
Sbjct: 234 RYFNAKSFVKILYKYARCEQRWGK 257
>gi|195088346|ref|XP_001997465.1| GH13897 [Drosophila grimshawi]
gi|193905448|gb|EDW04315.1| GH13897 [Drosophila grimshawi]
Length = 286
Score = 39.5 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Query: 155 IESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYW 214
+ HD +++++K L VP+P+L I + L W V ++EF
Sbjct: 205 MLKERQTLHDGINAMLSKRLGF-VVPEPELGIVFARQTCTYGLLPWHVRFTEFH-THRGG 262
Query: 215 PDFSRELFFHALNQYNLRDRRFGG 238
F+ + F L +Y ++R+G
Sbjct: 263 RYFNAKSFVKILYKYARCEQRWGK 286
>gi|297836152|ref|XP_002885958.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297331798|gb|EFH62217.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 534
Score = 39.5 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 35/93 (37%), Gaps = 15/93 (16%)
Query: 130 LNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS---DVPDPDLII 186
LN A+ Y+ + +H ++S+ I +L D D D +
Sbjct: 202 LNYTYAWGYN----------KEYPRCYGTMEENHSINSTSIPPHLYMHNLHDSRDSDKLF 251
Query: 187 RTGGEKRLSDFLLWQVAYSEFVFIPEYW--PDF 217
++ L D + W + + F+P W P+F
Sbjct: 252 ICQKDQSLIDKVPWLIVQANVYFVPSLWFNPNF 284
>gi|255939494|ref|XP_002560516.1| Pc16g00980 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585139|emb|CAP92768.1| Pc16g00980 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 357
Score = 39.5 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 39/102 (38%), Gaps = 15/102 (14%)
Query: 124 TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYL--------- 174
T + L + + + R+ + K + + ++G + D+ L+ +
Sbjct: 221 TAQHQTLTILLLSSTDGRETLVDLTKTLAEMSQNGKLSPEDITPDLVDAEISEITTQPLS 280
Query: 175 ------DTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFI 210
DT P+PDL++ G +L + WQ+ +E
Sbjct: 281 MDPSLPDTVLKPEPDLLLVFGPFLKLDGYPPWQLRLTEMYCT 322
>gi|260204317|ref|ZP_05771808.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis K85]
Length = 42
Score = 39.5 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 16 IIMDGNGRWAAARGLPRC-AGHRKGIEVFNEI 46
++ DGN RWA + G G+R G E+
Sbjct: 1 MLCDGNRRWARSAGYDDVSYGYRMGAAKIAEM 32
>gi|238008932|gb|ACR35501.1| unknown [Zea mays]
Length = 302
Score = 39.2 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 24/204 (11%), Positives = 66/204 (32%), Gaps = 35/204 (17%)
Query: 42 VFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVR 101
++ + +G+K + ++ + + + + + + + I
Sbjct: 127 KVKRLLCWLSSMGVKYVCLY---------DIEGVLKKSFEPAVNVSRDRTAGEHFGIGAN 177
Query: 102 VIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVC 161
+ D+ C +E + ++ I++A + +G
Sbjct: 178 I--------KDLHCSQREMM----------IDCLSGSDGKEGIAKAASLLCSTYLNGDTH 219
Query: 162 SHD-----VDSSLIAKYLDT--SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYW 214
D + +A L P+PDL++ G + F W++ Y+E +++
Sbjct: 220 GDDKRKPAFTEADMAGALKAVGCGGPEPDLLLMYGPARCHLGFPTWRLRYTEIMYMGPL- 278
Query: 215 PDFSRELFFHALNQYNLRDRRFGG 238
AL ++ + + +G
Sbjct: 279 KSMKYGAIVKALYNFSKKHQNYGK 302
>gi|224077818|ref|XP_002305421.1| predicted protein [Populus trichocarpa]
gi|222848385|gb|EEE85932.1| predicted protein [Populus trichocarpa]
Length = 254
Score = 39.2 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 16/119 (13%), Positives = 42/119 (35%), Gaps = 8/119 (6%)
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDT-------SD 178
+ L A ++ +++ +F + + + + T
Sbjct: 137 DQKHMTLEFASISDGKEAVAKGGNVLFMKYSKVANSGAEQKEQIFTEANMTEALRAVGCG 196
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
P+PDL++ G + F W++ Y+E V + A+ ++ + +++G
Sbjct: 197 GPEPDLLLVYGPARCHLGFPAWRIRYTEIVHMGPL-KSVRYGSLVKAIYKFTIVRQKYG 254
>gi|6062588|gb|AAF02902.1|AF065604_2 BC2-ORF2/A-HLG [Giardia intestinalis]
