HHSEARCH alignment of GI: 254780776 and SCOP domain: d1ge9a_

Alignment
>d1ge9a_ d.67.3.1 (A:) Ribosome recycling factor, RRF {Aquifex aeolicus [TaxId: 63363]}
Probab=100.00  E-value=0  Score=379.73  Aligned_cols=175  Identities=36%  Similarity=0.656  Sum_probs=171.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCC
Q ss_conf             89999999999999999975313888896782450788558642399876512057838989965967899999996317
Q gi|254780776|r    7 LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHES   86 (186)
Q Consensus         7 l~~~~~~m~~~i~~l~~el~~irtGrasp~lld~i~V~~~g~~~pL~~lA~Is~~~~~~l~I~~~D~~~ik~I~kAI~~s   86 (186)
                      +++++++|+++++||+.+|+++|+|||||++||+|+|+|||+++||++||+|++++|++|+|+|||++.+++|++|| .|
T Consensus         9 ~~~~~~~m~k~i~~l~~el~~irtGRasp~lld~i~V~~yg~~~pL~~lA~Is~~~~~~l~i~~~D~~~v~~IekAI-~s   87 (184)
T d1ge9a_           9 FKEAEKDMKKAVEYYKNEIAGLRTSRASTALVEEIKVEYYGSKVPIKQLGTISVPEHNQIVIQVWDQNAVPAIEKAI-RE   87 (184)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSCCSSCCTTTCSCCCEESSSCEECTTTTCEEECSSSSEEEEECSSSSHHHHHHHHH-HH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHH-HC
T ss_conf             99999999999999999998773489997883874883199730198998753277432443136577799999998-60


Q ss_pred             CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             88998454773478861555689999999999998889999999999999999998753589997899888999999999
Q gi|254780776|r   87 NLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITD  166 (186)
Q Consensus        87 ~l~l~p~~dg~~I~i~iP~lT~E~R~~lvK~~k~~~E~~K~~iR~iR~~~~~~ikk~~k~~~iseD~~~~~~~~iq~lt~  166 (186)
                      +||+||+++|++|+|||||||+|+|++++|.||+.+|+||++||++|+++++.+|+++   ++|||+.++++++||++||
T Consensus        88 ~lglnp~~~g~~Iri~iP~lT~E~R~~lvK~ak~~~E~aKv~iRniR~~~~~~lKk~k---~iseD~~k~~~~~iqkltd  164 (184)
T d1ge9a_          88 ELNLNPTVQGNVIRVTLPPLTEERRRELVRLLHKITEEARVRVRNVRREAKEMIEELE---GISEDEKKRALERLQKLTD  164 (184)
T ss_dssp             HHCSCCEEETTEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHST---TCCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHH
T ss_conf             5888877877642036775549999999999999989999999997478999988743---7987788889999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHC
Q ss_conf             9999999999999988744
Q gi|254780776|r  167 STIKNIDSFFEEKKKEIMH  185 (186)
Q Consensus       167 ~~~~~id~~~~~Kekell~  185 (186)
                      +|++++|++++.||+|||+
T Consensus       165 ~~~~~id~~~~~Kekeim~  183 (184)
T d1ge9a_         165 KYIDEINKLMEAKEKEIMS  183 (184)
T ss_dssp             HHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHCC
T ss_conf             9999999999999998626


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: RRF/tRNA synthetase additional domain-like
superfamily: Ribosome recycling factor, RRF
family: Ribosome recycling factor, RRF
domain: Ribosome recycling factor, RRF
species: Aquifex aeolicus [TaxId: 63363]