HHSEARCH alignment of GI: 254780776 and SCOP domain: d1wqga1

Alignment
>d1wqga1 d.67.3.1 (A:2-184) Ribosome recycling factor, RRF {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=100.00  E-value=0  Score=400.86  Aligned_cols=183  Identities=36%  Similarity=0.668  Sum_probs=179.7

Q ss_pred             CCHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHH
Q ss_conf             94200789999999999999999975313888896782450788558642399876512057838989965967899999
Q gi|254780776|r    1 MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVE   80 (186)
Q Consensus         1 ~~e~~dl~~~~~~m~~~i~~l~~el~~irtGrasp~lld~i~V~~~g~~~pL~~lA~Is~~~~~~l~I~~~D~~~ik~I~   80 (186)
                      |+++  +.+++++|++++++|+.+|+++|||||||++||+|+|+|||+.+||++||+|++++|++|+|+|||++++++|+
T Consensus         1 i~~~--l~~~~~kM~kai~~l~~el~~irtGRasp~lld~I~V~~yg~~~pL~~lA~Is~~~~~~l~I~p~D~~~v~~Ie   78 (183)
T d1wqga1           1 IDEA--LFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVPEARLVVIKPYEANQLRAIE   78 (183)
T ss_dssp             CHHH--HHHHHHHHHHHHHHHHHHHHTSCCSSCCGGGGTTCEEEETTEEEEGGGSEEEEEEETTEEEEEESSGGGHHHHH
T ss_pred             CHHH--HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEEECCHHHHHHHH
T ss_conf             9478--99999999999999999998873479997880884885389955078887664167655887523066699999


Q ss_pred             HHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf             99631788998454773478861555689999999999998889999999999999999998753589997899888999
Q gi|254780776|r   81 RGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLEND  160 (186)
Q Consensus        81 kAI~~s~l~l~p~~dg~~I~i~iP~lT~E~R~~lvK~~k~~~E~~K~~iR~iR~~~~~~ikk~~k~~~iseD~~~~~~~~  160 (186)
                      +||++||||+||++||+.|+|||||||+|+|++++|.||+.+|+||++||++||++++.++++++++++|+|+.++++++
T Consensus        79 kAI~~s~lglnP~~dg~~Irv~iP~lT~E~R~elvK~ak~~~E~aKv~iRniR~~~~~~lk~~~k~~~iseD~~~~~~~~  158 (183)
T d1wqga1          79 TAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHKGEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKD  158 (183)
T ss_dssp             HHHHHSTTCCCCEECSSCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHH
T ss_pred             HHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
T ss_conf             99987578899876786235443668899999999999999999999999999999999987423689986688889999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             9999999999999999999988744
Q gi|254780776|r  161 IQKITDSTIKNIDSFFEEKKKEIMH  185 (186)
Q Consensus       161 iq~lt~~~~~~id~~~~~Kekell~  185 (186)
                      ||++||+|++++|++++.||+|||+
T Consensus       159 iq~ltd~~~~~id~~~~~KekEil~  183 (183)
T d1wqga1         159 LDKTTHQYVTQIDELVKHKEGELLE  183 (183)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             9999999999999999999998609


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: RRF/tRNA synthetase additional domain-like
superfamily: Ribosome recycling factor, RRF
family: Ribosome recycling factor, RRF
domain: Ribosome recycling factor, RRF
species: Mycobacterium tuberculosis [TaxId: 1773]