Length = 377
Score = 39.2 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 47/253 (18%), Positives = 85/253 (33%), Gaps = 62/253 (24%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEV--FNEIVAAAAEVGIKNLT 59
+ + + P HI I+ DG GR H + + + I+ L+
Sbjct: 11 IRRQLPTELPQHIVIVADGTGR--------SSFQHNYDLFPCCLLQHIRLFVSFKIRCLS 62
Query: 60 I-----------FAFSINNWRRPVSEISELVK-------LIKSFLKKGFYSLKKNNIKVR 101
F N +S+L++ L+ + + + NNI +
Sbjct: 63 FVLYGLFSPNTSFDSRSKNLTTMKDALSDLLEYLKTASFLLYITVYGSYNHSRPNNIFLE 122
Query: 102 VIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVC 161
+ S+++ L + E Q++ + L I +YSS + Q+ + +
Sbjct: 123 CLELMGSINE--LTERRSTEVQSKQMYTITLSIFVSYSSLSSLHDVSVKTCQENSTECMI 180
Query: 162 SHDVDSSLIAKYL---------------DTSD-----------------VPDPDLIIRTG 189
+ V+ S IA L S +P PD+ RT
Sbjct: 181 NSTVEPSSIALALSCYGIRPYPGITGEIYMSGAVGTVSSPSFTKCVATPLPPPDIFARTS 240
Query: 190 GEKRLSDFLLWQV 202
GEKR+ D LW++
Sbjct: 241 GEKRIGDCFLWEI 253
>gi|308161605|gb|EFO64044.1| BC2 protein [Giardia lamblia P15]
Length = 377
Score = 38.8 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 46/253 (18%), Positives = 85/253 (33%), Gaps = 62/253 (24%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEV--FNEIVAAAAEVGIKNLT 59
+ + + P HI I+ DG GR H + + + I+ L+
Sbjct: 11 IRRQLPTELPQHIVIVADGTGR--------SSFQHNYDLFPCCLLQHIRLFVSFKIRCLS 62
Query: 60 I-----------FAFSINNWRRPVSEISELVK-------LIKSFLKKGFYSLKKNNIKVR 101
F N +S+L++ L+ + + + NNI +
Sbjct: 63 FVLYGLFSPNTSFDSRSKNLTTMKDALSDLLEYLKTASFLLYITVYGSYNHSRPNNIFLE 122
Query: 102 VIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVC 161
+ S+++ L + E Q++ + L I +YSS + Q+ + +
Sbjct: 123 CLELMGSINE--LTERRSTEVQSKQMYTITLSIFVSYSSLSSLHDVSVKTCQENSTECMI 180
Query: 162 SHDVDSSLIAKYL---------------DTSD-----------------VPDPDLIIRTG 189
+ V+ S IA L S +P PD+ RT
Sbjct: 181 NSTVEPSSIALALSCYGIRPYPGITGEIYMSGAVGTVSSPSFTKCVATPLPPPDIFARTS 240
Query: 190 GEKRLSDFLLWQV 202
GE+R+ D LW++
Sbjct: 241 GERRIGDCFLWEI 253
>gi|303272976|ref|XP_003055849.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461933|gb|EEH59225.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 360
Score = 38.8 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 177 SDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRF 236
+P+ DL+I G L+ + WQ +E F+RE F L +Y RRF
Sbjct: 300 RHLPNVDLLIVFGEHFHLAGYPAWQTWKTEIY-RERSARGFTRERFESLLRRYANTARRF 358
Query: 237 GG 238
G
Sbjct: 359 GR 360
>gi|121714779|ref|XP_001274999.1| conserved hypothetical protein [Aspergillus clavatus NRRL 1]
gi|119403155|gb|EAW13573.1| conserved hypothetical protein [Aspergillus clavatus NRRL 1]
Length = 361
Score = 38.4 bits (88), Expect = 0.82, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 31/103 (30%), Gaps = 7/103 (6%)
Query: 143 EISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQV 202
E+ A + S D+ + S P+PDL++ RL + W +
Sbjct: 259 ELIDAEISEITTQPLQSNSPRLADTQTNTHHPILSIKPEPDLLLVFAPYLRLDGYPPWHI 318
Query: 203 AYSEFVFI-------PEYWPDFSRELFFHALNQYNLRDRRFGG 238
+E Y + + L Y RFG
Sbjct: 319 RLTEMFCTGGKSSGRTGYGEAVEYQGYLRGLWHYAGAQMRFGR 361
>gi|218190253|gb|EEC72680.1| hypothetical protein OsI_06238 [Oryza sativa Indica Group]
Length = 130
Score = 38.0 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 19/117 (16%), Positives = 47/117 (40%), Gaps = 6/117 (5%)
Query: 126 LNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSH-DVDSSLIAKYLD---TSDVPD 181
+ G+ + + ++ I++A ++ + S + + L T P+
Sbjct: 16 RHGGMFIECLSSSDGKEAIAKAANLLYSTCCNSDNKSEIAFTEADMTHALKAVGTGG-PE 74
Query: 182 PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGG 238
