HHsearch alignment of GI: 254780776 and MMDB domain: 1is1_A_1-32_105-185
>1is1_A (A:1-32,A:105-185) Ribosome recycling factor; translation; 2.20A {Vibrio parahaemolyticus}
Probab=99.90 E-value=2.4e-22 Score=173.87 Aligned_cols=111 Identities=40% Similarity=0.600 Sum_probs=106.6
Q ss_pred CHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHH
Q ss_conf 42007899999999999999999753138888967824507885586423998765120578389899659678999999
Q gi|254780776|r 2 NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVER 81 (186)
Q Consensus 2 ~e~~dl~~~~~~m~~~i~~l~~el~~irtGrasp~lld~i~V~~~g~~~pL~~lA~Is~~~~~~l~I~~~D~~~ik~I~k 81 (186)
||| +.+++.+|+++++.++.+|+++|||||
T Consensus 3 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------------ 32 (113)
T 1is1_A 3 NEI--KKDAQERMDKSVEALKNNLSKVRTGRA------------------------------------------------ 32 (113)
T ss_dssp HHH--HHHHHHHHHHHHHHHHHHHTTSCCSSC------------------------------------------------
T ss_pred HHH--HHHHHHHHHHHHHHHHHHHHHHHCCCC------------------------------------------------
T ss_conf 889--999999999999999999987613899------------------------------------------------
Q ss_pred HHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 96317889984547734788615556899999999999988899999999999999999987535899978998889999
Q gi|254780776|r 82 GIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDI 161 (186)
Q Consensus 82 AI~~s~l~l~p~~dg~~I~i~iP~lT~E~R~~lvK~~k~~~E~~K~~iR~iR~~~~~~ikk~~k~~~iseD~~~~~~~~i 161 (186)
||+|+|++|+|.|++++|+||++||++||++++.++++++.+++|||+.++++++|
T Consensus 33 ------------------------LTeErRkeLvK~aKk~~E~aKvsIRnIRrda~~~iKk~kK~~~isEDd~k~~ekeI 88 (113)
T 1is1_A 33 ------------------------LTEERRKDLVKIVRGEAEGGRVAVRNIRRDANNDLKALLKDKEISEDEDRKAQEEI 88 (113)
T ss_dssp ------------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHH
T ss_pred ------------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
T ss_conf ------------------------88999999999999999999999999999999999875323899877888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 9999999999999999999887449
Q gi|254780776|r 162 QKITDSTIKNIDSFFEEKKKEIMHF 186 (186)
Q Consensus 162 q~lt~~~~~~id~~~~~Kekell~~ 186 (186)
|++||+|++++|.+++.||+|||++
T Consensus 89 QklTdkyi~~iD~l~k~KEKEIl~V 113 (113)
T 1is1_A 89 QKLTDVAVKKIDEVLAAKEKELMEV 113 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 9999999999999999999986549