HHSEARCH alignment of GI: 254780776 and SCOP domain: d1eh1a_

Alignment
>d1eh1a_ d.67.3.1 (A:) Ribosome recycling factor, RRF {Thermus thermophilus [TaxId: 274]}
Probab=100.00  E-value=0  Score=394.21  Aligned_cols=181  Identities=43%  Similarity=0.716  Sum_probs=177.8

Q ss_pred             CHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHH
Q ss_conf             42007899999999999999999753138888967824507885586423998765120578389899659678999999
Q gi|254780776|r    2 NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVER   81 (186)
Q Consensus         2 ~e~~dl~~~~~~m~~~i~~l~~el~~irtGrasp~lld~i~V~~~g~~~pL~~lA~Is~~~~~~l~I~~~D~~~ik~I~k   81 (186)
                      +++  +++++++|++++++|+.+|+++|+||+||++||+|+|+|||+++||++||+|++++|++|+|+|||++++++|++
T Consensus         4 ~~~--~~~~~~~M~k~i~~l~~~l~~irtGra~p~lld~i~V~~~g~~~pL~~lA~Isv~~~~~l~I~~~D~~~v~~I~k   81 (185)
T d1eh1a_           4 KEL--YAETRSHMQKSLEVLEHNLAGLRTGRANPALLLHLKVEYYGAHVPLNQIATVTAPDPRTLVVQSWDQNALKAIEK   81 (185)
T ss_dssp             HHH--HHHHHHHHHHHHHHHHHHHHTSCCSSCCSGGGTSCEEEETTEEEEGGGTCEEECSSTTEEEEECSSHHHHHHHHH
T ss_pred             HHH--HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEEEECCCCCCHHHHHHHCCCCCCEEEEECCCHHHHHHHHH
T ss_conf             999--999999999999999999987632889978808738855899511888864013886457740551678999999


Q ss_pred             HHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf             96317889984547734788615556899999999999988899999999999999999987535899978998889999
Q gi|254780776|r   82 GIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDI  161 (186)
Q Consensus        82 AI~~s~l~l~p~~dg~~I~i~iP~lT~E~R~~lvK~~k~~~E~~K~~iR~iR~~~~~~ikk~~k~~~iseD~~~~~~~~i  161 (186)
                      ||++||||+||+++|++|+||||+||+|+|++++|.||+.+|+||++||++|++++++++++++.+++|||+.++++++|
T Consensus        82 AI~~s~l~l~p~~dg~~Irv~iP~lT~E~R~elvK~~k~~~E~akv~iR~iR~~~~~~ikk~~k~~~iseD~~k~~~~ei  161 (185)
T d1eh1a_          82 AIRDSDLGLNPSNKGDALYINIPPLTEERRKDLVRAVRQYAEEGRVAIRNIRREALDKLKKLAKELHLSEDETKRAEAEI  161 (185)
T ss_dssp             HHSSSTTCCCEEEETTEEEEECCCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred             HHHHCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf             99866765566667654320678776999999999999999999999999999999998731035898877898899999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999998874
Q gi|254780776|r  162 QKITDSTIKNIDSFFEEKKKEIM  184 (186)
Q Consensus       162 q~lt~~~~~~id~~~~~Kekell  184 (186)
                      |++||+|++++|++++.||+|||
T Consensus       162 q~ltd~~~~~id~~~~~KekEil  184 (185)
T d1eh1a_         162 QKITDEFIAKADQLAEKKEQEIL  184 (185)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             99999999999999999999865


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: RRF/tRNA synthetase additional domain-like
superfamily: Ribosome recycling factor, RRF
family: Ribosome recycling factor, RRF
domain: Ribosome recycling factor, RRF
species: Thermus thermophilus [TaxId: 274]