PDL++ G + F W++ Y+E +++ AL Q++ + + +G
Sbjct: 75 PDLLLVYGPGRFHLGFPAWRLRYTEIMYVGPL-ESMKYGTIVKALYQFSRKYQNYGK 130
>gi|195454495|ref|XP_002074264.1| GK18421 [Drosophila willistoni]
gi|194170349|gb|EDW85250.1| GK18421 [Drosophila willistoni]
Length = 276
Score = 38.0 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 30/205 (14%), Positives = 64/205 (31%), Gaps = 22/205 (10%)
Query: 43 FNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKG---------FYSL 93
+ A +VGI++++++ R + + ++
Sbjct: 85 LTRLFGFALKVGIQHVSVY-------DRREQDKGYVDLAAVGEMQADGRFTWPPIKVPKK 137
Query: 94 KKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQ 153
++N K+ G + Q + N G L +
Sbjct: 138 EENGYKLNGNGYTNGGTPHFEQLK---LYQIKANDGHALIADVCRELYQQRKTEFVQNLL 194
Query: 154 DIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEY 213
+ + + S ++ K L VP+P+L + + L W V ++EF
Sbjct: 195 QDQRREAITEQI-SEMLGKRLGF-VVPEPELGLIFARQTCTYGLLPWHVRFTEFH-THPS 251
Query: 214 WPDFSRELFFHALNQYNLRDRRFGG 238
F F L +Y+ ++R+G
Sbjct: 252 GRYFDVHSFTQLLYKYSRCEQRWGK 276
>gi|115444843|ref|NP_001046201.1| Os02g0197700 [Oryza sativa Japonica Group]
gi|49388159|dbj|BAD25287.1| unknown protein [Oryza sativa Japonica Group]
gi|49388344|dbj|BAD25454.1| unknown protein [Oryza sativa Japonica Group]
gi|113535732|dbj|BAF08115.1| Os02g0197700 [Oryza sativa Japonica Group]
Length = 240
Score = 37.6 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 26/203 (12%), Positives = 70/203 (34%), Gaps = 33/203 (16%)
Query: 40 IEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIK 99
+++ + +GI L ++ + + L + I+
Sbjct: 67 ALKVKQLLRWFSTIGINYLILY---------DIEGV--------------LKELIQPGIE 103
Query: 100 VRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGS 159
GN + L V+ + + + G+ + + ++ I++ ++ +
Sbjct: 104 TSTDGN----PINSLDVVADTKASCYRHGGMFMECLSSSDGKEAIAKVANLLYSTCCNSD 159
Query: 160 VCSH-DVDSSLIAKYLD---TSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWP 215
S + + L T P+PDL++ G + F W++ Y+E +++
Sbjct: 160 NKSEIAFTEADMTHALKAVGTGG-PEPDLLLVYGPGRFHLGFPAWRLRYTEIMYVGPL-E 217
Query: 216 DFSRELFFHALNQYNLRDRRFGG 238
AL +++ + + +G
Sbjct: 218 SMKYGTIVKALYRFSRKYQNYGK 240
>gi|198475306|ref|XP_001357010.2| GA18423 [Drosophila pseudoobscura pseudoobscura]
gi|198138762|gb|EAL34076.2| GA18423 [Drosophila pseudoobscura pseudoobscura]
Length = 313
Score = 37.2 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Query: 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPD--FSRELFFHALNQYNLRDR 234
D PDPDL I + + W V ++EF P D F+ E F L +Y+ ++
Sbjct: 222 DAPDPDLGIIFARQTCTYGLMPWHVRFTEFHTHPS---DRYFNVESFTKVLYRYSRCEQ 277
>gi|253681315|ref|ZP_04862113.1| malonyl CoA-acyl carrier protein transacylase [Clostridium
botulinum D str. 1873]
gi|253562553|gb|EES92004.1| malonyl CoA-acyl carrier protein transacylase [Clostridium
botulinum D str. 1873]
Length = 314
Score = 37.2 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 36/183 (19%), Positives = 60/183 (32%), Gaps = 24/183 (13%)
Query: 26 AARGL------PRCAGHRKGI-----EVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSE 74
RG P G I E ++ E GI + + S E
Sbjct: 114 KKRGKFMQEEVPEGVGAMAAIIGLDREKVSKACEECEEYGIVEVANYNCSSQ--IVIAGE 171
Query: 75 ISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFI 134
I+ + K +S K G + K ++ + L + KE E T + + +
Sbjct: 172 INAVDKACESAKKLGAKRVIKLSVSAPF--HTSMLKGAGEKLYKELEKVTLNHINIPVVT 229
Query: 135 AFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRL 194
+ +I+ +K+I + SV D+ +I + D I G K L
Sbjct: 230 NVTANYITDIND-VKDILRRQVMSSVLWEDIVKKMINEG--------VDTFIEVGPGKAL 280
Query: 195 SDF 197
S F
Sbjct: 281 SGF 283
