HHsearch alignment for GI: 254780776 and conserved domain: TIGR00496
>TIGR00496 frr ribosome recycling factor; InterPro: IPR002661 The ribosome recycling factor or ribosome release factor (RRF) dissociates ribosomes from mRNA after termination of translation, and is essential for bacterial growth . Thus ribosomes are 'recycled' and ready for another round of protein synthesis.; GO: 0006412 translation.
Probab=100.00 E-value=0 Score=433.94 Aligned_cols=176 Identities=47% Similarity=0.751 Sum_probs=174.2
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCHHHHCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEECC-HHHHHHHHHHHHCCCCC
Q ss_conf 99999999999999753138888967824507885586423998765120578389899659-67899999996317889
Q gi|254780776|r 11 KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD-KEMVASVERGIHESNLG 89 (186)
Q Consensus 11 ~~~m~~~i~~l~~el~~irtGrasp~lld~i~V~~~g~~~pL~~lA~Is~~~~~~l~I~~~D-~~~ik~I~kAI~~s~l~ 89 (186)
T Consensus 1 k~~M~K~~~al~~~~~tiRTGR~~p~llD~i~VeYYG~~TPL~qLa~i~~~dar~l~I~PfD~k~~~~~IE~aI~~adLG 80 (177)
T TIGR00496 1 KEKMDKSIQALKRELSTIRTGRANPSLLDRILVEYYGARTPLNQLASITVPDARTLVIKPFDVKSLINAIEKAILRADLG 80 (177)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCHHHCCEEEEECCCCCHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCC
T ss_conf 91567999998645644202467800017104651588203452140101898567763022225306899999860688
Q ss_pred CCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 98454773478861555689999999999998889999999999999999998753589997899888999999999999
Q gi|254780776|r 90 LNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTI 169 (186)
Q Consensus 90 l~p~~dg~~I~i~iP~lT~E~R~~lvK~~k~~~E~~K~~iR~iR~~~~~~ikk~~k~~~iseD~~~~~~~~iq~lt~~~~ 169 (186)
T Consensus 81 l~P~~DG~~IR~~~PplT~ErRke~~K~aKk~~E~~kvavRNvRrDand~vKkleKd~eisED~~~~~~e~iQK~TD~yi 160 (177)
T TIGR00496 81 LNPNNDGEVIRINFPPLTEERRKELVKVAKKIAEQAKVAVRNVRRDANDKVKKLEKDKEISEDEERKLQEEIQKITDEYI 160 (177)
T ss_pred CCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHEEEEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 77778876210258898746678778887643210133552002647889998524788880045655778742648888
Q ss_pred HHHHHHHHHHHHHHHCC
Q ss_conf 99999999999887449
Q gi|254780776|r 170 KNIDSFFEEKKKEIMHF 186 (186)
Q Consensus 170 ~~id~~~~~Kekell~~ 186 (186)
T Consensus 161 kkid~~~~~KE~ei~~v 177 (177)
T TIGR00496 161 KKIDEILKDKEKEILEV 177 (177)
T ss_pred HHHHHHHHHHHHHHHCC
T ss_conf 99999999889987229