HHsearch results for GI: 254780776 and protein with PDBid: 1dd5_A

>1dd5_A Ribosome recycling factor; three-helix bundle, beta-alpha-beta sandwich; 2.55A {Thermotoga maritima} SCOP: d.67.3.1 PDB: 1t1m_C
Probab=100.00  E-value=0  Score=400.71  Aligned_cols=184  Identities=41%  Similarity=0.709  Sum_probs=180.6

Q ss_pred             CCHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHH
Q ss_conf             94200789999999999999999975313888896782450788558642399876512057838989965967899999
Q gi|254780776|r    1 MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVE   80 (186)
Q Consensus         1 ~~e~~dl~~~~~~m~~~i~~l~~el~~irtGrasp~lld~i~V~~~g~~~pL~~lA~Is~~~~~~l~I~~~D~~~ik~I~   80 (186)
                      |+++  +++++++|++++++|+.+|+++|+||+||++||+|+|++||+++||++||+|++++|++|+|+||||+++++|+
T Consensus         2 ~~~~--~~~~~~km~~~i~~l~~~l~~irtGrasp~lld~i~V~~~g~~~pL~~lA~Is~~~~~~l~I~~~D~~~v~~I~   79 (185)
T 1dd5_A            2 VNPF--IKEAKEKMKRTLEKIEDELRKMRTGKPSPAILEEIKVDYYGVPTPVNQLATISISEERTLVIKPWDKSVLSLIE   79 (185)
T ss_dssp             CCHH--HHHHHHHHHHHHHHHHHHHHHSCCSSCCGGGGTTCEEEETTEEEEGGGSEEEEECSTTEEEEEESSTTHHHHHH
T ss_pred             CHHH--HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCEEEEECCCCCCHHHHHEEEECCCCEEEEECCCHHHHHHHH
T ss_conf             2789--99999999999999999998874189997995783785489876388831145078735765225232379999


Q ss_pred             HHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf             99631788998454773478861555689999999999998889999999999999999998753589997899888999
Q gi|254780776|r   81 RGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLEND  160 (186)
Q Consensus        81 kAI~~s~l~l~p~~dg~~I~i~iP~lT~E~R~~lvK~~k~~~E~~K~~iR~iR~~~~~~ikk~~k~~~iseD~~~~~~~~  160 (186)
                      +||++||||+||+++|++|+||||+||+|+|++++|.||+.+|+||++||++|++++++++++++.+++|||+.++++++
T Consensus        80 kAI~~s~l~l~p~~dg~~i~v~iP~~T~E~R~elvK~~k~~~E~aK~~iR~iR~~~~~~ik~~~k~~~iseD~~~~~~~~  159 (185)
T 1dd5_A           80 KAINASDLGLNPINDGNVIRLVFPSPTTEQREKWVKKAKEIVEEGKIAIRNIRREILKKIKEDQKEGLIPEDDAKRLENE  159 (185)
T ss_dssp             HHHHHSSSCCCCEECSSCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHH
T ss_pred             HHHHHCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
T ss_conf             99986778999777898776208976699999999999999999999999999999999998764389986588899999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             99999999999999999999887449
Q gi|254780776|r  161 IQKITDSTIKNIDSFFEEKKKEIMHF  186 (186)
Q Consensus       161 iq~lt~~~~~~id~~~~~Kekell~~  186 (186)
                      ||++||+|++++|++++.||+|||+|
T Consensus       160 iq~ltd~~~~~id~~~~~KekEil~~  185 (185)
T 1dd5_A          160 IQKLTDEFIEKLDEVFEIKKEEIMEF  185 (185)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             99999999999999999999997379