>gi|167948137|ref|ZP_02535211.1| undecaprenyl pyrophosphate synthetase [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 61
Score = 37.2 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 27/59 (45%)
Query: 121 EDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDV 179
E T N+GL L +A NY R +I RA + + + +G + +D +A L
Sbjct: 2 EALTAANSGLILQVAANYGGRWDIIRAARRLARQAAAGEIDVDAIDEQALAAQLAFPGS 60
>gi|115449965|ref|XP_001218742.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114187691|gb|EAU29391.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 356
Score = 37.2 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 41/268 (15%), Positives = 79/268 (29%), Gaps = 65/268 (24%)
Query: 9 SPPDHIGIIMDGNGRWAAARGLPRCAGHRKG-IEVFNEIVAAAAEVGIKNLTIFAFSINN 67
P H+ +I+ L + ++ E+ A +A GI L+++
Sbjct: 116 RLPQHLSVIL----------SLRKEDDALAVLMDEVAELAAWSASAGIPVLSVY------ 159
Query: 68 WRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQ---- 123
E S L+K L + + G+ L Q
Sbjct: 160 ------ERSGLLKSCIPLLHQIVTKKLSS-----YYGSPSQQPTLQLFAPHHPVYQPQDE 208
Query: 124 ------TRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLD-- 175
+ L L + R+ K + + ++G + D+ L+ +
Sbjct: 209 PDRFAEKSNSQTLTLLLLSATDGRETFVDLTKTLAEMSQNGKLSPADITMELVDAEISEI 268
Query: 176 -------TSDVPD-----------PDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDF 217
T++ PD PDL++ G +L + W + +E + +
Sbjct: 269 TTQPSQPTTEGPDDAVPAVAVKPEPDLLLVFGPILKLDGYPPWHIRLTEMFCTGDNSSNM 328
Query: 218 S-------RELFFHALNQYNLRDRRFGG 238
+ + F L Y RFG
Sbjct: 329 NGSGGAVEYQGFLRGLWHYAGAQMRFGR 356
>gi|75764986|ref|ZP_00744311.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|74487528|gb|EAO51419.1| Undecaprenyl pyrophosphate synthetase [Bacillus thuringiensis
serovar israelensis ATCC 35646]
Length = 54
Score = 37.2 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 1 MVASMMSSSPPDHIGIIMDG 20
+V + P+HI IIMDG
Sbjct: 20 LVEEVNKGYIPEHIAIIMDG 39
>gi|119484044|ref|XP_001261925.1| hypothetical protein NFIA_096500 [Neosartorya fischeri NRRL 181]
gi|119410081|gb|EAW20028.1| conserved hypothetical protein [Neosartorya fischeri NRRL 181]
Length = 361
Score = 37.2 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 31/103 (30%), Gaps = 7/103 (6%)
Query: 143 EISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQV 202
E+ A + S D A + + P+PDL++ +L + W +
Sbjct: 259 ELVDAEVSEITTQPLQPASSSIGDRRTTAVHPAIAVKPEPDLLLVFAPFLKLDGYPPWHI 318
Query: 203 AYSEFVFI-------PEYWPDFSRELFFHALNQYNLRDRRFGG 238
+E Y + F L Y RFG
Sbjct: 319 RLTEMFCTGGKSSGVTSYGEAVEYQGFLRGLWHYAGAQMRFGR 361
>gi|47181774|emb|CAG13816.1| unnamed protein product [Tetraodon nigroviridis]
Length = 33
Score = 36.8 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 179 VPDPDLIIRTGGEKRLSDFLLWQVAYSEFV 208
+PDP+L+++ G FL W + +EF+
Sbjct: 4 IPDPELVLKFGPVDSTLGFLPWHIRLTEFM 33
>gi|70982799|ref|XP_746927.1| conserved hypothetical protein [Aspergillus fumigatus Af293]
gi|66844552|gb|EAL84889.1| conserved hypothetical protein [Aspergillus fumigatus Af293]
gi|159123811|gb|EDP48930.1| conserved hypothetical protein [Aspergillus fumigatus A1163]
Length = 360
Score = 36.8 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 30/103 (29%), Gaps = 7/103 (6%)
Query: 143 EISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQV 202
E+ A + D A + + P+PDL++ +L + W +
Sbjct: 258 ELVDAEISEITTQPLQPASLSIGDRQTTAVHPTIAVKPEPDLLLVFAPFLKLDGYPPWHI 317
Query: 203 AYSEFVFI-------PEYWPDFSRELFFHALNQYNLRDRRFGG 238
+E Y + F L Y RFG
Sbjct: 318 RLTEMFCTGGKGSGVTSYGDAVEYQGFLRGLWHYAGAQMRFGR 360
>gi|147817659|emb|CAN60160.1| hypothetical protein VITISV_007130 [Vitis vinifera]
Length = 991
