HHsearch results for GI: 254780776 and protein with PDBid: 1ge9_A
>1ge9_A Ribosome recycling factor; three-helix bundle; NMR {Aquifex aeolicus} SCOP: d.67.3.1
Probab=100.00 E-value=0 Score=375.80 Aligned_cols=175 Identities=36% Similarity=0.656 Sum_probs=170.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCC
Q ss_conf 89999999999999999975313888896782450788558642399876512057838989965967899999996317
Q gi|254780776|r 7 LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHES 86 (186)
Q Consensus 7 l~~~~~~m~~~i~~l~~el~~irtGrasp~lld~i~V~~~g~~~pL~~lA~Is~~~~~~l~I~~~D~~~ik~I~kAI~~s 86 (186)
+++++++|+++++||+.+|+++|+||+||++||+|+|+|||+++||++||+|++++|++|+|+|||++.+++|++|| .|
T Consensus 9 ~~~~~~~m~k~i~~l~~el~~irtGRa~p~ild~i~V~~~g~~~pL~~lA~Isv~~~~~l~i~~~D~~~v~~I~kAi-~s 87 (184)
T 1ge9_A 9 FKEAEKDMKKAVEYYKNEIAGLRTSRASTALVEEIKVEYYGSKVPIKQLGTISVPEHNQIVIQVWDQNAVPAIEKAI-RE 87 (184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCCSSCCTTTCSCCCEESSSCEECTTTTCEEECSSSSEEEEECSSSSHHHHHHHHH-HH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCEEEEECCCCCCHHHHHHEECCCCCEEEEECCCHHHHHHHHHHH-HH
T ss_conf 99999999999999999998772378997881874886489855287731222278867998526242289999999-85
Q ss_pred CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 88998454773478861555689999999999998889999999999999999998753589997899888999999999
Q gi|254780776|r 87 NLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITD 166 (186)
Q Consensus 87 ~l~l~p~~dg~~I~i~iP~lT~E~R~~lvK~~k~~~E~~K~~iR~iR~~~~~~ikk~~k~~~iseD~~~~~~~~iq~lt~ 166 (186)
+||+||+++|+.|+||||+||+|+|++++|.||+.+|+||++||++|+++++++|+++ ++|||+.++++++||++||
T Consensus 88 ~l~l~p~~~g~~Irv~iP~lT~E~R~~l~K~ak~~~E~aK~~iR~iR~~~~~~lKk~~---~iseD~~k~~~~~iq~ltd 164 (184)
T 1ge9_A 88 ELNLNPTVQGNVIRVTLPPLTEERRRELVRLLHKITEEARVRVRNVRREAKEMIEELE---GISEDEKKRALERLQKLTD 164 (184)
T ss_dssp HHCSCCEEETTEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHST---TCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHH
T ss_conf 4799978889722046886449999999999888699999999998799999888753---7987888889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHC
Q ss_conf 9999999999999988744
Q gi|254780776|r 167 STIKNIDSFFEEKKKEIMH 185 (186)
Q Consensus 167 ~~~~~id~~~~~Kekell~ 185 (186)
+|++++|++++.||||||+
T Consensus 165 ~~~~~id~~~~~KekEll~ 183 (184)
T 1ge9_A 165 KYIDEINKLMEAKEKEIMS 183 (184)
T ss_dssp HHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHCC
T ss_conf 9999999999999998636