HHsearch results for GI: 254780776 and protein with PDBid: 1ge9_A

>1ge9_A Ribosome recycling factor; three-helix bundle; NMR {Aquifex aeolicus} SCOP: d.67.3.1
Probab=100.00  E-value=0  Score=375.80  Aligned_cols=175  Identities=36%  Similarity=0.656  Sum_probs=170.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCC
Q ss_conf             89999999999999999975313888896782450788558642399876512057838989965967899999996317
Q gi|254780776|r    7 LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHES   86 (186)
Q Consensus         7 l~~~~~~m~~~i~~l~~el~~irtGrasp~lld~i~V~~~g~~~pL~~lA~Is~~~~~~l~I~~~D~~~ik~I~kAI~~s   86 (186)
                      +++++++|+++++||+.+|+++|+||+||++||+|+|+|||+++||++||+|++++|++|+|+|||++.+++|++|| .|
T Consensus         9 ~~~~~~~m~k~i~~l~~el~~irtGRa~p~ild~i~V~~~g~~~pL~~lA~Isv~~~~~l~i~~~D~~~v~~I~kAi-~s   87 (184)
T 1ge9_A            9 FKEAEKDMKKAVEYYKNEIAGLRTSRASTALVEEIKVEYYGSKVPIKQLGTISVPEHNQIVIQVWDQNAVPAIEKAI-RE   87 (184)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSCCSSCCTTTCSCCCEESSSCEECTTTTCEEECSSSSEEEEECSSSSHHHHHHHHH-HH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCEEEEECCCCCCHHHHHHEECCCCCEEEEECCCHHHHHHHHHHH-HH
T ss_conf             99999999999999999998772378997881874886489855287731222278867998526242289999999-85


Q ss_pred             CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             88998454773478861555689999999999998889999999999999999998753589997899888999999999
Q gi|254780776|r   87 NLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITD  166 (186)
Q Consensus        87 ~l~l~p~~dg~~I~i~iP~lT~E~R~~lvK~~k~~~E~~K~~iR~iR~~~~~~ikk~~k~~~iseD~~~~~~~~iq~lt~  166 (186)
                      +||+||+++|+.|+||||+||+|+|++++|.||+.+|+||++||++|+++++++|+++   ++|||+.++++++||++||
T Consensus        88 ~l~l~p~~~g~~Irv~iP~lT~E~R~~l~K~ak~~~E~aK~~iR~iR~~~~~~lKk~~---~iseD~~k~~~~~iq~ltd  164 (184)
T 1ge9_A           88 ELNLNPTVQGNVIRVTLPPLTEERRRELVRLLHKITEEARVRVRNVRREAKEMIEELE---GISEDEKKRALERLQKLTD  164 (184)
T ss_dssp             HHCSCCEEETTEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHST---TCCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHH
T ss_conf             4799978889722046886449999999999888699999999998799999888753---7987888889999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHC
Q ss_conf             9999999999999988744
Q gi|254780776|r  167 STIKNIDSFFEEKKKEIMH  185 (186)
Q Consensus       167 ~~~~~id~~~~~Kekell~  185 (186)
                      +|++++|++++.||||||+
T Consensus       165 ~~~~~id~~~~~KekEll~  183 (184)
T 1ge9_A          165 KYIDEINKLMEAKEKEIMS  183 (184)
T ss_dssp             HHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHCC
T ss_conf             9999999999999998636