Score = 36.8 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 40/135 (29%), Gaps = 30/135 (22%)
Query: 15 GIIMDGNG------RWAAARGLPRCAGHRKGIEVFNE----IVAAAA--EVGIKNLTI-- 60
+M G+ R+A + LPR GH + ++ E I+N
Sbjct: 819 AFLMVGHREGYQKVRFARRKTLPRLFGHLDSFSAGRKDNILLLRECRYHEKNIRNNKCXX 878
Query: 61 ----------------FAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIG 104
+ S N + L L SF + K K+ IG
Sbjct: 879 IDXRVARHIXXRVSVRYWXSQKNPSEDQRDAEGLSWLTTSFSRIINGRWCKFPQKLNPIG 938
Query: 105 NRLSLDDDILCVLKE 119
+ ++ D + +
Sbjct: 939 HCSNIQQDFAELHQH 953
>gi|311747796|ref|ZP_07721581.1| proline dehydrogenase [Algoriphagus sp. PR1]
gi|311302707|gb|EAZ80097.2| proline dehydrogenase [Algoriphagus sp. PR1]
Length = 393
Score = 36.8 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 28/192 (14%), Positives = 53/192 (27%), Gaps = 46/192 (23%)
Query: 13 HIGI--------IMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEV---GIKNLTIF 61
HI + IM GH G E + + A ++ GI+ + +
Sbjct: 48 HIALKLKLPIKWIM-----------KQTIFGHFCGGETIKKSIQACEKLSQFGIEAILDY 96
Query: 62 A----FSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
+ ++ R EI + + + IKV +G+ L
Sbjct: 97 SVEGKGDEESFERTTEEIKQTMIESAKT-----DYMPFGVIKVTGLGDYHHLIKIQAGEK 151
Query: 118 KEAE---------------DQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCS 162
AE +T + GL + I S + A+ + + C
Sbjct: 152 LTAEEQKGFDKTKARVDMLCKTAHDLGLKILIDAEESWFQDTVDAMTYEMMEKYNRERCV 211
Query: 163 HDVDSSLIAKYL 174
+ +
Sbjct: 212 VYNTFQMYRHDM 223
>gi|319408850|emb|CBI82507.1| conserved hypothetical protein [Bartonella schoenbuchensis R1]
Length = 485
Score = 36.8 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 19/50 (38%), Gaps = 7/50 (14%)
Query: 15 GIIMDGNGR--WAAARGLPRCAGHRKGIEVFNEIVAA-AAEVGIKNLTIF 61
I+D N R WA RCAG+ G+ A + I T +
Sbjct: 424 AFILDDNNRFHWAK----ERCAGYNHGMYNIRSRARYHALRLRIPEGTPW 469
>gi|302788166|ref|XP_002975852.1| hypothetical protein SELMODRAFT_442999 [Selaginella moellendorffii]
gi|300156128|gb|EFJ22757.1| hypothetical protein SELMODRAFT_442999 [Selaginella moellendorffii]
Length = 252
Score = 36.8 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 35/234 (14%), Positives = 87/234 (37%), Gaps = 37/234 (15%)
Query: 11 PDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRR 70
P + I++DG RK + E++ A GI+ + ++
Sbjct: 48 PRVVAIVVDG-------------ESARKCRDEIVELLVFLAAAGIRQVALY--------- 85
Query: 71 PVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGL 130
++ ++K ++L+K S R + + + + + +T+ +
Sbjct: 86 ---DMEGILKRYGTYLEKRVVSSTWK----RQLKHDFHFSNGVDPFPRSNPIRTKSEPRM 138
Query: 131 NLFIAFNYSSRDEISRAIKNIFQD-----IESGSVCSHDVDSSLIAKYLD--TSDVPDPD 183
+ + ++ I+ A + I D + + + + + + L PDP+
Sbjct: 139 VVELLSMSDGKNAIAEAARRIHDDLRGSSRQDQLERINSLTETDVNESLKQIGRWKPDPE 198
Query: 184 LIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFG 237
L++ G + F W++ +E +++ E + +AL Y+ + R+G
Sbjct: 199 LMLVFGKINSVQGFPPWRIKLTEIIYMGELRRNIDSS-LSYALQAYSGKTHRYG 251
>gi|159120070|ref|XP_001710251.1| BC2-ORF2 [Giardia lamblia ATCC 50803]
gi|6062580|gb|AAF02896.1|AF065602_2 BC2-ORF2 [Giardia intestinalis]
gi|157438369|gb|EDO82577.1| BC2-ORF2 [Giardia lamblia ATCC 50803]
Length = 377
Score = 36.8 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 45/263 (17%), Positives = 82/263 (31%), Gaps = 59/263 (22%)
Query: 2 VASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEV--FNEIVAAAAEVGIKNLT 59
+ + + P HI I+ DG GR H + + V I+ L+
Sbjct: 11 IRRQLPTELPQHIVIVADGTGR--------SSFQHNYDLFPCCLLQHVRLFVSFRIQCLS 62
Query: 60 IFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNN--IKVRVIGNRLSLDDD----- 112
+ + + + S+ + +K L L+ + + + V G+ +
