HHsearch results for GI: 254780776 and protein with PDBid: 1dd5_A
>1dd5_A Ribosome recycling factor; three-helix bundle, beta-alpha-beta sandwich; 2.55A {Thermotoga maritima} SCOP: d.67.3.1 PDB: 1t1m_C
Probab=100.00 E-value=0 Score=400.71 Aligned_cols=184 Identities=41% Similarity=0.709 Sum_probs=180.6
Q ss_pred CCHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHH
Q ss_conf 94200789999999999999999975313888896782450788558642399876512057838989965967899999
Q gi|254780776|r 1 MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVE 80 (186)
Q Consensus 1 ~~e~~dl~~~~~~m~~~i~~l~~el~~irtGrasp~lld~i~V~~~g~~~pL~~lA~Is~~~~~~l~I~~~D~~~ik~I~ 80 (186)
|+++ +++++++|++++++|+.+|+++|+||+||++||+|+|++||+++||++||+|++++|++|+|+||||+++++|+
T Consensus 2 ~~~~--~~~~~~km~~~i~~l~~~l~~irtGrasp~lld~i~V~~~g~~~pL~~lA~Is~~~~~~l~I~~~D~~~v~~I~ 79 (185)
T 1dd5_A 2 VNPF--IKEAKEKMKRTLEKIEDELRKMRTGKPSPAILEEIKVDYYGVPTPVNQLATISISEERTLVIKPWDKSVLSLIE 79 (185)
T ss_dssp CCHH--HHHHHHHHHHHHHHHHHHHHHSCCSSCCGGGGTTCEEEETTEEEEGGGSEEEEECSTTEEEEEESSTTHHHHHH
T ss_pred CHHH--HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCEEEEECCCCCCHHHHHEEEECCCCEEEEECCCHHHHHHHH
T ss_conf 2789--99999999999999999998874189997995783785489876388831145078735765225232379999
Q ss_pred HHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf 99631788998454773478861555689999999999998889999999999999999998753589997899888999
Q gi|254780776|r 81 RGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLEND 160 (186)
Q Consensus 81 kAI~~s~l~l~p~~dg~~I~i~iP~lT~E~R~~lvK~~k~~~E~~K~~iR~iR~~~~~~ikk~~k~~~iseD~~~~~~~~ 160 (186)
+||++||||+||+++|++|+||||+||+|+|++++|.||+.+|+||++||++|++++++++++++.+++|||+.++++++
T Consensus 80 kAI~~s~l~l~p~~dg~~i~v~iP~~T~E~R~elvK~~k~~~E~aK~~iR~iR~~~~~~ik~~~k~~~iseD~~~~~~~~ 159 (185)
T 1dd5_A 80 KAINASDLGLNPINDGNVIRLVFPSPTTEQREKWVKKAKEIVEEGKIAIRNIRREILKKIKEDQKEGLIPEDDAKRLENE 159 (185)
T ss_dssp HHHHHSSSCCCCEECSSCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHH
T ss_pred HHHHHCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
T ss_conf 99986778999777898776208976699999999999999999999999999999999998764389986588899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999999999999999887449
Q gi|254780776|r 161 IQKITDSTIKNIDSFFEEKKKEIMHF 186 (186)
Q Consensus 161 iq~lt~~~~~~id~~~~~Kekell~~ 186 (186)
||++||+|++++|++++.||+|||+|
T Consensus 160 iq~ltd~~~~~id~~~~~KekEil~~ 185 (185)
T 1dd5_A 160 IQKLTDEFIEKLDEVFEIKKEEIMEF 185 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999999997379