HHsearch alignment of GI: 254780776 and MMDB domain: 1is1_A_1-32_105-185

>1is1_A (A:1-32,A:105-185) Ribosome recycling factor; translation; 2.20A {Vibrio parahaemolyticus}
Probab=99.90  E-value=2.4e-22  Score=173.87  Aligned_cols=111  Identities=40%  Similarity=0.600  Sum_probs=106.6

Q ss_pred             CHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHH
Q ss_conf             42007899999999999999999753138888967824507885586423998765120578389899659678999999
Q gi|254780776|r    2 NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVER   81 (186)
Q Consensus         2 ~e~~dl~~~~~~m~~~i~~l~~el~~irtGrasp~lld~i~V~~~g~~~pL~~lA~Is~~~~~~l~I~~~D~~~ik~I~k   81 (186)
                      |||  +.+++.+|+++++.++.+|+++|||||                                                
T Consensus         3 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------------   32 (113)
T 1is1_A            3 NEI--KKDAQERMDKSVEALKNNLSKVRTGRA------------------------------------------------   32 (113)
T ss_dssp             HHH--HHHHHHHHHHHHHHHHHHHTTSCCSSC------------------------------------------------
T ss_pred             HHH--HHHHHHHHHHHHHHHHHHHHHHHCCCC------------------------------------------------
T ss_conf             889--999999999999999999987613899------------------------------------------------


Q ss_pred             HHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf             96317889984547734788615556899999999999988899999999999999999987535899978998889999
Q gi|254780776|r   82 GIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDI  161 (186)
Q Consensus        82 AI~~s~l~l~p~~dg~~I~i~iP~lT~E~R~~lvK~~k~~~E~~K~~iR~iR~~~~~~ikk~~k~~~iseD~~~~~~~~i  161 (186)
                                              ||+|+|++|+|.|++++|+||++||++||++++.++++++.+++|||+.++++++|
T Consensus        33 ------------------------LTeErRkeLvK~aKk~~E~aKvsIRnIRrda~~~iKk~kK~~~isEDd~k~~ekeI   88 (113)
T 1is1_A           33 ------------------------LTEERRKDLVKIVRGEAEGGRVAVRNIRRDANNDLKALLKDKEISEDEDRKAQEEI   88 (113)
T ss_dssp             ------------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHH
T ss_pred             ------------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
T ss_conf             ------------------------88999999999999999999999999999999999875323899877888999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             9999999999999999999887449
Q gi|254780776|r  162 QKITDSTIKNIDSFFEEKKKEIMHF  186 (186)
Q Consensus       162 q~lt~~~~~~id~~~~~Kekell~~  186 (186)
                      |++||+|++++|.+++.||+|||++
T Consensus        89 QklTdkyi~~iD~l~k~KEKEIl~V  113 (113)
T 1is1_A           89 QKLTDVAVKKIDEVLAAKEKELMEV  113 (113)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             9999999999999999999986549