Sbjct: 63 LVLYGLFSPNTSSDSRSKNLATMKDALSDLLDYLRTADFLLYITVYGSYHHSRPNSTFLE 122
Query: 113 ---------ILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSH 163
L + E Q + L I +YSS + I Q+ + V +
Sbjct: 123 CLELMGSINELTEKRGTEVQPEQRYTVRLSIFVSYSSLSSLHDVSVKICQENSTERVINS 182
Query: 164 DVDSSLIAKYLDTSD--------------------------------VPDPDLIIRTGGE 191
++ S IA L +P PD+ RT E
Sbjct: 183 TIEPSSIALALSCHGIRPYPGITEDIYMSGPVGLVPSPSLTKCVTTPLPPPDIFARTSDE 242
Query: 192 KRLSDFLLWQV-AYSEFVFIPEY 213
KR+ D LW++ Y + +
Sbjct: 243 KRIGDCFLWEIPLYKCMLLWNVH 265
>gi|327194882|gb|EGE61713.1| hypothetical protein RHECNPAF_1005 [Rhizobium etli CNPAF512]
Length = 421
Score = 36.5 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 43/143 (30%), Gaps = 27/143 (18%)
Query: 9 SPPDHIGIIMDGN------GRWAAARGLPRCAGHRKGI-----EVFNEIVAAAAEVGIKN 57
P + IIM GN RWA H G + + A E
Sbjct: 255 GVPAFLAIIMPGNLSDRVDARWA----------HVCGGCGCHPDPVRAALRAITEAAQSR 304
Query: 58 LTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVL 117
LT A S +++ +L KS + L + ++R R I +
Sbjct: 305 LTAIAGSRDDFS-----PRIYQRLDKSAAMQQVVELCAGDGRMRAFLPRHRRPATIQETI 359
Query: 118 KE-AEDQTRLNTGLNLFIAFNYS 139
A+ T + + F +
Sbjct: 360 GHIADRLTATGIEQIVVVPFPHH 382
>gi|321460720|gb|EFX71760.1| hypothetical protein DAPPUDRAFT_308734 [Daphnia pulex]
Length = 272
Score = 36.1 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 25/206 (12%), Positives = 71/206 (34%), Gaps = 11/206 (5%)
Query: 41 EVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFL----KKGFYSLKKN 96
+ + ++ I +F N R ++ + V + + +GF + ++
Sbjct: 70 QTIGSDLKLLQKLPIHVACLFTEKDVNIDRIITIVEWFVSMGVYCISLYDHEGFLTSCRD 129
Query: 97 NIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIE 156
IK+++ G + + + NL + + +
Sbjct: 130 EIKIKLKGVAANFRNGLKSKSVAVHKGFVTKEFYNLDSINIFIMNQHDGKPMFAQVTRQI 189
Query: 157 SGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSD----FLLWQVAYSEFVFIPE 212
G + +D ++ ++ DP+L+++ G LS+ + W + ++ + +P
Sbjct: 190 VGELSYCQIDQGVVENTMNQFYPKDPELMLQFG--SLLSNTTLGYSPWHLRLTQMMRVPN 247
Query: 213 YWPDFSRELFFHALNQYNLRDRRFGG 238
+ + + +Y +R+G
Sbjct: 248 HM-RIRVDHLVSTMLEYGSCQQRYGK 272
>gi|209364153|ref|YP_001425039.2| ornithine cyclodeaminase [Coxiella burnetii Dugway 5J108-111]
gi|207082086|gb|ABS78421.2| ornithine cyclodeaminase [Coxiella burnetii Dugway 5J108-111]
Length = 323
Score = 36.1 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 9/63 (14%), Positives = 21/63 (33%)
Query: 38 KGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNN 97
G++ + + GIK + I+ N +R EI + +++
Sbjct: 141 AGVQARQQFLGVCLVRGIKEIRIYNRGKENLKRFADEIRAIKGNAVKVVEENVIEQAIEG 200
Query: 98 IKV 100
+
Sbjct: 201 ADI 203
>gi|165918658|ref|ZP_02218744.1| ornithine cyclodeaminase/mu-crystallin family protein [Coxiella
burnetii RSA 334]
gi|165917593|gb|EDR36197.1| ornithine cyclodeaminase/mu-crystallin family protein [Coxiella
burnetii RSA 334]
Length = 319
Score = 36.1 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 9/63 (14%), Positives = 21/63 (33%)
Query: 38 KGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNN 97
G++ + + GIK + I+ N +R EI + +++
Sbjct: 137 AGVQARQQFLGVCLVRGIKEIRIYNRGKENLKRFADEIRAIKGNAVKVVEENVIEQAIEG 196
Query: 98 IKV 100
+
Sbjct: 197 ADI 199
>gi|281209687|gb|EFA83855.1| hypothetical protein PPL_02925 [Polysphondylium pallidum PN500]
Length = 369
Score = 36.1 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 30/210 (14%), Positives = 61/210 (29%), Gaps = 24/210 (11%)
Query: 38 KGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVS----EISELVKLIKSFLK-KGFYS 92
K + ++ + GI + + +R I L L +
Sbjct: 60 KSFKKMIDLTIMMMKHGIHTVIYPMWFPTLGKRGPEYYPKFIKYLWGLNCLITDSRLMDI 119
Query: 93 LKKNNIKVRVIGNRLSL-----DDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRA 147
I++ G D+++ +++ +T+ T L N +S EI
Sbjct: 120 FLSLGIRIVFYGEWREFCRIGNDEELENLMESLMSKTKHCTNHLLLFGTNITSTTEIISK 179
Query: 148 IKNIFQDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSE- 206
+ + I + +++ +D+ DL I G R + E
Sbjct: 180 LSIDYFQIHNKLPSKNELIEQYYGVPVDS-----VDLYI---GFDRFCTDGRPPIISEEG 231
Query: 207 ---FVFIPEYWPDFSRELFFHALNQ--YNL 231
F F+++ F L Y
Sbjct: 232 SENLYFTVSPHSYFNKKQFRSILFDHIYAR 261
>gi|305304|gb|AAA29158.1| permease [Giardia intestinalis]
Length = 377
Score = 35.7 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Query: 161 CSHDVDSSL---IAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQV-AYSEFVFIPEY 213
C D SL K + T +P PD+ RT EKR+ D LW++ Y + +
Sbjct: 210 CPDQSDWSLLHPFTKCVTTP-LPPPDIFARTSDEKRIGDCFLWEIPLYKCMLLWNVH 265
>gi|269791956|ref|YP_003316860.1| citrate lyase, alpha subunit [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269099591|gb|ACZ18578.1| citrate lyase, alpha subunit [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 518
Score = 35.7 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Query: 22 GRWAAARGLPRCAGH--RKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELV 79
R G+ H R G EV ++ A +GI++LT+ S+ + E+S V
Sbjct: 62 RRSGLESGMTVSFHHHLRNGDEVLCRVLEACERLGIRDLTLAPSSLTDAH---EEVSGFV 118
Query: 80 K 80
+
Sbjct: 119 R 119
>gi|212541508|ref|XP_002150909.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224]
gi|210068208|gb|EEA22300.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224]
Length = 391
Score = 35.7 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 29/81 (35%), Gaps = 9/81 (11%)
Query: 167 SSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDF--------- 217
++ L T+ P+PDL+I +L + WQV +E +
Sbjct: 311 MEMLPPTLFTAIKPEPDLLIIFNPIVKLDGYPPWQVRLTEIFCTGDKTSSIAAGREEVAV 370
Query: 218 SRELFFHALNQYNLRDRRFGG 238
+ F L +Y RFG
Sbjct: 371 EYQAFLRGLWKYAGASFRFGR 391
>gi|325090173|gb|EGC43483.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 387
Score = 35.7 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 7/66 (10%)
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS-------RELFFHALNQYNLR 232
DPDL++ G RL + WQ+ +E + + + F L +Y
Sbjct: 322 SDPDLLMVFGPFVRLDGYPPWQLRLTEIYCTGDQGSLITGGGEAVEYQKFLKGLWRYARA 381
Query: 233 DRRFGG 238
+ RFG
Sbjct: 382 EMRFGR 387
>gi|240278912|gb|EER42418.1| conserved hypothetical protein [Ajellomyces capsulatus H143]
Length = 344
Score = 35.7 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 7/66 (10%)
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS-------RELFFHALNQYNLR 232
DPDL++ G RL + WQ+ +E + + + F L +Y
Sbjct: 279 SDPDLLMVFGPFVRLDGYPPWQLRLTEIYCTGDQGSLITGGGEAVEYQKFLKGLWRYARA 338
Query: 233 DRRFGG 238
+ RFG
Sbjct: 339 EMRFGR 344
>gi|317028329|ref|XP_001390566.2| nuclear undecaprenyl pyrophosphate synthase [Aspergillus niger CBS
513.88]
Length = 362
Score = 35.7 bits (81), Expect = 6.6, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 22/66 (33%), Gaps = 7/66 (10%)
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSREL-------FFHALNQYNLR 232
P+PDL++ G +L + W + +E + F L Y
Sbjct: 297 PEPDLLLVFGSFLKLDGYPPWHIRLTEMYCTGGRNSGITNSDEAVEYHGFLRGLWHYAGA 356
Query: 233 DRRFGG 238
RFG
Sbjct: 357 QMRFGR 362
>gi|317127169|ref|YP_004093451.1| cellulase [Bacillus cellulosilyticus DSM 2522]
gi|121781|sp|P06566|GUN1_BACS4 RecName: Full=Endoglucanase A; AltName: Full=Cellulase A; AltName:
Full=Endo-1,4-beta-glucanase A
gi|142660|gb|AAA22301.1| cellulase (EC 3.2.1.4) [Bacillus sp.]
gi|315472117|gb|ADU28720.1| Cellulase [Bacillus cellulosilyticus DSM 2522]
Length = 488
Score = 35.3 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 32/187 (17%), Positives = 58/187 (31%), Gaps = 25/187 (13%)
Query: 41 EVFNEIVAAAAEVGIKNLTIFAFSINN--------WRRPVSEISELVKLIKSFLKKGFYS 92
E E V AA ++GI + + +N + E+S L + + +
Sbjct: 104 EKVKEAVEAAIDLGIYVIIDWHILSDNDPNIYKEEAKEFFDEMSALYGDYPNVIYEIANE 163
Query: 93 LKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIF 152
+N++ D I +E R N N+ I + ++ A N
Sbjct: 164 PNGHNVR---------WDSHIKPYAEEVIPVIRANDPNNIVIVGTATWSQDVHEAADNQL 214
Query: 153 QDIESGSVCSHDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPE 212
D + + + L D + G +S++ VF+ E
Sbjct: 215 DDPNVMY--AFHFYAGTHGQQLRN----QVDYALSRGAAIFVSEWGTSAATGDGGVFLDE 268
Query: 213 Y--WPDF 217
W DF
Sbjct: 269 AQVWIDF 275
>gi|225560166|gb|EEH08448.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 387
Score = 35.3 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 7/66 (10%)
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS-------RELFFHALNQYNLR 232
DPDL++ G RL + WQ+ +E + + + F L +Y
Sbjct: 322 SDPDLLMVFGPFVRLDGYPPWQLRLTEIYCTGDKGSLITGGGEAVEYQKFLKGLWRYARA 381
Query: 233 DRRFGG 238
+ RFG
Sbjct: 382 EMRFGR 387
>gi|154288124|ref|XP_001544857.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150408498|gb|EDN04039.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 386
Score = 35.3 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 7/66 (10%)
Query: 180 PDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFS-------RELFFHALNQYNLR 232
DPDL++ G RL + WQ+ +E + + + F L +Y
Sbjct: 321 SDPDLLMVFGPFVRLDGYPPWQLRLTEIYCTGDKGSLITGGGEAVEYQKFLKGLWRYARA 380
Query: 233 DRRFGG 238
+ RFG
Sbjct: 381 EMRFGR 386
>gi|154151593|ref|YP_001405211.1| aminotransferase, class V [Candidatus Methanoregula boonei 6A8]
gi|154000145|gb|ABS56568.1| aminotransferase, class V [Methanoregula boonei 6A8]
Length = 880
Score = 35.3 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 42/237 (17%), Positives = 81/237 (34%), Gaps = 45/237 (18%)
Query: 24 WAAARGLPRCAGHRKGIEVFN----EIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELV 79
+A +GLP HR G+ + ++ + GI + P E E V
Sbjct: 416 YAKKKGLPEAF-HRWGLWRWKALPPKMRELCRDRGIPVREDYTLQAE----PPDEHEETV 470
Query: 80 KLI-KSFLKKGFYSLKKNNIKVRVI-------GNRLSL--------DDDILCVLKEAEDQ 123
++ + L+ + V I G+ + L + ++ + E E +
Sbjct: 471 EIAGERTLEPDMAAGTDGGYDVEAIRRDFPILGDLIYLDNAATSFSPEPVIAAMVEFEHR 530
Query: 124 TRLNTGLNLFIAFN------YSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177
R N G + + + ++++ I + + V+ ++A+ L
Sbjct: 531 YRANVGRGIHRLTGIASQRYWHAHEKVADFIGGKDGVVVFTRNTTESVN--MVAQGLPWK 588
Query: 178 DVPDPDLIIRTGGEKRLSDFLLW-----QVAYSEFV-FIPEYWPDFSRELFFHALNQ 228
D +I T E S+ L W Q +E V P+Y PD A+ +
Sbjct: 589 AG---DRVITTILEHH-SNLLPWRRLARQGVTTEIVGIGPDYQPDL--AALERAVTE 639
>gi|327303744|ref|XP_003236564.1| hypothetical protein TERG_03607 [Trichophyton rubrum CBS 118892]
gi|326461906|gb|EGD87359.1| hypothetical protein TERG_03607 [Trichophyton rubrum CBS 118892]
Length = 348
Score = 34.9 bits (79), Expect = 9.0, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVF----IPEYWPDFSRELFFHALNQYNLRDR 234
+R GG+ LS LW++ Y F F + +W D ++ L +Y R R
Sbjct: 114 LRPGGQGFLS--WLWELIYVAFFFGWFCLACFWIDARKDDQLETLEEYFNRVR 164
>gi|326469756|gb|EGD93765.1| hypothetical protein TESG_01300 [Trichophyton tonsurans CBS 112818]
Length = 492
Score = 34.9 bits (79), Expect = 9.6, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Query: 186 IRTGGEKRLSDFLLWQVAYSEFVF----IPEYWPDFSRELFFHALNQYNLRDR 234
+R GG+ LS LW++ Y F F + +W D ++ L +Y R R
Sbjct: 152 LRPGGQGFLS--WLWELIYVAFFFGWFSLACFWIDARKDDQLETLEEYFNRVR 202
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.315 0.146 0.483
Lambda K H
0.267 0.0447 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,713,296,658
Number of Sequences: 14124377
Number of extensions: 197821365
Number of successful extensions: 517271
Number of sequences better than 10.0: 3177
Number of HSP's better than 10.0 without gapping: 6050
Number of HSP's successfully gapped in prelim test: 213
Number of HSP's that attempted gapping in prelim test: 506045
Number of HSP's gapped (non-prelim): 6562
length of query: 243
length of database: 4,842,793,630
effective HSP length: 135
effective length of query: 108
effective length of database: 2,936,002,735
effective search space: 317088295380
effective search space used: 317088295380
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.4 bits)
S2: 79 (34.9 bits)